Query psy4391
Match_columns 231
No_of_seqs 276 out of 1299
Neff 11.3
Searched_HMMs 29240
Date Sat Aug 17 00:22:02 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4391.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4391hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4ery_A WD repeat-containing pr 100.0 2.5E-41 8.5E-46 257.9 34.3 217 10-226 6-222 (312)
2 2ynn_A Coatomer subunit beta'; 100.0 2.5E-40 8.4E-45 251.8 31.2 211 17-227 3-217 (304)
3 3ow8_A WD repeat-containing pr 100.0 4.9E-39 1.7E-43 246.4 31.2 204 21-225 116-319 (321)
4 4gqb_B Methylosome protein 50; 100.0 7E-39 2.4E-43 247.6 32.1 206 18-225 118-329 (344)
5 3ow8_A WD repeat-containing pr 100.0 6.1E-39 2.1E-43 245.9 30.4 207 19-226 72-278 (321)
6 1vyh_C Platelet-activating fac 100.0 5.7E-39 2E-43 253.7 29.9 209 18-227 99-327 (410)
7 1vyh_C Platelet-activating fac 100.0 2.2E-38 7.4E-43 250.4 31.3 206 21-227 144-369 (410)
8 1got_B GT-beta; complex (GTP-b 100.0 9.3E-38 3.2E-42 241.1 33.0 209 16-226 44-256 (340)
9 3fm0_A Protein CIAO1; WDR39,SG 100.0 3.2E-38 1.1E-42 244.1 30.5 210 16-225 4-223 (345)
10 3frx_A Guanine nucleotide-bind 100.0 1.6E-37 5.5E-42 237.8 31.7 211 15-227 5-227 (319)
11 1got_B GT-beta; complex (GTP-b 100.0 1.8E-37 6.2E-42 239.5 32.1 205 18-224 134-340 (340)
12 3frx_A Guanine nucleotide-bind 100.0 4.4E-37 1.5E-41 235.4 33.5 205 21-226 59-316 (319)
13 2pbi_B Guanine nucleotide-bind 100.0 5.1E-37 1.8E-41 238.2 33.8 210 18-227 55-315 (354)
14 2ynn_A Coatomer subunit beta'; 100.0 2.9E-37 9.9E-42 234.8 31.7 207 20-227 48-259 (304)
15 2pbi_B Guanine nucleotide-bind 100.0 5.2E-37 1.8E-41 238.1 32.4 203 21-224 148-354 (354)
16 4g56_B MGC81050 protein; prote 100.0 1.5E-37 5E-42 241.5 29.3 204 20-225 132-341 (357)
17 2xzm_R RACK1; ribosome, transl 100.0 1.5E-36 5.1E-41 234.6 32.2 210 14-225 8-242 (343)
18 4gqb_B Methylosome protein 50; 100.0 5.9E-37 2E-41 236.8 29.7 199 26-226 81-288 (344)
19 3iz6_a 40S ribosomal protein R 100.0 5.2E-37 1.8E-41 240.3 28.7 211 16-226 55-328 (380)
20 2pm7_B Protein transport prote 100.0 2E-36 6.8E-41 229.5 28.5 205 21-226 3-237 (297)
21 2hes_X YDR267CP; beta-propelle 100.0 5.6E-36 1.9E-40 230.2 30.0 201 25-226 56-279 (330)
22 2hes_X YDR267CP; beta-propelle 100.0 1.3E-35 4.3E-40 228.3 31.4 205 18-225 5-228 (330)
23 3fm0_A Protein CIAO1; WDR39,SG 100.0 7.5E-36 2.6E-40 230.9 29.8 203 24-226 58-282 (345)
24 1nr0_A Actin interacting prote 100.0 2.9E-36 9.8E-41 249.3 29.2 205 20-226 52-269 (611)
25 1erj_A Transcriptional repress 100.0 2.4E-35 8.3E-40 231.8 32.5 200 25-226 62-286 (393)
26 3f3f_A Nucleoporin SEH1; struc 100.0 1.1E-35 3.9E-40 228.4 29.0 206 20-226 4-336 (351)
27 2pm7_B Protein transport prote 100.0 1E-35 3.4E-40 225.6 28.0 207 20-226 46-284 (297)
28 2ymu_A WD-40 repeat protein; u 100.0 2.8E-35 9.4E-40 241.5 31.1 201 19-224 377-577 (577)
29 3iz6_a 40S ribosomal protein R 100.0 4.2E-36 1.4E-40 235.1 24.7 208 20-227 150-375 (380)
30 4h5i_A Guanine nucleotide-exch 100.0 1.5E-35 5E-40 230.9 27.6 199 26-226 132-342 (365)
31 4ery_A WD repeat-containing pr 100.0 1.4E-34 4.9E-39 220.5 32.6 208 20-227 58-268 (312)
32 2xzm_R RACK1; ribosome, transl 100.0 2.1E-34 7.3E-39 222.5 33.0 203 20-226 69-284 (343)
33 1nr0_A Actin interacting prote 100.0 3.3E-35 1.1E-39 243.0 30.3 207 19-227 95-355 (611)
34 1erj_A Transcriptional repress 100.0 1.1E-34 3.6E-39 228.1 31.7 210 19-230 157-392 (393)
35 3zwl_B Eukaryotic translation 100.0 1.8E-34 6.1E-39 223.7 32.3 214 12-227 17-249 (369)
36 3bg1_A Protein SEC13 homolog; 100.0 5.8E-36 2E-40 228.8 22.5 207 20-227 6-247 (316)
37 3bg1_A Protein SEC13 homolog; 100.0 1.1E-35 3.8E-40 227.3 23.7 208 19-226 49-292 (316)
38 3jrp_A Fusion protein of prote 100.0 1.3E-34 4.4E-39 225.5 27.7 208 20-227 4-240 (379)
39 3ei3_B DNA damage-binding prot 100.0 3.9E-34 1.3E-38 223.9 30.1 207 16-226 62-281 (383)
40 3dwl_C Actin-related protein 2 100.0 2.2E-36 7.4E-41 236.0 17.2 201 25-227 9-236 (377)
41 4e54_B DNA damage-binding prot 100.0 2.7E-35 9.2E-40 234.4 23.9 209 17-226 109-326 (435)
42 3dm0_A Maltose-binding peripla 100.0 4.5E-34 1.5E-38 239.4 32.2 210 17-227 372-592 (694)
43 2aq5_A Coronin-1A; WD40 repeat 100.0 2E-34 6.8E-39 227.1 28.2 207 22-228 76-300 (402)
44 4g56_B MGC81050 protein; prote 100.0 1.2E-34 3.9E-39 225.2 26.1 203 23-227 90-301 (357)
45 4aow_A Guanine nucleotide-bind 100.0 3.2E-33 1.1E-37 214.8 32.2 212 15-227 26-246 (340)
46 3vl1_A 26S proteasome regulato 100.0 1.9E-34 6.4E-39 228.0 25.8 205 20-225 132-363 (420)
47 3vl1_A 26S proteasome regulato 100.0 1.6E-34 5.3E-39 228.4 25.0 198 29-226 99-321 (420)
48 1gxr_A ESG1, transducin-like e 100.0 5.9E-33 2E-37 212.9 32.8 203 19-225 133-335 (337)
49 3mkq_A Coatomer beta'-subunit; 100.0 4.7E-34 1.6E-38 242.7 28.4 209 18-226 4-216 (814)
50 1gxr_A ESG1, transducin-like e 100.0 1.3E-32 4.5E-37 210.9 33.8 202 23-227 93-296 (337)
51 3dm0_A Maltose-binding peripla 100.0 2.8E-33 9.7E-38 234.5 32.3 205 19-226 422-631 (694)
52 3jrp_A Fusion protein of prote 100.0 1.8E-33 6.1E-38 219.0 28.7 209 18-226 46-286 (379)
53 1k8k_C P40, ARP2/3 complex 41 100.0 2.1E-33 7.4E-38 218.3 28.8 202 25-227 6-233 (372)
54 2j04_B YDR362CP, TAU91; beta p 100.0 1.7E-34 5.7E-39 233.8 22.8 205 21-227 201-428 (524)
55 3k26_A Polycomb protein EED; W 100.0 2.4E-34 8.4E-39 222.9 21.9 206 19-226 107-365 (366)
56 2ymu_A WD-40 repeat protein; u 100.0 6.2E-33 2.1E-37 227.6 31.2 200 21-225 338-537 (577)
57 3dwl_C Actin-related protein 2 100.0 1.9E-34 6.3E-39 225.1 21.1 204 19-225 47-279 (377)
58 1k8k_C P40, ARP2/3 complex 41 100.0 8.6E-33 2.9E-37 214.9 28.5 207 19-227 44-274 (372)
59 1r5m_A SIR4-interacting protei 100.0 1E-32 3.5E-37 217.6 28.9 206 19-225 141-423 (425)
60 3dw8_B Serine/threonine-protei 100.0 4.9E-33 1.7E-37 221.4 27.2 199 26-226 27-314 (447)
61 1sq9_A Antiviral protein SKI8; 100.0 5.7E-33 2E-37 217.9 26.7 207 20-227 109-395 (397)
62 3gre_A Serine/threonine-protei 100.0 1E-33 3.5E-38 225.1 22.6 211 15-226 50-291 (437)
63 2oaj_A Protein SNI1; WD40 repe 100.0 6.5E-33 2.2E-37 237.6 28.8 201 22-226 12-241 (902)
64 1sq9_A Antiviral protein SKI8; 100.0 3.1E-33 1E-37 219.4 24.3 208 19-227 54-322 (397)
65 3sfz_A APAF-1, apoptotic pepti 100.0 1.7E-32 5.8E-37 242.4 30.7 209 19-227 607-871 (1249)
66 4a11_B DNA excision repair pro 100.0 3.8E-32 1.3E-36 213.5 29.3 206 21-227 37-276 (408)
67 3mmy_A MRNA export factor; mRN 100.0 3.2E-32 1.1E-36 211.0 28.6 210 17-227 29-304 (368)
68 1r5m_A SIR4-interacting protei 100.0 8E-32 2.7E-36 212.5 31.0 198 26-226 107-360 (425)
69 2pm9_A Protein WEB1, protein t 100.0 7.8E-33 2.7E-37 218.2 24.7 208 19-227 105-337 (416)
70 3dw8_B Serine/threonine-protei 100.0 1E-32 3.6E-37 219.5 25.0 211 15-227 69-373 (447)
71 3jro_A Fusion protein of prote 100.0 7.2E-33 2.5E-37 233.9 25.4 207 21-227 3-238 (753)
72 4aow_A Guanine nucleotide-bind 100.0 5E-31 1.7E-35 202.6 33.6 208 19-226 78-336 (340)
73 2vdu_B TRNA (guanine-N(7)-)-me 100.0 3.1E-32 1E-36 217.6 27.5 201 24-225 99-337 (450)
74 3i2n_A WD repeat-containing pr 100.0 4.3E-32 1.5E-36 209.7 27.5 206 18-225 9-241 (357)
75 4e54_B DNA damage-binding prot 100.0 8.6E-33 2.9E-37 219.9 23.8 209 20-230 157-433 (435)
76 3k26_A Polycomb protein EED; W 100.0 1.5E-32 5.2E-37 212.8 24.5 203 22-226 13-259 (366)
77 4gga_A P55CDC, cell division c 100.0 1.9E-31 6.5E-36 211.3 31.2 208 21-230 141-398 (420)
78 4aez_A CDC20, WD repeat-contai 100.0 1.7E-31 6E-36 210.3 30.7 198 25-226 132-335 (401)
79 2pm9_A Protein WEB1, protein t 100.0 1.4E-32 4.9E-37 216.7 24.1 203 25-227 65-294 (416)
80 3odt_A Protein DOA1; ubiquitin 100.0 1.3E-31 4.5E-36 203.4 28.4 208 12-227 3-214 (313)
81 2w18_A PALB2, fancn, partner a 100.0 1.6E-32 5.5E-37 207.3 22.8 197 27-225 111-355 (356)
82 3zwl_B Eukaryotic translation 100.0 3.6E-31 1.2E-35 205.2 30.6 207 19-228 66-305 (369)
83 2xyi_A Probable histone-bindin 100.0 8.5E-32 2.9E-36 213.9 27.7 207 18-225 172-408 (430)
84 3ei3_B DNA damage-binding prot 100.0 4.5E-32 1.5E-36 212.2 25.6 197 25-226 161-381 (383)
85 4aez_A CDC20, WD repeat-contai 100.0 1.9E-31 6.6E-36 210.0 28.8 206 19-227 168-380 (401)
86 2xyi_A Probable histone-bindin 100.0 6.3E-32 2.2E-36 214.7 25.5 205 21-226 122-352 (430)
87 3mkq_A Coatomer beta'-subunit; 100.0 1.2E-31 4.3E-36 227.8 28.7 208 19-227 47-259 (814)
88 4a11_B DNA excision repair pro 100.0 7E-31 2.4E-35 206.2 30.4 202 25-227 97-365 (408)
89 1pgu_A Actin interacting prote 100.0 2.7E-31 9.2E-36 218.9 29.0 205 19-226 55-282 (615)
90 3v7d_B Cell division control p 100.0 9.6E-31 3.3E-35 209.4 31.1 203 19-227 154-381 (464)
91 4ggc_A P55CDC, cell division c 100.0 2.2E-30 7.4E-35 197.2 31.0 208 21-230 61-318 (318)
92 3vu4_A KMHSV2; beta-propeller 100.0 3.9E-31 1.3E-35 205.2 27.0 201 22-226 14-270 (355)
93 3jro_A Fusion protein of prote 100.0 9.2E-32 3.2E-36 227.1 25.3 209 18-226 44-284 (753)
94 3gre_A Serine/threonine-protei 100.0 4.4E-32 1.5E-36 215.7 22.0 202 25-227 109-359 (437)
95 1yfq_A Cell cycle arrest prote 100.0 1.7E-31 6E-36 205.4 24.7 201 23-228 7-226 (342)
96 3i2n_A WD repeat-containing pr 100.0 1.1E-31 3.9E-36 207.3 23.6 201 25-226 63-290 (357)
97 2aq5_A Coronin-1A; WD40 repeat 100.0 7.8E-32 2.7E-36 212.2 22.9 198 29-226 36-253 (402)
98 2j04_B YDR362CP, TAU91; beta p 100.0 2.3E-32 7.7E-37 221.4 19.2 204 21-225 260-515 (524)
99 3v7d_B Cell division control p 100.0 1.5E-30 5E-35 208.4 29.3 202 19-226 113-340 (464)
100 3odt_A Protein DOA1; ubiquitin 100.0 3.1E-30 1.1E-34 195.9 29.3 197 21-227 98-296 (313)
101 3sfz_A APAF-1, apoptotic pepti 100.0 1.9E-30 6.5E-35 229.4 31.5 206 19-225 649-911 (1249)
102 2vdu_B TRNA (guanine-N(7)-)-me 100.0 5.8E-31 2E-35 210.2 25.4 198 28-227 5-271 (450)
103 3mmy_A MRNA export factor; mRN 100.0 8.2E-31 2.8E-35 203.1 24.9 205 19-225 78-344 (368)
104 1yfq_A Cell cycle arrest prote 100.0 1.4E-30 4.8E-35 200.3 25.0 200 23-227 52-282 (342)
105 3lrv_A PRE-mRNA-splicing facto 100.0 9.1E-31 3.1E-35 202.1 23.9 194 28-225 77-290 (343)
106 1pgu_A Actin interacting prote 100.0 1.7E-30 5.7E-35 214.2 26.0 198 25-226 16-237 (615)
107 2j04_A TAU60, YPL007P, hypothe 100.0 1.1E-30 3.8E-35 208.9 23.3 191 25-225 83-295 (588)
108 4gq1_A NUP37; propeller, trans 100.0 2.8E-31 9.5E-36 208.7 19.6 201 22-224 131-386 (393)
109 2j04_A TAU60, YPL007P, hypothe 100.0 1.3E-30 4.4E-35 208.6 22.0 202 18-227 6-254 (588)
110 1p22_A F-BOX/WD-repeat protein 100.0 3E-29 1E-33 199.5 29.1 196 19-225 165-363 (435)
111 3lrv_A PRE-mRNA-splicing facto 100.0 1.5E-29 5E-34 195.4 24.7 194 25-224 123-330 (343)
112 2ovr_B FBW7, F-BOX/WD repeat p 100.0 8.8E-29 3E-33 197.3 30.0 200 20-227 232-442 (445)
113 2ovr_B FBW7, F-BOX/WD repeat p 100.0 9.6E-29 3.3E-33 197.0 28.1 196 21-227 112-308 (445)
114 1p22_A F-BOX/WD-repeat protein 100.0 1.8E-28 6.3E-33 194.9 29.2 192 25-227 131-325 (435)
115 3vu4_A KMHSV2; beta-propeller 100.0 3.3E-28 1.1E-32 188.7 27.2 197 29-226 60-335 (355)
116 2oaj_A Protein SNI1; WD40 repe 100.0 4.8E-28 1.6E-32 207.6 26.5 197 25-224 56-309 (902)
117 3f3f_A Nucleoporin SEH1; struc 100.0 6.9E-28 2.4E-32 184.9 24.7 174 18-191 48-344 (351)
118 4gq1_A NUP37; propeller, trans 100.0 9.3E-29 3.2E-33 194.3 17.6 196 32-228 94-349 (393)
119 4h5i_A Guanine nucleotide-exch 100.0 1.1E-27 3.9E-32 186.3 23.3 160 25-185 174-344 (365)
120 4gga_A P55CDC, cell division c 100.0 1.2E-26 4.2E-31 183.7 27.9 194 30-227 108-310 (420)
121 1l0q_A Surface layer protein; 100.0 4.4E-26 1.5E-30 178.5 30.5 200 21-226 26-232 (391)
122 2w18_A PALB2, fancn, partner a 100.0 2E-27 6.8E-32 179.6 19.9 162 19-182 170-355 (356)
123 1l0q_A Surface layer protein; 100.0 2.1E-25 7.1E-30 174.6 32.0 194 28-226 74-274 (391)
124 3bws_A Protein LP49; two-domai 100.0 3.9E-26 1.3E-30 181.0 27.3 201 23-227 165-390 (433)
125 3bws_A Protein LP49; two-domai 100.0 1.6E-25 5.3E-30 177.6 30.0 201 21-226 205-431 (433)
126 2hqs_A Protein TOLB; TOLB, PAL 100.0 1.3E-25 4.3E-30 177.7 29.3 199 22-226 173-386 (415)
127 4ggc_A P55CDC, cell division c 100.0 1E-25 3.6E-30 171.3 27.6 194 30-227 28-230 (318)
128 2oit_A Nucleoporin 214KDA; NH2 99.9 3.5E-25 1.2E-29 176.0 17.4 198 27-226 36-277 (434)
129 2hqs_A Protein TOLB; TOLB, PAL 99.9 9E-24 3.1E-28 167.0 22.4 202 21-227 111-344 (415)
130 2ojh_A Uncharacterized protein 99.9 5.5E-23 1.9E-27 154.3 22.6 201 23-227 37-258 (297)
131 2ecf_A Dipeptidyl peptidase IV 99.9 4.6E-23 1.6E-27 173.8 22.2 197 27-226 36-320 (741)
132 3vgz_A Uncharacterized protein 99.9 1.3E-21 4.5E-26 150.8 25.8 200 26-226 39-261 (353)
133 3u4y_A Uncharacterized protein 99.9 1.9E-21 6.4E-26 148.9 26.3 198 25-226 38-251 (331)
134 3vgz_A Uncharacterized protein 99.9 1.8E-21 6E-26 150.1 25.7 196 28-226 89-302 (353)
135 1nir_A Nitrite reductase; hemo 99.9 7.7E-22 2.6E-26 160.8 24.6 192 34-227 144-355 (543)
136 2oit_A Nucleoporin 214KDA; NH2 99.9 2.6E-22 8.9E-27 159.4 20.8 159 26-185 91-279 (434)
137 1ri6_A Putative isomerase YBHE 99.9 3.7E-21 1.3E-25 147.5 26.2 200 25-226 35-261 (343)
138 1pby_B Quinohemoprotein amine 99.9 6.2E-21 2.1E-25 146.0 25.8 192 29-227 35-310 (337)
139 1xfd_A DIP, dipeptidyl aminope 99.9 4.4E-23 1.5E-27 173.4 14.7 195 29-226 18-288 (723)
140 1ri6_A Putative isomerase YBHE 99.9 1.1E-20 3.8E-25 144.8 25.8 194 29-225 85-306 (343)
141 2ecf_A Dipeptidyl peptidase IV 99.9 4.7E-22 1.6E-26 167.7 19.2 194 29-225 110-365 (741)
142 1nir_A Nitrite reductase; hemo 99.9 1.8E-20 6.3E-25 152.7 27.8 195 30-227 181-402 (543)
143 1xfd_A DIP, dipeptidyl aminope 99.9 9.6E-22 3.3E-26 165.3 20.6 194 29-224 62-341 (723)
144 1k32_A Tricorn protease; prote 99.9 2.4E-21 8.3E-26 169.0 21.1 194 26-225 294-500 (1045)
145 2ojh_A Uncharacterized protein 99.9 3.1E-21 1E-25 144.7 18.0 189 27-218 84-293 (297)
146 3hfq_A Uncharacterized protein 99.9 5.6E-20 1.9E-24 141.8 25.1 201 25-226 37-270 (347)
147 3hfq_A Uncharacterized protein 99.9 1.6E-19 5.6E-24 139.1 27.5 200 25-225 83-315 (347)
148 2z3z_A Dipeptidyl aminopeptida 99.9 5.9E-21 2E-25 160.2 20.3 194 28-225 82-340 (706)
149 3u4y_A Uncharacterized protein 99.9 6.7E-20 2.3E-24 140.2 24.6 192 33-227 3-207 (331)
150 1jmx_B Amine dehydrogenase; ox 99.9 4.1E-20 1.4E-24 142.1 22.7 190 29-226 44-324 (349)
151 1k32_A Tricorn protease; prote 99.9 1.1E-19 3.6E-24 158.7 25.1 197 25-228 376-638 (1045)
152 2z3z_A Dipeptidyl aminopeptida 99.9 1.7E-20 5.9E-25 157.4 19.2 199 25-225 118-389 (706)
153 3scy_A Hypothetical bacterial 99.9 2.8E-18 9.5E-23 133.0 27.5 196 26-225 98-335 (361)
154 3scy_A Hypothetical bacterial 99.9 4E-18 1.4E-22 132.1 28.3 199 26-226 48-290 (361)
155 1jmx_B Amine dehydrogenase; ox 99.8 3.1E-19 1.1E-23 137.2 21.2 156 32-191 4-182 (349)
156 1z68_A Fibroblast activation p 99.8 5.7E-20 1.9E-24 154.6 17.7 188 32-224 20-284 (719)
157 1pby_B Quinohemoprotein amine 99.8 7.5E-19 2.6E-23 134.3 22.3 148 40-190 2-169 (337)
158 3o4h_A Acylamino-acid-releasin 99.8 1.4E-19 4.7E-24 148.9 18.9 192 27-227 21-227 (582)
159 1jof_A Carboxy-CIS,CIS-muconat 99.8 8.7E-19 3E-23 136.2 22.3 198 28-226 40-290 (365)
160 3o4h_A Acylamino-acid-releasin 99.8 9.1E-20 3.1E-24 149.9 16.8 192 25-225 61-274 (582)
161 1q7f_A NHL, brain tumor CG1071 99.8 3.8E-17 1.3E-21 122.6 28.5 201 26-231 75-284 (286)
162 3pe7_A Oligogalacturonate lyas 99.8 9.4E-19 3.2E-23 136.7 20.0 203 22-226 25-272 (388)
163 1z68_A Fibroblast activation p 99.8 6.9E-20 2.4E-24 154.1 13.9 193 29-225 61-344 (719)
164 4a5s_A Dipeptidyl peptidase 4 99.8 1.1E-18 3.7E-23 147.4 20.5 196 28-227 17-294 (740)
165 1jof_A Carboxy-CIS,CIS-muconat 99.8 3.2E-18 1.1E-22 133.1 21.1 197 30-226 85-340 (365)
166 3fvz_A Peptidyl-glycine alpha- 99.8 7E-17 2.4E-21 123.8 25.2 200 26-226 89-321 (329)
167 1q7f_A NHL, brain tumor CG1071 99.8 6.6E-16 2.3E-20 115.8 27.3 196 26-225 28-236 (286)
168 4a5s_A Dipeptidyl peptidase 4 99.8 1E-17 3.5E-22 141.4 19.1 194 31-226 65-352 (740)
169 3fvz_A Peptidyl-glycine alpha- 99.8 2.4E-16 8.2E-21 120.8 24.1 198 27-225 23-275 (329)
170 3azo_A Aminopeptidase; POP fam 99.8 1.4E-17 4.7E-22 138.8 18.3 190 32-224 81-320 (662)
171 3azo_A Aminopeptidase; POP fam 99.8 2.2E-17 7.6E-22 137.6 19.3 202 22-225 18-272 (662)
172 2oiz_A Aromatic amine dehydrog 99.8 3.1E-16 1E-20 121.7 23.0 191 32-228 54-335 (361)
173 3e5z_A Putative gluconolactona 99.8 4.3E-16 1.5E-20 117.5 22.9 195 25-226 25-245 (296)
174 2dg1_A DRP35, lactonase; beta 99.8 3.5E-15 1.2E-19 114.2 27.8 203 22-225 39-261 (333)
175 2xdw_A Prolyl endopeptidase; a 99.8 4.6E-16 1.6E-20 130.8 24.0 198 26-225 123-366 (710)
176 3c5m_A Oligogalacturonate lyas 99.8 7.1E-18 2.4E-22 131.8 12.1 194 30-226 38-272 (396)
177 2gop_A Trilobed protease; beta 99.7 3.7E-16 1.3E-20 120.2 20.6 182 28-223 59-288 (347)
178 1rwi_B Serine/threonine-protei 99.7 2E-15 6.8E-20 112.1 23.3 197 28-227 67-264 (270)
179 3pe7_A Oligogalacturonate lyas 99.7 6.7E-16 2.3E-20 120.5 20.7 200 25-226 78-328 (388)
180 3e5z_A Putative gluconolactona 99.7 7.7E-15 2.6E-19 110.6 24.6 193 25-225 66-284 (296)
181 1rwi_B Serine/threonine-protei 99.7 6.9E-15 2.3E-19 109.2 23.0 196 29-226 25-221 (270)
182 2z2n_A Virginiamycin B lyase; 99.7 1.4E-13 4.8E-18 103.4 30.4 202 21-225 8-211 (299)
183 3no2_A Uncharacterized protein 99.7 4.2E-15 1.4E-19 111.1 20.8 183 37-226 3-194 (276)
184 2z2n_A Virginiamycin B lyase; 99.7 2.6E-13 8.7E-18 101.9 30.7 195 26-225 55-253 (299)
185 2bkl_A Prolyl endopeptidase; m 99.7 8.1E-16 2.8E-20 129.0 18.7 196 25-225 118-347 (695)
186 3c5m_A Oligogalacturonate lyas 99.7 5.2E-16 1.8E-20 121.2 16.1 189 32-226 85-328 (396)
187 2dg1_A DRP35, lactonase; beta 99.7 3.7E-15 1.3E-19 114.1 19.3 194 28-226 6-212 (333)
188 3dsm_A Uncharacterized protein 99.7 2.6E-14 8.9E-19 109.4 22.0 195 27-226 83-301 (328)
189 1xip_A Nucleoporin NUP159; bet 99.7 2.3E-15 7.9E-20 116.8 16.2 174 29-215 39-232 (388)
190 3no2_A Uncharacterized protein 99.7 1.7E-13 5.7E-18 102.4 24.7 190 20-215 28-231 (276)
191 3dsm_A Uncharacterized protein 99.7 5.9E-14 2E-18 107.5 22.8 192 29-226 45-252 (328)
192 1yr2_A Prolyl oligopeptidase; 99.7 4.2E-14 1.4E-18 119.5 22.9 195 26-224 161-390 (741)
193 1qks_A Cytochrome CD1 nitrite 99.7 3.3E-13 1.1E-17 110.2 27.0 189 37-227 165-373 (567)
194 2qc5_A Streptogramin B lactona 99.6 4.1E-12 1.4E-16 95.4 30.9 197 25-225 59-258 (300)
195 2qc5_A Streptogramin B lactona 99.6 3.7E-12 1.3E-16 95.6 30.2 202 20-225 12-216 (300)
196 2gop_A Trilobed protease; beta 99.6 7.5E-14 2.6E-18 107.3 20.3 179 30-224 106-328 (347)
197 2xdw_A Prolyl endopeptidase; a 99.6 2.8E-13 9.5E-18 114.0 23.2 195 30-226 173-413 (710)
198 2mad_H Methylamine dehydrogena 99.6 2.6E-12 8.8E-17 100.0 26.6 189 32-227 70-350 (373)
199 3hrp_A Uncharacterized protein 99.6 1.4E-12 4.6E-17 102.8 24.5 194 28-225 131-352 (409)
200 1qks_A Cytochrome CD1 nitrite 99.6 9.3E-12 3.2E-16 101.7 28.1 196 29-227 198-421 (567)
201 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 3E-12 1E-16 96.9 23.6 195 26-225 69-297 (314)
202 3g4e_A Regucalcin; six bladed 99.6 6.2E-12 2.1E-16 94.9 24.5 186 27-216 53-261 (297)
203 2oiz_A Aromatic amine dehydrog 99.6 2.8E-13 9.7E-18 105.0 17.2 184 38-226 14-229 (361)
204 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 1.1E-11 3.9E-16 93.7 23.8 196 27-226 17-255 (314)
205 3iuj_A Prolyl endopeptidase; h 99.5 2.1E-12 7.1E-17 108.4 20.4 195 25-225 126-357 (693)
206 3g4e_A Regucalcin; six bladed 99.5 5.4E-11 1.8E-15 89.7 26.2 196 25-226 10-228 (297)
207 2bkl_A Prolyl endopeptidase; m 99.5 8.7E-13 3E-17 110.7 17.5 193 31-226 171-396 (695)
208 3dr2_A Exported gluconolactona 99.5 8.7E-12 3E-16 94.4 21.1 193 26-225 43-265 (305)
209 3hrp_A Uncharacterized protein 99.5 2.6E-11 8.9E-16 95.5 23.0 190 33-225 176-408 (409)
210 1xip_A Nucleoporin NUP159; bet 99.5 2.5E-12 8.6E-17 99.8 16.3 133 26-170 87-230 (388)
211 3c75_H MADH, methylamine dehyd 99.5 4.8E-12 1.7E-16 99.5 18.1 194 32-227 122-402 (426)
212 2iwa_A Glutamine cyclotransfer 99.5 1.5E-10 5.3E-15 85.1 24.6 205 16-226 8-236 (266)
213 2hz6_A Endoplasmic reticulum t 99.5 1.9E-14 6.5E-19 111.9 3.9 179 38-226 8-191 (369)
214 3dr2_A Exported gluconolactona 99.5 3.5E-11 1.2E-15 91.0 21.7 189 26-222 84-302 (305)
215 2ghs_A AGR_C_1268P; regucalcin 99.5 2.4E-10 8.2E-15 87.3 25.7 184 27-217 89-292 (326)
216 1yr2_A Prolyl oligopeptidase; 99.4 1.1E-11 3.6E-16 104.9 19.2 192 31-225 212-439 (741)
217 2ghs_A AGR_C_1268P; regucalcin 99.4 5.9E-10 2E-14 85.1 26.6 190 29-225 50-258 (326)
218 2qe8_A Uncharacterized protein 99.4 1.6E-11 5.6E-16 94.4 18.0 196 25-220 64-314 (343)
219 2mad_H Methylamine dehydrogena 99.4 3.7E-10 1.3E-14 87.9 24.5 184 34-225 27-241 (373)
220 3sjl_D Methylamine dehydrogena 99.4 4.1E-11 1.4E-15 92.8 18.6 187 33-225 38-254 (386)
221 3nol_A Glutamine cyclotransfer 99.4 5E-10 1.7E-14 81.6 21.6 195 16-217 30-245 (262)
222 2qe8_A Uncharacterized protein 99.4 9E-11 3.1E-15 90.3 18.8 197 28-225 17-276 (343)
223 2ece_A 462AA long hypothetical 99.4 3.7E-10 1.3E-14 88.4 21.1 188 37-225 93-350 (462)
224 1mda_H Methylamine dehydrogena 99.4 1.2E-10 4.1E-15 90.1 18.0 190 32-227 69-346 (368)
225 3c75_H MADH, methylamine dehyd 99.3 1.3E-10 4.6E-15 91.3 18.2 183 37-225 82-293 (426)
226 3mbr_X Glutamine cyclotransfer 99.3 6.2E-09 2.1E-13 75.2 24.2 197 14-217 6-224 (243)
227 3sjl_D Methylamine dehydrogena 99.3 5.5E-10 1.9E-14 86.5 19.7 191 31-227 140-363 (386)
228 3nok_A Glutaminyl cyclase; bet 99.3 7.9E-10 2.7E-14 80.6 19.4 180 29-216 56-254 (268)
229 3iuj_A Prolyl endopeptidase; h 99.2 1.2E-09 4.3E-14 91.6 19.7 190 31-225 178-403 (693)
230 2ece_A 462AA long hypothetical 99.2 3.6E-09 1.2E-13 82.9 19.3 185 30-215 140-399 (462)
231 1npe_A Nidogen, entactin; glyc 99.2 1.6E-07 5.6E-12 69.4 26.9 194 28-226 36-237 (267)
232 1npe_A Nidogen, entactin; glyc 99.1 1.8E-07 6.2E-12 69.1 25.1 184 40-225 2-196 (267)
233 1kb0_A Quinohemoprotein alcoho 99.1 1E-08 3.4E-13 85.8 20.0 182 31-213 246-536 (677)
234 1fwx_A Nitrous oxide reductase 99.1 6.8E-09 2.3E-13 84.0 18.0 185 37-225 99-359 (595)
235 3qqz_A Putative uncharacterize 99.1 5.6E-07 1.9E-11 65.8 26.8 210 13-225 9-251 (255)
236 1yiq_A Quinohemoprotein alcoho 99.1 1.6E-08 5.6E-13 84.7 20.1 182 32-214 239-536 (689)
237 2fp8_A Strictosidine synthase; 99.1 1.5E-07 5.2E-12 71.5 22.8 193 28-225 19-267 (322)
238 2hz6_A Endoplasmic reticulum t 99.1 3.8E-11 1.3E-15 93.3 2.3 173 29-209 39-216 (369)
239 3hxj_A Pyrrolo-quinoline quino 99.1 3.4E-08 1.2E-12 75.0 18.6 186 28-225 137-322 (330)
240 1kb0_A Quinohemoprotein alcoho 99.0 2.3E-08 7.9E-13 83.6 17.6 178 48-227 189-507 (677)
241 2p4o_A Hypothetical protein; p 99.0 1.5E-06 5.2E-11 65.5 26.1 192 28-225 32-240 (306)
242 2xe4_A Oligopeptidase B; hydro 99.0 7.3E-08 2.5E-12 81.6 20.6 191 29-223 175-394 (751)
243 1fwx_A Nitrous oxide reductase 99.0 2.8E-08 9.5E-13 80.5 16.2 186 28-216 134-407 (595)
244 1yiq_A Quinohemoprotein alcoho 99.0 9.5E-08 3.2E-12 80.1 19.3 178 48-227 182-505 (689)
245 3hxj_A Pyrrolo-quinoline quino 99.0 9E-08 3.1E-12 72.6 17.7 176 39-225 107-282 (330)
246 2fp8_A Strictosidine synthase; 99.0 1E-06 3.5E-11 66.9 23.1 192 29-226 81-312 (322)
247 3q7m_A Lipoprotein YFGL, BAMB; 98.9 4.3E-07 1.5E-11 70.4 20.6 179 39-225 188-376 (376)
248 2iwa_A Glutamine cyclotransfer 98.9 8.6E-07 2.9E-11 65.2 19.8 150 72-227 23-181 (266)
249 3q7m_A Lipoprotein YFGL, BAMB; 98.9 1E-06 3.4E-11 68.3 20.7 183 38-225 52-256 (376)
250 3v64_C Agrin; beta propeller, 98.9 6.9E-06 2.4E-10 63.2 24.9 194 29-224 74-272 (349)
251 3v65_B Low-density lipoprotein 98.8 9.7E-06 3.3E-10 63.3 24.0 196 28-225 116-316 (386)
252 3nok_A Glutaminyl cyclase; bet 98.8 8E-07 2.7E-11 64.9 15.6 149 72-227 57-210 (268)
253 3nol_A Glutamine cyclotransfer 98.8 9.8E-07 3.3E-11 64.4 16.0 149 72-226 45-200 (262)
254 1kv9_A Type II quinohemoprotei 98.7 1.1E-06 3.6E-11 73.6 18.1 183 32-215 234-520 (668)
255 3tc9_A Hypothetical hydrolase; 98.7 4.6E-06 1.6E-10 66.0 20.6 152 29-183 138-300 (430)
256 1ijq_A LDL receptor, low-densi 98.7 3.1E-05 1E-09 58.7 28.0 196 28-226 30-237 (316)
257 1mda_H Methylamine dehydrogena 98.7 1.6E-07 5.4E-12 72.7 11.5 162 50-225 47-238 (368)
258 1ijq_A LDL receptor, low-densi 98.7 3.4E-05 1.2E-09 58.5 25.5 176 48-225 9-193 (316)
259 3v64_C Agrin; beta propeller, 98.7 3.9E-05 1.3E-09 59.0 24.8 192 30-225 36-232 (349)
260 3mbr_X Glutamine cyclotransfer 98.7 7E-06 2.4E-10 59.3 18.7 149 72-226 23-178 (243)
261 2p4o_A Hypothetical protein; p 98.7 3.8E-05 1.3E-09 57.8 23.3 186 28-217 72-278 (306)
262 3p5b_L Low density lipoprotein 98.7 6.6E-05 2.3E-09 58.8 27.5 196 28-225 112-318 (400)
263 2p9w_A MAL S 1 allergenic prot 98.6 4.3E-05 1.5E-09 57.7 22.4 159 25-184 10-215 (334)
264 3amr_A 3-phytase; beta-propell 98.6 2.7E-05 9.2E-10 59.3 21.5 184 38-226 39-262 (355)
265 3tc9_A Hypothetical hydrolase; 98.6 3.6E-06 1.2E-10 66.6 17.6 152 72-226 139-300 (430)
266 4hw6_A Hypothetical protein, I 98.6 1.4E-05 4.6E-10 63.4 20.6 195 29-225 140-372 (433)
267 1kv9_A Type II quinohemoprotei 98.6 3E-06 1E-10 70.9 17.2 178 48-227 177-488 (668)
268 3sov_A LRP-6, low-density lipo 98.6 8.5E-05 2.9E-09 56.3 23.7 196 28-225 35-236 (318)
269 4a2l_A BT_4663, two-component 98.6 0.00014 4.7E-09 62.1 26.9 189 28-225 357-569 (795)
270 4a2l_A BT_4663, two-component 98.6 0.00018 6.1E-09 61.4 27.6 192 28-225 310-524 (795)
271 3v65_B Low-density lipoprotein 98.6 6.4E-05 2.2E-09 58.6 23.0 190 32-225 81-275 (386)
272 1k3i_A Galactose oxidase precu 98.6 7.7E-06 2.6E-10 68.3 18.4 113 32-144 190-325 (656)
273 2ad6_A Methanol dehydrogenase 98.6 9.7E-06 3.3E-10 66.5 18.4 179 33-213 240-523 (571)
274 2ad6_A Methanol dehydrogenase 98.6 1.2E-05 4.3E-10 65.9 19.0 177 48-227 175-494 (571)
275 2xe4_A Oligopeptidase B; hydro 98.5 3.9E-06 1.3E-10 71.2 15.6 151 71-225 175-352 (751)
276 1flg_A Protein (quinoprotein e 98.5 2.2E-05 7.7E-10 64.5 19.1 181 32-214 250-547 (582)
277 3p5b_L Low density lipoprotein 98.5 0.00021 7.1E-09 56.0 25.0 182 41-225 85-275 (400)
278 2p9w_A MAL S 1 allergenic prot 98.5 7.6E-05 2.6E-09 56.3 19.7 154 72-226 15-214 (334)
279 3m0c_C LDL receptor, low-densi 98.4 0.00068 2.3E-08 57.7 27.2 195 28-225 424-630 (791)
280 1w6s_A Methanol dehydrogenase 98.4 4.3E-05 1.5E-09 63.0 18.0 181 33-215 246-535 (599)
281 4hw6_A Hypothetical protein, I 98.4 5.2E-05 1.8E-09 60.0 17.9 153 72-226 141-303 (433)
282 3sov_A LRP-6, low-density lipo 98.4 0.00031 1.1E-08 53.2 21.3 163 29-192 80-246 (318)
283 2xbg_A YCF48-like protein; pho 98.4 0.00036 1.2E-08 53.1 24.6 189 29-225 123-320 (327)
284 3v9f_A Two-component system se 98.4 0.00048 1.7E-08 58.6 24.7 189 28-224 407-608 (781)
285 1n7d_A LDL receptor, low-densi 98.4 5.7E-06 1.9E-10 69.5 12.5 195 29-225 407-612 (699)
286 3v9f_A Two-component system se 98.4 0.00042 1.4E-08 59.0 24.1 191 28-225 363-566 (781)
287 1flg_A Protein (quinoprotein e 98.4 0.0002 6.8E-09 58.9 21.2 134 91-227 291-516 (582)
288 3pbp_A Nucleoporin NUP82; beta 98.3 0.00015 5.1E-09 56.5 18.8 149 79-231 30-214 (452)
289 3qqz_A Putative uncharacterize 98.3 0.00016 5.3E-09 52.9 17.6 160 65-225 22-202 (255)
290 3m0c_C LDL receptor, low-densi 98.3 0.0013 4.5E-08 55.9 25.0 176 48-225 403-587 (791)
291 3kya_A Putative phosphatase; s 98.3 0.00038 1.3E-08 55.8 20.4 195 30-225 141-408 (496)
292 1w6s_A Methanol dehydrogenase 98.3 0.00016 5.6E-09 59.5 18.6 186 39-227 62-342 (599)
293 3s94_A LRP-6, low-density lipo 98.2 0.0014 4.8E-08 54.3 23.5 194 28-225 40-241 (619)
294 1k3i_A Galactose oxidase precu 98.2 0.00034 1.2E-08 58.4 18.9 187 30-216 245-530 (656)
295 4a0p_A LRP6, LRP-6, low-densit 98.1 0.0025 8.7E-08 52.9 25.6 193 28-225 37-235 (628)
296 3kya_A Putative phosphatase; s 98.1 0.0005 1.7E-08 55.1 17.1 153 72-225 141-339 (496)
297 1n7d_A LDL receptor, low-densi 98.1 3.8E-05 1.3E-09 64.5 11.1 176 48-225 385-569 (699)
298 2vpj_A Kelch-like protein 12; 97.9 0.0013 4.5E-08 49.1 16.2 180 38-225 62-276 (301)
299 4a0p_A LRP6, LRP-6, low-densit 97.9 0.0076 2.6E-07 50.1 28.4 195 28-225 340-547 (628)
300 3ii7_A Kelch-like protein 7; p 97.9 0.0018 6.3E-08 48.4 16.7 180 38-225 55-270 (306)
301 2xn4_A Kelch-like protein 2; s 97.9 0.0013 4.3E-08 49.2 15.6 181 38-225 61-274 (302)
302 3s94_A LRP-6, low-density lipo 97.8 0.0088 3E-07 49.6 24.2 157 29-185 350-511 (619)
303 3sre_A PON1, serum paraoxonase 97.8 0.0058 2E-07 46.9 23.0 193 29-225 51-296 (355)
304 4asc_A Kelch repeat and BTB do 97.7 0.0073 2.5E-07 45.4 18.1 175 36-217 43-253 (315)
305 2ism_A Putative oxidoreductase 97.7 0.011 3.7E-07 45.4 20.3 100 28-130 31-153 (352)
306 3ii7_A Kelch-like protein 7; p 97.6 0.0062 2.1E-07 45.5 16.0 178 41-225 14-223 (306)
307 3amr_A 3-phytase; beta-propell 97.6 0.013 4.3E-07 44.8 20.1 143 48-192 98-272 (355)
308 2vpj_A Kelch-like protein 12; 97.6 0.0041 1.4E-07 46.4 14.7 180 38-225 14-229 (301)
309 2xbg_A YCF48-like protein; pho 97.6 0.014 4.8E-07 44.2 24.3 184 28-220 80-272 (327)
310 2xn4_A Kelch-like protein 2; s 97.6 0.0071 2.4E-07 45.1 15.5 178 40-225 17-227 (302)
311 1tl2_A L10, protein (tachylect 97.5 0.011 3.9E-07 41.9 18.4 143 70-220 41-203 (236)
312 2woz_A Kelch repeat and BTB do 97.5 0.015 5.1E-07 43.7 16.9 175 36-217 54-263 (318)
313 1zgk_A Kelch-like ECH-associat 97.5 0.0049 1.7E-07 46.2 14.1 181 38-225 70-285 (308)
314 1zgk_A Kelch-like ECH-associat 97.5 0.006 2.1E-07 45.7 14.5 180 38-225 24-238 (308)
315 1tl2_A L10, protein (tachylect 97.4 0.017 5.7E-07 41.1 15.6 143 28-178 41-204 (236)
316 2ism_A Putative oxidoreductase 97.4 0.026 8.9E-07 43.3 19.1 182 28-215 75-333 (352)
317 3s25_A Hypothetical 7-bladed b 97.3 0.023 7.8E-07 42.6 15.2 162 33-214 58-240 (302)
318 3pbp_A Nucleoporin NUP82; beta 97.2 0.046 1.6E-06 42.8 19.1 145 35-181 28-209 (452)
319 3sre_A PON1, serum paraoxonase 97.2 0.042 1.5E-06 42.1 17.4 153 70-226 50-251 (355)
320 2g8s_A Glucose/sorbosone dehyd 97.2 0.046 1.6E-06 41.9 16.4 143 69-213 17-214 (353)
321 3a9g_A Putative uncharacterize 97.2 0.047 1.6E-06 41.9 18.7 143 69-214 28-215 (354)
322 2be1_A Serine/threonine-protei 97.2 0.0014 4.7E-08 50.0 7.5 142 40-181 11-181 (339)
323 3s25_A Hypothetical 7-bladed b 97.1 0.044 1.5E-06 41.1 15.4 163 35-217 21-204 (302)
324 2zwa_A Leucine carboxyl methyl 96.9 0.12 4E-06 43.6 17.8 189 37-226 396-634 (695)
325 1cru_A Protein (soluble quinop 96.9 0.11 3.7E-06 41.4 20.3 104 69-172 26-162 (454)
326 2g8s_A Glucose/sorbosone dehyd 96.9 0.028 9.6E-07 43.1 12.9 102 28-130 18-148 (353)
327 4asc_A Kelch repeat and BTB do 96.9 0.087 3E-06 39.4 18.5 177 42-225 8-219 (315)
328 2xzh_A Clathrin heavy chain 1; 96.8 0.11 3.8E-06 39.3 20.2 159 27-186 151-334 (365)
329 2woz_A Kelch repeat and BTB do 96.7 0.11 3.9E-06 38.8 16.8 171 50-225 25-229 (318)
330 1cru_A Protein (soluble quinop 96.7 0.17 5.8E-06 40.2 19.3 105 27-131 26-163 (454)
331 2uvk_A YJHT; unknown function, 96.7 0.024 8.2E-07 43.3 10.9 125 91-217 168-326 (357)
332 3a9g_A Putative uncharacterize 96.6 0.15 5.2E-06 39.0 23.3 185 28-215 73-330 (354)
333 3das_A Putative oxidoreductase 96.5 0.2 6.7E-06 38.3 18.9 149 64-213 26-218 (347)
334 3das_A Putative oxidoreductase 96.1 0.31 1.1E-05 37.2 20.4 106 25-130 29-158 (347)
335 1bpo_A Protein (clathrin); cla 96.0 0.41 1.4E-05 37.8 22.8 159 27-186 150-333 (494)
336 2zwa_A Leucine carboxyl methyl 96.0 0.23 8E-06 41.8 14.0 149 38-188 451-639 (695)
337 2be1_A Serine/threonine-protei 96.0 0.08 2.7E-06 40.3 10.2 112 82-193 11-139 (339)
338 2uvk_A YJHT; unknown function, 95.9 0.11 3.8E-06 39.5 11.0 140 49-191 168-349 (357)
339 2xzh_A Clathrin heavy chain 1; 95.9 0.38 1.3E-05 36.5 23.0 190 28-221 107-326 (365)
340 3ott_A Two-component system se 95.7 0.83 2.9E-05 38.7 24.1 187 28-225 63-258 (758)
341 1xi4_A Clathrin heavy chain; a 95.5 1.1 3.7E-05 41.0 16.1 192 33-230 71-292 (1630)
342 1xi4_A Clathrin heavy chain; a 94.3 1.6 5.5E-05 39.9 14.2 157 28-185 151-332 (1630)
343 3sbq_A Nitrous-oxide reductase 93.5 0.29 1E-05 39.8 7.5 69 115-184 326-408 (638)
344 1bpo_A Protein (clathrin); cla 93.4 2.4 8.3E-05 33.6 24.8 190 28-221 106-325 (494)
345 3ei3_A DNA damage-binding prot 91.9 6.8 0.00023 35.2 25.7 128 93-224 494-633 (1158)
346 3sbq_A Nitrous-oxide reductase 90.1 2.2 7.5E-05 35.0 8.9 66 158-225 327-406 (638)
347 2wg3_C Hedgehog-interacting pr 89.8 6.5 0.00022 31.3 15.8 105 69-173 13-158 (463)
348 3zwu_A Alkaline phosphatase PH 89.6 2.6 9E-05 34.7 9.3 60 156-215 478-549 (592)
349 2wg3_C Hedgehog-interacting pr 89.4 7 0.00024 31.1 14.9 105 112-216 14-158 (463)
350 3ott_A Two-component system se 89.0 9.7 0.00033 32.2 25.4 185 29-223 104-303 (758)
351 4gq2_M Nucleoporin NUP120; bet 88.4 4.7 0.00016 35.4 10.6 37 155-191 237-273 (950)
352 4a9v_A PHOX; hydrolase, beta-p 88.3 5.2 0.00018 32.8 10.0 61 155-215 477-549 (592)
353 3uc1_A DNA gyrase subunit A; D 87.8 7.3 0.00025 29.4 17.3 154 28-183 95-278 (327)
354 3ei3_A DNA damage-binding prot 86.0 19 0.00066 32.4 24.1 187 27-216 553-756 (1158)
355 1suu_A DNA gyrase subunit A; t 81.5 15 0.0005 27.5 22.6 187 37-225 6-229 (312)
356 3qhy_B Beta-lactamase inhibito 81.0 14 0.00048 27.0 14.4 126 90-226 119-245 (282)
357 4gq2_M Nucleoporin NUP120; bet 79.6 32 0.0011 30.3 18.8 37 113-149 237-273 (950)
358 3b7f_A Glycosyl hydrolase, BNR 78.4 20 0.0007 27.4 21.7 141 71-214 116-296 (394)
359 3b7f_A Glycosyl hydrolase, BNR 78.2 21 0.00071 27.3 22.8 174 41-218 24-254 (394)
360 4fhn_B Nucleoporin NUP120; pro 77.7 12 0.00041 33.6 8.9 35 115-149 241-275 (1139)
361 3qhy_B Beta-lactamase inhibito 75.8 21 0.00071 26.1 13.6 164 48-225 41-205 (282)
362 3no0_A DNA gyrase subunit A; D 74.7 22 0.00076 26.0 21.2 192 29-225 25-244 (276)
363 3zwu_A Alkaline phosphatase PH 73.2 24 0.00082 29.1 8.9 58 72-129 478-548 (592)
364 4a9v_A PHOX; hydrolase, beta-p 69.3 44 0.0015 27.6 9.4 60 71-130 477-549 (592)
365 4fhn_B Nucleoporin NUP120; pro 68.3 5.3 0.00018 35.8 4.4 36 156-191 240-275 (1139)
366 1suu_A DNA gyrase subunit A; t 67.0 37 0.0013 25.3 20.9 102 80-183 113-230 (312)
367 3uc1_A DNA gyrase subunit A; D 64.6 43 0.0015 25.2 21.5 195 29-225 43-277 (327)
368 3f7f_A Nucleoporin NUP120; nuc 64.5 16 0.00054 31.0 6.1 35 156-192 224-258 (729)
369 3f7f_A Nucleoporin NUP120; nuc 61.8 17 0.00058 30.8 5.9 29 80-108 230-258 (729)
370 1q47_A Semaphorin 3A; beta pro 59.4 41 0.0014 27.1 7.6 56 167-222 423-487 (495)
371 3no0_A DNA gyrase subunit A; D 56.9 54 0.0019 23.9 18.7 154 27-183 67-245 (276)
372 3ol2_B Plexin-B1; beta-propell 55.4 44 0.0015 27.1 7.1 57 167-223 402-462 (528)
373 3al9_A Plexin-A2; beta-propell 54.5 25 0.00085 28.6 5.7 56 167-222 415-476 (539)
374 1zi0_A DNA gyrase subunit A; b 53.9 65 0.0022 23.9 24.0 185 38-225 2-224 (307)
375 1q47_A Semaphorin 3A; beta pro 52.8 58 0.002 26.2 7.4 56 124-179 422-487 (495)
376 3q6k_A 43.2 kDa salivary prote 51.9 81 0.0028 24.4 18.7 157 70-226 87-305 (381)
377 1wp5_A Topoisomerase IV; broke 48.7 83 0.0028 23.6 20.9 186 37-225 3-223 (323)
378 3nvq_A Semaphorin-7A; beta-pro 48.6 81 0.0028 26.0 7.7 57 167-223 382-445 (590)
379 3q6k_A 43.2 kDa salivary prote 46.1 1E+02 0.0035 23.8 23.5 189 27-215 86-342 (381)
380 4gz8_A Semaphorin-3A; multi-do 37.3 89 0.003 26.3 6.4 56 167-222 431-495 (667)
381 3nvq_A Semaphorin-7A; beta-pro 36.3 1.6E+02 0.0054 24.4 7.6 56 124-179 381-444 (590)
382 1olz_A Semaphorin 4D; developm 35.6 1.7E+02 0.006 24.5 8.0 56 124-179 416-477 (663)
383 3oky_A Plexin-A2; transmembran 35.2 1.2E+02 0.0041 25.6 6.9 58 166-223 413-476 (681)
384 1olz_A Semaphorin 4D; developm 34.9 1.9E+02 0.0064 24.4 8.0 56 167-222 417-477 (663)
385 4hvt_A Ritya.17583.B, post-pro 33.0 2.3E+02 0.0077 24.1 18.9 193 29-225 130-379 (711)
386 3al9_A Plexin-A2; beta-propell 32.7 64 0.0022 26.3 4.8 57 123-179 413-476 (539)
387 4gz8_A Semaphorin-3A; multi-do 30.6 1.5E+02 0.005 25.0 6.7 56 124-179 430-495 (667)
388 3l6v_A GYRA, DNA gyrase subuni 29.2 1.9E+02 0.0066 22.1 22.2 144 36-182 4-178 (370)
389 3oky_B Putative uncharacterize 27.0 2.3E+02 0.0077 23.3 7.0 28 196-223 469-496 (565)
390 1wp5_A Topoisomerase IV; broke 25.2 2.1E+02 0.0073 21.3 22.3 194 29-224 40-274 (323)
391 1zi0_A DNA gyrase subunit A; b 22.8 2.3E+02 0.0079 20.9 21.7 143 80-225 108-275 (307)
392 1sqj_A OXG-RCBH, oligoxylogluc 20.4 4.1E+02 0.014 22.7 22.4 60 27-87 14-82 (789)
No 1
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=2.5e-41 Score=257.88 Aligned_cols=217 Identities=94% Similarity=1.471 Sum_probs=203.1
Q ss_pred CCCCCccceeEEeecccccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEecC
Q psy4391 10 SSNPKPNYVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSD 89 (231)
Q Consensus 10 ~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 89 (231)
+.+.++++.+++++.+|...|.+++|+|++++|++++.||.|++|+..+++....+.+|...|.+++|+|++++|++++.
T Consensus 6 ~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~ 85 (312)
T 4ery_A 6 PTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASD 85 (312)
T ss_dssp ---CCCCCEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred CCcCCCCceeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECC
Confidence 34456778899999999999999999999999999999999999999999988899999999999999999999999999
Q ss_pred CCcEEEEeCCCceeeeeecCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeEE
Q psy4391 90 DKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIV 169 (231)
Q Consensus 90 ~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 169 (231)
|+.|++||+++++.+..+..|...+.++.|+|+++++++++.|+.|++||+++++.+..+..|..++.+++|+|++++++
T Consensus 86 d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 165 (312)
T 4ery_A 86 DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIV 165 (312)
T ss_dssp TSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred CCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCeEEEEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCC
Q psy4391 170 SSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSY 226 (231)
Q Consensus 170 ~~~~dg~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~~ 226 (231)
+++.||.|++||+++++.+..+...+..++..++|+|++++|++++.||.|++||..
T Consensus 166 ~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~ 222 (312)
T 4ery_A 166 SSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS 222 (312)
T ss_dssp EEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETT
T ss_pred EEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECC
Confidence 999999999999999988877776777789999999999999999999999999974
No 2
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=2.5e-40 Score=251.77 Aligned_cols=211 Identities=21% Similarity=0.423 Sum_probs=192.0
Q ss_pred ceeEEeecccccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEecCCCcEEEE
Q psy4391 17 YVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIW 96 (231)
Q Consensus 17 ~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~ 96 (231)
..++.++.+|.+.|.+++|+|++++|++++.||.|++||..++.....+..|...+.+++|+|++++|++++.|+.|++|
T Consensus 3 l~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vw 82 (304)
T 2ynn_A 3 LDIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVF 82 (304)
T ss_dssp CCCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEE
T ss_pred ceeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEE
Confidence 34566788999999999999999999999999999999999998888899899999999999999999999999999999
Q ss_pred eCCCceeeeeecCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCc-eeeeccCCCCCeEEEEEcC-CCCeEEEEecC
Q psy4391 97 ELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK-CLKTLPAHSDPVSAVHFNR-DGSLIVSSSYD 174 (231)
Q Consensus 97 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~-~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d 174 (231)
|+.+++.+..+.+|...|.+++|+|++.++++++.|+.|++||++++. ....+..|...|.+++|+| ++.+|++|+.|
T Consensus 83 d~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D 162 (304)
T 2ynn_A 83 NYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLD 162 (304)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETT
T ss_pred ECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCC
Confidence 999999999999999999999999999999999999999999998874 4566788999999999999 67899999999
Q ss_pred CeEEEEeCCCCceeeeeecCCCCCeEEEEECC--CCCEEEEEeCCCeEEEEeCCC
Q psy4391 175 GLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP--NGKYILAATLDNTLKLWDSYP 227 (231)
Q Consensus 175 g~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~--~g~~l~~~s~d~~v~vwd~~~ 227 (231)
+.|++||+........+...+...+..+.|+| ++++|++++.|+.|++||...
T Consensus 163 ~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~ 217 (304)
T 2ynn_A 163 RTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQT 217 (304)
T ss_dssp SEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTT
T ss_pred CeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCC
Confidence 99999999888776666666667788888876 778999999999999999743
No 3
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=4.9e-39 Score=246.37 Aligned_cols=204 Identities=30% Similarity=0.491 Sum_probs=190.7
Q ss_pred EeecccccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEecCCCcEEEEeCCC
Q psy4391 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSS 100 (231)
Q Consensus 21 ~~~~~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~~ 100 (231)
..+..|...+.+++|+|++++|++++.+|.+++|+..+++....+..+...+.+++|+|++++|++++.|+.|++||+.+
T Consensus 116 ~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~ 195 (321)
T 3ow8_A 116 KSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIAT 195 (321)
T ss_dssp EEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred EEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 34556778899999999999999999999999999999988888888888899999999999999999999999999999
Q ss_pred ceeeeeecCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeEEEEecCCeEEEE
Q psy4391 101 GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 180 (231)
Q Consensus 101 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~ 180 (231)
++.+..+.+|...+.+++|+|++++|++++.|+.|++||+++++....+..|...|.+++|+|++++|++++.|+.|++|
T Consensus 196 ~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iw 275 (321)
T 3ow8_A 196 GKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVW 275 (321)
T ss_dssp TEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred CcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEE
Confidence 99999999999999999999999999999999999999999999989999999999999999999999999999999999
Q ss_pred eCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeC
Q psy4391 181 DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225 (231)
Q Consensus 181 d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~ 225 (231)
|+.+++.+..+.. +...|..++|+|+|++|++++.||.|++||.
T Consensus 276 d~~~~~~~~~~~~-h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 276 DVGTRTCVHTFFD-HQDQVWGVKYNGNGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp ETTTTEEEEEECC-CSSCEEEEEECTTSSEEEEEETTCCEEEEEC
T ss_pred eCCCCEEEEEEcC-CCCcEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 9999988877654 4567999999999999999999999999994
No 4
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=7e-39 Score=247.57 Aligned_cols=206 Identities=21% Similarity=0.284 Sum_probs=180.1
Q ss_pred eeEEeecccccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCC-EEEEecCCCcEEEE
Q psy4391 18 VLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR-LLVSGSDDKTLKIW 96 (231)
Q Consensus 18 ~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~~g~i~~~ 96 (231)
..++.+.+|...|++++|+|+|++|++|+.||.|++||+.+++....+.+|...|.+++|+|++. .+++++.|+.|++|
T Consensus 118 ~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iw 197 (344)
T 4gqb_B 118 VSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLW 197 (344)
T ss_dssp EEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEE
T ss_pred EeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccc
Confidence 34556678999999999999999999999999999999999999999999999999999999885 67899999999999
Q ss_pred eCCCceeeeeec--CCCcceEEEEECCC-CCEEEEeecCCcEEEEECCCCceeeeccCCCCCeEEEEEcCCC-CeEEEEe
Q psy4391 97 ELSSGKCLKTLK--GHSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDG-SLIVSSS 172 (231)
Q Consensus 97 d~~~~~~~~~~~--~~~~~v~~~~~~~~-~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~ 172 (231)
|+++++....+. .+...+.+++|+|+ ++++++|+.|+.|++||+++++.+..+..|...|.+++|+|++ ++|++|+
T Consensus 198 d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs 277 (344)
T 4gqb_B 198 DTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLS 277 (344)
T ss_dssp ETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEE
T ss_pred cccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEe
Confidence 999988777664 34456889999985 5788999999999999999999999999999999999999998 5789999
Q ss_pred cCCeEEEEeCCCCceeeeeecCCCCCeEEEEECCCCC-EEEEEeCCCeEEEEeC
Q psy4391 173 YDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK-YILAATLDNTLKLWDS 225 (231)
Q Consensus 173 ~dg~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~-~l~~~s~d~~v~vwd~ 225 (231)
.|+.|++||+.+++... + ..+...|.+++|+|+++ +|++++.|++|++|+.
T Consensus 278 ~D~~i~vwd~~~~~~~~-~-~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v 329 (344)
T 4gqb_B 278 EDCSLAVLDSSLSELFR-S-QAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVV 329 (344)
T ss_dssp TTSCEEEECTTCCEEEE-E-CCCSSCEEEEEECSSSTTEEEEEETTSCEEEEEC
T ss_pred CCCeEEEEECCCCcEEE-E-cCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEEC
Confidence 99999999999887654 2 35667899999999987 5678999999999995
No 5
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=6.1e-39 Score=245.85 Aligned_cols=207 Identities=30% Similarity=0.510 Sum_probs=192.6
Q ss_pred eEEeecccccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEecCCCcEEEEeC
Q psy4391 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWEL 98 (231)
Q Consensus 19 ~~~~~~~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~ 98 (231)
...++.+|...|.+++|++++..+++++.|+.|++||..+++....+..+...+..++|+|+++++++++.++.+++|++
T Consensus 72 ~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~ 151 (321)
T 3ow8_A 72 LQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGV 151 (321)
T ss_dssp EEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEET
T ss_pred eeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEc
Confidence 44567899999999999999999999999999999999999988888888888999999999999999999999999999
Q ss_pred CCceeeeeecCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeEEEEecCCeEE
Q psy4391 99 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCR 178 (231)
Q Consensus 99 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 178 (231)
++++....+..+...+.+++|+|++++|++++.|+.|++||+++++.+..+..|..+|.+++|+|++++|++++.|+.|+
T Consensus 152 ~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~ 231 (321)
T 3ow8_A 152 ESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIK 231 (321)
T ss_dssp TTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEE
T ss_pred CCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEE
Confidence 99988888888888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCC
Q psy4391 179 IWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSY 226 (231)
Q Consensus 179 v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~~ 226 (231)
+||+++++....+. .+...|..++|+|+|++|++++.|+.|++||..
T Consensus 232 iwd~~~~~~~~~~~-~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~ 278 (321)
T 3ow8_A 232 IYDVQHANLAGTLS-GHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVG 278 (321)
T ss_dssp EEETTTCCEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred EEECCCcceeEEEc-CCCCceEEEEECCCCCEEEEEeCCCcEEEEeCC
Confidence 99999888776654 455679999999999999999999999999964
No 6
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=5.7e-39 Score=253.75 Aligned_cols=209 Identities=34% Similarity=0.674 Sum_probs=194.3
Q ss_pred eeEEeecccccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEecCCCcEEEEe
Q psy4391 18 VLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWE 97 (231)
Q Consensus 18 ~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d 97 (231)
...+.+.+|...|++++|+|++++|++|+.||.|++||..++.....+.+|...|.+++|+|+++++++++.|+.|++||
T Consensus 99 ~~~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd 178 (410)
T 1vyh_C 99 PEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWD 178 (410)
T ss_dssp SCSCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEE
T ss_pred CceEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEe
Confidence 34566789999999999999999999999999999999999988889999999999999999999999999999999999
Q ss_pred CCCceeeeeecCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeEEEEecCCeE
Q psy4391 98 LSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 177 (231)
Q Consensus 98 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 177 (231)
+.+++.+..+.+|...|.+++|+|++.++++++.|+.|++||++++.++..+..|...+.++.++|++.++++++.|+.|
T Consensus 179 ~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v 258 (410)
T 1vyh_C 179 FQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTV 258 (410)
T ss_dssp TTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred CCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCceeeeeecCCCCCeEEEEECCC--------------------CCEEEEEeCCCeEEEEeCCC
Q psy4391 178 RIWDTASGQCLKTLIDDDNPPVSFVKFSPN--------------------GKYILAATLDNTLKLWDSYP 227 (231)
Q Consensus 178 ~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~--------------------g~~l~~~s~d~~v~vwd~~~ 227 (231)
++||+.+++....+. .+...+.+++|+|+ |.+|++|+.|+.|++||...
T Consensus 259 ~vwd~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~ 327 (410)
T 1vyh_C 259 RVWVVATKECKAELR-EHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVST 327 (410)
T ss_dssp EEEETTTCCEEEEEC-CCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTT
T ss_pred EEEECCCCceeeEec-CCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCC
Confidence 999999988776654 45567999999996 67899999999999999643
No 7
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2.2e-38 Score=250.45 Aligned_cols=206 Identities=37% Similarity=0.636 Sum_probs=192.6
Q ss_pred EeecccccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEecCCCcEEEEeCCC
Q psy4391 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSS 100 (231)
Q Consensus 21 ~~~~~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~~ 100 (231)
.++.+|...|.+++|+|++++|++|+.||.|++||..++.....+.+|...|.+++|+|+++++++++.|+.|++||+.+
T Consensus 144 ~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~ 223 (410)
T 1vyh_C 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQT 223 (410)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTT
T ss_pred EEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCC
Confidence 46778999999999999999999999999999999998888888899999999999999999999999999999999999
Q ss_pred ceeeeeecCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeeccCCCCCeEEEEEcCC----------------
Q psy4391 101 GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRD---------------- 164 (231)
Q Consensus 101 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~---------------- 164 (231)
+..+..+.+|...+.++.++|++.++++++.|+.|++||+++++....+..|...|.+++|+|+
T Consensus 224 ~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 303 (410)
T 1vyh_C 224 GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKK 303 (410)
T ss_dssp CCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC---
T ss_pred CcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccc
Confidence 9999999999999999999999999999999999999999999998899999999999999996
Q ss_pred ----CCeEEEEecCCeEEEEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCC
Q psy4391 165 ----GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSYP 227 (231)
Q Consensus 165 ----~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~~~ 227 (231)
+.++++|+.|+.|++||+.+++.+..+.. +...|..++|+|+|++|++++.||.|++||..+
T Consensus 304 ~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~-h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~ 369 (410)
T 1vyh_C 304 SGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVG-HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369 (410)
T ss_dssp ----CCEEEEEETTSEEEEEETTTTEEEEEEEC-CSSCEEEEEECSSSSCEEEEETTTEEEEECCTT
T ss_pred cCCCCCEEEEEeCCCeEEEEECCCCceEEEEEC-CCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 66899999999999999999988777654 456799999999999999999999999999754
No 8
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=9.3e-38 Score=241.07 Aligned_cols=209 Identities=25% Similarity=0.488 Sum_probs=190.1
Q ss_pred cceeEEeecccccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEecCCCcEEE
Q psy4391 16 NYVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKI 95 (231)
Q Consensus 16 ~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~ 95 (231)
......++.+|...|.+++|+|++++|++|+.||.|++||..++.....+..|...+..++|+|+++++++++.|+.+++
T Consensus 44 ~~~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~i 123 (340)
T 1got_B 44 QMRTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSI 123 (340)
T ss_dssp CCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEE
T ss_pred cchhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEE
Confidence 34556778899999999999999999999999999999999999888888888889999999999999999999999999
Q ss_pred EeCCCc----eeeeeecCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeEEEE
Q psy4391 96 WELSSG----KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSS 171 (231)
Q Consensus 96 ~d~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 171 (231)
|++.+. .....+.+|...+.++.|++++. +++++.|+.|++||+++++.+..+..|.+.|.+++|+|+++++++|
T Consensus 124 w~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg 202 (340)
T 1got_B 124 YNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSG 202 (340)
T ss_dssp EETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred EECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEE
Confidence 999865 34556778889999999988765 8899999999999999999999999999999999999999999999
Q ss_pred ecCCeEEEEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCC
Q psy4391 172 SYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSY 226 (231)
Q Consensus 172 ~~dg~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~~ 226 (231)
+.|+.|++||+++++....+. .+...|..++|+|+|++|++++.||.|++||..
T Consensus 203 ~~d~~v~~wd~~~~~~~~~~~-~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~ 256 (340)
T 1got_B 203 ACDASAKLWDVREGMCRQTFT-GHESDINAICFFPNGNAFATGSDDATCRLFDLR 256 (340)
T ss_dssp ETTSCEEEEETTTCSEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred eCCCcEEEEECCCCeeEEEEc-CCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECC
Confidence 999999999999988776654 455679999999999999999999999999964
No 9
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.2e-38 Score=244.12 Aligned_cols=210 Identities=28% Similarity=0.533 Sum_probs=182.5
Q ss_pred cceeEEeeccccc-ceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEE--E-EecccccEEEEEECCCCCEEEEecCCC
Q psy4391 16 NYVLKFTLAGHTK-AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK--T-ISGHKLGISDVAWSSDSRLLVSGSDDK 91 (231)
Q Consensus 16 ~~~~~~~~~~h~~-~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~--~-~~~~~~~v~~~~~~~~~~~l~~~~~~g 91 (231)
...+..++.+|.. .|.+++|+|+|++|++|+.|+.|++|+..++.... . ..+|...|.+++|+|++++|++++.|+
T Consensus 4 ~~~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~ 83 (345)
T 3fm0_A 4 SLVLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDA 83 (345)
T ss_dssp CEEEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTS
T ss_pred cEEEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCC
Confidence 3445667889987 89999999999999999999999999998765432 2 257888999999999999999999999
Q ss_pred cEEEEeCCCc--eeeeeecCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCc---eeeeccCCCCCeEEEEEcCCCC
Q psy4391 92 TLKIWELSSG--KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK---CLKTLPAHSDPVSAVHFNRDGS 166 (231)
Q Consensus 92 ~i~~~d~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~---~~~~~~~~~~~v~~~~~~~~~~ 166 (231)
.+++|+...+ +.+..+.+|...|.+++|+|++++|++++.|+.|++||++.+. .+..+..|...|.+++|+|+++
T Consensus 84 ~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 163 (345)
T 3fm0_A 84 TTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQE 163 (345)
T ss_dssp CEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSS
T ss_pred cEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCC
Confidence 9999998765 4567788999999999999999999999999999999998764 3556778899999999999999
Q ss_pred eEEEEecCCeEEEEeCCCCceee-eeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeC
Q psy4391 167 LIVSSSYDGLCRIWDTASGQCLK-TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225 (231)
Q Consensus 167 ~l~~~~~dg~i~v~d~~~~~~~~-~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~ 225 (231)
+|++++.|+.|++||..+++... .....+...|..++|+|+|++|++++.|+.|++||.
T Consensus 164 ~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~ 223 (345)
T 3fm0_A 164 LLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQ 223 (345)
T ss_dssp CEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred EEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEecc
Confidence 99999999999999998775332 223456678999999999999999999999999995
No 10
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.6e-37 Score=237.76 Aligned_cols=211 Identities=29% Similarity=0.516 Sum_probs=187.8
Q ss_pred ccceeEEeecccccceEEEEECCCC-CEEEEEeCCCcEEEeecCC-----CcEEEEEecccccEEEEEECCCCCEEEEec
Q psy4391 15 PNYVLKFTLAGHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYD-----GKFEKTISGHKLGISDVAWSSDSRLLVSGS 88 (231)
Q Consensus 15 ~~~~~~~~~~~h~~~i~~~~~~~~~-~~l~~~~~dg~i~i~~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 88 (231)
....+..++.+|.+.|.+++|+|++ ++|++|+.|+.|++|+... +.....+.+|...|.+++|+|+++++++++
T Consensus 5 ~~~~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s 84 (319)
T 3frx_A 5 EVLVLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSAS 84 (319)
T ss_dssp EEEEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred eEEEEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEe
Confidence 3466777899999999999999965 7999999999999999753 223556788999999999999999999999
Q ss_pred CCCcEEEEeCCCceeeeeecCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeeccCCCCCeEEEEEcCC----
Q psy4391 89 DDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRD---- 164 (231)
Q Consensus 89 ~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~---- 164 (231)
.|+.|++||+.+++....+.+|...|.+++|+|++.++++++.|+.|++||++ ++.+..+..|...+.++++.|.
T Consensus 85 ~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~ 163 (319)
T 3frx_A 85 WDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKAD 163 (319)
T ss_dssp TTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC----
T ss_pred CCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCCCC
Confidence 99999999999999999999999999999999999999999999999999997 4567778889999999999985
Q ss_pred --CCeEEEEecCCeEEEEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCC
Q psy4391 165 --GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSYP 227 (231)
Q Consensus 165 --~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~~~ 227 (231)
+..+++++.|+.|++||+.+.+....+. .+...|..++|+|+|++|++++.||.|++||...
T Consensus 164 ~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~-~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~ 227 (319)
T 3frx_A 164 DDSVTIISAGNDKMVKAWNLNQFQIEADFI-GHNSNINTLTASPDGTLIASAGKDGEIMLWNLAA 227 (319)
T ss_dssp --CCEEEEEETTSCEEEEETTTTEEEEEEC-CCCSCEEEEEECTTSSEEEEEETTCEEEEEETTT
T ss_pred CCccEEEEEeCCCEEEEEECCcchhheeec-CCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 4489999999999999999887666554 4567899999999999999999999999999744
No 11
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.8e-37 Score=239.46 Aligned_cols=205 Identities=27% Similarity=0.519 Sum_probs=185.7
Q ss_pred eeEEeecccccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEecCCCcEEEEe
Q psy4391 18 VLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWE 97 (231)
Q Consensus 18 ~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d 97 (231)
.....+.+|...|.++.|++++. +++++.|+.|++||..++.....+.+|...|.+++|+|+++++++++.|+.|++||
T Consensus 134 ~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd 212 (340)
T 1got_B 134 RVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWD 212 (340)
T ss_dssp EEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred eeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEE
Confidence 34456778999999999998776 78889999999999999998889999999999999999999999999999999999
Q ss_pred CCCceeeeeecCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeeccC--CCCCeEEEEEcCCCCeEEEEecCC
Q psy4391 98 LSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPA--HSDPVSAVHFNRDGSLIVSSSYDG 175 (231)
Q Consensus 98 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~dg 175 (231)
+.++.....+..|...+.+++|+|+++++++++.|+.|++||+++++.+..+.. +...+.+++|+|+++++++|+.||
T Consensus 213 ~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~ 292 (340)
T 1got_B 213 VREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDF 292 (340)
T ss_dssp TTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTS
T ss_pred CCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCC
Confidence 999998899999999999999999999999999999999999998887666542 234799999999999999999999
Q ss_pred eEEEEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEe
Q psy4391 176 LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224 (231)
Q Consensus 176 ~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd 224 (231)
.|++||+.+++.+..+. .+..+|.+++|+|+|++|++|+.|+.|+|||
T Consensus 293 ~i~vwd~~~~~~~~~~~-~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 293 NCNVWDALKADRAGVLA-GHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EEEEEETTTCCEEEEEE-CCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred eEEEEEcccCcEeeEee-cCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 99999999888777665 4566899999999999999999999999997
No 12
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=4.4e-37 Score=235.36 Aligned_cols=205 Identities=27% Similarity=0.542 Sum_probs=181.7
Q ss_pred EeecccccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEecCCCcEEEEeCCC
Q psy4391 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSS 100 (231)
Q Consensus 21 ~~~~~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~~ 100 (231)
.++.+|...|.+++|+|++++|++|+.|+.|++||..+++....+.+|...|.+++|+|+++++++++.|+.|++||++.
T Consensus 59 ~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~ 138 (319)
T 3frx_A 59 RSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKG 138 (319)
T ss_dssp EEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTS
T ss_pred eEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 45779999999999999999999999999999999999999999999999999999999999999999999999999974
Q ss_pred ceeeeeecCCCcceEEEEECCC------CCEEEEeecCCcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeEEEEecC
Q psy4391 101 GKCLKTLKGHSNYVFCCNFNPQ------SNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 174 (231)
Q Consensus 101 ~~~~~~~~~~~~~v~~~~~~~~------~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 174 (231)
+.+..+.+|...+.++.+.|. +..+++++.|+.|++||+++++....+..|...|.+++|+|++++|++++.|
T Consensus 139 -~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~d 217 (319)
T 3frx_A 139 -QCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKD 217 (319)
T ss_dssp -CEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETT
T ss_pred -CeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCC
Confidence 556777889999999999985 4589999999999999999998888889999999999999999999999999
Q ss_pred CeEEEEeCCCCceeeeeecC-----------------------------------------------CCCCeEEEEECCC
Q psy4391 175 GLCRIWDTASGQCLKTLIDD-----------------------------------------------DNPPVSFVKFSPN 207 (231)
Q Consensus 175 g~i~v~d~~~~~~~~~~~~~-----------------------------------------------~~~~i~~~~~s~~ 207 (231)
|.|++||+.+++.+..+... ....+.+++|+|+
T Consensus 218 g~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spd 297 (319)
T 3frx_A 218 GEIMLWNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSAD 297 (319)
T ss_dssp CEEEEEETTTTEEEEEEECCSCEEEEEECSSSSEEEEEETTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTT
T ss_pred CeEEEEECCCCcEEEEecCCCcEEEEEEcCCCCEEEEEcCCCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCC
Confidence 99999999887654432110 1234667889999
Q ss_pred CCEEEEEeCCCeEEEEeCC
Q psy4391 208 GKYILAATLDNTLKLWDSY 226 (231)
Q Consensus 208 g~~l~~~s~d~~v~vwd~~ 226 (231)
|++|++|+.||.|+|||..
T Consensus 298 g~~l~sg~~Dg~i~vWd~~ 316 (319)
T 3frx_A 298 GQTLFAGYTDNVIRVWQVM 316 (319)
T ss_dssp SSEEEEEETTSCEEEEEEE
T ss_pred CCEEEEeecCceEEEEEEe
Confidence 9999999999999999863
No 13
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=5.1e-37 Score=238.18 Aligned_cols=210 Identities=26% Similarity=0.527 Sum_probs=184.1
Q ss_pred eeEEeecccccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEE---------------------------------
Q psy4391 18 VLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT--------------------------------- 64 (231)
Q Consensus 18 ~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~--------------------------------- 64 (231)
....++.+|...|.+++|+|++++|++|+.||.|++||..+++....
T Consensus 55 ~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~ 134 (354)
T 2pbi_B 55 KTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYP 134 (354)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEE
T ss_pred EEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEE
Confidence 34567889999999999999999999999999999999766544332
Q ss_pred ---------------EecccccEEEEEECCCCCEEEEecCCCcEEEEeCCCceeeeeecCCCcceEEEEECC--CCCEEE
Q psy4391 65 ---------------ISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNP--QSNLIV 127 (231)
Q Consensus 65 ---------------~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~ 127 (231)
+..|...+..++|+|++..|++++.|+.|++||+++++.+..+.+|...+.+++++| ++++++
T Consensus 135 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~ 214 (354)
T 2pbi_B 135 LTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFV 214 (354)
T ss_dssp CCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEE
T ss_pred EeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEE
Confidence 223555688899999999999999999999999999999999999999999999987 578999
Q ss_pred EeecCCcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeEEEEecCCeEEEEeCCCCceeeeeecC-CCCCeEEEEECC
Q psy4391 128 SGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD-DNPPVSFVKFSP 206 (231)
Q Consensus 128 ~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~-~~~~i~~~~~s~ 206 (231)
+|+.|+.|++||+++++.+..+..|...|.+++|+|++.+|++++.|+.|++||++..+.+..+... ....+..++|+|
T Consensus 215 sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~ 294 (354)
T 2pbi_B 215 SGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSL 294 (354)
T ss_dssp EEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECT
T ss_pred EEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeC
Confidence 9999999999999999999999999999999999999999999999999999999988766554332 234678899999
Q ss_pred CCCEEEEEeCCCeEEEEeCCC
Q psy4391 207 NGKYILAATLDNTLKLWDSYP 227 (231)
Q Consensus 207 ~g~~l~~~s~d~~v~vwd~~~ 227 (231)
+|++|++++.|+.|++||...
T Consensus 295 ~g~~l~~g~~d~~i~vwd~~~ 315 (354)
T 2pbi_B 295 SGRLLFAGYNDYTINVWDVLK 315 (354)
T ss_dssp TSSEEEEEETTSCEEEEETTT
T ss_pred CCCEEEEEECCCcEEEEECCC
Confidence 999999999999999999743
No 14
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=2.9e-37 Score=234.84 Aligned_cols=207 Identities=28% Similarity=0.490 Sum_probs=184.5
Q ss_pred EEeecccccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEecCCCcEEEEeCC
Q psy4391 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELS 99 (231)
Q Consensus 20 ~~~~~~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~ 99 (231)
...+..|...|.+++|+|++++|++|+.|+.|++||..+++....+.+|...|.+++|+|+++++++++.|+.|++||++
T Consensus 48 ~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~ 127 (304)
T 2ynn_A 48 VRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWE 127 (304)
T ss_dssp EEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGG
T ss_pred eEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECC
Confidence 35567899999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred Cc-eeeeeecCCCcceEEEEECC-CCCEEEEeecCCcEEEEECCCCceeeecc-CCCCCeEEEEEcC--CCCeEEEEecC
Q psy4391 100 SG-KCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVRTGKCLKTLP-AHSDPVSAVHFNR--DGSLIVSSSYD 174 (231)
Q Consensus 100 ~~-~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~~v~~~~~~~--~~~~l~~~~~d 174 (231)
++ .....+.+|...+.+++|+| ++..+++|+.|+.|++||++.+.....+. .+...+..+.|+| ++.+|++++.|
T Consensus 128 ~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D 207 (304)
T 2ynn_A 128 NNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDD 207 (304)
T ss_dssp GTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETT
T ss_pred CCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCC
Confidence 76 45567788999999999999 67899999999999999998776554443 4557889999986 77899999999
Q ss_pred CeEEEEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCC
Q psy4391 175 GLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSYP 227 (231)
Q Consensus 175 g~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~~~ 227 (231)
+.|++||+++++.+..+.. +...+..++|+|++++|++++.||.|++||...
T Consensus 208 ~~i~iWd~~~~~~~~~~~~-h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~ 259 (304)
T 2ynn_A 208 LTIKIWDYQTKSCVATLEG-HMSNVSFAVFHPTLPIIISGSEDGTLKIWNSST 259 (304)
T ss_dssp SEEEEEETTTTEEEEEEEC-CSSCEEEEEECSSSSEEEEEETTSCEEEEETTT
T ss_pred CeEEEEeCCCCccceeeCC-CCCCEEEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 9999999999988877654 456799999999999999999999999999743
No 15
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=5.2e-37 Score=238.14 Aligned_cols=203 Identities=24% Similarity=0.471 Sum_probs=184.6
Q ss_pred EeecccccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECC--CCCEEEEecCCCcEEEEeC
Q psy4391 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS--DSRLLVSGSDDKTLKIWEL 98 (231)
Q Consensus 21 ~~~~~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~~g~i~~~d~ 98 (231)
..+.+|...|.++.|+|+++.|++++.|+.|++||+.+++....+.+|...+.+++|+| +++++++++.||.|++||+
T Consensus 148 ~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~ 227 (354)
T 2pbi_B 148 KSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDM 227 (354)
T ss_dssp EEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEET
T ss_pred eeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEEC
Confidence 44568999999999999999999999999999999999999999999999999999987 5689999999999999999
Q ss_pred CCceeeeeecCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeeccCC--CCCeEEEEEcCCCCeEEEEecCCe
Q psy4391 99 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAH--SDPVSAVHFNRDGSLIVSSSYDGL 176 (231)
Q Consensus 99 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~dg~ 176 (231)
++++.+..+..|...+.+++|+|++.++++++.|+.|++||++.++.+..+..+ ...+.+++|+|++.++++++.|+.
T Consensus 228 ~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~ 307 (354)
T 2pbi_B 228 RSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYT 307 (354)
T ss_dssp TTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSC
T ss_pred CCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCc
Confidence 999999999999999999999999999999999999999999988776655433 347899999999999999999999
Q ss_pred EEEEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEe
Q psy4391 177 CRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224 (231)
Q Consensus 177 i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd 224 (231)
|++||+.+++.+..+. .+...|..++|+|+|++|++++.||.|++|+
T Consensus 308 i~vwd~~~~~~~~~l~-~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 308 INVWDVLKGSRVSILF-GHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EEEEETTTCSEEEEEC-CCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred EEEEECCCCceEEEEE-CCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 9999999888776654 4567899999999999999999999999996
No 16
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.5e-37 Score=241.47 Aligned_cols=204 Identities=16% Similarity=0.273 Sum_probs=182.5
Q ss_pred EEeecccccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCC-EEEEecCCCcEEEEeC
Q psy4391 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR-LLVSGSDDKTLKIWEL 98 (231)
Q Consensus 20 ~~~~~~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~~g~i~~~d~ 98 (231)
.+...+|...|.+++|+|++++|++|+.||.|++||..+++....+.+|...|.+++|+|++. .+++++.|+.|++||+
T Consensus 132 ~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~ 211 (357)
T 4g56_B 132 KFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDT 211 (357)
T ss_dssp CEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCT
T ss_pred eeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEEC
Confidence 344568999999999999999999999999999999999999999999999999999999875 7889999999999999
Q ss_pred CCceeeeeec--CCCcceEEEEECCC-CCEEEEeecCCcEEEEECCCCceeeeccCCCCCeEEEEEcCCC-CeEEEEecC
Q psy4391 99 SSGKCLKTLK--GHSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDG-SLIVSSSYD 174 (231)
Q Consensus 99 ~~~~~~~~~~--~~~~~v~~~~~~~~-~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d 174 (231)
++++....+. .+...+.+++|+|+ +.++++|+.|+.|++||+++++.+..+..|...|.+++|+|++ ++|++++.|
T Consensus 212 ~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D 291 (357)
T 4g56_B 212 RKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISED 291 (357)
T ss_dssp TSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETT
T ss_pred CCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCC
Confidence 9887665543 45567899999997 4688999999999999999999999999999999999999987 578999999
Q ss_pred CeEEEEeCCCCceeeeeecCCCCCeEEEEECC-CCCEEEEEeCCCeEEEEeC
Q psy4391 175 GLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP-NGKYILAATLDNTLKLWDS 225 (231)
Q Consensus 175 g~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~-~g~~l~~~s~d~~v~vwd~ 225 (231)
+.|++||+.+++.+..+ .+...|..++|+| ++++|++++.||.|++||.
T Consensus 292 ~~i~iwd~~~~~~~~~~--~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~ 341 (357)
T 4g56_B 292 CTVAVLDADFSEVFRDL--SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHL 341 (357)
T ss_dssp SCEEEECTTSCEEEEEC--CCSSCEEEEEECSSSTTEEEEEETTSCEEEEEC
T ss_pred CEEEEEECCCCcEeEEC--CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEEC
Confidence 99999999998876654 4567899999998 7999999999999999996
No 17
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.5e-36 Score=234.55 Aligned_cols=210 Identities=30% Similarity=0.513 Sum_probs=181.4
Q ss_pred CccceeEEeecccccceEEEEE-----CC-CCCEEEEEeCCCcEEEeecCCC-------cEEEEEecccccEEEEEECCC
Q psy4391 14 KPNYVLKFTLAGHTKAVSSVKF-----SP-NGEWLASSSADKLIKIWGAYDG-------KFEKTISGHKLGISDVAWSSD 80 (231)
Q Consensus 14 ~~~~~~~~~~~~h~~~i~~~~~-----~~-~~~~l~~~~~dg~i~i~~~~~~-------~~~~~~~~~~~~v~~~~~~~~ 80 (231)
.++..+..++.+|.+.|++++| ++ ++++|++|+.|+.|++|+..+. .....+.+|...|.+++|+|+
T Consensus 8 ~~~~~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~ 87 (343)
T 2xzm_R 8 DIQVVKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQE 87 (343)
T ss_dssp EEEEEEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSS
T ss_pred ceEeeeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCC
Confidence 3455566788999999999999 76 8999999999999999998643 345567889999999999999
Q ss_pred CCEEEEecCCCcEEEEeCCCceeeeeecCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeee--ccCCCCCeEE
Q psy4391 81 SRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKT--LPAHSDPVSA 158 (231)
Q Consensus 81 ~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~--~~~~~~~v~~ 158 (231)
+.++++++.|+.|++||+++++....+.+|...|.+++|+|++++|++++.|+.|++||+........ ...|...+.+
T Consensus 88 ~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~ 167 (343)
T 2xzm_R 88 NCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSC 167 (343)
T ss_dssp TTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEE
T ss_pred CCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeee
Confidence 99999999999999999999999999999999999999999999999999999999999984432222 2367889999
Q ss_pred EEEcCCC----------CeEEEEecCCeEEEEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeC
Q psy4391 159 VHFNRDG----------SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225 (231)
Q Consensus 159 ~~~~~~~----------~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~ 225 (231)
++|+|++ .++++++.||.|++||. ..+....+ ..+...|..++|+|+|++|++++.||.|++||.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~-~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~ 242 (343)
T 2xzm_R 168 VRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTF-KAHESNVNHLSISPNGKYIATGGKDKKLLIWDI 242 (343)
T ss_dssp EEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEE-ECCSSCEEEEEECTTSSEEEEEETTCEEEEEES
T ss_pred eeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEE-cCccccceEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 9999987 78999999999999994 34444443 345678999999999999999999999999997
No 18
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=5.9e-37 Score=236.80 Aligned_cols=199 Identities=21% Similarity=0.326 Sum_probs=171.5
Q ss_pred cccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEE----EEecccccEEEEEECCCCCEEEEecCCCcEEEEeCCCc
Q psy4391 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK----TISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSG 101 (231)
Q Consensus 26 h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~----~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~~~ 101 (231)
|...|.+++|+|++ .|++|+.||.|++||+.+++... ...+|...|.+++|+|++++|++++.|+.|++||+.++
T Consensus 81 ~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~ 159 (344)
T 4gqb_B 81 TEAGVADLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQ 159 (344)
T ss_dssp ESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred cCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCC
Confidence 45679999999985 57788999999999998776433 34578889999999999999999999999999999999
Q ss_pred eeeeeecCCCcceEEEEECCCC-CEEEEeecCCcEEEEECCCCceeeecc--CCCCCeEEEEEcCC-CCeEEEEecCCeE
Q psy4391 102 KCLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVRTGKCLKTLP--AHSDPVSAVHFNRD-GSLIVSSSYDGLC 177 (231)
Q Consensus 102 ~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~v~d~~~~~~~~~~~--~~~~~v~~~~~~~~-~~~l~~~~~dg~i 177 (231)
+.+..+.+|...|.+++|+|++ .++++++.|+.|++||+++++....+. .+...+.+++|+|+ ++++++|+.||.|
T Consensus 160 ~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v 239 (344)
T 4gqb_B 160 VVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTV 239 (344)
T ss_dssp EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEE
T ss_pred cEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcE
Confidence 9999999999999999999988 478999999999999999998877664 34557899999985 5678899999999
Q ss_pred EEEeCCCCceeeeeecCCCCCeEEEEECCCC-CEEEEEeCCCeEEEEeCC
Q psy4391 178 RIWDTASGQCLKTLIDDDNPPVSFVKFSPNG-KYILAATLDNTLKLWDSY 226 (231)
Q Consensus 178 ~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g-~~l~~~s~d~~v~vwd~~ 226 (231)
++||+++++.+..+.. +...|..++|+|+| ++|++++.|+.|+|||..
T Consensus 240 ~~wd~~~~~~~~~~~~-h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~ 288 (344)
T 4gqb_B 240 SLVDTKSTSCVLSSAV-HSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSS 288 (344)
T ss_dssp EEEESCC--CCEEEEC-CSSCEEEEEECSSSSCCEEEEETTSCEEEECTT
T ss_pred EEEECCCCcEEEEEcC-CCCCEEEEEEccCCCeEEEEEeCCCeEEEEECC
Confidence 9999999988877654 45679999999998 579999999999999964
No 19
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=5.2e-37 Score=240.27 Aligned_cols=211 Identities=28% Similarity=0.548 Sum_probs=173.0
Q ss_pred cceeEEeecccccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEecCCCcEEE
Q psy4391 16 NYVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKI 95 (231)
Q Consensus 16 ~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~ 95 (231)
+.....++.+|.+.|++++|+|++++|++|+.||.|++||..++.....+..|...|.+++|+|+++++++++.|+.+++
T Consensus 55 ~~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~i 134 (380)
T 3iz6_a 55 DLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSI 134 (380)
T ss_dssp CCEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEE
T ss_pred eeEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEE
Confidence 34456778999999999999999999999999999999999988888888777777777777777666555555555555
Q ss_pred E--------------------------------------------------eCCCceeeeee-----cCCCcceEEEEEC
Q psy4391 96 W--------------------------------------------------ELSSGKCLKTL-----KGHSNYVFCCNFN 120 (231)
Q Consensus 96 ~--------------------------------------------------d~~~~~~~~~~-----~~~~~~v~~~~~~ 120 (231)
| |+.+++.+..+ .+|...+.++.++
T Consensus 135 w~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 214 (380)
T 3iz6_a 135 FNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSIN 214 (380)
T ss_dssp EECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEEC
T ss_pred EECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEee
Confidence 5 44444444333 3466778888897
Q ss_pred C-CCCEEEEeecCCcEEEEECC-CCceeeeccCCCCCeEEEEEcCCCCeEEEEecCCeEEEEeCCCCceeeeeecCC---
Q psy4391 121 P-QSNLIVSGSFDESVRIWDVR-TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD--- 195 (231)
Q Consensus 121 ~-~~~~l~~~~~d~~i~v~d~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~--- 195 (231)
+ +++++++|+.|+.|++||++ .+..+..+..|.+.|.+++|+|++++|++++.||.|++||+++++.+..+....
T Consensus 215 ~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~ 294 (380)
T 3iz6_a 215 SLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRN 294 (380)
T ss_dssp SSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSS
T ss_pred cCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEeccccccc
Confidence 6 78999999999999999998 456777888999999999999999999999999999999999998776654321
Q ss_pred ---CCCeEEEEECCCCCEEEEEeCCCeEEEEeCC
Q psy4391 196 ---NPPVSFVKFSPNGKYILAATLDNTLKLWDSY 226 (231)
Q Consensus 196 ---~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~~ 226 (231)
...+..++|+|+|++|++|+.||.|++||..
T Consensus 295 ~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~ 328 (380)
T 3iz6_a 295 DNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTL 328 (380)
T ss_dssp CCSSCSCSEEEECSSSSEEEEECTTSCEEEEETT
T ss_pred ccccCceEEEEECCCCCEEEEEECCCCEEEEECC
Confidence 2247889999999999999999999999963
No 20
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=2e-36 Score=229.49 Aligned_cols=205 Identities=23% Similarity=0.366 Sum_probs=176.2
Q ss_pred EeecccccceEEEEECCCCCEEEEEeCCCcEEEeecCCC--cEEEEEecccccEEEEEECCC--CCEEEEecCCCcEEEE
Q psy4391 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG--KFEKTISGHKLGISDVAWSSD--SRLLVSGSDDKTLKIW 96 (231)
Q Consensus 21 ~~~~~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~--~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~~g~i~~~ 96 (231)
..+.+|...|.+++|+|+|++|++|+.|+.|++|+.... +....+.+|...|.+++|+|+ +++|++++.|+.|++|
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iW 82 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIW 82 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEE
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEE
Confidence 356789999999999999999999999999999998643 566788899999999999863 8899999999999999
Q ss_pred eCCCce--eeeeecCCCcceEEEEECCC--CCEEEEeecCCcEEEEECCCCce--eeeccCCCCCeEEEEEcCC------
Q psy4391 97 ELSSGK--CLKTLKGHSNYVFCCNFNPQ--SNLIVSGSFDESVRIWDVRTGKC--LKTLPAHSDPVSAVHFNRD------ 164 (231)
Q Consensus 97 d~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~v~d~~~~~~--~~~~~~~~~~v~~~~~~~~------ 164 (231)
|+++++ ....+..|...+.+++|+|+ +.+|++++.|+.|++||++.+.. ...+..|...|.+++|+|+
T Consensus 83 d~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~ 162 (297)
T 2pm7_B 83 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDG 162 (297)
T ss_dssp EBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC-----
T ss_pred EcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccc
Confidence 998764 45566778889999999997 89999999999999999987632 3456788899999999997
Q ss_pred -------CCeEEEEecCCeEEEEeCCCCc----eeeeeecCCCCCeEEEEECCCC---CEEEEEeCCCeEEEEeCC
Q psy4391 165 -------GSLIVSSSYDGLCRIWDTASGQ----CLKTLIDDDNPPVSFVKFSPNG---KYILAATLDNTLKLWDSY 226 (231)
Q Consensus 165 -------~~~l~~~~~dg~i~v~d~~~~~----~~~~~~~~~~~~i~~~~~s~~g---~~l~~~s~d~~v~vwd~~ 226 (231)
+++|++|+.|+.|++||+++++ .... ...+...|..++|+|++ ++|++++.|+.|++||..
T Consensus 163 ~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~-l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~ 237 (297)
T 2pm7_B 163 EHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLEST-LEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQD 237 (297)
T ss_dssp -------CCEEEEEETTSCEEEEEEETTTTEEEEEEE-ECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEES
T ss_pred cCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEE-ecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeC
Confidence 5799999999999999998765 2233 33566789999999995 899999999999999964
No 21
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.6e-36 Score=230.22 Aligned_cols=201 Identities=30% Similarity=0.520 Sum_probs=169.3
Q ss_pred ccccceEEEEECCCCCEEEEEeCCCcEEEeecCC-------CcEEEEEecccccEEEEEECCCCCEEEEecCCCcEEEEe
Q psy4391 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-------GKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWE 97 (231)
Q Consensus 25 ~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d 97 (231)
+|...|.+++|+|++++|++|+.|+.|++|+... ......+.+|...|.+++|+|++++|++++.|+.|++||
T Consensus 56 ~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd 135 (330)
T 2hes_X 56 AHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWE 135 (330)
T ss_dssp CCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred CccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEe
Confidence 3999999999999999999999999999999843 344566788999999999999999999999999999999
Q ss_pred CCC----ceeeeeecCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCC--ceeeeccCCCCCeEEEEEcCC--CCeEE
Q psy4391 98 LSS----GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG--KCLKTLPAHSDPVSAVHFNRD--GSLIV 169 (231)
Q Consensus 98 ~~~----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~--~~~~~~~~~~~~v~~~~~~~~--~~~l~ 169 (231)
+.. .+.+..+..|...+.+++|+|++.+|++++.|+.|++||.+.+ +++..+..|.+.|.+++|+|+ +.+|+
T Consensus 136 ~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~ 215 (330)
T 2hes_X 136 TDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLC 215 (330)
T ss_dssp CCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEE
T ss_pred ccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEE
Confidence 943 2456778889999999999999999999999999999999876 567788899999999999998 67899
Q ss_pred EEecCCeEEEEeCCCC--------ceeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCC
Q psy4391 170 SSSYDGLCRIWDTASG--------QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSY 226 (231)
Q Consensus 170 ~~~~dg~i~v~d~~~~--------~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~~ 226 (231)
+++.|+.|++||+..+ .....+...+...|..++|++++ +|++++.||.|++||..
T Consensus 216 s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~ 279 (330)
T 2hes_X 216 SGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEV 279 (330)
T ss_dssp EEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEE
T ss_pred EEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcC
Confidence 9999999999998654 22333333366789999999765 79999999999999963
No 22
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-35 Score=228.29 Aligned_cols=205 Identities=28% Similarity=0.452 Sum_probs=171.5
Q ss_pred eeEEeecccccceEEEEECCCCCEEEEEeCCCcEEEeecCCC--cEEEEE-ec-ccccEEEEEECCCCCEEEEecCCCcE
Q psy4391 18 VLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG--KFEKTI-SG-HKLGISDVAWSSDSRLLVSGSDDKTL 93 (231)
Q Consensus 18 ~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~--~~~~~~-~~-~~~~v~~~~~~~~~~~l~~~~~~g~i 93 (231)
.+..++.+|.+.|.+++|+++ +|++|+.|+.|++|+...+ .....+ .+ |...|.+++|+|++++|++++.|+.|
T Consensus 5 ~~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v 82 (330)
T 2hes_X 5 NLIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTV 82 (330)
T ss_dssp EEEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCE
T ss_pred ccceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcE
Confidence 345677899999999999987 9999999999999999764 334445 34 88899999999999999999999999
Q ss_pred EEEeCCC-------ceeeeeecCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCC----ceeeeccCCCCCeEEEEEc
Q psy4391 94 KIWELSS-------GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG----KCLKTLPAHSDPVSAVHFN 162 (231)
Q Consensus 94 ~~~d~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~----~~~~~~~~~~~~v~~~~~~ 162 (231)
++||+.. .+....+.+|...|.+++|+|++++|++++.|+.|++||++.. +.+..+..|...|.+++|+
T Consensus 83 ~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~ 162 (330)
T 2hes_X 83 SIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWH 162 (330)
T ss_dssp EEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEEC
T ss_pred EEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEEC
Confidence 9999853 3456677889999999999999999999999999999999532 4566778899999999999
Q ss_pred CCCCeEEEEecCCeEEEEeCCCC--ceeeeeecCCCCCeEEEEECCC--CCEEEEEeCCCeEEEEeC
Q psy4391 163 RDGSLIVSSSYDGLCRIWDTASG--QCLKTLIDDDNPPVSFVKFSPN--GKYILAATLDNTLKLWDS 225 (231)
Q Consensus 163 ~~~~~l~~~~~dg~i~v~d~~~~--~~~~~~~~~~~~~i~~~~~s~~--g~~l~~~s~d~~v~vwd~ 225 (231)
|++.+|++++.|+.|++||..++ +.+..+ ..+...|..++|+|+ +.+|++++.|+.|++||.
T Consensus 163 p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~ 228 (330)
T 2hes_X 163 PSEALLASSSYDDTVRIWKDYDDDWECVAVL-NGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKY 228 (330)
T ss_dssp SSSSEEEEEETTSCEEEEEEETTEEEEEEEE-CCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEE
T ss_pred CCCCEEEEEcCCCeEEEEECCCCCeeEEEEc-cCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEe
Confidence 99999999999999999998765 344443 345678999999999 778999999999999996
No 23
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=7.5e-36 Score=230.86 Aligned_cols=203 Identities=27% Similarity=0.512 Sum_probs=176.7
Q ss_pred cccccceEEEEECCCCCEEEEEeCCCcEEEeecCCCc--EEEEEecccccEEEEEECCCCCEEEEecCCCcEEEEeCCCc
Q psy4391 24 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK--FEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSG 101 (231)
Q Consensus 24 ~~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~~~ 101 (231)
.+|...|.+++|+|++++|++|+.|+.+++|+...+. ....+.+|...|.+++|+|++++|++++.|+.|++||+.++
T Consensus 58 ~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~ 137 (345)
T 3fm0_A 58 EGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEE 137 (345)
T ss_dssp SSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTT
T ss_pred cccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCC
Confidence 5899999999999999999999999999999987664 45677889999999999999999999999999999999865
Q ss_pred ---eeeeeecCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCc--eeeeccCCCCCeEEEEEcCCCCeEEEEecCCe
Q psy4391 102 ---KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK--CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGL 176 (231)
Q Consensus 102 ---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 176 (231)
+.+..+..|...+.+++|+|++.+|++++.|+.|++||++.++ ....+..|...|.+++|+|++++|++++.|+.
T Consensus 138 ~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~ 217 (345)
T 3fm0_A 138 DEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRT 217 (345)
T ss_dssp SCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred CCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCe
Confidence 3456677888999999999999999999999999999998775 34677889999999999999999999999999
Q ss_pred EEEEeCCCC---------------ceeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCC
Q psy4391 177 CRIWDTASG---------------QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSY 226 (231)
Q Consensus 177 i~v~d~~~~---------------~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~~ 226 (231)
|++||.... +++..+...+...|..++|+|++..|++++.|+.|++|+..
T Consensus 218 v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~ 282 (345)
T 3fm0_A 218 VRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQED 282 (345)
T ss_dssp EEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEEC
T ss_pred EEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeC
Confidence 999986322 12223333356679999999999999999999999999864
No 24
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=2.9e-36 Score=249.34 Aligned_cols=205 Identities=25% Similarity=0.425 Sum_probs=181.4
Q ss_pred EEeecccccceEEEEECCCCCEEEEEeCCCcEEEeecCCC--cEEEEEecccccEEEEEECCCCCEEEEecCC----CcE
Q psy4391 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG--KFEKTISGHKLGISDVAWSSDSRLLVSGSDD----KTL 93 (231)
Q Consensus 20 ~~~~~~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~----g~i 93 (231)
...+.+|...|++++|+|+|++||+|+.||.|++||..++ .....+.+|...|.+++|+|+++.|++++.+ +.|
T Consensus 52 ~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v 131 (611)
T 1nr0_A 52 TEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHV 131 (611)
T ss_dssp CEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEE
T ss_pred CeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEE
Confidence 3456799999999999999999999999999999998643 3455677888999999999999999988765 367
Q ss_pred EEEeCCCceeeeeecCCCcceEEEEECCCCC-EEEEeecCCcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeEEEEe
Q psy4391 94 KIWELSSGKCLKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSS 172 (231)
Q Consensus 94 ~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 172 (231)
++|| .++....+.+|...|.+++|+|++. .+++++.|+.|++||.+.++....+..|...|.+++|+|++++|++++
T Consensus 132 ~~wd--~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s 209 (611)
T 1nr0_A 132 FLFD--TGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTG 209 (611)
T ss_dssp EETT--TCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred EEee--CCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEE
Confidence 7777 4556677889999999999999987 599999999999999999888888999999999999999999999999
Q ss_pred cCCeEEEEeCCCCceeeeeec------CCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCC
Q psy4391 173 YDGLCRIWDTASGQCLKTLID------DDNPPVSFVKFSPNGKYILAATLDNTLKLWDSY 226 (231)
Q Consensus 173 ~dg~i~v~d~~~~~~~~~~~~------~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~~ 226 (231)
.|+.|++||+.+++....+.. .+...|..++|+|+|++|++++.|+.|++||..
T Consensus 210 ~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~ 269 (611)
T 1nr0_A 210 GDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVA 269 (611)
T ss_dssp TTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred CCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 999999999999887766633 466789999999999999999999999999964
No 25
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=2.4e-35 Score=231.76 Aligned_cols=200 Identities=34% Similarity=0.660 Sum_probs=177.4
Q ss_pred ccccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEeccc------------------ccEEEEEECCCCCEEEE
Q psy4391 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK------------------LGISDVAWSSDSRLLVS 86 (231)
Q Consensus 25 ~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~------------------~~v~~~~~~~~~~~l~~ 86 (231)
+|...|.+++|+|+|++|++|+ ++.+++|+..++.....+..+. ..|.+++|+|++++|++
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s 140 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT 140 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEE
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEE
Confidence 6999999999999999999876 7899999999888777665432 13889999999999999
Q ss_pred ecCCCcEEEEeCCCceeeeeecCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeeccCCCCCeEEEEEcC-CC
Q psy4391 87 GSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNR-DG 165 (231)
Q Consensus 87 ~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~-~~ 165 (231)
++.|+.|++||+.+++....+.+|...|.+++|+|++..|++++.|+.|++||+++++....+. +...+.+++|+| ++
T Consensus 141 ~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~ 219 (393)
T 1erj_A 141 GAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS-IEDGVTTVAVSPGDG 219 (393)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSTTC
T ss_pred EcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE-cCCCcEEEEEECCCC
Confidence 9999999999999999999999999999999999999999999999999999999998776665 456799999999 89
Q ss_pred CeEEEEecCCeEEEEeCCCCceeeeee------cCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCC
Q psy4391 166 SLIVSSSYDGLCRIWDTASGQCLKTLI------DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSY 226 (231)
Q Consensus 166 ~~l~~~~~dg~i~v~d~~~~~~~~~~~------~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~~ 226 (231)
+++++++.|+.|++||+++++.+..+. ..+...|.+++|+|+|++|++++.|+.|++||..
T Consensus 220 ~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~ 286 (393)
T 1erj_A 220 KYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQ 286 (393)
T ss_dssp CEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred CEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECC
Confidence 999999999999999999988766552 2355679999999999999999999999999963
No 26
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=1.1e-35 Score=228.40 Aligned_cols=206 Identities=25% Similarity=0.397 Sum_probs=177.0
Q ss_pred EEeecccccceEEEEECCCCCEEEEEeCCCcEEEeecCCC----cEEEEEecccccEEEEEECC--CCCEEEEecCCCcE
Q psy4391 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG----KFEKTISGHKLGISDVAWSS--DSRLLVSGSDDKTL 93 (231)
Q Consensus 20 ~~~~~~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~----~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~~g~i 93 (231)
+..+.+|.+.|++++|+|++++|++|+.||.|++|+..++ +....+.+|...|.+++|+| ++++|++++.||.|
T Consensus 4 ~~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v 83 (351)
T 3f3f_A 4 QPFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTV 83 (351)
T ss_dssp CCEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCE
T ss_pred cccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeE
Confidence 3445799999999999999999999999999999999765 35566778899999999999 69999999999999
Q ss_pred EEEeCCCc---------eeeeeecCCCcceEEEEECCC--CCEEEEeecCCcEEEEECCCCce-----------------
Q psy4391 94 KIWELSSG---------KCLKTLKGHSNYVFCCNFNPQ--SNLIVSGSFDESVRIWDVRTGKC----------------- 145 (231)
Q Consensus 94 ~~~d~~~~---------~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~v~d~~~~~~----------------- 145 (231)
++||+.++ +....+..|...+.+++|+|+ +.++++++.|+.|++||+++++.
T Consensus 84 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 163 (351)
T 3f3f_A 84 KLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPP 163 (351)
T ss_dssp EEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCC
T ss_pred EEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccccccccccc
Confidence 99999876 556777888999999999999 99999999999999999876542
Q ss_pred -------------------------------------------eeeccCCCCCeEEEEEcCCC----CeEEEEecCCeEE
Q psy4391 146 -------------------------------------------LKTLPAHSDPVSAVHFNRDG----SLIVSSSYDGLCR 178 (231)
Q Consensus 146 -------------------------------------------~~~~~~~~~~v~~~~~~~~~----~~l~~~~~dg~i~ 178 (231)
+..+..|...|.+++|+|++ ++|++++.||.|+
T Consensus 164 ~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~ 243 (351)
T 3f3f_A 164 ANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIR 243 (351)
T ss_dssp SSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEE
T ss_pred CCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEE
Confidence 23345678899999999998 8999999999999
Q ss_pred EEeCCCC----------------------------------------------ceeeeeecCCCCCeEEEEECCCCCEEE
Q psy4391 179 IWDTASG----------------------------------------------QCLKTLIDDDNPPVSFVKFSPNGKYIL 212 (231)
Q Consensus 179 v~d~~~~----------------------------------------------~~~~~~~~~~~~~i~~~~~s~~g~~l~ 212 (231)
+||+..+ +.+.. ...+...|..++|+|+|++|+
T Consensus 244 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~h~~~v~~~~~s~~~~~l~ 322 (351)
T 3f3f_A 244 IFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSE-HDDHNGEVWSVSWNLTGTILS 322 (351)
T ss_dssp EEEEEECC---------------------------------------CCSEEEEEEEE-ECTTSSCEEEEEECSSSCCEE
T ss_pred EEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEE-EecccccEEEEEEcCCCCEEE
Confidence 9998764 22222 234556799999999999999
Q ss_pred EEeCCCeEEEEeCC
Q psy4391 213 AATLDNTLKLWDSY 226 (231)
Q Consensus 213 ~~s~d~~v~vwd~~ 226 (231)
+++.||.|++||..
T Consensus 323 s~~~dg~v~iw~~~ 336 (351)
T 3f3f_A 323 SAGDDGKVRLWKAT 336 (351)
T ss_dssp EEETTSCEEEEEEC
T ss_pred EecCCCcEEEEecC
Confidence 99999999999964
No 27
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1e-35 Score=225.62 Aligned_cols=207 Identities=27% Similarity=0.391 Sum_probs=174.9
Q ss_pred EEeecccccceEEEEECCC--CCEEEEEeCCCcEEEeecCCCc--EEEEEecccccEEEEEECCC--CCEEEEecCCCcE
Q psy4391 20 KFTLAGHTKAVSSVKFSPN--GEWLASSSADKLIKIWGAYDGK--FEKTISGHKLGISDVAWSSD--SRLLVSGSDDKTL 93 (231)
Q Consensus 20 ~~~~~~h~~~i~~~~~~~~--~~~l~~~~~dg~i~i~~~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~~g~i 93 (231)
..++.+|.+.|.+++|+++ +++|++|+.|+.|++||..++. ....+..|...|.+++|+|+ +.+|++++.|+.|
T Consensus 46 ~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v 125 (297)
T 2pm7_B 46 IDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKV 125 (297)
T ss_dssp CEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEE
T ss_pred EEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcE
Confidence 3567799999999999874 8999999999999999998764 44556778889999999997 8899999999999
Q ss_pred EEEeCCCce--eeeeecCCCcceEEEEECCC-------------CCEEEEeecCCcEEEEECCCCc----eeeeccCCCC
Q psy4391 94 KIWELSSGK--CLKTLKGHSNYVFCCNFNPQ-------------SNLIVSGSFDESVRIWDVRTGK----CLKTLPAHSD 154 (231)
Q Consensus 94 ~~~d~~~~~--~~~~~~~~~~~v~~~~~~~~-------------~~~l~~~~~d~~i~v~d~~~~~----~~~~~~~~~~ 154 (231)
++||+.++. ....+..|...+.+++|+|+ +++|++++.|+.|++||+++++ ....+..|..
T Consensus 126 ~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~ 205 (297)
T 2pm7_B 126 SVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSD 205 (297)
T ss_dssp EEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSS
T ss_pred EEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCC
Confidence 999998753 23456788889999999997 5799999999999999998765 4567788999
Q ss_pred CeEEEEEcCCC---CeEEEEecCCeEEEEeCCCCce--eeeee--cCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCC
Q psy4391 155 PVSAVHFNRDG---SLIVSSSYDGLCRIWDTASGQC--LKTLI--DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSY 226 (231)
Q Consensus 155 ~v~~~~~~~~~---~~l~~~~~dg~i~v~d~~~~~~--~~~~~--~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~~ 226 (231)
.|.+++|+|++ .+|++++.|+.|++||+.+... ..... ..+...+..++|+|+|++|++++.|+.|++|+..
T Consensus 206 ~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 206 WVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp CEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred ceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence 99999999985 7999999999999999876431 11222 2345678999999999999999999999999853
No 28
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=2.8e-35 Score=241.49 Aligned_cols=201 Identities=42% Similarity=0.717 Sum_probs=181.9
Q ss_pred eEEeecccccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEecCCCcEEEEeC
Q psy4391 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWEL 98 (231)
Q Consensus 19 ~~~~~~~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~ 98 (231)
+..++.+|...|.+++|+|++++|++++.|+.|++|+. +++....+.+|...+.+++|+|+++++++++.|+.|++||.
T Consensus 377 ~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~ 455 (577)
T 2ymu_A 377 LLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR 455 (577)
T ss_dssp EEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred EEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC
Confidence 34456789999999999999999999999999999996 56777888889999999999999999999999999999997
Q ss_pred CCceeeeeecCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeEEEEecCCeEE
Q psy4391 99 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCR 178 (231)
Q Consensus 99 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 178 (231)
. ++.+..+..|...+.+++|+|++++|++++.|+.|++||. +++.+..+..|...|.+++|+|++++|++++.||.|+
T Consensus 456 ~-~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~ 533 (577)
T 2ymu_A 456 N-GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVK 533 (577)
T ss_dssp T-SCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEE
T ss_pred C-CCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEE
Confidence 4 5667788889999999999999999999999999999995 5778888999999999999999999999999999999
Q ss_pred EEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEe
Q psy4391 179 IWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224 (231)
Q Consensus 179 v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd 224 (231)
+||. +++.+..+. .+...|..++|+|||++|++++.|+.|++||
T Consensus 534 lwd~-~~~~~~~~~-~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 534 LWNR-NGQLLQTLT-GHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp EECT-TSCEEEEEE-CCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEeC-CCCEEEEEc-CCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 9996 566666654 4567899999999999999999999999998
No 29
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=4.2e-36 Score=235.14 Aligned_cols=208 Identities=26% Similarity=0.501 Sum_probs=181.7
Q ss_pred EEeecccccceEEEEECCCC-CEEEEEeCCCcEEEeecCCCcEEEEE-----ecccccEEEEEECC-CCCEEEEecCCCc
Q psy4391 20 KFTLAGHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDGKFEKTI-----SGHKLGISDVAWSS-DSRLLVSGSDDKT 92 (231)
Q Consensus 20 ~~~~~~h~~~i~~~~~~~~~-~~l~~~~~dg~i~i~~~~~~~~~~~~-----~~~~~~v~~~~~~~-~~~~l~~~~~~g~ 92 (231)
...+.+|.+.|.++.|+|++ ..|++|+.|+.|++||+.++.....+ .+|...+.+++|++ +++++++++.|+.
T Consensus 150 ~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~ 229 (380)
T 3iz6_a 150 SRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTT 229 (380)
T ss_dssp CCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSC
T ss_pred eeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCe
Confidence 34567999999999999975 57999999999999999998887776 56778899999987 7889999999999
Q ss_pred EEEEeCC-CceeeeeecCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeeccCCC-------CCeEEEEEcCC
Q psy4391 93 LKIWELS-SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHS-------DPVSAVHFNRD 164 (231)
Q Consensus 93 i~~~d~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~-------~~v~~~~~~~~ 164 (231)
|++||++ ..+.+..+.+|...|.+++|+|++.++++++.|+.|++||+++++.+..+..+. ..+.+++|+|+
T Consensus 230 v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 309 (380)
T 3iz6_a 230 VRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSIS 309 (380)
T ss_dssp EEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSS
T ss_pred EEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCC
Confidence 9999997 456777888999999999999999999999999999999999998776654432 24889999999
Q ss_pred CCeEEEEecCCeEEEEeCCCCceeeeee---cCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCC
Q psy4391 165 GSLIVSSSYDGLCRIWDTASGQCLKTLI---DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSYP 227 (231)
Q Consensus 165 ~~~l~~~~~dg~i~v~d~~~~~~~~~~~---~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~~~ 227 (231)
++++++|+.||.|++||+..++....+. ..+...|.+++|+|+|++|++|+.|+.|++|+...
T Consensus 310 g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~ 375 (380)
T 3iz6_a 310 GRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSG 375 (380)
T ss_dssp SSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCS
T ss_pred CCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCC
Confidence 9999999999999999999888766552 34667899999999999999999999999999743
No 30
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.5e-35 Score=230.85 Aligned_cols=199 Identities=16% Similarity=0.225 Sum_probs=168.1
Q ss_pred cccceEEEEECCCCCEEEEE--eCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEecCCCcEEEEeCCCcee
Q psy4391 26 HTKAVSSVKFSPNGEWLASS--SADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKC 103 (231)
Q Consensus 26 h~~~i~~~~~~~~~~~l~~~--~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~ 103 (231)
+...+.+++|+|||+++++| +.|+.|++||..+++....+. |...|.+++|+|+|+++++++.+ .+.+|+..+++.
T Consensus 132 ~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~ 209 (365)
T 4h5i_A 132 ADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSC 209 (365)
T ss_dssp TTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCE
T ss_pred cccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEeccce-eEEEEEeccCcc
Confidence 34458899999999987654 478999999999988877775 56679999999999999998865 556666666554
Q ss_pred ee--eecCCCcceEEEEECCCCCEEEEeecCC----cEEEEECCCCce----eeeccCCCCCeEEEEEcCCCCeEEEEec
Q psy4391 104 LK--TLKGHSNYVFCCNFNPQSNLIVSGSFDE----SVRIWDVRTGKC----LKTLPAHSDPVSAVHFNRDGSLIVSSSY 173 (231)
Q Consensus 104 ~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~----~i~v~d~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 173 (231)
.. ....|...+.+++|+|+++.+++++.++ .+++||+..... ...+..|..+|++++|+|+|++||+|+.
T Consensus 210 ~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~ 289 (365)
T 4h5i_A 210 IARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASN 289 (365)
T ss_dssp EEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEET
T ss_pred eeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcC
Confidence 43 3345778899999999999999998887 578899876653 3456678889999999999999999999
Q ss_pred CCeEEEEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCC
Q psy4391 174 DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSY 226 (231)
Q Consensus 174 dg~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~~ 226 (231)
|+.|++||+.+++.+..+...+..+|++++|+|||++||+++.|++|+|||..
T Consensus 290 D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip 342 (365)
T 4h5i_A 290 DNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLP 342 (365)
T ss_dssp TSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECC
T ss_pred CCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcC
Confidence 99999999999998888777778899999999999999999999999999963
No 31
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.4e-34 Score=220.47 Aligned_cols=208 Identities=38% Similarity=0.669 Sum_probs=183.9
Q ss_pred EEeecccccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEecCCCcEEEEeCC
Q psy4391 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELS 99 (231)
Q Consensus 20 ~~~~~~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~ 99 (231)
...+.+|...|.+++|+|++++|++++.||.|++||..+++....+.+|...+.+++|+|+++++++++.|+.|++||++
T Consensus 58 ~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~ 137 (312)
T 4ery_A 58 EKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 137 (312)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETT
T ss_pred chhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECC
Confidence 34567899999999999999999999999999999999999989999999999999999999999999999999999999
Q ss_pred CceeeeeecCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeecc-CCCCCeEEEEEcCCCCeEEEEecCCeEE
Q psy4391 100 SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLP-AHSDPVSAVHFNRDGSLIVSSSYDGLCR 178 (231)
Q Consensus 100 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 178 (231)
+++....+..|...+.++.|+|+++++++++.|+.|++||+++++.+..+. .+..++..++|+|+++++++++.||.|+
T Consensus 138 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~ 217 (312)
T 4ery_A 138 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLK 217 (312)
T ss_dssp TCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEE
T ss_pred CCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEE
Confidence 999888998899999999999999999999999999999999988776654 4556899999999999999999999999
Q ss_pred EEeCCCCceeeeeecCCCC--CeEEEEECCCCCEEEEEeCCCeEEEEeCCC
Q psy4391 179 IWDTASGQCLKTLIDDDNP--PVSFVKFSPNGKYILAATLDNTLKLWDSYP 227 (231)
Q Consensus 179 v~d~~~~~~~~~~~~~~~~--~i~~~~~s~~g~~l~~~s~d~~v~vwd~~~ 227 (231)
+||+.+++.+..+..+... .+......+++++|++++.||.|++||...
T Consensus 218 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~ 268 (312)
T 4ery_A 218 LWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQT 268 (312)
T ss_dssp EEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTT
T ss_pred EEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCC
Confidence 9999999877766543322 222333457889999999999999999743
No 32
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=2.1e-34 Score=222.50 Aligned_cols=203 Identities=23% Similarity=0.444 Sum_probs=173.5
Q ss_pred EEeecccccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEecCCCcEEEEeCC
Q psy4391 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELS 99 (231)
Q Consensus 20 ~~~~~~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~ 99 (231)
...+.+|...|.+++|+|++.++++|+.|+.|++||..+++....+.+|...|.+++|+|++++|++++.|+.|++||+.
T Consensus 69 ~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~ 148 (343)
T 2xzm_R 69 HKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNIL 148 (343)
T ss_dssp EEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESS
T ss_pred cchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEecc
Confidence 45678999999999999999999999999999999999999988999999999999999999999999999999999998
Q ss_pred Cceeeeee--cCCCcceEEEEECCCC----------CEEEEeecCCcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCe
Q psy4391 100 SGKCLKTL--KGHSNYVFCCNFNPQS----------NLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSL 167 (231)
Q Consensus 100 ~~~~~~~~--~~~~~~v~~~~~~~~~----------~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 167 (231)
........ ..|...+.++.|+|++ .++++++.|+.|++||. ..+....+..|...|.+++|+|++++
T Consensus 149 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~~v~~~~~s~~g~~ 227 (343)
T 2xzm_R 149 GECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHESNVNHLSISPNGKY 227 (343)
T ss_dssp SCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSSCEEEEEECTTSSE
T ss_pred CCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCccccceEEEECCCCCE
Confidence 54332221 2577889999999987 78999999999999994 45666778889999999999999999
Q ss_pred EEEEecCCeEEEEeCCCCc-eeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCC
Q psy4391 168 IVSSSYDGLCRIWDTASGQ-CLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSY 226 (231)
Q Consensus 168 l~~~~~dg~i~v~d~~~~~-~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~~ 226 (231)
|++++.||.|++||+.... ....+. ....+..++|+|++++++++ .|+.|++||..
T Consensus 228 l~sgs~dg~v~iwd~~~~~~~~~~~~--~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~ 284 (343)
T 2xzm_R 228 IATGGKDKKLLIWDILNLTYPQREFD--AGSTINQIAFNPKLQWVAVG-TDQGVKIFNLM 284 (343)
T ss_dssp EEEEETTCEEEEEESSCCSSCSEEEE--CSSCEEEEEECSSSCEEEEE-ESSCEEEEESS
T ss_pred EEEEcCCCeEEEEECCCCcccceeec--CCCcEEEEEECCCCCEEEEE-CCCCEEEEEeC
Confidence 9999999999999995433 333322 23468999999999988755 58899999964
No 33
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=3.3e-35 Score=243.04 Aligned_cols=207 Identities=23% Similarity=0.396 Sum_probs=182.0
Q ss_pred eEEeecccccceEEEEECCCCCEEEEEeCC----CcEEEeecCCCcEEEEEecccccEEEEEECCCCC-EEEEecCCCcE
Q psy4391 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSAD----KLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR-LLVSGSDDKTL 93 (231)
Q Consensus 19 ~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d----g~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~~g~i 93 (231)
+..++.+|.+.|.+++|+|+|++|++++.+ +.|++|+. +.....+.+|...|.+++|+|++. .|++++.|+.|
T Consensus 95 ~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~--~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v 172 (611)
T 1nr0_A 95 LKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDT--GTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTV 172 (611)
T ss_dssp EEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTT--CCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCE
T ss_pred eeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeC--CCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeE
Confidence 445677899999999999999999988765 47888874 445566788999999999999987 59999999999
Q ss_pred EEEeCCCceeeeeecCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeecc-------CCCCCeEEEEEcCCCC
Q psy4391 94 KIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLP-------AHSDPVSAVHFNRDGS 166 (231)
Q Consensus 94 ~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-------~~~~~v~~~~~~~~~~ 166 (231)
++||..+++....+.+|...|.+++|+|++++|++++.|+.|++||+.+++.+..+. .|.+.|.+++|+|+++
T Consensus 173 ~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~ 252 (611)
T 1nr0_A 173 AIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGT 252 (611)
T ss_dssp EEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSS
T ss_pred EEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCC
Confidence 999999998888999999999999999999999999999999999999998877763 6899999999999999
Q ss_pred eEEEEecCCeEEEEeCCCCceeeeee------------------------------------------cCCCCCeEEEEE
Q psy4391 167 LIVSSSYDGLCRIWDTASGQCLKTLI------------------------------------------DDDNPPVSFVKF 204 (231)
Q Consensus 167 ~l~~~~~dg~i~v~d~~~~~~~~~~~------------------------------------------~~~~~~i~~~~~ 204 (231)
+|++++.|+.|++||+.+++.+..+. ..+...|..++|
T Consensus 253 ~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~ 332 (611)
T 1nr0_A 253 KIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSS 332 (611)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEE
T ss_pred EEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEE
Confidence 99999999999999999876554331 235567899999
Q ss_pred CCCCCEEEEEeCCCeEEEEeCCC
Q psy4391 205 SPNGKYILAATLDNTLKLWDSYP 227 (231)
Q Consensus 205 s~~g~~l~~~s~d~~v~vwd~~~ 227 (231)
+|+|++|++++.|+.|++||...
T Consensus 333 spdg~~l~s~s~D~~v~~Wd~~~ 355 (611)
T 1nr0_A 333 SADGKTLFSADAEGHINSWDIST 355 (611)
T ss_dssp CTTSSEEEEEETTSCEEEEETTT
T ss_pred eCCCCEEEEEeCCCcEEEEECCC
Confidence 99999999999999999999643
No 34
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.1e-34 Score=228.13 Aligned_cols=210 Identities=28% Similarity=0.508 Sum_probs=179.4
Q ss_pred eEEeecccccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECC-CCCEEEEecCCCcEEEEe
Q psy4391 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS-DSRLLVSGSDDKTLKIWE 97 (231)
Q Consensus 19 ~~~~~~~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~g~i~~~d 97 (231)
....+.+|...|.+++|+|++++|++++.|+.|++||..+++....+. +...+..++|+| +++++++++.|+.|++||
T Consensus 157 ~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd 235 (393)
T 1erj_A 157 IVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWD 235 (393)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEE
T ss_pred EEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEE
Confidence 335577899999999999999999999999999999999887766665 345789999999 899999999999999999
Q ss_pred CCCceeeeee-------cCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCC------------ceeeeccCCCCCeEE
Q psy4391 98 LSSGKCLKTL-------KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG------------KCLKTLPAHSDPVSA 158 (231)
Q Consensus 98 ~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~------------~~~~~~~~~~~~v~~ 158 (231)
+.+++.+..+ .+|...+.+++|+|++++|++++.|+.|++||++.. .+...+..|...|.+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 315 (393)
T 1erj_A 236 SETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLS 315 (393)
T ss_dssp TTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEE
T ss_pred CCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEE
Confidence 9988776665 467888999999999999999999999999999763 234456678899999
Q ss_pred EEEcCCCCeEEEEecCCeEEEEeCCCCceeeeeecCCCCCeEEEEECC------CCCEEEEEeCCCeEEEEeCCCCCC
Q psy4391 159 VHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP------NGKYILAATLDNTLKLWDSYPCLP 230 (231)
Q Consensus 159 ~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~------~g~~l~~~s~d~~v~vwd~~~~~~ 230 (231)
++|+|++.+|++++.|+.|++||+.+++.+..+. .+...|..++|++ ++++|++|+.||.|++|+.....|
T Consensus 316 ~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~-~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~~~p 392 (393)
T 1erj_A 316 VATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQ-GHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKKIAP 392 (393)
T ss_dssp EEECGGGCEEEEEETTSEEEEEETTTCCEEEEEE-CCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEEC--
T ss_pred EEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEC-CCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECcccccCC
Confidence 9999999999999999999999999998777665 4556788999876 688999999999999999754433
No 35
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-34 Score=223.74 Aligned_cols=214 Identities=22% Similarity=0.410 Sum_probs=187.6
Q ss_pred CCCccceeEEeecccccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEecCCC
Q psy4391 12 NPKPNYVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDK 91 (231)
Q Consensus 12 ~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g 91 (231)
+..........+.+|.+.|++++|+|++++|++++.||.|++|+..+++....+.+|...|.+++|+|++++|++++.||
T Consensus 17 ~~~G~~~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg 96 (369)
T 3zwl_B 17 YFQGSHMKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADY 96 (369)
T ss_dssp CSSCCSEEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTT
T ss_pred EEeccccccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCC
Confidence 34444556678899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEeCCCceeeeeecCCCcceEEEEECCCCCEEEEeecC-----CcEEEEECCCCce-----------eeeccCCCC-
Q psy4391 92 TLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD-----ESVRIWDVRTGKC-----------LKTLPAHSD- 154 (231)
Q Consensus 92 ~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~v~d~~~~~~-----------~~~~~~~~~- 154 (231)
.|++||+.+++....+. +...+.++.|+|+++.+++++.+ +.|++||++.+.. ...+..+.+
T Consensus 97 ~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (369)
T 3zwl_B 97 SIKLWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGL 175 (369)
T ss_dssp EEEEEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTC
T ss_pred eEEEEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCc
Confidence 99999999998888877 67889999999999999999998 9999999976542 233344444
Q ss_pred -CeEEEEEcCCCCeEEEEecCCeEEEEeCCC-CceeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCC
Q psy4391 155 -PVSAVHFNRDGSLIVSSSYDGLCRIWDTAS-GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSYP 227 (231)
Q Consensus 155 -~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~-~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~~~ 227 (231)
.+.+++|+|+++++++++.||.|++||+.+ .+.+..+ ..+...+..++|+|++++|++++.|+.|++||...
T Consensus 176 ~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~ 249 (369)
T 3zwl_B 176 DAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSI-DLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVST 249 (369)
T ss_dssp CCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEE-ECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred cceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEE-ecCCCceeEEEECCCCCEEEEecCCceEEEEECCC
Confidence 899999999999999999999999999998 5555444 44566899999999999999999999999999743
No 36
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=5.8e-36 Score=228.84 Aligned_cols=207 Identities=21% Similarity=0.327 Sum_probs=170.5
Q ss_pred EEeecccccceEEEEECCCCCEEEEEeCCCcEEEeecCCCc--EEEEEecccccEEEEEECC--CCCEEEEecCCCcEEE
Q psy4391 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK--FEKTISGHKLGISDVAWSS--DSRLLVSGSDDKTLKI 95 (231)
Q Consensus 20 ~~~~~~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~--~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~~g~i~~ 95 (231)
...+.+|.+.|.+++|+|+|++|++|+.|+.|++||..++. ....+.+|...|.+++|+| ++++|++++.|+.|++
T Consensus 6 ~~~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~i 85 (316)
T 3bg1_A 6 NTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVII 85 (316)
T ss_dssp --------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEE
T ss_pred eeecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEE
Confidence 34567899999999999999999999999999999997764 3566789999999999986 4889999999999999
Q ss_pred EeCCCce--eeeeecCCCcceEEEEECCC--CCEEEEeecCCcEEEEECCCCce---eeeccCCCCCeEEEEEcCC----
Q psy4391 96 WELSSGK--CLKTLKGHSNYVFCCNFNPQ--SNLIVSGSFDESVRIWDVRTGKC---LKTLPAHSDPVSAVHFNRD---- 164 (231)
Q Consensus 96 ~d~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~v~d~~~~~~---~~~~~~~~~~v~~~~~~~~---- 164 (231)
||+++++ ....+.+|...|.+++|+|+ +.+|++++.|+.|++||++.+.. ...+..|...+.+++|+|+
T Consensus 86 Wd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 165 (316)
T 3bg1_A 86 WREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPG 165 (316)
T ss_dssp ECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC-
T ss_pred EECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCc
Confidence 9998763 55667788899999999998 78999999999999999987632 3455678889999999997
Q ss_pred -------------CCeEEEEecCCeEEEEeCCCCc---eeeeeecCCCCCeEEEEECCCC----CEEEEEeCCCeEEEEe
Q psy4391 165 -------------GSLIVSSSYDGLCRIWDTASGQ---CLKTLIDDDNPPVSFVKFSPNG----KYILAATLDNTLKLWD 224 (231)
Q Consensus 165 -------------~~~l~~~~~dg~i~v~d~~~~~---~~~~~~~~~~~~i~~~~~s~~g----~~l~~~s~d~~v~vwd 224 (231)
+++|++++.|+.|++||+.... .+..+ ..+...|..++|+|++ ++|++++.|+.|++||
T Consensus 166 ~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l-~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~ 244 (316)
T 3bg1_A 166 SLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKL-EAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWT 244 (316)
T ss_dssp -----CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECC-BCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEE
T ss_pred cccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeec-ccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEE
Confidence 4789999999999999997542 33333 3456789999999987 8999999999999998
Q ss_pred CCC
Q psy4391 225 SYP 227 (231)
Q Consensus 225 ~~~ 227 (231)
...
T Consensus 245 ~~~ 247 (316)
T 3bg1_A 245 CDD 247 (316)
T ss_dssp CSS
T ss_pred ccC
Confidence 643
No 37
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1.1e-35 Score=227.29 Aligned_cols=208 Identities=26% Similarity=0.390 Sum_probs=174.4
Q ss_pred eEEeecccccceEEEEECC--CCCEEEEEeCCCcEEEeecCCCc--EEEEEecccccEEEEEECCC--CCEEEEecCCCc
Q psy4391 19 LKFTLAGHTKAVSSVKFSP--NGEWLASSSADKLIKIWGAYDGK--FEKTISGHKLGISDVAWSSD--SRLLVSGSDDKT 92 (231)
Q Consensus 19 ~~~~~~~h~~~i~~~~~~~--~~~~l~~~~~dg~i~i~~~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~~g~ 92 (231)
...++.+|...|.+++|++ ++++|++|+.|+.|++||..++. ....+.+|...|.+++|+|+ +.+|++++.|+.
T Consensus 49 ~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~ 128 (316)
T 3bg1_A 49 LIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGA 128 (316)
T ss_dssp EEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSC
T ss_pred EEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCC
Confidence 3456789999999999986 48999999999999999998763 45567788889999999997 789999999999
Q ss_pred EEEEeCCCce---eeeeecCCCcceEEEEECCC-----------------CCEEEEeecCCcEEEEECCCC---ceeeec
Q psy4391 93 LKIWELSSGK---CLKTLKGHSNYVFCCNFNPQ-----------------SNLIVSGSFDESVRIWDVRTG---KCLKTL 149 (231)
Q Consensus 93 i~~~d~~~~~---~~~~~~~~~~~v~~~~~~~~-----------------~~~l~~~~~d~~i~v~d~~~~---~~~~~~ 149 (231)
|++||+..+. ....+..|...+.++.|+|+ +.+|++++.|+.|++||++.+ +.+..+
T Consensus 129 i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l 208 (316)
T 3bg1_A 129 ISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKL 208 (316)
T ss_dssp EEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECC
T ss_pred EEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeec
Confidence 9999998753 23455677788888999987 468999999999999999755 356678
Q ss_pred cCCCCCeEEEEEcCCC----CeEEEEecCCeEEEEeCCCC---ceeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEE
Q psy4391 150 PAHSDPVSAVHFNRDG----SLIVSSSYDGLCRIWDTASG---QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 222 (231)
Q Consensus 150 ~~~~~~v~~~~~~~~~----~~l~~~~~dg~i~v~d~~~~---~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~v 222 (231)
..|...|.+++|+|++ .+|++++.|+.|++||+.+. +........+...+..++|+|+|++|++++.|+.|++
T Consensus 209 ~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~l 288 (316)
T 3bg1_A 209 EAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTL 288 (316)
T ss_dssp BCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEE
T ss_pred ccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEE
Confidence 8899999999999986 78999999999999998762 1112222334668999999999999999999999999
Q ss_pred EeCC
Q psy4391 223 WDSY 226 (231)
Q Consensus 223 wd~~ 226 (231)
|+..
T Consensus 289 w~~~ 292 (316)
T 3bg1_A 289 WKES 292 (316)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9953
No 38
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-34 Score=225.47 Aligned_cols=208 Identities=23% Similarity=0.361 Sum_probs=180.6
Q ss_pred EEeecccccceEEEEECCCCCEEEEEeCCCcEEEeecC--CCcEEEEEecccccEEEEEECCC--CCEEEEecCCCcEEE
Q psy4391 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY--DGKFEKTISGHKLGISDVAWSSD--SRLLVSGSDDKTLKI 95 (231)
Q Consensus 20 ~~~~~~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~~g~i~~ 95 (231)
...+.+|...|++++|+|++++|++|+.||.|++|+.. +......+.+|...|.+++|+++ +++|++++.||.|++
T Consensus 4 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~i 83 (379)
T 3jrp_A 4 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLI 83 (379)
T ss_dssp -CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEE
T ss_pred cEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEE
Confidence 35667999999999999999999999999999999997 44566677889999999999977 899999999999999
Q ss_pred EeCCCce--eeeeecCCCcceEEEEECCC--CCEEEEeecCCcEEEEECCCCce--eeeccCCCCCeEEEEEcC------
Q psy4391 96 WELSSGK--CLKTLKGHSNYVFCCNFNPQ--SNLIVSGSFDESVRIWDVRTGKC--LKTLPAHSDPVSAVHFNR------ 163 (231)
Q Consensus 96 ~d~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~v~d~~~~~~--~~~~~~~~~~v~~~~~~~------ 163 (231)
||+.+++ ....+..|...+.+++|+|+ +.++++++.|+.|++||++.+.. ...+..|...+.+++|+|
T Consensus 84 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 163 (379)
T 3jrp_A 84 WKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEED 163 (379)
T ss_dssp EEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----
T ss_pred EEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCcccccc
Confidence 9999886 66777788899999999999 99999999999999999988743 345567889999999999
Q ss_pred -------CCCeEEEEecCCeEEEEeCCCCceee---eeecCCCCCeEEEEECCC---CCEEEEEeCCCeEEEEeCCC
Q psy4391 164 -------DGSLIVSSSYDGLCRIWDTASGQCLK---TLIDDDNPPVSFVKFSPN---GKYILAATLDNTLKLWDSYP 227 (231)
Q Consensus 164 -------~~~~l~~~~~dg~i~v~d~~~~~~~~---~~~~~~~~~i~~~~~s~~---g~~l~~~s~d~~v~vwd~~~ 227 (231)
++.++++++.||.|++||+++++... .....+...+..++|+|+ +++|++++.||.|++||...
T Consensus 164 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~ 240 (379)
T 3jrp_A 164 GEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDN 240 (379)
T ss_dssp ------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred ccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCC
Confidence 69999999999999999998765322 223345678999999999 89999999999999999643
No 39
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=3.9e-34 Score=223.86 Aligned_cols=207 Identities=18% Similarity=0.340 Sum_probs=180.5
Q ss_pred cceeEEeecccccceEEEEECCCC-CEEEEEeCCCcEEEeecCCCcEEEEEe--cccccEEEEEECC-CCCEEEEecCCC
Q psy4391 16 NYVLKFTLAGHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDGKFEKTIS--GHKLGISDVAWSS-DSRLLVSGSDDK 91 (231)
Q Consensus 16 ~~~~~~~~~~h~~~i~~~~~~~~~-~~l~~~~~dg~i~i~~~~~~~~~~~~~--~~~~~v~~~~~~~-~~~~l~~~~~~g 91 (231)
.+.+...+.+|...|.+++|+|++ ++|++|+.||.|++|+..++.....+. +|...|.+++|+| +++++++++.|+
T Consensus 62 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~ 141 (383)
T 3ei3_B 62 SYKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRG 141 (383)
T ss_dssp TCEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTT
T ss_pred ccceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCC
Confidence 345566778999999999999999 899999999999999998887776665 5888999999999 778999999999
Q ss_pred cEEEEeCCCceeeeeecC---CCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeeccCCCCCeEEEEEcCCCC-e
Q psy4391 92 TLKIWELSSGKCLKTLKG---HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGS-L 167 (231)
Q Consensus 92 ~i~~~d~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~-~ 167 (231)
.|++||+.+. ....+.. +...+.+++|+|+++++++++.|+.|++||++ ++.+..+..|...|.+++|+|+++ +
T Consensus 142 ~i~iwd~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~h~~~v~~~~~~~~~~~~ 219 (383)
T 3ei3_B 142 ATTLRDFSGS-VIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD-GHEIFKEKLHKAKVTHAEFNPRCDWL 219 (383)
T ss_dssp EEEEEETTSC-EEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT-SCEEEEEECSSSCEEEEEECSSCTTE
T ss_pred EEEEEECCCC-ceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC-CCEEEEeccCCCcEEEEEECCCCCCE
Confidence 9999999864 3444433 34779999999999999999999999999994 677888889999999999999999 8
Q ss_pred EEEEecCCeEEEEeCCC----CceeeeeecCCCCCeEEEEECC-CCCEEEEEeCCCeEEEEeCC
Q psy4391 168 IVSSSYDGLCRIWDTAS----GQCLKTLIDDDNPPVSFVKFSP-NGKYILAATLDNTLKLWDSY 226 (231)
Q Consensus 168 l~~~~~dg~i~v~d~~~----~~~~~~~~~~~~~~i~~~~~s~-~g~~l~~~s~d~~v~vwd~~ 226 (231)
+++++.|+.|++||+++ +..+..+ .+...+..++|+| +|++|++++.|+.|++||..
T Consensus 220 l~s~~~d~~i~iwd~~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~ 281 (383)
T 3ei3_B 220 MATSSVDATVKLWDLRNIKDKNSYIAEM--PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSY 281 (383)
T ss_dssp EEEEETTSEEEEEEGGGCCSTTCEEEEE--ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETT
T ss_pred EEEEeCCCEEEEEeCCCCCcccceEEEe--cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECC
Confidence 99999999999999987 4444444 3567899999999 99999999999999999964
No 40
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.2e-36 Score=236.01 Aligned_cols=201 Identities=15% Similarity=0.190 Sum_probs=168.4
Q ss_pred ccccceEEEEECCCCCEEEEEeCCCcEEEeecCCC--cEEEEEecccccEEEEEECCCCCEEEEecCCCcEEEEeCCCce
Q psy4391 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG--KFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGK 102 (231)
Q Consensus 25 ~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~ 102 (231)
.|...|.+++|+|++++|++|+.||.|++|+..++ .....+.+|...|.+++|+|++++|++++.|+.|++||+.+++
T Consensus 9 ~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~ 88 (377)
T 3dwl_C 9 ILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDG 88 (377)
T ss_dssp ECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------
T ss_pred cCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCC
Confidence 35678999999999999999999999999999877 5666777899999999999999999999999999999999876
Q ss_pred ---eeeeecCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCc---eeeeccC-CCCCeEEEEEcCCCCeEEEEecCC
Q psy4391 103 ---CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK---CLKTLPA-HSDPVSAVHFNRDGSLIVSSSYDG 175 (231)
Q Consensus 103 ---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~---~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg 175 (231)
....+..|...+.+++|+|+++++++++.|+.|++||++.++ ....+.. |...|.+++|+|++++|++++.|+
T Consensus 89 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~ 168 (377)
T 3dwl_C 89 TWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADR 168 (377)
T ss_dssp CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSS
T ss_pred ceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCC
Confidence 556677888999999999999999999999999999999876 3566666 899999999999999999999999
Q ss_pred eEEEEeCCC------------------CceeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCC
Q psy4391 176 LCRIWDTAS------------------GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSYP 227 (231)
Q Consensus 176 ~i~v~d~~~------------------~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~~~ 227 (231)
.|++||+.. ++.+..+ .+...+..++|+|+|++|++++.||.|++||...
T Consensus 169 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~ 236 (377)
T 3dwl_C 169 KAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY--PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSA 236 (377)
T ss_dssp CEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC--CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECS
T ss_pred EEEEEEEEecccCCCccccccccccchhhhhhcc--cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCC
Confidence 999999853 3333333 5667799999999999999999999999999643
No 41
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=2.7e-35 Score=234.36 Aligned_cols=209 Identities=17% Similarity=0.241 Sum_probs=173.0
Q ss_pred ceeEEeecccccceEEEEECC-CCCEEEEEeCCCcEEEeecCCCcEE--EEEecccccEEEEEECC-CCCEEEEecCCCc
Q psy4391 17 YVLKFTLAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFE--KTISGHKLGISDVAWSS-DSRLLVSGSDDKT 92 (231)
Q Consensus 17 ~~~~~~~~~h~~~i~~~~~~~-~~~~l~~~~~dg~i~i~~~~~~~~~--~~~~~~~~~v~~~~~~~-~~~~l~~~~~~g~ 92 (231)
+.+.....+|...|++++|+| ++++||+|+.||.|++||..++... ..+.+|...|.+++|+| ++++|++++.||.
T Consensus 109 ~~~~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~ 188 (435)
T 4e54_B 109 YRILQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGT 188 (435)
T ss_dssp TTSCCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSC
T ss_pred eeecccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCE
Confidence 334445567889999999999 5678999999999999998766543 34457889999999998 6889999999999
Q ss_pred EEEEeCCCceeeeeecC--CCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeeccCCCCCeEEEEEcCCCC-eEE
Q psy4391 93 LKIWELSSGKCLKTLKG--HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGS-LIV 169 (231)
Q Consensus 93 i~~~d~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~ 169 (231)
|++||++++........ +...+.+++|+|++.+|++|+.||.|++||++. +.+..+..|...|.+++|+|++. +++
T Consensus 189 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~-~~~~~~~~h~~~v~~v~~~p~~~~~~~ 267 (435)
T 4e54_B 189 TRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG-KELWNLRMHKKKVTHVALNPCCDWFLA 267 (435)
T ss_dssp EEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS-CBCCCSBCCSSCEEEEEECTTCSSEEE
T ss_pred EEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc-ceeEEEecccceEEeeeecCCCceEEE
Confidence 99999987654333322 234567889999999999999999999999974 55677889999999999999886 677
Q ss_pred EEecCCeEEEEeCCCCceeeeee--cCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCC
Q psy4391 170 SSSYDGLCRIWDTASGQCLKTLI--DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSY 226 (231)
Q Consensus 170 ~~~~dg~i~v~d~~~~~~~~~~~--~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~~ 226 (231)
+++.|+.|++||+++.+....+. ..+..+|.+++|+|+|++|++++.||.|+|||..
T Consensus 268 s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~ 326 (435)
T 4e54_B 268 TASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSAS 326 (435)
T ss_dssp EEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESS
T ss_pred EecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECC
Confidence 89999999999998876544332 3456789999999999999999999999999963
No 42
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=4.5e-34 Score=239.37 Aligned_cols=210 Identities=30% Similarity=0.469 Sum_probs=183.7
Q ss_pred ceeEEeecccccceEEEEECCCC-CEEEEEeCCCcEEEeecCCC-----cEEEEEecccccEEEEEECCCCCEEEEecCC
Q psy4391 17 YVLKFTLAGHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDG-----KFEKTISGHKLGISDVAWSSDSRLLVSGSDD 90 (231)
Q Consensus 17 ~~~~~~~~~h~~~i~~~~~~~~~-~~l~~~~~dg~i~i~~~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~ 90 (231)
..++..+.+|.+.|++++|+|++ ++|++|+.|+.|++|+.... .....+.+|...|.+++|+|++++|++++.|
T Consensus 372 l~~~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~D 451 (694)
T 3dm0_A 372 LVLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWD 451 (694)
T ss_dssp SEEEEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred cchhhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCC
Confidence 34556688999999999999865 69999999999999998643 3456788999999999999999999999999
Q ss_pred CcEEEEeCCCceeeeeecCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeee---ccCCCCCeEEEEEcCCC--
Q psy4391 91 KTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKT---LPAHSDPVSAVHFNRDG-- 165 (231)
Q Consensus 91 g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~---~~~~~~~v~~~~~~~~~-- 165 (231)
+.|++||+.+++..+.+.+|...|.+++|+|+++.|++++.|+.|++||+........ ...|...|.+++|+|++
T Consensus 452 g~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 531 (694)
T 3dm0_A 452 GELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQ 531 (694)
T ss_dssp SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSS
T ss_pred CcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCc
Confidence 9999999999999999999999999999999999999999999999999875543322 24677889999999987
Q ss_pred CeEEEEecCCeEEEEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCC
Q psy4391 166 SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSYP 227 (231)
Q Consensus 166 ~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~~~ 227 (231)
..+++++.|+.|++||+++++....+. .+...|.+++|+|+|++|++++.||.|++||...
T Consensus 532 ~~l~s~s~d~~v~vwd~~~~~~~~~~~-~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~ 592 (694)
T 3dm0_A 532 PTIVSASWDKTVKVWNLSNCKLRSTLA-GHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAE 592 (694)
T ss_dssp CEEEEEETTSCEEEEETTTCCEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSBCEEEETTT
T ss_pred ceEEEEeCCCeEEEEECCCCcEEEEEc-CCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCC
Confidence 579999999999999999988766654 4566899999999999999999999999999643
No 43
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=2e-34 Score=227.06 Aligned_cols=207 Identities=22% Similarity=0.424 Sum_probs=181.7
Q ss_pred eecccccceEEEEECC-CCCEEEEEeCCCcEEEeecCCC-------cEEEEEecccccEEEEEECCCC-CEEEEecCCCc
Q psy4391 22 TLAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDG-------KFEKTISGHKLGISDVAWSSDS-RLLVSGSDDKT 92 (231)
Q Consensus 22 ~~~~h~~~i~~~~~~~-~~~~l~~~~~dg~i~i~~~~~~-------~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~~g~ 92 (231)
.+.+|.+.|.+++|+| ++++|++|+.||.|++|+..++ .....+.+|...|.+++|+|++ .++++++.|+.
T Consensus 76 ~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~ 155 (402)
T 2aq5_A 76 LVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNV 155 (402)
T ss_dssp CBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSC
T ss_pred eEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCE
Confidence 3568999999999999 8999999999999999999876 4567788899999999999998 68999999999
Q ss_pred EEEEeCCCceeeeee--cCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeec-cCCCCC-eEEEEEcCCCCeE
Q psy4391 93 LKIWELSSGKCLKTL--KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTL-PAHSDP-VSAVHFNRDGSLI 168 (231)
Q Consensus 93 i~~~d~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~-~~~~~~-v~~~~~~~~~~~l 168 (231)
|++||+.+++....+ ..|...+.+++|+|++++|++++.|+.|++||+++++.+..+ ..|.+. +.++.|+|++.++
T Consensus 156 i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 235 (402)
T 2aq5_A 156 ILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKIL 235 (402)
T ss_dssp EEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEE
T ss_pred EEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEE
Confidence 999999999988888 788899999999999999999999999999999999988887 677665 8899999999999
Q ss_pred EEE---ecCCeEEEEeCCCCce-eeeeecCCCCCeEEEEECCCCCEEEE-EeCCCeEEEEeCCCC
Q psy4391 169 VSS---SYDGLCRIWDTASGQC-LKTLIDDDNPPVSFVKFSPNGKYILA-ATLDNTLKLWDSYPC 228 (231)
Q Consensus 169 ~~~---~~dg~i~v~d~~~~~~-~~~~~~~~~~~i~~~~~s~~g~~l~~-~s~d~~v~vwd~~~~ 228 (231)
++| +.|+.|++||+++++. .......+...+..++|+|++++|++ ++.||.|++||....
T Consensus 236 ~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~ 300 (402)
T 2aq5_A 236 TTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSE 300 (402)
T ss_dssp EEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSS
T ss_pred EEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCC
Confidence 999 7899999999988664 33333345567889999999999975 557999999997543
No 44
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.2e-34 Score=225.19 Aligned_cols=203 Identities=18% Similarity=0.263 Sum_probs=169.0
Q ss_pred ecccccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEE----EEecccccEEEEEECCCCCEEEEecCCCcEEEEeC
Q psy4391 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK----TISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWEL 98 (231)
Q Consensus 23 ~~~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~----~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~ 98 (231)
..+|...|.+++|+|+++++ +++.||.|++||+.+++... ...+|...|.+++|+|++++|++++.|+.|++||+
T Consensus 90 ~~~~~~~V~~~~~s~d~~~l-~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~ 168 (357)
T 4g56_B 90 GVQTEAGVTDVAWVSEKGIL-VASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDL 168 (357)
T ss_dssp EEECSSCEEEEEEETTTEEE-EEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEET
T ss_pred cCCCCCCEEEEEEcCCCCEE-EEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEEC
Confidence 34688899999999998755 56789999999997765432 33467889999999999999999999999999999
Q ss_pred CCceeeeeecCCCcceEEEEECCCCC-EEEEeecCCcEEEEECCCCceeeec--cCCCCCeEEEEEcCCC-CeEEEEecC
Q psy4391 99 SSGKCLKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVRTGKCLKTL--PAHSDPVSAVHFNRDG-SLIVSSSYD 174 (231)
Q Consensus 99 ~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~--~~~~~~v~~~~~~~~~-~~l~~~~~d 174 (231)
.+++.+..+..|...+.+++|+|++. ++++++.|+.|++||+++++....+ ..+...+.+++|+|++ .+|++|+.|
T Consensus 169 ~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d 248 (357)
T 4g56_B 169 SQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDET 248 (357)
T ss_dssp TTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESS
T ss_pred CCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecc
Confidence 99999999999999999999999874 7899999999999999988876554 3456789999999975 578899999
Q ss_pred CeEEEEeCCCCceeeeeecCCCCCeEEEEECCCC-CEEEEEeCCCeEEEEeCCC
Q psy4391 175 GLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG-KYILAATLDNTLKLWDSYP 227 (231)
Q Consensus 175 g~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g-~~l~~~s~d~~v~vwd~~~ 227 (231)
+.|++||+++++.+..+. .+...|..++|+|++ ++|++++.|+.|+|||...
T Consensus 249 ~~i~~wd~~~~~~~~~~~-~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~ 301 (357)
T 4g56_B 249 GNVSLVNIKNPDSAQTSA-VHSQNITGLAYSYHSSPFLASISEDCTVAVLDADF 301 (357)
T ss_dssp SCEEEEESSCGGGCEEEC-CCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTS
T ss_pred cceeEEECCCCcEeEEEe-ccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCC
Confidence 999999999988777664 445679999999997 5789999999999999743
No 45
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=3.2e-33 Score=214.77 Aligned_cols=212 Identities=30% Similarity=0.493 Sum_probs=184.3
Q ss_pred ccceeEEeecccccceEEEEECCC-CCEEEEEeCCCcEEEeecCCCc-----EEEEEecccccEEEEEECCCCCEEEEec
Q psy4391 15 PNYVLKFTLAGHTKAVSSVKFSPN-GEWLASSSADKLIKIWGAYDGK-----FEKTISGHKLGISDVAWSSDSRLLVSGS 88 (231)
Q Consensus 15 ~~~~~~~~~~~h~~~i~~~~~~~~-~~~l~~~~~dg~i~i~~~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 88 (231)
.+..++.+|+||.+.|++++|+|+ +++|++|+.||.|++|++.... ....+.+|...|.+++|+|+++++++++
T Consensus 26 ~~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~ 105 (340)
T 4aow_A 26 EQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGS 105 (340)
T ss_dssp CEEEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred CceEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEc
Confidence 345677789999999999999997 6899999999999999986543 4556788899999999999999999999
Q ss_pred CCCcEEEEeCCCceeeeeecCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCce-eeeccCCCCCeEEEEEcCCC--
Q psy4391 89 DDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC-LKTLPAHSDPVSAVHFNRDG-- 165 (231)
Q Consensus 89 ~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~-~~~~~~~~~~v~~~~~~~~~-- 165 (231)
.|+.|++|+............+...+....+++++..+++++.|+.+++||+..... ......|...+..++|++++
T Consensus 106 ~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 185 (340)
T 4aow_A 106 WDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN 185 (340)
T ss_dssp TTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSS
T ss_pred ccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCC
Confidence 999999999999888777777778888899999999999999999999999986654 33456778899999998865
Q ss_pred CeEEEEecCCeEEEEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCC
Q psy4391 166 SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSYP 227 (231)
Q Consensus 166 ~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~~~ 227 (231)
.++++++.|+.|++||+.+++.+..+. .+..+|.+++|+|+|++|++++.||.|++||...
T Consensus 186 ~~~~s~~~d~~i~i~d~~~~~~~~~~~-~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~ 246 (340)
T 4aow_A 186 PIIVSCGWDKLVKVWNLANCKLKTNHI-GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNE 246 (340)
T ss_dssp CEEEEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEECTTSSEEEEEETTCEEEEEETTT
T ss_pred cEEEEEcCCCEEEEEECCCCceeeEec-CCCCcEEEEEECCCCCEEEEEeCCCeEEEEEecc
Confidence 467899999999999999998776654 4556899999999999999999999999999744
No 46
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.9e-34 Score=227.97 Aligned_cols=205 Identities=24% Similarity=0.444 Sum_probs=178.4
Q ss_pred EEeecccccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEecCCCcEEEEeCC
Q psy4391 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELS 99 (231)
Q Consensus 20 ~~~~~~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~ 99 (231)
...+.+|...|.+++|+|++++|++++.||.|++||..+++....+.+|...|.+++|+|++++|++++.|+.|++||+.
T Consensus 132 ~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~ 211 (420)
T 3vl1_A 132 REIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECG 211 (420)
T ss_dssp EEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETT
T ss_pred eeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECC
Confidence 34556899999999999999999999999999999999988888899999999999999999999999999999999999
Q ss_pred CceeeeeecCC---Ccce---------------------EEEEECCCCCEEEEeecCCcEEEEECCCCceeeecc-CCCC
Q psy4391 100 SGKCLKTLKGH---SNYV---------------------FCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLP-AHSD 154 (231)
Q Consensus 100 ~~~~~~~~~~~---~~~v---------------------~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~ 154 (231)
+++....+..+ ...+ .+++|+|+++++++++.||.|++||+++++.+..+. .|..
T Consensus 212 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 291 (420)
T 3vl1_A 212 TGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTC 291 (420)
T ss_dssp TTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSS
T ss_pred CCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCC
Confidence 99888777642 2333 344568899999999999999999999988766654 4778
Q ss_pred CeEEEEEcCCCC-eEEEEecCCeEEEEeCCCCce-eeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeC
Q psy4391 155 PVSAVHFNRDGS-LIVSSSYDGLCRIWDTASGQC-LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225 (231)
Q Consensus 155 ~v~~~~~~~~~~-~l~~~~~dg~i~v~d~~~~~~-~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~ 225 (231)
.+.+++|+|++. ++++++.||.|++||+++++. +..+..++..++..+.+ +++++|++++.|+.|++||.
T Consensus 292 ~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~ 363 (420)
T 3vl1_A 292 SCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYF-AAGALFVSSGFDTSIKLDII 363 (420)
T ss_dssp CEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEE-ETTEEEEEETTTEEEEEEEE
T ss_pred CceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEe-CCCCEEEEecCCccEEEEec
Confidence 999999999999 999999999999999998754 56666656778888855 57889999999999999995
No 47
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.6e-34 Score=228.44 Aligned_cols=198 Identities=20% Similarity=0.291 Sum_probs=177.3
Q ss_pred ceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEecCCCcEEEEeCCCceeeeeec
Q psy4391 29 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLK 108 (231)
Q Consensus 29 ~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~ 108 (231)
.+....|++++++|++++.||.|++|+..++.....+.+|...|.+++|+|++++|++++.|+.|++||+.+++....+.
T Consensus 99 ~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~ 178 (420)
T 3vl1_A 99 YTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLI 178 (420)
T ss_dssp EEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEE
T ss_pred ceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEc
Confidence 44555789999999999999999999999888877778899999999999999999999999999999999999888899
Q ss_pred CCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeeccC---CCCCeEE---------------------EEEcCC
Q psy4391 109 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPA---HSDPVSA---------------------VHFNRD 164 (231)
Q Consensus 109 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~---~~~~v~~---------------------~~~~~~ 164 (231)
.|...+.+++|+|+++++++++.|+.|++||+++++.+..+.. +...+.+ ++|+|+
T Consensus 179 ~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 258 (420)
T 3vl1_A 179 GHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTY 258 (420)
T ss_dssp CCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCT
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCC
Confidence 9999999999999999999999999999999999988777654 3334444 445789
Q ss_pred CCeEEEEecCCeEEEEeCCCCceeeeeecCCCCCeEEEEECCCCC-EEEEEeCCCeEEEEeCC
Q psy4391 165 GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK-YILAATLDNTLKLWDSY 226 (231)
Q Consensus 165 ~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~-~l~~~s~d~~v~vwd~~ 226 (231)
++++++++.||.|++||+++++....+...+...+..++|+|+++ +|++++.||.|++||..
T Consensus 259 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~ 321 (420)
T 3vl1_A 259 GKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLR 321 (420)
T ss_dssp TEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETT
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcC
Confidence 999999999999999999999888777666777899999999999 99999999999999974
No 48
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=5.9e-33 Score=212.85 Aligned_cols=203 Identities=23% Similarity=0.380 Sum_probs=183.5
Q ss_pred eEEeecccccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEecCCCcEEEEeC
Q psy4391 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWEL 98 (231)
Q Consensus 19 ~~~~~~~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~ 98 (231)
....+..|...|.+++|+|+++++++++.||.|++|+..+++....+..|...+.+++|+|+++.+++++.++.|++||+
T Consensus 133 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~ 212 (337)
T 1gxr_A 133 IKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDL 212 (337)
T ss_dssp EEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred eeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEEC
Confidence 34556688899999999999999999999999999999999888888888899999999999999999999999999999
Q ss_pred CCceeeeeecCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeEEEEecCCeEE
Q psy4391 99 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCR 178 (231)
Q Consensus 99 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 178 (231)
++++....+. +...+.+++|+|+++++++++.++.|++||+++++. ..+..|...+.+++|+|+++++++++.||.++
T Consensus 213 ~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 290 (337)
T 1gxr_A 213 REGRQLQQHD-FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDK-YQLHLHESCVLSLKFAYCGKWFVSTGKDNLLN 290 (337)
T ss_dssp TTTEEEEEEE-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCE-EEECCCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred CCCceEeeec-CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCe-EEEcCCccceeEEEECCCCCEEEEecCCCcEE
Confidence 9988777765 567799999999999999999999999999998765 45677889999999999999999999999999
Q ss_pred EEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeC
Q psy4391 179 IWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225 (231)
Q Consensus 179 v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~ 225 (231)
+||+.+++.+... .+...+..++|+|++++|++++.||.|++||.
T Consensus 291 ~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 291 AWRTPYGASIFQS--KESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp EEETTTCCEEEEE--ECSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred EEECCCCeEEEEe--cCCCcEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence 9999998876443 34567899999999999999999999999985
No 49
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=4.7e-34 Score=242.65 Aligned_cols=209 Identities=22% Similarity=0.434 Sum_probs=193.4
Q ss_pred eeEEeecccccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEecCCCcEEEEe
Q psy4391 18 VLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWE 97 (231)
Q Consensus 18 ~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d 97 (231)
.++..+.+|...|.+++|+|++++|++++.||.|++|+..++.....+.+|...|.+++|+|++++|++++.||.|++||
T Consensus 4 ~~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~ 83 (814)
T 3mkq_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFN 83 (814)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEE
T ss_pred ccceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEE
Confidence 35566789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceeeeeecCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCC-ceeeeccCCCCCeEEEEEcC-CCCeEEEEecCC
Q psy4391 98 LSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG-KCLKTLPAHSDPVSAVHFNR-DGSLIVSSSYDG 175 (231)
Q Consensus 98 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~-~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg 175 (231)
+.+++....+..|...+.+++|+|++..+++++.|+.|++||++++ .....+..|..++.+++|+| ++..+++++.||
T Consensus 84 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg 163 (814)
T 3mkq_A 84 YNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDR 163 (814)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTS
T ss_pred CCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCC
Confidence 9999999999999999999999999999999999999999999987 56677788999999999999 889999999999
Q ss_pred eEEEEeCCCCceeeeeecCCCCCeEEEEECC--CCCEEEEEeCCCeEEEEeCC
Q psy4391 176 LCRIWDTASGQCLKTLIDDDNPPVSFVKFSP--NGKYILAATLDNTLKLWDSY 226 (231)
Q Consensus 176 ~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~--~g~~l~~~s~d~~v~vwd~~ 226 (231)
.|++||+.+++....+.......+..++|+| ++++|++++.||.|++||..
T Consensus 164 ~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~ 216 (814)
T 3mkq_A 164 TVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQ 216 (814)
T ss_dssp EEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETT
T ss_pred eEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECC
Confidence 9999999988877777666667788999999 99999999999999999964
No 50
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.3e-32 Score=210.92 Aligned_cols=202 Identities=18% Similarity=0.359 Sum_probs=181.5
Q ss_pred ecccccceEEEEECCCCCEEEEEeCCCcEEEeecCCCc--EEEEEecccccEEEEEECCCCCEEEEecCCCcEEEEeCCC
Q psy4391 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK--FEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSS 100 (231)
Q Consensus 23 ~~~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~~ 100 (231)
..+|...|.+++|+|++++|++++.||.|++|+..+++ ....+..+...+.+++|+|+++++++++.++.|++||+++
T Consensus 93 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~ 172 (337)
T 1gxr_A 93 CLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN 172 (337)
T ss_dssp CSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred ccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCC
Confidence 33788999999999999999999999999999998776 4556677888899999999999999999999999999999
Q ss_pred ceeeeeecCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeEEEEecCCeEEEE
Q psy4391 101 GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 180 (231)
Q Consensus 101 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~ 180 (231)
++....+..|...+.+++|+|+++.+++++.|+.|++||+++++.+..+. +...+.+++|+|+++++++++.++.+++|
T Consensus 173 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~~i~~~ 251 (337)
T 1gxr_A 173 QTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAVGMESSNVEVL 251 (337)
T ss_dssp TEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred CceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec-CCCceEEEEECCCCCEEEEEcCCCcEEEE
Confidence 99988998899999999999999999999999999999999998777664 57789999999999999999999999999
Q ss_pred eCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCC
Q psy4391 181 DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSYP 227 (231)
Q Consensus 181 d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~~~ 227 (231)
|+.+++... ...+...+..++|+|++++|++++.||.|++||...
T Consensus 252 ~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~ 296 (337)
T 1gxr_A 252 HVNKPDKYQ--LHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPY 296 (337)
T ss_dssp ETTSSCEEE--ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred ECCCCCeEE--EcCCccceeEEEECCCCCEEEEecCCCcEEEEECCC
Confidence 999887542 334566799999999999999999999999999754
No 51
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=2.8e-33 Score=234.55 Aligned_cols=205 Identities=34% Similarity=0.587 Sum_probs=182.2
Q ss_pred eEEeecccccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEecCCCcEEEEeC
Q psy4391 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWEL 98 (231)
Q Consensus 19 ~~~~~~~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~ 98 (231)
....+.+|...|.+++|+|++++|++|+.||.|++||..++.....+.+|...|.+++|+|++++|++++.|+.|++||.
T Consensus 422 ~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~ 501 (694)
T 3dm0_A 422 AQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNT 501 (694)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECT
T ss_pred ccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEC
Confidence 34567799999999999999999999999999999999999988999999999999999999999999999999999998
Q ss_pred CCceeeeee---cCCCcceEEEEECCCC--CEEEEeecCCcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeEEEEec
Q psy4391 99 SSGKCLKTL---KGHSNYVFCCNFNPQS--NLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY 173 (231)
Q Consensus 99 ~~~~~~~~~---~~~~~~v~~~~~~~~~--~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 173 (231)
......... .+|...+.+++|+|++ ..+++++.|+.|++||+++++....+..|.+.|.+++|+|++++|++++.
T Consensus 502 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~ 581 (694)
T 3dm0_A 502 LGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGK 581 (694)
T ss_dssp TSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred CCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeC
Confidence 765433222 3577889999999986 58999999999999999999988899999999999999999999999999
Q ss_pred CCeEEEEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCC
Q psy4391 174 DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSY 226 (231)
Q Consensus 174 dg~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~~ 226 (231)
||.|++||+.+++.+..+. ....+..++|+|++.+|++++ ++.|++||..
T Consensus 582 Dg~i~iwd~~~~~~~~~~~--~~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~ 631 (694)
T 3dm0_A 582 DGVVLLWDLAEGKKLYSLE--ANSVIHALCFSPNRYWLCAAT-EHGIKIWDLE 631 (694)
T ss_dssp TSBCEEEETTTTEEEECCB--CSSCEEEEEECSSSSEEEEEE-TTEEEEEETT
T ss_pred CCeEEEEECCCCceEEEec--CCCcEEEEEEcCCCcEEEEEc-CCCEEEEECC
Confidence 9999999999998776653 345789999999998887766 6779999964
No 52
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-33 Score=218.99 Aligned_cols=209 Identities=28% Similarity=0.398 Sum_probs=179.1
Q ss_pred eeEEeecccccceEEEEECCC--CCEEEEEeCCCcEEEeecCCCc--EEEEEecccccEEEEEECCC--CCEEEEecCCC
Q psy4391 18 VLKFTLAGHTKAVSSVKFSPN--GEWLASSSADKLIKIWGAYDGK--FEKTISGHKLGISDVAWSSD--SRLLVSGSDDK 91 (231)
Q Consensus 18 ~~~~~~~~h~~~i~~~~~~~~--~~~l~~~~~dg~i~i~~~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~~g 91 (231)
.....+.+|...|.+++|+++ +++|++++.||.|++|+..+++ ....+..|...+.+++|+|+ ++++++++.|+
T Consensus 46 ~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~ 125 (379)
T 3jrp_A 46 KLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDG 125 (379)
T ss_dssp EEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS
T ss_pred eeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCC
Confidence 344567789999999999987 8999999999999999998876 56667778889999999999 99999999999
Q ss_pred cEEEEeCCCce--eeeeecCCCcceEEEEECC-------------CCCEEEEeecCCcEEEEECCCCc----eeeeccCC
Q psy4391 92 TLKIWELSSGK--CLKTLKGHSNYVFCCNFNP-------------QSNLIVSGSFDESVRIWDVRTGK----CLKTLPAH 152 (231)
Q Consensus 92 ~i~~~d~~~~~--~~~~~~~~~~~v~~~~~~~-------------~~~~l~~~~~d~~i~v~d~~~~~----~~~~~~~~ 152 (231)
.|++||+.+.. ....+..|...+.+++|+| ++.++++++.|+.|++||++++. ....+..|
T Consensus 126 ~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h 205 (379)
T 3jrp_A 126 KVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGH 205 (379)
T ss_dssp EEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCC
T ss_pred cEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecc
Confidence 99999998763 3345667888999999999 69999999999999999998765 34566788
Q ss_pred CCCeEEEEEcCC---CCeEEEEecCCeEEEEeCCCCcee--eeee--cCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeC
Q psy4391 153 SDPVSAVHFNRD---GSLIVSSSYDGLCRIWDTASGQCL--KTLI--DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225 (231)
Q Consensus 153 ~~~v~~~~~~~~---~~~l~~~~~dg~i~v~d~~~~~~~--~~~~--~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~ 225 (231)
...|.+++|+|+ +.+|++++.||.|++||+.+++.. .... ..+...+..++|+|+|++|++++.||.|++||.
T Consensus 206 ~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~ 285 (379)
T 3jrp_A 206 SDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKE 285 (379)
T ss_dssp SSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEE
T ss_pred cCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeC
Confidence 999999999999 899999999999999999876421 1111 225567899999999999999999999999996
Q ss_pred C
Q psy4391 226 Y 226 (231)
Q Consensus 226 ~ 226 (231)
.
T Consensus 286 ~ 286 (379)
T 3jrp_A 286 N 286 (379)
T ss_dssp E
T ss_pred C
Confidence 4
No 53
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=2.1e-33 Score=218.27 Aligned_cols=202 Identities=18% Similarity=0.240 Sum_probs=176.4
Q ss_pred ccccceEEEEECCCCCEEEEEeCCCcEEEeecCCCc--EEEEEecccccEEEEEECCCCCEEEEecCCCcEEEEeCCCce
Q psy4391 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK--FEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGK 102 (231)
Q Consensus 25 ~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~ 102 (231)
.|...|.+++|+|++++|++++.|+.|++|+..+++ ....+.+|...|.+++|+|+++++++++.|+.|++||+++++
T Consensus 6 ~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 85 (372)
T 1k8k_C 6 FLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRT 85 (372)
T ss_dssp SCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTE
T ss_pred ccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCe
Confidence 488999999999999999999999999999998876 777888899999999999999999999999999999998876
Q ss_pred eeee--ecCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCce----eeeccCCCCCeEEEEEcCCCCeEEEEecCCe
Q psy4391 103 CLKT--LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC----LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGL 176 (231)
Q Consensus 103 ~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 176 (231)
.... +..+...+.+++|+|+++++++++.|+.|++||++.+.. ......|...+.+++|+|+++++++++.||.
T Consensus 86 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~ 165 (372)
T 1k8k_C 86 WKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFK 165 (372)
T ss_dssp EEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSC
T ss_pred eeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCC
Confidence 4433 356778899999999999999999999999999988762 2333567889999999999999999999999
Q ss_pred EEEEeCC------------------CCceeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCC
Q psy4391 177 CRIWDTA------------------SGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSYP 227 (231)
Q Consensus 177 i~v~d~~------------------~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~~~ 227 (231)
+++||+. .++.+..+. .+...+..++|+|++++|++++.||.|++||...
T Consensus 166 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 233 (372)
T 1k8k_C 166 CRIFSAYIKEVEERPAPTPWGSKMPFGELMFESS-SSCGWVHGVCFSANGSRVAWVSHDSTVCLADADK 233 (372)
T ss_dssp EEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECC-CCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGG
T ss_pred EEEEEcccccccccccccccccccchhhheEecC-CCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCC
Confidence 9999964 455555443 4556799999999999999999999999999743
No 54
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-34 Score=233.84 Aligned_cols=205 Identities=14% Similarity=0.120 Sum_probs=173.6
Q ss_pred EeecccccceEEEEECCC------CCEEEEEeCCCcEEEeecCCCcE-----------EEEEecccccEEEEEECCCCCE
Q psy4391 21 FTLAGHTKAVSSVKFSPN------GEWLASSSADKLIKIWGAYDGKF-----------EKTISGHKLGISDVAWSSDSRL 83 (231)
Q Consensus 21 ~~~~~h~~~i~~~~~~~~------~~~l~~~~~dg~i~i~~~~~~~~-----------~~~~~~~~~~v~~~~~~~~~~~ 83 (231)
.++.+|.+.|.+++|+|+ +.+||+++.||.|++|++.++.. ...+.+|...|.+++|++++ .
T Consensus 201 ~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~ 279 (524)
T 2j04_B 201 QTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-T 279 (524)
T ss_dssp EEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-E
T ss_pred EEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-e
Confidence 345677889999999997 57999999999999999876531 13566788899999999864 7
Q ss_pred EEEecCCCcEEEEeCCCce-eeeeecCCCcceEEE--EECCCC-CEEEEeecCCcEEEEECCCCceeeeccCCC--CCeE
Q psy4391 84 LVSGSDDKTLKIWELSSGK-CLKTLKGHSNYVFCC--NFNPQS-NLIVSGSFDESVRIWDVRTGKCLKTLPAHS--DPVS 157 (231)
Q Consensus 84 l~~~~~~g~i~~~d~~~~~-~~~~~~~~~~~v~~~--~~~~~~-~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~--~~v~ 157 (231)
|++|+.||.|++||++++. +...+..|...|.++ .++|++ .+|++++.|++|++||+++++.+..+..|. ..+.
T Consensus 280 lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~ 359 (524)
T 2j04_B 280 VVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLV 359 (524)
T ss_dssp EEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCC
T ss_pred EEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCccc
Confidence 9999999999999998763 445678899999998 578887 899999999999999999887766555543 2478
Q ss_pred EEEEcCCCCeEEEEecCCeEEEEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCC
Q psy4391 158 AVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSYP 227 (231)
Q Consensus 158 ~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~~~ 227 (231)
+++|+|+++.+++++.|+.|++||++++..+..+.. +...|.+++|+|+|++|++|+.||.|++||...
T Consensus 360 ~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~g-H~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 360 PVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVS-RETTITAIGVSRLHPMVLAGSADGSLIITNAAR 428 (524)
T ss_dssp CEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEE-CSSCEEEEECCSSCCBCEEEETTTEEECCBSCS
T ss_pred ceEeCCCcCeEEEeCCCCcEEEEECcccccceeeec-CCCceEEEEeCCCCCeEEEEECCCEEEEEechH
Confidence 899999999999999999999999999887666654 567899999999999999999999999999643
No 55
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=2.4e-34 Score=222.89 Aligned_cols=206 Identities=22% Similarity=0.390 Sum_probs=177.3
Q ss_pred eEEeecccccceEEEEECC-CCCEEEEEeCCCcEEEeecCCCcEEEEE---ecccccEEEEEECCCCCEEEEecCCCcEE
Q psy4391 19 LKFTLAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTI---SGHKLGISDVAWSSDSRLLVSGSDDKTLK 94 (231)
Q Consensus 19 ~~~~~~~h~~~i~~~~~~~-~~~~l~~~~~dg~i~i~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~~g~i~ 94 (231)
....+.+|...|.+++|+| ++++|++++.||.|++||..+++....+ ..|...+.+++|+|+++++++++.||.|+
T Consensus 107 ~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 186 (366)
T 3k26_A 107 CIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLK 186 (366)
T ss_dssp EEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred EeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEE
Confidence 3455678999999999999 8999999999999999999988888887 57888999999999999999999999999
Q ss_pred EEeCCCceeeeeec----------------------------CCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCce-
Q psy4391 95 IWELSSGKCLKTLK----------------------------GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC- 145 (231)
Q Consensus 95 ~~d~~~~~~~~~~~----------------------------~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~- 145 (231)
+||+.+++....+. .|...+.+++|+ ++++++++.|+.|++||++++..
T Consensus 187 i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~ 264 (366)
T 3k26_A 187 LWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDD 264 (366)
T ss_dssp EEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCC
T ss_pred EEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCcccc
Confidence 99998765443332 277889999998 77999999999999999987644
Q ss_pred -------------eeeccCCCCCeEEEEEcCC--CCeEEEEecCCeEEEEeCCCCceee----eeecC-CCCCeEEEEEC
Q psy4391 146 -------------LKTLPAHSDPVSAVHFNRD--GSLIVSSSYDGLCRIWDTASGQCLK----TLIDD-DNPPVSFVKFS 205 (231)
Q Consensus 146 -------------~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~v~d~~~~~~~~----~~~~~-~~~~i~~~~~s 205 (231)
+..+..|...+.+++|+|+ +++|++++.||.|++||+.+++... .+..+ +...|..++|+
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 344 (366)
T 3k26_A 265 IDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFS 344 (366)
T ss_dssp GGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEEC
T ss_pred ccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeC
Confidence 5666778888999999999 9999999999999999999876432 33322 25789999999
Q ss_pred CCCCEEEEEeCCCeEEEEeCC
Q psy4391 206 PNGKYILAATLDNTLKLWDSY 226 (231)
Q Consensus 206 ~~g~~l~~~s~d~~v~vwd~~ 226 (231)
|++++|++++.||.|++||..
T Consensus 345 ~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 345 RDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp TTSSEEEEEETTSEEEEEEC-
T ss_pred CCCCeEEEEeCCCEEEEEEec
Confidence 999999999999999999964
No 56
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=6.2e-33 Score=227.56 Aligned_cols=200 Identities=42% Similarity=0.730 Sum_probs=180.3
Q ss_pred EeecccccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEecCCCcEEEEeCCC
Q psy4391 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSS 100 (231)
Q Consensus 21 ~~~~~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~~ 100 (231)
..+.+|...|.+++|+|++++|++++.||.+++|+. +++....+.+|...|.+++|+|++++|++++.|+.|++||. +
T Consensus 338 ~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~ 415 (577)
T 2ymu_A 338 QTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-N 415 (577)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-T
T ss_pred EEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-C
Confidence 345678999999999999999999999999999996 56777888889999999999999999999999999999996 4
Q ss_pred ceeeeeecCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeEEEEecCCeEEEE
Q psy4391 101 GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 180 (231)
Q Consensus 101 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~ 180 (231)
++.+..+..|...+.+++|+|+++++++++.|+.|++||.. ++.+..+..|...|.+++|+|++++|++++.|+.|++|
T Consensus 416 ~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~-~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw 494 (577)
T 2ymu_A 416 GQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRN-GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLW 494 (577)
T ss_dssp CCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-SCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEE
T ss_pred CCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECC-CCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEE
Confidence 66777888899999999999999999999999999999974 66778888999999999999999999999999999999
Q ss_pred eCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeC
Q psy4391 181 DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225 (231)
Q Consensus 181 d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~ 225 (231)
|. +++.+..+. .+...|..++|+|+|++|++++.||.|++||.
T Consensus 495 ~~-~~~~~~~~~-~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~ 537 (577)
T 2ymu_A 495 NR-NGQLLQTLT-GHSSSVRGVAFSPDGQTIASASDDKTVKLWNR 537 (577)
T ss_dssp ET-TSCEEEEEE-CCSSCEEEEEECTTSSCEEEEETTSEEEEECT
T ss_pred cC-CCCEEEEEe-CCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC
Confidence 96 566666654 45567999999999999999999999999995
No 57
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.9e-34 Score=225.07 Aligned_cols=204 Identities=16% Similarity=0.219 Sum_probs=167.8
Q ss_pred eEEeecccccceEEEEECCCCCEEEEEeCCCcEEEeecCCCc---EEEEEecccccEEEEEECCCCCEEEEecCCCcEEE
Q psy4391 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK---FEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKI 95 (231)
Q Consensus 19 ~~~~~~~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~ 95 (231)
...++.+|...|.+++|+|++++|++++.||.|++|+..++. ....+..|...+.+++|+|++++|++++.|+.|++
T Consensus 47 ~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i 126 (377)
T 3dwl_C 47 HARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISV 126 (377)
T ss_dssp ECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEE
T ss_pred EEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEE
Confidence 445567899999999999999999999999999999998766 56667788899999999999999999999999999
Q ss_pred EeCCCce---eeeeecC-CCcceEEEEECCCCCEEEEeecCCcEEEEECC------------------CCceeeeccCCC
Q psy4391 96 WELSSGK---CLKTLKG-HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR------------------TGKCLKTLPAHS 153 (231)
Q Consensus 96 ~d~~~~~---~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~------------------~~~~~~~~~~~~ 153 (231)
||+++++ ....+.. |...+.+++|+|+++++++++.|+.|++||++ .++.+..+ .|.
T Consensus 127 wd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 205 (377)
T 3dwl_C 127 CYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSG 205 (377)
T ss_dssp CCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCS
T ss_pred EEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCC
Confidence 9999876 3566776 88999999999999999999999999999985 24455556 888
Q ss_pred CCeEEEEEcCCCCeEEEEecCCeEEEEeCCCCce----eeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeC
Q psy4391 154 DPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC----LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225 (231)
Q Consensus 154 ~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~----~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~ 225 (231)
..|.+++|+|++++|++++.||.|++||+.+++. +..+. .+..++..++|+|+|++|++++.++.+ +|+.
T Consensus 206 ~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~ 279 (377)
T 3dwl_C 206 GWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVK-LSQLPLRSLLWANESAIVAAGYNYSPI-LLQG 279 (377)
T ss_dssp SSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEE-CSSSCEEEEEEEETTEEEEEESSSSEE-EECC
T ss_pred ceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeec-CCCCceEEEEEcCCCCEEEEEcCCcEE-EEEe
Confidence 9999999999999999999999999999998876 44443 455679999999999999998866655 6664
No 58
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=8.6e-33 Score=214.88 Aligned_cols=207 Identities=19% Similarity=0.282 Sum_probs=180.3
Q ss_pred eEEeecccccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEE--ecccccEEEEEECCCCCEEEEecCCCcEEEE
Q psy4391 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI--SGHKLGISDVAWSSDSRLLVSGSDDKTLKIW 96 (231)
Q Consensus 19 ~~~~~~~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~ 96 (231)
....+.+|...|.+++|+|++++|++++.||.|++|+..+++..... ..+...+.+++|+|+++++++++.++.|++|
T Consensus 44 ~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~ 123 (372)
T 1k8k_C 44 QVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISIC 123 (372)
T ss_dssp EEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEE
T ss_pred eeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEE
Confidence 44566789999999999999999999999999999999877654443 5677889999999999999999999999999
Q ss_pred eCCCcee----eeeecCCCcceEEEEECCCCCEEEEeecCCcEEEEECC------------------CCceeeeccCCCC
Q psy4391 97 ELSSGKC----LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR------------------TGKCLKTLPAHSD 154 (231)
Q Consensus 97 d~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~------------------~~~~~~~~~~~~~ 154 (231)
|+..++. ......|...+.+++|+|+++++++++.|+.|++||++ .++.+..+..|..
T Consensus 124 d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (372)
T 1k8k_C 124 YFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCG 203 (372)
T ss_dssp EEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSS
T ss_pred EecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCC
Confidence 9987652 22335677889999999999999999999999999953 5677788888999
Q ss_pred CeEEEEEcCCCCeEEEEecCCeEEEEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCC
Q psy4391 155 PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSYP 227 (231)
Q Consensus 155 ~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~~~ 227 (231)
.+.+++|+|++++|++++.||.|++||+.+++.+..+.. +..++..++|+|++++|+++ .|+.|++||...
T Consensus 204 ~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 204 WVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLAS-ETLPLLAVTFITESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp CEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEEC-SSCCEEEEEEEETTEEEEEE-TTSSCEEEEEET
T ss_pred eEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEcc-CCCCeEEEEEecCCCEEEEE-eCCeEEEEEccC
Confidence 999999999999999999999999999999988777654 45678999999999988888 899999999754
No 59
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-32 Score=217.64 Aligned_cols=206 Identities=22% Similarity=0.348 Sum_probs=182.8
Q ss_pred eEEeecccccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEE----------------------------------
Q psy4391 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT---------------------------------- 64 (231)
Q Consensus 19 ~~~~~~~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~---------------------------------- 64 (231)
....+.+|...|.+++|+|++++|++++.||.|++|+..+++....
T Consensus 141 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (425)
T 1r5m_A 141 LLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKF 220 (425)
T ss_dssp EEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEE
T ss_pred eeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEE
Confidence 3345668999999999999999999999999999999876654332
Q ss_pred ----------------------EecccccEEEEEECCCCCEEEEecCCCcEEEEeCCCceeeeeecCCCcceEEEEECCC
Q psy4391 65 ----------------------ISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQ 122 (231)
Q Consensus 65 ----------------------~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~ 122 (231)
+..|...+.+++|+|+++++++++.++.|++||+.+++....+..|...+.++.|+|+
T Consensus 221 ~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~ 300 (425)
T 1r5m_A 221 VIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGD 300 (425)
T ss_dssp EEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETT
T ss_pred EEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCC
Confidence 2245567899999999999999999999999999998888888888899999999999
Q ss_pred CCEEEEeecCCcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeEEEEecCCeEEEEeCCCCc----------------
Q psy4391 123 SNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ---------------- 186 (231)
Q Consensus 123 ~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~---------------- 186 (231)
+ .+++++.|+.|++||+++++.+..+..|...+.+++|+|++++|++++.||.|++||+.+++
T Consensus 301 ~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~ 379 (425)
T 1r5m_A 301 D-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNP 379 (425)
T ss_dssp T-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------C
T ss_pred C-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCc
Confidence 9 99999999999999999999998888899999999999999999999999999999998877
Q ss_pred ----eeeeeecCCCC-CeEEEEECCCCCEEEEEeCCCeEEEEeC
Q psy4391 187 ----CLKTLIDDDNP-PVSFVKFSPNGKYILAATLDNTLKLWDS 225 (231)
Q Consensus 187 ----~~~~~~~~~~~-~i~~~~~s~~g~~l~~~s~d~~v~vwd~ 225 (231)
.+..+..+... .+..++|+|++++|++++.||.|++||.
T Consensus 380 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 423 (425)
T 1r5m_A 380 LPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAI 423 (425)
T ss_dssp EECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEEC
T ss_pred ccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEee
Confidence 56665544333 8999999999999999999999999985
No 60
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=4.9e-33 Score=221.38 Aligned_cols=199 Identities=21% Similarity=0.419 Sum_probs=167.6
Q ss_pred cccceEEEEECCCCCEEEEEeCCCcEEEeecCCCc-----------EEEEEeccc------------ccEEEEEECCCC-
Q psy4391 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-----------FEKTISGHK------------LGISDVAWSSDS- 81 (231)
Q Consensus 26 h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~-----------~~~~~~~~~------------~~v~~~~~~~~~- 81 (231)
|.+.|++++|+|+|++|++|+.||.|++|+..++. ....+.+|. ..|.+++|+|++
T Consensus 27 ~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~ 106 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKN 106 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCS
T ss_pred ccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCC
Confidence 67899999999999999999999999999998765 466777887 779999999998
Q ss_pred -CEEEEecCCCcEEEEeCCCceee---------------------------------------ee-ecCCCcceEEEEEC
Q psy4391 82 -RLLVSGSDDKTLKIWELSSGKCL---------------------------------------KT-LKGHSNYVFCCNFN 120 (231)
Q Consensus 82 -~~l~~~~~~g~i~~~d~~~~~~~---------------------------------------~~-~~~~~~~v~~~~~~ 120 (231)
..+++++.|+.|++||+.+++.. +. ..+|...|.+++|+
T Consensus 107 ~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 186 (447)
T 3dw8_B 107 AAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISIN 186 (447)
T ss_dssp SSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEEC
T ss_pred cceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEc
Confidence 78999999999999998764431 12 35688889999999
Q ss_pred CCCCEEEEeecCCcEEEEECCC-Cceee-------eccCCCCCeEEEEEcCCC-CeEEEEecCCeEEEEeCCCCce----
Q psy4391 121 PQSNLIVSGSFDESVRIWDVRT-GKCLK-------TLPAHSDPVSAVHFNRDG-SLIVSSSYDGLCRIWDTASGQC---- 187 (231)
Q Consensus 121 ~~~~~l~~~~~d~~i~v~d~~~-~~~~~-------~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~v~d~~~~~~---- 187 (231)
|++++++++ .|+.|++||++. ++.+. .+..|...|.+++|+|++ .+|++++.||.|++||+++++.
T Consensus 187 ~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 265 (447)
T 3dw8_B 187 SDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRH 265 (447)
T ss_dssp TTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTT
T ss_pred CCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccce
Confidence 999999998 799999999984 43433 356788999999999998 9999999999999999998875
Q ss_pred eeeeecCCC-----------CCeEEEEECCCCCEEEEEeCCCeEEEEeCC
Q psy4391 188 LKTLIDDDN-----------PPVSFVKFSPNGKYILAATLDNTLKLWDSY 226 (231)
Q Consensus 188 ~~~~~~~~~-----------~~i~~~~~s~~g~~l~~~s~d~~v~vwd~~ 226 (231)
...+..+.. ..+..++|+|+|++|++++. +.|++||..
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~ 314 (447)
T 3dw8_B 266 SKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLN 314 (447)
T ss_dssp CEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETT
T ss_pred eeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCC
Confidence 444433332 27999999999999999998 999999974
No 61
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=5.7e-33 Score=217.85 Aligned_cols=207 Identities=22% Similarity=0.300 Sum_probs=180.5
Q ss_pred EEeeccc-----ccceEEEEEC----CCCCE-EEEEeCCCcEEEeecCC------CcEEE-----EE-------eccccc
Q psy4391 20 KFTLAGH-----TKAVSSVKFS----PNGEW-LASSSADKLIKIWGAYD------GKFEK-----TI-------SGHKLG 71 (231)
Q Consensus 20 ~~~~~~h-----~~~i~~~~~~----~~~~~-l~~~~~dg~i~i~~~~~------~~~~~-----~~-------~~~~~~ 71 (231)
...+..| ...|.+++|+ |++++ |++++.||.|++|+..+ +.... .+ ..+...
T Consensus 109 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (397)
T 1sq9_A 109 FEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQF 188 (397)
T ss_dssp EEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCC
T ss_pred ceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCC
Confidence 3455667 5899999999 99999 99999999999999877 44433 45 336778
Q ss_pred EEEEEECCCCCEEEEecCCCcEEEEeCCCceeeeeecC---C---CcceEEEEECCCCCEEEEeecC---CcEEEEECCC
Q psy4391 72 ISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKG---H---SNYVFCCNFNPQSNLIVSGSFD---ESVRIWDVRT 142 (231)
Q Consensus 72 v~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~---~---~~~v~~~~~~~~~~~l~~~~~d---~~i~v~d~~~ 142 (231)
+.+++|+|++ .+++++.++.|++||+.+++.+..+.. | ...+.+++|+|++++|++++.| +.|++||+++
T Consensus 189 i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~ 267 (397)
T 1sq9_A 189 ATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEF 267 (397)
T ss_dssp CCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTT
T ss_pred ceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCC
Confidence 9999999999 999999999999999999998888888 7 8899999999999999999999 9999999999
Q ss_pred CceeeeccC-------------CCCCeEEEEEcCCCCeEEEEecCCeEEEEeCCCCceeeeeec-----CC---------
Q psy4391 143 GKCLKTLPA-------------HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID-----DD--------- 195 (231)
Q Consensus 143 ~~~~~~~~~-------------~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~-----~~--------- 195 (231)
++.+..+.. |...|.+++|+|++++|++++.||.|++||+.+++.+..+.. .+
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 347 (397)
T 1sq9_A 268 GERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDE 347 (397)
T ss_dssp CCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCT
T ss_pred CcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhcccc
Confidence 998888887 899999999999999999999999999999999988877761 23
Q ss_pred ------CCCeEEEEECCCC----------CEEEEEeCCCeEEEEeCCC
Q psy4391 196 ------NPPVSFVKFSPNG----------KYILAATLDNTLKLWDSYP 227 (231)
Q Consensus 196 ------~~~i~~~~~s~~g----------~~l~~~s~d~~v~vwd~~~ 227 (231)
..+|..++|+|+| ++|++++.||.|++||...
T Consensus 348 ~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~ 395 (397)
T 1sq9_A 348 HGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAG 395 (397)
T ss_dssp TSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC
T ss_pred ccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCC
Confidence 6789999999998 7999999999999999643
No 62
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-33 Score=225.05 Aligned_cols=211 Identities=19% Similarity=0.329 Sum_probs=174.5
Q ss_pred ccceeEEee-cccccceEEEEECC-CCCEEEEEeCCCcEEEeecCC---Cc---EEEEEecccccEEEEEECCCCCEEEE
Q psy4391 15 PNYVLKFTL-AGHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAYD---GK---FEKTISGHKLGISDVAWSSDSRLLVS 86 (231)
Q Consensus 15 ~~~~~~~~~-~~h~~~i~~~~~~~-~~~~l~~~~~dg~i~i~~~~~---~~---~~~~~~~~~~~v~~~~~~~~~~~l~~ 86 (231)
+...+..++ .+|.+.|++++|+| ++++|++|+.||.|++|+..+ +. ....+ .|...|.+++|+|++++|++
T Consensus 50 ~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s 128 (437)
T 3gre_A 50 LRGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNFDAFAV 128 (437)
T ss_dssp CCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTSSEEEE
T ss_pred ccceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCCCEEEE
Confidence 334455666 78999999999999 999999999999999999865 32 12222 47889999999999999999
Q ss_pred ecCCCcEEEEeCC---CceeeeeecC------------CCcceEEEE--ECCCCCEEEEeecCCcEEEEECCCCceeeec
Q psy4391 87 GSDDKTLKIWELS---SGKCLKTLKG------------HSNYVFCCN--FNPQSNLIVSGSFDESVRIWDVRTGKCLKTL 149 (231)
Q Consensus 87 ~~~~g~i~~~d~~---~~~~~~~~~~------------~~~~v~~~~--~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~ 149 (231)
++.||.|++||+. +++....... +...+.++. +++++.++++++.|+.|++||+++++.+..+
T Consensus 129 ~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 208 (437)
T 3gre_A 129 SSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQII 208 (437)
T ss_dssp EETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred EeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEE
Confidence 9999999999995 3333322221 334455555 6688999999999999999999999998888
Q ss_pred cC--CCCCeEEEEEcCCCCeEEEEecCCeEEEEeCCCCceeeeeecCCCCCeEEEEEC----CCCCEEEEEeCCCeEEEE
Q psy4391 150 PA--HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS----PNGKYILAATLDNTLKLW 223 (231)
Q Consensus 150 ~~--~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s----~~g~~l~~~s~d~~v~vw 223 (231)
.. |.+.|.+++|+|++++|++++.||.|++||+++++.+..+...+..+|..++|+ |++++|++++.||.|++|
T Consensus 209 ~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iw 288 (437)
T 3gre_A 209 ENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIW 288 (437)
T ss_dssp ECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEE
T ss_pred ccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEE
Confidence 77 789999999999999999999999999999999988887754556688999554 578899999999999999
Q ss_pred eCC
Q psy4391 224 DSY 226 (231)
Q Consensus 224 d~~ 226 (231)
|..
T Consensus 289 d~~ 291 (437)
T 3gre_A 289 NFV 291 (437)
T ss_dssp ETT
T ss_pred EcC
Confidence 974
No 63
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.5e-33 Score=237.65 Aligned_cols=201 Identities=16% Similarity=0.222 Sum_probs=174.7
Q ss_pred eecccccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEecCCCcEEEEeCCCc
Q psy4391 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSG 101 (231)
Q Consensus 22 ~~~~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~~~ 101 (231)
...+|...|++++|+|++++||+|+.||.|++|+.........+ .|...|.+++|+| +++|++++.|+.|++||+.++
T Consensus 12 ~~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~-~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~ 89 (902)
T 2oaj_A 12 NKYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKL-EDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQ 89 (902)
T ss_dssp EEEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEEC-SSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTC
T ss_pred cccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEc-CCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCC
Confidence 34589999999999999999999999999999998766554443 4667899999999 889999999999999999998
Q ss_pred eeeeeecCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCcee-----------eeccCCCCCeEEEEEcCC-CCeEE
Q psy4391 102 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCL-----------KTLPAHSDPVSAVHFNRD-GSLIV 169 (231)
Q Consensus 102 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~-----------~~~~~~~~~v~~~~~~~~-~~~l~ 169 (231)
+.+..+. +...+.+++|+|+++++++|+.||.|++||+++++.. .....|.++|.+++|+|+ +..++
T Consensus 90 ~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~ 168 (902)
T 2oaj_A 90 KVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVL 168 (902)
T ss_dssp SEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEE
T ss_pred cEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEE
Confidence 8887776 5678999999999999999999999999999988753 234568889999999996 47899
Q ss_pred EEecCCeEEEEeCCCCceeeeeecC-----------------CCCCeEEEEECCCCCEEEEEeCCCeEEEEeCC
Q psy4391 170 SSSYDGLCRIWDTASGQCLKTLIDD-----------------DNPPVSFVKFSPNGKYILAATLDNTLKLWDSY 226 (231)
Q Consensus 170 ~~~~dg~i~v~d~~~~~~~~~~~~~-----------------~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~~ 226 (231)
+|+.||.| +||+++++.+..+..+ +...|.+++|+|+|++|++++.||.|++||..
T Consensus 169 ~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~ 241 (902)
T 2oaj_A 169 ISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDAN 241 (902)
T ss_dssp EECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETT
T ss_pred EEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECC
Confidence 99999999 9999998877666433 23569999999999999999999999999974
No 64
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=3.1e-33 Score=219.39 Aligned_cols=208 Identities=19% Similarity=0.270 Sum_probs=181.4
Q ss_pred eEEeecccccceEEEEECCC----C---CEEEEEeCCCcEEEeecCCCcE-----EEEEecc-----cccEEEEEEC---
Q psy4391 19 LKFTLAGHTKAVSSVKFSPN----G---EWLASSSADKLIKIWGAYDGKF-----EKTISGH-----KLGISDVAWS--- 78 (231)
Q Consensus 19 ~~~~~~~h~~~i~~~~~~~~----~---~~l~~~~~dg~i~i~~~~~~~~-----~~~~~~~-----~~~v~~~~~~--- 78 (231)
....+.+|...|.+++|+|+ + ++|++++.||.|++|+..++.. ...+..+ ...|.+++|+
T Consensus 54 ~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 133 (397)
T 1sq9_A 54 KSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASN 133 (397)
T ss_dssp GEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC
T ss_pred cceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeecc
Confidence 44566689999999999999 9 9999999999999999987765 6777777 5889999999
Q ss_pred -CCCCE-EEEecCCCcEEEEeCCC------ceeee-----ee-------cCCCcceEEEEECCCCCEEEEeecCCcEEEE
Q psy4391 79 -SDSRL-LVSGSDDKTLKIWELSS------GKCLK-----TL-------KGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138 (231)
Q Consensus 79 -~~~~~-l~~~~~~g~i~~~d~~~------~~~~~-----~~-------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~ 138 (231)
|+++. +++++.||.|++||+.+ ++.+. .+ ..+...+.+++|+|++ ++++++.|+.|++|
T Consensus 134 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~ 212 (397)
T 1sq9_A 134 DRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQIS 212 (397)
T ss_dssp ----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEE
T ss_pred CCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEE
Confidence 99999 99999999999999988 65555 55 3467789999999999 99999999999999
Q ss_pred ECCCCceeeeccC---C---CCCeEEEEEcCCCCeEEEEecC---CeEEEEeCCCCceeeeeecC------------CCC
Q psy4391 139 DVRTGKCLKTLPA---H---SDPVSAVHFNRDGSLIVSSSYD---GLCRIWDTASGQCLKTLIDD------------DNP 197 (231)
Q Consensus 139 d~~~~~~~~~~~~---~---~~~v~~~~~~~~~~~l~~~~~d---g~i~v~d~~~~~~~~~~~~~------------~~~ 197 (231)
|+++++.+..+.. | ...+.+++|+|++++|++++.| |.|++||+.+++.+..+... +..
T Consensus 213 d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (397)
T 1sq9_A 213 ELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSS 292 (397)
T ss_dssp ETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSS
T ss_pred ECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCC
Confidence 9999998888888 8 8999999999999999999999 99999999999887776541 567
Q ss_pred CeEEEEECCCCCEEEEEeCCCeEEEEeCCC
Q psy4391 198 PVSFVKFSPNGKYILAATLDNTLKLWDSYP 227 (231)
Q Consensus 198 ~i~~~~~s~~g~~l~~~s~d~~v~vwd~~~ 227 (231)
.+..++|+|++++|++++.||.|++||...
T Consensus 293 ~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 322 (397)
T 1sq9_A 293 WVMSLSFNDSGETLCSAGWDGKLRFWDVKT 322 (397)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTT
T ss_pred cEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 899999999999999999999999999743
No 65
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.7e-32 Score=242.39 Aligned_cols=209 Identities=30% Similarity=0.533 Sum_probs=188.3
Q ss_pred eEEeecccccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEecCCCcEEEEeC
Q psy4391 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWEL 98 (231)
Q Consensus 19 ~~~~~~~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~ 98 (231)
....+.+|.+.|++++|+|+|+++++|+.||.|++|+..++.....+.+|...|.+++|+|+++++++++.|+.|++||+
T Consensus 607 ~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~ 686 (1249)
T 3sfz_A 607 SRLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDS 686 (1249)
T ss_dssp CSEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred ceEEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEEC
Confidence 34567799999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeeeeecCCCcceEEEEECC--CCCEEEEeecCCcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeEEEEecCCe
Q psy4391 99 SSGKCLKTLKGHSNYVFCCNFNP--QSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGL 176 (231)
Q Consensus 99 ~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 176 (231)
.+++.+..+..|...+.++.|+| ++.++++++.|+.|++||+++++.+..+..|.+.|.+++|+|+++++++++.||.
T Consensus 687 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~ 766 (1249)
T 3sfz_A 687 ATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGT 766 (1249)
T ss_dssp TTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSE
T ss_pred CCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCe
Confidence 99999999999999999999999 5568999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCceeeeee------------------------------------------------------cCCCCCeEEE
Q psy4391 177 CRIWDTASGQCLKTLI------------------------------------------------------DDDNPPVSFV 202 (231)
Q Consensus 177 i~v~d~~~~~~~~~~~------------------------------------------------------~~~~~~i~~~ 202 (231)
|++||+.+++....+. ..+...+..+
T Consensus 767 v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~ 846 (1249)
T 3sfz_A 767 LRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYC 846 (1249)
T ss_dssp EEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEE
T ss_pred EEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEE
Confidence 9999987765433221 1334567788
Q ss_pred EECCCCCEEEEEeCCCeEEEEeCCC
Q psy4391 203 KFSPNGKYILAATLDNTLKLWDSYP 227 (231)
Q Consensus 203 ~~s~~g~~l~~~s~d~~v~vwd~~~ 227 (231)
+|+|+++++++++.||.|++||...
T Consensus 847 ~~sp~~~~l~~~~~dg~v~vwd~~~ 871 (1249)
T 3sfz_A 847 DFSPYDHLAVIALSQYCVELWNIDS 871 (1249)
T ss_dssp EECSSTTEEEEECSSSCEEEEETTT
T ss_pred EEcCCCCEEEEEeCCCeEEEEEcCC
Confidence 9999999999999999999999643
No 66
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=3.8e-32 Score=213.45 Aligned_cols=206 Identities=21% Similarity=0.430 Sum_probs=176.0
Q ss_pred EeecccccceEEEEECC-CCCEEEEEeCCCcEEEeecCCCcEEEEEe-------------cccccEEEEEECC-CCCEEE
Q psy4391 21 FTLAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTIS-------------GHKLGISDVAWSS-DSRLLV 85 (231)
Q Consensus 21 ~~~~~h~~~i~~~~~~~-~~~~l~~~~~dg~i~i~~~~~~~~~~~~~-------------~~~~~v~~~~~~~-~~~~l~ 85 (231)
..+.+|.+.|.+++|+| ++++|++|+.||.|++|+..++.....+. +|...|.+++|+| ++++++
T Consensus 37 ~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 116 (408)
T 4a11_B 37 DVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFT 116 (408)
T ss_dssp EECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEE
T ss_pred eeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEE
Confidence 44568999999999999 99999999999999999998764332222 4778899999999 778999
Q ss_pred EecCCCcEEEEeCCCceeeeeecCCCcceEEEEECCC---CCEEEEeecCCcEEEEECCCCceeeeccCCCCCeEEEEEc
Q psy4391 86 SGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQ---SNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFN 162 (231)
Q Consensus 86 ~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~ 162 (231)
+++.||.|++||+.+++....+. +...+.++.++|. +.++++++.++.|++||+++++.+..+..|...|.+++|+
T Consensus 117 s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~ 195 (408)
T 4a11_B 117 SSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWS 195 (408)
T ss_dssp EEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEEC
T ss_pred EEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEEC
Confidence 99999999999999988877776 5667888888884 4599999999999999999999888999999999999999
Q ss_pred CCCCe-EEEEecCCeEEEEeCCCCceeeeee---------------cCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCC
Q psy4391 163 RDGSL-IVSSSYDGLCRIWDTASGQCLKTLI---------------DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSY 226 (231)
Q Consensus 163 ~~~~~-l~~~~~dg~i~v~d~~~~~~~~~~~---------------~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~~ 226 (231)
|++++ +++++.||.|++||++++....... ..+...+..++|+|+|++|++++.||.|++||..
T Consensus 196 ~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~ 275 (408)
T 4a11_B 196 PRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSS 275 (408)
T ss_dssp SSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred CCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECC
Confidence 99985 8899999999999998765222111 2455679999999999999999999999999964
Q ss_pred C
Q psy4391 227 P 227 (231)
Q Consensus 227 ~ 227 (231)
.
T Consensus 276 ~ 276 (408)
T 4a11_B 276 N 276 (408)
T ss_dssp T
T ss_pred C
Confidence 3
No 67
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=3.2e-32 Score=210.97 Aligned_cols=210 Identities=22% Similarity=0.364 Sum_probs=171.5
Q ss_pred ceeEEeecccccceEEEEECCC---CCEEEEEeCCCcEEEeecCC-CcEE-EEEecccccEEEEEECCCCCEEEEecCCC
Q psy4391 17 YVLKFTLAGHTKAVSSVKFSPN---GEWLASSSADKLIKIWGAYD-GKFE-KTISGHKLGISDVAWSSDSRLLVSGSDDK 91 (231)
Q Consensus 17 ~~~~~~~~~h~~~i~~~~~~~~---~~~l~~~~~dg~i~i~~~~~-~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~~g 91 (231)
......+.+|.+.|++++|+|+ |++|++|+.||.|++|+..+ +... ..+.+|...|.+++|+|++++|++++.||
T Consensus 29 ~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg 108 (368)
T 3mmy_A 29 MKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDK 108 (368)
T ss_dssp TCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTS
T ss_pred cceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCC
Confidence 3344567899999999999999 69999999999999999986 4444 67778899999999999999999999999
Q ss_pred cEEEEeCCCceeeeeecCCCcceEEEEE--CCCCCEEEEeecCCcEEEEECCCCceeeeccCCC----------------
Q psy4391 92 TLKIWELSSGKCLKTLKGHSNYVFCCNF--NPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHS---------------- 153 (231)
Q Consensus 92 ~i~~~d~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~---------------- 153 (231)
.|++||+.+++... +..|...+.++.| +|++.++++++.|+.|++||+++++.+..+..+.
T Consensus 109 ~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (368)
T 3mmy_A 109 TAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVAT 187 (368)
T ss_dssp EEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEE
T ss_pred cEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEe
Confidence 99999999988766 4458888999999 9999999999999999999999887655443322
Q ss_pred -------------------------CCeEEEEEcCCCCe----EEEEecCCeEEEEeCCCC---ceeeeeecCCCC----
Q psy4391 154 -------------------------DPVSAVHFNRDGSL----IVSSSYDGLCRIWDTASG---QCLKTLIDDDNP---- 197 (231)
Q Consensus 154 -------------------------~~v~~~~~~~~~~~----l~~~~~dg~i~v~d~~~~---~~~~~~~~~~~~---- 197 (231)
....++++.++... +++++.||.+++||+... +....+..+...
T Consensus 188 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (368)
T 3mmy_A 188 AERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNT 267 (368)
T ss_dssp GGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----
T ss_pred CCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccc
Confidence 23445555554444 899999999999999876 333333332221
Q ss_pred -------CeEEEEECCCCCEEEEEeCCCeEEEEeCCC
Q psy4391 198 -------PVSFVKFSPNGKYILAATLDNTLKLWDSYP 227 (231)
Q Consensus 198 -------~i~~~~~s~~g~~l~~~s~d~~v~vwd~~~ 227 (231)
++..++|+|++++|++++.||.|++||...
T Consensus 268 ~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~ 304 (368)
T 3mmy_A 268 SAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDA 304 (368)
T ss_dssp CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTT
T ss_pred cccccccceEEEEEecCCCEEEEEccCCeEEEEECCC
Confidence 689999999999999999999999999754
No 68
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8e-32 Score=212.53 Aligned_cols=198 Identities=23% Similarity=0.451 Sum_probs=177.0
Q ss_pred cccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEecCCCcEEEEeCCCceeee
Q psy4391 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLK 105 (231)
Q Consensus 26 h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~ 105 (231)
|...|.+++|+|++++|++++.||.|++|+ .++.....+..|...+.+++|+|++++|++++.++.|++||+.+++...
T Consensus 107 ~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 185 (425)
T 1r5m_A 107 TTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQ 185 (425)
T ss_dssp -CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEE
T ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEE
Confidence 678999999999999999999999999999 5677888888899999999999999999999999999999998765433
Q ss_pred e--------------------------------------------------------ecCCCcceEEEEECCCCCEEEEe
Q psy4391 106 T--------------------------------------------------------LKGHSNYVFCCNFNPQSNLIVSG 129 (231)
Q Consensus 106 ~--------------------------------------------------------~~~~~~~v~~~~~~~~~~~l~~~ 129 (231)
. +..|...+.+++|+|++++++++
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 265 (425)
T 1r5m_A 186 HFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSA 265 (425)
T ss_dssp EECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEE
T ss_pred EeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEE
Confidence 2 23456678899999999999999
Q ss_pred ecCCcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeEEEEecCCeEEEEeCCCCceeeeeecCCCCCeEEEEECCCCC
Q psy4391 130 SFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK 209 (231)
Q Consensus 130 ~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~ 209 (231)
+.|+.|++||+++++.+..+..|...+.+++|+|++ ++++++.|+.|++||+.+++.+..+. .+...+..++|+|+++
T Consensus 266 ~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~i~~~~~s~~~~ 343 (425)
T 1r5m_A 266 SDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSI-VDGVPIFAGRISQDGQ 343 (425)
T ss_dssp ETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEE-CTTCCEEEEEECTTSS
T ss_pred cCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecc-cCCccEEEEEEcCCCC
Confidence 999999999999998888888899999999999999 99999999999999999988776655 3456789999999999
Q ss_pred EEEEEeCCCeEEEEeCC
Q psy4391 210 YILAATLDNTLKLWDSY 226 (231)
Q Consensus 210 ~l~~~s~d~~v~vwd~~ 226 (231)
+|++++.||.|++||..
T Consensus 344 ~l~~~~~dg~i~i~~~~ 360 (425)
T 1r5m_A 344 KYAVAFMDGQVNVYDLK 360 (425)
T ss_dssp EEEEEETTSCEEEEECH
T ss_pred EEEEEECCCeEEEEECC
Confidence 99999999999999963
No 69
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.8e-33 Score=218.24 Aligned_cols=208 Identities=21% Similarity=0.360 Sum_probs=181.4
Q ss_pred eEEeecccccceEEEEECCC-CCEEEEEeCCCcEEEeecCCCc------EEEE---EecccccEEEEEECCC-CCEEEEe
Q psy4391 19 LKFTLAGHTKAVSSVKFSPN-GEWLASSSADKLIKIWGAYDGK------FEKT---ISGHKLGISDVAWSSD-SRLLVSG 87 (231)
Q Consensus 19 ~~~~~~~h~~~i~~~~~~~~-~~~l~~~~~dg~i~i~~~~~~~------~~~~---~~~~~~~v~~~~~~~~-~~~l~~~ 87 (231)
....+.+|...|.+++|+|+ +++|++++.||.|++||..++. .... ...|...+.+++|+|+ +.+++++
T Consensus 105 ~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 184 (416)
T 2pm9_A 105 SMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASA 184 (416)
T ss_dssp EEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEE
T ss_pred chhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEE
Confidence 44566789999999999998 8899999999999999998765 2222 3467788999999998 7889999
Q ss_pred cCCCcEEEEeCCCceeeeeecCC------CcceEEEEECCCC-CEEEEeecCC---cEEEEECCCC-ceeeecc-CCCCC
Q psy4391 88 SDDKTLKIWELSSGKCLKTLKGH------SNYVFCCNFNPQS-NLIVSGSFDE---SVRIWDVRTG-KCLKTLP-AHSDP 155 (231)
Q Consensus 88 ~~~g~i~~~d~~~~~~~~~~~~~------~~~v~~~~~~~~~-~~l~~~~~d~---~i~v~d~~~~-~~~~~~~-~~~~~ 155 (231)
+.|+.|++||+++++.+..+..+ ...+.+++|+|++ .++++++.++ .|++||++++ ..+..+. .|...
T Consensus 185 ~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~ 264 (416)
T 2pm9_A 185 GSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKG 264 (416)
T ss_dssp SSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSC
T ss_pred cCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCc
Confidence 99999999999999888888765 6789999999997 6899999998 9999999986 5666777 78999
Q ss_pred eEEEEEcC-CCCeEEEEecCCeEEEEeCCCCceeeeeecCCCCCeEEEEECCCC-CEEEEEeCCCeEEEEeCCC
Q psy4391 156 VSAVHFNR-DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG-KYILAATLDNTLKLWDSYP 227 (231)
Q Consensus 156 v~~~~~~~-~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g-~~l~~~s~d~~v~vwd~~~ 227 (231)
|.+++|+| ++++|++++.||.|++||+.+++.+..+.. +...+..++|+|++ ++|++++.||.|++||...
T Consensus 265 v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~-~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~ 337 (416)
T 2pm9_A 265 ILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPA-RGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQN 337 (416)
T ss_dssp EEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEEC-SSSCCCCEEECTTCTTEEEECCSSSEEEEEESCC
T ss_pred eeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecC-CCCceEEEEECCCCCCEEEEEecCCcEEEEEccC
Confidence 99999999 999999999999999999999988777654 44578889999999 8999999999999999743
No 70
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1e-32 Score=219.51 Aligned_cols=211 Identities=19% Similarity=0.387 Sum_probs=172.5
Q ss_pred ccceeEEeecccc------------cceEEEEECCCC--CEEEEEeCCCcEEEeecCCCcEE------------------
Q psy4391 15 PNYVLKFTLAGHT------------KAVSSVKFSPNG--EWLASSSADKLIKIWGAYDGKFE------------------ 62 (231)
Q Consensus 15 ~~~~~~~~~~~h~------------~~i~~~~~~~~~--~~l~~~~~dg~i~i~~~~~~~~~------------------ 62 (231)
..+.+...+.+|. ..|.+++|+|++ ..|++++.||.|++|+..++...
T Consensus 69 ~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~ 148 (447)
T 3dw8_B 69 GEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTT 148 (447)
T ss_dssp CCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCC
T ss_pred cceeEecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCccc
Confidence 3455566778898 889999999998 78999999999999998653321
Q ss_pred ---------------------EE-EecccccEEEEEECCCCCEEEEecCCCcEEEEeCCC-ceeee-------eecCCCc
Q psy4391 63 ---------------------KT-ISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSS-GKCLK-------TLKGHSN 112 (231)
Q Consensus 63 ---------------------~~-~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~~-~~~~~-------~~~~~~~ 112 (231)
.. ..+|...|.+++|+|++++|+++ .|+.|++||+.+ ++... .+..|..
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 227 (447)
T 3dw8_B 149 VTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTE 227 (447)
T ss_dssp CCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCC
T ss_pred ccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCc
Confidence 12 24688889999999999999998 799999999984 44443 2457888
Q ss_pred ceEEEEECCCC-CEEEEeecCCcEEEEECCCCce----eeeccCCCC------------CeEEEEEcCCCCeEEEEecCC
Q psy4391 113 YVFCCNFNPQS-NLIVSGSFDESVRIWDVRTGKC----LKTLPAHSD------------PVSAVHFNRDGSLIVSSSYDG 175 (231)
Q Consensus 113 ~v~~~~~~~~~-~~l~~~~~d~~i~v~d~~~~~~----~~~~~~~~~------------~v~~~~~~~~~~~l~~~~~dg 175 (231)
.+.+++|+|++ +++++++.|+.|++||+++++. +..+..|.. .|.+++|+|++++|++++. +
T Consensus 228 ~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~ 306 (447)
T 3dw8_B 228 VITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-L 306 (447)
T ss_dssp CEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-S
T ss_pred ceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-C
Confidence 89999999998 9999999999999999998876 677777765 8999999999999999998 9
Q ss_pred eEEEEeCCC-CceeeeeecCCCC--------------CeEEEEECCCCCEEEEEeCCCeEEEEeCCC
Q psy4391 176 LCRIWDTAS-GQCLKTLIDDDNP--------------PVSFVKFSPNGKYILAATLDNTLKLWDSYP 227 (231)
Q Consensus 176 ~i~v~d~~~-~~~~~~~~~~~~~--------------~i~~~~~s~~g~~l~~~s~d~~v~vwd~~~ 227 (231)
.|++||+++ ++.+..+..+... .+..++|+|+|++|++++.||.|++||...
T Consensus 307 ~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~ 373 (447)
T 3dw8_B 307 SVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNT 373 (447)
T ss_dssp EEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTT
T ss_pred eEEEEeCCCCccccceeeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCC
Confidence 999999987 7666665433210 022389999999999999999999999743
No 71
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.2e-33 Score=233.87 Aligned_cols=207 Identities=23% Similarity=0.371 Sum_probs=177.2
Q ss_pred EeecccccceEEEEECCCCCEEEEEeCCCcEEEeecC--CCcEEEEEecccccEEEEEECCC--CCEEEEecCCCcEEEE
Q psy4391 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY--DGKFEKTISGHKLGISDVAWSSD--SRLLVSGSDDKTLKIW 96 (231)
Q Consensus 21 ~~~~~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~~g~i~~~ 96 (231)
..+.+|.+.|++++|+|++++|++|+.||.|++|+.. +......+.+|...|.+++|+|+ ++++++++.||.|++|
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vw 82 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIW 82 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEE
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEE
Confidence 4567999999999999999999999999999999987 44556677889999999999988 9999999999999999
Q ss_pred eCCCce--eeeeecCCCcceEEEEECCC--CCEEEEeecCCcEEEEECCCCc--eeeeccCCCCCeEEEEEcC-------
Q psy4391 97 ELSSGK--CLKTLKGHSNYVFCCNFNPQ--SNLIVSGSFDESVRIWDVRTGK--CLKTLPAHSDPVSAVHFNR------- 163 (231)
Q Consensus 97 d~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~v~d~~~~~--~~~~~~~~~~~v~~~~~~~------- 163 (231)
|+.+++ ....+..|...+.++.|+|+ +..+++++.||.|++||++.+. ....+..|...|.+++|+|
T Consensus 83 d~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~ 162 (753)
T 3jro_A 83 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDG 162 (753)
T ss_dssp EEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC-----
T ss_pred ECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCccccccc
Confidence 999876 66777788999999999999 9999999999999999998773 3345567889999999999
Q ss_pred ------CCCeEEEEecCCeEEEEeCCCCcee---eeeecCCCCCeEEEEECCC---CCEEEEEeCCCeEEEEeCCC
Q psy4391 164 ------DGSLIVSSSYDGLCRIWDTASGQCL---KTLIDDDNPPVSFVKFSPN---GKYILAATLDNTLKLWDSYP 227 (231)
Q Consensus 164 ------~~~~l~~~~~dg~i~v~d~~~~~~~---~~~~~~~~~~i~~~~~s~~---g~~l~~~s~d~~v~vwd~~~ 227 (231)
++.++++|+.||.|++||++++... ......+..+|.+++|+|+ +++|++++.||.|++||...
T Consensus 163 ~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~ 238 (753)
T 3jro_A 163 EHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDN 238 (753)
T ss_dssp ----CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESS
T ss_pred ccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCC
Confidence 5899999999999999999876422 2223355678999999999 99999999999999999643
No 72
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=5e-31 Score=202.58 Aligned_cols=208 Identities=32% Similarity=0.544 Sum_probs=177.3
Q ss_pred eEEeecccccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEecCCCcEEEEeC
Q psy4391 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWEL 98 (231)
Q Consensus 19 ~~~~~~~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~ 98 (231)
...++.+|...|.+++|+|++++|++++.|+.|++|+............+...+....++++++.+++++.|+.+++||.
T Consensus 78 ~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~ 157 (340)
T 4aow_A 78 PQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNT 157 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECT
T ss_pred eeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEe
Confidence 34567899999999999999999999999999999999888877777777778888999999999999999999999999
Q ss_pred CCcee-eeeecCCCcceEEEEECCCC--CEEEEeecCCcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeEEEEecCC
Q psy4391 99 SSGKC-LKTLKGHSNYVFCCNFNPQS--NLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 175 (231)
Q Consensus 99 ~~~~~-~~~~~~~~~~v~~~~~~~~~--~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 175 (231)
..... ......|...+..+++++++ .++++++.|+.|++||+++++.+..+..|.++|.+++|+|++++|++++.||
T Consensus 158 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg 237 (340)
T 4aow_A 158 LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDG 237 (340)
T ss_dssp TSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTC
T ss_pred CCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCC
Confidence 76543 33455677888899998764 5788999999999999999999999999999999999999999999999999
Q ss_pred eEEEEeCCCCceeeeeec------------------------------------------------CCCCCeEEEEECCC
Q psy4391 176 LCRIWDTASGQCLKTLID------------------------------------------------DDNPPVSFVKFSPN 207 (231)
Q Consensus 176 ~i~v~d~~~~~~~~~~~~------------------------------------------------~~~~~i~~~~~s~~ 207 (231)
.|++||+.+.+.+..+.. .+...|.+++|+|+
T Consensus 238 ~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~d 317 (340)
T 4aow_A 238 QAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSAD 317 (340)
T ss_dssp EEEEEETTTTEEEEEEECSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTT
T ss_pred eEEEEEeccCceeeeecCCceEEeeecCCCCceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCC
Confidence 999999987654332210 12345778889999
Q ss_pred CCEEEEEeCCCeEEEEeCC
Q psy4391 208 GKYILAATLDNTLKLWDSY 226 (231)
Q Consensus 208 g~~l~~~s~d~~v~vwd~~ 226 (231)
|++|++|+.||.|+|||..
T Consensus 318 g~~l~sgs~Dg~v~iW~~~ 336 (340)
T 4aow_A 318 GQTLFAGYTDNLVRVWQVT 336 (340)
T ss_dssp SSEEEEEETTSCEEEEEEE
T ss_pred CCEEEEEeCCCEEEEEeCC
Confidence 9999999999999999864
No 73
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.1e-32 Score=217.62 Aligned_cols=201 Identities=15% Similarity=0.139 Sum_probs=176.8
Q ss_pred cccccceEEEEECCCCCEE-EEEeCCCcEEEeecC--CCcEEEEEe--cccccEEEEEECCCCCEEEEecCCCcEEEEeC
Q psy4391 24 AGHTKAVSSVKFSPNGEWL-ASSSADKLIKIWGAY--DGKFEKTIS--GHKLGISDVAWSSDSRLLVSGSDDKTLKIWEL 98 (231)
Q Consensus 24 ~~h~~~i~~~~~~~~~~~l-~~~~~dg~i~i~~~~--~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~ 98 (231)
.+|...|.+++|+|++++| ++++.||.|++|+.. ++.....+. .+...+.+++|+|++++|++++.+|.+++|++
T Consensus 99 ~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~ 178 (450)
T 2vdu_B 99 PPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDI 178 (450)
T ss_dssp -CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred CccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEec
Confidence 4677789999999999996 888899999999998 777777765 45578999999999999999999999999999
Q ss_pred CCceeee----eecCCCcceEEEEECCC---CCEEEEeecCCcEEEEECCCCceeee-ccCCCCCeEEEEEcCCCCeEEE
Q psy4391 99 SSGKCLK----TLKGHSNYVFCCNFNPQ---SNLIVSGSFDESVRIWDVRTGKCLKT-LPAHSDPVSAVHFNRDGSLIVS 170 (231)
Q Consensus 99 ~~~~~~~----~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~v~d~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~ 170 (231)
.+++... .+.+|...+.+++|+|+ +++|++++.|+.|++||+++++.+.. +..|...|.+++|+ ++++|++
T Consensus 179 ~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s 257 (450)
T 2vdu_B 179 NSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLS 257 (450)
T ss_dssp TSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEE
T ss_pred CCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEE
Confidence 8876543 66678889999999999 99999999999999999999887776 55889999999999 9999999
Q ss_pred EecCCeEEEEeCCCCceeeeeec------------------------CCCCCeEEEEECCCCCEEEEEe-CCCeEEEEeC
Q psy4391 171 SSYDGLCRIWDTASGQCLKTLID------------------------DDNPPVSFVKFSPNGKYILAAT-LDNTLKLWDS 225 (231)
Q Consensus 171 ~~~dg~i~v~d~~~~~~~~~~~~------------------------~~~~~i~~~~~s~~g~~l~~~s-~d~~v~vwd~ 225 (231)
++.|+.|++||+.+++.+..+.. .....+..++|+|++++|++++ .|+.|++||.
T Consensus 258 ~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 258 AGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp EESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEE
T ss_pred EeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEe
Confidence 99999999999999987776642 2234688999999999999999 8999999997
No 74
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=4.3e-32 Score=209.71 Aligned_cols=206 Identities=17% Similarity=0.301 Sum_probs=173.4
Q ss_pred eeEEeecccccceEEEEECCCCCEE-EEEeC---CCcEEEeecCCCcEEEEE-ecccccEEEEEECCC---CCEEEEecC
Q psy4391 18 VLKFTLAGHTKAVSSVKFSPNGEWL-ASSSA---DKLIKIWGAYDGKFEKTI-SGHKLGISDVAWSSD---SRLLVSGSD 89 (231)
Q Consensus 18 ~~~~~~~~h~~~i~~~~~~~~~~~l-~~~~~---dg~i~i~~~~~~~~~~~~-~~~~~~v~~~~~~~~---~~~l~~~~~ 89 (231)
.+...+.+|...|.+++|+|+++.+ ++++. ||.|++|+..+++..... .+|...|.+++|+|+ ++++++++.
T Consensus 9 ~~~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~ 88 (357)
T 3i2n_A 9 IIAHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDF 88 (357)
T ss_dssp EEEEEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEET
T ss_pred HhhhhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecC
Confidence 3455667899999999999999755 45655 899999999887765443 367789999999998 699999999
Q ss_pred CCcEEEEeCCCce-eeeeecCCCcceEEEE------ECCCCCEEEEeecCCcEEEEECCCCc-eeeeccCCCC----CeE
Q psy4391 90 DKTLKIWELSSGK-CLKTLKGHSNYVFCCN------FNPQSNLIVSGSFDESVRIWDVRTGK-CLKTLPAHSD----PVS 157 (231)
Q Consensus 90 ~g~i~~~d~~~~~-~~~~~~~~~~~v~~~~------~~~~~~~l~~~~~d~~i~v~d~~~~~-~~~~~~~~~~----~v~ 157 (231)
||.|++||+.+++ ....+..|...+.++. |+|+++++++++.|+.|++||++++. .+..+..+.+ .+.
T Consensus 89 dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~ 168 (357)
T 3i2n_A 89 GGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCW 168 (357)
T ss_dssp TSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEE
T ss_pred CCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceE
Confidence 9999999999887 7888888999999985 57899999999999999999999886 5666655444 788
Q ss_pred EEE----EcCCCCeEEEEecCCeEEEEeCCCCceeeeeecCCCCCeEEEEECC---CCCEEEEEeCCCeEEEEeC
Q psy4391 158 AVH----FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP---NGKYILAATLDNTLKLWDS 225 (231)
Q Consensus 158 ~~~----~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~---~g~~l~~~s~d~~v~vwd~ 225 (231)
+++ |+|+++++++++.||.|++||+++++.... ..+...+..++|+| ++.+|++++.||.|++||.
T Consensus 169 ~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~ 241 (357)
T 3i2n_A 169 TVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE--TNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDM 241 (357)
T ss_dssp EEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE--EECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEE
T ss_pred EEEEEeccCCCCCEEEEEccCCeEEEEECccCceeee--cCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeC
Confidence 888 788999999999999999999999886443 33456799999999 9999999999999999996
No 75
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=8.6e-33 Score=219.95 Aligned_cols=209 Identities=21% Similarity=0.374 Sum_probs=164.4
Q ss_pred EEeecccccceEEEEECC-CCCEEEEEeCCCcEEEeecCCCcEEEEEecc--cccEEEEEECCCCCEEEEecCCCcEEEE
Q psy4391 20 KFTLAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTISGH--KLGISDVAWSSDSRLLVSGSDDKTLKIW 96 (231)
Q Consensus 20 ~~~~~~h~~~i~~~~~~~-~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~~g~i~~~ 96 (231)
...+.+|.+.|++++|+| ++++|++|+.||.|++||+++.........+ ...+.+++|+|++++|++++.||.|++|
T Consensus 157 ~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~w 236 (435)
T 4e54_B 157 FIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILL 236 (435)
T ss_dssp EECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEE
T ss_pred EEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeee
Confidence 345668999999999998 6889999999999999999765443333322 3346789999999999999999999999
Q ss_pred eCCCceeeeeecCCCcceEEEEECCCCC-EEEEeecCCcEEEEECCCCceeee---ccCCCCCeEEEEEcCCCCeEEEEe
Q psy4391 97 ELSSGKCLKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVRTGKCLKT---LPAHSDPVSAVHFNRDGSLIVSSS 172 (231)
Q Consensus 97 d~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~~~~ 172 (231)
|++. +.+..+..|...|.+++|+|++. ++++++.|+.|++||+++.+.... ...|..+|.+++|+|++.+|++++
T Consensus 237 d~~~-~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~ 315 (435)
T 4e54_B 237 NMDG-KELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTD 315 (435)
T ss_dssp ESSS-CBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEE
T ss_pred ccCc-ceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEc
Confidence 9875 45667788999999999999876 788999999999999988764433 356888999999999999999999
Q ss_pred cCCeEEEEeCCCCceeeee------------------------------------------------------------e
Q psy4391 173 YDGLCRIWDTASGQCLKTL------------------------------------------------------------I 192 (231)
Q Consensus 173 ~dg~i~v~d~~~~~~~~~~------------------------------------------------------------~ 192 (231)
.||.|++||+.+++....+ .
T Consensus 316 ~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~ 395 (435)
T 4e54_B 316 QKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLY 395 (435)
T ss_dssp SSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEEC
T ss_pred CCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEe
Confidence 9999999998764321110 1
Q ss_pred cCCCCCeEEE-EECCCCCEEEEEeCCCeEEEEeCCCCCC
Q psy4391 193 DDDNPPVSFV-KFSPNGKYILAATLDNTLKLWDSYPCLP 230 (231)
Q Consensus 193 ~~~~~~i~~~-~~s~~g~~l~~~s~d~~v~vwd~~~~~~ 230 (231)
..+...|.++ +|+|+|++|++|+ |+.|+|||..+.-|
T Consensus 396 ~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~~gk~ 433 (435)
T 4e54_B 396 DPESSGISSLNEFNPMGDTLASAM-GYHILIWSQQEART 433 (435)
T ss_dssp CSSCCCCCCEEEECTTSSCEEEEC-SSEEEECCCC----
T ss_pred CCCCCcEEEEEEECCCCCEEEEEc-CCcEEEEECCcCee
Confidence 1122233444 6999999999876 88999999876543
No 76
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.5e-32 Score=212.80 Aligned_cols=203 Identities=20% Similarity=0.378 Sum_probs=174.7
Q ss_pred eecccccceEEEEECCC----CCEEEEEeCCCcEEEeecCCCcEEEEEec-----ccccEEEEEECCC----CCEEEEec
Q psy4391 22 TLAGHTKAVSSVKFSPN----GEWLASSSADKLIKIWGAYDGKFEKTISG-----HKLGISDVAWSSD----SRLLVSGS 88 (231)
Q Consensus 22 ~~~~h~~~i~~~~~~~~----~~~l~~~~~dg~i~i~~~~~~~~~~~~~~-----~~~~v~~~~~~~~----~~~l~~~~ 88 (231)
...+|.+.|.+++|+|+ ...+++++.++.|++|+..++.....+.. +...+.+++|+|+ ++++++++
T Consensus 13 ~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~ 92 (366)
T 3k26_A 13 LKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAG 92 (366)
T ss_dssp EECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEE
T ss_pred eecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEec
Confidence 34589999999999984 44666666778999999987776666654 3467999999998 67899999
Q ss_pred CCCcEEEEeCCCceeeeeecCCCcceEEEEECC-CCCEEEEeecCCcEEEEECCCCceeeec---cCCCCCeEEEEEcCC
Q psy4391 89 DDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVRTGKCLKTL---PAHSDPVSAVHFNRD 164 (231)
Q Consensus 89 ~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~v~d~~~~~~~~~~---~~~~~~v~~~~~~~~ 164 (231)
.||.|++||+.+++.+..+..|...+.+++|+| ++.++++++.|+.|++||+++++.+..+ ..|...|.+++|+|+
T Consensus 93 ~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 172 (366)
T 3k26_A 93 SRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLL 172 (366)
T ss_dssp TTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTT
T ss_pred CCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCC
Confidence 999999999999999999999999999999999 8999999999999999999999888777 678999999999999
Q ss_pred CCeEEEEecCCeEEEEeCCCCceeeeeec---------------------------CCCCCeEEEEECCCCCEEEEEeCC
Q psy4391 165 GSLIVSSSYDGLCRIWDTASGQCLKTLID---------------------------DDNPPVSFVKFSPNGKYILAATLD 217 (231)
Q Consensus 165 ~~~l~~~~~dg~i~v~d~~~~~~~~~~~~---------------------------~~~~~i~~~~~s~~g~~l~~~s~d 217 (231)
++++++++.||.|++||+++++....+.. .+...|.+++|+ +++|++++.|
T Consensus 173 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d 250 (366)
T 3k26_A 173 GEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCE 250 (366)
T ss_dssp SSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSS
T ss_pred CCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecC
Confidence 99999999999999999988764432211 155678889998 7899999999
Q ss_pred CeEEEEeCC
Q psy4391 218 NTLKLWDSY 226 (231)
Q Consensus 218 ~~v~vwd~~ 226 (231)
+.|++||..
T Consensus 251 ~~i~~wd~~ 259 (366)
T 3k26_A 251 NAIVCWKPG 259 (366)
T ss_dssp SEEEEEEES
T ss_pred CEEEEEeCC
Confidence 999999964
No 77
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.9e-31 Score=211.29 Aligned_cols=208 Identities=25% Similarity=0.511 Sum_probs=169.6
Q ss_pred EeecccccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEec---------------------------------
Q psy4391 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG--------------------------------- 67 (231)
Q Consensus 21 ~~~~~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~--------------------------------- 67 (231)
+.+.+|...|++++|+|+|++|++|+.||.|++|+..+++....+.+
T Consensus 141 ~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~ 220 (420)
T 4gga_A 141 LQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAE 220 (420)
T ss_dssp EECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSS
T ss_pred EEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCCCEEEEEeCCCceeEeeecccc
Confidence 44567888999999999999999999999999999987765544333
Q ss_pred --------ccccEEEEEECCCCCEEEEecCCCcEEEEeCCCce----eeeeecCCCcceEEEEECCCC-CEEEE--eecC
Q psy4391 68 --------HKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGK----CLKTLKGHSNYVFCCNFNPQS-NLIVS--GSFD 132 (231)
Q Consensus 68 --------~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~----~~~~~~~~~~~v~~~~~~~~~-~~l~~--~~~d 132 (231)
|...+..+.|+|+++++++++.|+.+++|+..+++ .+.....+...|.+++|+|.+ .++++ |+.|
T Consensus 221 ~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D 300 (420)
T 4gga_A 221 HHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSD 300 (420)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTT
T ss_pred eeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCC
Confidence 33445667778888888888888888888887654 234455677889999999965 45554 3579
Q ss_pred CcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeEEEEe--cCCeEEEEeCCCCceeeeeecCCCCCeEEEEECCCCCE
Q psy4391 133 ESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSS--YDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKY 210 (231)
Q Consensus 133 ~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~dg~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~ 210 (231)
+.|++||+++++....+..+ ..+.++.|+|+++.+++++ .|+.|++||+.+++.+..+.. +...|..++|+|+|++
T Consensus 301 ~~I~iwd~~t~~~~~~~~~~-~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~g-H~~~V~~l~~spdg~~ 378 (420)
T 4gga_A 301 RHIRIWNVCSGACLSAVDAH-SQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKG-HTSRVLSLTMSPDGAT 378 (420)
T ss_dssp CEEEEEETTTTEEEEEEECS-SCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSSC
T ss_pred CEEEEEeCCccccceeeccc-cceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcC-CCCCEEEEEEcCCCCE
Confidence 99999999999988887655 5788899999999888765 789999999999998887754 5668999999999999
Q ss_pred EEEEeCCCeEEEEeCCCCCC
Q psy4391 211 ILAATLDNTLKLWDSYPCLP 230 (231)
Q Consensus 211 l~~~s~d~~v~vwd~~~~~~ 230 (231)
|++|+.|++|+|||.++.-|
T Consensus 379 l~S~s~D~tvriWdv~~~~~ 398 (420)
T 4gga_A 379 VASAAADETLRLWRCFELDP 398 (420)
T ss_dssp EEEEETTTEEEEECCSCSSC
T ss_pred EEEEecCCeEEEEECCCCCc
Confidence 99999999999999866443
No 78
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.7e-31 Score=210.26 Aligned_cols=198 Identities=26% Similarity=0.434 Sum_probs=177.5
Q ss_pred ccccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEecCCCcEEEEeCC-Ccee
Q psy4391 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELS-SGKC 103 (231)
Q Consensus 25 ~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~-~~~~ 103 (231)
.|...|.+++|+|++++|++|+.||.|++|+..+++....+.+|...+.+++| +++.+++++.||.|++||+. ....
T Consensus 132 ~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~ 209 (401)
T 4aez_A 132 DESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQ 209 (401)
T ss_dssp CTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCE
T ss_pred CCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcce
Confidence 37889999999999999999999999999999999999999999999999999 45799999999999999998 4566
Q ss_pred eeeecCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCe-EEEEe--cCCeEEEE
Q psy4391 104 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSL-IVSSS--YDGLCRIW 180 (231)
Q Consensus 104 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~--~dg~i~v~ 180 (231)
...+..|...+.+++|+|++.++++++.|+.|++||+++++.+..+..|...|.+++|+|++.. +++++ .|+.|++|
T Consensus 210 ~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~ 289 (401)
T 4aez_A 210 IGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFW 289 (401)
T ss_dssp EEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEE
T ss_pred eeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEE
Confidence 7778889999999999999999999999999999999999988888889999999999997754 45544 79999999
Q ss_pred eCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEe--CCCeEEEEeCC
Q psy4391 181 DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT--LDNTLKLWDSY 226 (231)
Q Consensus 181 d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s--~d~~v~vwd~~ 226 (231)
|+.+++.+..+. ....+..++|+|+++++++++ .||.|++||..
T Consensus 290 d~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~ 335 (401)
T 4aez_A 290 NAATGARVNTVD--AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYS 335 (401)
T ss_dssp ETTTCCEEEEEE--CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEE
T ss_pred ECCCCCEEEEEe--CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecC
Confidence 999998877764 345799999999999999954 89999999964
No 79
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-32 Score=216.71 Aligned_cols=203 Identities=17% Similarity=0.319 Sum_probs=176.2
Q ss_pred ccccceEEEEECCCCCEEEEEeCCCcEEEeecCC----CcEEEEEecccccEEEEEECCC-CCEEEEecCCCcEEEEeCC
Q psy4391 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD----GKFEKTISGHKLGISDVAWSSD-SRLLVSGSDDKTLKIWELS 99 (231)
Q Consensus 25 ~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~----~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~~g~i~~~d~~ 99 (231)
.|...|.+++|+|++++|++++.||.|++|+..+ ......+.+|...|.+++|+|+ ++++++++.|+.|++||+.
T Consensus 65 ~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~ 144 (416)
T 2pm9_A 65 QVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMN 144 (416)
T ss_dssp CCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTT
T ss_pred ecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECC
Confidence 5788999999999999999999999999999976 3477778889999999999998 8999999999999999998
Q ss_pred Cce------eeee---ecCCCcceEEEEECCC-CCEEEEeecCCcEEEEECCCCceeeeccCC------CCCeEEEEEcC
Q psy4391 100 SGK------CLKT---LKGHSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVRTGKCLKTLPAH------SDPVSAVHFNR 163 (231)
Q Consensus 100 ~~~------~~~~---~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~------~~~v~~~~~~~ 163 (231)
+++ .... ...|...+.+++|+|+ +.++++++.|+.|++||+++++.+..+..+ ...+.+++|+|
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 224 (416)
T 2pm9_A 145 KCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHP 224 (416)
T ss_dssp TTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECS
T ss_pred CCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECC
Confidence 876 3222 3567788999999999 789999999999999999999888887766 78899999999
Q ss_pred CC-CeEEEEecCC---eEEEEeCCCCc-eeeeeecCCCCCeEEEEECC-CCCEEEEEeCCCeEEEEeCCC
Q psy4391 164 DG-SLIVSSSYDG---LCRIWDTASGQ-CLKTLIDDDNPPVSFVKFSP-NGKYILAATLDNTLKLWDSYP 227 (231)
Q Consensus 164 ~~-~~l~~~~~dg---~i~v~d~~~~~-~~~~~~~~~~~~i~~~~~s~-~g~~l~~~s~d~~v~vwd~~~ 227 (231)
++ .++++++.|+ .|++||+++++ ....+...+...+..++|+| ++++|++++.||.|++||...
T Consensus 225 ~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~ 294 (416)
T 2pm9_A 225 KNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPES 294 (416)
T ss_dssp SCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSS
T ss_pred CCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCC
Confidence 97 5889999998 99999999864 34433315667899999999 999999999999999999744
No 80
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-31 Score=203.45 Aligned_cols=208 Identities=25% Similarity=0.401 Sum_probs=181.8
Q ss_pred CCCccceeEEeecccccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEecCCC
Q psy4391 12 NPKPNYVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDK 91 (231)
Q Consensus 12 ~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g 91 (231)
+|...+.+..++.+|.+.|.+++| +++++|++++.||.|++|+..++.....+..|...+.+++|+|+++++++++.|+
T Consensus 3 d~~~~~~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 81 (313)
T 3odt_A 3 DPFTGYQLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDT 81 (313)
T ss_dssp --CCCCEEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTS
T ss_pred CccccHHHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCC
Confidence 345566777888999999999999 9999999999999999999988888888888899999999999999999999999
Q ss_pred cEEEEeCCCc---eeeeeecCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeeccCCCCCeEEEEEcC-CCCe
Q psy4391 92 TLKIWELSSG---KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNR-DGSL 167 (231)
Q Consensus 92 ~i~~~d~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~-~~~~ 167 (231)
.+++|++... +....+..|...+.++.| +++.+++++.|+.|++|| .++....+..|..++.++++.| ++.+
T Consensus 82 ~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~ 157 (313)
T 3odt_A 82 MINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENK 157 (313)
T ss_dssp CEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTE
T ss_pred eEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCE
Confidence 9999998753 456677788899999998 578999999999999999 6677788888999999999988 8999
Q ss_pred EEEEecCCeEEEEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCC
Q psy4391 168 IVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSYP 227 (231)
Q Consensus 168 l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~~~ 227 (231)
+++++.||.+++||. .+....+...+...+..++|+|++. +++++.||.|++||...
T Consensus 158 l~~~~~d~~i~i~d~--~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~ 214 (313)
T 3odt_A 158 FLTASADKTIKLWQN--DKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHT 214 (313)
T ss_dssp EEEEETTSCEEEEET--TEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTT
T ss_pred EEEEECCCCEEEEec--CceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCc
Confidence 999999999999993 4445555554677899999999998 89999999999999753
No 81
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=1.6e-32 Score=207.32 Aligned_cols=197 Identities=17% Similarity=0.201 Sum_probs=152.6
Q ss_pred ccceEEEEECCC----CCEEEEEeC--------------------CCcEEEeec-CCCcEEEEEecccccEEEEEECC--
Q psy4391 27 TKAVSSVKFSPN----GEWLASSSA--------------------DKLIKIWGA-YDGKFEKTISGHKLGISDVAWSS-- 79 (231)
Q Consensus 27 ~~~i~~~~~~~~----~~~l~~~~~--------------------dg~i~i~~~-~~~~~~~~~~~~~~~v~~~~~~~-- 79 (231)
.+.|.+++++|+ ++.+++++. |+.|++|++ .+++....+..|...+..++|+|
T Consensus 111 ~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~ 190 (356)
T 2w18_A 111 IREIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQ 190 (356)
T ss_dssp EEEEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEE
T ss_pred ccceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccC
Confidence 346778888888 777776553 788888888 44777777777877888888888
Q ss_pred -CCCEEEEecCCCcEEEEeCCCceeeeeecCCC---cceEEEEECCCCCEE------------EEeecCCcEEEEECCCC
Q psy4391 80 -DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHS---NYVFCCNFNPQSNLI------------VSGSFDESVRIWDVRTG 143 (231)
Q Consensus 80 -~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l------------~~~~~d~~i~v~d~~~~ 143 (231)
++..|++++.|++|++||+++++.++.+.++. ..+.+++|+|++.++ ++|+.|+++++||..++
T Consensus 191 g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tg 270 (356)
T 2w18_A 191 GMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTT 270 (356)
T ss_dssp TSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTT
T ss_pred CCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCC
Confidence 67899999999999999999999999987643 356677899999876 56788999999999999
Q ss_pred ceeeec-----cCCCCCeEEEEEcCCCCeEEEEecCCeEEEEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEeCCC
Q psy4391 144 KCLKTL-----PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN 218 (231)
Q Consensus 144 ~~~~~~-----~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~ 218 (231)
+.+..+ ..|...+.+..+ ++.++++++.|++|++||+.+++.+.++..+....+..++|+|||++|++|+.|+
T Consensus 271 k~l~v~~~~~p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~ 348 (356)
T 2w18_A 271 LSVGVMLYCLPPGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDG 348 (356)
T ss_dssp EEEEEEEECCCTTCCCCEEEEEE--ETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTS
T ss_pred EEEEEEEeeccCCCcceeEcccc--CCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCC
Confidence 876554 244444443333 4788999999999999999999998887655555566789999999999999999
Q ss_pred eEEEEeC
Q psy4391 219 TLKLWDS 225 (231)
Q Consensus 219 ~v~vwd~ 225 (231)
+|+|||.
T Consensus 349 TIklWd~ 355 (356)
T 2w18_A 349 NIFVYHY 355 (356)
T ss_dssp CEEEEEE
T ss_pred cEEEecC
Confidence 9999985
No 82
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.6e-31 Score=205.15 Aligned_cols=207 Identities=19% Similarity=0.301 Sum_probs=181.6
Q ss_pred eEEeecccccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEecCC-----CcE
Q psy4391 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDD-----KTL 93 (231)
Q Consensus 19 ~~~~~~~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-----g~i 93 (231)
....+.+|...|.+++|+|++++|++++.||.|++|+..+++....+. +...+.+++|+|+++++++++.+ +.|
T Consensus 66 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i 144 (369)
T 3zwl_B 66 RLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSI 144 (369)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEE
T ss_pred hhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEE
Confidence 345677899999999999999999999999999999999888887777 67789999999999999999998 999
Q ss_pred EEEeCCCce-----------eeeeecCCCc--ceEEEEECCCCCEEEEeecCCcEEEEECCC-CceeeeccCCCCCeEEE
Q psy4391 94 KIWELSSGK-----------CLKTLKGHSN--YVFCCNFNPQSNLIVSGSFDESVRIWDVRT-GKCLKTLPAHSDPVSAV 159 (231)
Q Consensus 94 ~~~d~~~~~-----------~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~-~~~~~~~~~~~~~v~~~ 159 (231)
++||+.... ....+..+.. .+.+++|+|+++++++++.++.|++||+++ ++.+..+..|...+.++
T Consensus 145 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~ 224 (369)
T 3zwl_B 145 NIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDM 224 (369)
T ss_dssp EEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEE
T ss_pred EEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEE
Confidence 999987543 2223334444 789999999999999999999999999998 67788888899999999
Q ss_pred EEcCCCCeEEEEecCCeEEEEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEeCCC--------------eEEEEeC
Q psy4391 160 HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN--------------TLKLWDS 225 (231)
Q Consensus 160 ~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~--------------~v~vwd~ 225 (231)
+|+|++++|++++.||.|++||+.+++.+..+. ....+..++|+|+++++++++.++ .+++||.
T Consensus 225 ~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~ 302 (369)
T 3zwl_B 225 QFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE--TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHK 302 (369)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTCCEEEEEE--CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEET
T ss_pred EECCCCCEEEEecCCceEEEEECCCCceeeeec--CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEec
Confidence 999999999999999999999999998877765 456789999999999999999988 8999997
Q ss_pred CCC
Q psy4391 226 YPC 228 (231)
Q Consensus 226 ~~~ 228 (231)
...
T Consensus 303 ~~~ 305 (369)
T 3zwl_B 303 IFE 305 (369)
T ss_dssp TTC
T ss_pred CCC
Confidence 543
No 83
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=8.5e-32 Score=213.93 Aligned_cols=207 Identities=28% Similarity=0.506 Sum_probs=175.8
Q ss_pred eeEEeecccccceEEEEECCCCC-EEEEEeCCCcEEEeecCCCcE-------EEEEecccccEEEEEECC-CCCEEEEec
Q psy4391 18 VLKFTLAGHTKAVSSVKFSPNGE-WLASSSADKLIKIWGAYDGKF-------EKTISGHKLGISDVAWSS-DSRLLVSGS 88 (231)
Q Consensus 18 ~~~~~~~~h~~~i~~~~~~~~~~-~l~~~~~dg~i~i~~~~~~~~-------~~~~~~~~~~v~~~~~~~-~~~~l~~~~ 88 (231)
....++.+|...|.+++|+|++. +|++|+.||.|++|++..+.. ...+..|...|.+++|+| ++..+++++
T Consensus 172 ~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~ 251 (430)
T 2xyi_A 172 QPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVA 251 (430)
T ss_dssp CCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEE
T ss_pred CCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEe
Confidence 34456678999999999999998 999999999999999976321 345567888899999999 678889999
Q ss_pred CCCcEEEEeCCCc---eeeeeecCCCcceEEEEECCCCC-EEEEeecCCcEEEEECCC-CceeeeccCCCCCeEEEEEcC
Q psy4391 89 DDKTLKIWELSSG---KCLKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVRT-GKCLKTLPAHSDPVSAVHFNR 163 (231)
Q Consensus 89 ~~g~i~~~d~~~~---~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~v~d~~~-~~~~~~~~~~~~~v~~~~~~~ 163 (231)
.++.|++||+.++ +....+..|...+.+++|+|++. ++++|+.|+.|++||++. +..+..+..|...|.+++|+|
T Consensus 252 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp 331 (430)
T 2xyi_A 252 DDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSP 331 (430)
T ss_dssp TTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECS
T ss_pred CCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECC
Confidence 9999999999876 46667778889999999999987 788999999999999997 456778888999999999999
Q ss_pred CCC-eEEEEecCCeEEEEeCCCC--------------ceeeeeecCCCCCeEEEEECCCCC-EEEEEeCCCeEEEEeC
Q psy4391 164 DGS-LIVSSSYDGLCRIWDTASG--------------QCLKTLIDDDNPPVSFVKFSPNGK-YILAATLDNTLKLWDS 225 (231)
Q Consensus 164 ~~~-~l~~~~~dg~i~v~d~~~~--------------~~~~~~~~~~~~~i~~~~~s~~g~-~l~~~s~d~~v~vwd~ 225 (231)
+++ ++++++.||.|++||+... +.+.. ...+...+..++|+|+++ +|++++.||.|+||+.
T Consensus 332 ~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~ 408 (430)
T 2xyi_A 332 HNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFI-HGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQM 408 (430)
T ss_dssp SCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEE-CCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEE
T ss_pred CCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEE-cCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEc
Confidence 986 6889999999999999762 22222 234556799999999999 8999999999999996
No 84
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=4.5e-32 Score=212.17 Aligned_cols=197 Identities=20% Similarity=0.290 Sum_probs=167.4
Q ss_pred ccccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCC-EEEEecCCCcEEEEeCCC---
Q psy4391 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR-LLVSGSDDKTLKIWELSS--- 100 (231)
Q Consensus 25 ~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~~g~i~~~d~~~--- 100 (231)
+|...|.+++|+|++++|++++.||.|++||. +++....+..|...|.+++|+|+++ ++++++.|+.|++||+.+
T Consensus 161 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~ 239 (383)
T 3ei3_B 161 SWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKD 239 (383)
T ss_dssp CSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCS
T ss_pred CCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCc
Confidence 34578999999999999999999999999998 5677788888999999999999998 899999999999999987
Q ss_pred -ceeeeeecCCCcceEEEEECC-CCCEEEEeecCCcEEEEECCCCceeeeccCCC-----------------CCeEEEEE
Q psy4391 101 -GKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVRTGKCLKTLPAHS-----------------DPVSAVHF 161 (231)
Q Consensus 101 -~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~-----------------~~v~~~~~ 161 (231)
+..+..+ .|...+.+++|+| ++.++++++.|+.|++||+++++....+..|. +.+..++|
T Consensus 240 ~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 318 (383)
T 3ei3_B 240 KNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGR 318 (383)
T ss_dssp TTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEEC
T ss_pred ccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEe
Confidence 5555555 5788999999999 99999999999999999999887655544321 23445667
Q ss_pred cCCCCeEEEEecCCeEEEEeCCCCceeeeeecC-CCCCeEEEEECCCCCEEEEEeCCCeEEEEeCC
Q psy4391 162 NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD-DNPPVSFVKFSPNGKYILAATLDNTLKLWDSY 226 (231)
Q Consensus 162 ~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~-~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~~ 226 (231)
+|++++ +++.||.|++||+.+++.+..+... +...+..++|+|+|++|++++ |+.|++||..
T Consensus 319 s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~ 381 (383)
T 3ei3_B 319 YPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GFNILIWNRE 381 (383)
T ss_dssp BCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TTEEEEEECC
T ss_pred cCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec-CCcEEEEecC
Confidence 777776 7788999999999999988877653 355677789999999999997 9999999964
No 85
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.9e-31 Score=210.00 Aligned_cols=206 Identities=27% Similarity=0.446 Sum_probs=178.5
Q ss_pred eEEeecccccceEEEEECCCCCEEEEEeCCCcEEEeecC-CCcEEEEEecccccEEEEEECCCCCEEEEecCCCcEEEEe
Q psy4391 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY-DGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWE 97 (231)
Q Consensus 19 ~~~~~~~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d 97 (231)
....+.+|...|.+++| +++.+++++.||.|++||.. .......+.+|...+.+++|+|+++++++++.|+.|++||
T Consensus 168 ~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd 245 (401)
T 4aez_A 168 KLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWD 245 (401)
T ss_dssp EEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred EEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEcc
Confidence 33456689999999999 56799999999999999998 4566777888999999999999999999999999999999
Q ss_pred CCCceeeeeecCCCcceEEEEECCCC-CEEEEee--cCCcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeEEEE--e
Q psy4391 98 LSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSGS--FDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSS--S 172 (231)
Q Consensus 98 ~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~--~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~--~ 172 (231)
+.+++....+..|...+.+++|+|++ .++++++ .|+.|++||+++++.+..+. +...+.+++|+|++++++++ +
T Consensus 246 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~ 324 (401)
T 4aez_A 246 ARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD-AGSQVTSLIWSPHSKEIMSTHGF 324 (401)
T ss_dssp TTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECT
T ss_pred CCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEEECCCCCeEEEEeec
Confidence 99998888888899999999999976 5666654 79999999999998887775 56789999999999999984 4
Q ss_pred cCCeEEEEeCCCCceeeee-ecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCC
Q psy4391 173 YDGLCRIWDTASGQCLKTL-IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSYP 227 (231)
Q Consensus 173 ~dg~i~v~d~~~~~~~~~~-~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~~~ 227 (231)
.||.|++||+.+++..... ...+...+..++|+|+|++|++++.||.|++||...
T Consensus 325 ~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~ 380 (401)
T 4aez_A 325 PDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYD 380 (401)
T ss_dssp TTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC
T ss_pred CCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCC
Confidence 8999999999987655443 234566789999999999999999999999999744
No 86
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=6.3e-32 Score=214.68 Aligned_cols=205 Identities=21% Similarity=0.385 Sum_probs=175.0
Q ss_pred EeecccccceEEEEECCC-CCEEEEEeCCCcEEEeecCC----------CcEEEEEecccccEEEEEECCCCC-EEEEec
Q psy4391 21 FTLAGHTKAVSSVKFSPN-GEWLASSSADKLIKIWGAYD----------GKFEKTISGHKLGISDVAWSSDSR-LLVSGS 88 (231)
Q Consensus 21 ~~~~~h~~~i~~~~~~~~-~~~l~~~~~dg~i~i~~~~~----------~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~ 88 (231)
.....|.+.|++++|+|+ +.+|++++.+|.|++|+... ......+.+|...+.+++|+|++. +|++++
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 201 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSAS 201 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEEC
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEe
Confidence 345579999999999997 67899999999999999875 456667788888999999999988 999999
Q ss_pred CCCcEEEEeCCCcee-------eeeecCCCcceEEEEECC-CCCEEEEeecCCcEEEEECCCC---ceeeeccCCCCCeE
Q psy4391 89 DDKTLKIWELSSGKC-------LKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVRTG---KCLKTLPAHSDPVS 157 (231)
Q Consensus 89 ~~g~i~~~d~~~~~~-------~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~v~d~~~~---~~~~~~~~~~~~v~ 157 (231)
.||.|++|++.++.. ...+..|...+.+++|+| ++.++++++.|+.|++||++++ +.+..+..|...|.
T Consensus 202 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~ 281 (430)
T 2xyi_A 202 DDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVN 281 (430)
T ss_dssp TTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEE
T ss_pred CCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeE
Confidence 999999999987321 345667888999999999 6789999999999999999987 45666778899999
Q ss_pred EEEEcCCCC-eEEEEecCCeEEEEeCCCC-ceeeeeecCCCCCeEEEEECCCCC-EEEEEeCCCeEEEEeCC
Q psy4391 158 AVHFNRDGS-LIVSSSYDGLCRIWDTASG-QCLKTLIDDDNPPVSFVKFSPNGK-YILAATLDNTLKLWDSY 226 (231)
Q Consensus 158 ~~~~~~~~~-~l~~~~~dg~i~v~d~~~~-~~~~~~~~~~~~~i~~~~~s~~g~-~l~~~s~d~~v~vwd~~ 226 (231)
+++|+|++. ++++|+.||.|++||+++. +.+..+ ..+...+..++|+|+++ +|++++.||.|+|||..
T Consensus 282 ~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~-~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~ 352 (430)
T 2xyi_A 282 CLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF-ESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLS 352 (430)
T ss_dssp EEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEE-ECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGG
T ss_pred EEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEe-ecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCC
Confidence 999999987 5889999999999999984 334444 34567899999999995 68999999999999964
No 87
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=1.2e-31 Score=227.77 Aligned_cols=208 Identities=27% Similarity=0.479 Sum_probs=187.4
Q ss_pred eEEeecccccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEecCCCcEEEEeC
Q psy4391 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWEL 98 (231)
Q Consensus 19 ~~~~~~~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~ 98 (231)
...++.+|...|.+++|+|++++|++++.||.|++|+..+++....+.+|...+.+++|+|++++|++++.||.|++||+
T Consensus 47 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~ 126 (814)
T 3mkq_A 47 EVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNW 126 (814)
T ss_dssp EEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEG
T ss_pred eEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEEC
Confidence 34556689999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCc-eeeeeecCCCcceEEEEECC-CCCEEEEeecCCcEEEEECCCCceeeeccCCC-CCeEEEEEcC--CCCeEEEEec
Q psy4391 99 SSG-KCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVRTGKCLKTLPAHS-DPVSAVHFNR--DGSLIVSSSY 173 (231)
Q Consensus 99 ~~~-~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~-~~v~~~~~~~--~~~~l~~~~~ 173 (231)
.++ .....+..|...+.+++|+| ++..+++++.|+.|++||++.+.....+..+. ..+..++|+| ++.++++++.
T Consensus 127 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~ 206 (814)
T 3mkq_A 127 ENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASD 206 (814)
T ss_dssp GGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECT
T ss_pred CCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeC
Confidence 886 66777888889999999999 88999999999999999998887766665544 7899999999 9999999999
Q ss_pred CCeEEEEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCC
Q psy4391 174 DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSYP 227 (231)
Q Consensus 174 dg~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~~~ 227 (231)
||.|++||+.+++.+..+.. +...+..++|+|+|++|++++.||.|++||...
T Consensus 207 dg~i~~~d~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~ 259 (814)
T 3mkq_A 207 DLTIKIWDYQTKSCVATLEG-HMSNVSFAVFHPTLPIIISGSEDGTLKIWNSST 259 (814)
T ss_dssp TSEEEEEETTTTEEEEEEEC-CSSCEEEEEECSSSSEEEEEETTSCEEEEETTT
T ss_pred CCEEEEEECCCCcEEEEEcC-CCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 99999999999887776643 456799999999999999999999999999743
No 88
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=7e-31 Score=206.23 Aligned_cols=202 Identities=24% Similarity=0.468 Sum_probs=172.8
Q ss_pred ccccceEEEEECC-CCCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCC---CCEEEEecCCCcEEEEeCCC
Q psy4391 25 GHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD---SRLLVSGSDDKTLKIWELSS 100 (231)
Q Consensus 25 ~h~~~i~~~~~~~-~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~~g~i~~~d~~~ 100 (231)
+|...|.+++|+| +++++++++.||.|++|+..++.....+. +...+..+.|.|. +.++++++.++.|++||+.+
T Consensus 97 ~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~ 175 (408)
T 4a11_B 97 VHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKS 175 (408)
T ss_dssp CCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSS
T ss_pred cCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCC
Confidence 5899999999999 77899999999999999999887776665 5567889999884 45899999999999999999
Q ss_pred ceeeeeecCCCcceEEEEECCCCC-EEEEeecCCcEEEEECCCCc-eeeec---------------cCCCCCeEEEEEcC
Q psy4391 101 GKCLKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVRTGK-CLKTL---------------PAHSDPVSAVHFNR 163 (231)
Q Consensus 101 ~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~-~~~~~---------------~~~~~~v~~~~~~~ 163 (231)
++....+..|...+.+++|+|++. ++++++.|+.|++||++.+. .+..+ ..|...|.+++|+|
T Consensus 176 ~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 255 (408)
T 4a11_B 176 GSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTS 255 (408)
T ss_dssp SCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECT
T ss_pred cceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcC
Confidence 998888998999999999999998 58999999999999998765 22222 46778999999999
Q ss_pred CCCeEEEEecCCeEEEEeCCCCceeee----------------------------------------------eecCCCC
Q psy4391 164 DGSLIVSSSYDGLCRIWDTASGQCLKT----------------------------------------------LIDDDNP 197 (231)
Q Consensus 164 ~~~~l~~~~~dg~i~v~d~~~~~~~~~----------------------------------------------~~~~~~~ 197 (231)
+++++++++.||.|++||+.+++.... ....+..
T Consensus 256 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~ 335 (408)
T 4a11_B 256 DGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYK 335 (408)
T ss_dssp TSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSS
T ss_pred CCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCC
Confidence 999999999999999999987543211 1123556
Q ss_pred CeEEEEECCCCCEEEEEeCCCeEEEEeCCC
Q psy4391 198 PVSFVKFSPNGKYILAATLDNTLKLWDSYP 227 (231)
Q Consensus 198 ~i~~~~~s~~g~~l~~~s~d~~v~vwd~~~ 227 (231)
.|..++|+|++++|++++.||.|++||...
T Consensus 336 ~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~ 365 (408)
T 4a11_B 336 TVDCCVFQSNFQELYSGSRDCNILAWVPSL 365 (408)
T ss_dssp CEEEEEEETTTTEEEEEETTSCEEEEEECC
T ss_pred eEEEEEEcCCCCEEEEECCCCeEEEEeCCC
Confidence 789999999999999999999999999743
No 89
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=2.7e-31 Score=218.94 Aligned_cols=205 Identities=23% Similarity=0.377 Sum_probs=184.4
Q ss_pred eEEeecccccc-eEEEEECC--CCCEEEEEeCCCcEEEeecCCC--------cEEEEEecccccEEEEEECCCCCEEEEe
Q psy4391 19 LKFTLAGHTKA-VSSVKFSP--NGEWLASSSADKLIKIWGAYDG--------KFEKTISGHKLGISDVAWSSDSRLLVSG 87 (231)
Q Consensus 19 ~~~~~~~h~~~-i~~~~~~~--~~~~l~~~~~dg~i~i~~~~~~--------~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 87 (231)
....+.+|... |.+++|+| ++++|++++.||.|++|+..++ .....+..|...+.+++|+|++++++++
T Consensus 55 ~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 134 (615)
T 1pgu_A 55 PVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVV 134 (615)
T ss_dssp SEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred cceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEe
Confidence 34566789999 99999999 9999999999999999999744 5566677788899999999999999999
Q ss_pred cCC----CcEEEEeCCCceeeeeecCCCcceEEEEECCCCC-EEEEeecCCcEEEEECCCCceeeeccCCCC---CeEEE
Q psy4391 88 SDD----KTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVRTGKCLKTLPAHSD---PVSAV 159 (231)
Q Consensus 88 ~~~----g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~---~v~~~ 159 (231)
+.+ +.|++|| .++....+..|...+.++.|+|++. .+++++.|+.|++||+++++.+..+..|.. .|.++
T Consensus 135 ~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~ 212 (615)
T 1pgu_A 135 GEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDV 212 (615)
T ss_dssp ECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEE
T ss_pred ccCCCCccEEEEEE--CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEE
Confidence 887 6888888 5667778888999999999999998 899999999999999999999999998988 99999
Q ss_pred EEcCC-CCeEEEEecCCeEEEEeCCCCceeeeeec---CCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCC
Q psy4391 160 HFNRD-GSLIVSSSYDGLCRIWDTASGQCLKTLID---DDNPPVSFVKFSPNGKYILAATLDNTLKLWDSY 226 (231)
Q Consensus 160 ~~~~~-~~~l~~~~~dg~i~v~d~~~~~~~~~~~~---~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~~ 226 (231)
+|+|+ ++++++++.||.|++||+.+++.+..+.. .+...+..++|+ ++++|++++.|+.|++||..
T Consensus 213 ~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~ 282 (615)
T 1pgu_A 213 EFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVT 282 (615)
T ss_dssp EECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETT
T ss_pred EECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECC
Confidence 99999 99999999999999999999988877744 567789999999 99999999999999999974
No 90
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=9.6e-31 Score=209.43 Aligned_cols=203 Identities=29% Similarity=0.585 Sum_probs=178.9
Q ss_pred eEEeecccccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEEC--CCCCEEEEecCCCcEEEE
Q psy4391 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS--SDSRLLVSGSDDKTLKIW 96 (231)
Q Consensus 19 ~~~~~~~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~~g~i~~~ 96 (231)
....+.+|.+.|.+++|++++ .+++|+.||.|++||..+++....+.+|...|.+++|+ +++.++++++.|+.|++|
T Consensus 154 ~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vw 232 (464)
T 3v7d_B 154 FLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVW 232 (464)
T ss_dssp EEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEE
T ss_pred EEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEe
Confidence 445677899999999999988 89999999999999999999888999999999999998 577899999999999999
Q ss_pred eCCCcee-----------------------eeeecCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeeccCCC
Q psy4391 97 ELSSGKC-----------------------LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHS 153 (231)
Q Consensus 97 d~~~~~~-----------------------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~ 153 (231)
|+.++.. ...+.+|...+.++ +++++++++++.|+.|++||+++++.+..+..|.
T Consensus 233 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~ 310 (464)
T 3v7d_B 233 KLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHT 310 (464)
T ss_dssp ECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCS
T ss_pred eCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCC
Confidence 9987542 33455666666654 6788999999999999999999999999999999
Q ss_pred CCeEEEEEcCCCCeEEEEecCCeEEEEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCC
Q psy4391 154 DPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSYP 227 (231)
Q Consensus 154 ~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~~~ 227 (231)
..+.+++|+|+++++++++.||.|++||+.+++.+..+.. +...+..++|+ +++|++++.||.|++||...
T Consensus 311 ~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~-h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~ 381 (464)
T 3v7d_B 311 DRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQG-HTALVGLLRLS--DKFLVSAAADGSIRGWDAND 381 (464)
T ss_dssp SCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEEC--SSEEEEEETTSEEEEEETTT
T ss_pred CCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeC-CCCcEEEEEEc--CCEEEEEeCCCcEEEEECCC
Confidence 9999999999999999999999999999999988777654 55678889987 58999999999999999743
No 91
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=2.2e-30 Score=197.24 Aligned_cols=208 Identities=24% Similarity=0.489 Sum_probs=170.0
Q ss_pred EeecccccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEe----------------------------------
Q psy4391 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS---------------------------------- 66 (231)
Q Consensus 21 ~~~~~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~---------------------------------- 66 (231)
+.+.+|...|++++|+|++++|++|+.||.|++|+..+++....+.
T Consensus 61 ~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~ 140 (318)
T 4ggc_A 61 LQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAE 140 (318)
T ss_dssp EECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSS
T ss_pred EEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCc
Confidence 4456788899999999999999999999999999998776544333
Q ss_pred -------cccccEEEEEECCCCCEEEEecCCCcEEEEeCCCcee----eeeecCCCcceEEEEECCCCCEE---EEeecC
Q psy4391 67 -------GHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKC----LKTLKGHSNYVFCCNFNPQSNLI---VSGSFD 132 (231)
Q Consensus 67 -------~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l---~~~~~d 132 (231)
+|...+..+.+.++++++++++.|+.|++||+.+++. ......+...+..+.+.|++..+ ++++.+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 220 (318)
T 4ggc_A 141 HHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSD 220 (318)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTT
T ss_pred eeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCC
Confidence 2344567788899999999999999999999987643 23344566778899999876533 456778
Q ss_pred CcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeEEEEe--cCCeEEEEeCCCCceeeeeecCCCCCeEEEEECCCCCE
Q psy4391 133 ESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSS--YDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKY 210 (231)
Q Consensus 133 ~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~dg~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~ 210 (231)
+.|++||.+........ .+...+..+.|+|++..+++++ .|+.|++||+.+++.+..+.. +...|.+++|+|+|++
T Consensus 221 ~~i~lwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~g-H~~~V~~l~~spdg~~ 298 (318)
T 4ggc_A 221 RHIRIWNVCSGACLSAV-DAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKG-HTSRVLSLTMSPDGAT 298 (318)
T ss_dssp CEEEEEETTTCCEEEEE-ECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSSC
T ss_pred CEEEEEecccccccccc-cceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcC-CCCCEEEEEEcCCCCE
Confidence 99999999988765554 4566899999999999887654 789999999999998887654 5678999999999999
Q ss_pred EEEEeCCCeEEEEeCCCCCC
Q psy4391 211 ILAATLDNTLKLWDSYPCLP 230 (231)
Q Consensus 211 l~~~s~d~~v~vwd~~~~~~ 230 (231)
|++++.||.|+|||.++.-|
T Consensus 299 l~S~s~D~~v~iWd~~~~dP 318 (318)
T 4ggc_A 299 VASAAADETLRLWRCFELDP 318 (318)
T ss_dssp EEEEETTTEEEEECCSCCCC
T ss_pred EEEEecCCeEEEEECCCCCC
Confidence 99999999999999877654
No 92
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=3.9e-31 Score=205.19 Aligned_cols=201 Identities=16% Similarity=0.228 Sum_probs=160.1
Q ss_pred eecccccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEE-EEecCCCcEEEEeCCC
Q psy4391 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLL-VSGSDDKTLKIWELSS 100 (231)
Q Consensus 22 ~~~~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~~g~i~~~d~~~ 100 (231)
+...|...|.+++|+|+|++|++|+.+| +++|+..+........ ...+..+.+.++++.+ ++++.++.|++||..+
T Consensus 14 ~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~ 90 (355)
T 3vu4_A 14 PENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQE--MRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVK 90 (355)
T ss_dssp -----CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEE--CSCCCEEEECTTSSEEEEECSSTTEEEEEETTT
T ss_pred ccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeee--cCCeEEEEEcCCCCEEEEEECCccEEEEEECCC
Confidence 4467999999999999999999988665 7899987665443332 2246677888888877 5677889999999999
Q ss_pred ceeeeeecCCCcceEEEEECCCC-----------------------------------CEEEE--eecCCcEEEEECCCC
Q psy4391 101 GKCLKTLKGHSNYVFCCNFNPQS-----------------------------------NLIVS--GSFDESVRIWDVRTG 143 (231)
Q Consensus 101 ~~~~~~~~~~~~~v~~~~~~~~~-----------------------------------~~l~~--~~~d~~i~v~d~~~~ 143 (231)
++.+..+. +...+.++.++++. ..++. |+.+|.|++||++++
T Consensus 91 ~~~~~~~~-~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~ 169 (355)
T 3vu4_A 91 KQDVSRIK-VDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIHITKLQSS 169 (355)
T ss_dssp TEEEEEEE-CSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTCEEEEECCC-
T ss_pred CcEEEEEE-CCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcEEEEEECCCC
Confidence 98877776 44567777776542 23444 578899999999876
Q ss_pred c----------------eeeeccCCCCCeEEEEEcCCCCeEEEEecCCe-EEEEeCCCCceeeeeecC-CCCCeEEEEEC
Q psy4391 144 K----------------CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGL-CRIWDTASGQCLKTLIDD-DNPPVSFVKFS 205 (231)
Q Consensus 144 ~----------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~-i~v~d~~~~~~~~~~~~~-~~~~i~~~~~s 205 (231)
. .+..+..|.++|.+++|+|++++|++++.|+. |++||+.+++.+..+... +...|..++|+
T Consensus 170 ~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s 249 (355)
T 3vu4_A 170 GSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWS 249 (355)
T ss_dssp -----------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEEC
T ss_pred CccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEEC
Confidence 5 25678899999999999999999999999998 999999999988888733 67789999999
Q ss_pred CCCCEEEEEeCCCeEEEEeCC
Q psy4391 206 PNGKYILAATLDNTLKLWDSY 226 (231)
Q Consensus 206 ~~g~~l~~~s~d~~v~vwd~~ 226 (231)
|+|++|++++.|+.|++||..
T Consensus 250 ~~~~~l~s~s~d~~v~iw~~~ 270 (355)
T 3vu4_A 250 TDGSKLAVVSDKWTLHVFEIF 270 (355)
T ss_dssp TTSCEEEEEETTCEEEEEESS
T ss_pred CCCCEEEEEECCCEEEEEEcc
Confidence 999999999999999999963
No 93
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.2e-32 Score=227.13 Aligned_cols=209 Identities=27% Similarity=0.377 Sum_probs=179.5
Q ss_pred eeEEeecccccceEEEEECCC--CCEEEEEeCCCcEEEeecCCCc--EEEEEecccccEEEEEECCC--CCEEEEecCCC
Q psy4391 18 VLKFTLAGHTKAVSSVKFSPN--GEWLASSSADKLIKIWGAYDGK--FEKTISGHKLGISDVAWSSD--SRLLVSGSDDK 91 (231)
Q Consensus 18 ~~~~~~~~h~~~i~~~~~~~~--~~~l~~~~~dg~i~i~~~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~~g 91 (231)
....++.+|.+.|.+++|+++ +++|++|+.||.|++|+..++. ....+..|...|.+++|+|+ ++.+++++.||
T Consensus 44 ~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg 123 (753)
T 3jro_A 44 KLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDG 123 (753)
T ss_dssp EEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS
T ss_pred ccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCC
Confidence 344567789999999999988 9999999999999999998876 55667788899999999999 99999999999
Q ss_pred cEEEEeCCCce--eeeeecCCCcceEEEEECC-------------CCCEEEEeecCCcEEEEECCCC----ceeeeccCC
Q psy4391 92 TLKIWELSSGK--CLKTLKGHSNYVFCCNFNP-------------QSNLIVSGSFDESVRIWDVRTG----KCLKTLPAH 152 (231)
Q Consensus 92 ~i~~~d~~~~~--~~~~~~~~~~~v~~~~~~~-------------~~~~l~~~~~d~~i~v~d~~~~----~~~~~~~~~ 152 (231)
.|++||+.++. ....+..|...+.++.|+| ++..+++++.||.|++||++++ .....+..|
T Consensus 124 ~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h 203 (753)
T 3jro_A 124 KVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGH 203 (753)
T ss_dssp EEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCC
T ss_pred cEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCC
Confidence 99999998763 3445567888999999999 5899999999999999999877 445667789
Q ss_pred CCCeEEEEEcCC---CCeEEEEecCCeEEEEeCCCCceee--ee--ecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeC
Q psy4391 153 SDPVSAVHFNRD---GSLIVSSSYDGLCRIWDTASGQCLK--TL--IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225 (231)
Q Consensus 153 ~~~v~~~~~~~~---~~~l~~~~~dg~i~v~d~~~~~~~~--~~--~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~ 225 (231)
..+|.+++|+|+ +.++++++.||.|++||+.+++... .. ...+...+..++|+|+|++|++++.||.|++||.
T Consensus 204 ~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~ 283 (753)
T 3jro_A 204 SDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKE 283 (753)
T ss_dssp SSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBC
T ss_pred CCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEec
Confidence 999999999999 8999999999999999998764211 11 1234567888999999999999999999999997
Q ss_pred C
Q psy4391 226 Y 226 (231)
Q Consensus 226 ~ 226 (231)
.
T Consensus 284 ~ 284 (753)
T 3jro_A 284 N 284 (753)
T ss_dssp C
T ss_pred C
Confidence 5
No 94
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.4e-32 Score=215.68 Aligned_cols=202 Identities=17% Similarity=0.299 Sum_probs=169.7
Q ss_pred ccccceEEEEECCCCCEEEEEeCCCcEEEeecC---CCcEEEEEec------------ccccEEEEE--ECCCCCEEEEe
Q psy4391 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY---DGKFEKTISG------------HKLGISDVA--WSSDSRLLVSG 87 (231)
Q Consensus 25 ~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~---~~~~~~~~~~------------~~~~v~~~~--~~~~~~~l~~~ 87 (231)
+|...|.+++|+|++++|++++.||.|++|++. +++....... +...+.++. +++++.+++++
T Consensus 109 ~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 188 (437)
T 3gre_A 109 DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVAL 188 (437)
T ss_dssp ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEE
T ss_pred cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEE
Confidence 589999999999999999999999999999984 4444333322 223345554 56789999999
Q ss_pred cCCCcEEEEeCCCceeeeeecC--CCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeecc-CCCCCeEEEEEc--
Q psy4391 88 SDDKTLKIWELSSGKCLKTLKG--HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLP-AHSDPVSAVHFN-- 162 (231)
Q Consensus 88 ~~~g~i~~~d~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~~v~~~~~~-- 162 (231)
+.|+.|++||+++++.+..+.. |...+.+++|+|++.++++++.|+.|++||+++++.+..+. .|..+|.+++|+
T Consensus 189 ~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~ 268 (437)
T 3gre_A 189 TNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQF 268 (437)
T ss_dssp ETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTT
T ss_pred eCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccc
Confidence 9999999999999998888887 77899999999999999999999999999999998888775 677789999665
Q ss_pred --CCCCeEEEEecCCeEEEEeCCCCceeeeeecC-------------------------CCCCeEEEEECCCCCEEEEEe
Q psy4391 163 --RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD-------------------------DNPPVSFVKFSPNGKYILAAT 215 (231)
Q Consensus 163 --~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~-------------------------~~~~i~~~~~s~~g~~l~~~s 215 (231)
|++.++++++.||.|++||+.+++.+..+..+ +...|.+++|+ ++++|++++
T Consensus 269 ~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~ 347 (437)
T 3gre_A 269 YGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDE 347 (437)
T ss_dssp TCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEG
T ss_pred cCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecC
Confidence 46779999999999999999998877766532 33447788999 779999999
Q ss_pred CCCeEEEEeCCC
Q psy4391 216 LDNTLKLWDSYP 227 (231)
Q Consensus 216 ~d~~v~vwd~~~ 227 (231)
.|+.|++||...
T Consensus 348 ~d~~i~~wd~~~ 359 (437)
T 3gre_A 348 ATSSIVMFSLNE 359 (437)
T ss_dssp GGTEEEEEETTC
T ss_pred CCCeEEEEECCC
Confidence 999999999643
No 95
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.7e-31 Score=205.37 Aligned_cols=201 Identities=9% Similarity=0.017 Sum_probs=174.0
Q ss_pred ecccccceEEEEECCCCCEEEEEeCCCcEEEeecCCCc---EEEEEecccccEEEEEECCCCC-EEEEecCCCcEEEEeC
Q psy4391 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK---FEKTISGHKLGISDVAWSSDSR-LLVSGSDDKTLKIWEL 98 (231)
Q Consensus 23 ~~~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~~g~i~~~d~ 98 (231)
..+|.+.|.+++|+|++++|++++.||.|++|+..++. ....+..|...|.+++|+|+++ ++++++.||.|++||+
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~ 86 (342)
T 1yfq_A 7 EQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDL 86 (342)
T ss_dssp SSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECS
T ss_pred ccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEe
Confidence 35799999999999999999999999999999997766 2444557888999999999999 9999999999999999
Q ss_pred -CCceeeeeecC--CCcceEEEEECCCCCEEEEeecCCcEEEEECCC---------CceeeeccCCCCCeEEEEEcCCCC
Q psy4391 99 -SSGKCLKTLKG--HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT---------GKCLKTLPAHSDPVSAVHFNRDGS 166 (231)
Q Consensus 99 -~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~---------~~~~~~~~~~~~~v~~~~~~~~~~ 166 (231)
.+++. ..+.. |...+.+++|+| +..+++++.|+.|++||+++ ++.+..+. +...+.+++|+|++
T Consensus 87 ~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~- 162 (342)
T 1yfq_A 87 IGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR- 162 (342)
T ss_dssp SSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE-
T ss_pred ccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCCc-
Confidence 87654 56777 889999999999 99999999999999999987 66666665 78899999999987
Q ss_pred eEEEEecCCeEEEEeCCC-Cce-eeeeecCCCCCeEEEEECC-CCCEEEEEeCCCeEEEEeCCCC
Q psy4391 167 LIVSSSYDGLCRIWDTAS-GQC-LKTLIDDDNPPVSFVKFSP-NGKYILAATLDNTLKLWDSYPC 228 (231)
Q Consensus 167 ~l~~~~~dg~i~v~d~~~-~~~-~~~~~~~~~~~i~~~~~s~-~g~~l~~~s~d~~v~vwd~~~~ 228 (231)
+++++.|+.|++||+++ +.. .......+...+..++|+| +++++++++.||.|++||....
T Consensus 163 -l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~ 226 (342)
T 1yfq_A 163 -LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQ 226 (342)
T ss_dssp -EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTT
T ss_pred -EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCC
Confidence 89999999999999988 543 2333445566899999999 9999999999999999997543
No 96
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.1e-31 Score=207.33 Aligned_cols=201 Identities=18% Similarity=0.332 Sum_probs=171.9
Q ss_pred ccccceEEEEECCC---CCEEEEEeCCCcEEEeecCCCc-EEEEEecccccEEEEE------ECCCCCEEEEecCCCcEE
Q psy4391 25 GHTKAVSSVKFSPN---GEWLASSSADKLIKIWGAYDGK-FEKTISGHKLGISDVA------WSSDSRLLVSGSDDKTLK 94 (231)
Q Consensus 25 ~h~~~i~~~~~~~~---~~~l~~~~~dg~i~i~~~~~~~-~~~~~~~~~~~v~~~~------~~~~~~~l~~~~~~g~i~ 94 (231)
+|...|.+++|+|+ +++|++++.||.|++|+..++. ....+.+|...+.++. |+|+++.+++++.|+.|+
T Consensus 63 ~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~ 142 (357)
T 3i2n_A 63 EKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVK 142 (357)
T ss_dssp EESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEE
T ss_pred cccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEE
Confidence 78899999999998 6999999999999999998877 7778888999999995 468999999999999999
Q ss_pred EEeCCCce-eeeeecCCCc----ceEEEE----ECCCCCEEEEeecCCcEEEEECCCCceeeeccCCCCCeEEEEEcC--
Q psy4391 95 IWELSSGK-CLKTLKGHSN----YVFCCN----FNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNR-- 163 (231)
Q Consensus 95 ~~d~~~~~-~~~~~~~~~~----~v~~~~----~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~-- 163 (231)
+||+.+++ ....+..+.. .+.++. |+|+++++++++.|+.|++||+++++.... ..+...+.+++|+|
T Consensus 143 vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~ 221 (357)
T 3i2n_A 143 VWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE-TNIKNGVCSLEFDRKD 221 (357)
T ss_dssp EECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE-EECSSCEEEEEESCSS
T ss_pred EEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeee-cCCCCceEEEEcCCCC
Confidence 99999876 5666654433 677777 789999999999999999999999886444 56778999999999
Q ss_pred -CCCeEEEEecCCeEEEEeCCCCceeeeee----cCCCCCeEEEEECCCCC-EEEEEeCCCeEEEEeCC
Q psy4391 164 -DGSLIVSSSYDGLCRIWDTASGQCLKTLI----DDDNPPVSFVKFSPNGK-YILAATLDNTLKLWDSY 226 (231)
Q Consensus 164 -~~~~l~~~~~dg~i~v~d~~~~~~~~~~~----~~~~~~i~~~~~s~~g~-~l~~~s~d~~v~vwd~~ 226 (231)
++.++++++.||.|++||+++++....+. ..+...+..++|+|+++ +|++++.||.|++||..
T Consensus 222 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 290 (357)
T 3i2n_A 222 ISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYE 290 (357)
T ss_dssp SSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEE
T ss_pred CCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecC
Confidence 99999999999999999998766544432 25667899999999998 89999999999999963
No 97
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=7.8e-32 Score=212.23 Aligned_cols=198 Identities=25% Similarity=0.456 Sum_probs=171.5
Q ss_pred ceEEEEECCCCCEEE-EEeCCCcEEEeecCCCc----EEEEEecccccEEEEEECC-CCCEEEEecCCCcEEEEeCCCc-
Q psy4391 29 AVSSVKFSPNGEWLA-SSSADKLIKIWGAYDGK----FEKTISGHKLGISDVAWSS-DSRLLVSGSDDKTLKIWELSSG- 101 (231)
Q Consensus 29 ~i~~~~~~~~~~~l~-~~~~dg~i~i~~~~~~~----~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~g~i~~~d~~~~- 101 (231)
....++++|+...++ +++.+|.|++|+..... ....+.+|...|.+++|+| ++++|++++.||.|++||+.++
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~ 115 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGG 115 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTC
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCC
Confidence 345688888776544 57889999999985532 2334667889999999999 8999999999999999999987
Q ss_pred ------eeeeeecCCCcceEEEEECCCC-CEEEEeecCCcEEEEECCCCceeeec--cCCCCCeEEEEEcCCCCeEEEEe
Q psy4391 102 ------KCLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVRTGKCLKTL--PAHSDPVSAVHFNRDGSLIVSSS 172 (231)
Q Consensus 102 ------~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~v~d~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~ 172 (231)
+....+.+|...+.+++|+|++ +++++++.|+.|++||+++++.+..+ ..|...|.+++|+|++++|++++
T Consensus 116 ~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 195 (402)
T 2aq5_A 116 LVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSC 195 (402)
T ss_dssp CSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEE
T ss_pred CccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEe
Confidence 5667788899999999999998 69999999999999999999988888 78999999999999999999999
Q ss_pred cCCeEEEEeCCCCceeeee-ecCCCCCeEEEEECCCCCEEEEE---eCCCeEEEEeCC
Q psy4391 173 YDGLCRIWDTASGQCLKTL-IDDDNPPVSFVKFSPNGKYILAA---TLDNTLKLWDSY 226 (231)
Q Consensus 173 ~dg~i~v~d~~~~~~~~~~-~~~~~~~i~~~~~s~~g~~l~~~---s~d~~v~vwd~~ 226 (231)
.||.|++||+++++.+..+ ..+....+..++|+|+|++|+++ +.|+.|++||..
T Consensus 196 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~ 253 (402)
T 2aq5_A 196 RDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTK 253 (402)
T ss_dssp TTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETT
T ss_pred cCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCc
Confidence 9999999999999888777 34444447889999999999999 789999999974
No 98
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.3e-32 Score=221.38 Aligned_cols=204 Identities=16% Similarity=0.105 Sum_probs=168.0
Q ss_pred EeecccccceEEEEECCCCCEEEEEeCCCcEEEeecCCCc-EEEEEecccccEEEE--EECCCC-CEEEEecCCCcEEEE
Q psy4391 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-FEKTISGHKLGISDV--AWSSDS-RLLVSGSDDKTLKIW 96 (231)
Q Consensus 21 ~~~~~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~-~~~~~~~~~~~v~~~--~~~~~~-~~l~~~~~~g~i~~~ 96 (231)
.++.+|...|++++|+++ ..|++|+.||+|++||+.++. ....+.+|...|.++ .|+|++ .+|++++.|++|++|
T Consensus 260 ~~l~~h~~~v~sv~~s~~-~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklW 338 (524)
T 2j04_B 260 LTLSLADSLITTFDFLSP-TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIF 338 (524)
T ss_dssp EEECCTTTCEEEEEESSS-SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEE
T ss_pred EEEEcCCCCEEEEEecCC-CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEE
Confidence 356789999999999986 489999999999999998653 345577888999999 578887 889999999999999
Q ss_pred eCCCceeeeeecCCC--cceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeEEEEecC
Q psy4391 97 ELSSGKCLKTLKGHS--NYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 174 (231)
Q Consensus 97 d~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 174 (231)
|+++++....+.+|. ..+.+++|+|++..+++++.|+.|++||++++.++..+..|.+.|.+++|+|++++|++|+.|
T Consensus 339 D~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~D 418 (524)
T 2j04_B 339 NPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSAD 418 (524)
T ss_dssp CGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETT
T ss_pred ECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECC
Confidence 999877665555443 246789999999999999999999999999998878888899999999999999999999999
Q ss_pred CeEEEEeCCCCc--------------eeeee-----------------------------ecCCCCCeEEEEECCCCC--
Q psy4391 175 GLCRIWDTASGQ--------------CLKTL-----------------------------IDDDNPPVSFVKFSPNGK-- 209 (231)
Q Consensus 175 g~i~v~d~~~~~--------------~~~~~-----------------------------~~~~~~~i~~~~~s~~g~-- 209 (231)
|.|++||+.... .+..+ ...+...|.+++|+|+++
T Consensus 419 gtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~ 498 (524)
T 2j04_B 419 GSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGG 498 (524)
T ss_dssp TEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECCSTTTT
T ss_pred CEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCCCcc
Confidence 999999864210 00000 111334678899999964
Q ss_pred -EEEEEeCCCeEEEEeC
Q psy4391 210 -YILAATLDNTLKLWDS 225 (231)
Q Consensus 210 -~l~~~s~d~~v~vwd~ 225 (231)
++|+|+.||.|+||+.
T Consensus 499 ~~lAsg~~~g~vrlw~l 515 (524)
T 2j04_B 499 KCYAFSNSAGLLTLEYL 515 (524)
T ss_dssp TEEEEECTTSEEEEEEC
T ss_pred HHHHhhccCceEEEEEc
Confidence 9999999999999985
No 99
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.5e-30 Score=208.36 Aligned_cols=202 Identities=28% Similarity=0.606 Sum_probs=176.7
Q ss_pred eEEeecccccce-EEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEecCCCcEEEEe
Q psy4391 19 LKFTLAGHTKAV-SSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWE 97 (231)
Q Consensus 19 ~~~~~~~h~~~i-~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d 97 (231)
....+.+|...+ .++.+ ++++|++|+.||.|++||..+++....+.+|...|.+++|+|++ .+++++.||.|++||
T Consensus 113 ~~~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd 189 (464)
T 3v7d_B 113 QRTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWD 189 (464)
T ss_dssp EEEEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEE
T ss_pred ceEEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEE
Confidence 345677898875 66555 57899999999999999999999999999999999999999987 899999999999999
Q ss_pred CCCceeeeeecCCCcceEEEEEC--CCCCEEEEeecCCcEEEEECCCCce-----------------------eeeccCC
Q psy4391 98 LSSGKCLKTLKGHSNYVFCCNFN--PQSNLIVSGSFDESVRIWDVRTGKC-----------------------LKTLPAH 152 (231)
Q Consensus 98 ~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~d~~i~v~d~~~~~~-----------------------~~~~~~~ 152 (231)
+++++....+..|...+.+++++ +++.++++++.|+.|++||++++.. +..+..|
T Consensus 190 ~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (464)
T 3v7d_B 190 IKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGH 269 (464)
T ss_dssp TTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCC
T ss_pred CCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCc
Confidence 99999999999999999999988 5789999999999999999987653 3345567
Q ss_pred CCCeEEEEEcCCCCeEEEEecCCeEEEEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCC
Q psy4391 153 SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSY 226 (231)
Q Consensus 153 ~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~~ 226 (231)
...+.++ ++++.++++++.||.|++||+.+++.+..+. .+...+..++|+|++++|++++.||.|++||..
T Consensus 270 ~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~ 340 (464)
T 3v7d_B 270 MASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILS-GHTDRIYSTIYDHERKRCISASMDTTIRIWDLE 340 (464)
T ss_dssp SSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEEETTTTEEEEEETTSCEEEEETT
T ss_pred cceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEec-CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECC
Confidence 7777765 6788999999999999999999998877664 355679999999999999999999999999974
No 100
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.1e-30 Score=195.85 Aligned_cols=197 Identities=27% Similarity=0.441 Sum_probs=173.7
Q ss_pred EeecccccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECC-CCCEEEEecCCCcEEEEeCC
Q psy4391 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS-DSRLLVSGSDDKTLKIWELS 99 (231)
Q Consensus 21 ~~~~~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~g~i~~~d~~ 99 (231)
..+.+|...|.++.| +++++++++.||.|++|+ .+.....+..|...+..+.|.| +++.+++++.++.|++||.
T Consensus 98 ~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~- 172 (313)
T 3odt_A 98 YTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQN- 172 (313)
T ss_dssp CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEET-
T ss_pred cchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEec-
Confidence 445689999999999 678999999999999999 5667778888889999999988 8999999999999999994
Q ss_pred CceeeeeecC-CCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeEEEEecCCeEE
Q psy4391 100 SGKCLKTLKG-HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCR 178 (231)
Q Consensus 100 ~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 178 (231)
.+....+.. +...+.+++|+|++. +++++.|+.|++||+++++.+..+..|..++.+++|+|++ .+++++.||.|+
T Consensus 173 -~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~ 249 (313)
T 3odt_A 173 -DKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVR 249 (313)
T ss_dssp -TEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEE
T ss_pred -CceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEE
Confidence 455556665 788899999999988 9999999999999999999999999999999999999999 688999999999
Q ss_pred EEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCC
Q psy4391 179 IWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSYP 227 (231)
Q Consensus 179 v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~~~ 227 (231)
+||+.+++.+..+.. +..++..++|+|+++ +++++.||.|++||..+
T Consensus 250 iwd~~~~~~~~~~~~-~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~ 296 (313)
T 3odt_A 250 IWSKENGSLKQVITL-PAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEK 296 (313)
T ss_dssp EECTTTCCEEEEEEC-SSSCEEEEEECTTSC-EEEEETTSCEEEEESCG
T ss_pred EEECCCCceeEEEec-cCceEEEEEEccCCC-EEEEeCCCcEEEEeCCC
Confidence 999999988777654 455799999999998 56788999999999743
No 101
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.9e-30 Score=229.35 Aligned_cols=206 Identities=30% Similarity=0.529 Sum_probs=184.8
Q ss_pred eEEeecccccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECC--CCCEEEEecCCCcEEEE
Q psy4391 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS--DSRLLVSGSDDKTLKIW 96 (231)
Q Consensus 19 ~~~~~~~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~~g~i~~~ 96 (231)
...++.+|...|.+++|+|++++|++++.||.|++||..+++....+.+|...+.+++|+| ++..+++++.|+.|++|
T Consensus 649 ~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vw 728 (1249)
T 3sfz_A 649 KLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLW 728 (1249)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEE
T ss_pred EEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEE
Confidence 3456678999999999999999999999999999999999999999999999999999999 55688999999999999
Q ss_pred eCCCceeeeeecCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeec---------------------------
Q psy4391 97 ELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTL--------------------------- 149 (231)
Q Consensus 97 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~--------------------------- 149 (231)
|+.+++....+.+|...+.+++|+|+++.+++++.||.|++||+++++....+
T Consensus 729 d~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 808 (1249)
T 3sfz_A 729 DLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSA 808 (1249)
T ss_dssp ETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCT
T ss_pred ECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECC
Confidence 99999999999999999999999999999999999999999999776433221
Q ss_pred ----------------------------cCCCCCeEEEEEcCCCCeEEEEecCCeEEEEeCCCCceeeeeecCCCCCeEE
Q psy4391 150 ----------------------------PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 201 (231)
Q Consensus 150 ----------------------------~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~i~~ 201 (231)
..|...+.+++|+|++.++++++.||.|++||+.+++.+..+. .+...|..
T Consensus 809 dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~-~h~~~v~~ 887 (1249)
T 3sfz_A 809 DGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCR-GHLSWVHG 887 (1249)
T ss_dssp TSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEEC-CCSSCEEE
T ss_pred CCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecC-CCccceEE
Confidence 1456778899999999999999999999999999988776654 45667999
Q ss_pred EEECCCCCEEEEEeCCCeEEEEeC
Q psy4391 202 VKFSPNGKYILAATLDNTLKLWDS 225 (231)
Q Consensus 202 ~~~s~~g~~l~~~s~d~~v~vwd~ 225 (231)
++|+|+|++|++++.||.|++||.
T Consensus 888 v~~spdg~~l~s~s~dg~v~vw~~ 911 (1249)
T 3sfz_A 888 VMFSPDGSSFLTASDDQTIRVWET 911 (1249)
T ss_dssp EEECTTSSEEEEEETTSCEEEEEH
T ss_pred EEECCCCCEEEEEeCCCeEEEEEc
Confidence 999999999999999999999995
No 102
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.8e-31 Score=210.24 Aligned_cols=198 Identities=18% Similarity=0.172 Sum_probs=169.8
Q ss_pred cceEEEEECCCCCEEEEEeCCCcEEEeecCCCc---EEEEEecc------------------------------------
Q psy4391 28 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK---FEKTISGH------------------------------------ 68 (231)
Q Consensus 28 ~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~---~~~~~~~~------------------------------------ 68 (231)
.++.+++|+++|++|+++ .++.|++|+..+++ ....+..+
T Consensus 5 ~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDS 83 (450)
T ss_dssp CCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred ccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcc
Confidence 478899999999976665 57899999998887 44443321
Q ss_pred ------------------cccEEEEEECCCCCEE-EEecCCCcEEEEeCC--Cceeeeeec--CCCcceEEEEECCCCCE
Q psy4391 69 ------------------KLGISDVAWSSDSRLL-VSGSDDKTLKIWELS--SGKCLKTLK--GHSNYVFCCNFNPQSNL 125 (231)
Q Consensus 69 ------------------~~~v~~~~~~~~~~~l-~~~~~~g~i~~~d~~--~~~~~~~~~--~~~~~v~~~~~~~~~~~ 125 (231)
...|.+++|+|++++| ++++.||.|++||+. +++....+. .+...+.+++|+|++++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~ 163 (450)
T 2vdu_B 84 IKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTT 163 (450)
T ss_dssp ----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSE
T ss_pred ccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCE
Confidence 2259999999999996 889999999999999 777777765 45678999999999999
Q ss_pred EEEeecCCcEEEEECCCCceee----eccCCCCCeEEEEEcCC---CCeEEEEecCCeEEEEeCCCCceeeeeecCCCCC
Q psy4391 126 IVSGSFDESVRIWDVRTGKCLK----TLPAHSDPVSAVHFNRD---GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 198 (231)
Q Consensus 126 l~~~~~d~~i~v~d~~~~~~~~----~~~~~~~~v~~~~~~~~---~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~ 198 (231)
|++++.++.+++|++.++.... .+..|...|.+++|+|+ +++|++++.|+.|++||+.+++.+..+...+...
T Consensus 164 l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~ 243 (450)
T 2vdu_B 164 VIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHF 243 (450)
T ss_dssp EEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSC
T ss_pred EEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCc
Confidence 9999999999999998877544 66778899999999999 9999999999999999999988877766567778
Q ss_pred eEEEEECCCCCEEEEEeCCCeEEEEeCCC
Q psy4391 199 VSFVKFSPNGKYILAATLDNTLKLWDSYP 227 (231)
Q Consensus 199 i~~~~~s~~g~~l~~~s~d~~v~vwd~~~ 227 (231)
|..++|+ +|++|++++.|+.|++||...
T Consensus 244 v~~~~~s-d~~~l~s~~~d~~v~vwd~~~ 271 (450)
T 2vdu_B 244 VSSICCG-KDYLLLSAGGDDKIFAWDWKT 271 (450)
T ss_dssp EEEEEEC-STTEEEEEESSSEEEEEETTT
T ss_pred eEEEEEC-CCCEEEEEeCCCeEEEEECCC
Confidence 9999999 999999999999999999743
No 103
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=8.2e-31 Score=203.05 Aligned_cols=205 Identities=23% Similarity=0.310 Sum_probs=166.3
Q ss_pred eEEeecccccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEE--CCCCCEEEEecCCCcEEEE
Q psy4391 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW--SSDSRLLVSGSDDKTLKIW 96 (231)
Q Consensus 19 ~~~~~~~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~~g~i~~~ 96 (231)
+...+.+|...|.+++|+|++++|++++.||.|++|+..++.... +..|...+.+++| +|+++++++++.|+.|++|
T Consensus 78 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vw 156 (368)
T 3mmy_A 78 IPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFW 156 (368)
T ss_dssp EEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEE
T ss_pred eEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEE
Confidence 335667899999999999999999999999999999998877654 5568889999999 8999999999999999999
Q ss_pred eCCCceeeeeecCCC-----------------------------------------cceEEEEECCCCC----EEEEeec
Q psy4391 97 ELSSGKCLKTLKGHS-----------------------------------------NYVFCCNFNPQSN----LIVSGSF 131 (231)
Q Consensus 97 d~~~~~~~~~~~~~~-----------------------------------------~~v~~~~~~~~~~----~l~~~~~ 131 (231)
|+.+++.+..+..+. ....++.+.++.. .+++++.
T Consensus 157 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (368)
T 3mmy_A 157 DTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSI 236 (368)
T ss_dssp CSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEET
T ss_pred ECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecC
Confidence 998876655544322 1122233333322 2999999
Q ss_pred CCcEEEEECCCC---ceeeeccCCCC------------CeEEEEEcCCCCeEEEEecCCeEEEEeCCCCceeeeeecCCC
Q psy4391 132 DESVRIWDVRTG---KCLKTLPAHSD------------PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 196 (231)
Q Consensus 132 d~~i~v~d~~~~---~~~~~~~~~~~------------~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~ 196 (231)
|+.|++||++.. ..+..+..|.. +|.+++|+|++++|++++.||.|++||+.+++.+..+. .+.
T Consensus 237 dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~ 315 (368)
T 3mmy_A 237 EGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSE-QLD 315 (368)
T ss_dssp TSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECC-CCS
T ss_pred CCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEec-CCC
Confidence 999999999887 44555566654 79999999999999999999999999999998877665 445
Q ss_pred CCeEEEEECCCCCEEEEEeCCCeEEEEeC
Q psy4391 197 PPVSFVKFSPNGKYILAATLDNTLKLWDS 225 (231)
Q Consensus 197 ~~i~~~~~s~~g~~l~~~s~d~~v~vwd~ 225 (231)
.++..++|+|+|++|++++.|+..+.|+.
T Consensus 316 ~~v~~~~~s~~g~~l~~~s~d~~~~~~~~ 344 (368)
T 3mmy_A 316 QPISACCFNHNGNIFAYASSYDWSKGHEF 344 (368)
T ss_dssp SCEEEEEECTTSSCEEEEECCCSTTCGGG
T ss_pred CCceEEEECCCCCeEEEEecccccccccc
Confidence 68999999999999999999886666654
No 104
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.4e-30 Score=200.31 Aligned_cols=200 Identities=15% Similarity=0.155 Sum_probs=171.4
Q ss_pred ecccccceEEEEECCCCC-EEEEEeCCCcEEEeec-CCCcEEEEEec--ccccEEEEEECCCCCEEEEecCCCcEEEEeC
Q psy4391 23 LAGHTKAVSSVKFSPNGE-WLASSSADKLIKIWGA-YDGKFEKTISG--HKLGISDVAWSSDSRLLVSGSDDKTLKIWEL 98 (231)
Q Consensus 23 ~~~h~~~i~~~~~~~~~~-~l~~~~~dg~i~i~~~-~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~ 98 (231)
+.+|...|.+++|+|+++ +|++++.||.|++|+. .++.. ..+.+ |...|.+++|+| ++.+++++.|+.|++||+
T Consensus 52 ~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~ 129 (342)
T 1yfq_A 52 SLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDP 129 (342)
T ss_dssp EEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECH
T ss_pred eeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcc
Confidence 347899999999999999 9999999999999999 77654 66777 889999999999 999999999999999999
Q ss_pred CC---------ceeeeeecCCCcceEEEEECCCCCEEEEeecCCcEEEEECCC-Cce--eeeccCCCCCeEEEEEcC-CC
Q psy4391 99 SS---------GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT-GKC--LKTLPAHSDPVSAVHFNR-DG 165 (231)
Q Consensus 99 ~~---------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~-~~~--~~~~~~~~~~v~~~~~~~-~~ 165 (231)
.+ ++.+..+. +...+.+++|+|++ +++++.++.|++||+++ +.. ......+...+.+++|+| ++
T Consensus 130 ~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~ 206 (342)
T 1yfq_A 130 RNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQ 206 (342)
T ss_dssp HHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGG
T ss_pred cccccccccccCCeeeEEe-eCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCC
Confidence 87 66666666 77889999999987 99999999999999998 543 234456778999999999 99
Q ss_pred CeEEEEecCCeEEEEeCCCC------ceeeeeecCC--------CCCeEEEEECCCCCEEEEEeCCCeEEEEeCCC
Q psy4391 166 SLIVSSSYDGLCRIWDTASG------QCLKTLIDDD--------NPPVSFVKFSPNGKYILAATLDNTLKLWDSYP 227 (231)
Q Consensus 166 ~~l~~~~~dg~i~v~d~~~~------~~~~~~~~~~--------~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~~~ 227 (231)
+++++++.||.+++|++... +....+..+. ...+..++|+|++++|++++.||.|++||...
T Consensus 207 ~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~ 282 (342)
T 1yfq_A 207 EGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQT 282 (342)
T ss_dssp CEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTT
T ss_pred CEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCcc
Confidence 99999999999999999876 5444444332 23799999999999999999999999999743
No 105
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.1e-31 Score=202.12 Aligned_cols=194 Identities=11% Similarity=0.083 Sum_probs=157.7
Q ss_pred cceEEEEECCCCCEEEEEeCCCcEEEeecC---------CCcEEEEEe-cccccEEEEEECC--CCCEEEEecCCCcEEE
Q psy4391 28 KAVSSVKFSPNGEWLASSSADKLIKIWGAY---------DGKFEKTIS-GHKLGISDVAWSS--DSRLLVSGSDDKTLKI 95 (231)
Q Consensus 28 ~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~---------~~~~~~~~~-~~~~~v~~~~~~~--~~~~l~~~~~~g~i~~ 95 (231)
..|.++.|+|+ +++++.|+.+++|+.. ++....... .|...|.+++|+| +++++++++.||.|++
T Consensus 77 ~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~ 153 (343)
T 3lrv_A 77 PNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGF 153 (343)
T ss_dssp ECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEE
T ss_pred CCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEE
Confidence 45667778877 8899999999999764 333333333 4557899999999 9999999999999999
Q ss_pred EeCCCceeeeeecC-CCcceEEEEECCCCCEEEEeecCCcEEEEECCCCcee-eeccC-CCCCeEEEEEcCCCCeEEEEe
Q psy4391 96 WELSSGKCLKTLKG-HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCL-KTLPA-HSDPVSAVHFNRDGSLIVSSS 172 (231)
Q Consensus 96 ~d~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~-~~~~~-~~~~v~~~~~~~~~~~l~~~~ 172 (231)
||+++++....... +...+.+++|+|++.++++|+.|+.|++||+++++.+ ..+.. |.++|.+++|+|++.+|++++
T Consensus 154 wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~ 233 (343)
T 3lrv_A 154 QSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC 233 (343)
T ss_dssp EESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE
T ss_pred EECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe
Confidence 99999887665533 3457899999999999999999999999999999877 67777 899999999999999999999
Q ss_pred cCCeEEEEeCCCCceeeeeecC--CCCCe--EEEEECCCCCEEEEEeC-CCeEEEEeC
Q psy4391 173 YDGLCRIWDTASGQCLKTLIDD--DNPPV--SFVKFSPNGKYILAATL-DNTLKLWDS 225 (231)
Q Consensus 173 ~dg~i~v~d~~~~~~~~~~~~~--~~~~i--~~~~~s~~g~~l~~~s~-d~~v~vwd~ 225 (231)
++.|++||+++++....+... +...+ ..++|+|+|++|++++. |+.|++|+.
T Consensus 234 -~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~ 290 (343)
T 3lrv_A 234 -DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKF 290 (343)
T ss_dssp -SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred -CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEE
Confidence 559999999988765443321 11222 35999999999999998 999999986
No 106
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.7e-30 Score=214.20 Aligned_cols=198 Identities=16% Similarity=0.268 Sum_probs=178.4
Q ss_pred ccccceEEEEECCCCCEEEEEeCCCcEEEeecCCC----cEEEEEeccccc-EEEEEECC--CCCEEEEecCCCcEEEEe
Q psy4391 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG----KFEKTISGHKLG-ISDVAWSS--DSRLLVSGSDDKTLKIWE 97 (231)
Q Consensus 25 ~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~----~~~~~~~~~~~~-v~~~~~~~--~~~~l~~~~~~g~i~~~d 97 (231)
.|.+.|.+++|+|+|++|++++ ++.+++|+..++ +....+.+|... |.+++|+| ++++|++++.||.|++||
T Consensus 16 ~~~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~ 94 (615)
T 1pgu_A 16 TQRNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWG 94 (615)
T ss_dssp CCTTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEE
T ss_pred CccCceeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEe
Confidence 5788999999999999999988 889999999988 788899999999 99999999 999999999999999999
Q ss_pred CCCc--------eeeeeecCCCcceEEEEECCCCCEEEEeecC----CcEEEEECCCCceeeeccCCCCCeEEEEEcCCC
Q psy4391 98 LSSG--------KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD----ESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDG 165 (231)
Q Consensus 98 ~~~~--------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~ 165 (231)
+.++ +....+..+...+.+++|+|+++++++++.+ +.|++|| .++.+..+..|...|.+++|+|++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~ 172 (615)
T 1pgu_A 95 WTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQSR 172 (615)
T ss_dssp EEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECSSS
T ss_pred CCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeeecCCccEEEEEECCCC
Confidence 9754 5666777888999999999999999999987 6788888 567788888999999999999999
Q ss_pred C-eEEEEecCCeEEEEeCCCCceeeeeecCCCC---CeEEEEECCC-CCEEEEEeCCCeEEEEeCC
Q psy4391 166 S-LIVSSSYDGLCRIWDTASGQCLKTLIDDDNP---PVSFVKFSPN-GKYILAATLDNTLKLWDSY 226 (231)
Q Consensus 166 ~-~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~---~i~~~~~s~~-g~~l~~~s~d~~v~vwd~~ 226 (231)
+ .+++++.|+.|++||+.+++.+..+.. +.. .+..++|+|+ +++|++++.||.|++||..
T Consensus 173 ~~~l~~~~~d~~v~vwd~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~ 237 (615)
T 1pgu_A 173 PMRSMTVGDDGSVVFYQGPPFKFSASDRT-HHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGK 237 (615)
T ss_dssp SCEEEEEETTTEEEEEETTTBEEEEEECS-SSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETT
T ss_pred CcEEEEEeCCCcEEEEeCCCcceeeeecc-cCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECC
Confidence 8 799999999999999999887776653 444 7999999999 9999999999999999964
No 107
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.98 E-value=1.1e-30 Score=208.93 Aligned_cols=191 Identities=13% Similarity=0.168 Sum_probs=160.6
Q ss_pred ccccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecccc-----cEEEEEECCCCCEEEEecCCCcEEEEeCC
Q psy4391 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKL-----GISDVAWSSDSRLLVSGSDDKTLKIWELS 99 (231)
Q Consensus 25 ~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~~~g~i~~~d~~ 99 (231)
.|...|.+++|||+|++||+++.||.+++|+... ....+. |.. .+.+++|+|+|++|++|+.||.|++||+.
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~ 159 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIR 159 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECC
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECC
Confidence 4578899999999999999999999999999543 445555 544 49999999999999999999999999999
Q ss_pred Cce-------eeeee----cCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCcee---eec-cCCCCCeEEEEEcCC
Q psy4391 100 SGK-------CLKTL----KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCL---KTL-PAHSDPVSAVHFNRD 164 (231)
Q Consensus 100 ~~~-------~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~---~~~-~~~~~~v~~~~~~~~ 164 (231)
++. .+..+ .+|.+.|.+++|+|+| +++++.|+.+++||+..+... ..+ ..|...|.+++|+
T Consensus 160 ~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs-- 235 (588)
T 2j04_A 160 KNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV-- 235 (588)
T ss_dssp CCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--
T ss_pred CCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--
Confidence 874 24555 5667899999999999 888999999999999887632 344 4677899999999
Q ss_pred CCeEEEEecCCeEEEEeCCCCceeeeeecCCCCCeEEEEE--CCCCCEEEEEeCCCeEEEEeC
Q psy4391 165 GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKF--SPNGKYILAATLDNTLKLWDS 225 (231)
Q Consensus 165 ~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~i~~~~~--s~~g~~l~~~s~d~~v~vwd~ 225 (231)
++.+|+++ ++.|++||+.+++...... .+...+..++| +|+++.++++..||. ++|..
T Consensus 236 g~~LASa~-~~tIkLWd~~~~~~~~~~~-gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~ 295 (588)
T 2j04_A 236 DYKVVLTC-PGYVHKIDLKNYSISSLKT-GSLENFHIIPLNHEKESTILLMSNKTSY-KVLLE 295 (588)
T ss_dssp TTEEEEEC-SSEEEEEETTTTEEEEEEC-SCCSCCCEEEETTCSSCEEEEECSSCEE-EEEES
T ss_pred CCEEEEEe-CCeEEEEECCCCeEEEEEc-CCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEee
Confidence 68888887 6999999999877533322 56778899999 999999999999999 99985
No 108
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.98 E-value=2.8e-31 Score=208.69 Aligned_cols=201 Identities=13% Similarity=0.122 Sum_probs=147.9
Q ss_pred eecccccceEEEEECC--------CCCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCC-EEEEecCCCc
Q psy4391 22 TLAGHTKAVSSVKFSP--------NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR-LLVSGSDDKT 92 (231)
Q Consensus 22 ~~~~h~~~i~~~~~~~--------~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~~g~ 92 (231)
.+.+|.+.|.+++|+| ++++||+|+.|++|++||+.++.....+..|...+.+++|+|++. +|++++.|+.
T Consensus 131 ~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~ 210 (393)
T 4gq1_A 131 GKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGN 210 (393)
T ss_dssp TTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSE
T ss_pred ccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCE
Confidence 4678999999999997 889999999999999999988877777888888999999999875 7899999999
Q ss_pred EEEEeCCCceeeeee-------------------------cCCCcceEEEEEC-CCCCEEEEeecCCcEEEEECCCCcee
Q psy4391 93 LKIWELSSGKCLKTL-------------------------KGHSNYVFCCNFN-PQSNLIVSGSFDESVRIWDVRTGKCL 146 (231)
Q Consensus 93 i~~~d~~~~~~~~~~-------------------------~~~~~~v~~~~~~-~~~~~l~~~~~d~~i~v~d~~~~~~~ 146 (231)
|++||+.+++..... .++...+.++.|. |+++.+++++.|+.+++||+..++..
T Consensus 211 v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~ 290 (393)
T 4gq1_A 211 IRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDY 290 (393)
T ss_dssp EEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC------
T ss_pred EEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCC
Confidence 999999876532211 2345556677775 89999999999999999999887655
Q ss_pred eeccCCCCCeEEE------------------EEcC--CCCeEEEEecCCeEEEEeCCCCceeeeeecCCCCCeEEEEECC
Q psy4391 147 KTLPAHSDPVSAV------------------HFNR--DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP 206 (231)
Q Consensus 147 ~~~~~~~~~v~~~------------------~~~~--~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~ 206 (231)
..+..+...+..+ .++| ++.++++|+.||.|++||+.+++.......+ ..+|.+++|+|
T Consensus 291 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~-~~~V~svafsp 369 (393)
T 4gq1_A 291 NEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQL-GMPIVDFCWHQ 369 (393)
T ss_dssp -------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEEC-SSCEEEEEECT
T ss_pred ceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCC-CCcEEEEEEcC
Confidence 5544443332222 2333 3346677889999999999998877665544 45799999999
Q ss_pred CCCEEEEEeCCCeEEEEe
Q psy4391 207 NGKYILAATLDNTLKLWD 224 (231)
Q Consensus 207 ~g~~l~~~s~d~~v~vwd 224 (231)
||++||+++.+| +.+|.
T Consensus 370 dG~~LA~as~~G-v~lvr 386 (393)
T 4gq1_A 370 DGSHLAIATEGS-VLLTR 386 (393)
T ss_dssp TSSEEEEEESSE-EEEEE
T ss_pred CCCEEEEEeCCC-eEEEE
Confidence 999999998665 55554
No 109
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.98 E-value=1.3e-30 Score=208.57 Aligned_cols=202 Identities=11% Similarity=0.108 Sum_probs=158.3
Q ss_pred eeEEeecccccceEEEEECCCCCEEEEEeCCCcEE-----------------E----------eecCCCcEEEEEe-ccc
Q psy4391 18 VLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIK-----------------I----------WGAYDGKFEKTIS-GHK 69 (231)
Q Consensus 18 ~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~dg~i~-----------------i----------~~~~~~~~~~~~~-~~~ 69 (231)
.+....+.-...|.+++|+|||+++|+++.|++|+ + |+..++.....+. .+.
T Consensus 6 ~~~~~~~~~~~~v~sv~~SpDG~~iASas~D~TV~d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~ 85 (588)
T 2j04_A 6 DLLVDRKEFEDWKNNLTWARDGTLYLTTFPDISIGQPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPV 85 (588)
T ss_dssp CEEECSCCCSSSSCCEEECTTSCEEEECSSSEEEEEECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCS
T ss_pred hhcccHhHhhccEEEEEECCCCCEEEEEcCCceeecccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCC
Confidence 35555666678899999999999999999999985 1 1111111111111 345
Q ss_pred ccEEEEEECCCCCEEEEecCCCcEEEEeCCCceeeeeecCCCc-----ceEEEEECCCCCEEEEeecCCcEEEEECCCCc
Q psy4391 70 LGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSN-----YVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK 144 (231)
Q Consensus 70 ~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~ 144 (231)
..|.+++|+|+|+.||+++.||.|++||.++ .+..+. |.. .+.+++|+|+|++|++|+.||+|++||+..+.
T Consensus 86 ~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~ 162 (588)
T 2j04_A 86 CYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNS 162 (588)
T ss_dssp CCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCT
T ss_pred CcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCc
Confidence 6799999999999999999999999999654 555555 544 49999999999999999999999999999875
Q ss_pred e-------eeec----cCCCCCeEEEEEcCCCCeEEEEecCCeEEEEeCCCCcee---eeeecCCCCCeEEEEECCCCCE
Q psy4391 145 C-------LKTL----PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCL---KTLIDDDNPPVSFVKFSPNGKY 210 (231)
Q Consensus 145 ~-------~~~~----~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~---~~~~~~~~~~i~~~~~s~~g~~ 210 (231)
. +..+ ..|...|.+++|+|+| +++++.|+.+++||+.+++.. .++...+...|..++|+ |+.
T Consensus 163 l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~ 238 (588)
T 2j04_A 163 ENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYK 238 (588)
T ss_dssp TTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTE
T ss_pred cccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCE
Confidence 3 4554 5677899999999999 888889999999999887732 33433455678999999 688
Q ss_pred EEEEeCCCeEEEEeCCC
Q psy4391 211 ILAATLDNTLKLWDSYP 227 (231)
Q Consensus 211 l~~~s~d~~v~vwd~~~ 227 (231)
||+++ ++.|++||...
T Consensus 239 LASa~-~~tIkLWd~~~ 254 (588)
T 2j04_A 239 VVLTC-PGYVHKIDLKN 254 (588)
T ss_dssp EEEEC-SSEEEEEETTT
T ss_pred EEEEe-CCeEEEEECCC
Confidence 88887 79999999643
No 110
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.98 E-value=3e-29 Score=199.50 Aligned_cols=196 Identities=27% Similarity=0.579 Sum_probs=174.7
Q ss_pred eEEeecccccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEecCCCcEEEEeC
Q psy4391 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWEL 98 (231)
Q Consensus 19 ~~~~~~~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~ 98 (231)
....+.+|...|.+++| ++++|++|+.||.|++||..+++....+.+|...|.+++|++ ..+++++.||.|++||+
T Consensus 165 ~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~ 240 (435)
T 1p22_A 165 CKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDM 240 (435)
T ss_dssp EEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEEC
T ss_pred EEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeC
Confidence 34556789999999999 788999999999999999999999999999999999999974 58999999999999999
Q ss_pred CCceee---eeecCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeEEEEecCC
Q psy4391 99 SSGKCL---KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 175 (231)
Q Consensus 99 ~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 175 (231)
.+++.. ..+.+|...+.++.+ +++++++++.|+.|++||+++++.+..+..|...+.++++ ++.++++|+.||
T Consensus 241 ~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg 316 (435)
T 1p22_A 241 ASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDN 316 (435)
T ss_dssp SSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEEEETTS
T ss_pred CCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCC
Confidence 887654 566788889999888 7889999999999999999999999999999999999998 468999999999
Q ss_pred eEEEEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeC
Q psy4391 176 LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225 (231)
Q Consensus 176 ~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~ 225 (231)
.|++||+++++.+..+.. +...+.+++| ++.+|++|+.||.|++||.
T Consensus 317 ~i~iwd~~~~~~~~~~~~-h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~ 363 (435)
T 1p22_A 317 TIRLWDIECGACLRVLEG-HEELVRCIRF--DNKRIVSGAYDGKIKVWDL 363 (435)
T ss_dssp CEEEEETTTCCEEEEECC-CSSCEEEEEC--CSSEEEEEETTSCEEEEEH
T ss_pred eEEEEECCCCCEEEEEeC-CcCcEEEEEe--cCCEEEEEeCCCcEEEEEC
Confidence 999999999988777653 5567888888 7899999999999999995
No 111
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.5e-29 Score=195.36 Aligned_cols=194 Identities=15% Similarity=0.060 Sum_probs=157.0
Q ss_pred ccccceEEEEECC--CCCEEEEEeCCCcEEEeecCCCcEEEEEe-cccccEEEEEECCCCCEEEEecCCCcEEEEeCCCc
Q psy4391 25 GHTKAVSSVKFSP--NGEWLASSSADKLIKIWGAYDGKFEKTIS-GHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSG 101 (231)
Q Consensus 25 ~h~~~i~~~~~~~--~~~~l~~~~~dg~i~i~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~~~ 101 (231)
+|.+.|.+++|+| +++++++++.||.|++||..+++...... .+...+.+++|+|++.++++|+.||.|++||++++
T Consensus 123 ~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~ 202 (343)
T 3lrv_A 123 DSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSP 202 (343)
T ss_dssp CCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCT
T ss_pred CCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCC
Confidence 5678899999999 99999999999999999999888765553 34457999999999999999999999999999998
Q ss_pred eee-eeecC-CCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeeccC---CCCCe--EEEEEcCCCCeEEEEec-
Q psy4391 102 KCL-KTLKG-HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPA---HSDPV--SAVHFNRDGSLIVSSSY- 173 (231)
Q Consensus 102 ~~~-~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~---~~~~v--~~~~~~~~~~~l~~~~~- 173 (231)
+.. ..+.. |...|.+++|+|++.+|++++ ++.|++||+++++.+..+.. +...+ .+++|+|++++|++++.
T Consensus 203 ~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~ 281 (343)
T 3lrv_A 203 DQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNE 281 (343)
T ss_dssp TSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETT
T ss_pred CCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCC
Confidence 876 67777 889999999999999999999 45999999998876555443 32333 36999999999999988
Q ss_pred CCeEEEEeCCCCceeeeeecCCCCCeEEEEECC---CCCEEEEEeCCCeEEEEe
Q psy4391 174 DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP---NGKYILAATLDNTLKLWD 224 (231)
Q Consensus 174 dg~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~---~g~~l~~~s~d~~v~vwd 224 (231)
|+.+++|++......... .++..++|++ +++.+++++.||.+.++-
T Consensus 282 d~~i~v~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~ 330 (343)
T 3lrv_A 282 SNSLTIYKFDKKTKNWTK-----DEESALCLQSDTADFTDMDVVCGDGGIAAIL 330 (343)
T ss_dssp TTEEEEEEECTTTCSEEE-----EEEEECCC----CCCCEEEEEEETTEEEEEE
T ss_pred CCcEEEEEEcccccceEe-----cCceeEecCccccccceeEEEecCCceEEEE
Confidence 999999998665432221 3456677888 888899999999888874
No 112
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.97 E-value=8.8e-29 Score=197.26 Aligned_cols=200 Identities=30% Similarity=0.600 Sum_probs=174.9
Q ss_pred EEeecccccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEecCCCcEEEEeCC
Q psy4391 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELS 99 (231)
Q Consensus 20 ~~~~~~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~ 99 (231)
...+.+|...|.++.| +++++++|+.||.|++||..+++....+.+|...+.++.| +++.+++++.|+.|++||+.
T Consensus 232 ~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~ 307 (445)
T 2ovr_B 232 LHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVE 307 (445)
T ss_dssp EEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETT
T ss_pred EEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECC
Confidence 3456688899999999 6888999999999999999888888888888888999988 78899999999999999999
Q ss_pred CceeeeeecCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeeccC---CCCCeEEEEEcCCCCeEEEEecCCe
Q psy4391 100 SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPA---HSDPVSAVHFNRDGSLIVSSSYDGL 176 (231)
Q Consensus 100 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~dg~ 176 (231)
+++.+..+..|...+.++.+ +++++++++.||.|++||+++++.+..+.. |..+|.+++|+ ++++++++.||.
T Consensus 308 ~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~ 383 (445)
T 2ovr_B 308 TGNCIHTLTGHQSLTSGMEL--KDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGT 383 (445)
T ss_dssp TCCEEEEECCCCSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSE
T ss_pred CCCEEEEEcCCcccEEEEEE--eCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCe
Confidence 99988888888888877766 467999999999999999999988888765 77899999995 589999999999
Q ss_pred EEEEeCCCCceeeeee----cCCCCCeEEEEECCCCCEEEEEeCCCe----EEEEeCCC
Q psy4391 177 CRIWDTASGQCLKTLI----DDDNPPVSFVKFSPNGKYILAATLDNT----LKLWDSYP 227 (231)
Q Consensus 177 i~v~d~~~~~~~~~~~----~~~~~~i~~~~~s~~g~~l~~~s~d~~----v~vwd~~~ 227 (231)
|++||+.+++.+..+. ..+...+..++|+|+|.++++++.||. |.|||..+
T Consensus 384 v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 384 VKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp EEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred EEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCC
Confidence 9999999998877763 245567999999999999999999997 99999743
No 113
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.97 E-value=9.6e-29 Score=197.03 Aligned_cols=196 Identities=35% Similarity=0.718 Sum_probs=174.1
Q ss_pred Eeecccccce-EEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEecCCCcEEEEeCC
Q psy4391 21 FTLAGHTKAV-SSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELS 99 (231)
Q Consensus 21 ~~~~~h~~~i-~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~ 99 (231)
..+.+|.+.+ .+ ++++|++|++|+.||.|++|+..+++....+.+|...|.+++|+ ++.+++++.||.|++||+.
T Consensus 112 ~~l~~h~~~v~~~--~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~ 187 (445)
T 2ovr_B 112 KVLKGHDDHVITC--LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAE 187 (445)
T ss_dssp EEEECSTTSCEEE--EEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETT
T ss_pred EEecccCCCcEEE--EEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECC
Confidence 4567898865 54 45568999999999999999999999999999999999999997 5689999999999999999
Q ss_pred CceeeeeecCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeEEEEecCCeEEE
Q psy4391 100 SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 179 (231)
Q Consensus 100 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v 179 (231)
+++....+..|...+.++.++ ++.+++++.|+.|++||+++++.+..+..|..++.++++ ++.++++++.||.|++
T Consensus 188 ~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i 263 (445)
T 2ovr_B 188 TGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKV 263 (445)
T ss_dssp TTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEE
T ss_pred cCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEE
Confidence 999999999999999999885 568999999999999999999999999999999999998 7889999999999999
Q ss_pred EeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCC
Q psy4391 180 WDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSYP 227 (231)
Q Consensus 180 ~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~~~ 227 (231)
||+.+++.+..+. .+...+..++| ++.++++++.||.|++||...
T Consensus 264 wd~~~~~~~~~~~-~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~ 308 (445)
T 2ovr_B 264 WDPETETCLHTLQ-GHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVET 308 (445)
T ss_dssp EEGGGTEEEEEEC-CCSSCEEEEEE--CSSEEEEEETTSCEEEEETTT
T ss_pred EECCCCcEeEEec-CCCCceEEEEE--CCCEEEEEeCCCeEEEEECCC
Confidence 9999988777665 34567888888 789999999999999999643
No 114
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.97 E-value=1.8e-28 Score=194.93 Aligned_cols=192 Identities=27% Similarity=0.564 Sum_probs=170.9
Q ss_pred ccccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEecCCCcEEEEeCCCceee
Q psy4391 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCL 104 (231)
Q Consensus 25 ~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~ 104 (231)
+|...|.++.+ +++++++|+.||.|++||..+++....+.+|...|.+++| +++.+++++.||.|++||+.+++.+
T Consensus 131 ~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~ 206 (435)
T 1p22_A 131 ETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEML 206 (435)
T ss_dssp SSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEE
T ss_pred CCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEE
Confidence 56677888877 7899999999999999999999999999999999999998 7889999999999999999999999
Q ss_pred eeecCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCcee---eeccCCCCCeEEEEEcCCCCeEEEEecCCeEEEEe
Q psy4391 105 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCL---KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181 (231)
Q Consensus 105 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d 181 (231)
..+..|...+.++.+++ ..+++++.|+.|++||++++... ..+..|...|.++++ +++++++++.||.|++||
T Consensus 207 ~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd 282 (435)
T 1p22_A 207 NTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWN 282 (435)
T ss_dssp EEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE
T ss_pred EEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEE
Confidence 99999999999999974 59999999999999999987755 566788899999998 688999999999999999
Q ss_pred CCCCceeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCC
Q psy4391 182 TASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSYP 227 (231)
Q Consensus 182 ~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~~~ 227 (231)
+.+++.+..+.. +...+.++++ +++++++|+.||.|++||...
T Consensus 283 ~~~~~~~~~~~~-~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~ 325 (435)
T 1p22_A 283 TSTCEFVRTLNG-HKRGIACLQY--RDRLVVSGSSDNTIRLWDIEC 325 (435)
T ss_dssp TTTCCEEEEEEC-CSSCEEEEEE--ETTEEEEEETTSCEEEEETTT
T ss_pred CCcCcEEEEEcC-CCCcEEEEEe--CCCEEEEEeCCCeEEEEECCC
Confidence 999988777653 4567888888 578999999999999999743
No 115
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.97 E-value=3.3e-28 Score=188.73 Aligned_cols=197 Identities=16% Similarity=0.221 Sum_probs=157.8
Q ss_pred ceEEEEECCCCCEE-EEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCC--------------------------
Q psy4391 29 AVSSVKFSPNGEWL-ASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS-------------------------- 81 (231)
Q Consensus 29 ~i~~~~~~~~~~~l-~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~-------------------------- 81 (231)
.+..+.+.++++.+ ++++.|+.|++||..+++....+. +...+.++.|+++.
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~ 138 (355)
T 3vu4_A 60 HLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK-VDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIR 138 (355)
T ss_dssp CCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEE-CSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEE
T ss_pred CeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEE-CCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEecc
Confidence 57788899988877 457778999999999888777665 34567777776542
Q ss_pred ---------CEEEE--ecCCCcEEEEeCCCce----------------eeeeecCCCcceEEEEECCCCCEEEEeecCCc
Q psy4391 82 ---------RLLVS--GSDDKTLKIWELSSGK----------------CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 134 (231)
Q Consensus 82 ---------~~l~~--~~~~g~i~~~d~~~~~----------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 134 (231)
..+++ ++.+|.|++||+.+++ ....+.+|...|.+++|+|++++|++++.|++
T Consensus 139 ~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~ 218 (355)
T 3vu4_A 139 FGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGT 218 (355)
T ss_dssp EEEEEEEETTEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCS
T ss_pred CCceEEEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCC
Confidence 23333 5788999999998754 16778899999999999999999999999998
Q ss_pred -EEEEECCCCceeeecc-C-CCCCeEEEEEcCCCCeEEEEecCCeEEEEeCCCCceeee---------------------
Q psy4391 135 -VRIWDVRTGKCLKTLP-A-HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT--------------------- 190 (231)
Q Consensus 135 -i~v~d~~~~~~~~~~~-~-~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~--------------------- 190 (231)
|++||+++++.+..+. . |...|.+++|+|++++|++++.|+.|++||+........
T Consensus 219 ~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (355)
T 3vu4_A 219 IIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNF 298 (355)
T ss_dssp EEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEE
T ss_pred EEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEE
Confidence 9999999999988887 4 899999999999999999999999999999976532110
Q ss_pred -eecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCC
Q psy4391 191 -LIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSY 226 (231)
Q Consensus 191 -~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~~ 226 (231)
+......+...++|+++|++|++++.||.+++|+..
T Consensus 299 ~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~ 335 (355)
T 3vu4_A 299 KLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVV 335 (355)
T ss_dssp ECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEE
T ss_pred EeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEE
Confidence 011111223568999999999999999999999863
No 116
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=4.8e-28 Score=207.63 Aligned_cols=197 Identities=12% Similarity=0.207 Sum_probs=164.3
Q ss_pred ccccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEecCCCcEEEEeCCCceee
Q psy4391 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCL 104 (231)
Q Consensus 25 ~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~ 104 (231)
.|...|.+++|+| |++|++++.|+.|++||+.+++....+. +...|.+++|+|+++++++++.||.|++||+++++..
T Consensus 56 ~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~ 133 (902)
T 2oaj_A 56 EDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLS 133 (902)
T ss_dssp SSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEE
T ss_pred CCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccc
Confidence 4778999999999 8899999999999999999888877775 5578999999999999999999999999999987653
Q ss_pred -----------eeecCCCcceEEEEECCC-CCEEEEeecCCcEEEEECCCCceeeeccCC------------------CC
Q psy4391 105 -----------KTLKGHSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVRTGKCLKTLPAH------------------SD 154 (231)
Q Consensus 105 -----------~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~------------------~~ 154 (231)
....+|...|.+++|+|+ +..+++|+.|+.| +||+++++.+..+..| ..
T Consensus 134 ~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~ 212 (902)
T 2oaj_A 134 SFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTP 212 (902)
T ss_dssp EEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCC
T ss_pred cceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCC
Confidence 234567888999999996 5789999999999 9999999887776544 46
Q ss_pred CeEEEEEcCCCCeEEEEecCCeEEEEeCCCCceeeeeec-----C------------CCCCeEEEEEC----CCC-CEEE
Q psy4391 155 PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID-----D------------DNPPVSFVKFS----PNG-KYIL 212 (231)
Q Consensus 155 ~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~-----~------------~~~~i~~~~~s----~~g-~~l~ 212 (231)
.|.+++|+|+|++|++++.||.|++||+++++.+..... + +..+|..++|+ |++ .+|+
T Consensus 213 ~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~ 292 (902)
T 2oaj_A 213 KVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLI 292 (902)
T ss_dssp CEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEE
T ss_pred CeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEE
Confidence 799999999999999999999999999999876543110 1 23368999994 554 5677
Q ss_pred EEeCC-----CeEEEEe
Q psy4391 213 AATLD-----NTLKLWD 224 (231)
Q Consensus 213 ~~s~d-----~~v~vwd 224 (231)
+|+.| +.+.+|+
T Consensus 293 sg~~~~~~~~~~v~~~~ 309 (902)
T 2oaj_A 293 SHKSISRGDNQSLTMID 309 (902)
T ss_dssp EEECSTTSSCCCEEEEE
T ss_pred eCCCCCCCCCceEEEEe
Confidence 77665 3788888
No 117
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.97 E-value=6.9e-28 Score=184.94 Aligned_cols=174 Identities=22% Similarity=0.381 Sum_probs=149.3
Q ss_pred eeEEeecccccceEEEEECC--CCCEEEEEeCCCcEEEeecCCC---------cEEEEEecccccEEEEEECCC--CCEE
Q psy4391 18 VLKFTLAGHTKAVSSVKFSP--NGEWLASSSADKLIKIWGAYDG---------KFEKTISGHKLGISDVAWSSD--SRLL 84 (231)
Q Consensus 18 ~~~~~~~~h~~~i~~~~~~~--~~~~l~~~~~dg~i~i~~~~~~---------~~~~~~~~~~~~v~~~~~~~~--~~~l 84 (231)
.....+.+|...|.+++|+| ++++|++++.||.|++|+..++ +....+..|...+.+++|+|+ ++++
T Consensus 48 ~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l 127 (351)
T 3f3f_A 48 ELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKL 127 (351)
T ss_dssp EEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEE
T ss_pred eecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEE
Confidence 34556678999999999999 6999999999999999999776 456677788899999999999 9999
Q ss_pred EEecCCCcEEEEeCCCcee------------------------------------------------------------e
Q psy4391 85 VSGSDDKTLKIWELSSGKC------------------------------------------------------------L 104 (231)
Q Consensus 85 ~~~~~~g~i~~~d~~~~~~------------------------------------------------------------~ 104 (231)
++++.||.|++||+.+++. .
T Consensus 128 ~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 207 (351)
T 3f3f_A 128 ACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVA 207 (351)
T ss_dssp EEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEE
T ss_pred EEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeee
Confidence 9999999999999865431 2
Q ss_pred eeecCCCcceEEEEECCCC----CEEEEeecCCcEEEEECCCC-------------------------------------
Q psy4391 105 KTLKGHSNYVFCCNFNPQS----NLIVSGSFDESVRIWDVRTG------------------------------------- 143 (231)
Q Consensus 105 ~~~~~~~~~v~~~~~~~~~----~~l~~~~~d~~i~v~d~~~~------------------------------------- 143 (231)
..+.+|...+.+++|+|++ +++++++.|+.|++||++.+
T Consensus 208 ~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (351)
T 3f3f_A 208 AKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEK 287 (351)
T ss_dssp EECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC------------------------------------
T ss_pred eecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCccccccccccccccccee
Confidence 3344677889999999998 89999999999999999865
Q ss_pred ---------ceeeeccCCCCCeEEEEEcCCCCeEEEEecCCeEEEEeCCCCceeeee
Q psy4391 144 ---------KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 191 (231)
Q Consensus 144 ---------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~ 191 (231)
+.+..+..|...|.+++|+|++++|++++.||.|++||+.+++.+..+
T Consensus 288 ~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~ 344 (351)
T 3f3f_A 288 AELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFKCM 344 (351)
T ss_dssp ---CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEEE
T ss_pred eeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcchhhe
Confidence 455667788999999999999999999999999999999987655443
No 118
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.96 E-value=9.3e-29 Score=194.31 Aligned_cols=196 Identities=18% Similarity=0.237 Sum_probs=142.4
Q ss_pred EEEECCCCCEEEEEeCCCcEEEeecCCCcEEE-----EEecccccEEEEEECC--------CCCEEEEecCCCcEEEEeC
Q psy4391 32 SVKFSPNGEWLASSSADKLIKIWGAYDGKFEK-----TISGHKLGISDVAWSS--------DSRLLVSGSDDKTLKIWEL 98 (231)
Q Consensus 32 ~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~-----~~~~~~~~v~~~~~~~--------~~~~l~~~~~~g~i~~~d~ 98 (231)
...+.+++.+|++++.|++|++|+..++.... .+.+|...|.+++|+| ++++|++++.|++|++||+
T Consensus 94 ~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~ 173 (393)
T 4gq1_A 94 VNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRL 173 (393)
T ss_dssp ---CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEE
T ss_pred eeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEEC
Confidence 33444566789999999999999998775433 2457889999999997 7889999999999999999
Q ss_pred CCceeeeeecCCCcceEEEEECCCC-CEEEEeecCCcEEEEECCCCceeeec-------------------------cCC
Q psy4391 99 SSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVRTGKCLKTL-------------------------PAH 152 (231)
Q Consensus 99 ~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~v~d~~~~~~~~~~-------------------------~~~ 152 (231)
.++.....+..|...+.+++|+|++ .+|++++.|+.|++||+++++..... ..|
T Consensus 174 ~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 253 (393)
T 4gq1_A 174 TDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGI 253 (393)
T ss_dssp ETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CC
T ss_pred CCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccc
Confidence 8887777777788899999999987 48999999999999999887543221 235
Q ss_pred CCCeEEEEEc-CCCCeEEEEecCCeEEEEeCCCCceeeeeecCC------------------CCCeEEEEECC--CCCEE
Q psy4391 153 SDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD------------------NPPVSFVKFSP--NGKYI 211 (231)
Q Consensus 153 ~~~v~~~~~~-~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~------------------~~~i~~~~~s~--~g~~l 211 (231)
...+.++.|. |+++.+++++.|+.+++||+..++....+.... ...+. ..++| ++.++
T Consensus 254 ~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 332 (393)
T 4gq1_A 254 ASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLG-ACPHPRYMDYFA 332 (393)
T ss_dssp SSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSC-CEECSSCTTEEE
T ss_pred cccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCccee-EEEccCCCCEEE
Confidence 5667788886 799999999999999999998765443332110 11111 22333 44567
Q ss_pred EEEeCCCeEEEEeCCCC
Q psy4391 212 LAATLDNTLKLWDSYPC 228 (231)
Q Consensus 212 ~~~s~d~~v~vwd~~~~ 228 (231)
++|+.||.|++||..+.
T Consensus 333 ~sgs~Dg~V~lwd~~~~ 349 (393)
T 4gq1_A 333 TAHSQHGLIQLINTYEK 349 (393)
T ss_dssp EEETTTTEEEEEETTCT
T ss_pred EEECCCCEEEEEECCCC
Confidence 78889999999997654
No 119
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.96 E-value=1.1e-27 Score=186.35 Aligned_cols=160 Identities=18% Similarity=0.229 Sum_probs=135.7
Q ss_pred ccccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEE--EecccccEEEEEECCCCCEEEEecCCC----cEEEEeC
Q psy4391 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT--ISGHKLGISDVAWSSDSRLLVSGSDDK----TLKIWEL 98 (231)
Q Consensus 25 ~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~~g----~i~~~d~ 98 (231)
.|...|.+++|+|+|+++++++.+ .+.+|+..++..... ...|...+.+++|+|+++.+++++.++ .+++|++
T Consensus 174 ~~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~ 252 (365)
T 4h5i_A 174 ETRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISI 252 (365)
T ss_dssp ECSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEE
T ss_pred CCCCceEEEEEccCCceEEeccce-eEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeeccc
Confidence 477889999999999999998755 556666656655433 345677899999999999999998877 5788888
Q ss_pred CCcee----eeeecCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeec-cCCCCCeEEEEEcCCCCeEEEEec
Q psy4391 99 SSGKC----LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTL-PAHSDPVSAVHFNRDGSLIVSSSY 173 (231)
Q Consensus 99 ~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~ 173 (231)
..... ...+..|...|.+++|+|+|++||+|+.|+.|++||+++++.+..+ .+|..+|++++|+|||++|++++.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~ 332 (365)
T 4h5i_A 253 KSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSA 332 (365)
T ss_dssp ETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEET
T ss_pred ccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeC
Confidence 76542 3456678888999999999999999999999999999999988874 789999999999999999999999
Q ss_pred CCeEEEEeCCCC
Q psy4391 174 DGLCRIWDTASG 185 (231)
Q Consensus 174 dg~i~v~d~~~~ 185 (231)
|++|+|||+..+
T Consensus 333 D~tvrvw~ip~~ 344 (365)
T 4h5i_A 333 ANTIHIIKLPLN 344 (365)
T ss_dssp TSEEEEEECCTT
T ss_pred CCeEEEEEcCCC
Confidence 999999999754
No 120
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.96 E-value=1.2e-26 Score=183.67 Aligned_cols=194 Identities=25% Similarity=0.446 Sum_probs=162.1
Q ss_pred eEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEe--cccccEEEEEECCCCCEEEEecCCCcEEEEeCCCceeeeee
Q psy4391 30 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS--GHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTL 107 (231)
Q Consensus 30 i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~ 107 (231)
+..++|+++ +.|++|. |++|++||..+++....+. +|...|.+++|+|+|++|++|+.||.|++||+++++.++.+
T Consensus 108 ~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~ 185 (420)
T 4gga_A 108 LNLVDWSSG-NVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNM 185 (420)
T ss_dssp CBCEEECTT-SEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred ceeEEECCC-CEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEE
Confidence 567999975 5777765 9999999999998777665 56677999999999999999999999999999999999999
Q ss_pred cCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCc-eeeeccCCCCCeEEEEEcCCCCeEEEEecCCeEEEEeCCCCc
Q psy4391 108 KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK-CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 186 (231)
Q Consensus 108 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~ 186 (231)
.+|...+.++.++ +.++++|+.|+.+++||.+... .+..+..|...+..+.++|+++++++++.|+.+++||..+++
T Consensus 186 ~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~ 263 (420)
T 4gga_A 186 TSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGE 263 (420)
T ss_dssp CCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCS
T ss_pred eCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeecccc
Confidence 9999988887764 6799999999999999988654 456678899999999999999999999999999999998765
Q ss_pred eee---eeecCCCCCeEEEEECCCCC-EEEE--EeCCCeEEEEeCCC
Q psy4391 187 CLK---TLIDDDNPPVSFVKFSPNGK-YILA--ATLDNTLKLWDSYP 227 (231)
Q Consensus 187 ~~~---~~~~~~~~~i~~~~~s~~g~-~l~~--~s~d~~v~vwd~~~ 227 (231)
... .....+...|..++|+|++. .+++ |+.|+.|++||...
T Consensus 264 ~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t 310 (420)
T 4gga_A 264 GGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCS 310 (420)
T ss_dssp SCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTT
T ss_pred ccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCc
Confidence 321 22334566799999999775 4444 35799999999743
No 121
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.96 E-value=4.4e-26 Score=178.46 Aligned_cols=200 Identities=17% Similarity=0.199 Sum_probs=166.0
Q ss_pred EeecccccceEEEEECCCCCEE-EEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEE-EecCCCcEEEEeC
Q psy4391 21 FTLAGHTKAVSSVKFSPNGEWL-ASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV-SGSDDKTLKIWEL 98 (231)
Q Consensus 21 ~~~~~h~~~i~~~~~~~~~~~l-~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~~g~i~~~d~ 98 (231)
..+..| ..+.+++|+|+++++ ++++.++.|++||..+++....+..+. .+..++|+|++++++ ++..++.|++||+
T Consensus 26 ~~~~~~-~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~ 103 (391)
T 1l0q_A 26 ATIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDT 103 (391)
T ss_dssp EEEECS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEET
T ss_pred EEeecC-CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEEC
Confidence 344445 458999999999977 566789999999999988887777554 899999999999875 4556799999999
Q ss_pred CCceeeeeecCCCcceEEEEECCCCCEE-EEeecCCcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeE-EEEecCCe
Q psy4391 99 SSGKCLKTLKGHSNYVFCCNFNPQSNLI-VSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLI-VSSSYDGL 176 (231)
Q Consensus 99 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~ 176 (231)
.+++....+..+ ..+.+++|+|+++.+ ++++.++.|++||+++++.+..+..+ ..+..++|+|+++.+ ++++.++.
T Consensus 104 ~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~ 181 (391)
T 1l0q_A 104 TSNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMS 181 (391)
T ss_dssp TTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTE
T ss_pred CCCeEEEEEeCC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-CCcceEEECCCCCEEEEEeCCCCE
Confidence 999887777654 457899999999977 67788999999999999887777665 456899999999987 56778899
Q ss_pred EEEEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEe---CCCeEEEEeCC
Q psy4391 177 CRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT---LDNTLKLWDSY 226 (231)
Q Consensus 177 i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s---~d~~v~vwd~~ 226 (231)
|++||+.+++....+.. ...+..++|+|+|++|++++ .++.|++||..
T Consensus 182 v~~~d~~~~~~~~~~~~--~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~ 232 (391)
T 1l0q_A 182 ISVIDTVTNSVIDTVKV--EAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTG 232 (391)
T ss_dssp EEEEETTTTEEEEEEEC--SSEEEEEEECTTSSEEEEEEECSSCCEEEEEETT
T ss_pred EEEEECCCCeEEEEEec--CCCccceEECCCCCEEEEEecCcCCCcEEEEECC
Confidence 99999999887666543 34578899999999999988 68999999964
No 122
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=2e-27 Score=179.64 Aligned_cols=162 Identities=17% Similarity=0.196 Sum_probs=128.4
Q ss_pred eEEeecccccceEEEEECC---CCCEEEEEeCCCcEEEeecCCCcEEEEEeccc---ccEEEEEECCCCCEE--------
Q psy4391 19 LKFTLAGHTKAVSSVKFSP---NGEWLASSSADKLIKIWGAYDGKFEKTISGHK---LGISDVAWSSDSRLL-------- 84 (231)
Q Consensus 19 ~~~~~~~h~~~i~~~~~~~---~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l-------- 84 (231)
...++.+|...++.++|++ ++++|++++.|++|++||..+++....+.++. ..+..++|+|+|+++
T Consensus 170 ~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~ 249 (356)
T 2w18_A 170 GKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCA 249 (356)
T ss_dssp EEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC----
T ss_pred eeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCC
Confidence 4445556777777778887 66889999999999999999999999887643 356777999999876
Q ss_pred ----EEecCCCcEEEEeCCCceeeeee-----cCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeeccCCCCC
Q psy4391 85 ----VSGSDDKTLKIWELSSGKCLKTL-----KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDP 155 (231)
Q Consensus 85 ----~~~~~~g~i~~~d~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~ 155 (231)
++|+.|+++++||..+++.+..+ .+|...+.+..+ ++.++++++.|++|++||+++++++..+..|...
T Consensus 250 ~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~ 327 (356)
T 2w18_A 250 KESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQ 327 (356)
T ss_dssp --------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEE--ETTEEEEEETTSCEEEEETTTCSEEEEECCC--C
T ss_pred cceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEcccc--CCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCC
Confidence 56778999999999998876554 245444443333 3778999999999999999999999999888765
Q ss_pred eE-EEEEcCCCCeEEEEecCCeEEEEeC
Q psy4391 156 VS-AVHFNRDGSLIVSSSYDGLCRIWDT 182 (231)
Q Consensus 156 v~-~~~~~~~~~~l~~~~~dg~i~v~d~ 182 (231)
+. .++|+|||++|++|+.|++|++||+
T Consensus 328 vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 328 HWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp CCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred eEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 54 6899999999999999999999985
No 123
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.96 E-value=2.1e-25 Score=174.64 Aligned_cols=194 Identities=18% Similarity=0.245 Sum_probs=161.9
Q ss_pred cceEEEEECCCCCEEEE-EeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEE-EEecCCCcEEEEeCCCceeee
Q psy4391 28 KAVSSVKFSPNGEWLAS-SSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLL-VSGSDDKTLKIWELSSGKCLK 105 (231)
Q Consensus 28 ~~i~~~~~~~~~~~l~~-~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~~g~i~~~d~~~~~~~~ 105 (231)
..+.+++|+|++++|++ +..++.|++||..+++....+..+ ..+..++|+|+++.+ ++++.++.|++||+.+++...
T Consensus 74 ~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~ 152 (391)
T 1l0q_A 74 SSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVIN 152 (391)
T ss_dssp SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred CCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEE
Confidence 38999999999998765 456799999999988877776654 468999999999977 688889999999999998888
Q ss_pred eecCCCcceEEEEECCCCCEE-EEeecCCcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeEEEEe---cCCeEEEEe
Q psy4391 106 TLKGHSNYVFCCNFNPQSNLI-VSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSS---YDGLCRIWD 181 (231)
Q Consensus 106 ~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~dg~i~v~d 181 (231)
.+..+ ..+..+.|+|+++.+ ++++.++.|++||+++++....+.. ...+.+++|+|+++++++++ .++.|++||
T Consensus 153 ~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d 230 (391)
T 1l0q_A 153 TVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKV-EAAPSGIAVNPEGTKAYVTNVDKYFNTVSMID 230 (391)
T ss_dssp EEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC-SSEEEEEEECTTSSEEEEEEECSSCCEEEEEE
T ss_pred EEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEec-CCCccceEECCCCCEEEEEecCcCCCcEEEEE
Confidence 77755 446889999999887 5667889999999999887766653 55788999999999998887 689999999
Q ss_pred CCCCceeeeeecCCCCCeEEEEECCCCCEE-EEEeCCCeEEEEeCC
Q psy4391 182 TASGQCLKTLIDDDNPPVSFVKFSPNGKYI-LAATLDNTLKLWDSY 226 (231)
Q Consensus 182 ~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l-~~~s~d~~v~vwd~~ 226 (231)
+.+++.+..+..+ ..+..++|+|+|++| ++++.|+.|++||..
T Consensus 231 ~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~ 274 (391)
T 1l0q_A 231 TGTNKITARIPVG--PDPAGIAVTPDGKKVYVALSFXNTVSVIDTA 274 (391)
T ss_dssp TTTTEEEEEEECC--SSEEEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred CCCCeEEEEEecC--CCccEEEEccCCCEEEEEcCCCCEEEEEECC
Confidence 9998877766543 346789999999988 566789999999974
No 124
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.96 E-value=3.9e-26 Score=181.04 Aligned_cols=201 Identities=10% Similarity=0.086 Sum_probs=170.1
Q ss_pred ecccccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEE-EecCCCcEEEEeCCCc
Q psy4391 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV-SGSDDKTLKIWELSSG 101 (231)
Q Consensus 23 ~~~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~~g~i~~~d~~~~ 101 (231)
+.+|...|.+++|+++++++++++.|+.|++|+..+++....+..+...+..++|+|+++.++ ++..++.|++||+.++
T Consensus 165 ~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~ 244 (433)
T 3bws_A 165 YKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTK 244 (433)
T ss_dssp HHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTT
T ss_pred ccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCC
Confidence 347888999999999999999999999999999998888888888888899999999999885 5557999999999998
Q ss_pred eeeeeecCCCcceEEEEECCCCCEEEEee--------cCCcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeE-EEEe
Q psy4391 102 KCLKTLKGHSNYVFCCNFNPQSNLIVSGS--------FDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLI-VSSS 172 (231)
Q Consensus 102 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--------~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~ 172 (231)
+....+..+ ..+..++|+|+++.+++++ .|+.|++||+++++.+..+ .+...+..++|+|+++.+ ++++
T Consensus 245 ~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~ 322 (433)
T 3bws_A 245 LEIRKTDKI-GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTI-GPPGNKRHIVSGNTENKIYVSDM 322 (433)
T ss_dssp EEEEECCCC-SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEE-EEEECEEEEEECSSTTEEEEEET
T ss_pred cEEEEecCC-CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeec-cCCCCcceEEECCCCCEEEEEec
Confidence 887777654 4588999999999999888 4889999999988776654 345578899999999755 5668
Q ss_pred cCCeEEEEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEeC---------------CCeEEEEeCCC
Q psy4391 173 YDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATL---------------DNTLKLWDSYP 227 (231)
Q Consensus 173 ~dg~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~---------------d~~v~vwd~~~ 227 (231)
.++.+.+||+.+++....+. ....+..++|+|+|++|++++. ||.|.+||...
T Consensus 323 ~~~~v~v~d~~~~~~~~~~~--~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~ 390 (433)
T 3bws_A 323 CCSKIEVYDLKEKKVQKSIP--VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTT 390 (433)
T ss_dssp TTTEEEEEETTTTEEEEEEE--CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTT
T ss_pred CCCEEEEEECCCCcEEEEec--CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCC
Confidence 89999999999888776654 3456789999999999988886 57999999743
No 125
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.96 E-value=1.6e-25 Score=177.61 Aligned_cols=201 Identities=15% Similarity=0.161 Sum_probs=166.3
Q ss_pred EeecccccceEEEEECCCCCEEEE-EeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEec--------CCC
Q psy4391 21 FTLAGHTKAVSSVKFSPNGEWLAS-SSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGS--------DDK 91 (231)
Q Consensus 21 ~~~~~h~~~i~~~~~~~~~~~l~~-~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--------~~g 91 (231)
..+..|...+.+++|+|+++.+++ +..++.|++||..+++....+..+ ..+..++|+|+++.+++++ .|+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg 283 (433)
T 3bws_A 205 ATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI-GLPRGLLLSKDGKELYIAQFSASNQESGGG 283 (433)
T ss_dssp EEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC-SEEEEEEECTTSSEEEEEEEESCTTCSCCE
T ss_pred EEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC-CCceEEEEcCCCCEEEEEECCCCccccCCC
Confidence 445578889999999999998854 557999999999888777766654 4589999999999998887 588
Q ss_pred cEEEEeCCCceeeeeecCCCcceEEEEECCCCCEE-EEeecCCcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeEEE
Q psy4391 92 TLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLI-VSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVS 170 (231)
Q Consensus 92 ~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 170 (231)
.|++||+.+++....+. +...+..++|+|+++.+ ++++.++.|++||+++++.+..+. +...+.+++|+|+++++++
T Consensus 284 ~i~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~ 361 (433)
T 3bws_A 284 RLGIYSMDKEKLIDTIG-PPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP-VFDKPNTIALSPDGKYLYV 361 (433)
T ss_dssp EEEEEETTTTEEEEEEE-EEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEEE
T ss_pred eEEEEECCCCcEEeecc-CCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec-CCCCCCeEEEcCCCCEEEE
Confidence 99999999888766553 34567889999999754 666889999999999988777765 5667899999999998888
Q ss_pred Eec---------------CCeEEEEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEeC-CCeEEEEeCC
Q psy4391 171 SSY---------------DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATL-DNTLKLWDSY 226 (231)
Q Consensus 171 ~~~---------------dg~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~-d~~v~vwd~~ 226 (231)
++. ||.|++||+.+++.+..+.. ...+..++|+|+|++|++++. |+.|++|+..
T Consensus 362 ~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 362 SCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA--GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp EECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC--SSSEEEEEECTTSCEEEEEETTTTEEEEEEET
T ss_pred EecCCCccccccccccccceEEEEEECCCCcEEEEecC--CCCCceEEEcCCCCEEEEEECCCCeEEEEEec
Confidence 776 57999999999987776654 346789999999999998875 9999999864
No 126
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.96 E-value=1.3e-25 Score=177.67 Aligned_cols=199 Identities=18% Similarity=0.186 Sum_probs=160.3
Q ss_pred eecccccceEEEEECCCCCEEEEEeCCC---cEEEeecCCCcEEEEEecccccEEEEEECCCCCEEE-EecCCCc--EEE
Q psy4391 22 TLAGHTKAVSSVKFSPNGEWLASSSADK---LIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV-SGSDDKT--LKI 95 (231)
Q Consensus 22 ~~~~h~~~i~~~~~~~~~~~l~~~~~dg---~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~~g~--i~~ 95 (231)
.+.+|...+.+++|+|+|++|++++.++ .|++||..+++.. .+..+...+.+++|+|+|+.|+ +++.++. |++
T Consensus 173 ~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~ 251 (415)
T 2hqs_A 173 VVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYV 251 (415)
T ss_dssp EEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEE
T ss_pred EEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEE
Confidence 4457888999999999999999988875 9999999887764 4566677899999999999887 6665554 999
Q ss_pred EeCCCceeeeeecCCCcceEEEEECCCCCEEEEeec-CC--cEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeEEEEe
Q psy4391 96 WELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF-DE--SVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSS 172 (231)
Q Consensus 96 ~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~--~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 172 (231)
||+.+++. ..+..+...+..+.|+|+|+.|++++. ++ .|++||+.+++. ..+..+...+..++|+|+|++|++++
T Consensus 252 ~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdG~~l~~~~ 329 (415)
T 2hqs_A 252 MDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP-QRITWEGSQNQDADVSSDGKFMVMVS 329 (415)
T ss_dssp EETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC-EECCCSSSEEEEEEECTTSSEEEEEE
T ss_pred EECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCE-EEEecCCCcccCeEECCCCCEEEEEE
Confidence 99988775 456667778899999999999988876 44 677889987764 44555667888999999999999887
Q ss_pred cC---CeEEEEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEeCCC---eEEEEeCC
Q psy4391 173 YD---GLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN---TLKLWDSY 226 (231)
Q Consensus 173 ~d---g~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~---~v~vwd~~ 226 (231)
.+ ..|.+||+.+++.. .+... ..+..++|+|+|++|++++.++ .|.+||..
T Consensus 330 ~~~g~~~i~~~d~~~~~~~-~l~~~--~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~ 386 (415)
T 2hqs_A 330 SNGGQQHIAKQDLATGGVQ-VLSST--FLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTD 386 (415)
T ss_dssp ECSSCEEEEEEETTTCCEE-ECCCS--SSCEEEEECTTSSEEEEEEEETTEEEEEEEETT
T ss_pred CcCCceEEEEEECCCCCEE-EecCC--CCcCCeEEcCCCCEEEEEEcCCCccEEEEEECC
Confidence 64 58999999988753 33322 2678899999999999988877 89999863
No 127
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.96 E-value=1e-25 Score=171.34 Aligned_cols=194 Identities=24% Similarity=0.421 Sum_probs=160.8
Q ss_pred eEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEe--cccccEEEEEECCCCCEEEEecCCCcEEEEeCCCceeeeee
Q psy4391 30 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS--GHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTL 107 (231)
Q Consensus 30 i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~ 107 (231)
..+++||+++ +|++| .|++|++||..+++....+. +|...|.+++|+|+++++++|+.||.|++||+++++.+..+
T Consensus 28 ~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~ 105 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNM 105 (318)
T ss_dssp CBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred ceEEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEe
Confidence 4679999876 66665 59999999999998877665 56677999999999999999999999999999999999999
Q ss_pred cCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCc-eeeeccCCCCCeEEEEEcCCCCeEEEEecCCeEEEEeCCCCc
Q psy4391 108 KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK-CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 186 (231)
Q Consensus 108 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~ 186 (231)
.+|...+.++. +++..+++++.++.+++|+...+. .+..+..|...+..+.++++++++++++.||.|++||+++++
T Consensus 106 ~~h~~~~~~~~--~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~ 183 (318)
T 4ggc_A 106 TSHSARVGSLS--WNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGE 183 (318)
T ss_dssp ECCSSCEEEEE--EETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBT
T ss_pred cCccceEEEee--cCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCc
Confidence 99888776554 556799999999999999988764 456677889999999999999999999999999999998765
Q ss_pred eee---eeecCCCCCeEEEEECCCCCEE---EEEeCCCeEEEEeCCC
Q psy4391 187 CLK---TLIDDDNPPVSFVKFSPNGKYI---LAATLDNTLKLWDSYP 227 (231)
Q Consensus 187 ~~~---~~~~~~~~~i~~~~~s~~g~~l---~~~s~d~~v~vwd~~~ 227 (231)
... .........+..++++|++..+ ++++.++.|++||...
T Consensus 184 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~ 230 (318)
T 4ggc_A 184 GGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCS 230 (318)
T ss_dssp TBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTT
T ss_pred ccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccc
Confidence 432 2223445678889999987644 3566789999999643
No 128
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.93 E-value=3.5e-25 Score=175.96 Aligned_cols=198 Identities=15% Similarity=0.101 Sum_probs=153.0
Q ss_pred ccceEEEEECCCCCEEEEEeCCCcEEEeecCCC----------cEEEE-----EecccccEEEEEECCCCCEEE----Ee
Q psy4391 27 TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG----------KFEKT-----ISGHKLGISDVAWSSDSRLLV----SG 87 (231)
Q Consensus 27 ~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~----------~~~~~-----~~~~~~~v~~~~~~~~~~~l~----~~ 87 (231)
...+..+++++++.++++++.++ +++|+.... ..... ...+...|.+++|+|++++|+ ++
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sg 114 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSS 114 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEET
T ss_pred CCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEecc
Confidence 34578999999999999999888 888764210 01111 112345699999999999999 78
Q ss_pred cCCCcEEEEeCCCc--------e---eeeeecCCCcceEEEEECCC-CCEEEEeecCCcEEEEECCCCceeeeccCCCCC
Q psy4391 88 SDDKTLKIWELSSG--------K---CLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDP 155 (231)
Q Consensus 88 ~~~g~i~~~d~~~~--------~---~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~ 155 (231)
+.|+.|++||+.+. + ....+.+|...+.+++|+|+ +.++++++.|+.|++||++++..+.....|...
T Consensus 115 s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~ 194 (434)
T 2oit_A 115 EYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVA 194 (434)
T ss_dssp TTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGC
T ss_pred CCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCc
Confidence 88999999998654 1 13445567889999999998 789999999999999999988766666677889
Q ss_pred eEEEEEcCCCCeEEEEecCCeEEEEeCCCCceeeeeecCC------CCCeEEEEECCCCCEEEEEe-CCC------eEEE
Q psy4391 156 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD------NPPVSFVKFSPNGKYILAAT-LDN------TLKL 222 (231)
Q Consensus 156 v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~------~~~i~~~~~s~~g~~l~~~s-~d~------~v~v 222 (231)
+.+++|+|+|++|++|+.||.|++||++ ++....+.... ...+..++|++++.++++.+ .|| .+++
T Consensus 195 v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i 273 (434)
T 2oit_A 195 VTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVM 273 (434)
T ss_dssp EEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEE
T ss_pred eeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEE
Confidence 9999999999999999999999999998 44444332221 12678899999988876544 343 3889
Q ss_pred EeCC
Q psy4391 223 WDSY 226 (231)
Q Consensus 223 wd~~ 226 (231)
||..
T Consensus 274 ~~l~ 277 (434)
T 2oit_A 274 ALLP 277 (434)
T ss_dssp EECC
T ss_pred EEec
Confidence 9964
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.93 E-value=9e-24 Score=167.05 Aligned_cols=202 Identities=12% Similarity=0.093 Sum_probs=154.7
Q ss_pred EeecccccceEEEEECC--------------CCCEEEEEeCC------CcEEEeecCCCcEEEEEecccccEEEEEECCC
Q psy4391 21 FTLAGHTKAVSSVKFSP--------------NGEWLASSSAD------KLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 80 (231)
Q Consensus 21 ~~~~~h~~~i~~~~~~~--------------~~~~l~~~~~d------g~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~ 80 (231)
..+.+|...+..+++++ .+..++.++.+ +.|++||... .....+..|...+.+++|+|+
T Consensus 111 ~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g-~~~~~l~~~~~~v~~~~~Spd 189 (415)
T 2hqs_A 111 NSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDG-YNQFVVHRSPQPLMSPAWSPD 189 (415)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTS-CSCEEEEEESSCEEEEEECTT
T ss_pred eEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCC-CCCEEEeCCCCcceeeEEcCC
Confidence 44556666666666553 15566555443 7999999864 445667777888999999999
Q ss_pred CCEEEEecCCC---cEEEEeCCCceeeeeecCCCcceEEEEECCCCCEEE-EeecCCc--EEEEECCCCceeeeccCCCC
Q psy4391 81 SRLLVSGSDDK---TLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIV-SGSFDES--VRIWDVRTGKCLKTLPAHSD 154 (231)
Q Consensus 81 ~~~l~~~~~~g---~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~--i~v~d~~~~~~~~~~~~~~~ 154 (231)
|+.|++++.++ .|++||+.+++.. .+..+...+.+++|+|+|+.|+ +++.++. |++||+++++. ..+..+..
T Consensus 190 g~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~ 267 (415)
T 2hqs_A 190 GSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRS 267 (415)
T ss_dssp SSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSS
T ss_pred CCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCC
Confidence 99999998775 9999999988765 4555667889999999999887 5555554 99999998775 56667778
Q ss_pred CeEEEEEcCCCCeEEEEec-CC--eEEEEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEeCC---CeEEEEeCCC
Q psy4391 155 PVSAVHFNRDGSLIVSSSY-DG--LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD---NTLKLWDSYP 227 (231)
Q Consensus 155 ~v~~~~~~~~~~~l~~~~~-dg--~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d---~~v~vwd~~~ 227 (231)
.+.+++|+|||++|++++. ++ .|.+||+.+++.. .+. .+...+..++|+|+|++|++++.+ ..|.+||...
T Consensus 268 ~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~-~l~-~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~ 344 (415)
T 2hqs_A 268 NNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQ-RIT-WEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLAT 344 (415)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCE-ECC-CSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTT
T ss_pred cccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEE-EEe-cCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCC
Confidence 8999999999999988776 44 7888899887643 222 234467789999999999998865 5899999643
No 130
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.92 E-value=5.5e-23 Score=154.30 Aligned_cols=201 Identities=18% Similarity=0.246 Sum_probs=149.3
Q ss_pred ecccccceEEEEECCCCCEEEEEeCCCcEEEeecCC-CcEEEEEecc-cccEEEEEECCCCCEEEEec--CCCcEEE--E
Q psy4391 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-GKFEKTISGH-KLGISDVAWSSDSRLLVSGS--DDKTLKI--W 96 (231)
Q Consensus 23 ~~~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~-~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~--~~g~i~~--~ 96 (231)
+..|...|.+++|+|+|++|++++ ++.|.+|+..+ ++.......+ ...+.+++|+|+++++++++ .++...+ +
T Consensus 37 ~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~ 115 (297)
T 2ojh_A 37 VWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLL 115 (297)
T ss_dssp EEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEE
T ss_pred eccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEE
Confidence 446788999999999999999876 78999999988 7666555444 35678899999999999888 3344444 5
Q ss_pred eCCCceeeeeecCCCcceEEEEECCCCCEEE-EeecCCcEEEEECCC-CceeeeccCCCCCeEEEEEcCCCCeEEEEe-c
Q psy4391 97 ELSSGKCLKTLKGHSNYVFCCNFNPQSNLIV-SGSFDESVRIWDVRT-GKCLKTLPAHSDPVSAVHFNRDGSLIVSSS-Y 173 (231)
Q Consensus 97 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~v~d~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~ 173 (231)
+..+++ ...+..+ ..+..+.|+|+++.++ ++..++.+++|+++. +.....+..+...+.+++|+|++++++.++ .
T Consensus 116 ~~~~~~-~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~ 193 (297)
T 2ojh_A 116 PSTGGT-PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSR 193 (297)
T ss_dssp ETTCCC-CEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECT
T ss_pred ECCCCc-eEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecC
Confidence 555544 3334333 3477889999999887 677889889988532 223455666778899999999999888666 5
Q ss_pred CCeEEEEeCC-CCceeeeeecCCCCCeEEEEECCCCCEEEEEeCC-----------CeEEEEeCCC
Q psy4391 174 DGLCRIWDTA-SGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD-----------NTLKLWDSYP 227 (231)
Q Consensus 174 dg~i~v~d~~-~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d-----------~~v~vwd~~~ 227 (231)
++.+.+|++. .+.....+. .+...+..++|+|+|++|++++.+ +.|.+||...
T Consensus 194 ~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~ 258 (297)
T 2ojh_A 194 TGQMQIWRVRVDGSSVERIT-DSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDG 258 (297)
T ss_dssp TSSCEEEEEETTSSCEEECC-CCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTS
T ss_pred CCCccEEEECCCCCCcEEEe-cCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCC
Confidence 8888888775 333344333 334467789999999999988876 5699999643
No 131
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.92 E-value=4.6e-23 Score=173.79 Aligned_cols=197 Identities=14% Similarity=0.173 Sum_probs=154.1
Q ss_pred ccceEEEEECCCCCEEEEEeC-CC-----cEEEeecCCCcEEEEEecccc------------------------cEEEEE
Q psy4391 27 TKAVSSVKFSPNGEWLASSSA-DK-----LIKIWGAYDGKFEKTISGHKL------------------------GISDVA 76 (231)
Q Consensus 27 ~~~i~~~~~~~~~~~l~~~~~-dg-----~i~i~~~~~~~~~~~~~~~~~------------------------~v~~~~ 76 (231)
...+..++|+|||++|++++. |+ .|++|+..+++....+..+.. .+..++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 456899999999999999887 88 899999988877666654332 367899
Q ss_pred ECCCCCEEEEecCCCcEEEEeCCCce--eeeeecCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeeccCCCC
Q psy4391 77 WSSDSRLLVSGSDDKTLKIWELSSGK--CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSD 154 (231)
Q Consensus 77 ~~~~~~~l~~~~~~g~i~~~d~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~ 154 (231)
|+|||++|++++. +.|++||+.++. ....+..+...+..+.|+|+|+.|+.++. +.|++||+.+++.......+..
T Consensus 116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g~~~~~~~~~~~ 193 (741)
T 2ecf_A 116 WSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASGRQMQLTADGST 193 (741)
T ss_dssp ECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTTTEEEECCCCCCS
T ss_pred ECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeC-CcEEEEecCCCCEEEeccCCcc
Confidence 9999999998876 899999999872 34455566677899999999999998874 6899999998876544433332
Q ss_pred C----------------eEEEEEcCCCCeEEEEecCC---------------------------------eEEEEeCCC-
Q psy4391 155 P----------------VSAVHFNRDGSLIVSSSYDG---------------------------------LCRIWDTAS- 184 (231)
Q Consensus 155 ~----------------v~~~~~~~~~~~l~~~~~dg---------------------------------~i~v~d~~~- 184 (231)
. +..++|+|||++|++++.|+ .|.+||+.+
T Consensus 194 ~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~ 273 (741)
T 2ecf_A 194 TIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQ 273 (741)
T ss_dssp SEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTT
T ss_pred ceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCC
Confidence 2 46799999999999987765 788999988
Q ss_pred Cceeeeeec-CCCCCeEEEEECCCCCEEEEEeC-----CCeEEEEeCC
Q psy4391 185 GQCLKTLID-DDNPPVSFVKFSPNGKYILAATL-----DNTLKLWDSY 226 (231)
Q Consensus 185 ~~~~~~~~~-~~~~~i~~~~~s~~g~~l~~~s~-----d~~v~vwd~~ 226 (231)
++....... .+...+..++| |||++|++++. +..|.+||..
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~ 320 (741)
T 2ecf_A 274 AQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLA 320 (741)
T ss_dssp CCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETT
T ss_pred CceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECC
Confidence 765433222 23456788999 99999998764 5689999864
No 132
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.91 E-value=1.3e-21 Score=150.81 Aligned_cols=200 Identities=10% Similarity=0.045 Sum_probs=159.8
Q ss_pred cccceEEEEECCCCCEEEEEeC-------CCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEE-EecCCCcEEEEe
Q psy4391 26 HTKAVSSVKFSPNGEWLASSSA-------DKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV-SGSDDKTLKIWE 97 (231)
Q Consensus 26 h~~~i~~~~~~~~~~~l~~~~~-------dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~~g~i~~~d 97 (231)
....+..++|+|+|+++++++. ++.|.+||..+++....+... ..+..++|+|++++++ +...++.|.+||
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~~~~v~~~d 117 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHND-LKPFGATINNTTQTLWFGNTVNSAVTAID 117 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEES-SCCCSEEEETTTTEEEEEETTTTEEEEEE
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecC-CCcceEEECCCCCEEEEEecCCCEEEEEe
Confidence 3457889999999998887764 568999999988877777543 3467789999999654 555578999999
Q ss_pred CCCceeeeeecCCCc---------ceEEEEECCCCCEEEEee--cCCcEEEEECCCCceeeeccCCCCCeEEEEEcCCCC
Q psy4391 98 LSSGKCLKTLKGHSN---------YVFCCNFNPQSNLIVSGS--FDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGS 166 (231)
Q Consensus 98 ~~~~~~~~~~~~~~~---------~v~~~~~~~~~~~l~~~~--~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~ 166 (231)
.++++....+..+.. .+..+.++|+++.+++++ .++.|.+||+++++.+..+..+...+..++|+|+++
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~ 197 (353)
T 3vgz_A 118 AKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGK 197 (353)
T ss_dssp TTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTT
T ss_pred CCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCC
Confidence 999887777665332 267899999999887776 478899999999988877764555678899999999
Q ss_pred eEEEEecCCeEEEEeCCCCceeeeeecC---CCCCeEEEEECCCCCEEEEEeCC-CeEEEEeCC
Q psy4391 167 LIVSSSYDGLCRIWDTASGQCLKTLIDD---DNPPVSFVKFSPNGKYILAATLD-NTLKLWDSY 226 (231)
Q Consensus 167 ~l~~~~~dg~i~v~d~~~~~~~~~~~~~---~~~~i~~~~~s~~g~~l~~~s~d-~~v~vwd~~ 226 (231)
++++++.++.+.+||+.+++....+... ....+..++|+|+|+++++++.+ +.|.+||..
T Consensus 198 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~ 261 (353)
T 3vgz_A 198 RLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTR 261 (353)
T ss_dssp EEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETT
T ss_pred EEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECC
Confidence 9999999999999999999877665542 23346779999999988777654 899999974
No 133
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.91 E-value=1.9e-21 Score=148.89 Aligned_cols=198 Identities=12% Similarity=0.096 Sum_probs=147.6
Q ss_pred ccccceEEEEECCCCCEEEEEeC-CCcEEEeecCCCcE-EEEEecccccEEEEEECCCCCEEEEecCCC---cEEEEeCC
Q psy4391 25 GHTKAVSSVKFSPNGEWLASSSA-DKLIKIWGAYDGKF-EKTISGHKLGISDVAWSSDSRLLVSGSDDK---TLKIWELS 99 (231)
Q Consensus 25 ~h~~~i~~~~~~~~~~~l~~~~~-dg~i~i~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g---~i~~~d~~ 99 (231)
.+...+ .++|+|+|+++++++. ++.|.+||..+++. ...+..+..+..+++|+|++++++++..++ .|.+||+.
T Consensus 38 ~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~ 116 (331)
T 3u4y_A 38 LGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFL 116 (331)
T ss_dssp CCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETT
T ss_pred ccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECC
Confidence 344556 9999999997766555 88999999988876 566655554444489999999998665553 89999999
Q ss_pred CceeeeeecCCCcceEEEEECCCCCEEEEe-ecCCc-EEEEECCCCcee----eeccCCCCCeEEEEEcCCCCeEEEE-e
Q psy4391 100 SGKCLKTLKGHSNYVFCCNFNPQSNLIVSG-SFDES-VRIWDVRTGKCL----KTLPAHSDPVSAVHFNRDGSLIVSS-S 172 (231)
Q Consensus 100 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~-i~v~d~~~~~~~----~~~~~~~~~v~~~~~~~~~~~l~~~-~ 172 (231)
+++.+..+..+ .....++|+|+|+.++++ ..++. +.+|++.....+ .........+..++|+|++++++++ .
T Consensus 117 ~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~ 195 (331)
T 3u4y_A 117 KNKFISTIPIP-YDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANL 195 (331)
T ss_dssp TTEEEEEEECC-TTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEET
T ss_pred CCCeEEEEECC-CCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeC
Confidence 98887777654 346789999999866555 55588 999998754332 1112334567899999999966554 4
Q ss_pred cCCeEEEEeCCCCce---eeeeecCCCCCeEEEEECCCCCEEEEEeC-CCeEEEEeCC
Q psy4391 173 YDGLCRIWDTASGQC---LKTLIDDDNPPVSFVKFSPNGKYILAATL-DNTLKLWDSY 226 (231)
Q Consensus 173 ~dg~i~v~d~~~~~~---~~~~~~~~~~~i~~~~~s~~g~~l~~~s~-d~~v~vwd~~ 226 (231)
.++.|.+||+.+++. +..+... ..+..++|+|+|++|++++. ++.|.+||..
T Consensus 196 ~~~~v~v~d~~~~~~~~~~~~~~~~--~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~ 251 (331)
T 3u4y_A 196 IGNSIGILETQNPENITLLNAVGTN--NLPGTIVVSRDGSTVYVLTESTVDVFNFNQL 251 (331)
T ss_dssp TTTEEEEEECSSTTSCEEEEEEECS--SCCCCEEECTTSSEEEEECSSEEEEEEEETT
T ss_pred CCCeEEEEECCCCcccceeeeccCC--CCCceEEECCCCCEEEEEEcCCCEEEEEECC
Confidence 688999999998887 5555432 34567899999998877654 7799999964
No 134
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.91 E-value=1.8e-21 Score=150.11 Aligned_cols=196 Identities=8% Similarity=0.059 Sum_probs=156.5
Q ss_pred cceEEEEECCCCCEEEE-EeCCCcEEEeecCCCcEEEEEecccc---------cEEEEEECCCCCEEEEec--CCCcEEE
Q psy4391 28 KAVSSVKFSPNGEWLAS-SSADKLIKIWGAYDGKFEKTISGHKL---------GISDVAWSSDSRLLVSGS--DDKTLKI 95 (231)
Q Consensus 28 ~~i~~~~~~~~~~~l~~-~~~dg~i~i~~~~~~~~~~~~~~~~~---------~v~~~~~~~~~~~l~~~~--~~g~i~~ 95 (231)
..+..++|+|+|++++. ...++.|.+||..+++....+..+.. .+..++|+|+++.+++++ .++.|.+
T Consensus 89 ~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~ 168 (353)
T 3vgz_A 89 LKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWV 168 (353)
T ss_dssp SCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEE
T ss_pred CCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEE
Confidence 34678999999996654 45578999999998888777664322 268899999999877765 4788999
Q ss_pred EeCCCceeeeeecCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeeccC----CCCCeEEEEEcCCCCeEEEE
Q psy4391 96 WELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPA----HSDPVSAVHFNRDGSLIVSS 171 (231)
Q Consensus 96 ~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~ 171 (231)
||..+++....+..+...+..+.|+|+++.+++++.++.+.+||+.+++....+.. +...+..++|+|++++++++
T Consensus 169 ~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 248 (353)
T 3vgz_A 169 VDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFIT 248 (353)
T ss_dssp EETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEE
T ss_pred EcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEE
Confidence 99999988887764455567889999999999999999999999999987766554 34567889999999987766
Q ss_pred ec-CCeEEEEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEe-CCCeEEEEeCC
Q psy4391 172 SY-DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT-LDNTLKLWDSY 226 (231)
Q Consensus 172 ~~-dg~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s-~d~~v~vwd~~ 226 (231)
+. ++.|.+||+.+++.+..+..... ..++|+|+|++++++. .++.|.+||..
T Consensus 249 ~~~~~~v~~~d~~~~~~~~~~~~~~~---~~~~~s~dg~~l~v~~~~~~~v~~~d~~ 302 (353)
T 3vgz_A 249 DSKAAEVLVVDTRNGNILAKVAAPES---LAVLFNPARNEAYVTHRQAGKVSVIDAK 302 (353)
T ss_dssp ESSSSEEEEEETTTCCEEEEEECSSC---CCEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred eCCCCEEEEEECCCCcEEEEEEcCCC---ceEEECCCCCEEEEEECCCCeEEEEECC
Confidence 65 48999999999987776654332 4588999999776666 68999999964
No 135
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.91 E-value=7.7e-22 Score=160.77 Aligned_cols=192 Identities=14% Similarity=0.105 Sum_probs=154.8
Q ss_pred EECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEecCCCcEEEEeC--CCceeeeeecCCC
Q psy4391 34 KFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWEL--SSGKCLKTLKGHS 111 (231)
Q Consensus 34 ~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~--~~~~~~~~~~~~~ 111 (231)
.++|++.+++++..++.|.+||..+++....+..+.. +..++|+|+++++++++.++.|.+||+ .+++.+..+.. .
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~-g 221 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI-G 221 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC-C
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEec-C
Confidence 4889998899999999999999999998888874333 889999999999999999999999999 78888888774 4
Q ss_pred cceEEEEECC----CCCEEEEeec-CCcEEEEECCCCceeeeccCC-----------CCCeEEEEEcCCCCe-EEEEecC
Q psy4391 112 NYVFCCNFNP----QSNLIVSGSF-DESVRIWDVRTGKCLKTLPAH-----------SDPVSAVHFNRDGSL-IVSSSYD 174 (231)
Q Consensus 112 ~~v~~~~~~~----~~~~l~~~~~-d~~i~v~d~~~~~~~~~~~~~-----------~~~v~~~~~~~~~~~-l~~~~~d 174 (231)
..+..++|+| +|+++++++. ++.|.+||..+++.+..+..+ ...+.++.++|++.. +++...+
T Consensus 222 ~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~ 301 (543)
T 1nir_A 222 IEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKET 301 (543)
T ss_dssp SEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTT
T ss_pred CCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCC
Confidence 4578999999 9999999884 899999999999887776542 226889999997765 4566778
Q ss_pred CeEEEEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEe-CCCeEEEEeCCC
Q psy4391 175 GLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT-LDNTLKLWDSYP 227 (231)
Q Consensus 175 g~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s-~d~~v~vwd~~~ 227 (231)
+.|.+||..+.+.+..........+..++|+|+|++|++++ .++.|.+||...
T Consensus 302 g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~t 355 (543)
T 1nir_A 302 GKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKD 355 (543)
T ss_dssp TEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTT
T ss_pred CeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCC
Confidence 99999999886654421112233456789999999877655 588999999743
No 136
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.90 E-value=2.6e-22 Score=159.42 Aligned_cols=159 Identities=12% Similarity=0.112 Sum_probs=128.6
Q ss_pred cccceEEEEECCCCCEEE----EEeCCCcEEEeecCCC--------c---EEEEEecccccEEEEEECCC-CCEEEEecC
Q psy4391 26 HTKAVSSVKFSPNGEWLA----SSSADKLIKIWGAYDG--------K---FEKTISGHKLGISDVAWSSD-SRLLVSGSD 89 (231)
Q Consensus 26 h~~~i~~~~~~~~~~~l~----~~~~dg~i~i~~~~~~--------~---~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~ 89 (231)
|...|.+++|+|+|++|+ +|+.|+.|++||+.+. + ....+.+|...|.+++|+|+ +.++++++.
T Consensus 91 ~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~ 170 (434)
T 2oit_A 91 MKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLA 170 (434)
T ss_dssp CSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEET
T ss_pred CCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEEC
Confidence 556799999999999999 7888999999997543 1 13445668889999999997 789999999
Q ss_pred CCcEEEEeCCCceeeeeecCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeeccCC-------CCCeEEEEEc
Q psy4391 90 DKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAH-------SDPVSAVHFN 162 (231)
Q Consensus 90 ~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~-------~~~v~~~~~~ 162 (231)
||.|++||++++........|...+.+++|+|+|++|++|+.|+.|++||++ ++....+..+ ...+.+++|+
T Consensus 171 Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~ 249 (434)
T 2oit_A 171 DGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWI 249 (434)
T ss_dssp TSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEE
T ss_pred CCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEe
Confidence 9999999999887666666677889999999999999999999999999998 5444444332 2378999999
Q ss_pred CCCCeEEEE-ecCC------eEEEEeCCCC
Q psy4391 163 RDGSLIVSS-SYDG------LCRIWDTASG 185 (231)
Q Consensus 163 ~~~~~l~~~-~~dg------~i~v~d~~~~ 185 (231)
+++.++++. ..+| .+++|++...
T Consensus 250 ~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 250 GTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp ETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred cCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 988777543 3343 3889999865
No 137
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.90 E-value=3.7e-21 Score=147.53 Aligned_cols=200 Identities=12% Similarity=0.230 Sum_probs=144.7
Q ss_pred ccccceEEEEECCCCCEEEEEeCC-CcEEEeecC--CCcEE--EEEecccccEEEEEECCCCCEEEEec-CCCcEEEEeC
Q psy4391 25 GHTKAVSSVKFSPNGEWLASSSAD-KLIKIWGAY--DGKFE--KTISGHKLGISDVAWSSDSRLLVSGS-DDKTLKIWEL 98 (231)
Q Consensus 25 ~h~~~i~~~~~~~~~~~l~~~~~d-g~i~i~~~~--~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~-~~g~i~~~d~ 98 (231)
.|...+.+++|+|+|++|++++.+ +.|.+|++. ++... ..+..+. .+..++|+|+++++++++ .++.|.+||+
T Consensus 35 ~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~ 113 (343)
T 1ri6_A 35 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRL 113 (343)
T ss_dssp ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEEC
Confidence 466788899999999988888776 899999987 44432 3333333 678899999999886665 4788999999
Q ss_pred C---CceeeeeecCCCcceEEEEECCCCCEEEEee-cCCcEEEEECCC-Cceee----eccC-CCCCeEEEEEcCCCCeE
Q psy4391 99 S---SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS-FDESVRIWDVRT-GKCLK----TLPA-HSDPVSAVHFNRDGSLI 168 (231)
Q Consensus 99 ~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~v~d~~~-~~~~~----~~~~-~~~~v~~~~~~~~~~~l 168 (231)
. ..+....+..+ ..+.+++|+|+++.+++++ .++.|++||+.+ ++... .... ....+..++|+|+++++
T Consensus 114 ~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l 192 (343)
T 1ri6_A 114 EDGLPVGVVDVVEGL-DGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYA 192 (343)
T ss_dssp ETTEEEEEEEEECCC-TTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEE
T ss_pred CCCccccccccccCC-CCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEE
Confidence 3 34444444433 3477889999999888887 889999999987 54321 2222 23478889999999977
Q ss_pred EEEe-cCCeEEEEeCCC--Cce--eeeeecC-----CCCCeEEEEECCCCCEEEEEe-CCCeEEEEeCC
Q psy4391 169 VSSS-YDGLCRIWDTAS--GQC--LKTLIDD-----DNPPVSFVKFSPNGKYILAAT-LDNTLKLWDSY 226 (231)
Q Consensus 169 ~~~~-~dg~i~v~d~~~--~~~--~~~~~~~-----~~~~i~~~~~s~~g~~l~~~s-~d~~v~vwd~~ 226 (231)
++++ .++.+.+||+.. ++. ....... ....+..++|+|+|++|+++. .++.|.+||..
T Consensus 193 ~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~ 261 (343)
T 1ri6_A 193 YCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVS 261 (343)
T ss_dssp EEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred EEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEc
Confidence 6554 789999999953 332 1222111 122456799999999887554 68999999975
No 138
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.90 E-value=6.2e-21 Score=145.96 Aligned_cols=192 Identities=11% Similarity=0.087 Sum_probs=149.5
Q ss_pred ceEEEEECCCCCEEE-EEeCCCcEEEeecCCCcEEEEEecc-----cccEEEEEECCCCCEEEEec------------CC
Q psy4391 29 AVSSVKFSPNGEWLA-SSSADKLIKIWGAYDGKFEKTISGH-----KLGISDVAWSSDSRLLVSGS------------DD 90 (231)
Q Consensus 29 ~i~~~~~~~~~~~l~-~~~~dg~i~i~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~------------~~ 90 (231)
.+..++|+|+|+.++ ++..++.|.+||..+++....+... ...+..++|+|++++++++. .+
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~ 114 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQP 114 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECC
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccC
Confidence 478899999998764 5556789999999888877666532 12466789999999988885 57
Q ss_pred CcEEEEeCCCceeeeeecCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeeccCCC-----------------
Q psy4391 91 KTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHS----------------- 153 (231)
Q Consensus 91 g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~----------------- 153 (231)
+.|.+||+.+++....+.. ...+..+.|+|+++.++++ ++.|++||+.+++....+..+.
T Consensus 115 ~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 191 (337)
T 1pby_B 115 TRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQ 191 (337)
T ss_dssp CEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCC
T ss_pred ceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeee
Confidence 9999999999887776654 3446678899999988877 6889999998876554332111
Q ss_pred -------------------------------------------------CCeEEEEEcCCCCeEEEEecCCeEEEEeCCC
Q psy4391 154 -------------------------------------------------DPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 184 (231)
Q Consensus 154 -------------------------------------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~ 184 (231)
..+..++|+|++++++++ ++.|.+||+.+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~ 269 (337)
T 1pby_B 192 HESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEK 269 (337)
T ss_dssp CTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTT
T ss_pred ccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCC
Confidence 123458999999999888 79999999999
Q ss_pred CceeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCC
Q psy4391 185 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSYP 227 (231)
Q Consensus 185 ~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~~~ 227 (231)
++.+..+... ..+..++|+|+|++|++++.++.|.+||...
T Consensus 270 ~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~ 310 (337)
T 1pby_B 270 NASIKRVPLP--HSYYSVNVSTDGSTVWLGGALGDLAAYDAET 310 (337)
T ss_dssp TEEEEEEECS--SCCCEEEECTTSCEEEEESBSSEEEEEETTT
T ss_pred CcCcceecCC--CceeeEEECCCCCEEEEEcCCCcEEEEECcC
Confidence 8877665433 2356789999999999999999999999743
No 139
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.90 E-value=4.4e-23 Score=173.45 Aligned_cols=195 Identities=11% Similarity=0.140 Sum_probs=149.9
Q ss_pred ceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecccc---cEEEEEECCCCCEEEEecCC---------CcEEEE
Q psy4391 29 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKL---GISDVAWSSDSRLLVSGSDD---------KTLKIW 96 (231)
Q Consensus 29 ~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~~---------g~i~~~ 96 (231)
.+.+++|+|||+++++ +.||.|++||..+++....+..+.. .+..++|+|||++|++++.+ +.+++|
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~ 96 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLS 96 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEE
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEE
Confidence 4678899999997766 7899999999998887777766554 48899999999999988764 678899
Q ss_pred eCCCceeeeeec---CCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeeccCCCCCe-----------------
Q psy4391 97 ELSSGKCLKTLK---GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPV----------------- 156 (231)
Q Consensus 97 d~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v----------------- 156 (231)
|+.+++. ..+. .+...+..++|+|+|+.|+.++. +.|++||+.+++.......+...+
T Consensus 97 d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~ 174 (723)
T 1xfd_A 97 KIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKT 174 (723)
T ss_dssp ESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSS
T ss_pred ECCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccC
Confidence 9998775 2332 23334677899999999999886 789999999887655544433333
Q ss_pred -EEEEEcCCCCeEEEEecCC----------------------------------eEEEEeCCCCceeeeeecC-----CC
Q psy4391 157 -SAVHFNRDGSLIVSSSYDG----------------------------------LCRIWDTASGQCLKTLIDD-----DN 196 (231)
Q Consensus 157 -~~~~~~~~~~~l~~~~~dg----------------------------------~i~v~d~~~~~~~~~~~~~-----~~ 196 (231)
.+++|+|||+.|++++.++ .|.+||+.+++....+... ..
T Consensus 175 ~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~ 254 (723)
T 1xfd_A 175 HIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMRE 254 (723)
T ss_dssp SEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSS
T ss_pred cceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCcc
Confidence 7899999999999887553 7999999888754444322 13
Q ss_pred CCeEEEEECCCCCEEEEEeC----CCeEEEEeCC
Q psy4391 197 PPVSFVKFSPNGKYILAATL----DNTLKLWDSY 226 (231)
Q Consensus 197 ~~i~~~~~s~~g~~l~~~s~----d~~v~vwd~~ 226 (231)
..+..++|+|||++|++.+. +..|.+||..
T Consensus 255 ~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~ 288 (723)
T 1xfd_A 255 YYITMVKWATSTKVAVTWLNRAQNVSILTLCDAT 288 (723)
T ss_dssp EEEEEEEESSSSEEEEEEEETTSCEEEEEEEETT
T ss_pred ceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCC
Confidence 45788999999998877653 3579999964
No 140
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.89 E-value=1.1e-20 Score=144.85 Aligned_cols=194 Identities=15% Similarity=0.288 Sum_probs=137.9
Q ss_pred ceEEEEECCCCCEEEEEeC-CCcEEEeecCCC---cEEEEEecccccEEEEEECCCCCEEEEec-CCCcEEEEeCCC-ce
Q psy4391 29 AVSSVKFSPNGEWLASSSA-DKLIKIWGAYDG---KFEKTISGHKLGISDVAWSSDSRLLVSGS-DDKTLKIWELSS-GK 102 (231)
Q Consensus 29 ~i~~~~~~~~~~~l~~~~~-dg~i~i~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~g~i~~~d~~~-~~ 102 (231)
.+..++|+|+|+++++++. ++.|.+|+..++ .....+.. ...+..++|+|+++++++++ .++.|.+||+.+ ++
T Consensus 85 ~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~ 163 (343)
T 1ri6_A 85 SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEG-LDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGH 163 (343)
T ss_dssp CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECC-CTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSC
T ss_pred CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccC-CCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCc
Confidence 7889999999998876654 788999998433 23333333 34578899999999888776 889999999987 54
Q ss_pred eee----eecC-CCcceEEEEECCCCCEEEEee-cCCcEEEEECCC--Cce--eeec---cCC---CCCeEEEEEcCCCC
Q psy4391 103 CLK----TLKG-HSNYVFCCNFNPQSNLIVSGS-FDESVRIWDVRT--GKC--LKTL---PAH---SDPVSAVHFNRDGS 166 (231)
Q Consensus 103 ~~~----~~~~-~~~~v~~~~~~~~~~~l~~~~-~d~~i~v~d~~~--~~~--~~~~---~~~---~~~v~~~~~~~~~~ 166 (231)
... .+.. ....+..+.|+|++++++.++ .++.+.+||++. ++. .... ... ...+..++|+|+++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~ 243 (343)
T 1ri6_A 164 LVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGR 243 (343)
T ss_dssp EEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSS
T ss_pred eeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCC
Confidence 322 2222 234677899999999776554 789999999954 322 1111 111 23567899999999
Q ss_pred eEEE-EecCCeEEEEeCC--CC--ceeeeeecCCCCCeEEEEECCCCCEEEEEe-CCCeEEEEeC
Q psy4391 167 LIVS-SSYDGLCRIWDTA--SG--QCLKTLIDDDNPPVSFVKFSPNGKYILAAT-LDNTLKLWDS 225 (231)
Q Consensus 167 ~l~~-~~~dg~i~v~d~~--~~--~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s-~d~~v~vwd~ 225 (231)
++++ +..++.|.+||+. ++ +.+..+... . .+..++|+|+|++|++++ .++.|.+|+.
T Consensus 244 ~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~-~-~~~~~~~s~dg~~l~~~~~~~~~v~v~~~ 306 (343)
T 1ri6_A 244 HLYACDRTASLITVFSVSEDGSVLSKEGFQPTE-T-QPRGFNVDHSGKYLIAAGQKSHHISVYEI 306 (343)
T ss_dssp EEEEEETTTTEEEEEEECTTSCCEEEEEEEECS-S-SCCCEEECTTSSEEEEECTTTCEEEEEEE
T ss_pred EEEEEecCCCEEEEEEEcCCCCceEEeeeecCC-C-ccceEEECCCCCEEEEecCCCCeEEEEEE
Confidence 8874 4478999999998 32 233333222 2 266799999999998888 5799999954
No 141
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.89 E-value=4.7e-22 Score=167.65 Aligned_cols=194 Identities=12% Similarity=0.077 Sum_probs=149.8
Q ss_pred ceEEEEECCCCCEEEEEeCCCcEEEeecCCCc--EEEEEecccccEEEEEECCCCCEEEEecCCCcEEEEeCCCceeeee
Q psy4391 29 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGK--FEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKT 106 (231)
Q Consensus 29 ~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~ 106 (231)
.|.+++|+|||++|++++. +.|.+|+..++. ....+..+...+..++|+|||++|++++. +.|++||+.+++..+.
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g~~~~~ 187 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASGRQMQL 187 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTTTEEEEC
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeC-CcEEEEecCCCCEEEe
Confidence 3789999999999998875 999999998762 33445566677999999999999988874 6899999998876554
Q ss_pred ecCCCcc----------------eEEEEECCCCCEEEEeecCC---------------------------------cEEE
Q psy4391 107 LKGHSNY----------------VFCCNFNPQSNLIVSGSFDE---------------------------------SVRI 137 (231)
Q Consensus 107 ~~~~~~~----------------v~~~~~~~~~~~l~~~~~d~---------------------------------~i~v 137 (231)
...+... +..+.|+|||+.|++++.|+ .|++
T Consensus 188 ~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~ 267 (741)
T 2ecf_A 188 TADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGV 267 (741)
T ss_dssp CCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEE
T ss_pred ccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEE
Confidence 4433221 35689999999999987765 7889
Q ss_pred EECCC-Cceeeecc--CCCCCeEEEEEcCCCCeEEEEec-----CCeEEEEeCCCCceeeeeecCCCC---CeEEEEECC
Q psy4391 138 WDVRT-GKCLKTLP--AHSDPVSAVHFNRDGSLIVSSSY-----DGLCRIWDTASGQCLKTLIDDDNP---PVSFVKFSP 206 (231)
Q Consensus 138 ~d~~~-~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~-----dg~i~v~d~~~~~~~~~~~~~~~~---~i~~~~~s~ 206 (231)
||+.+ ++...... .+...+..++| |||++|++++. +..|.+||+.+++....+...... .+..++|+|
T Consensus 268 ~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~sp 346 (741)
T 2ecf_A 268 ISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLD 346 (741)
T ss_dssp ECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECT
T ss_pred EECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECC
Confidence 99988 76544332 35667899999 99999987654 468999999998866554433322 335688999
Q ss_pred CCCEEEEEeCCCeEEEEeC
Q psy4391 207 NGKYILAATLDNTLKLWDS 225 (231)
Q Consensus 207 ~g~~l~~~s~d~~v~vwd~ 225 (231)
||+++++++.||.++||..
T Consensus 347 dg~~~~~~~~~g~~~l~~~ 365 (741)
T 2ecf_A 347 DGSILWSSERTGFQHLYRI 365 (741)
T ss_dssp TSCEEEEECTTSSCEEEEE
T ss_pred CCeEEEEecCCCccEEEEE
Confidence 9998888888998888864
No 142
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.89 E-value=1.8e-20 Score=152.66 Aligned_cols=195 Identities=12% Similarity=0.080 Sum_probs=151.1
Q ss_pred eEEEEECCCCCEEEEEeCCCcEEEeec--CCCcEEEEEecccccEEEEEECC----CCCEEEEecC-CCcEEEEeCCCce
Q psy4391 30 VSSVKFSPNGEWLASSSADKLIKIWGA--YDGKFEKTISGHKLGISDVAWSS----DSRLLVSGSD-DKTLKIWELSSGK 102 (231)
Q Consensus 30 i~~~~~~~~~~~l~~~~~dg~i~i~~~--~~~~~~~~~~~~~~~v~~~~~~~----~~~~l~~~~~-~g~i~~~d~~~~~ 102 (231)
+..++|+|+|++|++++.|+.|++||. .+++....+.. ...+..++|+| +|+++++++. ++.|.+||..+++
T Consensus 181 ~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~-g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~ 259 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI-GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLE 259 (543)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCC
T ss_pred cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEec-CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccc
Confidence 789999999999999999999999999 77777777764 44678999999 9999988874 8999999999998
Q ss_pred eeeeecCC-----------CcceEEEEECCCCCE-EEEeecCCcEEEEECCCCceee--eccCCCCCeEEEEEcCCCCeE
Q psy4391 103 CLKTLKGH-----------SNYVFCCNFNPQSNL-IVSGSFDESVRIWDVRTGKCLK--TLPAHSDPVSAVHFNRDGSLI 168 (231)
Q Consensus 103 ~~~~~~~~-----------~~~v~~~~~~~~~~~-l~~~~~d~~i~v~d~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l 168 (231)
.+..+..+ ...+..+.++|++.. +++...++.|.+||+.+.+.+. .+. +...+..+.|+|+++++
T Consensus 260 ~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~-~~~~~~~~~~spdg~~l 338 (543)
T 1nir_A 260 PKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIG-AAPFLHDGGWDSSHRYF 338 (543)
T ss_dssp EEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEE-CCSSCCCEEECTTSCEE
T ss_pred cceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEec-cCcCccCceECCCCCEE
Confidence 88777542 226788999997654 5566778999999998765443 333 34567789999999987
Q ss_pred EEEe-cCCeEEEEeCCCCceeeeeecC---CCCCeEEEEECCC-CCEEEEEe-CCCeEEEEeCCC
Q psy4391 169 VSSS-YDGLCRIWDTASGQCLKTLIDD---DNPPVSFVKFSPN-GKYILAAT-LDNTLKLWDSYP 227 (231)
Q Consensus 169 ~~~~-~dg~i~v~d~~~~~~~~~~~~~---~~~~i~~~~~s~~-g~~l~~~s-~d~~v~vwd~~~ 227 (231)
++++ .++.|.+||+.+++++..+... +......+ ++|+ |+.++++. .|+.|.+||..+
T Consensus 339 ~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~ 402 (543)
T 1nir_A 339 MTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDP 402 (543)
T ss_dssp EEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred EEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCC
Confidence 7655 5889999999999987776532 21122222 5787 56666665 579999999865
No 143
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.89 E-value=9.6e-22 Score=165.30 Aligned_cols=194 Identities=10% Similarity=0.137 Sum_probs=144.3
Q ss_pred ceEEEEECCCCCEEEEEeCC---------CcEEEeecCCCcEEEEEec---ccccEEEEEECCCCCEEEEecCCCcEEEE
Q psy4391 29 AVSSVKFSPNGEWLASSSAD---------KLIKIWGAYDGKFEKTISG---HKLGISDVAWSSDSRLLVSGSDDKTLKIW 96 (231)
Q Consensus 29 ~i~~~~~~~~~~~l~~~~~d---------g~i~i~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~~g~i~~~ 96 (231)
.|.+++|||||++|++++.+ +.+.+||..+++. ..+.. +...+..++|+|||+.|++++. +.|++|
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~ 139 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYC 139 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEE
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEE
Confidence 48999999999999988764 7788999988765 33332 2334778899999999998876 799999
Q ss_pred eCCCceeeeeecCCCcc------------------eEEEEECCCCCEEEEeecCC-------------------------
Q psy4391 97 ELSSGKCLKTLKGHSNY------------------VFCCNFNPQSNLIVSGSFDE------------------------- 133 (231)
Q Consensus 97 d~~~~~~~~~~~~~~~~------------------v~~~~~~~~~~~l~~~~~d~------------------------- 133 (231)
|+.+++..+....+... +..+.|+|||+.|++++.++
T Consensus 140 ~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (723)
T 1xfd_A 140 AHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYP 219 (723)
T ss_dssp SSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECC
T ss_pred ECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCC
Confidence 99988766555443322 26799999999999887543
Q ss_pred ---------cEEEEECCCCceeeeccCC------CCCeEEEEEcCCCCeEEEEec----CCeEEEEeCCCCceeeeeecC
Q psy4391 134 ---------SVRIWDVRTGKCLKTLPAH------SDPVSAVHFNRDGSLIVSSSY----DGLCRIWDTASGQCLKTLIDD 194 (231)
Q Consensus 134 ---------~i~v~d~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~----dg~i~v~d~~~~~~~~~~~~~ 194 (231)
.|++||+.+++....+..+ ...+..++|+|||+++++... +..|.+||+.+++....+...
T Consensus 220 ~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~ 299 (723)
T 1xfd_A 220 KAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDE 299 (723)
T ss_dssp BTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEE
T ss_pred CCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEec
Confidence 7899999988754555443 457889999999998876643 357999999998865544333
Q ss_pred CCCCe----EEEEECCCCCEEEEE--eCCC------eEEEEe
Q psy4391 195 DNPPV----SFVKFSPNGKYILAA--TLDN------TLKLWD 224 (231)
Q Consensus 195 ~~~~i----~~~~~s~~g~~l~~~--s~d~------~v~vwd 224 (231)
....+ ..++|+|||+.|+.. ..++ .|.+||
T Consensus 300 ~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d 341 (723)
T 1xfd_A 300 SEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSS 341 (723)
T ss_dssp CSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEEC
T ss_pred cCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEe
Confidence 22222 257899999987764 4566 577777
No 144
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.88 E-value=2.4e-21 Score=168.97 Aligned_cols=194 Identities=12% Similarity=0.097 Sum_probs=160.0
Q ss_pred cccceEEEEEC-CCCCEEEEEeCCCcEEEeecCCCcEEEEEecccc-cEEEEEECCCCCEEEEecCCCcEE-EEeCCCce
Q psy4391 26 HTKAVSSVKFS-PNGEWLASSSADKLIKIWGAYDGKFEKTISGHKL-GISDVAWSSDSRLLVSGSDDKTLK-IWELSSGK 102 (231)
Q Consensus 26 h~~~i~~~~~~-~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~~g~i~-~~d~~~~~ 102 (231)
|...+.+++|+ |+|++|+.++ ++.+.+|+..++... .+..+.. .+..++|+ +|+.+++++.+..+. +|++.+++
T Consensus 294 ~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~ 370 (1045)
T 1k32_A 294 SIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVL-KVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGK 370 (1045)
T ss_dssp ECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEE-ECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCC
T ss_pred cccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceE-EccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCC
Confidence 44578999999 9999998877 889999998776544 3555555 78999999 999999988888888 99998776
Q ss_pred eeeeecCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeEEEEecCC-------
Q psy4391 103 CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG------- 175 (231)
Q Consensus 103 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg------- 175 (231)
... +..+...+..++|+|+|+.|++++.++.|++||+.+++.......|.+.+..++|+|||++|++++.++
T Consensus 371 ~~~-l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~ 449 (1045)
T 1k32_A 371 AEK-FEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGY 449 (1045)
T ss_dssp EEE-CCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSC
T ss_pred ceE-ecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCC
Confidence 543 336667789999999999999999999999999999987777667888889999999999998887654
Q ss_pred ---eEEEEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeC
Q psy4391 176 ---LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225 (231)
Q Consensus 176 ---~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~ 225 (231)
.|++||+.+++ ...+. .+...+..++|+|||++|++++.++...+|+.
T Consensus 450 ~~~~i~l~d~~~g~-~~~l~-~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~ 500 (1045)
T 1k32_A 450 VMQAIHVYDMEGRK-IFAAT-TENSHDYAPAFDADSKNLYYLSYRSLDPSPDR 500 (1045)
T ss_dssp CEEEEEEEETTTTE-EEECS-CSSSBEEEEEECTTSCEEEEEESCCCCCEECS
T ss_pred CCCeEEEEECCCCc-EEEee-CCCcccCCceEcCCCCEEEEEecccCCcCcch
Confidence 89999999877 33333 33445677999999999999998888888874
No 145
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.88 E-value=3.1e-21 Score=144.74 Aligned_cols=189 Identities=20% Similarity=0.236 Sum_probs=140.5
Q ss_pred ccceEEEEECCCCCEEEEEe--CCCcEEEeec--CCCcEEEEEecccccEEEEEECCCCCEEE-EecCCCcEEEEeC--C
Q psy4391 27 TKAVSSVKFSPNGEWLASSS--ADKLIKIWGA--YDGKFEKTISGHKLGISDVAWSSDSRLLV-SGSDDKTLKIWEL--S 99 (231)
Q Consensus 27 ~~~i~~~~~~~~~~~l~~~~--~dg~i~i~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~~g~i~~~d~--~ 99 (231)
...+.+++|+|+|++|+++. .++...+|.. .++. ...+..+ ..+..++|+|+++.++ ++..++.+++|++ .
T Consensus 84 ~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~ 161 (297)
T 2ojh_A 84 TICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDID 161 (297)
T ss_dssp CCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETT
T ss_pred cccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECC
Confidence 36788999999999999888 3355566554 4443 3344433 3488899999999887 6778898888885 3
Q ss_pred CceeeeeecCCCcceEEEEECCCCCEEEEee-cCCcEEEEECC-CCceeeeccCCCCCeEEEEEcCCCCeEEEEecC---
Q psy4391 100 SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS-FDESVRIWDVR-TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD--- 174 (231)
Q Consensus 100 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~v~d~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--- 174 (231)
+++ ...+..+...+..+.|+|+++.++.++ .++.+++|++. .+.....+..+...+..++|+|++++|++++.+
T Consensus 162 ~~~-~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~ 240 (297)
T 2ojh_A 162 SGV-ETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADV 240 (297)
T ss_dssp TCC-EEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTC
T ss_pred CCc-ceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCC
Confidence 343 344555667789999999999888766 58899999876 455566677777788899999999999888765
Q ss_pred --------CeEEEEeCCCCceeeeee-cCCCCCeEEEEECCCCCEEEEEeCCC
Q psy4391 175 --------GLCRIWDTASGQCLKTLI-DDDNPPVSFVKFSPNGKYILAATLDN 218 (231)
Q Consensus 175 --------g~i~v~d~~~~~~~~~~~-~~~~~~i~~~~~s~~g~~l~~~s~d~ 218 (231)
+.|.+||+.+++...... ..+...+..++|+|+|++|++++.+.
T Consensus 241 ~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 241 FDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp CSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred CcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 569999998876533222 13344567789999999999888654
No 146
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.88 E-value=5.6e-20 Score=141.76 Aligned_cols=201 Identities=15% Similarity=0.180 Sum_probs=138.6
Q ss_pred ccccceEEEEECCCCCEEEEEeC---CCcEEEeecCCCcE--EEEEecccccEEEEEECCCCCEEEEec-CCCcEEEEeC
Q psy4391 25 GHTKAVSSVKFSPNGEWLASSSA---DKLIKIWGAYDGKF--EKTISGHKLGISDVAWSSDSRLLVSGS-DDKTLKIWEL 98 (231)
Q Consensus 25 ~h~~~i~~~~~~~~~~~l~~~~~---dg~i~i~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~g~i~~~d~ 98 (231)
.+......++|+|+|+ |++++. ++.|.+|++.++.. ...+..+...+..++|+|++++|++++ .++.+.+|++
T Consensus 37 ~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~ 115 (347)
T 3hfq_A 37 AATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKI 115 (347)
T ss_dssp EECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred eccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEe
Confidence 4456677899999999 555443 68999999976653 233334556678899999999888877 6789999999
Q ss_pred CC-c--eeeeeecCC---------CcceEEEEECCCCCEEEEeecCCcEEEEECC-CCceee--eccC-CCCCeEEEEEc
Q psy4391 99 SS-G--KCLKTLKGH---------SNYVFCCNFNPQSNLIVSGSFDESVRIWDVR-TGKCLK--TLPA-HSDPVSAVHFN 162 (231)
Q Consensus 99 ~~-~--~~~~~~~~~---------~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~-~~~~~~--~~~~-~~~~v~~~~~~ 162 (231)
.. + +.+..+... ...+.+++|+|+++++++...++.|.+||+. .++... .+.. ....+..++|+
T Consensus 116 ~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~s 195 (347)
T 3hfq_A 116 AADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFS 195 (347)
T ss_dssp CTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEEC
T ss_pred CCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEEC
Confidence 62 2 222333211 1247789999999966666678899999998 444321 1122 23367889999
Q ss_pred CCCCeEEE-EecCCeEEEEeCCC--Ccee--eeeecCCC-----CCeEEEEECCCCCEEEE-EeCCCeEEEEeCC
Q psy4391 163 RDGSLIVS-SSYDGLCRIWDTAS--GQCL--KTLIDDDN-----PPVSFVKFSPNGKYILA-ATLDNTLKLWDSY 226 (231)
Q Consensus 163 ~~~~~l~~-~~~dg~i~v~d~~~--~~~~--~~~~~~~~-----~~i~~~~~s~~g~~l~~-~s~d~~v~vwd~~ 226 (231)
|||+++++ ...++.+.+|++.. ++.. ..+..... .....++|+|||++|++ ...++.|.+||..
T Consensus 196 pdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~ 270 (347)
T 3hfq_A 196 PDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVT 270 (347)
T ss_dssp TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEEC
T ss_pred CCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEEC
Confidence 99996665 55678999998764 4421 12211111 34678999999998855 4568999999964
No 147
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.88 E-value=1.6e-19 Score=139.13 Aligned_cols=200 Identities=13% Similarity=0.196 Sum_probs=138.2
Q ss_pred ccccceEEEEECCCCCEEEEEe-CCCcEEEeecC-CCcE--EEEEecc---------cccEEEEEECCCCCEEEEecCCC
Q psy4391 25 GHTKAVSSVKFSPNGEWLASSS-ADKLIKIWGAY-DGKF--EKTISGH---------KLGISDVAWSSDSRLLVSGSDDK 91 (231)
Q Consensus 25 ~h~~~i~~~~~~~~~~~l~~~~-~dg~i~i~~~~-~~~~--~~~~~~~---------~~~v~~~~~~~~~~~l~~~~~~g 91 (231)
.+...+..++|+|+|++|++++ .++.+.+|++. ++.. ...+... ...+..++|+|+|+.+++...++
T Consensus 83 ~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~ 162 (347)
T 3hfq_A 83 APGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSD 162 (347)
T ss_dssp EESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTT
T ss_pred cCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCC
Confidence 4566788999999999888877 67899999985 3332 2222211 12377899999999666666788
Q ss_pred cEEEEeCC-Cceeee--eecC-CCcceEEEEECCCCCEEEE-eecCCcEEEEECCC--Cce--eeeccCCC------CCe
Q psy4391 92 TLKIWELS-SGKCLK--TLKG-HSNYVFCCNFNPQSNLIVS-GSFDESVRIWDVRT--GKC--LKTLPAHS------DPV 156 (231)
Q Consensus 92 ~i~~~d~~-~~~~~~--~~~~-~~~~v~~~~~~~~~~~l~~-~~~d~~i~v~d~~~--~~~--~~~~~~~~------~~v 156 (231)
.|++|++. +++... .+.. ....+..++|+|+|+++++ ...++.+.+|++.. ++. +..+.... ..+
T Consensus 163 ~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 242 (347)
T 3hfq_A 163 KVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGA 242 (347)
T ss_dssp EEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEE
T ss_pred EEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcc
Confidence 99999998 444321 1222 2235678999999996665 45678999999874 432 12222211 347
Q ss_pred EEEEEcCCCCeEE-EEecCCeEEEEeCCCC---ceeeeeecCCCCCeEEEEECCCCCEEEEEeCC-CeEEEEeC
Q psy4391 157 SAVHFNRDGSLIV-SSSYDGLCRIWDTASG---QCLKTLIDDDNPPVSFVKFSPNGKYILAATLD-NTLKLWDS 225 (231)
Q Consensus 157 ~~~~~~~~~~~l~-~~~~dg~i~v~d~~~~---~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d-~~v~vwd~ 225 (231)
..++|+|||++|+ +...++.|.+|++... +.+..+.. ....+..++|+|||++|++++.+ +.|.+|+.
T Consensus 243 ~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~-~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~ 315 (347)
T 3hfq_A 243 AAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQIST-EGDFPRDFDLDPTEAFVVVVNQNTDNATLYAR 315 (347)
T ss_dssp EEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEEC-SSSCCCEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred eeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEec-CCCCcCeEEECCCCCEEEEEEcCCCcEEEEEE
Confidence 8899999999875 4556899999998732 22333322 23345679999999999888765 89999953
No 148
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.88 E-value=5.9e-21 Score=160.19 Aligned_cols=194 Identities=12% Similarity=0.133 Sum_probs=146.9
Q ss_pred cceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEecCCCcEEEEeCCC-----ce
Q psy4391 28 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSS-----GK 102 (231)
Q Consensus 28 ~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~~-----~~ 102 (231)
..|.+++|+|+ +.++.+ .++.+++||..+++... +..+...+..++|+|||+.|+++ .++.|++||+.+ ++
T Consensus 82 ~~v~~~~~spd-~~~~~~-~~~~i~~~d~~~~~~~~-l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~ 157 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLF-TQGGLVGFDMLARKVTY-LFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSR 157 (706)
T ss_dssp CCCEEEEETTT-TEEEEE-ETTEEEEEETTTTEEEE-EECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCC
T ss_pred cCceeEEECCC-CeEEEE-ECCEEEEEECCCCceEE-ccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCC
Confidence 56999999999 665554 36999999998775543 44445567788999999999885 679999999988 76
Q ss_pred eeeeecCCCcc--------------eEEEEECCCCCEEEEee---------------------------------cCCcE
Q psy4391 103 CLKTLKGHSNY--------------VFCCNFNPQSNLIVSGS---------------------------------FDESV 135 (231)
Q Consensus 103 ~~~~~~~~~~~--------------v~~~~~~~~~~~l~~~~---------------------------------~d~~i 135 (231)
.......+... +..+.|+|||+.|++++ .+..|
T Consensus 158 ~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l 237 (706)
T 2z3z_A 158 AIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTV 237 (706)
T ss_dssp CEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEE
T ss_pred cEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEE
Confidence 65544433332 36789999999999987 34679
Q ss_pred EEEECCCCceeeecc--CCCCCeEEEEEcCCCCeEEEEecCC-----eEEEEeCCCCceeeeeec-CCCC---CeEEEEE
Q psy4391 136 RIWDVRTGKCLKTLP--AHSDPVSAVHFNRDGSLIVSSSYDG-----LCRIWDTASGQCLKTLID-DDNP---PVSFVKF 204 (231)
Q Consensus 136 ~v~d~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~v~d~~~~~~~~~~~~-~~~~---~i~~~~~ 204 (231)
++||+.+++...... .+...+..++|+|||+.|++++.++ .|.+||+.+++....+.. .... .+..++|
T Consensus 238 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~ 317 (706)
T 2z3z_A 238 GIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTF 317 (706)
T ss_dssp EEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEE
T ss_pred EEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCcee
Confidence 999999887544332 3556789999999999999887775 899999998843433332 1211 2345789
Q ss_pred CC--CCCEEEEEeCCCeEEEEeC
Q psy4391 205 SP--NGKYILAATLDNTLKLWDS 225 (231)
Q Consensus 205 s~--~g~~l~~~s~d~~v~vwd~ 225 (231)
+| ||+++++++.|+.+++|+.
T Consensus 318 sp~~dg~~l~~~~~~g~~~l~~~ 340 (706)
T 2z3z_A 318 LPGSNNQFIWQSRRDGWNHLYLY 340 (706)
T ss_dssp CTTCSSEEEEEECTTSSCEEEEE
T ss_pred ecCCCCEEEEEEccCCccEEEEE
Confidence 99 9999999999999999974
No 149
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.88 E-value=6.7e-20 Score=140.23 Aligned_cols=192 Identities=14% Similarity=0.189 Sum_probs=141.5
Q ss_pred EEECCCCCE-EEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEecC-CCcEEEEeCCCcee-eeeecC
Q psy4391 33 VKFSPNGEW-LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSD-DKTLKIWELSSGKC-LKTLKG 109 (231)
Q Consensus 33 ~~~~~~~~~-l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~g~i~~~d~~~~~~-~~~~~~ 109 (231)
..|.+++++ ++++..++.|.+||..+++....+..+...+ .++|+|+++++++++. ++.|.+||+.+++. ...+..
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~ 81 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQE 81 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEE
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEeccc
Confidence 346666665 5677788999999999988877776555556 9999999997766555 88999999998876 666655
Q ss_pred CCcceEEEEECCCCCEEEEeecCC---cEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeEEEE-ecCCe-EEEEeCCC
Q psy4391 110 HSNYVFCCNFNPQSNLIVSGSFDE---SVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSS-SYDGL-CRIWDTAS 184 (231)
Q Consensus 110 ~~~~v~~~~~~~~~~~l~~~~~d~---~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~-i~v~d~~~ 184 (231)
+.....++.|+|++++++++..++ .|.+||+.+++.+..+..+ .....++|+|+|++++++ ..++. +.+|++..
T Consensus 82 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~ 160 (331)
T 3u4y_A 82 GQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIP-YDAVGIAISPNGNGLILIDRSSANTVRRFKIDA 160 (331)
T ss_dssp CSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECC-TTEEEEEECTTSSCEEEEEETTTTEEEEEEECT
T ss_pred CCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECC-CCccceEECCCCCEEEEEecCCCceEEEEEECC
Confidence 555444489999999999665553 8999999999887776553 456899999999866655 44577 99999875
Q ss_pred Cceee----eeecCCCCCeEEEEECCCCCEEEEEe-CCCeEEEEeCCC
Q psy4391 185 GQCLK----TLIDDDNPPVSFVKFSPNGKYILAAT-LDNTLKLWDSYP 227 (231)
Q Consensus 185 ~~~~~----~~~~~~~~~i~~~~~s~~g~~l~~~s-~d~~v~vwd~~~ 227 (231)
...+. ... ........++|+|+|+++++++ .++.|.+||...
T Consensus 161 ~g~~~~~~~~~~-~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~ 207 (331)
T 3u4y_A 161 DGVLFDTGQEFI-SGGTRPFNITFTPDGNFAFVANLIGNSIGILETQN 207 (331)
T ss_dssp TCCEEEEEEEEE-CSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred CCcEeecCCccc-cCCCCccceEECCCCCEEEEEeCCCCeEEEEECCC
Confidence 43321 111 2234467899999999776655 588999999743
No 150
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.87 E-value=4.1e-20 Score=142.12 Aligned_cols=190 Identities=14% Similarity=0.091 Sum_probs=143.6
Q ss_pred ceEEEEECCCCCEEE-EEeCCCcEEEeecCCCcEEEEEecc------cccEEEEEECCCCCEEEEecCC-----------
Q psy4391 29 AVSSVKFSPNGEWLA-SSSADKLIKIWGAYDGKFEKTISGH------KLGISDVAWSSDSRLLVSGSDD----------- 90 (231)
Q Consensus 29 ~i~~~~~~~~~~~l~-~~~~dg~i~i~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~~----------- 90 (231)
.+..++|+|+|+.++ ++..++.|.+||..+++....+... ...+..++|+|+|+++++++.+
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~ 123 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVK 123 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEEC
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccC
Confidence 577899999999665 4556889999999888777666532 2236788999999999888865
Q ss_pred -CcEEEEeCCCceee---eeecCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeeccCCC-------------
Q psy4391 91 -KTLKIWELSSGKCL---KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHS------------- 153 (231)
Q Consensus 91 -g~i~~~d~~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~------------- 153 (231)
+.|.+||+.+++.. ..... ...+.+++|+|+++ +++++ +.|.+||+.+++....+..+.
T Consensus 124 ~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~-l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (349)
T 1jmx_B 124 PPRLEVFSTADGLEAKPVRTFPM-PRQVYLMRAADDGS-LYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLY 199 (349)
T ss_dssp CCEEEEEEGGGGGGBCCSEEEEC-CSSCCCEEECTTSC-EEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCC
T ss_pred CCeEEEEECCCccccceeeeccC-CCcccceeECCCCc-EEEcc--CcEEEEeCCCCceeccccccccCCccccCcccee
Confidence 89999999875432 23332 23467788999999 55544 349999999887665543221
Q ss_pred -------------------------------------------------------CCeEEEEEcC-CCCeEEEEecCCeE
Q psy4391 154 -------------------------------------------------------DPVSAVHFNR-DGSLIVSSSYDGLC 177 (231)
Q Consensus 154 -------------------------------------------------------~~v~~~~~~~-~~~~l~~~~~dg~i 177 (231)
..+..++++| ++++++++ ++.|
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v 277 (349)
T 1jmx_B 200 FWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRL 277 (349)
T ss_dssp CCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEE
T ss_pred eecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeE
Confidence 1345677889 99998888 8899
Q ss_pred EEEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCC
Q psy4391 178 RIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSY 226 (231)
Q Consensus 178 ~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~~ 226 (231)
.+||+.+++.+..+.... .+..++|+|+|++|++++.++.|.+||..
T Consensus 278 ~~~d~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~~~~~~~~v~v~d~~ 324 (349)
T 1jmx_B 278 AKYDLKQRKLIKAANLDH--TYYCVAFDKKGDKLYLGGTFNDLAVFNPD 324 (349)
T ss_dssp EEEETTTTEEEEEEECSS--CCCEEEECSSSSCEEEESBSSEEEEEETT
T ss_pred EEEECccCeEEEEEcCCC--CccceEECCCCCEEEEecCCCeEEEEecc
Confidence 999999988776665332 34679999999999998889999999974
No 151
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.86 E-value=1.1e-19 Score=158.68 Aligned_cols=197 Identities=13% Similarity=0.089 Sum_probs=154.8
Q ss_pred ccccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEecCCC----------cEE
Q psy4391 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDK----------TLK 94 (231)
Q Consensus 25 ~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g----------~i~ 94 (231)
+|...+..++|+|||++|++++.++.+++||..+++.......+...+..++|+|||++|++++.++ .|+
T Consensus 376 ~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~ 455 (1045)
T 1k32_A 376 ENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIH 455 (1045)
T ss_dssp CCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEE
T ss_pred CCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEE
Confidence 6778899999999999999999999999999998887777767777889999999999998877644 899
Q ss_pred EEeCCCceeeeeecCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCce-----------------------------
Q psy4391 95 IWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC----------------------------- 145 (231)
Q Consensus 95 ~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~----------------------------- 145 (231)
+||+.+++ ...+..+...+..+.|+|+|+.|++++.++...+|+......
T Consensus 456 l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 (1045)
T 1k32_A 456 VYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMT 534 (1045)
T ss_dssp EEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGGS
T ss_pred EEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhccccccccCceeEEEEeCCCCCCccccCcCccc
Confidence 99999887 556666777788899999999999998877666665432111
Q ss_pred --------------eeeccCCCCCeEEEEEcCCCCeEEE-------------EecCCeEEEEeCCCCceeeeeecCCCCC
Q psy4391 146 --------------LKTLPAHSDPVSAVHFNRDGSLIVS-------------SSYDGLCRIWDTASGQCLKTLIDDDNPP 198 (231)
Q Consensus 146 --------------~~~~~~~~~~v~~~~~~~~~~~l~~-------------~~~dg~i~v~d~~~~~~~~~~~~~~~~~ 198 (231)
+..+..+.+.+..++++|+++++++ ......+.+||+.+++.. .+. ..
T Consensus 535 ~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~----~~ 609 (1045)
T 1k32_A 535 SEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVT-EVK----NN 609 (1045)
T ss_dssp CCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCEE-EEE----EE
T ss_pred cccccccccCHhHceEEcCCCCCChhheEEcCCCeEEEEecccCcccccccccCCCceEEEEECCCCcEE-Eee----cC
Confidence 1122334567889999999987775 122457889999888743 232 34
Q ss_pred eEEEEECCCCCEEEEEeCCCeEEEEeCCCC
Q psy4391 199 VSFVKFSPNGKYILAATLDNTLKLWDSYPC 228 (231)
Q Consensus 199 i~~~~~s~~g~~l~~~s~d~~v~vwd~~~~ 228 (231)
+..++|||||++|++++.+ .|++||..+.
T Consensus 610 v~~~~~S~DG~~l~~~~~~-~i~~~d~~~~ 638 (1045)
T 1k32_A 610 LTDLRLSADRKTVMVRKDD-GKIYTFPLEK 638 (1045)
T ss_dssp EEEEEECTTSCEEEEEETT-SCEEEEESSC
T ss_pred cceEEECCCCCEEEEEcCC-cEEEEeCccC
Confidence 6788999999999998865 8999997543
No 152
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.86 E-value=1.7e-20 Score=157.38 Aligned_cols=199 Identities=18% Similarity=0.297 Sum_probs=145.3
Q ss_pred ccccceEEEEECCCCCEEEEEeCCCcEEEeecCC-----CcEEEEEeccccc--------------EEEEEECCCCCEEE
Q psy4391 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-----GKFEKTISGHKLG--------------ISDVAWSSDSRLLV 85 (231)
Q Consensus 25 ~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~-----~~~~~~~~~~~~~--------------v~~~~~~~~~~~l~ 85 (231)
.+...+..++|+|||++|+.+ .++.|++|+..+ ++.......+... +..+.|+|||++|+
T Consensus 118 ~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la 196 (706)
T 2z3z_A 118 DTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLA 196 (706)
T ss_dssp CCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEE
T ss_pred CCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEE
Confidence 455678889999999999885 689999999987 6655443333332 47899999999999
Q ss_pred Eec---------------------------------CCCcEEEEeCCCceeeeeec--CCCcceEEEEECCCCCEEEEee
Q psy4391 86 SGS---------------------------------DDKTLKIWELSSGKCLKTLK--GHSNYVFCCNFNPQSNLIVSGS 130 (231)
Q Consensus 86 ~~~---------------------------------~~g~i~~~d~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~ 130 (231)
+++ .+..|++||+++++...... .+...+..+.|+|+|+.|++++
T Consensus 197 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~ 276 (706)
T 2z3z_A 197 FYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAE 276 (706)
T ss_dssp EEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEE
T ss_pred EEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEE
Confidence 887 34679999999887554432 3456788999999999999887
Q ss_pred cCC-----cEEEEECCCCceeeecc--CCC---CCeEEEEEcC--CCCeEEEEecCCeEEEEeCC-CCceeeeeecCCCC
Q psy4391 131 FDE-----SVRIWDVRTGKCLKTLP--AHS---DPVSAVHFNR--DGSLIVSSSYDGLCRIWDTA-SGQCLKTLIDDDNP 197 (231)
Q Consensus 131 ~d~-----~i~v~d~~~~~~~~~~~--~~~---~~v~~~~~~~--~~~~l~~~~~dg~i~v~d~~-~~~~~~~~~~~~~~ 197 (231)
.++ .|++||+.+++....+. .+. ..+..++|+| ||++++++..++.+++|++. +++.+..+.. +..
T Consensus 277 ~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~-~~~ 355 (706)
T 2z3z_A 277 VNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTK-GEW 355 (706)
T ss_dssp ECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCC-SSS
T ss_pred eCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCC-CCe
Confidence 765 89999999883333322 111 1245689999 99999999999988888765 4554555433 344
Q ss_pred CeEE-EEECCCCCEEEEEeCC-C----eEEEEeC
Q psy4391 198 PVSF-VKFSPNGKYILAATLD-N----TLKLWDS 225 (231)
Q Consensus 198 ~i~~-~~~s~~g~~l~~~s~d-~----~v~vwd~ 225 (231)
.+.. ++|+|+|+.|++++.+ + .|..||.
T Consensus 356 ~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~ 389 (706)
T 2z3z_A 356 EVTNFAGFDPKGTRLYFESTEASPLERHFYCIDI 389 (706)
T ss_dssp CEEEEEEECTTSSEEEEEESSSCTTCBEEEEEET
T ss_pred EEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEc
Confidence 5655 7999999988776654 3 5556664
No 153
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.85 E-value=2.8e-18 Score=132.98 Aligned_cols=196 Identities=14% Similarity=0.195 Sum_probs=133.8
Q ss_pred cccceEEEEECCCCCEEEEEe-CCCcEEEeecCCCcEEEE----E--ec--------ccccEEEEEECCCCCEEEEec-C
Q psy4391 26 HTKAVSSVKFSPNGEWLASSS-ADKLIKIWGAYDGKFEKT----I--SG--------HKLGISDVAWSSDSRLLVSGS-D 89 (231)
Q Consensus 26 h~~~i~~~~~~~~~~~l~~~~-~dg~i~i~~~~~~~~~~~----~--~~--------~~~~v~~~~~~~~~~~l~~~~-~ 89 (231)
+......+++ ++++|++++ .++.+.+|++........ . .+ +...+..++|+|+|+++++++ .
T Consensus 98 ~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 175 (361)
T 3scy_A 98 MGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLG 175 (361)
T ss_dssp SSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETT
T ss_pred CCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCC
Confidence 3445667777 788777665 578999999864322111 1 11 112357899999999775554 5
Q ss_pred CCcEEEEeCCCcee------e-------eeecCCCcceEEEEECCCCCEEEEee-cCCcEEEEECCCCce--eeec---c
Q psy4391 90 DKTLKIWELSSGKC------L-------KTLKGHSNYVFCCNFNPQSNLIVSGS-FDESVRIWDVRTGKC--LKTL---P 150 (231)
Q Consensus 90 ~g~i~~~d~~~~~~------~-------~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~v~d~~~~~~--~~~~---~ 150 (231)
++.+.+|++..... + .........+..++|+|+|+++++++ .++.|.+||+.++.. +..+ .
T Consensus 176 ~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~ 255 (361)
T 3scy_A 176 TDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADT 255 (361)
T ss_dssp TTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCS
T ss_pred CCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCC
Confidence 78999998875331 1 11122344567899999999887777 689999999987653 2222 2
Q ss_pred CCCCCeEEEEEcCCCCeEEEEecC--CeEEEEeCC--CCc--eeeeeecCCCCCeEEEEECCCCCEEEEEe-CCCeEEEE
Q psy4391 151 AHSDPVSAVHFNRDGSLIVSSSYD--GLCRIWDTA--SGQ--CLKTLIDDDNPPVSFVKFSPNGKYILAAT-LDNTLKLW 223 (231)
Q Consensus 151 ~~~~~v~~~~~~~~~~~l~~~~~d--g~i~v~d~~--~~~--~~~~~~~~~~~~i~~~~~s~~g~~l~~~s-~d~~v~vw 223 (231)
.+......++|+|||++|+++..+ +.|.+|++. +++ .+..+.. ...+..++|+|+|++|++++ .++.|.+|
T Consensus 256 ~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~--g~~~~~~~~spdg~~l~~~~~~~~~v~v~ 333 (361)
T 3scy_A 256 VNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT--GIHPRNFIITPNGKYLLVACRDTNVIQIF 333 (361)
T ss_dssp SCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC--SSCCCEEEECTTSCEEEEEETTTTEEEEE
T ss_pred CCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC--CCCCceEEECCCCCEEEEEECCCCCEEEE
Confidence 333457899999999998776654 899999985 444 2223322 33456799999999998887 57899996
Q ss_pred eC
Q psy4391 224 DS 225 (231)
Q Consensus 224 d~ 225 (231)
+.
T Consensus 334 ~~ 335 (361)
T 3scy_A 334 ER 335 (361)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 154
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.85 E-value=4e-18 Score=132.11 Aligned_cols=199 Identities=14% Similarity=0.222 Sum_probs=136.3
Q ss_pred cccceEEEEECCCCCEEEEEeCC----CcEEEeecCC--CcEE--EEEecccccEEEEEECCCCCEEEEec-CCCcEEEE
Q psy4391 26 HTKAVSSVKFSPNGEWLASSSAD----KLIKIWGAYD--GKFE--KTISGHKLGISDVAWSSDSRLLVSGS-DDKTLKIW 96 (231)
Q Consensus 26 h~~~i~~~~~~~~~~~l~~~~~d----g~i~i~~~~~--~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~-~~g~i~~~ 96 (231)
+......++|+|+|++|++++.+ +.+.+|++.. +... .....+......+++ +++++++++ .++.+.+|
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~ 125 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVF 125 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEE
Confidence 45667789999999999888875 7999998754 4332 223333445667777 778776665 57899999
Q ss_pred eCCCceeeeee------cC--------CCcceEEEEECCCCCEEEEee-cCCcEEEEECCCCce------e-------ee
Q psy4391 97 ELSSGKCLKTL------KG--------HSNYVFCCNFNPQSNLIVSGS-FDESVRIWDVRTGKC------L-------KT 148 (231)
Q Consensus 97 d~~~~~~~~~~------~~--------~~~~v~~~~~~~~~~~l~~~~-~d~~i~v~d~~~~~~------~-------~~ 148 (231)
++.....+..+ .+ +...+.+++|+|+|+++++++ .++.+.+|++..... + ..
T Consensus 126 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~ 205 (361)
T 3scy_A 126 PIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAF 205 (361)
T ss_dssp EBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEE
T ss_pred EeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccce
Confidence 99753322111 11 122346789999999776655 578999998875431 1 11
Q ss_pred ccCCCCCeEEEEEcCCCCeEEEEe-cCCeEEEEeCCCCcee--eeeec--CCCCCeEEEEECCCCCEEEEEeCC--CeEE
Q psy4391 149 LPAHSDPVSAVHFNRDGSLIVSSS-YDGLCRIWDTASGQCL--KTLID--DDNPPVSFVKFSPNGKYILAATLD--NTLK 221 (231)
Q Consensus 149 ~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~v~d~~~~~~~--~~~~~--~~~~~i~~~~~s~~g~~l~~~s~d--~~v~ 221 (231)
.......+..++|+|+|+++++++ .++.|.+||+.+++.. ..+.. ........++|+|||++|+++..+ +.|.
T Consensus 206 ~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~ 285 (361)
T 3scy_A 206 KVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVA 285 (361)
T ss_dssp ECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEE
T ss_pred ecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEE
Confidence 223345678999999999887776 6899999999876542 22211 112335789999999999777655 8999
Q ss_pred EEeCC
Q psy4391 222 LWDSY 226 (231)
Q Consensus 222 vwd~~ 226 (231)
+|+..
T Consensus 286 v~~~~ 290 (361)
T 3scy_A 286 IFKVD 290 (361)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 99864
No 155
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.85 E-value=3.1e-19 Score=137.20 Aligned_cols=156 Identities=13% Similarity=0.128 Sum_probs=118.7
Q ss_pred EEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEeccc-ccEEEEEECCCCCEEE-EecCCCcEEEEeCCCceeeeeecC
Q psy4391 32 SVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK-LGISDVAWSSDSRLLV-SGSDDKTLKIWELSSGKCLKTLKG 109 (231)
Q Consensus 32 ~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~-~~~~~g~i~~~d~~~~~~~~~~~~ 109 (231)
.++++++++++++++.++.|.+||..+++....+..+. ..+..++|+|+++.++ +...++.|.+||+.+++....+..
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~ 83 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANL 83 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEES
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEc
Confidence 45678888899999999999999999888777776433 2467899999998664 556789999999999887766653
Q ss_pred CC------cceEEEEECCCCCEEEEeecC------------CcEEEEECCCCceee---eccCCCCCeEEEEEcCCCCeE
Q psy4391 110 HS------NYVFCCNFNPQSNLIVSGSFD------------ESVRIWDVRTGKCLK---TLPAHSDPVSAVHFNRDGSLI 168 (231)
Q Consensus 110 ~~------~~v~~~~~~~~~~~l~~~~~d------------~~i~v~d~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l 168 (231)
.. ..+..+.|+|+|+++++++.+ +.|.+||+.+++... ... +...+.+++|+|+++ +
T Consensus 84 ~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~-l 161 (349)
T 1jmx_B 84 SSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS-L 161 (349)
T ss_dssp CCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC-E
T ss_pred ccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCCCc-E
Confidence 22 225678999999999998865 899999998754322 222 233578889999999 5
Q ss_pred EEEecCCeEEEEeCCCCceeeee
Q psy4391 169 VSSSYDGLCRIWDTASGQCLKTL 191 (231)
Q Consensus 169 ~~~~~dg~i~v~d~~~~~~~~~~ 191 (231)
++++ +.|.+||+.+++....+
T Consensus 162 ~~~~--~~i~~~d~~~~~~~~~~ 182 (349)
T 1jmx_B 162 YVAG--PDIYKMDVKTGKYTVAL 182 (349)
T ss_dssp EEES--SSEEEECTTTCCEEEEE
T ss_pred EEcc--CcEEEEeCCCCceeccc
Confidence 5554 34999999988766544
No 156
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.85 E-value=5.7e-20 Score=154.58 Aligned_cols=188 Identities=15% Similarity=0.226 Sum_probs=139.4
Q ss_pred EEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecccc---cEEEEEECCCCCEEEEecC---------CCcEEEEeCC
Q psy4391 32 SVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKL---GISDVAWSSDSRLLVSGSD---------DKTLKIWELS 99 (231)
Q Consensus 32 ~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~---------~g~i~~~d~~ 99 (231)
.+.|+|+|+++++ +.|+.|++|+..+++....+..+.. .+..++|+|||++|++++. ++.|++||++
T Consensus 20 ~~~~s~dg~~~~~-~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~ 98 (719)
T 1z68_A 20 FPNWISGQEYLHQ-SADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLS 98 (719)
T ss_dssp CCEESSSSEEEEE-CTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred ccEECCCCeEEEE-cCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECC
Confidence 6789999965555 4699999999998887766665543 3889999999999998876 6899999999
Q ss_pred Cceee--eeecCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeecc-CCCCCe-----------------EEE
Q psy4391 100 SGKCL--KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLP-AHSDPV-----------------SAV 159 (231)
Q Consensus 100 ~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~~v-----------------~~~ 159 (231)
+++.. ..+. ..+..+.|+|||+.|+.+. ++.|++||+.+++...... .+...+ .++
T Consensus 99 ~g~~~~~~~l~---~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~ 174 (719)
T 1z68_A 99 NGEFVRGNELP---RPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYAL 174 (719)
T ss_dssp TTEECCSSCCC---SSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCE
T ss_pred CCccccceecC---cccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccE
Confidence 88763 2222 3467789999999999885 7899999998877543321 222222 479
Q ss_pred EEcCCCCeEEEEecCC----------------------------------eEEEEeCCCCcee--eeee-----cCCCCC
Q psy4391 160 HFNRDGSLIVSSSYDG----------------------------------LCRIWDTASGQCL--KTLI-----DDDNPP 198 (231)
Q Consensus 160 ~~~~~~~~l~~~~~dg----------------------------------~i~v~d~~~~~~~--~~~~-----~~~~~~ 198 (231)
+|+|||++|+.++.|. .+.+||+.+++.. ..+. ..+...
T Consensus 175 ~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 254 (719)
T 1z68_A 175 WWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYY 254 (719)
T ss_dssp EECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEE
T ss_pred EECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcce
Confidence 9999999999887652 7889999887642 1111 124445
Q ss_pred eEEEEECCCCCEEEEEeCC----CeEEEEe
Q psy4391 199 VSFVKFSPNGKYILAATLD----NTLKLWD 224 (231)
Q Consensus 199 i~~~~~s~~g~~l~~~s~d----~~v~vwd 224 (231)
+..++|+||++++++.... ..|.+||
T Consensus 255 ~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d 284 (719)
T 1z68_A 255 FSWLTWVTDERVCLQWLKRVQNVSVLSICD 284 (719)
T ss_dssp EEEEEESSSSEEEEEEEESSTTEEEEEEEE
T ss_pred EEEeEEeCCCeEEEEEeccccCeEEEEEEc
Confidence 7889999998877764432 2488888
No 157
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.84 E-value=7.5e-19 Score=134.34 Aligned_cols=148 Identities=14% Similarity=0.196 Sum_probs=116.4
Q ss_pred CEEEEEeCCCcEEEeecCCCcEEEEEecccc--cEEEEEECCCCCEE-EEecCCCcEEEEeCCCceeeeeecCCC-----
Q psy4391 40 EWLASSSADKLIKIWGAYDGKFEKTISGHKL--GISDVAWSSDSRLL-VSGSDDKTLKIWELSSGKCLKTLKGHS----- 111 (231)
Q Consensus 40 ~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l-~~~~~~g~i~~~d~~~~~~~~~~~~~~----- 111 (231)
+++++++.++.|.+||..+++....+..... .+..++|+|+++.+ +++..++.|.+||+.+++....+....
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence 4788899999999999998887777653321 47789999999876 455667899999999988776665321
Q ss_pred cceEEEEECCCCCEEEEee------------cCCcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeEEEEecCCeEEE
Q psy4391 112 NYVFCCNFNPQSNLIVSGS------------FDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 179 (231)
Q Consensus 112 ~~v~~~~~~~~~~~l~~~~------------~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v 179 (231)
..+..+.|+|+++.++++. .++.|.+||+.+++.+..+.. ...+..++|+|++++++++ ++.+.+
T Consensus 82 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~ 158 (337)
T 1pby_B 82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHV 158 (337)
T ss_dssp ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEE
T ss_pred ccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEE
Confidence 1455789999999988886 579999999998887766654 3456788999999988887 688999
Q ss_pred EeCCCCceeee
Q psy4391 180 WDTASGQCLKT 190 (231)
Q Consensus 180 ~d~~~~~~~~~ 190 (231)
||+.+++....
T Consensus 159 ~d~~~~~~~~~ 169 (337)
T 1pby_B 159 MDPEAGTLVED 169 (337)
T ss_dssp EETTTTEEEEE
T ss_pred EECCCCcEeee
Confidence 99988776543
No 158
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.84 E-value=1.4e-19 Score=148.88 Aligned_cols=192 Identities=12% Similarity=0.098 Sum_probs=135.8
Q ss_pred ccceEEEEECCCCCEEEEEeC-CCcEEEeecCCCcEEEEEeccc-ccEEEEEECCCCCEEEEecC---CCcEEEEeCCC-
Q psy4391 27 TKAVSSVKFSPNGEWLASSSA-DKLIKIWGAYDGKFEKTISGHK-LGISDVAWSSDSRLLVSGSD---DKTLKIWELSS- 100 (231)
Q Consensus 27 ~~~i~~~~~~~~~~~l~~~~~-dg~i~i~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~---~g~i~~~d~~~- 100 (231)
...|.+++|+|||++||.++. ||.+++|++.++. ...+..+. ..+..++|+|| +.+++++. +....+|.+..
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~-~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~ 98 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGE-TVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTS 98 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTE-EEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETT
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCC-cEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEecc
Confidence 457999999999999998776 9999999985554 44555544 57889999999 76766654 44455554432
Q ss_pred --ceeeeeecCCCcceEEEEECCCCCE-EEEeecCCcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeEEEEecC---
Q psy4391 101 --GKCLKTLKGHSNYVFCCNFNPQSNL-IVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD--- 174 (231)
Q Consensus 101 --~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--- 174 (231)
+... .+.... .....+|+|+++. +++.+.++.+.+||+.+++...... +.. .+++|+|||+++++++.+
T Consensus 99 ~~g~~~-~l~~~~-~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~-~~~--~~~~~spDG~~la~~~~~~~~ 173 (582)
T 3o4h_A 99 RPGEEQ-RLEAVK-PMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELAR-LPG--FGFVSDIRGDLIAGLGFFGGG 173 (582)
T ss_dssp STTCCE-ECTTSC-SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEE-ESS--CEEEEEEETTEEEEEEEEETT
T ss_pred CCCccc-cccCCC-CceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeec-CCC--ceEEECCCCCEEEEEEEcCCC
Confidence 2222 332222 2335577887753 3344445556699999887544433 222 788999999999988777
Q ss_pred -CeEEEEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEeCCC--eEEEEeCCC
Q psy4391 175 -GLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN--TLKLWDSYP 227 (231)
Q Consensus 175 -g~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~--~v~vwd~~~ 227 (231)
+.|++||+.+++.. .+ ..+...+..++|||||++|+++..++ .|.+||...
T Consensus 174 ~~~i~~~d~~~g~~~-~l-~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~ 227 (582)
T 3o4h_A 174 RVSLFTSNLSSGGLR-VF-DSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRD 227 (582)
T ss_dssp EEEEEEEETTTCCCE-EE-CCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTT
T ss_pred CeEEEEEcCCCCCce-Ee-ecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCC
Confidence 78999999888754 33 34445678899999999999888888 899999643
No 159
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.84 E-value=8.7e-19 Score=136.21 Aligned_cols=198 Identities=11% Similarity=0.078 Sum_probs=138.5
Q ss_pred cceEEEEECCCCCEEEEEeCCCcEEEeecC-CCcEEEEEecc-cccEEEEEECCCCCE--EEEec-------------CC
Q psy4391 28 KAVSSVKFSPNGEWLASSSADKLIKIWGAY-DGKFEKTISGH-KLGISDVAWSSDSRL--LVSGS-------------DD 90 (231)
Q Consensus 28 ~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~-~~~~~~~~~~~-~~~v~~~~~~~~~~~--l~~~~-------------~~ 90 (231)
..+..++|+|+|++|++++.+ .+.+|++. +++........ ...+..++|+|+|++ ++++. .+
T Consensus 40 ~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~ 118 (365)
T 1jof_A 40 EPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFA 118 (365)
T ss_dssp CCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSC
T ss_pred CCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCC
Confidence 467889999999999888877 99999986 66554332211 122445789999994 44553 68
Q ss_pred CcEEEEeCC-Cceeeeeec----CCCcceEEEEECCCCCEEEEeec-CCcEEEEECC-CCcee--eecc--CCCCCeEEE
Q psy4391 91 KTLKIWELS-SGKCLKTLK----GHSNYVFCCNFNPQSNLIVSGSF-DESVRIWDVR-TGKCL--KTLP--AHSDPVSAV 159 (231)
Q Consensus 91 g~i~~~d~~-~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~-d~~i~v~d~~-~~~~~--~~~~--~~~~~v~~~ 159 (231)
+.+.+|++. +++....+. .+...+..+.|+|+|++++++.. ++.|++||+. +++.. ..+. .+...+..+
T Consensus 119 g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~ 198 (365)
T 1jof_A 119 GYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWV 198 (365)
T ss_dssp CEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEE
T ss_pred ceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEe
Confidence 899999997 355433332 23456888999999998887764 6789999998 66542 2232 235568999
Q ss_pred EEcCCCCeEEEEec-CCeEEEEeCC--CCceee---eeecC-C---C-C-------CeEEEE-ECCCCCEEEEEeCC-C-
Q psy4391 160 HFNRDGSLIVSSSY-DGLCRIWDTA--SGQCLK---TLIDD-D---N-P-------PVSFVK-FSPNGKYILAATLD-N- 218 (231)
Q Consensus 160 ~~~~~~~~l~~~~~-dg~i~v~d~~--~~~~~~---~~~~~-~---~-~-------~i~~~~-~s~~g~~l~~~s~d-~- 218 (231)
+|+|+|+++++++. ++.+.+|++. +++... .+... . . . .+..++ |+|||++|+++..+ +
T Consensus 199 ~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~ 278 (365)
T 1jof_A 199 AMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKF 278 (365)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESST
T ss_pred EECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCC
Confidence 99999999887765 6899998764 454321 12111 1 1 1 367899 99999998877643 3
Q ss_pred ----eEEEEeCC
Q psy4391 219 ----TLKLWDSY 226 (231)
Q Consensus 219 ----~v~vwd~~ 226 (231)
.|.+|+..
T Consensus 279 ~~~~~i~v~~~~ 290 (365)
T 1jof_A 279 ELQGYIAGFKLR 290 (365)
T ss_dssp TSCCEEEEEEEC
T ss_pred CCCCeEEEEEEC
Confidence 89999863
No 160
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.84 E-value=9.1e-20 Score=149.94 Aligned_cols=192 Identities=9% Similarity=0.123 Sum_probs=138.9
Q ss_pred ccc-cceEEEEECCCCCEEEEEeC---CCcEEEeecCC---CcEEEEEecccccEEEEEECCCCCE-EEEecCCCcEEEE
Q psy4391 25 GHT-KAVSSVKFSPNGEWLASSSA---DKLIKIWGAYD---GKFEKTISGHKLGISDVAWSSDSRL-LVSGSDDKTLKIW 96 (231)
Q Consensus 25 ~h~-~~i~~~~~~~~~~~l~~~~~---dg~i~i~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~~g~i~~~ 96 (231)
.|. ..+..+.|+|| +.++++.. +...++|.... +... .+... ......+|+|+++. +++...++.+.+|
T Consensus 61 ~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~l~~~-~~~~~~~~s~dg~~~~~~s~~~~~~~l~ 137 (582)
T 3o4h_A 61 REPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEEQ-RLEAV-KPMRILSGVDTGEAVVFTGATEDRVALY 137 (582)
T ss_dssp SSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCCE-ECTTS-CSBEEEEEEECSSCEEEEEECSSCEEEE
T ss_pred cccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCccc-cccCC-CCceeeeeCCCCCeEEEEecCCCCceEE
Confidence 444 57899999999 77777665 44556655432 2222 33322 23445688888864 3344445556699
Q ss_pred eCCCceeeeeecCCCcceEEEEECCCCCEEEEeecC----CcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeEEEEe
Q psy4391 97 ELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD----ESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSS 172 (231)
Q Consensus 97 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 172 (231)
|+++++.......+. .++.|+|||+.+++++.+ +.|++||+.+++. ..+..+.+.+..++|+|||+.|+++.
T Consensus 138 d~~~g~~~~l~~~~~---~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~-~~l~~~~~~~~~~~~SpDG~~l~~~~ 213 (582)
T 3o4h_A 138 ALDGGGLRELARLPG---FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGL-RVFDSGEGSFSSASISPGMKVTAGLE 213 (582)
T ss_dssp EEETTEEEEEEEESS---CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCC-EEECCSSCEEEEEEECTTSCEEEEEE
T ss_pred EccCCcEEEeecCCC---ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCc-eEeecCCCccccceECCCCCEEEEcc
Confidence 999887655544332 578899999999988776 7799999988875 45667778889999999999999888
Q ss_pred cCC--eEEEEeCCCCceeeeeecCCCCCeEEEE--------ECCCCCEEEEEeCCCeEEEEeC
Q psy4391 173 YDG--LCRIWDTASGQCLKTLIDDDNPPVSFVK--------FSPNGKYILAATLDNTLKLWDS 225 (231)
Q Consensus 173 ~dg--~i~v~d~~~~~~~~~~~~~~~~~i~~~~--------~s~~g~~l~~~s~d~~v~vwd~ 225 (231)
.++ .|++||+.+++.. ....+...+..++ |+|||.++++++.|+.+++|+.
T Consensus 214 ~~~~~~i~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 214 TAREARLVTVDPRDGSVE--DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp CSSCEEEEEECTTTCCEE--ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred CCCeeEEEEEcCCCCcEE--EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 888 8999999988765 3333333344445 9999988899999999999985
No 161
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.83 E-value=3.8e-17 Score=122.61 Aligned_cols=201 Identities=16% Similarity=0.278 Sum_probs=148.1
Q ss_pred cccceEEEEE-CCCCCEEEEEeC-CCcEEEeecCCCcEEEEEec-ccccEEEEEECCCCCEEEEecCCCcEEEEeCCCce
Q psy4391 26 HTKAVSSVKF-SPNGEWLASSSA-DKLIKIWGAYDGKFEKTISG-HKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGK 102 (231)
Q Consensus 26 h~~~i~~~~~-~~~~~~l~~~~~-dg~i~i~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~ 102 (231)
|...+..+++ .++++++++... ++.|.+|+ .+++....+.. +...+..++++|+++.+++...++.|.+||.. ++
T Consensus 75 ~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~ 152 (286)
T 1q7f_A 75 QLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GN 152 (286)
T ss_dssp CBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred cccCceEEEEEcCCCeEEEEcCCCCCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CC
Confidence 4456889999 567776666533 78999999 45666655542 33468899999999988887788999999965 44
Q ss_pred eeeeec--CCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeeccCC--CCCeEEEEEcCCCCeEEEEecCC-eE
Q psy4391 103 CLKTLK--GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAH--SDPVSAVHFNRDGSLIVSSSYDG-LC 177 (231)
Q Consensus 103 ~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~dg-~i 177 (231)
....+. .+...+..++++++++++++...++.|++||.. ++.+..+... ...+..++++++|+++++...++ .|
T Consensus 153 ~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i 231 (286)
T 1q7f_A 153 VLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNL 231 (286)
T ss_dssp EEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEE
T ss_pred EEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEE
Confidence 444443 233567899999999988887888999999975 4555555433 25688999999999888887776 99
Q ss_pred EEEeCCCCceeeeeecCCC-CCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCCCC
Q psy4391 178 RIWDTASGQCLKTLIDDDN-PPVSFVKFSPNGKYILAATLDNTLKLWDSYPCLPK 231 (231)
Q Consensus 178 ~v~d~~~~~~~~~~~~~~~-~~i~~~~~s~~g~~l~~~s~d~~v~vwd~~~~~~~ 231 (231)
.+||.. ++.+..+..... .....++++|+|+++++ +.|++|++|+..+..|+
T Consensus 232 ~~~~~~-g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~~pv 284 (286)
T 1q7f_A 232 TIFTQD-GQLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQLAPV 284 (286)
T ss_dssp EEECTT-SCEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSCCCCT
T ss_pred EEECCC-CCEEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEccccccc
Confidence 999964 555555543322 23568999999986666 67999999998766553
No 162
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.83 E-value=9.4e-19 Score=136.70 Aligned_cols=203 Identities=12% Similarity=0.041 Sum_probs=143.9
Q ss_pred eecccccceEE-----EEECCCCCEEEEEeC-CC--cEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEecCCCcE
Q psy4391 22 TLAGHTKAVSS-----VKFSPNGEWLASSSA-DK--LIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTL 93 (231)
Q Consensus 22 ~~~~h~~~i~~-----~~~~~~~~~l~~~~~-dg--~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i 93 (231)
.+..|...... .+|+|||++|+.++. +| .|.+|+..+++......++...+..+.|+||++.|+.+..++.+
T Consensus 25 ~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l 104 (388)
T 3pe7_A 25 RLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNL 104 (388)
T ss_dssp ECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEE
T ss_pred EecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeE
Confidence 34455555555 789999999888776 66 47788887777665555554444467899999999999999999
Q ss_pred EEEeCCCceeeeeecCCCcceEEE--EECCCCCEEEEe----------------------ecCCcEEEEECCCCceeeec
Q psy4391 94 KIWELSSGKCLKTLKGHSNYVFCC--NFNPQSNLIVSG----------------------SFDESVRIWDVRTGKCLKTL 149 (231)
Q Consensus 94 ~~~d~~~~~~~~~~~~~~~~v~~~--~~~~~~~~l~~~----------------------~~d~~i~v~d~~~~~~~~~~ 149 (231)
++||+.+++.......+...+... .++|++..++.. ..+..|.+||+.+++. ..+
T Consensus 105 ~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~-~~l 183 (388)
T 3pe7_A 105 MRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGES-TVI 183 (388)
T ss_dssp EEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCE-EEE
T ss_pred EEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCce-EEe
Confidence 999999987666555544444333 348999988743 2346799999998864 344
Q ss_pred cCCCCCeEEEEEcC-CCCeEEEEecC------CeEEEEeCCCCceeeeeecCCC-CCeEEEEECCCCCEEEEEeCC-C--
Q psy4391 150 PAHSDPVSAVHFNR-DGSLIVSSSYD------GLCRIWDTASGQCLKTLIDDDN-PPVSFVKFSPNGKYILAATLD-N-- 218 (231)
Q Consensus 150 ~~~~~~v~~~~~~~-~~~~l~~~~~d------g~i~v~d~~~~~~~~~~~~~~~-~~i~~~~~s~~g~~l~~~s~d-~-- 218 (231)
..+...+..++|+| ||+.|+....+ ..|.++|+..++. ..+..... ..+..++|+|||+.|+..+.+ +
T Consensus 184 ~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~ 262 (388)
T 3pe7_A 184 LQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSP 262 (388)
T ss_dssp EEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCCTTEEEEEEEECTTSSCEEEEEEETTCC
T ss_pred ecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCCCCcccccceECCCCCEEEEEecCCCCC
Confidence 44566789999999 99988877653 3788888876543 33332221 246678999999988665542 2
Q ss_pred --eEEEEeCC
Q psy4391 219 --TLKLWDSY 226 (231)
Q Consensus 219 --~v~vwd~~ 226 (231)
.|.+||..
T Consensus 263 ~~~l~~~d~~ 272 (388)
T 3pe7_A 263 DRFIYSADPE 272 (388)
T ss_dssp CEEEEEECTT
T ss_pred cceEEEEecC
Confidence 39999964
No 163
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.83 E-value=6.9e-20 Score=154.06 Aligned_cols=193 Identities=14% Similarity=0.178 Sum_probs=136.6
Q ss_pred ceEEEEECCCCCEEEEEeC---------CCcEEEeecCCCcEE--EEEecccccEEEEEECCCCCEEEEecCCCcEEEEe
Q psy4391 29 AVSSVKFSPNGEWLASSSA---------DKLIKIWGAYDGKFE--KTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWE 97 (231)
Q Consensus 29 ~i~~~~~~~~~~~l~~~~~---------dg~i~i~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d 97 (231)
.+.+++|||||++|+.++. ++.|++||..+++.. ..+ ...+..++|+|||+.|+.+. ++.|++|+
T Consensus 61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~ 136 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQ 136 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEES
T ss_pred ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceec---CcccccceECCCCCEEEEEE-CCeEEEEe
Confidence 3889999999999988765 689999999877541 122 24577899999999998885 77999999
Q ss_pred CCCceeeeeec-CCCcce-----------------EEEEECCCCCEEEEeecCC--------------------------
Q psy4391 98 LSSGKCLKTLK-GHSNYV-----------------FCCNFNPQSNLIVSGSFDE-------------------------- 133 (231)
Q Consensus 98 ~~~~~~~~~~~-~~~~~v-----------------~~~~~~~~~~~l~~~~~d~-------------------------- 133 (231)
+.+++..+... ++...+ ..+.|+|||+.|++++.|.
T Consensus 137 ~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~ 216 (719)
T 1z68_A 137 RPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPK 216 (719)
T ss_dssp STTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCB
T ss_pred CCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCC
Confidence 98877544332 211112 3789999999999987652
Q ss_pred --------cEEEEECCCCcee--------eeccCCCCCeEEEEEcCCCCeEEEEecC----CeEEEEe----CCCCceee
Q psy4391 134 --------SVRIWDVRTGKCL--------KTLPAHSDPVSAVHFNRDGSLIVSSSYD----GLCRIWD----TASGQCLK 189 (231)
Q Consensus 134 --------~i~v~d~~~~~~~--------~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~v~d----~~~~~~~~ 189 (231)
.|++||+.+++.. ..+..+...+..++|+||++++++.... ..|.+|| +.+++...
T Consensus 217 ~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~ 296 (719)
T 1z68_A 217 AGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPK 296 (719)
T ss_dssp TTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCG
T ss_pred CCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEE
Confidence 6889999887642 1233566788999999998777664332 2588899 87776544
Q ss_pred eee---cCCCCCeE-----EEEECCCCCEEEE--EeCCC--eEEEEeC
Q psy4391 190 TLI---DDDNPPVS-----FVKFSPNGKYILA--ATLDN--TLKLWDS 225 (231)
Q Consensus 190 ~~~---~~~~~~i~-----~~~~s~~g~~l~~--~s~d~--~v~vwd~ 225 (231)
.+. ..+...+. .++|+|||+.++. ...+| .|.+||.
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~ 344 (719)
T 1z68_A 297 TQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKD 344 (719)
T ss_dssp GGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESS
T ss_pred EEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEEC
Confidence 332 23333333 6789999996655 43455 5666664
No 164
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.82 E-value=1.1e-18 Score=147.35 Aligned_cols=196 Identities=12% Similarity=0.152 Sum_probs=143.0
Q ss_pred cceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEeccccc-----EEEEEECCCCCEEEEecCC---------CcE
Q psy4391 28 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG-----ISDVAWSSDSRLLVSGSDD---------KTL 93 (231)
Q Consensus 28 ~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~l~~~~~~---------g~i 93 (231)
.....+.|+|+|++++++ ||.|++|+..+++....+.++... ..++.|+|||++|+.++.+ +.+
T Consensus 17 ~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~ 94 (740)
T 4a5s_A 17 LKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASY 94 (740)
T ss_dssp CCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEE
T ss_pred ccccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEE
Confidence 345689999999988886 999999999998877777665432 2347899999999988875 567
Q ss_pred EEEeCCCceeeeeecCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeecc-CCCCCe----------------
Q psy4391 94 KIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLP-AHSDPV---------------- 156 (231)
Q Consensus 94 ~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~~v---------------- 156 (231)
.+||+.+++... +..+...+....|+|||+.||.+. ++.|++||+.+++...... .+...+
T Consensus 95 ~~~d~~~~~~~~-l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~ 172 (740)
T 4a5s_A 95 DIYDLNKRQLIT-EERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSA 172 (740)
T ss_dssp EEEETTTTEECC-SSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSS
T ss_pred EEEECCCCcEEE-cccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCC
Confidence 799999988643 555667788999999999999884 6899999998876543221 222222
Q ss_pred -EEEEEcCCCCeEEEEecCC------------------------------------eEEEEeCCC---Cc--eeeeeec-
Q psy4391 157 -SAVHFNRDGSLIVSSSYDG------------------------------------LCRIWDTAS---GQ--CLKTLID- 193 (231)
Q Consensus 157 -~~~~~~~~~~~l~~~~~dg------------------------------------~i~v~d~~~---~~--~~~~~~~- 193 (231)
..+.|+|||+.|+..+.|. .|.+||+.+ ++ ....+..
T Consensus 173 ~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~ 252 (740)
T 4a5s_A 173 YSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAP 252 (740)
T ss_dssp SBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCC
T ss_pred CcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCC
Confidence 3489999999998875321 578899988 63 1222221
Q ss_pred ----CCCCCeEEEEECCCCCEEEEEeC----CCeEEEEeCCC
Q psy4391 194 ----DDNPPVSFVKFSPNGKYILAATL----DNTLKLWDSYP 227 (231)
Q Consensus 194 ----~~~~~i~~~~~s~~g~~l~~~s~----d~~v~vwd~~~ 227 (231)
.+...+..++|+|||+.++.... +..|.+||...
T Consensus 253 ~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~t 294 (740)
T 4a5s_A 253 ASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDE 294 (740)
T ss_dssp HHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEET
T ss_pred ccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCC
Confidence 13445778999999997766543 23799999643
No 165
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.82 E-value=3.2e-18 Score=133.06 Aligned_cols=197 Identities=14% Similarity=0.136 Sum_probs=136.5
Q ss_pred eEEEEECCCCCE--EEEEe-------------CCCcEEEeecC-CCcEEEEEe----cccccEEEEEECCCCCEEEEec-
Q psy4391 30 VSSVKFSPNGEW--LASSS-------------ADKLIKIWGAY-DGKFEKTIS----GHKLGISDVAWSSDSRLLVSGS- 88 (231)
Q Consensus 30 i~~~~~~~~~~~--l~~~~-------------~dg~i~i~~~~-~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~- 88 (231)
...++|+|+|++ ++++. .+|.+.+|++. +++....+. .+...+..++|+|+|++++++.
T Consensus 85 ~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~ 164 (365)
T 1jof_A 85 PRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADL 164 (365)
T ss_dssp GGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEET
T ss_pred CccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcC
Confidence 455789999994 44543 68899999986 455544333 1345688999999999887765
Q ss_pred CCCcEEEEeCC-Cceee--eeec--CCCcceEEEEECCCCCEEEEeec-CCcEEEEECC--CCcee------eeccCC--
Q psy4391 89 DDKTLKIWELS-SGKCL--KTLK--GHSNYVFCCNFNPQSNLIVSGSF-DESVRIWDVR--TGKCL------KTLPAH-- 152 (231)
Q Consensus 89 ~~g~i~~~d~~-~~~~~--~~~~--~~~~~v~~~~~~~~~~~l~~~~~-d~~i~v~d~~--~~~~~------~~~~~~-- 152 (231)
.++.|++|+++ +++.. ..+. .+...+..++|+|+|+++++++. ++.+.+|++. +++.. ..+...
T Consensus 165 ~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~ 244 (365)
T 1jof_A 165 TANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIP 244 (365)
T ss_dssp TTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCC
T ss_pred CCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcC
Confidence 36799999998 66542 2233 22456788999999999888775 6789999765 45432 122211
Q ss_pred --CC------CeEEEE-EcCCCCeEEEEecCC------eEEEEeCC-CCceeee--eecCCCCCeEEEEECC---CCCEE
Q psy4391 153 --SD------PVSAVH-FNRDGSLIVSSSYDG------LCRIWDTA-SGQCLKT--LIDDDNPPVSFVKFSP---NGKYI 211 (231)
Q Consensus 153 --~~------~v~~~~-~~~~~~~l~~~~~dg------~i~v~d~~-~~~~~~~--~~~~~~~~i~~~~~s~---~g~~l 211 (231)
.. .+..++ |+|||++|+++..+. .|.+|++. +++.... ...........++|+| ||++|
T Consensus 245 g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l 324 (365)
T 1jof_A 245 DRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWM 324 (365)
T ss_dssp CBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEE
T ss_pred CcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEE
Confidence 11 478899 999999988766432 89999986 5554321 1211222234578999 89999
Q ss_pred EEEeCC-CeEEEEeCC
Q psy4391 212 LAATLD-NTLKLWDSY 226 (231)
Q Consensus 212 ~~~s~d-~~v~vwd~~ 226 (231)
+++..+ +.|.+|+..
T Consensus 325 ~v~~~~~~~v~v~~~~ 340 (365)
T 1jof_A 325 AITDDQEGWLEIYRWK 340 (365)
T ss_dssp EEECSSSCEEEEEEEE
T ss_pred EEEEcCCCeEEEEEEc
Confidence 999875 899999864
No 166
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.80 E-value=7e-17 Score=123.77 Aligned_cols=200 Identities=12% Similarity=0.110 Sum_probs=147.7
Q ss_pred cccceEEEEECCCCCEEEEEeCCCcEEEeecCCCc-EEEEEe---------cccccEEEEEECC-CCCEEEEec-CCCcE
Q psy4391 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-FEKTIS---------GHKLGISDVAWSS-DSRLLVSGS-DDKTL 93 (231)
Q Consensus 26 h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~-~~~~~~---------~~~~~v~~~~~~~-~~~~l~~~~-~~g~i 93 (231)
+-.....++++++|+++++...++.|++|+..... ....+. .+......++++| +++.+++.+ .++.|
T Consensus 89 ~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I 168 (329)
T 3fvz_A 89 LFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRI 168 (329)
T ss_dssp TCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEE
T ss_pred ccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeE
Confidence 34578899999999988888888999999975432 333442 2233578999999 788777775 68999
Q ss_pred EEEeCCCceeeeeecC----------CCcceEEEEECCC-CCEEEEeecCCcEEEEECCCCceeeecc--CCCCCeEEEE
Q psy4391 94 KIWELSSGKCLKTLKG----------HSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVRTGKCLKTLP--AHSDPVSAVH 160 (231)
Q Consensus 94 ~~~d~~~~~~~~~~~~----------~~~~v~~~~~~~~-~~~l~~~~~d~~i~v~d~~~~~~~~~~~--~~~~~v~~~~ 160 (231)
++|+. +++.+..+.. +-.....++++|+ +.++++...++.|++||..+++.+..+. .+...+.+++
T Consensus 169 ~~~~~-~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~ 247 (329)
T 3fvz_A 169 VQFSP-SGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAIS 247 (329)
T ss_dssp EEECT-TSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEE
T ss_pred EEEcC-CCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceee
Confidence 99994 4555555531 1233778999998 7777777888999999999888777763 3456788999
Q ss_pred EcC------CCCeEEEEecCCeEEEEeCCCCceeeeee--cCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCC
Q psy4391 161 FNR------DGSLIVSSSYDGLCRIWDTASGQCLKTLI--DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSY 226 (231)
Q Consensus 161 ~~~------~~~~l~~~~~dg~i~v~d~~~~~~~~~~~--~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~~ 226 (231)
++| +++.+++...+..+.+||+.+++.+..+. .........++++|+|..+++...+++|++|+..
T Consensus 248 ~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~ 321 (329)
T 3fvz_A 248 YIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLT 321 (329)
T ss_dssp EETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEE
T ss_pred ecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCC
Confidence 999 33333333345589999999998777653 1233446789999999888888889999999963
No 167
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.79 E-value=6.6e-16 Score=115.82 Aligned_cols=196 Identities=16% Similarity=0.267 Sum_probs=145.6
Q ss_pred cccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEec------ccccEEEEEE-CCCCCEEEEecC-CCcEEEEe
Q psy4391 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG------HKLGISDVAW-SSDSRLLVSGSD-DKTLKIWE 97 (231)
Q Consensus 26 h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~------~~~~v~~~~~-~~~~~~l~~~~~-~g~i~~~d 97 (231)
+-....+++++++|+++++...++.|.+|+.. ++....+.. +...+..+++ .++++.+++... ++.|.+||
T Consensus 28 ~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d 106 (286)
T 1q7f_A 28 QFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN 106 (286)
T ss_dssp CBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC
T ss_pred ccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC
Confidence 44678999999999988887888999999976 555555532 2346788999 567776666543 78999999
Q ss_pred CCCceeeeeecC-CCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeecc--CCCCCeEEEEEcCCCCeEEEEecC
Q psy4391 98 LSSGKCLKTLKG-HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLP--AHSDPVSAVHFNRDGSLIVSSSYD 174 (231)
Q Consensus 98 ~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d 174 (231)
.+++.+..+.. +...+..++++|+++++++...++.|.+||.. ++.+..+. .+...+..++++|+++++++...+
T Consensus 107 -~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~ 184 (286)
T 1q7f_A 107 -QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRA 184 (286)
T ss_dssp -TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGG
T ss_pred -CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCC
Confidence 45565555532 33567889999999988887788999999965 45444443 334568899999999988887889
Q ss_pred CeEEEEeCCCCceeeeeecCC-CCCeEEEEECCCCCEEEEEeCCC-eEEEEeC
Q psy4391 175 GLCRIWDTASGQCLKTLIDDD-NPPVSFVKFSPNGKYILAATLDN-TLKLWDS 225 (231)
Q Consensus 175 g~i~v~d~~~~~~~~~~~~~~-~~~i~~~~~s~~g~~l~~~s~d~-~v~vwd~ 225 (231)
+.|.+||.. ++.+..+.... ......++++++|+++++...++ .|.+||.
T Consensus 185 ~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~ 236 (286)
T 1q7f_A 185 HCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ 236 (286)
T ss_dssp TEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT
T ss_pred CEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC
Confidence 999999985 44444443221 24567899999999888887776 9999995
No 168
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.79 E-value=1e-17 Score=141.41 Aligned_cols=194 Identities=11% Similarity=0.120 Sum_probs=133.5
Q ss_pred EEEEECCCCCEEEEEeCC---------CcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEecCCCcEEEEeCCCc
Q psy4391 31 SSVKFSPNGEWLASSSAD---------KLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSG 101 (231)
Q Consensus 31 ~~~~~~~~~~~l~~~~~d---------g~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~~~ 101 (231)
..+.|||||++|+.++.+ +.+.+||..+++.. .+..+...+...+|+|||+.||.+. ++.|++|++.++
T Consensus 65 ~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~ 142 (740)
T 4a5s_A 65 NDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNL 142 (740)
T ss_dssp CEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTS
T ss_pred cceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCC
Confidence 447899999999887765 56679999887643 4555666789999999999998884 689999999887
Q ss_pred eeeeeec-CCCcce-----------------EEEEECCCCCEEEEeecCC------------------------------
Q psy4391 102 KCLKTLK-GHSNYV-----------------FCCNFNPQSNLIVSGSFDE------------------------------ 133 (231)
Q Consensus 102 ~~~~~~~-~~~~~v-----------------~~~~~~~~~~~l~~~~~d~------------------------------ 133 (231)
+..+... ++...+ ..+.|+|||+.|+..+.|.
T Consensus 143 ~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G 222 (740)
T 4a5s_A 143 PSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAG 222 (740)
T ss_dssp CCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTT
T ss_pred ceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCc
Confidence 6543222 211112 2478999999998875321
Q ss_pred ------cEEEEECCC---Cc--eeeecc------CCCCCeEEEEEcCCCCeEEEEec----CCeEEEEeCCCCc----ee
Q psy4391 134 ------SVRIWDVRT---GK--CLKTLP------AHSDPVSAVHFNRDGSLIVSSSY----DGLCRIWDTASGQ----CL 188 (231)
Q Consensus 134 ------~i~v~d~~~---~~--~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~----dg~i~v~d~~~~~----~~ 188 (231)
.|++||+.+ ++ ....+. .+...+..++|+|||+.++.... +..|.+||+.+++ +.
T Consensus 223 ~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~ 302 (740)
T 4a5s_A 223 AVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCL 302 (740)
T ss_dssp SCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEEC
T ss_pred CcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCcccccee
Confidence 478899988 63 122332 25667899999999997665432 2379999998876 22
Q ss_pred --eee-ecCCCCCe-----EEEEECCCCCEEE-EEeC-CC--eEEEEeCC
Q psy4391 189 --KTL-IDDDNPPV-----SFVKFSPNGKYIL-AATL-DN--TLKLWDSY 226 (231)
Q Consensus 189 --~~~-~~~~~~~i-----~~~~~s~~g~~l~-~~s~-d~--~v~vwd~~ 226 (231)
..+ ...+...+ ..++|+|||+.++ ..+. +| .|.+||..
T Consensus 303 ~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~ 352 (740)
T 4a5s_A 303 VARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQID 352 (740)
T ss_dssp GGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETT
T ss_pred EEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECC
Confidence 111 12222222 2578999999877 6653 44 67777753
No 169
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.78 E-value=2.4e-16 Score=120.79 Aligned_cols=198 Identities=13% Similarity=0.117 Sum_probs=145.5
Q ss_pred ccceEEEEECCCCCEEEEEeCC------------------------CcEEEeecCCCcEEEEEe-cccccEEEEEECCCC
Q psy4391 27 TKAVSSVKFSPNGEWLASSSAD------------------------KLIKIWGAYDGKFEKTIS-GHKLGISDVAWSSDS 81 (231)
Q Consensus 27 ~~~i~~~~~~~~~~~l~~~~~d------------------------g~i~i~~~~~~~~~~~~~-~~~~~v~~~~~~~~~ 81 (231)
-+.+.+++++++|+++++...+ +.|.+||..+++....+. .+......++++|+|
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 4679999999999988887666 479999998887766554 333468899999999
Q ss_pred CEEEEecCCCcEEEEeCCCce-eeeee---------cCCCcceEEEEECC-CCCEEEEee-cCCcEEEEECCCCceeeec
Q psy4391 82 RLLVSGSDDKTLKIWELSSGK-CLKTL---------KGHSNYVFCCNFNP-QSNLIVSGS-FDESVRIWDVRTGKCLKTL 149 (231)
Q Consensus 82 ~~l~~~~~~g~i~~~d~~~~~-~~~~~---------~~~~~~v~~~~~~~-~~~~l~~~~-~d~~i~v~d~~~~~~~~~~ 149 (231)
+.+++...++.|++|+..... .+..+ ..+......++++| ++.++++.+ .++.|++|| ..++.+..+
T Consensus 103 ~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~ 181 (329)
T 3fvz_A 103 NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQW 181 (329)
T ss_dssp CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEE
T ss_pred CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEe
Confidence 988888889999999986542 34444 22334678899999 788888876 689999999 456665555
Q ss_pred cCC----------CCCeEEEEEcCC-CCeEEEEecCCeEEEEeCCCCceeeeeec-CCCCCeEEEEECC------CCCEE
Q psy4391 150 PAH----------SDPVSAVHFNRD-GSLIVSSSYDGLCRIWDTASGQCLKTLID-DDNPPVSFVKFSP------NGKYI 211 (231)
Q Consensus 150 ~~~----------~~~v~~~~~~~~-~~~l~~~~~dg~i~v~d~~~~~~~~~~~~-~~~~~i~~~~~s~------~g~~l 211 (231)
... -.....++++|+ +.++++...++.|++||..+++.+..+.. .....+..++++| +|+..
T Consensus 182 ~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~ 261 (329)
T 3fvz_A 182 GEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPY 261 (329)
T ss_dssp CEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCC
T ss_pred ccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEE
Confidence 322 124789999998 77777777889999999998887776643 2334567888999 33322
Q ss_pred EEEeCCCeEEEEeC
Q psy4391 212 LAATLDNTLKLWDS 225 (231)
Q Consensus 212 ~~~s~d~~v~vwd~ 225 (231)
++...++.|.+||.
T Consensus 262 v~~~~~~~v~~~~~ 275 (329)
T 3fvz_A 262 FGDQEPVQGFVMNF 275 (329)
T ss_dssp TTCSCCCCEEEEET
T ss_pred eccCCCcEEEEEEc
Confidence 33333458999985
No 170
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.78 E-value=1.4e-17 Score=138.82 Aligned_cols=190 Identities=16% Similarity=0.167 Sum_probs=135.3
Q ss_pred EEEEC--CCCCE-EEEEeC-CCcEEEeecC--CCcEEEEEec-----ccccEEEEEECCCCCEEEEecCC----------
Q psy4391 32 SVKFS--PNGEW-LASSSA-DKLIKIWGAY--DGKFEKTISG-----HKLGISDVAWSSDSRLLVSGSDD---------- 90 (231)
Q Consensus 32 ~~~~~--~~~~~-l~~~~~-dg~i~i~~~~--~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~~---------- 90 (231)
...|+ |||+. |+.+.. +..|.+++.. .......+.. +...+..++|+|||+.|++++.+
T Consensus 81 ~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~ 160 (662)
T 3azo_A 81 PWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVR 160 (662)
T ss_dssp CEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEE
T ss_pred cceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCce
Confidence 55565 99998 776543 5566666664 2033444544 45678899999999999988776
Q ss_pred CcEEEEeCCC------ceeeeeec-CCCcceEEEEECCCCCEEEEeecCC--------cEEEEECC-CC---ceeeeccC
Q psy4391 91 KTLKIWELSS------GKCLKTLK-GHSNYVFCCNFNPQSNLIVSGSFDE--------SVRIWDVR-TG---KCLKTLPA 151 (231)
Q Consensus 91 g~i~~~d~~~------~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~--------~i~v~d~~-~~---~~~~~~~~ 151 (231)
..|++||+.+ ++.. .+. .+...+..+.|+|||+.|+..+.++ .|++||+. ++ +.......
T Consensus 161 ~~i~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~ 239 (662)
T 3azo_A 161 RFLAAVPLDGSAAADRSAVR-ELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGG 239 (662)
T ss_dssp EEEEEEETTSTTTTCGGGSE-ESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEE
T ss_pred eEEEEEECCCCccccCCcee-EEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCC
Confidence 5899999988 5543 444 4455677789999999999887553 79999998 56 33333334
Q ss_pred CCCCeEEEEEcCCCCeEEEEecCC--eEEEEeCCCCceeeeeecCCCC--------CeEEEEECCCCCEEEEEeCCCeEE
Q psy4391 152 HSDPVSAVHFNRDGSLIVSSSYDG--LCRIWDTASGQCLKTLIDDDNP--------PVSFVKFSPNGKYILAATLDNTLK 221 (231)
Q Consensus 152 ~~~~v~~~~~~~~~~~l~~~~~dg--~i~v~d~~~~~~~~~~~~~~~~--------~i~~~~~s~~g~~l~~~s~d~~v~ 221 (231)
+...+..+.|+|||++++++..++ .|.+||+.+++..... ..+.. .+..++|+|+++++++++. +.++
T Consensus 240 ~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~-~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~ 317 (662)
T 3azo_A 240 PEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLC-RREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAV 317 (662)
T ss_dssp TTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESS-CCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCE
T ss_pred CCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecc-cccccccCccccccCceEeEeCCCEEEEEEEc-CccE
Confidence 467889999999999777887788 6777787666543322 22111 1456889999999999988 9999
Q ss_pred EEe
Q psy4391 222 LWD 224 (231)
Q Consensus 222 vwd 224 (231)
+|.
T Consensus 318 l~~ 320 (662)
T 3azo_A 318 LGI 320 (662)
T ss_dssp EEE
T ss_pred EEE
Confidence 993
No 171
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.78 E-value=2.2e-17 Score=137.59 Aligned_cols=202 Identities=13% Similarity=0.108 Sum_probs=144.8
Q ss_pred eecccccceEEEEECCCCCEEEEE--eCCCcEEEeecCCCcEEEEEecccccEE---------EEEEC--CCCCE-EEEe
Q psy4391 22 TLAGHTKAVSSVKFSPNGEWLASS--SADKLIKIWGAYDGKFEKTISGHKLGIS---------DVAWS--SDSRL-LVSG 87 (231)
Q Consensus 22 ~~~~h~~~i~~~~~~~~~~~l~~~--~~dg~i~i~~~~~~~~~~~~~~~~~~v~---------~~~~~--~~~~~-l~~~ 87 (231)
.+.+|...+..++|++++-.++.. +.++...+|....+.....+..+...+. ...|+ |||+. |+.+
T Consensus 18 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~ 97 (662)
T 3azo_A 18 LVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFT 97 (662)
T ss_dssp HHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEE
T ss_pred HHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEE
Confidence 345788999999999876566665 5578889998654555566665554544 55565 99998 7665
Q ss_pred cC-CCcEEEEeCC--C-ceeeeeecC-----CCcceEEEEECCCCCEEEEeecC----------CcEEEEECCC------
Q psy4391 88 SD-DKTLKIWELS--S-GKCLKTLKG-----HSNYVFCCNFNPQSNLIVSGSFD----------ESVRIWDVRT------ 142 (231)
Q Consensus 88 ~~-~g~i~~~d~~--~-~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~d----------~~i~v~d~~~------ 142 (231)
+. +..|+++++. + ++ ...+.. +...+..++|+|||+.|++++.+ ..|++||+.+
T Consensus 98 ~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 176 (662)
T 3azo_A 98 HFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADR 176 (662)
T ss_dssp BTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCG
T ss_pred ECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccC
Confidence 54 5677777776 3 43 334444 45667889999999999988876 5799999987
Q ss_pred Cceeeecc-CCCCCeEEEEEcCCCCeEEEEecC--------CeEEEEeCC-CCc--eeeeeecCCCCCeEEEEECCCCCE
Q psy4391 143 GKCLKTLP-AHSDPVSAVHFNRDGSLIVSSSYD--------GLCRIWDTA-SGQ--CLKTLIDDDNPPVSFVKFSPNGKY 210 (231)
Q Consensus 143 ~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d--------g~i~v~d~~-~~~--~~~~~~~~~~~~i~~~~~s~~g~~ 210 (231)
++ ...+. .+...+..++|+|||++|+.++.+ ..|.+||+. +++ ....+...+...+..++|+|||++
T Consensus 177 ~~-~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l 255 (662)
T 3azo_A 177 SA-VRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSL 255 (662)
T ss_dssp GG-SEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCE
T ss_pred Cc-eeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeE
Confidence 44 34444 555667788999999999887755 379999998 561 334444443456788999999997
Q ss_pred EEEEeCCC--eEEEEeC
Q psy4391 211 ILAATLDN--TLKLWDS 225 (231)
Q Consensus 211 l~~~s~d~--~v~vwd~ 225 (231)
++++..++ .|.+||.
T Consensus 256 ~~~~~~~~~~~l~~~~~ 272 (662)
T 3azo_A 256 IVATDRTGWWNLHRVDP 272 (662)
T ss_dssp EEEECTTSSCEEEEECT
T ss_pred EEEECCCCCeEEEEEEC
Confidence 77777788 5666653
No 172
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.77 E-value=3.1e-16 Score=121.72 Aligned_cols=191 Identities=14% Similarity=0.133 Sum_probs=127.3
Q ss_pred EEEECCCCCEEEEEe----------CCCcEEEeecCCCcEEEEEecc------cccEEEEEECCCCCEEEEecC--CCcE
Q psy4391 32 SVKFSPNGEWLASSS----------ADKLIKIWGAYDGKFEKTISGH------KLGISDVAWSSDSRLLVSGSD--DKTL 93 (231)
Q Consensus 32 ~~~~~~~~~~l~~~~----------~dg~i~i~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~--~g~i 93 (231)
.++|+|+|+++++++ .++.|.+||..+.+....+... ......++++|+|++++++.. ++.|
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v 133 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSI 133 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEE
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeE
Confidence 899999999998876 2567999999888877776532 123556899999999988764 5789
Q ss_pred EEEeCCCceeeee-ecCCCcceEEEEECCCC-CEEEEeecCCc-------------------------------------
Q psy4391 94 KIWELSSGKCLKT-LKGHSNYVFCCNFNPQS-NLIVSGSFDES------------------------------------- 134 (231)
Q Consensus 94 ~~~d~~~~~~~~~-~~~~~~~v~~~~~~~~~-~~l~~~~~d~~------------------------------------- 134 (231)
.+||+++++.+.. +..... ..+.+.|++ ..+++.+.||.
T Consensus 134 ~v~d~~~~~~~~~~i~~~~~--~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g 211 (361)
T 2oiz_A 134 GIVDVAKGDYVEDVTAAAGC--WSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDK 211 (361)
T ss_dssp EEEETTTTEEEEEEGGGTTE--EEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECS
T ss_pred EEEECCCCcEEEEEecCCCc--ceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccC
Confidence 9999999887766 442211 112223322 23333333333
Q ss_pred -----------EEEEECCCCce--eeeccC----------CCCCeEEEEEcCCCCeEEEEec-----------CCeEEEE
Q psy4391 135 -----------VRIWDVRTGKC--LKTLPA----------HSDPVSAVHFNRDGSLIVSSSY-----------DGLCRIW 180 (231)
Q Consensus 135 -----------i~v~d~~~~~~--~~~~~~----------~~~~v~~~~~~~~~~~l~~~~~-----------dg~i~v~ 180 (231)
+.++|+..+.. ...+.. .......++|+|+++.++++.. .+.|.+|
T Consensus 212 ~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~vi 291 (361)
T 2oiz_A 212 DKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVM 291 (361)
T ss_dssp SEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEE
T ss_pred CEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEE
Confidence 44444432211 000000 0011112688999888776643 3489999
Q ss_pred eCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCC
Q psy4391 181 DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSYPC 228 (231)
Q Consensus 181 d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~~~~ 228 (231)
|+.+++.+.++.... ...++|+|||++|+++.. +.|.+||....
T Consensus 292 D~~t~~~v~~i~~~~---p~~ia~spdg~~l~v~n~-~~v~v~D~~t~ 335 (361)
T 2oiz_A 292 DTKTKQRVARIPGRD---ALSMTIDQQRNLMLTLDG-GNVNVYDISQP 335 (361)
T ss_dssp ETTTTEEEEEEECTT---CCEEEEETTTTEEEEECS-SCEEEEECSSS
T ss_pred ECCCCcEEEEEecCC---eeEEEECCCCCEEEEeCC-CeEEEEECCCC
Confidence 999999888876554 578999999999998886 99999997553
No 173
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.77 E-value=4.3e-16 Score=117.50 Aligned_cols=195 Identities=12% Similarity=0.057 Sum_probs=141.0
Q ss_pred ccccceEEEEECCCCC-EEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEecCCCcEEEEeCCCcee
Q psy4391 25 GHTKAVSSVKFSPNGE-WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKC 103 (231)
Q Consensus 25 ~h~~~i~~~~~~~~~~-~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~ 103 (231)
.+.....+++|+|+|+ +++++..++.|..|+..++ ...+..+...+..++++++|+++++...++.|.+||.++++.
T Consensus 25 ~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~ 102 (296)
T 3e5z_A 25 DGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEW 102 (296)
T ss_dssp CCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCE
T ss_pred cCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcE
Confidence 4556678999999998 7778888899999998776 455555666789999999999888777778999999977765
Q ss_pred eeeecCC----CcceEEEEECCCCCEEEE----ee-------------cCCcEEEEECCCCceeeeccCCCCCeEEEEEc
Q psy4391 104 LKTLKGH----SNYVFCCNFNPQSNLIVS----GS-------------FDESVRIWDVRTGKCLKTLPAHSDPVSAVHFN 162 (231)
Q Consensus 104 ~~~~~~~----~~~v~~~~~~~~~~~l~~----~~-------------~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~ 162 (231)
....... ...+..++++|+|+++++ |. ..+.|..++.. ++ +..+..+......++|+
T Consensus 103 ~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~~~~~~~~~gi~~s 180 (296)
T 3e5z_A 103 ESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-LSAPIRDRVKPNGLAFL 180 (296)
T ss_dssp EEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-EEEEECCCSSEEEEEEC
T ss_pred EEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-EEEeecCCCCCccEEEC
Confidence 4332211 123456889999998887 33 13456666665 43 33344445567899999
Q ss_pred CCCCeEEEEecCCeEEEEeCC-CCce---eeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCC
Q psy4391 163 RDGSLIVSSSYDGLCRIWDTA-SGQC---LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSY 226 (231)
Q Consensus 163 ~~~~~l~~~~~dg~i~v~d~~-~~~~---~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~~ 226 (231)
|+++.+++.+.++.|.+||+. +++. ...+ .........++++++|+++++. ++.|.+||..
T Consensus 181 ~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~-~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~ 245 (296)
T 3e5z_A 181 PSGNLLVSDTGDNATHRYCLNARGETEYQGVHF-TVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD 245 (296)
T ss_dssp TTSCEEEEETTTTEEEEEEECSSSCEEEEEEEE-CCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT
T ss_pred CCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEe-eCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC
Confidence 999988777778999999986 4443 2222 2222334568999999866655 8899999963
No 174
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.76 E-value=3.5e-15 Score=114.19 Aligned_cols=203 Identities=7% Similarity=0.055 Sum_probs=144.4
Q ss_pred eecccccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEecCC----CcEEEEe
Q psy4391 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDD----KTLKIWE 97 (231)
Q Consensus 22 ~~~~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~----g~i~~~d 97 (231)
.+..+...+.+++|+++|++++++..++.|.+|+..+++.......+...+..++++|+++.+++...+ +.|.+||
T Consensus 39 ~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d 118 (333)
T 2dg1_A 39 EISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAAT 118 (333)
T ss_dssp EEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEEC
T ss_pred EEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEe
Confidence 344566678999999999987888888999999988776655443445679999999999887777666 6899999
Q ss_pred CCCceeeeeec--CCCcceEEEEECCCCCEEEEeec------CCcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeEE
Q psy4391 98 LSSGKCLKTLK--GHSNYVFCCNFNPQSNLIVSGSF------DESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIV 169 (231)
Q Consensus 98 ~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~------d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 169 (231)
.+++.....+. .....+..+.++|+++++++... .+.|..+|..+++... +......+..++|+|+++.++
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~i~~~~dg~~l~ 197 (333)
T 2dg1_A 119 ENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTP-IIQNISVANGIALSTDEKVLW 197 (333)
T ss_dssp TTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEE-EEEEESSEEEEEECTTSSEEE
T ss_pred CCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEE-eecCCCcccceEECCCCCEEE
Confidence 98766443332 23356888999999988876653 3567777766554322 222234578899999998665
Q ss_pred -EEecCCeEEEEeCCC-Cceeeee----e-c-CCCCCeEEEEECCCCCEEEEEeCCCeEEEEeC
Q psy4391 170 -SSSYDGLCRIWDTAS-GQCLKTL----I-D-DDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225 (231)
Q Consensus 170 -~~~~dg~i~v~d~~~-~~~~~~~----~-~-~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~ 225 (231)
+...++.|.+||+.+ ++.+..+ . . ........++++++|+++++...++.|.+||.
T Consensus 198 v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~ 261 (333)
T 2dg1_A 198 VTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK 261 (333)
T ss_dssp EEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT
T ss_pred EEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEECC
Confidence 445678999999863 3322111 1 1 11124577999999998888777899999986
No 175
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.76 E-value=4.6e-16 Score=130.82 Aligned_cols=198 Identities=15% Similarity=0.153 Sum_probs=139.1
Q ss_pred cccceEEEEECCCCCEEEEEeCC-C----cEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEecCCCc--------
Q psy4391 26 HTKAVSSVKFSPNGEWLASSSAD-K----LIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKT-------- 92 (231)
Q Consensus 26 h~~~i~~~~~~~~~~~l~~~~~d-g----~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~-------- 92 (231)
|...+..++|||||++|+.+..+ | .|++||+.+++....... ...+..++|+|||+.|+.+..++.
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~-~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~ 201 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLE-RVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTE 201 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEE-EECSCCEEECTTSSEEEEEECCCCSSCCSSSC
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCccccc-CcccceEEEEeCCCEEEEEEECCccccccccc
Confidence 44468899999999999865443 3 899999988876553322 223567899999999998877665
Q ss_pred --------EEEEeCCCcee--eeeec--CCCcceEEEEECCCCCEEEEeec-----CCcEEEEECCC------Cc-eeee
Q psy4391 93 --------LKIWELSSGKC--LKTLK--GHSNYVFCCNFNPQSNLIVSGSF-----DESVRIWDVRT------GK-CLKT 148 (231)
Q Consensus 93 --------i~~~d~~~~~~--~~~~~--~~~~~v~~~~~~~~~~~l~~~~~-----d~~i~v~d~~~------~~-~~~~ 148 (231)
|++|++.+++. ..... .+...+..+.|+|+|++|+..+. +..|++||+.+ +. ....
T Consensus 202 ~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 281 (710)
T 2xdw_A 202 TSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVK 281 (710)
T ss_dssp CCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEE
T ss_pred cccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEE
Confidence 99999987652 12222 23445678899999999988765 56799999986 43 3455
Q ss_pred ccCCCCCeEEEEEcCCCCeEEEEecC----CeEEEEeCCCCc--eeeeeecCCC-CCeEEEEECCCCCEEEEEeCCCe--
Q psy4391 149 LPAHSDPVSAVHFNRDGSLIVSSSYD----GLCRIWDTASGQ--CLKTLIDDDN-PPVSFVKFSPNGKYILAATLDNT-- 219 (231)
Q Consensus 149 ~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~v~d~~~~~--~~~~~~~~~~-~~i~~~~~s~~g~~l~~~s~d~~-- 219 (231)
+..+...+.. .|+|+|+.|+..+.. +.|.+||+.++. ....+..+.. ..+..++|++++.++++...|+.
T Consensus 282 l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~ 360 (710)
T 2xdw_A 282 LIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNT 360 (710)
T ss_dssp EECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEE
T ss_pred eeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEE
Confidence 5555555544 488899887766543 369999998764 2344443333 35777889888888888888885
Q ss_pred EEEEeC
Q psy4391 220 LKLWDS 225 (231)
Q Consensus 220 v~vwd~ 225 (231)
|.+||.
T Consensus 361 l~~~~~ 366 (710)
T 2xdw_A 361 LQLHDL 366 (710)
T ss_dssp EEEEET
T ss_pred EEEEEC
Confidence 555554
No 176
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.75 E-value=7.1e-18 Score=131.82 Aligned_cols=194 Identities=9% Similarity=-0.009 Sum_probs=133.0
Q ss_pred eEEEEECCCCCEEEEEeCC-C--cEEEeecCCCcEEEEEecccccE-EEEEECCCCCEEEEecCCCcEEEEeCCCceeee
Q psy4391 30 VSSVKFSPNGEWLASSSAD-K--LIKIWGAYDGKFEKTISGHKLGI-SDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLK 105 (231)
Q Consensus 30 i~~~~~~~~~~~l~~~~~d-g--~i~i~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~ 105 (231)
+..++|+|||++|+..... + .+.+|+..+++... +..+.... ..+.|+|+|+.|+.++.++.|++||+.+++...
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~-l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~ 116 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQ-LTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQV 116 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEE-CCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEE
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEE-eecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEE
Confidence 6788999999998766443 3 67788887765443 33322222 236899999999999988899999999877655
Q ss_pred eecCCCcceEE-------------------EEECCCCCEEEEe-----ecCCcEEEEECCCCceeeeccCCCCCeEEEEE
Q psy4391 106 TLKGHSNYVFC-------------------CNFNPQSNLIVSG-----SFDESVRIWDVRTGKCLKTLPAHSDPVSAVHF 161 (231)
Q Consensus 106 ~~~~~~~~v~~-------------------~~~~~~~~~l~~~-----~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~ 161 (231)
....+...... +.++|+++.++.. ..+..|.+||+.+++..... .+...+..+.|
T Consensus 117 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~ 195 (396)
T 3c5m_A 117 IYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH-QDTAWLGHPIY 195 (396)
T ss_dssp EEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE-EESSCEEEEEE
T ss_pred EEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec-cCCcccccceE
Confidence 44433332222 3467777766654 35567999999987754433 45567889999
Q ss_pred cC-CCCeEEEEecC------CeEEEEeCCCCceeeeeecCC-CCCeEEEEECCCCCEEEEEeCC-----CeEEEEeCC
Q psy4391 162 NR-DGSLIVSSSYD------GLCRIWDTASGQCLKTLIDDD-NPPVSFVKFSPNGKYILAATLD-----NTLKLWDSY 226 (231)
Q Consensus 162 ~~-~~~~l~~~~~d------g~i~v~d~~~~~~~~~~~~~~-~~~i~~~~~s~~g~~l~~~s~d-----~~v~vwd~~ 226 (231)
+| +++.++..+.+ ..|.+||+..++.. .+.... ...+..++|+|+|++|+.++.+ +.|.+||..
T Consensus 196 sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~ 272 (396)
T 3c5m_A 196 RPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVR-KIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPE 272 (396)
T ss_dssp ETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCE-ESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTT
T ss_pred CCCCCCEEEEEecCCCCCCCceEEEEECCCCcee-EeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECC
Confidence 99 78877765543 36888898765432 222221 2246778999999988877654 449999964
No 177
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.75 E-value=3.7e-16 Score=120.24 Aligned_cols=182 Identities=18% Similarity=0.201 Sum_probs=124.6
Q ss_pred cceEEEEECCCCCEEEEEeCC---C--cEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEecCC------------
Q psy4391 28 KAVSSVKFSPNGEWLASSSAD---K--LIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDD------------ 90 (231)
Q Consensus 28 ~~i~~~~~~~~~~~l~~~~~d---g--~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~------------ 90 (231)
..+..+.|+|||++|+..+.+ + .|.+|+..+++........ . +..++|+|+|+.|+.++.+
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~ 136 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDD 136 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcc
Confidence 457789999999998876543 3 3777787776654444333 3 8899999999998877632
Q ss_pred ---------------CcEEEEeCCCceeeeeecCCCcceEEEEECCCCCEEEEeecCC-------cEEEEECCCCceeee
Q psy4391 91 ---------------KTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE-------SVRIWDVRTGKCLKT 148 (231)
Q Consensus 91 ---------------g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-------~i~v~d~~~~~~~~~ 148 (231)
..|++||+.+++....+.. . .+..+.|+|+| +++++..++ ...+|.+.+++. ..
T Consensus 137 ~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~ 212 (347)
T 2gop_A 137 VPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKE-EK 212 (347)
T ss_dssp CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEE-EE
T ss_pred cceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCce-EE
Confidence 5789999988876344443 3 66788999999 777775542 334444334443 33
Q ss_pred ccCCCCCeEEEEEcCCCCeEEEEecC--------CeEEEEeCCCCceeeeeecCCCCCeEE-EEECCCCCEEEEEeCCCe
Q psy4391 149 LPAHSDPVSAVHFNRDGSLIVSSSYD--------GLCRIWDTASGQCLKTLIDDDNPPVSF-VKFSPNGKYILAATLDNT 219 (231)
Q Consensus 149 ~~~~~~~v~~~~~~~~~~~l~~~~~d--------g~i~v~d~~~~~~~~~~~~~~~~~i~~-~~~s~~g~~l~~~s~d~~ 219 (231)
+..+ ..+..+ +|+|+.|+.++.+ ..|.+|| +++. ..+.......+.. +.|+ +| ++++++.++.
T Consensus 213 l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~-~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~ 284 (347)
T 2gop_A 213 MFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEV-MGILDEVDRGVGQAKIKD-GK-VYFTLFEEGS 284 (347)
T ss_dssp EEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCE-EESSTTCCSEEEEEEEET-TE-EEEEEEETTE
T ss_pred eccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCce-EeccccCCcccCCccEEc-Cc-EEEEEecCCc
Confidence 3333 444444 9999998877644 4688888 4443 3333343455665 8899 88 8888899999
Q ss_pred EEEE
Q psy4391 220 LKLW 223 (231)
Q Consensus 220 v~vw 223 (231)
+++|
T Consensus 285 ~~l~ 288 (347)
T 2gop_A 285 VNLY 288 (347)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9999
No 178
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.74 E-value=2e-15 Score=112.13 Aligned_cols=197 Identities=8% Similarity=-0.036 Sum_probs=141.9
Q ss_pred cceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEe-cccccEEEEEECCCCCEEEEecCCCcEEEEeCCCceeeee
Q psy4391 28 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS-GHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKT 106 (231)
Q Consensus 28 ~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~ 106 (231)
..+.+++++++|+++++.. ++.|.+|+....... .+. .....+..++++++++.+++...++.|.+|+..+......
T Consensus 67 ~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~-~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~ 144 (270)
T 1rwi_B 67 YQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQT-VLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVL 144 (270)
T ss_dssp CSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCE-ECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEEC
T ss_pred CCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEe-eeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEee
Confidence 4677899999999666555 889999997654432 222 2235688999999998777777788999997655433222
Q ss_pred ecCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeEEEEecCCeEEEEeCCCCc
Q psy4391 107 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 186 (231)
Q Consensus 107 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~ 186 (231)
.......+..++++++++++++...++.|.+||............+...+..++++++|.++++...++.|.+||.....
T Consensus 145 ~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~ 224 (270)
T 1rwi_B 145 PFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTT 224 (270)
T ss_dssp CCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSC
T ss_pred ccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCc
Confidence 22222346678999999977777778899999988765443333333568899999999777777778899999987654
Q ss_pred eeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCC
Q psy4391 187 CLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSYP 227 (231)
Q Consensus 187 ~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~~~ 227 (231)
... ...........++++++|+.+++...+++|++|+...
T Consensus 225 ~~~-~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~ 264 (270)
T 1rwi_B 225 STV-LPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLE 264 (270)
T ss_dssp CEE-CCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCG
T ss_pred cee-eccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCC
Confidence 322 2222224568899999999888888899999999744
No 179
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.74 E-value=6.7e-16 Score=120.49 Aligned_cols=200 Identities=13% Similarity=0.039 Sum_probs=133.7
Q ss_pred ccccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEE--EECCCCCEEEEe---------------
Q psy4391 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV--AWSSDSRLLVSG--------------- 87 (231)
Q Consensus 25 ~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~~l~~~--------------- 87 (231)
++...+..+.|+|||+.|+.+..++.+++|+..+++.......+...+... .++|+++.++..
T Consensus 78 ~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~ 157 (388)
T 3pe7_A 78 GRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKK 157 (388)
T ss_dssp SSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHH
T ss_pred CCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccch
Confidence 344444467899999999999989999999999887666555444434333 348999988642
Q ss_pred -------cCCCcEEEEeCCCceeeeeecCCCcceEEEEECC-CCCEEEEeecC------CcEEEEECCCCceeeeccCCC
Q psy4391 88 -------SDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFD------ESVRIWDVRTGKCLKTLPAHS 153 (231)
Q Consensus 88 -------~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d------~~i~v~d~~~~~~~~~~~~~~ 153 (231)
..+..|.+||+.+++..... .+...+..+.|+| +|+.|+....+ ..|.++|+..+.. ..+..+.
T Consensus 158 ~~~~~~~~~~~~l~~~d~~~g~~~~l~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~ 235 (388)
T 3pe7_A 158 FHEFYFTKPCCRLMRVDLKTGESTVIL-QENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHA 235 (388)
T ss_dssp HHHHGGGCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCC
T ss_pred hhhhhccCCcceEEEEECCCCceEEee-cCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCC
Confidence 23467999999988654433 3455678899999 99988877653 3788888876543 3343333
Q ss_pred --CCeEEEEEcCCCCeEEEEec-CC----eEEEEeCCCCceeeeeecCCC----CCeEEEEECCCCCEEEEE--------
Q psy4391 154 --DPVSAVHFNRDGSLIVSSSY-DG----LCRIWDTASGQCLKTLIDDDN----PPVSFVKFSPNGKYILAA-------- 214 (231)
Q Consensus 154 --~~v~~~~~~~~~~~l~~~~~-dg----~i~v~d~~~~~~~~~~~~~~~----~~i~~~~~s~~g~~l~~~-------- 214 (231)
..+..++|+|||+.|+..+. ++ .|.+||+.+++.......... .....++|+|||+.|+..
T Consensus 236 ~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~ 315 (388)
T 3pe7_A 236 EGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYK 315 (388)
T ss_dssp TTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC-----------
T ss_pred CCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccc
Confidence 24778899999998865443 22 399999998874322111110 000113689999988864
Q ss_pred -eCCCeEEEEeCC
Q psy4391 215 -TLDNTLKLWDSY 226 (231)
Q Consensus 215 -s~d~~v~vwd~~ 226 (231)
..+..|.+||..
T Consensus 316 ~~~~~~i~~~d~~ 328 (388)
T 3pe7_A 316 IENDPFLYVFNMK 328 (388)
T ss_dssp -CCCCEEEEEETT
T ss_pred cCCCCEEEEEecc
Confidence 345689999964
No 180
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.73 E-value=7.7e-15 Score=110.62 Aligned_cols=193 Identities=15% Similarity=0.171 Sum_probs=134.9
Q ss_pred ccccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecc----cccEEEEEECCCCCEEEE----ec--------
Q psy4391 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH----KLGISDVAWSSDSRLLVS----GS-------- 88 (231)
Q Consensus 25 ~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~----~~-------- 88 (231)
.+...+.+++++++|+++++...++.|.+|+..+++........ ...+.+++++|+|+++++ +.
T Consensus 66 ~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~ 145 (296)
T 3e5z_A 66 HPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYG 145 (296)
T ss_dssp SSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSC
T ss_pred CCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCcccccccccccc
Confidence 45567899999999998877766789999998777654433221 123567899999998876 32
Q ss_pred -----CCCcEEEEeCCCceeeeeecCCCcceEEEEECCCCCEEEEeecCCcEEEEECC-CCce---eeeccCCCCCeEEE
Q psy4391 89 -----DDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR-TGKC---LKTLPAHSDPVSAV 159 (231)
Q Consensus 89 -----~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~-~~~~---~~~~~~~~~~v~~~ 159 (231)
..+.|..++.. ++. ..+..+......++|+|+++.+++.+.++.|.+||+. .++. ...+..+...+..+
T Consensus 146 ~~~~~~~~~l~~~~~~-g~~-~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i 223 (296)
T 3e5z_A 146 GEMELPGRWVFRLAPD-GTL-SAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGL 223 (296)
T ss_dssp CCCCSSSCEEEEECTT-SCE-EEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSE
T ss_pred ccccCCCcEEEEECCC-CCE-EEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeE
Confidence 13456666655 443 3333445567789999999988777778899999986 4443 22223344556789
Q ss_pred EEcCCCCeEEEEecCCeEEEEeCCCCceeeeeecCCCCCeEEEEE-CCCCCEEEEEeCCCeEEEEeC
Q psy4391 160 HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKF-SPNGKYILAATLDNTLKLWDS 225 (231)
Q Consensus 160 ~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~i~~~~~-s~~g~~l~~~s~d~~v~vwd~ 225 (231)
+++++|+++++. ++.|.+||.. ++.+..+..... +..++| +|+++.|++++.++ +..++.
T Consensus 224 ~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~~~~~~~--~~~~~f~~~d~~~L~v~t~~~-l~~~~~ 284 (296)
T 3e5z_A 224 RVDAGGLIWASA--GDGVHVLTPD-GDELGRVLTPQT--TSNLCFGGPEGRTLYMTVSTE-FWSIET 284 (296)
T ss_dssp EEBTTSCEEEEE--TTEEEEECTT-SCEEEEEECSSC--CCEEEEESTTSCEEEEEETTE-EEEEEC
T ss_pred EECCCCCEEEEc--CCeEEEECCC-CCEEEEEECCCC--ceeEEEECCCCCEEEEEcCCe-EEEEEc
Confidence 999999866655 8899999987 665655544433 677888 68999999988764 434443
No 181
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.72 E-value=6.9e-15 Score=109.19 Aligned_cols=196 Identities=10% Similarity=-0.031 Sum_probs=135.9
Q ss_pred ceEEEEECCCCCEEE-EEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEecCCCcEEEEeCCCceeeeee
Q psy4391 29 AVSSVKFSPNGEWLA-SSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTL 107 (231)
Q Consensus 29 ~i~~~~~~~~~~~l~-~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~ 107 (231)
...+++++++|++++ +...++.|.+|+..+.............+..++++++++.+++.. ++.|.+||..+.......
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~~ 103 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVLP 103 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCEECC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEeeee
Confidence 678999999999766 546778999998754432221122234577899999998666655 889999998765432221
Q ss_pred cCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeEEEEecCCeEEEEeCCCCce
Q psy4391 108 KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC 187 (231)
Q Consensus 108 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~ 187 (231)
......+..++++++++++++...++.|.+|+..+.............+..++++++++++++...++.|.+||......
T Consensus 104 ~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~ 183 (270)
T 1rwi_B 104 FDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQ 183 (270)
T ss_dssp CCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCE
T ss_pred cCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCce
Confidence 12235678899999999888777788999998665543322222233567899999999777777788999999887654
Q ss_pred eeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCC
Q psy4391 188 LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSY 226 (231)
Q Consensus 188 ~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~~ 226 (231)
..... ........++++++|..+++...++.|.+||..
T Consensus 184 ~~~~~-~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~ 221 (270)
T 1rwi_B 184 VVLPF-TDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAG 221 (270)
T ss_dssp EECCC-SSCCSEEEEEECTTCCEEEEETTTSCEEEECTT
T ss_pred Eeecc-cCCCCceEEEECCCCCEEEEECCCCcEEEEcCC
Confidence 33221 222456789999999777777678899999964
No 182
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.72 E-value=1.4e-13 Score=103.36 Aligned_cols=202 Identities=11% Similarity=0.081 Sum_probs=145.4
Q ss_pred EeecccccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEE-ecccccEEEEEECCCCCEEEEecCCCcEEEEeCC
Q psy4391 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELS 99 (231)
Q Consensus 21 ~~~~~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~ 99 (231)
+.+..+...+.+++++++|++.++...++.|.+|+.. +...... ......+..+++++++..+++...++.|..|+..
T Consensus 8 ~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~ 86 (299)
T 2z2n_A 8 LNLTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK 86 (299)
T ss_dssp EECCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred EcCCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC
Confidence 4455566789999999999977776667899999987 5443222 2234568899999999988877778889999986
Q ss_pred CceeeeeecCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeee-ccCCCCCeEEEEEcCCCCeEEEEecCCeEE
Q psy4391 100 SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKT-LPAHSDPVSAVHFNRDGSLIVSSSYDGLCR 178 (231)
Q Consensus 100 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 178 (231)
.......+......+..+.+++++.++++...++.|..||. +++.... .......+..+++++++.++++...++.|.
T Consensus 87 g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~ 165 (299)
T 2z2n_A 87 GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIG 165 (299)
T ss_dssp SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEE
T ss_pred CcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEE
Confidence 32211222223456788999999998888777889999998 5543322 223345688999999998877777778999
Q ss_pred EEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeC
Q psy4391 179 IWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225 (231)
Q Consensus 179 v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~ 225 (231)
.||. +++............+..++++++|+++++...++.|.+||.
T Consensus 166 ~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~ 211 (299)
T 2z2n_A 166 RITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT 211 (299)
T ss_dssp EECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT
T ss_pred EEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC
Confidence 9998 665443212223345678999999997777666889999986
No 183
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.71 E-value=4.2e-15 Score=111.09 Aligned_cols=183 Identities=16% Similarity=0.106 Sum_probs=143.0
Q ss_pred CCCCEEEEEeCCCcEEEeecCCCcEEEEEeccc-ccEEEEEECCCCCEEEEecCCCcEEEEeCCCceeeeeecCCC-cce
Q psy4391 37 PNGEWLASSSADKLIKIWGAYDGKFEKTISGHK-LGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHS-NYV 114 (231)
Q Consensus 37 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~-~~v 114 (231)
..++.|++++.++.|.+||.++++....+..+. ..+.++.++|+|+.++ +.++.|..||. +++.+..+.... ..+
T Consensus 3 ~~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~ 79 (276)
T 3no2_A 3 SPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEM 79 (276)
T ss_dssp CCCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEE
T ss_pred CCCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccc
Confidence 346788999999999999999999988887654 4678899999999887 34678999999 788887777542 467
Q ss_pred EEEEECCCCCEEEEeec-CCcEEEEECCCCceeeeccCC------CCCeEEEEEcCCCCeEEEEecCCeEEEEeCCCCce
Q psy4391 115 FCCNFNPQSNLIVSGSF-DESVRIWDVRTGKCLKTLPAH------SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC 187 (231)
Q Consensus 115 ~~~~~~~~~~~l~~~~~-d~~i~v~d~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~ 187 (231)
..+.+.++|+++++.+. ++.+..+|. .++.+..+... ......+++.++|.++++...++.|..||.. ++.
T Consensus 80 ~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~ 157 (276)
T 3no2_A 80 QTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQL 157 (276)
T ss_dssp EEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred cccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCE
Confidence 78889999999999887 778888886 56665554321 1233455788999999999999999999998 887
Q ss_pred eeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCC
Q psy4391 188 LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSY 226 (231)
Q Consensus 188 ~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~~ 226 (231)
+-++.... ....+...++|..+++++.+++|..+|..
T Consensus 158 ~w~~~~~~--~~~~~~~~~~g~~~v~~~~~~~v~~~d~~ 194 (276)
T 3no2_A 158 LNSVKLSG--TPFSSAFLDNGDCLVACGDAHCFVQLNLE 194 (276)
T ss_dssp EEEEECSS--CCCEEEECTTSCEEEECBTTSEEEEECTT
T ss_pred EEEEECCC--CccceeEcCCCCEEEEeCCCCeEEEEeCc
Confidence 76665432 23456778999999988888899998864
No 184
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.71 E-value=2.6e-13 Score=101.92 Aligned_cols=195 Identities=12% Similarity=0.085 Sum_probs=141.2
Q ss_pred cccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEe--cccccEEEEEECCCCCEEEEecCCCcEEEEeCCCcee
Q psy4391 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS--GHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKC 103 (231)
Q Consensus 26 h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~ 103 (231)
+...+.+++++++|.+.++...++.|..|+.. +.. ..+. .....+..+++.++++.+++...++.|..||. +++.
T Consensus 55 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~ 131 (299)
T 2z2n_A 55 PDAKVMCLTISSDGEVWFTENAANKIGRITKK-GII-KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKI 131 (299)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCE
T ss_pred ccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcE-EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCE
Confidence 44678899999999987776668889999875 332 2222 23456889999999988877777889999998 4443
Q ss_pred eee-ecCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeee-ccCCCCCeEEEEEcCCCCeEEEEecCCeEEEEe
Q psy4391 104 LKT-LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKT-LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181 (231)
Q Consensus 104 ~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d 181 (231)
... .......+..+.++++++++++...++.|..||. +++.... .......+..+++++++.++++...++.|.+||
T Consensus 132 ~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~ 210 (299)
T 2z2n_A 132 REYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRIT 210 (299)
T ss_dssp EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEEC
T ss_pred EEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEEC
Confidence 322 2223456788999999988887777789999998 5654332 233345688999999998777766788999999
Q ss_pred CCCCceeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeC
Q psy4391 182 TASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225 (231)
Q Consensus 182 ~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~ 225 (231)
. +++............+..++++++|+.+++...++.|.+||.
T Consensus 211 ~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 211 T-SGEITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTS 253 (299)
T ss_dssp T-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEET
T ss_pred C-CCcEEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEECC
Confidence 9 665433212223345788999999996666657789999986
No 185
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.71 E-value=8.1e-16 Score=129.04 Aligned_cols=196 Identities=13% Similarity=0.120 Sum_probs=133.6
Q ss_pred ccccceEEEEECCCCCEEEE-----EeCCCcEEEeecCCCcEEEEEecccccE--EEEEECCCCCEEEEecCCCc-----
Q psy4391 25 GHTKAVSSVKFSPNGEWLAS-----SSADKLIKIWGAYDGKFEKTISGHKLGI--SDVAWSSDSRLLVSGSDDKT----- 92 (231)
Q Consensus 25 ~h~~~i~~~~~~~~~~~l~~-----~~~dg~i~i~~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~l~~~~~~g~----- 92 (231)
+|...+..++|||||++||. |+.+..|++||+.+++... ..+...+ ..++|+|||+.|+.++.+..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~ 195 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKV 195 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCG
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC--CcccCcccccceEEecCCCEEEEEEecCCCCCcc
Confidence 35557899999999999883 3334689999998876531 1111122 57899999999998887665
Q ss_pred --------EEEEeCCCce----eeeeecCCCcceEEEEECCCCCEEEEeecCC----cEEEEECCCCceeeeccCCCCCe
Q psy4391 93 --------LKIWELSSGK----CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE----SVRIWDVRTGKCLKTLPAHSDPV 156 (231)
Q Consensus 93 --------i~~~d~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~----~i~v~d~~~~~~~~~~~~~~~~v 156 (231)
|++|++.+++ .+.....+...+..+.|+|+|++|+..+.++ .|+++|..+++ ...+..+...+
T Consensus 196 ~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~ 274 (695)
T 2bkl_A 196 DERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKD-FRLLVKGVGAK 274 (695)
T ss_dssp GGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSS-CEEEEECSSCC
T ss_pred ccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCc-eEEeecCCCce
Confidence 9999998765 2222223445678899999999998887665 67777765554 33444444455
Q ss_pred EEEEEcCCCCeEEEEe---cCCeEEEEeCCCCce--eeeeecCC-CCCeEEEEECCCCCEEEEEeCCCeEEEEeC
Q psy4391 157 SAVHFNRDGSLIVSSS---YDGLCRIWDTASGQC--LKTLIDDD-NPPVSFVKFSPNGKYILAATLDNTLKLWDS 225 (231)
Q Consensus 157 ~~~~~~~~~~~l~~~~---~dg~i~v~d~~~~~~--~~~~~~~~-~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~ 225 (231)
....+ +++.+++... .++.|.+||+.+++. ...+.... ...+..++++ ++.++++...|+..++|..
T Consensus 275 ~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~ 347 (695)
T 2bkl_A 275 YEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVA 347 (695)
T ss_dssp EEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEE
T ss_pred EEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEE
Confidence 55556 5666444443 257899999987652 23344333 4457778887 6778888888998888753
No 186
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.71 E-value=5.2e-16 Score=121.22 Aligned_cols=189 Identities=9% Similarity=0.013 Sum_probs=130.1
Q ss_pred EEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEE-------------------EEECCCCCEEEEe-----
Q psy4391 32 SVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISD-------------------VAWSSDSRLLVSG----- 87 (231)
Q Consensus 32 ~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~-------------------~~~~~~~~~l~~~----- 87 (231)
.+.|+|+|+.|+.++.++.+.+|+..+++.......+...... ..|+|+++.++..
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~ 164 (396)
T 3c5m_A 85 GGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHT 164 (396)
T ss_dssp TCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHT
T ss_pred cceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccC
Confidence 3789999999999888889999999877655444433221111 3467777766554
Q ss_pred cCCCcEEEEeCCCceeeeeecCCCcceEEEEECC-CCCEEEEeecC------CcEEEEECCCCceeeeccCC--CCCeEE
Q psy4391 88 SDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFD------ESVRIWDVRTGKCLKTLPAH--SDPVSA 158 (231)
Q Consensus 88 ~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d------~~i~v~d~~~~~~~~~~~~~--~~~v~~ 158 (231)
..+..|++||+.+++..... .+...+..+.|+| ++..|+..+.+ ..|.+||+..++. ..+..+ ...+..
T Consensus 165 ~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~ 242 (396)
T 3c5m_A 165 NPTCRLIKVDIETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNV-RKIKEHAEGESCTH 242 (396)
T ss_dssp CCCEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCC-EESSCCCTTEEEEE
T ss_pred CCcceEEEEECCCCcEEeec-cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCce-eEeeccCCCccccc
Confidence 35668999999887755444 3445677889999 78877766543 3688999876553 333222 224778
Q ss_pred EEEcCCCCeEEEEecC-----CeEEEEeCCCCceeeeeecCCCCCeEEEEECC-CCCEEEEEe----------------C
Q psy4391 159 VHFNRDGSLIVSSSYD-----GLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP-NGKYILAAT----------------L 216 (231)
Q Consensus 159 ~~~~~~~~~l~~~~~d-----g~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~-~g~~l~~~s----------------~ 216 (231)
++|+|+|+.|+.++.+ +.|.+||+.+++..... ... ... +.|+| +|+++++++ .
T Consensus 243 ~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~-~~~--~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~ 318 (396)
T 3c5m_A 243 EFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVM-VMP--PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIEN 318 (396)
T ss_dssp EEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEE-ECC--SEE-EEEECSSSSEEEEEECCC----------CCCC
T ss_pred eEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEee-eCC--CCC-CCccCCCCceEEEecCCcceeeccccccccCC
Confidence 8999999988776544 44999999887643322 111 233 78999 999888754 2
Q ss_pred CCeEEEEeCC
Q psy4391 217 DNTLKLWDSY 226 (231)
Q Consensus 217 d~~v~vwd~~ 226 (231)
++.|.+||..
T Consensus 319 ~~~i~~~d~~ 328 (396)
T 3c5m_A 319 DPFLYVLNTK 328 (396)
T ss_dssp CCEEEEEETT
T ss_pred CCcEEEEecc
Confidence 4689999863
No 187
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.70 E-value=3.7e-15 Score=114.10 Aligned_cols=194 Identities=9% Similarity=0.054 Sum_probs=140.3
Q ss_pred cceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEecCCCcEEEEeCCCceeeeee
Q psy4391 28 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTL 107 (231)
Q Consensus 28 ~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~ 107 (231)
..|.++.|++++..++....++.++.| .+.....+..+...+.+++|+++++.++++..++.|.+||.++++.....
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~ 82 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPF 82 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEE
T ss_pred cccceeeecCCccceeEEeecccCccc---ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEe
Confidence 346778889888877766778888888 34444555555566789999999997778888899999999887755444
Q ss_pred cCCCcceEEEEECCCCCEEEEeecC----CcEEEEECCCCceeeecc--CCCCCeEEEEEcCCCCeEEEEec------CC
Q psy4391 108 KGHSNYVFCCNFNPQSNLIVSGSFD----ESVRIWDVRTGKCLKTLP--AHSDPVSAVHFNRDGSLIVSSSY------DG 175 (231)
Q Consensus 108 ~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~v~d~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~------dg 175 (231)
..+...+..++++|+++++++...+ +.|.+||.+++.....+. .....+..++++|+++++++... .+
T Consensus 83 ~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~ 162 (333)
T 2dg1_A 83 VSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLG 162 (333)
T ss_dssp ECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCE
T ss_pred eCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCc
Confidence 3445678899999999988877666 689999998776432222 23457889999999987776653 35
Q ss_pred eEEEEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEE-eCCCeEEEEeCC
Q psy4391 176 LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAA-TLDNTLKLWDSY 226 (231)
Q Consensus 176 ~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~-s~d~~v~vwd~~ 226 (231)
.|..+|..+++... +.. .......++|+|+|++|+++ +.++.|.+||..
T Consensus 163 ~l~~~~~~~~~~~~-~~~-~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~ 212 (333)
T 2dg1_A 163 GVYYVSPDFRTVTP-IIQ-NISVANGIALSTDEKVLWVTETTANRLHRIALE 212 (333)
T ss_dssp EEEEECTTSCCEEE-EEE-EESSEEEEEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred eEEEEeCCCCEEEE-eec-CCCcccceEECCCCCEEEEEeCCCCeEEEEEec
Confidence 67777776554332 221 12245789999999866554 457899999863
No 188
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.68 E-value=2.6e-14 Score=109.44 Aligned_cols=195 Identities=10% Similarity=-0.013 Sum_probs=138.5
Q ss_pred ccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEeccc-----ccEEEEEECCCCCEEEEec--CCCcEEEEeCC
Q psy4391 27 TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK-----LGISDVAWSSDSRLLVSGS--DDKTLKIWELS 99 (231)
Q Consensus 27 ~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~~--~~g~i~~~d~~ 99 (231)
......++++++++..++...++.|.+||..+++....+.... .....+++ . +..++++. .++.|.++|.+
T Consensus 83 ~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~-~~~lyv~~~~~~~~v~viD~~ 160 (328)
T 3dsm_A 83 FTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-Y-GKYVYVNCWSYQNRILKIDTE 160 (328)
T ss_dssp CSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-E-TTEEEEEECTTCCEEEEEETT
T ss_pred CCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-E-CCEEEEEcCCCCCEEEEEECC
Confidence 3567789998888544444478999999999888776665332 13445666 3 44454444 48899999999
Q ss_pred CceeeeeecCCCcceEEEEECCCCCEEEEeecC----------CcEEEEECCCCceeeeccCC-CCCeEEEEEcCCCCeE
Q psy4391 100 SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD----------ESVRIWDVRTGKCLKTLPAH-SDPVSAVHFNRDGSLI 168 (231)
Q Consensus 100 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----------~~i~v~d~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l 168 (231)
+++....+.... ....+.++|+|+++++...+ +.|.++|..+++....+... ......++++|+++.+
T Consensus 161 t~~~~~~i~~g~-~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~l 239 (328)
T 3dsm_A 161 TDKVVDELTIGI-QPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTL 239 (328)
T ss_dssp TTEEEEEEECSS-CBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEE
T ss_pred CCeEEEEEEcCC-CccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEE
Confidence 988777766432 34567889999987777654 78999999988876665432 2367899999999988
Q ss_pred EEEecCCeEEEEeCCCCceeeee-ecCCCCCeEEEEECCC-CCEEEEE----eCCCeEEEEeCC
Q psy4391 169 VSSSYDGLCRIWDTASGQCLKTL-IDDDNPPVSFVKFSPN-GKYILAA----TLDNTLKLWDSY 226 (231)
Q Consensus 169 ~~~~~dg~i~v~d~~~~~~~~~~-~~~~~~~i~~~~~s~~-g~~l~~~----s~d~~v~vwd~~ 226 (231)
+++.. .|.+||+.+++..... ..........++++|+ +..+++. ..++.|.+||..
T Consensus 240 yv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 240 YWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp EEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred EEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence 88765 8999999887753221 1111234678999995 5555555 567899999964
No 189
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.68 E-value=2.3e-15 Score=116.75 Aligned_cols=174 Identities=10% Similarity=0.035 Sum_probs=128.9
Q ss_pred ceEEEEECCCCCEEEEEeCCCcEEEeecCCCc---------EEE-EEecccccEEEEEECCCCCEEEEecCCCcEEEEeC
Q psy4391 29 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGK---------FEK-TISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWEL 98 (231)
Q Consensus 29 ~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~---------~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~ 98 (231)
.+..+++++...++++|+.++ +.+|+..+.+ ... ....... |..++| +++.|+++ .++.|++||+
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv 113 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDL 113 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEES
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEc
Confidence 588999999999999999875 4558754322 111 1112344 999999 88999888 8899999998
Q ss_pred CCceeeeeecCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeEEEEecCCeEE
Q psy4391 99 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCR 178 (231)
Q Consensus 99 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 178 (231)
.+.........+...+.++.+.+. .+++++.||.|.+||+..+.... +...|++++|+|+| ++.|..||.++
T Consensus 114 ~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~~vg~~dg~i~ 185 (388)
T 1xip_A 114 EELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--LAVLLKDRSFQ 185 (388)
T ss_dssp SSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE--EEEEETTSCEE
T ss_pred hhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc--eEEEEcCCcEE
Confidence 765444344445555777666554 38888999999999999777543 34579999999999 67889999999
Q ss_pred EEeCCCCce--eeeee-----c---CCCCCeEEEEECCCCCEEEEEe
Q psy4391 179 IWDTASGQC--LKTLI-----D---DDNPPVSFVKFSPNGKYILAAT 215 (231)
Q Consensus 179 v~d~~~~~~--~~~~~-----~---~~~~~i~~~~~s~~g~~l~~~s 215 (231)
+|+...++. ..++. . .+...+.++.|.++++++++=+
T Consensus 186 ~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~ 232 (388)
T 1xip_A 186 SFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFG 232 (388)
T ss_dssp EEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEE
T ss_pred EEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEc
Confidence 998887764 34441 1 2456789999999999888744
No 190
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.67 E-value=1.7e-13 Score=102.41 Aligned_cols=190 Identities=17% Similarity=0.098 Sum_probs=142.5
Q ss_pred EEeecccc-cceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecc-cccEEEEEECCCCCEEEEecC-CCcEEEE
Q psy4391 20 KFTLAGHT-KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH-KLGISDVAWSSDSRLLVSGSD-DKTLKIW 96 (231)
Q Consensus 20 ~~~~~~h~-~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~-~g~i~~~ 96 (231)
..++..+. ..+.++.++|+|++++ +.++.|..||. +++....+..+ ...+..+.+.++|+.+++.+. ++.+..+
T Consensus 28 ~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~v 104 (276)
T 3no2_A 28 VWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEV 104 (276)
T ss_dssp EEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEE
T ss_pred EEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEE
Confidence 34444443 4678999999999888 34778999998 78888887754 246788899999999988877 7778777
Q ss_pred eCCCceeeeeecC------CCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeEEE
Q psy4391 97 ELSSGKCLKTLKG------HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVS 170 (231)
Q Consensus 97 d~~~~~~~~~~~~------~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 170 (231)
|. +++.+..+.. +......+...++|+++++...++.|..||.+ |+.+..+.... .+..+...+++.++++
T Consensus 105 d~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~~-~~~~~~~~~~g~~~v~ 181 (276)
T 3no2_A 105 NM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLSG-TPFSSAFLDNGDCLVA 181 (276)
T ss_dssp CT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECSS-CCCEEEECTTSCEEEE
T ss_pred eC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECCC-CccceeEcCCCCEEEE
Confidence 76 4555544431 11223345678999999999999999999998 88888876643 4556778899999998
Q ss_pred EecCCeEEEEeCCCCceeeeeecCC--C---CCeEEEEECCCCCEEEEEe
Q psy4391 171 SSYDGLCRIWDTASGQCLKTLIDDD--N---PPVSFVKFSPNGKYILAAT 215 (231)
Q Consensus 171 ~~~dg~i~v~d~~~~~~~~~~~~~~--~---~~i~~~~~s~~g~~l~~~s 215 (231)
+..++.|..+|..+++.+-++.... . ..+..++..++|..+++..
T Consensus 182 ~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 182 CGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp CBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred eCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 8888899999999898877665322 1 1256778889998887763
No 191
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.67 E-value=5.9e-14 Score=107.48 Aligned_cols=192 Identities=10% Similarity=-0.054 Sum_probs=138.1
Q ss_pred ceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEecCCCcEEEEeCCCceeeeeec
Q psy4391 29 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLK 108 (231)
Q Consensus 29 ~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~ 108 (231)
....+.+. ++++.++...++.|.+||..+++....+.. ......++++++++.+++...++.|.+||.++++....+.
T Consensus 45 ~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~~-~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~ 122 (328)
T 3dsm_A 45 VAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRITG-FTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIE 122 (328)
T ss_dssp CEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEEC-CSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEE
T ss_pred cceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcCC-CCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEE
Confidence 35667774 344455556678999999999988887753 3567889998988544444478999999999988776665
Q ss_pred CCC-----cceEEEEECCCCCEEEEee-cCCcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeEEEEecC--------
Q psy4391 109 GHS-----NYVFCCNFNPQSNLIVSGS-FDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD-------- 174 (231)
Q Consensus 109 ~~~-----~~v~~~~~~~~~~~l~~~~-~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-------- 174 (231)
... .....+++ .++.++++.. .++.|.++|+.+++.+..+.... ....++++|+|++++++..+
T Consensus 123 ~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~-~p~~i~~~~dG~l~v~~~~~~~~~~~~~ 200 (328)
T 3dsm_A 123 CPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGI-QPTSLVMDKYNKMWTITDGGYEGSPYGY 200 (328)
T ss_dssp CTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSS-CBCCCEECTTSEEEEEBCCBCTTCSSCB
T ss_pred cCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCC-CccceEEcCCCCEEEEECCCccCCcccc
Confidence 332 13345556 3444444433 48899999999998777766533 34678899999977776554
Q ss_pred --CeEEEEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCC
Q psy4391 175 --GLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSY 226 (231)
Q Consensus 175 --g~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~~ 226 (231)
+.|.++|..+++....+..........++++|++++|+++.. .|.+||..
T Consensus 201 ~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~ 252 (328)
T 3dsm_A 201 EAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVE 252 (328)
T ss_dssp CCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETT
T ss_pred CCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECC
Confidence 789999999988776654433334678999999999988764 89999963
No 192
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.66 E-value=4.2e-14 Score=119.47 Aligned_cols=195 Identities=15% Similarity=0.141 Sum_probs=131.0
Q ss_pred cccceEEEEECCCCCEEEEEeCC-----CcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEecCCCc--------
Q psy4391 26 HTKAVSSVKFSPNGEWLASSSAD-----KLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKT-------- 92 (231)
Q Consensus 26 h~~~i~~~~~~~~~~~l~~~~~d-----g~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~-------- 92 (231)
|...+..++|||||++|+.+..+ ..|++||+.+++...... +...+..++|+|| +.|+.+..++.
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~-~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~ 238 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADEL-KWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQA 238 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEE-EEEESCCCEESTT-SEEEEEECCCC--------
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccC-CCceeccEEEECC-CEEEEEEecCccccccccc
Confidence 33468899999999998875443 359999998887654321 2222356899999 98888776543
Q ss_pred ------EEEEeCCCcee--eeeecC--CCcceEEEEECCCCCEEEEeecCC-----cEEEEECCCC--ceeeeccCCCCC
Q psy4391 93 ------LKIWELSSGKC--LKTLKG--HSNYVFCCNFNPQSNLIVSGSFDE-----SVRIWDVRTG--KCLKTLPAHSDP 155 (231)
Q Consensus 93 ------i~~~d~~~~~~--~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~-----~i~v~d~~~~--~~~~~~~~~~~~ 155 (231)
|++|++.++.. ...+.. +...+..+.|+|+|++|+..+.++ .|++||+.++ +....+..+...
T Consensus 239 ~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~ 318 (741)
T 1yr2_A 239 LNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKA 318 (741)
T ss_dssp CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSS
T ss_pred CCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCc
Confidence 88999876542 222222 223577889999999988877544 7999999876 313444444444
Q ss_pred eEEEEEcCCCCeEEEEecC----CeEEEEeCCCC-ceeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEe
Q psy4391 156 VSAVHFNRDGSLIVSSSYD----GLCRIWDTASG-QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224 (231)
Q Consensus 156 v~~~~~~~~~~~l~~~~~d----g~i~v~d~~~~-~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd 224 (231)
.... ++|+++.|+..+.+ +.|.+||+.++ .....+.......+..+.++ ++.++++...|+..+||.
T Consensus 319 ~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~ 390 (741)
T 1yr2_A 319 QWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLA 390 (741)
T ss_dssp CEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEE
T ss_pred eEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEE
Confidence 4444 34889888877653 46999999875 23444444444446667777 566777788888777774
No 193
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.65 E-value=3.3e-13 Score=110.23 Aligned_cols=189 Identities=13% Similarity=0.068 Sum_probs=142.1
Q ss_pred CCCCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEecCCCcEEEEeCC--CceeeeeecCCCcce
Q psy4391 37 PNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELS--SGKCLKTLKGHSNYV 114 (231)
Q Consensus 37 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~--~~~~~~~~~~~~~~v 114 (231)
+.+.++++...++.|.++|..+++....+... ..+..+.++|||+++++++.++.|.+||+. +.+.+..+.... ..
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g-~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~-~P 242 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS-EA 242 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS-EE
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEeCC-CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC-CC
Confidence 33445566777899999999999888777643 356789999999999999999999999995 777777776543 35
Q ss_pred EEEEEC----CCCCEEEEeec-CCcEEEEECCCCceeeeccCC-----------CCCeEEEEEcCCCCeEE-EEecCCeE
Q psy4391 115 FCCNFN----PQSNLIVSGSF-DESVRIWDVRTGKCLKTLPAH-----------SDPVSAVHFNRDGSLIV-SSSYDGLC 177 (231)
Q Consensus 115 ~~~~~~----~~~~~l~~~~~-d~~i~v~d~~~~~~~~~~~~~-----------~~~v~~~~~~~~~~~l~-~~~~dg~i 177 (231)
..+.++ |+|+++++++. ++.+.++|..+.+.+..+... ...+..+..++++..++ ....+|.|
T Consensus 243 ~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v 322 (567)
T 1qks_A 243 RSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKI 322 (567)
T ss_dssp EEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEE
T ss_pred ceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeE
Confidence 688999 69998887765 588999999998877765432 12567888888766544 45566999
Q ss_pred EEEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEe-CCCeEEEEeCCC
Q psy4391 178 RIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT-LDNTLKLWDSYP 227 (231)
Q Consensus 178 ~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s-~d~~v~vwd~~~ 227 (231)
.++|....+.+.............+.|+|+|++++++. .++.|.++|...
T Consensus 323 ~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t 373 (567)
T 1qks_A 323 LLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKE 373 (567)
T ss_dssp EEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTT
T ss_pred EEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCC
Confidence 99998876543322222334456788999999987766 578999999754
No 194
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.65 E-value=4.1e-12 Score=95.37 Aligned_cols=197 Identities=13% Similarity=0.119 Sum_probs=139.7
Q ss_pred ccccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEE-EecccccEEEEEECCCCCEEEEecCCCcEEEEeCCCcee
Q psy4391 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT-ISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKC 103 (231)
Q Consensus 25 ~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~ 103 (231)
.+...+.++++.++|++.++...++.|..++.. ++.... .......+..+++.++++.+++...++.|..+|.+ ++.
T Consensus 59 ~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~ 136 (300)
T 2qc5_A 59 TPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTI 136 (300)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCE
T ss_pred CCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCE
Confidence 334678899999999977776667889999876 544322 22233568899999999888777778899999987 543
Q ss_pred ee-eecCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeee-ccCCCCCeEEEEEcCCCCeEEEEecCCeEEEEe
Q psy4391 104 LK-TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKT-LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181 (231)
Q Consensus 104 ~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d 181 (231)
.. .+......+..+.+++++++.++...++.|..+|. +++.... .......+..+++++++.++++....+.|.++|
T Consensus 137 ~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~ 215 (300)
T 2qc5_A 137 YEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRIT 215 (300)
T ss_dssp EEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEEC
T ss_pred EEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEc
Confidence 32 22323456788999999997777666788999998 4543322 223345688999999998777766678899999
Q ss_pred CCCCceeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeC
Q psy4391 182 TASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225 (231)
Q Consensus 182 ~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~ 225 (231)
. +++............+..++++++|+.+++...++.|..||.
T Consensus 216 ~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~ 258 (300)
T 2qc5_A 216 T-TGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITN 258 (300)
T ss_dssp T-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECT
T ss_pred C-CCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEECC
Confidence 8 444333222223345678999999986666656789999986
No 195
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.64 E-value=3.7e-12 Score=95.56 Aligned_cols=202 Identities=9% Similarity=0.094 Sum_probs=144.4
Q ss_pred EEeecccccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEE-EecccccEEEEEECCCCCEEEEecCCCcEEEEeC
Q psy4391 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT-ISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWEL 98 (231)
Q Consensus 20 ~~~~~~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~ 98 (231)
.+.+......+.++.+.++|++.++...++.|.+|+.. ++.... +......+..+++.++++.+++...++.|..+|.
T Consensus 12 ~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~ 90 (300)
T 2qc5_A 12 EFNLSIPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSK 90 (300)
T ss_dssp EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT
T ss_pred EEecCCCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECC
Confidence 34444455688999999999987776678999999987 544332 2223356889999999988777777888999998
Q ss_pred CCceeee-eecCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceee-eccCCCCCeEEEEEcCCCCeEEEEecCCe
Q psy4391 99 SSGKCLK-TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLK-TLPAHSDPVSAVHFNRDGSLIVSSSYDGL 176 (231)
Q Consensus 99 ~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 176 (231)
. ++... ........+..+.++++++++++...++.|..+|.. ++... .+......+..++++++++++++...++.
T Consensus 91 ~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~ 168 (300)
T 2qc5_A 91 K-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNS 168 (300)
T ss_dssp T-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTE
T ss_pred C-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCe
Confidence 7 44322 222233567889999999988877778899999987 55432 22323457889999999997766666789
Q ss_pred EEEEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeC
Q psy4391 177 CRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225 (231)
Q Consensus 177 i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~ 225 (231)
|..+|. +++...............++++++|.++++....+.|.+||.
T Consensus 169 i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~ 216 (300)
T 2qc5_A 169 IGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT 216 (300)
T ss_dssp EEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT
T ss_pred EEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC
Confidence 999998 555433222222345678999999987776666778999986
No 196
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.63 E-value=7.5e-14 Score=107.27 Aligned_cols=179 Identities=11% Similarity=0.139 Sum_probs=121.2
Q ss_pred eEEEEECCCCCEEEEEeC---------------------------CCcEEEeecCCCcEEEEEecccccEEEEEECCCCC
Q psy4391 30 VSSVKFSPNGEWLASSSA---------------------------DKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82 (231)
Q Consensus 30 i~~~~~~~~~~~l~~~~~---------------------------dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 82 (231)
+..+.|+|+|+.|+.++. ...|.+|+..+++....+.. . .+..+.|+|+|
T Consensus 106 ~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg- 182 (347)
T 2gop_A 106 IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK- 182 (347)
T ss_dssp EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-
T ss_pred ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-
Confidence 889999999998887653 25688899887766344544 3 77889999999
Q ss_pred EEEEecCCC-------cEEEEeCCCceeeeeecCCCcceEEEEECCCCCEEEEeecC--------CcEEEEECCCCceee
Q psy4391 83 LLVSGSDDK-------TLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD--------ESVRIWDVRTGKCLK 147 (231)
Q Consensus 83 ~l~~~~~~g-------~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------~~i~v~d~~~~~~~~ 147 (231)
.++++..++ ...+|.+.+++.. .+..+ ..+.. ++|+|+.|+..+.+ ..|.+|| +++...
T Consensus 183 ~~~~~~~~~~~~~~~~~~~l~~~d~~~~~-~l~~~-~~~~~--~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~ 256 (347)
T 2gop_A 183 IVVNVPHREIIPQYFKFWDIYIWEDGKEE-KMFEK-VSFYA--VDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMG 256 (347)
T ss_dssp EEEEEECCCSSCCSSCCEEEEEEETTEEE-EEEEE-ESEEE--EEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEE
T ss_pred EEEEEecccccccccccccEEEeCCCceE-EeccC-cceee--ECCCCCEEEEEEccccCCccccceEEEEC--CCceEe
Confidence 776665432 3344433355433 33323 33443 38999988877644 3688888 555444
Q ss_pred eccCCCCCeEE-EEEcCCCCeEEEEecCCeEEEEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeE-EEEe
Q psy4391 148 TLPAHSDPVSA-VHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTL-KLWD 224 (231)
Q Consensus 148 ~~~~~~~~v~~-~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v-~vwd 224 (231)
....+...+.. +.|+ ++ ++++++.++.+++| +.+++. ..+... ...+..++|+| .++++++.++.. ++|.
T Consensus 257 l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~-~~~~~~-~~~v~~~~~s~--~~~~~~~~~~~~~~l~~ 328 (347)
T 2gop_A 257 ILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEI-KPIAKG-RHWIMGFDVDE--IVVYLKETATRLRELFT 328 (347)
T ss_dssp SSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSE-EEEECS-SSEEEEEEESS--SEEEEEECSSSCCEEEE
T ss_pred ccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCce-EEEecC-CCeEEeeeeeC--cEEEEEcCCCChHHheE
Confidence 44455567775 8999 88 88899999999999 775554 333333 55688899999 677777766654 6664
No 197
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.61 E-value=2.8e-13 Score=113.97 Aligned_cols=195 Identities=12% Similarity=0.002 Sum_probs=134.5
Q ss_pred eEEEEECCCCCEEEEEeCCCc----------------EEEeecCCCcE--EEEEec--ccccEEEEEECCCCCEEEEecC
Q psy4391 30 VSSVKFSPNGEWLASSSADKL----------------IKIWGAYDGKF--EKTISG--HKLGISDVAWSSDSRLLVSGSD 89 (231)
Q Consensus 30 i~~~~~~~~~~~l~~~~~dg~----------------i~i~~~~~~~~--~~~~~~--~~~~v~~~~~~~~~~~l~~~~~ 89 (231)
+..++|+|||+.|+.+..++. |++|++.++.. ...... +...+..+.|+|||++|+..+.
T Consensus 173 ~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~ 252 (710)
T 2xdw_A 173 FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIR 252 (710)
T ss_dssp SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEE
T ss_pred cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEE
Confidence 567999999999988877765 99999877652 222232 2344778999999999887654
Q ss_pred -----CCcEEEEeCCC------ce-eeeeecCCCcceEEEEECCCCCEEEEeecC----CcEEEEECCCCce--eeeccC
Q psy4391 90 -----DKTLKIWELSS------GK-CLKTLKGHSNYVFCCNFNPQSNLIVSGSFD----ESVRIWDVRTGKC--LKTLPA 151 (231)
Q Consensus 90 -----~g~i~~~d~~~------~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~v~d~~~~~~--~~~~~~ 151 (231)
+..|++||+.+ +. ....+..+...... .|+|+|..|+..+.. +.|.+||+.++.. ...+..
T Consensus 253 ~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~ 331 (710)
T 2xdw_A 253 EGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVP 331 (710)
T ss_dssp CSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEEC
T ss_pred ccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccC
Confidence 56899999976 42 24445444444433 478888887766553 3599999987641 233334
Q ss_pred CCC--CeEEEEEcCCCCeEEEEecCCe--EEEEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEe----CCCeEEEE
Q psy4391 152 HSD--PVSAVHFNRDGSLIVSSSYDGL--CRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT----LDNTLKLW 223 (231)
Q Consensus 152 ~~~--~v~~~~~~~~~~~l~~~~~dg~--i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s----~d~~v~vw 223 (231)
+.. .+..+.|++++.++++...++. |.+||+.+++.+..+... ...+..+.++|+++.++... ..+.|..|
T Consensus 332 ~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~-~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~ 410 (710)
T 2xdw_A 332 EHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLE-VGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHC 410 (710)
T ss_dssp CCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCC-SSEEEEEECCTTCSEEEEEEECSSCCCEEEEE
T ss_pred CCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCC-CceEEEEecCCCCCEEEEEEeCCCCCCEEEEE
Confidence 433 5778899877778888888884 666788677665555433 44577788999997666442 24689999
Q ss_pred eCC
Q psy4391 224 DSY 226 (231)
Q Consensus 224 d~~ 226 (231)
|..
T Consensus 411 d~~ 413 (710)
T 2xdw_A 411 DLT 413 (710)
T ss_dssp ETT
T ss_pred ECC
Confidence 864
No 198
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.61 E-value=2.6e-12 Score=100.00 Aligned_cols=189 Identities=11% Similarity=0.006 Sum_probs=123.2
Q ss_pred EEEECCCCCEEEEEe----------CCCcEEEeecCCCcEEEEEecc-------cccEEEEEECCCCCEEEEecC--CCc
Q psy4391 32 SVKFSPNGEWLASSS----------ADKLIKIWGAYDGKFEKTISGH-------KLGISDVAWSSDSRLLVSGSD--DKT 92 (231)
Q Consensus 32 ~~~~~~~~~~l~~~~----------~dg~i~i~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~--~g~ 92 (231)
.++++|||++++.+. .++.|.+||..+.+....+... ......++|+|||++++++.. ++.
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~ 149 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPA 149 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCe
Confidence 899999999998875 3678999999887776665432 123457899999999988764 478
Q ss_pred EEEEeCCCceeeee-ecCCCcceEEEEECCCC-CEEEEeec---------------------------------------
Q psy4391 93 LKIWELSSGKCLKT-LKGHSNYVFCCNFNPQS-NLIVSGSF--------------------------------------- 131 (231)
Q Consensus 93 i~~~d~~~~~~~~~-~~~~~~~v~~~~~~~~~-~~l~~~~~--------------------------------------- 131 (231)
|.++| ++++.+.. +..... +.+.|++ +.+++.+.
T Consensus 150 v~viD-~t~~~~~~~i~~~~~----~~~~~~~~~~~~~~~~dg~~~~vd~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 224 (373)
T 2mad_H 150 VGLVV-QGGSSDDQLLSSPTC----YHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKS 224 (373)
T ss_pred EEEEE-CCCCEEeEEcCCCce----EEEEeCCCceEEEEcCCCCEEEEECCCcEEEEEeccccccCCcceeecceeEecC
Confidence 99999 98887766 543211 1111211 11222222
Q ss_pred --------CCcEEEEECCCCc--eeeeccC----------CCCCeEEEEEcCCCCeEEEEec----------CCeEEEEe
Q psy4391 132 --------DESVRIWDVRTGK--CLKTLPA----------HSDPVSAVHFNRDGSLIVSSSY----------DGLCRIWD 181 (231)
Q Consensus 132 --------d~~i~v~d~~~~~--~~~~~~~----------~~~~v~~~~~~~~~~~l~~~~~----------dg~i~v~d 181 (231)
.+.+.+.|+..+. .+..+.. .......+.++|+++.+++... ++.|.++|
T Consensus 225 ~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID 304 (373)
T 2mad_H 225 GRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVT 304 (373)
T ss_pred CEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEE
Confidence 3344444443221 1111100 0112334778999888777643 35799999
Q ss_pred CCCCceeeeeecCCCCCeEEEEECCCCC-EEEEEe-CCCeEEEEeCCC
Q psy4391 182 TASGQCLKTLIDDDNPPVSFVKFSPNGK-YILAAT-LDNTLKLWDSYP 227 (231)
Q Consensus 182 ~~~~~~~~~~~~~~~~~i~~~~~s~~g~-~l~~~s-~d~~v~vwd~~~ 227 (231)
+.+++.+.++.... ....++|+|||+ .++++. .++.|.+||...
T Consensus 305 ~~t~~vv~~i~~g~--~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t 350 (373)
T 2mad_H 305 GLVGQTSSQISLGH--DVDAISVAQDGGPDLYALSAGTEVLHIYDAGA 350 (373)
T ss_pred CCCCEEEEEEECCC--CcCeEEECCCCCeEEEEEcCCCCeEEEEECCC
Confidence 99999888875433 346799999999 777776 489999999743
No 199
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.60 E-value=1.4e-12 Score=102.82 Aligned_cols=194 Identities=12% Similarity=0.060 Sum_probs=132.7
Q ss_pred cceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEecCCC--cEEEEeCCCceeee
Q psy4391 28 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDK--TLKIWELSSGKCLK 105 (231)
Q Consensus 28 ~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g--~i~~~d~~~~~~~~ 105 (231)
.....++|+++++++++...++.|++|+..++........... .. ++|+++++.++++..++ .|.+++...+....
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~-~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~ 208 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKG-GK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPT 208 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCB-CB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCC-Cc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeE
Confidence 3577999999999777777778999999977766554444322 33 89999999888887765 78888876544333
Q ss_pred ee----cCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeee----ccCCCCCe-E-EEEEcCC-CCeEEEEecC
Q psy4391 106 TL----KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKT----LPAHSDPV-S-AVHFNRD-GSLIVSSSYD 174 (231)
Q Consensus 106 ~~----~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~----~~~~~~~v-~-~~~~~~~-~~~l~~~~~d 174 (231)
.+ ......+..++++|++..|+.+..++.|+.||..++..... .......- . .++|+|+ +.++++-..+
T Consensus 209 ~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~ 288 (409)
T 3hrp_A 209 RIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNL 288 (409)
T ss_dssp EEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTT
T ss_pred EeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCC
Confidence 33 21334566789999555555577788999999987653222 11111222 2 8999995 5556666677
Q ss_pred CeEEEEeCCCCceeeeeecCC--------------CCCeEEEEECCCCCEEEEEe-CCCeEEEEeC
Q psy4391 175 GLCRIWDTASGQCLKTLIDDD--------------NPPVSFVKFSPNGKYILAAT-LDNTLKLWDS 225 (231)
Q Consensus 175 g~i~v~d~~~~~~~~~~~~~~--------------~~~i~~~~~s~~g~~l~~~s-~d~~v~vwd~ 225 (231)
+.|..|+.... ...+.... -.....++++|+|+++++-+ .+++|+.||.
T Consensus 289 ~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~ 352 (409)
T 3hrp_A 289 SSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDI 352 (409)
T ss_dssp TEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEET
T ss_pred CEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEEC
Confidence 89999987643 22222211 12356799999999777777 7889999993
No 200
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.58 E-value=9.3e-12 Score=101.69 Aligned_cols=196 Identities=13% Similarity=0.077 Sum_probs=140.4
Q ss_pred ceEEEEECCCCCEEEEEeCCCcEEEeecC--CCcEEEEEecccccEEEEEEC----CCCCEEEEecC-CCcEEEEeCCCc
Q psy4391 29 AVSSVKFSPNGEWLASSSADKLIKIWGAY--DGKFEKTISGHKLGISDVAWS----SDSRLLVSGSD-DKTLKIWELSSG 101 (231)
Q Consensus 29 ~i~~~~~~~~~~~l~~~~~dg~i~i~~~~--~~~~~~~~~~~~~~v~~~~~~----~~~~~l~~~~~-~g~i~~~d~~~~ 101 (231)
.+..+.|+|||+++++++.++.|.+||.. +.+....+.... ....++|+ |+|+++++++. ++.+.++|..+.
T Consensus 198 ~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~-~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~ 276 (567)
T 1qks_A 198 AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS-EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETL 276 (567)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS-EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTC
T ss_pred CccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC-CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCC
Confidence 46689999999999999999999999995 777777766433 46789999 69998877655 589999999998
Q ss_pred eeeeeecCC-----------CcceEEEEECCCCCEE-EEeecCCcEEEEECCCCceee--eccCCCCCeEEEEEcCCCCe
Q psy4391 102 KCLKTLKGH-----------SNYVFCCNFNPQSNLI-VSGSFDESVRIWDVRTGKCLK--TLPAHSDPVSAVHFNRDGSL 167 (231)
Q Consensus 102 ~~~~~~~~~-----------~~~v~~~~~~~~~~~l-~~~~~d~~i~v~d~~~~~~~~--~~~~~~~~v~~~~~~~~~~~ 167 (231)
+.+..+... ...+..+..++++..+ +.....|.|.++|....+.+. .+.. ......+.|+|++++
T Consensus 277 ~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~-~~~~~d~~~~pdgr~ 355 (567)
T 1qks_A 277 EPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISA-ERFLHDGGLDGSHRY 355 (567)
T ss_dssp CEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEEC-CSSEEEEEECTTSCE
T ss_pred cEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeec-cccccCceECCCCCE
Confidence 877766432 1246677788876554 444567899999987654222 2222 335667899999999
Q ss_pred EEEEe-cCCeEEEEeCCCCceeeeeec-CCCC---CeEEEEECCCCCEEE-EEe-CCCeEEEEeCCC
Q psy4391 168 IVSSS-YDGLCRIWDTASGQCLKTLID-DDNP---PVSFVKFSPNGKYIL-AAT-LDNTLKLWDSYP 227 (231)
Q Consensus 168 l~~~~-~dg~i~v~d~~~~~~~~~~~~-~~~~---~i~~~~~s~~g~~l~-~~s-~d~~v~vwd~~~ 227 (231)
++++. .++.|.++|+.+++....+.. ...+ .... .++|++..+. ++. .++.|.++|+.|
T Consensus 356 ~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~-~~~p~~g~v~~t~~~g~~~Vsvid~~~ 421 (567)
T 1qks_A 356 FITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGAN-FVHPTFGPVWATSHMGDDSVALIGTDP 421 (567)
T ss_dssp EEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEE-EEETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred EEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCcccee-eECCCCCcEEEeCCCCCCeEEEecCCC
Confidence 87665 568999999999987766644 2211 1112 2688855444 443 358999999865
No 201
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.57 E-value=3e-12 Score=96.93 Aligned_cols=195 Identities=12% Similarity=0.194 Sum_probs=132.8
Q ss_pred cccceEEEEECCC-CCEEEEEeCCCcEEEeecCCCcEEEE-Eec----ccccEEEEEECCCCCEEEEecCC---------
Q psy4391 26 HTKAVSSVKFSPN-GEWLASSSADKLIKIWGAYDGKFEKT-ISG----HKLGISDVAWSSDSRLLVSGSDD--------- 90 (231)
Q Consensus 26 h~~~i~~~~~~~~-~~~l~~~~~dg~i~i~~~~~~~~~~~-~~~----~~~~v~~~~~~~~~~~l~~~~~~--------- 90 (231)
+...+.+++++++ |+++++. ..+.|.+|+.. ++.... ... ....+.+++++++|+.+++...+
T Consensus 69 ~~~~~~~i~~~~~~g~l~v~~-~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~ 146 (314)
T 1pjx_A 69 YGGIPAGCQCDRDANQLFVAD-MRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTR 146 (314)
T ss_dssp EECCEEEEEECSSSSEEEEEE-TTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCB
T ss_pred CCCCCceEEEecCCCcEEEEE-CCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccc
Confidence 4567889999999 6655544 44578889987 554332 211 12347889999999877776554
Q ss_pred ------CcEEEEeCCCceeeeeecCCCcceEEEEEC----CCCCEEEEe-ecCCcEEEEECC-CCc-----eeeeccCCC
Q psy4391 91 ------KTLKIWELSSGKCLKTLKGHSNYVFCCNFN----PQSNLIVSG-SFDESVRIWDVR-TGK-----CLKTLPAHS 153 (231)
Q Consensus 91 ------g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~----~~~~~l~~~-~~d~~i~v~d~~-~~~-----~~~~~~~~~ 153 (231)
+.|..|+.. ++...... .......++++ |+++.++.+ ..++.|.+||+. .++ ....+..+.
T Consensus 147 ~~~~~~~~l~~~~~~-g~~~~~~~-~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~ 224 (314)
T 1pjx_A 147 SMQEKFGSIYCFTTD-GQMIQVDT-AFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTH 224 (314)
T ss_dssp TTSSSCEEEEEECTT-SCEEEEEE-EESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCS
T ss_pred cccCCCCeEEEECCC-CCEEEecc-CCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCC
Confidence 567777765 44332222 22345678889 998765554 567899999986 443 222333333
Q ss_pred -CCeEEEEEcCCCCeEEEEecCCeEEEEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEe-CCCeEEEEeC
Q psy4391 154 -DPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT-LDNTLKLWDS 225 (231)
Q Consensus 154 -~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s-~d~~v~vwd~ 225 (231)
..+..++++++|.++++...++.|.+||..+++....+... ...+..++++|+|+.|++++ .++.|..|+.
T Consensus 225 ~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~-~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~ 297 (314)
T 1pjx_A 225 EGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCP-FEKPSNLHFKPQTKTIFVTEHENNAVWKFEW 297 (314)
T ss_dssp SCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECS-SSCEEEEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred CCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCC-CCCceeEEECCCCCEEEEEeCCCCeEEEEeC
Confidence 55788999999998888777899999999877655554332 34578899999999665554 5679999985
No 202
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.56 E-value=6.2e-12 Score=94.85 Aligned_cols=186 Identities=15% Similarity=0.128 Sum_probs=125.4
Q ss_pred ccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEec----ccccEEEEEECCCCCEEEEecCC---------CcE
Q psy4391 27 TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG----HKLGISDVAWSSDSRLLVSGSDD---------KTL 93 (231)
Q Consensus 27 ~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~~---------g~i 93 (231)
...+.+++++++|+++++ . ++.|.+|+..+++....... ....+.+++++|+|+++++.... ..-
T Consensus 53 ~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~ 130 (297)
T 3g4e_A 53 DAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQG 130 (297)
T ss_dssp SSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCE
T ss_pred CCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCc
Confidence 457889999999996554 3 56789999877765433321 12357889999999976654321 223
Q ss_pred EEEeCCC-ceeeeeecCCCcceEEEEECCCCCEEEE-eecCCcEEEEEC--CCCce-----eeeccCCCCCeEEEEEcCC
Q psy4391 94 KIWELSS-GKCLKTLKGHSNYVFCCNFNPQSNLIVS-GSFDESVRIWDV--RTGKC-----LKTLPAHSDPVSAVHFNRD 164 (231)
Q Consensus 94 ~~~d~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d~~i~v~d~--~~~~~-----~~~~~~~~~~v~~~~~~~~ 164 (231)
.+|.+.. ++... +.........++|+|+++.++. .+.++.|.+||+ .++.. ...+....+.+..++++++
T Consensus 131 ~l~~~d~~g~~~~-~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~ 209 (297)
T 3g4e_A 131 ALYSLFPDHHVKK-YFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAE 209 (297)
T ss_dssp EEEEECTTSCEEE-EEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTT
T ss_pred EEEEEECCCCEEE-EeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCC
Confidence 4444432 33222 2222334568899999987654 456788999987 44532 1222223356788999999
Q ss_pred CCeEEEEecCCeEEEEeCCCCceeeeeecCCCCCeEEEEEC-CCCCEEEEEeC
Q psy4391 165 GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS-PNGKYILAATL 216 (231)
Q Consensus 165 ~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s-~~g~~l~~~s~ 216 (231)
|.+.++...++.|..||..+++.+..+... ...+.+++|. |+++.|++++.
T Consensus 210 G~lwva~~~~~~v~~~d~~tG~~~~~i~~p-~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 210 GKLWVACYNGGRVIRLDPVTGKRLQTVKLP-VDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp SCEEEEEETTTEEEEECTTTCCEEEEEECS-SSBEEEEEEESGGGCEEEEEEB
T ss_pred CCEEEEEcCCCEEEEEcCCCceEEEEEECC-CCCceEEEEeCCCCCEEEEEcC
Confidence 988777777889999999988877766543 3457889998 89887776664
No 203
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.56 E-value=2.8e-13 Score=105.03 Aligned_cols=184 Identities=14% Similarity=0.145 Sum_probs=130.7
Q ss_pred CCCEEEEEe------CCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEec----------CCCcEEEEeCCCc
Q psy4391 38 NGEWLASSS------ADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGS----------DDKTLKIWELSSG 101 (231)
Q Consensus 38 ~~~~l~~~~------~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~~g~i~~~d~~~~ 101 (231)
+++++++.. .|+.|.+||..+++....+..+..+ .++|+|++++++++. .++.|.+||..+.
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~ 91 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKL 91 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTC
T ss_pred CCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCC
Confidence 566666543 3679999999888888777765544 899999999998876 2567999999988
Q ss_pred eeeeeecCC------CcceEEEEECCCCCEEEEeec--CCcEEEEECCCCceeee-ccCCCCCeEEEEEcCCC-CeEEEE
Q psy4391 102 KCLKTLKGH------SNYVFCCNFNPQSNLIVSGSF--DESVRIWDVRTGKCLKT-LPAHSDPVSAVHFNRDG-SLIVSS 171 (231)
Q Consensus 102 ~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~--d~~i~v~d~~~~~~~~~-~~~~~~~v~~~~~~~~~-~~l~~~ 171 (231)
+.+..+... ......+.++|+|++++++.. ++.|.+||+.+++.+.. +... ....+.+.|++ ..+++.
T Consensus 92 ~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~--~~~~v~~~p~~~~~~~~~ 169 (361)
T 2oiz_A 92 TFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAA--GCWSVIPQPNRPRSFMTI 169 (361)
T ss_dssp CEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGT--TEEEEEECTTSSSEEEEE
T ss_pred cEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCC--CcceeEEcCCCCeeEEEE
Confidence 877666432 123456889999999998874 57899999999988777 5532 22335667765 567788
Q ss_pred ecCCeEEEEeCCC-Cceeeee-----ecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCC
Q psy4391 172 SYDGLCRIWDTAS-GQCLKTL-----IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSY 226 (231)
Q Consensus 172 ~~dg~i~v~d~~~-~~~~~~~-----~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~~ 226 (231)
+.||.+.++++.. ++..... ......++ .+.+++++..++..+.++.|.++|..
T Consensus 170 ~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~ 229 (361)
T 2oiz_A 170 CGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPI-FIAPALDKDKAHFVSYYGNVYSADFS 229 (361)
T ss_dssp ETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCB-CSCCEECSSEEEEEBTTSEEEEEECS
T ss_pred CCCCcEEEEEECCCCcEeeeccccceEcCCCCce-EEEecccCCEEEEEeCCCeEEEEEec
Confidence 8899999998765 4433111 11112222 23346777778888888999999863
No 204
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.53 E-value=1.1e-11 Score=93.67 Aligned_cols=196 Identities=12% Similarity=0.113 Sum_probs=132.7
Q ss_pred ccceEEEEECCCCCEEEE-------EeCCCcEEEeecCCCcEEEEEe----cccccEEEEEECCC-CCEEEEecCCCcEE
Q psy4391 27 TKAVSSVKFSPNGEWLAS-------SSADKLIKIWGAYDGKFEKTIS----GHKLGISDVAWSSD-SRLLVSGSDDKTLK 94 (231)
Q Consensus 27 ~~~i~~~~~~~~~~~l~~-------~~~dg~i~i~~~~~~~~~~~~~----~~~~~v~~~~~~~~-~~~l~~~~~~g~i~ 94 (231)
-....+++|+++|.++++ +..++.|.+|+..+++...... ++...+..++++++ ++.+++.. .+.|.
T Consensus 17 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~-~~~l~ 95 (314)
T 1pjx_A 17 IPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM-RLGLL 95 (314)
T ss_dssp CTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET-TTEEE
T ss_pred CCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC-CCCEE
Confidence 345689999999988777 5678899999977776543222 13456889999999 76555544 44788
Q ss_pred EEeCCCceeeee-ecC----CCcceEEEEECCCCCEEEEeecC---------------CcEEEEECCCCceeeeccCCCC
Q psy4391 95 IWELSSGKCLKT-LKG----HSNYVFCCNFNPQSNLIVSGSFD---------------ESVRIWDVRTGKCLKTLPAHSD 154 (231)
Q Consensus 95 ~~d~~~~~~~~~-~~~----~~~~v~~~~~~~~~~~l~~~~~d---------------~~i~v~d~~~~~~~~~~~~~~~ 154 (231)
+||.+ ++.... ... ....+..+.++++|+++++...+ +.|..||.. ++... +..+..
T Consensus 96 ~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~-~~~~~~ 172 (314)
T 1pjx_A 96 VVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQ-VDTAFQ 172 (314)
T ss_dssp EEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEE-EEEEES
T ss_pred EEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEE-eccCCC
Confidence 99988 654333 221 12346789999999988877655 567778766 44322 222234
Q ss_pred CeEEEEEc----CCCCeEEEE-ecCCeEEEEeCC-CCcee--eeeec--CCC-CCeEEEEECCCCCEEEEEeCCCeEEEE
Q psy4391 155 PVSAVHFN----RDGSLIVSS-SYDGLCRIWDTA-SGQCL--KTLID--DDN-PPVSFVKFSPNGKYILAATLDNTLKLW 223 (231)
Q Consensus 155 ~v~~~~~~----~~~~~l~~~-~~dg~i~v~d~~-~~~~~--~~~~~--~~~-~~i~~~~~s~~g~~l~~~s~d~~v~vw 223 (231)
....++++ |+++.++.+ ..++.|.+||+. +++.. ..+.. ... .....++++++|+++++...++.|.+|
T Consensus 173 ~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~ 252 (314)
T 1pjx_A 173 FPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVF 252 (314)
T ss_dssp SEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEE
T ss_pred CcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEE
Confidence 56788999 999766554 567899999976 34321 11111 111 345779999999988887788999999
Q ss_pred eCC
Q psy4391 224 DSY 226 (231)
Q Consensus 224 d~~ 226 (231)
|..
T Consensus 253 d~~ 255 (314)
T 1pjx_A 253 GPD 255 (314)
T ss_dssp CTT
T ss_pred cCC
Confidence 965
No 205
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.52 E-value=2.1e-12 Score=108.38 Aligned_cols=195 Identities=16% Similarity=0.184 Sum_probs=128.1
Q ss_pred ccccceEEEEECCCCCEEEEEe-----CCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEecCCC--------
Q psy4391 25 GHTKAVSSVKFSPNGEWLASSS-----ADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDK-------- 91 (231)
Q Consensus 25 ~h~~~i~~~~~~~~~~~l~~~~-----~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g-------- 91 (231)
+|...+..+.|||||++||.+. ....|++||+.+++...... .......++|+ |++.|+.+..+.
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~-~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~ 203 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPL-KDVKFSGISWL-GNEGFFYSSYDKPDGSELSA 203 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEE-EEEESCCCEEE-TTTEEEEEESSCCC------
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcccc-CCceeccEEEe-CCCEEEEEEecCcccccccc
Confidence 3555788999999999887432 23479999999887654311 11113467899 999998887663
Q ss_pred -----cEEEEeCCCcee--eeeecC---CCcceEEEEECCCCCEEEEeec----CCcEEEEECCCCc-eeeeccCCCCCe
Q psy4391 92 -----TLKIWELSSGKC--LKTLKG---HSNYVFCCNFNPQSNLIVSGSF----DESVRIWDVRTGK-CLKTLPAHSDPV 156 (231)
Q Consensus 92 -----~i~~~d~~~~~~--~~~~~~---~~~~v~~~~~~~~~~~l~~~~~----d~~i~v~d~~~~~-~~~~~~~~~~~v 156 (231)
.|++|++.+... ...... +......+.++|+|++|+.... ...++++|+.++. ....+..+....
T Consensus 204 ~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~ 283 (693)
T 3iuj_A 204 RTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDAD 283 (693)
T ss_dssp -CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSC
T ss_pred cCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCce
Confidence 399999876542 222222 2334678899999998865443 2479999998764 344444455555
Q ss_pred EEEEEcCCCCeEEEE-ecC---CeEEEEeCCCCce--eeeeecCCCCCeEEEEECCCCCEEEEEeCCC---eEEEEeC
Q psy4391 157 SAVHFNRDGSLIVSS-SYD---GLCRIWDTASGQC--LKTLIDDDNPPVSFVKFSPNGKYILAATLDN---TLKLWDS 225 (231)
Q Consensus 157 ~~~~~~~~~~~l~~~-~~d---g~i~v~d~~~~~~--~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~---~v~vwd~ 225 (231)
... +++++..|+.. ..+ +.|..+|+.++.. ...+..+... +. .|++++++|+....++ .|.+||.
T Consensus 284 ~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~-~~--~~s~~g~~lv~~~~~~g~~~l~~~d~ 357 (693)
T 3iuj_A 284 VSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQ-VL--TVHSGSGYLFAEYMVDATARVEQFDY 357 (693)
T ss_dssp EEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSS-CE--EEEEETTEEEEEEEETTEEEEEEECT
T ss_pred EEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCC-EE--EEEEECCEEEEEEEECCeeEEEEEEC
Confidence 444 56666655544 333 6799999987653 2344433333 32 7899999888777644 7888875
No 206
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.52 E-value=5.4e-11 Score=89.67 Aligned_cols=196 Identities=10% Similarity=0.091 Sum_probs=128.4
Q ss_pred ccccceEEEEECCCCC-EEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEecCCCcEEEEeCCCcee
Q psy4391 25 GHTKAVSSVKFSPNGE-WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKC 103 (231)
Q Consensus 25 ~h~~~i~~~~~~~~~~-~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~ 103 (231)
.+..-..+..|++++. ++++...++.|..|+..++... .+. ....+..++++++++++++. ++.|.+||.++++.
T Consensus 10 ~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~~~~i~~~~dG~l~v~~--~~~l~~~d~~~g~~ 85 (297)
T 3g4e_A 10 ENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ-RVT-MDAPVSSVALRQSGGYVATI--GTKFCALNWKEQSA 85 (297)
T ss_dssp CCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE-EEE-CSSCEEEEEEBTTSSEEEEE--TTEEEEEETTTTEE
T ss_pred cCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEE-EEe-CCCceEEEEECCCCCEEEEE--CCeEEEEECCCCcE
Confidence 3344556899999655 5566667889999998776542 232 34568899999999955543 56799999987764
Q ss_pred eeeecC----CCcceEEEEECCCCCEEEEeecC-----------CcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeE
Q psy4391 104 LKTLKG----HSNYVFCCNFNPQSNLIVSGSFD-----------ESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLI 168 (231)
Q Consensus 104 ~~~~~~----~~~~v~~~~~~~~~~~l~~~~~d-----------~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 168 (231)
...... ....+..+.++|+|+++++.... +.|..+|.. ++. ..+.........++|+|+++.+
T Consensus 86 ~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~-~~~~~~~~~pngi~~spdg~~l 163 (297)
T 3g4e_A 86 VVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHV-KKYFDQVDISNGLDWSLDHKIF 163 (297)
T ss_dssp EEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCE-EEEEEEESBEEEEEECTTSCEE
T ss_pred EEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCE-EEEeeccccccceEEcCCCCEE
Confidence 433221 12457789999999977755322 234444443 322 2222223356789999999876
Q ss_pred E-EEecCCeEEEEeC--CCCcee--eeeec--CCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCC
Q psy4391 169 V-SSSYDGLCRIWDT--ASGQCL--KTLID--DDNPPVSFVKFSPNGKYILAATLDNTLKLWDSY 226 (231)
Q Consensus 169 ~-~~~~dg~i~v~d~--~~~~~~--~~~~~--~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~~ 226 (231)
+ +.+.++.|.+||+ .++... +.+.. ........++++++|.+.++...++.|.+||..
T Consensus 164 yv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~ 228 (297)
T 3g4e_A 164 YYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPV 228 (297)
T ss_dssp EEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTT
T ss_pred EEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCC
Confidence 5 4556789999986 455432 11211 112345678999999887777778899999974
No 207
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.51 E-value=8.7e-13 Score=110.70 Aligned_cols=193 Identities=10% Similarity=-0.043 Sum_probs=126.4
Q ss_pred EEEEECCCCCEEEEEeCCCc-------------EEEeecCCCcE--EEEEe--cccccEEEEEECCCCCEEEEecCCC--
Q psy4391 31 SSVKFSPNGEWLASSSADKL-------------IKIWGAYDGKF--EKTIS--GHKLGISDVAWSSDSRLLVSGSDDK-- 91 (231)
Q Consensus 31 ~~~~~~~~~~~l~~~~~dg~-------------i~i~~~~~~~~--~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~g-- 91 (231)
..++|+|||+.|+.++.+.. |++|++.++.. ..... .+...+..+.|+|||++|+..+.++
T Consensus 171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~ 250 (695)
T 2bkl_A 171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWS 250 (695)
T ss_dssp CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTT
T ss_pred cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCC
Confidence 67899999999998887765 99999877652 22222 2335678899999999998777665
Q ss_pred --cEEEEeCCCceeeeeecCCCcceEEEEECCCCCEEEEee---cCCcEEEEECCCCce---eeeccCC-CCCeEEEEEc
Q psy4391 92 --TLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS---FDESVRIWDVRTGKC---LKTLPAH-SDPVSAVHFN 162 (231)
Q Consensus 92 --~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~d~~i~v~d~~~~~~---~~~~~~~-~~~v~~~~~~ 162 (231)
.|++++..+++.. .+..+........+ +++.+++... .++.|.+||+.++.. ...+..+ ...+..++++
T Consensus 251 ~~~l~~~~~~~~~~~-~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~ 328 (695)
T 2bkl_A 251 ENDVYWKRPGEKDFR-LLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV 328 (695)
T ss_dssp EEEEEEECTTCSSCE-EEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE
T ss_pred ceEEEEEcCCCCceE-EeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE
Confidence 6777776655433 33333334444445 5666444443 257899999987652 2223222 3457778888
Q ss_pred CCCCeEEEEecCCeEEEEeCC-CCceeeeeecCCCCCeEEEEECCCCCEEEEEe----CCCeEEEEeCC
Q psy4391 163 RDGSLIVSSSYDGLCRIWDTA-SGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT----LDNTLKLWDSY 226 (231)
Q Consensus 163 ~~~~~l~~~~~dg~i~v~d~~-~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s----~d~~v~vwd~~ 226 (231)
++.++++...|+..++|.+. .++....+.......+..++++|+++.++... ..+.|.+||..
T Consensus 329 -~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~ 396 (695)
T 2bkl_A 329 -GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVS 396 (695)
T ss_dssp -TTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETT
T ss_pred -CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECC
Confidence 67778888889887777443 34444444333344456678899998776433 24688899863
No 208
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.51 E-value=8.7e-12 Score=94.37 Aligned_cols=193 Identities=11% Similarity=0.043 Sum_probs=127.2
Q ss_pred cccceEEEEECCCCC-EEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEecCCCcEEEEeCCCceee
Q psy4391 26 HTKAVSSVKFSPNGE-WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCL 104 (231)
Q Consensus 26 h~~~i~~~~~~~~~~-~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~ 104 (231)
.........|+++|+ ++++...++.|..|+. ++. ...+......+..++++++|+.+++...++.|.+|+.+ ++..
T Consensus 43 ~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~ 119 (305)
T 3dr2_A 43 QATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAH 119 (305)
T ss_dssp CCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE
T ss_pred CCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEE
Confidence 344567899999999 5667777889999987 444 33444445668899999999977766667889999986 4432
Q ss_pred eeec---CC-CcceEEEEECCCCCEEEE----eec-------------CCcEEEEECCCCceeeeccCCCCCeEEEEEcC
Q psy4391 105 KTLK---GH-SNYVFCCNFNPQSNLIVS----GSF-------------DESVRIWDVRTGKCLKTLPAHSDPVSAVHFNR 163 (231)
Q Consensus 105 ~~~~---~~-~~~v~~~~~~~~~~~l~~----~~~-------------d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~ 163 (231)
.... .. ...+..+.++++|+++++ |.. .+.|..+|..+++..... .......++|+|
T Consensus 120 ~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~sp 197 (305)
T 3dr2_A 120 LLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSP 197 (305)
T ss_dssp EEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEECT
T ss_pred EEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEEcC
Confidence 2211 10 123456889999998886 332 246788887666543332 334567899999
Q ss_pred CCCeEEEEecC------CeEEEEeCCCCcee--eeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeC
Q psy4391 164 DGSLIVSSSYD------GLCRIWDTASGQCL--KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225 (231)
Q Consensus 164 ~~~~l~~~~~d------g~i~v~d~~~~~~~--~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~ 225 (231)
|++.|+.+... +.|.+|++...... ..+..........++++++|++. +++. +.|.+||.
T Consensus 198 dg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lw-v~~~-~gv~~~~~ 265 (305)
T 3dr2_A 198 DEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLW-SSSG-TGVCVFDS 265 (305)
T ss_dssp TSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEE-ECCS-SEEEEECT
T ss_pred CCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEE-EecC-CcEEEECC
Confidence 99988777655 68999998754311 11111111223457889999844 4444 45888886
No 209
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.49 E-value=2.6e-11 Score=95.50 Aligned_cols=190 Identities=13% Similarity=0.066 Sum_probs=129.7
Q ss_pred EEECCCCCEEEEEeCCC--cEEEeecCCCcEEEEE----ecccccEEEEEECCCCCEEEEecCCCcEEEEeCCCceeeee
Q psy4391 33 VKFSPNGEWLASSSADK--LIKIWGAYDGKFEKTI----SGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKT 106 (231)
Q Consensus 33 ~~~~~~~~~l~~~~~dg--~i~i~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~ 106 (231)
++|+++++.|+++..++ .|.+++...+.....+ ......+..++++|++..|+.+..++.|+.||..++.....
T Consensus 176 ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~ 255 (409)
T 3hrp_A 176 PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLI 255 (409)
T ss_dssp CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEE
T ss_pred eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEE
Confidence 88999999888887765 7888887655443333 21334577889999555566677788999999987653222
Q ss_pred ----ecCCCcce-E-EEEECCC-CCEEEEeecCCcEEEEECCCCceeeeccCC---------------CCCeEEEEEcCC
Q psy4391 107 ----LKGHSNYV-F-CCNFNPQ-SNLIVSGSFDESVRIWDVRTGKCLKTLPAH---------------SDPVSAVHFNRD 164 (231)
Q Consensus 107 ----~~~~~~~v-~-~~~~~~~-~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~---------------~~~v~~~~~~~~ 164 (231)
........ . .++++|+ +.++++-..++.|+.|+.... +..+..+ -.....++++|+
T Consensus 256 ~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~d 333 (409)
T 3hrp_A 256 KQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDED 333 (409)
T ss_dssp EECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTT
T ss_pred ecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCC
Confidence 11111111 2 7899995 566666667888999997643 2222111 134788999999
Q ss_pred CCeEEEEe-cCCeEEEEeCCCCceeeeeecCC--------------CCCeEEEEECCCCCEEEEEeCCCeEEEEeC
Q psy4391 165 GSLIVSSS-YDGLCRIWDTASGQCLKTLIDDD--------------NPPVSFVKFSPNGKYILAATLDNTLKLWDS 225 (231)
Q Consensus 165 ~~~l~~~~-~dg~i~v~d~~~~~~~~~~~~~~--------------~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~ 225 (231)
|+++++-. .++.|+.||+.+++.. .+.... -.....++++++|.++++-..+++|+.++.
T Consensus 334 G~lyvad~~~~~~I~~~~~~~G~v~-~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 334 GNFYIVDGFKGYCLRKLDILDGYVS-TVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp CCEEEEETTTTCEEEEEETTTTEEE-EEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred CCEEEEeCCCCCEEEEEECCCCEEE-EEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 99777777 7899999998777643 332210 123577999999988888888889988763
No 210
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.48 E-value=2.5e-12 Score=99.80 Aligned_cols=133 Identities=12% Similarity=0.064 Sum_probs=107.0
Q ss_pred cccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEecCCCcEEEEeCCCceeee
Q psy4391 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLK 105 (231)
Q Consensus 26 h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~ 105 (231)
+.. |+.++| ++++|+++ .++.|++||+.+.........+..++.++.+.+. .++++..||.|.+||++++....
T Consensus 87 lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~ 160 (388)
T 1xip_A 87 IPD-VIFVCF--HGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ 160 (388)
T ss_dssp CTT-EEEEEE--ETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE
T ss_pred CCC-eeEEEE--CCCEEEEE-cCCcEEEEEchhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc
Confidence 455 999999 99999998 7899999998776665566666677888777654 38888999999999999776543
Q ss_pred eecCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCce--eeec------c---CCCCCeEEEEEcCCCCeEEE
Q psy4391 106 TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC--LKTL------P---AHSDPVSAVHFNRDGSLIVS 170 (231)
Q Consensus 106 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~--~~~~------~---~~~~~v~~~~~~~~~~~l~~ 170 (231)
....+.+++|+|+| ++.|..||.+++|+...+.. ...+ . .|...|.++.|.+++.++++
T Consensus 161 ----~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 161 ----LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp ----EEESEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred ----ccCCceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 23579999999999 67899999999999887764 3344 2 35678999999999988876
No 211
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.48 E-value=4.8e-12 Score=99.46 Aligned_cols=194 Identities=10% Similarity=0.074 Sum_probs=127.6
Q ss_pred EEEECCCCCEEEEEe----------CCCcEEEeecCCCcEEEEEecc-------cccEEEEEECCCCCEEEEecC--CCc
Q psy4391 32 SVKFSPNGEWLASSS----------ADKLIKIWGAYDGKFEKTISGH-------KLGISDVAWSSDSRLLVSGSD--DKT 92 (231)
Q Consensus 32 ~~~~~~~~~~l~~~~----------~dg~i~i~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~--~g~ 92 (231)
.++++|||++++.+. .++.|.++|..+.+....+.-. ......+.++|||++++++.. ++.
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~ 201 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPA 201 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCE
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCe
Confidence 899999999887765 3678999999998887776421 123456799999999988764 578
Q ss_pred EEEEeCCCceeeeeecCCCc-------ceEEEEECCCCC-------------------------------------EEEE
Q psy4391 93 LKIWELSSGKCLKTLKGHSN-------YVFCCNFNPQSN-------------------------------------LIVS 128 (231)
Q Consensus 93 i~~~d~~~~~~~~~~~~~~~-------~v~~~~~~~~~~-------------------------------------~l~~ 128 (231)
|.+.|+.+.+.+..+..... ....+.++++|+ .++.
T Consensus 202 VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~ 281 (426)
T 3c75_H 202 VGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVW 281 (426)
T ss_dssp EEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEE
T ss_pred EEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEE
Confidence 99999999887766653211 000122333333 3333
Q ss_pred eecCCcEEEEECCCCcee--eeccC----------CCCCeEEEEEcCCCCeEEEEec----------CCeEEEEeCCCCc
Q psy4391 129 GSFDESVRIWDVRTGKCL--KTLPA----------HSDPVSAVHFNRDGSLIVSSSY----------DGLCRIWDTASGQ 186 (231)
Q Consensus 129 ~~~d~~i~v~d~~~~~~~--~~~~~----------~~~~v~~~~~~~~~~~l~~~~~----------dg~i~v~d~~~~~ 186 (231)
....+.+.+.|+..+... ..+.. .......++++|+++.+++... ++.|.++|+.+.+
T Consensus 282 ~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~k 361 (426)
T 3c75_H 282 PTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGE 361 (426)
T ss_dssp EBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCC
T ss_pred EeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCe
Confidence 333445555555432210 00000 0011123688999887776642 3579999999999
Q ss_pred eeeeeecCCCCCeEEEEECCCCC-EEEEEe-CCCeEEEEeCCC
Q psy4391 187 CLKTLIDDDNPPVSFVKFSPNGK-YILAAT-LDNTLKLWDSYP 227 (231)
Q Consensus 187 ~~~~~~~~~~~~i~~~~~s~~g~-~l~~~s-~d~~v~vwd~~~ 227 (231)
.+.++.... ....++|+|||+ ++++.. .++.|.|+|...
T Consensus 362 vv~~I~vg~--~P~gia~spDg~~~lyv~n~~s~~VsVID~~t 402 (426)
T 3c75_H 362 RINKIELGH--EIDSINVSQDAEPLLYALSAGTQTLHIYDAAT 402 (426)
T ss_dssp EEEEEEEEE--EECEEEECCSSSCEEEEEETTTTEEEEEETTT
T ss_pred EEEEEECCC--CcCeEEEccCCCEEEEEEcCCCCeEEEEECCC
Confidence 888875443 246789999999 888887 489999999743
No 212
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.47 E-value=1.5e-10 Score=85.11 Aligned_cols=205 Identities=10% Similarity=0.032 Sum_probs=139.8
Q ss_pred cceeEEeeccccc--ceEEEEECCCCCEEEEEeC--CCcEEEeecCCCcEEEEEeccc-ccEEEEEECCCCCEEEEecCC
Q psy4391 16 NYVLKFTLAGHTK--AVSSVKFSPNGEWLASSSA--DKLIKIWGAYDGKFEKTISGHK-LGISDVAWSSDSRLLVSGSDD 90 (231)
Q Consensus 16 ~~~~~~~~~~h~~--~i~~~~~~~~~~~l~~~~~--dg~i~i~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~~ 90 (231)
.+.+..++ .|.. ....+.|++++.+.++.+. ++.|+++|..+++....+.-.. .....+++.. ++..++.-.+
T Consensus 8 ~~~vv~~~-p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g-~~lyv~t~~~ 85 (266)
T 2iwa_A 8 IVEVLNEF-PHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLN-EKLYQVVWLK 85 (266)
T ss_dssp EEEEEEEE-ECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEET-TEEEEEETTC
T ss_pred CceEEEEE-ECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeC-CEEEEEEecC
Confidence 34444444 3443 3579999998755454443 5799999999999888765222 1223455542 2344555568
Q ss_pred CcEEEEeCCCceeeeeecCC-CcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeeccCCCC-----CeEEEEEcCC
Q psy4391 91 KTLKIWELSSGKCLKTLKGH-SNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSD-----PVSAVHFNRD 164 (231)
Q Consensus 91 g~i~~~d~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~-----~v~~~~~~~~ 164 (231)
+.+.++|.++.+.+..+... ... ..++++++.++.+..++.|.++|..+.+.+..+..... .+..+.|. +
T Consensus 86 ~~v~viD~~t~~v~~~i~~g~~~g---~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-d 161 (266)
T 2iwa_A 86 NIGFIYDRRTLSNIKNFTHQMKDG---WGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-N 161 (266)
T ss_dssp SEEEEEETTTTEEEEEEECCSSSC---CEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-T
T ss_pred CEEEEEECCCCcEEEEEECCCCCe---EEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-C
Confidence 89999999999888887643 222 23556777777777788999999999887777664321 35677887 6
Q ss_pred CCeEEEEecCCeEEEEeCCCCceeeeeecC------------CCCCeEEEEECCCCCEEEEEe-CCCeEEEEeCC
Q psy4391 165 GSLIVSSSYDGLCRIWDTASGQCLKTLIDD------------DNPPVSFVKFSPNGKYILAAT-LDNTLKLWDSY 226 (231)
Q Consensus 165 ~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~------------~~~~i~~~~~s~~g~~l~~~s-~d~~v~vwd~~ 226 (231)
+..++....++.|.+.|+.+++.+..+... .....+.++++|+++.+++++ ..+++.+.+..
T Consensus 162 g~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~ 236 (266)
T 2iwa_A 162 GEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLH 236 (266)
T ss_dssp TEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEE
T ss_pred CEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEe
Confidence 765555556789999999999988777432 112457899999987665544 56788877753
No 213
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.47 E-value=1.9e-14 Score=111.93 Aligned_cols=179 Identities=15% Similarity=0.044 Sum_probs=101.0
Q ss_pred CCCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEecCCCcEEEEeCCCceeeeeecCCCcc-eE-
Q psy4391 38 NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNY-VF- 115 (231)
Q Consensus 38 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~-v~- 115 (231)
++..+++++.||.|+.||..+++....+.. ..+.+..+..++..+++++.|+.|+.||.++++.+..+..+... +.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence 577889999999999999999988877765 34444445567777888889999999999888765555432111 10
Q ss_pred EEEECCCCCEEEEeecCCcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeEEEEecCCeEEEEeCCCCceeeeeecCC
Q psy4391 116 CCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD 195 (231)
Q Consensus 116 ~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~ 195 (231)
...+. .+..+++++.++.++.||.++|+.+..+..+. ...++|++..+++++.++.+..||..+++.+-.+....
T Consensus 86 sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~ 160 (369)
T 2hz6_A 86 SPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFD 160 (369)
T ss_dssp CSCC------CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCCSSSSSCCCEEEEEE
T ss_pred CceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEeccc
Confidence 00111 34567788889999999999999877766543 23456788889999999999999999987654432111
Q ss_pred CCCeEEEEECCCC---CEEEEEeCCCeEEEEeCC
Q psy4391 196 NPPVSFVKFSPNG---KYILAATLDNTLKLWDSY 226 (231)
Q Consensus 196 ~~~i~~~~~s~~g---~~l~~~s~d~~v~vwd~~ 226 (231)
....+++++. ..+++++.||.|..||..
T Consensus 161 ---~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~ 191 (369)
T 2hz6_A 161 ---YAASLPEDDVDYKMSHFVSNGDGLVVTVDSE 191 (369)
T ss_dssp ---ECCBCCCCCTTCCCCEEEEETSCEEEEECTT
T ss_pred ---ccCccccCCccccceEEEECCCCEEEEEECC
Confidence 1112334432 457778889999999964
No 214
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.47 E-value=3.5e-11 Score=91.03 Aligned_cols=189 Identities=12% Similarity=0.090 Sum_probs=124.5
Q ss_pred cccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecc----cccEEEEEECCCCCEEEE----ecC--------
Q psy4391 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH----KLGISDVAWSSDSRLLVS----GSD-------- 89 (231)
Q Consensus 26 h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~----~~~-------- 89 (231)
+...+..++++++|+++++...++.|.+|+.. ++........ ...+.+++++++|+.+++ +..
T Consensus 84 ~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~ 162 (305)
T 3dr2_A 84 ATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPA 162 (305)
T ss_dssp SCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCC
T ss_pred CCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCcccccccccc
Confidence 45568899999999977665556789999875 5433222111 123567899999998776 332
Q ss_pred -----CCcEEEEeCCCceeeeeecCCCcceEEEEECCCCCEEEEeecC------CcEEEEECCCCcee--eec-cCCCCC
Q psy4391 90 -----DKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD------ESVRIWDVRTGKCL--KTL-PAHSDP 155 (231)
Q Consensus 90 -----~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~v~d~~~~~~~--~~~-~~~~~~ 155 (231)
.+.|..+|.++++..... .......++|+|+++.|+.+... +.|.+||+..+... ..+ ....+.
T Consensus 163 ~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~ 240 (305)
T 3dr2_A 163 DPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGL 240 (305)
T ss_dssp CCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSC
T ss_pred ccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCC
Confidence 246777887666543332 23445678999999988777665 68999998754311 111 112334
Q ss_pred eEEEEEcCCCCeEEEEecCCeEEEEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEE
Q psy4391 156 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 222 (231)
Q Consensus 156 v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~v 222 (231)
...++++++|++.+ ++.+ .|.+|+.. ++.+..+.... .+..++|+++++.|++++.++-.++
T Consensus 241 pdgi~~d~~G~lwv-~~~~-gv~~~~~~-g~~~~~~~~~~--~~~~~~f~~d~~~L~it~~~~l~~~ 302 (305)
T 3dr2_A 241 PDGFCVDRGGWLWS-SSGT-GVCVFDSD-GQLLGHIPTPG--TASNCTFDQAQQRLFITGGPCLWML 302 (305)
T ss_dssp CCSEEECTTSCEEE-CCSS-EEEEECTT-SCEEEEEECSS--CCCEEEECTTSCEEEEEETTEEEEE
T ss_pred CCeEEECCCCCEEE-ecCC-cEEEECCC-CCEEEEEECCC--ceeEEEEeCCCCEEEEEcCCeEEEE
Confidence 55688999999544 4444 49999984 55555554433 3677899999999988887654443
No 215
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.45 E-value=2.4e-10 Score=87.30 Aligned_cols=184 Identities=13% Similarity=0.068 Sum_probs=122.4
Q ss_pred ccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEec----ccccEEEEEECCCCCEEEEecC------CCcEEEE
Q psy4391 27 TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG----HKLGISDVAWSSDSRLLVSGSD------DKTLKIW 96 (231)
Q Consensus 27 ~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~------~g~i~~~ 96 (231)
...+.+++|+++|+++++. .+ .|.+|+..+++....... ....+.+++++|+|+++++... .+.|..+
T Consensus 89 ~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~ 166 (326)
T 2ghs_A 89 PFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHV 166 (326)
T ss_dssp SSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEE
T ss_pred CCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEE
Confidence 3568899999999877764 34 488999877765433221 1235789999999987665432 2456666
Q ss_pred eCCCceeeeeecCCCcceEEEEECCCCCEEEEe-ecCCcEEEEECC--CC-ce-----eeeccCCCCCeEEEEEcCCCCe
Q psy4391 97 ELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG-SFDESVRIWDVR--TG-KC-----LKTLPAHSDPVSAVHFNRDGSL 167 (231)
Q Consensus 97 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~v~d~~--~~-~~-----~~~~~~~~~~v~~~~~~~~~~~ 167 (231)
+ +++... +.........++|+|+++.++.+ ..++.|.+||+. ++ .. ...+......+..++++++|.+
T Consensus 167 ~--~g~~~~-~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~l 243 (326)
T 2ghs_A 167 A--KGKVTK-LFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHI 243 (326)
T ss_dssp E--TTEEEE-EEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCE
T ss_pred e--CCcEEE-eeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCE
Confidence 6 444332 22222345678999999876555 456889999986 55 31 2222223345678999999987
Q ss_pred EEEEecCCeEEEEeCCCCceeeeeecCCCCCeEEEEEC-CCCCEEEEEeCC
Q psy4391 168 IVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS-PNGKYILAATLD 217 (231)
Q Consensus 168 l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s-~~g~~l~~~s~d 217 (231)
+++...++.|..||. +++.+..+.. ....+.+++|+ ++++.|++++..
T Consensus 244 wva~~~~~~v~~~d~-~g~~~~~i~~-~~~~~~~~af~g~d~~~L~vt~~~ 292 (326)
T 2ghs_A 244 WNARWGEGAVDRYDT-DGNHIARYEV-PGKQTTCPAFIGPDASRLLVTSAR 292 (326)
T ss_dssp EEEEETTTEEEEECT-TCCEEEEEEC-SCSBEEEEEEESTTSCEEEEEEBC
T ss_pred EEEEeCCCEEEEECC-CCCEEEEEEC-CCCCcEEEEEecCCCCEEEEEecC
Confidence 777666789999998 5665555443 33457889998 898877666543
No 216
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.44 E-value=1.1e-11 Score=104.86 Aligned_cols=192 Identities=14% Similarity=0.067 Sum_probs=124.6
Q ss_pred EEEEECCCCCEEEEEeCCCc--------------EEEeecCCCcE--EEEEec--ccccEEEEEECCCCCEEEEecCCC-
Q psy4391 31 SSVKFSPNGEWLASSSADKL--------------IKIWGAYDGKF--EKTISG--HKLGISDVAWSSDSRLLVSGSDDK- 91 (231)
Q Consensus 31 ~~~~~~~~~~~l~~~~~dg~--------------i~i~~~~~~~~--~~~~~~--~~~~v~~~~~~~~~~~l~~~~~~g- 91 (231)
..++|+|| +.|+.+..++. |++|+..++.. ...+.. +...+..+.|+|||++|+..+.++
T Consensus 212 ~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~ 290 (741)
T 1yr2_A 212 SGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGT 290 (741)
T ss_dssp CCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTT
T ss_pred ccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccC
Confidence 57889999 98887776553 88888866542 222222 222478899999999988776543
Q ss_pred ----cEEEEeCCCc--eeeeeecCCCcceEEEEECCCCCEEEEeecC----CcEEEEECCCC--ceeeeccCCCCCeEEE
Q psy4391 92 ----TLKIWELSSG--KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD----ESVRIWDVRTG--KCLKTLPAHSDPVSAV 159 (231)
Q Consensus 92 ----~i~~~d~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~v~d~~~~--~~~~~~~~~~~~v~~~ 159 (231)
.|++||+.++ +....+..+....... ++|+++.|+..+.+ +.|.+||+.++ +....+..+...+..+
T Consensus 291 ~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~ 369 (741)
T 1yr2_A 291 DPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESV 369 (741)
T ss_dssp CSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEE
T ss_pred CCcceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEE
Confidence 7999999876 3134444333333333 34888888877653 45999999874 3333334444456677
Q ss_pred EEcCCCCeEEEEecCCeEEEEeCC-CCceeeeeecCCCCCeEEEEECCCCCEEEEEe----CCCeEEEEeC
Q psy4391 160 HFNRDGSLIVSSSYDGLCRIWDTA-SGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT----LDNTLKLWDS 225 (231)
Q Consensus 160 ~~~~~~~~l~~~~~dg~i~v~d~~-~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s----~d~~v~vwd~ 225 (231)
.++ ++.++++...|+..++|.+. +++....+.......+..+.++|+++.|+... ..+.|.+||.
T Consensus 370 ~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~ 439 (741)
T 1yr2_A 370 GIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDP 439 (741)
T ss_dssp EEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEET
T ss_pred EEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEEC
Confidence 777 56677788888876666433 34444444333345577888999998666432 2468888885
No 217
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.43 E-value=5.9e-10 Score=85.11 Aligned_cols=190 Identities=16% Similarity=0.066 Sum_probs=126.5
Q ss_pred ceEEEEECCCCC-EEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEecCCCcEEEEeCCCceeeeee
Q psy4391 29 AVSSVKFSPNGE-WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTL 107 (231)
Q Consensus 29 ~i~~~~~~~~~~-~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~ 107 (231)
-..++.|+|+++ ++++...++.|..|+..++... .+. ....+.+++|+++++++++. .+ .|.+||.++++.....
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~ 125 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHA 125 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEE
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEE-CCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEe
Confidence 346889999755 5556667789999998766543 232 23568899999999877665 33 4999999877653322
Q ss_pred cC----CCcceEEEEECCCCCEEEEeec------CCcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeEEEE-ecCCe
Q psy4391 108 KG----HSNYVFCCNFNPQSNLIVSGSF------DESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSS-SYDGL 176 (231)
Q Consensus 108 ~~----~~~~v~~~~~~~~~~~l~~~~~------d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~ 176 (231)
.. ....+..+.++|+|+++++... .+.|..++ +++. ..+.........++|+|+++.++.+ +.++.
T Consensus 126 ~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~-~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~ 202 (326)
T 2ghs_A 126 ELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKV-TKLFADISIPNSICFSPDGTTGYFVDTKVNR 202 (326)
T ss_dssp CSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEE-EEEEEEESSEEEEEECTTSCEEEEEETTTCE
T ss_pred eCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcE-EEeeCCCcccCCeEEcCCCCEEEEEECCCCE
Confidence 21 1245788999999997775542 24566666 4543 2222223456789999999877554 45689
Q ss_pred EEEEeCC--CC-cee--eeeec--CCCCCeEEEEECCCCCEEEEEeCCCeEEEEeC
Q psy4391 177 CRIWDTA--SG-QCL--KTLID--DDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225 (231)
Q Consensus 177 i~v~d~~--~~-~~~--~~~~~--~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~ 225 (231)
|.+||+. ++ +.. ..+.. ........++++++|.++++...++.|.+||.
T Consensus 203 I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~ 258 (326)
T 2ghs_A 203 LMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT 258 (326)
T ss_dssp EEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT
T ss_pred EEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC
Confidence 9999985 55 321 11211 12233567899999987777766789999986
No 218
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.43 E-value=1.6e-11 Score=94.44 Aligned_cols=196 Identities=12% Similarity=0.093 Sum_probs=128.8
Q ss_pred ccccceEEEEECCCCCEEEEEeC-----CCcEEEeecCCCcEEEEEecc------cccEEEEEECCCCCEE-EEec---C
Q psy4391 25 GHTKAVSSVKFSPNGEWLASSSA-----DKLIKIWGAYDGKFEKTISGH------KLGISDVAWSSDSRLL-VSGS---D 89 (231)
Q Consensus 25 ~h~~~i~~~~~~~~~~~l~~~~~-----dg~i~i~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l-~~~~---~ 89 (231)
+|-..+..++++++|+++++-.. ++.|.+||..+++....+... ...+.++++++++..+ ++.. .
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~ 143 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDD 143 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGG
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCC
Confidence 35568999999999886665432 578999999888766655421 1245789999865554 4444 5
Q ss_pred CCcEEEEeCCCceeeeeecCC-----------------------------CcceEEEEECCCCCEEEEeecCC-cEEEEE
Q psy4391 90 DKTLKIWELSSGKCLKTLKGH-----------------------------SNYVFCCNFNPQSNLIVSGSFDE-SVRIWD 139 (231)
Q Consensus 90 ~g~i~~~d~~~~~~~~~~~~~-----------------------------~~~v~~~~~~~~~~~l~~~~~d~-~i~v~d 139 (231)
++.|.+||+.+++..+.+..| ...+..++++|+++.|+.+...+ .+..++
T Consensus 144 ~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~ 223 (343)
T 2qe8_A 144 KAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIK 223 (343)
T ss_dssp GCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEE
T ss_pred CCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEE
Confidence 789999999877655544321 01256799999999888877665 555555
Q ss_pred CC---CCce-----ee--eccCCCCCeEEEEEcCCCCeEEEEecCCeEEEEeCCCCceeeeeecCCCCCeEEEEECCCCC
Q psy4391 140 VR---TGKC-----LK--TLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK 209 (231)
Q Consensus 140 ~~---~~~~-----~~--~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~ 209 (231)
.. .+.. .. ....+.+....++++++|.++++...++.|.+||..+++...............++++++|+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~ 303 (343)
T 2qe8_A 224 SADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGY 303 (343)
T ss_dssp HHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSC
T ss_pred HHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCc
Confidence 32 1110 00 00112234456899999999888888999999998556533222222233467899999998
Q ss_pred EEEEEeCCCeE
Q psy4391 210 YILAATLDNTL 220 (231)
Q Consensus 210 ~l~~~s~d~~v 220 (231)
++++.+..+++
T Consensus 304 l~v~~~~~~~~ 314 (343)
T 2qe8_A 304 LYFDCNQLHHS 314 (343)
T ss_dssp EEEEECCGGGS
T ss_pred EEEEeCccccc
Confidence 88777754444
No 219
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.41 E-value=3.7e-10 Score=87.85 Aligned_cols=184 Identities=10% Similarity=0.033 Sum_probs=125.5
Q ss_pred EECCCCCEEEEEeC--CC---cEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEec----------CCCcEEEEeC
Q psy4391 34 KFSPNGEWLASSSA--DK---LIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGS----------DDKTLKIWEL 98 (231)
Q Consensus 34 ~~~~~~~~l~~~~~--dg---~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~~g~i~~~d~ 98 (231)
...|++++++.+.. .+ .|.++|..+++....+.....+ .++++||+++++++. .++.|.+||.
T Consensus 27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~ 104 (373)
T 2mad_H 27 APGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDP 104 (373)
T ss_pred cCCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEEC
Confidence 34578887777653 22 7899999888887777654433 899999999998875 3578999999
Q ss_pred CCceeeeeecCC-------CcceEEEEECCCCCEEEEeec--CCcEEEEECCCCceeee-ccCCCCCeEEEEEcCCC-Ce
Q psy4391 99 SSGKCLKTLKGH-------SNYVFCCNFNPQSNLIVSGSF--DESVRIWDVRTGKCLKT-LPAHSDPVSAVHFNRDG-SL 167 (231)
Q Consensus 99 ~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~--d~~i~v~d~~~~~~~~~-~~~~~~~v~~~~~~~~~-~~ 167 (231)
.+.+.+..+... ......+.++|+|++++.++. ++.|.++| .+++.+.. +... +. +.+.|++ +.
T Consensus 105 ~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~-~~---~~~~~~~~~~ 179 (373)
T 2mad_H 105 VTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSP-TC---YHIHPGAPST 179 (373)
T ss_pred CCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCC-ce---EEEEeCCCce
Confidence 987776665432 123447889999999998874 47899999 99988777 5532 22 3455555 45
Q ss_pred EEEEecCCeEEEEeCCCCceeeeeec----CCCCC-eEEEEECCCCCEEEEEeCCCeEEEEeC
Q psy4391 168 IVSSSYDGLCRIWDTASGQCLKTLID----DDNPP-VSFVKFSPNGKYILAATLDNTLKLWDS 225 (231)
Q Consensus 168 l~~~~~dg~i~v~d~~~~~~~~~~~~----~~~~~-i~~~~~s~~g~~l~~~s~d~~v~vwd~ 225 (231)
+++.+.||.+.++|. +++....... ....+ .....+.+++..++..+.++.+.+.|.
T Consensus 180 ~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~ 241 (373)
T 2mad_H 180 FYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADI 241 (373)
T ss_pred EEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEec
Confidence 566778999999999 7765532210 11112 122455666655555556778887775
No 220
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.41 E-value=4.1e-11 Score=92.79 Aligned_cols=187 Identities=11% Similarity=0.125 Sum_probs=131.7
Q ss_pred EEECCCCCEEEEEeC-----CCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEec----------CCCcEEEEe
Q psy4391 33 VKFSPNGEWLASSSA-----DKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGS----------DDKTLKIWE 97 (231)
Q Consensus 33 ~~~~~~~~~l~~~~~-----dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~~g~i~~~d 97 (231)
....|++++++.... ++.|.+.|..+.+....+.....+ . ++++|||++++++. .++.|.+||
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD 115 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFD 115 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEE
Confidence 445789998888765 679999999999988888755554 4 99999999987775 357899999
Q ss_pred CCCceeeeeecCCC-------cceEEEEECCCCCEEEEeec--CCcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeE
Q psy4391 98 LSSGKCLKTLKGHS-------NYVFCCNFNPQSNLIVSGSF--DESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLI 168 (231)
Q Consensus 98 ~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~l~~~~~--d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 168 (231)
..+.+.+..+.... .....+.++|||++++.+.. ++.|.++|+.+++.+..+.... . ...+....+.+
T Consensus 116 ~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g--~-~~~~P~g~~~~ 192 (386)
T 3sjl_D 116 PVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD--C-YHIFPTAPDTF 192 (386)
T ss_dssp TTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS--E-EEEEEEETTEE
T ss_pred CCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC--c-ceeecCCCcee
Confidence 99988877764221 12345789999999988864 6889999999999888875432 1 12233344567
Q ss_pred EEEecCCeEEEEeCCC-Cceeeee---ecCCCCCe-EEEEE-CCCCCEEEEEeCCCeEEEEeC
Q psy4391 169 VSSSYDGLCRIWDTAS-GQCLKTL---IDDDNPPV-SFVKF-SPNGKYILAATLDNTLKLWDS 225 (231)
Q Consensus 169 ~~~~~dg~i~v~d~~~-~~~~~~~---~~~~~~~i-~~~~~-s~~g~~l~~~s~d~~v~vwd~ 225 (231)
++.+.||.+.+.++.+ ++..... ......++ ....| .++|++++ .+.+|+|.+.|.
T Consensus 193 ~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~ 254 (386)
T 3sjl_D 193 FMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDL 254 (386)
T ss_dssp EEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEEC
T ss_pred EEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEEC
Confidence 7778899988888876 5542211 11111222 12345 47886555 556899999996
No 221
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.38 E-value=5e-10 Score=81.61 Aligned_cols=195 Identities=10% Similarity=0.099 Sum_probs=133.2
Q ss_pred cceeEEeeccccc--ceEEEEECCCCCEEEEEeCCC--cEEEeecCCCcEEEEEecccccEEEEEECCCCCEE-EEecCC
Q psy4391 16 NYVLKFTLAGHTK--AVSSVKFSPNGEWLASSSADK--LIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLL-VSGSDD 90 (231)
Q Consensus 16 ~~~~~~~~~~h~~--~i~~~~~~~~~~~l~~~~~dg--~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~~ 90 (231)
.+.+..++ .|.. ....+.|+ ++.+..+.+.+| .|+++|..+++....+.-.. ........++++.| ...-.+
T Consensus 30 ~~~vv~~~-phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-~~FgeGit~~g~~ly~ltw~~ 106 (262)
T 3nol_A 30 DYQIVHSY-PHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK-RYFGEGISDWKDKIVGLTWKN 106 (262)
T ss_dssp EEEEEEEE-ECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT-TCCEEEEEEETTEEEEEESSS
T ss_pred ceEEEEEe-cCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCC-ccceeEEEEeCCEEEEEEeeC
Confidence 34444444 3443 35789998 666666666665 89999999999888775432 22222222334444 444568
Q ss_pred CcEEEEeCCCceeeeeecCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeeccCCC-----CCeEEEEEcCCC
Q psy4391 91 KTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHS-----DPVSAVHFNRDG 165 (231)
Q Consensus 91 g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~-----~~v~~~~~~~~~ 165 (231)
+.+.+||.++.+.+..+...... .. +.+++..|+.+..++.|.++|..+.+.+..+.... ..+..+.+. +|
T Consensus 107 ~~v~v~D~~t~~~~~ti~~~~eG-~g--lt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G 182 (262)
T 3nol_A 107 GLGFVWNIRNLRQVRSFNYDGEG-WG--LTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DG 182 (262)
T ss_dssp SEEEEEETTTCCEEEEEECSSCC-CC--EEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TT
T ss_pred CEEEEEECccCcEEEEEECCCCc-eE--EecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CC
Confidence 89999999999988888753322 22 33567777777778889999999988877765432 234457776 67
Q ss_pred CeEEEEecCCeEEEEeCCCCceeeeeecC-----------CCCCeEEEEECCCCCEEEEEeCC
Q psy4391 166 SLIVSSSYDGLCRIWDTASGQCLKTLIDD-----------DNPPVSFVKFSPNGKYILAATLD 217 (231)
Q Consensus 166 ~~l~~~~~dg~i~v~d~~~~~~~~~~~~~-----------~~~~i~~~~~s~~g~~l~~~s~d 217 (231)
+.++....++.|.+.|..+++.+..+... .....+.||++|+++.|++.+..
T Consensus 183 ~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~ 245 (262)
T 3nol_A 183 EIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKL 245 (262)
T ss_dssp EEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETT
T ss_pred EEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCC
Confidence 76666667889999999999988776432 12245889999999888888754
No 222
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.38 E-value=9e-11 Score=90.29 Aligned_cols=197 Identities=10% Similarity=0.096 Sum_probs=127.4
Q ss_pred cceEEEEECCCCCEEEEEe--CCCcEEEeecCCCcEEEEEe-------cccccEEEEEECCCCCEEEEecC-----CCcE
Q psy4391 28 KAVSSVKFSPNGEWLASSS--ADKLIKIWGAYDGKFEKTIS-------GHKLGISDVAWSSDSRLLVSGSD-----DKTL 93 (231)
Q Consensus 28 ~~i~~~~~~~~~~~l~~~~--~dg~i~i~~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~-----~g~i 93 (231)
.....++++++|+.+++.. .++.+++|.+.+++. ..+. .+...+..++++++++.+++-.. ++.|
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~-~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGL-IPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEE-EESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCe-ecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence 5788999999999888753 234245555444432 2221 23356889999999876665433 5789
Q ss_pred EEEeCCCceeeeeecCC------CcceEEEEECCCCCEE-EEee---cCCcEEEEECCCCceeeeccCC-----------
Q psy4391 94 KIWELSSGKCLKTLKGH------SNYVFCCNFNPQSNLI-VSGS---FDESVRIWDVRTGKCLKTLPAH----------- 152 (231)
Q Consensus 94 ~~~d~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l-~~~~---~d~~i~v~d~~~~~~~~~~~~~----------- 152 (231)
.+||+++++.++.+... ...+..+++++++..+ ++.. .++.|.+||+.+++....+..|
T Consensus 96 ~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~ 175 (343)
T 2qe8_A 96 VAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLV 175 (343)
T ss_dssp EEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCE
T ss_pred EEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccccccccee
Confidence 99999988866555421 2345678898865444 5544 5788999999877654443221
Q ss_pred ------------------CCCeEEEEEcCCCCeEEEEecCC-eEEEEeCC---CCc-----eeeeeec-CCCCCeEEEEE
Q psy4391 153 ------------------SDPVSAVHFNRDGSLIVSSSYDG-LCRIWDTA---SGQ-----CLKTLID-DDNPPVSFVKF 204 (231)
Q Consensus 153 ------------------~~~v~~~~~~~~~~~l~~~~~dg-~i~v~d~~---~~~-----~~~~~~~-~~~~~i~~~~~ 204 (231)
...+..++++|+++.|+.+..++ .+..++.. .+. ....+.. ........+++
T Consensus 176 ~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~ 255 (343)
T 2qe8_A 176 IDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISI 255 (343)
T ss_dssp ETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEE
T ss_pred ECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEE
Confidence 02357899999999888877665 55555431 110 0000000 11112345889
Q ss_pred CCCCCEEEEEeCCCeEEEEeC
Q psy4391 205 SPNGKYILAATLDNTLKLWDS 225 (231)
Q Consensus 205 s~~g~~l~~~s~d~~v~vwd~ 225 (231)
+++|.++++...++.|.+||.
T Consensus 256 d~~G~l~va~~~~~~V~~~d~ 276 (343)
T 2qe8_A 256 DKDHNIYVGDLAHSAIGVITS 276 (343)
T ss_dssp CTTCCEEEEEGGGTEEEEEET
T ss_pred CCCCCEEEEccCCCeEEEEEC
Confidence 999999888888999999997
No 223
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.36 E-value=3.7e-10 Score=88.38 Aligned_cols=188 Identities=14% Similarity=0.189 Sum_probs=128.7
Q ss_pred CCCCEEEE-EeCCCcEEEeecCCC----cEEEEEe-------cccccEEEEEECCCCCEEEEecCC------CcEEEEeC
Q psy4391 37 PNGEWLAS-SSADKLIKIWGAYDG----KFEKTIS-------GHKLGISDVAWSSDSRLLVSGSDD------KTLKIWEL 98 (231)
Q Consensus 37 ~~~~~l~~-~~~dg~i~i~~~~~~----~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~~------g~i~~~d~ 98 (231)
+++++|+. +..++.|.++|..+. +..+.+. ........+...|+| .++++..+ +.+.++|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 77887654 667789999998644 4455552 111245567888999 66665555 78999999
Q ss_pred CCceeeeeecCCC---cceEEEEECCCCCEEEEee-------------------cCCcEEEEECCCCceeeeccCCC--C
Q psy4391 99 SSGKCLKTLKGHS---NYVFCCNFNPQSNLIVSGS-------------------FDESVRIWDVRTGKCLKTLPAHS--D 154 (231)
Q Consensus 99 ~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~~-------------------~d~~i~v~d~~~~~~~~~~~~~~--~ 154 (231)
++.+.+..+.... .....+.|+|+++.+++.. .+.+|.+||+.+++.+..+.... .
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~ 251 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENR 251 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEE
T ss_pred CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCC
Confidence 9999888776321 2234577899999998885 36889999999888777766531 2
Q ss_pred CeEEEEE--cCCCCeEEEEec------CCeEEEEeCCCCcee--eee--ec---CC------------CCCeEEEEECCC
Q psy4391 155 PVSAVHF--NRDGSLIVSSSY------DGLCRIWDTASGQCL--KTL--ID---DD------------NPPVSFVKFSPN 207 (231)
Q Consensus 155 ~v~~~~~--~~~~~~l~~~~~------dg~i~v~d~~~~~~~--~~~--~~---~~------------~~~i~~~~~s~~ 207 (231)
....+.| +|+++++++++. ++.|.+|....++.. +.+ .. .. ......+.+|+|
T Consensus 252 ~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~D 331 (462)
T 2ece_A 252 MALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLD 331 (462)
T ss_dssp EEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTT
T ss_pred ccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCC
Confidence 3455656 999998887764 567876654433211 111 00 00 123467889999
Q ss_pred CCEEEEEeC-CCeEEEEeC
Q psy4391 208 GKYILAATL-DNTLKLWDS 225 (231)
Q Consensus 208 g~~l~~~s~-d~~v~vwd~ 225 (231)
|++|+++.. .+.|.+||.
T Consensus 332 GrfLYVSnrg~d~VavfdV 350 (462)
T 2ece_A 332 DKFLYLSLWGIGEVRQYDI 350 (462)
T ss_dssp SCEEEEEETTTTEEEEEEC
T ss_pred CCEEEEEeCCCCEEEEEEe
Confidence 999988876 679999995
No 224
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.35 E-value=1.2e-10 Score=90.09 Aligned_cols=190 Identities=11% Similarity=0.006 Sum_probs=120.4
Q ss_pred EEEECCCCCEEEEEe----------CCCcEEEeecCCCcEEEEEecc-------cccEEEEEECCCCCEEEEecC--CCc
Q psy4391 32 SVKFSPNGEWLASSS----------ADKLIKIWGAYDGKFEKTISGH-------KLGISDVAWSSDSRLLVSGSD--DKT 92 (231)
Q Consensus 32 ~~~~~~~~~~l~~~~----------~dg~i~i~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~--~g~ 92 (231)
.+.++||+++++.+. .++.|.+||..+++....+... ......++++|||++++++.. +..
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~ 148 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAA 148 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCE
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCe
Confidence 799999999888875 3688999999999988887532 123456899999999988764 456
Q ss_pred EEE--EeCCCceeeeeecCC------------------CcceEEEEE--------------------------CCCCCEE
Q psy4391 93 LKI--WELSSGKCLKTLKGH------------------SNYVFCCNF--------------------------NPQSNLI 126 (231)
Q Consensus 93 i~~--~d~~~~~~~~~~~~~------------------~~~v~~~~~--------------------------~~~~~~l 126 (231)
+.+ +|..+ +..+... .+.+..+.. .+++..+
T Consensus 149 v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~ 225 (368)
T 1mda_H 149 AGLSVPGASD---DQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGML 225 (368)
T ss_dssp EEEEETTTEE---EEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEE
T ss_pred EEEEEEchhh---ceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCccccccCCEE
Confidence 888 88865 2222110 000000111 2222333
Q ss_pred EEeecCCcEEEEECCCCc--eeeeccCC----------CCCeEEEEEcCCCCeEEEEec-C--------CeEEEEeCCCC
Q psy4391 127 VSGSFDESVRIWDVRTGK--CLKTLPAH----------SDPVSAVHFNRDGSLIVSSSY-D--------GLCRIWDTASG 185 (231)
Q Consensus 127 ~~~~~d~~i~v~d~~~~~--~~~~~~~~----------~~~v~~~~~~~~~~~l~~~~~-d--------g~i~v~d~~~~ 185 (231)
+..+. +.+.+.|+..+. .+..+... ......++++|+++.++++.. . +.+.++|+.++
T Consensus 226 ~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~ 304 (368)
T 1mda_H 226 VWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVG 304 (368)
T ss_dssp EECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSC
T ss_pred EEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCC
Confidence 33333 667777775432 22222110 011112679999998886543 2 35669999999
Q ss_pred ceeeeeecCCCCCeEEEEECCCCCE-EEEEe-CCCeEEEEeCCC
Q psy4391 186 QCLKTLIDDDNPPVSFVKFSPNGKY-ILAAT-LDNTLKLWDSYP 227 (231)
Q Consensus 186 ~~~~~~~~~~~~~i~~~~~s~~g~~-l~~~s-~d~~v~vwd~~~ 227 (231)
+.+..+.... ....++|+|||++ +++.. .++.|.++|...
T Consensus 305 ~vv~~i~vg~--~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t 346 (368)
T 1mda_H 305 QTSGPISNGH--DSDAIIAAQDGASDNYANSAGTEVLDIYDAAS 346 (368)
T ss_dssp CEEECCEEEE--EECEEEECCSSSCEEEEEETTTTEEEEEESSS
T ss_pred eEEEEEECCC--CcceEEECCCCCEEEEEccCCCCeEEEEECCC
Confidence 9887775443 3467899999985 45555 489999999743
No 225
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.34 E-value=1.3e-10 Score=91.31 Aligned_cols=183 Identities=13% Similarity=0.137 Sum_probs=129.2
Q ss_pred CCCCEEEEEeCC-----CcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEec----------CCCcEEEEeCCCc
Q psy4391 37 PNGEWLASSSAD-----KLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGS----------DDKTLKIWELSSG 101 (231)
Q Consensus 37 ~~~~~l~~~~~d-----g~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~~g~i~~~d~~~~ 101 (231)
+++++++++... +.|.++|..+.+....+.....+ .++++||+++++++. .++.|.++|..+.
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 477777665543 69999999999998888755555 899999999988776 4678999999998
Q ss_pred eeeeeecCC-------CcceEEEEECCCCCEEEEeec--CCcEEEEECCCCceeeeccCCCCCeEEEEEcCCC-CeEEEE
Q psy4391 102 KCLKTLKGH-------SNYVFCCNFNPQSNLIVSGSF--DESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDG-SLIVSS 171 (231)
Q Consensus 102 ~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~--d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~ 171 (231)
+.+..+... ......+.++|+|++++.+.. ++.|.++|+.+++.+..+.... . ....|++ ..+++.
T Consensus 160 ~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g--~--~~~~p~g~~~~v~~ 235 (426)
T 3c75_H 160 LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPD--C--YHIFPASPTVFYMN 235 (426)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS--E--EEEEEEETTEEEEE
T ss_pred cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCC--c--eeeccCCCcEEEEE
Confidence 887766421 122345789999999998874 5789999999999888776532 1 2333433 455666
Q ss_pred ecCCeEEEEeCCCCceeeee---ecCCCCC-eEEEEECCCCCEEEEEeCCCeEEEEeC
Q psy4391 172 SYDGLCRIWDTASGQCLKTL---IDDDNPP-VSFVKFSPNGKYILAATLDNTLKLWDS 225 (231)
Q Consensus 172 ~~dg~i~v~d~~~~~~~~~~---~~~~~~~-i~~~~~s~~g~~l~~~s~d~~v~vwd~ 225 (231)
+.||.+.+.++.+++..... ......+ ...+.+++++..++..+..+.|.+.|.
T Consensus 236 ~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~ 293 (426)
T 3c75_H 236 CRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADL 293 (426)
T ss_dssp ETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEE
T ss_pred cCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEec
Confidence 77888888887655543211 1111111 123567899888888888888888885
No 226
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.32 E-value=6.2e-09 Score=75.23 Aligned_cols=197 Identities=10% Similarity=0.083 Sum_probs=133.4
Q ss_pred CccceeEEeecccc--cceEEEEECCCCCEEEEEeCC--CcEEEeecCCCcEEEEEeccccc-EEEEEECCCCCEEEEec
Q psy4391 14 KPNYVLKFTLAGHT--KAVSSVKFSPNGEWLASSSAD--KLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSDSRLLVSGS 88 (231)
Q Consensus 14 ~~~~~~~~~~~~h~--~~i~~~~~~~~~~~l~~~~~d--g~i~i~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~ 88 (231)
.-.+.+..+. .|. .....+.|+. +.+..+.+.. +.|+.+|..+++....+.-.... -..++... ++.....-
T Consensus 6 ~~~~~v~~~~-phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~-~~ly~ltw 82 (243)
T 3mbr_X 6 TQGYRVVKRY-PHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWR-DRLIQLTW 82 (243)
T ss_dssp BCCEEEEEEE-ECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEET-TEEEEEES
T ss_pred ccceEEEEEc-CCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeC-CEEEEEEe
Confidence 3344554444 454 4467899986 5555666665 48999999999988877533221 12233332 33344556
Q ss_pred CCCcEEEEeCCCceeeeeecCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeeccCCC-----CCeEEEEEcC
Q psy4391 89 DDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHS-----DPVSAVHFNR 163 (231)
Q Consensus 89 ~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~-----~~v~~~~~~~ 163 (231)
.++.+.+||.++.+.+..+...... ..++ +++..|+.+..++.|.++|..+.+.+..+.... ..+..+.+.
T Consensus 83 ~~~~v~v~D~~tl~~~~ti~~~~~G-wglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~- 158 (243)
T 3mbr_X 83 RNHEGFVYDLATLTPRARFRYPGEG-WALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV- 158 (243)
T ss_dssp SSSEEEEEETTTTEEEEEEECSSCC-CEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-
T ss_pred eCCEEEEEECCcCcEEEEEeCCCCc-eEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-
Confidence 7889999999999988888754332 2333 456667767778899999999988877765532 234556665
Q ss_pred CCCeEEEEecCCeEEEEeCCCCceeeeeecC------------CCCCeEEEEECCCCCEEEEEeCC
Q psy4391 164 DGSLIVSSSYDGLCRIWDTASGQCLKTLIDD------------DNPPVSFVKFSPNGKYILAATLD 217 (231)
Q Consensus 164 ~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~------------~~~~i~~~~~s~~g~~l~~~s~d 217 (231)
+|+.++....+..|.+.|..+++.+..+... .....+.||++|+++.|++.+.-
T Consensus 159 ~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~ 224 (243)
T 3mbr_X 159 NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKR 224 (243)
T ss_dssp TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETT
T ss_pred CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCC
Confidence 6776666656889999999999988776422 12346889999998888777753
No 227
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.31 E-value=5.5e-10 Score=86.52 Aligned_cols=191 Identities=13% Similarity=0.164 Sum_probs=124.7
Q ss_pred EEEEECCCCCEEEEEeC--CCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEecCCCcEEEEeCCC-ceeeeee
Q psy4391 31 SSVKFSPNGEWLASSSA--DKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSS-GKCLKTL 107 (231)
Q Consensus 31 ~~~~~~~~~~~l~~~~~--dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~~-~~~~~~~ 107 (231)
..++|+|||++++++.. ++.|.++|..+++....+.... + ...+....+.+++.+.||.+.+.++.+ ++.....
T Consensus 140 ~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g--~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~ 216 (386)
T 3sjl_D 140 WMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD--C-YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITH 216 (386)
T ss_dssp GGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS--E-EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEE
T ss_pred ceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC--c-ceeecCCCceeEEECCCCCEEEEECCCCCeEEEee
Confidence 35899999999988764 6899999999998888775321 1 122333345566777788888888765 4432111
Q ss_pred c----CCCcceE-EEEE-CCCCCEEEEeecCCcEEEEECCCCc--eeeecc----------CCCCCeEEEEEcCCCCeEE
Q psy4391 108 K----GHSNYVF-CCNF-NPQSNLIVSGSFDESVRIWDVRTGK--CLKTLP----------AHSDPVSAVHFNRDGSLIV 169 (231)
Q Consensus 108 ~----~~~~~v~-~~~~-~~~~~~l~~~~~d~~i~v~d~~~~~--~~~~~~----------~~~~~v~~~~~~~~~~~l~ 169 (231)
. .....+. ...| .++|++++ .+.+|.+++.|+.++. ....+. ...+....++++|+++.++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~ly 295 (386)
T 3sjl_D 217 TEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIY 295 (386)
T ss_dssp CCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEE
T ss_pred cceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEE
Confidence 1 1111111 1244 35675555 5557999999997654 222221 0112333577899998887
Q ss_pred EEec----------CCeEEEEeCCCCceeeeeecCCCCCeEEEEECCCCC-EEEEEe-CCCeEEEEeCCC
Q psy4391 170 SSSY----------DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK-YILAAT-LDNTLKLWDSYP 227 (231)
Q Consensus 170 ~~~~----------dg~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~-~l~~~s-~d~~v~vwd~~~ 227 (231)
.... ...|.++|+.+++.+.++.... ....+++++|++ +|+++. .++.|.++|...
T Consensus 296 V~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~--~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t 363 (386)
T 3sjl_D 296 LLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGH--EIDSINVSQDEKPLLYALSTGDKTLYIHDAES 363 (386)
T ss_dssp EEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE--EECEEEECSSSSCEEEEEETTTTEEEEEETTT
T ss_pred EEeccccccccCCCCCEEEEEECCCCeEEEEEECCC--CcceEEECCCCCeEEEEEcCCCCeEEEEECCC
Confidence 7643 2579999999999888876543 456799999997 666654 489999999743
No 228
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.31 E-value=7.9e-10 Score=80.61 Aligned_cols=180 Identities=9% Similarity=0.040 Sum_probs=126.9
Q ss_pred ceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecccccE--EEEEECCCCCEEEEecCCCcEEEEeCCCceeeee
Q psy4391 29 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI--SDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKT 106 (231)
Q Consensus 29 ~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~ 106 (231)
....+.|+ ++.+..+.+.+|.|+++|..+++....+ -. ... ..++... ++.....-.++.+.+||.++.+.+..
T Consensus 56 ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~-~~~FgeGit~~g-~~Ly~ltw~~~~v~V~D~~Tl~~~~t 131 (268)
T 3nok_A 56 FTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RL-GNIFAEGLASDG-ERLYQLTWTEGLLFTWSGMPPQRERT 131 (268)
T ss_dssp CEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-EC-TTCCEEEEEECS-SCEEEEESSSCEEEEEETTTTEEEEE
T ss_pred ccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CC-CCcceeEEEEeC-CEEEEEEccCCEEEEEECCcCcEEEE
Confidence 35788887 3556677788889999999999877666 22 222 2344443 23444555788999999999998888
Q ss_pred ecCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeeccCCCC-----CeEEEEEcCCCCeEEEEecCCeEEEEe
Q psy4391 107 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSD-----PVSAVHFNRDGSLIVSSSYDGLCRIWD 181 (231)
Q Consensus 107 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~~dg~i~v~d 181 (231)
+...... ..++ +++..|+.+..++.|.++|.++.+.+..+..... .+..+.|. +|+.++....+..|.+.|
T Consensus 132 i~~~~eG-wGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vID 207 (268)
T 3nok_A 132 TRYSGEG-WGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEID 207 (268)
T ss_dssp EECSSCC-CCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEEC
T ss_pred EeCCCce-eEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEe
Confidence 8753322 2333 5677777777789999999999988777654322 34567776 676666665788999999
Q ss_pred CCCCceeeeeecC------------CCCCeEEEEECCCCCEEEEEeC
Q psy4391 182 TASGQCLKTLIDD------------DNPPVSFVKFSPNGKYILAATL 216 (231)
Q Consensus 182 ~~~~~~~~~~~~~------------~~~~i~~~~~s~~g~~l~~~s~ 216 (231)
..+++.+..+... .....+.||++|+++.|++.+.
T Consensus 208 p~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 208 PATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp TTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred CCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 9999987776422 1235688999998877777664
No 229
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.24 E-value=1.2e-09 Score=91.61 Aligned_cols=190 Identities=13% Similarity=0.077 Sum_probs=121.6
Q ss_pred EEEEECCCCCEEEEEeCCC-------------cEEEeecCCCcE--EEEEec---ccccEEEEEECCCCCEEEEecC---
Q psy4391 31 SSVKFSPNGEWLASSSADK-------------LIKIWGAYDGKF--EKTISG---HKLGISDVAWSSDSRLLVSGSD--- 89 (231)
Q Consensus 31 ~~~~~~~~~~~l~~~~~dg-------------~i~i~~~~~~~~--~~~~~~---~~~~v~~~~~~~~~~~l~~~~~--- 89 (231)
..++|+ ||+.|+.+..+. .|++|++.+... ...... +......+.|+|||++|+....
T Consensus 178 ~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~ 256 (693)
T 3iuj_A 178 SGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANST 256 (693)
T ss_dssp CCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSS
T ss_pred ccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCC
Confidence 567899 999888877663 388888765542 222322 2334678899999998854332
Q ss_pred -CCcEEEEeCCCce-eeeeecCCCcceEEEEECCCCCEEEEee-cC---CcEEEEECCCCce--eeeccCCCCCeEEEEE
Q psy4391 90 -DKTLKIWELSSGK-CLKTLKGHSNYVFCCNFNPQSNLIVSGS-FD---ESVRIWDVRTGKC--LKTLPAHSDPVSAVHF 161 (231)
Q Consensus 90 -~g~i~~~d~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d---~~i~v~d~~~~~~--~~~~~~~~~~v~~~~~ 161 (231)
...|+++|+.++. ....+..+....... +++++..|+..+ .+ +.|..+|+.++.. ...+..+...+. .|
T Consensus 257 ~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~ 333 (693)
T 3iuj_A 257 SGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TV 333 (693)
T ss_dssp SCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EE
T ss_pred CCcEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EE
Confidence 2489999997753 233444444433333 566666555443 33 5789999987653 234444544444 88
Q ss_pred cCCCCeEEEEecC-C--eEEEEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEeCC----CeEEEEeC
Q psy4391 162 NRDGSLIVSSSYD-G--LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD----NTLKLWDS 225 (231)
Q Consensus 162 ~~~~~~l~~~~~d-g--~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d----~~v~vwd~ 225 (231)
+++++.|+....+ + .|.+||+..+. ...+.......+..+.++++++.|+....+ +.|..||.
T Consensus 334 s~~g~~lv~~~~~~g~~~l~~~d~~g~~-~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~ 403 (693)
T 3iuj_A 334 HSGSGYLFAEYMVDATARVEQFDYEGKR-VREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEP 403 (693)
T ss_dssp EEETTEEEEEEEETTEEEEEEECTTSCE-EEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECT
T ss_pred EEECCEEEEEEEECCeeEEEEEECCCCe-eEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEEC
Confidence 9999988766654 4 68899987543 344433333446667788888877666544 78888885
No 230
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.21 E-value=3.6e-09 Score=82.85 Aligned_cols=185 Identities=16% Similarity=0.222 Sum_probs=124.0
Q ss_pred eEEEEECCCCCEEEEEeCC------CcEEEeecCCCcEEEEEeccccc---EEEEEECCCCCEEEEec------------
Q psy4391 30 VSSVKFSPNGEWLASSSAD------KLIKIWGAYDGKFEKTISGHKLG---ISDVAWSSDSRLLVSGS------------ 88 (231)
Q Consensus 30 i~~~~~~~~~~~l~~~~~d------g~i~i~~~~~~~~~~~~~~~~~~---v~~~~~~~~~~~l~~~~------------ 88 (231)
-..+..+|+| +++++..+ |.+.++|..+.+....+...... -.++-|+|+++.+++..
T Consensus 140 Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~ 218 (462)
T 2ece_A 140 LHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLK 218 (462)
T ss_dssp EEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCC
T ss_pred ccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccc
Confidence 4466788999 65554333 68999999999888887632221 23477899999888874
Q ss_pred -------CCCcEEEEeCCCceeeeeecCCC--cceEEEEE--CCCCCEEEEeec------CCcEEEEECCCCce--eee-
Q psy4391 89 -------DDKTLKIWELSSGKCLKTLKGHS--NYVFCCNF--NPQSNLIVSGSF------DESVRIWDVRTGKC--LKT- 148 (231)
Q Consensus 89 -------~~g~i~~~d~~~~~~~~~~~~~~--~~v~~~~~--~~~~~~l~~~~~------d~~i~v~d~~~~~~--~~~- 148 (231)
.+..|.+||+.+++.+..+.... .....+.| +|++++.+.++. ++.|.+|....++. ...
T Consensus 219 ~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vI 298 (462)
T 2ece_A 219 LEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVI 298 (462)
T ss_dssp TTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEE
T ss_pred hhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEE
Confidence 36799999999888777776531 23444545 999998888775 55777655443321 000
Q ss_pred -ccC----------------CCCCeEEEEEcCCCCeEEEEec-CCeEEEEeCCC---CceeeeeecCCC---------C-
Q psy4391 149 -LPA----------------HSDPVSAVHFNRDGSLIVSSSY-DGLCRIWDTAS---GQCLKTLIDDDN---------P- 197 (231)
Q Consensus 149 -~~~----------------~~~~v~~~~~~~~~~~l~~~~~-dg~i~v~d~~~---~~~~~~~~~~~~---------~- 197 (231)
+.. .......+.++||+++|+++.. .+.|.+||+.. .+.+..+..... .
T Consensus 299 di~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~ 378 (462)
T 2ece_A 299 EIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHK 378 (462)
T ss_dssp EECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCC
T ss_pred eCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeecccccccccc
Confidence 000 0234678999999999987765 57999999853 344444433211 0
Q ss_pred ---CeEEEEECCCCCEEEEEe
Q psy4391 198 ---PVSFVKFSPNGKYILAAT 215 (231)
Q Consensus 198 ---~i~~~~~s~~g~~l~~~s 215 (231)
.-..++++|||++|+++.
T Consensus 379 ~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 379 LTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CCSCCCCEEECTTSSEEEEEC
T ss_pred CCCCCCEEEEcCCCCEEEEEc
Confidence 124588999999999988
No 231
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.19 E-value=1.6e-07 Score=69.37 Aligned_cols=194 Identities=10% Similarity=0.021 Sum_probs=121.1
Q ss_pred cceEEEEECCCCCEEEEE-eCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEE-EecCCCcEEEEeCCCceeee
Q psy4391 28 KAVSSVKFSPNGEWLASS-SADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV-SGSDDKTLKIWELSSGKCLK 105 (231)
Q Consensus 28 ~~i~~~~~~~~~~~l~~~-~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~~g~i~~~d~~~~~~~~ 105 (231)
..+..++|++++..|+.+ ..++.|..++.........+.........+++++++..++ +....+.|.+++++......
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~ 115 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRV 115 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEE
Confidence 356789999977666554 4567899999865544333333334678899999765554 44556789999987543222
Q ss_pred eecCCCcceEEEEECCCCCEEEEeec---CCcEEEEECCCCceeeec-cCCCCCeEEEEEcCCCCeEEEE-ecCCeEEEE
Q psy4391 106 TLKGHSNYVFCCNFNPQSNLIVSGSF---DESVRIWDVRTGKCLKTL-PAHSDPVSAVHFNRDGSLIVSS-SYDGLCRIW 180 (231)
Q Consensus 106 ~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~v~d~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~v~ 180 (231)
...........++++|++..++.+.. .+.|..+++.... ...+ .........++++|++..|+.+ ...+.|.++
T Consensus 116 ~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~ 194 (267)
T 1npe_A 116 LFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECL 194 (267)
T ss_dssp EECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-CEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-cEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEE
Confidence 22222245678999997666555543 3678888876432 2222 1223457889999987766554 456799999
Q ss_pred eCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEe-CCCeEEEEeCC
Q psy4391 181 DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT-LDNTLKLWDSY 226 (231)
Q Consensus 181 d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s-~d~~v~vwd~~ 226 (231)
|+..... ..+......+ ..++.. +..|+.+. .++.|.++|..
T Consensus 195 ~~~g~~~-~~~~~~~~~P-~gi~~d--~~~lyva~~~~~~v~~~d~~ 237 (267)
T 1npe_A 195 NPAQPGR-RKVLEGLQYP-FAVTSY--GKNLYYTDWKTNSVIAMDLA 237 (267)
T ss_dssp ETTEEEE-EEEEECCCSE-EEEEEE--TTEEEEEETTTTEEEEEETT
T ss_pred ecCCCce-EEEecCCCCc-eEEEEe--CCEEEEEECCCCeEEEEeCC
Confidence 9975443 2232222222 456654 45555555 46799999863
No 232
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.14 E-value=1.8e-07 Score=69.12 Aligned_cols=184 Identities=6% Similarity=-0.035 Sum_probs=112.3
Q ss_pred CEEEEEeCCCcEEEeecCCCcE-----EEEEecccccEEEEEECCCCCEEE-EecCCCcEEEEeCCCceeeeeecCCCcc
Q psy4391 40 EWLASSSADKLIKIWGAYDGKF-----EKTISGHKLGISDVAWSSDSRLLV-SGSDDKTLKIWELSSGKCLKTLKGHSNY 113 (231)
Q Consensus 40 ~~l~~~~~dg~i~i~~~~~~~~-----~~~~~~~~~~v~~~~~~~~~~~l~-~~~~~g~i~~~d~~~~~~~~~~~~~~~~ 113 (231)
.+|+.+. .+.|+.++...... ...+......+..++|+++++.|+ +...++.|..++.........+......
T Consensus 2 ~~l~~~~-~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~ 80 (267)
T 1npe_A 2 THLLFAQ-TGKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGS 80 (267)
T ss_dssp EEEEEEE-EEEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCC
T ss_pred cEEEEEc-CCeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCC
Confidence 3444444 34677777654321 112222234567899999766555 4455789999998765443333333345
Q ss_pred eEEEEECCCCCEEEEe-ecCCcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeEEEEec---CCeEEEEeCCCCceee
Q psy4391 114 VFCCNFNPQSNLIVSG-SFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY---DGLCRIWDTASGQCLK 189 (231)
Q Consensus 114 v~~~~~~~~~~~l~~~-~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~i~v~d~~~~~~~~ 189 (231)
...+++++++..++.+ ...+.|.++++..................++++|++..|+.+.. .+.|..+++.... ..
T Consensus 81 p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~ 159 (267)
T 1npe_A 81 PEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RR 159 (267)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-CE
T ss_pred ccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-cE
Confidence 7789999976555544 55678999998744322222222245788999997666655543 3688888876432 23
Q ss_pred eeecCCCCCeEEEEECCCCCEEEEEeC-CCeEEEEeC
Q psy4391 190 TLIDDDNPPVSFVKFSPNGKYILAATL-DNTLKLWDS 225 (231)
Q Consensus 190 ~~~~~~~~~i~~~~~s~~g~~l~~~s~-d~~v~vwd~ 225 (231)
.+..........+++++++..|+.+.. .++|.++|.
T Consensus 160 ~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~ 196 (267)
T 1npe_A 160 ILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNP 196 (267)
T ss_dssp EEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred EEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEec
Confidence 332222234577999998877766554 579999985
No 233
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.13 E-value=1e-08 Score=85.82 Aligned_cols=182 Identities=13% Similarity=0.189 Sum_probs=124.5
Q ss_pred EEEEECCCCCEEEEEeCCC-------------------cEEEeecCCCcEEEEEeccc---------ccEEEEEECCCC-
Q psy4391 31 SSVKFSPNGEWLASSSADK-------------------LIKIWGAYDGKFEKTISGHK---------LGISDVAWSSDS- 81 (231)
Q Consensus 31 ~~~~~~~~~~~l~~~~~dg-------------------~i~i~~~~~~~~~~~~~~~~---------~~v~~~~~~~~~- 81 (231)
..+++++++.+++.+..++ .|..+|..+++....+.... ....-+....+|
T Consensus 246 ~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~ 325 (677)
T 1kb0_A 246 DSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGK 325 (677)
T ss_dssp SCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTE
T ss_pred cceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCc
Confidence 3578889888888876654 48889999998776654311 111122223366
Q ss_pred --CEEEEecCCCcEEEEeCCCceeeeeecCCC-c----------ce------------------------EEEEECCCCC
Q psy4391 82 --RLLVSGSDDKTLKIWELSSGKCLKTLKGHS-N----------YV------------------------FCCNFNPQSN 124 (231)
Q Consensus 82 --~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~-~----------~v------------------------~~~~~~~~~~ 124 (231)
..++.++.+|.++++|.++++.+..+.... . .+ ..++++|++.
T Consensus 326 ~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~ 405 (677)
T 1kb0_A 326 PRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTG 405 (677)
T ss_dssp EEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTT
T ss_pred EeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCC
Confidence 678899999999999999998765543211 0 00 1356788888
Q ss_pred EEEEeecC-------------------------------------------CcEEEEECCCCceeeeccCCCCCeEEEEE
Q psy4391 125 LIVSGSFD-------------------------------------------ESVRIWDVRTGKCLKTLPAHSDPVSAVHF 161 (231)
Q Consensus 125 ~l~~~~~d-------------------------------------------~~i~v~d~~~~~~~~~~~~~~~~v~~~~~ 161 (231)
++++...+ +.|..||+.+++.+..+... .++....+
T Consensus 406 ~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~-~~~~~g~~ 484 (677)
T 1kb0_A 406 LVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHV-SPWNGGTL 484 (677)
T ss_dssp EEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEES-SSCCCCEE
T ss_pred EEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCC-CCCcCcce
Confidence 88775431 67999999999988776532 23333445
Q ss_pred cCCCCeEEEEecCCeEEEEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEE
Q psy4391 162 NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILA 213 (231)
Q Consensus 162 ~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~ 213 (231)
...+..++.++.||.+++||+.+++.+..+.........-+.+.++|+.+++
T Consensus 485 ~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~v~ 536 (677)
T 1kb0_A 485 TTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYVS 536 (677)
T ss_dssp EETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred EeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEEEEE
Confidence 5677888889999999999999999888776544322233556778864443
No 234
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.13 E-value=6.8e-09 Score=84.00 Aligned_cols=185 Identities=11% Similarity=0.099 Sum_probs=126.4
Q ss_pred CCCCEEEEEeC-CCcEEEeecCCCcEEEEEecc-cccEEEEEE-C-CCCCEEEEec------------------CCCcEE
Q psy4391 37 PNGEWLASSSA-DKLIKIWGAYDGKFEKTISGH-KLGISDVAW-S-SDSRLLVSGS------------------DDKTLK 94 (231)
Q Consensus 37 ~~~~~l~~~~~-dg~i~i~~~~~~~~~~~~~~~-~~~v~~~~~-~-~~~~~l~~~~------------------~~g~i~ 94 (231)
+||++++.... ++.|.+.|..+.+....+.-. ......+++ + |+++++++++ .++.+.
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 38888876554 567999999998877755422 235778887 5 9999998874 235788
Q ss_pred EEeCCCceeeeeecCCCcceEEEEECCCCCEEEEeecCC--------------------------------------cEE
Q psy4391 95 IWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE--------------------------------------SVR 136 (231)
Q Consensus 95 ~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--------------------------------------~i~ 136 (231)
+.|.++.+...++.... ....++++|+|+++++.+.+. .|.
T Consensus 179 vID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~ 257 (595)
T 1fwx_A 179 AVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVK 257 (595)
T ss_dssp EEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEE
T ss_pred EEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEE
Confidence 99999988877766322 234567899999988887543 366
Q ss_pred EEECCC--Cce-eeeccCCCCCeEEEEEcCCCCeEEEEe-cCCeEEEEeCCCCc------------eeeeeecCCCCCeE
Q psy4391 137 IWDVRT--GKC-LKTLPAHSDPVSAVHFNRDGSLIVSSS-YDGLCRIWDTASGQ------------CLKTLIDDDNPPVS 200 (231)
Q Consensus 137 v~d~~~--~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~v~d~~~~~------------~~~~~~~~~~~~i~ 200 (231)
+.|.++ ++. +..+... ....++.++|||+++++++ .+.++.++|+.+.+ ....+. -+..-.
T Consensus 258 VID~~~~~~~~~~~~Ipvg-~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~--vG~gP~ 334 (595)
T 1fwx_A 258 VVDGRKEASSLFTRYIPIA-NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE--LGLGPL 334 (595)
T ss_dssp EEECSGGGCCSSEEEEEEE-SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB--CCSCEE
T ss_pred EEeCcccCCceeEEEEecC-CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC--CCCCcc
Confidence 677766 333 3333321 2334688999999887665 56899999998653 122222 222346
Q ss_pred EEEECCCCCEEEEEeCCCeEEEEeC
Q psy4391 201 FVKFSPNGKYILAATLDNTLKLWDS 225 (231)
Q Consensus 201 ~~~~s~~g~~l~~~s~d~~v~vwd~ 225 (231)
.++|+|+|...++.-.|++|.+||.
T Consensus 335 h~aF~~dG~aY~t~~ldsqV~kwdi 359 (595)
T 1fwx_A 335 HTAFDGRGNAYTSLFLDSQVVKWNI 359 (595)
T ss_dssp EEEECTTSEEEEEETTTTEEEEEEH
T ss_pred eEEECCCCeEEEEEecCCcEEEEEh
Confidence 7899999943344556999999995
No 235
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.13 E-value=5.6e-07 Score=65.82 Aligned_cols=210 Identities=17% Similarity=0.191 Sum_probs=134.3
Q ss_pred CCccceeEEe---ecccccceEEEEECCCCCEE-EEEeCCCcEEEeecCCCcEEEEEe-cccccEEEEEECCCCCEEEEe
Q psy4391 13 PKPNYVLKFT---LAGHTKAVSSVKFSPNGEWL-ASSSADKLIKIWGAYDGKFEKTIS-GHKLGISDVAWSSDSRLLVSG 87 (231)
Q Consensus 13 ~~~~~~~~~~---~~~h~~~i~~~~~~~~~~~l-~~~~~dg~i~i~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~ 87 (231)
+-|.|.+... +.+-...+..++|+|++..| ++...++.|...|.. ++..+.+. ........+++.+++.++++.
T Consensus 9 ~l~~y~~~~~~~~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~ 87 (255)
T 3qqz_A 9 SFQNYHATIDGKEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISD 87 (255)
T ss_dssp CCTTCEEEEEEEECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEE
T ss_pred CccceEEEEeceECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEE
Confidence 3444555544 55666789999999987755 457778889988987 77666653 223567888999988877776
Q ss_pred cCCCcEEEEeCCCcee---eeeec------CCCcceEEEEECCCCCEEEEeecCCcEEEEECCC---Cceeeec------
Q psy4391 88 SDDKTLKIWELSSGKC---LKTLK------GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT---GKCLKTL------ 149 (231)
Q Consensus 88 ~~~g~i~~~d~~~~~~---~~~~~------~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~---~~~~~~~------ 149 (231)
-.++.+.++++..... ..... ..+.....++++|.++.|+++.+.....+|..+. ...+...
T Consensus 88 E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~ 167 (255)
T 3qqz_A 88 ERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQ 167 (255)
T ss_dssp TTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHH
T ss_pred CCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhc
Confidence 6778888888764331 12221 1233457899999997777777655555555431 1111111
Q ss_pred -cCCCCCeEEEEEcCCCC-eEEEEecCCeEEEEeCCCCceeeeeecCC--------CCCeEEEEECCCCCEEEEEeCCCe
Q psy4391 150 -PAHSDPVSAVHFNRDGS-LIVSSSYDGLCRIWDTASGQCLKTLIDDD--------NPPVSFVKFSPNGKYILAATLDNT 219 (231)
Q Consensus 150 -~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~v~d~~~~~~~~~~~~~~--------~~~i~~~~~s~~g~~l~~~s~d~~ 219 (231)
......+.+++++|... +++.......+..+|... +.+..+.... -+.-..|+|+++|+ |+..+.-+.
T Consensus 168 ~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g-~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~-lyIvsE~n~ 245 (255)
T 3qqz_A 168 RQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVG-EVIGEMSLTKGSRGLSHNIKQAEGVAMDASGN-IYIVSEPNR 245 (255)
T ss_dssp HTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTC-CEEEEEECSTTGGGCSSCCCSEEEEEECTTCC-EEEEETTTE
T ss_pred cccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCC-CEEEEEEcCCccCCcccccCCCCeeEECCCCC-EEEEcCCce
Confidence 11223568899998654 555566667888899764 4444433221 13557899999997 555577776
Q ss_pred EEEEeC
Q psy4391 220 LKLWDS 225 (231)
Q Consensus 220 v~vwd~ 225 (231)
+.+|..
T Consensus 246 ~y~f~~ 251 (255)
T 3qqz_A 246 FYRFTP 251 (255)
T ss_dssp EEEEEC
T ss_pred EEEEEe
Confidence 666643
No 236
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.10 E-value=1.6e-08 Score=84.68 Aligned_cols=182 Identities=15% Similarity=0.191 Sum_probs=121.6
Q ss_pred EEEECCCCCEEEEEeCCCc-------------------EEEeecCCCcEEEEEecc--c-------ccEEEEEECCCCC-
Q psy4391 32 SVKFSPNGEWLASSSADKL-------------------IKIWGAYDGKFEKTISGH--K-------LGISDVAWSSDSR- 82 (231)
Q Consensus 32 ~~~~~~~~~~l~~~~~dg~-------------------i~i~~~~~~~~~~~~~~~--~-------~~v~~~~~~~~~~- 82 (231)
.++++|++.+++.+..++. |.-+|..+++....+... . ....-.....+|+
T Consensus 239 ~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~ 318 (689)
T 1yiq_A 239 SFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKP 318 (689)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEE
T ss_pred ceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcE
Confidence 5788898888888877763 899999999887766532 1 1111112222454
Q ss_pred --EEEEecCCCcEEEEeCCCceeeeeecCCC-c--------------------------------------ceEEEEECC
Q psy4391 83 --LLVSGSDDKTLKIWELSSGKCLKTLKGHS-N--------------------------------------YVFCCNFNP 121 (231)
Q Consensus 83 --~l~~~~~~g~i~~~d~~~~~~~~~~~~~~-~--------------------------------------~v~~~~~~~ 121 (231)
.++.++.+|.++++|.++++.+...+... . ....++++|
T Consensus 319 ~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp 398 (689)
T 1yiq_A 319 RKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNP 398 (689)
T ss_dssp EEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEET
T ss_pred EEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECC
Confidence 68889999999999999998763321100 0 001256788
Q ss_pred CCCEEEEeec---------------------------------------------CCcEEEEECCCCceeeeccCCCCCe
Q psy4391 122 QSNLIVSGSF---------------------------------------------DESVRIWDVRTGKCLKTLPAHSDPV 156 (231)
Q Consensus 122 ~~~~l~~~~~---------------------------------------------d~~i~v~d~~~~~~~~~~~~~~~~v 156 (231)
+..++++... +|.|+.||+.+++.+.....+. +.
T Consensus 399 ~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~-~~ 477 (689)
T 1yiq_A 399 DTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVT-IF 477 (689)
T ss_dssp TTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESS-SC
T ss_pred CCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCC-Cc
Confidence 8777776532 3679999999999887765443 22
Q ss_pred EEEEEcCCCCeEEEEecCCeEEEEeCCCCceeeeeecCCCCCeEEEEECCCCC-EEEEE
Q psy4391 157 SAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK-YILAA 214 (231)
Q Consensus 157 ~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~-~l~~~ 214 (231)
..-.+...+.+++.++.||.++.||.++++.+-++.........-+.|..+|+ |+++.
T Consensus 478 ~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~qyv~~~ 536 (689)
T 1yiq_A 478 NGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQYVTFM 536 (689)
T ss_dssp CCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEE
T ss_pred cCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEECCEEEEEEE
Confidence 22244556778889999999999999999988776544332222355677887 44443
No 237
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.08 E-value=1.5e-07 Score=71.50 Aligned_cols=193 Identities=11% Similarity=0.097 Sum_probs=121.0
Q ss_pred cceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEec--------------------ccccEEEEEECC-CCCEEEE
Q psy4391 28 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG--------------------HKLGISDVAWSS-DSRLLVS 86 (231)
Q Consensus 28 ~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~--------------------~~~~v~~~~~~~-~~~~l~~ 86 (231)
....+++|+++|++++++..++.|..|+..++... .+.. ....+..+++.+ +++ |+.
T Consensus 19 ~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~v 96 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LYI 96 (322)
T ss_dssp SCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EEE
T ss_pred CCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCc-EEE
Confidence 34567889999997788888899999987655433 2210 112477899997 565 444
Q ss_pred ecCCCcEEEEeCCCceeeeeec---C-CCcceEEEEECC-CCCEEEEeec-----------------CCcEEEEECCCCc
Q psy4391 87 GSDDKTLKIWELSSGKCLKTLK---G-HSNYVFCCNFNP-QSNLIVSGSF-----------------DESVRIWDVRTGK 144 (231)
Q Consensus 87 ~~~~g~i~~~d~~~~~~~~~~~---~-~~~~v~~~~~~~-~~~~l~~~~~-----------------d~~i~v~d~~~~~ 144 (231)
+...+.+..+|..+++...... . .......+.+++ +|++.++-.. ++.|..+|..+++
T Consensus 97 ~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~ 176 (322)
T 2fp8_A 97 VDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKE 176 (322)
T ss_dssp EETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTE
T ss_pred EECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCE
Confidence 5444558888877654221111 1 112467789999 8987776432 3678889987665
Q ss_pred eeeeccCCCCCeEEEEEcCCCCeEEEE-ecCCeEEEEeCCCCc--eeeeeecCCCCCeEEEEECCCCCEEEEEeC-----
Q psy4391 145 CLKTLPAHSDPVSAVHFNRDGSLIVSS-SYDGLCRIWDTASGQ--CLKTLIDDDNPPVSFVKFSPNGKYILAATL----- 216 (231)
Q Consensus 145 ~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~v~d~~~~~--~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~----- 216 (231)
...... .......++++|+++.|+.+ ...+.|.+|++.... ....+.... . ...++++++|.+.++...
T Consensus 177 ~~~~~~-~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~-g-P~gi~~d~~G~l~va~~~~~~~~ 253 (322)
T 2fp8_A 177 TTLLLK-ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIP-N-PGNIKRNADGHFWVSSSEELDGN 253 (322)
T ss_dssp EEEEEE-EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECS-S-EEEEEECTTSCEEEEEEEETTSS
T ss_pred EEEecc-CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCC-C-CCCeEECCCCCEEEEecCccccc
Confidence 322211 11234568999999866555 556899999987531 112222111 2 567899999986666544
Q ss_pred -----CCeEEEEeC
Q psy4391 217 -----DNTLKLWDS 225 (231)
Q Consensus 217 -----d~~v~vwd~ 225 (231)
.+.|..+|.
T Consensus 254 ~~~~~~~~v~~~d~ 267 (322)
T 2fp8_A 254 MHGRVDPKGIKFDE 267 (322)
T ss_dssp TTSCEEEEEEEECT
T ss_pred ccCCCccEEEEECC
Confidence 356777774
No 238
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.06 E-value=3.8e-11 Score=93.31 Aligned_cols=173 Identities=17% Similarity=0.165 Sum_probs=88.9
Q ss_pred ceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEeccccc-EE-EEEECCCCCEEEEecCCCcEEEEeCCCceeeee
Q psy4391 29 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG-IS-DVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKT 106 (231)
Q Consensus 29 ~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~-v~-~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~ 106 (231)
.+.+..+..++..+++++.||.++.||..+++....+..+... +. ..... ++..+++++.++.++.||.++++....
T Consensus 39 ~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~ 117 (369)
T 2hz6_A 39 PVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQT 117 (369)
T ss_dssp CSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCSCC------CCCCEEEEEEEEECCC-------
T ss_pred CceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEE
Confidence 3444445566777777789999999999887765554322111 10 01111 345677888899999999999987766
Q ss_pred ecCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeeccCCCCCeEEEEEcCCC---CeEEEEecCCeEEEEeCC
Q psy4391 107 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDG---SLIVSSSYDGLCRIWDTA 183 (231)
Q Consensus 107 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~dg~i~v~d~~ 183 (231)
+..+. ....+|++..+++++.++.|+.||.++|+.+..+.... .....+.++. ..+++++.+|.+..||..
T Consensus 118 ~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~ 191 (369)
T 2hz6_A 118 LSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSE 191 (369)
T ss_dssp -------------------EEEEEEEEEEECCCSSSSSCCCEEEEEE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTT
T ss_pred ecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEeccc--ccCccccCCccccceEEEECCCCEEEEEECC
Confidence 65432 12455688899999999999999999998766554221 1122333332 567778899999999999
Q ss_pred CCceeeeeecCCCCCeEEEEECCCCC
Q psy4391 184 SGQCLKTLIDDDNPPVSFVKFSPNGK 209 (231)
Q Consensus 184 ~~~~~~~~~~~~~~~i~~~~~s~~g~ 209 (231)
+++.+-+.. ...+.+....++++|.
T Consensus 192 tG~~~W~~~-~~~pv~~~~~~~~dg~ 216 (369)
T 2hz6_A 192 SGDVLWIQN-YASPVVAFYVWQREGL 216 (369)
T ss_dssp TCCEEEEEE-CSSCEEEEEECTTSSC
T ss_pred CCcEEEEec-CCCceEEEEEecCCce
Confidence 998654433 1222233345566664
No 239
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.06 E-value=3.4e-08 Score=74.98 Aligned_cols=186 Identities=13% Similarity=0.044 Sum_probs=121.0
Q ss_pred cceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEecCCCcEEEEeCCCceeeeee
Q psy4391 28 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTL 107 (231)
Q Consensus 28 ~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~ 107 (231)
..+.++...+++. +..++.++.+..++.. ++...........+..+...+++..++. + +.+..+| .+++.....
T Consensus 137 ~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v~-t--~~l~~~d-~~g~~~~~~ 210 (330)
T 3hxj_A 137 AIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYFG-S--DKVYAIN-PDGTEKWNF 210 (330)
T ss_dssp CCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEEE-S--SSEEEEC-TTSCEEEEE
T ss_pred ceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEEE-e--CEEEEEC-CCCcEEEEE
Confidence 3455666666776 4556778999999987 6665555544444556677777775544 4 7889999 666655555
Q ss_pred cCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeEEEEecCCeEEEEeCCCCce
Q psy4391 108 KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC 187 (231)
Q Consensus 108 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~ 187 (231)
......+.++...+++.+ ..++.++.+..+|. ++..+..+......+..+.+.+++ .+..++.+|.+..+|. +++.
T Consensus 211 ~~~~~~~~~~~~~~~g~l-~v~t~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d~-~g~~ 286 (330)
T 3hxj_A 211 YAGYWTVTRPAISEDGTI-YVTSLDGHLYAINP-DGTEKWRFKTGKRIESSPVIGNTD-TIYFGSYDGHLYAINP-DGTE 286 (330)
T ss_dssp CCSSCCCSCCEECTTSCE-EEEETTTEEEEECT-TSCEEEEEECSSCCCSCCEECTTS-CEEEECTTCEEEEECT-TSCE
T ss_pred ccCCcceeceEECCCCeE-EEEcCCCeEEEECC-CCCEeEEeeCCCCccccceEcCCC-eEEEecCCCCEEEECC-CCcE
Confidence 444445666677777654 44666778888874 455555554443334445565555 4667778888999996 5665
Q ss_pred eeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeC
Q psy4391 188 LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225 (231)
Q Consensus 188 ~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~ 225 (231)
...... ....+.++..+++|+ |.+++.+|.+++...
T Consensus 287 ~~~~~~-~~~~~~~~~~d~~g~-l~~gt~~G~~~~~~~ 322 (330)
T 3hxj_A 287 KWNFET-GSWIIATPVIDENGT-IYFGTRNGKFYALFN 322 (330)
T ss_dssp EEEEEC-SSCCCSCCEECTTCC-EEEECTTSCEEEEEC
T ss_pred EEEEEc-CCccccceEEcCCCE-EEEEcCCCeEEEEec
Confidence 444432 233455667778876 566888999998875
No 240
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.02 E-value=2.3e-08 Score=83.64 Aligned_cols=178 Identities=12% Similarity=0.176 Sum_probs=121.6
Q ss_pred CCcEEEeecCCCcEEEEEeccccc--------------------------------EEEEEECCCCCEEEEecCCC----
Q psy4391 48 DKLIKIWGAYDGKFEKTISGHKLG--------------------------------ISDVAWSSDSRLLVSGSDDK---- 91 (231)
Q Consensus 48 dg~i~i~~~~~~~~~~~~~~~~~~--------------------------------v~~~~~~~~~~~l~~~~~~g---- 91 (231)
+|.|+.+|..+++....+...... ...++++|++..++.+..++
T Consensus 189 ~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~ 268 (677)
T 1kb0_A 189 RGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWS 268 (677)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSC
T ss_pred CCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCcccc
Confidence 689999999999887766431110 12467888888888777654
Q ss_pred ---------------cEEEEeCCCceeeeeecC--CC-------cceEEEEECCCC---CEEEEeecCCcEEEEECCCCc
Q psy4391 92 ---------------TLKIWELSSGKCLKTLKG--HS-------NYVFCCNFNPQS---NLIVSGSFDESVRIWDVRTGK 144 (231)
Q Consensus 92 ---------------~i~~~d~~~~~~~~~~~~--~~-------~~v~~~~~~~~~---~~l~~~~~d~~i~v~d~~~~~ 144 (231)
.|..+|.++++..-.++. +. ..........+| ..++.++.+|.++++|.++|+
T Consensus 269 ~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~ 348 (677)
T 1kb0_A 269 HKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGK 348 (677)
T ss_dssp HHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCC
T ss_pred CCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCC
Confidence 499999999987765542 11 112222333466 678999999999999999998
Q ss_pred eeeeccCCC-----------CCe------------------------EEEEEcCCCCeEEEEec----------------
Q psy4391 145 CLKTLPAHS-----------DPV------------------------SAVHFNRDGSLIVSSSY---------------- 173 (231)
Q Consensus 145 ~~~~~~~~~-----------~~v------------------------~~~~~~~~~~~l~~~~~---------------- 173 (231)
.+....... .++ ..++++|+..++++...
T Consensus 349 ~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~ 428 (677)
T 1kb0_A 349 FISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQ 428 (677)
T ss_dssp EEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTC
T ss_pred EeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeeccccccccc
Confidence 876543211 011 14688898888877543
Q ss_pred ---------------------------CCeEEEEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCC
Q psy4391 174 ---------------------------DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSY 226 (231)
Q Consensus 174 ---------------------------dg~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~~ 226 (231)
.|.|..||+.+++.+-+..... +.....+..++..++.++.||.+++||..
T Consensus 429 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~--~~~~g~~~~~g~~v~~g~~dg~l~a~D~~ 506 (677)
T 1kb0_A 429 AGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVS--PWNGGTLTTAGNVVFQGTADGRLVAYHAA 506 (677)
T ss_dssp CCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESS--SCCCCEEEETTTEEEEECTTSEEEEEETT
T ss_pred ccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCCC--CCcCcceEeCCCEEEEECCCCcEEEEECC
Confidence 1789999999998765554322 22233455677888889999999999974
Q ss_pred C
Q psy4391 227 P 227 (231)
Q Consensus 227 ~ 227 (231)
.
T Consensus 507 t 507 (677)
T 1kb0_A 507 T 507 (677)
T ss_dssp T
T ss_pred C
Confidence 3
No 241
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.02 E-value=1.5e-06 Score=65.54 Aligned_cols=192 Identities=12% Similarity=0.107 Sum_probs=116.5
Q ss_pred cceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEecCCC--cEEEEeCCCceeee
Q psy4391 28 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDK--TLKIWELSSGKCLK 105 (231)
Q Consensus 28 ~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g--~i~~~d~~~~~~~~ 105 (231)
.....++|+++|+++++-..++.|..|+... .....+. .......+++.++++.+++..... .|..++..+++...
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g-~~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~ 109 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDG-NQQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVET 109 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTC-CEEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCC-ceEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEE
Confidence 4577899999999777766788999998754 3333332 234578899999998665553322 46667777766433
Q ss_pred eecC-CCcceEEEEECCCCCEEEEeecCCcEEEEECCCCce-eee--------c-cCCCCCeEEEEEcCCCCeEEEE-ec
Q psy4391 106 TLKG-HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC-LKT--------L-PAHSDPVSAVHFNRDGSLIVSS-SY 173 (231)
Q Consensus 106 ~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~-~~~--------~-~~~~~~v~~~~~~~~~~~l~~~-~~ 173 (231)
.... .......++..+++..+++-..++.|+++|...++. +.. . ...-.....+ +|+++.|+.+ ..
T Consensus 110 ~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~ 187 (306)
T 2p4o_A 110 LLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTE 187 (306)
T ss_dssp EEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETT
T ss_pred EEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCC
Confidence 2221 112233444455555555555688999999875421 110 0 0111233445 7888766554 45
Q ss_pred CCeEEEEeCCC-Cce--eeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeC
Q psy4391 174 DGLCRIWDTAS-GQC--LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225 (231)
Q Consensus 174 dg~i~v~d~~~-~~~--~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~ 225 (231)
.+.|..+++.. ++. ...+... .....++++++|+++++....++|.++|.
T Consensus 188 ~~~I~~~~~~~~g~~~~~~~~~~~--~~P~gi~vd~dG~l~va~~~~~~V~~~~~ 240 (306)
T 2p4o_A 188 KMLLLRIPVDSTDKPGEPEIFVEQ--TNIDDFAFDVEGNLYGATHIYNSVVRIAP 240 (306)
T ss_dssp TTEEEEEEBCTTSCBCCCEEEEES--CCCSSEEEBTTCCEEEECBTTCCEEEECT
T ss_pred CCEEEEEEeCCCCCCCccEEEecc--CCCCCeEECCCCCEEEEeCCCCeEEEECC
Confidence 67999999864 321 1111111 12245789999987776666789999985
No 242
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=99.02 E-value=7.3e-08 Score=81.62 Aligned_cols=191 Identities=15% Similarity=0.171 Sum_probs=109.3
Q ss_pred ceEEEEEC-CCCCEEEEEe-CCC----cEEEeecCCC-cEEE-EEecccccEEEEEECCCCCEEEEecCC-----CcEEE
Q psy4391 29 AVSSVKFS-PNGEWLASSS-ADK----LIKIWGAYDG-KFEK-TISGHKLGISDVAWSSDSRLLVSGSDD-----KTLKI 95 (231)
Q Consensus 29 ~i~~~~~~-~~~~~l~~~~-~dg----~i~i~~~~~~-~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~~-----g~i~~ 95 (231)
.+....|| |||++||.+. .+| .|+++++.++ +... .+. .....++|+||++.|+....+ ..|++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence 67889999 9999887543 333 4999999877 5211 111 113457899999888776654 25788
Q ss_pred EeCCCcee--eeeec-CCCcceEEEEECCCCCEEEEeec---CCcEEEEECCCCc-ee--eec-cCCCCCeEEEEEcCCC
Q psy4391 96 WELSSGKC--LKTLK-GHSNYVFCCNFNPQSNLIVSGSF---DESVRIWDVRTGK-CL--KTL-PAHSDPVSAVHFNRDG 165 (231)
Q Consensus 96 ~d~~~~~~--~~~~~-~~~~~v~~~~~~~~~~~l~~~~~---d~~i~v~d~~~~~-~~--~~~-~~~~~~v~~~~~~~~~ 165 (231)
+++.+++. ...+. ........+.|+|+|++|+.... ...|+++|+.++. .. ..+ ....+....+.|+..+
T Consensus 252 ~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~ 331 (751)
T 2xe4_A 252 HVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTS 331 (751)
T ss_dssp EETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTT
T ss_pred EECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCC
Confidence 88876532 22222 22234567889999998887653 3458889998752 12 333 2233455555554434
Q ss_pred CeEEEEecC----CeEEEEeCCCCceeee-eecCC-CCCeEEEEECCCCCEEEEEeCCCeEEEE
Q psy4391 166 SLIVSSSYD----GLCRIWDTASGQCLKT-LIDDD-NPPVSFVKFSPNGKYILAATLDNTLKLW 223 (231)
Q Consensus 166 ~~l~~~~~d----g~i~v~d~~~~~~~~~-~~~~~-~~~i~~~~~s~~g~~l~~~s~d~~v~vw 223 (231)
.+++....+ ..|..+|+.+...... +.... ...+..+.+. .+.++++...++..++|
T Consensus 332 ~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~ 394 (751)
T 2xe4_A 332 HLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-SNYLVVAGRRAGLTRIW 394 (751)
T ss_dssp EEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC-SSEEEEEEEETTEEEEE
T ss_pred EEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEE
Confidence 444444443 3677778765322222 22222 2233444444 23344555567754443
No 243
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.99 E-value=2.8e-08 Score=80.49 Aligned_cols=186 Identities=11% Similarity=0.126 Sum_probs=123.2
Q ss_pred cceEEEEE-C-CCCCEEEEEe------------------CCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEe
Q psy4391 28 KAVSSVKF-S-PNGEWLASSS------------------ADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSG 87 (231)
Q Consensus 28 ~~i~~~~~-~-~~~~~l~~~~------------------~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 87 (231)
.....+++ + |+++++++++ .++.+.+.|..+.+...++.-.. ....++.+|+|++++++
T Consensus 134 ~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt 212 (595)
T 1fwx_A 134 KGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFST 212 (595)
T ss_dssp CSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEE
T ss_pred CCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEE
Confidence 45678887 5 8999988874 24578899998887777765322 34567889999998877
Q ss_pred cCCC--------------------------------------cEEEEeCCC--cee-eeeecCCCcceEEEEECCCCCEE
Q psy4391 88 SDDK--------------------------------------TLKIWELSS--GKC-LKTLKGHSNYVFCCNFNPQSNLI 126 (231)
Q Consensus 88 ~~~g--------------------------------------~i~~~d~~~--~~~-~~~~~~~~~~v~~~~~~~~~~~l 126 (231)
+.+. .|.+.|..+ ++. +..+... ....++.++|||+++
T Consensus 213 ~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg-~~PhGv~~sPDGk~v 291 (595)
T 1fwx_A 213 SYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIA-NNPHGCNMAPDKKHL 291 (595)
T ss_dssp ESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEEE-SSCCCEEECTTSSEE
T ss_pred ecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEecC-CCceEEEEcCCCCEE
Confidence 6443 356666665 333 3333321 234468899999987
Q ss_pred EEee-cCCcEEEEECCCCc------------eeeeccCCCCCeEEEEEcCCCCeEEEEecCCeEEEEeCCC---------
Q psy4391 127 VSGS-FDESVRIWDVRTGK------------CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS--------- 184 (231)
Q Consensus 127 ~~~~-~d~~i~v~d~~~~~------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~--------- 184 (231)
+..+ .+.+|.++|+.+.+ ....... ......++|+|+|..+.+...|++|.+||+..
T Consensus 292 ~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~v-G~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~ 370 (595)
T 1fwx_A 292 CVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPEL-GLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEK 370 (595)
T ss_dssp EEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBC-CSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCS
T ss_pred EEeCCCCCeEEEEECcccccccccccCcccceEEEcCC-CCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccc
Confidence 7665 67889999998653 2333333 34578899999994444566789999999876
Q ss_pred -CceeeeeecCCCCC-eE---EEEECCCCCEEEEEeC
Q psy4391 185 -GQCLKTLIDDDNPP-VS---FVKFSPNGKYILAATL 216 (231)
Q Consensus 185 -~~~~~~~~~~~~~~-i~---~~~~s~~g~~l~~~s~ 216 (231)
.+.+.++..+..+. .. .+.++|||++|++...
T Consensus 371 ~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk 407 (595)
T 1fwx_A 371 VDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSK 407 (595)
T ss_dssp CCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEES
T ss_pred cceeEEEeecccccccceeccceEeCCCCCEEEEcCC
Confidence 33444443332210 11 1245899999998764
No 244
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.97 E-value=9.5e-08 Score=80.12 Aligned_cols=178 Identities=12% Similarity=0.138 Sum_probs=118.5
Q ss_pred CCcEEEeecCCCcEEEEEeccc------------------------------cc-EEEEEECCCCCEEEEecCCCc----
Q psy4391 48 DKLIKIWGAYDGKFEKTISGHK------------------------------LG-ISDVAWSSDSRLLVSGSDDKT---- 92 (231)
Q Consensus 48 dg~i~i~~~~~~~~~~~~~~~~------------------------------~~-v~~~~~~~~~~~l~~~~~~g~---- 92 (231)
+|.|+.||..+++....+.... .. -..++++|++..++.+..++.
T Consensus 182 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~ 261 (689)
T 1yiq_A 182 RGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDP 261 (689)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCH
T ss_pred CCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCcccc
Confidence 6889999999998876654210 00 114678888888888877753
Q ss_pred ---------------EEEEeCCCceeeeeecC--CC-------cceEEEEECCCCC---EEEEeecCCcEEEEECCCCce
Q psy4391 93 ---------------LKIWELSSGKCLKTLKG--HS-------NYVFCCNFNPQSN---LIVSGSFDESVRIWDVRTGKC 145 (231)
Q Consensus 93 ---------------i~~~d~~~~~~~~~~~~--~~-------~~v~~~~~~~~~~---~l~~~~~d~~i~v~d~~~~~~ 145 (231)
|..+|.++++.+-.++. +. ..........+|+ .++.++.+|.++++|.++|+.
T Consensus 262 ~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~ 341 (689)
T 1yiq_A 262 KWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGEL 341 (689)
T ss_dssp HHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCE
T ss_pred CCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCE
Confidence 99999999987766543 11 1121222223454 788899999999999999987
Q ss_pred eeeccCCC----------------------------C-----------CeEEEEEcCCCCeEEEEec-------------
Q psy4391 146 LKTLPAHS----------------------------D-----------PVSAVHFNRDGSLIVSSSY------------- 173 (231)
Q Consensus 146 ~~~~~~~~----------------------------~-----------~v~~~~~~~~~~~l~~~~~------------- 173 (231)
+....... . .-..++++|+..++++...
T Consensus 342 l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~ 421 (689)
T 1yiq_A 342 LSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAP 421 (689)
T ss_dssp EEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCC
T ss_pred eccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccc
Confidence 63321110 0 0112678888777776532
Q ss_pred --------------------------------CCeEEEEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEE
Q psy4391 174 --------------------------------DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLK 221 (231)
Q Consensus 174 --------------------------------dg~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~ 221 (231)
+|.|..||+.+++.+-+..... +...-.+...|.+++.++.||.++
T Consensus 422 ~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~--~~~~g~~~tagglvf~gt~dg~l~ 499 (689)
T 1yiq_A 422 KRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVT--IFNGGTLSTAGNLVFEGSADGRVI 499 (689)
T ss_dssp CCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESS--SCCCCEEEETTTEEEEECTTSEEE
T ss_pred cccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCC--CccCccceECCCEEEEECCCCcEE
Confidence 3779999999998765554332 122223455677899999999999
Q ss_pred EEeCCC
Q psy4391 222 LWDSYP 227 (231)
Q Consensus 222 vwd~~~ 227 (231)
.||...
T Consensus 500 a~D~~t 505 (689)
T 1yiq_A 500 AYAADT 505 (689)
T ss_dssp EEETTT
T ss_pred EEECCC
Confidence 999754
No 245
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.97 E-value=9e-08 Score=72.64 Aligned_cols=176 Identities=16% Similarity=0.088 Sum_probs=116.0
Q ss_pred CCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEecCCCcEEEEeCCCceeeeeecCCCcceEEEE
Q psy4391 39 GEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCN 118 (231)
Q Consensus 39 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~ 118 (231)
+..+..++.++.+..++.. ++...........+..+...+++. +..++.++.+..+|.. ++...........+.++.
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~ 183 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAAS 183 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCE
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeE
Confidence 4556677788999999987 665555444333445556666666 5567778899999998 665555544444455566
Q ss_pred ECCCCCEEEEeecCCcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeEEEEecCCeEEEEeCCCCceeeeeecCCCCC
Q psy4391 119 FNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 198 (231)
Q Consensus 119 ~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~ 198 (231)
..+++.+.+.. +.+..+| .+++...........+.++...+++. +..++.++.+..+|. +++.+...... ...
T Consensus 184 ~d~~g~l~v~t---~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~-~g~~~~~~~~~-~~~ 256 (330)
T 3hxj_A 184 IGKDGTIYFGS---DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINP-DGTEKWRFKTG-KRI 256 (330)
T ss_dssp ECTTCCEEEES---SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEECT-TSCEEEEEECS-SCC
T ss_pred EcCCCEEEEEe---CEEEEEC-CCCcEEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEECC-CCCEeEEeeCC-CCc
Confidence 77777766544 7899999 67776666655556677788888775 555666788888875 44444433322 222
Q ss_pred eEEEEECCCCCEEEEEeCCCeEEEEeC
Q psy4391 199 VSFVKFSPNGKYILAATLDNTLKLWDS 225 (231)
Q Consensus 199 i~~~~~s~~g~~l~~~s~d~~v~vwd~ 225 (231)
+..+.+.++| .|.+++.+|.|..+|.
T Consensus 257 ~~~~~~~~~g-~l~v~t~~ggl~~~d~ 282 (330)
T 3hxj_A 257 ESSPVIGNTD-TIYFGSYDGHLYAINP 282 (330)
T ss_dssp CSCCEECTTS-CEEEECTTCEEEEECT
T ss_pred cccceEcCCC-eEEEecCCCCEEEECC
Confidence 2334556666 4667777888888885
No 246
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.95 E-value=1e-06 Score=66.90 Aligned_cols=192 Identities=12% Similarity=0.092 Sum_probs=117.4
Q ss_pred ceEEEEECC-CCCEEEEEeCCCcEEEeecCCCcEEEEEec-----ccccEEEEEECC-CCCEEEEecC------------
Q psy4391 29 AVSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTISG-----HKLGISDVAWSS-DSRLLVSGSD------------ 89 (231)
Q Consensus 29 ~i~~~~~~~-~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~-----~~~~v~~~~~~~-~~~~l~~~~~------------ 89 (231)
....+++.+ +|++ +.+...+.+..++..++.. ..+.. ......++++.+ +|+.+++...
T Consensus 81 ~p~gi~~~~~~g~l-~v~d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~ 158 (322)
T 2fp8_A 81 RTYDISYNLQNNQL-YIVDCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIM 158 (322)
T ss_dssp CEEEEEEETTTTEE-EEEETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHH
T ss_pred CCceEEEcCCCCcE-EEEECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceeh
Confidence 467899997 5554 4444455578887654432 22221 112467899999 8987665432
Q ss_pred -----CCcEEEEeCCCceeeeeecCCCcceEEEEECCCCCEEEEe-ecCCcEEEEECCCCc--eeeeccCCCCCeEEEEE
Q psy4391 90 -----DKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG-SFDESVRIWDVRTGK--CLKTLPAHSDPVSAVHF 161 (231)
Q Consensus 90 -----~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~v~d~~~~~--~~~~~~~~~~~v~~~~~ 161 (231)
++.|..+|..+++....... ......++++|+++.++.+ ...+.|.+|++.... ....+....+ ...+++
T Consensus 159 ~~~~~~g~v~~~d~~~~~~~~~~~~-~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~ 236 (322)
T 2fp8_A 159 DTSDKTGRLIKYDPSTKETTLLLKE-LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKR 236 (322)
T ss_dssp HHTCCCEEEEEEETTTTEEEEEEEE-ESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEE
T ss_pred cccCCCceEEEEeCCCCEEEEeccC-CccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEE
Confidence 36788888876654322221 1223468899999866555 556889999987531 1111111223 778999
Q ss_pred cCCCCeEEEEec----------CCeEEEEeCCCCceeeeeecCCC---CCeEEEEECCCCCEEEEEeCCCeEEEEeCC
Q psy4391 162 NRDGSLIVSSSY----------DGLCRIWDTASGQCLKTLIDDDN---PPVSFVKFSPNGKYILAATLDNTLKLWDSY 226 (231)
Q Consensus 162 ~~~~~~l~~~~~----------dg~i~v~d~~~~~~~~~~~~~~~---~~i~~~~~s~~g~~l~~~s~d~~v~vwd~~ 226 (231)
+++|.++++... .+.|..+|.. ++.+..+..... ..+..+++ .+|+++++...++.|.+++..
T Consensus 237 d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~ 312 (322)
T 2fp8_A 237 NADGHFWVSSSEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYD 312 (322)
T ss_dssp CTTSCEEEEEEEETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC-
T ss_pred CCCCCEEEEecCcccccccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEecc
Confidence 999987666544 4678888874 665555543321 23455555 456655555567899999864
No 247
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.93 E-value=4.3e-07 Score=70.43 Aligned_cols=179 Identities=13% Similarity=0.016 Sum_probs=115.0
Q ss_pred CCEEEEEeCCCcEEEeecCCCcEEEEEecccc-c---EE---EEEECC--CCCEEEEecCCCcEEEEeCCCceeeeeecC
Q psy4391 39 GEWLASSSADKLIKIWGAYDGKFEKTISGHKL-G---IS---DVAWSS--DSRLLVSGSDDKTLKIWELSSGKCLKTLKG 109 (231)
Q Consensus 39 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~-~---v~---~~~~~~--~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~ 109 (231)
+..++.+..++.+..+|..+++.......... . +. .+.-.| .+..++.++.++.+..+|.++++.......
T Consensus 188 ~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~ 267 (376)
T 3q7m_A 188 FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKREL 267 (376)
T ss_dssp TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECC
T ss_pred CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccC
Confidence 34567777889999999988887665542210 0 00 011111 245677788899999999999887655442
Q ss_pred CCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeeccCC-CCCeEEEEEcCCCCeEEEEecCCeEEEEeCCCCcee
Q psy4391 110 HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAH-SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCL 188 (231)
Q Consensus 110 ~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~ 188 (231)
. ....+.. ++..++.++.++.+..+|..+++........ ......... .+..++.++.+|.+..+|..+++.+
T Consensus 268 ~--~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~~~ 341 (376)
T 3q7m_A 268 G--SVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL--YNGNLVVGDSEGYLHWINVEDGRFV 341 (376)
T ss_dssp C--CEEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEE
T ss_pred C--CCCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEE--ECCEEEEEeCCCeEEEEECCCCcEE
Confidence 2 2333333 3667888888999999999999877665421 122222222 2567888889999999999999876
Q ss_pred eeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeC
Q psy4391 189 KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225 (231)
Q Consensus 189 ~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~ 225 (231)
................ .+..|++++.+|.|..||.
T Consensus 342 ~~~~~~~~~~~~~~~~--~~~~l~v~~~~G~l~~~~~ 376 (376)
T 3q7m_A 342 AQQKVDSSGFQTEPVA--ADGKLLIQAKDGTVYSITR 376 (376)
T ss_dssp EEEECCTTCBCSCCEE--ETTEEEEEBTTSCEEEEEC
T ss_pred EEEecCCCcceeCCEE--ECCEEEEEeCCCEEEEEeC
Confidence 6554322211111122 2457888899999999873
No 248
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.90 E-value=8.6e-07 Score=65.22 Aligned_cols=150 Identities=13% Similarity=0.098 Sum_probs=103.5
Q ss_pred EEEEEECCCCCEEEEecC--CCcEEEEeCCCceeeeeecCCCc-ceEEEEECCCCCEEEEe-ecCCcEEEEECCCCceee
Q psy4391 72 ISDVAWSSDSRLLVSGSD--DKTLKIWELSSGKCLKTLKGHSN-YVFCCNFNPQSNLIVSG-SFDESVRIWDVRTGKCLK 147 (231)
Q Consensus 72 v~~~~~~~~~~~l~~~~~--~g~i~~~d~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~-~~d~~i~v~d~~~~~~~~ 147 (231)
...+.|++++..+++.+. ++.|+++|+++++.+..+..... ....+.+. +..++.. -.++.+.++|..+.+.+.
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v~~ 100 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSNIK 100 (266)
T ss_dssp EEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEEEE
T ss_pred cccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcEEE
Confidence 578999998754455443 57999999999998877653221 22234444 4445444 567899999999998888
Q ss_pred eccCC-CCCeEEEEEcCCCCeEEEEecCCeEEEEeCCCCceeeeeecCCC----CCeEEEEECCCCCEEEEEeCCCeEEE
Q psy4391 148 TLPAH-SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN----PPVSFVKFSPNGKYILAATLDNTLKL 222 (231)
Q Consensus 148 ~~~~~-~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~----~~i~~~~~s~~g~~l~~~s~d~~v~v 222 (231)
.+... ... ..+++|++.++++..++.+.++|..+.+.+..+..... ...+.+.|. +|+..+..-.++.|.+
T Consensus 101 ~i~~g~~~g---~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~v 176 (266)
T 2iwa_A 101 NFTHQMKDG---WGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIAR 176 (266)
T ss_dssp EEECCSSSC---CEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEE
T ss_pred EEECCCCCe---EEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEE
Confidence 87643 222 33566888887777788999999999888777654321 124667777 6755555545789999
Q ss_pred EeCCC
Q psy4391 223 WDSYP 227 (231)
Q Consensus 223 wd~~~ 227 (231)
.|...
T Consensus 177 ID~~t 181 (266)
T 2iwa_A 177 ISAKD 181 (266)
T ss_dssp EETTT
T ss_pred EECCC
Confidence 99744
No 249
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.87 E-value=1e-06 Score=68.34 Aligned_cols=183 Identities=15% Similarity=0.067 Sum_probs=110.3
Q ss_pred CCCEEEEEeCCCcEEEeecCCCcEEEEEecc---------cccEEEEEECCCCCEEEEecCCCcEEEEeCCCceeeeeec
Q psy4391 38 NGEWLASSSADKLIKIWGAYDGKFEKTISGH---------KLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLK 108 (231)
Q Consensus 38 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~---------~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~ 108 (231)
.+..+++++.++.|..+|..+++........ ...+.. ....++..+++++.++.|..+|.++++......
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~ 130 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSG-GVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTK 130 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEE-EEEEETTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCccccc-CceEeCCEEEEEcCCCEEEEEECCCCCEEEEEe
Confidence 4667788888999999999888876555432 112222 112245677788889999999999988765554
Q ss_pred CCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeeccCCCCCe-----EEEEEcCCCCeEEEEecCCeEEEEeCC
Q psy4391 109 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPV-----SAVHFNRDGSLIVSSSYDGLCRIWDTA 183 (231)
Q Consensus 109 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v-----~~~~~~~~~~~l~~~~~dg~i~v~d~~ 183 (231)
........... .+..++.++.++.+..+|.++++.+.......... ...... +..++.++.++.+..+|..
T Consensus 131 ~~~~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~~ 206 (376)
T 3q7m_A 131 VAGEALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSAVLME 206 (376)
T ss_dssp CSSCCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEECCTTTEEEEEETT
T ss_pred CCCceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEEEEECC
Confidence 32211111111 24577778889999999999998877655432111 111222 4567778889999999999
Q ss_pred CCceeeeeecCCCCC---eEE---EEECC--CCCEEEEEeCCCeEEEEeC
Q psy4391 184 SGQCLKTLIDDDNPP---VSF---VKFSP--NGKYILAATLDNTLKLWDS 225 (231)
Q Consensus 184 ~~~~~~~~~~~~~~~---i~~---~~~s~--~g~~l~~~s~d~~v~vwd~ 225 (231)
+++.+-......... +.. +...| .+..+++++.++.+..+|.
T Consensus 207 tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~ 256 (376)
T 3q7m_A 207 QGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDL 256 (376)
T ss_dssp TCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEET
T ss_pred CCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEEC
Confidence 887654433211000 000 00011 1345666666777777765
No 250
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.86 E-value=6.9e-06 Score=63.18 Aligned_cols=194 Identities=9% Similarity=-0.029 Sum_probs=118.1
Q ss_pred ceEEEEECCCCCEEEEE-eCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEE-EEecCCCcEEEEeCCCceeeee
Q psy4391 29 AVSSVKFSPNGEWLASS-SADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLL-VSGSDDKTLKIWELSSGKCLKT 106 (231)
Q Consensus 29 ~i~~~~~~~~~~~l~~~-~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~~g~i~~~d~~~~~~~~~ 106 (231)
....++|++.+..|+.+ ...+.|..++.........+.........+++.+.+..| ++-...+.|.+.+++.......
T Consensus 74 ~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l 153 (349)
T 3v64_C 74 NAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVL 153 (349)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred ceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEE
Confidence 45788998766655544 456788888876554444443333345678888755555 5555677899999876543333
Q ss_pred ecCCCcceEEEEECCCCCEEEEee-cC-CcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeEEEE-ecCCeEEEEeCC
Q psy4391 107 LKGHSNYVFCCNFNPQSNLIVSGS-FD-ESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSS-SYDGLCRIWDTA 183 (231)
Q Consensus 107 ~~~~~~~v~~~~~~~~~~~l~~~~-~d-~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~v~d~~ 183 (231)
+.........++++|.+..|+... .. +.|..+++............-.....++++|++..|+.+ ...+.|..+|+.
T Consensus 154 ~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~d 233 (349)
T 3v64_C 154 LWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLD 233 (349)
T ss_dssp ECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred EeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCC
Confidence 333345577899998666555444 44 778888887443222222233457889999876666554 456789999987
Q ss_pred CCceeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEe
Q psy4391 184 SGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224 (231)
Q Consensus 184 ~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd 224 (231)
... ...+..........+++. .+..+++-...+.|..+|
T Consensus 234 G~~-~~~~~~~~~~~P~giav~-~~~ly~td~~~~~V~~~~ 272 (349)
T 3v64_C 234 GSH-RKAVISQGLPHPFAITVF-EDSLYWTDWHTKSINSAN 272 (349)
T ss_dssp SCS-CEEEECSSCSSEEEEEEE-TTEEEEEETTTTEEEEEE
T ss_pred CCc-eEEEEeCCCCCceEEEEE-CCEEEEecCCCCeEEEEE
Confidence 533 233332222334567773 344444444567787776
No 251
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.80 E-value=9.7e-06 Score=63.27 Aligned_cols=196 Identities=9% Similarity=-0.030 Sum_probs=119.6
Q ss_pred cceEEEEECCCCCEEEE-EeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEE-EEecCCCcEEEEeCCCceeee
Q psy4391 28 KAVSSVKFSPNGEWLAS-SSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLL-VSGSDDKTLKIWELSSGKCLK 105 (231)
Q Consensus 28 ~~i~~~~~~~~~~~l~~-~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~~g~i~~~d~~~~~~~~ 105 (231)
.....++|++.+..|+. -...+.|..++.........+.........+++.+.+..| ++-...+.|.+.+++......
T Consensus 116 ~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~ 195 (386)
T 3v65_B 116 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKV 195 (386)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEE
T ss_pred CccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEE
Confidence 34678999876665554 4456788888876554444443333345678888755555 455556788888887544333
Q ss_pred eecCCCcceEEEEECCCCCEEEEee-cC-CcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeEEEE-ecCCeEEEEeC
Q psy4391 106 TLKGHSNYVFCCNFNPQSNLIVSGS-FD-ESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSS-SYDGLCRIWDT 182 (231)
Q Consensus 106 ~~~~~~~~v~~~~~~~~~~~l~~~~-~d-~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~v~d~ 182 (231)
.+.........++++|.+..|+... .. +.|..+++............-.....++++|++..|+.+ +..+.|..+|+
T Consensus 196 l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~ 275 (386)
T 3v65_B 196 LLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANL 275 (386)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECT
T ss_pred eecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeC
Confidence 3333335577899998776665554 34 678888887543322222333457889999876666544 45678999998
Q ss_pred CCCceeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeC
Q psy4391 183 ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225 (231)
Q Consensus 183 ~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~ 225 (231)
.... ...+..........+++. .+..+++-...+.|..+|.
T Consensus 276 dG~~-~~~~~~~~~~~P~giav~-~~~ly~td~~~~~V~~~~~ 316 (386)
T 3v65_B 276 DGSH-RKAVISQGLPHPFAITVF-EDSLYWTDWHTKSINSANK 316 (386)
T ss_dssp TSCS-CEEEECSSCSSEEEEEEE-TTEEEEEETTTTEEEEEET
T ss_pred CCCe-eEEEEECCCCCceEEEEE-CCEEEEeeCCCCeEEEEEC
Confidence 6533 233333222334567773 3444444445678888873
No 252
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.76 E-value=8e-07 Score=64.90 Aligned_cols=149 Identities=9% Similarity=-0.015 Sum_probs=101.2
Q ss_pred EEEEEECCCCCEEEEecCCCcEEEEeCCCceeeeeecCCCcc-eEEEEECCCCCEEEEeecCCcEEEEECCCCceeeecc
Q psy4391 72 ISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNY-VFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLP 150 (231)
Q Consensus 72 v~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 150 (231)
...+.|+ ++..+.+.+.+|.|+.+|+++++.+..+ -.... -..+.... +++......++.+.+||.++.+.+..+.
T Consensus 57 tqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g-~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~ 133 (268)
T 3nok_A 57 TQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDG-ERLYQLTWTEGLLFTWSGMPPQRERTTR 133 (268)
T ss_dssp EEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECS-SCEEEEESSSCEEEEEETTTTEEEEEEE
T ss_pred cceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeC-CEEEEEEccCCEEEEEECCcCcEEEEEe
Confidence 4678887 3566678888889999999999877766 22221 12244432 2444444568889999999999888877
Q ss_pred CCCCCeEEEEEcCCCCeEEEEecCCeEEEEeCCCCceeeeeecCCC----CCeEEEEECCCCCEEEEEeCCCeEEEEeCC
Q psy4391 151 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN----PPVSFVKFSPNGKYILAATLDNTLKLWDSY 226 (231)
Q Consensus 151 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~----~~i~~~~~s~~g~~l~~~s~d~~v~vwd~~ 226 (231)
..... ..++ ++++.|+.+..++.|.++|..+.+.+..+..... ..++.+.|. +|+..+..-.++.|.+.|+.
T Consensus 134 ~~~eG-wGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~ 209 (268)
T 3nok_A 134 YSGEG-WGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEIDPA 209 (268)
T ss_dssp CSSCC-CCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTT
T ss_pred CCCce-eEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEeCC
Confidence 54322 2333 5678887777788999999999988777654321 134566776 67655444457789888864
Q ss_pred C
Q psy4391 227 P 227 (231)
Q Consensus 227 ~ 227 (231)
.
T Consensus 210 T 210 (268)
T 3nok_A 210 T 210 (268)
T ss_dssp T
T ss_pred C
Confidence 3
No 253
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.76 E-value=9.8e-07 Score=64.38 Aligned_cols=149 Identities=13% Similarity=0.186 Sum_probs=100.7
Q ss_pred EEEEEECCCCCEEEEecCCC--cEEEEeCCCceeeeeecCCCcceEEEEECCCCCEEEEee-cCCcEEEEECCCCceeee
Q psy4391 72 ISDVAWSSDSRLLVSGSDDK--TLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS-FDESVRIWDVRTGKCLKT 148 (231)
Q Consensus 72 v~~~~~~~~~~~l~~~~~~g--~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~v~d~~~~~~~~~ 148 (231)
...+.|+ ++..+.+.+.+| .|+.+|+++++.+..+..... .......+++..+.... .++.+.+||.++.+.+..
T Consensus 45 tqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~-~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~t 122 (262)
T 3nol_A 45 TEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKR-YFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRS 122 (262)
T ss_dssp EEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTT-CCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEE
T ss_pred cceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCc-cceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEE
Confidence 4678888 666666777666 899999999998877764332 22222233344555544 578899999999998888
Q ss_pred ccCCCCCeEEEEEcCCCCeEEEEecCCeEEEEeCCCCceeeeeecCC-C---CCeEEEEECCCCCEEEEEeCCCeEEEEe
Q psy4391 149 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD-N---PPVSFVKFSPNGKYILAATLDNTLKLWD 224 (231)
Q Consensus 149 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~-~---~~i~~~~~s~~g~~l~~~s~d~~v~vwd 224 (231)
+...... ..++++++.|+....++.|.++|..+.+.+..+.... . ..++.+.|. +|+..+..-.++.|.+.|
T Consensus 123 i~~~~eG---~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vID 198 (262)
T 3nol_A 123 FNYDGEG---WGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRID 198 (262)
T ss_dssp EECSSCC---CCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEC
T ss_pred EECCCCc---eEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEE
Confidence 7754322 2334577777776667889999999998877765432 1 234556776 676554444577888888
Q ss_pred CC
Q psy4391 225 SY 226 (231)
Q Consensus 225 ~~ 226 (231)
+.
T Consensus 199 p~ 200 (262)
T 3nol_A 199 PE 200 (262)
T ss_dssp TT
T ss_pred CC
Confidence 63
No 254
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.74 E-value=1.1e-06 Score=73.57 Aligned_cols=183 Identities=16% Similarity=0.238 Sum_probs=116.1
Q ss_pred EEEECCCCCEEEEEeCCC-------------------cEEEeecCCCcEEEEEecc--c-------ccEEEEEECCCCC-
Q psy4391 32 SVKFSPNGEWLASSSADK-------------------LIKIWGAYDGKFEKTISGH--K-------LGISDVAWSSDSR- 82 (231)
Q Consensus 32 ~~~~~~~~~~l~~~~~dg-------------------~i~i~~~~~~~~~~~~~~~--~-------~~v~~~~~~~~~~- 82 (231)
.+++.+++.+++.+..++ .|.-+|..+++....+... . .+..-..+..+|+
T Consensus 234 ~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~ 313 (668)
T 1kv9_A 234 SMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKP 313 (668)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEE
T ss_pred ceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcE
Confidence 468888888888877665 3888999999887766532 1 1222122223564
Q ss_pred --EEEEecCCCcEEEEeCCCceeeeeecCCC------------cce------------------------EEEEECCCCC
Q psy4391 83 --LLVSGSDDKTLKIWELSSGKCLKTLKGHS------------NYV------------------------FCCNFNPQSN 124 (231)
Q Consensus 83 --~l~~~~~~g~i~~~d~~~~~~~~~~~~~~------------~~v------------------------~~~~~~~~~~ 124 (231)
.++.++.+|.++++|.++++.+...+... ..+ ..++++|+..
T Consensus 314 ~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g 393 (668)
T 1kv9_A 314 RKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTG 393 (668)
T ss_dssp EEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTT
T ss_pred EEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCC
Confidence 68889999999999999988763322110 000 0145667666
Q ss_pred EEEEee------------------------------------cCCcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeE
Q psy4391 125 LIVSGS------------------------------------FDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLI 168 (231)
Q Consensus 125 ~l~~~~------------------------------------~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 168 (231)
+++... .++.|..||+.+++.+.+..... +.....+...+.++
T Consensus 394 ~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~-~~~~~~~~t~gg~v 472 (668)
T 1kv9_A 394 LVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPT-HWNGGTLSTAGNLV 472 (668)
T ss_dssp EEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESS-SCCCCEEEETTTEE
T ss_pred EEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCC-CCcCceeEeCCCEE
Confidence 655421 23779999999999877765432 22222334457788
Q ss_pred EEEecCCeEEEEeCCCCceeeeeecCCCCCeEEEEECCCCC-EEEEEe
Q psy4391 169 VSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK-YILAAT 215 (231)
Q Consensus 169 ~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~-~l~~~s 215 (231)
+.++.||.++.||.++++.+..+.........-+.+..+|+ |++.++
T Consensus 473 f~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~~~~G~~yva~~~ 520 (668)
T 1kv9_A 473 FQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGRQYVAIMA 520 (668)
T ss_dssp EEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred EEECCcccchhhhhhcChhheEecCCCCcccCceEEEECCEEEEEEEe
Confidence 88999999999999999988776544321111233445666 555554
No 255
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.73 E-value=4.6e-06 Score=66.03 Aligned_cols=152 Identities=11% Similarity=0.098 Sum_probs=95.4
Q ss_pred ceEEEEECC-CCCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEecC-CC----cEEEEeCCCce
Q psy4391 29 AVSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSD-DK----TLKIWELSSGK 102 (231)
Q Consensus 29 ~i~~~~~~~-~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~g----~i~~~d~~~~~ 102 (231)
....++++| ++..|+.+...+.|+.++...+.... +.........++|+++++.|+.+.. ++ .+.+++.. +.
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~-~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~-g~ 215 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVST-VYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE-SG 215 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEE-EECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG-GT
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEE-EecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC-Cc
Confidence 456889998 45666665555888888886655443 3334456788999999996665543 22 23334432 22
Q ss_pred ee--eeecCCCcceEEEEECC-CCCEEEEeecCCcEEEEECCCCceeeeccC-CCCCeEEEEEcCCCCeEE-EEecCCeE
Q psy4391 103 CL--KTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVRTGKCLKTLPA-HSDPVSAVHFNRDGSLIV-SSSYDGLC 177 (231)
Q Consensus 103 ~~--~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~-~~~~dg~i 177 (231)
.. ..+.. ......++++| ++.++++-..++.|..++...+........ .......++|+|++++|+ +-...+.|
T Consensus 216 ~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I 294 (430)
T 3tc9_A 216 FKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYI 294 (430)
T ss_dssp SCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEE
T ss_pred eeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEE
Confidence 11 12221 12244678899 677777666788999999986654222221 123467899999999554 44566789
Q ss_pred EEEeCC
Q psy4391 178 RIWDTA 183 (231)
Q Consensus 178 ~v~d~~ 183 (231)
..++..
T Consensus 295 ~~~~~d 300 (430)
T 3tc9_A 295 LRSDYD 300 (430)
T ss_dssp EEEEEE
T ss_pred EEEeCC
Confidence 888764
No 256
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.73 E-value=3.1e-05 Score=58.71 Aligned_cols=196 Identities=9% Similarity=0.016 Sum_probs=118.0
Q ss_pred cceEEEEECCCCCEEEEE-eCCCcEEEeecCC----CcEEEEEecccccEEEEEECCCCCEE-EEecCCCcEEEEeCCCc
Q psy4391 28 KAVSSVKFSPNGEWLASS-SADKLIKIWGAYD----GKFEKTISGHKLGISDVAWSSDSRLL-VSGSDDKTLKIWELSSG 101 (231)
Q Consensus 28 ~~i~~~~~~~~~~~l~~~-~~dg~i~i~~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~~g~i~~~d~~~~ 101 (231)
....+++|++.+..|+.+ ..++.|..++... ......+.........+++++.+..| ++-...+.|.+++++..
T Consensus 30 ~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~ 109 (316)
T 1ijq_A 30 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 109 (316)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS
T ss_pred CceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCC
Confidence 456799999876655544 4567888888764 22222232222345778888755555 45566789999998764
Q ss_pred eeeeeecCCCcceEEEEECCCCCEEEEeecC--CcEEEEECCCCceeeec-cCCCCCeEEEEEcCCCCeEEEE-ecCCeE
Q psy4391 102 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD--ESVRIWDVRTGKCLKTL-PAHSDPVSAVHFNRDGSLIVSS-SYDGLC 177 (231)
Q Consensus 102 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--~~i~v~d~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~-~~dg~i 177 (231)
.....+.........++++|.+..|+..... +.|..+++.... ...+ ...-.....++++|++..|+.+ +..+.|
T Consensus 110 ~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~-~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I 188 (316)
T 1ijq_A 110 KRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSI 188 (316)
T ss_dssp SEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC-EEEEECSSCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred ceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCC-eEEEEECCCCCceEEEEeccCCEEEEEECCCCeE
Confidence 4333333333567789999876666555442 688888886432 2322 2223467889999877766554 456799
Q ss_pred EEEeCCCCceeeeeecC--CCCCeEEEEECCCCCEEEEEeCCCeEEEEeCC
Q psy4391 178 RIWDTASGQCLKTLIDD--DNPPVSFVKFSPNGKYILAATLDNTLKLWDSY 226 (231)
Q Consensus 178 ~v~d~~~~~~~~~~~~~--~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~~ 226 (231)
..+|+.... .+.+... .......+++.. +..+++-...++|..+|..
T Consensus 189 ~~~d~dg~~-~~~~~~~~~~~~~P~giav~~-~~ly~~d~~~~~V~~~~~~ 237 (316)
T 1ijq_A 189 SSIDVNGGN-RKTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFSANRL 237 (316)
T ss_dssp EEEETTSCS-CEEEEECTTTTSSEEEEEEET-TEEEEEETTTTEEEEEETT
T ss_pred EEEecCCCc-eEEEeecCCccCCcEEEEEEC-CEEEEEECCCCeEEEEeCC
Confidence 999987433 3333321 112234567643 4444445456788888753
No 257
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.72 E-value=1.6e-07 Score=72.66 Aligned_cols=162 Identities=10% Similarity=-0.067 Sum_probs=108.8
Q ss_pred cEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEec----------CCCcEEEEeCCCceeeeeecCC-------Cc
Q psy4391 50 LIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGS----------DDKTLKIWELSSGKCLKTLKGH-------SN 112 (231)
Q Consensus 50 ~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~~g~i~~~d~~~~~~~~~~~~~-------~~ 112 (231)
.|.++|..+++....+.....+ .+.++||+++++++. .++.|.+||+.+++.+..+... ..
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~ 124 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGP 124 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSC
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCC
Confidence 7889999999988888755555 799999999988875 3678999999999988887532 12
Q ss_pred ceEEEEECCCCCEEEEeec--CCcEEE--EECCCCceeeeccCCCCCeEEEEEcCCCC-eEEEEecCCeEEEEeCCC---
Q psy4391 113 YVFCCNFNPQSNLIVSGSF--DESVRI--WDVRTGKCLKTLPAHSDPVSAVHFNRDGS-LIVSSSYDGLCRIWDTAS--- 184 (231)
Q Consensus 113 ~v~~~~~~~~~~~l~~~~~--d~~i~v--~d~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~v~d~~~--- 184 (231)
....+.++|||++++.+.. +..+.+ +|+.+ +..+.... . ..+.|+++ .+++.+.||.+.+.|+.+
T Consensus 125 ~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~-~---~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~ 197 (368)
T 1mda_H 125 RVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSAS-C---FHIHPGAAATHYLGSCPASLAASDLAAAPA 197 (368)
T ss_dssp CTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSS-C---CCCEEEETTEEECCCCTTSCEEEECCSSCC
T ss_pred CcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCC-c---eEEccCCCeEEEEEcCCCCEEEEECccccc
Confidence 2346789999999998875 456888 99876 34443211 1 12234443 344566788888888876
Q ss_pred --Cceeee---eecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeC
Q psy4391 185 --GQCLKT---LIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225 (231)
Q Consensus 185 --~~~~~~---~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~ 225 (231)
++.... .......+. + ++++..++..+. +.|.+.|.
T Consensus 198 ~~~~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~viD~ 238 (368)
T 1mda_H 198 AAGIVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAVA-SSILQGDI 238 (368)
T ss_dssp CCEECCCCSCTTSCBCSCCE---E-ETTTTEEEECBS-SCCEEEEC
T ss_pred cCCeEEEEeeeeeeCCCCcc---c-cccCCEEEEEcC-CEEEEEEC
Confidence 432211 111122233 3 566666666666 88888875
No 258
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.72 E-value=3.4e-05 Score=58.47 Aligned_cols=176 Identities=7% Similarity=-0.027 Sum_probs=108.5
Q ss_pred CCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEE-EecCCCcEEEEeCCC----ceeeeeecCCCcceEEEEECCC
Q psy4391 48 DKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV-SGSDDKTLKIWELSS----GKCLKTLKGHSNYVFCCNFNPQ 122 (231)
Q Consensus 48 dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~~g~i~~~d~~~----~~~~~~~~~~~~~v~~~~~~~~ 122 (231)
...|+..+.........+.. ......++|++.++.|+ +-..++.|..+++.+ ......+.........+++++.
T Consensus 9 ~~~I~~i~~~~~~~~~~~~~-~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~ 87 (316)
T 1ijq_A 9 RHEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 87 (316)
T ss_dssp BSSEEEEETTSCCCEEEECS-CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETT
T ss_pred CCeEEEEECCCcceEehhcC-CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeec
Confidence 45678888776655444433 34578899998766555 445568899999875 2222223222234567788865
Q ss_pred C-CEEEEeecCCcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeEEEEecC--CeEEEEeCCCCceeeeeecCCCCCe
Q psy4391 123 S-NLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD--GLCRIWDTASGQCLKTLIDDDNPPV 199 (231)
Q Consensus 123 ~-~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--g~i~v~d~~~~~~~~~~~~~~~~~i 199 (231)
+ ++.++-...+.|.++|+........+.........++++|.+..|+.+... +.|..+++... ....+....-...
T Consensus 88 ~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~-~~~~~~~~~~~~P 166 (316)
T 1ijq_A 88 HSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYSLVTENIQWP 166 (316)
T ss_dssp TTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-CEEEEECSSCSCE
T ss_pred CCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCC-CeEEEEECCCCCc
Confidence 4 444555667889999987543322222233567899999976666555443 68888887643 2333332223345
Q ss_pred EEEEECCCCCEEEEEeC-CCeEEEEeC
Q psy4391 200 SFVKFSPNGKYILAATL-DNTLKLWDS 225 (231)
Q Consensus 200 ~~~~~s~~g~~l~~~s~-d~~v~vwd~ 225 (231)
..+++++++..|+.+.. .++|..+|.
T Consensus 167 ~gla~d~~~~~lY~~D~~~~~I~~~d~ 193 (316)
T 1ijq_A 167 NGITLDLLSGRLYWVDSKLHSISSIDV 193 (316)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred eEEEEeccCCEEEEEECCCCeEEEEec
Confidence 78999998777766654 568988885
No 259
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.71 E-value=3.9e-05 Score=58.97 Aligned_cols=192 Identities=7% Similarity=-0.069 Sum_probs=117.5
Q ss_pred eEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEe-cCCCcEEEEeCCCceeeeeec
Q psy4391 30 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSG-SDDKTLKIWELSSGKCLKTLK 108 (231)
Q Consensus 30 i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~g~i~~~d~~~~~~~~~~~ 108 (231)
-+|.+..+++ +|+.+ ....|+..+.........+.. ......++|++..+.|+.+ ...+.|..+++........+.
T Consensus 36 ~~C~~~~~~~-~ll~~-~~~~I~~i~~~g~~~~~~~~~-~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~ 112 (349)
T 3v64_C 36 RSCKALGPEP-VLLFA-NRIDIRQVLPHRSEYTLLLNN-LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVS 112 (349)
T ss_dssp SCEEESSSCC-EEEEE-CBSCEEEECTTSCCEEEEECS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC
T ss_pred CcccccccCc-eeEee-cccceEEEeCCCCeeEEeecC-CCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEe
Confidence 3455555643 44433 345677777765544443333 3457889999866666544 457789999988655433333
Q ss_pred CCCcceEEEEECCCC-CEEEEeecCCcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeEEEE-ecC-CeEEEEeCCCC
Q psy4391 109 GHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSS-SYD-GLCRIWDTASG 185 (231)
Q Consensus 109 ~~~~~v~~~~~~~~~-~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d-g~i~v~d~~~~ 185 (231)
........+++++.+ ++.++-...+.|.+.++........+...-.....++++|.+..|+.. ... +.|..+++...
T Consensus 113 ~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~ 192 (349)
T 3v64_C 113 TGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS 192 (349)
T ss_dssp SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred CCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCC
Confidence 333344577888754 444555567889999987544322233333567899999966655544 344 78888887643
Q ss_pred ceeeeeecCCCCCeEEEEECCCCCEEEEEeC-CCeEEEEeC
Q psy4391 186 QCLKTLIDDDNPPVSFVKFSPNGKYILAATL-DNTLKLWDS 225 (231)
Q Consensus 186 ~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~-d~~v~vwd~ 225 (231)
. ...+.......-..++++|++..|+.+.. .++|..+|.
T Consensus 193 ~-~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~ 232 (349)
T 3v64_C 193 G-RRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANL 232 (349)
T ss_dssp S-CEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred C-cEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeC
Confidence 3 23332222333578999987777766654 568888875
No 260
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.69 E-value=7e-06 Score=59.33 Aligned_cols=149 Identities=14% Similarity=0.112 Sum_probs=98.3
Q ss_pred EEEEEECCCCCEEEEecCC--CcEEEEeCCCceeeeeecCCCcce-EEEEECCCCCEEEEeecCCcEEEEECCCCceeee
Q psy4391 72 ISDVAWSSDSRLLVSGSDD--KTLKIWELSSGKCLKTLKGHSNYV-FCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKT 148 (231)
Q Consensus 72 v~~~~~~~~~~~l~~~~~~--g~i~~~d~~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~ 148 (231)
...+.|++ +..+.+.+.. ..|+.+|+++++....+....... ..+... .+++......++.+.+||.++.+.+..
T Consensus 23 tqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~-~~~ly~ltw~~~~v~v~D~~tl~~~~t 100 (243)
T 3mbr_X 23 TEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW-RDRLIQLTWRNHEGFVYDLATLTPRAR 100 (243)
T ss_dssp EEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE-TTEEEEEESSSSEEEEEETTTTEEEEE
T ss_pred cccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe-CCEEEEEEeeCCEEEEEECCcCcEEEE
Confidence 66788886 5555666665 489999999999887775433211 223332 233444445688899999999998888
Q ss_pred ccCCCCCeEEEEEcCCCCeEEEEecCCeEEEEeCCCCceeeeeecCCC----CCeEEEEECCCCCEEEEEeCCCeEEEEe
Q psy4391 149 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN----PPVSFVKFSPNGKYILAATLDNTLKLWD 224 (231)
Q Consensus 149 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~----~~i~~~~~s~~g~~l~~~s~d~~v~vwd 224 (231)
+.....+ ..++ +++..|+.+..++.|.++|..+.+.+.++..... ..++.+.+. +|+..+..-.++.|.+.|
T Consensus 101 i~~~~~G-wglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vID 176 (243)
T 3mbr_X 101 FRYPGEG-WALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARID 176 (243)
T ss_dssp EECSSCC-CEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEEC
T ss_pred EeCCCCc-eEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEEEEE
Confidence 7754333 3343 5677777766788999999999888777654321 234556655 566544444567888887
Q ss_pred CC
Q psy4391 225 SY 226 (231)
Q Consensus 225 ~~ 226 (231)
+.
T Consensus 177 p~ 178 (243)
T 3mbr_X 177 PA 178 (243)
T ss_dssp TT
T ss_pred CC
Confidence 63
No 261
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.67 E-value=3.8e-05 Score=57.79 Aligned_cols=186 Identities=12% Similarity=0.061 Sum_probs=108.0
Q ss_pred cceEEEEECCCCCEEEEEeCC-C-cEEEeecCCCcEEEEEecc-cccEEEEEECCCCCEEEEecCCCcEEEEeCCCcee-
Q psy4391 28 KAVSSVKFSPNGEWLASSSAD-K-LIKIWGAYDGKFEKTISGH-KLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKC- 103 (231)
Q Consensus 28 ~~i~~~~~~~~~~~l~~~~~d-g-~i~i~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~- 103 (231)
.....+++.++|+++++.... + .|..++..+++........ ......++..+++..+++...++.|+.+|..+++.
T Consensus 72 ~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~ 151 (306)
T 2p4o_A 72 GKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGS 151 (306)
T ss_dssp SEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred CCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEe
Confidence 357789999999966654332 2 4666666666654332211 12234455555554455555688899999875421
Q ss_pred eeee---------cCCCcceEEEEECCCCCEEEEe-ecCCcEEEEECCC-Cce--eeeccCCCCCeEEEEEcCCCCeEEE
Q psy4391 104 LKTL---------KGHSNYVFCCNFNPQSNLIVSG-SFDESVRIWDVRT-GKC--LKTLPAHSDPVSAVHFNRDGSLIVS 170 (231)
Q Consensus 104 ~~~~---------~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~v~d~~~-~~~--~~~~~~~~~~v~~~~~~~~~~~l~~ 170 (231)
+... .........+ +++++.++.+ ...+.|..+|+.. ++. ...+.. ......++++++|+++++
T Consensus 152 v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~l~va 228 (306)
T 2p4o_A 152 IWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGNLYGA 228 (306)
T ss_dssp EEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCCEEEE
T ss_pred EEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCCEEEE
Confidence 1100 0111223344 7777766555 4567899999874 321 111111 123456889999987777
Q ss_pred EecCCeEEEEeCCCCceeeee-ecCCCCCeEEEEEC---CCCCEEEEEeCC
Q psy4391 171 SSYDGLCRIWDTASGQCLKTL-IDDDNPPVSFVKFS---PNGKYILAATLD 217 (231)
Q Consensus 171 ~~~dg~i~v~d~~~~~~~~~~-~~~~~~~i~~~~~s---~~g~~l~~~s~d 217 (231)
....+.|.++|.. ++..... ..........++|. |+++.|++++..
T Consensus 229 ~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 229 THIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp CBTTCCEEEECTT-CCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred eCCCCeEEEECCC-CCEEEEeecccccCCceEEEEecccCCCCEEEEECCC
Confidence 6667899999975 5432211 11122346789998 898888777653
No 262
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.66 E-value=6.6e-05 Score=58.84 Aligned_cols=196 Identities=9% Similarity=0.008 Sum_probs=118.7
Q ss_pred cceEEEEECCCCCEEEEEe-CCCcEEEeecCCC----cEEEEEecccccEEEEEECCCCCEE-EEecCCCcEEEEeCCCc
Q psy4391 28 KAVSSVKFSPNGEWLASSS-ADKLIKIWGAYDG----KFEKTISGHKLGISDVAWSSDSRLL-VSGSDDKTLKIWELSSG 101 (231)
Q Consensus 28 ~~i~~~~~~~~~~~l~~~~-~dg~i~i~~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~~g~i~~~d~~~~ 101 (231)
..+..++|++.+..|+.+. ..+.|+.++.... .....+.........+++.+.+..| ++-...+.|.+.+++..
T Consensus 112 ~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~ 191 (400)
T 3p5b_L 112 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 191 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTC
T ss_pred CcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCC
Confidence 4677899998666665543 4577888877542 2233333334457788898754444 55556788999998865
Q ss_pred eeeeeecCCCcceEEEEECCCCCEEEEeec--CCcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeEEEE-ecCCeEE
Q psy4391 102 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSF--DESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSS-SYDGLCR 178 (231)
Q Consensus 102 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~ 178 (231)
.....+.........++++|.+..|+.... .+.|...++............-.....|++++++..|+.+ ...+.|.
T Consensus 192 ~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~ 271 (400)
T 3p5b_L 192 KRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSIS 271 (400)
T ss_dssp SEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred ceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEE
Confidence 544444434455788999997666665543 4689999987543322223333567889999877766655 4567899
Q ss_pred EEeCCCCceeeeeecC--CCCCeEEEEECCCCCEEEEEeCCCeEEEEeC
Q psy4391 179 IWDTASGQCLKTLIDD--DNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225 (231)
Q Consensus 179 v~d~~~~~~~~~~~~~--~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~ 225 (231)
.+|+.... ...+... .-.....+++.. +..+.+-...+.|..+|.
T Consensus 272 ~~d~dG~~-~~~~~~~~~~l~~P~gl~v~~-~~lywtd~~~~~V~~~~~ 318 (400)
T 3p5b_L 272 SIDVNGGN-RKTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFSANR 318 (400)
T ss_dssp EEETTSCC-CEEEEECSSTTSSEEEEEEET-TEEEEEESSSCSEEEEES
T ss_pred EEeCCCCc-cEEEEeCCCCCCCCEEEEEeC-CEEEEecCCCCeEEEEEc
Confidence 99986543 3333222 112234566532 233344445668887773
No 263
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.65 E-value=4.3e-05 Score=57.68 Aligned_cols=159 Identities=9% Similarity=0.092 Sum_probs=107.1
Q ss_pred ccccceEEEEECCCCCEEEEEe-CCCcEEEeecCCCcEEEEEecc-------cccEEEEEE---CCCCCEEEEec-----
Q psy4391 25 GHTKAVSSVKFSPNGEWLASSS-ADKLIKIWGAYDGKFEKTISGH-------KLGISDVAW---SSDSRLLVSGS----- 88 (231)
Q Consensus 25 ~h~~~i~~~~~~~~~~~l~~~~-~dg~i~i~~~~~~~~~~~~~~~-------~~~v~~~~~---~~~~~~l~~~~----- 88 (231)
....--.+++|.+....+..++ ..|.|..|+...+......... ...+..+.| .|+++++++..
T Consensus 10 ~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af 89 (334)
T 2p9w_A 10 VKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSF 89 (334)
T ss_dssp CTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTT
T ss_pred CcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccc
Confidence 3344445789988666555555 7899999998755443332211 113578999 68877776543
Q ss_pred --------CCCcEEEEeCC---CceeeeeecC-------------CCcceEEEEECCCCCEEEEeecC-CcEEEEECCCC
Q psy4391 89 --------DDKTLKIWELS---SGKCLKTLKG-------------HSNYVFCCNFNPQSNLIVSGSFD-ESVRIWDVRTG 143 (231)
Q Consensus 89 --------~~g~i~~~d~~---~~~~~~~~~~-------------~~~~v~~~~~~~~~~~l~~~~~d-~~i~v~d~~~~ 143 (231)
.+..|..||+. +++.+....- .......+...++|+..++++.. +.|..++....
T Consensus 90 ~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~ 169 (334)
T 2p9w_A 90 NFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGK 169 (334)
T ss_dssp CTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSC
T ss_pred cccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCC
Confidence 25678899998 6665543321 11246789999999999999888 88888887643
Q ss_pred ceeeecc------CCCCCeEEEEEcCCCCeEEEEecCCeEEEEeCCC
Q psy4391 144 KCLKTLP------AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 184 (231)
Q Consensus 144 ~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~ 184 (231)
. +..+. ........|+++|++..|++....|.+..+|+..
T Consensus 170 ~-~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 170 T-VSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp C-EEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred E-EeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 2 22211 1112356889999999888887799999999874
No 264
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.65 E-value=2.7e-05 Score=59.25 Aligned_cols=184 Identities=11% Similarity=0.259 Sum_probs=115.4
Q ss_pred CCCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECC----CCCE--E-EEec-C--CCcEEEEeC--CCceeee
Q psy4391 38 NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS----DSRL--L-VSGS-D--DKTLKIWEL--SSGKCLK 105 (231)
Q Consensus 38 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~--l-~~~~-~--~g~i~~~d~--~~~~~~~ 105 (231)
...+++.....+.+.+||. +++....+.. ..+..+..-| .|+. + ++.. . ++.|.+|++ .+++ +.
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~ 114 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQ 114 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EE
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-ee
Confidence 3456666677889999999 7887777753 3445554444 2332 2 3333 3 578999966 3333 33
Q ss_pred eecC-------CCcceEEEEE--CCC-CC-EEEEeecCCcEEEEECC---C----CceeeeccCCCCCeEEEEEcCCCCe
Q psy4391 106 TLKG-------HSNYVFCCNF--NPQ-SN-LIVSGSFDESVRIWDVR---T----GKCLKTLPAHSDPVSAVHFNRDGSL 167 (231)
Q Consensus 106 ~~~~-------~~~~v~~~~~--~~~-~~-~l~~~~~d~~i~v~d~~---~----~~~~~~~~~~~~~v~~~~~~~~~~~ 167 (231)
.+.. ....+..+++ +|. +. +++....+|.+..|++. . .+.++.+.. .+.+..+...+....
T Consensus 115 ~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~ 193 (355)
T 3amr_A 115 SMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYGR 193 (355)
T ss_dssp ECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTTE
T ss_pred eccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCCe
Confidence 3311 1133444555 674 43 57777888999998883 2 244556654 356788889988889
Q ss_pred EEEEecCCeEEEEeCC-----CCceeeeee-cCCCCCeEEEEE--CCCCC-EEEEEe-CCCeEEEEeCC
Q psy4391 168 IVSSSYDGLCRIWDTA-----SGQCLKTLI-DDDNPPVSFVKF--SPNGK-YILAAT-LDNTLKLWDSY 226 (231)
Q Consensus 168 l~~~~~dg~i~v~d~~-----~~~~~~~~~-~~~~~~i~~~~~--s~~g~-~l~~~s-~d~~v~vwd~~ 226 (231)
|+.+-++.-|..++.+ +.+.+..+. ......+..|++ .++|+ ||++++ .++...+||..
T Consensus 194 Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 194 LYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp EEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred EEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 9999998778888855 233333321 112234666666 66666 777777 46799999975
No 265
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.65 E-value=3.6e-06 Score=66.63 Aligned_cols=152 Identities=10% Similarity=0.088 Sum_probs=95.6
Q ss_pred EEEEEECC-CCCEEEEecCCCcEEEEeCCCceeeeeecCCCcceEEEEECCCCCEEEEeec-CC----cEEEEECCCCce
Q psy4391 72 ISDVAWSS-DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF-DE----SVRIWDVRTGKC 145 (231)
Q Consensus 72 v~~~~~~~-~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~----~i~v~d~~~~~~ 145 (231)
...++++| ++..|+.+...+.|+.+|++++....... .......++++++++.|+.+.. ++ .+..++.. +..
T Consensus 139 P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~-g~~ 216 (430)
T 3tc9_A 139 AVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS-GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE-SGF 216 (430)
T ss_dssp CCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC-CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG-GTS
T ss_pred CCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec-CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC-Cce
Confidence 46788998 45556666555889999998766544433 4455788999999996665554 22 23334432 222
Q ss_pred e--eeccCCCCCeEEEEEcC-CCCeEEEEecCCeEEEEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEe-CCCeEE
Q psy4391 146 L--KTLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT-LDNTLK 221 (231)
Q Consensus 146 ~--~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s-~d~~v~ 221 (231)
. ..+.. ......++++| ++.++++-..++.|..++...+.............-..++|+|+|++|+.+. ..++|.
T Consensus 217 ~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~ 295 (430)
T 3tc9_A 217 KVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYIL 295 (430)
T ss_dssp CSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEE
T ss_pred eeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEE
Confidence 1 12211 12345678999 6666666667789999999876542222222222346799999999665554 567999
Q ss_pred EEeCC
Q psy4391 222 LWDSY 226 (231)
Q Consensus 222 vwd~~ 226 (231)
.++..
T Consensus 296 ~~~~d 300 (430)
T 3tc9_A 296 RSDYD 300 (430)
T ss_dssp EEEEE
T ss_pred EEeCC
Confidence 98753
No 266
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.64 E-value=1.4e-05 Score=63.39 Aligned_cols=195 Identities=10% Similarity=0.079 Sum_probs=113.6
Q ss_pred ceEEEEECCC--CCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEecCC---C-cEEEEeCCCce
Q psy4391 29 AVSSVKFSPN--GEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDD---K-TLKIWELSSGK 102 (231)
Q Consensus 29 ~i~~~~~~~~--~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~---g-~i~~~d~~~~~ 102 (231)
....++|+|+ +..|+.+...+.|+.++..++.... +.........++++++++.+++.... . .+...+...+.
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~-~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~ 218 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDI-KTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGF 218 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEE-ECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTT
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEE-eecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCe
Confidence 3568999985 4445554444889999987665543 33344568899999999944443321 1 12223322111
Q ss_pred e-eeeecCCCcceEEEEECC-CCCEEEEeecCCcEEEEECCCCceeeec-cCC-CCCeEEEEEcCCCCeEEE-EecCCeE
Q psy4391 103 C-LKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVRTGKCLKTL-PAH-SDPVSAVHFNRDGSLIVS-SSYDGLC 177 (231)
Q Consensus 103 ~-~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~v~d~~~~~~~~~~-~~~-~~~v~~~~~~~~~~~l~~-~~~dg~i 177 (231)
. ...+. .......++++| ++.+.++-..++.|+.+|..++.....+ ... ......++|+|+++.|+. -...+.|
T Consensus 219 ~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I 297 (433)
T 4hw6_A 219 TERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCI 297 (433)
T ss_dssp CCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEE
T ss_pred ecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEE
Confidence 0 01111 112234577898 6676666667788999999877642222 111 122346999999995554 4456789
Q ss_pred EEEeCC--CCce--eeeeecC-C-------------CCCeEEEEE---------CCCCCEEEEEeCCCeEEEEeC
Q psy4391 178 RIWDTA--SGQC--LKTLIDD-D-------------NPPVSFVKF---------SPNGKYILAATLDNTLKLWDS 225 (231)
Q Consensus 178 ~v~d~~--~~~~--~~~~~~~-~-------------~~~i~~~~~---------s~~g~~l~~~s~d~~v~vwd~ 225 (231)
..++.. ++.. ...+... . -..-..+++ .++|.++++-...++|+.++.
T Consensus 298 ~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~ 372 (433)
T 4hw6_A 298 YRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP 372 (433)
T ss_dssp EEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT
T ss_pred EEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC
Confidence 998765 2321 1111111 0 012355888 778877777667789999874
No 267
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.62 E-value=3e-06 Score=70.86 Aligned_cols=178 Identities=13% Similarity=0.180 Sum_probs=114.4
Q ss_pred CCcEEEeecCCCcEEEEEeccc---c----------------------------cEEEEEECCCCCEEEEecCCC-----
Q psy4391 48 DKLIKIWGAYDGKFEKTISGHK---L----------------------------GISDVAWSSDSRLLVSGSDDK----- 91 (231)
Q Consensus 48 dg~i~i~~~~~~~~~~~~~~~~---~----------------------------~v~~~~~~~~~~~l~~~~~~g----- 91 (231)
+|.|..+|..+++....+.... . ....++++|+...++.+..++
T Consensus 177 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~ 256 (668)
T 1kv9_A 177 RGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNR 256 (668)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCH
T ss_pred CCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCcccc
Confidence 5889999999998877664210 0 001357778778888877665
Q ss_pred --------------cEEEEeCCCceeeeeecCC--C-------cceEEEEECCCCC---EEEEeecCCcEEEEECCCCce
Q psy4391 92 --------------TLKIWELSSGKCLKTLKGH--S-------NYVFCCNFNPQSN---LIVSGSFDESVRIWDVRTGKC 145 (231)
Q Consensus 92 --------------~i~~~d~~~~~~~~~~~~~--~-------~~v~~~~~~~~~~---~l~~~~~d~~i~v~d~~~~~~ 145 (231)
.|..+|.++++.+-.++.. . .......+..+|+ .++.++.+|.++++|.++|+.
T Consensus 257 ~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~ 336 (668)
T 1kv9_A 257 EVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKL 336 (668)
T ss_dssp HHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCE
T ss_pred CCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCE
Confidence 3899999999877665431 1 2222222333554 688899999999999999987
Q ss_pred eeeccCCC------------CCe------------------------EEEEEcCCCCeEEEEe-----------------
Q psy4391 146 LKTLPAHS------------DPV------------------------SAVHFNRDGSLIVSSS----------------- 172 (231)
Q Consensus 146 ~~~~~~~~------------~~v------------------------~~~~~~~~~~~l~~~~----------------- 172 (231)
+....... .++ ..++++|+...+++..
T Consensus 337 l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~ 416 (668)
T 1kv9_A 337 ISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTR 416 (668)
T ss_dssp EEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCC
T ss_pred eccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccc
Confidence 63322111 000 1256777766655421
Q ss_pred -------------------cCCeEEEEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCC
Q psy4391 173 -------------------YDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSYP 227 (231)
Q Consensus 173 -------------------~dg~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~~~ 227 (231)
.+|.|..||+.+++.+-+..... +.....+...|.++++++.|+.++.||...
T Consensus 417 ~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~--~~~~~~~~t~gg~vf~g~~dg~l~a~d~~t 488 (668)
T 1kv9_A 417 KAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPT--HWNGGTLSTAGNLVFQGTAAGQMHAYSADK 488 (668)
T ss_dssp SSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESS--SCCCCEEEETTTEEEEECTTSEEEEEETTT
T ss_pred cccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCC--CCcCceeEeCCCEEEEECCcccchhhhhhc
Confidence 23789999999998754443322 122223344577888999999999999743
No 268
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.59 E-value=8.5e-05 Score=56.33 Aligned_cols=196 Identities=7% Similarity=0.011 Sum_probs=116.5
Q ss_pred cceEEEEECCCCCEEE-EEeCCCcEEEeecCCCcE-EEEEecccccEEEEEECCCCCEE-EEecCCCcEEEEeCCCceee
Q psy4391 28 KAVSSVKFSPNGEWLA-SSSADKLIKIWGAYDGKF-EKTISGHKLGISDVAWSSDSRLL-VSGSDDKTLKIWELSSGKCL 104 (231)
Q Consensus 28 ~~i~~~~~~~~~~~l~-~~~~dg~i~i~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l-~~~~~~g~i~~~d~~~~~~~ 104 (231)
....+++|.+.+..|+ +-...+.|..++...... ...+.........+++.+.+..| ++-...+.|.+++++.....
T Consensus 35 ~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~ 114 (318)
T 3sov_A 35 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRK 114 (318)
T ss_dssp EEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred CccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEE
Confidence 3466889988655554 444567888888765432 12222222345678888755544 55556778999998754333
Q ss_pred eeecCCCcceEEEEECCCCCEEEEeec--CCcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeEEEE-ecCCeEEEEe
Q psy4391 105 KTLKGHSNYVFCCNFNPQSNLIVSGSF--DESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSS-SYDGLCRIWD 181 (231)
Q Consensus 105 ~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~v~d 181 (231)
..+.........++++|.+..|+.... .+.|..+++............-.....++++|++..|+.+ +..+.|..+|
T Consensus 115 ~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d 194 (318)
T 3sov_A 115 VLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSN 194 (318)
T ss_dssp EEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEc
Confidence 333333455778899987666665553 5788888886433222222223456889999976666554 4567899999
Q ss_pred CCCCceeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeC
Q psy4391 182 TASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225 (231)
Q Consensus 182 ~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~ 225 (231)
+.... .+.+..........+++..+ ..+.+-...+.|..+|.
T Consensus 195 ~dG~~-~~~~~~~~~~~P~glav~~~-~lywtd~~~~~V~~~~~ 236 (318)
T 3sov_A 195 LDGTN-RQAVVKGSLPHPFALTLFED-ILYWTDWSTHSILACNK 236 (318)
T ss_dssp TTSCS-CEEEECSCCSCEEEEEEETT-EEEEEETTTTEEEEEET
T ss_pred CCCCc-eEEEecCCCCCceEEEEeCC-EEEEEecCCCeEEEEEC
Confidence 86433 33333222223345666533 33344445678888875
No 269
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.59 E-value=0.00014 Score=62.08 Aligned_cols=189 Identities=10% Similarity=0.084 Sum_probs=122.1
Q ss_pred cceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEec--------ccccEEEEEECCCCCEEEEecCCCcEEEEeCC
Q psy4391 28 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG--------HKLGISDVAWSSDSRLLVSGSDDKTLKIWELS 99 (231)
Q Consensus 28 ~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~--------~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~ 99 (231)
..|.++...++|.+. .|+.++-+..|+..++........ ....|.++...++++.|..|+.++-|..||..
T Consensus 357 ~~V~~i~~d~~g~lW-iGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~ 435 (795)
T 4a2l_A 357 NVVSCIVEDKDKNLW-IGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRN 435 (795)
T ss_dssp SSEEEEEECTTSCEE-EEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETT
T ss_pred CeeEEEEECCCCCEE-EEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCC
Confidence 458899988888754 466777888998876654332211 12458888888888745566666678999988
Q ss_pred Cceeeeeec----CCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeecc------CCCCCeEEEEEcCCCCeEE
Q psy4391 100 SGKCLKTLK----GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLP------AHSDPVSAVHFNRDGSLIV 169 (231)
Q Consensus 100 ~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~ 169 (231)
+++...... .....+.++...+++++.+... +.+..||..+++...... .....|.++...++|.+.+
T Consensus 436 ~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~--~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWi 513 (795)
T 4a2l_A 436 SGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL--SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWI 513 (795)
T ss_dssp TCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES--SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEE
T ss_pred CCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec--CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEE
Confidence 765433221 1235688888888888666543 458899988765432211 1235788999998888665
Q ss_pred EEecCCeEEEEeCCCCceeeeeec------CCCCCeEEEEECCCCCEEEEEeCCCeEEEEeC
Q psy4391 170 SSSYDGLCRIWDTASGQCLKTLID------DDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225 (231)
Q Consensus 170 ~~~~dg~i~v~d~~~~~~~~~~~~------~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~ 225 (231)
... +-+..||..+++. .+.. .....+.++..+++|.+.++.. + -+..||.
T Consensus 514 gt~--~Gl~~~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~-~-Gl~~~d~ 569 (795)
T 4a2l_A 514 GGE--EGLSVFKQEGLDI--QKASILPVSNVTKLFTNCIYEASNGIIWVGTR-E-GFYCFNE 569 (795)
T ss_dssp EES--SCEEEEEEETTEE--EECCCSCSCGGGGSCEEEEEECTTSCEEEEES-S-CEEEEET
T ss_pred EeC--CceEEEeCCCCeE--EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC-C-CceeECC
Confidence 544 4577888876654 2211 1223578888899998655443 3 4666664
No 270
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.59 E-value=0.00018 Score=61.40 Aligned_cols=192 Identities=11% Similarity=0.134 Sum_probs=123.3
Q ss_pred cceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEec------ccccEEEEEECCCCCEEEEecCCCcEEEEeCCCc
Q psy4391 28 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG------HKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSG 101 (231)
Q Consensus 28 ~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~~~ 101 (231)
..|.++...++|.+. .|+.++-|..|+..+......... ....|.++...++|... .|+.++-|..|+..++
T Consensus 310 ~~i~~i~~D~~g~lW-igt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lW-iGt~~~Gl~~~~~~~~ 387 (795)
T 4a2l_A 310 RSVRSIFMDSQGGMW-LGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNLW-IGTNDGGLNLYNPITQ 387 (795)
T ss_dssp SCEEEEEECTTSCEE-EEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSCEE-EEESSSCEEEECTTTC
T ss_pred CcEEEEEEeCCcCEE-EEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCCEE-EEECCCCeEEEcCCCC
Confidence 468888888888754 456677788887654433221110 13458888888887754 5666767888998776
Q ss_pred eeeeeecC--------CCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeecc----CCCCCeEEEEEcCCCCeEE
Q psy4391 102 KCLKTLKG--------HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLP----AHSDPVSAVHFNRDGSLIV 169 (231)
Q Consensus 102 ~~~~~~~~--------~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~ 169 (231)
+....... ....|.++..++++++|..|+.++.|..+|.++++...... .....|.++...+++.+.+
T Consensus 388 ~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwi 467 (795)
T 4a2l_A 388 RFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWL 467 (795)
T ss_dssp CEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEE
T ss_pred cEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEE
Confidence 54332211 13568888888888856667777779999988776432211 1245788999888887655
Q ss_pred EEecCCeEEEEeCCCCceeeeeec-----CCCCCeEEEEECCCCCEEEEEeCCCeEEEEeC
Q psy4391 170 SSSYDGLCRIWDTASGQCLKTLID-----DDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225 (231)
Q Consensus 170 ~~~~dg~i~v~d~~~~~~~~~~~~-----~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~ 225 (231)
.. .+ -+..||..+++....... .....|..+..+++|+..+... +-|..||.
T Consensus 468 gt-~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~--~Gl~~~~~ 524 (795)
T 4a2l_A 468 GT-LS-ALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE--EGLSVFKQ 524 (795)
T ss_dssp EE-SS-CEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES--SCEEEEEE
T ss_pred Ee-cC-ceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC--CceEEEeC
Confidence 44 44 478899887654322111 1124578888999998666554 44666664
No 271
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.59 E-value=6.4e-05 Score=58.61 Aligned_cols=190 Identities=7% Similarity=-0.053 Sum_probs=115.6
Q ss_pred EEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEE-EecCCCcEEEEeCCCceeeeeecCC
Q psy4391 32 SVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV-SGSDDKTLKIWELSSGKCLKTLKGH 110 (231)
Q Consensus 32 ~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~~g~i~~~d~~~~~~~~~~~~~ 110 (231)
+.+..+ ..+|+.+ ....|+..+.........+.. ......++|++.+..|+ +-...+.|..+++........+...
T Consensus 81 C~~~~~-~~~l~~~-~~~~I~~i~~~~~~~~~~~~~-~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~ 157 (386)
T 3v65_B 81 CKALGP-EPVLLFA-NRIDIRQVLPHRSEYTLLLNN-LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTG 157 (386)
T ss_dssp EEECSS-CCEEEEE-CBSCEEEECTTSCCCEEEECS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSS
T ss_pred ECCccc-cceeEee-cCccceeeccCCCcEEEEecC-CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCC
Confidence 444444 3344433 345677777765554444433 34578899998666555 4456778999998876543333332
Q ss_pred CcceEEEEECCCCC-EEEEeecCCcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeEEEEe-cC-CeEEEEeCCCCce
Q psy4391 111 SNYVFCCNFNPQSN-LIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSS-YD-GLCRIWDTASGQC 187 (231)
Q Consensus 111 ~~~v~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d-g~i~v~d~~~~~~ 187 (231)
......+++++.+. +.++-...+.|.+.++........+...-.....++++|.+..|+... .. +.|..+++....
T Consensus 158 ~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~- 236 (386)
T 3v65_B 158 LESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG- 236 (386)
T ss_dssp CSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS-
T ss_pred CCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCC-
Confidence 23345677887544 445555677888888875433233333335678999998776665544 33 678888876543
Q ss_pred eeeeecCCCCCeEEEEECCCCCEEEEEeC-CCeEEEEeC
Q psy4391 188 LKTLIDDDNPPVSFVKFSPNGKYILAATL-DNTLKLWDS 225 (231)
Q Consensus 188 ~~~~~~~~~~~i~~~~~s~~g~~l~~~s~-d~~v~vwd~ 225 (231)
...+.......-..++++|++..|+.+.. .++|..+|.
T Consensus 237 ~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~ 275 (386)
T 3v65_B 237 RRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANL 275 (386)
T ss_dssp CEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECT
T ss_pred cEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeC
Confidence 23333222333578999987776666554 568888875
No 272
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.57 E-value=7.7e-06 Score=68.29 Aligned_cols=113 Identities=13% Similarity=0.247 Sum_probs=70.5
Q ss_pred EEEECC-CCCEEEEEeCCC-----------cEEEeecCCCcEEE--EEec-ccccEEEEEECCCCCEEEEecC-CCcEEE
Q psy4391 32 SVKFSP-NGEWLASSSADK-----------LIKIWGAYDGKFEK--TISG-HKLGISDVAWSSDSRLLVSGSD-DKTLKI 95 (231)
Q Consensus 32 ~~~~~~-~~~~l~~~~~dg-----------~i~i~~~~~~~~~~--~~~~-~~~~v~~~~~~~~~~~l~~~~~-~g~i~~ 95 (231)
..++.+ +++.++.|+.+. .+.+||..+++... .+.. +.......++.++++.++.|+. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 456666 888888876542 57889887765322 2221 1222334677788998888884 458999
Q ss_pred EeCCCceeeeeecCCCcc-eEEEEECCCCCEEEEee-cC-----CcEEEEECCCCc
Q psy4391 96 WELSSGKCLKTLKGHSNY-VFCCNFNPQSNLIVSGS-FD-----ESVRIWDVRTGK 144 (231)
Q Consensus 96 ~d~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~-~d-----~~i~v~d~~~~~ 144 (231)
||..+.+....-...... -..+...+++++++.|+ .+ ..+.+||..+.+
T Consensus 270 yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~ 325 (656)
T 1k3i_A 270 YDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKT 325 (656)
T ss_dssp EEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTE
T ss_pred ecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCc
Confidence 999876543221111111 12344567889999988 34 468899987654
No 273
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.56 E-value=9.7e-06 Score=66.53 Aligned_cols=179 Identities=17% Similarity=0.124 Sum_probs=109.9
Q ss_pred EEECCCCCEEEEEeCC----------------CcEEEeecCCCcEEEEEeccc----------ccEEEEEECCCCC---E
Q psy4391 33 VKFSPNGEWLASSSAD----------------KLIKIWGAYDGKFEKTISGHK----------LGISDVAWSSDSR---L 83 (231)
Q Consensus 33 ~~~~~~~~~l~~~~~d----------------g~i~i~~~~~~~~~~~~~~~~----------~~v~~~~~~~~~~---~ 83 (231)
+++.++...++.+..+ +.|..+|..+++....+.... .++. +....+|+ .
T Consensus 240 ~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~ 318 (571)
T 2ad6_A 240 YAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPL 318 (571)
T ss_dssp CEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEE
T ss_pred EEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEE
Confidence 5566666666655432 358888998888776654211 1111 12224664 5
Q ss_pred EEEecCCCcEEEEeCCCceeeeeecCCC-------------cce--------------------------EEEEECCCCC
Q psy4391 84 LVSGSDDKTLKIWELSSGKCLKTLKGHS-------------NYV--------------------------FCCNFNPQSN 124 (231)
Q Consensus 84 l~~~~~~g~i~~~d~~~~~~~~~~~~~~-------------~~v--------------------------~~~~~~~~~~ 124 (231)
++.++.+|.++++|.++++.+...+... .++ ..++++|+..
T Consensus 319 v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g 398 (571)
T 2ad6_A 319 LSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESR 398 (571)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTT
T ss_pred EEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCC
Confidence 6778889999999999988765443211 001 1245677777
Q ss_pred EEEEee-------------------------------------cCCcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCe
Q psy4391 125 LIVSGS-------------------------------------FDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSL 167 (231)
Q Consensus 125 ~l~~~~-------------------------------------~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 167 (231)
+++... .++.|..||+.+++.+.+..... ++....+...+..
T Consensus 399 ~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~-~~~~~~~~t~gg~ 477 (571)
T 2ad6_A 399 TLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKF-AAWGGTLYTKGGL 477 (571)
T ss_dssp EEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESS-CCCSBCEEETTTE
T ss_pred EEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCC-CccceeEEECCCE
Confidence 766653 24789999999998877764322 2222222224567
Q ss_pred EEEEecCCeEEEEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEE
Q psy4391 168 IVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILA 213 (231)
Q Consensus 168 l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~ 213 (231)
++.++.||.++.+|.++++.+-++.........-+.+..+|+.++.
T Consensus 478 v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~~yv~ 523 (571)
T 2ad6_A 478 VWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQYIG 523 (571)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred EEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEECCEEEEE
Confidence 7778999999999999999887765443221122335567764443
No 274
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.56 E-value=1.2e-05 Score=65.89 Aligned_cols=177 Identities=15% Similarity=0.122 Sum_probs=110.8
Q ss_pred CCcEEEeecCCCcEEEEEeccccc-------------------------------------E-EEEEECCCCCEEEEecC
Q psy4391 48 DKLIKIWGAYDGKFEKTISGHKLG-------------------------------------I-SDVAWSSDSRLLVSGSD 89 (231)
Q Consensus 48 dg~i~i~~~~~~~~~~~~~~~~~~-------------------------------------v-~~~~~~~~~~~l~~~~~ 89 (231)
+|.|..+|..+++....+...... + ..+++.++...++.+..
T Consensus 175 ~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g 254 (571)
T 2ad6_A 175 RGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSG 254 (571)
T ss_dssp CCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECC
T ss_pred CCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECC
Confidence 789999999999887665432110 0 12455666566665553
Q ss_pred C----------------CcEEEEeCCCceeeeeecCC----------CcceEEEEECCCCC---EEEEeecCCcEEEEEC
Q psy4391 90 D----------------KTLKIWELSSGKCLKTLKGH----------SNYVFCCNFNPQSN---LIVSGSFDESVRIWDV 140 (231)
Q Consensus 90 ~----------------g~i~~~d~~~~~~~~~~~~~----------~~~v~~~~~~~~~~---~l~~~~~d~~i~v~d~ 140 (231)
+ +.|..+|.++++.+-.++.. ...+ -.....+|+ .++.++.+|.++++|.
T Consensus 255 ~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~-l~~~~~~G~~~~~v~~~~~~G~l~~lD~ 333 (571)
T 2ad6_A 255 NPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMV-LTDQPVNGKMTPLLSHIDRNGILYTLNR 333 (571)
T ss_dssp CCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCE-EEEEEETTEEEEEEEEECTTSEEEEEET
T ss_pred CCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCE-EEecccCCcEEEEEEEeCCCcEEEEEEC
Confidence 2 25889999998876655421 1222 122234663 5777888999999999
Q ss_pred CCCceeeeccCCC-------------CCe--------------------------EEEEEcCCCCeEEEEe---------
Q psy4391 141 RTGKCLKTLPAHS-------------DPV--------------------------SAVHFNRDGSLIVSSS--------- 172 (231)
Q Consensus 141 ~~~~~~~~~~~~~-------------~~v--------------------------~~~~~~~~~~~l~~~~--------- 172 (231)
++|+.+....... .++ ..++++|+..++++..
T Consensus 334 ~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~ 413 (571)
T 2ad6_A 334 ENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEP 413 (571)
T ss_dssp TTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEE
T ss_pred CCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccc
Confidence 9998776543221 111 2357788777776653
Q ss_pred ----------------------------cCCeEEEEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEe
Q psy4391 173 ----------------------------YDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224 (231)
Q Consensus 173 ----------------------------~dg~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd 224 (231)
.+|.+..||+.+++.+-+...... +....+...+..+++++.||.|..||
T Consensus 414 ~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~--~~~~~~~t~gg~v~~g~~dg~l~a~D 491 (571)
T 2ad6_A 414 FMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFA--AWGGTLYTKGGLVWYATLDGYLKALD 491 (571)
T ss_dssp CCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESSC--CCSBCEEETTTEEEEECTTSEEEEEE
T ss_pred cccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCCC--ccceeEEECCCEEEEEcCCCeEEEEE
Confidence 347899999999886655433221 11111222356777789999999999
Q ss_pred CCC
Q psy4391 225 SYP 227 (231)
Q Consensus 225 ~~~ 227 (231)
...
T Consensus 492 ~~t 494 (571)
T 2ad6_A 492 NKD 494 (571)
T ss_dssp TTT
T ss_pred CCC
Confidence 744
No 275
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.53 E-value=3.9e-06 Score=71.16 Aligned_cols=151 Identities=10% Similarity=0.002 Sum_probs=91.6
Q ss_pred cEEEEEEC-CCCCEEEEecC-CC----cEEEEeCCCc-eeeee-ecCCCcceEEEEECCCCCEEEEeecC-----CcEEE
Q psy4391 71 GISDVAWS-SDSRLLVSGSD-DK----TLKIWELSSG-KCLKT-LKGHSNYVFCCNFNPQSNLIVSGSFD-----ESVRI 137 (231)
Q Consensus 71 ~v~~~~~~-~~~~~l~~~~~-~g----~i~~~d~~~~-~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~v 137 (231)
.+...+|+ |||++|+.+.. +| .|+++|+.++ +.+.. +. .....+.|+||++.|+....+ ..|++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence 57788999 99998875433 23 4999999988 63211 11 112356899999888877664 25788
Q ss_pred EECCCCcee--eecc-CCCCCeEEEEEcCCCCeEEEEec---CCeEEEEeCCCCc-ee--eeeecCCCCCeEEEEECCCC
Q psy4391 138 WDVRTGKCL--KTLP-AHSDPVSAVHFNRDGSLIVSSSY---DGLCRIWDTASGQ-CL--KTLIDDDNPPVSFVKFSPNG 208 (231)
Q Consensus 138 ~d~~~~~~~--~~~~-~~~~~v~~~~~~~~~~~l~~~~~---dg~i~v~d~~~~~-~~--~~~~~~~~~~i~~~~~s~~g 208 (231)
+++.+++.. ..+. ........+.|+|||++|+..+. ...|.++|+.++. .. ..+..........+.|+. |
T Consensus 252 ~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~-g 330 (751)
T 2xe4_A 252 HVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHG-T 330 (751)
T ss_dssp EETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEET-T
T ss_pred EECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeee-C
Confidence 888776421 1221 22334567899999998876553 3468888988752 12 333333333444454444 5
Q ss_pred CEEEEEe-CC--C--eEEEEeC
Q psy4391 209 KYILAAT-LD--N--TLKLWDS 225 (231)
Q Consensus 209 ~~l~~~s-~d--~--~v~vwd~ 225 (231)
+.|+..+ .+ + .|..+|.
T Consensus 331 ~~l~~~t~~~~a~~~~L~~~d~ 352 (751)
T 2xe4_A 331 SHLVILTNEGGAVNHKLLIAPR 352 (751)
T ss_dssp TEEEEEECTTTCTTCEEEEEET
T ss_pred CEEEEEeCCCCCCCcEEEEEcC
Confidence 5554444 33 2 5555554
No 276
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.50 E-value=2.2e-05 Score=64.50 Aligned_cols=181 Identities=15% Similarity=0.175 Sum_probs=111.1
Q ss_pred EEEECCCCCEEEEEeC--------------------C----CcEEEeecCCCcEEEEEec--cc--------ccEEEEEE
Q psy4391 32 SVKFSPNGEWLASSSA--------------------D----KLIKIWGAYDGKFEKTISG--HK--------LGISDVAW 77 (231)
Q Consensus 32 ~~~~~~~~~~l~~~~~--------------------d----g~i~i~~~~~~~~~~~~~~--~~--------~~v~~~~~ 77 (231)
..++.|+..+++.+.. | +.|.-+|..+++....+.. |. .++. +..
T Consensus 250 ~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~ 328 (582)
T 1flg_A 250 SASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDY 328 (582)
T ss_dssp CCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEE
T ss_pred CceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-Eee
Confidence 4567777777776552 2 5788999999988776642 21 1111 122
Q ss_pred C-CCCC---EEEEecCCCcEEEEeCCCceeeeeecCCC-------------cc--------------------e------
Q psy4391 78 S-SDSR---LLVSGSDDKTLKIWELSSGKCLKTLKGHS-------------NY--------------------V------ 114 (231)
Q Consensus 78 ~-~~~~---~l~~~~~~g~i~~~d~~~~~~~~~~~~~~-------------~~--------------------v------ 114 (231)
. .+|+ .++.++.+|.++++|.++++.+....... .. .
T Consensus 329 ~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~ 408 (582)
T 1flg_A 329 KAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPF 408 (582)
T ss_dssp ECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCT
T ss_pred ecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCC
Confidence 1 4564 67788999999999999988765443211 00 0
Q ss_pred ------EEEEECCCCCEEEEee---------------------------------cCCcEEEEECCCCceeeeccCCCCC
Q psy4391 115 ------FCCNFNPQSNLIVSGS---------------------------------FDESVRIWDVRTGKCLKTLPAHSDP 155 (231)
Q Consensus 115 ------~~~~~~~~~~~l~~~~---------------------------------~d~~i~v~d~~~~~~~~~~~~~~~~ 155 (231)
..++++|+..+++... .+|.|..||+.+++.+.+..... +
T Consensus 409 ~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~-~ 487 (582)
T 1flg_A 409 LGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHL-P 487 (582)
T ss_dssp TCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESS-C
T ss_pred ccccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCC-C
Confidence 0234566555554432 25789999999998876654322 1
Q ss_pred eEEEEEcCCCCeEEEEecCCeEEEEeCCCCceeeeeecCCCCCeEEEEECCCCC-EEEEE
Q psy4391 156 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK-YILAA 214 (231)
Q Consensus 156 v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~-~l~~~ 214 (231)
...-.....+.+++.++.||.++.||.++++.+-++.........-+.+..+|+ |+++.
T Consensus 488 ~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qYv~~~ 547 (582)
T 1flg_A 488 LWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYLGVT 547 (582)
T ss_dssp CCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEE
T ss_pred CcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEEEEEEE
Confidence 111111123567778999999999999999988776543322112245667786 44443
No 277
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.49 E-value=0.00021 Score=56.00 Aligned_cols=182 Identities=7% Similarity=-0.013 Sum_probs=114.4
Q ss_pred EEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEe-cCCCcEEEEeCCCc----eeeeeecCCCcceE
Q psy4391 41 WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSG-SDDKTLKIWELSSG----KCLKTLKGHSNYVF 115 (231)
Q Consensus 41 ~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~g~i~~~d~~~~----~~~~~~~~~~~~v~ 115 (231)
+|+.+. ...|+..+.........+. ....+..++|++.+..|+.+ ...+.|+.+++... .....+........
T Consensus 85 ~ll~~~-~~~I~~i~l~~~~~~~~~~-~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~ 162 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 162 (400)
T ss_dssp EEEEEE-TTEEEEECTTSCSCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEE
T ss_pred eeEEec-cceeEEEccCCcceeEecc-ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcc
Confidence 444443 4678888876555444443 34567889999866666554 45678888888752 22233333344567
Q ss_pred EEEECCC-CCEEEEeecCCcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeEEEEec--CCeEEEEeCCCCceeeeee
Q psy4391 116 CCNFNPQ-SNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY--DGLCRIWDTASGQCLKTLI 192 (231)
Q Consensus 116 ~~~~~~~-~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~v~d~~~~~~~~~~~ 192 (231)
.+++++. +++.++-...+.|.+.++........+.........++++|.+..|+.... .+.|...++.... ...+.
T Consensus 163 glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~-~~~~~ 241 (400)
T 3p5b_L 163 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLV 241 (400)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCS-CEEEE
T ss_pred cEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCc-cEEEE
Confidence 7888874 455555566788999998765443333333456789999997666665542 3678888886543 33333
Q ss_pred cCCCCCeEEEEECCCCCEEEEEeC-CCeEEEEeC
Q psy4391 193 DDDNPPVSFVKFSPNGKYILAATL-DNTLKLWDS 225 (231)
Q Consensus 193 ~~~~~~i~~~~~s~~g~~l~~~s~-d~~v~vwd~ 225 (231)
...-.....|++++++..|+.+.. .++|..+|.
T Consensus 242 ~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~ 275 (400)
T 3p5b_L 242 TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDV 275 (400)
T ss_dssp CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred ECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeC
Confidence 333234578999988877777654 568888875
No 278
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.48 E-value=7.6e-05 Score=56.34 Aligned_cols=154 Identities=12% Similarity=0.150 Sum_probs=104.8
Q ss_pred EEEEEECCCCCEEEEec-CCCcEEEEeCCCceeee-eecC----C--CcceEEEEE---CCCCCEEEEeec---------
Q psy4391 72 ISDVAWSSDSRLLVSGS-DDKTLKIWELSSGKCLK-TLKG----H--SNYVFCCNF---NPQSNLIVSGSF--------- 131 (231)
Q Consensus 72 v~~~~~~~~~~~l~~~~-~~g~i~~~d~~~~~~~~-~~~~----~--~~~v~~~~~---~~~~~~l~~~~~--------- 131 (231)
..++.|++....+..++ ..+.|..|+...+.... .+.. . ...+..+.+ .|+++++++...
T Consensus 15 PE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~ 94 (334)
T 2p9w_A 15 PEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQ 94 (334)
T ss_dssp CSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSC
T ss_pred CcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccccc
Confidence 34578987555555554 68999999997553322 2221 1 113578899 688888876442
Q ss_pred ----CCcEEEEECC---CCceeeeccC-------------CCCCeEEEEEcCCCCeEEEEecC-CeEEEEeCCCCceeee
Q psy4391 132 ----DESVRIWDVR---TGKCLKTLPA-------------HSDPVSAVHFNRDGSLIVSSSYD-GLCRIWDTASGQCLKT 190 (231)
Q Consensus 132 ----d~~i~v~d~~---~~~~~~~~~~-------------~~~~v~~~~~~~~~~~l~~~~~d-g~i~v~d~~~~~~~~~ 190 (231)
+..|..||+. +++.+..... .......++..++|+..++++.. +.|..++..... +..
T Consensus 95 ~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~-~~~ 173 (334)
T 2p9w_A 95 SSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKT-VST 173 (334)
T ss_dssp CSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCC-EEE
T ss_pred ccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCE-Eee
Confidence 5779999999 7766543321 11247789999999999999988 998888876542 222
Q ss_pred eecC-----CCCCeEEEEECCCCCEEEEEeCCCeEEEEeCC
Q psy4391 191 LIDD-----DNPPVSFVKFSPNGKYILAATLDNTLKLWDSY 226 (231)
Q Consensus 191 ~~~~-----~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~~ 226 (231)
+... .....+.|+++|+|..|++...+|++..+|..
T Consensus 174 ~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~ 214 (334)
T 2p9w_A 174 FAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVS 214 (334)
T ss_dssp EEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECS
T ss_pred eeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCC
Confidence 2211 11225678999999998888779999999953
No 279
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.40 E-value=0.00068 Score=57.71 Aligned_cols=195 Identities=8% Similarity=-0.001 Sum_probs=116.1
Q ss_pred cceEEEEECCCCCEEEE-EeCCCcEEEeecCCC----cEEEEEecccccEEEEEECCCCCEEE-EecCCCcEEEEeCCCc
Q psy4391 28 KAVSSVKFSPNGEWLAS-SSADKLIKIWGAYDG----KFEKTISGHKLGISDVAWSSDSRLLV-SGSDDKTLKIWELSSG 101 (231)
Q Consensus 28 ~~i~~~~~~~~~~~l~~-~~~dg~i~i~~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~~g~i~~~d~~~~ 101 (231)
..+.+++|.+.+..|+. -...+.|+.+++... .....+.........+++.+.++.|+ +-...+.|.+.++...
T Consensus 424 ~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~ 503 (791)
T 3m0c_C 424 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 503 (791)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS
T ss_pred CceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCC
Confidence 45678888886555544 344567777776532 22233332334566788888775554 5556788999998865
Q ss_pred eeeeeecCCCcceEEEEECCCCCEEEEeec--CCcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeEEEE-ecCCeEE
Q psy4391 102 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSF--DESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSS-SYDGLCR 178 (231)
Q Consensus 102 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~ 178 (231)
.....+.........++++|.+..|+.... .+.|...++........+...-.....|++++.+..|+.+ .....|.
T Consensus 504 ~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~ 583 (791)
T 3m0c_C 504 KRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSIS 583 (791)
T ss_dssp SEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred eEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEE
Confidence 544344334455788999998666655543 3679999987544333333333567899999876666655 4457899
Q ss_pred EEeCCCCceeeeeecC--CCCCeEEEEECCCCCEEEEEe-CCCeEEEEeC
Q psy4391 179 IWDTASGQCLKTLIDD--DNPPVSFVKFSPNGKYILAAT-LDNTLKLWDS 225 (231)
Q Consensus 179 v~d~~~~~~~~~~~~~--~~~~i~~~~~s~~g~~l~~~s-~d~~v~vwd~ 225 (231)
.+++.... ...+... .-.....|++. +.+|+.+. ..+.|...|.
T Consensus 584 ~~d~dG~~-~~~v~~~~~~l~~P~glav~--~~~lYwtD~~~~~I~~~dk 630 (791)
T 3m0c_C 584 SIDVNGGN-RKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANR 630 (791)
T ss_dssp EEETTSCS-CEEEEECTTTTSSEEEEEEE--TTEEEEEETTTTEEEEEET
T ss_pred EEecCCCc-eEEEecCCCccCCCCEEEEe--CCEEEEEECCCCEEEEEeC
Confidence 99986543 3333322 11222345553 33455444 4567776663
No 280
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.39 E-value=4.3e-05 Score=62.96 Aligned_cols=181 Identities=14% Similarity=0.132 Sum_probs=108.9
Q ss_pred EEECCCCCEEEEEeCC----------------CcEEEeecCCCcEEEEEecccc----------cEEEEEEC-CCC---C
Q psy4391 33 VKFSPNGEWLASSSAD----------------KLIKIWGAYDGKFEKTISGHKL----------GISDVAWS-SDS---R 82 (231)
Q Consensus 33 ~~~~~~~~~l~~~~~d----------------g~i~i~~~~~~~~~~~~~~~~~----------~v~~~~~~-~~~---~ 82 (231)
.++.++..+++.+..+ +.|.-+|..+++....+..... ++. +... .+| .
T Consensus 246 ~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~ 324 (599)
T 1w6s_A 246 YAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARK 324 (599)
T ss_dssp CEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEE
T ss_pred eeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEE
Confidence 4566677777766544 3788889998887766543211 111 1221 456 4
Q ss_pred EEEEecCCCcEEEEeCCCceeeeeecCCC-------------cce--------------------------EEEEECCCC
Q psy4391 83 LLVSGSDDKTLKIWELSSGKCLKTLKGHS-------------NYV--------------------------FCCNFNPQS 123 (231)
Q Consensus 83 ~l~~~~~~g~i~~~d~~~~~~~~~~~~~~-------------~~v--------------------------~~~~~~~~~ 123 (231)
.++.++.+|.++++|.++++.+....... ..+ ..++++|+.
T Consensus 325 ~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~ 404 (599)
T 1w6s_A 325 LLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKR 404 (599)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTT
T ss_pred EEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCC
Confidence 57778899999999999988765443110 000 123456655
Q ss_pred CEEEEee---------------------------------------cCCcEEEEECCCCceeeeccCCCCCeEEEEEcCC
Q psy4391 124 NLIVSGS---------------------------------------FDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRD 164 (231)
Q Consensus 124 ~~l~~~~---------------------------------------~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~ 164 (231)
.+++... ..|.|..||+.+++.+....... +...-...-.
T Consensus 405 ~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~ta 483 (599)
T 1w6s_A 405 ELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKMERF-AVWGGTMATA 483 (599)
T ss_dssp TEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEESS-CCCSBCEEET
T ss_pred CEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecCCC-CccCcceEec
Confidence 5554421 34679999999998877654221 1111111224
Q ss_pred CCeEEEEecCCeEEEEeCCCCceeeeeecCCCCCeEEEEECCCCC-EEEEEe
Q psy4391 165 GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK-YILAAT 215 (231)
Q Consensus 165 ~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~-~l~~~s 215 (231)
+.+++.++.||.++.||.++++.+-++.........-+.+..+|+ |+++.+
T Consensus 484 gg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~y~~~G~qyv~~~~ 535 (599)
T 1w6s_A 484 GDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGTQYVAIYY 535 (599)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEeccEEEEeCCEEEEEEEc
Confidence 667777999999999999999987766433222112244556776 454433
No 281
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.39 E-value=5.2e-05 Score=60.04 Aligned_cols=153 Identities=9% Similarity=0.096 Sum_probs=92.5
Q ss_pred EEEEEECCC--CCEEEEecCCCcEEEEeCCCceeeeeecCCCcceEEEEECCCCCEEEEeecC---C-cEEEEECCCCce
Q psy4391 72 ISDVAWSSD--SRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD---E-SVRIWDVRTGKC 145 (231)
Q Consensus 72 v~~~~~~~~--~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~-~i~v~d~~~~~~ 145 (231)
...++|+|+ +..|+.+...+.|+.+|..+++...... .......++++++++++++.... . .+..++...+..
T Consensus 141 P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~-~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~ 219 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTT-NIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFT 219 (433)
T ss_dssp CCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECC-CCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTC
T ss_pred CceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeec-CCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCee
Confidence 567899984 4445555444899999998776554433 44557889999999955544321 1 133333222111
Q ss_pred e-eeccCCCCCeEEEEEcC-CCCeEEEEecCCeEEEEeCCCCceeeeeecC-CCCCeEEEEECCCCCEEEEEe-CCCeEE
Q psy4391 146 L-KTLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTASGQCLKTLIDD-DNPPVSFVKFSPNGKYILAAT-LDNTLK 221 (231)
Q Consensus 146 ~-~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~-~~~~i~~~~~s~~g~~l~~~s-~d~~v~ 221 (231)
. ..+. .......++++| ++.++++-..++.|+.+|..++.....+... ....-..++|+|+|++|+.+. ..++|.
T Consensus 220 ~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~ 298 (433)
T 4hw6_A 220 ERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIY 298 (433)
T ss_dssp CEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEE
T ss_pred cccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEE
Confidence 0 1111 122345678899 6666666666789999999877652333222 222234699999999666555 467999
Q ss_pred EEeCC
Q psy4391 222 LWDSY 226 (231)
Q Consensus 222 vwd~~ 226 (231)
.++..
T Consensus 299 ~~~~d 303 (433)
T 4hw6_A 299 RVDYN 303 (433)
T ss_dssp EEEBC
T ss_pred EEeCC
Confidence 97743
No 282
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.37 E-value=0.00031 Score=53.22 Aligned_cols=163 Identities=7% Similarity=-0.046 Sum_probs=99.6
Q ss_pred ceEEEEECCCCCEEE-EEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEec--CCCcEEEEeCCCceeee
Q psy4391 29 AVSSVKFSPNGEWLA-SSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGS--DDKTLKIWELSSGKCLK 105 (231)
Q Consensus 29 ~i~~~~~~~~~~~l~-~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~g~i~~~d~~~~~~~~ 105 (231)
....+++.+.+..|+ +-...+.|.+++.........+.........+++.|.+..|+.+. ..+.|...+++......
T Consensus 80 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~ 159 (318)
T 3sov_A 80 SPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFI 159 (318)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEE
T ss_pred CccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEE
Confidence 345677876555444 444567888888754433333333445578899998766666554 35788888876433322
Q ss_pred eecCCCcceEEEEECCCCCEEEEe-ecCCcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeEEEEecCCeEEEEeCCC
Q psy4391 106 TLKGHSNYVFCCNFNPQSNLIVSG-SFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 184 (231)
Q Consensus 106 ~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~ 184 (231)
.+...-.....+++++++..|+.+ ...+.|..+|+..................+++.. +..+.+-...+.|..++..+
T Consensus 160 ~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~-~~lywtd~~~~~V~~~~~~~ 238 (318)
T 3sov_A 160 IINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFE-DILYWTDWSTHSILACNKYT 238 (318)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEET-TEEEEEETTTTEEEEEETTT
T ss_pred EEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeC-CEEEEEecCCCeEEEEECCC
Confidence 333333456789999976666555 4567899999874332222222334556777753 34455555678899999877
Q ss_pred Cceeeeee
Q psy4391 185 GQCLKTLI 192 (231)
Q Consensus 185 ~~~~~~~~ 192 (231)
++....+.
T Consensus 239 G~~~~~i~ 246 (318)
T 3sov_A 239 GEGLREIH 246 (318)
T ss_dssp CCSCEEEE
T ss_pred CCceEEEe
Confidence 76555543
No 283
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.37 E-value=0.00036 Score=53.05 Aligned_cols=189 Identities=12% Similarity=0.079 Sum_probs=106.1
Q ss_pred ceEEEEECCCCCEEEEEeCCCcEEEeecCCC-cEEEEEecccccEEEEEECCCCCEEEEecCCCcEEEEeC--CCceeee
Q psy4391 29 AVSSVKFSPNGEWLASSSADKLIKIWGAYDG-KFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWEL--SSGKCLK 105 (231)
Q Consensus 29 ~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~--~~~~~~~ 105 (231)
.+..+.+.+++..++++ .+|.+..- ...+ ............+..+.+.+++..++++...+..+-.|- .+.+.+.
T Consensus 123 ~~~~i~~~~~~~~~~~~-~~g~v~~S-~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~ 200 (327)
T 2xbg_A 123 SPRLIKALGNGSAEMIT-NVGAIYRT-KDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHN 200 (327)
T ss_dssp CEEEEEEEETTEEEEEE-TTCCEEEE-SSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEE
T ss_pred CeEEEEEECCCCEEEEe-CCccEEEE-cCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECC
Confidence 45677776666655554 45544321 1123 233333334456888999998887766654433344442 2223221
Q ss_pred eecCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeeccC----CCCCeEEEEEcCCCCeEEEEecCCeEEEEe
Q psy4391 106 TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPA----HSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181 (231)
Q Consensus 106 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d 181 (231)
......+..+.+.+++.+++ .+.+|.+.+.+...++.-..+.. ....+.++.+.+++..++++. +|.+ .+.
T Consensus 201 --~~~~~~~~~~~~~~~g~~~~-~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~S 275 (327)
T 2xbg_A 201 --RTTSRRLHNMGFTPDGRLWM-IVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL-LCS 275 (327)
T ss_dssp --CCSSSCEEEEEECTTSCEEE-EETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE-EEE
T ss_pred --CCCCCccceeEECCCCCEEE-EeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeE-EEe
Confidence 12334577788888887664 45567777764332333222221 223578899998877666654 6666 344
Q ss_pred CCCCceeeeeecC--CCCCeEEEEECCCCCEEEEEeCCCeEEEEeC
Q psy4391 182 TASGQCLKTLIDD--DNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225 (231)
Q Consensus 182 ~~~~~~~~~~~~~--~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~ 225 (231)
...++....+... ....+..+.|.++++ +++++.+|.|.-++.
T Consensus 276 ~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 276 QDGGQTWQQDVDVKKVPSNFYKILFFSPDQ-GFILGQKGILLRYVT 320 (327)
T ss_dssp SSTTSSCEECGGGTTSSSCCCEEEEEETTE-EEEECSTTEEEEECC
T ss_pred CCCCcccEEcCccCCCCCCeEEEEEECCCc-eEEEcCCceEEEEcC
Confidence 4555544433321 123466777876555 556667898887764
No 284
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.37 E-value=0.00048 Score=58.64 Aligned_cols=189 Identities=12% Similarity=0.123 Sum_probs=115.9
Q ss_pred cceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEe--cccccEEEEEECCCCCEEEEecCCCcEEEEeCCCceeee
Q psy4391 28 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS--GHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLK 105 (231)
Q Consensus 28 ~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~ 105 (231)
..|.++...++|.+.+ |+.++.+..++..+++...... .....|.++...+++...+.. . +-+..||..+++...
T Consensus 407 ~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt-~-~Gl~~~~~~~~~~~~ 483 (781)
T 3v9f_A 407 NSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGT-H-AGVFVIDLASKKVIH 483 (781)
T ss_dssp SBEEEEEECTTSCEEE-EETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEE-T-TEEEEEESSSSSCCE
T ss_pred cceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEE-C-CceEEEeCCCCeEEe
Confidence 4578888887777554 5666678888876654432211 123468888888887755444 4 458888987765433
Q ss_pred eecCC-----CcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeecc---CCCCCeEEEEEcCCCCeEEEEecCCeE
Q psy4391 106 TLKGH-----SNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLP---AHSDPVSAVHFNRDGSLIVSSSYDGLC 177 (231)
Q Consensus 106 ~~~~~-----~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~dg~i 177 (231)
..... ...+.++..+++|.+.+. +.++-+..||.++++...... .....|.++...++|.+.++. .+|.+
T Consensus 484 ~~~~~~~~~~~~~i~~i~~d~~g~lWig-t~~~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T-~~Glv 561 (781)
T 3v9f_A 484 HYDTSNSQLLENFVRSIAQDSEGRFWIG-TFGGGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLAT-GEGLV 561 (781)
T ss_dssp EECTTTSSCSCSCEEEEEECTTCCEEEE-ESSSCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEE-TTEEE
T ss_pred cccCcccccccceeEEEEEcCCCCEEEE-EcCCCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEE-CCCce
Confidence 22211 356888888888887664 443447788887665322211 123468889888888865544 46665
Q ss_pred EEEeCCCCceeeeeecC---CCCCeEEEEECCCCCEEEEEeCCCeEEEEe
Q psy4391 178 RIWDTASGQCLKTLIDD---DNPPVSFVKFSPNGKYILAATLDNTLKLWD 224 (231)
Q Consensus 178 ~v~d~~~~~~~~~~~~~---~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd 224 (231)
..||..+++.. .+... ....+.++..+++|.+.++ +.+| |..||
T Consensus 562 ~~~d~~~~~~~-~~~~~~gl~~~~i~~i~~d~~g~lW~~-t~~G-l~~~~ 608 (781)
T 3v9f_A 562 CFPSARNFDYQ-VFQRKEGLPNTHIRAISEDKNGNIWAS-TNTG-ISCYI 608 (781)
T ss_dssp EESCTTTCCCE-EECGGGTCSCCCCCEEEECSSSCEEEE-CSSC-EEEEE
T ss_pred EEECCCCCcEE-EccccCCCCCceEEEEEECCCCCEEEE-cCCc-eEEEE
Confidence 88888776532 22211 1234677888888876554 4444 44444
No 285
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.36 E-value=5.7e-06 Score=69.51 Aligned_cols=195 Identities=9% Similarity=0.013 Sum_probs=108.1
Q ss_pred ceEEEEECCCCCEEEEEe-CCCcEEEeecCC----CcEEEEEecccccEEEEEECCCCCEE-EEecCCCcEEEEeCCCce
Q psy4391 29 AVSSVKFSPNGEWLASSS-ADKLIKIWGAYD----GKFEKTISGHKLGISDVAWSSDSRLL-VSGSDDKTLKIWELSSGK 102 (231)
Q Consensus 29 ~i~~~~~~~~~~~l~~~~-~dg~i~i~~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~~g~i~~~d~~~~~ 102 (231)
.+..++|++.+..|+.+. ..+.|+.++... ......+.........+++.+.+..| ++-...+.|.++++....
T Consensus 407 ~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~ 486 (699)
T 1n7d_A 407 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK 486 (699)
T ss_dssp TCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCC
T ss_pred ceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCc
Confidence 456788988777666543 457888887754 11111121112234567887544444 444567889999987654
Q ss_pred eeeeecCCCcceEEEEECCCCCEEEEeec--CCcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeEE-EEecCCeEEE
Q psy4391 103 CLKTLKGHSNYVFCCNFNPQSNLIVSGSF--DESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIV-SSSYDGLCRI 179 (231)
Q Consensus 103 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~v 179 (231)
....+.........++++|.+..|+.... .+.|.++++........+...-.....|+++|++..|+ +-+..+.|.+
T Consensus 487 ~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~ 566 (699)
T 1n7d_A 487 RKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISS 566 (699)
T ss_dssp EEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEE
T ss_pred eEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEE
Confidence 43333322334567889987665555443 26788887754322111112223456789998766555 4455678999
Q ss_pred EeCCCCceeeeeecC--CCCCeEEEEECCCCCEEEEEeCCCeEEEEeC
Q psy4391 180 WDTASGQCLKTLIDD--DNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225 (231)
Q Consensus 180 ~d~~~~~~~~~~~~~--~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~ 225 (231)
+++.... ...+... .......|++..+ .++++....++|..+|.
T Consensus 567 ~d~dG~~-~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~ 612 (699)
T 1n7d_A 567 IDVNGGN-RKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANR 612 (699)
T ss_dssp ECSSSSC-CEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEET
T ss_pred EccCCCc-eEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEc
Confidence 9986433 2333221 1111123455443 33333444678888875
No 286
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.36 E-value=0.00042 Score=59.00 Aligned_cols=191 Identities=12% Similarity=0.063 Sum_probs=117.8
Q ss_pred cceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEE---ecccccEEEEEECCCCCEEEEecCCCcEEEEeCCCceee
Q psy4391 28 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI---SGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCL 104 (231)
Q Consensus 28 ~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~ 104 (231)
..|.++...++|.+. .|+.++-+..|+..++...... ......|.++...+++...+ |+.++-+..++..+++..
T Consensus 363 ~~v~~i~~d~~g~lW-igt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~ 440 (781)
T 3v9f_A 363 KVVSSVCDDGQGKLW-IGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQ 440 (781)
T ss_dssp SCEEEEEECTTSCEE-EEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEEE
T ss_pred cceEEEEEcCCCCEE-EEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEE
Confidence 458888888877754 4455666888886543221110 11234588888887777554 555567888898776543
Q ss_pred eeec--CCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeeccCC-----CCCeEEEEEcCCCCeEEEEecCCeE
Q psy4391 105 KTLK--GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAH-----SDPVSAVHFNRDGSLIVSSSYDGLC 177 (231)
Q Consensus 105 ~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~dg~i 177 (231)
.... .....+.++...+++.+.+. +. +.|..+|..+++........ ...|.++...++|.+.+ |+.++-+
T Consensus 441 ~~~~~~~~~~~v~~i~~d~~g~lwig-t~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWi-gt~~~Gl 517 (781)
T 3v9f_A 441 IIELEKNELLDVRVFYEDKNKKIWIG-TH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWI-GTFGGGV 517 (781)
T ss_dssp ECCSTTTCCCCEEEEEECTTSEEEEE-ET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEE-EESSSCE
T ss_pred EeccCCCCCCeEEEEEECCCCCEEEE-EC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEE-EEcCCCE
Confidence 3221 13456888888888776554 44 56889998876543222111 35788999988887655 4443447
Q ss_pred EEEeCCCCceeeeeecC---CCCCeEEEEECCCCCEEEEEeCCCeEEEEeC
Q psy4391 178 RIWDTASGQCLKTLIDD---DNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225 (231)
Q Consensus 178 ~v~d~~~~~~~~~~~~~---~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~ 225 (231)
..+|..+++.. .+... ....|.++..+++|.+.++. .+|-|..||.
T Consensus 518 ~~~~~~~~~~~-~~~~~~~l~~~~i~~i~~d~~g~lWi~T-~~Glv~~~d~ 566 (781)
T 3v9f_A 518 GIYTPDMQLVR-KFNQYEGFCSNTINQIYRSSKGQMWLAT-GEGLVCFPSA 566 (781)
T ss_dssp EEECTTCCEEE-EECTTTTCSCSCEEEEEECTTSCEEEEE-TTEEEEESCT
T ss_pred EEEeCCCCeEE-EccCCCCCCCCeeEEEEECCCCCEEEEE-CCCceEEECC
Confidence 77888766532 22211 13357888888998865544 4665477764
No 287
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.36 E-value=0.0002 Score=58.91 Aligned_cols=134 Identities=17% Similarity=0.217 Sum_probs=83.2
Q ss_pred CcEEEEeCCCceeeeeecC--CC--------cceEEEEEC-CCCC---EEEEeecCCcEEEEECCCCceeeeccCCC---
Q psy4391 91 KTLKIWELSSGKCLKTLKG--HS--------NYVFCCNFN-PQSN---LIVSGSFDESVRIWDVRTGKCLKTLPAHS--- 153 (231)
Q Consensus 91 g~i~~~d~~~~~~~~~~~~--~~--------~~v~~~~~~-~~~~---~l~~~~~d~~i~v~d~~~~~~~~~~~~~~--- 153 (231)
+.|..+|.++++.+-.++. +. ..+. .... .+|+ .++.++.+|.++++|.++|+.+.......
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~ 369 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNIT 369 (582)
T ss_dssp SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCC
T ss_pred ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCcc
Confidence 5799999999987766542 21 1222 2221 4563 78888999999999999998775543221
Q ss_pred ----------CCe--------------------------------EEEEEcCCCCeEEEEe-------------------
Q psy4391 154 ----------DPV--------------------------------SAVHFNRDGSLIVSSS------------------- 172 (231)
Q Consensus 154 ----------~~v--------------------------------~~~~~~~~~~~l~~~~------------------- 172 (231)
.++ ..++++|+...+++..
T Consensus 370 ~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~ 449 (582)
T 1flg_A 370 WASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSA 449 (582)
T ss_dssp SEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSC
T ss_pred ccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCc
Confidence 000 1346677655555432
Q ss_pred --------------cCCeEEEEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCC
Q psy4391 173 --------------YDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSYP 227 (231)
Q Consensus 173 --------------~dg~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~~~ 227 (231)
.+|.|..||+.+++.+=+..... +...-.....+..++.++.||.++.||...
T Consensus 450 ~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~--~~~~g~~~tagglvf~g~~dg~l~A~D~~t 516 (582)
T 1flg_A 450 YLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHL--PLWAGVLATAGNLVFTGTGDGYFKAFDAKS 516 (582)
T ss_dssp CCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESS--CCCSCCEEETTTEEEEECTTSEEEEEETTT
T ss_pred eeccceeecCCCCCCcceEEEEECCCCCEEEEecCCC--CCcccceEeCCCEEEEECCCCcEEEEECCC
Confidence 25789999999998654433221 111111112356788899999999999743
No 288
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=98.34 E-value=0.00015 Score=56.48 Aligned_cols=149 Identities=15% Similarity=0.197 Sum_probs=96.7
Q ss_pred CCCCEEEEecCCCcEEEEeCCCceeeeeecCC----CcceEEEEECCCCCEEEEeecCCcEEEEECCCCce---------
Q psy4391 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGH----SNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC--------- 145 (231)
Q Consensus 79 ~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~--------- 145 (231)
.+|..++.+- ++.||..++......+.++.. -..+..+..+|+|++||..+. ..|.|..+..+..
T Consensus 30 ~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~ 107 (452)
T 3pbp_A 30 QNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQD 107 (452)
T ss_dssp TTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHHH
T ss_pred cCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecC-CeEEEEEecCccccCccccccc
Confidence 3444454443 367787777643333333332 224677899999999998765 5788988873321
Q ss_pred ---eeeccC------CCCCeEEEEEcCC---CCeEEEEecCCeEEEEeCCCCceee-eee------c--CCCCCeEEEEE
Q psy4391 146 ---LKTLPA------HSDPVSAVHFNRD---GSLIVSSSYDGLCRIWDTASGQCLK-TLI------D--DDNPPVSFVKF 204 (231)
Q Consensus 146 ---~~~~~~------~~~~v~~~~~~~~---~~~l~~~~~dg~i~v~d~~~~~~~~-~~~------~--~~~~~i~~~~~ 204 (231)
.+.+.. ...+|..+.|+|- +..|++-..|+.|++||+....... .+. . .....+.+++|
T Consensus 108 ~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~F 187 (452)
T 3pbp_A 108 AFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEF 187 (452)
T ss_dssp TTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEE
T ss_pred ccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEE
Confidence 111111 2467999999994 5689999999999999998632111 110 0 11145788999
Q ss_pred CCCCCEEEEEe--CCCeEEEEeCCCCCCC
Q psy4391 205 SPNGKYILAAT--LDNTLKLWDSYPCLPK 231 (231)
Q Consensus 205 s~~g~~l~~~s--~d~~v~vwd~~~~~~~ 231 (231)
.++|=.|.+.+ .+|. ||-.+|+||.
T Consensus 188 g~~~lTLYvl~~t~~GD--IYAlcP~LP~ 214 (452)
T 3pbp_A 188 SKDGLTLYCLNTTEGGD--IFAFYPFLPS 214 (452)
T ss_dssp CTTSSCEEEEECTTSCE--EEEESSCCCS
T ss_pred cCCCcEEEEEecCCCCC--EEEECCCCcc
Confidence 99887777755 5555 7888999994
No 289
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.31 E-value=0.00016 Score=52.91 Aligned_cols=160 Identities=13% Similarity=0.152 Sum_probs=98.8
Q ss_pred EecccccEEEEEECCCCCEEE-EecCCCcEEEEeCCCceeeeeecC-CCcceEEEEECCCCCEEEEeecCCcEEEEECCC
Q psy4391 65 ISGHKLGISDVAWSSDSRLLV-SGSDDKTLKIWELSSGKCLKTLKG-HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 142 (231)
Q Consensus 65 ~~~~~~~v~~~~~~~~~~~l~-~~~~~g~i~~~d~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~ 142 (231)
+.+-...+..++|+|++..|+ +...++.|...|.. ++..+.+.- .....-.+++.+++.++++.-.++.+.++++..
T Consensus 22 l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~ 100 (255)
T 3qqz_A 22 IAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTP 100 (255)
T ss_dssp CTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECT
T ss_pred CCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCC
Confidence 344445789999999876654 56678889999988 776666532 123466788888888767666677888888765
Q ss_pred Cce---eeecc------CCCCCeEEEEEcCCCCeEEEEecCCeEEEEeCC---CCceeeeee------cCCCCCeEEEEE
Q psy4391 143 GKC---LKTLP------AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA---SGQCLKTLI------DDDNPPVSFVKF 204 (231)
Q Consensus 143 ~~~---~~~~~------~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~---~~~~~~~~~------~~~~~~i~~~~~ 204 (231)
... +.... ........++++|.+..|+++.......+|... ....+..+. ......+..+++
T Consensus 101 ~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~ 180 (255)
T 3qqz_A 101 NSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEF 180 (255)
T ss_dssp TCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEE
T ss_pred CCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEE
Confidence 432 11111 123456899999998777776655444444432 111111110 011223567888
Q ss_pred CCCCC-EEEEEeCCCeEEEEeC
Q psy4391 205 SPNGK-YILAATLDNTLKLWDS 225 (231)
Q Consensus 205 s~~g~-~l~~~s~d~~v~vwd~ 225 (231)
+|... +++.....+.+.++|.
T Consensus 181 dp~tg~lliLS~~s~~L~~~d~ 202 (255)
T 3qqz_A 181 NQQKNTLLVLSHESRALQEVTL 202 (255)
T ss_dssp ETTTTEEEEEETTTTEEEEECT
T ss_pred cCCCCeEEEEECCCCeEEEEcC
Confidence 88654 4455555667777775
No 290
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.28 E-value=0.0013 Score=55.94 Aligned_cols=176 Identities=6% Similarity=-0.037 Sum_probs=108.3
Q ss_pred CCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEE-EecCCCcEEEEeCCCc----eeeeeecCCCcceEEEEECCC
Q psy4391 48 DKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV-SGSDDKTLKIWELSSG----KCLKTLKGHSNYVFCCNFNPQ 122 (231)
Q Consensus 48 dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~~g~i~~~d~~~~----~~~~~~~~~~~~v~~~~~~~~ 122 (231)
...|+..++........+.. ...+..++|++....|+ +-...+.|+.+++... .....+.........+++++.
T Consensus 403 ~~~Ir~i~l~~~~~~~l~~~-~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~ 481 (791)
T 3m0c_C 403 RHEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 481 (791)
T ss_dssp BSSEEEECTTSCCCEEEECS-CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETT
T ss_pred ccceeEeeccCCcceeeecC-CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeec
Confidence 45677777765544444433 44577899998655554 4455678888888752 222333323344567888877
Q ss_pred CCE-EEEeecCCcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeEEEEec--CCeEEEEeCCCCceeeeeecCCCCCe
Q psy4391 123 SNL-IVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY--DGLCRIWDTASGQCLKTLIDDDNPPV 199 (231)
Q Consensus 123 ~~~-l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~v~d~~~~~~~~~~~~~~~~~i 199 (231)
+.. +++-...+.|.+.++........+...-.....|+++|.+..|+.... .+.|...++.... ...+....-...
T Consensus 482 ~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~-~~~lv~~~l~~P 560 (791)
T 3m0c_C 482 HSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLVTENIQWP 560 (791)
T ss_dssp TTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC-EEEEECSSCSCE
T ss_pred CCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCc-eEEEEeCCCCCc
Confidence 654 445556788999999755433333333446789999997666665543 2678888886543 334433333345
Q ss_pred EEEEECCCCCEEEEEeC-CCeEEEEeC
Q psy4391 200 SFVKFSPNGKYILAATL-DNTLKLWDS 225 (231)
Q Consensus 200 ~~~~~s~~g~~l~~~s~-d~~v~vwd~ 225 (231)
..|++++.+..|+.+.. .++|..+|.
T Consensus 561 ~GLavD~~~~~LYwaD~~~~~I~~~d~ 587 (791)
T 3m0c_C 561 NGITLDLLSGRLYWVDSKLHSISSIDV 587 (791)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred eEEEEecCCCeEEEEeCCCCcEEEEec
Confidence 77999987777776654 457888775
No 291
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.28 E-value=0.00038 Score=55.76 Aligned_cols=195 Identities=13% Similarity=0.149 Sum_probs=111.7
Q ss_pred eEEEEECC-CCCEEEEEe-CCCcEEEeecCCCcEEEEEecc---cccEEEEEE-------CCCCCEEEEecCCC------
Q psy4391 30 VSSVKFSP-NGEWLASSS-ADKLIKIWGAYDGKFEKTISGH---KLGISDVAW-------SSDSRLLVSGSDDK------ 91 (231)
Q Consensus 30 i~~~~~~~-~~~~l~~~~-~dg~i~i~~~~~~~~~~~~~~~---~~~v~~~~~-------~~~~~~l~~~~~~g------ 91 (231)
...++|+| ++..|+.+. ..+.|++.|..++.....+... ......++| ++++++|+++...+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~ 220 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDES 220 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGE
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccC
Confidence 56889998 355555444 3467888888766655444332 224788999 99999666665543
Q ss_pred -cEEEEeCCC-ceee-----eeecCCCcceEEEEECCC-CCEEEEeecCCcEEEEECC-------CCce-----------
Q psy4391 92 -TLKIWELSS-GKCL-----KTLKGHSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVR-------TGKC----------- 145 (231)
Q Consensus 92 -~i~~~d~~~-~~~~-----~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~v~d~~-------~~~~----------- 145 (231)
.+.+++... +... ..+.. ......++++|+ +.++++-..++.|..+|+. ++..
T Consensus 221 ~~V~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~ 299 (496)
T 3kya_A 221 PSVYIIKRNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNT 299 (496)
T ss_dssp EEEEEEECCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTT
T ss_pred ceEEEEecCCCCceeecccceeecc-CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccc
Confidence 255665333 1211 12211 112335678895 5555566677889999987 4543
Q ss_pred eee-cc-CCCCCeEEEEEcCCCCeEEE-EecCCeEEEEeC--CCCcee--eeeecC-------C--------CCCeEEEE
Q psy4391 146 LKT-LP-AHSDPVSAVHFNRDGSLIVS-SSYDGLCRIWDT--ASGQCL--KTLIDD-------D--------NPPVSFVK 203 (231)
Q Consensus 146 ~~~-~~-~~~~~v~~~~~~~~~~~l~~-~~~dg~i~v~d~--~~~~~~--~~~~~~-------~--------~~~i~~~~ 203 (231)
... +. ........++|+|++++|+. -+....|+.++. ..+... ..+... + ..|-..++
T Consensus 300 ~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~ 379 (496)
T 3kya_A 300 FKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVF 379 (496)
T ss_dssp EEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEE
T ss_pred cceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEE
Confidence 111 11 12234678999999996544 455678888654 333210 112111 0 11221345
Q ss_pred EC-------CCCCEEEEEeCCCeEEEEeC
Q psy4391 204 FS-------PNGKYILAATLDNTLKLWDS 225 (231)
Q Consensus 204 ~s-------~~g~~l~~~s~d~~v~vwd~ 225 (231)
.. ++|.++++=+..++|+.++.
T Consensus 380 vd~~~~~~~~~g~lyVaD~~N~rIr~i~~ 408 (496)
T 3kya_A 380 VKNPDYTGEEEYDFYFVDRLNFCVRKVTP 408 (496)
T ss_dssp EECTTCCSSCCEEEEEEEGGGTEEEEECT
T ss_pred EccccccccCCCeEEEEECCCCEEEEEeC
Confidence 54 56666666666789999884
No 292
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.26 E-value=0.00016 Score=59.53 Aligned_cols=186 Identities=10% Similarity=0.027 Sum_probs=115.1
Q ss_pred CCEEEEEeC-CCcEEEeec-CCCcEEEEEecccc-----------cEEEEEECCCCCE----EEEecCCCcEEEEeCCCc
Q psy4391 39 GEWLASSSA-DKLIKIWGA-YDGKFEKTISGHKL-----------GISDVAWSSDSRL----LVSGSDDKTLKIWELSSG 101 (231)
Q Consensus 39 ~~~l~~~~~-dg~i~i~~~-~~~~~~~~~~~~~~-----------~v~~~~~~~~~~~----l~~~~~~g~i~~~d~~~~ 101 (231)
+..++.++. ++.|.-+|. .+++..-....... ....++..|.+.. ++.++.++.+..+|.+++
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG 141 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG 141 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence 556667777 889999999 89987766543211 0122344344444 788888999999999999
Q ss_pred eeeeeecCCCc----ceEE-EEECCCCCEEEEee------cCCcEEEEECCCCceeeeccCCCCC---------------
Q psy4391 102 KCLKTLKGHSN----YVFC-CNFNPQSNLIVSGS------FDESVRIWDVRTGKCLKTLPAHSDP--------------- 155 (231)
Q Consensus 102 ~~~~~~~~~~~----~v~~-~~~~~~~~~l~~~~------~d~~i~v~d~~~~~~~~~~~~~~~~--------------- 155 (231)
+.+-....... .+.. ..+. ++ .++.++ .++.|+.+|.++|+.+..+......
T Consensus 142 ~~~W~~~~~~~~~~~~~~ssP~v~-~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~ 219 (599)
T 1w6s_A 142 ETVWKVENSDIKVGSTLTIAPYVV-KD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPH 219 (599)
T ss_dssp CEEEEEECCCGGGTCBCCSCCEEE-TT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGG
T ss_pred CEEEeecCCCCCccceeecCCEEE-CC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccccccccccc
Confidence 87655432210 1110 0111 33 455554 3789999999999987665432110
Q ss_pred ----------------------e-EEEEEcCCCCeEEEEecC----------------CeEEEEeCCCCceeeeeecCCC
Q psy4391 156 ----------------------V-SAVHFNRDGSLIVSSSYD----------------GLCRIWDTASGQCLKTLIDDDN 196 (231)
Q Consensus 156 ----------------------v-~~~~~~~~~~~l~~~~~d----------------g~i~v~d~~~~~~~~~~~~~~~ 196 (231)
+ ..+++.++...++.+..+ +.|..+|+.+++.+=.+.....
T Consensus 220 ~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~ 299 (599)
T 1w6s_A 220 YGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPH 299 (599)
T ss_dssp GCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTT
T ss_pred ccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCC
Confidence 0 134566777777776654 3789999999987654433211
Q ss_pred ---------CCeEEEEEC-CCC---CEEEEEeCCCeEEEEeCCC
Q psy4391 197 ---------PPVSFVKFS-PNG---KYILAATLDNTLKLWDSYP 227 (231)
Q Consensus 197 ---------~~i~~~~~s-~~g---~~l~~~s~d~~v~vwd~~~ 227 (231)
.++. +... .+| +.++.++.+|.+.++|...
T Consensus 300 d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~t 342 (599)
T 1w6s_A 300 DEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTD 342 (599)
T ss_dssp CSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTT
T ss_pred ccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCC
Confidence 2221 2222 567 5677788899999998643
No 293
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.22 E-value=0.0014 Score=54.34 Aligned_cols=194 Identities=7% Similarity=0.020 Sum_probs=112.4
Q ss_pred cceEEEEECCCCCEEEEEe-CCCcEEEeecCCCcE-EEEEecccccEEEEEECCCCCEEE-EecCCCcEEEEeCCCceee
Q psy4391 28 KAVSSVKFSPNGEWLASSS-ADKLIKIWGAYDGKF-EKTISGHKLGISDVAWSSDSRLLV-SGSDDKTLKIWELSSGKCL 104 (231)
Q Consensus 28 ~~i~~~~~~~~~~~l~~~~-~dg~i~i~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~-~~~~~g~i~~~d~~~~~~~ 104 (231)
.....++|++.+..|+.+. ..+.|..++...... ...+.........+++.+.++.|+ +-...+.|.+.+++.....
T Consensus 40 ~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~ 119 (619)
T 3s94_A 40 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRK 119 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred CceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEE
Confidence 4577899998777666544 456788777754422 223333335678899998665554 4556789999998765433
Q ss_pred eeecCCCcceEEEEECCCCCEEEEeec--CCcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeEEEE-ecCCeEEEEe
Q psy4391 105 KTLKGHSNYVFCCNFNPQSNLIVSGSF--DESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSS-SYDGLCRIWD 181 (231)
Q Consensus 105 ~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~v~d 181 (231)
..+.........++++|.+..|+.... .+.|...++............-.....+++++++..|+.+ ...+.|..+|
T Consensus 120 ~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~ 199 (619)
T 3s94_A 120 VLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSN 199 (619)
T ss_dssp EEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEES
T ss_pred EEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEec
Confidence 333233344667889997666655543 4567777776433222222233457889999876666554 4567899999
Q ss_pred CCCCceeeeeec-CCCCCeEEEEECCCCCEEEEEe-CCCeEEEEeC
Q psy4391 182 TASGQCLKTLID-DDNPPVSFVKFSPNGKYILAAT-LDNTLKLWDS 225 (231)
Q Consensus 182 ~~~~~~~~~~~~-~~~~~i~~~~~s~~g~~l~~~s-~d~~v~vwd~ 225 (231)
+..... ..+.. ....+ ..+++.++ .|+.+. ..+.|...|.
T Consensus 200 ~dG~~~-~~~~~~~~~~P-~gi~~~~~--~ly~td~~~~~V~~~d~ 241 (619)
T 3s94_A 200 LDGTNR-QAVVKGSLPHP-FALTLFED--ILYWTDWSTHSILACNK 241 (619)
T ss_dssp SSCCEE-C---------C-CCEEESSS--EEEEECTTTCSEEEEES
T ss_pred CCCCcc-EEEEeCCCCCc-eEEEEeCC--EEEEecCCCCEEEEEEC
Confidence 875432 22222 11122 24566555 444444 4567777775
No 294
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.16 E-value=0.00034 Score=58.43 Aligned_cols=187 Identities=11% Similarity=0.065 Sum_probs=107.2
Q ss_pred eEEEEECCCCCEEEEEeC-CCcEEEeecCCCcEEEEEeccccc-EEEEEECCCCCEEEEec-CC-----CcEEEEeCCCc
Q psy4391 30 VSSVKFSPNGEWLASSSA-DKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSDSRLLVSGS-DD-----KTLKIWELSSG 101 (231)
Q Consensus 30 i~~~~~~~~~~~l~~~~~-dg~i~i~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~-~~-----g~i~~~d~~~~ 101 (231)
..+.++..++++++.|+. +..+.+||..+.+....-.-...+ -..++..++++.++.|+ .+ ..+.+||..+.
T Consensus 245 ~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~ 324 (656)
T 1k3i_A 245 CPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSK 324 (656)
T ss_dssp SCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTT
T ss_pred cccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCC
Confidence 335677889999888874 457999998776554322111111 13445667888888887 33 46889998765
Q ss_pred eeeee-------ec-C-------C----------Cc---------------------------------------ceEEE
Q psy4391 102 KCLKT-------LK-G-------H----------SN---------------------------------------YVFCC 117 (231)
Q Consensus 102 ~~~~~-------~~-~-------~----------~~---------------------------------------~v~~~ 117 (231)
+.... +. . . .+ .-.++
T Consensus 325 ~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av 404 (656)
T 1k3i_A 325 TWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAV 404 (656)
T ss_dssp EEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEE
T ss_pred cceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceE
Confidence 43221 00 0 0 00 00111
Q ss_pred EE-CCCCCEEEEeecCC-----------cEEEEECCCCceeeec--cCCCCC-eEEEEEcCCCCeEEEEecC--------
Q psy4391 118 NF-NPQSNLIVSGSFDE-----------SVRIWDVRTGKCLKTL--PAHSDP-VSAVHFNRDGSLIVSSSYD-------- 174 (231)
Q Consensus 118 ~~-~~~~~~l~~~~~d~-----------~i~v~d~~~~~~~~~~--~~~~~~-v~~~~~~~~~~~l~~~~~d-------- 174 (231)
.+ ..++++++.|+.++ .+.+||..+....... ...... -.++...|++++++.|+.+
T Consensus 405 ~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~ 484 (656)
T 1k3i_A 405 MYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDS 484 (656)
T ss_dssp EEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCC
T ss_pred eccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCC
Confidence 12 13567777777532 5777887766543322 111111 2344667899999998854
Q ss_pred ---CeEEEEeCCCCceeeeeecCC-CCCeEEEEECCCCCEEEEEeC
Q psy4391 175 ---GLCRIWDTASGQCLKTLIDDD-NPPVSFVKFSPNGKYILAATL 216 (231)
Q Consensus 175 ---g~i~v~d~~~~~~~~~~~~~~-~~~i~~~~~s~~g~~l~~~s~ 216 (231)
..+.+||..+.+....-.... ........+.|+|+.+++|+.
T Consensus 485 ~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 485 TPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp SBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred CcccceEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 468899998765432111111 111233456799999999884
No 295
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.13 E-value=0.0025 Score=52.87 Aligned_cols=193 Identities=9% Similarity=-0.013 Sum_probs=119.6
Q ss_pred cceEEEEECCCCCEEEEE-eCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEE-EEecCCCcEEEEeCCCceeee
Q psy4391 28 KAVSSVKFSPNGEWLASS-SADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLL-VSGSDDKTLKIWELSSGKCLK 105 (231)
Q Consensus 28 ~~i~~~~~~~~~~~l~~~-~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~~g~i~~~d~~~~~~~~ 105 (231)
.....++|++.+..|+.+ ..++.|+.++.........+.........+++.+.+..| .+-...+.|.+.+++......
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~ 116 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQV 116 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEE
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEE
Confidence 357789999877766544 456788888876544444443333456678888765555 444556789999987644322
Q ss_pred eecCCCcceEEEEECCCCCEEEEeec--CCcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeEEEE-ecCCeEEEEeC
Q psy4391 106 TLKGHSNYVFCCNFNPQSNLIVSGSF--DESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSS-SYDGLCRIWDT 182 (231)
Q Consensus 106 ~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~v~d~ 182 (231)
.+.........++++|....|+.... .+.|...++..... ..+...-.....+++++++..|+.+ ...+.|..+|+
T Consensus 117 l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~-~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~ 195 (628)
T 4a0p_A 117 LVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSER-TTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNM 195 (628)
T ss_dssp EECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC-EEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred EEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCce-EEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcC
Confidence 33233455788999986666655543 56788888764432 2222234567889999977666555 45678999998
Q ss_pred CCCceeeeeecCCCCCeEEEEECCCCCEEEEEe-CCCeEEEEeC
Q psy4391 183 ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT-LDNTLKLWDS 225 (231)
Q Consensus 183 ~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s-~d~~v~vwd~ 225 (231)
..... ..+..... ....+++.. + .|+.+. ..+.|...|.
T Consensus 196 dG~~~-~v~~~~l~-~P~glav~~-~-~ly~tD~~~~~I~~~dk 235 (628)
T 4a0p_A 196 LGLNR-EVIADDLP-HPFGLTQYQ-D-YIYWTDWSRRSIERANK 235 (628)
T ss_dssp TSCSC-EEEEECCS-CEEEEEEET-T-EEEEEETTTTEEEEEET
T ss_pred CCCce-EEeeccCC-CceEEEEEC-C-EEEEecCCCCEEEEEEC
Confidence 76443 33322222 234566654 3 444444 4678887774
No 296
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.07 E-value=0.0005 Score=55.11 Aligned_cols=153 Identities=17% Similarity=0.156 Sum_probs=93.5
Q ss_pred EEEEEECC-CCCEEEEecC-CCcEEEEeCCCceeeeeecCC---CcceEEEEE-------CCCCCEEEEeecCC------
Q psy4391 72 ISDVAWSS-DSRLLVSGSD-DKTLKIWELSSGKCLKTLKGH---SNYVFCCNF-------NPQSNLIVSGSFDE------ 133 (231)
Q Consensus 72 v~~~~~~~-~~~~l~~~~~-~g~i~~~d~~~~~~~~~~~~~---~~~v~~~~~-------~~~~~~l~~~~~d~------ 133 (231)
...|+|+| +...|+.+.. .+.|++.|++++......... ......++| ++++..|+.+...+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~ 220 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDES 220 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGE
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccC
Confidence 45789998 3444544444 467899999887765544332 234788999 99999666665543
Q ss_pred -cEEEEECCC-Ccee-----eeccCCCCCeEEEEEcCCC-CeEEEEecCCeEEEEeCC-------CCce-----------
Q psy4391 134 -SVRIWDVRT-GKCL-----KTLPAHSDPVSAVHFNRDG-SLIVSSSYDGLCRIWDTA-------SGQC----------- 187 (231)
Q Consensus 134 -~i~v~d~~~-~~~~-----~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~v~d~~-------~~~~----------- 187 (231)
.+.+++... +... ..+.... ....++++|++ .++++-..++.|..+|+. ++..
T Consensus 221 ~~V~~i~r~~~G~~~~~~~~~~v~~~~-~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~ 299 (496)
T 3kya_A 221 PSVYIIKRNADGTFDDRSDIQLIAAYK-QCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNT 299 (496)
T ss_dssp EEEEEEECCTTSCCSTTSCEEEEEEES-CCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTT
T ss_pred ceEEEEecCCCCceeecccceeeccCC-CceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccc
Confidence 266666433 1211 1221112 23467889954 455566677889999987 4543
Q ss_pred eeeee-cCCCCCeEEEEECCCCCEEEEEe-CCCeEEEEeC
Q psy4391 188 LKTLI-DDDNPPVSFVKFSPNGKYILAAT-LDNTLKLWDS 225 (231)
Q Consensus 188 ~~~~~-~~~~~~i~~~~~s~~g~~l~~~s-~d~~v~vwd~ 225 (231)
...+. ......-..++|+|+|++|+.+. ..++|+.+|.
T Consensus 300 ~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~ 339 (496)
T 3kya_A 300 FKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDY 339 (496)
T ss_dssp EEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred cceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEec
Confidence 11222 22223346799999999655554 5679998664
No 297
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.06 E-value=3.8e-05 Score=64.55 Aligned_cols=176 Identities=7% Similarity=-0.020 Sum_probs=100.8
Q ss_pred CCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEec-CCCcEEEEeCCC----ceeeeeecCCCcceEEEEECCC
Q psy4391 48 DKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGS-DDKTLKIWELSS----GKCLKTLKGHSNYVFCCNFNPQ 122 (231)
Q Consensus 48 dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~g~i~~~d~~~----~~~~~~~~~~~~~v~~~~~~~~ 122 (231)
.+.|+..+.........+.. ...+..++|++.+..|+.+. ..+.|+.+++.+ ......+.........+++++.
T Consensus 385 ~~~I~~id~~~~~~~~~~~~-~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~ 463 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 463 (699)
T ss_dssp TTC-CEECTTSCCEECCSCC-CTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCS
T ss_pred ccceEEEeCCCCcceeeecc-CcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEee
Confidence 35666667655444333322 23456789998776666554 457899999875 2222222222223445777754
Q ss_pred -CCEEEEeecCCcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeEEEEec-C-CeEEEEeCCCCceeeeeecCCCCCe
Q psy4391 123 -SNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY-D-GLCRIWDTASGQCLKTLIDDDNPPV 199 (231)
Q Consensus 123 -~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d-g~i~v~d~~~~~~~~~~~~~~~~~i 199 (231)
++++++-...+.|.++++........+.........++++|.+.+|+.+.. . +.|.++++.... ...+.......-
T Consensus 464 ~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~-~~~l~~~~l~~P 542 (699)
T 1n7d_A 464 HSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLVTENIQWP 542 (699)
T ss_dssp SSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCC-CCEESCSSCSSC
T ss_pred CCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCC-eeEEEeCCCCCc
Confidence 455555556788999998755433333322344567889987665554433 2 678777765432 222222222223
Q ss_pred EEEEECCCCCEEEEEe-CCCeEEEEeC
Q psy4391 200 SFVKFSPNGKYILAAT-LDNTLKLWDS 225 (231)
Q Consensus 200 ~~~~~s~~g~~l~~~s-~d~~v~vwd~ 225 (231)
..|+|+|++..|+.+. ..++|.++|.
T Consensus 543 nGlavd~~~~~LY~aD~~~~~I~~~d~ 569 (699)
T 1n7d_A 543 NGITLDLLSGRLYWVDSKLHSISSIDV 569 (699)
T ss_dssp CCEEECTTTCCEEEEETTTTEEEEECS
T ss_pred cEEEEeccCCEEEEEecCCCeEEEEcc
Confidence 5689999876665554 4568988886
No 298
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.91 E-value=0.0013 Score=49.09 Aligned_cols=180 Identities=11% Similarity=0.124 Sum_probs=93.5
Q ss_pred CCCEEEEEeCC-----CcEEEeecCCCc---EEEEEe--cccccEEEEEECCCCCEEEEecCC-----CcEEEEeCCCce
Q psy4391 38 NGEWLASSSAD-----KLIKIWGAYDGK---FEKTIS--GHKLGISDVAWSSDSRLLVSGSDD-----KTLKIWELSSGK 102 (231)
Q Consensus 38 ~~~~l~~~~~d-----g~i~i~~~~~~~---~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~-----g~i~~~d~~~~~ 102 (231)
+++.++.|+.+ ..+.+||..+.. ....-. ........+.. +++.++.|+.+ ..+.+||+.+.+
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~ 139 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQ 139 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCe
Confidence 45666666654 358888887765 433321 11111222222 56666666643 358889988765
Q ss_pred eeee--ecCCCcceEEEEECCCCCEEEEeecC-----CcEEEEECCCCceeee--ccCCCCCeEEEEEcCCCCeEEEEec
Q psy4391 103 CLKT--LKGHSNYVFCCNFNPQSNLIVSGSFD-----ESVRIWDVRTGKCLKT--LPAHSDPVSAVHFNRDGSLIVSSSY 173 (231)
Q Consensus 103 ~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~v~d~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~ 173 (231)
.... +.........+.+ ++.+++.|+.+ ..+..||+.+.+.... +........++.+ ++++++.|+.
T Consensus 140 W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~ 215 (301)
T 2vpj_A 140 WSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--NDHIYVVGGF 215 (301)
T ss_dssp EEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCB
T ss_pred EEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CCEEEEEeCC
Confidence 3322 2211111112222 56777777754 4588999887654322 1111111122222 5677777776
Q ss_pred C-----CeEEEEeCCCCceeeeeecCCC-CCeEEEEECCCCCEEEEEeCC-----CeEEEEeC
Q psy4391 174 D-----GLCRIWDTASGQCLKTLIDDDN-PPVSFVKFSPNGKYILAATLD-----NTLKLWDS 225 (231)
Q Consensus 174 d-----g~i~v~d~~~~~~~~~~~~~~~-~~i~~~~~s~~g~~l~~~s~d-----~~v~vwd~ 225 (231)
+ ..+.+||+.+.+....-..... .....+. -+++.++.|+.+ +.+.+||.
T Consensus 216 ~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~ 276 (301)
T 2vpj_A 216 DGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATV--LRGRLYAIAGYDGNSLLSSIECYDP 276 (301)
T ss_dssp CSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBEEEEEEEET
T ss_pred CCCcccceEEEEeCCCCcEEECCCCCCcccceeEEE--ECCEEEEEcCcCCCcccccEEEEcC
Confidence 4 4688999988764332111111 1112222 266777777765 35777775
No 299
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.88 E-value=0.0076 Score=50.05 Aligned_cols=195 Identities=9% Similarity=0.022 Sum_probs=114.3
Q ss_pred cceEEEEECCCCCEEEEEe-CCCcEEEeecCCCcEEEEEec------ccccEEEEEECCCCCEEE-EecCCCcEEEEeCC
Q psy4391 28 KAVSSVKFSPNGEWLASSS-ADKLIKIWGAYDGKFEKTISG------HKLGISDVAWSSDSRLLV-SGSDDKTLKIWELS 99 (231)
Q Consensus 28 ~~i~~~~~~~~~~~l~~~~-~dg~i~i~~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~l~-~~~~~g~i~~~d~~ 99 (231)
..+.+++|.+....|+-+. ..+.|+.++.........+.. ....+..+++...++.|+ +-...+.|.+.+++
T Consensus 340 ~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~~~~ 419 (628)
T 4a0p_A 340 RNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLD 419 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--------CCCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCceEEEEecCCCeEEEEecCcceEEEEEcCCCCceEEEEcccccccccCCcceEEeeccCCeEEEEcCCCCEEEEEECC
Confidence 4577899988766665544 456787777654333333322 233578899998766664 55667889999987
Q ss_pred CceeeeeecCCCcceEEEEECCC-CCEEEEeecCC--cEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeEEEEe-cCC
Q psy4391 100 SGKCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDE--SVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSS-YDG 175 (231)
Q Consensus 100 ~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~--~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg 175 (231)
.......+.........++++|. |.++.+-.... .|...++............-.....+++++++..|+.+. ..+
T Consensus 420 G~~~~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~~~~~l~~~~l~~P~gla~D~~~~~LYw~D~~~~ 499 (628)
T 4a0p_A 420 GRSVGVVLKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGTEREVLFFSGLSKPIALALDSRLGKLFWADSDLR 499 (628)
T ss_dssp SCEEEEEEECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTT
T ss_pred CCeEEEEEeCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCCCcEEEEeccCCCccEEEEeCCCCEEEEEeCCCC
Confidence 54322223334456789999995 44444443333 577777763332222222234568899999877666554 457
Q ss_pred eEEEEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEe-CCCeEEEEeC
Q psy4391 176 LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT-LDNTLKLWDS 225 (231)
Q Consensus 176 ~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s-~d~~v~vwd~ 225 (231)
.|..+++... ..+.+..........+++.. + .|+.+. ..+.|...|.
T Consensus 500 ~I~~~~~dG~-~r~~~~~~~~~~P~glav~~-~-~ly~tD~~~~~i~~~~k 547 (628)
T 4a0p_A 500 RIESSDLSGA-NRIVLEDSNILQPVGLTVFE-N-WLYWIDKQQQMIEKIDM 547 (628)
T ss_dssp EEEEEETTSC-SCEEEECSSCSCEEEEEEET-T-EEEEEETTTTEEEEEET
T ss_pred EEEEEeCCCC-ceEEEEcCCCCCcEEEEEEC-C-EEEEEECCCCeEEEEEC
Confidence 8999998543 33444322222334566554 3 344443 3456666654
No 300
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.88 E-value=0.0018 Score=48.42 Aligned_cols=180 Identities=7% Similarity=0.072 Sum_probs=93.2
Q ss_pred CCCEEEEEeCC----CcEEEeecCCCcEEEEEe--cccccEEEEEECCCCCEEEEecCC------CcEEEEeCCCceeee
Q psy4391 38 NGEWLASSSAD----KLIKIWGAYDGKFEKTIS--GHKLGISDVAWSSDSRLLVSGSDD------KTLKIWELSSGKCLK 105 (231)
Q Consensus 38 ~~~~l~~~~~d----g~i~i~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~------g~i~~~d~~~~~~~~ 105 (231)
+++.++.|+.+ ..+.+||..+.+....-. ..........+ +++.++.|+.+ ..+.+||..+.+...
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~ 132 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHT 132 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEe
Confidence 45666666654 567888887766543322 11111222222 56666777654 358899988765332
Q ss_pred e--ecCCCcceEEEEECCCCCEEEEeec---------CCcEEEEECCCCceeee--ccCCCCCeEEEEEcCCCCeEEEEe
Q psy4391 106 T--LKGHSNYVFCCNFNPQSNLIVSGSF---------DESVRIWDVRTGKCLKT--LPAHSDPVSAVHFNRDGSLIVSSS 172 (231)
Q Consensus 106 ~--~~~~~~~v~~~~~~~~~~~l~~~~~---------d~~i~v~d~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~ 172 (231)
. +.........+. .++.+++.|+. ...+.+||+.+.+-... +......-..+.+ ++++++.|+
T Consensus 133 ~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG 208 (306)
T 3ii7_A 133 KPSMLTQRCSHGMVE--ANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV--KDKIFAVGG 208 (306)
T ss_dssp ECCCSSCCBSCEEEE--ETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECC
T ss_pred CCCCcCCcceeEEEE--ECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE--CCEEEEEeC
Confidence 2 111111111222 25667777654 34488999987753222 1111111122222 566777776
Q ss_pred cC-----CeEEEEeCCCCceeeeeecCC-CCCeEEEEECCCCCEEEEEeCC-----CeEEEEeC
Q psy4391 173 YD-----GLCRIWDTASGQCLKTLIDDD-NPPVSFVKFSPNGKYILAATLD-----NTLKLWDS 225 (231)
Q Consensus 173 ~d-----g~i~v~d~~~~~~~~~~~~~~-~~~i~~~~~s~~g~~l~~~s~d-----~~v~vwd~ 225 (231)
.+ ..+.+||+.+.+....-.... ......+.+ +++.++.|+.+ +.+.+||.
T Consensus 209 ~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~ 270 (306)
T 3ii7_A 209 QNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNT 270 (306)
T ss_dssp EETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEET
T ss_pred CCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcC
Confidence 54 368899998875432211111 111122223 66778888754 56788885
No 301
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.87 E-value=0.0013 Score=49.23 Aligned_cols=181 Identities=10% Similarity=0.155 Sum_probs=92.0
Q ss_pred CCCEEEEEeCCC-----cEEEeecCCCcEEEEEe--cccccEEEEEECCCCCEEEEecCCC-----cEEEEeCCCceeee
Q psy4391 38 NGEWLASSSADK-----LIKIWGAYDGKFEKTIS--GHKLGISDVAWSSDSRLLVSGSDDK-----TLKIWELSSGKCLK 105 (231)
Q Consensus 38 ~~~~l~~~~~dg-----~i~i~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~g-----~i~~~d~~~~~~~~ 105 (231)
+++.++.|+.++ .+.+||..+.+....-. ..........+ ++..++.|+.++ .+.+||+.+.+...
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~ 138 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFH 138 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEee
Confidence 456666666543 57788877665443321 11111122222 566666776543 47788888765332
Q ss_pred e--ecCCCcceEEEEECCCCCEEEEeecC-------CcEEEEECCCCceeee--ccCCCCCeEEEEEcCCCCeEEEEecC
Q psy4391 106 T--LKGHSNYVFCCNFNPQSNLIVSGSFD-------ESVRIWDVRTGKCLKT--LPAHSDPVSAVHFNRDGSLIVSSSYD 174 (231)
Q Consensus 106 ~--~~~~~~~v~~~~~~~~~~~l~~~~~d-------~~i~v~d~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d 174 (231)
. +.........+.+ ++.+++.|+.+ ..+..||+.+.+-... +.........+.+ ++++++.|+.+
T Consensus 139 ~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~ 214 (302)
T 2xn4_A 139 VAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHD 214 (302)
T ss_dssp ECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBS
T ss_pred cCCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE--CCEEEEECCCC
Confidence 2 1111111112222 56677777643 3488999887653222 2111111122222 56777777764
Q ss_pred -----CeEEEEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEeCCC-----eEEEEeC
Q psy4391 175 -----GLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN-----TLKLWDS 225 (231)
Q Consensus 175 -----g~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~-----~v~vwd~ 225 (231)
..+.+||+.+++....-.......-..++ .-+++.++.|+.++ .+.+||.
T Consensus 215 ~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~-~~~~~i~v~GG~~~~~~~~~v~~yd~ 274 (302)
T 2xn4_A 215 GPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVC-AVNGLLYVVGGDDGSCNLASVEYYNP 274 (302)
T ss_dssp SSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEE-EETTEEEEECCBCSSSBCCCEEEEET
T ss_pred CCcccceEEEEeCCCCCEeeCCCCCCccccCeEE-EECCEEEEECCcCCCcccccEEEEcC
Confidence 36889999887643321111111111122 23667777777553 5888885
No 302
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.85 E-value=0.0088 Score=49.60 Aligned_cols=157 Identities=6% Similarity=0.000 Sum_probs=96.7
Q ss_pred ceEEEEECCCCCEEEEEe-CCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEE-EEecCCCcEEEEeCCCceeeee
Q psy4391 29 AVSSVKFSPNGEWLASSS-ADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLL-VSGSDDKTLKIWELSSGKCLKT 106 (231)
Q Consensus 29 ~i~~~~~~~~~~~l~~~~-~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~~g~i~~~d~~~~~~~~~ 106 (231)
.+.+++|.+.+..|+.+. ..+.|+.++.........+.........+++...+..| .+-...+.|.+.+++.......
T Consensus 350 ~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~~~~l 429 (619)
T 3s94_A 350 HAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKIL 429 (619)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred ccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCeEEEE
Confidence 467788888655555443 46778888775544433443333456788888755544 4555678899999876543223
Q ss_pred ecCCCcceEEEEECCCCCEEEEeec--CCcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeEEEE-ecCCeEEEEeCC
Q psy4391 107 LKGHSNYVFCCNFNPQSNLIVSGSF--DESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSS-SYDGLCRIWDTA 183 (231)
Q Consensus 107 ~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~v~d~~ 183 (231)
+...-.....++++|....|+.... ...|...++............-.....+++++++..|+.+ +..+.|..+++.
T Consensus 430 ~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~d 509 (619)
T 3s94_A 430 ISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTD 509 (619)
T ss_dssp ECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEESS
T ss_pred EECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccEEEEeCCCCCCeeeEEcccCCEEEEEECCCCEEEEEecC
Confidence 3333456788999997555554443 3567777775332222222223467889999876666655 445788889886
Q ss_pred CC
Q psy4391 184 SG 185 (231)
Q Consensus 184 ~~ 185 (231)
..
T Consensus 510 G~ 511 (619)
T 3s94_A 510 GT 511 (619)
T ss_dssp SC
T ss_pred CC
Confidence 44
No 303
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.83 E-value=0.0058 Score=46.89 Aligned_cols=193 Identities=12% Similarity=0.165 Sum_probs=110.2
Q ss_pred ceEEEEECCCCCEEEEE------------eCCCcEEEeecCC--CcEEE-EEec-----ccccEEEEEECC--CCC-EEE
Q psy4391 29 AVSSVKFSPNGEWLASS------------SADKLIKIWGAYD--GKFEK-TISG-----HKLGISDVAWSS--DSR-LLV 85 (231)
Q Consensus 29 ~i~~~~~~~~~~~l~~~------------~~dg~i~i~~~~~--~~~~~-~~~~-----~~~~v~~~~~~~--~~~-~l~ 85 (231)
..-.+...|+|..++++ ..+|.|.++|..+ .+... .+.+ .......+.+.+ ++. +|+
T Consensus 51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~ 130 (355)
T 3sre_A 51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLL 130 (355)
T ss_dssp CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEE
T ss_pred CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEE
Confidence 34566778887766555 2689999999863 23221 2222 224567777755 343 343
Q ss_pred Ee-cC--CCcEEEEeCCCc--e--eeeeecCC-CcceEEEEECCCCCEEEEee-----------------cCCcEEEEEC
Q psy4391 86 SG-SD--DKTLKIWELSSG--K--CLKTLKGH-SNYVFCCNFNPQSNLIVSGS-----------------FDESVRIWDV 140 (231)
Q Consensus 86 ~~-~~--~g~i~~~d~~~~--~--~~~~~~~~-~~~v~~~~~~~~~~~l~~~~-----------------~d~~i~v~d~ 140 (231)
++ .. +..+.+|+++.. . .+..+.+. -.....+.+.++|.+.++.. ..+.|..+|.
T Consensus 131 Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~ 210 (355)
T 3sre_A 131 VVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP 210 (355)
T ss_dssp EEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT
T ss_pred EEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC
Confidence 33 33 456777766532 2 22233322 24567888999998877654 1244555554
Q ss_pred CCCceeeeccCCCCCeEEEEEcCCCCeEEEEe-cCCeEEEEeCCC-Cceee-eeecCCCCCeEEEEECC-CCCEEEEEeC
Q psy4391 141 RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSS-YDGLCRIWDTAS-GQCLK-TLIDDDNPPVSFVKFSP-NGKYILAATL 216 (231)
Q Consensus 141 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~v~d~~~-~~~~~-~~~~~~~~~i~~~~~s~-~g~~l~~~s~ 216 (231)
++ +..+...-.....++|+||++.++.+. ..+.|..|++.. ++... .... .......+++++ +|.+.+++..
T Consensus 211 --~~-~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~-~~g~PDGi~vD~e~G~lwva~~~ 286 (355)
T 3sre_A 211 --ND-VRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLS-FDTLVDNISVDPVTGDLWVGCHP 286 (355)
T ss_dssp --TC-CEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEE-CSSEEEEEEECTTTCCEEEEEES
T ss_pred --Ce-EEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEe-CCCCCceEEEeCCCCcEEEEecC
Confidence 22 222222223567899999998877654 568999999863 33211 1221 123346788999 5998776654
Q ss_pred C-CeEEEEeC
Q psy4391 217 D-NTLKLWDS 225 (231)
Q Consensus 217 d-~~v~vwd~ 225 (231)
+ ++|..||+
T Consensus 287 ~g~~v~~~~P 296 (355)
T 3sre_A 287 NGMRIFFYDA 296 (355)
T ss_dssp CHHHHHSCCT
T ss_pred CceEEEEECC
Confidence 4 35555544
No 304
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.74 E-value=0.0073 Score=45.39 Aligned_cols=175 Identities=9% Similarity=0.041 Sum_probs=86.0
Q ss_pred CCCCCEEEEEeC-----C------CcEEEeecCCCcEEEEEe--cccccEEEEEECCCCCEEEEecCC--------CcEE
Q psy4391 36 SPNGEWLASSSA-----D------KLIKIWGAYDGKFEKTIS--GHKLGISDVAWSSDSRLLVSGSDD--------KTLK 94 (231)
Q Consensus 36 ~~~~~~l~~~~~-----d------g~i~i~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~--------g~i~ 94 (231)
..+++.++.|+. . ..+..||..+.+....-. ..........+ ++..++.|+.+ ..+.
T Consensus 43 ~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~ 120 (315)
T 4asc_A 43 TKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDSVM 120 (315)
T ss_dssp CTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCEEEEE--TTEEEEECCEESSTTCCBCCCEE
T ss_pred EECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhceeEEEE--CCEEEEEeCCcCCCCCcccceEE
Confidence 346777777763 1 126778877765533211 11111111222 45666666632 3588
Q ss_pred EEeCCCceeeee--ecCCCcceEEEEECCCCCEEEEeec-C-----CcEEEEECCCCceeee--ccCCCCCeEEEEEcCC
Q psy4391 95 IWELSSGKCLKT--LKGHSNYVFCCNFNPQSNLIVSGSF-D-----ESVRIWDVRTGKCLKT--LPAHSDPVSAVHFNRD 164 (231)
Q Consensus 95 ~~d~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~-d-----~~i~v~d~~~~~~~~~--~~~~~~~v~~~~~~~~ 164 (231)
+||..+.+-... +.........+. .++.+++.|+. + ..+.+||+.+.+-... +........++.+ +
T Consensus 121 ~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~ 196 (315)
T 4asc_A 121 CYDRLSFKWGESDPLPYVVYGHTVLS--HMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--D 196 (315)
T ss_dssp EEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--T
T ss_pred EECCCCCcEeECCCCCCcccceeEEE--ECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE--C
Confidence 899987653221 111111111222 35667777776 2 3588999887653221 1111111122222 5
Q ss_pred CCeEEEEecCC-----eEEEEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEeCC
Q psy4391 165 GSLIVSSSYDG-----LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD 217 (231)
Q Consensus 165 ~~~l~~~~~dg-----~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d 217 (231)
+++++.|+.++ .+.+||+.+.+....-.......-..++ .-+++.++.|+.+
T Consensus 197 ~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~-~~~~~l~v~GG~~ 253 (315)
T 4asc_A 197 GRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLV-SLVGTLYAIGGFA 253 (315)
T ss_dssp TEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEE-EETTEEEEEEEEE
T ss_pred CEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEE-EECCEEEEECCcc
Confidence 67777777654 5888999887543321111111111122 2256777777753
No 305
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.67 E-value=0.011 Score=45.42 Aligned_cols=100 Identities=13% Similarity=0.187 Sum_probs=60.0
Q ss_pred cceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEE--Ee---cccccEEEEEECCC---CCEEEEecC-C-----CcE
Q psy4391 28 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT--IS---GHKLGISDVAWSSD---SRLLVSGSD-D-----KTL 93 (231)
Q Consensus 28 ~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~--~~---~~~~~v~~~~~~~~---~~~l~~~~~-~-----g~i 93 (231)
..-..++|.|+|+++++ ...|.|++++ ++..... +. ........++++|+ +..|+.+.. . +.|
T Consensus 31 ~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v 107 (352)
T 2ism_A 31 EVPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQV 107 (352)
T ss_dssp SCEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEE
T ss_pred CCceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEE
Confidence 35679999999995554 6679999888 3432211 11 12346789999998 555544433 2 567
Q ss_pred EEEeCCCce-----ee-eeec---CCCcceEEEEECCCCCEEEEee
Q psy4391 94 KIWELSSGK-----CL-KTLK---GHSNYVFCCNFNPQSNLIVSGS 130 (231)
Q Consensus 94 ~~~d~~~~~-----~~-~~~~---~~~~~v~~~~~~~~~~~l~~~~ 130 (231)
..++..... .+ ..+. ........+.|.|+|.+.++.+
T Consensus 108 ~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 108 VRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred EEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 777776431 11 1122 1111234688999998777643
No 306
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.62 E-value=0.0062 Score=45.49 Aligned_cols=178 Identities=12% Similarity=0.152 Sum_probs=89.4
Q ss_pred EEEEEeC--CCcEEEeecCCCcEEEEE--ecccccEEEEEECCCCCEEEEecCC----CcEEEEeCCCceeeee--ecCC
Q psy4391 41 WLASSSA--DKLIKIWGAYDGKFEKTI--SGHKLGISDVAWSSDSRLLVSGSDD----KTLKIWELSSGKCLKT--LKGH 110 (231)
Q Consensus 41 ~l~~~~~--dg~i~i~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~~----g~i~~~d~~~~~~~~~--~~~~ 110 (231)
+++.|+. ...+.+||..+.+....- .........+. .++..++.|+.+ ..+.+||..+.+.... +...
T Consensus 14 l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~ 91 (306)
T 3ii7_A 14 RIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVF--WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTP 91 (306)
T ss_dssp EEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEE--ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSC
T ss_pred EEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEE--ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCcc
Confidence 4455554 356788888776554321 11111112222 255666777654 5688899887653322 2111
Q ss_pred CcceEEEEECCCCCEEEEeecC------CcEEEEECCCCceeee--ccCCCCCeEEEEEcCCCCeEEEEec---------
Q psy4391 111 SNYVFCCNFNPQSNLIVSGSFD------ESVRIWDVRTGKCLKT--LPAHSDPVSAVHFNRDGSLIVSSSY--------- 173 (231)
Q Consensus 111 ~~~v~~~~~~~~~~~l~~~~~d------~~i~v~d~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~--------- 173 (231)
......+.+ ++.+++.|+.+ ..+.+||+.+.+.... +......-..+. .++++++.|+.
T Consensus 92 r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~ 167 (306)
T 3ii7_A 92 RDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE--ANGLIYVCGGSLGNNVSGRV 167 (306)
T ss_dssp CBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCEESCTTTCEE
T ss_pred ccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE--ECCEEEEECCCCCCCCcccc
Confidence 111122222 56777777765 4588999987653222 111111112222 25666666654
Q ss_pred CCeEEEEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEeCC-----CeEEEEeC
Q psy4391 174 DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD-----NTLKLWDS 225 (231)
Q Consensus 174 dg~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d-----~~v~vwd~ 225 (231)
-..+.+||+.+.+....-.......-..+.. -+++.++.|+.+ ..+.+||.
T Consensus 168 ~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~yd~ 223 (306)
T 3ii7_A 168 LNSCEVYDPATETWTELCPMIEARKNHGLVF-VKDKIFAVGGQNGLGGLDNVEYYDI 223 (306)
T ss_dssp CCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCEETTEEBCCEEEEET
T ss_pred cceEEEeCCCCCeEEECCCccchhhcceEEE-ECCEEEEEeCCCCCCCCceEEEeeC
Confidence 3458899998876433211111111111222 256777776643 35777775
No 307
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.61 E-value=0.013 Score=44.76 Aligned_cols=143 Identities=14% Similarity=0.253 Sum_probs=94.0
Q ss_pred CCcEEEeecC--CCcEEEEEec------cc-ccEEEEEE--CCC-CC-EEEEecCCCcEEEEeCC-------Cceeeeee
Q psy4391 48 DKLIKIWGAY--DGKFEKTISG------HK-LGISDVAW--SSD-SR-LLVSGSDDKTLKIWELS-------SGKCLKTL 107 (231)
Q Consensus 48 dg~i~i~~~~--~~~~~~~~~~------~~-~~v~~~~~--~~~-~~-~l~~~~~~g~i~~~d~~-------~~~~~~~~ 107 (231)
+++|.+|++. ++. ...+.. .. ..+..+++ +|. ++ ++++...+|.+..|++. +.+.++.+
T Consensus 98 ~n~l~vf~iDp~~~~-l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f 176 (355)
T 3amr_A 98 KNTIEIYAIDGKNGT-LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAF 176 (355)
T ss_dssp CCEEEEEEECTTTCC-EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEE
T ss_pred CCeEEEEEECCCCCc-eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEe
Confidence 4789999663 333 344421 11 34555677 674 43 57778888999998883 33556666
Q ss_pred cCCCcceEEEEECCCCCEEEEeecCCcEEEEECC-----CCceeeecc-CC-CCCeEEEEE--cCCCC-eEEEEe-cCCe
Q psy4391 108 KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR-----TGKCLKTLP-AH-SDPVSAVHF--NRDGS-LIVSSS-YDGL 176 (231)
Q Consensus 108 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~-----~~~~~~~~~-~~-~~~v~~~~~--~~~~~-~l~~~~-~dg~ 176 (231)
.. .+.+..|..++....|+.+-++..|..++.+ +++.+..+. .+ ...+..|++ .++++ +|++.+ .+..
T Consensus 177 ~l-gsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s 255 (355)
T 3amr_A 177 KM-NSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSS 255 (355)
T ss_dssp EC-SSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTE
T ss_pred cC-CCCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCE
Confidence 64 3567788999999999999998878888865 234444432 11 235777877 45555 666655 4679
Q ss_pred EEEEeCC-CCceeeeee
Q psy4391 177 CRIWDTA-SGQCLKTLI 192 (231)
Q Consensus 177 i~v~d~~-~~~~~~~~~ 192 (231)
+.+||.. +.+.+..+.
T Consensus 256 ~~Vydr~~~~~~vg~f~ 272 (355)
T 3amr_A 256 YAIYDRQGKNKYVADFR 272 (355)
T ss_dssp EEEEESSTTCCEEEEEE
T ss_pred EEEEECCCCCcEEEEEE
Confidence 9999996 666666653
No 308
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.60 E-value=0.0041 Score=46.36 Aligned_cols=180 Identities=12% Similarity=0.204 Sum_probs=91.0
Q ss_pred CCCEEEEEe-CC-----CcEEEeecCCCcEEEEE--ecccccEEEEEECCCCCEEEEecCC-----CcEEEEeCCCce--
Q psy4391 38 NGEWLASSS-AD-----KLIKIWGAYDGKFEKTI--SGHKLGISDVAWSSDSRLLVSGSDD-----KTLKIWELSSGK-- 102 (231)
Q Consensus 38 ~~~~l~~~~-~d-----g~i~i~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~~-----g~i~~~d~~~~~-- 102 (231)
++..++.|+ .+ ..+.+||..+.+....- .........+. .++..++.|+.+ ..+.+||..+.+
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~ 91 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVS--LHDRIYVIGGYDGRSRLSSVECLDYTADEDG 91 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTCCTTC
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEE--ECCEEEEEcCCCCCccCceEEEEECCCCCCC
Confidence 344555555 22 36788888766543321 11111111222 346666777654 368899988755
Q ss_pred -eee--eecCCCcceEEEEECCCCCEEEEeecCC-----cEEEEECCCCceee--eccCCCCCeEEEEEcCCCCeEEEEe
Q psy4391 103 -CLK--TLKGHSNYVFCCNFNPQSNLIVSGSFDE-----SVRIWDVRTGKCLK--TLPAHSDPVSAVHFNRDGSLIVSSS 172 (231)
Q Consensus 103 -~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~v~d~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~ 172 (231)
... .+.........+.+ ++.+++.|+.++ .+.+||+.+.+... .+........++.+ ++++++.|+
T Consensus 92 ~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG 167 (301)
T 2vpj_A 92 VWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGG 167 (301)
T ss_dssp CCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TTEEEEECC
T ss_pred eeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--CCEEEEECC
Confidence 222 12111111122222 567777776543 58889988765322 22211111122222 567777776
Q ss_pred cC-----CeEEEEeCCCCceeeeeecCCCC-CeEEEEECCCCCEEEEEeCC-----CeEEEEeC
Q psy4391 173 YD-----GLCRIWDTASGQCLKTLIDDDNP-PVSFVKFSPNGKYILAATLD-----NTLKLWDS 225 (231)
Q Consensus 173 ~d-----g~i~v~d~~~~~~~~~~~~~~~~-~i~~~~~s~~g~~l~~~s~d-----~~v~vwd~ 225 (231)
.+ ..+.+||+.+.+....-...... ....+. -+++.++.|+.+ +.+.+||.
T Consensus 168 ~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~ 229 (301)
T 2vpj_A 168 YDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVAL--LNDHIYVVGGFDGTAHLSSVEAYNI 229 (301)
T ss_dssp BCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEET
T ss_pred CCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEE--ECCEEEEEeCCCCCcccceEEEEeC
Confidence 54 46889999887643321111111 112222 256777777754 46788885
No 309
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.57 E-value=0.014 Score=44.24 Aligned_cols=184 Identities=13% Similarity=0.076 Sum_probs=96.9
Q ss_pred cceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEe---cccccEEEEEECCCCCEEEEecCCCcEEEEeCCCcee-
Q psy4391 28 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS---GHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKC- 103 (231)
Q Consensus 28 ~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~- 103 (231)
..+.++.+.+ +..++ ++..|.|.. ....++.-..+. .....+..+.+.+++..++++ .++.|.. ..+.++.
T Consensus 80 ~~~~~i~~~~-~~~~~-~g~~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~-S~DgG~tW 154 (327)
T 2xbg_A 80 YRFNSVSFQG-NEGWI-VGEPPIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYR-TKDSGKNW 154 (327)
T ss_dssp CEEEEEEEET-TEEEE-EEETTEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEE-ESSTTSSE
T ss_pred ccEEEEEecC-CeEEE-EECCCeEEE-ECCCCCCceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEE-EcCCCCCC
Confidence 3577888875 44444 445564443 222232212221 112346667776666656555 4554432 1222221
Q ss_pred eeeecCCCcceEEEEECCCCCEEEEeecCCcEEEEEC--CCCceeeeccCCCCCeEEEEEcCCCCeEEEEecCCeEEEEe
Q psy4391 104 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV--RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181 (231)
Q Consensus 104 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d 181 (231)
..........+..+.+.+++.+++.+...+..+-.|- .+.+.+. ......+..+.+.+++..++ ++.+|.+.+.+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g~~~~-~~~~G~~~~s~ 231 (327)
T 2xbg_A 155 QALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHN--RTTSRRLHNMGFTPDGRLWM-IVNGGKIAFSD 231 (327)
T ss_dssp EEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEE--CCSSSCEEEEEECTTSCEEE-EETTTEEEEEE
T ss_pred EEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECC--CCCCCccceeEECCCCCEEE-EeCCceEEEec
Confidence 1122233446778889998888776654333333442 2222221 22345788899999887654 45678777764
Q ss_pred CCCCceeeeeecC---CCCCeEEEEECCCCCEEEEEeCCCeE
Q psy4391 182 TASGQCLKTLIDD---DNPPVSFVKFSPNGKYILAATLDNTL 220 (231)
Q Consensus 182 ~~~~~~~~~~~~~---~~~~i~~~~~s~~g~~l~~~s~d~~v 220 (231)
...++....+... ....+..+++.+++..++++. +|.|
T Consensus 232 ~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i 272 (327)
T 2xbg_A 232 PDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL 272 (327)
T ss_dssp TTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE
T ss_pred CCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeE
Confidence 3334433332211 123477888998887766655 6655
No 310
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.56 E-value=0.0071 Score=45.09 Aligned_cols=178 Identities=10% Similarity=0.182 Sum_probs=88.4
Q ss_pred CEEEEEeCC----CcEEEeecCCCcEEEEE--ecccccEEEEEECCCCCEEEEecCC-----CcEEEEeCCCceeeee--
Q psy4391 40 EWLASSSAD----KLIKIWGAYDGKFEKTI--SGHKLGISDVAWSSDSRLLVSGSDD-----KTLKIWELSSGKCLKT-- 106 (231)
Q Consensus 40 ~~l~~~~~d----g~i~i~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~~-----g~i~~~d~~~~~~~~~-- 106 (231)
..++.|+.+ ..+..||..+......- .........+. .++..++.|+.+ ..+.+||..+.+....
T Consensus 17 ~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~ 94 (302)
T 2xn4_A 17 LMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVY--MAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVAN 94 (302)
T ss_dssp EEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECC
T ss_pred EEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEE--ECCEEEEEeCcCCCccccceEEECCCCCceeeCCC
Confidence 344555533 35778887766543321 11111111122 256666777654 3588899887653322
Q ss_pred ecCCCcceEEEEECCCCCEEEEeecCC-----cEEEEECCCCceeee--ccCCCCCeEEEEEcCCCCeEEEEecC-----
Q psy4391 107 LKGHSNYVFCCNFNPQSNLIVSGSFDE-----SVRIWDVRTGKCLKT--LPAHSDPVSAVHFNRDGSLIVSSSYD----- 174 (231)
Q Consensus 107 ~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~v~d~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d----- 174 (231)
+.........+.+ ++.+++.|+.++ .+.+||+.+.+.... +........++.+ ++++++.|+.+
T Consensus 95 ~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~ 170 (302)
T 2xn4_A 95 MRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQ 170 (302)
T ss_dssp CSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTTTE
T ss_pred CCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCc
Confidence 1111111122222 567777777653 477889887653222 1111111122222 56666666643
Q ss_pred --CeEEEEeCCCCceeeeeecCCCC-CeEEEEECCCCCEEEEEeCC-----CeEEEEeC
Q psy4391 175 --GLCRIWDTASGQCLKTLIDDDNP-PVSFVKFSPNGKYILAATLD-----NTLKLWDS 225 (231)
Q Consensus 175 --g~i~v~d~~~~~~~~~~~~~~~~-~i~~~~~s~~g~~l~~~s~d-----~~v~vwd~ 225 (231)
..+.+||+.+.+....-...... ....+. -+++.++.|+.+ +.+.+||.
T Consensus 171 ~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~ 227 (302)
T 2xn4_A 171 CLSTVECYNATTNEWTYIAEMSTRRSGAGVGV--LNNLLYAVGGHDGPLVRKSVEVYDP 227 (302)
T ss_dssp ECCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBSSSSBCCCEEEEET
T ss_pred cccEEEEEeCCCCcEEECCCCccccccccEEE--ECCEEEEECCCCCCcccceEEEEeC
Confidence 35889999887643321111111 112222 256777777654 36778875
No 311
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.52 E-value=0.011 Score=41.89 Aligned_cols=143 Identities=11% Similarity=-0.005 Sum_probs=82.8
Q ss_pred ccEEEEEECCCCCEEEEecCCCcEEEEeCCCcee------eeeecC-CCcceEEEEECCCCCEEEEeecCCcEEEEECCC
Q psy4391 70 LGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKC------LKTLKG-HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 142 (231)
Q Consensus 70 ~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~------~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~ 142 (231)
..+..++|+|+|.+.++ .+|.++-.+..+... -..+-. .-....++.|+|+|.+.++ .||.|+-++..+
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCc
Confidence 35678999998886555 777777666644111 112210 1112457889999998888 569888777543
Q ss_pred Ccee-------eeccCCCCCeEEEEEcCCCCeEEEEecCCeEEEEeCCCCce-----eeeeec-CCCCCeEEEEECCCCC
Q psy4391 143 GKCL-------KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC-----LKTLID-DDNPPVSFVKFSPNGK 209 (231)
Q Consensus 143 ~~~~-------~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~-----~~~~~~-~~~~~i~~~~~s~~g~ 209 (231)
...- +.-...-..+..+.+.|+|.+.++. |+.+.-.....+.. ...... ..-.....+.|.++|.
T Consensus 117 ~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~ 194 (236)
T 1tl2_A 117 SDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGT 194 (236)
T ss_dssp STTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSC
T ss_pred CCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCc
Confidence 2111 1111112357889999999977766 77765443332210 011111 2222345577999998
Q ss_pred EEEEEeCCCeE
Q psy4391 210 YILAATLDNTL 220 (231)
Q Consensus 210 ~l~~~s~d~~v 220 (231)
..++. ++++
T Consensus 195 l~~v~--~g~~ 203 (236)
T 1tl2_A 195 LFGVQ--GGKF 203 (236)
T ss_dssp EEEEE--TTEE
T ss_pred EEEEe--CCeE
Confidence 77666 6643
No 312
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.51 E-value=0.015 Score=43.72 Aligned_cols=175 Identities=7% Similarity=0.048 Sum_probs=83.4
Q ss_pred CCCCCEEEEEeC----CC-------cEEEeecCCCcEEEEE--ecccccEEEEEECCCCCEEEEecCC-------CcEEE
Q psy4391 36 SPNGEWLASSSA----DK-------LIKIWGAYDGKFEKTI--SGHKLGISDVAWSSDSRLLVSGSDD-------KTLKI 95 (231)
Q Consensus 36 ~~~~~~l~~~~~----dg-------~i~i~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~~-------g~i~~ 95 (231)
..+++.++.|+. ++ .+..||..+.+....- ...........+ +++.++.|+.+ ..+.+
T Consensus 54 ~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~ 131 (318)
T 2woz_A 54 TQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLC 131 (318)
T ss_dssp CSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEE
T ss_pred EECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEEE--CCEEEEEcCccCCCCcccceEEE
Confidence 346677777763 12 1667787666543321 111111122222 45666666643 24778
Q ss_pred EeCCCceeeee--ecCCCcceEEEEECCCCCEEEEeec------CCcEEEEECCCCceeee--ccCCCCCeEEEEEcCCC
Q psy4391 96 WELSSGKCLKT--LKGHSNYVFCCNFNPQSNLIVSGSF------DESVRIWDVRTGKCLKT--LPAHSDPVSAVHFNRDG 165 (231)
Q Consensus 96 ~d~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~------d~~i~v~d~~~~~~~~~--~~~~~~~v~~~~~~~~~ 165 (231)
||..+.+-... +......-..+. .++.+++.|+. -..+.+||+.+.+-... +........++.+ ++
T Consensus 132 yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~ 207 (318)
T 2woz_A 132 YDPVAAKWSEVKNLPIKVYGHNVIS--HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH--KG 207 (318)
T ss_dssp EETTTTEEEEECCCSSCEESCEEEE--ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TT
T ss_pred EeCCCCCEeECCCCCCcccccEEEE--ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEE--CC
Confidence 89887654322 111111111111 35667777764 23588999987653222 1111111122222 56
Q ss_pred CeEEEEecC-----CeEEEEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEeCC
Q psy4391 166 SLIVSSSYD-----GLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD 217 (231)
Q Consensus 166 ~~l~~~~~d-----g~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d 217 (231)
++++.|+.+ ..+.+||+.+.+....-.......-..+. .-+++.++.|+.+
T Consensus 208 ~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~-~~~~~i~v~GG~~ 263 (318)
T 2woz_A 208 KIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLV-SLAGSLYAIGGFA 263 (318)
T ss_dssp EEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEE-EETTEEEEECCBC
T ss_pred EEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEE-EECCEEEEECCee
Confidence 777777643 35778999877643221111111111122 2356777777653
No 313
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.51 E-value=0.0049 Score=46.19 Aligned_cols=181 Identities=10% Similarity=0.137 Sum_probs=91.9
Q ss_pred CCCEEEEEeC----C-----CcEEEeecCCCcEEEEEe--cccccEEEEEECCCCCEEEEecCC-----CcEEEEeCCCc
Q psy4391 38 NGEWLASSSA----D-----KLIKIWGAYDGKFEKTIS--GHKLGISDVAWSSDSRLLVSGSDD-----KTLKIWELSSG 101 (231)
Q Consensus 38 ~~~~l~~~~~----d-----g~i~i~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~-----g~i~~~d~~~~ 101 (231)
++++++.|+. + ..+.+||..+.+....-. ..........+ +++.++.|+.+ ..+.+||..+.
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~ 147 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERD 147 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTT
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCC
Confidence 4566666654 2 357788877665433211 11111222222 56666666543 36888998876
Q ss_pred eeeee--ecCCCcceEEEEECCCCCEEEEeecC-----CcEEEEECCCCceeee--ccCCCCCeEEEEEcCCCCeEEEEe
Q psy4391 102 KCLKT--LKGHSNYVFCCNFNPQSNLIVSGSFD-----ESVRIWDVRTGKCLKT--LPAHSDPVSAVHFNRDGSLIVSSS 172 (231)
Q Consensus 102 ~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~v~d~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~ 172 (231)
+.... +.........+.+ ++.+++.|+.+ ..+..||+.+.+-... +........++.+ ++++++.|+
T Consensus 148 ~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG 223 (308)
T 1zgk_A 148 EWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGG 223 (308)
T ss_dssp EEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECC
T ss_pred eEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeC
Confidence 53322 1111111122222 56777777654 4588999887653221 1111111122222 567777776
Q ss_pred cC-----CeEEEEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEeCC-----CeEEEEeC
Q psy4391 173 YD-----GLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD-----NTLKLWDS 225 (231)
Q Consensus 173 ~d-----g~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d-----~~v~vwd~ 225 (231)
.+ ..+.+||+.+.+....-.......-..++. -+++.++.|+.+ ..+.+||.
T Consensus 224 ~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~ 285 (308)
T 1zgk_A 224 YDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITV-HQGRIYVLGGYDGHTFLDSVECYDP 285 (308)
T ss_dssp BCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCBCSSCBCCEEEEEET
T ss_pred CCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEE-ECCEEEEEcCcCCCcccceEEEEcC
Confidence 64 468899998876433211111111111222 256777777643 46778875
No 314
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.50 E-value=0.006 Score=45.69 Aligned_cols=180 Identities=9% Similarity=0.109 Sum_probs=91.5
Q ss_pred CCCEEEEEeCC----CcEEEeecCCCcEEEEEe--cccccEEEEEECCCCCEEEEecC----C-----CcEEEEeCCCce
Q psy4391 38 NGEWLASSSAD----KLIKIWGAYDGKFEKTIS--GHKLGISDVAWSSDSRLLVSGSD----D-----KTLKIWELSSGK 102 (231)
Q Consensus 38 ~~~~l~~~~~d----g~i~i~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~----~-----g~i~~~d~~~~~ 102 (231)
++..++.|+.+ ..+.+||..+.+....-. ........+. .++..++.|+. + ..+.+||..+.+
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~ 101 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCV--VGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQ 101 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCEEEETTEEEECCCEEEEETTTTE
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEE--ECCEEEEECCCcCCCCCCeecceEEEECCCCCe
Confidence 45666666632 367888887765543211 1111111122 25566666665 2 368889988765
Q ss_pred eeee--ecCCCcceEEEEECCCCCEEEEeecC-----CcEEEEECCCCceeee--ccCCCCCeEEEEEcCCCCeEEEEec
Q psy4391 103 CLKT--LKGHSNYVFCCNFNPQSNLIVSGSFD-----ESVRIWDVRTGKCLKT--LPAHSDPVSAVHFNRDGSLIVSSSY 173 (231)
Q Consensus 103 ~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~v~d~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~ 173 (231)
.... +.........+.+ ++.+++.|+.+ ..+.+||+.+.+.... +......-.++.+ ++++++.|+.
T Consensus 102 W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~ 177 (308)
T 1zgk_A 102 WSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGF 177 (308)
T ss_dssp EEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCB
T ss_pred EeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCC
Confidence 3322 1111111122222 56777777643 3588899887653222 1111111122222 5677777765
Q ss_pred C-----CeEEEEeCCCCceeeeeecCCCC-CeEEEEECCCCCEEEEEeCC-----CeEEEEeC
Q psy4391 174 D-----GLCRIWDTASGQCLKTLIDDDNP-PVSFVKFSPNGKYILAATLD-----NTLKLWDS 225 (231)
Q Consensus 174 d-----g~i~v~d~~~~~~~~~~~~~~~~-~i~~~~~s~~g~~l~~~s~d-----~~v~vwd~ 225 (231)
+ ..+.+||+.+.+....-...... .-..+.+ +++.++.|+.+ ..+.+||.
T Consensus 178 ~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~ 238 (308)
T 1zgk_A 178 DGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDV 238 (308)
T ss_dssp CSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEET
T ss_pred CCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeC
Confidence 4 45889999877643221111111 1122222 56777777654 46888885
No 315
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.41 E-value=0.017 Score=41.09 Aligned_cols=143 Identities=13% Similarity=0.045 Sum_probs=82.0
Q ss_pred cceEEEEECCCCCEEEEEeCCCcEEEeecCCCcE------EEEEe-cccccEEEEEECCCCCEEEEecCCCcEEEEeCCC
Q psy4391 28 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF------EKTIS-GHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSS 100 (231)
Q Consensus 28 ~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~------~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~~ 100 (231)
..+..++|+|+|.+.++ .+|.+.-.+..+... ...+- ..-.....+.|.|+|.+.++ .||.|+-++..+
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCc
Confidence 46789999999997666 677776666533111 11221 01112467889999987776 568888777643
Q ss_pred ceee------eee-cCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCce------eeecc-CCCCCeEEEEEcCCCC
Q psy4391 101 GKCL------KTL-KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC------LKTLP-AHSDPVSAVHFNRDGS 166 (231)
Q Consensus 101 ~~~~------~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~------~~~~~-~~~~~v~~~~~~~~~~ 166 (231)
.... ..+ ...=..+..+.+.|+|.+.+.. ++.++-....++.. ...+. ..-...+.+.|.+++.
T Consensus 117 ~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~ 194 (236)
T 1tl2_A 117 SDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGT 194 (236)
T ss_dssp STTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSC
T ss_pred CCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCc
Confidence 2110 111 1122457889999999988877 67654332222111 01111 1122345567888887
Q ss_pred eEEEEecCCeEE
Q psy4391 167 LIVSSSYDGLCR 178 (231)
Q Consensus 167 ~l~~~~~dg~i~ 178 (231)
+.++. +|.+.
T Consensus 195 l~~v~--~g~~Y 204 (236)
T 1tl2_A 195 LFGVQ--GGKFY 204 (236)
T ss_dssp EEEEE--TTEEE
T ss_pred EEEEe--CCeEE
Confidence 76655 66544
No 316
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.40 E-value=0.026 Score=43.27 Aligned_cols=182 Identities=13% Similarity=0.121 Sum_probs=94.3
Q ss_pred cceEEEEECCC---CCEEEEEeC-C-----CcEEEeecCCCcE---EEE---Ee---cccccEEEEEECCCCCEEEEecC
Q psy4391 28 KAVSSVKFSPN---GEWLASSSA-D-----KLIKIWGAYDGKF---EKT---IS---GHKLGISDVAWSSDSRLLVSGSD 89 (231)
Q Consensus 28 ~~i~~~~~~~~---~~~l~~~~~-d-----g~i~i~~~~~~~~---~~~---~~---~~~~~v~~~~~~~~~~~l~~~~~ 89 (231)
.....++++|+ +..|+.+.. . +.|..++...... ... +. ........++|.|+|..+++.+.
T Consensus 75 ~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~ 154 (352)
T 2ism_A 75 SGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGE 154 (352)
T ss_dssp CSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCC
T ss_pred CCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECC
Confidence 46788999998 555554332 2 5677777654321 111 22 11112357899999976665432
Q ss_pred C-------------CcEEEEeCCCc------------eeeeee-cCCCcceEEEEECC-CCCEEEEeecCCc--------
Q psy4391 90 D-------------KTLKIWELSSG------------KCLKTL-KGHSNYVFCCNFNP-QSNLIVSGSFDES-------- 134 (231)
Q Consensus 90 ~-------------g~i~~~d~~~~------------~~~~~~-~~~~~~v~~~~~~~-~~~~l~~~~~d~~-------- 134 (231)
. |.|.-++.+.. .....+ .++ .....++|+| ++.++++-.....
T Consensus 155 ~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~-rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~de 233 (352)
T 2ism_A 155 VYERELAQDLASLGGKILRLTPEGEPAPGNPFLGRRGARPEVYSLGH-RNPQGLAWHPKTGELFSSEHGPSGEQGYGHDE 233 (352)
T ss_dssp TTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTTCTTSCTTEEEECC-SEECCCEECTTTCCEEEEEECC------CCCE
T ss_pred CCCCccccCCCCCceEEEEEcCCCCCCCCCcccCCCCCCccEEEEcC-CCcccEEEECCCCCEEEEEcCCCCCCCCCCeE
Confidence 1 45555555430 000111 112 2245678999 5666655443333
Q ss_pred EEEEECCCCc------------------eeeeccCCCCCeEEEEEcCCCCeEEEEecCCeEEEEeCCCCce------eee
Q psy4391 135 VRIWDVRTGK------------------CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC------LKT 190 (231)
Q Consensus 135 i~v~d~~~~~------------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~------~~~ 190 (231)
|.+. ..+. .+..+.. ......++| .+|.++++....+.|...++..... ...
T Consensus 234 i~~i--~~G~nyGwp~~~g~~~~~~~~~p~~~~~~-~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~ 309 (352)
T 2ism_A 234 VNLI--VPGGNYGWPRVVGRGNDPRYRDPLYFWPQ-GFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVET 309 (352)
T ss_dssp EEEE--CTTCBCCTTTCCSCCCCTTSCCCSEECTT-CCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEE
T ss_pred EEEe--ccCCcCCCCcccCCCCCCCCcCCeEecCC-CCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchhe
Confidence 3332 2221 1111111 224556777 4666666665667787777654321 122
Q ss_pred eecCCCCCeEEEEECCCCCEEEEEe
Q psy4391 191 LIDDDNPPVSFVKFSPNGKYILAAT 215 (231)
Q Consensus 191 ~~~~~~~~i~~~~~s~~g~~l~~~s 215 (231)
+.. ....+..+++.|||.++++..
T Consensus 310 ~~~-~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 310 ALS-GFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp EEE-SSCCEEEEEECTTSCEEEEEC
T ss_pred ecc-cCCCeeEEEECCCCcEEEEEe
Confidence 322 224567899999998766654
No 317
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=97.28 E-value=0.023 Score=42.61 Aligned_cols=162 Identities=6% Similarity=-0.026 Sum_probs=89.1
Q ss_pred EEECCCCCEEEEEeCC--------------CcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEec--C--CCcEE
Q psy4391 33 VKFSPNGEWLASSSAD--------------KLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGS--D--DKTLK 94 (231)
Q Consensus 33 ~~~~~~~~~l~~~~~d--------------g~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~--~g~i~ 94 (231)
--++++|++|+-+... ..|+..+....... .+.... ...|+++++.|+-.. . ...|.
T Consensus 58 ~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~-~l~~~~----~~~~s~~g~~Iy~~~~~~~~~~~Iy 132 (302)
T 3s25_A 58 MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGST-VLDPDP----CIYASLIGNYIYYLHYDTQTATSLY 132 (302)
T ss_dssp EEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCE-EEECSC----EEEEEEETTEEEEEEESSSSCEEEE
T ss_pred eeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcce-EeecCC----ccEEEEeCCEEEEEeecCCCCceEE
Confidence 3467889988765432 35666666544432 232211 226778888888765 3 34555
Q ss_pred EEeCCCceeeeeecCCCcceEEEEECCCCCEEEEeec-CCcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeEEEEec
Q psy4391 95 IWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF-DESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY 173 (231)
Q Consensus 95 ~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 173 (231)
..++...... .+..+.. ..++++++.|+-.+. ...|.+.++..+... .+.. +... ..+.|++.+|+-...
T Consensus 133 ~~~~dGs~~~-~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~-~l~~--~~~~-~~~~P~g~~iy~t~~ 203 (302)
T 3s25_A 133 RIRIDGEEKK-KIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEA-LFYD--CNCY-KPVVLDDTNVYYMDV 203 (302)
T ss_dssp EEETTSCCCE-EEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEE-EEEC--SCEE-EEEEEETTEEEEEEG
T ss_pred EEECCCCCeE-EEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEE-EEeC--CCcc-ceeeecCCEEEEEEc
Confidence 5566543333 3332222 345677777775554 677888898766533 3322 2232 345688888876654
Q ss_pred C--CeEEEEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEE
Q psy4391 174 D--GLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAA 214 (231)
Q Consensus 174 d--g~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~ 214 (231)
+ ..|..-++.... ...+.. ..+ ..++|+|++|+.+
T Consensus 204 ~~~~~I~~~~ldG~~-~~~Lt~---~~~--~~~~~~g~~Iy~~ 240 (302)
T 3s25_A 204 NRDNAIVHVNINNPN-PVVLTE---ANI--EHYNVYGSLIFYQ 240 (302)
T ss_dssp GGTTEEEEECSSSCC-CEECSC---SCE--EEEEEETTEEEEE
T ss_pred CCCcEEEEEECCCCC-eEEEeC---CCc--ceEEECCCEEEEE
Confidence 3 366666776544 222221 122 2356666666654
No 318
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.25 E-value=0.046 Score=42.83 Aligned_cols=145 Identities=17% Similarity=0.191 Sum_probs=93.4
Q ss_pred ECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecc----cccEEEEEECCCCCEEEEecCCCcEEEEeCCCce--------
Q psy4391 35 FSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH----KLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGK-------- 102 (231)
Q Consensus 35 ~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~-------- 102 (231)
...+|..++.+. ++.||.-++.+....+.+... ...+..+..+|+|+++|..+ +..|.+..+..+.
T Consensus 28 ~~~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~ 105 (452)
T 3pbp_A 28 SSQNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSI 105 (452)
T ss_dssp EETTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHH
T ss_pred EEcCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCccccc
Confidence 345666666543 567777676533333344332 22577799999999988775 5588888876321
Q ss_pred ----eeeeecC------CCcceEEEEECCC---CCEEEEeecCCcEEEEECCCCceee-ec---------cCCCCCeEEE
Q psy4391 103 ----CLKTLKG------HSNYVFCCNFNPQ---SNLIVSGSFDESVRIWDVRTGKCLK-TL---------PAHSDPVSAV 159 (231)
Q Consensus 103 ----~~~~~~~------~~~~v~~~~~~~~---~~~l~~~~~d~~i~v~d~~~~~~~~-~~---------~~~~~~v~~~ 159 (231)
..+.+.- ....|..+.|+|- +..|++-..|+.|++||+....... .+ ......+.++
T Consensus 106 ~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~ 185 (452)
T 3pbp_A 106 QDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDL 185 (452)
T ss_dssp HHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEE
T ss_pred ccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEE
Confidence 0111111 2466899999995 4678899999999999998632110 11 1122467899
Q ss_pred EEcCCCCeEEEEe--cCCeEEEEe
Q psy4391 160 HFNRDGSLIVSSS--YDGLCRIWD 181 (231)
Q Consensus 160 ~~~~~~~~l~~~~--~dg~i~v~d 181 (231)
+|..++-.|+..+ .+|.|+-..
T Consensus 186 ~Fg~~~lTLYvl~~t~~GDIYAlc 209 (452)
T 3pbp_A 186 EFSKDGLTLYCLNTTEGGDIFAFY 209 (452)
T ss_dssp EECTTSSCEEEEECTTSCEEEEES
T ss_pred EEcCCCcEEEEEecCCCCCEEEEC
Confidence 9999887777744 788886543
No 319
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.23 E-value=0.042 Score=42.14 Aligned_cols=153 Identities=12% Similarity=0.186 Sum_probs=86.8
Q ss_pred ccEEEEEECCCCCEEEEe------------cCCCcEEEEeCCCc--eee-eeecC-----CCcceEEEEECC--CCC-EE
Q psy4391 70 LGISDVAWSSDSRLLVSG------------SDDKTLKIWELSSG--KCL-KTLKG-----HSNYVFCCNFNP--QSN-LI 126 (231)
Q Consensus 70 ~~v~~~~~~~~~~~l~~~------------~~~g~i~~~d~~~~--~~~-~~~~~-----~~~~v~~~~~~~--~~~-~l 126 (231)
.+..+++..|+|..++++ ..+|.|.++|.++. +.. ..+.+ ..-....+.+.+ +++ .|
T Consensus 50 ~G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L 129 (355)
T 3sre_A 50 NGSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYL 129 (355)
T ss_dssp SCCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEE
T ss_pred CCcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEE
Confidence 355677778877655554 26899999998742 211 12222 112445566544 343 34
Q ss_pred EEe-ec--CCcEEEEECCCCc-e---eeeccCC-CCCeEEEEEcCCCCeEEEEe-----------------cCCeEEEEe
Q psy4391 127 VSG-SF--DESVRIWDVRTGK-C---LKTLPAH-SDPVSAVHFNRDGSLIVSSS-----------------YDGLCRIWD 181 (231)
Q Consensus 127 ~~~-~~--d~~i~v~d~~~~~-~---~~~~~~~-~~~v~~~~~~~~~~~l~~~~-----------------~dg~i~v~d 181 (231)
+.+ .. +..+.+|++..+. . +..+... -.....+.+.++|.++++.. ..|.+..+|
T Consensus 130 ~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d 209 (355)
T 3sre_A 130 LVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYS 209 (355)
T ss_dssp EEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEEC
T ss_pred EEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEE
Confidence 333 22 4567787765432 1 2222211 23567899999998777654 124565566
Q ss_pred CCCCceeeeeecCCCCCeEEEEECCCCCEEEEEe-CCCeEEEEeCC
Q psy4391 182 TASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT-LDNTLKLWDSY 226 (231)
Q Consensus 182 ~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s-~d~~v~vwd~~ 226 (231)
.. + ...+.. .-..-+.++|+|||+.|+++. ..++|..||..
T Consensus 210 ~~--~-~~~~~~-~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~ 251 (355)
T 3sre_A 210 PN--D-VRVVAE-GFDFANGINISPDGKYVYIAELLAHKIHVYEKH 251 (355)
T ss_dssp TT--C-CEEEEE-EESSEEEEEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred CC--e-EEEeec-CCcccCcceECCCCCEEEEEeCCCCeEEEEEEC
Confidence 53 2 222222 122347899999998887765 46799999853
No 320
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.20 E-value=0.046 Score=41.93 Aligned_cols=143 Identities=12% Similarity=0.058 Sum_probs=76.7
Q ss_pred cccEEEEEECCCCCEEEEecCCCcEEEEeCCCceee---eee----cCCCcceEEEEECCC---CCEEEEe-ec------
Q psy4391 69 KLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCL---KTL----KGHSNYVFCCNFNPQ---SNLIVSG-SF------ 131 (231)
Q Consensus 69 ~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~---~~~----~~~~~~v~~~~~~~~---~~~l~~~-~~------ 131 (231)
......++|.|+|+.++++...|.|++++... ... ..+ .........++++|+ +..|+.. ..
T Consensus 17 l~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g-~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~ 95 (353)
T 2g8s_A 17 LDHPWALAFLPDNHGMLITLRGGELRHWQAGK-GLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGK 95 (353)
T ss_dssp ESSEEEEEECSTTCCEEEEETTTEEEEEETTT-EECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSC
T ss_pred CCCcEEEEEcCCCCEEEEEeCCceEEEEeCCC-ceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCC
Confidence 34568899999998344555679999998543 221 111 112234678999995 4444443 22
Q ss_pred -CCcEEEEECCCC--c--ee----eeccC---CCCCeEEEEEcCCCCeEEEEec-------------CCeEEEEeCCCCc
Q psy4391 132 -DESVRIWDVRTG--K--CL----KTLPA---HSDPVSAVHFNRDGSLIVSSSY-------------DGLCRIWDTASGQ 186 (231)
Q Consensus 132 -d~~i~v~d~~~~--~--~~----~~~~~---~~~~v~~~~~~~~~~~l~~~~~-------------dg~i~v~d~~~~~ 186 (231)
...|..+++..+ . .. ..+.. .......++|.|||.++++.+. .|.|.-++....-
T Consensus 96 ~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~ 175 (353)
T 2g8s_A 96 AGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEI 175 (353)
T ss_dssp EEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCC
T ss_pred ceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCC
Confidence 235666666432 1 11 11111 1122356999999976665433 2466666665320
Q ss_pred ------------eeeeeecCCCCCeEEEEECC-CCCEEEE
Q psy4391 187 ------------CLKTLIDDDNPPVSFVKFSP-NGKYILA 213 (231)
Q Consensus 187 ------------~~~~~~~~~~~~i~~~~~s~-~g~~l~~ 213 (231)
....+.... .....++|+| +|+++++
T Consensus 176 p~~npf~~~~~~~~~i~a~G~-rnp~gl~~d~~~g~l~~~ 214 (353)
T 2g8s_A 176 PDDNPFIKESGVRAEIWSYGI-RNPQGMAMNPWSNALWLN 214 (353)
T ss_dssp CTTCTTTTSTTSCTTEEEECC-SEEEEEEEETTTTEEEEE
T ss_pred CCCCCCcCCCCCCccEEEEcC-cCccceEEECCCCCEEEE
Confidence 111111111 2245689999 5655444
No 321
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.19 E-value=0.047 Score=41.90 Aligned_cols=143 Identities=13% Similarity=0.077 Sum_probs=78.5
Q ss_pred cccEEEEEECCCCCEEEEecCCCcEEEEeCCCce-eeeeec---CCCcceEEEEECCC---CCEEEEeec----C----C
Q psy4391 69 KLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGK-CLKTLK---GHSNYVFCCNFNPQ---SNLIVSGSF----D----E 133 (231)
Q Consensus 69 ~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~-~~~~~~---~~~~~v~~~~~~~~---~~~l~~~~~----d----~ 133 (231)
......++|.|+|++ +++..+|.|++++. +++ .+..+. ........++++|+ +..|+.... + .
T Consensus 28 l~~P~~ia~~pdG~l-~V~e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~ 105 (354)
T 3a9g_A 28 LEVPWSIAPLGGGRY-LVTERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRN 105 (354)
T ss_dssp CSCEEEEEEEETTEE-EEEETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred CCCCeEEEEcCCCeE-EEEeCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence 345778999999984 45556699998874 343 222211 12345778999997 444444332 3 5
Q ss_pred cEEEEECCCC--c-----ee-eeccC-CCCCeEEEEEcCCCCeEEEEec-------------CCeEEEEeCCCCc-----
Q psy4391 134 SVRIWDVRTG--K-----CL-KTLPA-HSDPVSAVHFNRDGSLIVSSSY-------------DGLCRIWDTASGQ----- 186 (231)
Q Consensus 134 ~i~v~d~~~~--~-----~~-~~~~~-~~~~v~~~~~~~~~~~l~~~~~-------------dg~i~v~d~~~~~----- 186 (231)
.|..|+...+ . .+ ..+.. .......++|.|||.++++.+. .|.|.-++....-
T Consensus 106 ~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~np 185 (354)
T 3a9g_A 106 RVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNP 185 (354)
T ss_dssp EEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSS
T ss_pred EEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCC
Confidence 6777776543 1 11 11221 1123456899999987766432 2456666654220
Q ss_pred --eeeeeecCCCCCeEEEEECC-CCCEEEEE
Q psy4391 187 --CLKTLIDDDNPPVSFVKFSP-NGKYILAA 214 (231)
Q Consensus 187 --~~~~~~~~~~~~i~~~~~s~-~g~~l~~~ 214 (231)
....+...... ...++|+| +|+++++-
T Consensus 186 f~~~~i~a~G~rn-p~Gla~d~~~g~l~v~d 215 (354)
T 3a9g_A 186 FPNSPIWSYGHRN-PQGIDWHRASGVMVATE 215 (354)
T ss_dssp STTCCEEEECCSC-CCEEEECTTTCCEEEEE
T ss_pred CCCCcEEEEccCC-cceEEEeCCCCCEEEEe
Confidence 01111112222 24689999 66655543
No 322
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=97.17 E-value=0.0014 Score=49.96 Aligned_cols=142 Identities=11% Similarity=0.055 Sum_probs=82.4
Q ss_pred CEEEEEeCCCcEEEeecCCCcEEEEEeccc-ccEEEEEE--CC-CCCEEEEe-cCCCcEEEEeCCCceeeeeecC----C
Q psy4391 40 EWLASSSADKLIKIWGAYDGKFEKTISGHK-LGISDVAW--SS-DSRLLVSG-SDDKTLKIWELSSGKCLKTLKG----H 110 (231)
Q Consensus 40 ~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~-~~v~~~~~--~~-~~~~l~~~-~~~g~i~~~d~~~~~~~~~~~~----~ 110 (231)
..++.++.||.|.-+|..+++....+.... .++....- .+ ++..++.. ..||.|..++..++.....+.. .
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 467888999999999999998888776541 22222110 01 22333333 5899999999888754433221 1
Q ss_pred CcceEE---EEE-C----CCCCEEEEeecCCcEEEEECCCCceeeeccCCC--CC-----eEEEEEc-----CCCCeEEE
Q psy4391 111 SNYVFC---CNF-N----PQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHS--DP-----VSAVHFN-----RDGSLIVS 170 (231)
Q Consensus 111 ~~~v~~---~~~-~----~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~--~~-----v~~~~~~-----~~~~~l~~ 170 (231)
.+++.. ..+ . ..+..+++|+.++++...|+++|+.+..+.... +. ..|.... ..+..++.
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~i 170 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVI 170 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEEE
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEEE
Confidence 111211 000 0 145678899999999999999999988876432 10 0111110 12345666
Q ss_pred EecCCeEEEEe
Q psy4391 171 SSYDGLCRIWD 181 (231)
Q Consensus 171 ~~~dg~i~v~d 181 (231)
+..+..+.+.+
T Consensus 171 g~~~y~v~~~~ 181 (339)
T 2be1_A 171 GKTIFELGIHS 181 (339)
T ss_dssp EEEEEECEECC
T ss_pred ecceEEEEEEC
Confidence 66666666655
No 323
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=97.14 E-value=0.044 Score=41.07 Aligned_cols=163 Identities=11% Similarity=0.015 Sum_probs=92.6
Q ss_pred ECCCCCEEEEEeC--CCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEecCC--------------CcEEEEeC
Q psy4391 35 FSPNGEWLASSSA--DKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDD--------------KTLKIWEL 98 (231)
Q Consensus 35 ~~~~~~~l~~~~~--dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~--------------g~i~~~d~ 98 (231)
|+++|.+|+.... ++.|...+.... ....+.... + --+++++..|+.+... ..|+..++
T Consensus 21 ~~~~g~~iy~~n~~d~~~ly~~~~dg~-~~~~l~~~~--~--~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~ 95 (302)
T 3s25_A 21 FCESDGEVFFSNTNDNGRLYAMNIDGS-NIHKLSNDT--A--MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKR 95 (302)
T ss_dssp EEEETTEEEEEEGGGTTEEEEEETTSC-SCEEEEEEE--E--EEEEECSSEEEEEEECC------CCSSCCSEEEEEEET
T ss_pred EEEeCCEEEEEeCCCCceEEEEcCCCC-CCEEccCCc--e--eeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeC
Confidence 3457777766542 455655555333 333443221 2 3457888888766543 35777777
Q ss_pred CCceeeeeecCCCcceEEEEECCCCCEEEEee----cCCcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeEEEEec-
Q psy4391 99 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS----FDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY- 173 (231)
Q Consensus 99 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~- 173 (231)
+..+....... . ...++++++.|+-.. .+..|+..++.... ...+..+.. .+++++++.|+-.+.
T Consensus 96 dg~~~~~l~~~-~----~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~-~~~lt~~~~----~~~~~~g~~iy~t~~g 165 (302)
T 3s25_A 96 NGHGSTVLDPD-P----CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEE-KKKIKNHYL----FTCNTSDRYFYYNNPK 165 (302)
T ss_dssp TSCCCEEEECS-C----EEEEEEETTEEEEEEESSSSCEEEEEEETTSCC-CEEEESSCC----CCSEEETTEEEEECTT
T ss_pred CCCcceEeecC-C----ccEEEEeCCEEEEEeecCCCCceEEEEECCCCC-eEEEeCCCc----eEeeEECCEEEEEeCC
Confidence 76553332221 1 225677888888765 34457777776433 334433322 346778888876654
Q ss_pred CCeEEEEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEeCC
Q psy4391 174 DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD 217 (231)
Q Consensus 174 dg~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d 217 (231)
...|.+.++..+... .+.. . ... ..++|++.+|+....+
T Consensus 166 ~~~Iy~~~l~g~~~~-~l~~-~--~~~-~~~~P~g~~iy~t~~~ 204 (302)
T 3s25_A 166 NGQLYRYDTASQSEA-LFYD-C--NCY-KPVVLDDTNVYYMDVN 204 (302)
T ss_dssp TCCEEEEETTTTEEE-EEEC-S--CEE-EEEEEETTEEEEEEGG
T ss_pred CceEEEEECCCCCEE-EEeC-C--Ccc-ceeeecCCEEEEEEcC
Confidence 568888888766533 3322 1 222 3456888888876654
No 324
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=96.94 E-value=0.12 Score=43.60 Aligned_cols=189 Identities=12% Similarity=0.108 Sum_probs=100.1
Q ss_pred CCCCEEEEEeCC----CcEEEeecCCCcEEEEE-e-------cccccEEEEEECCCCCEEEEecCC------CcEEEEeC
Q psy4391 37 PNGEWLASSSAD----KLIKIWGAYDGKFEKTI-S-------GHKLGISDVAWSSDSRLLVSGSDD------KTLKIWEL 98 (231)
Q Consensus 37 ~~~~~l~~~~~d----g~i~i~~~~~~~~~~~~-~-------~~~~~v~~~~~~~~~~~l~~~~~~------g~i~~~d~ 98 (231)
.++..++.|+.+ ..+.+||..+......- . .....-....+..+++.++.|+.+ ..+.+||.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 456677777653 35788888777655433 1 111112222332266777777653 35788998
Q ss_pred CCceeeee--ecCCCcceEEEEECCCCCEEEEeecCC--cEEEEECCCCceeeec-----cCCCCCeEEEEEcCC-CCeE
Q psy4391 99 SSGKCLKT--LKGHSNYVFCCNFNPQSNLIVSGSFDE--SVRIWDVRTGKCLKTL-----PAHSDPVSAVHFNRD-GSLI 168 (231)
Q Consensus 99 ~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~v~d~~~~~~~~~~-----~~~~~~v~~~~~~~~-~~~l 168 (231)
.+.+.... +......- ++..-.++.+++.|+.++ .+.+||+.+......- ........++.+..+ ++++
T Consensus 476 ~t~~W~~~~~~p~~R~~h-~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iy 554 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFRH-SACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGI 554 (695)
T ss_dssp TTTEEEECCCCSBCCBSC-EEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEE
T ss_pred CCCcEEECCCCCCCcccc-eEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEE
Confidence 87543322 11111111 222323778888887654 6899999876542221 111111223455544 6677
Q ss_pred EEEec--C-----CeEEEEeCCCCce-----eeeeecC--CCCCeEEEEECCCCCEEEEEeC--------CCeEEEEeCC
Q psy4391 169 VSSSY--D-----GLCRIWDTASGQC-----LKTLIDD--DNPPVSFVKFSPNGKYILAATL--------DNTLKLWDSY 226 (231)
Q Consensus 169 ~~~~~--d-----g~i~v~d~~~~~~-----~~~~~~~--~~~~i~~~~~s~~g~~l~~~s~--------d~~v~vwd~~ 226 (231)
+.|+. + ..+.+||+.+.+. ...+... ....-..+....+++.++.|+. .+.|.+||..
T Consensus 555 v~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~ 634 (695)
T 2zwa_A 555 ILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPL 634 (695)
T ss_dssp EECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETT
T ss_pred EECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECC
Confidence 77765 2 4688999988762 2222110 1111112233333677777774 3468888863
No 325
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.92 E-value=0.11 Score=41.37 Aligned_cols=104 Identities=13% Similarity=0.189 Sum_probs=60.7
Q ss_pred cccEEEEEECCCCCEEEEecCCCcEEEEeCCCcee--eeeecC------CCcceEEEEECCC---CCEEEEeec------
Q psy4391 69 KLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKC--LKTLKG------HSNYVFCCNFNPQ---SNLIVSGSF------ 131 (231)
Q Consensus 69 ~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~--~~~~~~------~~~~v~~~~~~~~---~~~l~~~~~------ 131 (231)
......++|.|+|+++++-...+.|++++..++.. +..+.. .......++++|+ +..|+....
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence 34567899999998776654445788887654432 222221 2345678999995 455544432
Q ss_pred -------CCcEEEEECCCC--c-----eee-eccC-CCCCeEEEEEcCCCCeEEEEe
Q psy4391 132 -------DESVRIWDVRTG--K-----CLK-TLPA-HSDPVSAVHFNRDGSLIVSSS 172 (231)
Q Consensus 132 -------d~~i~v~d~~~~--~-----~~~-~~~~-~~~~v~~~~~~~~~~~l~~~~ 172 (231)
...|.-+++..+ . .+. .+.. .......|+|.|||.++++.+
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 234555554322 1 111 1221 124578899999998777654
No 326
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.92 E-value=0.028 Score=43.12 Aligned_cols=102 Identities=14% Similarity=0.161 Sum_probs=56.6
Q ss_pred cceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEE-------ecccccEEEEEECCC---CCEEEEec-C-------
Q psy4391 28 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-------SGHKLGISDVAWSSD---SRLLVSGS-D------- 89 (231)
Q Consensus 28 ~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~-------~~~~~~v~~~~~~~~---~~~l~~~~-~------- 89 (231)
..-..++|.|+|+.|+.+...|.|++++.. +.....+ .........++++|+ +..|+.+. .
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~ 96 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKA 96 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence 456899999999933445678999988742 3221111 112345788999995 44444332 2
Q ss_pred CCcEEEEeCCCc-----eeeee---ecC---CCcceEEEEECCCCCEEEEee
Q psy4391 90 DKTLKIWELSSG-----KCLKT---LKG---HSNYVFCCNFNPQSNLIVSGS 130 (231)
Q Consensus 90 ~g~i~~~d~~~~-----~~~~~---~~~---~~~~v~~~~~~~~~~~l~~~~ 130 (231)
...|..++.... ..... +.. .......+.|.|+|.+.++.+
T Consensus 97 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 148 (353)
T 2g8s_A 97 GTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALG 148 (353)
T ss_dssp EEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEEC
T ss_pred eeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEEC
Confidence 224555655432 11111 111 111234689999997666643
No 327
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.86 E-value=0.087 Score=39.40 Aligned_cols=177 Identities=11% Similarity=0.062 Sum_probs=88.5
Q ss_pred EEEEeCCCcEEEeecCCCcEEE-EEecccccEEEEEECCCCCEEEEecC-----C------CcEEEEeCCCceeeee--e
Q psy4391 42 LASSSADKLIKIWGAYDGKFEK-TISGHKLGISDVAWSSDSRLLVSGSD-----D------KTLKIWELSSGKCLKT--L 107 (231)
Q Consensus 42 l~~~~~dg~i~i~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~-----~------g~i~~~d~~~~~~~~~--~ 107 (231)
++.|+ ..+..||..+.+... .+.....+........++..++.|+. . ..+..||..+.+-... +
T Consensus 8 ~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~ 85 (315)
T 4asc_A 8 FMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPL 85 (315)
T ss_dssp EEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCB
T ss_pred EEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCC
Confidence 34454 578899988777543 11111122222233456777777763 1 1277888887653221 1
Q ss_pred cCCCcceEEEEECCCCCEEEEeecC--------CcEEEEECCCCceeee--ccCCCCCeEEEEEcCCCCeEEEEec-C--
Q psy4391 108 KGHSNYVFCCNFNPQSNLIVSGSFD--------ESVRIWDVRTGKCLKT--LPAHSDPVSAVHFNRDGSLIVSSSY-D-- 174 (231)
Q Consensus 108 ~~~~~~v~~~~~~~~~~~l~~~~~d--------~~i~v~d~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~-d-- 174 (231)
.........+.+ ++.+++.|+.+ ..+.+||+.+.+-... +......-.++. .++++++.|+. +
T Consensus 86 p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~ 161 (315)
T 4asc_A 86 PSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS--HMDLVYVIGGKGSDR 161 (315)
T ss_dssp SSCEESCEEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCTTS
T ss_pred CcchhceeEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE--ECCEEEEEeCCCCCC
Confidence 111111111222 56677777642 3488999987653221 111111111222 35667777775 2
Q ss_pred ---CeEEEEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEeCCC-----eEEEEeC
Q psy4391 175 ---GLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN-----TLKLWDS 225 (231)
Q Consensus 175 ---g~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~-----~v~vwd~ 225 (231)
..+.+||+.+.+....-.......-..++ .-+++.++.|+.++ .+.+||.
T Consensus 162 ~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~yd~ 219 (315)
T 4asc_A 162 KCLNKMCVYDPKKFEWKELAPMQTARSLFGAT-VHDGRIIVAAGVTDTGLTSSAEVYSI 219 (315)
T ss_dssp CBCCCEEEEETTTTEEEECCCCSSCCBSCEEE-EETTEEEEEEEECSSSEEEEEEEEET
T ss_pred cccceEEEEeCCCCeEEECCCCCCchhceEEE-EECCEEEEEeccCCCCccceEEEEEC
Confidence 46889999887543221111111111122 22567777777654 5777775
No 328
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=96.77 E-value=0.11 Score=39.29 Aligned_cols=159 Identities=11% Similarity=0.199 Sum_probs=102.2
Q ss_pred ccceEEEEECCCCCEEEEEe-------CCCcEEEeecCCCcEEEEEecccccEEEEEECC--C-CCEEEEecC---CCcE
Q psy4391 27 TKAVSSVKFSPNGEWLASSS-------ADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS--D-SRLLVSGSD---DKTL 93 (231)
Q Consensus 27 ~~~i~~~~~~~~~~~l~~~~-------~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~--~-~~~l~~~~~---~g~i 93 (231)
...|..-.-+++.+|++..+ -.|.+++|..+ .+..+.+.+|......+...- . .+.++.+.+ .+.+
T Consensus 151 ~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~e-r~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kL 229 (365)
T 2xzh_A 151 GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVD-RKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKL 229 (365)
T ss_dssp TCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETT-TTEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEE
T ss_pred cceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeec-ccccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEE
Confidence 35688888899999876432 23678899875 445567777765443332221 1 123333332 2578
Q ss_pred EEEeCCCc---ee-----eeee----cCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeeccCCCCCeEEEEE
Q psy4391 94 KIWELSSG---KC-----LKTL----KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHF 161 (231)
Q Consensus 94 ~~~d~~~~---~~-----~~~~----~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~ 161 (231)
++-++... .. ...+ ....+...++..++....++.-+.-|.+++||++++.++..-+....+|..-+.
T Consensus 230 hIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~ta~ 309 (365)
T 2xzh_A 230 HIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAP 309 (365)
T ss_dssp EEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE
T ss_pred EEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCceEEecc
Confidence 88887432 11 0111 123456678888988899999999999999999999998877666677766665
Q ss_pred cCCCCeEEEEecCCeEEEEeCCCCc
Q psy4391 162 NRDGSLIVSSSYDGLCRIWDTASGQ 186 (231)
Q Consensus 162 ~~~~~~l~~~~~dg~i~v~d~~~~~ 186 (231)
+.+..=+++....|.|.-..+.+.+
T Consensus 310 ~~~~~Gi~~Vnr~GqVl~v~v~~~~ 334 (365)
T 2xzh_A 310 HEATAGIIGVNRKGQVLSVCVEEEN 334 (365)
T ss_dssp EGGGTEEEEEETTCEEEEEEECTTT
T ss_pred cCCCCcEEEEcCCCEEEEEEECccc
Confidence 5554455566677777666555544
No 329
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.72 E-value=0.11 Score=38.80 Aligned_cols=171 Identities=12% Similarity=0.092 Sum_probs=83.4
Q ss_pred cEEEeecCCCcEEEE-EecccccEEEEEECCCCCEEEEecC----CC-------cEEEEeCCCceeeee--ecCCCcceE
Q psy4391 50 LIKIWGAYDGKFEKT-ISGHKLGISDVAWSSDSRLLVSGSD----DK-------TLKIWELSSGKCLKT--LKGHSNYVF 115 (231)
Q Consensus 50 ~i~i~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~----~g-------~i~~~d~~~~~~~~~--~~~~~~~v~ 115 (231)
.+..||..+.+.... +..............++..++.|+. ++ .+..||..+.+.... +........
T Consensus 25 ~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~ 104 (318)
T 2woz_A 25 AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFG 104 (318)
T ss_dssp EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCE
T ss_pred ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccc
Confidence 378888877765441 1111112222233456677777773 11 177888877653321 111111111
Q ss_pred EEEECCCCCEEEEeecC-------CcEEEEECCCCceeeeccCCCCCe--EEEEEcCCCCeEEEEecC------CeEEEE
Q psy4391 116 CCNFNPQSNLIVSGSFD-------ESVRIWDVRTGKCLKTLPAHSDPV--SAVHFNRDGSLIVSSSYD------GLCRIW 180 (231)
Q Consensus 116 ~~~~~~~~~~l~~~~~d-------~~i~v~d~~~~~~~~~~~~~~~~v--~~~~~~~~~~~l~~~~~d------g~i~v~ 180 (231)
.+.+ ++.+++.|+.+ ..+.+||+.+.+-... .....+. .+++. .++++++.|+.+ ..+.+|
T Consensus 105 ~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~-~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~y 180 (318)
T 2woz_A 105 LGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEV-KNLPIKVYGHNVIS-HNGMIYCLGGKTDDKKCTNRVFIY 180 (318)
T ss_dssp EEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEE-CCCSSCEESCEEEE-ETTEEEEECCEESSSCBCCCEEEE
T ss_pred eEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEeEC-CCCCCcccccEEEE-ECCEEEEEcCCCCCCCccceEEEE
Confidence 2222 56777777754 2477889887653322 1111111 01122 356666776642 358899
Q ss_pred eCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEeCC-----CeEEEEeC
Q psy4391 181 DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD-----NTLKLWDS 225 (231)
Q Consensus 181 d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d-----~~v~vwd~ 225 (231)
|+.+.+....-.......-..++. -+++.++.|+.+ ..+.+||.
T Consensus 181 d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~ 229 (318)
T 2woz_A 181 NPKKGDWKDLAPMKTPRSMFGVAI-HKGKIVIAGGVTEDGLSASVEAFDL 229 (318)
T ss_dssp ETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEEEEEETTEEEEEEEEEET
T ss_pred cCCCCEEEECCCCCCCcccceEEE-ECCEEEEEcCcCCCCccceEEEEEC
Confidence 998876433211111111111222 256777777643 35667775
No 330
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.68 E-value=0.17 Score=40.23 Aligned_cols=105 Identities=10% Similarity=0.114 Sum_probs=59.8
Q ss_pred ccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEE--Eec------ccccEEEEEECCC---CCEEEEecC------
Q psy4391 27 TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT--ISG------HKLGISDVAWSSD---SRLLVSGSD------ 89 (231)
Q Consensus 27 ~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~--~~~------~~~~v~~~~~~~~---~~~l~~~~~------ 89 (231)
-.....++|.|+|+++++-...+.|++++..++..... +.. ....+..++|+|+ +..|+.+..
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence 34667999999999777644334688877654543222 211 2356779999995 444443331
Q ss_pred -------CCcEEEEeCCCc-------eeee-eecC-CCcceEEEEECCCCCEEEEeec
Q psy4391 90 -------DKTLKIWELSSG-------KCLK-TLKG-HSNYVFCCNFNPQSNLIVSGSF 131 (231)
Q Consensus 90 -------~g~i~~~d~~~~-------~~~~-~~~~-~~~~v~~~~~~~~~~~l~~~~~ 131 (231)
...|.-++.... +.+. .+.. .......+.|.|+|.+.++.+.
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 124554544321 1111 1221 1223578899999988776543
No 331
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.67 E-value=0.024 Score=43.31 Aligned_cols=125 Identities=12% Similarity=-0.060 Sum_probs=54.9
Q ss_pred CcEEEEeCCCceeeee--ecCCCcceEEEEECCCCCEEEEeec------CCcEEEEEC--CCCceee--eccCCCCCeEE
Q psy4391 91 KTLKIWELSSGKCLKT--LKGHSNYVFCCNFNPQSNLIVSGSF------DESVRIWDV--RTGKCLK--TLPAHSDPVSA 158 (231)
Q Consensus 91 g~i~~~d~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~------d~~i~v~d~--~~~~~~~--~~~~~~~~v~~ 158 (231)
..+.+||..+.+-... +......-.++.. -++.+++.|+. ...+..||+ .+.+... .+.........
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~ 246 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVN-KGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGG 246 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEE-ETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSC
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEE-ECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccc
Confidence 4688999887653322 2211111011222 25666677654 235777877 4433211 11111111111
Q ss_pred EEEcCCCCeEEEEecC----------------------CeEEEEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEeC
Q psy4391 159 VHFNRDGSLIVSSSYD----------------------GLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATL 216 (231)
Q Consensus 159 ~~~~~~~~~l~~~~~d----------------------g~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~ 216 (231)
.+...++++++.|+.+ ..+.+||+.+.+.... ...........+...+++.++.|+.
T Consensus 247 ~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~-~~~p~~r~~~~~~~~~~~i~v~GG~ 325 (357)
T 2uvk_A 247 FAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKS-GELSQGRAYGVSLPWNNSLLIIGGE 325 (357)
T ss_dssp EEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEE-EECSSCCBSSEEEEETTEEEEEEEE
T ss_pred eEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeC-CCCCCCcccceeEEeCCEEEEEeee
Confidence 1222356677777632 2477899887654332 1111111111223346788888885
Q ss_pred C
Q psy4391 217 D 217 (231)
Q Consensus 217 d 217 (231)
+
T Consensus 326 ~ 326 (357)
T 2uvk_A 326 T 326 (357)
T ss_dssp C
T ss_pred C
Confidence 4
No 332
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.63 E-value=0.15 Score=39.02 Aligned_cols=185 Identities=12% Similarity=0.117 Sum_probs=96.9
Q ss_pred cceEEEEECCC---CCEEEEEeC----C----CcEEEeecCCC--cE--EEE----Eec-ccccEEEEEECCCCCEEEEe
Q psy4391 28 KAVSSVKFSPN---GEWLASSSA----D----KLIKIWGAYDG--KF--EKT----ISG-HKLGISDVAWSSDSRLLVSG 87 (231)
Q Consensus 28 ~~i~~~~~~~~---~~~l~~~~~----d----g~i~i~~~~~~--~~--~~~----~~~-~~~~v~~~~~~~~~~~l~~~ 87 (231)
.....++++|+ +..|+.+.. + +.|..|+.... .. ... +.. .......++|.|||.++++.
T Consensus 73 ~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~ 152 (354)
T 3a9g_A 73 AGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITT 152 (354)
T ss_dssp CSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEEC
T ss_pred CceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEE
Confidence 45788999997 555544332 2 56667766443 11 111 211 11123568999999866664
Q ss_pred cCC-------------CcEEEEeCCCce-------eeeee-cCCCcceEEEEECC-CCCEEEEeecCC---cEEEEECCC
Q psy4391 88 SDD-------------KTLKIWELSSGK-------CLKTL-KGHSNYVFCCNFNP-QSNLIVSGSFDE---SVRIWDVRT 142 (231)
Q Consensus 88 ~~~-------------g~i~~~d~~~~~-------~~~~~-~~~~~~v~~~~~~~-~~~~l~~~~~d~---~i~v~d~~~ 142 (231)
+.. |.|.-++.+..- ....+ .++. ....++|+| +++++++-.... .|.+.. .
T Consensus 153 G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~i~a~G~r-np~Gla~d~~~g~l~v~d~g~~~~dei~~i~--~ 229 (354)
T 3a9g_A 153 GDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPNSPIWSYGHR-NPQGIDWHRASGVMVATEHGPVGHDEVNIIL--K 229 (354)
T ss_dssp CCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTTCCEEEECCS-CCCEEEECTTTCCEEEEECCSSSCCEEEEEC--T
T ss_pred CCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCCCcEEEEccC-CcceEEEeCCCCCEEEEecCCCCCcEEEEec--C
Confidence 332 345555544210 00111 1222 244688999 566655543322 233322 1
Q ss_pred Cc------------------eeeeccCCCCCeEEEEEc-------CCCCeEEEEecCCeEEEEeCCCC-cee--eeeecC
Q psy4391 143 GK------------------CLKTLPAHSDPVSAVHFN-------RDGSLIVSSSYDGLCRIWDTASG-QCL--KTLIDD 194 (231)
Q Consensus 143 ~~------------------~~~~~~~~~~~v~~~~~~-------~~~~~l~~~~~dg~i~v~d~~~~-~~~--~~~~~~ 194 (231)
+. .+..+.........++|. .+|.++++....+.|...++... +.. ..+...
T Consensus 230 G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~ 309 (354)
T 3a9g_A 230 GGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKN 309 (354)
T ss_dssp TCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTT
T ss_pred CCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccC
Confidence 11 111221112356778883 46767766666778888888753 221 233322
Q ss_pred CCCCeEEEEECCCCCEEEEEe
Q psy4391 195 DNPPVSFVKFSPNGKYILAAT 215 (231)
Q Consensus 195 ~~~~i~~~~~s~~g~~l~~~s 215 (231)
....+..+++.|||.++++..
T Consensus 310 ~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 310 VFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp TSCCEEEEEECTTSCEEEEEC
T ss_pred CCCCeeEEEECCCCcEEEEEe
Confidence 234577899999997666654
No 333
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.47 E-value=0.2 Score=38.34 Aligned_cols=149 Identities=13% Similarity=0.113 Sum_probs=82.3
Q ss_pred EEecccccEEEEEECCCCCEEEEecCCCcEEEEeCCCcee--eeee----cCCCcceEEEEECCC---CCEEEEe---ec
Q psy4391 64 TISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKC--LKTL----KGHSNYVFCCNFNPQ---SNLIVSG---SF 131 (231)
Q Consensus 64 ~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~--~~~~----~~~~~~v~~~~~~~~---~~~l~~~---~~ 131 (231)
.+.........++|.|+|+.+++--..|.|++++..+++. +..+ .........++++|+ +..|+.. ..
T Consensus 26 ~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~ 105 (347)
T 3das_A 26 TVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSAS 105 (347)
T ss_dssp EEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSS
T ss_pred EeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCC
Confidence 3443445678999999998776665589999998765443 2212 122345788999995 3444332 23
Q ss_pred CCcEEEEECCCCc----------ee-eecc-CCCCCeEEEEEcCCCCeEEEEec-------------CCeEEEEeCCCCc
Q psy4391 132 DESVRIWDVRTGK----------CL-KTLP-AHSDPVSAVHFNRDGSLIVSSSY-------------DGLCRIWDTASGQ 186 (231)
Q Consensus 132 d~~i~v~d~~~~~----------~~-~~~~-~~~~~v~~~~~~~~~~~l~~~~~-------------dg~i~v~d~~~~~ 186 (231)
+..|.-|.+..+. .+ ..+. ........|.|.|||.++++.+. .|.|.-++....-
T Consensus 106 ~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~i 185 (347)
T 3das_A 106 DNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEP 185 (347)
T ss_dssp SEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSB
T ss_pred CCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCc
Confidence 4456666554311 11 1121 11223456899999987776542 2455545554220
Q ss_pred -------eeeeeecCCCCCeEEEEECCCCCEEEE
Q psy4391 187 -------CLKTLIDDDNPPVSFVKFSPNGKYILA 213 (231)
Q Consensus 187 -------~~~~~~~~~~~~i~~~~~s~~g~~l~~ 213 (231)
....+..... ....++|+|+|++.++
T Consensus 186 p~~nPf~~~~i~a~G~R-Np~Gla~dp~G~L~~~ 218 (347)
T 3das_A 186 APGNPFPGSPVYSYGHR-NVQGLAWDDKQRLFAS 218 (347)
T ss_dssp CTTCSSTTCCEEEBCCS-BCCEEEECTTCCEEEE
T ss_pred cCCCCCCCCeEEeeCCC-CcceEEECCCCCEEEE
Confidence 0111222222 2345899998876554
No 334
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.12 E-value=0.31 Score=37.21 Aligned_cols=106 Identities=15% Similarity=0.150 Sum_probs=62.0
Q ss_pred ccccceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEE--E----ecccccEEEEEECCC---CCEEEEe---cCCCc
Q psy4391 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT--I----SGHKLGISDVAWSSD---SRLLVSG---SDDKT 92 (231)
Q Consensus 25 ~h~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~--~----~~~~~~v~~~~~~~~---~~~l~~~---~~~g~ 92 (231)
.--..-..++|.|+|+++++-...|.|++++..++..... + .........++++|+ +..|+.. ..+..
T Consensus 29 ~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~ 108 (347)
T 3das_A 29 TGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNR 108 (347)
T ss_dssp CCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEE
T ss_pred cCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCE
Confidence 3345678999999999777754489999887655543221 1 123456889999995 3334332 23445
Q ss_pred EEEEeCCCc----------eee-eeecC-CCcceEEEEECCCCCEEEEee
Q psy4391 93 LKIWELSSG----------KCL-KTLKG-HSNYVFCCNFNPQSNLIVSGS 130 (231)
Q Consensus 93 i~~~d~~~~----------~~~-~~~~~-~~~~v~~~~~~~~~~~l~~~~ 130 (231)
|.-|....+ +.+ ..+.. .......+.|.|+|.+.++.+
T Consensus 109 v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 109 IVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp EEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECB
T ss_pred EEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEEC
Confidence 555555431 111 11211 111234588999998877754
No 335
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=96.03 E-value=0.41 Score=37.79 Aligned_cols=159 Identities=11% Similarity=0.198 Sum_probs=104.6
Q ss_pred ccceEEEEECCCCCEEEEEe-------CCCcEEEeecCCCcEEEEEecccccEEEEEECCC---CCEEEEecC---CCcE
Q psy4391 27 TKAVSSVKFSPNGEWLASSS-------ADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD---SRLLVSGSD---DKTL 93 (231)
Q Consensus 27 ~~~i~~~~~~~~~~~l~~~~-------~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~---~g~i 93 (231)
...|..-.-+++.+|++..+ ..|.+.+|..+ .+..+.+.+|......+...-+ ...++.+.+ .+.+
T Consensus 150 ~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~e-r~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kL 228 (494)
T 1bpo_A 150 GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVD-RKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKL 228 (494)
T ss_dssp TCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEEST-TCCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEE
T ss_pred cceEEEEEECCCCCeEEEEeecccCCcccceEEEeecc-ccccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEE
Confidence 35688888899999876432 24678899885 4455667777655444433211 123344433 2688
Q ss_pred EEEeCCCc---ee-----eeee----cCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeeccCCCCCeEEEEE
Q psy4391 94 KIWELSSG---KC-----LKTL----KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHF 161 (231)
Q Consensus 94 ~~~d~~~~---~~-----~~~~----~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~ 161 (231)
++-++... .. ...+ ....+...++..++....++.-+.-|.+++||++++.++..-+....+|...+.
T Consensus 229 hi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~ 308 (494)
T 1bpo_A 229 HIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAP 308 (494)
T ss_dssp EEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE
T ss_pred EEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeecccCCceEEecc
Confidence 88888532 10 1111 122456678889999999999999999999999999998877666677776666
Q ss_pred cCCCCeEEEEecCCeEEEEeCCCCc
Q psy4391 162 NRDGSLIVSSSYDGLCRIWDTASGQ 186 (231)
Q Consensus 162 ~~~~~~l~~~~~dg~i~v~d~~~~~ 186 (231)
+....=+++....|.|.-..+.+..
T Consensus 309 ~~~~~Gi~~Vnr~GqVl~v~v~e~~ 333 (494)
T 1bpo_A 309 HEATAGIIGVNRKGQVLSVCVEEEN 333 (494)
T ss_dssp ETTTTEEEEEETTCEEEEEEECTTT
T ss_pred cCCCCcEEEEccCceEEEEEEcccc
Confidence 6555556666677877666555443
No 336
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=96.01 E-value=0.23 Score=41.77 Aligned_cols=149 Identities=11% Similarity=0.092 Sum_probs=80.0
Q ss_pred CCCEEEEEeCCC------cEEEeecCCCcEEEEEe--cccccEEEEEECCCCCEEEEecCCC--cEEEEeCCCceeeeee
Q psy4391 38 NGEWLASSSADK------LIKIWGAYDGKFEKTIS--GHKLGISDVAWSSDSRLLVSGSDDK--TLKIWELSSGKCLKTL 107 (231)
Q Consensus 38 ~~~~l~~~~~dg------~i~i~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~g--~i~~~d~~~~~~~~~~ 107 (231)
+++.++.|+.++ .+.+||..+......-. ..... ..++...+++.++.|+.++ .+.+||..+......-
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~-h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~ 529 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFR-HSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVT 529 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBS-CEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECC
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCccc-ceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEcc
Confidence 666666766442 46778877665443211 11111 2233324677777877654 6899999876543221
Q ss_pred c-----CCCcceEEEEECCC-CCEEEEeec--C-----CcEEEEECCCCce-----eeecc----CCCCCeEEEEEcCCC
Q psy4391 108 K-----GHSNYVFCCNFNPQ-SNLIVSGSF--D-----ESVRIWDVRTGKC-----LKTLP----AHSDPVSAVHFNRDG 165 (231)
Q Consensus 108 ~-----~~~~~v~~~~~~~~-~~~l~~~~~--d-----~~i~v~d~~~~~~-----~~~~~----~~~~~v~~~~~~~~~ 165 (231)
. .......++.++.+ +.+++.|+. + ..+..||+.+... -..+. .......+ ....++
T Consensus 530 ~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~-~~~~~~ 608 (695)
T 2zwa_A 530 PKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQI-KYITPR 608 (695)
T ss_dssp CSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEE-EEEETT
T ss_pred CCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceE-EEeCCC
Confidence 1 11111122344544 667777765 2 3488999887761 11111 11111122 233336
Q ss_pred CeEEEEecC--------CeEEEEeCCCCcee
Q psy4391 166 SLIVSSSYD--------GLCRIWDTASGQCL 188 (231)
Q Consensus 166 ~~l~~~~~d--------g~i~v~d~~~~~~~ 188 (231)
++++.|+.+ ..+.+||+.+.+..
T Consensus 609 ~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~ 639 (695)
T 2zwa_A 609 KLLIVGGTSPSGLFDRTNSIISLDPLSETLT 639 (695)
T ss_dssp EEEEECCBCSSCCCCTTTSEEEEETTTTEEE
T ss_pred EEEEECCccCCCCCCCCCeEEEEECCCCeEE
Confidence 777777743 46899999887654
No 337
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.01 E-value=0.08 Score=40.31 Aligned_cols=112 Identities=8% Similarity=0.135 Sum_probs=69.3
Q ss_pred CEEEEecCCCcEEEEeCCCceeeeeecCCC-cceEEEEE--CC-CCCEEEEe-ecCCcEEEEECCCCceeeeccC----C
Q psy4391 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHS-NYVFCCNF--NP-QSNLIVSG-SFDESVRIWDVRTGKCLKTLPA----H 152 (231)
Q Consensus 82 ~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~-~~v~~~~~--~~-~~~~l~~~-~~d~~i~v~d~~~~~~~~~~~~----~ 152 (231)
..++.++.||.|.-+|.++|+..-.++... .++....- .+ ++..++.. ..||.|..++..+|.....+.. .
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 467888999999999999998877765431 12221110 01 22333333 6899999999888754333221 1
Q ss_pred CCCeEE---EEE-cC----CCCeEEEEecCCeEEEEeCCCCceeeeeec
Q psy4391 153 SDPVSA---VHF-NR----DGSLIVSSSYDGLCRIWDTASGQCLKTLID 193 (231)
Q Consensus 153 ~~~v~~---~~~-~~----~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~ 193 (231)
..++.. ..+ .+ .+..+++|+.+|.+...|+.+|+.+-++..
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~ 139 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGP 139 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEEST
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEec
Confidence 222221 001 00 356788999999999999999998766643
No 338
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=95.94 E-value=0.11 Score=39.52 Aligned_cols=140 Identities=10% Similarity=0.014 Sum_probs=64.2
Q ss_pred CcEEEeecCCCcEEEEEecccc-cE-EEEEECCCCCEEEEecC------CCcEEEEeC--CCceeee--eecCCCcceEE
Q psy4391 49 KLIKIWGAYDGKFEKTISGHKL-GI-SDVAWSSDSRLLVSGSD------DKTLKIWEL--SSGKCLK--TLKGHSNYVFC 116 (231)
Q Consensus 49 g~i~i~~~~~~~~~~~~~~~~~-~v-~~~~~~~~~~~l~~~~~------~g~i~~~d~--~~~~~~~--~~~~~~~~v~~ 116 (231)
..+.+||..+.+....-..... .. ..++. .+++.++.|+. ...+..||+ .+.+... .+.........
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~ 246 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVN-KGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGG 246 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEE-ETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSC
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEE-ECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccc
Confidence 4688888877765443221111 11 22222 24556666653 345777876 4433221 11111111111
Q ss_pred EEECCCCCEEEEeecC----------------------CcEEEEECCCCcee--eeccCCCCCeEEEEEcCCCCeEEEEe
Q psy4391 117 CNFNPQSNLIVSGSFD----------------------ESVRIWDVRTGKCL--KTLPAHSDPVSAVHFNRDGSLIVSSS 172 (231)
Q Consensus 117 ~~~~~~~~~l~~~~~d----------------------~~i~v~d~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~ 172 (231)
.....++.+++.|+.+ ..+.+||+.+.+.. ..+......-.++ ..++++++.|+
T Consensus 247 ~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~--~~~~~i~v~GG 324 (357)
T 2uvk_A 247 FAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSL--PWNNSLLIIGG 324 (357)
T ss_dssp EEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEEE--EETTEEEEEEE
T ss_pred eEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcccceeE--EeCCEEEEEee
Confidence 1122356677777632 24778998865432 2222211111222 23677777887
Q ss_pred cCC------eEEEEeCCCCceeeee
Q psy4391 173 YDG------LCRIWDTASGQCLKTL 191 (231)
Q Consensus 173 ~dg------~i~v~d~~~~~~~~~~ 191 (231)
.++ .+.++++++++.....
T Consensus 325 ~~~~~~~~~~v~~l~~~~~~~~~~~ 349 (357)
T 2uvk_A 325 ETAGGKAVTDSVLITVKDNKVTVQN 349 (357)
T ss_dssp ECGGGCEEEEEEEEEC-CCSCEEEC
T ss_pred eCCCCCEeeeEEEEEEcCcEeEeee
Confidence 653 4556688877765543
No 339
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=95.92 E-value=0.38 Score=36.49 Aligned_cols=190 Identities=13% Similarity=0.173 Sum_probs=108.2
Q ss_pred cceEEEEECCCCCEEEEEeCCCcEEEeecCCC-cEEEEEeccc----ccEEEEEECCCCCEEEEecC-------CCcEEE
Q psy4391 28 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDG-KFEKTISGHK----LGISDVAWSSDSRLLVSGSD-------DKTLKI 95 (231)
Q Consensus 28 ~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~-~~~~~~~~~~----~~v~~~~~~~~~~~l~~~~~-------~g~i~~ 95 (231)
..|.--.|-.+.. |+.-+ +..|+-|+++.. ...+.+..|. ..+....-+++.+.++..+- .|.+.+
T Consensus 107 e~VvfWkWis~~~-L~lVT-~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQL 184 (365)
T 2xzh_A 107 DDVTFWKWISLNT-VALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQL 184 (365)
T ss_dssp SCEEEEEECSSSE-EEEEE-SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEE
T ss_pred CccEEEEecCCCe-EEEEc-CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEE
Confidence 5666667754433 33222 457888887642 3444554432 34666677888887654332 367889
Q ss_pred EeCCCceeeeeecCCCcceEEEEECC--C-CCEEEEeec---CCcEEEEECCCC---ce------eeec-c--CCCCCeE
Q psy4391 96 WELSSGKCLKTLKGHSNYVFCCNFNP--Q-SNLIVSGSF---DESVRIWDVRTG---KC------LKTL-P--AHSDPVS 157 (231)
Q Consensus 96 ~d~~~~~~~~~~~~~~~~v~~~~~~~--~-~~~l~~~~~---d~~i~v~d~~~~---~~------~~~~-~--~~~~~v~ 157 (231)
|..+.+. .+.+.+|......+.... . .+++..+.. .+.+++.++... .. +..+ . +..+-..
T Consensus 185 YS~er~~-sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPV 263 (365)
T 2xzh_A 185 YSVDRKV-SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPV 263 (365)
T ss_dssp EETTTTE-EEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEE
T ss_pred Eeecccc-cceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceE
Confidence 9987543 456677765443332221 1 123333333 258999998433 11 1111 1 1234456
Q ss_pred EEEEcCCCCeEEEEecCCeEEEEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEE
Q psy4391 158 AVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLK 221 (231)
Q Consensus 158 ~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~ 221 (231)
++..++.-..++..+.-|.+++||++++.++..-.-... +|-..+-+.+..-+++....|+|.
T Consensus 264 amqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d-~iF~ta~~~~~~Gi~~Vnr~GqVl 326 (365)
T 2xzh_A 264 AMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGE-TIFVTAPHEATAGIIGVNRKGQVL 326 (365)
T ss_dssp EEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSS-CEEEEEEEGGGTEEEEEETTCEEE
T ss_pred EEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCC-ceEEecccCCCCcEEEEcCCCEEE
Confidence 788888888899999999999999999998776543333 232222333333444444566554
No 340
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=95.69 E-value=0.83 Score=38.71 Aligned_cols=187 Identities=15% Similarity=0.158 Sum_probs=104.8
Q ss_pred cceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEecCCCcEEEEeCCCceeeeee
Q psy4391 28 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTL 107 (231)
Q Consensus 28 ~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~ 107 (231)
..|.++.-..+|. |..|+.+| +..||..+.+...........|..+.. .++. |..++.+ -+..||..+++.....
T Consensus 63 ~~i~~i~~d~~g~-lWigT~~G-l~~yd~~~~~f~~~~~~~~~~i~~i~~-~~g~-lWigt~~-Gl~~~~~~~~~~~~~~ 137 (758)
T 3ott_A 63 TRIYCGVIIDNTY-LYMGTDNG-ILVYNYRADRYEQPETDFPTDVRTMAL-QGDT-LWLGALN-GLYTYQLQSRKLTSFD 137 (758)
T ss_dssp SCEEEEEEETTTE-EEEEETTE-EEEEETTTTEECCCSCCCCSCEEEEEE-ETTE-EEEEETT-EEEEEETTTCCEEEEC
T ss_pred ceEEEEEEcCCCc-EEEEeCCC-eEEEeCCCCEEECcccCCCceEEEEEe-cCCc-EEEEcCC-cceeEeCCCCeEEEec
Confidence 3577877776664 44455554 778887665432211111223555543 3554 4445555 5778888765433210
Q ss_pred c----CCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeee-ccC----CCCCeEEEEEcCCCCeEEEEecCCeEE
Q psy4391 108 K----GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKT-LPA----HSDPVSAVHFNRDGSLIVSSSYDGLCR 178 (231)
Q Consensus 108 ~----~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~-~~~----~~~~v~~~~~~~~~~~l~~~~~dg~i~ 178 (231)
. .....+.++....++.+.+ ++.+ -+..+|..+++.... ... ....|.++...+++..|..|+. +-+.
T Consensus 138 ~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~ 214 (758)
T 3ott_A 138 TRRNGLPNNTIYSIIRTKDNQIYV-GTYN-GLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLF 214 (758)
T ss_dssp HHHHCCSCSCEEEEEECTTCCEEE-EETT-EEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEE
T ss_pred cCCCCcCCCeEEEEEEcCCCCEEE-EeCC-CHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCe
Confidence 0 1234577777787887766 3443 477888776643211 111 1234788888777765555554 4577
Q ss_pred EEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeC
Q psy4391 179 IWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225 (231)
Q Consensus 179 v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~ 225 (231)
.+|..+++... +.......|.++..+.+|.+.+. +. +-+.+++.
T Consensus 215 ~~~~~~~~~~~-~~~l~~~~i~~i~~d~~g~lWig-T~-~Gl~~~~~ 258 (758)
T 3ott_A 215 QYFPSTGQIKQ-TEAFHNNSIKSLALDGNGDLLAG-TD-NGLYVYHN 258 (758)
T ss_dssp EEETTTTEEEE-EEEEEEEEEEEEEECTTCCEEEE-ET-TEEEEECC
T ss_pred EEcCCCCeEEe-ccCCCCCeEEEEEEcCCCCEEEE-eC-CceeEEec
Confidence 88887765322 21111234677888888876554 44 45667764
No 341
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=95.46 E-value=1.1 Score=40.99 Aligned_cols=192 Identities=12% Similarity=0.183 Sum_probs=110.0
Q ss_pred EEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEecCCCcEEEEeCCC-ceeeeeecCC-
Q psy4391 33 VKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSS-GKCLKTLKGH- 110 (231)
Q Consensus 33 ~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~~-~~~~~~~~~~- 110 (231)
...+|..+.||.- ...+++|+++++........-. .+|.-=.|-.+.. |+-.+ +..|+-|++.. ..+++.+..|
T Consensus 71 AIMnP~~~iiALr-ag~~lQiFnl~~k~klks~~~~-e~VvfWkWis~~~-l~lVT-~~aVyHW~~~~~s~P~k~fdR~~ 146 (1630)
T 1xi4_A 71 AIMNPASKVIALK-AGKTLQIFNIEMKSKMKAHTMT-DDVTFWKWISLNT-VALVT-DNAVYHWSMEGESQPVKMFDRHS 146 (1630)
T ss_pred hccCCCcceEEEe-cCCeEEEeehHHhhhhcccccC-CCceEEEecCCCe-eEEEc-CCeEEEeccCCCCccHHHHhcch
Confidence 4456666666654 3678999999876555544322 2454446654433 33332 45799999974 3444444433
Q ss_pred ---CcceEEEEECCCCCEEEEee-------cCCcEEEEECCCCceeeeccCCCCCeEEEEEc--CCC-CeEEEEe---cC
Q psy4391 111 ---SNYVFCCNFNPQSNLIVSGS-------FDESVRIWDVRTGKCLKTLPAHSDPVSAVHFN--RDG-SLIVSSS---YD 174 (231)
Q Consensus 111 ---~~~v~~~~~~~~~~~l~~~~-------~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~--~~~-~~l~~~~---~d 174 (231)
...|.....+++.++++..| -.|.+.+|..+.+. ...+.+|.+....+... +.. ..++.+. ..
T Consensus 147 ~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~-sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g 225 (1630)
T 1xi4_A 147 SLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAG 225 (1630)
T ss_pred hcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc-chhhhHhHhhhheeccCCCCCCceEEEEEEecCCC
Confidence 34566677788888776543 24678888877543 34455555443333322 111 2222222 23
Q ss_pred CeEEEEeCCCC---c-e-----eeeeecC---CCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCCC
Q psy4391 175 GLCRIWDTASG---Q-C-----LKTLIDD---DNPPVSFVKFSPNGKYILAATLDNTLKLWDSYPCLP 230 (231)
Q Consensus 175 g~i~v~d~~~~---~-~-----~~~~~~~---~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~~~~~~ 230 (231)
+.+++.++... . . ....... ...|| ++..++....+...+.-|.|.+||.....+
T Consensus 226 ~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv-~~~vs~k~g~iy~itk~G~~~~~d~~t~~~ 292 (1630)
T 1xi4_A 226 GKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPV-AMQISEKHDVVFLITKYGYIHLYDLETGTC 292 (1630)
T ss_pred ceEEEEecCCCccCCCCCccccccccCCcccccCcce-EEEeccccCEEEEEecCceEEEEecccchh
Confidence 68888887432 1 0 1111111 22344 477788888899999999999999765543
No 342
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=94.32 E-value=1.6 Score=39.91 Aligned_cols=157 Identities=11% Similarity=0.217 Sum_probs=92.6
Q ss_pred cceEEEEECCCCCEEEEEe-------CCCcEEEeecCCCcEEEEEecccccEEEEEEC---CCCCEEEEecC---CCcEE
Q psy4391 28 KAVSSVKFSPNGEWLASSS-------ADKLIKIWGAYDGKFEKTISGHKLGISDVAWS---SDSRLLVSGSD---DKTLK 94 (231)
Q Consensus 28 ~~i~~~~~~~~~~~l~~~~-------~dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~---~~~~~l~~~~~---~g~i~ 94 (231)
..|..-.-+++.+|++..+ ..|.+.+|..+. +..+.+.+|......+... +....++.+.. .+.++
T Consensus 151 ~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er-~~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLh 229 (1630)
T 1xi4_A 151 CQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLH 229 (1630)
T ss_pred CeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccc-ccchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEE
Confidence 4677888889999876432 347888888753 3344555655443333221 11223332222 36788
Q ss_pred EEeCCCc---ee-e--e--ee--c--CCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeeccCCCCCeEEEEEc
Q psy4391 95 IWELSSG---KC-L--K--TL--K--GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFN 162 (231)
Q Consensus 95 ~~d~~~~---~~-~--~--~~--~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~ 162 (231)
+-++... .. . + .+ . ...+...++..++....+...+.-|.+++||+.++.++..-+....+|...+.+
T Consensus 230 i~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~~iF~~~~~ 309 (1630)
T 1xi4_A 230 IIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPH 309 (1630)
T ss_pred EEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhhhhccccCCceEEeccC
Confidence 8887542 11 0 0 01 0 123445678888888899999999999999999998876655555555554444
Q ss_pred CCCCeEEEEecCCeEEEEeCCCC
Q psy4391 163 RDGSLIVSSSYDGLCRIWDTASG 185 (231)
Q Consensus 163 ~~~~~l~~~~~dg~i~v~d~~~~ 185 (231)
....-+++....|.|.-..+...
T Consensus 310 ~~~~g~~~vnr~G~vl~v~v~~~ 332 (1630)
T 1xi4_A 310 EATAGIIGVNRKGQVLSVCVEEE 332 (1630)
T ss_pred CCCCceEEEcCCceEEEEEEccc
Confidence 33333444456666655544433
No 343
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=93.46 E-value=0.29 Score=39.82 Aligned_cols=69 Identities=9% Similarity=0.156 Sum_probs=48.6
Q ss_pred EEEEECCCCCEEEEee-cCCcEEEEECCCCc------e-------eeeccCCCCCeEEEEEcCCCCeEEEEecCCeEEEE
Q psy4391 115 FCCNFNPQSNLIVSGS-FDESVRIWDVRTGK------C-------LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 180 (231)
Q Consensus 115 ~~~~~~~~~~~l~~~~-~d~~i~v~d~~~~~------~-------~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~ 180 (231)
..+..+|||++++.++ -+.++.++|.+.-. . ...... .-.....+|+++|.-..+---|.+|..|
T Consensus 326 HGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~-GlGPlHt~Fd~~G~aYTtlfidSqvvkW 404 (638)
T 3sbq_A 326 HGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPEL-GLGPLHTTFDGRGNAYTTLFIDSQVVKW 404 (638)
T ss_dssp CCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBC-CSCEEEEEECSSSEEEEEETTTTEEEEE
T ss_pred cceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccC-CCcccEEEECCCCceEeeeeecceEEEE
Confidence 3578899999988765 47889999987421 1 112222 2345788999999555556689999999
Q ss_pred eCCC
Q psy4391 181 DTAS 184 (231)
Q Consensus 181 d~~~ 184 (231)
++..
T Consensus 405 ni~~ 408 (638)
T 3sbq_A 405 NMEE 408 (638)
T ss_dssp EHHH
T ss_pred eccH
Confidence 9864
No 344
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=93.36 E-value=2.4 Score=33.59 Aligned_cols=190 Identities=13% Similarity=0.171 Sum_probs=109.7
Q ss_pred cceEEEEECCCCCEEEEEeCCCcEEEeecCCC-cEEEEEeccc----ccEEEEEECCCCCEEEEecC-------CCcEEE
Q psy4391 28 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDG-KFEKTISGHK----LGISDVAWSSDSRLLVSGSD-------DKTLKI 95 (231)
Q Consensus 28 ~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~-~~~~~~~~~~----~~v~~~~~~~~~~~l~~~~~-------~g~i~~ 95 (231)
..|.--.|-.+.. |+.-+ +..|+-|+++.. ...+.+..|. ..|....-+++.+.++..+- .|.+.+
T Consensus 106 e~VvfWkWis~~~-l~lVT-~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQL 183 (494)
T 1bpo_A 106 DDVTFWKWISLNT-VALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQL 183 (494)
T ss_dssp SCCCEEEEEETTE-EEEEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEE
T ss_pred CCceEEEecCCCe-EEEEc-CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEE
Confidence 4455556643333 33222 567888888642 3445554432 34666677888887654332 367889
Q ss_pred EeCCCceeeeeecCCCcceEEEEECCC---CCEEEEeec---CCcEEEEECCCC---ce------eeec-c--CCCCCeE
Q psy4391 96 WELSSGKCLKTLKGHSNYVFCCNFNPQ---SNLIVSGSF---DESVRIWDVRTG---KC------LKTL-P--AHSDPVS 157 (231)
Q Consensus 96 ~d~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~---d~~i~v~d~~~~---~~------~~~~-~--~~~~~v~ 157 (231)
|..+.+. .+.+.+|......+....+ .+++..+.. .+.+++.++... .. +..+ . ...+-..
T Consensus 184 YS~er~~-sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPv 262 (494)
T 1bpo_A 184 YSVDRKV-SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPV 262 (494)
T ss_dssp EESTTCC-EEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEE
T ss_pred eeccccc-cchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCcee
Confidence 9987543 4567777665544433221 123443433 378999998543 11 0111 1 1234456
Q ss_pred EEEEcCCCCeEEEEecCCeEEEEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEE
Q psy4391 158 AVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLK 221 (231)
Q Consensus 158 ~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~ 221 (231)
++..++.-..++..+.-|.+++||+.++.++..-.-... +|-..+-+.+..-+++....|.|.
T Consensus 263 amqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~-~iF~t~~~~~~~Gi~~Vnr~GqVl 325 (494)
T 1bpo_A 263 AMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGE-TIFVTAPHEATAGIIGVNRKGQVL 325 (494)
T ss_dssp EEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSS-CEEEEEEETTTTEEEEEETTCEEE
T ss_pred EEEecccCCEEEEEecCceEEEEecccceeeeeecccCC-ceEEecccCCCCcEEEEccCceEE
Confidence 788998888899999999999999999998776543332 232223333334444445666554
No 345
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=91.90 E-value=6.8 Score=35.21 Aligned_cols=128 Identities=12% Similarity=0.110 Sum_probs=73.2
Q ss_pred EEEEeCCCceeeeeecCCC-cceEEEEECCCCCEEEEeecCCcEEEEECCCCcee--eeccCCCCCeEEEEEcCC-----
Q psy4391 93 LKIWELSSGKCLKTLKGHS-NYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCL--KTLPAHSDPVSAVHFNRD----- 164 (231)
Q Consensus 93 i~~~d~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~--~~~~~~~~~v~~~~~~~~----- 164 (231)
|++.+......+..+.... ..|..++.+. ..++.+. ++.+.++++..++.. ... .....|.|+++.|.
T Consensus 494 Irli~~~~~~~~~~w~~p~~~~I~~As~n~--~~vvva~-g~~l~~fel~~~~L~~~~~~-~l~~evscl~i~~~~~~~~ 569 (1158)
T 3ei3_A 494 VRLVSQEPKALVSEWKEPQAKNISVASCNS--SQVVVAV-GRALYYLQIHPQELRQISHT-EMEHEVACLDITPLGDSNG 569 (1158)
T ss_dssp EEEEESSSCCEEEEECCTTCCCCCEEEECS--SEEEEEE-TTEEEEEEEETTEEEEEEEE-ECSSCEEEEECCCCSSSTT
T ss_pred EEEEECCCCeEEEEEECCCCCEEEEEEeCC--CEEEEEE-CCEEEEEEeeCCceeeeccc-CCCCceEEEEeecCCCCcc
Confidence 4455544333444444222 2344444443 3455554 577888877655321 121 22457999998763
Q ss_pred -CCeEEEEec-CCeEEEEeCCCCceeeeeecCCCCCeEEEEEC--CCCCEEEEEeCCCeEEEEe
Q psy4391 165 -GSLIVSSSY-DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS--PNGKYILAATLDNTLKLWD 224 (231)
Q Consensus 165 -~~~l~~~~~-dg~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s--~~g~~l~~~s~d~~v~vwd 224 (231)
++++++|.. |++++++++.+.+.+............++.+. ....+|.+|-.||.+..+.
T Consensus 570 ~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~ 633 (1158)
T 3ei3_A 570 LSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFG 633 (1158)
T ss_dssp CCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEE
T ss_pred cccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEE
Confidence 368899987 99999999987665433222222222333221 2346888888999876554
No 346
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=90.07 E-value=2.2 Score=34.95 Aligned_cols=66 Identities=11% Similarity=0.160 Sum_probs=43.7
Q ss_pred EEEEcCCCCeEEEEe-cCCeEEEEeCCCCce-------------eeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEE
Q psy4391 158 AVHFNRDGSLIVSSS-YDGLCRIWDTASGQC-------------LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 223 (231)
Q Consensus 158 ~~~~~~~~~~l~~~~-~dg~i~v~d~~~~~~-------------~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vw 223 (231)
.+..+|||+++++++ .+.++.++|.+.... ..+.. -+..-...+|+++|.-..+--.|.+|.-|
T Consensus 327 Gv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e--~GlGPlHt~Fd~~G~aYTtlfidSqvvkW 404 (638)
T 3sbq_A 327 GCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE--LGLGPLHTTFDGRGNAYTTLFIDSQVVKW 404 (638)
T ss_dssp CEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB--CCSCEEEEEECSSSEEEEEETTTTEEEEE
T ss_pred ceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc--CCCcccEEEECCCCceEeeeeecceEEEE
Confidence 467899999988766 467999999874211 11111 12223568999999433444479999999
Q ss_pred eC
Q psy4391 224 DS 225 (231)
Q Consensus 224 d~ 225 (231)
+.
T Consensus 405 ni 406 (638)
T 3sbq_A 405 NM 406 (638)
T ss_dssp EH
T ss_pred ec
Confidence 85
No 347
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=89.78 E-value=6.5 Score=31.31 Aligned_cols=105 Identities=15% Similarity=0.113 Sum_probs=59.8
Q ss_pred cccEEEEEECCCCC-EEEEecCCCcEEEEeCCCce---eeeeec----C-----CCcceEEEEECCC----CCEEEEeec
Q psy4391 69 KLGISDVAWSSDSR-LLVSGSDDKTLKIWELSSGK---CLKTLK----G-----HSNYVFCCNFNPQ----SNLIVSGSF 131 (231)
Q Consensus 69 ~~~v~~~~~~~~~~-~l~~~~~~g~i~~~d~~~~~---~~~~~~----~-----~~~~v~~~~~~~~----~~~l~~~~~ 131 (231)
-.....|+|.|++. .++++...|.|++++..... .+..+. . .......++++|+ +.+.++-+.
T Consensus 13 L~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~ 92 (463)
T 2wg3_C 13 LRQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTT 92 (463)
T ss_dssp ESSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEE
T ss_pred CCCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeC
Confidence 34567899999986 46666788999999754321 122221 0 1245678999996 333333222
Q ss_pred --C----------CcEEEEECCCC----------ceeeecc--CCCCCeEEEEEcCCCCeEEEEec
Q psy4391 132 --D----------ESVRIWDVRTG----------KCLKTLP--AHSDPVSAVHFNRDGSLIVSSSY 173 (231)
Q Consensus 132 --d----------~~i~v~d~~~~----------~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~ 173 (231)
+ ..|.-|.+..+ +.+..+. ........|+|.|||.++++.+.
T Consensus 93 ~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 93 NQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp CCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECC
T ss_pred CCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCC
Confidence 1 13444554321 1222221 12335678999999987776554
No 348
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=89.61 E-value=2.6 Score=34.70 Aligned_cols=60 Identities=20% Similarity=0.301 Sum_probs=44.0
Q ss_pred eEEEEEcCCCCeEEEEecC------------CeEEEEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEe
Q psy4391 156 VSAVHFNRDGSLIVSSSYD------------GLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT 215 (231)
Q Consensus 156 v~~~~~~~~~~~l~~~~~d------------g~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s 215 (231)
.-.|.|+|.|.++++-..+ ..+.+.+..+++..+-+.......++.++|+||++.|++.-
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvni 549 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEEE
Confidence 4679999999966654321 24666777777765555556677889999999999887764
No 349
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=89.39 E-value=7 Score=31.13 Aligned_cols=105 Identities=10% Similarity=0.038 Sum_probs=57.4
Q ss_pred cceEEEEECCCCC-EEEEeecCCcEEEEECCCCc---eeeecc---C------CCCCeEEEEEcCC----CCeEEEEec-
Q psy4391 112 NYVFCCNFNPQSN-LIVSGSFDESVRIWDVRTGK---CLKTLP---A------HSDPVSAVHFNRD----GSLIVSSSY- 173 (231)
Q Consensus 112 ~~v~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~---~~~~~~---~------~~~~v~~~~~~~~----~~~l~~~~~- 173 (231)
.....+++.|++. .++.+...|.|++++..... .+..+. . .......|+++|+ +.++++-+.
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 3456889999986 45556778999999754321 111111 1 1356788999996 333333222
Q ss_pred -C----------CeEEEEeCCC----------Cceeeeee-cCCCCCeEEEEECCCCCEEEEEeC
Q psy4391 174 -D----------GLCRIWDTAS----------GQCLKTLI-DDDNPPVSFVKFSPNGKYILAATL 216 (231)
Q Consensus 174 -d----------g~i~v~d~~~----------~~~~~~~~-~~~~~~i~~~~~s~~g~~l~~~s~ 216 (231)
+ ..|.-|.+.. .+.+..+. .........|+|.|||.+.++.+.
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECC
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCC
Confidence 1 1343354432 11222222 112233567999999976666553
No 350
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=88.98 E-value=9.7 Score=32.22 Aligned_cols=185 Identities=13% Similarity=0.079 Sum_probs=101.1
Q ss_pred ceEEEEECCCCCEEEEEeCCCcEEEeecCCCcEEEEEe----cccccEEEEEECCCCCEEEEecCCCcEEEEeCCCceee
Q psy4391 29 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS----GHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCL 104 (231)
Q Consensus 29 ~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~ 104 (231)
.|.++.. .+| .|..++.+ .+..++..+.+...... .....|.++....++...+. ..+ -+..++..+++..
T Consensus 104 ~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWig-t~~-Gl~~~~~~~~~~~ 178 (758)
T 3ott_A 104 DVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQIYVG-TYN-GLCRYIPSNGKFE 178 (758)
T ss_dssp CEEEEEE-ETT-EEEEEETT-EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTCCEEEE-ETT-EEEEEETTTTEEE
T ss_pred eEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCCCEEEE-eCC-CHhhCccCCCceE
Confidence 3555543 344 34445555 57778876554432211 01235777877777776554 344 4677887765532
Q ss_pred ee-ecC----CCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeEEEEecCCeEEE
Q psy4391 105 KT-LKG----HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 179 (231)
Q Consensus 105 ~~-~~~----~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v 179 (231)
.. ... ....+.++...+++..|-.|+. +-+..+|..+++...........|.++....+|.+.+ |+. +-+.+
T Consensus 179 ~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gT~-~Gl~~ 255 (758)
T 3ott_A 179 GIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLA-GTD-NGLYV 255 (758)
T ss_dssp EECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEE-EET-TEEEE
T ss_pred EecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEE-EeC-CceeE
Confidence 21 111 1224777777777665545554 4588889876653221111123577888777777555 444 45778
Q ss_pred EeCCCCceeeeeec------CCCCCeEEEEECCCCCEEEEEeCCCeEEEE
Q psy4391 180 WDTASGQCLKTLID------DDNPPVSFVKFSPNGKYILAATLDNTLKLW 223 (231)
Q Consensus 180 ~d~~~~~~~~~~~~------~~~~~i~~~~~s~~g~~l~~~s~d~~v~vw 223 (231)
++..+++....... .....|.++..+.+|.+.+ |+..| +.++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWi-GT~~G-l~~~ 303 (758)
T 3ott_A 256 YHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHNIWL-GTDYG-ISLS 303 (758)
T ss_dssp ECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCCEEE-EESSS-EEEE
T ss_pred EecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCCEEE-EeCCc-cccc
Confidence 88876543221111 1123478888888887554 44455 4443
No 351
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=88.40 E-value=4.7 Score=35.35 Aligned_cols=37 Identities=22% Similarity=0.365 Sum_probs=31.7
Q ss_pred CeEEEEEcCCCCeEEEEecCCeEEEEeCCCCceeeee
Q psy4391 155 PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 191 (231)
Q Consensus 155 ~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~ 191 (231)
.+.+++..++..++++-+.|+.+++|++.+++++.+.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 4667777888889999999999999999999887654
No 352
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=88.30 E-value=5.2 Score=32.80 Aligned_cols=61 Identities=18% Similarity=0.285 Sum_probs=42.1
Q ss_pred CeEEEEEcCCCCeEEEEec------------CCeEEEEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEe
Q psy4391 155 PVSAVHFNRDGSLIVSSSY------------DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT 215 (231)
Q Consensus 155 ~v~~~~~~~~~~~l~~~~~------------dg~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s 215 (231)
....|.|+++|.+.++... ...+..++..+++....+.......++.++|+||++.|+++-
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 4567999999987773321 125777787777754443333445678999999999887765
No 353
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=87.83 E-value=7.3 Score=29.41 Aligned_cols=154 Identities=10% Similarity=0.031 Sum_probs=84.8
Q ss_pred cceEEE-EECC--CCCEEEEEeCCCcEEEeecCCCcE-----EE--EEecccccEEEEEECCCCCEEEEecCCCcEEEEe
Q psy4391 28 KAVSSV-KFSP--NGEWLASSSADKLIKIWGAYDGKF-----EK--TISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWE 97 (231)
Q Consensus 28 ~~i~~~-~~~~--~~~~l~~~~~dg~i~i~~~~~~~~-----~~--~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d 97 (231)
..|.++ .... +...++.++.+|.++.-...+... .. .+.. ...+..+........|+..+..|.+..+.
T Consensus 95 e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~rf~ 173 (327)
T 3uc1_A 95 ERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSIRFS 173 (327)
T ss_dssp CCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEE
T ss_pred CEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEEEEE
Confidence 345544 4432 567888999999998876533211 11 1222 23344444444556677777888877776
Q ss_pred CC--Cc---------eeeeeecCCCcceEEEEECCCCCEEEEeecCCcEEEEECCC-------Cceeeecc--CCCCCeE
Q psy4391 98 LS--SG---------KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT-------GKCLKTLP--AHSDPVS 157 (231)
Q Consensus 98 ~~--~~---------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~-------~~~~~~~~--~~~~~v~ 157 (231)
.. .- .....+. ..+.+.++...+++..++..+..|.++.-.+.. ++-+..+. ...+.+.
T Consensus 174 ~~~~eip~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~lv 252 (327)
T 3uc1_A 174 ATDEALRPMGRATSGVQGMRFN-IDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLV 252 (327)
T ss_dssp CCTTTSCCCCTTSBCEESSCCC-TTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCSEE
T ss_pred CcccccCcCCcCCCCeeeecCC-CCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCeEE
Confidence 65 21 1111222 234566666656667888999999988876532 12222222 2123344
Q ss_pred EEEEcCCCCeEEEEecCCeEEEEeCC
Q psy4391 158 AVHFNRDGSLIVSSSYDGLCRIWDTA 183 (231)
Q Consensus 158 ~~~~~~~~~~l~~~~~dg~i~v~d~~ 183 (231)
.+....+...++..+.+|.+.-++..
T Consensus 253 ~~~~~~~~~~i~l~T~~G~~ir~~~~ 278 (327)
T 3uc1_A 253 GALIVDDDSELYAVTSGGGVIRTAAR 278 (327)
T ss_dssp EEEEECTTCEEEEEEGGGCEEEEEGG
T ss_pred EEEEeCCCccEEEEcCCCeEEEEehh
Confidence 44433344556666777776666543
No 354
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=85.98 E-value=19 Score=32.41 Aligned_cols=187 Identities=12% Similarity=0.027 Sum_probs=92.3
Q ss_pred ccceEEEEECCC------CCEEEEEeC-CCcEEEeecCCCcEEEEEec-ccccEEEEEEC--CCCCEEEEecCCCcEEEE
Q psy4391 27 TKAVSSVKFSPN------GEWLASSSA-DKLIKIWGAYDGKFEKTISG-HKLGISDVAWS--SDSRLLVSGSDDKTLKIW 96 (231)
Q Consensus 27 ~~~i~~~~~~~~------~~~l~~~~~-dg~i~i~~~~~~~~~~~~~~-~~~~v~~~~~~--~~~~~l~~~~~~g~i~~~ 96 (231)
...|.|+++.|. +++++.|.. |++++|+++.+........- ......++.+. ....++..|-.||.+.-+
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~ 632 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYF 632 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEE
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEE
Confidence 457999999863 368888886 99999999976554433221 11223333332 233567888889987655
Q ss_pred eCC--Cceee--eeecCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeeccCCCCCe-EEEEEcCC--CCeEE
Q psy4391 97 ELS--SGKCL--KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPV-SAVHFNRD--GSLIV 169 (231)
Q Consensus 97 d~~--~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v-~~~~~~~~--~~~l~ 169 (231)
.++ +++.. +...-...++.-..+...+..-+.+..+....++--+..-....+. ...+ ....|+.. ..-++
T Consensus 633 ~~d~~tg~l~d~r~~~LG~~pv~L~~~~~~~~~~V~a~s~rp~liy~~~~~l~~s~l~--~~~v~~~~~F~se~~~~g~v 710 (1158)
T 3ei3_A 633 GLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVN--LKEVNYMCPLNSDGYPDSLA 710 (1158)
T ss_dssp EECTTTCCEEEEEEEECCSSCCEEEEEESSSCEEEEEESSSCEEEEESSSSEEEEEBS--SSCCCEEEEECCSSSTTEEE
T ss_pred EEcCCCCccccceeEEcCCCceEEEEEeeCCceeEEEECCCCEEEEEcCCceEEeccC--hHHhceEeccCcccCCCcEE
Confidence 443 43321 1111112233222233333333333334444444433221111121 1223 22344321 23344
Q ss_pred EEecCCeEEEEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEeC
Q psy4391 170 SSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATL 216 (231)
Q Consensus 170 ~~~~dg~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~ 216 (231)
..+ ++.+++..+...+.+....-.-......++++|+.+.++.+..
T Consensus 711 ~~~-~~~LrI~~i~~~~~~~~~~ipL~~Tprri~y~~~~~~~~v~~~ 756 (1158)
T 3ei3_A 711 LAN-NSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSS 756 (1158)
T ss_dssp EEC-SSCEEEEEECCSSSEEEEEEECSSEEEEEEEEGGGTEEEEEEE
T ss_pred EEc-CCceEEEEecccCCeeEEEEeCCCCceEEEEcCCCCEEEEEEE
Confidence 333 4558887665433222221122335677889998887666553
No 355
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=81.46 E-value=15 Score=27.50 Aligned_cols=187 Identities=10% Similarity=0.066 Sum_probs=99.9
Q ss_pred CCCCEEEEEeCCCcEEEeecCCCcE-------EEEEe-cccccEEEEEECCCCCEEEEecCCCcEEEEeCC---Cc----
Q psy4391 37 PNGEWLASSSADKLIKIWGAYDGKF-------EKTIS-GHKLGISDVAWSSDSRLLVSGSDDKTLKIWELS---SG---- 101 (231)
Q Consensus 37 ~~~~~l~~~~~dg~i~i~~~~~~~~-------~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~---~~---- 101 (231)
++...++..+.+|.|+--...+... ...+. .....+..+........++..+..|.++-.... ..
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~ 85 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRAS 85 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC-----
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCCCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCccC
Confidence 4566777888899888765432211 11111 112234444444445567777777876655442 11
Q ss_pred --ee---eeeecCCCcceEEEEECC---CCCEEEEeecCCcEEEEECCC-------CceeeeccCCCCCeEEEEEcCCCC
Q psy4391 102 --KC---LKTLKGHSNYVFCCNFNP---QSNLIVSGSFDESVRIWDVRT-------GKCLKTLPAHSDPVSAVHFNRDGS 166 (231)
Q Consensus 102 --~~---~~~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~i~v~d~~~-------~~~~~~~~~~~~~v~~~~~~~~~~ 166 (231)
.+ ...+.. .+.+..+..-+ +...++..+..|.++-..+.. |.....+.. .+.+..+.......
T Consensus 86 ~G~~i~~~l~l~~-~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~~ 163 (312)
T 1suu_A 86 KGQNISELINLGD-QEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFKDE 163 (312)
T ss_dssp --CBGGGTSCCCT-TCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECTTC
T ss_pred CCcChhhccCCCC-CCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCCCC
Confidence 11 111222 23344433222 456788889999998877632 222223333 34555555444456
Q ss_pred eEEEEecCCeEEEEeCCCCc-------eeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeC
Q psy4391 167 LIVSSSYDGLCRIWDTASGQ-------CLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225 (231)
Q Consensus 167 ~l~~~~~dg~i~v~d~~~~~-------~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~ 225 (231)
.++..+.+|.+..+....-. -+..+.......+..+..-+++..+++.+..|..+....
T Consensus 164 ~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~ 229 (312)
T 1suu_A 164 KVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFVKVLSVKENPYLLIVSENGYGKRLNM 229 (312)
T ss_dssp EEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCTTCCEEEEEECTTCSEEEEEETTSEEEEEEG
T ss_pred EEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCCCCEEEEEEEECCCCeEEEEECCCceEEEEH
Confidence 78888889988888654311 111111122334555554455667888888998888775
No 356
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=80.97 E-value=14 Score=27.04 Aligned_cols=126 Identities=16% Similarity=0.079 Sum_probs=58.2
Q ss_pred CCcEEEEeCCC-ceeeeeecCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeE
Q psy4391 90 DKTLKIWELSS-GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLI 168 (231)
Q Consensus 90 ~g~i~~~d~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 168 (231)
+|.|+.|-... ++.-... .....+..++.......++ . +|.++.|-......+..-......|..++--.+ ..+
T Consensus 119 ~G~v~~wG~n~~gqlg~~~-~~~~~i~~i~~G~~~~~~l--~-~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~-hs~ 193 (282)
T 3qhy_B 119 DGKVIAWGDDSDGQTTVPA-EAQSGVTALDGGVYTALAV--K-NGGVIAWGDNYFGQTTVPAEAQSGVDDVAGGIF-HSL 193 (282)
T ss_dssp TTEEEEEECCTTSTTSCCG-GGGSSEEEEEECSSEEEEE--E-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSS-EEE
T ss_pred CCeEEEecCCCCCcCCCCc-cCCCCeEEEEcccCEEEEE--E-CCEEEEecCCCCCCCCCceecCCCeEEEEecCC-EEE
Confidence 77888886543 2211111 1123455555544332222 3 688888865432111100011235666654332 223
Q ss_pred EEEecCCeEEEEeCCCCceeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCC
Q psy4391 169 VSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSY 226 (231)
Q Consensus 169 ~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~~ 226 (231)
+. .||.+..|-......+.. .......|..++..... .++-+ ||.|..|-..
T Consensus 194 al--~~G~v~~wG~n~~gqlg~-p~~~~~~v~~i~~G~~h--~~al~-~g~v~~wG~n 245 (282)
T 3qhy_B 194 AL--KDGKVIAWGDNRYKQTTV-PTEALSGVSAIASGEWY--SLALK-NGKVIAWGSS 245 (282)
T ss_dssp EE--ETTEEEEEECCTTSTTCC-CGGGGSSCCEEEECSSC--EEEEE-TTEEEEESTT
T ss_pred EE--ECCeEEEEECCCCCCCCC-CcccCCCceEEEcCCCE--EEEEE-CCEEEEecCC
Confidence 33 589999995433221111 11112245556554433 23333 8888888753
No 357
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=79.61 E-value=32 Score=30.27 Aligned_cols=37 Identities=24% Similarity=0.459 Sum_probs=31.0
Q ss_pred ceEEEEECCCCCEEEEeecCCcEEEEECCCCceeeec
Q psy4391 113 YVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTL 149 (231)
Q Consensus 113 ~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~ 149 (231)
.+.++...++..++++-+.|+++|+|++.+++++...
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 4566677778889999999999999999999877653
No 358
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=78.41 E-value=20 Score=27.38 Aligned_cols=141 Identities=9% Similarity=-0.039 Sum_probs=64.6
Q ss_pred cEEEEEECCC--CCEEEEecCCCcEEEEeCCC--ceeeeeec----------------CCCcceEEEEECCC-CCEEEEe
Q psy4391 71 GISDVAWSSD--SRLLVSGSDDKTLKIWELSS--GKCLKTLK----------------GHSNYVFCCNFNPQ-SNLIVSG 129 (231)
Q Consensus 71 ~v~~~~~~~~--~~~l~~~~~~g~i~~~d~~~--~~~~~~~~----------------~~~~~v~~~~~~~~-~~~l~~~ 129 (231)
.+..+++.|. ...+.++...+.|...+-.. .+.+.... .....+.++.++|. ...+..+
T Consensus 116 ~i~~l~~~~~~~~~~l~~g~~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg 195 (394)
T 3b7f_A 116 HVFWLTPGHASEPGTWYAGTSPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIG 195 (394)
T ss_dssp EEEEEEECCTTSTTCEEEEEETTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEE
T ss_pred ceeEEEeCCCCCCCEEEEEecCCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEE
Confidence 4677888862 45565555555554433211 12211110 01234678888873 3445555
Q ss_pred ecCCcEEEEECCCCceeeeccCC-------------CCCeEEEEEcCC-CCeEEEEecCCeEEEEeCCCCceeeeeec-C
Q psy4391 130 SFDESVRIWDVRTGKCLKTLPAH-------------SDPVSAVHFNRD-GSLIVSSSYDGLCRIWDTASGQCLKTLID-D 194 (231)
Q Consensus 130 ~~d~~i~v~d~~~~~~~~~~~~~-------------~~~v~~~~~~~~-~~~l~~~~~dg~i~v~d~~~~~~~~~~~~-~ 194 (231)
..++.|...+ ..++.-..+... ...+.++.++|+ ...++++...+ |...+- .++....+.. .
T Consensus 196 ~~~ggl~~s~-DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l~~s~D-~G~tW~~~~~~l 272 (394)
T 3b7f_A 196 MSSGGVFEST-DAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-IYRMDR-REGVWKRIGDAM 272 (394)
T ss_dssp EETBEEEEES-STTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-EEEEET-TTTEEECGGGGS
T ss_pred ECCCCEEEEC-CCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-EEEeCC-CCCcceECCCCC
Confidence 4444444332 222222211100 124788999986 35666666544 444332 2333332221 1
Q ss_pred CC---CCeEEEEECCC-CCEEEEE
Q psy4391 195 DN---PPVSFVKFSPN-GKYILAA 214 (231)
Q Consensus 195 ~~---~~i~~~~~s~~-g~~l~~~ 214 (231)
.. ..+..++++|. ...|.++
T Consensus 273 ~~~~~~~~~~i~~~p~~~~~l~~~ 296 (394)
T 3b7f_A 273 PREVGDIGFPIVVHQRDPRTVWVF 296 (394)
T ss_dssp CTTTCSCEEEEEECSSCTTCEEEE
T ss_pred CCCCccceEEEEECCCCCCEEEEE
Confidence 11 22456777763 3344444
No 359
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=78.19 E-value=21 Score=27.34 Aligned_cols=174 Identities=9% Similarity=-0.004 Sum_probs=81.6
Q ss_pred EEEEEeCCCcEEEeecCC--CcEEEE-EecccccEEEEEECC-CCCEEEEecCCC----cEEEEeCCCceeeeeec----
Q psy4391 41 WLASSSADKLIKIWGAYD--GKFEKT-ISGHKLGISDVAWSS-DSRLLVSGSDDK----TLKIWELSSGKCLKTLK---- 108 (231)
Q Consensus 41 ~l~~~~~dg~i~i~~~~~--~~~~~~-~~~~~~~v~~~~~~~-~~~~l~~~~~~g----~i~~~d~~~~~~~~~~~---- 108 (231)
.|.+|+..| +.+++... ...... .......+.++++.| +...+.++...| .|...+ +.++.-..+.
T Consensus 24 ~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~-D~G~tW~~~~~~~~ 101 (394)
T 3b7f_A 24 MLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRSD-DGGGNWTEATRPPA 101 (394)
T ss_dssp EEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEES-STTSCCEECSBCCC
T ss_pred EEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCCCCCccEEEeC-CCCCCceECCcccc
Confidence 566777776 55554432 222221 112235689999998 233344444444 343332 2222111111
Q ss_pred --C--------CCcceEEEEECCC--CCEEEEeecCCcEEEEECCCCceeeecc-------------------CCCCCeE
Q psy4391 109 --G--------HSNYVFCCNFNPQ--SNLIVSGSFDESVRIWDVRTGKCLKTLP-------------------AHSDPVS 157 (231)
Q Consensus 109 --~--------~~~~v~~~~~~~~--~~~l~~~~~d~~i~v~d~~~~~~~~~~~-------------------~~~~~v~ 157 (231)
. ....+.++.++|. ...+..+...+.|...+- .++.-..+. .....+.
T Consensus 102 ~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~D-gG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~ 180 (394)
T 3b7f_A 102 FNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRSTD-HGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMH 180 (394)
T ss_dssp CCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEESS-TTSBCEECHHHHTCTTHHHHHCCC----CCCCEEE
T ss_pred CCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEcC-CCCCeEECcCccCCccccccccccccCCCCCCcee
Confidence 0 1124667888862 455555655565554432 222211111 1123577
Q ss_pred EEEEcCC-CCeEEEEecCCeEEEEeCCCCceeeeeecC-C-----------CCCeEEEEECCC-CCEEEEEeCCC
Q psy4391 158 AVHFNRD-GSLIVSSSYDGLCRIWDTASGQCLKTLIDD-D-----------NPPVSFVKFSPN-GKYILAATLDN 218 (231)
Q Consensus 158 ~~~~~~~-~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~-~-----------~~~i~~~~~s~~-g~~l~~~s~d~ 218 (231)
++.++|. ...++.+..++.+...+ ..++....+... . ...+..++++|+ ...|++++..+
T Consensus 181 ~i~~d~~~~~~l~vg~~~ggl~~s~-DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g 254 (394)
T 3b7f_A 181 SILVDPRDPKHLYIGMSSGGVFEST-DAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG 254 (394)
T ss_dssp EEEECTTCTTCEEEEEETBEEEEES-STTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE
T ss_pred EEEECCCCCCEEEEEECCCCEEEEC-CCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe
Confidence 8999883 44555555455444432 223322222110 0 123778888886 35566666444
No 360
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=77.73 E-value=12 Score=33.58 Aligned_cols=35 Identities=26% Similarity=0.473 Sum_probs=28.3
Q ss_pred EEEEECCCCCEEEEeecCCcEEEEECCCCceeeec
Q psy4391 115 FCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTL 149 (231)
Q Consensus 115 ~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~ 149 (231)
.++...++..++++-+.|+++|+|++.+++++...
T Consensus 241 vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 241 ISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp SCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred EEeeccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 34455567789999999999999999999876653
No 361
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=75.82 E-value=21 Score=26.13 Aligned_cols=164 Identities=12% Similarity=0.049 Sum_probs=75.1
Q ss_pred CCcEEEeecCCCcEEEEEecccccEEEEEECCCCCEEEEecCCCcEEEEeCCCc-eeeeeecCCCcceEEEEECCCCCEE
Q psy4391 48 DKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSG-KCLKTLKGHSNYVFCCNFNPQSNLI 126 (231)
Q Consensus 48 dg~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l 126 (231)
||.+..|-.........-......|..++-.... .+... +|.|+.|-.... +.-.... ....+..++........
T Consensus 41 ~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~h--s~~l~-~G~v~~wG~n~~Gqlg~P~~-~~~~v~~ia~G~~hs~a 116 (282)
T 3qhy_B 41 GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYH--SLALK-DGEVIAWGGNEDGQTTVPAE-ARSGVDAIAAGAWASYA 116 (282)
T ss_dssp TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSSE--EEEEE-TTEEEEEECCTTSTTCCCGG-GSSSEEEEEEETTEEEE
T ss_pred CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCE--EEEEE-CCEEEEeeCCCCCCCCCCcc-cCCCeEEEECcCCEEEE
Confidence 7777777643211100000112245555544332 22223 788888865432 1110011 12346666555443333
Q ss_pred EEeecCCcEEEEECCCCceeeeccCCCCCeEEEEEcCCCCeEEEEecCCeEEEEeCCCCceeeeeecCCCCCeEEEEECC
Q psy4391 127 VSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP 206 (231)
Q Consensus 127 ~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~ 206 (231)
-. +|.|+.|-......+..-......|..++.-.+ ..+.-. ||.+..|-......+.. .......+..++...
T Consensus 117 --l~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~--~~~~l~-~G~v~~wG~n~~gqlg~-p~~~~~~v~~i~~G~ 189 (282)
T 3qhy_B 117 --LK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVY--TALAVK-NGGVIAWGDNYFGQTTV-PAEAQSGVDDVAGGI 189 (282)
T ss_dssp --EE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSS--EEEEEE-TTEEEEEECCTTSTTSC-CGGGGSSEEEEEECS
T ss_pred --Ee-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccC--EEEEEE-CCEEEEecCCCCCCCCC-ceecCCCeEEEEecC
Confidence 34 889999975432111111111234665554332 222233 78888885543221211 111123566666554
Q ss_pred CCCEEEEEeCCCeEEEEeC
Q psy4391 207 NGKYILAATLDNTLKLWDS 225 (231)
Q Consensus 207 ~g~~l~~~s~d~~v~vwd~ 225 (231)
+. .++. .||.|..|-.
T Consensus 190 ~h-s~al--~~G~v~~wG~ 205 (282)
T 3qhy_B 190 FH-SLAL--KDGKVIAWGD 205 (282)
T ss_dssp SE-EEEE--ETTEEEEEEC
T ss_pred CE-EEEE--ECCeEEEEEC
Confidence 42 2333 5899988874
No 362
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=74.73 E-value=22 Score=25.96 Aligned_cols=192 Identities=13% Similarity=0.012 Sum_probs=104.1
Q ss_pred ceEEEEECCCCCEEEEEeCCCcEEEe---ecCCCcEEEEEecccccEEEEEECC-CCCEEEEecCCCcEEEEeCCCce--
Q psy4391 29 AVSSVKFSPNGEWLASSSADKLIKIW---GAYDGKFEKTISGHKLGISDVAWSS-DSRLLVSGSDDKTLKIWELSSGK-- 102 (231)
Q Consensus 29 ~i~~~~~~~~~~~l~~~~~dg~i~i~---~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~g~i~~~d~~~~~-- 102 (231)
.+..+.-....+.|+.-+.+|.++.- ++....... +......+..+.-.. +...++..+.+|.++-..+....
T Consensus 25 ~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~-ll~~~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~~~~ 103 (276)
T 3no0_A 25 PVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVS-LKSREEKIVGAFIREKFGNRLLLATKKGYVKKIPLAEFEYK 103 (276)
T ss_dssp CEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEECC-CSSTTCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGGTTTC
T ss_pred eEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCcccc-cCCCCCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHHhhhh
Confidence 45555444445555555677766543 322221111 222234455543321 45788899999999988765421
Q ss_pred ----eeeeecCCCcceEEEEECCCCCEEEEeecCCcEEEEECCC---------CceeeeccCCCCCeEEEEEcCCCCeEE
Q psy4391 103 ----CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT---------GKCLKTLPAHSDPVSAVHFNRDGSLIV 169 (231)
Q Consensus 103 ----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~---------~~~~~~~~~~~~~v~~~~~~~~~~~l~ 169 (231)
....++. .+.+..+........++..+..|.+..+.... |.....+.. ...+..+...+++..++
T Consensus 104 ~~G~~~i~lke-gD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~-~d~vv~~~~~~~~~~ll 181 (276)
T 3no0_A 104 AQGMPIIKLTE-GDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEK-NDETSGLRIWNGEPYLL 181 (276)
T ss_dssp STTEECSCCCT-TCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCT-TCCEEEEEEESSCSEEE
T ss_pred cCCeEEEecCC-CCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCC-CCEEEEEEEeCCCCEEE
Confidence 1222333 34455555555666788889999988776532 111112222 24565555555567888
Q ss_pred EEecCCeEEEEeCCCC-------ceeeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEE--EeC
Q psy4391 170 SSSYDGLCRIWDTASG-------QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL--WDS 225 (231)
Q Consensus 170 ~~~~dg~i~v~d~~~~-------~~~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~v--wd~ 225 (231)
..+..|.++...+... +-...+ .....+..+....+...++..+.+|.+.. ++.
T Consensus 182 ~~T~~G~~kr~~~~e~~~~~R~gkGv~~i--~~~~~lv~~~~~~~~~~i~~~t~~G~~ir~~~~~ 244 (276)
T 3no0_A 182 VITAKGRVKKISHEEIPKTNRGVKGTEVS--GTKDTLVDLIPIKEEVELLITTKNGKAFYDKINQ 244 (276)
T ss_dssp EEETTSCEEEEEGGGSCCCCTTCCCEECC--CSSSCEEEEEEESSEEEEEEEETTSCEEEEEEEG
T ss_pred EEeCCCcEEEeEHHHcccCCCCCcceEEE--cCCCcEEEEEEeCCCCEEEEEcCCCeEEEeeeCH
Confidence 8889998887765322 112222 22233433332233456777777887776 653
No 363
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=73.22 E-value=24 Score=29.14 Aligned_cols=58 Identities=16% Similarity=0.282 Sum_probs=40.1
Q ss_pred EEEEEECCCCCEEEEecCC------------CcEEEEeCCCceeeeeecCC-CcceEEEEECCCCCEEEEe
Q psy4391 72 ISDVAWSSDSRLLVSGSDD------------KTLKIWELSSGKCLKTLKGH-SNYVFCCNFNPQSNLIVSG 129 (231)
Q Consensus 72 v~~~~~~~~~~~l~~~~~~------------g~i~~~d~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~ 129 (231)
.-.|+|+|.|++++.-..+ ..+.+.+..+++..+.+... ...++.++|+||++.|+..
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 4678999999976665432 23555666677766555543 3578889999998887654
No 364
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=69.30 E-value=44 Score=27.55 Aligned_cols=60 Identities=13% Similarity=0.251 Sum_probs=41.2
Q ss_pred cEEEEEECCCCCEEEEecC------------CCcEEEEeCCCceeeeeecCC-CcceEEEEECCCCCEEEEee
Q psy4391 71 GISDVAWSSDSRLLVSGSD------------DKTLKIWELSSGKCLKTLKGH-SNYVFCCNFNPQSNLIVSGS 130 (231)
Q Consensus 71 ~v~~~~~~~~~~~l~~~~~------------~g~i~~~d~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~ 130 (231)
....+.|.++|.+.+.... ...+..++..+++..+.+... ...++.++|+||++.|+..-
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 3567999999987774322 125666677777765555433 35678999999998887653
No 365
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=68.31 E-value=5.3 Score=35.79 Aligned_cols=36 Identities=22% Similarity=0.374 Sum_probs=29.6
Q ss_pred eEEEEEcCCCCeEEEEecCCeEEEEeCCCCceeeee
Q psy4391 156 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 191 (231)
Q Consensus 156 v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~ 191 (231)
+.+++..++..++++-+.|+.+++|++.+++++.+.
T Consensus 240 ~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp BSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred eEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 344556677889999999999999999999887664
No 366
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=67.03 E-value=37 Score=25.30 Aligned_cols=102 Identities=16% Similarity=0.196 Sum_probs=62.5
Q ss_pred CCCEEEEecCCCcEEEEeCCCc-------eeeeeecCCCcceEEEEECCCCCEEEEeecCCcEEEEECCC---------C
Q psy4391 80 DSRLLVSGSDDKTLKIWELSSG-------KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT---------G 143 (231)
Q Consensus 80 ~~~~l~~~~~~g~i~~~d~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~---------~ 143 (231)
+..+++..+..|.++...+... .....+.. .+.+..+....+...++..+.+|.+..+.... |
T Consensus 113 ~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~G 191 (312)
T 1suu_A 113 DDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFKDEKVICLSKKGSAFIFNSRDVRLTNRGTQG 191 (312)
T ss_dssp TTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTBCC
T ss_pred CCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHccccCCCCCC
Confidence 4567888889999888776432 22223333 34454544444456788888999988887642 1
Q ss_pred ceeeeccCCCCCeEEEEEcCCCCeEEEEecCCeEEEEeCC
Q psy4391 144 KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA 183 (231)
Q Consensus 144 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~ 183 (231)
.....+.. ...+..+..-.++..+++.+..|......+.
T Consensus 192 v~~i~L~~-~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~ 230 (312)
T 1suu_A 192 VCGMKLKE-GDLFVKVLSVKENPYLLIVSENGYGKRLNMS 230 (312)
T ss_dssp EECCCCCT-TCCEEEEEECTTCSEEEEEETTSEEEEEEGG
T ss_pred eEeEEeCC-CCEEEEEEEECCCCeEEEEECCCceEEEEHH
Confidence 11122222 3455565555556678888889988888764
No 367
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=64.64 E-value=43 Score=25.21 Aligned_cols=195 Identities=9% Similarity=0.038 Sum_probs=102.8
Q ss_pred ceEEEEECCCCCEEEEEeCCCcEEEee---cCCC------cEEEE-Ee-cccccEEEE-EECC--CCCEEEEecCCCcEE
Q psy4391 29 AVSSVKFSPNGEWLASSSADKLIKIWG---AYDG------KFEKT-IS-GHKLGISDV-AWSS--DSRLLVSGSDDKTLK 94 (231)
Q Consensus 29 ~i~~~~~~~~~~~l~~~~~dg~i~i~~---~~~~------~~~~~-~~-~~~~~v~~~-~~~~--~~~~l~~~~~~g~i~ 94 (231)
.+..+......+.|+.-+..|.++... +... ..... +. .....|..+ ...+ +..+++..+.+|.++
T Consensus 43 ~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G~~i~~~l~l~~~e~i~~~~~~~~~~~e~~~v~~T~~G~iK 122 (327)
T 3uc1_A 43 IVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTARGQHVANLLAFQPEERIAQVIQIRGYTDAPYLVLATRNGLVK 122 (327)
T ss_dssp CEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSCCEEHHHHTTCCTTCCEEEEEEESSTTSSSEEEEEETTSEEE
T ss_pred EEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCCCEEHHHccCCCCCCEEEEEEEeccCCCCCEEEEEcCCCEEE
Confidence 444444445555555556677655433 3221 11000 10 112334444 3332 467899999999999
Q ss_pred EEeCCCce-------eeeeecCCCcceEEEEECCCCCEEEEeecCCcEEEEECC--CCc---------eeeeccCCCCCe
Q psy4391 95 IWELSSGK-------CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR--TGK---------CLKTLPAHSDPV 156 (231)
Q Consensus 95 ~~d~~~~~-------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~--~~~---------~~~~~~~~~~~v 156 (231)
--.+.... ....++. .+.+..+........++..+..|.+..+... .-. ....+.. ...|
T Consensus 123 r~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~~-~d~V 200 (327)
T 3uc1_A 123 KSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFNI-DDRL 200 (327)
T ss_dssp EEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCTTSBCEESSCCCT-TCCE
T ss_pred EeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCcCCCCeeeecCCC-CCEE
Confidence 87765422 1122333 3444444444455678888888988777665 211 1111222 3456
Q ss_pred EEEEEcCCCCeEEEEecCCeEEEEeCCCCce-------eeeeec-CCCCCeEEEEECCCCCEEEEEeCCCeEEEEeC
Q psy4391 157 SAVHFNRDGSLIVSSSYDGLCRIWDTASGQC-------LKTLID-DDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225 (231)
Q Consensus 157 ~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~-------~~~~~~-~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~ 225 (231)
.++...+++..++..+..|.++.-.+..... +..+.. .....+..+....+...++..+.+|.+..++.
T Consensus 201 v~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~lv~~~~~~~~~~i~l~T~~G~~ir~~~ 277 (327)
T 3uc1_A 201 LSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLVGALIVDDDSELYAVTSGGGVIRTAA 277 (327)
T ss_dssp EEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEEGGGCEEEEEG
T ss_pred EEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCeEEEEEEeCCCccEEEEcCCCeEEEEeh
Confidence 6666666667888999999988776543211 111111 11223433333334456666777777766653
No 368
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=64.45 E-value=16 Score=30.96 Aligned_cols=35 Identities=17% Similarity=0.277 Sum_probs=27.9
Q ss_pred eEEEEEcCCCCeEEEEecCCeEEEEeCCCCceeeeee
Q psy4391 156 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLI 192 (231)
Q Consensus 156 v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~ 192 (231)
|.++.+ +..++++-+.|..+++|++.+++++....
T Consensus 224 Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 224 ISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp EEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred EEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 554444 46799999999999999999998776653
No 369
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=61.82 E-value=17 Score=30.76 Aligned_cols=29 Identities=28% Similarity=0.489 Sum_probs=24.6
Q ss_pred CCCEEEEecCCCcEEEEeCCCceeeeeec
Q psy4391 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLK 108 (231)
Q Consensus 80 ~~~~l~~~~~~g~i~~~d~~~~~~~~~~~ 108 (231)
+..++++-+.|+.+|+|++++++++....
T Consensus 230 ~~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 230 HERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp TTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred CCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 46799999999999999999998766543
No 370
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=59.44 E-value=41 Score=27.08 Aligned_cols=56 Identities=9% Similarity=0.101 Sum_probs=35.7
Q ss_pred eEEEEecCCeEEEEeCC-CCc-------eeeeeec-CCCCCeEEEEECCCCCEEEEEeCCCeEEE
Q psy4391 167 LIVSSSYDGLCRIWDTA-SGQ-------CLKTLID-DDNPPVSFVKFSPNGKYILAATLDNTLKL 222 (231)
Q Consensus 167 ~l~~~~~dg~i~v~d~~-~~~-------~~~~~~~-~~~~~i~~~~~s~~g~~l~~~s~d~~v~v 222 (231)
.+..|+.+|.|.-.-+. .+. .+.++.. ....+|..|.+++++.+|++++.++.++|
T Consensus 423 V~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 423 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 46678888877544332 211 1222222 23467888999999999999998876665
No 371
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=56.89 E-value=54 Score=23.89 Aligned_cols=154 Identities=8% Similarity=-0.013 Sum_probs=84.5
Q ss_pred ccceEEEEECC-CCCEEEEEeCCCcEEEeecCCCc------EEEEEecccccEEEEEECCCCCEEEEecCCCcEEEEeCC
Q psy4391 27 TKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGK------FEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELS 99 (231)
Q Consensus 27 ~~~i~~~~~~~-~~~~l~~~~~dg~i~i~~~~~~~------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~~ 99 (231)
...|..+.... +...++..+.+|.++.....+.. ....+.. ...+..+........++..+..|.+..+...
T Consensus 67 ~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lke-gD~l~~~~~~~~~~~ill~T~~G~~~r~~~~ 145 (276)
T 3no0_A 67 EEKIVGAFIREKFGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLTE-GDEVVSIASSVDETHILLFTKKGRVARFSVR 145 (276)
T ss_dssp TCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCCT-TCCEEEEEECCSSCEEEEEETTSEEEEEEGG
T ss_pred CCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecCC-CCEEEEEEEeCCCCEEEEEECCCEEEEEEhh
Confidence 34566554421 45688888999999887754431 1111222 2344455455555677788888887777653
Q ss_pred C---------ceeeeeecCCCcceEEEEECCCCCEEEEeecCCcEEEEECCC-------CceeeeccCCCCCeEEEEEcC
Q psy4391 100 S---------GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT-------GKCLKTLPAHSDPVSAVHFNR 163 (231)
Q Consensus 100 ~---------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~-------~~~~~~~~~~~~~v~~~~~~~ 163 (231)
. |.....+.. .+.+..+...+++..++..+..|.++...+.. ++-+..+ ...+.+..+....
T Consensus 146 eip~~gR~a~Gv~~i~L~~-~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~lv~~~~~~ 223 (276)
T 3no0_A 146 EVPPSTPGARGVQGIKLEK-NDETSGLRIWNGEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDTLVDLIPIK 223 (276)
T ss_dssp GSCBCCTTCCCEECCCCCT-TCCEEEEEEESSCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSCEEEEEEES
T ss_pred hCCCcCCCCCCEEEEccCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEE-cCCCcEEEEEEeC
Confidence 2 111122322 34455554445567888889999988877632 2222233 2233444433333
Q ss_pred CCCeEEEEecCCeEEE--EeCC
Q psy4391 164 DGSLIVSSSYDGLCRI--WDTA 183 (231)
Q Consensus 164 ~~~~l~~~~~dg~i~v--~d~~ 183 (231)
+...++..+.+|.+.. ++..
T Consensus 224 ~~~~i~~~t~~G~~ir~~~~~~ 245 (276)
T 3no0_A 224 EEVELLITTKNGKAFYDKINQK 245 (276)
T ss_dssp SEEEEEEEETTSCEEEEEEEGG
T ss_pred CCCEEEEEcCCCeEEEeeeCHH
Confidence 3345666667777666 6543
No 372
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=55.42 E-value=44 Score=27.15 Aligned_cols=57 Identities=14% Similarity=0.018 Sum_probs=36.9
Q ss_pred eEEEEecCCeEEEEeCC-CC--ceeeeeecCCCCCeE-EEEECCCCCEEEEEeCCCeEEEE
Q psy4391 167 LIVSSSYDGLCRIWDTA-SG--QCLKTLIDDDNPPVS-FVKFSPNGKYILAATLDNTLKLW 223 (231)
Q Consensus 167 ~l~~~~~dg~i~v~d~~-~~--~~~~~~~~~~~~~i~-~~~~s~~g~~l~~~s~d~~v~vw 223 (231)
.+..|+.+|.|.-.-+. .. ..+..+......+|. .+.+++++.+|++++.++.++|-
T Consensus 402 V~FlGT~~G~l~Kv~~~~~~~~~~~ee~~v~~~~pi~~~l~l~~~~~~Lyv~s~~~V~~vp 462 (528)
T 3ol2_B 402 IAFLGDSQGQLHRVYLGPGSDGHPYSTQSIQQGSAVSRDLTFDGTFEHLYVMTQSTLLKVP 462 (528)
T ss_dssp EEEEEETTSEEEEEECSSSCCSCCSEEEESSTTSCCCSCCEECTTSSEEEEECSSCEEEEE
T ss_pred EEEEECCCCeEEEEEEcCCCCeeEEeeeccCCCCcceeeEEEecCCCEEEEEeCCEEEEEE
Confidence 45578888987654432 21 122333334445663 78899999999999988877763
No 373
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=54.53 E-value=25 Score=28.65 Aligned_cols=56 Identities=13% Similarity=0.186 Sum_probs=35.6
Q ss_pred eEEEEecCCeEEEEeCCCCc----eeeeeec-CCCCCeE-EEEECCCCCEEEEEeCCCeEEE
Q psy4391 167 LIVSSSYDGLCRIWDTASGQ----CLKTLID-DDNPPVS-FVKFSPNGKYILAATLDNTLKL 222 (231)
Q Consensus 167 ~l~~~~~dg~i~v~d~~~~~----~~~~~~~-~~~~~i~-~~~~s~~g~~l~~~s~d~~v~v 222 (231)
.+..|+.+|.|.-..+.... ....+.. ....+|. .|.+++++.+|++++.++.++|
T Consensus 415 V~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 415 VVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp EEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred EEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 56678889977655443221 2222222 2245674 7889999999999997766555
No 374
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=53.87 E-value=65 Score=23.88 Aligned_cols=185 Identities=12% Similarity=0.069 Sum_probs=95.3
Q ss_pred CCCEEEEEeCCCcEEEeecCCCcEEE---------EEecccccEEEEEECCCCCEEEEecCCCcEEEEe---CCC-----
Q psy4391 38 NGEWLASSSADKLIKIWGAYDGKFEK---------TISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWE---LSS----- 100 (231)
Q Consensus 38 ~~~~l~~~~~dg~i~i~~~~~~~~~~---------~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d---~~~----- 100 (231)
+...+++.+.+|.|+--...+.+... .+.. ...+..+........|+..+..|.++-+. +..
T Consensus 2 ~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke-~D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~a 80 (307)
T 1zi0_A 2 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKE-EDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGA 80 (307)
T ss_dssp CCEEEEEEETTSEEEEEECC---------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSSS
T ss_pred CCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCC-CCEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCCC
Confidence 45567777888888765554322111 1111 12233333334445566666777655443 322
Q ss_pred -ceeee---eecCCCcceEEEEE-C--CCCCEEEEeecCCcEEEEECCC-------CceeeeccCCCCCeEEEEEcCCCC
Q psy4391 101 -GKCLK---TLKGHSNYVFCCNF-N--PQSNLIVSGSFDESVRIWDVRT-------GKCLKTLPAHSDPVSAVHFNRDGS 166 (231)
Q Consensus 101 -~~~~~---~~~~~~~~v~~~~~-~--~~~~~l~~~~~d~~i~v~d~~~-------~~~~~~~~~~~~~v~~~~~~~~~~ 166 (231)
|.++. .+. ..+.+..+.. . .++..++..+.+|.++-..+.. +.....+..+ +.+..+....+..
T Consensus 81 ~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~~ 158 (307)
T 1zi0_A 81 RGRPIVNLLPLE-QDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSGED 158 (307)
T ss_dssp CCEEGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECTTC
T ss_pred CCeEhhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCCCC
Confidence 22211 122 2334544432 2 3456788899999999886631 2122223333 4454444444455
Q ss_pred eEEEEecCCeEEEEeCCCCce-------eeeeecCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeC
Q psy4391 167 LIVSSSYDGLCRIWDTASGQC-------LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225 (231)
Q Consensus 167 ~l~~~~~dg~i~v~d~~~~~~-------~~~~~~~~~~~i~~~~~s~~g~~l~~~s~d~~v~vwd~ 225 (231)
.++..+.+|.+..+....-.. ..-+.......+..+..-+++..+++.+..|.++..+.
T Consensus 159 ~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~ 224 (307)
T 1zi0_A 159 EVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAV 224 (307)
T ss_dssp EEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEECCCSSCEEEEEETTSEEEEECG
T ss_pred EEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeCCCCEEEEEEEecCCCEEEEEEcCCceEEEEH
Confidence 677788888877776532111 11111122334555554455667888899998887764
No 375
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=52.78 E-value=58 Score=26.19 Aligned_cols=56 Identities=14% Similarity=0.220 Sum_probs=36.3
Q ss_pred CEEEEeecCCcEEEE-ECCCCc-------eeeeccC--CCCCeEEEEEcCCCCeEEEEecCCeEEE
Q psy4391 124 NLIVSGSFDESVRIW-DVRTGK-------CLKTLPA--HSDPVSAVHFNRDGSLIVSSSYDGLCRI 179 (231)
Q Consensus 124 ~~l~~~~~d~~i~v~-d~~~~~-------~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~dg~i~v 179 (231)
..++.|+.+|.|.-. -...+. .+..+.. ...+|..|.++++..+|++++.++.++|
T Consensus 422 tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 422 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 467788999987533 322221 2223332 3568999999999999999988776554
No 376
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=51.87 E-value=81 Score=24.38 Aligned_cols=157 Identities=8% Similarity=0.068 Sum_probs=90.7
Q ss_pred ccEEEEEECCCCCEEEEecC---------------CCcEEEEeCCCc--eeeeeecC------CCcceEEEEEC---CC-
Q psy4391 70 LGISDVAWSSDSRLLVSGSD---------------DKTLKIWELSSG--KCLKTLKG------HSNYVFCCNFN---PQ- 122 (231)
Q Consensus 70 ~~v~~~~~~~~~~~l~~~~~---------------~g~i~~~d~~~~--~~~~~~~~------~~~~v~~~~~~---~~- 122 (231)
..|..+...+.+++.+.-.. .-.|.+||+.+. +.++.+.- ..+.+..+.++ |.
T Consensus 87 vsV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~ 166 (381)
T 3q6k_A 87 TSIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKG 166 (381)
T ss_dssp SCEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTT
T ss_pred EEeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCC
Confidence 34677777777665443111 125778999998 87766542 23456677766 22
Q ss_pred ---CCEEEEee-cCCcEEEEECCCCceeeecc----CC--------------CCCeEEEEEcCC----CCeEEEEecCC-
Q psy4391 123 ---SNLIVSGS-FDESVRIWDVRTGKCLKTLP----AH--------------SDPVSAVHFNRD----GSLIVSSSYDG- 175 (231)
Q Consensus 123 ---~~~l~~~~-~d~~i~v~d~~~~~~~~~~~----~~--------------~~~v~~~~~~~~----~~~l~~~~~dg- 175 (231)
+.+.+... ..+-|.|+|+.+++.-+... .. ...+..|+++|+ ++.|+-....+
T Consensus 167 ~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~ 246 (381)
T 3q6k_A 167 DCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAI 246 (381)
T ss_dssp TSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCS
T ss_pred CCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCC
Confidence 34444443 46679999999887543331 11 136778889987 67777665544
Q ss_pred eEEEEe---CCCCc---eeeeeecCC-CCCeEEEEEC-CCCCEEEEEeCCCeEEEEeCC
Q psy4391 176 LCRIWD---TASGQ---CLKTLIDDD-NPPVSFVKFS-PNGKYILAATLDNTLKLWDSY 226 (231)
Q Consensus 176 ~i~v~d---~~~~~---~~~~~~~~~-~~~i~~~~~s-~~g~~l~~~s~d~~v~vwd~~ 226 (231)
.+.-.. ++... .++.+-... ...-..++.+ .+|..+++--..+.|..|++.
T Consensus 247 ~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~ 305 (381)
T 3q6k_A 247 KVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQ 305 (381)
T ss_dssp EEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETT
T ss_pred cEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCC
Confidence 232221 12211 112121111 1233456776 677777777778899999975
No 377
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=48.67 E-value=83 Score=23.57 Aligned_cols=186 Identities=10% Similarity=0.076 Sum_probs=94.9
Q ss_pred CCCCEEEEEeCCCcEEEeecCC----CcEEEEEecccccEEEEEECCCCCEEEEecCCCcEEEEeC---CC------cee
Q psy4391 37 PNGEWLASSSADKLIKIWGAYD----GKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWEL---SS------GKC 103 (231)
Q Consensus 37 ~~~~~l~~~~~dg~i~i~~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d~---~~------~~~ 103 (231)
|+...+++.+.+|.|+--...+ +.....+.. ...+..+........|+..+..|.+.-+.. .. |.+
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke-~D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~ 81 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKD-TDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQH 81 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCT-TCCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEE
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcCccccccCC-CCEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCCcC
Confidence 4556677778888887654321 110011222 223333333444556666667776554433 21 222
Q ss_pred eee---ecCCCcceEEE-EECC--CCCEEEEeecCCcEEEEECC--------CCceeeeccCCCCCeEEEEEcCCCCeEE
Q psy4391 104 LKT---LKGHSNYVFCC-NFNP--QSNLIVSGSFDESVRIWDVR--------TGKCLKTLPAHSDPVSAVHFNRDGSLIV 169 (231)
Q Consensus 104 ~~~---~~~~~~~v~~~-~~~~--~~~~l~~~~~d~~i~v~d~~--------~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 169 (231)
+.. +. ..+.+..+ ...+ ++.+++..+.+|.++-..+. .|.....+... +.+..+........++
T Consensus 82 i~~~i~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e~-d~lv~~~~~~~~~~i~ 159 (323)
T 1wp5_A 82 IANIIPID-RDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKND-DQVVDVHLTDGMNELF 159 (323)
T ss_dssp GGGTSCCC-TTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTT-CCEEEEEEECSCSEEE
T ss_pred hhhccCCC-CCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCCC-CEEEEEEEeCCCCEEE
Confidence 111 22 22344443 3332 25678889999999988763 12222223322 4454444444556677
Q ss_pred EEecCCeEEEEeCCCCce-------eeeeecCCCCCeEEEEECCCCC-EEEEEeCCCeEEEEeC
Q psy4391 170 SSSYDGLCRIWDTASGQC-------LKTLIDDDNPPVSFVKFSPNGK-YILAATLDNTLKLWDS 225 (231)
Q Consensus 170 ~~~~dg~i~v~d~~~~~~-------~~~~~~~~~~~i~~~~~s~~g~-~l~~~s~d~~v~vwd~ 225 (231)
..+.+|.+..+....-.. +.-+.......+..+..-+++. .|+..+..|..+..+.
T Consensus 160 l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~ 223 (323)
T 1wp5_A 160 LVTHNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMKL 223 (323)
T ss_dssp EEETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEG
T ss_pred EEeCCCcEEEEEHHHCcccCCCCcCEEEEEeCCCCEEEEEEEEcCCCcEEEEEECCCceEEEEH
Confidence 788889887776532111 1111112233344443323344 7888888888777654
No 378
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=48.61 E-value=81 Score=26.05 Aligned_cols=57 Identities=2% Similarity=-0.002 Sum_probs=36.2
Q ss_pred eEEEEecCCeEEEEeCCC-C----c-eeeeeec-CCCCCeEEEEECCCCCEEEEEeCCCeEEEE
Q psy4391 167 LIVSSSYDGLCRIWDTAS-G----Q-CLKTLID-DDNPPVSFVKFSPNGKYILAATLDNTLKLW 223 (231)
Q Consensus 167 ~l~~~~~dg~i~v~d~~~-~----~-~~~~~~~-~~~~~i~~~~~s~~g~~l~~~s~d~~v~vw 223 (231)
.+..|+.+|.|.-.-+.. + . .+..+.. ....+|..+.+++++..|++++.++.++|-
T Consensus 382 VlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~qVP 445 (590)
T 3nvq_A 382 VLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQVP 445 (590)
T ss_dssp EEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEEEEE
T ss_pred EEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEEEcc
Confidence 566788888776443322 2 1 1112211 234578889999999999999988776663
No 379
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=46.06 E-value=1e+02 Score=23.83 Aligned_cols=189 Identities=6% Similarity=0.013 Sum_probs=106.8
Q ss_pred ccceEEEEECCCCCEEEE--EeCC-------------CcEEEeecCCC--cEEEEEec------ccccEEEEEEC---CC
Q psy4391 27 TKAVSSVKFSPNGEWLAS--SSAD-------------KLIKIWGAYDG--KFEKTISG------HKLGISDVAWS---SD 80 (231)
Q Consensus 27 ~~~i~~~~~~~~~~~l~~--~~~d-------------g~i~i~~~~~~--~~~~~~~~------~~~~v~~~~~~---~~ 80 (231)
--+|..+...+.+++-+. |..+ -.|.+||+.+. +..+.+.- ....+.++++. |.
T Consensus 86 lvsV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~ 165 (381)
T 3q6k_A 86 LTSIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPK 165 (381)
T ss_dssp SSCEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTT
T ss_pred eEEeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCC
Confidence 347888889888885443 3111 15778999988 77766542 23457778777 22
Q ss_pred ----CCEEE-EecCCCcEEEEeCCCceeeeeec----CC--------------CcceEEEEECCC----CCEEEEeecCC
Q psy4391 81 ----SRLLV-SGSDDKTLKIWELSSGKCLKTLK----GH--------------SNYVFCCNFNPQ----SNLIVSGSFDE 133 (231)
Q Consensus 81 ----~~~l~-~~~~~g~i~~~d~~~~~~~~~~~----~~--------------~~~v~~~~~~~~----~~~l~~~~~d~ 133 (231)
+.+++ +-...+.|.++|+.+++.-+.+. .. ...+..++++|+ ++.|+...-.+
T Consensus 166 ~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss 245 (381)
T 3q6k_A 166 GDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSA 245 (381)
T ss_dssp TTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSC
T ss_pred CCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCC
Confidence 23333 33346789999999877554431 00 124567788887 56666554433
Q ss_pred -cEEEEE---CCCCc---eeeeccCC--CCCeEEEEEc-CCCCeEEEEecCCeEEEEeCCC-C---ceeeeeecCC-CCC
Q psy4391 134 -SVRIWD---VRTGK---CLKTLPAH--SDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTAS-G---QCLKTLIDDD-NPP 198 (231)
Q Consensus 134 -~i~v~d---~~~~~---~~~~~~~~--~~~v~~~~~~-~~~~~l~~~~~dg~i~v~d~~~-~---~~~~~~~~~~-~~~ 198 (231)
.+.-.. ++... .++.+... ......++++ .+|.++++--....|..|+..+ . +....+.... -.-
T Consensus 246 ~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~ 325 (381)
T 3q6k_A 246 IKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVF 325 (381)
T ss_dssp SEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCS
T ss_pred CcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCccc
Confidence 233222 22221 11221111 1233456775 5777777777888999999875 1 1223332222 123
Q ss_pred eEEEEECCCCCEEEEEe
Q psy4391 199 VSFVKFSPNGKYILAAT 215 (231)
Q Consensus 199 i~~~~~s~~g~~l~~~s 215 (231)
...+.+.++|.+.+...
T Consensus 326 pd~~~i~~~g~Lwv~sn 342 (381)
T 3q6k_A 326 GTDISVDSKGGLWFMSN 342 (381)
T ss_dssp EEEEEECTTSCEEEEEC
T ss_pred cCeEEECCCCeEEEEEC
Confidence 46677888876555443
No 380
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=37.27 E-value=89 Score=26.29 Aligned_cols=56 Identities=9% Similarity=0.104 Sum_probs=35.2
Q ss_pred eEEEEecCCeEEE-EeCCCCc-------eeeeee-cCCCCCeEEEEECCCCCEEEEEeCCCeEEE
Q psy4391 167 LIVSSSYDGLCRI-WDTASGQ-------CLKTLI-DDDNPPVSFVKFSPNGKYILAATLDNTLKL 222 (231)
Q Consensus 167 ~l~~~~~dg~i~v-~d~~~~~-------~~~~~~-~~~~~~i~~~~~s~~g~~l~~~s~d~~v~v 222 (231)
.+..|+.+|.|.- .-..... .+.++. .....+|..|.+++++++|++++.++.++|
T Consensus 431 VlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 431 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 4667888887753 2211111 111111 134567888999999999999998876665
No 381
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=36.33 E-value=1.6e+02 Score=24.40 Aligned_cols=56 Identities=4% Similarity=0.072 Sum_probs=35.7
Q ss_pred CEEEEeecCCcEEEE-ECCCC----c-eeeecc--CCCCCeEEEEEcCCCCeEEEEecCCeEEE
Q psy4391 124 NLIVSGSFDESVRIW-DVRTG----K-CLKTLP--AHSDPVSAVHFNRDGSLIVSSSYDGLCRI 179 (231)
Q Consensus 124 ~~l~~~~~d~~i~v~-d~~~~----~-~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg~i~v 179 (231)
..++.|+.+|.|.-. ....+ . .+..+. ....+|..|.++++...|++++.++.+++
T Consensus 381 tVlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~qV 444 (590)
T 3nvq_A 381 HVLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQV 444 (590)
T ss_dssp EEEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEEEE
T ss_pred EEEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEEEc
Confidence 467788889987633 33222 1 122222 23568899999999888888877665544
No 382
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=35.57 E-value=1.7e+02 Score=24.52 Aligned_cols=56 Identities=7% Similarity=0.187 Sum_probs=36.5
Q ss_pred CEEEEeecCCcEE-EEECCCCce-eeec--cCCCCCeEEEEEcCCC--CeEEEEecCCeEEE
Q psy4391 124 NLIVSGSFDESVR-IWDVRTGKC-LKTL--PAHSDPVSAVHFNRDG--SLIVSSSYDGLCRI 179 (231)
Q Consensus 124 ~~l~~~~~d~~i~-v~d~~~~~~-~~~~--~~~~~~v~~~~~~~~~--~~l~~~~~dg~i~v 179 (231)
..++.|+.+|.|. +.....+.. +..+ .....+|..|.++++. .+|++++.++.+++
T Consensus 416 tV~flGT~~G~l~Kvv~~~~~~~~~ee~~~~~~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 416 DVMFVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp EEEEEEETTSEEEEEEECSSSEEEEEEEECCTTCCCCCEEEECCSSSSCEEEEECSSCEEEE
T ss_pred EEEEEEcCCcEEEEEEecCCCceEEEEecccCCCCcceeeEeccCCCccEEEEEEcCeEEEE
Confidence 4678889999874 444443322 2222 1234688899999987 88888887775544
No 383
>3oky_A Plexin-A2; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okt_A* 4gza_A
Probab=35.21 E-value=1.2e+02 Score=25.60 Aligned_cols=58 Identities=14% Similarity=0.167 Sum_probs=36.3
Q ss_pred CeEEEEecCCeEEEEeCCCC----ceeeeeec-CCCCCe-EEEEECCCCCEEEEEeCCCeEEEE
Q psy4391 166 SLIVSSSYDGLCRIWDTASG----QCLKTLID-DDNPPV-SFVKFSPNGKYILAATLDNTLKLW 223 (231)
Q Consensus 166 ~~l~~~~~dg~i~v~d~~~~----~~~~~~~~-~~~~~i-~~~~~s~~g~~l~~~s~d~~v~vw 223 (231)
..+..|+.+|.|.-.-+... ..+..+.. ....+| ..+.++++..+|++++.++.++|-
T Consensus 413 tVlFLGT~~G~l~Kv~~~~~~~~~~~~ee~~v~~~~~pI~~~l~l~~~~~~Lyv~s~~~V~qvP 476 (681)
T 3oky_A 413 SVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRVP 476 (681)
T ss_dssp EEEEEEBTTSEEEEEECCCTTTCCEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEEE
T ss_pred EEEEEECCCceEEEEEECCCCCceEEEEEeeeccCCCceeeeeEEcCCCCEEEEEecCEEEEEE
Confidence 34567888998775544321 12222211 234455 578899999999999987766663
No 384
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=34.91 E-value=1.9e+02 Score=24.36 Aligned_cols=56 Identities=13% Similarity=0.157 Sum_probs=36.2
Q ss_pred eEEEEecCCeEEEE-eCCCCce-eeeee-cCCCCCeEEEEECCCC--CEEEEEeCCCeEEE
Q psy4391 167 LIVSSSYDGLCRIW-DTASGQC-LKTLI-DDDNPPVSFVKFSPNG--KYILAATLDNTLKL 222 (231)
Q Consensus 167 ~l~~~~~dg~i~v~-d~~~~~~-~~~~~-~~~~~~i~~~~~s~~g--~~l~~~s~d~~v~v 222 (231)
.++.|+.+|.|.-. ....... +..+. .....+|..|.+++++ .+|++++.++.++|
T Consensus 417 V~flGT~~G~l~Kvv~~~~~~~~~ee~~~~~~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 417 VMFVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp EEEEEETTSEEEEEEECSSSEEEEEEEECCTTCCCCCEEEECCSSSSCEEEEECSSCEEEE
T ss_pred EEEEEcCCcEEEEEEecCCCceEEEEecccCCCCcceeeEeccCCCccEEEEEEcCeEEEE
Confidence 56788889977543 4333222 22221 1234577889999998 99999998776665
No 385
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=33.02 E-value=2.3e+02 Score=24.06 Aligned_cols=193 Identities=15% Similarity=0.134 Sum_probs=96.1
Q ss_pred ceEEEE-ECCCCCEEEEE-eCC----CcEEEeecCCCcEEEE-Ee-cccc------cEEEEEECCCCCEEEEec------
Q psy4391 29 AVSSVK-FSPNGEWLASS-SAD----KLIKIWGAYDGKFEKT-IS-GHKL------GISDVAWSSDSRLLVSGS------ 88 (231)
Q Consensus 29 ~i~~~~-~~~~~~~l~~~-~~d----g~i~i~~~~~~~~~~~-~~-~~~~------~v~~~~~~~~~~~l~~~~------ 88 (231)
....+. ++|++++++.+ +.. ..++++|+.+++.+.. +. ..+. ....++|..++..+++..
T Consensus 130 ~~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~ 209 (711)
T 4hvt_A 130 AYRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEI 209 (711)
T ss_dssp EEEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCB
T ss_pred EEeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCc
Confidence 345566 89999987653 222 3689999988765421 11 0000 113347864443333211
Q ss_pred ----CCCcEEEEeCCCce--eeeeecCCCcc-eEEEEECCCCC-----EEEEeecC---CcEEEEECCC--CceeeeccC
Q psy4391 89 ----DDKTLKIWELSSGK--CLKTLKGHSNY-VFCCNFNPQSN-----LIVSGSFD---ESVRIWDVRT--GKCLKTLPA 151 (231)
Q Consensus 89 ----~~g~i~~~d~~~~~--~~~~~~~~~~~-v~~~~~~~~~~-----~l~~~~~d---~~i~v~d~~~--~~~~~~~~~ 151 (231)
.-..|+.|.+-+.. -...+.+.... ......+++++ .+++.+.+ ..+.+.|... ++ ...+..
T Consensus 210 ~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~l~~ 288 (711)
T 4hvt_A 210 TSSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLK-LQKINM 288 (711)
T ss_dssp CTTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCE-EEECCS
T ss_pred CcCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCc-ceEeec
Confidence 12357888775532 22233332222 23445566665 24433322 3466667653 32 223322
Q ss_pred CCCCeEEEEEcCCCCeEEEE----------ecCCeEEEEeCCCCc-------eeee-eecCCCCCeEEEEECCCCCEEEE
Q psy4391 152 HSDPVSAVHFNRDGSLIVSS----------SYDGLCRIWDTASGQ-------CLKT-LIDDDNPPVSFVKFSPNGKYILA 213 (231)
Q Consensus 152 ~~~~v~~~~~~~~~~~l~~~----------~~dg~i~v~d~~~~~-------~~~~-~~~~~~~~i~~~~~s~~g~~l~~ 213 (231)
..... +..+.++.+++.. ...+.|.+.|+.+.. .... +.......+..+.+..+ .++++
T Consensus 289 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~~~ 365 (711)
T 4hvt_A 289 PSDAT--LQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVFLA 365 (711)
T ss_dssp CTTCE--EEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEEEE
T ss_pred CCcce--EeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEEEE
Confidence 22221 2233455544422 245678888876531 2233 33333445667788876 45666
Q ss_pred EeCCC--eEEEEeC
Q psy4391 214 ATLDN--TLKLWDS 225 (231)
Q Consensus 214 ~s~d~--~v~vwd~ 225 (231)
...++ .+.++|.
T Consensus 366 ~~~~~~~~l~~~~~ 379 (711)
T 4hvt_A 366 TYDNVVAKVVTFTL 379 (711)
T ss_dssp EEETTEEEEEEECE
T ss_pred EEECCEEEEEEEEC
Confidence 66666 5666663
No 386
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=32.69 E-value=64 Score=26.28 Aligned_cols=57 Identities=9% Similarity=0.154 Sum_probs=36.5
Q ss_pred CCEEEEeecCCcEEEEECCCCc----eeeecc--CCCCCeE-EEEEcCCCCeEEEEecCCeEEE
Q psy4391 123 SNLIVSGSFDESVRIWDVRTGK----CLKTLP--AHSDPVS-AVHFNRDGSLIVSSSYDGLCRI 179 (231)
Q Consensus 123 ~~~l~~~~~d~~i~v~d~~~~~----~~~~~~--~~~~~v~-~~~~~~~~~~l~~~~~dg~i~v 179 (231)
...++.|+.+|.|.-.-+.... .+..+. ....+|. .|.+++++.+|++++.++.++|
T Consensus 413 ~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 413 YSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp EEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred eEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 3567788899987644443221 222222 2245775 8999999999999887765544
No 387
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=30.55 E-value=1.5e+02 Score=25.04 Aligned_cols=56 Identities=14% Similarity=0.223 Sum_probs=36.2
Q ss_pred CEEEEeecCCcEE-EEECCCCc-------eeeec--cCCCCCeEEEEEcCCCCeEEEEecCCeEEE
Q psy4391 124 NLIVSGSFDESVR-IWDVRTGK-------CLKTL--PAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 179 (231)
Q Consensus 124 ~~l~~~~~d~~i~-v~d~~~~~-------~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v 179 (231)
..++.|+.+|.|. +.-...+. .+..+ .....+|..|.++++...|++++.++.++|
T Consensus 430 tVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 430 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 4677888999875 43322221 12222 234568899999999999999988876554
No 388
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=29.16 E-value=1.9e+02 Score=22.10 Aligned_cols=144 Identities=11% Similarity=0.081 Sum_probs=77.8
Q ss_pred CCCCCEEEEEeCCCcEEEeecCC---------CcEEEEEecccccEEEEEECCCCCEEEEecCCCcEEEEe---CCC---
Q psy4391 36 SPNGEWLASSSADKLIKIWGAYD---------GKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWE---LSS--- 100 (231)
Q Consensus 36 ~~~~~~l~~~~~dg~i~i~~~~~---------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~d---~~~--- 100 (231)
-|+...+++.+.+|.|+--...+ +.....+.. ...+..+........++..+..|.++-+. +..
T Consensus 4 I~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lke-~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~r 82 (370)
T 3l6v_A 4 IAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTKE-EDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAGS 82 (370)
T ss_dssp CCCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECSC-CCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCT
T ss_pred ccCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccCC-CCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCCCc
Confidence 46677888888999888743211 122222332 23344444444555666666777665443 322
Q ss_pred ---ceeeee---ecCCCcceEEEE-EC--CCCCEEEEeecCCcEEEEECCC-------CceeeeccCCCCCeEEEEEcCC
Q psy4391 101 ---GKCLKT---LKGHSNYVFCCN-FN--PQSNLIVSGSFDESVRIWDVRT-------GKCLKTLPAHSDPVSAVHFNRD 164 (231)
Q Consensus 101 ---~~~~~~---~~~~~~~v~~~~-~~--~~~~~l~~~~~d~~i~v~d~~~-------~~~~~~~~~~~~~v~~~~~~~~ 164 (231)
|..+.. +. ....|..+. .. .++.+++..+..|.++-..+.. |.....+.. .+.+..+.....
T Consensus 83 ~a~G~~i~~ll~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~-~d~lv~v~~~~~ 160 (370)
T 3l6v_A 83 NARGRPIINWIPLE-SGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDE-GDALVGVALTDG 160 (370)
T ss_dssp TSCCEEGGGSCCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCT-TCCEEEEEEECS
T ss_pred ccCCcCHhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCC-CCEEEEEEEeCC
Confidence 222111 22 234454443 32 2456899999999999877532 222222322 334444444445
Q ss_pred CCeEEEEecCCeEEEEeC
Q psy4391 165 GSLIVSSSYDGLCRIWDT 182 (231)
Q Consensus 165 ~~~l~~~~~dg~i~v~d~ 182 (231)
...++..+.+|.+..+..
T Consensus 161 ~~~i~l~T~~G~~irf~~ 178 (370)
T 3l6v_A 161 DRDVLLFASNGKTVRFGE 178 (370)
T ss_dssp CCEEEEEETTSEEEEEEG
T ss_pred CceEEEEeCCCeEEEEEc
Confidence 556777788888777764
No 389
>3oky_B Putative uncharacterized protein; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okw_A* 3afc_A* 3al8_A*
Probab=27.05 E-value=2.3e+02 Score=23.35 Aligned_cols=28 Identities=7% Similarity=0.014 Sum_probs=23.2
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCeEEEE
Q psy4391 196 NPPVSFVKFSPNGKYILAATLDNTLKLW 223 (231)
Q Consensus 196 ~~~i~~~~~s~~g~~l~~~s~d~~v~vw 223 (231)
..+|..+.+++++..|++++.++.++|-
T Consensus 469 ~~pI~~L~ls~~~~~LYV~s~~~V~qVP 496 (565)
T 3oky_B 469 DKRIMGMQLDRASGSLYVAFSTCVIKVP 496 (565)
T ss_dssp CCCCCEEEEEGGGTEEEEECSSCEEEEE
T ss_pred CCceEEEEEcCCCCEEEEEecCeEEEee
Confidence 4567789999999999999988877764
No 390
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=25.20 E-value=2.1e+02 Score=21.30 Aligned_cols=194 Identities=13% Similarity=0.045 Sum_probs=96.5
Q ss_pred ceEEEEECCCCCEEEEEeCCCcEEEeecC---CC------cEEEE-Ee-cccccEEEE-EECC--CCCEEEEecCCCcEE
Q psy4391 29 AVSSVKFSPNGEWLASSSADKLIKIWGAY---DG------KFEKT-IS-GHKLGISDV-AWSS--DSRLLVSGSDDKTLK 94 (231)
Q Consensus 29 ~i~~~~~~~~~~~l~~~~~dg~i~i~~~~---~~------~~~~~-~~-~~~~~v~~~-~~~~--~~~~l~~~~~~g~i~ 94 (231)
.+..+......+.|+..+..|.+.-+... .. ..... +. .....|..+ ...+ ++.+++.++..|.++
T Consensus 40 ~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~i~~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iK 119 (323)
T 1wp5_A 40 RLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQHIANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVK 119 (323)
T ss_dssp CEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEEGGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEE
T ss_pred EEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCCcChhhccCCCCCCEEEEEEEecccCCCceEEEEeCCCeEE
Confidence 34444444455566666677776554431 11 10000 10 112234443 3332 256788899999999
Q ss_pred EEeCCCce--------eeeeecCCCcceEEEEECCCCCEEEEeecCCcEEEEECCC----C---ceeeeccC-CCCCeEE
Q psy4391 95 IWELSSGK--------CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT----G---KCLKTLPA-HSDPVSA 158 (231)
Q Consensus 95 ~~d~~~~~--------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~----~---~~~~~~~~-~~~~v~~ 158 (231)
--.+.... ....+... +.+..+........++..+.+|.+..+.... + +-+.-+.. ....|.+
T Consensus 120 rt~l~e~~~~~r~~G~~ai~l~e~-d~lv~~~~~~~~~~i~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~Vv~ 198 (323)
T 1wp5_A 120 KTELKHYKAQRYSKPLTGINLKND-DQVVDVHLTDGMNELFLVTHNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVS 198 (323)
T ss_dssp EEEGGGGCCSCCSSCEECSCCCTT-CCEEEEEEECSCSEEEEEETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEE
T ss_pred EeEHHHhhhccccCceEEEEeCCC-CEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHCcccCCCCcCEEEEEeCCCCEEEE
Confidence 87764221 11223333 4444444444556777888889888776532 1 11121211 1234555
Q ss_pred EEEcCCCC-eEEEEecCCeEEEEeCCCC-------ceeeee--ecCCCCCeE-EEEECCCCCEEEEEeCCCeEEEEe
Q psy4391 159 VHFNRDGS-LIVSSSYDGLCRIWDTASG-------QCLKTL--IDDDNPPVS-FVKFSPNGKYILAATLDNTLKLWD 224 (231)
Q Consensus 159 ~~~~~~~~-~l~~~~~dg~i~v~d~~~~-------~~~~~~--~~~~~~~i~-~~~~s~~g~~l~~~s~d~~v~vwd 224 (231)
+...+++. .+++.+..|..+..++... +-+..+ .......+. ...+.++ ..++..+.+|.+....
T Consensus 199 ~~~~~~~~~~ll~vt~~G~gKr~~~~e~~~~~Rg~kGv~~~~~~~~~~~~l~~~~~v~~~-~~i~~it~~g~~ir~~ 274 (323)
T 1wp5_A 199 GQLITSKDESIVVATQRGAVKKMKLTEFEKATRAKRGVVILRELKANPHRISGFVVAQDS-DTIYLQTEKSFIETIK 274 (323)
T ss_dssp EEEECCTTCEEEEEETTSEEEEEEGGGSCCCCTTSCCEECSCCCSSSCCCEEEEEEECTT-CEEEEEETTSCEEEEE
T ss_pred EEEEcCCCcEEEEEECCCceEEEEHHHccccCCCCCCEECeeecCCCCceEEEEEEeCCC-CeEEEEeCCCeEEEEE
Confidence 54434444 6888888888777665431 111111 111122343 3334443 4566666677665554
No 391
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=22.82 E-value=2.3e+02 Score=20.85 Aligned_cols=143 Identities=15% Similarity=0.099 Sum_probs=77.2
Q ss_pred CCCEEEEecCCCcEEEEeCCCc-------eeeeeecCCCcceEEEEECCCCCEEEEeecCCcEEEEECCCC-------ce
Q psy4391 80 DSRLLVSGSDDKTLKIWELSSG-------KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG-------KC 145 (231)
Q Consensus 80 ~~~~l~~~~~~g~i~~~d~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~-------~~ 145 (231)
++.+++..+..|.++--.+... .....+... +.+..+........++..+.+|.+..+....- +-
T Consensus 108 ~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~~~i~l~T~~G~~irf~~~~v~~~gr~a~G 186 (307)
T 1zi0_A 108 EGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTG 186 (307)
T ss_dssp TTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTCCC
T ss_pred CCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCCCCEEEEECCCCcEEEEEHHHcCccCCCCCC
Confidence 4567888899999988766421 111223333 44444444444556777888888877765321 11
Q ss_pred ee--eccCCCCCeEEEEEcCCCCeEEEEecCCeEEEEeCCCCce-------eeee-ecCCCCCeEE-EEECCCCCEEEEE
Q psy4391 146 LK--TLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC-------LKTL-IDDDNPPVSF-VKFSPNGKYILAA 214 (231)
Q Consensus 146 ~~--~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~-------~~~~-~~~~~~~i~~-~~~s~~g~~l~~~ 214 (231)
+. .+.. ...|.++....++..+++.+..|..+-.++..... ...+ .......+.. ....++ ..++..
T Consensus 187 v~~i~L~~-~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~e~~~~~Rg~kG~~~~~~~~~~~~lv~~~~v~~~-~~l~~~ 264 (307)
T 1zi0_A 187 VRGIRLGE-GDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQVDDC-DQIMMI 264 (307)
T ss_dssp EECCCCCT-TCCEEEEECCCSSCEEEEEETTSEEEEECGGGSCCCCTTSCCEESSCCCTTTCSEEEEEEECTT-CEEEEE
T ss_pred eEeEEeCC-CCEEEEEEEecCCCEEEEEEcCCceEEEEHHHhccCCCCCCCEEeeEecCCCCeEEEEEEeCCC-ceEEEE
Confidence 11 2222 34566665545566788888899888776632110 1111 1112233333 333443 456666
Q ss_pred eCCCeEEEEeC
Q psy4391 215 TLDNTLKLWDS 225 (231)
Q Consensus 215 s~d~~v~vwd~ 225 (231)
+.+|.+.-+..
T Consensus 265 t~~g~~ir~~~ 275 (307)
T 1zi0_A 265 TDAGTLVRTRV 275 (307)
T ss_dssp ESSCCEEEEEG
T ss_pred cCCCcEEEEec
Confidence 67777665553
No 392
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=20.35 E-value=4.1e+02 Score=22.74 Aligned_cols=60 Identities=12% Similarity=0.114 Sum_probs=35.7
Q ss_pred ccceEEEEECCCC-CEEEEEeCCCcEEEeecCCCcEEEEEec-------ccccEEEEEECCCC-CEEEEe
Q psy4391 27 TKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDGKFEKTISG-------HKLGISDVAWSSDS-RLLVSG 87 (231)
Q Consensus 27 ~~~i~~~~~~~~~-~~l~~~~~dg~i~i~~~~~~~~~~~~~~-------~~~~v~~~~~~~~~-~~l~~~ 87 (231)
.+.|.+++++|.. ..+++++..+.|...+-. ++.-..+.. ....+.+++++|.. +.++.+
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~Dg-G~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~ 82 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWDAG-TSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLA 82 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEETT-TTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEE
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEecCC-CCCeeECccCCCcccccCCceeEEEECCCCCCEEEEE
Confidence 4689999999963 466667767766555432 332222222 12468899998843 344443
Done!