Query psy4393
Match_columns 247
No_of_seqs 280 out of 1295
Neff 11.0
Searched_HMMs 46136
Date Sat Aug 17 00:24:25 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4393.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/4393hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0272|consensus 100.0 4.1E-41 8.8E-46 256.7 16.4 223 16-239 206-431 (459)
2 KOG0263|consensus 100.0 1.5E-39 3.3E-44 264.7 22.2 209 19-228 443-651 (707)
3 KOG0271|consensus 100.0 2.8E-39 6.1E-44 244.2 20.7 227 17-244 105-415 (480)
4 KOG0272|consensus 100.0 3.9E-39 8.5E-44 245.8 18.0 216 24-240 172-389 (459)
5 KOG0279|consensus 100.0 5.1E-36 1.1E-40 218.0 25.2 215 16-233 52-269 (315)
6 KOG0286|consensus 100.0 3.4E-35 7.5E-40 215.1 27.8 223 14-238 42-271 (343)
7 KOG0266|consensus 100.0 2.9E-35 6.3E-40 242.4 29.9 228 13-240 144-378 (456)
8 KOG0271|consensus 100.0 1.9E-36 4.1E-41 229.0 20.1 215 20-236 150-449 (480)
9 KOG0279|consensus 100.0 4.3E-34 9.3E-39 208.0 26.8 220 16-236 4-232 (315)
10 KOG0315|consensus 100.0 3.8E-34 8.3E-39 205.4 24.8 220 20-240 76-302 (311)
11 KOG0266|consensus 100.0 2.9E-33 6.4E-38 230.5 27.2 219 19-237 195-420 (456)
12 KOG0263|consensus 100.0 1.1E-33 2.3E-38 230.7 22.8 218 21-239 372-620 (707)
13 KOG0286|consensus 100.0 1.3E-32 2.8E-37 201.6 26.0 210 27-237 97-314 (343)
14 KOG0273|consensus 100.0 5.3E-33 1.2E-37 215.1 24.4 222 21-244 270-500 (524)
15 PTZ00421 coronin; Provisional 100.0 7.9E-32 1.7E-36 221.8 31.9 212 23-234 71-298 (493)
16 KOG0291|consensus 100.0 1.5E-32 3.2E-37 223.3 25.6 208 24-233 347-557 (893)
17 KOG0284|consensus 100.0 2.3E-34 5E-39 219.1 12.2 203 23-225 175-379 (464)
18 KOG0285|consensus 100.0 2.8E-32 6.1E-37 204.9 23.0 218 12-230 136-393 (460)
19 KOG0316|consensus 100.0 2.1E-32 4.5E-37 195.1 20.6 218 20-242 10-229 (307)
20 KOG0295|consensus 100.0 5.4E-33 1.2E-37 208.9 17.0 217 20-237 143-375 (406)
21 KOG0284|consensus 100.0 8.7E-34 1.9E-38 216.0 12.3 211 24-236 135-347 (464)
22 cd00200 WD40 WD40 domain, foun 100.0 1.6E-30 3.4E-35 201.6 29.3 212 22-234 4-215 (289)
23 KOG0645|consensus 100.0 4.9E-30 1.1E-34 186.3 27.2 208 17-225 4-224 (312)
24 KOG0265|consensus 100.0 2.7E-31 5.9E-36 195.2 21.0 204 23-228 43-248 (338)
25 KOG0295|consensus 100.0 3.8E-31 8.3E-36 199.0 21.7 204 22-226 188-406 (406)
26 KOG0318|consensus 100.0 3.2E-30 6.9E-35 202.3 27.5 220 14-233 177-567 (603)
27 KOG0643|consensus 100.0 3.1E-30 6.8E-35 187.1 24.9 215 22-237 5-231 (327)
28 PTZ00420 coronin; Provisional 100.0 2.3E-29 5E-34 208.6 32.1 209 20-229 67-296 (568)
29 KOG0282|consensus 100.0 3.9E-32 8.5E-37 210.8 14.4 217 19-236 206-472 (503)
30 KOG0640|consensus 100.0 3.8E-30 8.3E-35 190.5 20.5 226 12-237 97-346 (430)
31 cd00200 WD40 WD40 domain, foun 100.0 1.5E-28 3.4E-33 190.4 30.8 216 21-237 45-260 (289)
32 KOG0273|consensus 100.0 9.1E-30 2E-34 197.3 23.2 213 27-242 235-456 (524)
33 KOG0291|consensus 100.0 2.1E-29 4.5E-34 205.1 26.2 210 17-227 297-509 (893)
34 KOG0296|consensus 100.0 1.5E-29 3.2E-34 190.5 22.8 221 19-242 98-372 (399)
35 KOG0315|consensus 100.0 8.3E-29 1.8E-33 178.1 25.1 200 27-228 40-247 (311)
36 KOG0289|consensus 100.0 3.5E-29 7.6E-34 192.3 22.1 217 20-236 254-474 (506)
37 PLN00181 protein SPA1-RELATED; 100.0 3.9E-28 8.5E-33 213.3 31.8 212 25-239 481-709 (793)
38 KOG0296|consensus 100.0 2.2E-28 4.7E-33 184.3 25.1 216 20-235 57-272 (399)
39 KOG0283|consensus 100.0 5.8E-29 1.3E-33 204.6 22.0 209 25-236 265-542 (712)
40 KOG0316|consensus 100.0 1.1E-28 2.5E-33 176.1 20.6 219 18-240 50-271 (307)
41 PTZ00421 coronin; Provisional 100.0 1.6E-27 3.4E-32 196.5 30.2 203 27-229 20-248 (493)
42 KOG0318|consensus 100.0 8.9E-28 1.9E-32 188.6 26.8 217 20-238 52-277 (603)
43 PLN00181 protein SPA1-RELATED; 100.0 1.4E-27 3E-32 209.9 31.1 206 26-234 531-746 (793)
44 KOG0310|consensus 100.0 7.5E-29 1.6E-33 192.8 20.1 201 26-228 67-270 (487)
45 KOG0645|consensus 100.0 1.2E-27 2.5E-32 174.0 24.6 203 17-226 50-261 (312)
46 KOG0275|consensus 100.0 5.7E-30 1.2E-34 190.8 12.9 206 25-230 211-471 (508)
47 KOG0643|consensus 100.0 5.1E-28 1.1E-32 175.6 22.3 203 21-224 46-315 (327)
48 KOG0278|consensus 100.0 4E-29 8.6E-34 179.9 16.2 204 25-231 98-302 (334)
49 KOG0292|consensus 100.0 1.7E-28 3.6E-33 203.1 21.6 211 24-234 48-288 (1202)
50 KOG0319|consensus 100.0 1.5E-28 3.3E-33 199.6 19.6 203 24-227 408-620 (775)
51 KOG0276|consensus 100.0 3.7E-28 8E-33 194.4 21.2 203 27-230 55-261 (794)
52 KOG1407|consensus 100.0 5.4E-28 1.2E-32 174.9 19.6 211 21-233 14-268 (313)
53 KOG0277|consensus 100.0 2.7E-28 5.8E-33 175.9 18.0 203 25-227 58-266 (311)
54 KOG0265|consensus 100.0 8.9E-28 1.9E-32 176.8 21.1 207 22-229 85-299 (338)
55 PTZ00420 coronin; Provisional 100.0 1.4E-26 2.9E-31 192.2 30.4 194 45-239 50-262 (568)
56 KOG0285|consensus 100.0 1.2E-27 2.7E-32 180.1 21.5 210 17-227 183-440 (460)
57 KOG0281|consensus 100.0 1.8E-29 3.8E-34 189.6 11.5 198 21-229 231-431 (499)
58 KOG0306|consensus 100.0 6.9E-28 1.5E-32 196.3 20.9 223 21-244 448-682 (888)
59 KOG0294|consensus 100.0 5.7E-27 1.2E-31 173.7 23.1 212 13-228 29-283 (362)
60 KOG0319|consensus 100.0 3.8E-28 8.2E-33 197.3 18.3 215 22-237 360-588 (775)
61 KOG0276|consensus 100.0 9.5E-28 2.1E-32 192.1 19.9 218 21-239 7-228 (794)
62 KOG1446|consensus 100.0 5E-26 1.1E-30 168.7 27.3 216 24-241 11-232 (311)
63 KOG0274|consensus 100.0 8.2E-27 1.8E-31 192.8 24.9 213 17-237 239-452 (537)
64 KOG1446|consensus 100.0 1.1E-25 2.5E-30 166.9 27.5 216 19-237 48-273 (311)
65 KOG0282|consensus 100.0 4.5E-28 9.8E-33 188.4 15.3 204 19-224 250-503 (503)
66 KOG0973|consensus 100.0 7.2E-27 1.6E-31 197.0 23.8 211 17-227 59-356 (942)
67 KOG0264|consensus 100.0 4.2E-27 9.1E-32 181.7 20.4 225 2-227 153-405 (422)
68 KOG0292|consensus 100.0 1.7E-27 3.6E-32 197.2 18.8 203 25-227 7-237 (1202)
69 KOG0647|consensus 100.0 1.3E-26 2.7E-31 171.0 21.3 214 26-240 26-295 (347)
70 KOG0277|consensus 100.0 2E-27 4.4E-32 171.4 15.5 205 21-225 98-308 (311)
71 KOG0646|consensus 100.0 8.2E-27 1.8E-31 180.7 19.7 208 27-235 81-316 (476)
72 KOG0641|consensus 100.0 3.8E-25 8.1E-30 157.6 26.2 217 19-237 81-318 (350)
73 KOG0293|consensus 100.0 1.2E-26 2.5E-31 177.7 19.5 220 17-239 259-483 (519)
74 KOG0293|consensus 100.0 1.2E-26 2.6E-31 177.6 18.8 222 21-245 218-444 (519)
75 KOG0640|consensus 100.0 1.4E-26 2.9E-31 171.7 18.2 178 14-191 159-343 (430)
76 KOG0313|consensus 100.0 6.3E-26 1.4E-30 171.9 21.3 198 25-226 191-418 (423)
77 KOG0313|consensus 100.0 8E-26 1.7E-30 171.3 21.4 218 18-237 135-388 (423)
78 KOG0772|consensus 100.0 1.5E-26 3.4E-31 181.4 18.1 218 16-233 156-402 (641)
79 KOG0269|consensus 100.0 2.4E-27 5.1E-32 193.6 13.9 212 28-239 88-310 (839)
80 KOG0305|consensus 99.9 6.3E-26 1.4E-30 182.0 21.6 210 27-240 217-433 (484)
81 KOG0289|consensus 99.9 6.1E-26 1.3E-30 174.7 20.5 210 27-237 219-430 (506)
82 KOG0281|consensus 99.9 1.1E-27 2.4E-32 179.9 10.4 203 26-239 196-401 (499)
83 KOG0306|consensus 99.9 1.7E-25 3.8E-30 182.4 23.1 229 13-245 359-602 (888)
84 KOG0300|consensus 99.9 3.1E-26 6.7E-31 170.5 16.8 226 17-243 138-404 (481)
85 KOG0288|consensus 99.9 2.2E-26 4.8E-31 176.0 16.3 218 19-240 211-431 (459)
86 KOG0264|consensus 99.9 2.1E-25 4.5E-30 172.4 21.1 204 24-227 121-348 (422)
87 KOG0310|consensus 99.9 6.9E-25 1.5E-29 170.9 23.4 199 23-225 106-308 (487)
88 KOG0308|consensus 99.9 2.8E-26 6E-31 184.3 15.1 213 26-239 20-256 (735)
89 KOG0299|consensus 99.9 2.4E-25 5.2E-30 172.4 18.9 202 25-228 200-412 (479)
90 KOG0274|consensus 99.9 7.9E-25 1.7E-29 181.1 23.2 206 26-239 207-414 (537)
91 KOG1407|consensus 99.9 1.1E-24 2.3E-29 158.0 20.5 195 20-217 57-293 (313)
92 KOG0275|consensus 99.9 7E-27 1.5E-31 174.4 9.5 198 26-224 262-507 (508)
93 KOG0268|consensus 99.9 3.7E-26 8.1E-31 172.3 13.3 211 21-233 60-352 (433)
94 KOG1273|consensus 99.9 6.3E-25 1.4E-29 163.1 19.2 208 30-238 26-292 (405)
95 KOG4283|consensus 99.9 6.3E-25 1.4E-29 161.9 18.7 204 25-229 41-279 (397)
96 KOG0267|consensus 99.9 9E-27 2E-31 189.1 9.8 196 22-218 65-260 (825)
97 KOG1332|consensus 99.9 6.2E-25 1.4E-29 157.8 17.9 210 18-227 47-287 (299)
98 KOG0283|consensus 99.9 1.3E-24 2.7E-29 179.3 22.0 204 21-227 363-577 (712)
99 KOG1274|consensus 99.9 5.2E-24 1.1E-28 177.1 25.4 203 25-227 11-263 (933)
100 KOG0973|consensus 99.9 2.1E-24 4.6E-29 182.2 22.5 213 23-235 8-321 (942)
101 KOG0278|consensus 99.9 1.2E-25 2.5E-30 162.1 11.8 216 22-241 9-228 (334)
102 KOG0299|consensus 99.9 2.7E-24 5.8E-29 166.6 18.8 216 21-239 136-369 (479)
103 KOG0308|consensus 99.9 9.8E-25 2.1E-29 175.5 16.8 205 23-228 69-287 (735)
104 KOG0305|consensus 99.9 5.1E-24 1.1E-28 171.1 20.9 205 22-230 254-465 (484)
105 KOG0288|consensus 99.9 1.1E-24 2.3E-29 166.8 15.6 204 17-224 251-459 (459)
106 KOG0267|consensus 99.9 7.2E-26 1.6E-30 183.9 9.2 206 24-230 25-230 (825)
107 KOG0772|consensus 99.9 2.2E-24 4.7E-29 169.5 17.0 200 24-224 265-485 (641)
108 KOG0301|consensus 99.9 8.3E-24 1.8E-28 171.2 18.6 195 20-226 94-288 (745)
109 KOG1036|consensus 99.9 3.8E-23 8.2E-28 153.0 20.3 203 27-235 13-271 (323)
110 KOG0269|consensus 99.9 2.4E-24 5.2E-29 176.2 14.1 207 22-228 128-342 (839)
111 KOG0302|consensus 99.9 2.2E-23 4.7E-28 158.2 17.8 208 18-227 142-379 (440)
112 KOG0303|consensus 99.9 7.9E-23 1.7E-27 156.0 20.7 216 23-239 77-307 (472)
113 KOG0300|consensus 99.9 4.1E-23 8.8E-28 154.0 17.3 206 21-229 184-431 (481)
114 KOG2096|consensus 99.9 1E-22 2.2E-27 151.7 19.2 204 22-227 81-309 (420)
115 KOG2055|consensus 99.9 4.8E-22 1E-26 154.4 22.9 200 27-227 213-418 (514)
116 KOG1539|consensus 99.9 1.4E-22 3.1E-27 167.2 20.5 202 28-232 449-654 (910)
117 KOG1332|consensus 99.9 2E-23 4.4E-28 150.1 13.5 203 24-226 8-241 (299)
118 KOG0302|consensus 99.9 9.3E-23 2E-27 154.8 17.5 202 17-219 201-432 (440)
119 KOG0639|consensus 99.9 2.3E-23 5.1E-28 163.5 14.5 197 27-225 465-703 (705)
120 KOG2048|consensus 99.9 5.9E-21 1.3E-25 154.5 26.9 203 26-230 24-237 (691)
121 KOG4328|consensus 99.9 3.5E-22 7.5E-27 155.0 17.9 203 24-226 183-399 (498)
122 TIGR03866 PQQ_ABC_repeats PQQ- 99.9 4.4E-20 9.5E-25 145.0 29.9 211 29-243 74-296 (300)
123 KOG0270|consensus 99.9 2.9E-22 6.4E-27 154.8 16.4 208 24-231 240-454 (463)
124 KOG0641|consensus 99.9 2.9E-20 6.3E-25 132.8 23.7 204 22-226 131-349 (350)
125 KOG0646|consensus 99.9 1.6E-21 3.4E-26 151.7 18.4 184 24-209 120-332 (476)
126 KOG0639|consensus 99.9 5.7E-22 1.2E-26 155.7 16.1 200 25-225 417-662 (705)
127 KOG2445|consensus 99.9 2.1E-20 4.5E-25 138.8 22.6 202 24-226 10-318 (361)
128 KOG0301|consensus 99.9 2.4E-21 5.3E-26 157.1 19.1 205 17-230 47-253 (745)
129 KOG0647|consensus 99.9 6.8E-21 1.5E-25 140.9 19.5 189 25-215 70-312 (347)
130 KOG2048|consensus 99.9 4.1E-20 8.8E-25 149.7 25.4 214 12-228 53-277 (691)
131 KOG1408|consensus 99.9 2E-21 4.3E-26 158.5 17.6 200 25-225 457-712 (1080)
132 KOG2096|consensus 99.9 1E-20 2.2E-25 141.2 19.2 196 25-224 185-400 (420)
133 KOG1274|consensus 99.9 1.2E-20 2.5E-25 157.4 21.2 193 27-224 96-298 (933)
134 KOG1036|consensus 99.9 1.9E-20 4.2E-25 138.8 19.7 186 25-216 52-294 (323)
135 TIGR03866 PQQ_ABC_repeats PQQ- 99.9 9.5E-19 2.1E-23 137.4 30.6 208 22-233 26-244 (300)
136 KOG1524|consensus 99.9 2.1E-21 4.5E-26 153.7 14.4 184 22-222 99-282 (737)
137 KOG0290|consensus 99.9 1.2E-20 2.6E-25 139.0 16.7 217 25-243 94-341 (364)
138 KOG4378|consensus 99.9 4.7E-21 1E-25 150.4 15.0 203 33-237 85-292 (673)
139 KOG0771|consensus 99.9 7.3E-21 1.6E-25 146.3 15.4 196 31-227 148-355 (398)
140 KOG2106|consensus 99.9 2.9E-19 6.3E-24 140.6 23.8 193 28-228 247-479 (626)
141 KOG2106|consensus 99.9 4.6E-19 1E-23 139.5 24.7 197 25-227 285-522 (626)
142 KOG4283|consensus 99.9 1.5E-19 3.2E-24 133.7 19.8 161 25-186 99-279 (397)
143 KOG0642|consensus 99.9 4.1E-20 8.9E-25 146.9 17.7 222 15-238 282-573 (577)
144 KOG1063|consensus 99.9 3E-20 6.5E-25 150.9 16.9 210 17-226 515-763 (764)
145 KOG0270|consensus 99.9 4.3E-20 9.3E-25 142.9 16.6 193 39-233 192-411 (463)
146 KOG2055|consensus 99.9 8.3E-20 1.8E-24 142.1 17.8 198 28-226 304-512 (514)
147 KOG0294|consensus 99.9 3.1E-19 6.7E-24 132.9 19.3 123 64-188 38-162 (362)
148 KOG0307|consensus 99.8 8.7E-21 1.9E-25 161.5 12.2 213 27-239 64-297 (1049)
149 KOG0650|consensus 99.8 1.5E-19 3.3E-24 144.8 18.2 206 20-227 393-681 (733)
150 KOG1034|consensus 99.8 6E-19 1.3E-23 132.1 19.8 202 25-226 87-383 (385)
151 KOG1408|consensus 99.8 1.9E-19 4E-24 147.2 17.2 199 42-240 395-685 (1080)
152 KOG1273|consensus 99.8 2.9E-19 6.2E-24 133.3 16.1 156 72-227 26-227 (405)
153 KOG1063|consensus 99.8 2.4E-19 5.2E-24 145.7 16.8 215 14-228 348-650 (764)
154 KOG2919|consensus 99.8 6.6E-19 1.4E-23 131.7 16.9 206 27-233 104-335 (406)
155 KOG0303|consensus 99.8 5.4E-19 1.2E-23 135.3 15.7 169 64-233 76-257 (472)
156 KOG4328|consensus 99.8 6.1E-19 1.3E-23 137.1 16.1 216 18-233 225-457 (498)
157 KOG1007|consensus 99.8 2.5E-18 5.4E-23 126.9 18.0 205 20-226 115-361 (370)
158 KOG0649|consensus 99.8 5.9E-18 1.3E-22 122.2 19.5 212 29-246 12-257 (325)
159 KOG0321|consensus 99.8 1.1E-18 2.3E-23 140.9 17.3 196 33-228 55-303 (720)
160 KOG1445|consensus 99.8 4.3E-19 9.3E-24 143.4 14.4 210 27-236 627-854 (1012)
161 KOG1009|consensus 99.8 2.5E-18 5.5E-23 131.9 17.9 213 27-239 13-283 (434)
162 KOG1188|consensus 99.8 3.4E-18 7.5E-23 128.6 17.7 198 40-237 41-253 (376)
163 KOG1272|consensus 99.8 1.1E-19 2.3E-24 141.7 9.8 206 28-238 130-335 (545)
164 KOG0321|consensus 99.8 2.2E-18 4.9E-23 139.0 17.4 205 25-229 98-350 (720)
165 KOG0322|consensus 99.8 1.3E-18 2.8E-23 126.8 14.5 203 20-225 7-322 (323)
166 KOG1539|consensus 99.8 6.4E-17 1.4E-21 134.2 25.8 206 37-243 122-339 (910)
167 COG2319 FOG: WD40 repeat [Gene 99.8 5.1E-16 1.1E-20 126.5 30.7 204 28-233 110-321 (466)
168 KOG0307|consensus 99.8 3.1E-19 6.7E-24 152.2 11.9 208 21-229 110-330 (1049)
169 KOG1523|consensus 99.8 1.9E-17 4.2E-22 123.7 19.8 203 26-229 9-239 (361)
170 KOG1009|consensus 99.8 1.4E-17 2.9E-22 128.0 18.3 121 21-141 59-195 (434)
171 PRK01742 tolB translocation pr 99.8 4E-17 8.7E-22 134.4 22.6 194 23-225 199-400 (429)
172 KOG4378|consensus 99.8 1.5E-17 3.3E-22 130.9 18.2 186 22-208 116-305 (673)
173 COG2319 FOG: WD40 repeat [Gene 99.8 9.4E-16 2E-20 124.9 29.8 208 22-230 60-275 (466)
174 KOG0268|consensus 99.8 1.1E-18 2.4E-23 132.2 10.6 168 60-229 57-305 (433)
175 KOG1445|consensus 99.8 7E-18 1.5E-22 136.5 15.6 212 22-233 74-300 (1012)
176 KOG2110|consensus 99.8 5.7E-16 1.2E-20 117.9 24.4 193 30-228 49-250 (391)
177 KOG3881|consensus 99.8 1.9E-16 4E-21 121.3 21.2 200 27-229 105-323 (412)
178 KOG1007|consensus 99.8 2.9E-17 6.4E-22 121.3 15.9 203 23-227 59-290 (370)
179 KOG1034|consensus 99.8 1.4E-16 3E-21 119.6 19.5 169 14-183 24-211 (385)
180 KOG0644|consensus 99.8 7.5E-19 1.6E-23 145.7 8.1 202 23-229 186-471 (1113)
181 KOG1310|consensus 99.8 1.3E-17 2.8E-22 132.8 14.6 221 17-237 40-314 (758)
182 KOG2321|consensus 99.8 1E-16 2.2E-21 128.3 19.2 220 25-245 49-321 (703)
183 KOG2919|consensus 99.8 3.6E-17 7.8E-22 122.6 15.5 186 30-217 161-361 (406)
184 KOG0650|consensus 99.8 2.1E-17 4.6E-22 132.7 14.6 198 25-223 519-732 (733)
185 KOG0649|consensus 99.8 1.8E-15 4E-20 109.5 22.4 198 19-226 54-274 (325)
186 KOG0642|consensus 99.8 9.7E-17 2.1E-21 128.0 17.2 174 14-188 331-566 (577)
187 KOG1538|consensus 99.8 6.1E-16 1.3E-20 126.2 21.7 205 19-227 45-294 (1081)
188 PRK03629 tolB translocation pr 99.7 6E-15 1.3E-19 121.4 27.2 201 25-231 196-411 (429)
189 KOG1538|consensus 99.7 8.9E-16 1.9E-20 125.2 21.3 195 29-226 14-252 (1081)
190 PF08662 eIF2A: Eukaryotic tra 99.7 1.3E-15 2.8E-20 111.7 20.4 149 73-227 9-180 (194)
191 KOG2394|consensus 99.7 8.9E-17 1.9E-21 127.7 14.5 136 27-162 219-383 (636)
192 KOG1240|consensus 99.7 2.3E-15 5.1E-20 129.7 24.1 220 12-231 1033-1278(1431)
193 KOG2110|consensus 99.7 1.5E-14 3.2E-19 110.3 25.7 198 27-227 87-331 (391)
194 PRK05137 tolB translocation pr 99.7 7.7E-15 1.7E-19 121.3 26.6 203 23-231 197-417 (435)
195 KOG0290|consensus 99.7 7.9E-16 1.7E-20 113.9 17.6 192 25-216 148-356 (364)
196 PRK04922 tolB translocation pr 99.7 9.8E-15 2.1E-19 120.5 25.9 202 23-230 199-415 (433)
197 PRK11028 6-phosphogluconolacto 99.7 1.2E-14 2.7E-19 116.0 25.3 196 28-226 80-304 (330)
198 PRK02889 tolB translocation pr 99.7 1.1E-14 2.3E-19 120.0 25.3 198 24-227 192-404 (427)
199 KOG2111|consensus 99.7 2E-14 4.4E-19 107.6 23.2 177 49-229 75-259 (346)
200 KOG1523|consensus 99.7 7.6E-16 1.6E-20 115.3 15.6 191 17-207 45-260 (361)
201 PF08662 eIF2A: Eukaryotic tra 99.7 9.1E-15 2E-19 107.2 20.9 152 31-188 9-183 (194)
202 KOG1188|consensus 99.7 3.8E-16 8.3E-21 117.7 13.4 147 82-228 41-198 (376)
203 KOG1272|consensus 99.7 1.8E-17 3.9E-22 129.4 6.5 190 28-224 171-360 (545)
204 PRK11028 6-phosphogluconolacto 99.7 9.3E-14 2E-18 111.0 27.9 200 26-228 33-260 (330)
205 KOG0322|consensus 99.7 4.3E-16 9.3E-21 113.8 12.2 157 26-182 149-322 (323)
206 KOG2445|consensus 99.7 1.2E-14 2.6E-19 108.4 19.7 170 13-183 45-318 (361)
207 KOG1524|consensus 99.7 9.3E-16 2E-20 122.1 14.7 179 40-225 76-254 (737)
208 KOG1963|consensus 99.7 1.3E-14 2.7E-19 121.4 21.9 204 23-229 12-325 (792)
209 KOG2394|consensus 99.7 1.3E-15 2.7E-20 121.2 14.8 168 37-205 183-383 (636)
210 KOG0771|consensus 99.7 1.1E-15 2.3E-20 118.1 13.8 158 73-231 148-316 (398)
211 KOG1517|consensus 99.7 4.8E-15 1E-19 126.3 16.6 194 32-226 1170-1381(1387)
212 KOG4227|consensus 99.7 2.6E-14 5.5E-19 110.2 17.9 205 23-227 52-275 (609)
213 KOG4497|consensus 99.7 3.8E-15 8.2E-20 112.2 12.8 200 28-239 49-253 (447)
214 TIGR02800 propeller_TolB tol-p 99.6 4.7E-13 1E-17 110.3 26.4 200 25-230 187-401 (417)
215 PRK01742 tolB translocation pr 99.6 3.4E-14 7.4E-19 117.1 19.3 177 48-231 183-366 (429)
216 KOG1587|consensus 99.6 4.3E-14 9.3E-19 117.1 19.7 210 18-227 282-517 (555)
217 KOG2139|consensus 99.6 8.7E-14 1.9E-18 106.1 19.6 192 28-224 99-307 (445)
218 KOG1517|consensus 99.6 3.6E-14 7.8E-19 121.1 19.1 201 28-229 1110-1336(1387)
219 KOG1963|consensus 99.6 1.8E-13 3.9E-18 114.6 22.4 159 25-184 203-376 (792)
220 PRK00178 tolB translocation pr 99.6 1.4E-12 3E-17 107.9 27.8 201 24-230 195-410 (430)
221 PRK01029 tolB translocation pr 99.6 8.3E-13 1.8E-17 108.5 25.5 207 26-235 183-412 (428)
222 PF02239 Cytochrom_D1: Cytochr 99.6 4E-12 8.6E-17 102.2 28.3 195 40-235 6-211 (369)
223 PRK05137 tolB translocation pr 99.6 9.4E-13 2E-17 108.9 25.4 175 50-229 183-369 (435)
224 KOG1587|consensus 99.6 1.3E-13 2.9E-18 114.3 19.7 201 27-228 242-474 (555)
225 KOG1310|consensus 99.6 3.2E-15 6.9E-20 119.4 9.0 168 61-228 42-233 (758)
226 KOG2139|consensus 99.6 3.2E-13 7E-18 103.0 19.0 198 27-227 140-384 (445)
227 PRK02889 tolB translocation pr 99.6 5.5E-13 1.2E-17 109.9 21.3 179 50-233 177-367 (427)
228 PRK04792 tolB translocation pr 99.6 4E-12 8.7E-17 105.3 26.0 199 26-230 216-429 (448)
229 PRK04922 tolB translocation pr 99.6 7.1E-13 1.5E-17 109.5 21.3 179 50-233 185-375 (433)
230 PF02239 Cytochrom_D1: Cytochr 99.6 2E-11 4.4E-16 98.2 28.5 213 21-235 30-356 (369)
231 PRK03629 tolB translocation pr 99.6 5.2E-12 1.1E-16 104.1 25.4 177 50-231 180-368 (429)
232 KOG3881|consensus 99.6 2.7E-13 5.9E-18 104.2 16.4 178 28-207 149-342 (412)
233 KOG2111|consensus 99.6 1.1E-11 2.3E-16 93.3 24.2 155 27-184 94-257 (346)
234 KOG4547|consensus 99.5 5.4E-12 1.2E-16 101.8 21.6 186 36-224 2-218 (541)
235 KOG0974|consensus 99.5 1.1E-12 2.3E-17 111.9 17.1 193 32-227 92-289 (967)
236 TIGR02800 propeller_TolB tol-p 99.5 3E-11 6.5E-16 99.7 25.1 178 50-232 171-360 (417)
237 KOG4227|consensus 99.5 9.4E-13 2E-17 101.7 13.7 167 62-228 49-227 (609)
238 PRK04043 tolB translocation pr 99.5 3E-10 6.5E-15 93.1 27.9 198 29-234 189-408 (419)
239 KOG0644|consensus 99.5 3.4E-14 7.3E-19 118.6 4.3 115 65-183 186-300 (1113)
240 KOG2321|consensus 99.5 5E-12 1.1E-16 101.9 16.3 196 32-230 138-347 (703)
241 KOG1064|consensus 99.5 6.2E-13 1.4E-17 118.9 12.0 193 25-231 2206-2403(2439)
242 PRK00178 tolB translocation pr 99.5 1.7E-10 3.7E-15 95.5 25.1 179 50-233 180-370 (430)
243 KOG1354|consensus 99.5 8.4E-12 1.8E-16 94.9 15.6 209 27-237 25-313 (433)
244 KOG4497|consensus 99.4 1.6E-10 3.5E-15 87.6 21.7 202 24-229 88-394 (447)
245 PF10282 Lactonase: Lactonase, 99.4 3.7E-09 8E-14 84.9 30.5 200 27-227 86-323 (345)
246 PRK04792 tolB translocation pr 99.4 2.5E-10 5.5E-15 94.6 24.0 178 50-232 199-388 (448)
247 TIGR02658 TTQ_MADH_Hv methylam 99.4 3.5E-09 7.6E-14 83.8 29.0 198 34-234 52-338 (352)
248 KOG4190|consensus 99.4 6.9E-13 1.5E-17 106.7 8.2 203 21-228 729-950 (1034)
249 KOG1240|consensus 99.4 4.1E-11 8.8E-16 104.3 18.0 181 58-238 1037-1237(1431)
250 KOG2315|consensus 99.4 6E-10 1.3E-14 89.8 22.9 193 26-227 164-391 (566)
251 KOG1334|consensus 99.4 8.1E-12 1.8E-16 98.8 11.7 211 17-227 132-367 (559)
252 PRK01029 tolB translocation pr 99.4 3.5E-10 7.5E-15 93.2 21.5 178 28-208 231-426 (428)
253 PLN02919 haloacid dehalogenase 99.4 3.2E-09 6.9E-14 96.1 28.9 199 30-230 626-892 (1057)
254 KOG0974|consensus 99.4 1.5E-11 3.3E-16 105.1 13.2 148 34-184 140-289 (967)
255 KOG1334|consensus 99.3 1.8E-11 4E-16 96.9 10.9 207 21-228 226-468 (559)
256 KOG0280|consensus 99.3 9.2E-10 2E-14 82.3 18.8 185 47-231 44-247 (339)
257 PF10282 Lactonase: Lactonase, 99.3 4.4E-08 9.5E-13 78.8 29.8 199 28-226 37-275 (345)
258 KOG1409|consensus 99.3 1.8E-10 3.8E-15 87.8 14.9 211 19-229 16-273 (404)
259 KOG0280|consensus 99.3 1.3E-09 2.8E-14 81.5 18.6 179 27-207 69-264 (339)
260 KOG4547|consensus 99.3 1.5E-09 3.1E-14 88.0 20.2 142 40-183 71-220 (541)
261 COG4946 Uncharacterized protei 99.3 9.7E-09 2.1E-13 81.7 22.4 172 38-215 331-507 (668)
262 KOG1354|consensus 99.2 6.9E-10 1.5E-14 84.7 14.4 200 27-228 84-361 (433)
263 PF08450 SGL: SMP-30/Gluconola 99.2 1.5E-07 3.2E-12 72.1 26.9 198 32-237 4-223 (246)
264 KOG2041|consensus 99.2 3.1E-10 6.7E-15 94.2 12.2 200 14-217 58-279 (1189)
265 PRK04043 tolB translocation pr 99.2 7.2E-08 1.6E-12 79.2 26.1 175 50-232 170-363 (419)
266 COG2706 3-carboxymuconate cycl 99.2 1.4E-07 3.1E-12 72.7 25.6 197 31-228 92-323 (346)
267 KOG1409|consensus 99.2 5.4E-09 1.2E-13 79.8 17.4 158 27-184 68-271 (404)
268 KOG4714|consensus 99.2 4E-10 8.8E-15 82.8 10.8 159 25-184 87-255 (319)
269 KOG1275|consensus 99.2 2.2E-09 4.8E-14 91.3 16.2 178 42-224 150-340 (1118)
270 KOG3914|consensus 99.2 8.6E-10 1.9E-14 85.5 12.4 160 30-191 65-231 (390)
271 COG4946 Uncharacterized protei 99.2 1.2E-07 2.6E-12 75.7 24.1 120 25-145 357-481 (668)
272 PF15492 Nbas_N: Neuroblastoma 99.1 1.5E-07 3.2E-12 70.6 23.1 198 33-232 3-265 (282)
273 PF04762 IKI3: IKI3 family; I 99.1 2.6E-08 5.6E-13 88.9 22.7 195 27-224 120-377 (928)
274 COG2706 3-carboxymuconate cycl 99.1 5E-07 1.1E-11 69.8 25.9 203 26-229 38-277 (346)
275 TIGR02658 TTQ_MADH_Hv methylam 99.1 1.4E-06 3.1E-11 69.3 28.5 187 49-238 27-299 (352)
276 KOG1064|consensus 99.1 1.1E-09 2.4E-14 98.9 12.1 161 68-231 2207-2371(2439)
277 KOG4532|consensus 99.1 1.1E-07 2.3E-12 70.7 20.4 199 31-229 71-285 (344)
278 PF07433 DUF1513: Protein of u 99.1 6.6E-07 1.4E-11 68.9 25.5 201 31-233 8-254 (305)
279 COG5170 CDC55 Serine/threonine 99.1 3.7E-09 8E-14 79.9 13.0 207 27-235 26-319 (460)
280 KOG3914|consensus 99.1 2.3E-09 5.1E-14 83.2 12.0 160 72-233 65-230 (390)
281 PF13360 PQQ_2: PQQ-like domai 99.1 1.7E-07 3.6E-12 71.3 22.3 187 37-231 34-235 (238)
282 PF07433 DUF1513: Protein of u 99.1 2.5E-07 5.4E-12 71.2 22.6 183 34-223 57-282 (305)
283 KOG4532|consensus 99.1 5.9E-08 1.3E-12 72.0 18.4 174 42-215 131-321 (344)
284 PF08450 SGL: SMP-30/Gluconola 99.1 1.7E-06 3.7E-11 66.2 27.3 180 30-215 42-244 (246)
285 KOG4190|consensus 99.1 7.3E-10 1.6E-14 89.7 8.7 168 63-232 729-912 (1034)
286 KOG4714|consensus 99.0 3.6E-09 7.8E-14 77.9 10.7 148 80-227 100-255 (319)
287 COG5354 Uncharacterized protei 99.0 2.9E-07 6.3E-12 74.0 21.5 195 28-228 174-397 (561)
288 KOG1832|consensus 99.0 2.1E-10 4.5E-15 97.3 4.1 190 22-227 1096-1292(1516)
289 PF15492 Nbas_N: Neuroblastoma 99.0 3.8E-07 8.3E-12 68.4 20.5 164 31-195 47-271 (282)
290 PLN02919 haloacid dehalogenase 99.0 2.8E-07 6.1E-12 83.7 22.5 156 31-187 686-892 (1057)
291 PF04762 IKI3: IKI3 family; I 99.0 5.5E-07 1.2E-11 80.6 23.4 198 27-228 75-335 (928)
292 PF00400 WD40: WD domain, G-be 98.9 6.7E-09 1.5E-13 55.2 6.5 38 18-55 2-39 (39)
293 KOG2695|consensus 98.9 6.9E-09 1.5E-13 79.4 8.6 149 85-236 228-386 (425)
294 TIGR03300 assembly_YfgL outer 98.9 2.3E-06 4.9E-11 69.8 23.5 186 38-230 64-263 (377)
295 TIGR03300 assembly_YfgL outer 98.9 3.3E-06 7.1E-11 68.9 24.2 188 40-235 146-347 (377)
296 KOG1912|consensus 98.9 4.1E-07 8.9E-12 76.8 18.7 209 29-239 17-273 (1062)
297 KOG2315|consensus 98.9 6.6E-07 1.4E-11 72.7 18.2 148 32-185 222-392 (566)
298 KOG0882|consensus 98.9 3.3E-08 7.1E-13 78.2 10.6 208 26-235 8-240 (558)
299 KOG2695|consensus 98.8 2.3E-08 5.1E-13 76.5 9.0 156 34-193 218-386 (425)
300 KOG2114|consensus 98.8 1E-06 2.2E-11 75.1 19.1 200 34-235 30-252 (933)
301 KOG1912|consensus 98.8 8.6E-07 1.9E-11 74.9 17.8 205 22-227 50-305 (1062)
302 KOG0309|consensus 98.8 6.9E-08 1.5E-12 80.9 11.4 214 10-226 8-232 (1081)
303 PF00400 WD40: WD domain, G-be 98.8 2.3E-08 4.9E-13 53.1 5.8 38 144-181 2-39 (39)
304 KOG2041|consensus 98.8 4.2E-08 9.2E-13 81.9 9.7 157 69-227 14-187 (1189)
305 KOG0309|consensus 98.8 1.5E-07 3.2E-12 78.9 11.7 207 19-226 106-339 (1081)
306 KOG0882|consensus 98.8 3.2E-07 6.9E-12 72.8 12.9 212 25-237 51-316 (558)
307 PF13360 PQQ_2: PQQ-like domai 98.7 6.7E-06 1.4E-10 62.5 19.6 179 48-231 2-196 (238)
308 KOG1920|consensus 98.7 1.1E-05 2.3E-10 71.6 21.2 198 28-228 69-324 (1265)
309 KOG1920|consensus 98.7 6.9E-06 1.5E-10 72.7 20.0 159 27-186 109-325 (1265)
310 PF11768 DUF3312: Protein of u 98.7 7.1E-07 1.5E-11 73.3 13.2 76 110-187 258-333 (545)
311 KOG2066|consensus 98.7 8.1E-06 1.8E-10 69.4 19.6 154 22-183 53-233 (846)
312 KOG2314|consensus 98.7 3.1E-06 6.8E-11 69.0 16.4 178 31-213 214-410 (698)
313 COG0823 TolB Periplasmic compo 98.7 3.5E-06 7.6E-11 69.1 17.0 185 27-216 192-389 (425)
314 KOG2314|consensus 98.6 6.9E-06 1.5E-10 67.1 17.8 195 32-227 310-526 (698)
315 COG3391 Uncharacterized conser 98.6 0.00022 4.8E-09 58.2 27.1 202 31-235 77-292 (381)
316 KOG2066|consensus 98.6 2E-05 4.2E-10 67.1 18.7 183 27-226 39-233 (846)
317 KOG1275|consensus 98.6 1.2E-06 2.7E-11 75.2 11.8 142 37-181 185-340 (1118)
318 COG5170 CDC55 Serine/threonine 98.5 2.9E-06 6.2E-11 64.6 12.0 196 28-225 86-366 (460)
319 PF04841 Vps16_N: Vps16, N-ter 98.5 0.00026 5.7E-09 58.3 24.3 178 50-237 62-257 (410)
320 KOG1008|consensus 98.5 3.9E-08 8.5E-13 81.0 2.0 199 27-227 56-276 (783)
321 KOG1645|consensus 98.5 7.7E-06 1.7E-10 64.3 14.2 212 23-237 189-430 (463)
322 COG0823 TolB Periplasmic compo 98.5 3.1E-05 6.6E-10 63.7 18.4 165 59-227 182-359 (425)
323 COG5354 Uncharacterized protei 98.5 5.7E-05 1.2E-09 61.2 19.0 198 27-228 71-308 (561)
324 PRK11138 outer membrane biogen 98.5 8.4E-05 1.8E-09 61.1 21.0 189 41-235 162-362 (394)
325 KOG1645|consensus 98.5 2.2E-06 4.8E-11 67.2 10.5 94 51-145 175-270 (463)
326 PF11768 DUF3312: Protein of u 98.5 3.1E-06 6.8E-11 69.6 11.3 75 25-101 257-331 (545)
327 KOG4649|consensus 98.5 0.00027 5.8E-09 53.0 21.2 142 39-183 23-165 (354)
328 PF06977 SdiA-regulated: SdiA- 98.4 0.00034 7.4E-09 53.2 25.6 199 22-223 16-247 (248)
329 PRK11138 outer membrane biogen 98.4 8.2E-05 1.8E-09 61.1 19.2 191 38-231 68-279 (394)
330 KOG2114|consensus 98.4 3.7E-05 8E-10 66.0 15.7 156 76-232 30-207 (933)
331 PRK02888 nitrous-oxide reducta 98.3 0.00019 4.2E-09 60.7 19.3 185 33-227 198-405 (635)
332 KOG3617|consensus 98.3 8.9E-06 1.9E-10 69.8 11.5 186 33-229 21-223 (1416)
333 KOG4640|consensus 98.3 3.9E-06 8.5E-11 69.4 8.9 93 113-206 22-115 (665)
334 KOG3617|consensus 98.3 2.7E-05 5.8E-10 67.0 13.1 70 30-99 62-131 (1416)
335 PF00930 DPPIV_N: Dipeptidyl p 98.3 0.00013 2.7E-09 59.1 16.8 193 36-230 1-272 (353)
336 PF04053 Coatomer_WDAD: Coatom 98.3 0.00071 1.5E-08 56.0 21.0 146 22-182 27-172 (443)
337 KOG3621|consensus 98.3 5.4E-05 1.2E-09 63.7 14.4 117 26-142 32-155 (726)
338 PF08553 VID27: VID27 cytoplas 98.2 0.00011 2.5E-09 64.1 16.4 140 81-225 493-646 (794)
339 PRK02888 nitrous-oxide reducta 98.2 0.00085 1.8E-08 57.0 20.1 122 49-172 296-450 (635)
340 cd00216 PQQ_DH Dehydrogenases 98.2 0.0014 3.1E-08 55.4 21.7 193 39-233 61-326 (488)
341 PRK13616 lipoprotein LpqB; Pro 98.2 0.00062 1.3E-08 58.5 19.0 186 28-222 350-564 (591)
342 KOG1832|consensus 98.2 1.7E-06 3.6E-11 74.4 3.5 134 104-242 1094-1230(1516)
343 PF06433 Me-amine-dh_H: Methyl 98.1 0.0027 5.9E-08 50.1 21.5 206 32-243 99-337 (342)
344 PF02897 Peptidase_S9_N: Proly 98.1 0.0043 9.2E-08 51.4 26.2 199 30-230 126-362 (414)
345 KOG4640|consensus 98.1 3.9E-05 8.6E-10 63.7 9.7 94 69-163 20-115 (665)
346 COG3490 Uncharacterized protei 98.1 0.0016 3.4E-08 49.7 17.3 189 34-227 120-349 (366)
347 PF06977 SdiA-regulated: SdiA- 98.1 0.0027 5.9E-08 48.4 19.8 169 64-234 16-208 (248)
348 cd00216 PQQ_DH Dehydrogenases 98.0 0.0058 1.3E-07 51.8 22.7 184 48-236 174-434 (488)
349 COG3391 Uncharacterized conser 98.0 0.0049 1.1E-07 50.5 25.2 200 29-231 32-244 (381)
350 KOG4649|consensus 98.0 0.0029 6.2E-08 47.7 20.2 102 39-141 63-165 (354)
351 PRK13616 lipoprotein LpqB; Pro 98.0 0.00091 2E-08 57.5 17.6 147 70-224 350-523 (591)
352 PF04053 Coatomer_WDAD: Coatom 98.0 0.0024 5.1E-08 53.0 19.2 144 67-226 30-173 (443)
353 KOG3621|consensus 97.9 9.3E-05 2E-09 62.3 9.6 108 76-184 40-155 (726)
354 smart00320 WD40 WD40 repeats. 97.9 6.6E-05 1.4E-09 38.5 6.1 36 20-55 5-40 (40)
355 PF03178 CPSF_A: CPSF A subuni 97.9 0.0054 1.2E-07 49.0 19.4 172 50-226 3-202 (321)
356 KOG1008|consensus 97.9 3E-06 6.6E-11 70.3 0.2 162 21-184 96-276 (783)
357 PF08596 Lgl_C: Lethal giant l 97.8 0.011 2.5E-07 48.3 23.8 207 29-237 3-301 (395)
358 smart00320 WD40 WD40 repeats. 97.8 0.00013 2.8E-09 37.3 5.8 38 144-181 3-40 (40)
359 KOG2395|consensus 97.8 0.0014 3E-08 54.0 13.5 144 79-226 343-500 (644)
360 PF08553 VID27: VID27 cytoplas 97.7 0.0028 6.1E-08 55.8 15.8 132 47-182 502-646 (794)
361 PF14583 Pectate_lyase22: Olig 97.7 0.015 3.3E-07 46.8 21.9 205 33-238 41-284 (386)
362 COG3386 Gluconolactonase [Carb 97.7 0.014 3E-07 46.1 22.1 182 29-215 67-274 (307)
363 PF04841 Vps16_N: Vps16, N-ter 97.7 0.021 4.5E-07 47.3 24.7 172 28-207 81-270 (410)
364 PF08596 Lgl_C: Lethal giant l 97.7 0.022 4.8E-07 46.7 19.6 209 17-226 76-338 (395)
365 PF14783 BBS2_Mid: Ciliary BBS 97.7 0.0058 1.3E-07 40.0 15.1 100 72-178 2-109 (111)
366 PHA02713 hypothetical protein; 97.7 0.0038 8.2E-08 53.7 15.5 144 80-229 351-536 (557)
367 PF03178 CPSF_A: CPSF A subuni 97.6 0.021 4.5E-07 45.6 21.4 180 39-223 42-262 (321)
368 COG3204 Uncharacterized protei 97.6 0.017 3.6E-07 44.5 18.2 161 65-225 81-262 (316)
369 PF05694 SBP56: 56kDa selenium 97.6 0.025 5.5E-07 46.2 21.9 197 38-234 86-351 (461)
370 TIGR03074 PQQ_membr_DH membran 97.6 0.044 9.6E-07 48.8 24.9 195 39-234 194-485 (764)
371 COG3386 Gluconolactonase [Carb 97.6 0.023 5E-07 44.9 22.9 201 32-238 29-254 (307)
372 COG3490 Uncharacterized protei 97.6 0.02 4.3E-07 43.9 18.6 202 32-233 72-317 (366)
373 PF00930 DPPIV_N: Dipeptidyl p 97.6 0.028 6E-07 45.6 20.1 186 27-215 42-299 (353)
374 PF14783 BBS2_Mid: Ciliary BBS 97.6 0.0088 1.9E-07 39.1 14.4 92 124-222 16-110 (111)
375 PF00780 CNH: CNH domain; Int 97.6 0.024 5.2E-07 44.1 23.5 141 37-185 5-167 (275)
376 PF14870 PSII_BNR: Photosynthe 97.5 0.021 4.6E-07 44.9 16.7 150 27-180 144-301 (302)
377 PF14870 PSII_BNR: Photosynthe 97.5 0.029 6.2E-07 44.2 22.9 157 63-223 138-301 (302)
378 TIGR03075 PQQ_enz_alc_DH PQQ-d 97.5 0.049 1.1E-06 46.6 23.5 191 39-231 69-338 (527)
379 KOG2079|consensus 97.4 0.0012 2.5E-08 58.7 9.1 101 122-224 98-201 (1206)
380 PF05096 Glu_cyclase_2: Glutam 97.4 0.035 7.6E-07 42.4 23.6 184 27-215 44-249 (264)
381 PHA03098 kelch-like protein; P 97.4 0.031 6.8E-07 48.0 17.7 146 80-229 342-514 (534)
382 KOG2444|consensus 97.4 0.00035 7.6E-09 51.3 4.8 106 122-227 69-178 (238)
383 KOG2395|consensus 97.3 0.0091 2E-07 49.4 12.0 142 38-182 344-499 (644)
384 COG3204 Uncharacterized protei 97.2 0.065 1.4E-06 41.4 20.2 160 25-184 83-264 (316)
385 KOG4499|consensus 97.2 0.054 1.2E-06 40.5 14.0 98 73-170 161-271 (310)
386 TIGR03075 PQQ_enz_alc_DH PQQ-d 97.2 0.13 2.8E-06 44.1 25.5 189 48-238 180-502 (527)
387 PF06433 Me-amine-dh_H: Methyl 97.1 0.09 1.9E-06 41.8 21.7 177 49-230 17-217 (342)
388 PF12894 Apc4_WD40: Anaphase-p 97.1 0.0027 5.9E-08 34.7 5.5 30 153-182 11-40 (47)
389 PF10647 Gmad1: Lipoprotein Lp 97.1 0.084 1.8E-06 40.7 18.0 145 71-218 25-187 (253)
390 PF15390 DUF4613: Domain of un 97.1 0.065 1.4E-06 45.3 15.1 149 28-184 20-187 (671)
391 PF12894 Apc4_WD40: Anaphase-p 97.0 0.0031 6.6E-08 34.5 5.2 30 27-56 11-40 (47)
392 KOG2280|consensus 97.0 0.088 1.9E-06 45.7 15.9 200 28-235 44-255 (829)
393 KOG4441|consensus 97.0 0.083 1.8E-06 45.7 16.1 189 38-231 284-504 (571)
394 KOG4441|consensus 97.0 0.071 1.5E-06 46.1 15.7 182 39-228 333-548 (571)
395 KOG2079|consensus 97.0 0.0017 3.8E-08 57.7 5.7 78 164-241 98-175 (1206)
396 PHA02790 Kelch-like protein; P 96.9 0.18 3.8E-06 42.8 17.2 180 39-227 272-471 (480)
397 PF14583 Pectate_lyase22: Olig 96.9 0.17 3.8E-06 40.9 16.3 161 55-217 16-208 (386)
398 PF15390 DUF4613: Domain of un 96.8 0.092 2E-06 44.4 14.4 152 70-229 20-189 (671)
399 KOG2444|consensus 96.8 0.0064 1.4E-07 44.9 7.0 105 80-184 69-178 (238)
400 PF14655 RAB3GAP2_N: Rab3 GTPa 96.8 0.047 1E-06 44.9 12.6 94 16-109 296-408 (415)
401 PHA02713 hypothetical protein; 96.8 0.029 6.4E-07 48.4 11.9 95 92-188 433-538 (557)
402 PRK10115 protease 2; Provision 96.7 0.39 8.5E-06 42.7 25.2 193 29-226 128-346 (686)
403 PF00780 CNH: CNH domain; Int 96.7 0.19 4.2E-06 39.0 17.9 148 79-234 5-173 (275)
404 COG4257 Vgb Streptogramin lyas 96.7 0.18 4E-06 38.7 20.6 205 28-237 62-272 (353)
405 KOG3630|consensus 96.6 0.052 1.1E-06 49.2 12.0 142 70-213 101-260 (1405)
406 TIGR02604 Piru_Ver_Nterm putat 96.6 0.31 6.8E-06 39.8 16.9 142 28-172 14-202 (367)
407 PF10647 Gmad1: Lipoprotein Lp 96.6 0.23 5E-06 38.2 20.5 144 29-175 25-187 (253)
408 TIGR02604 Piru_Ver_Nterm putat 96.6 0.32 6.9E-06 39.7 16.9 140 71-215 15-202 (367)
409 PRK13684 Ycf48-like protein; P 96.5 0.35 7.6E-06 38.9 17.3 149 28-181 173-329 (334)
410 COG5167 VID27 Protein involved 96.4 0.25 5.5E-06 41.3 13.9 142 37-183 477-632 (776)
411 PRK13684 Ycf48-like protein; P 96.4 0.39 8.6E-06 38.6 20.2 152 69-226 172-331 (334)
412 PF12234 Rav1p_C: RAVE protein 96.2 0.52 1.1E-05 41.0 15.4 127 13-141 15-156 (631)
413 PF12234 Rav1p_C: RAVE protein 96.1 0.83 1.8E-05 39.8 16.7 109 72-182 32-155 (631)
414 PF10313 DUF2415: Uncharacteri 96.0 0.059 1.3E-06 28.7 5.6 32 154-185 1-35 (43)
415 PRK10115 protease 2; Provision 95.9 1.2 2.6E-05 39.7 16.9 111 114-226 129-255 (686)
416 PHA03098 kelch-like protein; P 95.9 0.29 6.2E-06 42.2 12.9 106 80-187 389-515 (534)
417 PF05694 SBP56: 56kDa selenium 95.8 0.86 1.9E-05 37.6 20.0 180 36-215 138-392 (461)
418 KOG3630|consensus 95.8 0.14 2.9E-06 46.7 10.5 132 113-245 102-247 (1405)
419 PF10168 Nup88: Nuclear pore c 95.8 0.78 1.7E-05 40.9 15.3 28 112-140 85-112 (717)
420 COG5167 VID27 Protein involved 95.8 0.79 1.7E-05 38.5 14.1 145 78-227 476-633 (776)
421 KOG4499|consensus 95.8 0.59 1.3E-05 35.2 18.9 142 70-214 109-272 (310)
422 KOG1983|consensus 95.7 1.1 2.3E-05 41.7 16.1 31 28-58 36-66 (993)
423 PF10313 DUF2415: Uncharacteri 95.7 0.065 1.4E-06 28.5 5.1 30 198-227 2-34 (43)
424 KOG1916|consensus 95.6 0.012 2.6E-07 51.8 3.5 115 23-140 128-264 (1283)
425 KOG4460|consensus 95.5 0.84 1.8E-05 38.4 13.2 29 199-227 168-199 (741)
426 TIGR03074 PQQ_membr_DH membran 95.5 1.9 4E-05 38.9 19.2 150 39-189 260-483 (764)
427 PF14655 RAB3GAP2_N: Rab3 GTPa 95.2 0.59 1.3E-05 38.6 11.7 83 155-237 309-409 (415)
428 PF10168 Nup88: Nuclear pore c 95.1 1.6 3.4E-05 39.0 14.8 72 70-141 85-179 (717)
429 PF07569 Hira: TUP1-like enhan 95.0 0.34 7.4E-06 36.4 9.2 68 161-229 18-98 (219)
430 PHA02790 Kelch-like protein; P 94.9 1.3 2.9E-05 37.6 13.6 102 80-186 362-473 (480)
431 PF02897 Peptidase_S9_N: Proly 94.9 1.8 4E-05 35.9 24.3 197 32-231 174-409 (414)
432 KOG2280|consensus 94.8 2.7 5.9E-05 37.1 14.6 161 27-191 83-254 (829)
433 KOG2247|consensus 94.6 0.0039 8.5E-08 51.0 -2.2 139 27-168 34-174 (615)
434 TIGR02276 beta_rpt_yvtn 40-res 94.2 0.37 8.1E-06 25.2 5.8 39 206-244 1-40 (42)
435 COG3823 Glutamine cyclotransfe 94.0 1.8 4E-05 32.0 12.7 104 38-144 55-161 (262)
436 TIGR03118 PEPCTERM_chp_1 conse 94.0 2.5 5.3E-05 33.3 13.8 115 114-228 25-172 (336)
437 KOG1897|consensus 93.3 6.5 0.00014 36.0 20.3 192 28-223 775-1001(1096)
438 PF07250 Glyoxal_oxid_N: Glyox 93.2 2.1 4.6E-05 32.7 10.2 138 52-191 49-205 (243)
439 PLN00033 photosystem II stabil 92.8 4.8 0.0001 33.3 17.7 146 30-180 241-396 (398)
440 PF12657 TFIIIC_delta: Transcr 92.8 1.8 3.8E-05 31.2 9.1 30 197-226 86-121 (173)
441 PF07569 Hira: TUP1-like enhan 92.5 1.3 2.9E-05 33.3 8.3 66 35-101 18-97 (219)
442 PF12657 TFIIIC_delta: Transcr 92.5 1.9 4.1E-05 31.0 8.9 30 155-184 87-122 (173)
443 KOG1916|consensus 92.3 0.16 3.4E-06 45.3 3.5 112 34-146 190-328 (1283)
444 COG4590 ABC-type uncharacteriz 92.3 0.78 1.7E-05 38.0 7.2 159 26-187 219-390 (733)
445 COG1520 FOG: WD40-like repeat 92.3 5.5 0.00012 32.6 15.3 105 82-188 69-176 (370)
446 PF05096 Glu_cyclase_2: Glutam 92.1 4.5 9.7E-05 31.3 19.1 158 72-234 47-211 (264)
447 KOG2377|consensus 92.0 6.4 0.00014 32.9 13.9 127 111-239 66-202 (657)
448 PF08728 CRT10: CRT10; InterP 91.9 8.7 0.00019 34.2 15.9 142 39-182 49-245 (717)
449 KOG1900|consensus 91.8 6.7 0.00015 37.0 13.0 136 46-184 96-273 (1311)
450 COG1520 FOG: WD40-like repeat 91.7 6.4 0.00014 32.2 20.5 192 41-236 70-278 (370)
451 KOG2247|consensus 91.5 0.029 6.2E-07 46.2 -1.6 136 73-211 38-174 (615)
452 PF11715 Nup160: Nucleoporin N 91.3 1.8 4E-05 37.4 9.0 38 198-235 216-257 (547)
453 TIGR03118 PEPCTERM_chp_1 conse 91.0 6.5 0.00014 31.1 23.3 198 30-229 25-282 (336)
454 PF08728 CRT10: CRT10; InterP 90.8 5.2 0.00011 35.6 11.0 104 122-226 113-246 (717)
455 PF13449 Phytase-like: Esteras 90.7 7.5 0.00016 31.2 17.4 143 70-213 20-231 (326)
456 PF11715 Nup160: Nucleoporin N 90.7 3.5 7.5E-05 35.8 10.2 36 72-107 217-256 (547)
457 COG4590 ABC-type uncharacteriz 90.4 1.4 3E-05 36.6 6.9 161 69-233 220-393 (733)
458 PLN02153 epithiospecifier prot 90.2 8.6 0.00019 31.0 19.4 147 80-228 85-286 (341)
459 PF07250 Glyoxal_oxid_N: Glyox 90.0 7.2 0.00016 29.9 12.7 134 93-230 48-201 (243)
460 TIGR03548 mutarot_permut cycli 89.9 8.8 0.00019 30.7 18.3 64 80-144 123-197 (323)
461 PLN02193 nitrile-specifier pro 89.6 12 0.00026 31.9 19.5 146 80-228 228-412 (470)
462 COG5276 Uncharacterized conser 89.3 9.2 0.0002 30.1 19.5 151 28-185 87-243 (370)
463 PF08801 Nucleoporin_N: Nup133 89.2 12 0.00026 31.3 17.9 31 198-228 191-221 (422)
464 PLN00033 photosystem II stabil 89.1 12 0.00026 31.1 22.6 144 73-223 242-396 (398)
465 KOG1900|consensus 89.1 20 0.00044 34.1 13.6 139 88-227 96-273 (1311)
466 COG5276 Uncharacterized conser 88.8 10 0.00022 29.9 21.1 150 71-228 88-243 (370)
467 TIGR03548 mutarot_permut cycli 88.4 11 0.00025 30.0 18.7 106 80-187 72-198 (323)
468 PF12768 Rax2: Cortical protei 88.2 11 0.00024 29.6 11.6 95 49-144 16-126 (281)
469 KOG2377|consensus 87.8 15 0.00033 30.8 14.7 135 31-168 26-168 (657)
470 PRK14131 N-acetylneuraminic ac 87.8 14 0.0003 30.3 16.8 12 92-103 190-201 (376)
471 TIGR03547 muta_rot_YjhT mutatr 87.5 14 0.0003 29.9 17.0 12 91-102 168-179 (346)
472 PF07995 GSDH: Glucose / Sorbo 87.4 14 0.0003 29.8 15.2 102 29-132 3-134 (331)
473 TIGR03606 non_repeat_PQQ dehyd 86.8 18 0.00039 30.6 15.6 55 111-165 29-90 (454)
474 PLN02153 epithiospecifier prot 86.8 15 0.00032 29.7 17.7 54 133-187 217-288 (341)
475 TIGR02276 beta_rpt_yvtn 40-res 86.5 3.1 6.7E-05 21.5 6.3 31 37-67 1-32 (42)
476 PF12768 Rax2: Cortical protei 86.4 14 0.00031 29.0 15.8 146 90-236 15-196 (281)
477 PF14761 HPS3_N: Hermansky-Pud 86.0 7.1 0.00015 29.1 7.6 75 136-213 1-76 (215)
478 PF05935 Arylsulfotrans: Aryls 85.8 21 0.00046 30.5 20.4 138 49-191 128-309 (477)
479 PF03022 MRJP: Major royal jel 85.5 16 0.00035 28.8 17.7 166 71-237 2-230 (287)
480 PF01731 Arylesterase: Arylest 84.7 7.4 0.00016 24.4 6.3 27 200-226 57-84 (86)
481 smart00564 PQQ beta-propeller 83.9 3.4 7.4E-05 20.0 3.9 24 125-148 8-31 (33)
482 COG5290 IkappaB kinase complex 83.5 35 0.00076 31.0 12.6 92 115-209 250-349 (1243)
483 PF13449 Phytase-like: Esteras 83.3 22 0.00048 28.6 17.0 143 27-170 19-231 (326)
484 PF07995 GSDH: Glucose / Sorbo 81.7 26 0.00056 28.3 18.1 100 72-173 4-133 (331)
485 PF01011 PQQ: PQQ enzyme repea 80.7 5.9 0.00013 20.2 4.1 28 125-152 2-29 (38)
486 KOG3616|consensus 80.4 4.8 0.0001 35.8 5.6 69 153-225 14-82 (1636)
487 PF03088 Str_synth: Strictosid 80.2 12 0.00027 23.6 7.2 47 173-221 35-82 (89)
488 PF05935 Arylsulfotrans: Aryls 79.8 38 0.00082 29.0 15.7 146 90-240 127-315 (477)
489 PF07676 PD40: WD40-like Beta 79.7 6.3 0.00014 20.0 5.4 29 110-138 7-38 (39)
490 TIGR02171 Fb_sc_TIGR02171 Fibr 79.3 21 0.00045 32.8 9.2 86 125-211 320-413 (912)
491 PF10395 Utp8: Utp8 family; I 79.1 47 0.001 29.6 22.1 153 69-227 129-306 (670)
492 COG1770 PtrB Protease II [Amin 78.6 47 0.001 29.4 14.1 127 114-242 131-274 (682)
493 COG5308 NUP170 Nuclear pore co 77.5 46 0.00099 30.7 10.5 71 112-184 182-276 (1263)
494 TIGR02171 Fb_sc_TIGR02171 Fibr 77.0 33 0.00072 31.6 9.7 78 90-167 328-412 (912)
495 PLN02193 nitrile-specifier pro 75.8 50 0.0011 28.2 18.7 106 80-188 278-415 (470)
496 KOG3522|consensus 75.3 63 0.0014 29.5 10.8 134 42-184 550-698 (925)
497 KOG2006|consensus 75.0 12 0.00027 34.4 6.7 69 32-100 153-226 (1023)
498 PF02333 Phytase: Phytase; In 74.5 48 0.001 27.4 21.1 186 38-228 67-292 (381)
499 PF13570 PQQ_3: PQQ-like domai 74.4 7.8 0.00017 19.9 3.5 20 208-227 21-40 (40)
500 PF11635 Med16: Mediator compl 73.2 75 0.0016 29.1 18.6 67 155-221 261-345 (753)
No 1
>KOG0272|consensus
Probab=100.00 E-value=4.1e-41 Score=256.65 Aligned_cols=223 Identities=32% Similarity=0.559 Sum_probs=206.1
Q ss_pred CceEEEEEecCCCCeEEEEECCC--CCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeE
Q psy4393 16 NYVLKFTLAGHTKAVSSVKFSPN--GEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTL 93 (247)
Q Consensus 16 ~~~~~~~~~~h~~~v~~~~~s~~--~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 93 (247)
+..+..++.+|+..|.++.|+|. +.-+|+|+.||.+++|+..+...+..+.+|...|..++|+|+|++|+|++-|.+-
T Consensus 206 ~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e~~l~~l~gH~~RVs~VafHPsG~~L~TasfD~tW 285 (459)
T KOG0272|consen 206 QCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQETPLQDLEGHLARVSRVAFHPSGKFLGTASFDSTW 285 (459)
T ss_pred CcceeEEEeccccceeeEEEccCCCccceeeeccCCceeeeccCCCcchhhhhcchhhheeeeecCCCceeeecccccch
Confidence 34567788999999999999996 5689999999999999999888889999999999999999999999999999999
Q ss_pred EEEECCCceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecC
Q psy4393 94 KIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY 173 (247)
Q Consensus 94 ~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 173 (247)
++||+.++..+....+|...|.+++|.|+|.++++|+-|..-+|||+|+++++..+.+|..+|.+|.|+|+|..||+|+.
T Consensus 286 RlWD~~tk~ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~RvWDlRtgr~im~L~gH~k~I~~V~fsPNGy~lATgs~ 365 (459)
T KOG0272|consen 286 RLWDLETKSELLLQEGHSKGVFSIAFQPDGSLAATGGLDSLGRVWDLRTGRCIMFLAGHIKEILSVAFSPNGYHLATGSS 365 (459)
T ss_pred hhcccccchhhHhhcccccccceeEecCCCceeeccCccchhheeecccCcEEEEecccccceeeEeECCCceEEeecCC
Confidence 99999999988888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEeCCCceeeeeeccCCCCCeEEEEECC-CCCEEEEEEcCCeEEEEECCCcceEEEEccCCc
Q psy4393 174 DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP-NGKYILAATLDNTLKLWDSKVVTPAIICSTPLN 239 (247)
Q Consensus 174 dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~ 239 (247)
|++++|||++..+.+..+ ..|..-|+.+.|+| .|.+|++++.|++++||..++..|+.+++++-+
T Consensus 366 Dnt~kVWDLR~r~~ly~i-pAH~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~~~~~~ksLaGHe~ 431 (459)
T KOG0272|consen 366 DNTCKVWDLRMRSELYTI-PAHSNLVSQVKYSPQEGYFLVTASYDNTVKIWSTRTWSPLKSLAGHEG 431 (459)
T ss_pred CCcEEEeeecccccceec-ccccchhhheEecccCCeEEEEcccCcceeeecCCCcccchhhcCCcc
Confidence 999999999988775543 45667789999998 789999999999999999999999888777543
No 2
>KOG0263|consensus
Probab=100.00 E-value=1.5e-39 Score=264.68 Aligned_cols=209 Identities=32% Similarity=0.590 Sum_probs=199.1
Q ss_pred EEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEEC
Q psy4393 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWEL 98 (247)
Q Consensus 19 ~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~ 98 (247)
...++.||.++|.++.|+|+.++|++|++|+++++|.+.+.......++|..+|.++.|+|-|-++++++.|++-++|..
T Consensus 443 ~~~~L~GH~GPVyg~sFsPd~rfLlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~GyYFatas~D~tArLWs~ 522 (707)
T KOG0263|consen 443 TSRTLYGHSGPVYGCSFSPDRRFLLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRGYYFATASHDQTARLWST 522 (707)
T ss_pred eeEEeecCCCceeeeeecccccceeeccCCcceeeeecccceeEEEecCCCcceeeEEecCCceEEEecCCCceeeeeec
Confidence 45668899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCCCeEE
Q psy4393 99 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCR 178 (247)
Q Consensus 99 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~ 178 (247)
....+.+.+.+|-+.|.|+.|+|+.+++++|+.|.++++||..+|..++.|.+|.++|.+++|+|+|++|++|+.||.|.
T Consensus 523 d~~~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~ 602 (707)
T KOG0263|consen 523 DHNKPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSPCGRYLASGDEDGLIK 602 (707)
T ss_pred ccCCchhhhcccccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEecCCCCceEEEEEcCCCceEeecccCCcEE
Confidence 99889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCc
Q psy4393 179 IWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVV 228 (247)
Q Consensus 179 v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~ 228 (247)
+||+.+++.+..+..+ ...|..+.|+.||..||+|+.|+.|++||....
T Consensus 603 iWDl~~~~~v~~l~~H-t~ti~SlsFS~dg~vLasgg~DnsV~lWD~~~~ 651 (707)
T KOG0263|consen 603 IWDLANGSLVKQLKGH-TGTIYSLSFSRDGNVLASGGADNSVRLWDLTKV 651 (707)
T ss_pred EEEcCCCcchhhhhcc-cCceeEEEEecCCCEEEecCCCCeEEEEEchhh
Confidence 9999999888776655 788999999999999999999999999997654
No 3
>KOG0271|consensus
Probab=100.00 E-value=2.8e-39 Score=244.23 Aligned_cols=227 Identities=33% Similarity=0.603 Sum_probs=197.6
Q ss_pred ceEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEE
Q psy4393 17 YVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIW 96 (247)
Q Consensus 17 ~~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~ 96 (247)
.....++.||.++|.|+.|+|+|..|++|+.|.++++||..+.......++|..-|.+++|+|||+.|++|+.||.|++|
T Consensus 105 trCssS~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lw 184 (480)
T KOG0271|consen 105 TRCSSSIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLW 184 (480)
T ss_pred ceeccccCCCCCcEEEEEecCCCceEEecCCCceEEeeccCCCCcceeecCCccEEEEEEECCCcchhhccccCCeEEEe
Confidence 33444577999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ECCCceE-EEEEecCCccEEEEEEcC-----CCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEE
Q psy4393 97 ELSSGKC-LKTLKGHSNYVFCCNFNP-----QSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVS 170 (247)
Q Consensus 97 d~~~~~~-~~~~~~~~~~v~~~~~~~-----~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 170 (247)
|.++++. ...+++|...|.+++|.| ...++++++.||.++|||+..++++..+.+|..+|+|++|-.+| ++++
T Consensus 185 dpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~lsgHT~~VTCvrwGG~g-liyS 263 (480)
T KOG0271|consen 185 DPKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTLSGHTASVTCVRWGGEG-LIYS 263 (480)
T ss_pred cCCCCCcccccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEeccCccceEEEEEcCCc-eEEe
Confidence 9998764 467899999999999976 56799999999999999999999999999999999999997554 7899
Q ss_pred ecCCCeEEEEeCCCceeeeee-----------------------------------------------------------
Q psy4393 171 SSYDGLCRIWDTASGQCLKTL----------------------------------------------------------- 191 (247)
Q Consensus 171 ~~~dg~i~v~d~~~~~~~~~~----------------------------------------------------------- 191 (247)
|+.|++|++|+...|.+.+.+
T Consensus 264 gS~DrtIkvw~a~dG~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgs 343 (480)
T KOG0271|consen 264 GSQDRTIKVWRALDGKLCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGS 343 (480)
T ss_pred cCCCceEEEEEccchhHHHhhcccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEec
Confidence 999999999987764211100
Q ss_pred -------------------ccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcceEEEEccCCccccee
Q psy4393 192 -------------------IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTPLNLNYFY 244 (247)
Q Consensus 192 -------------------~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~ 244 (247)
...|...|+.+.||||++++|+++-|..|++||.++++.+-+++.+..+.|=+
T Consensus 344 Dd~tlflW~p~~~kkpi~rmtgHq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~tGk~lasfRGHv~~VYqv 415 (480)
T KOG0271|consen 344 DDFTLFLWNPFKSKKPITRMTGHQALVNHVSFSPDGRYIASASFDKSVKLWDGRTGKFLASFRGHVAAVYQV 415 (480)
T ss_pred CCceEEEecccccccchhhhhchhhheeeEEECCCccEEEEeecccceeeeeCCCcchhhhhhhccceeEEE
Confidence 11233447889999999999999999999999999999998988888776643
No 4
>KOG0272|consensus
Probab=100.00 E-value=3.9e-39 Score=245.83 Aligned_cols=216 Identities=31% Similarity=0.532 Sum_probs=201.4
Q ss_pred ecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCC--CCEEEEEcCCCeEEEEECCCc
Q psy4393 24 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD--SRLLVSGSDDKTLKIWELSSG 101 (247)
Q Consensus 24 ~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~v~d~~~~ 101 (247)
-+..++|..+.|+++++.|++|+.+|.+++|...+......+.+|...+.++.|+|. +..+++++.||++++|++.+.
T Consensus 172 ~gd~rPis~~~fS~ds~~laT~swsG~~kvW~~~~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e 251 (459)
T KOG0272|consen 172 VGDTRPISGCSFSRDSKHLATGSWSGLVKVWSVPQCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQE 251 (459)
T ss_pred ccCCCcceeeEeecCCCeEEEeecCCceeEeecCCcceeEEEeccccceeeEEEccCCCccceeeeccCCceeeeccCCC
Confidence 366899999999999999999999999999999999999999999999999999996 568999999999999999998
Q ss_pred eEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCCCeEEEEe
Q psy4393 102 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181 (247)
Q Consensus 102 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d 181 (247)
..+..+.+|...|..++|+|+|++|+|++.|.+.++||++++..+....+|...|.+++|+|||.++++|+.|..-+|||
T Consensus 252 ~~l~~l~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~RvWD 331 (459)
T KOG0272|consen 252 TPLQDLEGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKSELLLQEGHSKGVFSIAFQPDGSLAATGGLDSLGRVWD 331 (459)
T ss_pred cchhhhhcchhhheeeeecCCCceeeecccccchhhcccccchhhHhhcccccccceeEecCCCceeeccCccchhheee
Confidence 89999999999999999999999999999999999999999998888889999999999999999999999999999999
Q ss_pred CCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcceEEEEccCCcc
Q psy4393 182 TASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTPLNL 240 (247)
Q Consensus 182 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~ 240 (247)
++++.++..+. .|..+|..++|+|+|..||+|+.|++++|||++.-.++-++..+++.
T Consensus 332 lRtgr~im~L~-gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ly~ipAH~nl 389 (459)
T KOG0272|consen 332 LRTGRCIMFLA-GHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRSELYTIPAHSNL 389 (459)
T ss_pred cccCcEEEEec-ccccceeeEeECCCceEEeecCCCCcEEEeeecccccceecccccch
Confidence 99999876654 47788999999999999999999999999999988877777776654
No 5
>KOG0279|consensus
Probab=100.00 E-value=5.1e-36 Score=218.04 Aligned_cols=215 Identities=33% Similarity=0.531 Sum_probs=188.7
Q ss_pred CceEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEE
Q psy4393 16 NYVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKI 95 (247)
Q Consensus 16 ~~~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v 95 (247)
-......+.||...|..+..++||++.++++.|+.+++||..+++..+.+.+|...|.+++|++|.+.|++|+.|.+|++
T Consensus 52 ~G~~~r~~~GHsH~v~dv~~s~dg~~alS~swD~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTikl 131 (315)
T KOG0279|consen 52 YGVPVRRLTGHSHFVSDVVLSSDGNFALSASWDGTLRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKL 131 (315)
T ss_pred cCceeeeeeccceEecceEEccCCceEEeccccceEEEEEecCCcEEEEEEecCCceEEEEecCCCceeecCCCcceeee
Confidence 35567788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EECCCceEEEEEecC-CccEEEEEEcCC--CCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEec
Q psy4393 96 WELSSGKCLKTLKGH-SNYVFCCNFNPQ--SNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSS 172 (247)
Q Consensus 96 ~d~~~~~~~~~~~~~-~~~v~~~~~~~~--~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 172 (247)
|++............ .+.|.|++|+|. ...|++++.|+.+++||+++-+....+.+|.+.++.+.++|||.+.++|+
T Consensus 132 wnt~g~ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~gh~~~v~t~~vSpDGslcasGg 211 (315)
T KOG0279|consen 132 WNTLGVCKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLRTTFIGHSGYVNTVTVSPDGSLCASGG 211 (315)
T ss_pred eeecccEEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcchhhccccccccEEEEEECCCCCEEecCC
Confidence 999765444333332 688999999998 67899999999999999999888888999999999999999999999999
Q ss_pred CCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcceEEE
Q psy4393 173 YDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAII 233 (247)
Q Consensus 173 ~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~ 233 (247)
.||.+.+||++.++.+..+ .+...|..++|+|+.-+|+.+. +..|+|||...+..+-.
T Consensus 212 kdg~~~LwdL~~~k~lysl--~a~~~v~sl~fspnrywL~~at-~~sIkIwdl~~~~~v~~ 269 (315)
T KOG0279|consen 212 KDGEAMLWDLNEGKNLYSL--EAFDIVNSLCFSPNRYWLCAAT-ATSIKIWDLESKAVVEE 269 (315)
T ss_pred CCceEEEEEccCCceeEec--cCCCeEeeEEecCCceeEeecc-CCceEEEeccchhhhhh
Confidence 9999999999999876654 4567899999999876665554 55699999887655443
No 6
>KOG0286|consensus
Probab=100.00 E-value=3.4e-35 Score=215.06 Aligned_cols=223 Identities=25% Similarity=0.481 Sum_probs=202.4
Q ss_pred CCCceEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeE
Q psy4393 14 KPNYVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTL 93 (247)
Q Consensus 14 ~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 93 (247)
..+...+.++++|...|.++.|++|++++++++.||.+.|||..+...+.-+.-...-|-.++|+|.|+++++|+-|...
T Consensus 42 ~i~~~~rr~LkGH~~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN~C 121 (343)
T KOG0286|consen 42 RIQMRTRRTLKGHLNKIYAMDWSTDSRRIVSASQDGKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDNKC 121 (343)
T ss_pred eeeeeeEEEecccccceeeeEecCCcCeEEeeccCCeEEEEEcccccceeEEecCceeEEEEEECCCCCeEEecCcCcee
Confidence 44566778899999999999999999999999999999999999888777777677779999999999999999999999
Q ss_pred EEEECCCc------eEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECC-CCC
Q psy4393 94 KIWELSSG------KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNR-DGS 166 (247)
Q Consensus 94 ~v~d~~~~------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~-~~~ 166 (247)
.||++.+. +..+.+.+|.+.+.|+.|-++ ..|+|++.|.++.+||+++++.+..+..|.+.|.++.++| +++
T Consensus 122 siy~ls~~d~~g~~~v~r~l~gHtgylScC~f~dD-~~ilT~SGD~TCalWDie~g~~~~~f~GH~gDV~slsl~p~~~n 200 (343)
T KOG0286|consen 122 SIYPLSTRDAEGNVRVSRELAGHTGYLSCCRFLDD-NHILTGSGDMTCALWDIETGQQTQVFHGHTGDVMSLSLSPSDGN 200 (343)
T ss_pred EEEecccccccccceeeeeecCccceeEEEEEcCC-CceEecCCCceEEEEEcccceEEEEecCCcccEEEEecCCCCCC
Confidence 99999854 345678899999999999885 5788999999999999999999999999999999999999 999
Q ss_pred EEEEecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcceEEEEccCC
Q psy4393 167 LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTPL 238 (247)
Q Consensus 167 ~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~ 238 (247)
.+++|+-|+..++||++.+...+.+. .+...|+.+.|.|+|.-+++|+.|++.++||++....+.+|..+.
T Consensus 201 tFvSg~cD~~aklWD~R~~~c~qtF~-ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~a~ys~~~ 271 (343)
T KOG0286|consen 201 TFVSGGCDKSAKLWDVRSGQCVQTFE-GHESDINSVRFFPSGDAFATGSDDATCRLYDLRADQELAVYSHDS 271 (343)
T ss_pred eEEecccccceeeeeccCcceeEeec-ccccccceEEEccCCCeeeecCCCceeEEEeecCCcEEeeeccCc
Confidence 99999999999999999999888875 456789999999999999999999999999999998888887543
No 7
>KOG0266|consensus
Probab=100.00 E-value=2.9e-35 Score=242.35 Aligned_cols=228 Identities=52% Similarity=0.881 Sum_probs=204.8
Q ss_pred CCCCceEEEEEecC-CCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCe--EEEEEecccCCeEEEEECCCCCEEEEEcC
Q psy4393 13 PKPNYVLKFTLAGH-TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK--FEKTISGHKLGISDVAWSSDSRLLVSGSD 89 (247)
Q Consensus 13 ~~~~~~~~~~~~~h-~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 89 (247)
..+.+.+..++.+| ...|.++.|+++|+.+++++.++.+++|+....+ ....+.+|...|.+++|+|+++++++++.
T Consensus 144 ~~~~~~~~~~~~~~~~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~ 223 (456)
T KOG0266|consen 144 SSRVFSLEQTLAGHECPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSD 223 (456)
T ss_pred ccccceeeeeecccccCceEEEEEcCCCCeEEEccCCCcEEEeecccccchhhccccccccceeeeEECCCCcEEEEecC
Confidence 34445566666555 7899999999999999999999999999997666 66667889999999999999999999999
Q ss_pred CCeEEEEEC-CCceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEE
Q psy4393 90 DKTLKIWEL-SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLI 168 (247)
Q Consensus 90 d~~i~v~d~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 168 (247)
|+++++||+ ..+..++.+++|...|.+++|+|+++++++|+.|+.|++||++++++...+..|.++|++++|++++.+|
T Consensus 224 D~tiriwd~~~~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~d~~~l 303 (456)
T KOG0266|consen 224 DKTLRIWDLKDDGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSPDGNLL 303 (456)
T ss_pred CceEEEeeccCCCeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCeEEEeeeccCCceEEEEECCCCCEE
Confidence 999999999 5558889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCeEEEEeCCCce--eeeeeccCCCC-CeEEEEECCCCCEEEEEEcCCeEEEEECCCcceEEEEccCCcc
Q psy4393 169 VSSSYDGLCRIWDTASGQ--CLKTLIDDDNP-PVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTPLNL 240 (247)
Q Consensus 169 ~~~~~dg~i~v~d~~~~~--~~~~~~~~~~~-~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~ 240 (247)
++++.|+.+++||+.++. +...+...... +++++.|+|++.++++++.|+.+++||.+.......+..+.+.
T Consensus 304 ~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~~~~~~~~~~~~~ 378 (456)
T KOG0266|consen 304 VSASYDGTIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRSGKSVGTYTGHSNL 378 (456)
T ss_pred EEcCCCccEEEEECCCCceeeeecccCCCCCCceeEEEECCCCcEEEEecCCCeEEEEEccCCcceeeecccCCc
Confidence 999999999999999998 44555555545 7999999999999999999999999999998888888877765
No 8
>KOG0271|consensus
Probab=100.00 E-value=1.9e-36 Score=228.95 Aligned_cols=215 Identities=32% Similarity=0.608 Sum_probs=185.5
Q ss_pred EEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEE-EEEecccCCeEEEEECC-----CCCEEEEEcCCCeE
Q psy4393 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE-KTISGHKLGISDVAWSS-----DSRLLVSGSDDKTL 93 (247)
Q Consensus 20 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~-~~~~~~~~~v~~~~~~~-----~~~~l~~~~~d~~i 93 (247)
.++.++|..-|.|++|+|||+.||+|+.||.|++||..+++.. ..+.+|...|++++|.| ..+++++++.||.+
T Consensus 150 ~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~v 229 (480)
T KOG0271|consen 150 LFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSV 229 (480)
T ss_pred ceeecCCccEEEEEEECCCcchhhccccCCeEEEecCCCCCcccccccCcccceeEEeecccccCCCccceecccCCCCE
Confidence 4677899999999999999999999999999999998877654 56889999999999976 56789999999999
Q ss_pred EEEECCCceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEE--------------------------
Q psy4393 94 KIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLK-------------------------- 147 (247)
Q Consensus 94 ~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~-------------------------- 147 (247)
+|||+..+.++..+.+|...|.|++|..+ .+|++|+.|++|++|+...|....
T Consensus 230 rIWd~~~~~~~~~lsgHT~~VTCvrwGG~-gliySgS~DrtIkvw~a~dG~~~r~lkGHahwvN~lalsTdy~LRtgaf~ 308 (480)
T KOG0271|consen 230 RIWDTKLGTCVRTLSGHTASVTCVRWGGE-GLIYSGSQDRTIKVWRALDGKLCRELKGHAHWVNHLALSTDYVLRTGAFD 308 (480)
T ss_pred EEEEccCceEEEEeccCccceEEEEEcCC-ceEEecCCCceEEEEEccchhHHHhhcccchheeeeeccchhhhhccccc
Confidence 99999999999999999999999999865 589999999999999875532211
Q ss_pred -----------------------------------------------------eecCCCCCeEEEEECCCCCEEEEecCC
Q psy4393 148 -----------------------------------------------------TLPAHSDPVSAVHFNRDGSLIVSSSYD 174 (247)
Q Consensus 148 -----------------------------------------------------~~~~~~~~i~~~~~~~~~~~l~~~~~d 174 (247)
.+..|..-|..+.|+||++++|+++.|
T Consensus 309 ~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kkpi~rmtgHq~lVn~V~fSPd~r~IASaSFD 388 (480)
T KOG0271|consen 309 HTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKKPITRMTGHQALVNHVSFSPDGRYIASASFD 388 (480)
T ss_pred cccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEecccccccchhhhhchhhheeeEEECCCccEEEEeecc
Confidence 122344557889999999999999999
Q ss_pred CeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcceEEEEcc
Q psy4393 175 GLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICST 236 (247)
Q Consensus 175 g~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~ 236 (247)
..|++||.++|+.+..+. .|..+|..++|+.|.++|++|+.|.+++|||.++++...-+..
T Consensus 389 kSVkLW~g~tGk~lasfR-GHv~~VYqvawsaDsRLlVS~SkDsTLKvw~V~tkKl~~DLpG 449 (480)
T KOG0271|consen 389 KSVKLWDGRTGKFLASFR-GHVAAVYQVAWSADSRLLVSGSKDSTLKVWDVRTKKLKQDLPG 449 (480)
T ss_pred cceeeeeCCCcchhhhhh-hccceeEEEEeccCccEEEEcCCCceEEEEEeeeeeecccCCC
Confidence 999999999999887764 4567899999999999999999999999999998776544443
No 9
>KOG0279|consensus
Probab=100.00 E-value=4.3e-34 Score=208.03 Aligned_cols=220 Identities=29% Similarity=0.444 Sum_probs=192.0
Q ss_pred CceEEEEEecCCCCeEEEEECCC-CCEEEEEeCCCeEEEEecC-----CCeEEEEEecccCCeEEEEECCCCCEEEEEcC
Q psy4393 16 NYVLKFTLAGHTKAVSSVKFSPN-GEWLASSSADKLIKIWGAY-----DGKFEKTISGHKLGISDVAWSSDSRLLVSGSD 89 (247)
Q Consensus 16 ~~~~~~~~~~h~~~v~~~~~s~~-~~~l~~~~~dg~v~iw~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 89 (247)
+..+..++.+|.+.|+.++..+. .+.++++++|..+.+|++. .|..++.+.+|...|..+..++||++.++++.
T Consensus 4 ~l~l~~tl~gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~sw 83 (315)
T KOG0279|consen 4 QLVLRGTLEGHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSASW 83 (315)
T ss_pred hheeeeeecCCCceEEEEEeecCCCceEEEcccceEEEEEEeccCccccCceeeeeeccceEecceEEccCCceEEeccc
Confidence 34567889999999999999886 4578889999999999864 35667889999999999999999999999999
Q ss_pred CCeEEEEECCCceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCC-CCCeEEEEECCC--CC
Q psy4393 90 DKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAH-SDPVSAVHFNRD--GS 166 (247)
Q Consensus 90 d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~-~~~i~~~~~~~~--~~ 166 (247)
|+.+++||+.+++..+.+.+|...|.+++++++...+++|+.|.+|++|+............. .+.|+|+.|+|+ ..
T Consensus 84 D~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~g~ck~t~~~~~~~~WVscvrfsP~~~~p 163 (315)
T KOG0279|consen 84 DGTLRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLGVCKYTIHEDSHREWVSCVRFSPNESNP 163 (315)
T ss_pred cceEEEEEecCCcEEEEEEecCCceEEEEecCCCceeecCCCcceeeeeeecccEEEEEecCCCcCcEEEEEEcCCCCCc
Confidence 999999999999999999999999999999999999999999999999999765444333332 678999999998 67
Q ss_pred EEEEecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcceEEEEcc
Q psy4393 167 LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICST 236 (247)
Q Consensus 167 ~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~ 236 (247)
++++++.|+.+++||+++-+....+ ..+..-++.+++||||...++|+.||.+.+||++.++.+-.+..
T Consensus 164 ~Ivs~s~DktvKvWnl~~~~l~~~~-~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k~lysl~a 232 (315)
T KOG0279|consen 164 IIVSASWDKTVKVWNLRNCQLRTTF-IGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEGKNLYSLEA 232 (315)
T ss_pred EEEEccCCceEEEEccCCcchhhcc-ccccccEEEEEECCCCCEEecCCCCceEEEEEccCCceeEeccC
Confidence 9999999999999999987765554 45667889999999999999999999999999999877544433
No 10
>KOG0315|consensus
Probab=100.00 E-value=3.8e-34 Score=205.41 Aligned_cols=220 Identities=21% Similarity=0.403 Sum_probs=189.2
Q ss_pred EEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECC
Q psy4393 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELS 99 (247)
Q Consensus 20 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~ 99 (247)
..++.+|++.|+++.|..+|+++++|++||+++|||+......+.+. +..+|+++..+|+...|+++..+|.|++||+.
T Consensus 76 v~t~e~h~kNVtaVgF~~dgrWMyTgseDgt~kIWdlR~~~~qR~~~-~~spVn~vvlhpnQteLis~dqsg~irvWDl~ 154 (311)
T KOG0315|consen 76 VATFEGHTKNVTAVGFQCDGRWMYTGSEDGTVKIWDLRSLSCQRNYQ-HNSPVNTVVLHPNQTELISGDQSGNIRVWDLG 154 (311)
T ss_pred eeEEeccCCceEEEEEeecCeEEEecCCCceEEEEeccCcccchhcc-CCCCcceEEecCCcceEEeecCCCcEEEEEcc
Confidence 57778999999999999999999999999999999998866655554 56899999999999999999999999999998
Q ss_pred CceEEEEEe-cCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCe------EEEeecCCCCCeEEEEECCCCCEEEEec
Q psy4393 100 SGKCLKTLK-GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK------CLKTLPAHSDPVSAVHFNRDGSLIVSSS 172 (247)
Q Consensus 100 ~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~------~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 172 (247)
...+.+.+. .....+.++...|+|..++.+...|.+++|++-..+ ++..+++|.+.+....++|++++|++++
T Consensus 155 ~~~c~~~liPe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~s 234 (311)
T KOG0315|consen 155 ENSCTHELIPEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCS 234 (311)
T ss_pred CCccccccCCCCCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeec
Confidence 876655543 334578899999999999999999999999997543 4566789999999999999999999999
Q ss_pred CCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcceEEEEccCCcc
Q psy4393 173 YDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTPLNL 240 (247)
Q Consensus 173 ~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~ 240 (247)
.|.+++||+.++--........+..-+..++||.||+||++++.|+.+++||...++.+..+..+..+
T Consensus 235 sdktv~iwn~~~~~kle~~l~gh~rWvWdc~FS~dg~YlvTassd~~~rlW~~~~~k~v~qy~gh~K~ 302 (311)
T KOG0315|consen 235 SDKTVKIWNTDDFFKLELVLTGHQRWVWDCAFSADGEYLVTASSDHTARLWDLSAGKEVRQYQGHHKA 302 (311)
T ss_pred CCceEEEEecCCceeeEEEeecCCceEEeeeeccCccEEEecCCCCceeecccccCceeeecCCcccc
Confidence 99999999988762223334455567889999999999999999999999999999988888887663
No 11
>KOG0266|consensus
Probab=100.00 E-value=2.9e-33 Score=230.49 Aligned_cols=219 Identities=39% Similarity=0.703 Sum_probs=192.9
Q ss_pred EEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEec-CCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEE
Q psy4393 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGA-YDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWE 97 (247)
Q Consensus 19 ~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d 97 (247)
+..++.+|...|.+++|+|+++++++++.|+++++||. ..+.....+.+|...|++++|+|+++.+++|+.|++|++||
T Consensus 195 ~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd 274 (456)
T KOG0266|consen 195 LLRELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKDDGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWD 274 (456)
T ss_pred hhccccccccceeeeEECCCCcEEEEecCCceEEEeeccCCCeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEe
Confidence 34455789999999999999999999999999999999 55688899999999999999999999999999999999999
Q ss_pred CCCceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCe--EEEeecCCCC--CeEEEEECCCCCEEEEecC
Q psy4393 98 LSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK--CLKTLPAHSD--PVSAVHFNRDGSLIVSSSY 173 (247)
Q Consensus 98 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~--~~~~~~~~~~--~i~~~~~~~~~~~l~~~~~ 173 (247)
++++++...+.+|.+.|.+++|+++++++++++.|+.|++||+.++. +...+..+.. ++++++|+|++.++++++.
T Consensus 275 ~~~~~~~~~l~~hs~~is~~~f~~d~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~ 354 (456)
T KOG0266|consen 275 VRTGECVRKLKGHSDGISGLAFSPDGNLLVSASYDGTIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASL 354 (456)
T ss_pred ccCCeEEEeeeccCCceEEEEECCCCCEEEEcCCCccEEEEECCCCceeeeecccCCCCCCceeEEEECCCCcEEEEecC
Confidence 99999999999999999999999999999999999999999999998 4566655554 4899999999999999999
Q ss_pred CCeEEEEeCCCceeeeeeccCCCC--CeEEEEECCCCCEEEEEEcCCeEEEEECCCcceEEEEccC
Q psy4393 174 DGLCRIWDTASGQCLKTLIDDDNP--PVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTP 237 (247)
Q Consensus 174 dg~i~v~d~~~~~~~~~~~~~~~~--~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~ 237 (247)
|+.+++||+..+.....+..+... .+.....++.++++++|+.|+.|++||...+..+..+..+
T Consensus 355 d~~~~~w~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~sg~~d~~v~~~~~~s~~~~~~l~~h 420 (456)
T KOG0266|consen 355 DRTLKLWDLRSGKSVGTYTGHSNLVRCIFSPTLSTGGKLIYSGSEDGSVYVWDSSSGGILQRLEGH 420 (456)
T ss_pred CCeEEEEEccCCcceeeecccCCcceeEecccccCCCCeEEEEeCCceEEEEeCCccchhhhhcCC
Confidence 999999999998877776555443 3444455789999999999999999999876655555554
No 12
>KOG0263|consensus
Probab=100.00 E-value=1.1e-33 Score=230.74 Aligned_cols=218 Identities=25% Similarity=0.519 Sum_probs=196.4
Q ss_pred EEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCC-------------------------------eEEEEEeccc
Q psy4393 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG-------------------------------KFEKTISGHK 69 (247)
Q Consensus 21 ~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~-------------------------------~~~~~~~~~~ 69 (247)
+++..-...++|..|++|+.+||.|..|..|++|.+... .....+.+|.
T Consensus 372 YT~~nt~~~v~ca~fSddssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L~GH~ 451 (707)
T KOG0263|consen 372 YTFHNTYQGVTCAEFSDDSSMLACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRTLYGHS 451 (707)
T ss_pred EEEEEcCCcceeEeecCCcchhhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEEeecCC
Confidence 444444568999999999999999999999999976521 1123467899
Q ss_pred CCeEEEEECCCCCEEEEEcCCCeEEEEECCCceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEee
Q psy4393 70 LGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTL 149 (247)
Q Consensus 70 ~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~ 149 (247)
++|....|+|+.++|+++++|+++++|.+.+..++-..++|..+|+.+.|+|.|-++|+++.|++-++|......+.+.+
T Consensus 452 GPVyg~sFsPd~rfLlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~GyYFatas~D~tArLWs~d~~~PlRif 531 (707)
T KOG0263|consen 452 GPVYGCSFSPDRRFLLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRGYYFATASHDQTARLWSTDHNKPLRIF 531 (707)
T ss_pred CceeeeeecccccceeeccCCcceeeeecccceeEEEecCCCcceeeEEecCCceEEEecCCCceeeeeecccCCchhhh
Confidence 99999999999999999999999999999999998889999999999999999999999999999999999888889999
Q ss_pred cCCCCCeEEEEECCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcc
Q psy4393 150 PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVT 229 (247)
Q Consensus 150 ~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~ 229 (247)
..|-+.+.|+.|+|+..++++|+.|..+++||+.+|..++.+ .+|..+|.+++|||+|++|++|+.||.|++||...+.
T Consensus 532 aghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF-~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~~ 610 (707)
T KOG0263|consen 532 AGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIF-TGHKGPVTALAFSPCGRYLASGDEDGLIKIWDLANGS 610 (707)
T ss_pred cccccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEe-cCCCCceEEEEEcCCCceEeecccCCcEEEEEcCCCc
Confidence 999999999999999999999999999999999999987665 5688899999999999999999999999999999988
Q ss_pred eEEEEccCCc
Q psy4393 230 PAIICSTPLN 239 (247)
Q Consensus 230 ~~~~~~~~~~ 239 (247)
++..+..+.+
T Consensus 611 ~v~~l~~Ht~ 620 (707)
T KOG0263|consen 611 LVKQLKGHTG 620 (707)
T ss_pred chhhhhcccC
Confidence 8877777644
No 13
>KOG0286|consensus
Probab=100.00 E-value=1.3e-32 Score=201.60 Aligned_cols=210 Identities=26% Similarity=0.498 Sum_probs=188.3
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCeEEEEecCCC------eEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCC
Q psy4393 27 TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG------KFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSS 100 (247)
Q Consensus 27 ~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~ 100 (247)
..-|..++|+|.|+++|.|+-|....||++... +....+.+|...+.++.|-+| ..|+|++.|.++.+||+++
T Consensus 97 s~WVMtCA~sPSg~~VAcGGLdN~Csiy~ls~~d~~g~~~v~r~l~gHtgylScC~f~dD-~~ilT~SGD~TCalWDie~ 175 (343)
T KOG0286|consen 97 SSWVMTCAYSPSGNFVACGGLDNKCSIYPLSTRDAEGNVRVSRELAGHTGYLSCCRFLDD-NHILTGSGDMTCALWDIET 175 (343)
T ss_pred ceeEEEEEECCCCCeEEecCcCceeEEEecccccccccceeeeeecCccceeEEEEEcCC-CceEecCCCceEEEEEccc
Confidence 456899999999999999999999999998744 345668899999999999885 5689999999999999999
Q ss_pred ceEEEEEecCCccEEEEEEcC-CCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCCCeEEE
Q psy4393 101 GKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 179 (247)
Q Consensus 101 ~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v 179 (247)
++.+..+.+|.+.|.+++++| +++.+++|+.|+..++||+|.+.+.+.|..|+..|++++|.|+|.-+++|+.|+..++
T Consensus 176 g~~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~c~qtF~ghesDINsv~ffP~G~afatGSDD~tcRl 255 (343)
T KOG0286|consen 176 GQQTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQCVQTFEGHESDINSVRFFPSGDAFATGSDDATCRL 255 (343)
T ss_pred ceEEEEecCCcccEEEEecCCCCCCeEEecccccceeeeeccCcceeEeecccccccceEEEccCCCeeeecCCCceeEE
Confidence 999999999999999999999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCceeeeeeccC-CCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcceEEEEccC
Q psy4393 180 WDTASGQCLKTLIDD-DNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTP 237 (247)
Q Consensus 180 ~d~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~ 237 (247)
||++..+.+..+... ...+|+.++||..|++|.+|..|.++.|||.--.+-..++..+
T Consensus 256 yDlRaD~~~a~ys~~~~~~gitSv~FS~SGRlLfagy~d~~c~vWDtlk~e~vg~L~GH 314 (343)
T KOG0286|consen 256 YDLRADQELAVYSHDSIICGITSVAFSKSGRLLFAGYDDFTCNVWDTLKGERVGVLAGH 314 (343)
T ss_pred EeecCCcEEeeeccCcccCCceeEEEcccccEEEeeecCCceeEeeccccceEEEeecc
Confidence 999998877776543 3578999999999999999999999999997555544444443
No 14
>KOG0273|consensus
Probab=100.00 E-value=5.3e-33 Score=215.09 Aligned_cols=222 Identities=26% Similarity=0.498 Sum_probs=199.4
Q ss_pred EEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCC
Q psy4393 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSS 100 (247)
Q Consensus 21 ~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~ 100 (247)
.++..|.++|.+++|+..|.+|++++.|+++.+||..++...+.+.-|..+-.++.|-.+ ..+++++.|+.|+++.+..
T Consensus 270 ~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~q~f~~~s~~~lDVdW~~~-~~F~ts~td~~i~V~kv~~ 348 (524)
T KOG0273|consen 270 STLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVKQQFEFHSAPALDVDWQSN-DEFATSSTDGCIHVCKVGE 348 (524)
T ss_pred hhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceEEEeeeeccCCccceEEecC-ceEeecCCCceEEEEEecC
Confidence 355679999999999999999999999999999999999999888888887678888754 4588999999999999998
Q ss_pred ceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCC---------CEEEEe
Q psy4393 101 GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDG---------SLIVSS 171 (247)
Q Consensus 101 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~---------~~l~~~ 171 (247)
..++.++.+|.+.|.++.|+|.+.+|++++.|+++++|..........+.+|...|..+.|+|.| ..++++
T Consensus 349 ~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sa 428 (524)
T KOG0273|consen 349 DRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSNSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASA 428 (524)
T ss_pred CCcceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCCcchhhhhhhccceeeEeecCCCCccCCCcCCceEEEe
Confidence 88999999999999999999999999999999999999998888888999999999999999865 468999
Q ss_pred cCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcceEEEEccCCccccee
Q psy4393 172 SYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTPLNLNYFY 244 (247)
Q Consensus 172 ~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~ 244 (247)
+.|+.+++||+..+.++..+. .+..+|..++|+|+|+++|+|+.||.|++|+.+..+.+..++..-.....|
T Consensus 429 s~dstV~lwdv~~gv~i~~f~-kH~~pVysvafS~~g~ylAsGs~dg~V~iws~~~~~l~~s~~~~~~Ifel~ 500 (524)
T KOG0273|consen 429 SFDSTVKLWDVESGVPIHTLM-KHQEPVYSVAFSPNGRYLASGSLDGCVHIWSTKTGKLVKSYQGTGGIFELC 500 (524)
T ss_pred ecCCeEEEEEccCCceeEeec-cCCCceEEEEecCCCcEEEecCCCCeeEeccccchheeEeecCCCeEEEEE
Confidence 999999999999999988764 566789999999999999999999999999999999888877655444443
No 15
>PTZ00421 coronin; Provisional
Probab=100.00 E-value=7.9e-32 Score=221.82 Aligned_cols=212 Identities=19% Similarity=0.344 Sum_probs=177.7
Q ss_pred EecCCCCeEEEEECC-CCCEEEEEeCCCeEEEEecCCCe-------EEEEEecccCCeEEEEECCCC-CEEEEEcCCCeE
Q psy4393 23 LAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGK-------FEKTISGHKLGISDVAWSSDS-RLLVSGSDDKTL 93 (247)
Q Consensus 23 ~~~h~~~v~~~~~s~-~~~~l~~~~~dg~v~iw~~~~~~-------~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i 93 (247)
+.+|.+.|.+++|+| ++++|++|+.|+.|++|++.++. ....+.+|...|.+++|+|++ +.|++++.|+.|
T Consensus 71 l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtV 150 (493)
T PTZ00421 71 LLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVV 150 (493)
T ss_pred EeCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEE
Confidence 568999999999999 88999999999999999986542 345678899999999999975 689999999999
Q ss_pred EEEECCCceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCC-eEEEEECCCCCEEEEec
Q psy4393 94 KIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDP-VSAVHFNRDGSLIVSSS 172 (247)
Q Consensus 94 ~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~-i~~~~~~~~~~~l~~~~ 172 (247)
++||+.+++....+..|...|.+++|+|++.++++++.|+.|++||+++++.+..+..|.+. ...+.|.+++..+++++
T Consensus 151 rIWDl~tg~~~~~l~~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~w~~~~~~ivt~G 230 (493)
T PTZ00421 151 NVWDVERGKAVEVIKCHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASAKSQRCLWAKRKDLIITLG 230 (493)
T ss_pred EEEECCCCeEEEEEcCCCCceEEEEEECCCCEEEEecCCCEEEEEECCCCcEEEEEecCCCCcceEEEEcCCCCeEEEEe
Confidence 99999999888888889999999999999999999999999999999999988888888764 34667888877777654
Q ss_pred ----CCCeEEEEeCCCceee-eeeccCCCCCeEEEEECCCCCEEEEEE-cCCeEEEEECCCcceEEEE
Q psy4393 173 ----YDGLCRIWDTASGQCL-KTLIDDDNPPVSFVKFSPNGKYILAAT-LDNTLKLWDSKVVTPAIIC 234 (247)
Q Consensus 173 ----~dg~i~v~d~~~~~~~-~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~ 234 (247)
.|+.|++||+++.... ..........+....|++++.+|++++ .|+.|++||.....++...
T Consensus 231 ~s~s~Dr~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~~~~~~~ 298 (493)
T PTZ00421 231 CSKSQQRQIMLWDTRKMASPYSTVDLDQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMNERLTFCS 298 (493)
T ss_pred cCCCCCCeEEEEeCCCCCCceeEeccCCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCCceEEEe
Confidence 4789999999875432 222223334566678999999999887 5999999999988766553
No 16
>KOG0291|consensus
Probab=100.00 E-value=1.5e-32 Score=223.27 Aligned_cols=208 Identities=31% Similarity=0.582 Sum_probs=184.5
Q ss_pred ecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceE
Q psy4393 24 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKC 103 (247)
Q Consensus 24 ~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~ 103 (247)
.+|...+++++++|||+++|+|+.||.|+|||...+-+..++..|..+|+.+.|+..|+.+++++-||+|+.||+.....
T Consensus 347 QgH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrN 426 (893)
T KOG0291|consen 347 QGHSDRITSLAYSPDGQLIATGAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRN 426 (893)
T ss_pred cccccceeeEEECCCCcEEEeccCCCcEEEEeccCceEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeecccce
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred EEEEecCC-ccEEEEEEcCCCCEEEEeeCCC-CEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCCCeEEEEe
Q psy4393 104 LKTLKGHS-NYVFCCNFNPQSNLIVSGSFDE-SVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181 (247)
Q Consensus 104 ~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d~-~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d 181 (247)
.+++.... -...|++.+|.|.++.+|+.|. .|.+|++++|+.+..+.+|++||.+++|+|++..|+++++|.+|++||
T Consensus 427 fRTft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~ 506 (893)
T KOG0291|consen 427 FRTFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLLASGSWDKTVRIWD 506 (893)
T ss_pred eeeecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeeehhcCCCCcceeeEEccccCeEEeccccceEEEEE
Confidence 88887543 3467888999999999998776 599999999999999999999999999999999999999999999999
Q ss_pred CCCce-eeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcceEEE
Q psy4393 182 TASGQ-CLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAII 233 (247)
Q Consensus 182 ~~~~~-~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~ 233 (247)
+-... ....+. ....+..++|+|||+.|++++.||.|.+||.+.+.+.-.
T Consensus 507 if~s~~~vEtl~--i~sdvl~vsfrPdG~elaVaTldgqItf~d~~~~~q~~~ 557 (893)
T KOG0291|consen 507 IFSSSGTVETLE--IRSDVLAVSFRPDGKELAVATLDGQITFFDIKEAVQVGS 557 (893)
T ss_pred eeccCceeeeEe--eccceeEEEEcCCCCeEEEEEecceEEEEEhhhceeecc
Confidence 86542 222222 234578899999999999999999999999987665533
No 17
>KOG0284|consensus
Probab=100.00 E-value=2.3e-34 Score=219.11 Aligned_cols=203 Identities=31% Similarity=0.560 Sum_probs=188.4
Q ss_pred EecCC-CCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCc
Q psy4393 23 LAGHT-KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSG 101 (247)
Q Consensus 23 ~~~h~-~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~ 101 (247)
+.+|+ ..|++++|+|....+++|+.||.|+|||....+....+.+|.-.|.+++|+|....|+++++|..|++||.+++
T Consensus 175 ~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprSg 254 (464)
T KOG0284|consen 175 IQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRSG 254 (464)
T ss_pred hhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCchhheeccCCCCcceeccCCccceeEEccCCceeEeecCCCc
Confidence 34454 99999999999999999999999999999888888889999999999999999999999999999999999999
Q ss_pred eEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCC-CCEEEEecCCCeEEEE
Q psy4393 102 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRD-GSLIVSSSYDGLCRIW 180 (247)
Q Consensus 102 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~dg~i~v~ 180 (247)
.++.++.+|+..|..+.|+|++++|++++.|..++++|+++-+.+..+++|...++++.|+|- ..+|.+|+.||.+..|
T Consensus 255 ~cl~tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~mkEl~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~ 334 (464)
T KOG0284|consen 255 SCLATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKELFTYRGHKKDVTSLTWHPLNESLFTSGGSDGSVVHW 334 (464)
T ss_pred chhhhhhhccceEEEEEEcCCCCeeEEccCCceEEEEehhHhHHHHHhhcchhhheeeccccccccceeeccCCCceEEE
Confidence 999999999999999999999999999999999999999988888899999999999999995 4578889999999999
Q ss_pred eCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEEC
Q psy4393 181 DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225 (247)
Q Consensus 181 d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~ 225 (247)
.+...+++..+...+...|..++|+|=|..|++|+.|.++++|.-
T Consensus 335 ~v~~~~p~~~i~~AHd~~iwsl~~hPlGhil~tgsnd~t~rfw~r 379 (464)
T KOG0284|consen 335 VVGLEEPLGEIPPAHDGEIWSLAYHPLGHILATGSNDRTVRFWTR 379 (464)
T ss_pred eccccccccCCCcccccceeeeeccccceeEeecCCCcceeeecc
Confidence 998767777777778889999999999999999999999999964
No 18
>KOG0285|consensus
Probab=100.00 E-value=2.8e-32 Score=204.93 Aligned_cols=218 Identities=29% Similarity=0.579 Sum_probs=189.3
Q ss_pred CCCCCceEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCC
Q psy4393 12 NPKPNYVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDK 91 (247)
Q Consensus 12 ~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 91 (247)
+...+|.+...+.+|.+-|.|+++.|..+++++|+.|++++|||+.+++....+.+|...|..+++++-.-++++++.|+
T Consensus 136 eWHapwKl~rVi~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~gedk 215 (460)
T KOG0285|consen 136 EWHAPWKLYRVISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGEDK 215 (460)
T ss_pred cccCcceehhhhhhccceEEEEeeCCCceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEecCCC
Confidence 33444555556679999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEECCCceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEe
Q psy4393 92 TLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSS 171 (247)
Q Consensus 92 ~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 171 (247)
.|+-||++..+.++...+|-+.|.|++.+|.-..+++|+.|..+++||+|+...+..+.+|..+|..+.+.|-...+++|
T Consensus 216 ~VKCwDLe~nkvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~l~GH~~~V~~V~~~~~dpqvit~ 295 (460)
T KOG0285|consen 216 QVKCWDLEYNKVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHVLSGHTNPVASVMCQPTDPQVITG 295 (460)
T ss_pred eeEEEechhhhhHHHhccccceeEEEeccccceeEEecCCcceEEEeeecccceEEEecCCCCcceeEEeecCCCceEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988899999
Q ss_pred cCCCeEEEEeCCCceeeeeeccC----------------------------------------CCCCeEEEEECCCCCEE
Q psy4393 172 SYDGLCRIWDTASGQCLKTLIDD----------------------------------------DNPPVSFVKFSPNGKYI 211 (247)
Q Consensus 172 ~~dg~i~v~d~~~~~~~~~~~~~----------------------------------------~~~~v~~~~~s~~~~~l 211 (247)
+.|++|++||++.++....+..+ +...++.++...|+ ++
T Consensus 296 S~D~tvrlWDl~agkt~~tlt~hkksvral~lhP~e~~fASas~dnik~w~~p~g~f~~nlsgh~~iintl~~nsD~-v~ 374 (460)
T KOG0285|consen 296 SHDSTVRLWDLRAGKTMITLTHHKKSVRALCLHPKENLFASASPDNIKQWKLPEGEFLQNLSGHNAIINTLSVNSDG-VL 374 (460)
T ss_pred cCCceEEEeeeccCceeEeeecccceeeEEecCCchhhhhccCCccceeccCCccchhhccccccceeeeeeeccCc-eE
Confidence 99999999999988754443211 11224445554443 67
Q ss_pred EEEEcCCeEEEEECCCcce
Q psy4393 212 LAATLDNTLKLWDSKVVTP 230 (247)
Q Consensus 212 ~~~~~dg~i~vwd~~~~~~ 230 (247)
++|+..|.+.+||.+++..
T Consensus 375 ~~G~dng~~~fwdwksg~n 393 (460)
T KOG0285|consen 375 VSGGDNGSIMFWDWKSGHN 393 (460)
T ss_pred EEcCCceEEEEEecCcCcc
Confidence 7788888899998877643
No 19
>KOG0316|consensus
Probab=100.00 E-value=2.1e-32 Score=195.14 Aligned_cols=218 Identities=31% Similarity=0.531 Sum_probs=195.3
Q ss_pred EEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECC
Q psy4393 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELS 99 (247)
Q Consensus 20 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~ 99 (247)
...+..|.++|..+.|+-+|++.++|+.|.+|++|+...+.+.....+|...|.+++.+.|+..+++++.|..+.+||+.
T Consensus 10 ~~~l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~ 89 (307)
T KOG0316|consen 10 LSILDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVN 89 (307)
T ss_pred ceeecccccceEEEEEccCCCEEEEcCCCceEEeecccccceeeeecCCCceeeeccccccccccccCCCCceEEEEEcc
Confidence 35577899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCC--eEEEeecCCCCCeEEEEECCCCCEEEEecCCCeE
Q psy4393 100 SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG--KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 177 (247)
Q Consensus 100 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i 177 (247)
+|+..+.+++|...|..+.|+.+...+++|+.|..+++||.++. ++++.+......|.++..+ +..+++|+.||.+
T Consensus 90 TGkv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v~--~heIvaGS~DGtv 167 (307)
T KOG0316|consen 90 TGKVDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDVA--EHEIVAGSVDGTV 167 (307)
T ss_pred cCeeeeecccccceeeEEEecCcceEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEec--ccEEEeeccCCcE
Confidence 99999999999999999999999999999999999999999864 4667776666788888775 4568999999999
Q ss_pred EEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcceEEEEccCCcccc
Q psy4393 178 RIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTPLNLNY 242 (247)
Q Consensus 178 ~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~ 242 (247)
+.||++.++....++ ..||+++.|++|++.+++++.|+++++.|..+++.+.+|-.+.+-+|
T Consensus 168 RtydiR~G~l~sDy~---g~pit~vs~s~d~nc~La~~l~stlrLlDk~tGklL~sYkGhkn~ey 229 (307)
T KOG0316|consen 168 RTYDIRKGTLSSDYF---GHPITSVSFSKDGNCSLASSLDSTLRLLDKETGKLLKSYKGHKNMEY 229 (307)
T ss_pred EEEEeecceeehhhc---CCcceeEEecCCCCEEEEeeccceeeecccchhHHHHHhccccccee
Confidence 999999997654443 46899999999999999999999999999988887777666655443
No 20
>KOG0295|consensus
Probab=100.00 E-value=5.4e-33 Score=208.88 Aligned_cols=217 Identities=35% Similarity=0.604 Sum_probs=196.8
Q ss_pred EEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCC-CeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEEC
Q psy4393 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-GKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWEL 98 (247)
Q Consensus 20 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~ 98 (247)
..++.||+.+|..++|+..|++|++++.|=.+++||..+ -++.....+|...|.++.|-|.|.+|++++.|.+|+.|++
T Consensus 143 e~~LrGHt~sv~di~~~a~Gk~l~tcSsDl~~~LWd~~~~~~c~ks~~gh~h~vS~V~f~P~gd~ilS~srD~tik~We~ 222 (406)
T KOG0295|consen 143 ERSLRGHTDSVFDISFDASGKYLATCSSDLSAKLWDFDTFFRCIKSLIGHEHGVSSVFFLPLGDHILSCSRDNTIKAWEC 222 (406)
T ss_pred hhhhhccccceeEEEEecCccEEEecCCccchhheeHHHHHHHHHHhcCcccceeeEEEEecCCeeeecccccceeEEec
Confidence 446679999999999999999999999998899999865 3445567789999999999999999999999999999999
Q ss_pred CCceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCC--------------
Q psy4393 99 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRD-------------- 164 (247)
Q Consensus 99 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~-------------- 164 (247)
.++-++.++.+|...+..++.+.||.++++++.|.++++|-+.++++...+..|+.++.+++|.|.
T Consensus 223 ~tg~cv~t~~~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~ 302 (406)
T KOG0295|consen 223 DTGYCVKTFPGHSEWVRMVRVNQDGTIIASCSNDQTLRVWVVATKQCKAELREHEHPVECIAWAPESSYPSISEATGSTN 302 (406)
T ss_pred ccceeEEeccCchHhEEEEEecCCeeEEEecCCCceEEEEEeccchhhhhhhccccceEEEEecccccCcchhhccCCCC
Confidence 999999999999999999999999999999999999999999999888899999999999999762
Q ss_pred -CCEEEEecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcceEEEEccC
Q psy4393 165 -GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTP 237 (247)
Q Consensus 165 -~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~ 237 (247)
+.++.+++.|++|++||+.++.++.++..+ ..-|..++|+|.|+||+++..|+++++||.+..++..+...+
T Consensus 303 ~~~~l~s~SrDktIk~wdv~tg~cL~tL~gh-dnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~~ah 375 (406)
T KOG0295|consen 303 GGQVLGSGSRDKTIKIWDVSTGMCLFTLVGH-DNWVRGVAFSPGGKYILSCADDKTLRVWDLKNLQCMKTLEAH 375 (406)
T ss_pred CccEEEeecccceEEEEeccCCeEEEEEecc-cceeeeeEEcCCCeEEEEEecCCcEEEEEeccceeeeccCCC
Confidence 258999999999999999999999887654 456899999999999999999999999999999887776643
No 21
>KOG0284|consensus
Probab=100.00 E-value=8.7e-34 Score=215.97 Aligned_cols=211 Identities=30% Similarity=0.523 Sum_probs=185.7
Q ss_pred ecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecc-cCCeEEEEECCCCCEEEEEcCCCeEEEEECCCce
Q psy4393 24 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH-KLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGK 102 (247)
Q Consensus 24 ~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~ 102 (247)
..|..+|+++.|+++|.++++|+.+|.|++|+..-. .+..+..| ...|++++|+|....++++++||.|+|||....+
T Consensus 135 QaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnmn-nVk~~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~k 213 (464)
T KOG0284|consen 135 QAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNMN-NVKIIQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPK 213 (464)
T ss_pred hhhcccceeEEEccCCCEEEEcCCCceEEecccchh-hhHHhhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCc
Confidence 479999999999999999999999999999986433 33344444 4889999999999999999999999999998888
Q ss_pred EEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCCCeEEEEeC
Q psy4393 103 CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 182 (247)
Q Consensus 103 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~ 182 (247)
....+.+|.-.|.+++|+|...++++++.|..|++||.++++++..+..|...|..+.|+|++.+|++++.|..+++||+
T Consensus 214 ee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprSg~cl~tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv~Di 293 (464)
T KOG0284|consen 214 EERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRSGSCLATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDI 293 (464)
T ss_pred hhheeccCCCCcceeccCCccceeEEccCCceeEeecCCCcchhhhhhhccceEEEEEEcCCCCeeEEccCCceEEEEeh
Confidence 77888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeeeeeccCCCCCeEEEEECCCC-CEEEEEEcCCeEEEEECCCcceEEEEcc
Q psy4393 183 ASGQCLKTLIDDDNPPVSFVKFSPNG-KYILAATLDNTLKLWDSKVVTPAIICST 236 (247)
Q Consensus 183 ~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~vwd~~~~~~~~~~~~ 236 (247)
++-+.+..+. .+...++++.|+|-. .+|.+|+.||.|..|......|+..+..
T Consensus 294 R~mkEl~~~r-~Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~~v~~~~p~~~i~~ 347 (464)
T KOG0284|consen 294 RTMKELFTYR-GHKKDVTSLTWHPLNESLFTSGGSDGSVVHWVVGLEEPLGEIPP 347 (464)
T ss_pred hHhHHHHHhh-cchhhheeeccccccccceeeccCCCceEEEeccccccccCCCc
Confidence 9766555543 455678999999954 5778899999999999987777665443
No 22
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=100.00 E-value=1.6e-30 Score=201.58 Aligned_cols=212 Identities=42% Similarity=0.782 Sum_probs=189.8
Q ss_pred EEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCc
Q psy4393 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSG 101 (247)
Q Consensus 22 ~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~ 101 (247)
++.+|.++|.+++|+|++++|++++.+|.+++|+..++.....+..|...+..+.|+|+++.+++++.++.+++|++.++
T Consensus 4 ~~~~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~~ 83 (289)
T cd00200 4 TLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLETG 83 (289)
T ss_pred HhcccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcCcc
Confidence 45689999999999999999999999999999999888777778888888999999999999999999999999999987
Q ss_pred eEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCCCeEEEEe
Q psy4393 102 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181 (247)
Q Consensus 102 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d 181 (247)
+....+..+...+.++.|++++.++++++.++.+++||+++++....+..|...+.++.|+|++.++++++.++.+.+||
T Consensus 84 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d 163 (289)
T cd00200 84 ECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWD 163 (289)
T ss_pred cceEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcCcCCEEEEEcCCCcEEEEE
Confidence 77778888888899999999988899888899999999998888888888888999999999999998888899999999
Q ss_pred CCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcceEEEE
Q psy4393 182 TASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIIC 234 (247)
Q Consensus 182 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 234 (247)
+++++....+. .+...+.++.|+|+++.+++++.||.|++||.+...++..+
T Consensus 164 ~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~ 215 (289)
T cd00200 164 LRTGKCVATLT-GHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTL 215 (289)
T ss_pred ccccccceeEe-cCccccceEEECCCcCEEEEecCCCcEEEEECCCCceecch
Confidence 98877665554 44557899999999999999999999999999887766665
No 23
>KOG0645|consensus
Probab=100.00 E-value=4.9e-30 Score=186.26 Aligned_cols=208 Identities=32% Similarity=0.615 Sum_probs=179.8
Q ss_pred ceEEEEEecCCCCeEEEEECCC-CCEEEEEeCCCeEEEEecCCC---eEEEEE-ecccCCeEEEEECCCCCEEEEEcCCC
Q psy4393 17 YVLKFTLAGHTKAVSSVKFSPN-GEWLASSSADKLIKIWGAYDG---KFEKTI-SGHKLGISDVAWSSDSRLLVSGSDDK 91 (247)
Q Consensus 17 ~~~~~~~~~h~~~v~~~~~s~~-~~~l~~~~~dg~v~iw~~~~~---~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~ 91 (247)
.++..++.+|.+++-.++|+|- |..||+|+.|..|++|+...+ .+...+ .+|...|++++|+|.|++|++++-|.
T Consensus 4 l~~~~~~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~ 83 (312)
T KOG0645|consen 4 LILEQKLSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFDA 83 (312)
T ss_pred ceeEEeecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeeccc
Confidence 4567788899999999999998 889999999999999998742 222223 36788899999999999999999999
Q ss_pred eEEEEECCCc--eEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCC---eEEEeecCCCCCeEEEEECCCCC
Q psy4393 92 TLKIWELSSG--KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG---KCLKTLPAHSDPVSAVHFNRDGS 166 (247)
Q Consensus 92 ~i~v~d~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~---~~~~~~~~~~~~i~~~~~~~~~~ 166 (247)
++.+|.-..+ +++..+.+|...|.+++|+++|++||+++.|+.+-+|.+..+ +++..++.|...|..+.|+|...
T Consensus 84 t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt~d 163 (312)
T KOG0645|consen 84 TVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPTED 163 (312)
T ss_pred eEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEcCCcc
Confidence 9999987654 577889999999999999999999999999999999998744 46778899999999999999999
Q ss_pred EEEEecCCCeEEEEeCC---CceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEEC
Q psy4393 167 LIVSSSYDGLCRIWDTA---SGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225 (247)
Q Consensus 167 ~l~~~~~dg~i~v~d~~---~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~ 225 (247)
+|+++++|.+|++|+-. ..++.+++. .+...|.+++|++.|..|++++.|++++||-.
T Consensus 164 lL~S~SYDnTIk~~~~~~dddW~c~~tl~-g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~ 224 (312)
T KOG0645|consen 164 LLFSCSYDNTIKVYRDEDDDDWECVQTLD-GHENTVWSLAFDNIGSRLVSCSDDGTVSIWRL 224 (312)
T ss_pred eeEEeccCCeEEEEeecCCCCeeEEEEec-CccceEEEEEecCCCceEEEecCCcceEeeee
Confidence 99999999999999765 234555543 44458999999999999999999999999974
No 24
>KOG0265|consensus
Probab=100.00 E-value=2.7e-31 Score=195.25 Aligned_cols=204 Identities=27% Similarity=0.553 Sum_probs=180.5
Q ss_pred EecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCC-CeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCc
Q psy4393 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-GKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSG 101 (247)
Q Consensus 23 ~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~ 101 (247)
+.+|.+.|..+.|+|+|..+|+|+.|..|.+|+... .+....+++|.+.|..+.|.+|++.|++++.|.+++.||+++|
T Consensus 43 l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~~tG 122 (338)
T KOG0265|consen 43 LPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWDAETG 122 (338)
T ss_pred cCCCcceEEEEEECCCCCeEeecCCcceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecCCceEEEEecccc
Confidence 468999999999999999999999999999999653 3445677899999999999999999999999999999999999
Q ss_pred eEEEEEecCCccEEEEEEcCCC-CEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCCCeEEEE
Q psy4393 102 KCLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 180 (247)
Q Consensus 102 ~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~ 180 (247)
++.+.++.|...+..+.-..-| .++.+++.|+++++||+|....++.+.. ...++++.|...+..+.+|+-|+.|++|
T Consensus 123 ~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~~-kyqltAv~f~d~s~qv~sggIdn~ikvW 201 (338)
T KOG0265|consen 123 KRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFEN-KYQLTAVGFKDTSDQVISGGIDNDIKVW 201 (338)
T ss_pred eeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhcccc-ceeEEEEEecccccceeeccccCceeee
Confidence 9999999999988887744444 4667788999999999998887777643 4578999999999999999999999999
Q ss_pred eCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCc
Q psy4393 181 DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVV 228 (247)
Q Consensus 181 d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~ 228 (247)
|++.+.....+ .++..+|+.+..+|+|.++.+-+-|+++++||.+-.
T Consensus 202 d~r~~d~~~~l-sGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~ 248 (338)
T KOG0265|consen 202 DLRKNDGLYTL-SGHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRPF 248 (338)
T ss_pred ccccCcceEEe-ecccCceeeEEeccCCCccccccccceEEEEEeccc
Confidence 99988877665 456678999999999999999999999999998753
No 25
>KOG0295|consensus
Probab=100.00 E-value=3.8e-31 Score=198.98 Aligned_cols=204 Identities=35% Similarity=0.636 Sum_probs=190.1
Q ss_pred EEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCc
Q psy4393 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSG 101 (247)
Q Consensus 22 ~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~ 101 (247)
++.+|...|.+++|-|.|.+++++++|.+|+.|+..++.++..+.+|..-|..++.+.||..+++++.|.++++|-+.++
T Consensus 188 s~~gh~h~vS~V~f~P~gd~ilS~srD~tik~We~~tg~cv~t~~~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~ 267 (406)
T KOG0295|consen 188 SLIGHEHGVSSVFFLPLGDHILSCSRDNTIKAWECDTGYCVKTFPGHSEWVRMVRVNQDGTIIASCSNDQTLRVWVVATK 267 (406)
T ss_pred HhcCcccceeeEEEEecCCeeeecccccceeEEecccceeEEeccCchHhEEEEEecCCeeEEEecCCCceEEEEEeccc
Confidence 34589999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEecCCccEEEEEEcCC---------------CCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCC
Q psy4393 102 KCLKTLKGHSNYVFCCNFNPQ---------------SNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGS 166 (247)
Q Consensus 102 ~~~~~~~~~~~~v~~~~~~~~---------------~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~ 166 (247)
++...++.|.-++.+++|-|. +.++.+++.|+.|++||+.++.++..+.+|.+.|..++|+|.|+
T Consensus 268 ~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~ghdnwVr~~af~p~Gk 347 (406)
T KOG0295|consen 268 QCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGHDNWVRGVAFSPGGK 347 (406)
T ss_pred hhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEecccceeeeeEEcCCCe
Confidence 888889999999999999762 25899999999999999999999999999999999999999999
Q ss_pred EEEEecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECC
Q psy4393 167 LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSK 226 (247)
Q Consensus 167 ~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~ 226 (247)
+|+++..|+++++||+.++++.+.+. .+..-+++++|+.+..++++|+.|..+++|+.+
T Consensus 348 yi~ScaDDktlrvwdl~~~~cmk~~~-ah~hfvt~lDfh~~~p~VvTGsVdqt~KvwEcr 406 (406)
T KOG0295|consen 348 YILSCADDKTLRVWDLKNLQCMKTLE-AHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 406 (406)
T ss_pred EEEEEecCCcEEEEEeccceeeeccC-CCcceeEEEecCCCCceEEeccccceeeeeecC
Confidence 99999999999999999999988775 555678999999999999999999999999854
No 26
>KOG0318|consensus
Probab=100.00 E-value=3.2e-30 Score=202.27 Aligned_cols=220 Identities=27% Similarity=0.497 Sum_probs=176.5
Q ss_pred CCCceEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEe---cccCCeEEEEECCCCCEEEEEcCC
Q psy4393 14 KPNYVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS---GHKLGISDVAWSSDSRLLVSGSDD 90 (247)
Q Consensus 14 ~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d 90 (247)
-|++.-+.++..|..-|.++.|+|||+++++++.||++.+||-.+++.+..+. +|.+.|.+++|+||++++++++.|
T Consensus 177 GPPFKFk~s~r~HskFV~~VRysPDG~~Fat~gsDgki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaD 256 (603)
T KOG0318|consen 177 GPPFKFKSSFREHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSAD 256 (603)
T ss_pred CCCeeeeecccccccceeeEEECCCCCeEEEecCCccEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCC
Confidence 35577777888999999999999999999999999999999999999988887 899999999999999999999999
Q ss_pred CeEEEEECCCceEEEE-------------------------------------------EecCCccEEEEEEcCCCCEEE
Q psy4393 91 KTLKIWELSSGKCLKT-------------------------------------------LKGHSNYVFCCNFNPQSNLIV 127 (247)
Q Consensus 91 ~~i~v~d~~~~~~~~~-------------------------------------------~~~~~~~v~~~~~~~~~~~l~ 127 (247)
.++++||+.+.+++++ +.+|...|.++..+|++..|+
T Consensus 257 kt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~ 336 (603)
T KOG0318|consen 257 KTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIY 336 (603)
T ss_pred ceEEEEEeeccceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCCCEEE
Confidence 9999999876544332 235666788888888888888
Q ss_pred EeeCCCCEEEEECCCCeE-----------E--------------------------------------------------
Q psy4393 128 SGSFDESVRIWDVRTGKC-----------L-------------------------------------------------- 146 (247)
Q Consensus 128 ~~~~d~~i~v~d~~~~~~-----------~-------------------------------------------------- 146 (247)
+|+.||.|.-||..++.. +
T Consensus 337 SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d 416 (603)
T KOG0318|consen 337 SGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGMAASESGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSD 416 (603)
T ss_pred eeccCceEEEEecCCccccccccccccceEEEEeecCCCcEEEEecCCeEEEEecccCcccccceeecCCCceeEEEcCC
Confidence 888888888887643210 0
Q ss_pred ----------------------------------------------------------------EeecCCCCCeEEEEEC
Q psy4393 147 ----------------------------------------------------------------KTLPAHSDPVSAVHFN 162 (247)
Q Consensus 147 ----------------------------------------------------------------~~~~~~~~~i~~~~~~ 162 (247)
.....|.+++++++++
T Consensus 417 ~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vAv~~~~~~vaVGG~Dgkvhvysl~g~~l~ee~~~~~h~a~iT~vayS 496 (603)
T KOG0318|consen 417 GGTAVVACISDIVLLQDQTKVSSIPIGYESSAVAVSPDGSEVAVGGQDGKVHVYSLSGDELKEEAKLLEHRAAITDVAYS 496 (603)
T ss_pred CCEEEEEecCcEEEEecCCcceeeccccccceEEEcCCCCEEEEecccceEEEEEecCCcccceeeeecccCCceEEEEC
Confidence 0011244567778888
Q ss_pred CCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcceEEE
Q psy4393 163 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAII 233 (247)
Q Consensus 163 ~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~ 233 (247)
||+.+||+|...+.+.+||..+.+.......-|...|.+++|+|+.+++|+|+.|..|.||+++.....++
T Consensus 497 pd~~yla~~Da~rkvv~yd~~s~~~~~~~w~FHtakI~~~aWsP~n~~vATGSlDt~Viiysv~kP~~~i~ 567 (603)
T KOG0318|consen 497 PDGAYLAAGDASRKVVLYDVASREVKTNRWAFHTAKINCVAWSPNNKLVATGSLDTNVIIYSVKKPAKHII 567 (603)
T ss_pred CCCcEEEEeccCCcEEEEEcccCceecceeeeeeeeEEEEEeCCCceEEEeccccceEEEEEccChhhheE
Confidence 88888888888888888888777664444444678899999999999999999999999999876543333
No 27
>KOG0643|consensus
Probab=100.00 E-value=3.1e-30 Score=187.06 Aligned_cols=215 Identities=25% Similarity=0.413 Sum_probs=193.4
Q ss_pred EEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCc
Q psy4393 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSG 101 (247)
Q Consensus 22 ~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~ 101 (247)
-+.+|.++++.+.|+.+|.+|++|+.|....+|-..+++.+..+.+|.+.|.++..+.+.+.+++|+.|.++++||+++|
T Consensus 5 ~l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~tG 84 (327)
T KOG0643|consen 5 LLQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVETG 84 (327)
T ss_pred ccccCccccceEEecCCCcEEEEecCCCCceEEEecCCceeeeecCCCceEEEEEecCCcceeeeccccceeEEEEcCCC
Confidence 45689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEecCCccEEEEEEcCCCCEEEEeeCC-----CCEEEEECC-------CCeEEEeecCCCCCeEEEEECCCCCEEE
Q psy4393 102 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD-----ESVRIWDVR-------TGKCLKTLPAHSDPVSAVHFNRDGSLIV 169 (247)
Q Consensus 102 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~v~d~~-------~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 169 (247)
+.+..++. ...|..+.|++++++++....+ +.|.++|++ ..+++..+..+...++.+-|.|.+++++
T Consensus 85 k~la~~k~-~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~ii 163 (327)
T KOG0643|consen 85 KQLATWKT-NSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLGETII 163 (327)
T ss_pred cEEEEeec-CCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeecccCCEEE
Confidence 99988874 4568999999999998877653 469999998 3445777778888999999999999999
Q ss_pred EecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcceEEEEccC
Q psy4393 170 SSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTP 237 (247)
Q Consensus 170 ~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~ 237 (247)
+|..+|.|..||+++++....-...+...|+.+.+++|..++++++.|.+.++||..+...+.+|...
T Consensus 164 ~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~v~Kty~te 231 (327)
T KOG0643|consen 164 AGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTLEVLKTYTTE 231 (327)
T ss_pred EecCCCcEEEEEcccCceeeechhhhccccccccccCCcceEEecccCccceeeeccceeeEEEeeec
Confidence 99999999999999987666555566778999999999999999999999999999998888877653
No 28
>PTZ00420 coronin; Provisional
Probab=100.00 E-value=2.3e-29 Score=208.56 Aligned_cols=209 Identities=21% Similarity=0.348 Sum_probs=167.3
Q ss_pred EEEEecCCCCeEEEEECCC-CCEEEEEeCCCeEEEEecCCCe--------EEEEEecccCCeEEEEECCCCCE-EEEEcC
Q psy4393 20 KFTLAGHTKAVSSVKFSPN-GEWLASSSADKLIKIWGAYDGK--------FEKTISGHKLGISDVAWSSDSRL-LVSGSD 89 (247)
Q Consensus 20 ~~~~~~h~~~v~~~~~s~~-~~~l~~~~~dg~v~iw~~~~~~--------~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~ 89 (247)
...+.+|.+.|.+++|+|+ +.+|++|+.||.|++|++.++. ....+.+|...|.+++|+|++.. +++++.
T Consensus 67 v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~ 146 (568)
T PTZ00420 67 VIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMCSSGF 146 (568)
T ss_pred EEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECCCCCeEEEEEeC
Confidence 4567899999999999996 7899999999999999987532 23456788899999999998876 468899
Q ss_pred CCeEEEEECCCceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEE-----EEECCC
Q psy4393 90 DKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSA-----VHFNRD 164 (247)
Q Consensus 90 d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~-----~~~~~~ 164 (247)
|+.|++||+++++....+. +...+.+++|+|+|.++++++.|+.|++||+++++.+..+..|.+.+.+ ..|+++
T Consensus 147 DgtIrIWDl~tg~~~~~i~-~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i~tl~gH~g~~~s~~v~~~~fs~d 225 (568)
T PTZ00420 147 DSFVNIWDIENEKRAFQIN-MPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIASSFHIHDGGKNTKNIWIDGLGGD 225 (568)
T ss_pred CCeEEEEECCCCcEEEEEe-cCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEEEEEecccCCceeEEEEeeeEcCC
Confidence 9999999999988766665 4567999999999999999999999999999999998888888876433 234588
Q ss_pred CCEEEEecCCC----eEEEEeCCC-ceeeeeeccCC-CCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcc
Q psy4393 165 GSLIVSSSYDG----LCRIWDTAS-GQCLKTLIDDD-NPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVT 229 (247)
Q Consensus 165 ~~~l~~~~~dg----~i~v~d~~~-~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~ 229 (247)
+.++++++.++ .|++||++. .+.+....... ...+......++|.++++|+.|+.|++|+.....
T Consensus 226 ~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~D~~tg~l~lsGkGD~tIr~~e~~~~~ 296 (568)
T PTZ00420 226 DNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHYDESTGLIYLIGKGDGNCRYYQHSLGS 296 (568)
T ss_pred CCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccceEEeeeCCCCCEEEEEECCCeEEEEEccCCc
Confidence 88999887764 799999985 44444432222 2233333335568899999999999999987653
No 29
>KOG0282|consensus
Probab=100.00 E-value=3.9e-32 Score=210.84 Aligned_cols=217 Identities=29% Similarity=0.572 Sum_probs=186.3
Q ss_pred EEEEEecCCCCeEEEEECC-CCCEEEEEeCCCeEEEEecCC-CeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEE
Q psy4393 19 LKFTLAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAYD-GKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIW 96 (247)
Q Consensus 19 ~~~~~~~h~~~v~~~~~s~-~~~~l~~~~~dg~v~iw~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~ 96 (247)
+.+++.+|+..|+++.|.| .+.+|++++.|+.|+||++.+ +++++.+.+|..+|.++.|+++|..+++++-|+.+++|
T Consensus 206 ~~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlw 285 (503)
T KOG0282|consen 206 LSHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKLW 285 (503)
T ss_pred heeeccCCccccchhhhccceeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeecceeeeee
Confidence 5567889999999999999 888999999999999999876 88899999999999999999999999999999999999
Q ss_pred ECCCceEEEEEecCCccEEEEEEcCCC-CEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCCC
Q psy4393 97 ELSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 175 (247)
Q Consensus 97 d~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg 175 (247)
|+++|++...+.. ...+.|+.|.|++ +.+++|+.|+.|+.||+|+++.++....|-++|..+.|-++|+.+++.+.|+
T Consensus 286 DtETG~~~~~f~~-~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~~g~rFissSDdk 364 (503)
T KOG0282|consen 286 DTETGQVLSRFHL-DKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLGAILDITFVDEGRRFISSSDDK 364 (503)
T ss_pred ccccceEEEEEec-CCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhhhheeeeEEccCCceEeeeccCc
Confidence 9999999888774 4557899999988 8999999999999999999999888889999999999999999999999999
Q ss_pred eEEEEeCCCceeeeee---------------------------------------------ccCCC--CCeEEEEECCCC
Q psy4393 176 LCRIWDTASGQCLKTL---------------------------------------------IDDDN--PPVSFVKFSPNG 208 (247)
Q Consensus 176 ~i~v~d~~~~~~~~~~---------------------------------------------~~~~~--~~v~~~~~s~~~ 208 (247)
.+++|+.+.+-.++.. +..+. +--..+.|||||
T Consensus 365 s~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSpDG 444 (503)
T KOG0282|consen 365 SVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSPDG 444 (503)
T ss_pred cEEEEEcCCCccchhhcchhhccCcceecCCCCCeehhhccCceEEEEecccccccCHhhhhcceeccCceeeEEEcCCC
Confidence 9999998764211100 00110 112358999999
Q ss_pred CEEEEEEcCCeEEEEECCCcceEEEEcc
Q psy4393 209 KYILAATLDNTLKLWDSKVVTPAIICST 236 (247)
Q Consensus 209 ~~l~~~~~dg~i~vwd~~~~~~~~~~~~ 236 (247)
++|++|+.||.+.+||.++...+.....
T Consensus 445 ~~l~SGdsdG~v~~wdwkt~kl~~~lka 472 (503)
T KOG0282|consen 445 RTLCSGDSDGKVNFWDWKTTKLVSKLKA 472 (503)
T ss_pred CeEEeecCCccEEEeechhhhhhhcccc
Confidence 9999999999999999988665444433
No 30
>KOG0640|consensus
Probab=99.97 E-value=3.8e-30 Score=190.45 Aligned_cols=226 Identities=28% Similarity=0.505 Sum_probs=190.9
Q ss_pred CCCCCceEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCC------------------eEEEEEecccCCeE
Q psy4393 12 NPKPNYVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG------------------KFEKTISGHKLGIS 73 (247)
Q Consensus 12 ~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~------------------~~~~~~~~~~~~v~ 73 (247)
.|+|.-.....+..|..++.+.+|+|||.++|+|+.|-.|+|+|++.. ...+.+-.|-..|+
T Consensus 97 s~e~~~yEt~ylt~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn 176 (430)
T KOG0640|consen 97 SPEPSEYETKYLTSHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVN 176 (430)
T ss_pred CCCCcccceEEEeecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCccc
Confidence 355555555667789999999999999999999999999999997510 12334455777899
Q ss_pred EEEECCCCCEEEEEcCCCeEEEEECCCceEEEEEe--cCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEee--
Q psy4393 74 DVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLK--GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTL-- 149 (247)
Q Consensus 74 ~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~-- 149 (247)
++.|+|-...|++++.|++|+++|+......+.++ .....+.++.|+|.|.+++.|.....+++||+.+.++...-
T Consensus 177 ~l~FHPre~ILiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~QcfvsanP 256 (430)
T KOG0640|consen 177 DLDFHPRETILISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFVSANP 256 (430)
T ss_pred ceeecchhheEEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEeccceeEeeecCc
Confidence 99999999999999999999999997643222222 23567999999999999999999999999999998875443
Q ss_pred -cCCCCCeEEEEECCCCCEEEEecCCCeEEEEeCCCceeeeeeccCC-CCCeEEEEECCCCCEEEEEEcCCeEEEEECCC
Q psy4393 150 -PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD-NPPVSFVKFSPNGKYILAATLDNTLKLWDSKV 227 (247)
Q Consensus 150 -~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~ 227 (247)
..|.+.|+++.+++.+++.++++.||.|++||--+++++.++...+ +..|....|..+|+|+++.+.|..+++|++.+
T Consensus 257 d~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t 336 (430)
T KOG0640|consen 257 DDQHTGAITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEIST 336 (430)
T ss_pred ccccccceeEEEecCCccEEEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEEccCCeEEeecCCcceeeeeeecC
Confidence 3577899999999999999999999999999999999888876654 46788899999999999999999999999999
Q ss_pred cceEEEEccC
Q psy4393 228 VTPAIICSTP 237 (247)
Q Consensus 228 ~~~~~~~~~~ 237 (247)
+.++.+|.+.
T Consensus 337 ~R~l~~YtGA 346 (430)
T KOG0640|consen 337 GRMLKEYTGA 346 (430)
T ss_pred CceEEEEecC
Confidence 9999998775
No 31
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.97 E-value=1.5e-28 Score=190.41 Aligned_cols=216 Identities=40% Similarity=0.742 Sum_probs=190.2
Q ss_pred EEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCC
Q psy4393 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSS 100 (247)
Q Consensus 21 ~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~ 100 (247)
..+..|...+..+.|+|+++++++++.+|.+++|+..+++....+..+...+.++.|+++++.+++++.++.+.+||+.+
T Consensus 45 ~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 124 (289)
T cd00200 45 RTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVET 124 (289)
T ss_pred EEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcCcccceEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCC
Confidence 44567888999999999999999999999999999988777778888888899999999988888888899999999998
Q ss_pred ceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCCCeEEEE
Q psy4393 101 GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 180 (247)
Q Consensus 101 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~ 180 (247)
++....+..+...+.++.|+|++.++++++.++.+++||++.++.+..+..|...+.++.|+|++..+++++.++.+.+|
T Consensus 125 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~ 204 (289)
T cd00200 125 GKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLW 204 (289)
T ss_pred cEEEEEeccCCCcEEEEEEcCcCCEEEEEcCCCcEEEEEccccccceeEecCccccceEEECCCcCEEEEecCCCcEEEE
Confidence 88888888888889999999999999988889999999999888888888888899999999999999999999999999
Q ss_pred eCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcceEEEEccC
Q psy4393 181 DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTP 237 (247)
Q Consensus 181 d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~ 237 (247)
|+..++....+. .+...+..+.|+|++.++++++.||.|++||.+...+...+..+
T Consensus 205 d~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~ 260 (289)
T cd00200 205 DLSTGKCLGTLR-GHENGVNSVAFSPDGYLLASGSEDGTIRVWDLRTGECVQTLSGH 260 (289)
T ss_pred ECCCCceecchh-hcCCceEEEEEcCCCcEEEEEcCCCcEEEEEcCCceeEEEcccc
Confidence 999877665542 34457899999999888888888999999999987776666543
No 32
>KOG0273|consensus
Probab=99.97 E-value=9.1e-30 Score=197.27 Aligned_cols=213 Identities=27% Similarity=0.484 Sum_probs=189.2
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceEEEE
Q psy4393 27 TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKT 106 (247)
Q Consensus 27 ~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~ 106 (247)
...|++++|+.+|..||+|+.||.+++|+. ++.....+..|.++|.++.|+..|.+|++++.|+++.+||..++.....
T Consensus 235 nkdVT~L~Wn~~G~~LatG~~~G~~riw~~-~G~l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~q~ 313 (524)
T KOG0273|consen 235 NKDVTSLDWNNDGTLLATGSEDGEARIWNK-DGNLISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVKQQ 313 (524)
T ss_pred cCCcceEEecCCCCeEEEeecCcEEEEEec-CchhhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceEEEe
Confidence 467999999999999999999999999986 6777788899999999999999999999999999999999999998888
Q ss_pred EecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCCCeEEEEeCCCce
Q psy4393 107 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 186 (247)
Q Consensus 107 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~ 186 (247)
+..|..+...+.|-.+ ..+++++.|+.|+|+-+....++..+..|.++|.++.|+|.+.+|++++.|+++++|......
T Consensus 314 f~~~s~~~lDVdW~~~-~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~ 392 (524)
T KOG0273|consen 314 FEFHSAPALDVDWQSN-DEFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSN 392 (524)
T ss_pred eeeccCCccceEEecC-ceEeecCCCceEEEEEecCCCcceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCCc
Confidence 8878777667788654 568999999999999999888999999999999999999999999999999999999987766
Q ss_pred eeeeeccCCCCCeEEEEECCCC---------CEEEEEEcCCeEEEEECCCcceEEEEccCCcccc
Q psy4393 187 CLKTLIDDDNPPVSFVKFSPNG---------KYILAATLDNTLKLWDSKVVTPAIICSTPLNLNY 242 (247)
Q Consensus 187 ~~~~~~~~~~~~v~~~~~s~~~---------~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~ 242 (247)
....+ ..+...|..+.|+|.| ..+++++.|++|++||...+.|+-++..+.++.|
T Consensus 393 ~~~~l-~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~kH~~pVy 456 (524)
T KOG0273|consen 393 SVHDL-QAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMKHQEPVY 456 (524)
T ss_pred chhhh-hhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeeccCCCceE
Confidence 55544 3455667888999864 4889999999999999999999999988888765
No 33
>KOG0291|consensus
Probab=99.97 E-value=2.1e-29 Score=205.13 Aligned_cols=210 Identities=26% Similarity=0.546 Sum_probs=185.7
Q ss_pred ceEEEEEecCCCCeEEEEECCCCCEEEEEe-CCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEE
Q psy4393 17 YVLKFTLAGHTKAVSSVKFSPNGEWLASSS-ADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKI 95 (247)
Q Consensus 17 ~~~~~~~~~h~~~v~~~~~s~~~~~l~~~~-~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v 95 (247)
+.+...+.--..+|..++|+..|.+||.|+ .-|.+.||+......+-+..+|...+++++++|||+++++|+.||.|++
T Consensus 297 f~lih~LSis~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsEsYVlKQQgH~~~i~~l~YSpDgq~iaTG~eDgKVKv 376 (893)
T KOG0291|consen 297 FNLIHSLSISDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSESYVLKQQGHSDRITSLAYSPDGQLIATGAEDGKVKV 376 (893)
T ss_pred ceEEEEeecccceeeEEEecccCCEEEEcCCccceEEEEEeeccceeeeccccccceeeEEECCCCcEEEeccCCCcEEE
Confidence 334444433346899999999999999865 4589999999888888888999999999999999999999999999999
Q ss_pred EECCCceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCC-CCeEEEEECCCCCEEEEecCC
Q psy4393 96 WELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHS-DPVSAVHFNRDGSLIVSSSYD 174 (247)
Q Consensus 96 ~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~-~~i~~~~~~~~~~~l~~~~~d 174 (247)
||...+-|..++..|.+.|..+.|+..++.+++.+-||+|+.||+...+..+.+.... ....|++.+|.|.++.+|+.|
T Consensus 377 Wn~~SgfC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~p~QfscvavD~sGelV~AG~~d 456 (893)
T KOG0291|consen 377 WNTQSGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEPIQFSCVAVDPSGELVCAGAQD 456 (893)
T ss_pred EeccCceEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeecccceeeeecCCCceeeeEEEEcCCCCEEEeeccc
Confidence 9999999999999999999999999999999999999999999999998888886532 346789999999999999988
Q ss_pred C-eEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCC
Q psy4393 175 G-LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKV 227 (247)
Q Consensus 175 g-~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~ 227 (247)
. .|.+|++.+|+.+.. ..+|.+||.+++|+|++..|++++.|.+|++||.-.
T Consensus 457 ~F~IfvWS~qTGqllDi-LsGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~ 509 (893)
T KOG0291|consen 457 SFEIFVWSVQTGQLLDI-LSGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFS 509 (893)
T ss_pred eEEEEEEEeecCeeeeh-hcCCCCcceeeEEccccCeEEeccccceEEEEEeec
Confidence 6 799999999997765 456778999999999999999999999999999743
No 34
>KOG0296|consensus
Probab=99.97 E-value=1.5e-29 Score=190.48 Aligned_cols=221 Identities=21% Similarity=0.368 Sum_probs=186.2
Q ss_pred EEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEEC
Q psy4393 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWEL 98 (247)
Q Consensus 19 ~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~ 98 (247)
..+.+.+|...|+++.|+.+|.+||+|+.+|.|+||...++.....+...-..+.-+.|+|-+..+++|+.||.+.+|.+
T Consensus 98 ~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~stg~~~~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~i 177 (399)
T KOG0296|consen 98 FAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTGGEQWKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQI 177 (399)
T ss_pred ceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEcccCceEEEeecccCceEEEEecccccEEEeecCCCcEEEEEC
Confidence 45678899999999999999999999999999999999999988888766677889999999999999999999999999
Q ss_pred CCceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCC-------------------------
Q psy4393 99 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHS------------------------- 153 (247)
Q Consensus 99 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~------------------------- 153 (247)
.++...+.+.+|..++.+=.|.|+|+.++++..||+|++||+.+++++..+....
T Consensus 178 p~~~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~dgti~~Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~ 257 (399)
T KOG0296|consen 178 PSQALCKVMSGHNSPCTCGEFIPDGKRILTGYDDGTIIVWNPKTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVA 257 (399)
T ss_pred CCcceeeEecCCCCCcccccccCCCceEEEEecCceEEEEecCCCceeEEecccccCcCCccccccccceeEeccCCccE
Confidence 9877788899999999999999999999999999999999999988766554100
Q ss_pred --------------------------CCeEEEE---ECCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEE
Q psy4393 154 --------------------------DPVSAVH---FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKF 204 (247)
Q Consensus 154 --------------------------~~i~~~~---~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~ 204 (247)
..+.++. ++..-.+.|+|+-||.|.+||+...+..+.. .+..+|..+.|
T Consensus 258 ~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~lpL~A~G~vdG~i~iyD~a~~~~R~~c--~he~~V~~l~w 335 (399)
T KOG0296|consen 258 CGVNNGSGKVVNCNNGTVPELKPSQEELDESVESIPSSSKLPLAACGSVDGTIAIYDLAASTLRHIC--EHEDGVTKLKW 335 (399)
T ss_pred EEEccccceEEEecCCCCccccccchhhhhhhhhcccccccchhhcccccceEEEEecccchhheec--cCCCceEEEEE
Confidence 0011122 2223346788999999999999877654433 34556999999
Q ss_pred CCCCCEEEEEEcCCeEEEEECCCcceEEEEccCCcccc
Q psy4393 205 SPNGKYILAATLDNTLKLWDSKVVTPAIICSTPLNLNY 242 (247)
Q Consensus 205 s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~ 242 (247)
-+ ..+|++++.+|.|+.||.++++.+.+|..+....+
T Consensus 336 ~~-t~~l~t~c~~g~v~~wDaRtG~l~~~y~GH~~~Il 372 (399)
T KOG0296|consen 336 LN-TDYLLTACANGKVRQWDARTGQLKFTYTGHQMGIL 372 (399)
T ss_pred cC-cchheeeccCceEEeeeccccceEEEEecCchhee
Confidence 99 78999999999999999999999999999876543
No 35
>KOG0315|consensus
Probab=99.97 E-value=8.3e-29 Score=178.06 Aligned_cols=200 Identities=24% Similarity=0.534 Sum_probs=170.8
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCe--EEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceEE
Q psy4393 27 TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK--FEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCL 104 (247)
Q Consensus 27 ~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~ 104 (247)
.+.|..+...|+++.||+++ ...|++||+.+++ .+..+.+|...|+.+.|..+|+.++++++||+++|||++...+.
T Consensus 40 dsqVNrLeiTpdk~~LAaa~-~qhvRlyD~~S~np~Pv~t~e~h~kNVtaVgF~~dgrWMyTgseDgt~kIWdlR~~~~q 118 (311)
T KOG0315|consen 40 DSQVNRLEITPDKKDLAAAG-NQHVRLYDLNSNNPNPVATFEGHTKNVTAVGFQCDGRWMYTGSEDGTVKIWDLRSLSCQ 118 (311)
T ss_pred ccceeeEEEcCCcchhhhcc-CCeeEEEEccCCCCCceeEEeccCCceEEEEEeecCeEEEecCCCceEEEEeccCcccc
Confidence 46799999999999999876 4579999997654 57788899999999999999999999999999999999986666
Q ss_pred EEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEee-cCCCCCeEEEEECCCCCEEEEecCCCeEEEEeCC
Q psy4393 105 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTL-PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA 183 (247)
Q Consensus 105 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~ 183 (247)
+.++ +.++|.++..+|+...|++|..+|.|++||+....+...+ +....++.++...|||..++++...|...+|++-
T Consensus 119 R~~~-~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~liPe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~ 197 (311)
T KOG0315|consen 119 RNYQ-HNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHELIPEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLL 197 (311)
T ss_pred hhcc-CCCCcceEEecCCcceEEeecCCCcEEEEEccCCccccccCCCCCcceeeEEEcCCCcEEEEecCCccEEEEEcc
Confidence 6555 5689999999999999999999999999999987655543 3445689999999999999999999999999987
Q ss_pred Cceeeeee-----ccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCc
Q psy4393 184 SGQCLKTL-----IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVV 228 (247)
Q Consensus 184 ~~~~~~~~-----~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~ 228 (247)
+.+....+ +..+..-+..+.+|||+++||+++.|.+++||+..+.
T Consensus 198 ~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~~~ 247 (311)
T KOG0315|consen 198 NHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSDKTVKIWNTDDF 247 (311)
T ss_pred CCCccccceEhhheecccceEEEEEECCCCcEEEeecCCceEEEEecCCc
Confidence 65432222 2345667788899999999999999999999999887
No 36
>KOG0289|consensus
Probab=99.97 E-value=3.5e-29 Score=192.35 Aligned_cols=217 Identities=25% Similarity=0.426 Sum_probs=192.3
Q ss_pred EEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECC
Q psy4393 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELS 99 (247)
Q Consensus 20 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~ 99 (247)
..+++||...|+.+.|+|+...+++++.|..|+||.............|..+|+.+..+|.|.++++++.|+...+.|++
T Consensus 254 l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~s~~~~~~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~ 333 (506)
T KOG0289|consen 254 LATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLSSEPTSSRPHEEPVTGLSLHPTGEYLLSASNDGTWAFSDIS 333 (506)
T ss_pred hhhccCcceEEEEEEeccchhheeecCCcceEEeeccccccCccccccccccceeeeeccCCcEEEEecCCceEEEEEcc
Confidence 34678999999999999999999999999999999988777777888899999999999999999999999999999999
Q ss_pred CceEEEEEecC--CccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCCCeE
Q psy4393 100 SGKCLKTLKGH--SNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 177 (247)
Q Consensus 100 ~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i 177 (247)
++..+...... .-.+.+..|+|||.++.+|..|+.+++||+.++..+..|..|.++|..++|+.+|-+|++++.|+.|
T Consensus 334 ~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks~~~~a~Fpght~~vk~i~FsENGY~Lat~add~~V 413 (506)
T KOG0289|consen 334 SGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKSQTNVAKFPGHTGPVKAISFSENGYWLATAADDGSV 413 (506)
T ss_pred CCcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEEEEcCCccccccCCCCCCceeEEEeccCceEEEEEecCCeE
Confidence 99877666542 2347889999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCc--ceEEEEcc
Q psy4393 178 RIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVV--TPAIICST 236 (247)
Q Consensus 178 ~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~--~~~~~~~~ 236 (247)
++||++..+..+++.......+..+.|++.|++|+.++.|=+|++++.+.+ +.+..+..
T Consensus 414 ~lwDLRKl~n~kt~~l~~~~~v~s~~fD~SGt~L~~~g~~l~Vy~~~k~~k~W~~~~~~~~ 474 (506)
T KOG0289|consen 414 KLWDLRKLKNFKTIQLDEKKEVNSLSFDQSGTYLGIAGSDLQVYICKKKTKSWTEIKELAD 474 (506)
T ss_pred EEEEehhhcccceeeccccccceeEEEcCCCCeEEeecceeEEEEEecccccceeeehhhh
Confidence 999999988888887777778999999999999999988888888885543 34444333
No 37
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.97 E-value=3.9e-28 Score=213.28 Aligned_cols=212 Identities=23% Similarity=0.434 Sum_probs=174.1
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCC----e----EEEEEecccCCeEEEEECC-CCCEEEEEcCCCeEEE
Q psy4393 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG----K----FEKTISGHKLGISDVAWSS-DSRLLVSGSDDKTLKI 95 (247)
Q Consensus 25 ~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~----~----~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~v 95 (247)
.|...|.+++|+|+|+++++|+.|+.|++|+.... . ....+. +...+.+++|++ ++..+++++.||.|++
T Consensus 481 ~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~~las~~~Dg~v~l 559 (793)
T PLN00181 481 NSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELA-SRSKLSGICWNSYIKSQVASSNFEGVVQV 559 (793)
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEec-ccCceeeEEeccCCCCEEEEEeCCCeEEE
Confidence 48899999999999999999999999999997431 1 112222 345788999987 4788999999999999
Q ss_pred EECCCceEEEEEecCCccEEEEEEcC-CCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEEC-CCCCEEEEecC
Q psy4393 96 WELSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFN-RDGSLIVSSSY 173 (247)
Q Consensus 96 ~d~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~-~~~~~l~~~~~ 173 (247)
||+.+++.+..+.+|...|.+++|+| ++.++++|+.|+.|++||++++..+..+..+ ..+.++.|+ +++.++++|+.
T Consensus 560 Wd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~~-~~v~~v~~~~~~g~~latgs~ 638 (793)
T PLN00181 560 WDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTK-ANICCVQFPSESGRSLAFGSA 638 (793)
T ss_pred EECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEecC-CCeEEEEEeCCCCCEEEEEeC
Confidence 99999998889999999999999997 7889999999999999999998888777654 578899995 57899999999
Q ss_pred CCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCc------ceEEEEccCCc
Q psy4393 174 DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVV------TPAIICSTPLN 239 (247)
Q Consensus 174 dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~------~~~~~~~~~~~ 239 (247)
||.|++||+++.+........+...|..+.|. ++.+|++++.|+.|++||.+.. .++..+..+..
T Consensus 639 dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~-~~~~lvs~s~D~~ikiWd~~~~~~~~~~~~l~~~~gh~~ 709 (793)
T PLN00181 639 DHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFV-DSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTN 709 (793)
T ss_pred CCeEEEEECCCCCccceEecCCCCCEEEEEEe-CCCEEEEEECCCEEEEEeCCCCccccCCcceEEEcCCCC
Confidence 99999999987653222234566789999997 6789999999999999998742 45555554433
No 38
>KOG0296|consensus
Probab=99.97 E-value=2.2e-28 Score=184.28 Aligned_cols=216 Identities=21% Similarity=0.386 Sum_probs=198.6
Q ss_pred EEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECC
Q psy4393 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELS 99 (247)
Q Consensus 20 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~ 99 (247)
..++..|+.+|.+++.+|+.+++++|+.|..-.+|++.++.....+.+|+..|+++.|+.+|.+|+||+-+|.|++|+..
T Consensus 57 ~~tF~~H~~svFavsl~P~~~l~aTGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~s 136 (399)
T KOG0296|consen 57 LVTFDKHTDSVFAVSLHPNNNLVATGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVS 136 (399)
T ss_pred eeehhhcCCceEEEEeCCCCceEEecCCCceEEEEEccCCcceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEcc
Confidence 35677899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCCCeEEE
Q psy4393 100 SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 179 (247)
Q Consensus 100 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v 179 (247)
++.....+......+..+.|+|.+..+++|+.||.+-+|.+.++...+.+..|..++++=.|.|+|+.++++..||+|++
T Consensus 137 tg~~~~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~dgti~~ 216 (399)
T KOG0296|consen 137 TGGEQWKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQALCKVMSGHNSPCTCGEFIPDGKRILTGYDDGTIIV 216 (399)
T ss_pred cCceEEEeecccCceEEEEecccccEEEeecCCCcEEEEECCCcceeeEecCCCCCcccccccCCCceEEEEecCceEEE
Confidence 99888777666677888999999999999999999999999998778889999999999999999999999999999999
Q ss_pred EeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcceEEEEc
Q psy4393 180 WDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICS 235 (247)
Q Consensus 180 ~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 235 (247)
||+.+++++......+.....++.++..+..++.|..++.+++-...+++.+...+
T Consensus 217 Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n 272 (399)
T KOG0296|consen 217 WNPKTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNN 272 (399)
T ss_pred EecCCCceeEEecccccCcCCccccccccceeEeccCCccEEEEccccceEEEecC
Confidence 99999999888776666677889999999999999999999999888887766655
No 39
>KOG0283|consensus
Probab=99.97 E-value=5.8e-29 Score=204.62 Aligned_cols=209 Identities=28% Similarity=0.566 Sum_probs=171.5
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCC--------------------------------C-------------
Q psy4393 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD--------------------------------G------------- 59 (247)
Q Consensus 25 ~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~--------------------------------~------------- 59 (247)
.|.+.|.++.|++||++||+|++|+.|+||.+.. .
T Consensus 265 ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~~~~~~ 344 (712)
T KOG0283|consen 265 AHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSSRKGSQ 344 (712)
T ss_pred ccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCccccccccccccccccccccC
Confidence 7999999999999999999999999999997644 0
Q ss_pred ---------------eEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceEEEEEecCCccEEEEEEcC-CC
Q psy4393 60 ---------------KFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNP-QS 123 (247)
Q Consensus 60 ---------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~-~~ 123 (247)
+....+.+|...|.++.|+.+ ++|++++.|.++++|++....+++.|. |.+.|+|++|+| |.
T Consensus 345 s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn-~fLLSSSMDKTVRLWh~~~~~CL~~F~-HndfVTcVaFnPvDD 422 (712)
T KOG0283|consen 345 SPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKN-NFLLSSSMDKTVRLWHPGRKECLKVFS-HNDFVTCVAFNPVDD 422 (712)
T ss_pred CccccCCCccccccccchhhhhccchhheecccccC-CeeEeccccccEEeecCCCcceeeEEe-cCCeeEEEEecccCC
Confidence 001224467788999999975 589999999999999999999998776 889999999999 77
Q ss_pred CEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCCCeEEEEeCCCceeeeeeccC-------CC
Q psy4393 124 NLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD-------DN 196 (247)
Q Consensus 124 ~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~-------~~ 196 (247)
++|++|+-|+.++||++...+.+.-... ..-|++++|.|||+..++|+.+|.+++|+....+........ ..
T Consensus 423 ryFiSGSLD~KvRiWsI~d~~Vv~W~Dl-~~lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~~~~Kk~~~ 501 (712)
T KOG0283|consen 423 RYFISGSLDGKVRLWSISDKKVVDWNDL-RDLITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRLHNKKKKQG 501 (712)
T ss_pred CcEeecccccceEEeecCcCeeEeehhh-hhhheeEEeccCCceEEEEEeccEEEEEEccCCeEEEeeeEeeccCccccC
Confidence 8999999999999999987765554444 368999999999999999999999999999887765443211 12
Q ss_pred CCeEEEEECCCCC-EEEEEEcCCeEEEEECCCcceEEEEcc
Q psy4393 197 PPVSFVKFSPNGK-YILAATLDNTLKLWDSKVVTPAIICST 236 (247)
Q Consensus 197 ~~v~~~~~s~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~ 236 (247)
..|+.+.|.|... .|++.+.|.+|||||.++..++..+-+
T Consensus 502 ~rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~lv~KfKG 542 (712)
T KOG0283|consen 502 KRITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKDLVHKFKG 542 (712)
T ss_pred ceeeeeEecCCCCCeEEEecCCCceEEEeccchhhhhhhcc
Confidence 3699999987544 588888899999999977655544433
No 40
>KOG0316|consensus
Probab=99.97 E-value=1.1e-28 Score=176.14 Aligned_cols=219 Identities=25% Similarity=0.412 Sum_probs=187.9
Q ss_pred eEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEE
Q psy4393 18 VLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWE 97 (247)
Q Consensus 18 ~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d 97 (247)
.+-.++.+|...|..++.+.|...+++|+.|..+.+||+.+++....+.+|...|+.+.|+.+...+++|+-|..+++||
T Consensus 50 ~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~TGkv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wD 129 (307)
T KOG0316|consen 50 ALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVNTGKVDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWD 129 (307)
T ss_pred ceeeeecCCCceeeeccccccccccccCCCCceEEEEEcccCeeeeecccccceeeEEEecCcceEEEeccccceeEEEE
Confidence 34567789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCc--eEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCCC
Q psy4393 98 LSSG--KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 175 (247)
Q Consensus 98 ~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg 175 (247)
.+.. ++++.+....+.|.++..+ +..|++|+.||+++.||++.|+...... ..||++++|+++++..++++.|+
T Consensus 130 CRS~s~ePiQildea~D~V~Si~v~--~heIvaGS~DGtvRtydiR~G~l~sDy~--g~pit~vs~s~d~nc~La~~l~s 205 (307)
T KOG0316|consen 130 CRSRSFEPIQILDEAKDGVSSIDVA--EHEIVAGSVDGTVRTYDIRKGTLSSDYF--GHPITSVSFSKDGNCSLASSLDS 205 (307)
T ss_pred cccCCCCccchhhhhcCceeEEEec--ccEEEeeccCCcEEEEEeecceeehhhc--CCcceeEEecCCCCEEEEeeccc
Confidence 8764 5666777777778777766 5689999999999999999998655443 45899999999999999999999
Q ss_pred eEEEEeCCCceeeeeeccCCCCCe-EEEEECCCCCEEEEEEcCCeEEEEECCCcceEEEEccCCcc
Q psy4393 176 LCRIWDTASGQCLKTLIDDDNPPV-SFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTPLNL 240 (247)
Q Consensus 176 ~i~v~d~~~~~~~~~~~~~~~~~v-~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~ 240 (247)
.+++.|-.+++.++.+..+.+... ..++++....++++|++||.|.+||+-+...+..+..+..+
T Consensus 206 tlrLlDk~tGklL~sYkGhkn~eykldc~l~qsdthV~sgSEDG~Vy~wdLvd~~~~sk~~~~~~v 271 (307)
T KOG0316|consen 206 TLRLLDKETGKLLKSYKGHKNMEYKLDCCLNQSDTHVFSGSEDGKVYFWDLVDETQISKLSVVSTV 271 (307)
T ss_pred eeeecccchhHHHHHhcccccceeeeeeeecccceeEEeccCCceEEEEEeccceeeeeeccCCce
Confidence 999999999998887755443322 23567888889999999999999999888777666655544
No 41
>PTZ00421 coronin; Provisional
Probab=99.97 E-value=1.6e-27 Score=196.51 Aligned_cols=203 Identities=22% Similarity=0.377 Sum_probs=165.0
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEE-------------EEEecccCCeEEEEECC-CCCEEEEEcCCCe
Q psy4393 27 TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE-------------KTISGHKLGISDVAWSS-DSRLLVSGSDDKT 92 (247)
Q Consensus 27 ~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~-------------~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~ 92 (247)
-..|.....++++..+++++.+.....|+...+... ..+.+|...|.+++|+| ++++|++++.|+.
T Consensus 20 ~~~i~~~~~~~d~~~~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSgS~Dgt 99 (493)
T PTZ00421 20 FLNVTPSTALWDCSNTIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTASEDGT 99 (493)
T ss_pred eeccccccccCCCCCcEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEEeCCCE
Confidence 345555666777666677777766677765433221 23678899999999999 8889999999999
Q ss_pred EEEEECCCc-------eEEEEEecCCccEEEEEEcCCC-CEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCC
Q psy4393 93 LKIWELSSG-------KCLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRD 164 (247)
Q Consensus 93 i~v~d~~~~-------~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~ 164 (247)
|++||+.++ ..+..+.+|...|.+++|+|++ +++++++.|+.|++||+++++.+..+..|...|.+++|+|+
T Consensus 100 IkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~h~~~V~sla~spd 179 (493)
T PTZ00421 100 IMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKCHSDQITSLEWNLD 179 (493)
T ss_pred EEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEEcCCCCceEEEEEECC
Confidence 999999764 2456788899999999999975 69999999999999999999988889899999999999999
Q ss_pred CCEEEEecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEE----cCCeEEEEECCCcc
Q psy4393 165 GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT----LDNTLKLWDSKVVT 229 (247)
Q Consensus 165 ~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~----~dg~i~vwd~~~~~ 229 (247)
+.+|++++.|+.|++||+++++.+..+..+.......+.|.+++..+++++ .|+.|++||.+...
T Consensus 180 G~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~ 248 (493)
T PTZ00421 180 GSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMA 248 (493)
T ss_pred CCEEEEecCCCEEEEEECCCCcEEEEEecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCC
Confidence 999999999999999999998877666544334445678999888887654 47899999998653
No 42
>KOG0318|consensus
Probab=99.97 E-value=8.9e-28 Score=188.62 Aligned_cols=217 Identities=24% Similarity=0.425 Sum_probs=183.2
Q ss_pred EEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCe--EEEEEecccCCeEEEEECCCCCEEEEEcCC----CeE
Q psy4393 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK--FEKTISGHKLGISDVAWSSDSRLLVSGSDD----KTL 93 (247)
Q Consensus 20 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i 93 (247)
...+.+|...++-.+|+|.|.++|+|...|.|+|||..... +..++....++|.+++|++++++|++.++. |.+
T Consensus 52 ~~iYtEH~~~vtVAkySPsG~yiASGD~sG~vRIWdtt~~~hiLKnef~v~aG~I~Di~Wd~ds~RI~avGEGrerfg~~ 131 (603)
T KOG0318|consen 52 VDIYTEHAHQVTVAKYSPSGFYIASGDVSGKVRIWDTTQKEHILKNEFQVLAGPIKDISWDFDSKRIAAVGEGRERFGHV 131 (603)
T ss_pred eeeeccccceeEEEEeCCCceEEeecCCcCcEEEEeccCcceeeeeeeeecccccccceeCCCCcEEEEEecCccceeEE
Confidence 34456799999999999999999999999999999976532 344566667889999999999999887653 345
Q ss_pred EEEECCCceEEEEEecCCccEEEEEEcCCCC-EEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEec
Q psy4393 94 KIWELSSGKCLKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSS 172 (247)
Q Consensus 94 ~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 172 (247)
.+|| ++..+..+.+|...+.+++|-|... .+++|++|+.+.+|+-...+-...+..|...|.|+.|+|||.++++++
T Consensus 132 F~~D--SG~SvGei~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGPPFKFk~s~r~HskFV~~VRysPDG~~Fat~g 209 (603)
T KOG0318|consen 132 FLWD--SGNSVGEITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGPPFKFKSSFREHSKFVNCVRYSPDGSRFATAG 209 (603)
T ss_pred EEec--CCCccceeeccceeEeeeeccCCCceEEEeccCCCeEEEeeCCCeeeeecccccccceeeEEECCCCCeEEEec
Confidence 5666 5667788999999999999998654 589999999999999776666667788999999999999999999999
Q ss_pred CCCeEEEEeCCCceeeeeec--cCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcceEEEEccCC
Q psy4393 173 YDGLCRIWDTASGQCLKTLI--DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTPL 238 (247)
Q Consensus 173 ~dg~i~v~d~~~~~~~~~~~--~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~ 238 (247)
.||++.+||-.+++.+..+. ..+.+.|..++|+||++.+++++.|.+++|||..+.....++.-..
T Consensus 210 sDgki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv~t~~~~~ 277 (603)
T KOG0318|consen 210 SDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTNSLVSTWPMGS 277 (603)
T ss_pred CCccEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEeeccceEEEeecCC
Confidence 99999999999999887775 2567889999999999999999999999999998876665554433
No 43
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.97 E-value=1.4e-27 Score=209.86 Aligned_cols=206 Identities=27% Similarity=0.445 Sum_probs=175.7
Q ss_pred CCCCeEEEEECC-CCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECC-CCCEEEEEcCCCeEEEEECCCceE
Q psy4393 26 HTKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS-DSRLLVSGSDDKTLKIWELSSGKC 103 (247)
Q Consensus 26 h~~~v~~~~~s~-~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~v~d~~~~~~ 103 (247)
+...|.+++|++ ++.+|++++.||.|++||..+++....+.+|...|.+++|+| ++.+|++++.|+.|++||+.++..
T Consensus 531 ~~~~v~~l~~~~~~~~~las~~~Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~ 610 (793)
T PLN00181 531 SRSKLSGICWNSYIKSQVASSNFEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVS 610 (793)
T ss_pred ccCceeeEEeccCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcE
Confidence 346789999987 478999999999999999998888888899999999999997 788999999999999999999888
Q ss_pred EEEEecCCccEEEEEEc-CCCCEEEEeeCCCCEEEEECCCCe-EEEeecCCCCCeEEEEECCCCCEEEEecCCCeEEEEe
Q psy4393 104 LKTLKGHSNYVFCCNFN-PQSNLIVSGSFDESVRIWDVRTGK-CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181 (247)
Q Consensus 104 ~~~~~~~~~~v~~~~~~-~~~~~l~~~~~d~~i~v~d~~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d 181 (247)
+..+..+ ..+.++.|+ +++..+++|+.|+.|++||++... .+..+..|...|.++.|. ++..+++++.|+.|++||
T Consensus 611 ~~~~~~~-~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~-~~~~lvs~s~D~~ikiWd 688 (793)
T PLN00181 611 IGTIKTK-ANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFV-DSSTLVSSSTDNTLKLWD 688 (793)
T ss_pred EEEEecC-CCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCccceEecCCCCCEEEEEEe-CCCEEEEEECCCEEEEEe
Confidence 8777754 568888884 578999999999999999998765 466778899999999997 678899999999999999
Q ss_pred CCCc------eeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcceEEEE
Q psy4393 182 TASG------QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIIC 234 (247)
Q Consensus 182 ~~~~------~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 234 (247)
++.+ +.+..+ ..+...+..++|+|++++|++|+.||.|++|+.....++..+
T Consensus 689 ~~~~~~~~~~~~l~~~-~gh~~~i~~v~~s~~~~~lasgs~D~~v~iw~~~~~~~~~s~ 746 (793)
T PLN00181 689 LSMSISGINETPLHSF-MGHTNVKNFVGLSVSDGYIATGSETNEVFVYHKAFPMPVLSY 746 (793)
T ss_pred CCCCccccCCcceEEE-cCCCCCeeEEEEcCCCCEEEEEeCCCEEEEEECCCCCceEEE
Confidence 9743 233333 345567888999999999999999999999998776655443
No 44
>KOG0310|consensus
Probab=99.97 E-value=7.5e-29 Score=192.85 Aligned_cols=201 Identities=30% Similarity=0.555 Sum_probs=171.2
Q ss_pred CCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCC-CEEEEEcCCCeEEEEECCCceEE
Q psy4393 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS-RLLVSGSDDKTLKIWELSSGKCL 104 (247)
Q Consensus 26 h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~v~d~~~~~~~ 104 (247)
....|.++.|-.||++|++|+..|.|+++|..+...+..+..|..++....|+|++ ..+++|++|+.+++||+.+....
T Consensus 67 Fk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~ 146 (487)
T KOG0310|consen 67 FKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKSRVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQ 146 (487)
T ss_pred hccceeEEEeecCCeEEEccCCcCcEEEeccccHHHHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEE
Confidence 45779999999999999999999999999965545566778899999999999965 56778888999999999988876
Q ss_pred EEEecCCccEEEEEEcCCC-CEEEEeeCCCCEEEEECCCCe-EEEeecCCCCCeEEEEECCCCCEEEEecCCCeEEEEeC
Q psy4393 105 KTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVRTGK-CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 182 (247)
Q Consensus 105 ~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~v~d~~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~ 182 (247)
..+.+|.+.|.|.+|+|.. .++++|+-||.|++||+++.. .+.++ .|..||..+.+-|.|..+++++ ...+++||+
T Consensus 147 ~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~el-nhg~pVe~vl~lpsgs~iasAg-Gn~vkVWDl 224 (487)
T KOG0310|consen 147 AELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRVVEL-NHGCPVESVLALPSGSLIASAG-GNSVKVWDL 224 (487)
T ss_pred EEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCCceeEEe-cCCCceeeEEEcCCCCEEEEcC-CCeEEEEEe
Confidence 6889999999999999964 588999999999999999874 44444 6788999999999999998876 568999999
Q ss_pred CCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCc
Q psy4393 183 ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVV 228 (247)
Q Consensus 183 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~ 228 (247)
.+|..+......|...|+|+.+..++..|++++.|+.+++||..+.
T Consensus 225 ~~G~qll~~~~~H~KtVTcL~l~s~~~rLlS~sLD~~VKVfd~t~~ 270 (487)
T KOG0310|consen 225 TTGGQLLTSMFNHNKTVTCLRLASDSTRLLSGSLDRHVKVFDTTNY 270 (487)
T ss_pred cCCceehhhhhcccceEEEEEeecCCceEeecccccceEEEEccce
Confidence 8665444444446778999999999999999999999999996543
No 45
>KOG0645|consensus
Probab=99.97 E-value=1.2e-27 Score=174.00 Aligned_cols=203 Identities=31% Similarity=0.555 Sum_probs=174.9
Q ss_pred ceEEEEE-ecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCC--eEEEEEecccCCeEEEEECCCCCEEEEEcCCCeE
Q psy4393 17 YVLKFTL-AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG--KFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTL 93 (247)
Q Consensus 17 ~~~~~~~-~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 93 (247)
+..+..+ .+|++.|.+++|+|.|++|++|+-|.++.||...++ ++...+.+|...|.+++|+++|++||+++.|..|
T Consensus 50 ~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSV 129 (312)
T KOG0645|consen 50 WTCKTVLDDGHKRSVRSVAWSPHGRYLASASFDATVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSV 129 (312)
T ss_pred EEEEEeccccchheeeeeeecCCCcEEEEeeccceEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeE
Confidence 3444344 379999999999999999999999999999987655 4567789999999999999999999999999999
Q ss_pred EEEECCCc---eEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECC---CCeEEEeecCCCCCeEEEEECCCCCE
Q psy4393 94 KIWELSSG---KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR---TGKCLKTLPAHSDPVSAVHFNRDGSL 167 (247)
Q Consensus 94 ~v~d~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~---~~~~~~~~~~~~~~i~~~~~~~~~~~ 167 (247)
.+|.+..+ .+...++.|...|..+.|+|...+|++++-|.+|++|+-. ...+...+..|...+.+++|+|.|..
T Consensus 130 WiWe~deddEfec~aVL~~HtqDVK~V~WHPt~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~r 209 (312)
T KOG0645|consen 130 WIWEIDEDDEFECIAVLQEHTQDVKHVIWHPTEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGSR 209 (312)
T ss_pred EEEEecCCCcEEEEeeeccccccccEEEEcCCcceeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCCCce
Confidence 99998743 4667889999999999999999999999999999999766 33578889999999999999999999
Q ss_pred EEEecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECC
Q psy4393 168 IVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSK 226 (247)
Q Consensus 168 l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~ 226 (247)
|++++.|+.++||...+ .+...+..++..++|. ...|++++.|+.|++|.-.
T Consensus 210 l~s~sdD~tv~Iw~~~~-----~~~~~~sr~~Y~v~W~--~~~IaS~ggD~~i~lf~~s 261 (312)
T KOG0645|consen 210 LVSCSDDGTVSIWRLYT-----DLSGMHSRALYDVPWD--NGVIASGGGDDAIRLFKES 261 (312)
T ss_pred EEEecCCcceEeeeecc-----CcchhcccceEeeeec--ccceEeccCCCEEEEEEec
Confidence 99999999999997552 2333455678889998 4589999999999999754
No 46
>KOG0275|consensus
Probab=99.97 E-value=5.7e-30 Score=190.81 Aligned_cols=206 Identities=32% Similarity=0.620 Sum_probs=177.3
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEE--------ecccCCeEEEEECCCCCEEEEEcCCCeEEEE
Q psy4393 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI--------SGHKLGISDVAWSSDSRLLVSGSDDKTLKIW 96 (247)
Q Consensus 25 ~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~--------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~ 96 (247)
+..+-+-|..|+|||++|++|+.||.|.+|+..+++....+ --++.+|.++.|+.|...+++|+.||.|++|
T Consensus 211 g~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvW 290 (508)
T KOG0275|consen 211 GQKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVW 290 (508)
T ss_pred ccccchhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEE
Confidence 44566789999999999999999999999999888755433 2356789999999999999999999999999
Q ss_pred ECCCceEEEEEe-cCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCCC
Q psy4393 97 ELSSGKCLKTLK-GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 175 (247)
Q Consensus 97 d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg 175 (247)
.+.+|.+++.+. +|...|.|+.|+.++..+++++.|..+++.-+.+|++++.+++|...|+.+.|.++|.++++++.||
T Consensus 291 ri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~dG~~iisaSsDg 370 (508)
T KOG0275|consen 291 RIETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTDDGHHIISASSDG 370 (508)
T ss_pred EEecchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccchhHHHhcCccccccceEEcCCCCeEEEecCCc
Confidence 999999998886 8888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEeCCCceeeeeecc----------------------------------------------CCCCCeEEEEECCCCC
Q psy4393 176 LCRIWDTASGQCLKTLID----------------------------------------------DDNPPVSFVKFSPNGK 209 (247)
Q Consensus 176 ~i~v~d~~~~~~~~~~~~----------------------------------------------~~~~~v~~~~~s~~~~ 209 (247)
++++|+..+.+++.++.. .+.+...+...+|.|.
T Consensus 371 tvkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~qGQvVrsfsSGkREgGdFi~~~lSpkGe 450 (508)
T KOG0275|consen 371 TVKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQGQVVRSFSSGKREGGDFINAILSPKGE 450 (508)
T ss_pred cEEEecCcchhhhhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEeccceEEeeeccCCccCCceEEEEecCCCc
Confidence 999999987654433210 0112234567889999
Q ss_pred EEEEEEcCCeEEEEECCCcce
Q psy4393 210 YILAATLDNTLKLWDSKVVTP 230 (247)
Q Consensus 210 ~l~~~~~dg~i~vwd~~~~~~ 230 (247)
++++.+.|+.++-|....++.
T Consensus 451 wiYcigED~vlYCF~~~sG~L 471 (508)
T KOG0275|consen 451 WIYCIGEDGVLYCFSVLSGKL 471 (508)
T ss_pred EEEEEccCcEEEEEEeecCce
Confidence 999999999999888766543
No 47
>KOG0643|consensus
Probab=99.97 E-value=5.1e-28 Score=175.63 Aligned_cols=203 Identities=24% Similarity=0.380 Sum_probs=174.8
Q ss_pred EEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcC-----CCeEEE
Q psy4393 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSD-----DKTLKI 95 (247)
Q Consensus 21 ~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----d~~i~v 95 (247)
-++.||++.|.|+..+-+.+++++|+.|.++++||+++++.+..+.. ..+|..+.|+++|++++...+ .+.|.+
T Consensus 46 Gty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~tGk~la~~k~-~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~ 124 (327)
T KOG0643|consen 46 GTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVETGKQLATWKT-NSPVKRVDFSFGGNLILASTDKQMGYTCFVSV 124 (327)
T ss_pred eeecCCCceEEEEEecCCcceeeeccccceeEEEEcCCCcEEEEeec-CCeeEEEeeccCCcEEEEEehhhcCcceEEEE
Confidence 46789999999999999999999999999999999999999888864 567999999999998877654 468999
Q ss_pred EECCC-------ceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCe-EEEeecCCCCCeEEEEECCCCCE
Q psy4393 96 WELSS-------GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK-CLKTLPAHSDPVSAVHFNRDGSL 167 (247)
Q Consensus 96 ~d~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~-~~~~~~~~~~~i~~~~~~~~~~~ 167 (247)
+|++. .++...+..+.+.+..+.|.|-+..|++|.++|.|..||++++. .+.....|...|+.|+++||..+
T Consensus 125 fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~ 204 (327)
T KOG0643|consen 125 FDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLGETIIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRDRTY 204 (327)
T ss_pred EEccCChhhhcccCceEEecCCccceeeeeecccCCEEEEecCCCcEEEEEcccCceeeechhhhccccccccccCCcce
Confidence 99873 34566677777889999999999999999999999999999985 45566788899999999999999
Q ss_pred EEEecCCCeEEEEeCCCceeeeee------------------------------------------------------cc
Q psy4393 168 IVSSSYDGLCRIWDTASGQCLKTL------------------------------------------------------ID 193 (247)
Q Consensus 168 l~~~~~dg~i~v~d~~~~~~~~~~------------------------------------------------------~~ 193 (247)
+++++.|.+-++||.++.+.++++ ..
T Consensus 205 FiT~s~Dttakl~D~~tl~v~Kty~te~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigrvk 284 (327)
T KOG0643|consen 205 FITGSKDTTAKLVDVRTLEVLKTYTTERPVNTAAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGRVK 284 (327)
T ss_pred EEecccCccceeeeccceeeEEEeeecccccceecccccceEEecCCceeeeeeeecccccchhhhHHHHHHHHHhcccc
Confidence 999999999999999876544432 12
Q ss_pred CCCCCeEEEEECCCCCEEEEEEcCCeEEEEE
Q psy4393 194 DDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224 (247)
Q Consensus 194 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd 224 (247)
.|-+||+.++|+|+|+..++|++||.|++.-
T Consensus 285 GHFGPINsvAfhPdGksYsSGGEDG~VR~h~ 315 (327)
T KOG0643|consen 285 GHFGPINSVAFHPDGKSYSSGGEDGYVRLHH 315 (327)
T ss_pred ccccCcceeEECCCCcccccCCCCceEEEEE
Confidence 3456799999999999999999999999873
No 48
>KOG0278|consensus
Probab=99.97 E-value=4e-29 Score=179.93 Aligned_cols=204 Identities=24% Similarity=0.444 Sum_probs=179.4
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCe-EEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceE
Q psy4393 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-FEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKC 103 (247)
Q Consensus 25 ~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~ 103 (247)
.|..-|.+++|+.|.++|++|+.+..++|||....+ ....+.+|..+|..+.|+...+.|++.+.|+.|++||.+++..
T Consensus 98 ~hkhivk~~af~~ds~~lltgg~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~iLSSadd~tVRLWD~rTgt~ 177 (334)
T KOG0278|consen 98 EHKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKCILSSADDKTVRLWDHRTGTE 177 (334)
T ss_pred hhhheeeeEEecccchhhhccchHHHhhhhhccCCCCCchhhcCCCCcceeEEEeccCceEEeeccCCceEEEEeccCcE
Confidence 577889999999999999999999999999987544 3456889999999999999889999999999999999999999
Q ss_pred EEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCCCeEEEEeCC
Q psy4393 104 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA 183 (247)
Q Consensus 104 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~ 183 (247)
++.+.. ...|.++.++++|.++.++. .+.|.+||..+...++..+. +..|.+...+|+...+++|+.|..++.||..
T Consensus 178 v~sL~~-~s~VtSlEvs~dG~ilTia~-gssV~Fwdaksf~~lKs~k~-P~nV~SASL~P~k~~fVaGged~~~~kfDy~ 254 (334)
T KOG0278|consen 178 VQSLEF-NSPVTSLEVSQDGRILTIAY-GSSVKFWDAKSFGLLKSYKM-PCNVESASLHPKKEFFVAGGEDFKVYKFDYN 254 (334)
T ss_pred EEEEec-CCCCcceeeccCCCEEEEec-CceeEEeccccccceeeccC-ccccccccccCCCceEEecCcceEEEEEecc
Confidence 988874 45688999999998777654 56899999999888888765 3468888999999999999999999999999
Q ss_pred CceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcceE
Q psy4393 184 SGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPA 231 (247)
Q Consensus 184 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~ 231 (247)
+++.+..+...+.++|.++.|+|||...++|++||+|++|....+++.
T Consensus 255 TgeEi~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQt~~~~~~ 302 (334)
T KOG0278|consen 255 TGEEIGSYNKGHFGPVHCVRFSPDGELYASGSEDGTIRLWQTTPGKTY 302 (334)
T ss_pred CCceeeecccCCCCceEEEEECCCCceeeccCCCceEEEEEecCCCch
Confidence 998887766677889999999999999999999999999998766543
No 49
>KOG0292|consensus
Probab=99.97 E-value=1.7e-28 Score=203.08 Aligned_cols=211 Identities=30% Similarity=0.523 Sum_probs=186.6
Q ss_pred ecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceE
Q psy4393 24 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKC 103 (247)
Q Consensus 24 ~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~ 103 (247)
.+|.++|..+.|+|++.++++|+.|-.|++|+..+.++..++.+|..-|..+.|++.--+|+++++|.+|++|+..+.++
T Consensus 48 deHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~rrclftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~ 127 (1202)
T KOG0292|consen 48 DEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTRRCLFTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRKC 127 (1202)
T ss_pred hccCCccceeeecCCCCeEEecCCccEEEEEecccceehhhhccccceeEEeeccCCCceEEEccCCCeEEEEeccCCce
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCe-----------------------------EEEeecCCCC
Q psy4393 104 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK-----------------------------CLKTLPAHSD 154 (247)
Q Consensus 104 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~-----------------------------~~~~~~~~~~ 154 (247)
+..+++|...|.|..|+|...++++++-|.+|++||+..-+ ....+.+|..
T Consensus 128 iavltGHnHYVMcAqFhptEDlIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDR 207 (1202)
T KOG0292|consen 128 IAVLTGHNHYVMCAQFHPTEDLIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDR 207 (1202)
T ss_pred EEEEecCceEEEeeccCCccceEEEecccceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeeccccc
Confidence 99999999999999999999999999999999999984210 0133567888
Q ss_pred CeEEEEECCCCCEEEEecCCCeEEEEeCCCcee-eeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcceEEE
Q psy4393 155 PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC-LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAII 233 (247)
Q Consensus 155 ~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~-~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~ 233 (247)
.|+-++|+|.-.++++|+.|..|++|.+...+. ......+|...|+++-|+|...++++.++|+.|+|||+.--+++-.
T Consensus 208 GVNwaAfhpTlpliVSG~DDRqVKlWrmnetKaWEvDtcrgH~nnVssvlfhp~q~lIlSnsEDksirVwDm~kRt~v~t 287 (1202)
T KOG0292|consen 208 GVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTCRGHYNNVSSVLFHPHQDLILSNSEDKSIRVWDMTKRTSVQT 287 (1202)
T ss_pred ccceEEecCCcceEEecCCcceeeEEEeccccceeehhhhcccCCcceEEecCccceeEecCCCccEEEEecccccceee
Confidence 899999999999999999999999998765432 2233445667899999999999999999999999999876665555
Q ss_pred E
Q psy4393 234 C 234 (247)
Q Consensus 234 ~ 234 (247)
+
T Consensus 288 f 288 (1202)
T KOG0292|consen 288 F 288 (1202)
T ss_pred e
Confidence 4
No 50
>KOG0319|consensus
Probab=99.96 E-value=1.5e-28 Score=199.57 Aligned_cols=203 Identities=33% Similarity=0.558 Sum_probs=183.2
Q ss_pred ecCCCCeEEEEECCCCC-EEEEEeCCCeEEEEecCCCeE---EE------EEecccCCeEEEEECCCCCEEEEEcCCCeE
Q psy4393 24 AGHTKAVSSVKFSPNGE-WLASSSADKLIKIWGAYDGKF---EK------TISGHKLGISDVAWSSDSRLLVSGSDDKTL 93 (247)
Q Consensus 24 ~~h~~~v~~~~~s~~~~-~l~~~~~dg~v~iw~~~~~~~---~~------~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 93 (247)
.+|+..|.+++++..+. ++++++.|.++++|++...+. .. ....|+..|++++.+|+.++|+||+.|.+.
T Consensus 408 ~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~SqDkta 487 (775)
T KOG0319|consen 408 NGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDKLIATGSQDKTA 487 (775)
T ss_pred cccccccceeeecccCccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccceEecCCCceEEecccccce
Confidence 47999999999987654 788999999999999865211 11 123588889999999999999999999999
Q ss_pred EEEECCCceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecC
Q psy4393 94 KIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY 173 (247)
Q Consensus 94 ~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 173 (247)
++|++++......+.+|...++++.|+|..+.++|++.|.+|++|.+.+..+++.+.+|...|..+.|-.+++.|++++.
T Consensus 488 KiW~le~~~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~eGH~~aVlra~F~~~~~qliS~~a 567 (775)
T KOG0319|consen 488 KIWDLEQLRLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTFEGHTSAVLRASFIRNGKQLISAGA 567 (775)
T ss_pred eeecccCceEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEeccceeeeeecCccceeEeeeeeeCCcEEEeccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCC
Q psy4393 174 DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKV 227 (247)
Q Consensus 174 dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~ 227 (247)
||.+++|++.++++..++ ..|...|..++.+|...++++|+.||+|.+|.-.+
T Consensus 568 dGliKlWnikt~eC~~tl-D~H~DrvWaL~~~~~~~~~~tgg~Dg~i~~wkD~T 620 (775)
T KOG0319|consen 568 DGLIKLWNIKTNECEMTL-DAHNDRVWALSVSPLLDMFVTGGGDGRIIFWKDVT 620 (775)
T ss_pred CCcEEEEeccchhhhhhh-hhccceeEEEeecCccceeEecCCCeEEEEeecCc
Confidence 999999999999998875 45667899999999999999999999999996433
No 51
>KOG0276|consensus
Probab=99.96 E-value=3.7e-28 Score=194.38 Aligned_cols=203 Identities=29% Similarity=0.546 Sum_probs=186.6
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCc-eEEE
Q psy4393 27 TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSG-KCLK 105 (247)
Q Consensus 27 ~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~-~~~~ 105 (247)
..+|.+.+|-+-.+++++|+.|..|+||+..+++.+..+..|..-|++++.+|..-+++++++|-.|++||.+.+ .+.+
T Consensus 55 ~~PvRa~kfiaRknWiv~GsDD~~IrVfnynt~ekV~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~q 134 (794)
T KOG0276|consen 55 EVPVRAAKFIARKNWIVTGSDDMQIRVFNYNTGEKVKTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQ 134 (794)
T ss_pred ccchhhheeeeccceEEEecCCceEEEEecccceeeEEeeccccceeeeeecCCCCeEEecCCccEEEEeeccCceeeee
Confidence 567889999999999999999999999999999999999999999999999999999999999999999999865 5778
Q ss_pred EEecCCccEEEEEEcC-CCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCC--CEEEEecCCCeEEEEeC
Q psy4393 106 TLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDG--SLIVSSSYDGLCRIWDT 182 (247)
Q Consensus 106 ~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~--~~l~~~~~dg~i~v~d~ 182 (247)
.+.+|...|.+++|+| |.+.+++++-|++|++|.+.+..+..++.+|...|+|+.+-+-| .+|++|+.|..+++||.
T Consensus 135 tfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDy 214 (794)
T KOG0276|consen 135 TFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDY 214 (794)
T ss_pred EEcCcceEEEEEEecCCCccceeeeeccccEEEEEcCCCCCceeeeccccCcceEEeccCCCcceEEecCCCceEEEeec
Confidence 8999999999999999 67899999999999999999999999999999999999998744 69999999999999999
Q ss_pred CCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcce
Q psy4393 183 ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTP 230 (247)
Q Consensus 183 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~ 230 (247)
.+.++++++. +|...|+.+.|+|.=..+++|++||+++||...+-..
T Consensus 215 Qtk~CV~TLe-GHt~Nvs~v~fhp~lpiiisgsEDGTvriWhs~Ty~l 261 (794)
T KOG0276|consen 215 QTKSCVQTLE-GHTNNVSFVFFHPELPIIISGSEDGTVRIWNSKTYKL 261 (794)
T ss_pred chHHHHHHhh-cccccceEEEecCCCcEEEEecCCccEEEecCcceeh
Confidence 9999888764 4566799999999999999999999999999876543
No 52
>KOG1407|consensus
Probab=99.96 E-value=5.4e-28 Score=174.93 Aligned_cols=211 Identities=27% Similarity=0.513 Sum_probs=176.2
Q ss_pred EEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEE--EEecccCCeEEEEECC-CCCEEEEEcCCCeEEEEE
Q psy4393 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK--TISGHKLGISDVAWSS-DSRLLVSGSDDKTLKIWE 97 (247)
Q Consensus 21 ~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~--~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~v~d 97 (247)
..+.+|...|.+++|+.+|..|++|+.|+++.+|+++..+... ...+|...|..++|+| ....+++++.|..|++||
T Consensus 14 r~~~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd 93 (313)
T KOG1407|consen 14 RELQGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWD 93 (313)
T ss_pred HHhhhhhhcceEEEEcccCceeeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEEEE
Confidence 4566899999999999999999999999999999998665443 3467888899999988 456899999999999999
Q ss_pred CCCceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCe---------------------------------
Q psy4393 98 LSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK--------------------------------- 144 (247)
Q Consensus 98 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~--------------------------------- 144 (247)
.+.+++...+....+.+. +.|+|++++++.++.|..|...|.++.+
T Consensus 94 ~r~~k~~~~i~~~~eni~-i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~~~~e~ne~~w~~~nd~Fflt~GlG~v~ 172 (313)
T KOG1407|consen 94 IRSGKCTARIETKGENIN-ITWSPDGEYIAVGNKDDRITFIDARTYKIVNEEQFKFEVNEISWNNSNDLFFLTNGLGCVE 172 (313)
T ss_pred eccCcEEEEeeccCcceE-EEEcCCCCEEEEecCcccEEEEEecccceeehhcccceeeeeeecCCCCEEEEecCCceEE
Confidence 999998887776555554 6799999999999999999998886522
Q ss_pred --------EEEeecCCCCCeEEEEECCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEc
Q psy4393 145 --------CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATL 216 (247)
Q Consensus 145 --------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~ 216 (247)
++..+++|...+.|+.|+|+|++||+|+.|..+.+||+...-+.+.+ .....||..++|+.||++||++++
T Consensus 173 ILsypsLkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~i-sRldwpVRTlSFS~dg~~lASaSE 251 (313)
T KOG1407|consen 173 ILSYPSLKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELICERCI-SRLDWPVRTLSFSHDGRMLASASE 251 (313)
T ss_pred EEeccccccccccccCCcceEEEEECCCCceEeeccccceeeccChhHhhhheee-ccccCceEEEEeccCcceeeccCc
Confidence 23445678888889999999999999999999999999876665554 345689999999999999999999
Q ss_pred CCeEEEEECCCcceEEE
Q psy4393 217 DNTLKLWDSKVVTPAII 233 (247)
Q Consensus 217 dg~i~vwd~~~~~~~~~ 233 (247)
|..|-|=+..++..+-.
T Consensus 252 Dh~IDIA~vetGd~~~e 268 (313)
T KOG1407|consen 252 DHFIDIAEVETGDRVWE 268 (313)
T ss_pred cceEEeEecccCCeEEE
Confidence 99998887777654433
No 53
>KOG0277|consensus
Probab=99.96 E-value=2.7e-28 Score=175.89 Aligned_cols=203 Identities=24% Similarity=0.471 Sum_probs=171.7
Q ss_pred cCCCCeEEEEECCCC-CEEEEEeCCCeEEEEecCC-CeEEEEEecccCCeEEEEECC-CCCEEEEEcCCCeEEEEECCCc
Q psy4393 25 GHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYD-GKFEKTISGHKLGISDVAWSS-DSRLLVSGSDDKTLKIWELSSG 101 (247)
Q Consensus 25 ~h~~~v~~~~~s~~~-~~l~~~~~dg~v~iw~~~~-~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~v~d~~~~ 101 (247)
.-...+..++|+++. +.+++++.||.+++||... ......++.|...|.++.|++ .++.+++++.|++|++|+...+
T Consensus 58 d~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~ 137 (311)
T KOG0277|consen 58 DTEDGLFDVAWSENHENQVIAASGDGSLRLFDLTMPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRP 137 (311)
T ss_pred ecccceeEeeecCCCcceEEEEecCceEEEeccCCCCcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCC
Confidence 346778899999965 4677889999999999532 345566788999999999998 4566788899999999999999
Q ss_pred eEEEEEecCCccEEEEEEcC-CCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECC-CCCEEEEecCCCeEEE
Q psy4393 102 KCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRI 179 (247)
Q Consensus 102 ~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~v 179 (247)
+.+.++++|...|....|+| ..+++++++.|+.+++||++.......+.+|...+.++.|++ +...+++|+.|+.|+.
T Consensus 138 ~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~ 217 (311)
T KOG0277|consen 138 NSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMSIEAHNSEILCCDWSKYNHNVLATGGVDNLVRG 217 (311)
T ss_pred cceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeEEEeccceeEeecccccCCcEEEecCCCceEEE
Confidence 99999999999999999999 568999999999999999987655555889998999999997 5568899999999999
Q ss_pred EeCCCceeeeeeccCCCCCeEEEEECCCC-CEEEEEEcCCeEEEEECCC
Q psy4393 180 WDTASGQCLKTLIDDDNPPVSFVKFSPNG-KYILAATLDNTLKLWDSKV 227 (247)
Q Consensus 180 ~d~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~vwd~~~ 227 (247)
||+++.+.....+..+...|..++|||.. ..|++++.|-+++|||...
T Consensus 218 wDir~~r~pl~eL~gh~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~~ 266 (311)
T KOG0277|consen 218 WDIRNLRTPLFELNGHGLAVRKVKFSPHHASLLASASYDMTVRIWDPER 266 (311)
T ss_pred EehhhccccceeecCCceEEEEEecCcchhhHhhhccccceEEeccccc
Confidence 99998654433346777889999999975 5788999999999999763
No 54
>KOG0265|consensus
Probab=99.96 E-value=8.9e-28 Score=176.83 Aligned_cols=207 Identities=29% Similarity=0.548 Sum_probs=177.1
Q ss_pred EEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCC-CEEEEEcCCCeEEEEECCC
Q psy4393 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS-RLLVSGSDDKTLKIWELSS 100 (247)
Q Consensus 22 ~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~v~d~~~ 100 (247)
.+++|.++|..+.|.+|++.|++++.|.+++.||+++++.....++|..-|+.+.-+.-| .++.+++.|+++++||+++
T Consensus 85 ~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~ 164 (338)
T KOG0265|consen 85 VLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWDAETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRK 164 (338)
T ss_pred eeccccceeEeeeeccCCCEEEEecCCceEEEEecccceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecc
Confidence 445899999999999999999999999999999999999999999998888887733333 4577889999999999998
Q ss_pred ceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCCCeEEEE
Q psy4393 101 GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 180 (247)
Q Consensus 101 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~ 180 (247)
...++.+. ....+.++.|..++..+.+|+-|+.|++||++.+.....+.+|..+|+.+..+|+|.++.+-+.|.++++|
T Consensus 165 k~~~~t~~-~kyqltAv~f~d~s~qv~sggIdn~ikvWd~r~~d~~~~lsGh~DtIt~lsls~~gs~llsnsMd~tvrvw 243 (338)
T KOG0265|consen 165 KEAIKTFE-NKYQLTAVGFKDTSDQVISGGIDNDIKVWDLRKNDGLYTLSGHADTITGLSLSRYGSFLLSNSMDNTVRVW 243 (338)
T ss_pred cchhhccc-cceeEEEEEecccccceeeccccCceeeeccccCcceEEeecccCceeeEEeccCCCccccccccceEEEE
Confidence 88777664 34568899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCce----eeeeeccC-C--CCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcc
Q psy4393 181 DTASGQ----CLKTLIDD-D--NPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVT 229 (247)
Q Consensus 181 d~~~~~----~~~~~~~~-~--~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~ 229 (247)
|++... ++..+..+ + ......++|+|+++.+.+|+.|..+.+||.....
T Consensus 244 d~rp~~p~~R~v~if~g~~hnfeknlL~cswsp~~~~i~ags~dr~vyvwd~~~r~ 299 (338)
T KOG0265|consen 244 DVRPFAPSQRCVKIFQGHIHNFEKNLLKCSWSPNGTKITAGSADRFVYVWDTTSRR 299 (338)
T ss_pred EecccCCCCceEEEeecchhhhhhhcceeeccCCCCccccccccceEEEeeccccc
Confidence 998532 23333322 1 1233457899999999999999999999987643
No 55
>PTZ00420 coronin; Provisional
Probab=99.96 E-value=1.4e-26 Score=192.18 Aligned_cols=194 Identities=23% Similarity=0.371 Sum_probs=156.8
Q ss_pred EeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCC-CCEEEEEcCCCeEEEEECCCce--------EEEEEecCCccEE
Q psy4393 45 SSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD-SRLLVSGSDDKTLKIWELSSGK--------CLKTLKGHSNYVF 115 (247)
Q Consensus 45 ~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~v~d~~~~~--------~~~~~~~~~~~v~ 115 (247)
|+.++.+++|+.........+.+|...|.+++|+|+ +++|++|+.|+.|++||+.++. .+..+.+|...|.
T Consensus 50 GG~~gvI~L~~~~r~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~ 129 (568)
T PTZ00420 50 GGLIGAIRLENQMRKPPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKIS 129 (568)
T ss_pred CCceeEEEeeecCCCceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEE
Confidence 556788999998776677788899999999999996 7899999999999999997542 2345778889999
Q ss_pred EEEEcCCCCE-EEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCCCeEEEEeCCCceeeeeeccC
Q psy4393 116 CCNFNPQSNL-IVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD 194 (247)
Q Consensus 116 ~~~~~~~~~~-l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~ 194 (247)
+++|+|++.. +++++.|+.|++||+++++....+. +...|.+++|+|+|.+|++++.|+.+++||+++++.+..+..+
T Consensus 130 sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~-~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i~tl~gH 208 (568)
T PTZ00420 130 IIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQIN-MPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIASSFHIH 208 (568)
T ss_pred EEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEe-cCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEEEEEecc
Confidence 9999998875 5788999999999999988776665 4578999999999999999999999999999999877665443
Q ss_pred CCC----CeEEEEECCCCCEEEEEEcCC----eEEEEECCC-cceEEEEccCCc
Q psy4393 195 DNP----PVSFVKFSPNGKYILAATLDN----TLKLWDSKV-VTPAIICSTPLN 239 (247)
Q Consensus 195 ~~~----~v~~~~~s~~~~~l~~~~~dg----~i~vwd~~~-~~~~~~~~~~~~ 239 (247)
... .+....|++++.+|++++.|+ .|+|||.+. ..|+........
T Consensus 209 ~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~ 262 (568)
T PTZ00420 209 DGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNA 262 (568)
T ss_pred cCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCC
Confidence 322 122334678999999988774 799999995 566655544333
No 56
>KOG0285|consensus
Probab=99.96 E-value=1.2e-27 Score=180.09 Aligned_cols=210 Identities=29% Similarity=0.522 Sum_probs=180.2
Q ss_pred ceEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEE
Q psy4393 17 YVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIW 96 (247)
Q Consensus 17 ~~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~ 96 (247)
..++.++.||...|..+++|+--.+|++++.|+.|+-||++..+..+.+.+|-.+|.+++.+|.-..|++++.|..+++|
T Consensus 183 g~LkltltGhi~~vr~vavS~rHpYlFs~gedk~VKCwDLe~nkvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvW 262 (460)
T KOG0285|consen 183 GQLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCWDLEYNKVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVW 262 (460)
T ss_pred CeEEEeecchhheeeeeeecccCceEEEecCCCeeEEEechhhhhHHHhccccceeEEEeccccceeEEecCCcceEEEe
Confidence 56788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ECCCceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEE----------------
Q psy4393 97 ELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVH---------------- 160 (247)
Q Consensus 97 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~---------------- 160 (247)
|+++...+..+.+|...|..+.+.|....+++|+-|++|++||++.++....+..|...+.+++
T Consensus 263 DiRtr~~V~~l~GH~~~V~~V~~~~~dpqvit~S~D~tvrlWDl~agkt~~tlt~hkksvral~lhP~e~~fASas~dni 342 (460)
T KOG0285|consen 263 DIRTRASVHVLSGHTNPVASVMCQPTDPQVITGSHDSTVRLWDLRAGKTMITLTHHKKSVRALCLHPKENLFASASPDNI 342 (460)
T ss_pred eecccceEEEecCCCCcceeEEeecCCCceEEecCCceEEEeeeccCceeEeeecccceeeEEecCCchhhhhccCCccc
Confidence 9999999999999999999999999888999999999999999998876655555544444444
Q ss_pred -------------------------ECCCCCEEEEecCCCeEEEEeCCCceeeeee---cc----CCCCCeEEEEECCCC
Q psy4393 161 -------------------------FNRDGSLIVSSSYDGLCRIWDTASGQCLKTL---ID----DDNPPVSFVKFSPNG 208 (247)
Q Consensus 161 -------------------------~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~---~~----~~~~~v~~~~~s~~~ 208 (247)
.+.|+ ++++|+.+|.+.+||-+++...+.. .. ..+..|.+.+|+..|
T Consensus 343 k~w~~p~g~f~~nlsgh~~iintl~~nsD~-v~~~G~dng~~~fwdwksg~nyQ~~~t~vqpGSl~sEagI~as~fDktg 421 (460)
T KOG0285|consen 343 KQWKLPEGEFLQNLSGHNAIINTLSVNSDG-VLVSGGDNGSIMFWDWKSGHNYQRGQTIVQPGSLESEAGIFASCFDKTG 421 (460)
T ss_pred eeccCCccchhhccccccceeeeeeeccCc-eEEEcCCceEEEEEecCcCcccccccccccCCccccccceeEEeecccC
Confidence 33333 5678888899999999887554433 11 124567888999999
Q ss_pred CEEEEEEcCCeEEEEECCC
Q psy4393 209 KYILAATLDNTLKLWDSKV 227 (247)
Q Consensus 209 ~~l~~~~~dg~i~vwd~~~ 227 (247)
..|++|..|.+|++|.-+.
T Consensus 422 ~rlit~eadKtIk~~keDe 440 (460)
T KOG0285|consen 422 SRLITGEADKTIKMYKEDE 440 (460)
T ss_pred ceEEeccCCcceEEEeccc
Confidence 9999999999999997543
No 57
>KOG0281|consensus
Probab=99.96 E-value=1.8e-29 Score=189.56 Aligned_cols=198 Identities=27% Similarity=0.548 Sum_probs=173.3
Q ss_pred EEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCC
Q psy4393 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSS 100 (247)
Q Consensus 21 ~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~ 100 (247)
+.+.||++.|.|+.|. .+.+++|+.|.+|++||..+++....+..|...|..+.|+. .++++++.|..+.+||+..
T Consensus 231 ~~L~GHtGSVLCLqyd--~rviisGSSDsTvrvWDv~tge~l~tlihHceaVLhlrf~n--g~mvtcSkDrsiaVWdm~s 306 (499)
T KOG0281|consen 231 KILTGHTGSVLCLQYD--ERVIVSGSSDSTVRVWDVNTGEPLNTLIHHCEAVLHLRFSN--GYMVTCSKDRSIAVWDMAS 306 (499)
T ss_pred HhhhcCCCcEEeeecc--ceEEEecCCCceEEEEeccCCchhhHHhhhcceeEEEEEeC--CEEEEecCCceeEEEeccC
Confidence 4567999999999985 56889999999999999999999999999999999999974 6899999999999999976
Q ss_pred ce---EEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCCCeE
Q psy4393 101 GK---CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 177 (247)
Q Consensus 101 ~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i 177 (247)
.. +.+.+.+|...|..+.|+. +++++++.|++|++|++.+.+.+..+.+|...|.|+.+ .++++++|+.|.+|
T Consensus 307 ps~it~rrVLvGHrAaVNvVdfd~--kyIVsASgDRTikvW~~st~efvRtl~gHkRGIAClQY--r~rlvVSGSSDntI 382 (499)
T KOG0281|consen 307 PTDITLRRVLVGHRAAVNVVDFDD--KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTI 382 (499)
T ss_pred chHHHHHHHHhhhhhheeeecccc--ceEEEecCCceEEEEeccceeeehhhhcccccceehhc--cCeEEEecCCCceE
Confidence 43 2345678888899888874 59999999999999999999999999999999998877 67899999999999
Q ss_pred EEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcc
Q psy4393 178 RIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVT 229 (247)
Q Consensus 178 ~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~ 229 (247)
++||+..|.+++.+. +++.-|.++.|+ .+.+++|+.||+|+|||.+.+.
T Consensus 383 Rlwdi~~G~cLRvLe-GHEeLvRciRFd--~krIVSGaYDGkikvWdl~aal 431 (499)
T KOG0281|consen 383 RLWDIECGACLRVLE-GHEELVRCIRFD--NKRIVSGAYDGKIKVWDLQAAL 431 (499)
T ss_pred EEEeccccHHHHHHh-chHHhhhheeec--CceeeeccccceEEEEeccccc
Confidence 999999999887654 455678889886 4679999999999999998764
No 58
>KOG0306|consensus
Probab=99.96 E-value=6.9e-28 Score=196.26 Aligned_cols=223 Identities=28% Similarity=0.444 Sum_probs=190.7
Q ss_pred EEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCC-----CeEEEEE-------ecccCCeEEEEECCCCCEEEEEc
Q psy4393 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-----GKFEKTI-------SGHKLGISDVAWSSDSRLLVSGS 88 (247)
Q Consensus 21 ~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~-----~~~~~~~-------~~~~~~v~~~~~~~~~~~l~~~~ 88 (247)
.++.+|.+.|-+++.+||++.+++|+.|.+|++||..- +.....+ -.-...|.++.++|||++++++-
T Consensus 448 Eti~AHdgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Spdgk~LaVsL 527 (888)
T KOG0306|consen 448 ETIRAHDGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSPDGKLLAVSL 527 (888)
T ss_pred hhhhccccceeeeeecCCCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEcCCCcEEEEEe
Confidence 34568999999999999999999999999999998631 1111111 11245689999999999999999
Q ss_pred CCCeEEEEECCCceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEE
Q psy4393 89 DDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLI 168 (247)
Q Consensus 89 ~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 168 (247)
-|.++++|-+.+-+....+.+|.-+|.|+..+|++++++||+.|..|++|-+.-|.+-+.+.+|...|.++.|-|....+
T Consensus 528 LdnTVkVyflDtlKFflsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDCHKS~fAHdDSvm~V~F~P~~~~F 607 (888)
T KOG0306|consen 528 LDNTVKVYFLDTLKFFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCHKSFFAHDDSVMSVQFLPKTHLF 607 (888)
T ss_pred ccCeEEEEEecceeeeeeecccccceeEEeccCCcCeEEeccCCCceEEeccccchhhhhhhcccCceeEEEEcccceeE
Confidence 99999999999999888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcceEEEEccCCccccee
Q psy4393 169 VSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTPLNLNYFY 244 (247)
Q Consensus 169 ~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~ 244 (247)
.+++.|+.++-||...-+.++.+. .|...|.+++.+|+|.++++++.|..|++|+......++..+..-+.++.|
T Consensus 608 Ft~gKD~kvKqWDg~kFe~iq~L~-~H~~ev~cLav~~~G~~vvs~shD~sIRlwE~tde~~~lEeekE~ErEe~y 682 (888)
T KOG0306|consen 608 FTCGKDGKVKQWDGEKFEEIQKLD-GHHSEVWCLAVSPNGSFVVSSSHDKSIRLWERTDEILILEEEKEGEREEEY 682 (888)
T ss_pred EEecCcceEEeechhhhhhheeec-cchheeeeeEEcCCCCeEEeccCCceeEeeeccCcceeeehhhhhhhHHHH
Confidence 999999999999998877776654 455789999999999999999999999999976655555544444444443
No 59
>KOG0294|consensus
Probab=99.96 E-value=5.7e-27 Score=173.72 Aligned_cols=212 Identities=25% Similarity=0.394 Sum_probs=172.2
Q ss_pred CCCCceEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCC--EEEEEcCC
Q psy4393 13 PKPNYVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR--LLVSGSDD 90 (247)
Q Consensus 13 ~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~d 90 (247)
.++.+..-|.+..|.++|++++.+ +.++|+|+.|.+|+|||+........+..|.+.|+++.|.+.-. .|++|+.|
T Consensus 29 ~~~~l~~lF~~~aH~~sitavAVs--~~~~aSGssDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S~shLlS~sdD 106 (362)
T KOG0294|consen 29 VKPTLKPLFAFSAHAGSITALAVS--GPYVASGSSDETIHIYDMRKRKQLGILLSHAGSITALKFYPPLSKSHLLSGSDD 106 (362)
T ss_pred cceeeeccccccccccceeEEEec--ceeEeccCCCCcEEEEeccchhhhcceeccccceEEEEecCCcchhheeeecCC
Confidence 345566778888999999999985 89999999999999999988888888888999999999998764 89999999
Q ss_pred CeEEEEECCCceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCC------------------
Q psy4393 91 KTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAH------------------ 152 (247)
Q Consensus 91 ~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~------------------ 152 (247)
|.|.+|+...-..+..+++|...|..++.+|.+++.++.+.|+.++.||+-.|+.-......
T Consensus 107 G~i~iw~~~~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~v~~L~~~at~v~w~~~Gd~F~v~ 186 (362)
T KOG0294|consen 107 GHIIIWRVGSWELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAFVLNLKNKATLVSWSPQGDHFVVS 186 (362)
T ss_pred CcEEEEEcCCeEEeeeecccccccceeEecCCCceEEEEcCCceeeeehhhcCccceeeccCCcceeeEEcCCCCEEEEE
Confidence 99999999999999999999999999999999999999999999999999766532221110
Q ss_pred ---------------------CCCeEEEEECCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEE--CCCCC
Q psy4393 153 ---------------------SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKF--SPNGK 209 (247)
Q Consensus 153 ---------------------~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~--s~~~~ 209 (247)
...+.|+.|. ++..|++|+.++.|.+||..+..+...+ ..|...|..+.+ .|++.
T Consensus 187 ~~~~i~i~q~d~A~v~~~i~~~~r~l~~~~l-~~~~L~vG~d~~~i~~~D~ds~~~~~~~-~AH~~RVK~i~~~~~~~~~ 264 (362)
T KOG0294|consen 187 GRNKIDIYQLDNASVFREIENPKRILCATFL-DGSELLVGGDNEWISLKDTDSDTPLTEF-LAHENRVKDIASYTNPEHE 264 (362)
T ss_pred eccEEEEEecccHhHhhhhhccccceeeeec-CCceEEEecCCceEEEeccCCCccceee-ecchhheeeeEEEecCCce
Confidence 0113333332 4556788888899999998876655444 345556766653 57889
Q ss_pred EEEEEEcCCeEEEEECCCc
Q psy4393 210 YILAATLDNTLKLWDSKVV 228 (247)
Q Consensus 210 ~l~~~~~dg~i~vwd~~~~ 228 (247)
+|++++.||.|+|||.++.
T Consensus 265 ~lvTaSSDG~I~vWd~~~~ 283 (362)
T KOG0294|consen 265 YLVTASSDGFIKVWDIDME 283 (362)
T ss_pred EEEEeccCceEEEEEcccc
Confidence 9999999999999999876
No 60
>KOG0319|consensus
Probab=99.96 E-value=3.8e-28 Score=197.27 Aligned_cols=215 Identities=31% Similarity=0.504 Sum_probs=185.8
Q ss_pred EEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCe----EEEEEecccCCeEEEEECCCC-CEEEEEcCCCeEEEE
Q psy4393 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK----FEKTISGHKLGISDVAWSSDS-RLLVSGSDDKTLKIW 96 (247)
Q Consensus 22 ~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~----~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~v~ 96 (247)
-+.||...|.++.-..+|-+|++|++|.++++|.+.++. +.....+|...|.+++++..+ .++++++.|+++++|
T Consensus 360 ii~GH~e~vlSL~~~~~g~llat~sKD~svilWr~~~~~~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W 439 (775)
T KOG0319|consen 360 IIPGHTEAVLSLDVWSSGDLLATGSKDKSVILWRLNNNCSKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLW 439 (775)
T ss_pred EEeCchhheeeeeecccCcEEEEecCCceEEEEEecCCcchhhhhhhhcccccccceeeecccCccEEEEecCCceEEEe
Confidence 567999999999966778899999999999999874433 234457899999999997643 578999999999999
Q ss_pred ECCCceE-----EE----EEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCE
Q psy4393 97 ELSSGKC-----LK----TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSL 167 (247)
Q Consensus 97 d~~~~~~-----~~----~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 167 (247)
++...+. .. ....|...|++++++|+..+++||+.|+..++|++...+....+.+|...+.++.|+|..+.
T Consensus 440 ~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~~~l~~vLsGH~RGvw~V~Fs~~dq~ 519 (775)
T KOG0319|consen 440 DLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQLRLLGVLSGHTRGVWCVSFSKNDQL 519 (775)
T ss_pred cCCCcccccccceehhhHHHHhhcccccceEecCCCceEEecccccceeeecccCceEEEEeeCCccceEEEEeccccce
Confidence 9876321 11 22468889999999999999999999999999999998999999999999999999999999
Q ss_pred EEEecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcceEEEEccC
Q psy4393 168 IVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTP 237 (247)
Q Consensus 168 l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~ 237 (247)
+++++.|++|++|.+.+..+++++. +|...|..+.|-.+|+.|++++.||-+++|+.++..+..++-.|
T Consensus 520 laT~SgD~TvKIW~is~fSClkT~e-GH~~aVlra~F~~~~~qliS~~adGliKlWnikt~eC~~tlD~H 588 (775)
T KOG0319|consen 520 LATCSGDKTVKIWSISTFSCLKTFE-GHTSAVLRASFIRNGKQLISAGADGLIKLWNIKTNECEMTLDAH 588 (775)
T ss_pred eEeccCCceEEEEEeccceeeeeec-CccceeEeeeeeeCCcEEEeccCCCcEEEEeccchhhhhhhhhc
Confidence 9999999999999999999999875 45567888899999999999999999999999998877665444
No 61
>KOG0276|consensus
Probab=99.96 E-value=9.5e-28 Score=192.06 Aligned_cols=218 Identities=22% Similarity=0.427 Sum_probs=196.0
Q ss_pred EEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCC
Q psy4393 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSS 100 (247)
Q Consensus 21 ~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~ 100 (247)
.++..|..+|.++.|+|...+++++-.+|.|.||+.++...+..+.....+|++..|-+-.+.+++|++|..|++|+..+
T Consensus 7 rk~~~rSdRVKsVd~HPtePw~la~LynG~V~IWnyetqtmVksfeV~~~PvRa~kfiaRknWiv~GsDD~~IrVfnynt 86 (794)
T KOG0276|consen 7 RKFQSRSDRVKSVDFHPTEPWILAALYNGDVQIWNYETQTMVKSFEVSEVPVRAAKFIARKNWIVTGSDDMQIRVFNYNT 86 (794)
T ss_pred hHhhccCCceeeeecCCCCceEEEeeecCeeEEEecccceeeeeeeecccchhhheeeeccceEEEecCCceEEEEeccc
Confidence 34556889999999999999999999999999999999989999988888999999999889999999999999999999
Q ss_pred ceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCC-eEEEeecCCCCCeEEEEECC-CCCEEEEecCCCeEE
Q psy4393 101 GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG-KCLKTLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCR 178 (247)
Q Consensus 101 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~-~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~ 178 (247)
++.++.+.+|.+.|++++.+|...++++++.|-.|++||-... .+.+.+.+|...|.+++|+| |...+++++.|++|+
T Consensus 87 ~ekV~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVK 166 (794)
T KOG0276|consen 87 GEKVKTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVK 166 (794)
T ss_pred ceeeEEeeccccceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCccceeeeeccccEE
Confidence 9999999999999999999999999999999999999998754 56788999999999999999 456899999999999
Q ss_pred EEeCCCceeeeeeccCCCCCeEEEEECC--CCCEEEEEEcCCeEEEEECCCcceEEEEccCCc
Q psy4393 179 IWDTASGQCLKTLIDDDNPPVSFVKFSP--NGKYILAATLDNTLKLWDSKVVTPAIICSTPLN 239 (247)
Q Consensus 179 v~d~~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~ 239 (247)
+|.+.+..+..++. .|...|+++.+-+ |..+|++|+.|..|+|||.++++++-++.++..
T Consensus 167 VWslgs~~~nfTl~-gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~ 228 (794)
T KOG0276|consen 167 VWSLGSPHPNFTLE-GHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLEGHTN 228 (794)
T ss_pred EEEcCCCCCceeee-ccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhhcccc
Confidence 99999887777765 5667899999876 457999999999999999999887766665544
No 62
>KOG1446|consensus
Probab=99.96 E-value=5e-26 Score=168.74 Aligned_cols=216 Identities=27% Similarity=0.429 Sum_probs=183.7
Q ss_pred ecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcC--CCeEEEEECCCc
Q psy4393 24 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSD--DKTLKIWELSSG 101 (247)
Q Consensus 24 ~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~v~d~~~~ 101 (247)
..-...|.++.|+++|.+|++++.|..+++||..+++....+..+..++..+.|......++.++. |.+|+..++.+.
T Consensus 11 ~~~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryLsl~dN 90 (311)
T KOG1446|consen 11 RETNGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLSLHDN 90 (311)
T ss_pred ccCCCceeEEEecCCCCEEEEecCCCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCceEEEEeecC
Confidence 335778999999999999999999999999999999999999888888888899877666666665 889999999999
Q ss_pred eEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCCCeEEEEe
Q psy4393 102 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181 (247)
Q Consensus 102 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d 181 (247)
+.++.+.+|...|..++.+|-+..+++++.|++|++||+|..++.-.+.....++ .+|+|.|-++|++.....|++||
T Consensus 91 kylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~~pi--~AfDp~GLifA~~~~~~~IkLyD 168 (311)
T KOG1446|consen 91 KYLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLSGRPI--AAFDPEGLIFALANGSELIKLYD 168 (311)
T ss_pred ceEEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEecCCCcc--eeECCCCcEEEEecCCCeEEEEE
Confidence 9999999999999999999999999999999999999999887766655544443 68999999999998888999999
Q ss_pred CCCc--eeeeee--ccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcceEEEEccCCccc
Q psy4393 182 TASG--QCLKTL--IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTPLNLN 241 (247)
Q Consensus 182 ~~~~--~~~~~~--~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~ 241 (247)
++.- .+..++ .......++.+.|||||++++.++..+.+++.|.-++..+-.++.+...+
T Consensus 169 ~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~ 232 (311)
T KOG1446|consen 169 LRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAG 232 (311)
T ss_pred ecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCC
Confidence 9863 222222 22345678999999999999999999999999999988777766665544
No 63
>KOG0274|consensus
Probab=99.96 E-value=8.2e-27 Score=192.79 Aligned_cols=213 Identities=32% Similarity=0.639 Sum_probs=187.2
Q ss_pred ceEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEE
Q psy4393 17 YVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIW 96 (247)
Q Consensus 17 ~~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~ 96 (247)
+.+...+.+|.+.|.+++|...+.+|++|+.|.++++||..++.+...+.+|...+.++...+ ..+++|+.|.+|++|
T Consensus 239 ~~i~~~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~C~~~l~gh~stv~~~~~~~--~~~~sgs~D~tVkVW 316 (537)
T KOG0274|consen 239 YLILTRLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGECTHSLQGHTSSVRCLTIDP--FLLVSGSRDNTVKVW 316 (537)
T ss_pred eEEEeeccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCCCcEEEEecCCCceEEEEEccC--ceEeeccCCceEEEE
Confidence 334444889999999999988788999999999999999999999999999999998887653 567888999999999
Q ss_pred ECCCceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCCCe
Q psy4393 97 ELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGL 176 (247)
Q Consensus 97 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~ 176 (247)
++.++..+..+.+|.++|.++..+ +.++++|+.|+.|++||+.++++++.+.+|...|.++.+.+. ..+++|+.|+.
T Consensus 317 ~v~n~~~l~l~~~h~~~V~~v~~~--~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH~~~V~sl~~~~~-~~~~Sgs~D~~ 393 (537)
T KOG0274|consen 317 DVTNGACLNLLRGHTGPVNCVQLD--EPLLVSGSYDGTVKVWDPRTGKCLKSLSGHTGRVYSLIVDSE-NRLLSGSLDTT 393 (537)
T ss_pred eccCcceEEEeccccccEEEEEec--CCEEEEEecCceEEEEEhhhceeeeeecCCcceEEEEEecCc-ceEEeeeeccc
Confidence 999999999999999999999888 789999999999999999999999999999999999988765 88999999999
Q ss_pred EEEEeCCCc-eeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcceEEEEccC
Q psy4393 177 CRIWDTASG-QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTP 237 (247)
Q Consensus 177 i~v~d~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~ 237 (247)
|++||+++. +++..+.. +...+..+ ...+++|++++.||.|++||..+.+.+.++..+
T Consensus 394 IkvWdl~~~~~c~~tl~~-h~~~v~~l--~~~~~~Lvs~~aD~~Ik~WD~~~~~~~~~~~~~ 452 (537)
T KOG0274|consen 394 IKVWDLRTKRKCIHTLQG-HTSLVSSL--LLRDNFLVSSSADGTIKLWDAEEGECLRTLEGR 452 (537)
T ss_pred eEeecCCchhhhhhhhcC-Cccccccc--ccccceeEeccccccEEEeecccCceeeeeccC
Confidence 999999998 77666543 33344433 455789999999999999999999999888884
No 64
>KOG1446|consensus
Probab=99.96 E-value=1.1e-25 Score=166.88 Aligned_cols=216 Identities=22% Similarity=0.365 Sum_probs=179.9
Q ss_pred EEEEEecCCCCeEEEEECCCCCEEEEEeC--CCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEE
Q psy4393 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSA--DKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIW 96 (247)
Q Consensus 19 ~~~~~~~h~~~v~~~~~s~~~~~l~~~~~--dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~ 96 (247)
...++..++..|..++|......++.++. |.+|+..++.+.+.++-+.+|...|.++..+|-++.+++++.|++|++|
T Consensus 48 ~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryLsl~dNkylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLW 127 (311)
T KOG1446|consen 48 QVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLSLHDNKYLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLW 127 (311)
T ss_pred eeeEeecccccccEEEEecCCceEEEccCCCCCceEEEEeecCceEEEcCCCCceEEEEEecCCCCeEEecccCCeEEee
Confidence 44566667788999999877776666665 8899999999999999999999999999999999999999999999999
Q ss_pred ECCCceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCC--eEEEeec---CCCCCeEEEEECCCCCEEEEe
Q psy4393 97 ELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG--KCLKTLP---AHSDPVSAVHFNRDGSLIVSS 171 (247)
Q Consensus 97 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~--~~~~~~~---~~~~~i~~~~~~~~~~~l~~~ 171 (247)
|++..++...+.....+ .++++|+|-++|++.....|++||+|+- .+...+. ......+.|.|+|||++++.+
T Consensus 128 DlR~~~cqg~l~~~~~p--i~AfDp~GLifA~~~~~~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLls 205 (311)
T KOG1446|consen 128 DLRVKKCQGLLNLSGRP--IAAFDPEGLIFALANGSELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLS 205 (311)
T ss_pred EecCCCCceEEecCCCc--ceeECCCCcEEEEecCCCeEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEE
Confidence 99987776666544433 4689999999999988889999999864 2333333 234568899999999999999
Q ss_pred cCCCeEEEEeCCCceeeeeeccCCC---CCeEEEEECCCCCEEEEEEcCCeEEEEECCCcceEEEEccC
Q psy4393 172 SYDGLCRIWDTASGQCLKTLIDDDN---PPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTP 237 (247)
Q Consensus 172 ~~dg~i~v~d~~~~~~~~~~~~~~~---~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~ 237 (247)
+..+.+.+.|.-+|..+..+..... .+ ....|+||++++++|+.||+|.+|+.+++.++...+.+
T Consensus 206 T~~s~~~~lDAf~G~~~~tfs~~~~~~~~~-~~a~ftPds~Fvl~gs~dg~i~vw~~~tg~~v~~~~~~ 273 (311)
T KOG1446|consen 206 TNASFIYLLDAFDGTVKSTFSGYPNAGNLP-LSATFTPDSKFVLSGSDDGTIHVWNLETGKKVAVLRGP 273 (311)
T ss_pred eCCCcEEEEEccCCcEeeeEeeccCCCCcc-eeEEECCCCcEEEEecCCCcEEEEEcCCCcEeeEecCC
Confidence 9999999999999987777654322 22 35679999999999999999999999999988888875
No 65
>KOG0282|consensus
Probab=99.96 E-value=4.5e-28 Score=188.39 Aligned_cols=204 Identities=25% Similarity=0.458 Sum_probs=172.9
Q ss_pred EEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCC-CEEEEEcCCCeEEEEE
Q psy4393 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS-RLLVSGSDDKTLKIWE 97 (247)
Q Consensus 19 ~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~v~d 97 (247)
...++.+|..+|..++|+++|..+++++.|+.+++||.++|++...+.. ...+.++.|.|++ +.+++|+.|+.|+.||
T Consensus 250 ~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwDtETG~~~~~f~~-~~~~~cvkf~pd~~n~fl~G~sd~ki~~wD 328 (503)
T KOG0282|consen 250 CLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKLWDTETGQVLSRFHL-DKVPTCVKFHPDNQNIFLVGGSDKKIRQWD 328 (503)
T ss_pred eehhhhcchhhhhhhhccccCCeeeeeecceeeeeeccccceEEEEEec-CCCceeeecCCCCCcEEEEecCCCcEEEEe
Confidence 4456679999999999999999999999999999999999999888864 3457899999998 7889999999999999
Q ss_pred CCCceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEe-----------------------------
Q psy4393 98 LSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKT----------------------------- 148 (247)
Q Consensus 98 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~----------------------------- 148 (247)
+++++.++....|-+.|..+.|-+++..+++.+.|+.+++|+.+.+..++.
T Consensus 329 iRs~kvvqeYd~hLg~i~~i~F~~~g~rFissSDdks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~dN~ 408 (503)
T KOG0282|consen 329 IRSGKVVQEYDRHLGAILDITFVDEGRRFISSSDDKSVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGKWFAAQSMDNY 408 (503)
T ss_pred ccchHHHHHHHhhhhheeeeEEccCCceEeeeccCccEEEEEcCCCccchhhcchhhccCcceecCCCCCeehhhccCce
Confidence 999998888888889999999999999999999999999999875432110
Q ss_pred -----------------ecCC--CCCeEEEEECCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCC-
Q psy4393 149 -----------------LPAH--SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG- 208 (247)
Q Consensus 149 -----------------~~~~--~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~- 208 (247)
+..| .+.-..+.|+|||.+|++|..+|.+.+||-.+-+....+. .+..++..+.|+|..
T Consensus 409 i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSpDG~~l~SGdsdG~v~~wdwkt~kl~~~lk-ah~~~ci~v~wHP~e~ 487 (503)
T KOG0282|consen 409 IAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSPDGRTLCSGDSDGKVNFWDWKTTKLVSKLK-AHDQPCIGVDWHPVEP 487 (503)
T ss_pred EEEEecccccccCHhhhhcceeccCceeeEEEcCCCCeEEeecCCccEEEeechhhhhhhccc-cCCcceEEEEecCCCc
Confidence 1112 1234557899999999999999999999999877666554 346788899999975
Q ss_pred CEEEEEEcCCeEEEEE
Q psy4393 209 KYILAATLDNTLKLWD 224 (247)
Q Consensus 209 ~~l~~~~~dg~i~vwd 224 (247)
..+|+++.||.|++||
T Consensus 488 Skvat~~w~G~Ikiwd 503 (503)
T KOG0282|consen 488 SKVATCGWDGLIKIWD 503 (503)
T ss_pred ceeEecccCceeEecC
Confidence 4788999999999996
No 66
>KOG0973|consensus
Probab=99.96 E-value=7.2e-27 Score=196.97 Aligned_cols=211 Identities=32% Similarity=0.487 Sum_probs=179.7
Q ss_pred ceEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCC------------------CeEEEEEecccCCeEEEEEC
Q psy4393 17 YVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD------------------GKFEKTISGHKLGISDVAWS 78 (247)
Q Consensus 17 ~~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~------------------~~~~~~~~~~~~~v~~~~~~ 78 (247)
..+..+...|.+.|.|+.|+|||++||+|+.|+.|.||.... .+....+.+|...|.++.|+
T Consensus 59 ~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Ws 138 (942)
T KOG0973|consen 59 PKHLCTMDDHDGSVNCVRFSPDGSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWS 138 (942)
T ss_pred chhheeeccccCceeEEEECCCCCeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccC
Confidence 345566778999999999999999999999999999998652 12445678899999999999
Q ss_pred CCCCEEEEEcCCCeEEEEECCCceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeE-------------
Q psy4393 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC------------- 145 (247)
Q Consensus 79 ~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~------------- 145 (247)
|++.++++++.|+.|.+||..+.+.++.+++|.+.|-.+.|+|-|++||+-+.|+.|++|++.+...
T Consensus 139 p~~~~lvS~s~DnsViiwn~~tF~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~ 218 (942)
T KOG0973|consen 139 PDDSLLVSVSLDNSVIIWNAKTFELLKVLRGHQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEKSITKPFEESPL 218 (942)
T ss_pred CCccEEEEecccceEEEEccccceeeeeeecccccccceEECCccCeeeeecCCceEEEEEcccceeeEeeccchhhCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999643111
Q ss_pred ---------------------------------------EEeecCCCCCeEEEEECCC-----CC------------EEE
Q psy4393 146 ---------------------------------------LKTLPAHSDPVSAVHFNRD-----GS------------LIV 169 (247)
Q Consensus 146 ---------------------------------------~~~~~~~~~~i~~~~~~~~-----~~------------~l~ 169 (247)
-..+-+|..++.+++|+|. .. .+|
T Consensus 219 ~T~f~RlSWSPDG~~las~nA~n~~~~~~~IieR~tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~A 298 (942)
T KOG0973|consen 219 TTFFLRLSWSPDGHHLASPNAVNGGKSTIAIIERGTWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAA 298 (942)
T ss_pred cceeeecccCCCcCeecchhhccCCcceeEEEecCCceeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEEE
Confidence 1223467889999999872 11 678
Q ss_pred EecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCC
Q psy4393 170 SSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKV 227 (247)
Q Consensus 170 ~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~ 227 (247)
+|+.|+.+.||.....+++.....-....|..++|+|||-.|++++.||+|.+.....
T Consensus 299 vgSqDrSlSVW~T~~~RPl~vi~~lf~~SI~DmsWspdG~~LfacS~DGtV~~i~Fee 356 (942)
T KOG0973|consen 299 VGSQDRSLSVWNTALPRPLFVIHNLFNKSIVDMSWSPDGFSLFACSLDGTVALIHFEE 356 (942)
T ss_pred EecCCccEEEEecCCCCchhhhhhhhcCceeeeeEcCCCCeEEEEecCCeEEEEEcch
Confidence 9999999999998877766555444567899999999999999999999999998654
No 67
>KOG0264|consensus
Probab=99.96 E-value=4.2e-27 Score=181.67 Aligned_cols=225 Identities=28% Similarity=0.462 Sum_probs=177.4
Q ss_pred CCCCCCCCCCCCCCCceEEEEEecCCCCeEEEEECCCCC-EEEEEeCCCeEEEEecCCCe-------EEEEEecccCCeE
Q psy4393 2 NLSNAPSSSSNPKPNYVLKFTLAGHTKAVSSVKFSPNGE-WLASSSADKLIKIWGAYDGK-------FEKTISGHKLGIS 73 (247)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~-~l~~~~~dg~v~iw~~~~~~-------~~~~~~~~~~~v~ 73 (247)
|.++.+..+.... ......++.+|.+.-.+++|++... .|++++.|+.|++||+.... ....+.+|...|.
T Consensus 153 d~tk~~s~~~~~~-~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~Ve 231 (422)
T KOG0264|consen 153 DYTKHPSKPKASG-ECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVE 231 (422)
T ss_pred EeccCCCcccccc-cCCCceEEEeecccccccccccccceeEeeccCCCcEEEEeccccccCCccccceEEeecCCccee
Confidence 4455554433111 3344567779998888999999655 68889999999999985322 2345788999999
Q ss_pred EEEECC-CCCEEEEEcCCCeEEEEECC--CceEEEEEecCCccEEEEEEcC-CCCEEEEeeCCCCEEEEECCCC-eEEEe
Q psy4393 74 DVAWSS-DSRLLVSGSDDKTLKIWELS--SGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVRTG-KCLKT 148 (247)
Q Consensus 74 ~~~~~~-~~~~l~~~~~d~~i~v~d~~--~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~v~d~~~~-~~~~~ 148 (247)
+++|++ +.+.+++++.|+.+.|||++ +.+..+...+|...+.|++|+| ++.+||+|+.|++|++||+|+- +++..
T Consensus 232 DV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~ 311 (422)
T KOG0264|consen 232 DVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHT 311 (422)
T ss_pred hhhccccchhhheeecCCCeEEEEEcCCCCCCCcccccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhcccCcee
Confidence 999998 45678899999999999999 5666777889999999999999 4567899999999999999974 35778
Q ss_pred ecCCCCCeEEEEECCCC-CEEEEecCCCeEEEEeCCCceeee-------------eeccCCCCCeEEEEECCCCCEEE-E
Q psy4393 149 LPAHSDPVSAVHFNRDG-SLIVSSSYDGLCRIWDTASGQCLK-------------TLIDDDNPPVSFVKFSPNGKYIL-A 213 (247)
Q Consensus 149 ~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~v~d~~~~~~~~-------------~~~~~~~~~v~~~~~s~~~~~l~-~ 213 (247)
+..|...|.++.|+|+. ..||+++.|+.+.+||+..-...+ -...+|...|..+.|+|+..+++ +
T Consensus 312 ~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~S 391 (422)
T KOG0264|consen 312 FEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIAS 391 (422)
T ss_pred ccCCCcceEEEEeCCCCCceeEecccCCcEEEEeccccccccChhhhccCCcceeEEecCcccccccccCCCCCCeEEEE
Confidence 88999999999999975 578899999999999987532221 11235667889999999988765 5
Q ss_pred EEcCCeEEEEECCC
Q psy4393 214 ATLDNTLKLWDSKV 227 (247)
Q Consensus 214 ~~~dg~i~vwd~~~ 227 (247)
.+.|+.+.||+...
T Consensus 392 vaeDN~LqIW~~s~ 405 (422)
T KOG0264|consen 392 VAEDNILQIWQMAE 405 (422)
T ss_pred ecCCceEEEeeccc
Confidence 67899999998763
No 68
>KOG0292|consensus
Probab=99.96 E-value=1.7e-27 Score=197.23 Aligned_cols=203 Identities=29% Similarity=0.568 Sum_probs=186.4
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceEE
Q psy4393 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCL 104 (247)
Q Consensus 25 ~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~ 104 (247)
..+.+|.+++|+|...+++++--.|.|++||..-+.+...+..|+++|..+.|+|.+.++++|++|..|++|+.++.+++
T Consensus 7 skSsRvKglsFHP~rPwILtslHsG~IQlWDYRM~tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~rrcl 86 (1202)
T KOG0292|consen 7 SKSSRVKGLSFHPKRPWILTSLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTRRCL 86 (1202)
T ss_pred cccccccceecCCCCCEEEEeecCceeeeehhhhhhHHhhhhccCCccceeeecCCCCeEEecCCccEEEEEecccceeh
Confidence 34678999999999999999999999999999888888899999999999999999999999999999999999999999
Q ss_pred EEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCCCeEEEEeCCC
Q psy4393 105 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 184 (247)
Q Consensus 105 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~ 184 (247)
.++.+|.+.|..+.|++.-..+++++.|.+|++|+.++.+++..+.+|...|.|.+|+|...++++++.|.+|++||+..
T Consensus 87 ftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhptEDlIVSaSLDQTVRVWDisG 166 (1202)
T KOG0292|consen 87 FTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQTVRVWDISG 166 (1202)
T ss_pred hhhccccceeEEeeccCCCceEEEccCCCeEEEEeccCCceEEEEecCceEEEeeccCCccceEEEecccceEEEEeecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999863
Q ss_pred ce----------------------------eeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCC
Q psy4393 185 GQ----------------------------CLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKV 227 (247)
Q Consensus 185 ~~----------------------------~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~ 227 (247)
.+ .++....+|...|+.++|+|.-..+++|+.|..|++|..+.
T Consensus 167 LRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmne 237 (1202)
T KOG0292|consen 167 LRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNE 237 (1202)
T ss_pred hhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCcceeeEEEecc
Confidence 21 12233455667889999999999999999999999998754
No 69
>KOG0647|consensus
Probab=99.96 E-value=1.3e-26 Score=170.98 Aligned_cols=214 Identities=27% Similarity=0.429 Sum_probs=163.3
Q ss_pred CCCCeEEEEECC-CCCEEEEEeCCCeEEEEecCCC-eEE-EEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCce
Q psy4393 26 HTKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDG-KFE-KTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGK 102 (247)
Q Consensus 26 h~~~v~~~~~s~-~~~~l~~~~~dg~v~iw~~~~~-~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~ 102 (247)
-...|.+++||| ...++++++.||+||+|+++.. ... .....|..+|.+++|+.||..+++++.|+.+++||+.+++
T Consensus 26 P~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~Q 105 (347)
T KOG0647|consen 26 PEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASGQ 105 (347)
T ss_pred cccchheeEeccccCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCCceEEEEccCCC
Confidence 357899999999 5556778999999999998763 332 2344578899999999999999999999999999999985
Q ss_pred EEEEEecCCccEEEEEEcCCCC--EEEEeeCCCCEEEEECCCCeEEEeecCC----------------------------
Q psy4393 103 CLKTLKGHSNYVFCCNFNPQSN--LIVSGSFDESVRIWDVRTGKCLKTLPAH---------------------------- 152 (247)
Q Consensus 103 ~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~d~~i~v~d~~~~~~~~~~~~~---------------------------- 152 (247)
+..+..|..+|..+.|-+... .|+||+.|.+|+.||+|...++..+...
T Consensus 106 -~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~LPeRvYa~Dv~~pm~vVata~r~i~vynL~ 184 (347)
T KOG0647|consen 106 -VSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQLPERVYAADVLYPMAVVATAERHIAVYNLE 184 (347)
T ss_pred -eeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeeeccceeeehhccCceeEEEecCCcEEEEEcC
Confidence 456788999999999977555 8999999999999999976554333211
Q ss_pred ---------C----CCeEEEEECCCCCEEEEecCCCeEEEEeCCCceeee--eecc--------CCCCCeEEEEECCCCC
Q psy4393 153 ---------S----DPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLK--TLID--------DDNPPVSFVKFSPNGK 209 (247)
Q Consensus 153 ---------~----~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~--~~~~--------~~~~~v~~~~~s~~~~ 209 (247)
. -.++|++..++....+.|+-+|.+.+..+..+.... .+.- ..-..|+.++|+|...
T Consensus 185 n~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYaVNsi~FhP~hg 264 (347)
T KOG0647|consen 185 NPPTEFKRIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYAVNSIAFHPVHG 264 (347)
T ss_pred CCcchhhhhcCcccceeeEEEEEecCCceEeeeecceEEEEecCCCCccCceeEEEeccCCCCCCceEEecceEeecccc
Confidence 1 125677777777777888888888887776642211 1111 1124578899999999
Q ss_pred EEEEEEcCCeEEEEECCCcceEEEEccCCcc
Q psy4393 210 YILAATLDNTLKLWDSKVVTPAIICSTPLNL 240 (247)
Q Consensus 210 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~ 240 (247)
.|++++.||++.+||.+....+..+....-+
T Consensus 265 tlvTaGsDGtf~FWDkdar~kLk~s~~~~qp 295 (347)
T KOG0647|consen 265 TLVTAGSDGTFSFWDKDARTKLKTSETHPQP 295 (347)
T ss_pred eEEEecCCceEEEecchhhhhhhccCcCCCc
Confidence 9999999999999998776666555444333
No 70
>KOG0277|consensus
Probab=99.96 E-value=2e-27 Score=171.40 Aligned_cols=205 Identities=28% Similarity=0.475 Sum_probs=173.4
Q ss_pred EEEecCCCCeEEEEECC-CCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECC-CCCEEEEEcCCCeEEEEEC
Q psy4393 21 FTLAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS-DSRLLVSGSDDKTLKIWEL 98 (247)
Q Consensus 21 ~~~~~h~~~v~~~~~s~-~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~v~d~ 98 (247)
..++.|...|.++.|++ .++.+++++.|++|++|+...++.+.++.+|...|....|+| ..+.+++++.|+.+++||+
T Consensus 98 ~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdv 177 (311)
T KOG0277|consen 98 HKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDV 177 (311)
T ss_pred hHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCcceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEe
Confidence 34568999999999998 455678889999999999998999999999999999999999 5788999999999999999
Q ss_pred CCceEEEEEecCCccEEEEEEcC-CCCEEEEeeCCCCEEEEECCCC-eEEEeecCCCCCeEEEEECCCC-CEEEEecCCC
Q psy4393 99 SSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVRTG-KCLKTLPAHSDPVSAVHFNRDG-SLIVSSSYDG 175 (247)
Q Consensus 99 ~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~v~d~~~~-~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg 175 (247)
+.......+..|...+.++.|+. +.+.++||+.|+.|+.||++.- .++.++.+|.-.|+.++|+|.. .+|++++.|=
T Consensus 178 r~~gk~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL~gh~~AVRkvk~Sph~~~lLaSasYDm 257 (311)
T KOG0277|consen 178 RSPGKFMSIEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRTPLFELNGHGLAVRKVKFSPHHASLLASASYDM 257 (311)
T ss_pred cCCCceeEEEeccceeEeecccccCCcEEEecCCCceEEEEehhhccccceeecCCceEEEEEecCcchhhHhhhccccc
Confidence 86544445888988999999987 5678999999999999999864 4677888999999999999965 5789999999
Q ss_pred eEEEEeCCCceeeeeeccCCCCCeEEEEECCC-CCEEEEEEcCCeEEEEEC
Q psy4393 176 LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPN-GKYILAATLDNTLKLWDS 225 (247)
Q Consensus 176 ~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~vwd~ 225 (247)
++++||...+.........|..-+..+.|++. +.++|.++-|+.+.||+.
T Consensus 258 T~riw~~~~~ds~~e~~~~HtEFv~g~Dws~~~~~~vAs~gWDe~l~Vw~p 308 (311)
T KOG0277|consen 258 TVRIWDPERQDSAIETVDHHTEFVCGLDWSLFDPGQVASTGWDELLYVWNP 308 (311)
T ss_pred eEEecccccchhhhhhhhccceEEeccccccccCceeeecccccceeeecc
Confidence 99999988655444444455555667888874 568999999999999984
No 71
>KOG0646|consensus
Probab=99.95 E-value=8.2e-27 Score=180.71 Aligned_cols=208 Identities=17% Similarity=0.293 Sum_probs=177.6
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCC------
Q psy4393 27 TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSS------ 100 (247)
Q Consensus 27 ~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~------ 100 (247)
.++|.+++-+|+|.+|+.|+..|.+++|.+.+|..+..+..|...|+++.|+-||.+|++|++||.|.+|++.+
T Consensus 81 Pg~v~al~s~n~G~~l~ag~i~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~~ 160 (476)
T KOG0646|consen 81 PGPVHALASSNLGYFLLAGTISGNLYLWELSSGILLNVLSAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSADN 160 (476)
T ss_pred ccceeeeecCCCceEEEeecccCcEEEEEeccccHHHHHHhhccceeEEEEeCCCcEEEecCCCccEEEEEEEeeccccc
Confidence 57899999999999999998999999999999999999999999999999999999999999999999998642
Q ss_pred ---ceEEEEEecCCccEEEEEEcCC--CCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCCC
Q psy4393 101 ---GKCLKTLKGHSNYVFCCNFNPQ--SNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 175 (247)
Q Consensus 101 ---~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg 175 (247)
-++.+.+..|.-.|..+...+. ...+++++.|..+++||+..+..+..+.- +.++.+++.+|-++.+++|+.+|
T Consensus 161 ~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~f-p~si~av~lDpae~~~yiGt~~G 239 (476)
T KOG0646|consen 161 DHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTITF-PSSIKAVALDPAERVVYIGTEEG 239 (476)
T ss_pred CCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEeccceeeEEEec-CCcceeEEEcccccEEEecCCcc
Confidence 2456777888888988877664 46899999999999999999988777654 56899999999999999999999
Q ss_pred eEEEEeCCCce----------------eeeeeccCC-CCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcceEEEEc
Q psy4393 176 LCRIWDTASGQ----------------CLKTLIDDD-NPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICS 235 (247)
Q Consensus 176 ~i~v~d~~~~~----------------~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 235 (247)
.|.+.++.... ....+..+. ...|++++.+-||.+|++|+.||.|+|||....+.+.++.
T Consensus 240 ~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~DgtlLlSGd~dg~VcvWdi~S~Q~iRtl~ 316 (476)
T KOG0646|consen 240 KIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLAISTDGTLLLSGDEDGKVCVWDIYSKQCIRTLQ 316 (476)
T ss_pred eEEeeehhcCCcccccccccccccccceeeeeccccCCcceeEEEEecCccEEEeeCCCCCEEEEecchHHHHHHHh
Confidence 99988765432 111122222 2589999999999999999999999999998887776655
No 72
>KOG0641|consensus
Probab=99.95 E-value=3.8e-25 Score=157.65 Aligned_cols=217 Identities=27% Similarity=0.477 Sum_probs=173.0
Q ss_pred EEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeE-----EEEEecccCCeEEEEECCC----CCEEEEEc-
Q psy4393 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF-----EKTISGHKLGISDVAWSSD----SRLLVSGS- 88 (247)
Q Consensus 19 ~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~-----~~~~~~~~~~v~~~~~~~~----~~~l~~~~- 88 (247)
+....+-|.+.|.|.+|+|+|+++++|+.|..|++.......+ ...+.-|.+.|.+++|-.+ +..+++++
T Consensus 81 ~~kr~khhkgsiyc~~ws~~geliatgsndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~ga 160 (350)
T KOG0641|consen 81 LCKRNKHHKGSIYCTAWSPCGELIATGSNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGA 160 (350)
T ss_pred EeeeccccCccEEEEEecCccCeEEecCCCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCC
Confidence 3333445789999999999999999999999999976532221 2346668889999999643 34455543
Q ss_pred CCCeEEEEECCCceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecC--C-----CCCeEEEEE
Q psy4393 89 DDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPA--H-----SDPVSAVHF 161 (247)
Q Consensus 89 ~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~--~-----~~~i~~~~~ 161 (247)
.|..|++-|..+++..+.+.+|.+.|..+ ++-++-.+++|+.|.+|++||++-..++..+.. | ...|.+++.
T Consensus 161 gdc~iy~tdc~~g~~~~a~sghtghilal-yswn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~v 239 (350)
T KOG0641|consen 161 GDCKIYITDCGRGQGFHALSGHTGHILAL-YSWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAV 239 (350)
T ss_pred CcceEEEeecCCCCcceeecCCcccEEEE-EEecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEE
Confidence 46677777888888888999999988764 556688999999999999999998887776532 1 246899999
Q ss_pred CCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCc----ceEEEEccC
Q psy4393 162 NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVV----TPAIICSTP 237 (247)
Q Consensus 162 ~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~----~~~~~~~~~ 237 (247)
.|.|++|++|..|....+||++.++.++.+. ++...|.++.|+|...|+++++.|..|++-|++.. .|+.+.+.+
T Consensus 240 dpsgrll~sg~~dssc~lydirg~r~iq~f~-phsadir~vrfsp~a~yllt~syd~~ikltdlqgdla~el~~~vv~eh 318 (350)
T KOG0641|consen 240 DPSGRLLASGHADSSCMLYDIRGGRMIQRFH-PHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGDLAHELPIMVVAEH 318 (350)
T ss_pred CCCcceeeeccCCCceEEEEeeCCceeeeeC-CCccceeEEEeCCCceEEEEecccceEEEeecccchhhcCceEEEEec
Confidence 9999999999999999999999999887764 56678999999999999999999999999998642 355444443
No 73
>KOG0293|consensus
Probab=99.95 E-value=1.2e-26 Score=177.69 Aligned_cols=220 Identities=20% Similarity=0.423 Sum_probs=180.3
Q ss_pred ceEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEe-cccCCeEEEEECCCCCEEEEEcCCCeEEE
Q psy4393 17 YVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS-GHKLGISDVAWSSDSRLLVSGSDDKTLKI 95 (247)
Q Consensus 17 ~~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~v 95 (247)
..+.+++.+|..+|.-+.||||.++|++|+.+..+.+||+.++.....+. ++...+.+++|.|||..+++|+.|+.+..
T Consensus 259 ~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~ 338 (519)
T KOG0293|consen 259 FKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIM 338 (519)
T ss_pred eeeeeeeecccCceEEEEECCCCCeEEecCchHheeeccCCcchhhhhcccCcCCCcceeEEccCCceeEecCCCCcEEE
Confidence 55678889999999999999999999999999999999999998776664 34677999999999999999999999999
Q ss_pred EECCCceEEEEEecC-CccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCC
Q psy4393 96 WELSSGKCLKTLKGH-SNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 174 (247)
Q Consensus 96 ~d~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 174 (247)
||+.. ......++- ...|.+++..+||+.+++.+.|..+++++..+......+. ...++++..++.+++++++--.+
T Consensus 339 wdlDg-n~~~~W~gvr~~~v~dlait~Dgk~vl~v~~d~~i~l~~~e~~~dr~lis-e~~~its~~iS~d~k~~LvnL~~ 416 (519)
T KOG0293|consen 339 WDLDG-NILGNWEGVRDPKVHDLAITYDGKYVLLVTVDKKIRLYNREARVDRGLIS-EEQPITSFSISKDGKLALVNLQD 416 (519)
T ss_pred ecCCc-chhhcccccccceeEEEEEcCCCcEEEEEecccceeeechhhhhhhcccc-ccCceeEEEEcCCCcEEEEEccc
Confidence 99864 333333322 3568999999999999999999999999987655443333 35689999999999999999999
Q ss_pred CeEEEEeCCCceeeeeeccCCCCC--eEEEEEC-CCCCEEEEEEcCCeEEEEECCCcceEEEEccCCc
Q psy4393 175 GLCRIWDTASGQCLKTLIDDDNPP--VSFVKFS-PNGKYILAATLDNTLKLWDSKVVTPAIICSTPLN 239 (247)
Q Consensus 175 g~i~v~d~~~~~~~~~~~~~~~~~--v~~~~~s-~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~ 239 (247)
..+++||+...+.+..+..+..+. |.+ +|. .+..++++|++|+.|+||+...++++.++.+++.
T Consensus 417 qei~LWDl~e~~lv~kY~Ghkq~~fiIrS-CFgg~~~~fiaSGSED~kvyIWhr~sgkll~~LsGHs~ 483 (519)
T KOG0293|consen 417 QEIHLWDLEENKLVRKYFGHKQGHFIIRS-CFGGGNDKFIASGSEDSKVYIWHRISGKLLAVLSGHSK 483 (519)
T ss_pred CeeEEeecchhhHHHHhhcccccceEEEe-ccCCCCcceEEecCCCceEEEEEccCCceeEeecCCcc
Confidence 999999999877666655443322 332 343 4558999999999999999999999999887764
No 74
>KOG0293|consensus
Probab=99.95 E-value=1.2e-26 Score=177.62 Aligned_cols=222 Identities=25% Similarity=0.404 Sum_probs=180.8
Q ss_pred EEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCC---eEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEE
Q psy4393 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG---KFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWE 97 (247)
Q Consensus 21 ~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d 97 (247)
..+..|+..|--+.||++|++||+++.|.+..+|.+... +...++.+|..+|..+.|+||.+++++++.+..+.+||
T Consensus 218 qil~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwD 297 (519)
T KOG0293|consen 218 QILQDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWD 297 (519)
T ss_pred hhHhhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCchHheeecc
Confidence 345689999999999999999999999999999987543 34567789999999999999999999999999999999
Q ss_pred CCCceEEEEEec-CCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCC-CCeEEEEECCCCCEEEEecCCC
Q psy4393 98 LSSGKCLKTLKG-HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHS-DPVSAVHFNRDGSLIVSSSYDG 175 (247)
Q Consensus 98 ~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~-~~i~~~~~~~~~~~l~~~~~dg 175 (247)
+.++.....+.. +...+.+++|.|||..+++|+.|+.+..||+.. ..+...+... ..|.++++++||+++++.+.|.
T Consensus 298 v~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlDg-n~~~~W~gvr~~~v~dlait~Dgk~vl~v~~d~ 376 (519)
T KOG0293|consen 298 VDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLDG-NILGNWEGVRDPKVHDLAITYDGKYVLLVTVDK 376 (519)
T ss_pred CCcchhhhhcccCcCCCcceeEEccCCceeEecCCCCcEEEecCCc-chhhcccccccceeEEEEEcCCCcEEEEEeccc
Confidence 999987765543 356788999999999999999999999999964 3344443322 3589999999999999999999
Q ss_pred eEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcceEEEEccCCcccceee
Q psy4393 176 LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTPLNLNYFYR 245 (247)
Q Consensus 176 ~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~ 245 (247)
.+++|+..+..... ......+|+.+..|.|++++++.-.+..+++||......+.-|.++---+++++
T Consensus 377 ~i~l~~~e~~~dr~--lise~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq~~fiIr 444 (519)
T KOG0293|consen 377 KIRLYNREARVDRG--LISEEQPITSFSISKDGKLALVNLQDQEIHLWDLEENKLVRKYFGHKQGHFIIR 444 (519)
T ss_pred ceeeechhhhhhhc--cccccCceeEEEEcCCCcEEEEEcccCeeEEeecchhhHHHHhhcccccceEEE
Confidence 99999987654332 223456899999999999999999999999999986554444555444444443
No 75
>KOG0640|consensus
Probab=99.95 E-value=1.4e-26 Score=171.72 Aligned_cols=178 Identities=22% Similarity=0.484 Sum_probs=151.8
Q ss_pred CCCceEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEE--EEecccCCeEEEEECCCCCEEEEEcCCC
Q psy4393 14 KPNYVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK--TISGHKLGISDVAWSSDSRLLVSGSDDK 91 (247)
Q Consensus 14 ~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 91 (247)
+.++.+..++..|..+|+++.|+|....|++++.|++|+++|.......+ +......+|.++.|+|.|.+++.|.+-.
T Consensus 159 qa~hPvIRTlYDH~devn~l~FHPre~ILiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp 238 (430)
T KOG0640|consen 159 QARHPVIRTLYDHVDEVNDLDFHPRETILISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHP 238 (430)
T ss_pred ccCCceEeehhhccCcccceeecchhheEEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCC
Confidence 34456778999999999999999999999999999999999986543222 2233456799999999999999999999
Q ss_pred eEEEEECCCceEEEEE---ecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeec-CCCC-CeEEEEECCCCC
Q psy4393 92 TLKIWELSSGKCLKTL---KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLP-AHSD-PVSAVHFNRDGS 166 (247)
Q Consensus 92 ~i~v~d~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~-~i~~~~~~~~~~ 166 (247)
.+++||+++.++...- ..|.+.|.++.+++.+++.++++.||.|++||--+++++..+. +|.+ .|.+..|..+++
T Consensus 239 ~~rlYdv~T~QcfvsanPd~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~k 318 (430)
T KOG0640|consen 239 TLRLYDVNTYQCFVSANPDDQHTGAITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKNGK 318 (430)
T ss_pred ceeEEeccceeEeeecCcccccccceeEEEecCCccEEEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEEccCCe
Confidence 9999999998765432 3567889999999999999999999999999999988887764 5544 688899999999
Q ss_pred EEEEecCCCeEEEEeCCCceeeeee
Q psy4393 167 LIVSSSYDGLCRIWDTASGQCLKTL 191 (247)
Q Consensus 167 ~l~~~~~dg~i~v~d~~~~~~~~~~ 191 (247)
++++.+.|..+++|.+.+++.+..+
T Consensus 319 yiLsSG~DS~vkLWEi~t~R~l~~Y 343 (430)
T KOG0640|consen 319 YILSSGKDSTVKLWEISTGRMLKEY 343 (430)
T ss_pred EEeecCCcceeeeeeecCCceEEEE
Confidence 9999999999999999998776655
No 76
>KOG0313|consensus
Probab=99.95 E-value=6.3e-26 Score=171.86 Aligned_cols=198 Identities=33% Similarity=0.579 Sum_probs=168.8
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCC-------------------------CeEEEEEecccCCeEEEEECC
Q psy4393 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-------------------------GKFEKTISGHKLGISDVAWSS 79 (247)
Q Consensus 25 ~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~-------------------------~~~~~~~~~~~~~v~~~~~~~ 79 (247)
||.++|-++.-.++|.++++|+.|..+.+|+... +..+..+.+|..+|.++.|++
T Consensus 191 GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d 270 (423)
T KOG0313|consen 191 GHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSD 270 (423)
T ss_pred ccccceeEEEecCCCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEEEcC
Confidence 8999999999999999999999999999998211 012345678999999999998
Q ss_pred CCCEEEEEcCCCeEEEEECCCceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCe---EEEeecCCCCCe
Q psy4393 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK---CLKTLPAHSDPV 156 (247)
Q Consensus 80 ~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~---~~~~~~~~~~~i 156 (247)
...+++++.|.+|+.||+.++.....+... ..+.++..+|...++++|+.|..+++||.|++. ....+..|.+.|
T Consensus 271 -~~v~yS~SwDHTIk~WDletg~~~~~~~~~-ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH~nwV 348 (423)
T KOG0313|consen 271 -ATVIYSVSWDHTIKVWDLETGGLKSTLTTN-KSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGHKNWV 348 (423)
T ss_pred -CCceEeecccceEEEEEeecccceeeeecC-cceeEeecccccceeeecCCCCceeecCCCCCCCceeEEeeecchhhh
Confidence 667999999999999999999888777754 458899999999999999999999999999764 345678999999
Q ss_pred EEEEECCCCC-EEEEecCCCeEEEEeCCCce-eeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECC
Q psy4393 157 SAVHFNRDGS-LIVSSSYDGLCRIWDTASGQ-CLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSK 226 (247)
Q Consensus 157 ~~~~~~~~~~-~l~~~~~dg~i~v~d~~~~~-~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~ 226 (247)
.++.|+|... .|++++.|+++++||+++.+ ++..+. .+...|.++.|+. +.++++|+.|++|+|+...
T Consensus 349 ssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI~-~h~DKvl~vdW~~-~~~IvSGGaD~~l~i~~~~ 418 (423)
T KOG0313|consen 349 SSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDIA-GHNDKVLSVDWNE-GGLIVSGGADNKLRIFKGS 418 (423)
T ss_pred hheecCCCCceEEEEEecCCeEEEEEeccCCCcceeec-cCCceEEEEeccC-CceEEeccCcceEEEeccc
Confidence 9999999765 67899999999999999877 555544 4566788999975 5689999999999999754
No 77
>KOG0313|consensus
Probab=99.95 E-value=8e-26 Score=171.31 Aligned_cols=218 Identities=29% Similarity=0.481 Sum_probs=178.0
Q ss_pred eEEEEEecCCCCeEEEEECCCCC---EEEEEeCCCeEEEEecCCCeEE----EEEecccCCeEEEEECCCCCEEEEEcCC
Q psy4393 18 VLKFTLAGHTKAVSSVKFSPNGE---WLASSSADKLIKIWGAYDGKFE----KTISGHKLGISDVAWSSDSRLLVSGSDD 90 (247)
Q Consensus 18 ~~~~~~~~h~~~v~~~~~s~~~~---~l~~~~~dg~v~iw~~~~~~~~----~~~~~~~~~v~~~~~~~~~~~l~~~~~d 90 (247)
...+++.+|.++|.+++|.-... .+++++.|.++++|-...+... ....+|...|.+++..++|..+++|+.|
T Consensus 135 k~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~~~~~~~~~~~~GHk~~V~sVsv~~sgtr~~SgS~D 214 (423)
T KOG0313|consen 135 KSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVGENKVKALKVCRGHKRSVDSVSVDSSGTRFCSGSWD 214 (423)
T ss_pred ceEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCchhhhhHHhHhcccccceeEEEecCCCCeEEeeccc
Confidence 35567779999999988854333 5899999999999987665432 2335899999999999999999999999
Q ss_pred CeEEEEECCC-------------------------ceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeE
Q psy4393 91 KTLKIWELSS-------------------------GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 145 (247)
Q Consensus 91 ~~i~v~d~~~-------------------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~ 145 (247)
..+.+|+..+ +.++-.+.+|..+|.++.|++ ...+++++.|.+|+.||+.++..
T Consensus 215 ~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d-~~v~yS~SwDHTIk~WDletg~~ 293 (423)
T KOG0313|consen 215 TMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSD-ATVIYSVSWDHTIKVWDLETGGL 293 (423)
T ss_pred ceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEEEcC-CCceEeecccceEEEEEeecccc
Confidence 9999999321 123445678999999999998 67899999999999999999998
Q ss_pred EEeecCCCCCeEEEEECCCCCEEEEecCCCeEEEEeCCCce--eeeeeccCCCCCeEEEEECCCCC-EEEEEEcCCeEEE
Q psy4393 146 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ--CLKTLIDDDNPPVSFVKFSPNGK-YILAATLDNTLKL 222 (247)
Q Consensus 146 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~--~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~v 222 (247)
+..+.. ..+..++.++|...+|++|+.|..+++||.+++. ....-+..|..-|..+.|+|... +|++++.||++++
T Consensus 294 ~~~~~~-~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~kl 372 (423)
T KOG0313|consen 294 KSTLTT-NKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKL 372 (423)
T ss_pred eeeeec-CcceeEeecccccceeeecCCCCceeecCCCCCCCceeEEeeecchhhhhheecCCCCceEEEEEecCCeEEE
Confidence 877765 4578999999999999999999999999998764 33333445566789999999765 5678899999999
Q ss_pred EECCCcc-eEEEEccC
Q psy4393 223 WDSKVVT-PAIICSTP 237 (247)
Q Consensus 223 wd~~~~~-~~~~~~~~ 237 (247)
||.|... |+-.+.++
T Consensus 373 WDvRS~k~plydI~~h 388 (423)
T KOG0313|consen 373 WDVRSTKAPLYDIAGH 388 (423)
T ss_pred EEeccCCCcceeeccC
Confidence 9999876 77766664
No 78
>KOG0772|consensus
Probab=99.95 E-value=1.5e-26 Score=181.45 Aligned_cols=218 Identities=26% Similarity=0.466 Sum_probs=168.1
Q ss_pred CceEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeE----EEEE-ecccCCeEEEEECCCCCEEEEEcCC
Q psy4393 16 NYVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF----EKTI-SGHKLGISDVAWSSDSRLLVSGSDD 90 (247)
Q Consensus 16 ~~~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~----~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d 90 (247)
.+.....+..|+..|+++++.|.|.++++|+.|-.|++||...... -..+ ......|.++.|++.|..|++.+..
T Consensus 156 P~shEi~l~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~ 235 (641)
T KOG0772|consen 156 PGSHEIQLKHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSGS 235 (641)
T ss_pred CccceEeccCCceEEEEeeecCCCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEecC
Confidence 3556677888999999999999999999999999999999754221 1122 2334569999999999999999999
Q ss_pred CeEEEEECCCceEEE------------EEecCCccEEEEEEcCCC-CEEEEeeCCCCEEEEECCCCeE-EEeec-----C
Q psy4393 91 KTLKIWELSSGKCLK------------TLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVRTGKC-LKTLP-----A 151 (247)
Q Consensus 91 ~~i~v~d~~~~~~~~------------~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~v~d~~~~~~-~~~~~-----~ 151 (247)
...+++|-.....+. ..++|...+.|-+|+|.. +.+++++.||++++||+...+. ..+++ .
T Consensus 236 aqakl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g 315 (641)
T KOG0772|consen 236 AQAKLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGG 315 (641)
T ss_pred cceeEEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCC
Confidence 999999965433322 235778889999999965 5788999999999999976542 22332 2
Q ss_pred CCCCeEEEEECCCCCEEEEecCCCeEEEEeCCCcee--eeeeccCCC--CCeEEEEECCCCCEEEEEEcCCeEEEEECCC
Q psy4393 152 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC--LKTLIDDDN--PPVSFVKFSPNGKYILAATLDNTLKLWDSKV 227 (247)
Q Consensus 152 ~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~--~~~~~~~~~--~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~ 227 (247)
..-+++..+|+|+++++|+|+.||.|.+|+..+... ...+...|. ..|+++.||+||++|++=+.|+++++||+++
T Consensus 316 ~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq 395 (641)
T KOG0772|consen 316 KRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQ 395 (641)
T ss_pred cccCceeeecCCCcchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeeccc
Confidence 234678889999999999999999999999865332 222223333 4799999999999999999999999999987
Q ss_pred c-ceEEE
Q psy4393 228 V-TPAII 233 (247)
Q Consensus 228 ~-~~~~~ 233 (247)
. +|+.+
T Consensus 396 ~kkpL~~ 402 (641)
T KOG0772|consen 396 FKKPLNV 402 (641)
T ss_pred cccchhh
Confidence 5 34433
No 79
>KOG0269|consensus
Probab=99.95 E-value=2.4e-27 Score=193.61 Aligned_cols=212 Identities=24% Similarity=0.462 Sum_probs=174.8
Q ss_pred CCeEEEEECC-CCCEEEEEeCCCeEEEEecCC---CeEEEEEecccCCeEEEEECCC-CCEEEEEcCCCeEEEEECCCce
Q psy4393 28 KAVSSVKFSP-NGEWLASSSADKLIKIWGAYD---GKFEKTISGHKLGISDVAWSSD-SRLLVSGSDDKTLKIWELSSGK 102 (247)
Q Consensus 28 ~~v~~~~~s~-~~~~l~~~~~dg~v~iw~~~~---~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~v~d~~~~~ 102 (247)
..+..++|.. +.++||+++.+|.|.+||+.. .+....+..|...++++.|++. -.+|++|++||.|++||++..+
T Consensus 88 ~S~~DVkW~~~~~NlIAT~s~nG~i~vWdlnk~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~ 167 (839)
T KOG0269|consen 88 YSAADVKWGQLYSNLIATCSTNGVISVWDLNKSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKK 167 (839)
T ss_pred eehhhcccccchhhhheeecCCCcEEEEecCccccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeeccc
Confidence 3455688875 567899999999999999865 3444567789999999999984 4678999999999999999888
Q ss_pred EEEEEecCCccEEEEEEcC-CCCEEEEeeCCCCEEEEECCCCe-EEEeecCCCCCeEEEEECCCCCEEEEecCCCeEEEE
Q psy4393 103 CLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVRTGK-CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 180 (247)
Q Consensus 103 ~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~v~d~~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~ 180 (247)
....+.+....|+.+.|+| .+..++++...|.+++||+|... +...+.+|.++|.|+.|+|++.+||+|+.|+.|+||
T Consensus 168 S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiW 247 (839)
T KOG0269|consen 168 SKSTFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIW 247 (839)
T ss_pred ccccccccchhhhceeeccCCCceEEEecCCceEEEeeccCchhHHHHhhcccCceEEEeecCCCceeeecCCCccEEEE
Confidence 8778888888999999998 56789999999999999999754 566788999999999999999999999999999999
Q ss_pred eCCCceeeeeeccCCCCCeEEEEECCCCCEE-EEEE--cCCeEEEEECCCc-ceEEEEccCCc
Q psy4393 181 DTASGQCLKTLIDDDNPPVSFVKFSPNGKYI-LAAT--LDNTLKLWDSKVV-TPAIICSTPLN 239 (247)
Q Consensus 181 d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~--~dg~i~vwd~~~~-~~~~~~~~~~~ 239 (247)
|..+.+...........++..++|-|..++. ++++ .|-.|+|||++-. -|..++..+.+
T Consensus 248 d~t~~~~~~~~tInTiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRPYIP~~t~~eH~~ 310 (839)
T KOG0269|consen 248 DMTDSRAKPKHTINTIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVRRPYIPYATFLEHTD 310 (839)
T ss_pred eccCCCccceeEEeecceeeeeeeccCccchhhhhhccccceEEEEeeccccccceeeeccCc
Confidence 9987654443333456789999999987754 4544 4779999999865 47766666554
No 80
>KOG0305|consensus
Probab=99.95 E-value=6.3e-26 Score=181.96 Aligned_cols=210 Identities=26% Similarity=0.429 Sum_probs=183.9
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEec-ccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceEEE
Q psy4393 27 TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG-HKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLK 105 (247)
Q Consensus 27 ~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~ 105 (247)
...|+++.|+++|.+|++|..+|.|.|||..+.+....+.+ |...|-+++|. +..+.+|+.++.|..+|++..+...
T Consensus 217 ~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~~~~~~~h~~rvg~laW~--~~~lssGsr~~~I~~~dvR~~~~~~ 294 (484)
T KOG0305|consen 217 EELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKTRTLRGSHASRVGSLAWN--SSVLSSGSRDGKILNHDVRISQHVV 294 (484)
T ss_pred CCceEEEEECCCCCEEEEeecCCeEEEEehhhccccccccCCcCceeEEEecc--CceEEEecCCCcEEEEEEecchhhh
Confidence 78999999999999999999999999999988888888888 88899999998 6778999999999999998876444
Q ss_pred E-EecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCC-CCEEEEec--CCCeEEEEe
Q psy4393 106 T-LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRD-GSLIVSSS--YDGLCRIWD 181 (247)
Q Consensus 106 ~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~--~dg~i~v~d 181 (247)
. +.+|...|..+.|++++.++|+|+.|+.+.|||.....++..+..|...|.+++|+|- ..+||+|+ .|+.|++||
T Consensus 295 ~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn 374 (484)
T KOG0305|consen 295 STLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWN 374 (484)
T ss_pred hhhhcccceeeeeEECCCCCeeccCCCccceEeccCCCccccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEE
Confidence 3 7889999999999999999999999999999999888888899999999999999994 45788765 689999999
Q ss_pred CCCceeeeeeccCCCCCeEEEEECCCCCEEEEE--EcCCeEEEEECCCcceEEEEccCCcc
Q psy4393 182 TASGQCLKTLIDDDNPPVSFVKFSPNGKYILAA--TLDNTLKLWDSKVVTPAIICSTPLNL 240 (247)
Q Consensus 182 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~--~~dg~i~vwd~~~~~~~~~~~~~~~~ 240 (247)
..+++.+... .....|..+.|++..+.|+++ ..++.|.||+..+.++...+..|..-
T Consensus 375 ~~~g~~i~~v--dtgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps~~~~~~l~gH~~R 433 (484)
T KOG0305|consen 375 TNTGARIDSV--DTGSQVCSLIWSKKYKELLSTHGYSENQITLWKYPSMKLVAELLGHTSR 433 (484)
T ss_pred cCCCcEeccc--ccCCceeeEEEcCCCCEEEEecCCCCCcEEEEeccccceeeeecCCcce
Confidence 9999877655 335689999999998777764 46789999999988888777776553
No 81
>KOG0289|consensus
Probab=99.95 E-value=6.1e-26 Score=174.66 Aligned_cols=210 Identities=20% Similarity=0.387 Sum_probs=186.7
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceEEEE
Q psy4393 27 TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKT 106 (247)
Q Consensus 27 ~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~ 106 (247)
...++++...|....+++|+.|..+.++|...++.+..+.+|...|+++.++|+...+++++.|..|++|..........
T Consensus 219 ~pgi~ald~~~s~~~ilTGG~d~~av~~d~~s~q~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~s~~~~ 298 (506)
T KOG0289|consen 219 TPGITALDIIPSSSKILTGGEDKTAVLFDKPSNQILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLSSEPTS 298 (506)
T ss_pred CCCeeEEeecCCCCcceecCCCCceEEEecchhhhhhhccCcceEEEEEEeccchhheeecCCcceEEeeccccccCccc
Confidence 46788888888878899999999999999999999999999999999999999999999999999999999988777778
Q ss_pred EecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCC--CCCeEEEEECCCCCEEEEecCCCeEEEEeCCC
Q psy4393 107 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAH--SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 184 (247)
Q Consensus 107 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~--~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~ 184 (247)
...|..+|..+..+|.|.++++++.|+.+.+.|++++..+...... .-.+++.+|+|||.+|.+|..||.+++||+.+
T Consensus 299 ~~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks 378 (506)
T KOG0289|consen 299 SRPHEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKS 378 (506)
T ss_pred cccccccceeeeeccCCcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEEEEcCC
Confidence 8899999999999999999999999999999999999987766543 23579999999999999999999999999999
Q ss_pred ceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcceEEEEccC
Q psy4393 185 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTP 237 (247)
Q Consensus 185 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~ 237 (247)
+.....+ ..|.++|..++|+.+|-||++++.|+.|++||+|-...+.+++.+
T Consensus 379 ~~~~a~F-pght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~kt~~l~ 430 (506)
T KOG0289|consen 379 QTNVAKF-PGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKNFKTIQLD 430 (506)
T ss_pred ccccccC-CCCCCceeEEEeccCceEEEEEecCCeEEEEEehhhcccceeecc
Confidence 8866554 458899999999999999999999999999999866555554443
No 82
>KOG0281|consensus
Probab=99.95 E-value=1.1e-27 Score=179.94 Aligned_cols=203 Identities=26% Similarity=0.500 Sum_probs=174.4
Q ss_pred CCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceEEE
Q psy4393 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLK 105 (247)
Q Consensus 26 h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~ 105 (247)
...+|.|+.+. .+.+++|..|.+|++||..+..+...+.+|.+.|.++.+. .+.|++|+.|.+|++||+++++++.
T Consensus 196 ~skgVYClQYD--D~kiVSGlrDnTikiWD~n~~~c~~~L~GHtGSVLCLqyd--~rviisGSSDsTvrvWDv~tge~l~ 271 (499)
T KOG0281|consen 196 NSKGVYCLQYD--DEKIVSGLRDNTIKIWDKNSLECLKILTGHTGSVLCLQYD--ERVIVSGSSDSTVRVWDVNTGEPLN 271 (499)
T ss_pred cCCceEEEEec--chhhhcccccCceEEeccccHHHHHhhhcCCCcEEeeecc--ceEEEecCCCceEEEEeccCCchhh
Confidence 35779998884 5678999999999999998888888999999999999886 4689999999999999999999999
Q ss_pred EEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEE---EeecCCCCCeEEEEECCCCCEEEEecCCCeEEEEeC
Q psy4393 106 TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCL---KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 182 (247)
Q Consensus 106 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~---~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~ 182 (247)
.+..|...|..+.|+. .++++++.|.++.+||+.+...+ ..+.+|...|..+.|+ .+++++++.|.+|++|++
T Consensus 272 tlihHceaVLhlrf~n--g~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd--~kyIVsASgDRTikvW~~ 347 (499)
T KOG0281|consen 272 TLIHHCEAVLHLRFSN--GYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWST 347 (499)
T ss_pred HHhhhcceeEEEEEeC--CEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccc--cceEEEecCCceEEEEec
Confidence 9999999999999984 69999999999999999876532 3467888999999885 469999999999999999
Q ss_pred CCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcceEEEEccCCc
Q psy4393 183 ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTPLN 239 (247)
Q Consensus 183 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~ 239 (247)
.+.+.++++. .+...|.|+.+ .++++++|+.|++|++||...+..+.+++++-+
T Consensus 348 st~efvRtl~-gHkRGIAClQY--r~rlvVSGSSDntIRlwdi~~G~cLRvLeGHEe 401 (499)
T KOG0281|consen 348 STCEFVRTLN-GHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE 401 (499)
T ss_pred cceeeehhhh-cccccceehhc--cCeEEEecCCCceEEEEeccccHHHHHHhchHH
Confidence 9999887654 45566777765 478999999999999999988877776666544
No 83
>KOG0306|consensus
Probab=99.95 E-value=1.7e-25 Score=182.40 Aligned_cols=229 Identities=24% Similarity=0.391 Sum_probs=193.9
Q ss_pred CCCCceEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCe
Q psy4393 13 PKPNYVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKT 92 (247)
Q Consensus 13 ~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 92 (247)
|++.-....++.+|...|.+++++.+...+++| ..+.+++|+..+.++..++... .+.+..|.|.++++++|..+|.
T Consensus 359 p~~~~~~~i~~~GHR~dVRsl~vS~d~~~~~Sg-a~~SikiWn~~t~kciRTi~~~--y~l~~~Fvpgd~~Iv~G~k~Ge 435 (888)
T KOG0306|consen 359 PEADRTSNIEIGGHRSDVRSLCVSSDSILLASG-AGESIKIWNRDTLKCIRTITCG--YILASKFVPGDRYIVLGTKNGE 435 (888)
T ss_pred ccccccceeeeccchhheeEEEeecCceeeeec-CCCcEEEEEccCcceeEEeccc--cEEEEEecCCCceEEEeccCCc
Confidence 566666778888999999999999988777765 5678999999999988888643 6888899999999999999999
Q ss_pred EEEEECCCceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCC-----CeEEEeec-------CCCCCeEEEE
Q psy4393 93 LKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT-----GKCLKTLP-------AHSDPVSAVH 160 (247)
Q Consensus 93 i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~-----~~~~~~~~-------~~~~~i~~~~ 160 (247)
+.+||+.....+..+++|.+.++.++..|++..+++|+.|.+|++||..- +...+.+. .-+..|.|+.
T Consensus 436 l~vfdlaS~~l~Eti~AHdgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~ 515 (888)
T KOG0306|consen 436 LQVFDLASASLVETIRAHDGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVS 515 (888)
T ss_pred eEEEEeehhhhhhhhhccccceeeeeecCCCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEE
Confidence 99999999888888899999999999999999999999999999998741 11111111 1245789999
Q ss_pred ECCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcceEEEEccCCcc
Q psy4393 161 FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTPLNL 240 (247)
Q Consensus 161 ~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~ 240 (247)
++|||++|+++-.|.++++|-+.+-+..-.+ .+|.-||.++..+||++++++|+.|.+|+||-.+-+++...+-++-+.
T Consensus 516 ~Spdgk~LaVsLLdnTVkVyflDtlKFflsL-YGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDCHKS~fAHdDS 594 (888)
T KOG0306|consen 516 VSPDGKLLAVSLLDNTVKVYFLDTLKFFLSL-YGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCHKSFFAHDDS 594 (888)
T ss_pred EcCCCcEEEEEeccCeEEEEEecceeeeeee-cccccceeEEeccCCcCeEEeccCCCceEEeccccchhhhhhhcccCc
Confidence 9999999999999999999999887755444 467889999999999999999999999999999999888887776553
Q ss_pred ---cceee
Q psy4393 241 ---NYFYR 245 (247)
Q Consensus 241 ---~~~~~ 245 (247)
.+|+|
T Consensus 595 vm~V~F~P 602 (888)
T KOG0306|consen 595 VMSVQFLP 602 (888)
T ss_pred eeEEEEcc
Confidence 55655
No 84
>KOG0300|consensus
Probab=99.95 E-value=3.1e-26 Score=170.49 Aligned_cols=226 Identities=26% Similarity=0.453 Sum_probs=195.0
Q ss_pred ceEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEE
Q psy4393 17 YVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIW 96 (247)
Q Consensus 17 ~~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~ 96 (247)
..+...+.||..+|..++-......+.+++.|.+-+||.++.+.++..+.+|.+.|+++.|++.+.++++++.|++-+||
T Consensus 138 ~~lvre~~GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Esg~CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHIW 217 (481)
T KOG0300|consen 138 FRLVRELEGHKDGIWHVAADSTQPICGTASADHTARIWSLESGACLATYTGHTGSVNSIKFHNSGLLLLTASGDETAHIW 217 (481)
T ss_pred EeehhhhcccccceeeehhhcCCcceeecccccceeEEeeccccceeeecccccceeeEEeccccceEEEccCCcchHHH
Confidence 34445567999999999988877888999999999999999999999999999999999999999999999999999999
Q ss_pred EC------CC------------------------------c----eEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEE
Q psy4393 97 EL------SS------------------------------G----KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 136 (247)
Q Consensus 97 d~------~~------------------------------~----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 136 (247)
.. .. + .++..+++|.+.|.++.|-..++.+++++.|++-.
T Consensus 218 ~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAn 297 (481)
T KOG0300|consen 218 KAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDRTAN 297 (481)
T ss_pred HHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeeccccce
Confidence 61 10 0 12345678888999999999999999999999999
Q ss_pred EEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEc
Q psy4393 137 IWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATL 216 (247)
Q Consensus 137 v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~ 216 (247)
+||+++++.+..+.+|....+..+-+|..+++++.+.|.+.++||.+..-.-...+.++...|+...|.-+. .+++|+.
T Consensus 298 lwDVEtge~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFReaI~sV~VFQGHtdtVTS~vF~~dd-~vVSgSD 376 (481)
T KOG0300|consen 298 LWDVETGEVVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFREAIQSVAVFQGHTDTVTSVVFNTDD-RVVSGSD 376 (481)
T ss_pred eeeeccCceeccccCcchhccccccCCcceEEEEeccCceeEeccchhhcceeeeecccccceeEEEEecCC-ceeecCC
Confidence 999999999999999999999889999999999999999999999985433344466777889999998875 5889999
Q ss_pred CCeEEEEECCCc-ceEEEEccCCcccce
Q psy4393 217 DNTLKLWDSKVV-TPAIICSTPLNLNYF 243 (247)
Q Consensus 217 dg~i~vwd~~~~-~~~~~~~~~~~~~~~ 243 (247)
|.+|+|||++.+ .|+-++++.+..|-+
T Consensus 377 DrTvKvWdLrNMRsplATIRtdS~~NRv 404 (481)
T KOG0300|consen 377 DRTVKVWDLRNMRSPLATIRTDSPANRV 404 (481)
T ss_pred CceEEEeeeccccCcceeeecCCcccee
Confidence 999999999877 688888887776643
No 85
>KOG0288|consensus
Probab=99.95 E-value=2.2e-26 Score=175.97 Aligned_cols=218 Identities=26% Similarity=0.447 Sum_probs=183.6
Q ss_pred EEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEEC
Q psy4393 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWEL 98 (247)
Q Consensus 19 ~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~ 98 (247)
..-++.+..++|+++.|.+++.++++++.|+.+++|+....+....+.+|...|+++.|......+++++.|.+|++||+
T Consensus 211 ~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r~Wnvd~~r~~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl 290 (459)
T KOG0288|consen 211 LISTLAGSLGNITSIDFDSDNKHVIAASNDKNLRLWNVDSLRLRHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDL 290 (459)
T ss_pred hhhhhhccCCCcceeeecCCCceEEeecCCCceeeeeccchhhhhhhcccccceeeehhhccccceeeccccchhhhhhh
Confidence 34456677889999999999999999999999999999999999999999999999999887777999999999999999
Q ss_pred CCceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCCCeEE
Q psy4393 99 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCR 178 (247)
Q Consensus 99 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~ 178 (247)
....+.+++-. .+.+..+..+ ...+++|-.|+.|++||.++..+......+. .|+++..++++..+.+++.|..+.
T Consensus 291 ~k~~C~kt~l~-~S~cnDI~~~--~~~~~SgH~DkkvRfwD~Rs~~~~~sv~~gg-~vtSl~ls~~g~~lLsssRDdtl~ 366 (459)
T KOG0288|consen 291 QKAYCSKTVLP-GSQCNDIVCS--ISDVISGHFDKKVRFWDIRSADKTRSVPLGG-RVTSLDLSMDGLELLSSSRDDTLK 366 (459)
T ss_pred hhhheeccccc-cccccceEec--ceeeeecccccceEEEeccCCceeeEeecCc-ceeeEeeccCCeEEeeecCCCcee
Confidence 98777665542 2334444444 5678899999999999999999888888764 899999999999999999999999
Q ss_pred EEeCCCceeeeeeccC---CCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcceEEEEccCCcc
Q psy4393 179 IWDTASGQCLKTLIDD---DNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTPLNL 240 (247)
Q Consensus 179 v~d~~~~~~~~~~~~~---~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~ 240 (247)
++|+++.+....+... ....++.+.|||++.|+++|+.||.|+||+..+++...+...+.+.
T Consensus 367 viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s~s~ 431 (459)
T KOG0288|consen 367 VIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADGSVYIWSVFTGKLEKVLSLSTSN 431 (459)
T ss_pred eeecccccEEEEeeccccccccccceeEECCCCceeeeccCCCcEEEEEccCceEEEEeccCCCC
Confidence 9999998766655322 2344778899999999999999999999999998876666555543
No 86
>KOG0264|consensus
Probab=99.95 E-value=2.1e-25 Score=172.37 Aligned_cols=204 Identities=23% Similarity=0.392 Sum_probs=165.5
Q ss_pred ecCCCCeEEEEECCCCC-EEEEEeCCCeEEEEecCCCe----------EEEEEecccCCeEEEEECCC-CCEEEEEcCCC
Q psy4393 24 AGHTKAVSSVKFSPNGE-WLASSSADKLIKIWGAYDGK----------FEKTISGHKLGISDVAWSSD-SRLLVSGSDDK 91 (247)
Q Consensus 24 ~~h~~~v~~~~~s~~~~-~l~~~~~dg~v~iw~~~~~~----------~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~ 91 (247)
-.|.+.|..+++.|... .+|+.+..+.+.|||..... ....+.+|...-.++.|++. .-.+++++.|+
T Consensus 121 i~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~d~ 200 (422)
T KOG0264|consen 121 INHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSDDH 200 (422)
T ss_pred ccCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeeccCCC
Confidence 36999999999999766 55667888999999975321 12267788776778999985 44689999999
Q ss_pred eEEEEECCCce-------EEEEEecCCccEEEEEEcCC-CCEEEEeeCCCCEEEEECC--CCeEEEeecCCCCCeEEEEE
Q psy4393 92 TLKIWELSSGK-------CLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVR--TGKCLKTLPAHSDPVSAVHF 161 (247)
Q Consensus 92 ~i~v~d~~~~~-------~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~v~d~~--~~~~~~~~~~~~~~i~~~~~ 161 (247)
.|++||+.... ....+.+|...|..++|++. ..++++++.|+.+.|||+| +.++.....+|.+.+.|++|
T Consensus 201 ~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~f 280 (422)
T KOG0264|consen 201 TICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAF 280 (422)
T ss_pred cEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCcccccccCCceeEEEe
Confidence 99999987532 33467789999999999984 4678899999999999999 45556677899999999999
Q ss_pred CCC-CCEEEEecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCC-EEEEEEcCCeEEEEECCC
Q psy4393 162 NRD-GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK-YILAATLDNTLKLWDSKV 227 (247)
Q Consensus 162 ~~~-~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~vwd~~~ 227 (247)
+|- +..||+|+.|+.|.+||+|+.......+..+...|..+.|+|+.. .||+++.|+++.|||+..
T Consensus 281 np~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ 348 (422)
T KOG0264|consen 281 NPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSR 348 (422)
T ss_pred CCCCCceEEeccCCCcEEEeechhcccCceeccCCCcceEEEEeCCCCCceeEecccCCcEEEEeccc
Confidence 995 557889999999999999986654444566778899999999864 677888999999999864
No 87
>KOG0310|consensus
Probab=99.94 E-value=6.9e-25 Score=170.94 Aligned_cols=199 Identities=25% Similarity=0.402 Sum_probs=169.7
Q ss_pred EecCCCCeEEEEECCCCC-EEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCC-EEEEEcCCCeEEEEECCC
Q psy4393 23 LAGHTKAVSSVKFSPNGE-WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR-LLVSGSDDKTLKIWELSS 100 (247)
Q Consensus 23 ~~~h~~~v~~~~~s~~~~-~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~v~d~~~ 100 (247)
+.+|+.+|..+.|+|+++ .+++|+.|+.+++||+.+...+..+.+|...|.+.+|+|... .+++|+-||.|++||.+.
T Consensus 106 ~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~ 185 (487)
T KOG0310|consen 106 LYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRS 185 (487)
T ss_pred HhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEecc
Confidence 357999999999999655 667788889999999998887668999999999999999655 788999999999999987
Q ss_pred c-eEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCC-eEEEeecCCCCCeEEEEECCCCCEEEEecCCCeEE
Q psy4393 101 G-KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG-KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCR 178 (247)
Q Consensus 101 ~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~ 178 (247)
. ..+..+ .|..+|..+.+-|.|.++++++. ..+++||+.+| +.+..+..|...|+|+++..++..|++++.|+.++
T Consensus 186 ~~~~v~el-nhg~pVe~vl~lpsgs~iasAgG-n~vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~~~rLlS~sLD~~VK 263 (487)
T KOG0310|consen 186 LTSRVVEL-NHGCPVESVLALPSGSLIASAGG-NSVKVWDLTTGGQLLTSMFNHNKTVTCLRLASDSTRLLSGSLDRHVK 263 (487)
T ss_pred CCceeEEe-cCCCceeeEEEcCCCCEEEEcCC-CeEEEEEecCCceehhhhhcccceEEEEEeecCCceEeecccccceE
Confidence 6 444444 47788999999999999999864 57999999855 45555556999999999999999999999999999
Q ss_pred EEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEEC
Q psy4393 179 IWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225 (247)
Q Consensus 179 v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~ 225 (247)
+||..+.+.+..+. -.++|..++.+|+++.++.|..+|.+.+=+.
T Consensus 264 Vfd~t~~Kvv~s~~--~~~pvLsiavs~dd~t~viGmsnGlv~~rr~ 308 (487)
T KOG0310|consen 264 VFDTTNYKVVHSWK--YPGPVLSIAVSPDDQTVVIGMSNGLVSIRRR 308 (487)
T ss_pred EEEccceEEEEeee--cccceeeEEecCCCceEEEecccceeeeehh
Confidence 99988888777663 3468999999999999999999998887743
No 88
>KOG0308|consensus
Probab=99.94 E-value=2.8e-26 Score=184.31 Aligned_cols=213 Identities=24% Similarity=0.533 Sum_probs=179.6
Q ss_pred CCCCeE---EEEEC-CCCCEEEEEeCCCeEEEEecCCCe------EEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEE
Q psy4393 26 HTKAVS---SVKFS-PNGEWLASSSADKLIKIWGAYDGK------FEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKI 95 (247)
Q Consensus 26 h~~~v~---~~~~s-~~~~~l~~~~~dg~v~iw~~~~~~------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v 95 (247)
|...|. .+..+ |.+++|++|++||.|++|+..... ....+..|..-|.++..+.+++.+++++.|-+|++
T Consensus 20 n~~~v~~~~~Lq~da~~~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~SsDtTVK~ 99 (735)
T KOG0308|consen 20 NRNGVNITKALQLDAPNGRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISASSDTTVKV 99 (735)
T ss_pred ccccccchhhccccCCCCceEEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEecCCceEEE
Confidence 444555 45554 466789999999999999875322 34567778888999999999999999999999999
Q ss_pred EECCCc--eEEEEEecCCccEEEEEE-cCCCCEEEEeeCCCCEEEEECCCCeE--E--------Eeec-CCCCCeEEEEE
Q psy4393 96 WELSSG--KCLKTLKGHSNYVFCCNF-NPQSNLIVSGSFDESVRIWDVRTGKC--L--------KTLP-AHSDPVSAVHF 161 (247)
Q Consensus 96 ~d~~~~--~~~~~~~~~~~~v~~~~~-~~~~~~l~~~~~d~~i~v~d~~~~~~--~--------~~~~-~~~~~i~~~~~ 161 (247)
|+...+ -+...++.|.+.|.|++. .++..++|+|+-|+.|.+||+.++.. + ..+. ++..++.+++.
T Consensus 100 W~~~~~~~~c~stir~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~ 179 (735)
T KOG0308|consen 100 WNAHKDNTFCMSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAM 179 (735)
T ss_pred eecccCcchhHhhhhcccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeec
Confidence 999876 467788899999999999 78889999999999999999997732 1 1222 56678999999
Q ss_pred CCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcceEEEEccCCc
Q psy4393 162 NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTPLN 239 (247)
Q Consensus 162 ~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~ 239 (247)
++.|..+++|+.++.+++||.++.+.+..+. +|...|..+..++||..+++++.||+|++||+....++-++..|.+
T Consensus 180 N~t~t~ivsGgtek~lr~wDprt~~kimkLr-GHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQrCl~T~~vH~e 256 (735)
T KOG0308|consen 180 NQTGTIIVSGGTEKDLRLWDPRTCKKIMKLR-GHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQRCLATYIVHKE 256 (735)
T ss_pred CCcceEEEecCcccceEEeccccccceeeee-ccccceEEEEEcCCCCeEeecCCCceEEeeeccccceeeeEEeccC
Confidence 9999999999999999999999988776665 7778899999999999999999999999999999998888887765
No 89
>KOG0299|consensus
Probab=99.94 E-value=2.4e-25 Score=172.39 Aligned_cols=202 Identities=21% Similarity=0.395 Sum_probs=177.2
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceEE
Q psy4393 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCL 104 (247)
Q Consensus 25 ~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~ 104 (247)
+|.+.+.+++.++||++|++|+.|..|.||+..+.+....+.+|...|.+++|......+++++.|+.+++|++.....+
T Consensus 200 ~h~keil~~avS~Dgkylatgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~v 279 (479)
T KOG0299|consen 200 GHVKEILTLAVSSDGKYLATGGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYV 279 (479)
T ss_pred cccceeEEEEEcCCCcEEEecCCCceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhHhHHH
Confidence 89999999999999999999999999999999999999999999999999999988888999999999999999988888
Q ss_pred EEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCCCeEEEEeCCC
Q psy4393 105 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 184 (247)
Q Consensus 105 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~ 184 (247)
.++.+|.+.|..+....-+..+..|+.|+++++|++... ....+.++.+.+.|++|- +..++++|+.+|.|.+|++..
T Consensus 280 etlyGHqd~v~~IdaL~reR~vtVGgrDrT~rlwKi~ee-sqlifrg~~~sidcv~~I-n~~HfvsGSdnG~IaLWs~~K 357 (479)
T KOG0299|consen 280 ETLYGHQDGVLGIDALSRERCVTVGGRDRTVRLWKIPEE-SQLIFRGGEGSIDCVAFI-NDEHFVSGSDNGSIALWSLLK 357 (479)
T ss_pred HHHhCCccceeeechhcccceEEeccccceeEEEecccc-ceeeeeCCCCCeeeEEEe-cccceeeccCCceEEEeeecc
Confidence 889999999999988887787888889999999999543 334566778889999986 456799999999999999998
Q ss_pred ceeeeeeccCCC-----------CCeEEEEECCCCCEEEEEEcCCeEEEEECCCc
Q psy4393 185 GQCLKTLIDDDN-----------PPVSFVKFSPNGKYILAATLDNTLKLWDSKVV 228 (247)
Q Consensus 185 ~~~~~~~~~~~~-----------~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~ 228 (247)
.+++......|. .-|+.++..|...++++|+.+|.|++|-..++
T Consensus 358 Kkplf~~~~AHgv~~~~~~~~~~~Witsla~i~~sdL~asGS~~G~vrLW~i~~g 412 (479)
T KOG0299|consen 358 KKPLFTSRLAHGVIPELDPVNGNFWITSLAVIPGSDLLASGSWSGCVRLWKIEDG 412 (479)
T ss_pred cCceeEeeccccccCCccccccccceeeeEecccCceEEecCCCCceEEEEecCC
Confidence 887766533221 14778999999999999999999999988776
No 90
>KOG0274|consensus
Probab=99.94 E-value=7.9e-25 Score=181.08 Aligned_cols=206 Identities=34% Similarity=0.660 Sum_probs=184.9
Q ss_pred CCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEE-EecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceEE
Q psy4393 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT-ISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCL 104 (247)
Q Consensus 26 h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~ 104 (247)
|...+.+..|. +.++++++.+..+++|+..++..... +.+|.+.|.++.+..-+..+++|+.|.++++||..++++.
T Consensus 207 ~~~~~~~~q~~--~~~~~~~s~~~tl~~~~~~~~~~i~~~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~C~ 284 (537)
T KOG0274|consen 207 DDHVVLCLQLH--DGFFKSGSDDSTLHLWDLNNGYLILTRLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGECT 284 (537)
T ss_pred Ccchhhhheee--cCeEEecCCCceeEEeecccceEEEeeccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCCCcEE
Confidence 45667788887 56788899999999999999888877 9999999999999887889999999999999999999999
Q ss_pred EEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCCCeEEEEeCCC
Q psy4393 105 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 184 (247)
Q Consensus 105 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~ 184 (247)
..+.+|.+.+.++...+ ..+++|+.|..|++|+++++..+..+.+|.++|.++..+ +.++++|+.|+.|.+||+.+
T Consensus 285 ~~l~gh~stv~~~~~~~--~~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~~--~~~lvsgs~d~~v~VW~~~~ 360 (537)
T KOG0274|consen 285 HSLQGHTSSVRCLTIDP--FLLVSGSRDNTVKVWDVTNGACLNLLRGHTGPVNCVQLD--EPLLVSGSYDGTVKVWDPRT 360 (537)
T ss_pred EEecCCCceEEEEEccC--ceEeeccCCceEEEEeccCcceEEEeccccccEEEEEec--CCEEEEEecCceEEEEEhhh
Confidence 99999999998876654 578889999999999999999999999999999999987 78999999999999999999
Q ss_pred ceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCc-ceEEEEccCCc
Q psy4393 185 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVV-TPAIICSTPLN 239 (247)
Q Consensus 185 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~-~~~~~~~~~~~ 239 (247)
+++++.+.. |...|.++.+.+. ..++.|+.|+.|++||.+++ +++-++..+.+
T Consensus 361 ~~cl~sl~g-H~~~V~sl~~~~~-~~~~Sgs~D~~IkvWdl~~~~~c~~tl~~h~~ 414 (537)
T KOG0274|consen 361 GKCLKSLSG-HTGRVYSLIVDSE-NRLLSGSLDTTIKVWDLRTKRKCIHTLQGHTS 414 (537)
T ss_pred ceeeeeecC-CcceEEEEEecCc-ceEEeeeeccceEeecCCchhhhhhhhcCCcc
Confidence 999988765 6778998887765 89999999999999999999 88888777766
No 91
>KOG1407|consensus
Probab=99.94 E-value=1.1e-24 Score=157.97 Aligned_cols=195 Identities=26% Similarity=0.494 Sum_probs=162.3
Q ss_pred EEEEecCCCCeEEEEECC-CCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEEC
Q psy4393 20 KFTLAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWEL 98 (247)
Q Consensus 20 ~~~~~~h~~~v~~~~~s~-~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~ 98 (247)
.....+|++.|-.++|+| ....+++++.|..|++||...+++...+......+ -+.|+|+|+++++++.|..|...|.
T Consensus 57 ~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd~r~~k~~~~i~~~~eni-~i~wsp~g~~~~~~~kdD~it~id~ 135 (313)
T KOG1407|consen 57 ELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWDIRSGKCTARIETKGENI-NITWSPDGEYIAVGNKDDRITFIDA 135 (313)
T ss_pred hhcccCCCcchhhheeCCCCCcceEEecCCceEEEEEeccCcEEEEeeccCcce-EEEEcCCCCEEEEecCcccEEEEEe
Confidence 344568999999999998 45688999999999999999988887776544444 4679999999999988887777665
Q ss_pred CCc-----------------------------------------eEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEE
Q psy4393 99 SSG-----------------------------------------KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 137 (247)
Q Consensus 99 ~~~-----------------------------------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v 137 (247)
++. +++..+++|.....|+.|+|+|+++|+|+.|..+.+
T Consensus 136 r~~~~~~~~~~~~e~ne~~w~~~nd~Fflt~GlG~v~ILsypsLkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSL 215 (313)
T KOG1407|consen 136 RTYKIVNEEQFKFEVNEISWNNSNDLFFLTNGLGCVEILSYPSLKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSL 215 (313)
T ss_pred cccceeehhcccceeeeeeecCCCCEEEEecCCceEEEEeccccccccccccCCcceEEEEECCCCceEeeccccceeec
Confidence 432 223345567777889999999999999999999999
Q ss_pred EECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcC
Q psy4393 138 WDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD 217 (247)
Q Consensus 138 ~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d 217 (247)
||+..--+.+.+..++-||+.+.|+.||++||++++|-.|-|-++.+|..+..+ +..++...++|+|...+||.+..|
T Consensus 216 WD~~ELiC~R~isRldwpVRTlSFS~dg~~lASaSEDh~IDIA~vetGd~~~eI--~~~~~t~tVAWHPk~~LLAyA~dd 293 (313)
T KOG1407|consen 216 WDVDELICERCISRLDWPVRTLSFSHDGRMLASASEDHFIDIAEVETGDRVWEI--PCEGPTFTVAWHPKRPLLAYACDD 293 (313)
T ss_pred cChhHhhhheeeccccCceEEEEeccCcceeeccCccceEEeEecccCCeEEEe--eccCCceeEEecCCCceeeEEecC
Confidence 999888888889889999999999999999999999999999999999766554 455677889999999999987754
No 92
>KOG0275|consensus
Probab=99.94 E-value=7e-27 Score=174.40 Aligned_cols=198 Identities=31% Similarity=0.497 Sum_probs=172.7
Q ss_pred CCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEe-cccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceEE
Q psy4393 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS-GHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCL 104 (247)
Q Consensus 26 h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~ 104 (247)
|..+|.|+.|+.|.+.||+|+.||.|++|.+.++.+...+. .|..+|+++.|+.|+..+++++.|.++++.-++.|+++
T Consensus 262 md~aVlci~FSRDsEMlAsGsqDGkIKvWri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~L 341 (508)
T KOG0275|consen 262 MDDAVLCISFSRDSEMLASGSQDGKIKVWRIETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCL 341 (508)
T ss_pred cccceEEEeecccHHHhhccCcCCcEEEEEEecchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccchhH
Confidence 57889999999999999999999999999999999988886 78889999999999999999999999999999999999
Q ss_pred EEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCC--------------------------------
Q psy4393 105 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAH-------------------------------- 152 (247)
Q Consensus 105 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~-------------------------------- 152 (247)
+.+++|.+.|....|.++|+.+++++.||++++|+..+.+++..++..
T Consensus 342 KEfrGHsSyvn~a~ft~dG~~iisaSsDgtvkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn 421 (508)
T KOG0275|consen 342 KEFRGHSSYVNEATFTDDGHHIISASSDGTVKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMN 421 (508)
T ss_pred HHhcCccccccceEEcCCCCeEEEecCCccEEEecCcchhhhhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEe
Confidence 999999999999999999999999999999999998876543332210
Q ss_pred ---------------CCCeEEEEECCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcC
Q psy4393 153 ---------------SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD 217 (247)
Q Consensus 153 ---------------~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d 217 (247)
.+..-+.+.+|.|.++++.++|+.++-|...+|+....+..++ ..+..++-+|..+.|++-+.|
T Consensus 422 ~qGQvVrsfsSGkREgGdFi~~~lSpkGewiYcigED~vlYCF~~~sG~LE~tl~VhE-kdvIGl~HHPHqNllAsYsED 500 (508)
T KOG0275|consen 422 MQGQVVRSFSSGKREGGDFINAILSPKGEWIYCIGEDGVLYCFSVLSGKLERTLPVHE-KDVIGLTHHPHQNLLASYSED 500 (508)
T ss_pred ccceEEeeeccCCccCCceEEEEecCCCcEEEEEccCcEEEEEEeecCceeeeeeccc-ccccccccCcccchhhhhccc
Confidence 1123345678999999999999999999999988776665444 445678889999999999999
Q ss_pred CeEEEEE
Q psy4393 218 NTLKLWD 224 (247)
Q Consensus 218 g~i~vwd 224 (247)
|.+++|.
T Consensus 501 gllKLWk 507 (508)
T KOG0275|consen 501 GLLKLWK 507 (508)
T ss_pred chhhhcC
Confidence 9999994
No 93
>KOG0268|consensus
Probab=99.94 E-value=3.7e-26 Score=172.31 Aligned_cols=211 Identities=27% Similarity=0.416 Sum_probs=168.2
Q ss_pred EEEecCCCCeEEEEECCCC-CEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECC
Q psy4393 21 FTLAGHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELS 99 (247)
Q Consensus 21 ~~~~~h~~~v~~~~~s~~~-~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~ 99 (247)
..+.+|..+|.+++=+|.. ..+++|+.||.|++||+...++...+..|.+.|..|++.. ..++++++|.+|+.|-+.
T Consensus 60 ~~L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~--~~~~tvgdDKtvK~wk~~ 137 (433)
T KOG0268|consen 60 GSLDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRECIRTFKAHEGLVRGICVTQ--TSFFTVGDDKTVKQWKID 137 (433)
T ss_pred hhccccccccchhhcCcchhhhhhccccCceEEEEehhhhhhhheeecccCceeeEEecc--cceEEecCCcceeeeecc
Confidence 3567999999999999976 6789999999999999999999999999999999999876 567788888887777632
Q ss_pred --------------------------------------CceEEEEEecCCccEEEEEEcCCC-CEEEEeeCCCCEEEEEC
Q psy4393 100 --------------------------------------SGKCLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDV 140 (247)
Q Consensus 100 --------------------------------------~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~v~d~ 140 (247)
...++..+....+.+.++.|+|.. .+|++++.|+.|.+||+
T Consensus 138 ~~p~~tilg~s~~~gIdh~~~~~~FaTcGe~i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas~~sDrsIvLyD~ 217 (433)
T KOG0268|consen 138 GPPLHTILGKSVYLGIDHHRKNSVFATCGEQIDIWDEQRDNPVSSMSWGADSISSVKFNPVETSILASCASDRSIVLYDL 217 (433)
T ss_pred CCcceeeeccccccccccccccccccccCceeeecccccCCccceeecCCCceeEEecCCCcchheeeeccCCceEEEec
Confidence 112233344445567788888855 45677779999999999
Q ss_pred CCCeEEEe------------------------------------------ecCCCCCeEEEEECCCCCEEEEecCCCeEE
Q psy4393 141 RTGKCLKT------------------------------------------LPAHSDPVSAVHFNRDGSLIVSSSYDGLCR 178 (247)
Q Consensus 141 ~~~~~~~~------------------------------------------~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~ 178 (247)
+.+.+++. ...|.+.|.+++|+|.|+-+++|+.|.+|+
T Consensus 218 R~~~Pl~KVi~~mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdfsptG~EfvsgsyDksIR 297 (433)
T KOG0268|consen 218 RQASPLKKVILTMRTNTICWNPEAFNFVAANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDFSPTGQEFVSGSYDKSIR 297 (433)
T ss_pred ccCCccceeeeeccccceecCccccceeeccccccceehhhhhhcccchhhcccceeEEEeccCCCcchhccccccceEE
Confidence 87655422 234555788999999999999999999999
Q ss_pred EEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcceEEE
Q psy4393 179 IWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAII 233 (247)
Q Consensus 179 v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~ 233 (247)
||....+.....+.......|.++.||.|.+++++|+.|+.|++|-.+....+.+
T Consensus 298 If~~~~~~SRdiYhtkRMq~V~~Vk~S~Dskyi~SGSdd~nvRlWka~Aseklgv 352 (433)
T KOG0268|consen 298 IFPVNHGHSRDIYHTKRMQHVFCVKYSMDSKYIISGSDDGNVRLWKAKASEKLGV 352 (433)
T ss_pred EeecCCCcchhhhhHhhhheeeEEEEeccccEEEecCCCcceeeeecchhhhcCC
Confidence 9999877655444444556789999999999999999999999999876654433
No 94
>KOG1273|consensus
Probab=99.94 E-value=6.3e-25 Score=163.12 Aligned_cols=208 Identities=22% Similarity=0.410 Sum_probs=168.8
Q ss_pred eEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceEEEEEec
Q psy4393 30 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKG 109 (247)
Q Consensus 30 v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~ 109 (247)
-.|+.|++.|.+||.|+.||.|.|||..+......+.+|..+|.+++|+++|+.|++++.|..|.+||+..|.+++.++-
T Consensus 26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~rirf 105 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRIRF 105 (405)
T ss_pred cceEEeccCcceeeeeccCCcEEEEEccccchhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEEEc
Confidence 78999999999999999999999999999888888999999999999999999999999999999999998876655431
Q ss_pred CCccEE-----------------------------------------------EEEEcCCCCEEEEeeCCCCEEEEECCC
Q psy4393 110 HSNYVF-----------------------------------------------CCNFNPQSNLIVSGSFDESVRIWDVRT 142 (247)
Q Consensus 110 ~~~~v~-----------------------------------------------~~~~~~~~~~l~~~~~d~~i~v~d~~~ 142 (247)
.++|+ +..|++.|+++++|...|.+.++|..+
T Consensus 106 -~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkllv~~a~t 184 (405)
T KOG1273|consen 106 -DSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHSVLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKLLVYDAET 184 (405)
T ss_pred -cCccceeeeccccCCeEEEEEecCCcEEEEecCCceeeccCCCccccccccccccccCCCCEEEEecCcceEEEEecch
Confidence 11111 112555688999999999999999999
Q ss_pred CeEEEeecCCC-CCeEEEEECCCCCEEEEecCCCeEEEEeCCCc-------ee--eeeecc-CCCCCeEEEEECCCCCEE
Q psy4393 143 GKCLKTLPAHS-DPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG-------QC--LKTLID-DDNPPVSFVKFSPNGKYI 211 (247)
Q Consensus 143 ~~~~~~~~~~~-~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~-------~~--~~~~~~-~~~~~v~~~~~s~~~~~l 211 (247)
.+++..++... ..|..+.++..|+.|+.-+.|..|+.|++..- +. .+.+.. -+..+..++.|+.+|.|+
T Consensus 185 ~e~vas~rits~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~di~~~~r~~e~e~~~K~qDvVNk~~Wk~ccfs~dgeYv 264 (405)
T KOG1273|consen 185 LECVASFRITSVQAIKQIIVSRKGRFLIINTSDRVIRTYEISDIDDEGRDGEVEPEHKLQDVVNKLQWKKCCFSGDGEYV 264 (405)
T ss_pred heeeeeeeechheeeeEEEEeccCcEEEEecCCceEEEEehhhhcccCccCCcChhHHHHHHHhhhhhhheeecCCccEE
Confidence 98888776554 67889999999999999999999999987631 11 111111 123456789999999999
Q ss_pred EEEEc-CCeEEEEECCCcceEEEEccCC
Q psy4393 212 LAATL-DNTLKLWDSKVVTPAIICSTPL 238 (247)
Q Consensus 212 ~~~~~-dg~i~vwd~~~~~~~~~~~~~~ 238 (247)
++++. ...++||+...+..+.++.++-
T Consensus 265 ~a~s~~aHaLYIWE~~~GsLVKILhG~k 292 (405)
T KOG1273|consen 265 CAGSARAHALYIWEKSIGSLVKILHGTK 292 (405)
T ss_pred EeccccceeEEEEecCCcceeeeecCCc
Confidence 98875 4589999999998888776543
No 95
>KOG4283|consensus
Probab=99.94 E-value=6.3e-25 Score=161.86 Aligned_cols=204 Identities=25% Similarity=0.493 Sum_probs=166.6
Q ss_pred cCCCCeEEEEECC-CCCEEEEEeCCCeEEEEecCCCe----------EEEEE-----ecccCCeEEEEECC-CCCEEEEE
Q psy4393 25 GHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGK----------FEKTI-----SGHKLGISDVAWSS-DSRLLVSG 87 (247)
Q Consensus 25 ~h~~~v~~~~~s~-~~~~l~~~~~dg~v~iw~~~~~~----------~~~~~-----~~~~~~v~~~~~~~-~~~~l~~~ 87 (247)
.|.+.|.++...+ .|+++++|+.||.+.+||+++.. .+..+ .+|...|.++.|.| |...+.++
T Consensus 41 ~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFtss 120 (397)
T KOG4283|consen 41 PHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFTSS 120 (397)
T ss_pred cCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceeecc
Confidence 5899999999988 68999999999999999986432 11111 24677899999999 66678888
Q ss_pred cCCCeEEEEECCCceEEEEEecCCccEEEEEEcC---CCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCC
Q psy4393 88 SDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNP---QSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRD 164 (247)
Q Consensus 88 ~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~ 164 (247)
+-|.++++||..+.+..-.++- .+.|..-+++| ...++|+|..+-.|++.|+.+|.....+.+|.+.|.++.|+|.
T Consensus 121 SFDhtlKVWDtnTlQ~a~~F~m-e~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~vlaV~Wsp~ 199 (397)
T KOG4283|consen 121 SFDHTLKVWDTNTLQEAVDFKM-EGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDGVLAVEWSPS 199 (397)
T ss_pred cccceEEEeecccceeeEEeec-CceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccccCceEEEEeccC
Confidence 8999999999999887766663 45677777877 3468899999999999999999999999999999999999998
Q ss_pred CC-EEEEecCCCeEEEEeCCCc-eeeeee-------------ccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcc
Q psy4393 165 GS-LIVSSSYDGLCRIWDTASG-QCLKTL-------------IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVT 229 (247)
Q Consensus 165 ~~-~l~~~~~dg~i~v~d~~~~-~~~~~~-------------~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~ 229 (247)
.. .|++|+.||.+++||++.. .+...+ ...+.+.+..++|+.++.++++++.|.++++|+...+.
T Consensus 200 ~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~wn~~~G~ 279 (397)
T KOG4283|consen 200 SEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLASCGTDDRIRVWNMESGR 279 (397)
T ss_pred ceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccchhhhhccCccceEEeecccCc
Confidence 77 4688999999999999864 222211 12244678899999999999999999999999986653
No 96
>KOG0267|consensus
Probab=99.94 E-value=9e-27 Score=189.05 Aligned_cols=196 Identities=30% Similarity=0.552 Sum_probs=179.9
Q ss_pred EEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCc
Q psy4393 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSG 101 (247)
Q Consensus 22 ~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~ 101 (247)
.+.+|..+|-++.|+++..+|++|..+|+|++||++..+....+.+|...+..+.|+|-+.+.+.++.|+.+.+||.+..
T Consensus 65 S~~~hespIeSl~f~~~E~LlaagsasgtiK~wDleeAk~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~ 144 (825)
T KOG0267|consen 65 SLTGHESPIESLTFDTSERLLAAGSASGTIKVWDLEEAKIVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKK 144 (825)
T ss_pred eeeccCCcceeeecCcchhhhcccccCCceeeeehhhhhhhhhhhccccCcceeeeccceEEeccccccccceehhhhcc
Confidence 47799999999999999999999999999999999999988999999999999999999999999999999999999988
Q ss_pred eEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCCCeEEEEe
Q psy4393 102 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181 (247)
Q Consensus 102 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d 181 (247)
.+.+.+++|...+..+.|+|+|.+++.|++|..+++||+..|+.+..|..|.+.+..+.|+|..-+++.|+.|+.+++||
T Consensus 145 Gc~~~~~s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~agk~~~ef~~~e~~v~sle~hp~e~Lla~Gs~d~tv~f~d 224 (825)
T KOG0267|consen 145 GCSHTYKSHTRVVDVLRLSPDGRWVASGGEDNTVKIWDLTAGKLSKEFKSHEGKVQSLEFHPLEVLLAPGSSDRTVRFWD 224 (825)
T ss_pred CceeeecCCcceeEEEeecCCCceeeccCCcceeeeecccccccccccccccccccccccCchhhhhccCCCCceeeeec
Confidence 88899999998999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCC
Q psy4393 182 TASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN 218 (247)
Q Consensus 182 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg 218 (247)
+++-+.+... ......|.+.+|+|+++.+++|.++.
T Consensus 225 letfe~I~s~-~~~~~~v~~~~fn~~~~~~~~G~q~s 260 (825)
T KOG0267|consen 225 LETFEVISSG-KPETDGVRSLAFNPDGKIVLSGEQIS 260 (825)
T ss_pred cceeEEeecc-CCccCCceeeeecCCceeeecCchhh
Confidence 9876655433 23356789999999999988887654
No 97
>KOG1332|consensus
Probab=99.94 E-value=6.2e-25 Score=157.78 Aligned_cols=210 Identities=30% Similarity=0.432 Sum_probs=171.4
Q ss_pred eEEEEEecCCCCeEEEEECC--CCCEEEEEeCCCeEEEEecCCCeEEE--EEecccCCeEEEEECCC--CCEEEEEcCCC
Q psy4393 18 VLKFTLAGHTKAVSSVKFSP--NGEWLASSSADKLIKIWGAYDGKFEK--TISGHKLGISDVAWSSD--SRLLVSGSDDK 91 (247)
Q Consensus 18 ~~~~~~~~h~~~v~~~~~s~--~~~~l~~~~~dg~v~iw~~~~~~~~~--~~~~~~~~v~~~~~~~~--~~~l~~~~~d~ 91 (247)
.+..+|.||.++|..++|.. -|.+||+|+.||.|.||.-.+++..+ ....|...|++++|.|. |-.|++++.||
T Consensus 47 ~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG 126 (299)
T KOG1332|consen 47 KLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDG 126 (299)
T ss_pred eeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEecCCCchhhhhhhhhhcccceeecccccccceEEEEeeCCC
Confidence 56678999999999999976 89999999999999999987775433 35678999999999985 56789999999
Q ss_pred eEEEEECCCc---eEEEEEecCCccEEEEEEcCC---C-----------CEEEEeeCCCCEEEEECCCCeE--EEeecCC
Q psy4393 92 TLKIWELSSG---KCLKTLKGHSNYVFCCNFNPQ---S-----------NLIVSGSFDESVRIWDVRTGKC--LKTLPAH 152 (247)
Q Consensus 92 ~i~v~d~~~~---~~~~~~~~~~~~v~~~~~~~~---~-----------~~l~~~~~d~~i~v~d~~~~~~--~~~~~~~ 152 (247)
.|.+.+.+.. ...+....|.-.+.+++|.|. | ..|++|+.|..|++|+..+++- -..+..|
T Consensus 127 ~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~~l~~H 206 (299)
T KOG1332|consen 127 KVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLERTLEGH 206 (299)
T ss_pred cEEEEEEcCCCCccchhhhhccccccceeeecCcCCCccccccCcccccceeeccCCccceeeeecCCcchhhhhhhhhc
Confidence 9999988764 123345678888999999885 3 4699999999999999887642 2347899
Q ss_pred CCCeEEEEECCCC----CEEEEecCCCeEEEEeCCC--ceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECC
Q psy4393 153 SDPVSAVHFNRDG----SLIVSSSYDGLCRIWDTAS--GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSK 226 (247)
Q Consensus 153 ~~~i~~~~~~~~~----~~l~~~~~dg~i~v~d~~~--~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~ 226 (247)
.+.|+.++|.|.- ..+++++.||.+.||..+. .+...+++......+..+.||+.|..|+.++.|+.|.+|--+
T Consensus 207 ~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~~e~e~wk~tll~~f~~~~w~vSWS~sGn~LaVs~GdNkvtlwke~ 286 (299)
T KOG1332|consen 207 KDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKDEEYEPWKKTLLEEFPDVVWRVSWSLSGNILAVSGGDNKVTLWKEN 286 (299)
T ss_pred chhhhhhhhccccCCCceeeEEecCCCcEEEEEecCccCcccccccccCCcceEEEEEeccccEEEEecCCcEEEEEEeC
Confidence 9999999999964 4799999999999997652 233344454555678899999999999999999999999654
Q ss_pred C
Q psy4393 227 V 227 (247)
Q Consensus 227 ~ 227 (247)
.
T Consensus 287 ~ 287 (299)
T KOG1332|consen 287 V 287 (299)
T ss_pred C
Confidence 4
No 98
>KOG0283|consensus
Probab=99.94 E-value=1.3e-24 Score=179.26 Aligned_cols=204 Identities=24% Similarity=0.411 Sum_probs=165.0
Q ss_pred EEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECC-CCCEEEEEcCCCeEEEEECC
Q psy4393 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS-DSRLLVSGSDDKTLKIWELS 99 (247)
Q Consensus 21 ~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~v~d~~ 99 (247)
..+.||.+.|..+.|+.+ .+|++++.|.+|++|+.....++..+. |..-|+|++|+| |.+++++|+-||.++||++.
T Consensus 363 ~ef~GHt~DILDlSWSKn-~fLLSSSMDKTVRLWh~~~~~CL~~F~-HndfVTcVaFnPvDDryFiSGSLD~KvRiWsI~ 440 (712)
T KOG0283|consen 363 CEFKGHTADILDLSWSKN-NFLLSSSMDKTVRLWHPGRKECLKVFS-HNDFVTCVAFNPVDDRYFISGSLDGKVRLWSIS 440 (712)
T ss_pred hhhhccchhheecccccC-CeeEeccccccEEeecCCCcceeeEEe-cCCeeEEEEecccCCCcEeecccccceEEeecC
Confidence 456799999999999975 467889999999999998888877765 778899999999 78899999999999999998
Q ss_pred CceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeec--------CCCCCeEEEEECCCC-CEEEE
Q psy4393 100 SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLP--------AHSDPVSAVHFNRDG-SLIVS 170 (247)
Q Consensus 100 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~--------~~~~~i~~~~~~~~~-~~l~~ 170 (247)
..+.+. ...-...|.++++.|+|+..+.|+.+|.+++|+....+....+. .....|+.+.+.|.. ..+++
T Consensus 441 d~~Vv~-W~Dl~~lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~rITG~Q~~p~~~~~vLV 519 (712)
T KOG0283|consen 441 DKKVVD-WNDLRDLITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRLHNKKKKQGKRITGLQFFPGDPDEVLV 519 (712)
T ss_pred cCeeEe-ehhhhhhheeEEeccCCceEEEEEeccEEEEEEccCCeEEEeeeEeeccCccccCceeeeeEecCCCCCeEEE
Confidence 776554 33344779999999999999999999999999998766544331 112379999998744 35777
Q ss_pred ecCCCeEEEEeCCCceeeeeeccCCC-CCeEEEEECCCCCEEEEEEcCCeEEEEECCC
Q psy4393 171 SSYDGLCRIWDTASGQCLKTLIDDDN-PPVSFVKFSPNGKYILAATLDNTLKLWDSKV 227 (247)
Q Consensus 171 ~~~dg~i~v~d~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~ 227 (247)
.+.|..|+|||.++...+..+..... ..-....|+.||++|++++.|..|+||+.+.
T Consensus 520 TSnDSrIRI~d~~~~~lv~KfKG~~n~~SQ~~Asfs~Dgk~IVs~seDs~VYiW~~~~ 577 (712)
T KOG0283|consen 520 TSNDSRIRIYDGRDKDLVHKFKGFRNTSSQISASFSSDGKHIVSASEDSWVYIWKNDS 577 (712)
T ss_pred ecCCCceEEEeccchhhhhhhcccccCCcceeeeEccCCCEEEEeecCceEEEEeCCC
Confidence 88899999999987766655543222 2224578999999999999999999999743
No 99
>KOG1274|consensus
Probab=99.94 E-value=5.2e-24 Score=177.13 Aligned_cols=203 Identities=27% Similarity=0.506 Sum_probs=171.9
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCC-----------eEEEE-----------------------------
Q psy4393 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG-----------KFEKT----------------------------- 64 (247)
Q Consensus 25 ~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~-----------~~~~~----------------------------- 64 (247)
.|+.+.+.++|.|+|+.|.+|+.||.|++|+.... .....
T Consensus 11 aht~G~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~e~P~ti~~~g~~v~~ia~~s~~f~~~s~~~tv~~y~fps~~~~~ 90 (933)
T KOG1274|consen 11 AHTGGLTLICYDPDGEFICTCGSDGDIRKWKTNSDEEEPETIDISGELVSSIACYSNHFLTGSEQNTVLRYKFPSGEEDT 90 (933)
T ss_pred hccCceEEEEEcCCCCEEEEecCCCceEEeecCCcccCCchhhccCceeEEEeecccceEEeeccceEEEeeCCCCCccc
Confidence 78999999999999999999999999999974321 11100
Q ss_pred -EecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCC
Q psy4393 65 -ISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 143 (247)
Q Consensus 65 -~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~ 143 (247)
+.....+++.++++.+|++++.|+.|-.|++.++.+....+.+++|..+|.++.++|.++++|+.+.||.|++||+.++
T Consensus 91 iL~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~~~~~ 170 (933)
T KOG1274|consen 91 ILARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQDG 170 (933)
T ss_pred eeeeeeccceEEEEecCCcEEEeecCceeEEEEeccccchheeecccCCceeeeeEcCCCCEEEEEecCceEEEEEcccc
Confidence 1112346788999999999999999999999999999888999999999999999999999999999999999999988
Q ss_pred eEEEeecC-------C-CCCeEEEEECCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCC-CCeEEEEECCCCCEEEEE
Q psy4393 144 KCLKTLPA-------H-SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN-PPVSFVKFSPNGKYILAA 214 (247)
Q Consensus 144 ~~~~~~~~-------~-~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~ 214 (247)
.....+.. . ...+..++|+|++..+++.+.|+.|.+|+..+++....+..... ..+..+.|+|+|+|||++
T Consensus 171 ~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPnG~YiAAs 250 (933)
T KOG1274|consen 171 ILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPNGKYIAAS 250 (933)
T ss_pred hhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEccCCceeheeecccccccceEEEEEcCCCcEEeee
Confidence 76554431 1 34567789999988888889999999999999988877766543 448999999999999999
Q ss_pred EcCCeEEEEECCC
Q psy4393 215 TLDNTLKLWDSKV 227 (247)
Q Consensus 215 ~~dg~i~vwd~~~ 227 (247)
+.||.|.|||.++
T Consensus 251 ~~~g~I~vWnv~t 263 (933)
T KOG1274|consen 251 TLDGQILVWNVDT 263 (933)
T ss_pred ccCCcEEEEeccc
Confidence 9999999999984
No 100
>KOG0973|consensus
Probab=99.94 E-value=2.1e-24 Score=182.21 Aligned_cols=213 Identities=31% Similarity=0.514 Sum_probs=175.2
Q ss_pred EecC-CCCeEEEEECCCCCEEEEEe--CCCeEEEEecCC------------CeEEEEEecccCCeEEEEECCCCCEEEEE
Q psy4393 23 LAGH-TKAVSSVKFSPNGEWLASSS--ADKLIKIWGAYD------------GKFEKTISGHKLGISDVAWSSDSRLLVSG 87 (247)
Q Consensus 23 ~~~h-~~~v~~~~~s~~~~~l~~~~--~dg~v~iw~~~~------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 87 (247)
+-.| ...|.++..+|+|..+++|+ .|+.+++|+... .+.+.....|.+.|+++.|+|||+++|+|
T Consensus 8 wv~H~~~~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsG 87 (942)
T KOG0973|consen 8 WVNHNEKSIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASG 87 (942)
T ss_pred ccccCCeeEEEEEecCCceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeec
Confidence 3344 45689999999999999999 899999998641 23345567789999999999999999999
Q ss_pred cCCCeEEEEECCC------------------ceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEee
Q psy4393 88 SDDKTLKIWELSS------------------GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTL 149 (247)
Q Consensus 88 ~~d~~i~v~d~~~------------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~ 149 (247)
++|+.|.+|.... -+....+.+|...|..++|+|++.++++++.|+.|.+|+.++...++.+
T Consensus 88 SDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF~~~~vl 167 (942)
T KOG0973|consen 88 SDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKTFELLKVL 167 (942)
T ss_pred cCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecccceEEEEccccceeeeee
Confidence 9999999999762 0245678899999999999999999999999999999999999999999
Q ss_pred cCCCCCeEEEEECCCCCEEEEecCCCeEEEEeCCCceeeeee--------------------------------------
Q psy4393 150 PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL-------------------------------------- 191 (247)
Q Consensus 150 ~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~-------------------------------------- 191 (247)
..|.+.|..+.|+|-|++||+-+.|+++++|++.+....+..
T Consensus 168 ~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~ 247 (942)
T KOG0973|consen 168 RGHQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEKSITKPFEESPLTTFFLRLSWSPDGHHLASPNAVNGGKSTI 247 (942)
T ss_pred ecccccccceEECCccCeeeeecCCceEEEEEcccceeeEeeccchhhCCCcceeeecccCCCcCeecchhhccCCccee
Confidence 999999999999999999999999999999996553221111
Q ss_pred -------------ccCCCCCeEEEEECCC-----CC------------EEEEEEcCCeEEEEECCCcceEEEEc
Q psy4393 192 -------------IDDDNPPVSFVKFSPN-----GK------------YILAATLDNTLKLWDSKVVTPAIICS 235 (247)
Q Consensus 192 -------------~~~~~~~v~~~~~s~~-----~~------------~l~~~~~dg~i~vwd~~~~~~~~~~~ 235 (247)
+.+|..++.++.|+|. .+ .+|+|+.|+.|.||......|++++.
T Consensus 248 ~IieR~tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~RPl~vi~ 321 (942)
T KOG0973|consen 248 AIIERGTWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALPRPLFVIH 321 (942)
T ss_pred EEEecCCceeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCCCCchhhhh
Confidence 1234557888888872 11 56778889999999888888877643
No 101
>KOG0278|consensus
Probab=99.93 E-value=1.2e-25 Score=162.15 Aligned_cols=216 Identities=26% Similarity=0.462 Sum_probs=189.3
Q ss_pred EEecCCCCeEEEEECC---CCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEEC
Q psy4393 22 TLAGHTKAVSSVKFSP---NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWEL 98 (247)
Q Consensus 22 ~~~~h~~~v~~~~~s~---~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~ 98 (247)
+..+|+++|..++|+| +|-+|++++.||.--+.+-+++.....+.+|.+.|.+.....+..+.++++.|-+-++||.
T Consensus 9 ~c~ghtrpvvdl~~s~itp~g~flisa~kd~~pmlr~g~tgdwigtfeghkgavw~~~l~~na~~aasaaadftakvw~a 88 (334)
T KOG0278|consen 9 TCHGHTRPVVDLAFSPITPDGYFLISASKDGKPMLRNGDTGDWIGTFEGHKGAVWSATLNKNATRAASAAADFTAKVWDA 88 (334)
T ss_pred EEcCCCcceeEEeccCCCCCceEEEEeccCCCchhccCCCCCcEEeeeccCcceeeeecCchhhhhhhhcccchhhhhhh
Confidence 4459999999999985 7889999999999888888899999999999999999988888888889999999999999
Q ss_pred CCceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCe-EEEeecCCCCCeEEEEECCCCCEEEEecCCCeE
Q psy4393 99 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK-CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 177 (247)
Q Consensus 99 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i 177 (247)
-++..+..+. |.-.|..++|+.+.+.+++|+.+..+++||++..+ +...+..|.+.|..+-|....+.+++.+.|+.|
T Consensus 89 ~tgdelhsf~-hkhivk~~af~~ds~~lltgg~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~iLSSadd~tV 167 (334)
T KOG0278|consen 89 VTGDELHSFE-HKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKCILSSADDKTV 167 (334)
T ss_pred hhhhhhhhhh-hhheeeeEEecccchhhhccchHHHhhhhhccCCCCCchhhcCCCCcceeEEEeccCceEEeeccCCce
Confidence 9999887775 66778999999999999999999999999998654 566788999999999999888889988999999
Q ss_pred EEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcceEEEEccCCccc
Q psy4393 178 RIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTPLNLN 241 (247)
Q Consensus 178 ~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~ 241 (247)
++||.++++..+++... .+|+++.++++|++|.++. .+.|.+||.+.-.++..+..|-+.+
T Consensus 168 RLWD~rTgt~v~sL~~~--s~VtSlEvs~dG~ilTia~-gssV~Fwdaksf~~lKs~k~P~nV~ 228 (334)
T KOG0278|consen 168 RLWDHRTGTEVQSLEFN--SPVTSLEVSQDGRILTIAY-GSSVKFWDAKSFGLLKSYKMPCNVE 228 (334)
T ss_pred EEEEeccCcEEEEEecC--CCCcceeeccCCCEEEEec-CceeEEeccccccceeeccCccccc
Confidence 99999999988887543 5789999999998776654 5799999999988888877766543
No 102
>KOG0299|consensus
Probab=99.93 E-value=2.7e-24 Score=166.62 Aligned_cols=216 Identities=23% Similarity=0.397 Sum_probs=185.4
Q ss_pred EEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEE----E------------E--ecccCCeEEEEECCCCC
Q psy4393 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK----T------------I--SGHKLGISDVAWSSDSR 82 (247)
Q Consensus 21 ~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~----~------------~--~~~~~~v~~~~~~~~~~ 82 (247)
..+..|..+|++++++|+++++++++.+|+|.-|++.+++... . . ..|...+.+++.++||+
T Consensus 136 ~~~~~H~~s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dgk 215 (479)
T KOG0299|consen 136 RVIGKHQLSVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDGK 215 (479)
T ss_pred eeeccccCcceEEEeeccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCCc
Confidence 3456799999999999999999999999999999987665320 0 0 24566788999999999
Q ss_pred EEEEEcCCCeEEEEECCCceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEEC
Q psy4393 83 LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFN 162 (247)
Q Consensus 83 ~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~ 162 (247)
+|++|+.|..|.||+..+.+.++.+++|.+.|.+++|-...+.+++++.|+.+++|++.....+..+-.|...|..+...
T Consensus 216 ylatgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vetlyGHqd~v~~IdaL 295 (479)
T KOG0299|consen 216 YLATGGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYVETLYGHQDGVLGIDAL 295 (479)
T ss_pred EEEecCCCceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhHhHHHHHHhCCccceeeechh
Confidence 99999999999999999999999999999999999999988999999999999999999888888888999999999888
Q ss_pred CCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcceEEEEccCCc
Q psy4393 163 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTPLN 239 (247)
Q Consensus 163 ~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~ 239 (247)
..++.+.+|+.|+++++|++.... +..+..+...+.+++|-.+ .++++|+.+|.|.+|+.-.+.|+.+.+.+.-
T Consensus 296 ~reR~vtVGgrDrT~rlwKi~ees--qlifrg~~~sidcv~~In~-~HfvsGSdnG~IaLWs~~KKkplf~~~~AHg 369 (479)
T KOG0299|consen 296 SRERCVTVGGRDRTVRLWKIPEES--QLIFRGGEGSIDCVAFIND-EHFVSGSDNGSIALWSLLKKKPLFTSRLAHG 369 (479)
T ss_pred cccceEEeccccceeEEEeccccc--eeeeeCCCCCeeeEEEecc-cceeeccCCceEEEeeecccCceeEeecccc
Confidence 888888888899999999995432 3334455667888888654 6799999999999999999999988776554
No 103
>KOG0308|consensus
Probab=99.93 E-value=9.8e-25 Score=175.47 Aligned_cols=205 Identities=28% Similarity=0.492 Sum_probs=181.9
Q ss_pred EecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCC--eEEEEEecccCCeEEEEE-CCCCCEEEEEcCCCeEEEEECC
Q psy4393 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG--KFEKTISGHKLGISDVAW-SSDSRLLVSGSDDKTLKIWELS 99 (247)
Q Consensus 23 ~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~--~~~~~~~~~~~~v~~~~~-~~~~~~l~~~~~d~~i~v~d~~ 99 (247)
+..|..-|..++...+|+.|++++.|-+|++|+.... -+...+..|...|.+++. .++...+++|+-|+.|.+||++
T Consensus 69 me~HsDWVNDiiL~~~~~tlIS~SsDtTVK~W~~~~~~~~c~stir~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin 148 (735)
T KOG0308|consen 69 MEHHSDWVNDIILCGNGKTLISASSDTTVKVWNAHKDNTFCMSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDIN 148 (735)
T ss_pred hhhhHhHHhhHHhhcCCCceEEecCCceEEEeecccCcchhHhhhhcccchheeeeecccCceeEEecCCCccEEEEEcc
Confidence 3457788899999999999999999999999998765 456678889999999999 7788889999999999999999
Q ss_pred CceE--E--------EEEe-cCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEE
Q psy4393 100 SGKC--L--------KTLK-GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLI 168 (247)
Q Consensus 100 ~~~~--~--------~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 168 (247)
++.. + ..+. ++...+++++.++.+..+++|+.++.+++||.++.+.+..+++|..-|.++..++||+.+
T Consensus 149 ~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivsGgtek~lr~wDprt~~kimkLrGHTdNVr~ll~~dDGt~~ 228 (735)
T KOG0308|consen 149 TGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVSGGTEKDLRLWDPRTCKKIMKLRGHTDNVRVLLVNDDGTRL 228 (735)
T ss_pred CcchhhhhhccccccccCCCCCccceeeeecCCcceEEEecCcccceEEeccccccceeeeeccccceEEEEEcCCCCeE
Confidence 7632 1 1222 667789999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCc
Q psy4393 169 VSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVV 228 (247)
Q Consensus 169 ~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~ 228 (247)
++++.||.|++||+...+++.++..+..+ +..+..+|+=.++++|+.||.|..=|+++.
T Consensus 229 ls~sSDgtIrlWdLgqQrCl~T~~vH~e~-VWaL~~~~sf~~vYsG~rd~~i~~Tdl~n~ 287 (735)
T KOG0308|consen 229 LSASSDGTIRLWDLGQQRCLATYIVHKEG-VWALQSSPSFTHVYSGGRDGNIYRTDLRNP 287 (735)
T ss_pred eecCCCceEEeeeccccceeeeEEeccCc-eEEEeeCCCcceEEecCCCCcEEecccCCc
Confidence 99999999999999999999887665554 899999999999999999999999998873
No 104
>KOG0305|consensus
Probab=99.93 E-value=5.1e-24 Score=171.05 Aligned_cols=205 Identities=24% Similarity=0.436 Sum_probs=174.1
Q ss_pred EEec-CCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEE-EecccCCeEEEEECCCCCEEEEEcCCCeEEEEECC
Q psy4393 22 TLAG-HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT-ISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELS 99 (247)
Q Consensus 22 ~~~~-h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~ 99 (247)
++.+ |...|-+++|. +..+.+|+.++.|..+|+...+.... +.+|...|..+.|++|+.++++|+.|+.+.|||..
T Consensus 254 ~~~~~h~~rvg~laW~--~~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~ 331 (484)
T KOG0305|consen 254 TLRGSHASRVGSLAWN--SSVLSSGSRDGKILNHDVRISQHVVSTLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGL 331 (484)
T ss_pred cccCCcCceeEEEecc--CceEEEecCCCcEEEEEEecchhhhhhhhcccceeeeeEECCCCCeeccCCCccceEeccCC
Confidence 3445 89999999998 66788899999999999976554433 77899999999999999999999999999999998
Q ss_pred CceEEEEEecCCccEEEEEEcC-CCCEEEEee--CCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEE--ecCC
Q psy4393 100 SGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGS--FDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVS--SSYD 174 (247)
Q Consensus 100 ~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~--~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~--~~~d 174 (247)
.......+..|...|.+++|+| ...+||+|+ .|+.|++||..++..+..+.. ...|..+.|++..+-|++ |..+
T Consensus 332 ~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~vdt-gsQVcsL~Wsk~~kEi~sthG~s~ 410 (484)
T KOG0305|consen 332 SPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSVDT-GSQVCSLIWSKKYKELLSTHGYSE 410 (484)
T ss_pred CccccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEeccccc-CCceeeEEEcCCCCEEEEecCCCC
Confidence 7788888999999999999999 567888864 689999999999998887765 467999999998865655 3456
Q ss_pred CeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcce
Q psy4393 175 GLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTP 230 (247)
Q Consensus 175 g~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~ 230 (247)
+.|.||+..+.+....+ ..|...|..++++|||..+++|+.|.++++|+.-...+
T Consensus 411 n~i~lw~~ps~~~~~~l-~gH~~RVl~la~SPdg~~i~t~a~DETlrfw~~f~~~~ 465 (484)
T KOG0305|consen 411 NQITLWKYPSMKLVAEL-LGHTSRVLYLALSPDGETIVTGAADETLRFWNLFDERP 465 (484)
T ss_pred CcEEEEeccccceeeee-cCCcceeEEEEECCCCCEEEEecccCcEEeccccCCCC
Confidence 79999999886655554 45667799999999999999999999999999877533
No 105
>KOG0288|consensus
Probab=99.93 E-value=1.1e-24 Score=166.79 Aligned_cols=204 Identities=26% Similarity=0.432 Sum_probs=172.2
Q ss_pred ceEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEE
Q psy4393 17 YVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIW 96 (247)
Q Consensus 17 ~~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~ 96 (247)
+.+..++.+|+..|+++.|......+++|+.|.+++.||+....+...+.. ...+.++... ...++++..|+.|++|
T Consensus 251 ~r~~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~~C~kt~l~-~S~cnDI~~~--~~~~~SgH~DkkvRfw 327 (459)
T KOG0288|consen 251 LRLRHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQKAYCSKTVLP-GSQCNDIVCS--ISDVISGHFDKKVRFW 327 (459)
T ss_pred hhhhhhhcccccceeeehhhccccceeeccccchhhhhhhhhhheeccccc-cccccceEec--ceeeeecccccceEEE
Confidence 456678889999999999988777799999999999999988776665542 3345666655 4567889999999999
Q ss_pred ECCCceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCC----CCeEEEEECCCCCEEEEec
Q psy4393 97 ELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHS----DPVSAVHFNRDGSLIVSSS 172 (247)
Q Consensus 97 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~----~~i~~~~~~~~~~~l~~~~ 172 (247)
|.+.......+..+. .|.++..++++..+.+.+.|..+.+.|+++.+....+.+.. ...+.+.|+|++.++++|+
T Consensus 328 D~Rs~~~~~sv~~gg-~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS 406 (459)
T KOG0288|consen 328 DIRSADKTRSVPLGG-RVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSYVAAGS 406 (459)
T ss_pred eccCCceeeEeecCc-ceeeEeeccCCeEEeeecCCCceeeeecccccEEEEeeccccccccccceeEECCCCceeeecc
Confidence 999988887777654 79999999999999999999999999999988776665432 2477899999999999999
Q ss_pred CCCeEEEEeCCCceeeeeeccCCC-CCeEEEEECCCCCEEEEEEcCCeEEEEE
Q psy4393 173 YDGLCRIWDTASGQCLKTLIDDDN-PPVSFVKFSPNGKYILAATLDNTLKLWD 224 (247)
Q Consensus 173 ~dg~i~v~d~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~dg~i~vwd 224 (247)
.||.|+||++.++++...+..... +.|++++|+|.|..|++++.++.+.+|.
T Consensus 407 ~dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG~~Llsadk~~~v~lW~ 459 (459)
T KOG0288|consen 407 ADGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSGSGLLSADKQKAVTLWT 459 (459)
T ss_pred CCCcEEEEEccCceEEEEeccCCCCcceEEEEEcCCCchhhcccCCcceEecC
Confidence 999999999999998877765443 3799999999999999999999999993
No 106
>KOG0267|consensus
Probab=99.93 E-value=7.2e-26 Score=183.87 Aligned_cols=206 Identities=26% Similarity=0.541 Sum_probs=186.2
Q ss_pred ecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceE
Q psy4393 24 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKC 103 (247)
Q Consensus 24 ~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~ 103 (247)
..|...|.++..-..++.+++|+.|..+-+|.+........+.+|..+|.++.|+++..+|++|+.+|+|++||++..+.
T Consensus 25 ~~hsaav~~lk~~~s~r~~~~Gg~~~k~~L~~i~kp~~i~S~~~hespIeSl~f~~~E~LlaagsasgtiK~wDleeAk~ 104 (825)
T KOG0267|consen 25 VAHSAAVGCLKIRKSSRSLVTGGEDEKVNLWAIGKPNAITSLTGHESPIESLTFDTSERLLAAGSASGTIKVWDLEEAKI 104 (825)
T ss_pred hhhhhhhceeeeeccceeeccCCCceeeccccccCCchhheeeccCCcceeeecCcchhhhcccccCCceeeeehhhhhh
Confidence 46888888888877888999999999999999877666667899999999999999999999999999999999999999
Q ss_pred EEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCCCeEEEEeCC
Q psy4393 104 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA 183 (247)
Q Consensus 104 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~ 183 (247)
++.+.+|...+..+.|+|.+.+.+.|+.|..+++||.+...+...+..|...+.++.|+|+|++++.++.|..+++||+.
T Consensus 105 vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~ 184 (825)
T KOG0267|consen 105 VRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKGCSHTYKSHTRVVDVLRLSPDGRWVASGGEDNTVKIWDLT 184 (825)
T ss_pred hhhhhccccCcceeeeccceEEeccccccccceehhhhccCceeeecCCcceeEEEeecCCCceeeccCCcceeeeeccc
Confidence 99999999999999999999999999999999999999777888888899999999999999999999999999999999
Q ss_pred CceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcce
Q psy4393 184 SGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTP 230 (247)
Q Consensus 184 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~ 230 (247)
.++....+. .+...+..+.|+|..-+++.|+.|+++++||+++-..
T Consensus 185 agk~~~ef~-~~e~~v~sle~hp~e~Lla~Gs~d~tv~f~dletfe~ 230 (825)
T KOG0267|consen 185 AGKLSKEFK-SHEGKVQSLEFHPLEVLLAPGSSDRTVRFWDLETFEV 230 (825)
T ss_pred ccccccccc-cccccccccccCchhhhhccCCCCceeeeeccceeEE
Confidence 998777654 3456788899999999999999999999999985443
No 107
>KOG0772|consensus
Probab=99.93 E-value=2.2e-24 Score=169.48 Aligned_cols=200 Identities=22% Similarity=0.408 Sum_probs=157.7
Q ss_pred ecCCCCeEEEEECCCCC-EEEEEeCCCeEEEEecCCCeEEEEEe------cccCCeEEEEECCCCCEEEEEcCCCeEEEE
Q psy4393 24 AGHTKAVSSVKFSPNGE-WLASSSADKLIKIWGAYDGKFEKTIS------GHKLGISDVAWSSDSRLLVSGSDDKTLKIW 96 (247)
Q Consensus 24 ~~h~~~v~~~~~s~~~~-~l~~~~~dg~v~iw~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~ 96 (247)
+||...++|.+|+|..+ .+++++.||++++|++.+.+....+. +...+++.++|++||..||+|+.||.|.+|
T Consensus 265 KGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W 344 (641)
T KOG0772|consen 265 KGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIW 344 (641)
T ss_pred CCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCcccCceeeecCCCcchhhhcccCCceeee
Confidence 58999999999999654 68899999999999997655433322 234568999999999999999999999999
Q ss_pred ECCCce---EEEEEecCCc--cEEEEEEcCCCCEEEEeeCCCCEEEEECCCCe-EEEeecC--CCCCeEEEEECCCCCEE
Q psy4393 97 ELSSGK---CLKTLKGHSN--YVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK-CLKTLPA--HSDPVSAVHFNRDGSLI 168 (247)
Q Consensus 97 d~~~~~---~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~-~~~~~~~--~~~~i~~~~~~~~~~~l 168 (247)
+..... ..+.-++|.. .|.++.|+++|++|++-+.|+.+++||++..+ ++..... ...+-+..+|+|+.+++
T Consensus 345 ~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~kkpL~~~tgL~t~~~~tdc~FSPd~kli 424 (641)
T KOG0772|consen 345 DKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQFKKPLNVRTGLPTPFPGTDCCFSPDDKLI 424 (641)
T ss_pred ecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeeccccccchhhhcCCCccCCCCccccCCCceEE
Confidence 974321 1222345655 79999999999999999999999999999754 3333221 12345667999999999
Q ss_pred EEecC------CCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEE
Q psy4393 169 VSSSY------DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224 (247)
Q Consensus 169 ~~~~~------dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd 224 (247)
++|+. .|.+.+||..+.+.+..+... ...|..+.|+|.=+.|.+|+.||.++||=
T Consensus 425 ~TGtS~~~~~~~g~L~f~d~~t~d~v~ki~i~-~aSvv~~~WhpkLNQi~~gsgdG~~~vyY 485 (641)
T KOG0772|consen 425 LTGTSAPNGMTAGTLFFFDRMTLDTVYKIDIS-TASVVRCLWHPKLNQIFAGSGDGTAHVYY 485 (641)
T ss_pred EecccccCCCCCceEEEEeccceeeEEEecCC-CceEEEEeecchhhheeeecCCCceEEEE
Confidence 99863 467999999888877766544 45677889999988999999999999873
No 108
>KOG0301|consensus
Probab=99.92 E-value=8.3e-24 Score=171.22 Aligned_cols=195 Identities=30% Similarity=0.512 Sum_probs=167.1
Q ss_pred EEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECC
Q psy4393 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELS 99 (247)
Q Consensus 20 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~ 99 (247)
-+++.+|...|.++....++. +++|+.|.++++|.. +++...+.+|...|.++..-|++ .++||+.|.+|++|.-
T Consensus 94 ~~~LkgH~snVC~ls~~~~~~-~iSgSWD~TakvW~~--~~l~~~l~gH~asVWAv~~l~e~-~~vTgsaDKtIklWk~- 168 (745)
T KOG0301|consen 94 LYTLKGHKSNVCSLSIGEDGT-LISGSWDSTAKVWRI--GELVYSLQGHTASVWAVASLPEN-TYVTGSADKTIKLWKG- 168 (745)
T ss_pred hhhhhccccceeeeecCCcCc-eEecccccceEEecc--hhhhcccCCcchheeeeeecCCC-cEEeccCcceeeeccC-
Confidence 467789999999999888888 899999999999975 44555689999999999999987 7899999999999986
Q ss_pred CceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCCCeEEE
Q psy4393 100 SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 179 (247)
Q Consensus 100 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v 179 (247)
++.++++.+|.+.|+.+++-+++ .+++++.||.|++|++ +++.+.+..+|...+.++....++..++++++|+++++
T Consensus 169 -~~~l~tf~gHtD~VRgL~vl~~~-~flScsNDg~Ir~w~~-~ge~l~~~~ghtn~vYsis~~~~~~~Ivs~gEDrtlri 245 (745)
T KOG0301|consen 169 -GTLLKTFSGHTDCVRGLAVLDDS-HFLSCSNDGSIRLWDL-DGEVLLEMHGHTNFVYSISMALSDGLIVSTGEDRTLRI 245 (745)
T ss_pred -CchhhhhccchhheeeeEEecCC-CeEeecCCceEEEEec-cCceeeeeeccceEEEEEEecCCCCeEEEecCCceEEE
Confidence 67788999999999999998864 5788999999999999 78889999999999999998888899999999999999
Q ss_pred EeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECC
Q psy4393 180 WDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSK 226 (247)
Q Consensus 180 ~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~ 226 (247)
|+.. ++.+.+.. ....+.++.+-++|. +++|++||.||||..+
T Consensus 246 W~~~--e~~q~I~l-PttsiWsa~~L~NgD-Ivvg~SDG~VrVfT~~ 288 (745)
T KOG0301|consen 246 WKKD--ECVQVITL-PTTSIWSAKVLLNGD-IVVGGSDGRVRVFTVD 288 (745)
T ss_pred eecC--ceEEEEec-CccceEEEEEeeCCC-EEEeccCceEEEEEec
Confidence 9876 44444433 334677777777776 7788889999999754
No 109
>KOG1036|consensus
Probab=99.92 E-value=3.8e-23 Score=153.04 Aligned_cols=203 Identities=21% Similarity=0.341 Sum_probs=154.3
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceEEEE
Q psy4393 27 TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKT 106 (247)
Q Consensus 27 ~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~ 106 (247)
...|+++.|+|.++.|++++.||.+++|+.........+ .|..++.+++|.+ ...+++|+-||.|+++|+.++... .
T Consensus 13 ~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~~l~~~~-~~~~plL~c~F~d-~~~~~~G~~dg~vr~~Dln~~~~~-~ 89 (323)
T KOG1036|consen 13 EDGISSVKFSPSSSDLLVSSWDGSLRLYDVPANSLKLKF-KHGAPLLDCAFAD-ESTIVTGGLDGQVRRYDLNTGNED-Q 89 (323)
T ss_pred hhceeeEEEcCcCCcEEEEeccCcEEEEeccchhhhhhe-ecCCceeeeeccC-CceEEEeccCceEEEEEecCCcce-e
Confidence 568999999999999988999999999998766444444 4788999999987 457899999999999999988754 4
Q ss_pred EecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCCCeEEEEeCCCce
Q psy4393 107 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 186 (247)
Q Consensus 107 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~ 186 (247)
+..|...+.|+...+....+++|++|+.|++||.+.......+.. ...|.++.. .+..|++|+.+..+.+||+++..
T Consensus 90 igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~~~d~-~kkVy~~~v--~g~~LvVg~~~r~v~iyDLRn~~ 166 (323)
T KOG1036|consen 90 IGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVVGTFDQ-GKKVYCMDV--SGNRLVVGTSDRKVLIYDLRNLD 166 (323)
T ss_pred eccCCCceEEEEeeccCCeEEEcccCccEEEEecccccccccccc-CceEEEEec--cCCEEEEeecCceEEEEEccccc
Confidence 667899999999999999999999999999999996443333332 235655554 34566667777777777776531
Q ss_pred eee------------------------------------------------ee----ccC----CCCCeEEEEECCCCCE
Q psy4393 187 CLK------------------------------------------------TL----IDD----DNPPVSFVKFSPNGKY 210 (247)
Q Consensus 187 ~~~------------------------------------------------~~----~~~----~~~~v~~~~~s~~~~~ 210 (247)
... .+ ... ...||+.++|+|-.+.
T Consensus 167 ~~~q~reS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~Fhp~~~t 246 (323)
T KOG1036|consen 167 EPFQRRESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIAFHPIHGT 246 (323)
T ss_pred chhhhccccceeEEEEEEEecCCCceEEEeecceEEEEccCCchHHhhhceeEEeeecccCCceEEEEeceeEeccccce
Confidence 100 00 000 0136889999999999
Q ss_pred EEEEEcCCeEEEEECCCcceEEEEc
Q psy4393 211 ILAATLDNTLKLWDSKVVTPAIICS 235 (247)
Q Consensus 211 l~~~~~dg~i~vwd~~~~~~~~~~~ 235 (247)
|++|+.||.|.+||....+-+..+.
T Consensus 247 faTgGsDG~V~~Wd~~~rKrl~q~~ 271 (323)
T KOG1036|consen 247 FATGGSDGIVNIWDLFNRKRLKQLA 271 (323)
T ss_pred EEecCCCceEEEccCcchhhhhhcc
Confidence 9999999999999998876554433
No 110
>KOG0269|consensus
Probab=99.92 E-value=2.4e-24 Score=176.21 Aligned_cols=207 Identities=22% Similarity=0.378 Sum_probs=169.8
Q ss_pred EEecCCCCeEEEEECCCC-CEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECC-CCCEEEEEcCCCeEEEEECC
Q psy4393 22 TLAGHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS-DSRLLVSGSDDKTLKIWELS 99 (247)
Q Consensus 22 ~~~~h~~~v~~~~~s~~~-~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~v~d~~ 99 (247)
.+..|.+.+.++.|++.. .+|++|+.||.|+.||+........+.+....|.++.|+| .+..++++.+.|.+.+||++
T Consensus 128 ~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlR 207 (839)
T KOG0269|consen 128 VFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLR 207 (839)
T ss_pred HhhhhccceeeeeeccCCccEEEecCCCceEEEEeeecccccccccccchhhhceeeccCCCceEEEecCCceEEEeecc
Confidence 456899999999999854 5788999999999999998888888888888899999999 57889999999999999998
Q ss_pred Cc-eEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCC-CCCeEEEEECCCCC-EEEEecC--C
Q psy4393 100 SG-KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAH-SDPVSAVHFNRDGS-LIVSSSY--D 174 (247)
Q Consensus 100 ~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~-~~~i~~~~~~~~~~-~l~~~~~--d 174 (247)
.. ++...+.+|.++|.|+.|+|++.+||||+.|+.++|||..+++.......+ ..++.+++|-|... +|++++. |
T Consensus 208 qp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~~~~~~tInTiapv~rVkWRP~~~~hLAtcsmv~d 287 (839)
T KOG0269|consen 208 QPDRCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTDSRAKPKHTINTIAPVGRVKWRPARSYHLATCSMVVD 287 (839)
T ss_pred CchhHHHHhhcccCceEEEeecCCCceeeecCCCccEEEEeccCCCccceeEEeecceeeeeeeccCccchhhhhhcccc
Confidence 64 456678899999999999999999999999999999999866532222222 35889999999766 5666653 6
Q ss_pred CeEEEEeCCCceeeeeeccCCCCCeEEEEECC-CCCEEEEEEcCCeEEEEECCCc
Q psy4393 175 GLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP-NGKYILAATLDNTLKLWDSKVV 228 (247)
Q Consensus 175 g~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~vwd~~~~ 228 (247)
-.|+|||++..-.....+..|...++.++|.. |-..|.+++.||.|..--.++.
T Consensus 288 tsV~VWDvrRPYIP~~t~~eH~~~vt~i~W~~~d~~~l~s~sKD~tv~qh~~kna 342 (839)
T KOG0269|consen 288 TSVHVWDVRRPYIPYATFLEHTDSVTGIAWDSGDRINLWSCSKDGTVLQHLFKNA 342 (839)
T ss_pred ceEEEEeeccccccceeeeccCccccceeccCCCceeeEeecCccHHHHhhhhcc
Confidence 68999999987766666677778889999976 4567788999998776554443
No 111
>KOG0302|consensus
Probab=99.92 E-value=2.2e-23 Score=158.16 Aligned_cols=208 Identities=28% Similarity=0.475 Sum_probs=162.2
Q ss_pred eEEEEEecCCCCeEEEEECCCCC--EEEEEeCCCeEEEEecCC----------------CeEEEEEecccCCeEEEEECC
Q psy4393 18 VLKFTLAGHTKAVSSVKFSPNGE--WLASSSADKLIKIWGAYD----------------GKFEKTISGHKLGISDVAWSS 79 (247)
Q Consensus 18 ~~~~~~~~h~~~v~~~~~s~~~~--~l~~~~~dg~v~iw~~~~----------------~~~~~~~~~~~~~v~~~~~~~ 79 (247)
.+......|.+.+..+.-++-++ +.++-+..|.|+||++.. .+.+.++.+|...=..++|+|
T Consensus 142 ~~~~~~i~h~g~~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp 221 (440)
T KOG0302|consen 142 QIEMKSIPHYGGINRVRVSRLGNEVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSP 221 (440)
T ss_pred cccccccccccccceeeecccCCcceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeeccc
Confidence 34444457888999988888765 444556889999999632 123345667777778899999
Q ss_pred C-CCEEEEEcCCCeEEEEECCCceEE---EEEecCCccEEEEEEcCCC-CEEEEeeCCCCEEEEECCCCe---EEEeecC
Q psy4393 80 D-SRLLVSGSDDKTLKIWELSSGKCL---KTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVRTGK---CLKTLPA 151 (247)
Q Consensus 80 ~-~~~l~~~~~d~~i~v~d~~~~~~~---~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~v~d~~~~~---~~~~~~~ 151 (247)
- ...+++|..-+.|++|...++.-. ..+.+|...|..++|+|.. ..|++++.||.|+|||+|.+. ++.. ++
T Consensus 222 ~~~g~LlsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~-kA 300 (440)
T KOG0302|consen 222 IKTGRLLSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVST-KA 300 (440)
T ss_pred ccccccccCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeEe-ec
Confidence 3 234778888889999999886532 2456788899999999954 688999999999999999883 3333 78
Q ss_pred CCCCeEEEEECCCCCEEEEecCCCeEEEEeCCCce---eeeeeccCCCCCeEEEEECCCC-CEEEEEEcCCeEEEEECCC
Q psy4393 152 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ---CLKTLIDDDNPPVSFVKFSPNG-KYILAATLDNTLKLWDSKV 227 (247)
Q Consensus 152 ~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~---~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~vwd~~~ 227 (247)
|.+.|+.+.|+.+-.+||+|+.||.++|||++.-+ ++.. +..|..+|+++.|+|.. ..|++++.|++|.+||+..
T Consensus 301 h~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~-fk~Hk~pItsieW~p~e~s~iaasg~D~QitiWDlsv 379 (440)
T KOG0302|consen 301 HNSDVNVISWNRREPLLASGGDDGTLSIWDLRQFKSGQPVAT-FKYHKAPITSIEWHPHEDSVIAASGEDNQITIWDLSV 379 (440)
T ss_pred cCCceeeEEccCCcceeeecCCCceEEEEEhhhccCCCccee-EEeccCCeeEEEeccccCceEEeccCCCcEEEEEeec
Confidence 99999999999988899999999999999998643 3333 34567899999999975 5677888999999999754
No 112
>KOG0303|consensus
Probab=99.92 E-value=7.9e-23 Score=156.02 Aligned_cols=216 Identities=22% Similarity=0.418 Sum_probs=173.8
Q ss_pred EecCCCCeEEEEECC-CCCEEEEEeCCCeEEEEecCCC-------eEEEEEecccCCeEEEEECCC-CCEEEEEcCCCeE
Q psy4393 23 LAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDG-------KFEKTISGHKLGISDVAWSSD-SRLLVSGSDDKTL 93 (247)
Q Consensus 23 ~~~h~~~v~~~~~s~-~~~~l~~~~~dg~v~iw~~~~~-------~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i 93 (247)
++||+++|..++|+| +...+|+|+.|-+|.||.+..+ +....+.+|...|--+.|+|. .+.|++++.|..|
T Consensus 77 v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v 156 (472)
T KOG0303|consen 77 VCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTV 156 (472)
T ss_pred ccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCceE
Confidence 358999999999999 5567899999999999998643 235567899999999999995 5678899999999
Q ss_pred EEEECCCceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCC-eEEEEECCCCCEEEEec
Q psy4393 94 KIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDP-VSAVHFNRDGSLIVSSS 172 (247)
Q Consensus 94 ~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~-i~~~~~~~~~~~l~~~~ 172 (247)
.+||+.+++.+..+. |.+.|.+++|+.+|+++++.+.|..|++||.+.++.+..-.+|.+. -..+.|-.++.++.+|-
T Consensus 157 ~iWnv~tgeali~l~-hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e~~~heG~k~~Raifl~~g~i~tTGf 235 (472)
T KOG0303|consen 157 SIWNVGTGEALITLD-HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSEGVAHEGAKPARAIFLASGKIFTTGF 235 (472)
T ss_pred EEEeccCCceeeecC-CCCeEEEEEeccCCceeeeecccceeEEEcCCCCcEeeecccccCCCcceeEEeccCceeeecc
Confidence 999999999887877 9999999999999999999999999999999999998887777653 23456778888444442
Q ss_pred ---CCCeEEEEeCCCceeeeeecc-CCCCCeEEEEECCCCCEEEEEE-cCCeEEEEECCCcceEEEEccCCc
Q psy4393 173 ---YDGLCRIWDTASGQCLKTLID-DDNPPVSFVKFSPNGKYILAAT-LDNTLKLWDSKVVTPAIICSTPLN 239 (247)
Q Consensus 173 ---~dg~i~v~d~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~~~ 239 (247)
.+.++-+||..+-+....+.. .....|..--|+||...++.++ .|+.||-|+.....|.+-|...+.
T Consensus 236 sr~seRq~aLwdp~nl~eP~~~~elDtSnGvl~PFyD~dt~ivYl~GKGD~~IRYyEit~d~P~~hyln~f~ 307 (472)
T KOG0303|consen 236 SRMSERQIALWDPNNLEEPIALQELDTSNGVLLPFYDPDTSIVYLCGKGDSSIRYFEITNEPPFVHYLNTFS 307 (472)
T ss_pred ccccccceeccCcccccCcceeEEeccCCceEEeeecCCCCEEEEEecCCcceEEEEecCCCceeEEecccc
Confidence 356899999876543322222 2334566677899999888766 699999999998888877665544
No 113
>KOG0300|consensus
Probab=99.91 E-value=4.1e-23 Score=153.97 Aligned_cols=206 Identities=29% Similarity=0.527 Sum_probs=173.9
Q ss_pred EEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEec------CC------------------------------C----e
Q psy4393 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGA------YD------------------------------G----K 60 (247)
Q Consensus 21 ~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~------~~------------------------------~----~ 60 (247)
.++.||.+.|.+++|++.+.++++++.|++-.||.. .. + .
T Consensus 184 ~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRv 263 (481)
T KOG0300|consen 184 ATYTGHTGSVNSIKFHNSGLLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRV 263 (481)
T ss_pred eeecccccceeeEEeccccceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeee
Confidence 456799999999999999999999999999999951 00 0 0
Q ss_pred EEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEEC
Q psy4393 61 FEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 140 (247)
Q Consensus 61 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~ 140 (247)
.+..+.+|...|.+..|-..|+.+++++.|.+-.+||++++..+..+.+|......++-+|...++++.+.|.+.++||.
T Consensus 264 Pl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtge~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDF 343 (481)
T KOG0300|consen 264 PLMRLTGHRAVVSACDWLAGGQQMVTASWDRTANLWDVETGEVVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDF 343 (481)
T ss_pred eeeeeeccccceEehhhhcCcceeeeeeccccceeeeeccCceeccccCcchhccccccCCcceEEEEeccCceeEeccc
Confidence 12346778888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCC-eEEEeecCCCCCeEEEEECCCCCEEEEecCCCeEEEEeCCCce-eeeeeccCCCCCeEEEEECCCCCEEEEEEcCC
Q psy4393 141 RTG-KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ-CLKTLIDDDNPPVSFVKFSPNGKYILAATLDN 218 (247)
Q Consensus 141 ~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~-~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg 218 (247)
+.. ..+..|++|...|+++.|..+.+ +++|+.|.+|++||+++-. .+.++. -.++++.++.+..++.++.-..+.
T Consensus 344 ReaI~sV~VFQGHtdtVTS~vF~~dd~-vVSgSDDrTvKvWdLrNMRsplATIR--tdS~~NRvavs~g~~iIAiPhDNR 420 (481)
T KOG0300|consen 344 REAIQSVAVFQGHTDTVTSVVFNTDDR-VVSGSDDRTVKVWDLRNMRSPLATIR--TDSPANRVAVSKGHPIIAIPHDNR 420 (481)
T ss_pred hhhcceeeeecccccceeEEEEecCCc-eeecCCCceEEEeeeccccCcceeee--cCCccceeEeecCCceEEeccCCc
Confidence 843 34678899999999999987654 7899999999999998754 233332 235678889998888888888888
Q ss_pred eEEEEECCCcc
Q psy4393 219 TLKLWDSKVVT 229 (247)
Q Consensus 219 ~i~vwd~~~~~ 229 (247)
.|++||++...
T Consensus 421 qvRlfDlnG~R 431 (481)
T KOG0300|consen 421 QVRLFDLNGNR 431 (481)
T ss_pred eEEEEecCCCc
Confidence 99999987653
No 114
>KOG2096|consensus
Probab=99.91 E-value=1e-22 Score=151.73 Aligned_cols=204 Identities=22% Similarity=0.418 Sum_probs=151.8
Q ss_pred EEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeE-----EEEEecccCCeEEEEECCCCCEEE-EEcCCCeEEE
Q psy4393 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF-----EKTISGHKLGISDVAWSSDSRLLV-SGSDDKTLKI 95 (247)
Q Consensus 22 ~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~-----~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~v 95 (247)
.+++|.+.|++++|+.||++|++++.|+.|++|+..+-.. .+. .-.....+.+.|.||-+-++ +......+++
T Consensus 81 ~LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~-nve~dhpT~V~FapDc~s~vv~~~~g~~l~v 159 (420)
T KOG2096|consen 81 VLKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQ-NVEYDHPTRVVFAPDCKSVVVSVKRGNKLCV 159 (420)
T ss_pred hhhccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhc-cccCCCceEEEECCCcceEEEEEccCCEEEE
Confidence 4679999999999999999999999999999999865321 111 11122457789999876554 4445568999
Q ss_pred EECCCc---eEEEE---------EecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECC
Q psy4393 96 WELSSG---KCLKT---------LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNR 163 (247)
Q Consensus 96 ~d~~~~---~~~~~---------~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~ 163 (247)
|.+... ..... -+.|.-.+..+....++.+|++++.|..|.+|+++ |+.+..+......-+..+.+|
T Consensus 160 yk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~L~~idtnq~~n~~aavSP 238 (420)
T KOG2096|consen 160 YKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK-GQLLQSIDTNQSSNYDAAVSP 238 (420)
T ss_pred EEeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecC-CceeeeeccccccccceeeCC
Confidence 876432 11110 11233345556666788899999999999999999 888888776655666778999
Q ss_pred CCCEEEEecCCCeEEEEeCC---Ccee--e-eee-ccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCC
Q psy4393 164 DGSLIVSSSYDGLCRIWDTA---SGQC--L-KTL-IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKV 227 (247)
Q Consensus 164 ~~~~l~~~~~dg~i~v~d~~---~~~~--~-~~~-~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~ 227 (247)
+|+++++++..-.+++|.+- .|+. . +.+ +.++.+.|..++|+++.+.+++.+.||.++|||.+.
T Consensus 239 ~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtdV 309 (420)
T KOG2096|consen 239 DGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTDV 309 (420)
T ss_pred CCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeeccc
Confidence 99999999999999999753 2221 1 111 245678899999999999999999999999999753
No 115
>KOG2055|consensus
Probab=99.91 E-value=4.8e-22 Score=154.40 Aligned_cols=200 Identities=18% Similarity=0.324 Sum_probs=170.3
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCeEEEEecCC--CeEEEEEecccCCeEEEEECCCCC-EEEEEcCCCeEEEEECCCceE
Q psy4393 27 TKAVSSVKFSPNGEWLASSSADKLIKIWGAYD--GKFEKTISGHKLGISDVAWSSDSR-LLVSGSDDKTLKIWELSSGKC 103 (247)
Q Consensus 27 ~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~--~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~~ 103 (247)
.++|+++.|+|....|++|+.|+.+++|.+.. ...++.+.-...+|.+..|.|+|. .+++++....++.||+.+.+.
T Consensus 213 ~~~I~sv~FHp~~plllvaG~d~~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ak~ 292 (514)
T KOG2055|consen 213 HGGITSVQFHPTAPLLLVAGLDGTLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETAKV 292 (514)
T ss_pred cCCceEEEecCCCceEEEecCCCcEEEEEecCccChhheeeeeccCccceeeecCCCceEEEecccceEEEEeecccccc
Confidence 57899999999999999999999999998753 334556666678899999999998 899999999999999988764
Q ss_pred EE--EEecCC-ccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCCCeEEEE
Q psy4393 104 LK--TLKGHS-NYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 180 (247)
Q Consensus 104 ~~--~~~~~~-~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~ 180 (247)
.+ ...+.. ..+.....+|++++++..+..|.|++....+++.+..++. .+.+..++|+.+++.|++++.+|.|.+|
T Consensus 293 ~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~eli~s~Ki-eG~v~~~~fsSdsk~l~~~~~~GeV~v~ 371 (514)
T KOG2055|consen 293 TKLKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKELITSFKI-EGVVSDFTFSSDSKELLASGGTGEVYVW 371 (514)
T ss_pred ccccCCCCcccchhheeEecCCCCeEEEcccCceEEeehhhhhhhhheeee-ccEEeeEEEecCCcEEEEEcCCceEEEE
Confidence 32 222222 2355667899999999999999999999999988888775 5789999999999999999999999999
Q ss_pred eCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCC
Q psy4393 181 DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKV 227 (247)
Q Consensus 181 d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~ 227 (247)
|++...++.++.......-+.++.+++++|||+|+..|.|.|||.++
T Consensus 372 nl~~~~~~~rf~D~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s 418 (514)
T KOG2055|consen 372 NLRQNSCLHRFVDDGSVHGTSLCISLNGSYLATGSDSGIVNIYDGNS 418 (514)
T ss_pred ecCCcceEEEEeecCccceeeeeecCCCceEEeccCcceEEEeccch
Confidence 99999999888776665667889999999999999999999999654
No 116
>KOG1539|consensus
Probab=99.91 E-value=1.4e-22 Score=167.15 Aligned_cols=202 Identities=26% Similarity=0.444 Sum_probs=178.7
Q ss_pred CCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEE---ecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceEE
Q psy4393 28 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI---SGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCL 104 (247)
Q Consensus 28 ~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~ 104 (247)
..+++++.++.|++.+.|...|.|.+|++..|....++ ..|..+|++++...-++.+++++.+|.+.+||.++....
T Consensus 449 ~~~~av~vs~CGNF~~IG~S~G~Id~fNmQSGi~r~sf~~~~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~ 528 (910)
T KOG1539|consen 449 INATAVCVSFCGNFVFIGYSKGTIDRFNMQSGIHRKSFGDSPAHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKVLK 528 (910)
T ss_pred cceEEEEEeccCceEEEeccCCeEEEEEcccCeeecccccCccccCceeEEEecCCCceEEEccCcceEEEEecCCccee
Confidence 67899999999999999999999999999998887777 478899999999988899999999999999999988776
Q ss_pred EEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCCCeEEEEeCCC
Q psy4393 105 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 184 (247)
Q Consensus 105 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~ 184 (247)
..++-. ..+.++..+....+++.+..|-.|+++|..+.+.++.+.+|.+.|++++|+|||++|++++.|+.|++||+.+
T Consensus 529 ~~l~l~-~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt 607 (910)
T KOG1539|consen 529 KSLRLG-SSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREFWGHGNRITDMTFSPDGRWLISASMDSTIRTWDLPT 607 (910)
T ss_pred eeeccC-CCcceeeeeehhhhhhhhcCceeEEEEEchhhhhhHHhhccccceeeeEeCCCCcEEEEeecCCcEEEEeccC
Confidence 666643 4467778888888999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeeeeccCCCCCeEEEEECCCCCEEEEEEcC-CeEEEEECCCcceEE
Q psy4393 185 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD-NTLKLWDSKVVTPAI 232 (247)
Q Consensus 185 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-g~i~vwd~~~~~~~~ 232 (247)
++++-.+... .+...+.|+|+|++||+...| +-|++|--+.....+
T Consensus 608 ~~lID~~~vd--~~~~sls~SPngD~LAT~Hvd~~gIylWsNkslF~~v 654 (910)
T KOG1539|consen 608 GTLIDGLLVD--SPCTSLSFSPNGDFLATVHVDQNGIYLWSNKSLFKSV 654 (910)
T ss_pred cceeeeEecC--CcceeeEECCCCCEEEEEEecCceEEEEEchhHheec
Confidence 9988766443 456889999999999999998 689999876655443
No 117
>KOG1332|consensus
Probab=99.91 E-value=2e-23 Score=150.06 Aligned_cols=203 Identities=24% Similarity=0.370 Sum_probs=168.3
Q ss_pred ecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCC---eEEEEEecccCCeEEEEECC--CCCEEEEEcCCCeEEEEEC
Q psy4393 24 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG---KFEKTISGHKLGISDVAWSS--DSRLLVSGSDDKTLKIWEL 98 (247)
Q Consensus 24 ~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~---~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~v~d~ 98 (247)
..|...|..+...--|++||+|+.|+.|+|+...+. +.+..+.+|.++|..++|.. -|.+|++++-||.|.+|.-
T Consensus 8 t~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke 87 (299)
T KOG1332|consen 8 TQHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKE 87 (299)
T ss_pred hhhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEec
Confidence 478889999999999999999999999999998753 45678999999999999976 7999999999999999998
Q ss_pred CCceE--EEEEecCCccEEEEEEcCC--CCEEEEeeCCCCEEEEECCCC---eEEEeecCCCCCeEEEEECCC---C---
Q psy4393 99 SSGKC--LKTLKGHSNYVFCCNFNPQ--SNLIVSGSFDESVRIWDVRTG---KCLKTLPAHSDPVSAVHFNRD---G--- 165 (247)
Q Consensus 99 ~~~~~--~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~v~d~~~~---~~~~~~~~~~~~i~~~~~~~~---~--- 165 (247)
.+++- ......|...|++++|.|. |-.|+.++.||.|.+++.+.. ...+...+|.-.+++++|.|. |
T Consensus 88 ~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g~~~ 167 (299)
T KOG1332|consen 88 ENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAPGSLV 167 (299)
T ss_pred CCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcCCCcccc
Confidence 87743 2345678889999999884 568899999999999998764 123445688888999999985 4
Q ss_pred --------CEEEEecCCCeEEEEeCCCceeee-eeccCCCCCeEEEEECCCC----CEEEEEEcCCeEEEEECC
Q psy4393 166 --------SLIVSSSYDGLCRIWDTASGQCLK-TLIDDDNPPVSFVKFSPNG----KYILAATLDNTLKLWDSK 226 (247)
Q Consensus 166 --------~~l~~~~~dg~i~v~d~~~~~~~~-~~~~~~~~~v~~~~~s~~~----~~l~~~~~dg~i~vwd~~ 226 (247)
+.|++|+.|..|+||+..+++.+. ..+..|..-|..++|.|.- .+||++++||++.||..+
T Consensus 168 ~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~ 241 (299)
T KOG1332|consen 168 DQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKD 241 (299)
T ss_pred ccCcccccceeeccCCccceeeeecCCcchhhhhhhhhcchhhhhhhhccccCCCceeeEEecCCCcEEEEEec
Confidence 469999999999999988764332 2255666778889999974 589999999999999765
No 118
>KOG0302|consensus
Probab=99.91 E-value=9.3e-23 Score=154.78 Aligned_cols=202 Identities=25% Similarity=0.490 Sum_probs=157.8
Q ss_pred ceEEEEEecCCCCeEEEEECCCCC-EEEEEeCCCeEEEEecCCCeEE---EEEecccCCeEEEEECCC-CCEEEEEcCCC
Q psy4393 17 YVLKFTLAGHTKAVSSVKFSPNGE-WLASSSADKLIKIWGAYDGKFE---KTISGHKLGISDVAWSSD-SRLLVSGSDDK 91 (247)
Q Consensus 17 ~~~~~~~~~h~~~v~~~~~s~~~~-~l~~~~~dg~v~iw~~~~~~~~---~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~ 91 (247)
....+++.+|...=+++.|||-.. .|++|.--+.|++|...++... ..+.+|...|.++.|+|. ...+++|+.||
T Consensus 201 ~~Pl~t~~ghk~EGy~LdWSp~~~g~LlsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~Dg 280 (440)
T KOG0302|consen 201 FRPLFTFNGHKGEGYGLDWSPIKTGRLLSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDG 280 (440)
T ss_pred cCceEEecccCccceeeecccccccccccCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecCc
Confidence 445788899999999999999433 4777777788999998876543 346679999999999995 45789999999
Q ss_pred eEEEEECCCc---eEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCC---CeEEEeecCCCCCeEEEEECCCC
Q psy4393 92 TLKIWELSSG---KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT---GKCLKTLPAHSDPVSAVHFNRDG 165 (247)
Q Consensus 92 ~i~v~d~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~---~~~~~~~~~~~~~i~~~~~~~~~ 165 (247)
.|+|||++.+ .++ ..++|.+.|+.+.|+....+||+|+.||.++|||+|+ ++++..++-|..+|+++.|+|..
T Consensus 281 sIrIWDiRs~~~~~~~-~~kAh~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e 359 (440)
T KOG0302|consen 281 SIRIWDIRSGPKKAAV-STKAHNSDVNVISWNRREPLLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAPITSIEWHPHE 359 (440)
T ss_pred eEEEEEecCCCcccee-EeeccCCceeeEEccCCcceeeecCCCceEEEEEhhhccCCCcceeEEeccCCeeEEEecccc
Confidence 9999999987 333 3488999999999999888999999999999999985 55788899999999999999954
Q ss_pred -CEEEEecCCCeEEEEeCCCcee--------ee--------e-eccCCCCCeEEEEECCCCC-EEEEEEcCCe
Q psy4393 166 -SLIVSSSYDGLCRIWDTASGQC--------LK--------T-LIDDDNPPVSFVKFSPNGK-YILAATLDNT 219 (247)
Q Consensus 166 -~~l~~~~~dg~i~v~d~~~~~~--------~~--------~-~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~ 219 (247)
..+++++.|.+|.+||+....- .. - +.......+..+.|+++-. +|++.+.||-
T Consensus 360 ~s~iaasg~D~QitiWDlsvE~D~ee~~~~a~~~L~dlPpQLLFVHqGQke~KevhWH~QiPG~lvsTa~dGf 432 (440)
T KOG0302|consen 360 DSVIAASGEDNQITIWDLSVEADEEEIDQEAAEGLQDLPPQLLFVHQGQKEVKEVHWHRQIPGLLVSTAIDGF 432 (440)
T ss_pred CceEEeccCCCcEEEEEeeccCChhhhccccccchhcCCceeEEEecchhHhhhheeccCCCCeEEEecccce
Confidence 4778889999999999863211 00 0 1111233455678888754 5666666763
No 119
>KOG0639|consensus
Probab=99.91 E-value=2.3e-23 Score=163.46 Aligned_cols=197 Identities=22% Similarity=0.442 Sum_probs=167.7
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCe--EEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceEE
Q psy4393 27 TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK--FEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCL 104 (247)
Q Consensus 27 ~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~ 104 (247)
..-|.++.+.|||+.|++|++-.++.|||+.... ....+......+..++.+||.+..+++..||.|.|||+.+...+
T Consensus 465 dnyiRSckL~pdgrtLivGGeastlsiWDLAapTprikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq~~V 544 (705)
T KOG0639|consen 465 DNYIRSCKLLPDGRTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLV 544 (705)
T ss_pred ccceeeeEecCCCceEEeccccceeeeeeccCCCcchhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccceee
Confidence 3458899999999999999999999999986543 33344444456788999999999999999999999999999999
Q ss_pred EEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEE--------------------------------------
Q psy4393 105 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCL-------------------------------------- 146 (247)
Q Consensus 105 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~-------------------------------------- 146 (247)
+.+++|.+.+.|+.++++|..|-+|+-|.+++.||++.++.+
T Consensus 545 rqfqGhtDGascIdis~dGtklWTGGlDntvRcWDlregrqlqqhdF~SQIfSLg~cP~~dWlavGMens~vevlh~skp 624 (705)
T KOG0639|consen 545 RQFQGHTDGASCIDISKDGTKLWTGGLDNTVRCWDLREGRQLQQHDFSSQIFSLGYCPTGDWLAVGMENSNVEVLHTSKP 624 (705)
T ss_pred ecccCCCCCceeEEecCCCceeecCCCccceeehhhhhhhhhhhhhhhhhheecccCCCccceeeecccCcEEEEecCCc
Confidence 999999999999999999999999999999999999875321
Q ss_pred --EeecCCCCCeEEEEECCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEE
Q psy4393 147 --KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224 (247)
Q Consensus 147 --~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd 224 (247)
..+..|+..|.++.|.+.|+++++.+.|..+..|...-|..+ +...+.++|.++.+|-|.+++++|+.|....||+
T Consensus 625 ~kyqlhlheScVLSlKFa~cGkwfvStGkDnlLnawrtPyGasi--FqskE~SsVlsCDIS~ddkyIVTGSGdkkATVYe 702 (705)
T KOG0639|consen 625 EKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISFDDKYIVTGSGDKKATVYE 702 (705)
T ss_pred cceeecccccEEEEEEecccCceeeecCchhhhhhccCccccce--eeccccCcceeeeeccCceEEEecCCCcceEEEE
Confidence 112345677899999999999999999999999987766544 3446678899999999999999999999999986
Q ss_pred C
Q psy4393 225 S 225 (247)
Q Consensus 225 ~ 225 (247)
+
T Consensus 703 V 703 (705)
T KOG0639|consen 703 V 703 (705)
T ss_pred E
Confidence 4
No 120
>KOG2048|consensus
Probab=99.90 E-value=5.9e-21 Score=154.48 Aligned_cols=203 Identities=25% Similarity=0.396 Sum_probs=165.8
Q ss_pred CCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEE-EEecc-cCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceE
Q psy4393 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK-TISGH-KLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKC 103 (247)
Q Consensus 26 h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~-~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~ 103 (247)
-..+|.++||+...+.||.+-.+|.|.+|+....-... .+.++ ...|..++|++ +..|++.+.+|.|.-||+-+++.
T Consensus 24 ~Ps~I~slA~s~kS~~lAvsRt~g~IEiwN~~~~w~~~~vi~g~~drsIE~L~W~e-~~RLFS~g~sg~i~EwDl~~lk~ 102 (691)
T KOG2048|consen 24 KPSEIVSLAYSHKSNQLAVSRTDGNIEIWNLSNNWFLEPVIHGPEDRSIESLAWAE-GGRLFSSGLSGSITEWDLHTLKQ 102 (691)
T ss_pred eccceEEEEEeccCCceeeeccCCcEEEEccCCCceeeEEEecCCCCceeeEEEcc-CCeEEeecCCceEEEEecccCce
Confidence 36889999999999999999999999999998754443 34444 45699999995 55688888999999999999998
Q ss_pred EEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEE--eecCCCCCeEEEEECCCCCEEEEecCCCeEEEEe
Q psy4393 104 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLK--TLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181 (247)
Q Consensus 104 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~--~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d 181 (247)
...+....+.|++++.+|.+..++.|+.||.+..++...+.... .+....+.+.++.|+|++..+++|+.||.|++||
T Consensus 103 ~~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd 182 (691)
T KOG2048|consen 103 KYNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDGVIRIWD 182 (691)
T ss_pred eEEecCCCcceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecccccceEEEEEecCCccEEEecccCceEEEEE
Confidence 88888888999999999999999999999988888887776543 3445568899999999999999999999999999
Q ss_pred CCCceeeeeec------cC-CCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcce
Q psy4393 182 TASGQCLKTLI------DD-DNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTP 230 (247)
Q Consensus 182 ~~~~~~~~~~~------~~-~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~ 230 (247)
+..++...... .. ...-|..+.|-.+ ..|++|...|.|.+||...++.
T Consensus 183 ~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd-~tI~sgDS~G~V~FWd~~~gTL 237 (691)
T KOG2048|consen 183 VKSGQTLHIITMQLDRLSKREPTIVWSVLFLRD-STIASGDSAGTVTFWDSIFGTL 237 (691)
T ss_pred cCCCceEEEeeecccccccCCceEEEEEEEeec-CcEEEecCCceEEEEcccCcch
Confidence 99887665211 11 2334566666544 4799999999999999877653
No 121
>KOG4328|consensus
Probab=99.90 E-value=3.5e-22 Score=154.98 Aligned_cols=203 Identities=19% Similarity=0.308 Sum_probs=161.6
Q ss_pred ecCCCCeEEEEECCCCC--EEEEEeCCCeEEEEecCC----CeEEEEEecccCCeEEEEECC-CCCEEEEEcCCCeEEEE
Q psy4393 24 AGHTKAVSSVKFSPNGE--WLASSSADKLIKIWGAYD----GKFEKTISGHKLGISDVAWSS-DSRLLVSGSDDKTLKIW 96 (247)
Q Consensus 24 ~~h~~~v~~~~~s~~~~--~l~~~~~dg~v~iw~~~~----~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~v~ 96 (247)
+-+.++|++++|+|..+ ++|+|...|.|-+||... ..-...+..|..+|.++.|+| +...+++.+.||+|++-
T Consensus 183 kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGtiR~~ 262 (498)
T KOG4328|consen 183 KVTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGTIRLQ 262 (498)
T ss_pred EecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhheeeeccCceeeee
Confidence 34789999999999654 678889999999999842 223345677889999999999 45679999999999999
Q ss_pred ECCCceE--EEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeE-EEeecCCCCCeEEEEECCCCC-EEEEec
Q psy4393 97 ELSSGKC--LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC-LKTLPAHSDPVSAVHFNRDGS-LIVSSS 172 (247)
Q Consensus 97 d~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~-~~~~~~~~~~i~~~~~~~~~~-~l~~~~ 172 (247)
|+++... +..+......+..+.++.+...++++..=|.+.+||++++.. ...+..|...|..|+++|... +|++++
T Consensus 263 D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI~sv~~NP~~p~~laT~s 342 (498)
T KOG4328|consen 263 DFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHKKKITSVALNPVCPWFLATAS 342 (498)
T ss_pred eecchhhHHHhhcCccceeeeeccccCCCccEEEeecccceEEEEeecCCccchhhhhhhcccceeecCCCCchheeecc
Confidence 9987542 223322334566778888777788887778999999998654 666777888999999999654 789999
Q ss_pred CCCeEEEEeCCCceeeee---eccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECC
Q psy4393 173 YDGLCRIWDTASGQCLKT---LIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSK 226 (247)
Q Consensus 173 ~dg~i~v~d~~~~~~~~~---~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~ 226 (247)
.|++.+|||++.-..... ....|...|....|||++-.|++.+.|++|+|||..
T Consensus 343 ~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss 399 (498)
T KOG4328|consen 343 LDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSS 399 (498)
T ss_pred cCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCceEeeccCCceEEeecc
Confidence 999999999987544432 123566789999999999889999999999999984
No 122
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.90 E-value=4.4e-20 Score=145.03 Aligned_cols=211 Identities=16% Similarity=0.186 Sum_probs=157.5
Q ss_pred CeEEEEECCCCCEEEEE-eCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCC-eEEEEECCCceEEEE
Q psy4393 29 AVSSVKFSPNGEWLASS-SADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDK-TLKIWELSSGKCLKT 106 (247)
Q Consensus 29 ~v~~~~~s~~~~~l~~~-~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-~i~v~d~~~~~~~~~ 106 (247)
.+..++|+|+++.++++ ..++.+++||..+.+....+.. ...+..++|+|+++.++++..++ .+.+||..+++....
T Consensus 74 ~~~~~~~~~~g~~l~~~~~~~~~l~~~d~~~~~~~~~~~~-~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~~~~ 152 (300)
T TIGR03866 74 DPELFALHPNGKILYIANEDDNLVTVIDIETRKVLAEIPV-GVEPEGMAVSPDGKIVVNTSETTNMAHFIDTKTYEIVDN 152 (300)
T ss_pred CccEEEECCCCCEEEEEcCCCCeEEEEECCCCeEEeEeeC-CCCcceEEECCCCCEEEEEecCCCeEEEEeCCCCeEEEE
Confidence 35678999999977654 5689999999988766655542 33467899999999998888765 567789988776554
Q ss_pred EecCCccEEEEEEcCCCCEEEEe-eCCCCEEEEECCCCeEEEeecCCC-----C--CeEEEEECCCCCEEEE-ecCCCeE
Q psy4393 107 LKGHSNYVFCCNFNPQSNLIVSG-SFDESVRIWDVRTGKCLKTLPAHS-----D--PVSAVHFNRDGSLIVS-SSYDGLC 177 (247)
Q Consensus 107 ~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~v~d~~~~~~~~~~~~~~-----~--~i~~~~~~~~~~~l~~-~~~dg~i 177 (247)
+... .....+.|+|+++.++++ ..++.+++||+++++.+..+..+. . ....++|+|+++++++ .+.++.+
T Consensus 153 ~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i 231 (300)
T TIGR03866 153 VLVD-QRPRFAEFTADGKELWVSSEIGGTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPANRV 231 (300)
T ss_pred EEcC-CCccEEEECCCCCEEEEEcCCCCEEEEEEcCcceeeeeeeecccccccccCCccceEECCCCCEEEEEcCCCCeE
Confidence 4322 334678999999988554 468999999999987766543221 1 2245789999998654 3456789
Q ss_pred EEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEE-cCCeEEEEECCCcceEEEEccCCcccce
Q psy4393 178 RIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT-LDNTLKLWDSKVVTPAIICSTPLNLNYF 243 (247)
Q Consensus 178 ~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 243 (247)
.+||+.+++....... ...+..++|+|+|++|+++. .+|.|++||.++..++..++....|+.+
T Consensus 232 ~v~d~~~~~~~~~~~~--~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~ 296 (300)
T TIGR03866 232 AVVDAKTYEVLDYLLV--GQRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAALKVIKSIKVGRLPWGV 296 (300)
T ss_pred EEEECCCCcEEEEEEe--CCCcceEEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEEccccccee
Confidence 9999988876654432 23578899999999998864 6899999999999988888777666654
No 123
>KOG0270|consensus
Probab=99.90 E-value=2.9e-22 Score=154.79 Aligned_cols=208 Identities=25% Similarity=0.345 Sum_probs=163.3
Q ss_pred ecCCCCeEEEEECCCCC-EEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCC-CCEEEEEcCCCeEEEEECCCc
Q psy4393 24 AGHTKAVSSVKFSPNGE-WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD-SRLLVSGSDDKTLKIWELSSG 101 (247)
Q Consensus 24 ~~h~~~v~~~~~s~~~~-~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~v~d~~~~ 101 (247)
.+|+..|.+++|+..-+ .||+|+.|.+|++||+.++++...+..|...|.++.|+|. ...+++|+.|+++.+.|.+..
T Consensus 240 ~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~ 319 (463)
T KOG0270|consen 240 SGHTDAVLALSWNRNFRNVLASGSADKTVKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDP 319 (463)
T ss_pred ccchHHHHHHHhccccceeEEecCCCceEEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCc
Confidence 36899999999988654 6789999999999999999999999989999999999994 678999999999999999853
Q ss_pred eEEEEEecCCccEEEEEEcCCC-CEEEEeeCCCCEEEEECCCC-eEEEeecCCCCCeEEEEECCCC-CEEEEecCCCeEE
Q psy4393 102 KCLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVRTG-KCLKTLPAHSDPVSAVHFNRDG-SLIVSSSYDGLCR 178 (247)
Q Consensus 102 ~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~v~d~~~~-~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~ 178 (247)
......-...+.|..+.|+|.. ..++++..||.++-+|+|.. +++..+++|.++|.++++++.- .++++++.++.++
T Consensus 320 ~~s~~~wk~~g~VEkv~w~~~se~~f~~~tddG~v~~~D~R~~~~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vk 399 (463)
T KOG0270|consen 320 SNSGKEWKFDGEVEKVAWDPHSENSFFVSTDDGTVYYFDIRNPGKPVWTLKAHDDEISGLSVNIQTPGLLSTASTDKVVK 399 (463)
T ss_pred cccCceEEeccceEEEEecCCCceeEEEecCCceEEeeecCCCCCceeEEEeccCCcceEEecCCCCcceeeccccceEE
Confidence 2222111234568888999865 45677789999999999975 7899999999999999998854 4788899999999
Q ss_pred EEeCCCceeeeeeccC-CCCCeEEEEECCCCC-EEEEEEcCCeEEEEECCCcceE
Q psy4393 179 IWDTASGQCLKTLIDD-DNPPVSFVKFSPNGK-YILAATLDNTLKLWDSKVVTPA 231 (247)
Q Consensus 179 v~d~~~~~~~~~~~~~-~~~~v~~~~~s~~~~-~l~~~~~dg~i~vwd~~~~~~~ 231 (247)
+|++............ .-+...|.++.|+-. +++.|+..+.++|||..+..++
T Consensus 400 lw~~~~~~~~~v~~~~~~~~rl~c~~~~~~~a~~la~GG~k~~~~vwd~~~~~~V 454 (463)
T KOG0270|consen 400 LWKFDVDSPKSVKEHSFKLGRLHCFALDPDVAFTLAFGGEKAVLRVWDIFTNSPV 454 (463)
T ss_pred EEeecCCCCcccccccccccceeecccCCCcceEEEecCccceEEEeecccChhH
Confidence 9998654332111111 112356677777765 5667788889999998877654
No 124
>KOG0641|consensus
Probab=99.89 E-value=2.9e-20 Score=132.83 Aligned_cols=204 Identities=25% Similarity=0.438 Sum_probs=165.5
Q ss_pred EEecCCCCeEEEEECCC----CCEEEEEe-CCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEE
Q psy4393 22 TLAGHTKAVSSVKFSPN----GEWLASSS-ADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIW 96 (247)
Q Consensus 22 ~~~~h~~~v~~~~~s~~----~~~l~~~~-~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~ 96 (247)
++.-|.+.|..++|..+ |..|++++ .|-.|++=|...+....-+.+|.+.|.++ ++-++-.+++|+.|.+|++|
T Consensus 131 e~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g~~~~a~sghtghilal-yswn~~m~~sgsqdktirfw 209 (350)
T KOG0641|consen 131 EFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGRGQGFHALSGHTGHILAL-YSWNGAMFASGSQDKTIRFW 209 (350)
T ss_pred eeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCCCCcceeecCCcccEEEE-EEecCcEEEccCCCceEEEE
Confidence 34458899999999643 34666654 34566666777788888899999988876 34457889999999999999
Q ss_pred ECCCceEEEEEec-------CCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEE
Q psy4393 97 ELSSGKCLKTLKG-------HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIV 169 (247)
Q Consensus 97 d~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 169 (247)
|++-..++..+.. ..+.|..++..|.|.++++|-.|....+||++.++.++.+..|...|.|+.|+|.-.+++
T Consensus 210 dlrv~~~v~~l~~~~~~~glessavaav~vdpsgrll~sg~~dssc~lydirg~r~iq~f~phsadir~vrfsp~a~yll 289 (350)
T KOG0641|consen 210 DLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCMLYDIRGGRMIQRFHPHSADIRCVRFSPGAHYLL 289 (350)
T ss_pred eeeccceeeeccCcccCCCcccceeEEEEECCCcceeeeccCCCceEEEEeeCCceeeeeCCCccceeEEEeCCCceEEE
Confidence 9987777766532 125688899999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCeEEEEeCCCc---eeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECC
Q psy4393 170 SSSYDGLCRIWDTASG---QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSK 226 (247)
Q Consensus 170 ~~~~dg~i~v~d~~~~---~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~ 226 (247)
+++.|..|++-|+... +........+...+..+.|+|+.--+++.+.|.++.+|-.+
T Consensus 290 t~syd~~ikltdlqgdla~el~~~vv~ehkdk~i~~rwh~~d~sfisssadkt~tlwa~~ 349 (350)
T KOG0641|consen 290 TCSYDMKIKLTDLQGDLAHELPIMVVAEHKDKAIQCRWHPQDFSFISSSADKTATLWALN 349 (350)
T ss_pred EecccceEEEeecccchhhcCceEEEEeccCceEEEEecCccceeeeccCcceEEEeccC
Confidence 9999999999998642 22222334555667789999999889999999999999653
No 125
>KOG0646|consensus
Probab=99.89 E-value=1.6e-21 Score=151.65 Aligned_cols=184 Identities=25% Similarity=0.456 Sum_probs=154.3
Q ss_pred ecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecC---------CCeEEEEEecccCCeEEEEECCC--CCEEEEEcCCCe
Q psy4393 24 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY---------DGKFEKTISGHKLGISDVAWSSD--SRLLVSGSDDKT 92 (247)
Q Consensus 24 ~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~---------~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~ 92 (247)
.+|-.+|+++.|+-||.++++|+.||.|.+|.+. +......+..|..+|+++...+. ..++++++.|.+
T Consensus 120 ~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t 199 (476)
T KOG0646|consen 120 SAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRT 199 (476)
T ss_pred HhhccceeEEEEeCCCcEEEecCCCccEEEEEEEeecccccCCCccceeeeccCcceeEEEEecCCCccceEEEecCCce
Confidence 4688999999999999999999999999999752 23456778889999999988765 457999999999
Q ss_pred EEEEECCCceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCC----------------eEEEeecCCCC--
Q psy4393 93 LKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG----------------KCLKTLPAHSD-- 154 (247)
Q Consensus 93 i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~----------------~~~~~~~~~~~-- 154 (247)
+++||+..+..+..+. ....+.++..+|.+..++.|+.+|.|.+.++... ..+..+.+|.+
T Consensus 200 ~k~wdlS~g~LLlti~-fp~si~av~lDpae~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~ 278 (476)
T KOG0646|consen 200 IKLWDLSLGVLLLTIT-FPSSIKAVALDPAERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENES 278 (476)
T ss_pred EEEEEeccceeeEEEe-cCCcceeEEEcccccEEEecCCcceEEeeehhcCCcccccccccccccccceeeeeccccCCc
Confidence 9999999998877766 4566889999999999999999999988877432 23455667777
Q ss_pred CeEEEEECCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCC
Q psy4393 155 PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK 209 (247)
Q Consensus 155 ~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 209 (247)
+|+|++++-||.+|++|+.||.+++||+.+.++++++.. ..++|+.+.+.|-.+
T Consensus 279 ~ITcLais~DgtlLlSGd~dg~VcvWdi~S~Q~iRtl~~-~kgpVtnL~i~~~~~ 332 (476)
T KOG0646|consen 279 AITCLAISTDGTLLLSGDEDGKVCVWDIYSKQCIRTLQT-SKGPVTNLQINPLER 332 (476)
T ss_pred ceeEEEEecCccEEEeeCCCCCEEEEecchHHHHHHHhh-hccccceeEeecccc
Confidence 999999999999999999999999999999988877653 346788888865433
No 126
>KOG0639|consensus
Probab=99.89 E-value=5.7e-22 Score=155.75 Aligned_cols=200 Identities=21% Similarity=0.407 Sum_probs=160.2
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCe---EEEEE--ecccCCeEEEEECCCCCEEEEEcCCCeEEEEECC
Q psy4393 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK---FEKTI--SGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELS 99 (247)
Q Consensus 25 ~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~---~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~ 99 (247)
.|.+-|.+++++...+++++|+ .|.|+|||+.... .+..+ ......+.++...|||+.|++|+...++.|||+.
T Consensus 417 ~HGEvVcAvtIS~~trhVyTgG-kgcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgrtLivGGeastlsiWDLA 495 (705)
T KOG0639|consen 417 AHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLSIWDLA 495 (705)
T ss_pred ccCcEEEEEEecCCcceeEecC-CCeEEEeeccCCCCCCccccccccCcccceeeeEecCCCceEEeccccceeeeeecc
Confidence 5888888999999999999987 4789999986432 12222 2234568899999999999999999999999997
Q ss_pred CceEE--EEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCCCeE
Q psy4393 100 SGKCL--KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 177 (247)
Q Consensus 100 ~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i 177 (247)
....- ..+........+++.+||.++.++++.||.|.|||+.+...+..++.|...+.|+.+++||..|-+|+.|.++
T Consensus 496 apTprikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq~~VrqfqGhtDGascIdis~dGtklWTGGlDntv 575 (705)
T KOG0639|consen 496 APTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISKDGTKLWTGGLDNTV 575 (705)
T ss_pred CCCcchhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccceeeecccCCCCCceeEEecCCCceeecCCCccce
Confidence 64321 1222222334567889999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCceeeee---------------------------------------eccCCCCCeEEEEECCCCCEEEEEEcCC
Q psy4393 178 RIWDTASGQCLKT---------------------------------------LIDDDNPPVSFVKFSPNGKYILAATLDN 218 (247)
Q Consensus 178 ~v~d~~~~~~~~~---------------------------------------~~~~~~~~v~~~~~s~~~~~l~~~~~dg 218 (247)
+-||+++++.+.. ....+.+.|..+.|.+.|+++++.+.|+
T Consensus 576 RcWDlregrqlqqhdF~SQIfSLg~cP~~dWlavGMens~vevlh~skp~kyqlhlheScVLSlKFa~cGkwfvStGkDn 655 (705)
T KOG0639|consen 576 RCWDLREGRQLQQHDFSSQIFSLGYCPTGDWLAVGMENSNVEVLHTSKPEKYQLHLHESCVLSLKFAYCGKWFVSTGKDN 655 (705)
T ss_pred eehhhhhhhhhhhhhhhhhheecccCCCccceeeecccCcEEEEecCCccceeecccccEEEEEEecccCceeeecCchh
Confidence 9999998643211 0122345677899999999999999999
Q ss_pred eEEEEEC
Q psy4393 219 TLKLWDS 225 (247)
Q Consensus 219 ~i~vwd~ 225 (247)
.+..|..
T Consensus 656 lLnawrt 662 (705)
T KOG0639|consen 656 LLNAWRT 662 (705)
T ss_pred hhhhccC
Confidence 8888764
No 127
>KOG2445|consensus
Probab=99.89 E-value=2.1e-20 Score=138.75 Aligned_cols=202 Identities=25% Similarity=0.430 Sum_probs=157.4
Q ss_pred ecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCC----CeEEEEEecccCCeEEEEECC--CCCEEEEEcCCCeEEEEE
Q psy4393 24 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD----GKFEKTISGHKLGISDVAWSS--DSRLLVSGSDDKTLKIWE 97 (247)
Q Consensus 24 ~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~----~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~v~d 97 (247)
.+|..-|.++.|.+.|+++|+|+.|++++|||... ..+....+.|.+.|..+.|.+ -|+.+++++.|+++.||.
T Consensus 10 s~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWE 89 (361)
T KOG2445|consen 10 SGHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWE 89 (361)
T ss_pred cCCcceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeee
Confidence 37888999999999999999999999999999532 234556788999999999976 489999999999999997
Q ss_pred CCC------c---eEEEEEecCCccEEEEEEcCC--CCEEEEeeCCCCEEEEECCCCe----------------------
Q psy4393 98 LSS------G---KCLKTLKGHSNYVFCCNFNPQ--SNLIVSGSFDESVRIWDVRTGK---------------------- 144 (247)
Q Consensus 98 ~~~------~---~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~v~d~~~~~---------------------- 144 (247)
-.. + ....++....+.|..+.|.|. |-.+|+++.||.+|||+.....
T Consensus 90 E~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~~~ 169 (361)
T KOG2445|consen 90 EQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGKNK 169 (361)
T ss_pred ecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCccccc
Confidence 521 1 123455666778999999884 5678999999999999763210
Q ss_pred ---------------------------------------------EEEeecCCCCCeEEEEECCCC----CEEEEecCCC
Q psy4393 145 ---------------------------------------------CLKTLPAHSDPVSAVHFNRDG----SLIVSSSYDG 175 (247)
Q Consensus 145 ---------------------------------------------~~~~~~~~~~~i~~~~~~~~~----~~l~~~~~dg 175 (247)
.+..+..|..+|+.++|.|+- .+||+++.||
T Consensus 170 ~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn~Gr~y~~lAvA~kDg 249 (361)
T KOG2445|consen 170 QPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWAPNIGRSYHLLAVATKDG 249 (361)
T ss_pred CcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcceeeeeccccCCceeeEEEeecCc
Confidence 011223456789999999962 4789999999
Q ss_pred eEEEEeCCCce-----------------e--eeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECC
Q psy4393 176 LCRIWDTASGQ-----------------C--LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSK 226 (247)
Q Consensus 176 ~i~v~d~~~~~-----------------~--~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~ 226 (247)
|+||.+.... . +...+..|+..|..+.|+-.|..|++.+.||.||+|..+
T Consensus 250 -v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtGtiLsStGdDG~VRLWkan 318 (361)
T KOG2445|consen 250 -VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTGTILSSTGDDGCVRLWKAN 318 (361)
T ss_pred -EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeeeeeEEeecCCCceeeehhhh
Confidence 9999987311 0 111244677889999999999999999999999999864
No 128
>KOG0301|consensus
Probab=99.89 E-value=2.4e-21 Score=157.10 Aligned_cols=205 Identities=25% Similarity=0.459 Sum_probs=172.5
Q ss_pred ceEEEEEecCCCCeEE-EEECC-CCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEE
Q psy4393 17 YVLKFTLAGHTKAVSS-VKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLK 94 (247)
Q Consensus 17 ~~~~~~~~~h~~~v~~-~~~s~-~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 94 (247)
|.....+.+|.+-|.. ++|.+ ++-++++|+.|+.+.+|..........+.+|...|.+++...++. +++++.|.+++
T Consensus 47 ~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D~~i~v~~~~~~~P~~~LkgH~snVC~ls~~~~~~-~iSgSWD~Tak 125 (745)
T KOG0301|consen 47 YLETHAFEGPKGFIANSICYAESDKGRLVVGGMDTTIIVFKLSQAEPLYTLKGHKSNVCSLSIGEDGT-LISGSWDSTAK 125 (745)
T ss_pred cccceecccCcceeeccceeccccCcceEeecccceEEEEecCCCCchhhhhccccceeeeecCCcCc-eEecccccceE
Confidence 4444556678877777 88876 444688999999999999999999999999999999998887776 89999999999
Q ss_pred EEECCCceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCC
Q psy4393 95 IWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 174 (247)
Q Consensus 95 v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 174 (247)
+|... ++...+.+|...|+++..-|.+ .++||+.|..|++|.- ++.++.+.+|...|+.+++-+++. +++++.|
T Consensus 126 vW~~~--~l~~~l~gH~asVWAv~~l~e~-~~vTgsaDKtIklWk~--~~~l~tf~gHtD~VRgL~vl~~~~-flScsND 199 (745)
T KOG0301|consen 126 VWRIG--ELVYSLQGHTASVWAVASLPEN-TYVTGSADKTIKLWKG--GTLLKTFSGHTDCVRGLAVLDDSH-FLSCSND 199 (745)
T ss_pred Eecch--hhhcccCCcchheeeeeecCCC-cEEeccCcceeeeccC--CchhhhhccchhheeeeEEecCCC-eEeecCC
Confidence 99874 4555689999999999998877 8999999999999985 778899999999999999988754 7889999
Q ss_pred CeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcce
Q psy4393 175 GLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTP 230 (247)
Q Consensus 175 g~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~ 230 (247)
|.|+.|++ +++.+.... .+..-+.+++..++++.++++++|++++||+.....+
T Consensus 200 g~Ir~w~~-~ge~l~~~~-ghtn~vYsis~~~~~~~Ivs~gEDrtlriW~~~e~~q 253 (745)
T KOG0301|consen 200 GSIRLWDL-DGEVLLEMH-GHTNFVYSISMALSDGLIVSTGEDRTLRIWKKDECVQ 253 (745)
T ss_pred ceEEEEec-cCceeeeee-ccceEEEEEEecCCCCeEEEecCCceEEEeecCceEE
Confidence 99999999 455555443 4556678888888889999999999999999874433
No 129
>KOG0647|consensus
Probab=99.89 E-value=6.8e-21 Score=140.93 Aligned_cols=189 Identities=26% Similarity=0.379 Sum_probs=146.6
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCC--EEEEEcCCCeEEEEECCCce
Q psy4393 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR--LLVSGSDDKTLKIWELSSGK 102 (247)
Q Consensus 25 ~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~d~~i~v~d~~~~~ 102 (247)
.|.++|.+++|+.||..+++|+.|+.+++||+.++ ....+..|..+|..+.|-+... .|+||+.|.+|+.||.+...
T Consensus 70 ~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~-Q~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~ 148 (347)
T KOG0647|consen 70 SHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASG-QVSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSN 148 (347)
T ss_pred ccCCCeEEEEEccCCceEEeeccCCceEEEEccCC-CeeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCC
Confidence 47899999999999999999999999999999888 4567778999999999987655 79999999999999998765
Q ss_pred EEEEEecC-----------------------------------------CccEEEEEEcCCCCEEEEeeCCCCEEEEECC
Q psy4393 103 CLKTLKGH-----------------------------------------SNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141 (247)
Q Consensus 103 ~~~~~~~~-----------------------------------------~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~ 141 (247)
.+..+.-. .-.++|++..++....+.|+-+|.+-+..+.
T Consensus 149 pv~t~~LPeRvYa~Dv~~pm~vVata~r~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id 228 (347)
T KOG0647|consen 149 PVATLQLPERVYAADVLYPMAVVATAERHIAVYNLENPPTEFKRIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYID 228 (347)
T ss_pred eeeeeeccceeeehhccCceeEEEecCCcEEEEEcCCCcchhhhhcCcccceeeEEEEEecCCceEeeeecceEEEEecC
Confidence 54433210 1124566666666666777777777777666
Q ss_pred CC--eEEEeecCCCC---------CeEEEEECCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCE
Q psy4393 142 TG--KCLKTLPAHSD---------PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKY 210 (247)
Q Consensus 142 ~~--~~~~~~~~~~~---------~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 210 (247)
.+ +.-..|+.|.. +|.+++|+|....|++++.||...+||-.....++.. ..+..+|++..|+.+|.+
T Consensus 229 ~~~~~~nFtFkCHR~~~~~~~~VYaVNsi~FhP~hgtlvTaGsDGtf~FWDkdar~kLk~s-~~~~qpItcc~fn~~G~i 307 (347)
T KOG0647|consen 229 DPNPKDNFTFKCHRSTNSVNDDVYAVNSIAFHPVHGTLVTAGSDGTFSFWDKDARTKLKTS-ETHPQPITCCSFNRNGSI 307 (347)
T ss_pred CCCccCceeEEEeccCCCCCCceEEecceEeecccceEEEecCCceEEEecchhhhhhhcc-CcCCCccceeEecCCCCE
Confidence 54 22334444442 4778999999899999999999999998766555443 345678999999999999
Q ss_pred EEEEE
Q psy4393 211 ILAAT 215 (247)
Q Consensus 211 l~~~~ 215 (247)
++.+.
T Consensus 308 faYA~ 312 (347)
T KOG0647|consen 308 FAYAL 312 (347)
T ss_pred EEEEe
Confidence 98764
No 130
>KOG2048|consensus
Probab=99.89 E-value=4.1e-20 Score=149.68 Aligned_cols=214 Identities=24% Similarity=0.375 Sum_probs=176.0
Q ss_pred CCCCCceEEEEEecCC-CCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCC
Q psy4393 12 NPKPNYVLKFTLAGHT-KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDD 90 (247)
Q Consensus 12 ~~~~~~~~~~~~~~h~-~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 90 (247)
++.++|.+...+.++. +.|-+++|++ +.+|++.+.+|.|..||+.+.+....+....+.|.+++.+|.+..++.+++|
T Consensus 53 N~~~~w~~~~vi~g~~drsIE~L~W~e-~~RLFS~g~sg~i~EwDl~~lk~~~~~d~~gg~IWsiai~p~~~~l~Igcdd 131 (691)
T KOG2048|consen 53 NLSNNWFLEPVIHGPEDRSIESLAWAE-GGRLFSSGLSGSITEWDLHTLKQKYNIDSNGGAIWSIAINPENTILAIGCDD 131 (691)
T ss_pred ccCCCceeeEEEecCCCCceeeEEEcc-CCeEEeecCCceEEEEecccCceeEEecCCCcceeEEEeCCccceEEeecCC
Confidence 4566788888888775 6799999994 5567788899999999999999888888888899999999999999999999
Q ss_pred CeEEEEECCCceEE--EEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEee-----cC---CCCCeEEEE
Q psy4393 91 KTLKIWELSSGKCL--KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTL-----PA---HSDPVSAVH 160 (247)
Q Consensus 91 ~~i~v~d~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~-----~~---~~~~i~~~~ 160 (247)
|.+..++...++.. ..+....+++.++.|+|++..+++|+.||.|++||...+..+... .. ....|.++.
T Consensus 132 Gvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~ 211 (691)
T KOG2048|consen 132 GVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDGVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVL 211 (691)
T ss_pred ceEEEEecCCceEEEEeecccccceEEEEEecCCccEEEecccCceEEEEEcCCCceEEEeeecccccccCCceEEEEEE
Confidence 98887777766533 234445688999999999999999999999999999998876622 11 223467888
Q ss_pred ECCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCc
Q psy4393 161 FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVV 228 (247)
Q Consensus 161 ~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~ 228 (247)
+-.++ .+++|...|.|.+||...+...+.... +...|.+++.++++.++++++.|+.|.-|.....
T Consensus 212 ~Lrd~-tI~sgDS~G~V~FWd~~~gTLiqS~~~-h~adVl~Lav~~~~d~vfsaGvd~~ii~~~~~~~ 277 (691)
T KOG2048|consen 212 FLRDS-TIASGDSAGTVTFWDSIFGTLIQSHSC-HDADVLALAVADNEDRVFSAGVDPKIIQYSLTTN 277 (691)
T ss_pred EeecC-cEEEecCCceEEEEcccCcchhhhhhh-hhcceeEEEEcCCCCeEEEccCCCceEEEEecCC
Confidence 87655 588999999999999999887765433 4567899999999999999999999888876554
No 131
>KOG1408|consensus
Probab=99.88 E-value=2e-21 Score=158.53 Aligned_cols=200 Identities=22% Similarity=0.409 Sum_probs=170.0
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECC---CCCEEEEEcCCCeEEEEECCCc
Q psy4393 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS---DSRLLVSGSDDKTLKIWELSSG 101 (247)
Q Consensus 25 ~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~i~v~d~~~~ 101 (247)
+-...+.+++.+|+|++||+|..-|.++||++...+....+..|+..|.++.++. ..++|++++.|..|++||+...
T Consensus 457 d~r~G~R~~~vSp~gqhLAsGDr~GnlrVy~Lq~l~~~~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rn 536 (1080)
T KOG1408|consen 457 DSRFGFRALAVSPDGQHLASGDRGGNLRVYDLQELEYTCFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRN 536 (1080)
T ss_pred CcccceEEEEECCCcceecccCccCceEEEEehhhhhhhheecccceeEEEeecCchhhhHhhhhccCCceEEEEecccc
Confidence 4567899999999999999999999999999998888888999999999999985 3567899999999999997531
Q ss_pred -eEEEEEec-------------------------------------------------CCccEEEEEEcCCCCEEEEeeC
Q psy4393 102 -KCLKTLKG-------------------------------------------------HSNYVFCCNFNPQSNLIVSGSF 131 (247)
Q Consensus 102 -~~~~~~~~-------------------------------------------------~~~~v~~~~~~~~~~~l~~~~~ 131 (247)
..+.++.+ ....++.++..|..+++++++.
T Consensus 537 y~l~qtld~HSssITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQ 616 (1080)
T KOG1408|consen 537 YDLVQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVCQ 616 (1080)
T ss_pred cchhhhhcccccceeEEEEeecCCceEEEeccCchhhheehhccccCceeccccccccccceEEEeeeCCCcceEEEEec
Confidence 00001000 1233677888899999999999
Q ss_pred CCCEEEEECCCCeEEEeec---CCCCCeEEEEECCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCC
Q psy4393 132 DESVRIWDVRTGKCLKTLP---AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG 208 (247)
Q Consensus 132 d~~i~v~d~~~~~~~~~~~---~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~ 208 (247)
|+.|++||+.+++..+.|+ .|++....+..+|.|-++++.+.|..+.++|..++++..... +|...|+.+.|.+|-
T Consensus 617 Drnirif~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEcvA~m~-GHsE~VTG~kF~nDC 695 (1080)
T KOG1408|consen 617 DRNIRIFDIESGKQVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGECVAQMT-GHSEAVTGVKFLNDC 695 (1080)
T ss_pred ccceEEEeccccceeeeecccccCCCceEEEEECCCccEEEEeecCCceEEEEeccchhhhhhc-Ccchheeeeeecccc
Confidence 9999999999999988886 455667788999999999999999999999999999987765 455679999999999
Q ss_pred CEEEEEEcCCeEEEEEC
Q psy4393 209 KYILAATLDNTLKLWDS 225 (247)
Q Consensus 209 ~~l~~~~~dg~i~vwd~ 225 (247)
++|++.+.||-|-||.+
T Consensus 696 kHlISvsgDgCIFvW~l 712 (1080)
T KOG1408|consen 696 KHLISVSGDGCIFVWKL 712 (1080)
T ss_pred hhheeecCCceEEEEEC
Confidence 99999999999999986
No 132
>KOG2096|consensus
Probab=99.88 E-value=1e-20 Score=141.19 Aligned_cols=196 Identities=27% Similarity=0.435 Sum_probs=159.9
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECC---Cc
Q psy4393 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELS---SG 101 (247)
Q Consensus 25 ~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~---~~ 101 (247)
.|.-.|..+-....+.+|++++.|-.|.+|+.. |+.+..+......-...+.+|+|+++++++-...+++|.+- .|
T Consensus 185 kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~L~~idtnq~~n~~aavSP~GRFia~~gFTpDVkVwE~~f~kdG 263 (420)
T KOG2096|consen 185 KHQVDIINIGIAGNAKYIMSASLDTKICLWDLK-GQLLQSIDTNQSSNYDAAVSPDGRFIAVSGFTPDVKVWEPIFTKDG 263 (420)
T ss_pred hcccceEEEeecCCceEEEEecCCCcEEEEecC-CceeeeeccccccccceeeCCCCcEEEEecCCCCceEEEEEeccCc
Confidence 467788888888889999999999999999997 77777777666667778999999999999999999999862 22
Q ss_pred -----eEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCC-------eEEEee-----cCCCCCeEEEEECCC
Q psy4393 102 -----KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG-------KCLKTL-----PAHSDPVSAVHFNRD 164 (247)
Q Consensus 102 -----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~-------~~~~~~-----~~~~~~i~~~~~~~~ 164 (247)
..+..+++|.+.|...+|+++...+++.+.||.+++||..-. ..++.. .+...++ .+..+|+
T Consensus 264 ~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~-RL~lsP~ 342 (420)
T KOG2096|consen 264 TFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTDVRYEAGQDPKILKEGSAPLHAAGSEPV-RLELSPS 342 (420)
T ss_pred chhhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeeccceEecCCCchHhhcCCcchhhcCCCce-EEEeCCC
Confidence 234578899999999999999999999999999999997531 112222 1222344 6899999
Q ss_pred CCEEEEecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEE
Q psy4393 165 GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224 (247)
Q Consensus 165 ~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd 224 (247)
|+.|+.. ....+++|..++++....+..-+...|.+++|+++|+++++++ |..++++-
T Consensus 343 g~~lA~s-~gs~l~~~~se~g~~~~~~e~~h~~~Is~is~~~~g~~~atcG-dr~vrv~~ 400 (420)
T KOG2096|consen 343 GDSLAVS-FGSDLKVFASEDGKDYPELEDIHSTTISSISYSSDGKYIATCG-DRYVRVIR 400 (420)
T ss_pred CcEEEee-cCCceEEEEcccCccchhHHHhhcCceeeEEecCCCcEEeeec-ceeeeeec
Confidence 9988765 4667999999998877777777788999999999999999998 77888874
No 133
>KOG1274|consensus
Probab=99.88 E-value=1.2e-20 Score=157.42 Aligned_cols=193 Identities=22% Similarity=0.362 Sum_probs=163.3
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceEEEE
Q psy4393 27 TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKT 106 (247)
Q Consensus 27 ~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~ 106 (247)
+-++..++|+.+|+++|+|+.|-.|++-+..+......+.+|..+|.++.++|.+++|++.+.||.|++||+.++.....
T Consensus 96 tlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~~~~~~~~~t 175 (933)
T KOG1274|consen 96 TLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQDGILSKT 175 (933)
T ss_pred eccceEEEEecCCcEEEeecCceeEEEEeccccchheeecccCCceeeeeEcCCCCEEEEEecCceEEEEEcccchhhhh
Confidence 55788999999999999999999999999999988999999999999999999999999999999999999998876655
Q ss_pred EecC--------CccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecC--CCCCeEEEEECCCCCEEEEecCCCe
Q psy4393 107 LKGH--------SNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPA--HSDPVSAVHFNRDGSLIVSSSYDGL 176 (247)
Q Consensus 107 ~~~~--------~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~dg~ 176 (247)
+.+- ...+..++|+|++..++....|+.|++|+...+.....+.. +...+.++.|+|+|++||+++.+|.
T Consensus 176 l~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPnG~YiAAs~~~g~ 255 (933)
T KOG1274|consen 176 LTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPNGKYIAASTLDGQ 255 (933)
T ss_pred cccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEccCCceeheeecccccccceEEEEEcCCCcEEeeeccCCc
Confidence 5421 23355689999988888889999999999999887776643 2334889999999999999999999
Q ss_pred EEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEE
Q psy4393 177 CRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224 (247)
Q Consensus 177 i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd 224 (247)
|.|||..+.+. ......|.+++|.|+..-+-.....|...+|-
T Consensus 256 I~vWnv~t~~~-----~~~~~~Vc~~aw~p~~n~it~~~~~g~~~~~~ 298 (933)
T KOG1274|consen 256 ILVWNVDTHER-----HEFKRAVCCEAWKPNANAITLITALGTLGVSP 298 (933)
T ss_pred EEEEecccchh-----ccccceeEEEecCCCCCeeEEEeeccccccCh
Confidence 99999987221 23346789999999998887777677766664
No 134
>KOG1036|consensus
Probab=99.88 E-value=1.9e-20 Score=138.79 Aligned_cols=186 Identities=25% Similarity=0.419 Sum_probs=144.5
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceEE
Q psy4393 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCL 104 (247)
Q Consensus 25 ~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~ 104 (247)
.|..++.+++|.+ ...+++|+.||.|+.+|+.++.. ..+..|..++.++..++....+++|+.|+.|++||.+.....
T Consensus 52 ~~~~plL~c~F~d-~~~~~~G~~dg~vr~~Dln~~~~-~~igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~ 129 (323)
T KOG1036|consen 52 KHGAPLLDCAFAD-ESTIVTGGLDGQVRRYDLNTGNE-DQIGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVV 129 (323)
T ss_pred ecCCceeeeeccC-CceEEEeccCceEEEEEecCCcc-eeeccCCCceEEEEeeccCCeEEEcccCccEEEEeccccccc
Confidence 4789999999987 45678899999999999977654 455668889999999998888999999999999999864443
Q ss_pred EEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeE---------------E-----------------------
Q psy4393 105 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC---------------L----------------------- 146 (247)
Q Consensus 105 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~---------------~----------------------- 146 (247)
..+. ....|.++... ++.|+.|+.+..+.+||+++-.. +
T Consensus 130 ~~~d-~~kkVy~~~v~--g~~LvVg~~~r~v~iyDLRn~~~~~q~reS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~ 206 (323)
T KOG1036|consen 130 GTFD-QGKKVYCMDVS--GNRLVVGTSDRKVLIYDLRNLDEPFQRRESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYF 206 (323)
T ss_pred cccc-cCceEEEEecc--CCEEEEeecCceEEEEEcccccchhhhccccceeEEEEEEEecCCCceEEEeecceEEEEcc
Confidence 3333 23357666554 66788888888888888875210 1
Q ss_pred ----------EeecCCC---------CCeEEEEECCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCC
Q psy4393 147 ----------KTLPAHS---------DPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPN 207 (247)
Q Consensus 147 ----------~~~~~~~---------~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~ 207 (247)
..|+.|. .||.+|+|+|-...|++|+.||.|.+||+.+.+.+..+... ...|..++|+.+
T Consensus 207 d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~Fhp~~~tfaTgGsDG~V~~Wd~~~rKrl~q~~~~-~~SI~slsfs~d 285 (323)
T KOG1036|consen 207 DDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIAFHPIHGTFATGGSDGIVNIWDLFNRKRLKQLAKY-ETSISSLSFSMD 285 (323)
T ss_pred CCchHHhhhceeEEeeecccCCceEEEEeceeEeccccceEEecCCCceEEEccCcchhhhhhccCC-CCceEEEEeccC
Confidence 1122332 26899999999899999999999999999988766655433 456899999999
Q ss_pred CCEEEEEEc
Q psy4393 208 GKYILAATL 216 (247)
Q Consensus 208 ~~~l~~~~~ 216 (247)
|..||.++.
T Consensus 286 G~~LAia~s 294 (323)
T KOG1036|consen 286 GSLLAIASS 294 (323)
T ss_pred CCeEEEEec
Confidence 999999874
No 135
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.88 E-value=9.5e-19 Score=137.44 Aligned_cols=208 Identities=16% Similarity=0.202 Sum_probs=151.7
Q ss_pred EEecCCCCeEEEEECCCCCEE-EEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEE-cCCCeEEEEECC
Q psy4393 22 TLAGHTKAVSSVKFSPNGEWL-ASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSG-SDDKTLKIWELS 99 (247)
Q Consensus 22 ~~~~h~~~v~~~~~s~~~~~l-~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~v~d~~ 99 (247)
.+..+ ..+.+++|+|+++.+ ++++.++.+++||..+++....+..+. .+..+.|+|+++.++++ ..++.+++||+.
T Consensus 26 ~~~~~-~~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~~~~g~~l~~~~~~~~~l~~~d~~ 103 (300)
T TIGR03866 26 TFPVG-QRPRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLPSGP-DPELFALHPNGKILYIANEDDNLVTVIDIE 103 (300)
T ss_pred EEECC-CCCCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEeccCCC-CccEEEECCCCCEEEEEcCCCCeEEEEECC
Confidence 33333 346789999999976 556778999999998887766555433 35678999999977654 568999999999
Q ss_pred CceEEEEEecCCccEEEEEEcCCCCEEEEeeCCC-CEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEe-cCCCeE
Q psy4393 100 SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE-SVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSS-SYDGLC 177 (247)
Q Consensus 100 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i 177 (247)
+.+.+..+... ..+..+.|+|++..++++..++ .+.+||.++++........ .....+.|+|++.+++++ ..++.+
T Consensus 104 ~~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v 181 (300)
T TIGR03866 104 TRKVLAEIPVG-VEPEGMAVSPDGKIVVNTSETTNMAHFIDTKTYEIVDNVLVD-QRPRFAEFTADGKELWVSSEIGGTV 181 (300)
T ss_pred CCeEEeEeeCC-CCcceEEECCCCCEEEEEecCCCeEEEEeCCCCeEEEEEEcC-CCccEEEECCCCCEEEEEcCCCCEE
Confidence 88776666532 3357789999999999888765 4678899887765544332 345678999999988654 468999
Q ss_pred EEEeCCCceeeeeeccC------CCCCeEEEEECCCCCEEEEE-EcCCeEEEEECCCcceEEE
Q psy4393 178 RIWDTASGQCLKTLIDD------DNPPVSFVKFSPNGKYILAA-TLDNTLKLWDSKVVTPAII 233 (247)
Q Consensus 178 ~v~d~~~~~~~~~~~~~------~~~~v~~~~~s~~~~~l~~~-~~dg~i~vwd~~~~~~~~~ 233 (247)
.+||+.+++....+... .......++|+|++++++.+ +.++.+.+||.++.+....
T Consensus 182 ~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i~v~d~~~~~~~~~ 244 (300)
T TIGR03866 182 SVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPANRVAVVDAKTYEVLDY 244 (300)
T ss_pred EEEEcCcceeeeeeeecccccccccCCccceEECCCCCEEEEEcCCCCeEEEEECCCCcEEEE
Confidence 99999988765544211 11122458899999986554 4567899999987766543
No 136
>KOG1524|consensus
Probab=99.87 E-value=2.1e-21 Score=153.71 Aligned_cols=184 Identities=26% Similarity=0.415 Sum_probs=149.8
Q ss_pred EEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCc
Q psy4393 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSG 101 (247)
Q Consensus 22 ~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~ 101 (247)
++..|.+.|.+-.|+|||.-|+++++||.|++|.- +|.....+.....+|.+++|.|+.+.++.+. .+.+.+-.+...
T Consensus 99 sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSr-sGMLRStl~Q~~~~v~c~~W~p~S~~vl~c~-g~h~~IKpL~~n 176 (737)
T KOG1524|consen 99 SISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSR-SGMLRSTVVQNEESIRCARWAPNSNSIVFCQ-GGHISIKPLAAN 176 (737)
T ss_pred hhhhhhhhhhhcccCCCCceeeeecCCceEEEEec-cchHHHHHhhcCceeEEEEECCCCCceEEec-CCeEEEeecccc
Confidence 44579999999999999999999999999999975 4444445556677899999999887776553 345666666666
Q ss_pred eEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCCCeEEEEe
Q psy4393 102 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181 (247)
Q Consensus 102 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d 181 (247)
..+...++|++-|.++.|++..+++++|++|-..++||.. |+.+..-.+|+.+|++++|+|+ +.++.++.+ ..+
T Consensus 177 ~k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~-G~~Lf~S~~~ey~ITSva~npd-~~~~v~S~n-t~R--- 250 (737)
T KOG1524|consen 177 SKIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQ-GANLFTSAAEEYAITSVAFNPE-KDYLLWSYN-TAR--- 250 (737)
T ss_pred cceeEEeccCcEEEEeecCccccceeecCCceeEEeeccc-CcccccCChhccceeeeeeccc-cceeeeeee-eee---
Confidence 5666789999999999999999999999999999999975 6677777889999999999999 666666533 111
Q ss_pred CCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEE
Q psy4393 182 TASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 222 (247)
Q Consensus 182 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v 222 (247)
+.....+.|..++||+||..+++|+..|.+.+
T Consensus 251 ---------~~~p~~GSifnlsWS~DGTQ~a~gt~~G~v~~ 282 (737)
T KOG1524|consen 251 ---------FSSPRVGSIFNLSWSADGTQATCGTSTGQLIV 282 (737)
T ss_pred ---------ecCCCccceEEEEEcCCCceeeccccCceEEE
Confidence 34455677899999999999999999987655
No 137
>KOG0290|consensus
Probab=99.87 E-value=1.2e-20 Score=139.03 Aligned_cols=217 Identities=22% Similarity=0.375 Sum_probs=167.3
Q ss_pred cCCCCeEEEEECCCCC-----EEEEEeCCCeEEEEecCC--CeEE--E-----EEecccCCeEEEEECC-CCCEEEEEcC
Q psy4393 25 GHTKAVSSVKFSPNGE-----WLASSSADKLIKIWGAYD--GKFE--K-----TISGHKLGISDVAWSS-DSRLLVSGSD 89 (247)
Q Consensus 25 ~h~~~v~~~~~s~~~~-----~l~~~~~dg~v~iw~~~~--~~~~--~-----~~~~~~~~v~~~~~~~-~~~~l~~~~~ 89 (247)
.|..+++.+-|.|+.. +||++ +..+++|.+.. .+.. . +-..+..+++++.|+. +-++|.+.+-
T Consensus 94 d~~YP~tK~~wiPd~~g~~pdlLATs--~D~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSi 171 (364)
T KOG0290|consen 94 DHPYPVTKLMWIPDSKGVYPDLLATS--SDFLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSI 171 (364)
T ss_pred CCCCCccceEecCCccccCcchhhcc--cCeEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeecc
Confidence 5889999999999864 45554 56899998863 2211 1 1234567899999987 6678999999
Q ss_pred CCeEEEEECCCce---EEEEEecCCccEEEEEEcCCC-CEEEEeeCCCCEEEEECCCCeE---EEeecCCCCCeEEEEEC
Q psy4393 90 DKTLKIWELSSGK---CLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVRTGKC---LKTLPAHSDPVSAVHFN 162 (247)
Q Consensus 90 d~~i~v~d~~~~~---~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~v~d~~~~~~---~~~~~~~~~~i~~~~~~ 162 (247)
|-++.+||++++. ....+.+|...|..++|..++ ..+|+.+.||.+|+||+|..+. +.+-.....+...++|+
T Consensus 172 DTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswn 251 (364)
T KOG0290|consen 172 DTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWN 251 (364)
T ss_pred cCeEEEEEEeeccccceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccC
Confidence 9999999999863 345678899999999999855 5789999999999999997653 22222324577788898
Q ss_pred CCC-CEEEEecCCC-eEEEEeCCCceeeeeeccCCCCCeEEEEECCCC-CEEEEEEcCCeEEEEECCCc------ceEEE
Q psy4393 163 RDG-SLIVSSSYDG-LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG-KYILAATLDNTLKLWDSKVV------TPAII 233 (247)
Q Consensus 163 ~~~-~~l~~~~~dg-~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~vwd~~~~------~~~~~ 233 (247)
+.. +++|+-..|+ .|.+.|++........+..|.+.|+.++|.|.. ..|++++.|..+.+||+.++ +|++.
T Consensus 252 kqDpnymATf~~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~~~~~~dPila 331 (364)
T KOG0290|consen 252 KQDPNYMATFAMDSNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQMPRENGEDPILA 331 (364)
T ss_pred cCCchHHhhhhcCCceEEEEEecCCCcceehhhcCcccccceEecCCCCceeeecCCcceEEEEecccccccCCCCchhh
Confidence 754 5777766654 788999998766555566788899999999975 58889999999999998653 58888
Q ss_pred EccCCcccce
Q psy4393 234 CSTPLNLNYF 243 (247)
Q Consensus 234 ~~~~~~~~~~ 243 (247)
|....+.|++
T Consensus 332 y~a~~EVNqi 341 (364)
T KOG0290|consen 332 YTAGGEVNQI 341 (364)
T ss_pred hhccceeeee
Confidence 8888888775
No 138
>KOG4378|consensus
Probab=99.87 E-value=4.7e-21 Score=150.40 Aligned_cols=203 Identities=23% Similarity=0.331 Sum_probs=165.7
Q ss_pred EEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceEEEEEecC-C
Q psy4393 33 VKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGH-S 111 (247)
Q Consensus 33 ~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~-~ 111 (247)
++......++++|+..+.|+|||+......+.++.|...|+++.+.....+|++++..|.|.+..+.++.....++.. .
T Consensus 85 v~~~s~S~y~~sgG~~~~Vkiwdl~~kl~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f~~~sg 164 (673)
T KOG4378|consen 85 VACASQSLYEISGGQSGCVKIWDLRAKLIHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTFTIDSG 164 (673)
T ss_pred HhhhhcceeeeccCcCceeeehhhHHHHHhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCccccceecCCC
Confidence 333334478889999999999999866666678899999999999999999999999999999999998877677644 3
Q ss_pred ccEEEEEEcCCCC-EEEEeeCCCCEEEEECCCCeEEEee-cCCCCCeEEEEECCCCC-EEEEecCCCeEEEEeCCCceee
Q psy4393 112 NYVFCCNFNPQSN-LIVSGSFDESVRIWDVRTGKCLKTL-PAHSDPVSAVHFNRDGS-LIVSSSYDGLCRIWDTASGQCL 188 (247)
Q Consensus 112 ~~v~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~-~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~v~d~~~~~~~ 188 (247)
..+.-+.++|..+ +|.+++.+|.|++||.....++..+ ..|..|...++|+|... +|++.+.|..|.+||.+..+..
T Consensus 165 qsvRll~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~ 244 (673)
T KOG4378|consen 165 QSVRLLRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQAST 244 (673)
T ss_pred CeEEEeecccccceeeEeeccCCeEEEEeccCCCcccchhhhccCCcCcceecCCccceEEEecccceEEEeeccccccc
Confidence 4566889998765 4567899999999999877766654 58899999999999665 6788899999999999977665
Q ss_pred eeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCc-ceEEEEccC
Q psy4393 189 KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVV-TPAIICSTP 237 (247)
Q Consensus 189 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~-~~~~~~~~~ 237 (247)
..+... .|...++|+++|.+|++|+..|.|..||++.. .|+.++-.+
T Consensus 245 ~~l~y~--~Plstvaf~~~G~~L~aG~s~G~~i~YD~R~~k~Pv~v~sah 292 (673)
T KOG4378|consen 245 DRLTYS--HPLSTVAFSECGTYLCAGNSKGELIAYDMRSTKAPVAVRSAH 292 (673)
T ss_pred ceeeec--CCcceeeecCCceEEEeecCCceEEEEecccCCCCceEeeec
Confidence 555433 46788999999999999999999999999976 465554443
No 139
>KOG0771|consensus
Probab=99.87 E-value=7.3e-21 Score=146.35 Aligned_cols=196 Identities=22% Similarity=0.348 Sum_probs=154.2
Q ss_pred EEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceEEEEEe--
Q psy4393 31 SSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLK-- 108 (247)
Q Consensus 31 ~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-- 108 (247)
..++|+++|..|++++.||.+|+|+............|...|.++.|+|||++|++.+.| ..+||+..++..+....
T Consensus 148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t~~ 226 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKTPF 226 (398)
T ss_pred eEEEEcCCCCEeeeccccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcCCc
Confidence 578999999999999999999999976666556667788899999999999999999999 89999999986554443
Q ss_pred cCCccEEEEEEcCCC---C--EEEEeeCCCCEEEEECCCCeE-----EEeecCCCCCeEEEEECCCCCEEEEecCCCeEE
Q psy4393 109 GHSNYVFCCNFNPQS---N--LIVSGSFDESVRIWDVRTGKC-----LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCR 178 (247)
Q Consensus 109 ~~~~~v~~~~~~~~~---~--~l~~~~~d~~i~v~d~~~~~~-----~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~ 178 (247)
........|.|+.++ . +++.-...+.++.||+....- .+........|++|+.+++|++++.|+.||.|.
T Consensus 227 ~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGsVa 306 (398)
T KOG0771|consen 227 SKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDGSVA 306 (398)
T ss_pred ccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccCCcEE
Confidence 222335567787766 2 233334456677777643221 111112234799999999999999999999999
Q ss_pred EEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCC
Q psy4393 179 IWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKV 227 (247)
Q Consensus 179 v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~ 227 (247)
+++..+-+..+.....|...|+.+.|+||.++++..+.|.++.|.-+..
T Consensus 307 i~~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr~~~svSs~~~~~v~~l~v 355 (398)
T KOG0771|consen 307 IYDAKSLQRLQYVKEAHLGFVTGLTFSPDSRYLASVSSDNEAAVTKLAV 355 (398)
T ss_pred EEEeceeeeeEeehhhheeeeeeEEEcCCcCcccccccCCceeEEEEee
Confidence 9999988888777777888999999999999999999999888886543
No 140
>KOG2106|consensus
Probab=99.87 E-value=2.9e-19 Score=140.60 Aligned_cols=193 Identities=24% Similarity=0.449 Sum_probs=155.8
Q ss_pred CCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCce-----
Q psy4393 28 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGK----- 102 (247)
Q Consensus 28 ~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~----- 102 (247)
+-|.|++|.++|. +++|..+|.+.||+..+.+..+....|..+|.++....+|.++ +|++|..|..||-.-.+
T Consensus 247 k~Vl~v~F~engd-viTgDS~G~i~Iw~~~~~~~~k~~~aH~ggv~~L~~lr~Gtll-SGgKDRki~~Wd~~y~k~r~~e 324 (626)
T KOG2106|consen 247 KFVLCVTFLENGD-VITGDSGGNILIWSKGTNRISKQVHAHDGGVFSLCMLRDGTLL-SGGKDRKIILWDDNYRKLRETE 324 (626)
T ss_pred eEEEEEEEcCCCC-EEeecCCceEEEEeCCCceEEeEeeecCCceEEEEEecCccEe-ecCccceEEecccccccccccc
Confidence 6799999999998 5689999999999997777766667999999999999998755 59999999999831100
Q ss_pred ------EE-----------------------------EEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEE
Q psy4393 103 ------CL-----------------------------KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLK 147 (247)
Q Consensus 103 ------~~-----------------------------~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~ 147 (247)
.+ ....+|....+.++.+|+.+++++++.|+.+++|+ ..+...
T Consensus 325 lPe~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~gh~delwgla~hps~~q~~T~gqdk~v~lW~--~~k~~w 402 (626)
T KOG2106|consen 325 LPEQFGPIRTVAEGKGDILVGTTRNFILQGTLENGFTLTVQGHGDELWGLATHPSKNQLLTCGQDKHVRLWN--DHKLEW 402 (626)
T ss_pred CchhcCCeeEEecCCCcEEEeeccceEEEeeecCCceEEEEecccceeeEEcCCChhheeeccCcceEEEcc--CCceeE
Confidence 00 11234556677888899999999999999999999 444444
Q ss_pred eecCCCCCeEEEEECCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCC
Q psy4393 148 TLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKV 227 (247)
Q Consensus 148 ~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~ 227 (247)
... -..++.|+.|+|.| .+|.|...|...+.|.++...+.... . +.++++++|+|+|.+||.|+.|+.|.||-...
T Consensus 403 t~~-~~d~~~~~~fhpsg-~va~Gt~~G~w~V~d~e~~~lv~~~~-d-~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~ 478 (626)
T KOG2106|consen 403 TKI-IEDPAECADFHPSG-VVAVGTATGRWFVLDTETQDLVTIHT-D-NEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSA 478 (626)
T ss_pred EEE-ecCceeEeeccCcc-eEEEeeccceEEEEecccceeEEEEe-c-CCceEEEEEcCCCCEEEEecCCCeEEEEEECC
Confidence 433 25688999999999 89999999999999999865544332 2 77899999999999999999999999998765
Q ss_pred c
Q psy4393 228 V 228 (247)
Q Consensus 228 ~ 228 (247)
.
T Consensus 479 ~ 479 (626)
T KOG2106|consen 479 N 479 (626)
T ss_pred C
Confidence 4
No 141
>KOG2106|consensus
Probab=99.86 E-value=4.6e-19 Score=139.48 Aligned_cols=197 Identities=19% Similarity=0.343 Sum_probs=156.6
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCe----------------------------------------EEEE
Q psy4393 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK----------------------------------------FEKT 64 (247)
Q Consensus 25 ~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~----------------------------------------~~~~ 64 (247)
.|.+.|.+++...+|.+|- |++|..|..||..-.+ ....
T Consensus 285 aH~ggv~~L~~lr~GtllS-GgKDRki~~Wd~~y~k~r~~elPe~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f~~~ 363 (626)
T KOG2106|consen 285 AHDGGVFSLCMLRDGTLLS-GGKDRKIILWDDNYRKLRETELPEQFGPIRTVAEGKGDILVGTTRNFILQGTLENGFTLT 363 (626)
T ss_pred ecCCceEEEEEecCccEee-cCccceEEeccccccccccccCchhcCCeeEEecCCCcEEEeeccceEEEeeecCCceEE
Confidence 8999999999999998765 9999999999832110 0012
Q ss_pred EecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCe
Q psy4393 65 ISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK 144 (247)
Q Consensus 65 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~ 144 (247)
..+|......++.+|+.+++++++.|+.+++|+ ..+...... ...+..|+.|+|.| .+|.|...|..-+.|.++..
T Consensus 364 v~gh~delwgla~hps~~q~~T~gqdk~v~lW~--~~k~~wt~~-~~d~~~~~~fhpsg-~va~Gt~~G~w~V~d~e~~~ 439 (626)
T KOG2106|consen 364 VQGHGDELWGLATHPSKNQLLTCGQDKHVRLWN--DHKLEWTKI-IEDPAECADFHPSG-VVAVGTATGRWFVLDTETQD 439 (626)
T ss_pred EEecccceeeEEcCCChhheeeccCcceEEEcc--CCceeEEEE-ecCceeEeeccCcc-eEEEeeccceEEEEecccce
Confidence 234666777889999999999999999999999 233332222 34568899999999 99999999999999999866
Q ss_pred EEEeecCCCCCeEEEEECCCCCEEEEecCCCeEEEEeCCCceeeeee-ccCCCCCeEEEEECCCCCEEEEEEcCCeEEEE
Q psy4393 145 CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL-IDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 223 (247)
Q Consensus 145 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw 223 (247)
.+..-.. ..++++|+|+|+|.+||+|+.|+.|++|.+......... ......+|+.+.|++|+++|.+.+.|-.|..|
T Consensus 440 lv~~~~d-~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y~r~~k~~gs~ithLDwS~Ds~~~~~~S~d~eiLyW 518 (626)
T KOG2106|consen 440 LVTIHTD-NEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGRKYSRVGKCSGSPITHLDWSSDSQFLVSNSGDYEILYW 518 (626)
T ss_pred eEEEEec-CCceEEEEEcCCCCEEEEecCCCeEEEEEECCCCcEEEEeeeecCceeEEeeecCCCceEEeccCceEEEEE
Confidence 6555444 889999999999999999999999999988765433322 22334889999999999999999999999999
Q ss_pred ECCC
Q psy4393 224 DSKV 227 (247)
Q Consensus 224 d~~~ 227 (247)
....
T Consensus 519 ~~~~ 522 (626)
T KOG2106|consen 519 KPSE 522 (626)
T ss_pred cccc
Confidence 5443
No 142
>KOG4283|consensus
Probab=99.86 E-value=1.5e-19 Score=133.73 Aligned_cols=161 Identities=28% Similarity=0.520 Sum_probs=134.9
Q ss_pred cCCCCeEEEEECC-CCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCC---CCEEEEEcCCCeEEEEECCC
Q psy4393 25 GHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD---SRLLVSGSDDKTLKIWELSS 100 (247)
Q Consensus 25 ~h~~~v~~~~~s~-~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~v~d~~~ 100 (247)
+|...|.++.|-| |.-.+.+++-|.++++||..+.+....+. -+..|.+-+|+|- ..+|++|..+-.|++.|+..
T Consensus 99 ~Hky~iss~~WyP~DtGmFtssSFDhtlKVWDtnTlQ~a~~F~-me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~S 177 (397)
T KOG4283|consen 99 GHKYAISSAIWYPIDTGMFTSSSFDHTLKVWDTNTLQEAVDFK-MEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIAS 177 (397)
T ss_pred cceeeeeeeEEeeecCceeecccccceEEEeecccceeeEEee-cCceeehhhcChhhhcceEEEEecCCCcEEEEeccC
Confidence 6889999999999 45567778899999999998776655554 3556888888883 56788999999999999999
Q ss_pred ceEEEEEecCCccEEEEEEcCCCCE-EEEeeCCCCEEEEECCCC-eEEE--------------eecCCCCCeEEEEECCC
Q psy4393 101 GKCLKTLKGHSNYVFCCNFNPQSNL-IVSGSFDESVRIWDVRTG-KCLK--------------TLPAHSDPVSAVHFNRD 164 (247)
Q Consensus 101 ~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~v~d~~~~-~~~~--------------~~~~~~~~i~~~~~~~~ 164 (247)
|.+.+.+.+|.+.|.++.|+|...+ +++|+.||.+++||++.. .+.. .-.+|.+.+..++|+.+
T Consensus 178 Gs~sH~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd 257 (397)
T KOG4283|consen 178 GSFSHTLSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSD 257 (397)
T ss_pred CcceeeeccccCceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeeccc
Confidence 9999999999999999999997765 688999999999999853 2222 22456778999999999
Q ss_pred CCEEEEecCCCeEEEEeCCCce
Q psy4393 165 GSLIVSSSYDGLCRIWDTASGQ 186 (247)
Q Consensus 165 ~~~l~~~~~dg~i~v~d~~~~~ 186 (247)
+.++++++.|..+++|+..+|+
T Consensus 258 ~~~l~~~gtd~r~r~wn~~~G~ 279 (397)
T KOG4283|consen 258 ARYLASCGTDDRIRVWNMESGR 279 (397)
T ss_pred chhhhhccCccceEEeecccCc
Confidence 9999999999999999998775
No 143
>KOG0642|consensus
Probab=99.86 E-value=4.1e-20 Score=146.90 Aligned_cols=222 Identities=23% Similarity=0.402 Sum_probs=179.6
Q ss_pred CCceEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCC--------CeEEEEEecccCCeEEEEECCCCCEEEE
Q psy4393 15 PNYVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD--------GKFEKTISGHKLGISDVAWSSDSRLLVS 86 (247)
Q Consensus 15 ~~~~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~--------~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 86 (247)
..|..++++..|...|+.++|.|....|++|+.||.+.+|+++. -+....+.+|.++|.+++..+++..+++
T Consensus 282 k~w~ik~tl~s~~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ys 361 (577)
T KOG0642|consen 282 KKWNIKFTLRSHDDCIRALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYS 361 (577)
T ss_pred eecceeeeeecchhhhhhhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEe
Confidence 34778889999999999999999999999999999999999832 1345578899999999999999999999
Q ss_pred EcCCCeEEEEECCCc----------eEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEee-------
Q psy4393 87 GSDDKTLKIWELSSG----------KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTL------- 149 (247)
Q Consensus 87 ~~~d~~i~v~d~~~~----------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~------- 149 (247)
|+.||.|+.|++... .....+.+|.+.++.+.+++....|++++.||++++|+.....+ ..+
T Consensus 362 gg~Dg~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~-~~f~~~~e~g 440 (577)
T KOG0642|consen 362 GGIDGTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEESP-CTFGEPKEHG 440 (577)
T ss_pred eccCceeeeeccCCCCCcccccCcchhccceeccccceeeeeecccccceeeecCCceEEeeccCCcCc-cccCCccccC
Confidence 999999999965421 12345778999999999999999999999999999998754332 000
Q ss_pred --------------------------------------c--CCC-----CCeEEEEECCCCCEEEEecCCCeEEEEeCCC
Q psy4393 150 --------------------------------------P--AHS-----DPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 184 (247)
Q Consensus 150 --------------------------------------~--~~~-----~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~ 184 (247)
. +.. ..+..+.++|...+.+++..|+.|+++|..+
T Consensus 441 ~Plsvd~~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~~~hed~~Ir~~dn~~ 520 (577)
T KOG0642|consen 441 YPLSVDRTSSRPAHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTADITFTAHEDRSIRFFDNKT 520 (577)
T ss_pred CcceEeeccchhHhhhhhcccccccchhhhhhhheeeccccCCCcccccCccceEEecCCCCeeEecccCCceecccccc
Confidence 0 000 1245567788888999999999999999999
Q ss_pred ceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcceEEEEccCC
Q psy4393 185 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTPL 238 (247)
Q Consensus 185 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~ 238 (247)
++.+.... .+...++++++.|+|.+|++++.||++++|....+.....+..+.
T Consensus 521 ~~~l~s~~-a~~~svtslai~~ng~~l~s~s~d~sv~l~kld~k~~~~es~~~r 573 (577)
T KOG0642|consen 521 GKILHSMV-AHKDSVTSLAIDPNGPYLMSGSHDGSVRLWKLDVKTCVLESTAHR 573 (577)
T ss_pred cccchhee-eccceecceeecCCCceEEeecCCceeehhhccchheeecccccc
Confidence 88776543 334568999999999999999999999999988877766555443
No 144
>KOG1063|consensus
Probab=99.86 E-value=3e-20 Score=150.86 Aligned_cols=210 Identities=22% Similarity=0.414 Sum_probs=164.6
Q ss_pred ceEEEEEecCCCCeEEEEECCCCCEEEEEeCCC-----eEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCC
Q psy4393 17 YVLKFTLAGHTKAVSSVKFSPNGEWLASSSADK-----LIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDK 91 (247)
Q Consensus 17 ~~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg-----~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 91 (247)
|.....+.||...|++++.+|+|+++|++++.. .|++|+..+......+.+|.-.|+.++|+|||++|++++.|.
T Consensus 515 wPEv~KLYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~HsLTVT~l~FSpdg~~LLsvsRDR 594 (764)
T KOG1063|consen 515 WPEVHKLYGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQELEGHSLTVTRLAFSPDGRYLLSVSRDR 594 (764)
T ss_pred chhhHHhccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhheecccceEEEEEEECCCCcEEEEeecCc
Confidence 455567789999999999999999999987643 589999888777778999999999999999999999999999
Q ss_pred eEEEEECCCce----EEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCC--eEEEe--ecCCCCCeEEEEECC
Q psy4393 92 TLKIWELSSGK----CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG--KCLKT--LPAHSDPVSAVHFNR 163 (247)
Q Consensus 92 ~i~v~d~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~--~~~~~--~~~~~~~i~~~~~~~ 163 (247)
++.+|...... .....+.|..-|+.++|+|++.+++|++.|..+++|..... +.+.. ...+..+++++++.|
T Consensus 595 t~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~~~~~d~~i~~~a~~~~~~aVTAv~~~~ 674 (764)
T KOG1063|consen 595 TVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVWEEPDLRDKYISRFACLKFSLAVTAVAYLP 674 (764)
T ss_pred eEEeeeeecccchhhhhccccccceEEEEcccCcccceeEEecCCceEEEEeccCchhhhhhhhchhccCCceeeEEeec
Confidence 99999875432 22346788888999999999999999999999999998876 44433 234577899999876
Q ss_pred C-----CCEEEEecCCCeEEEEeCCCcee--------eeeec---cCCCCCeEEEEECCC--------C--CEEEEEEcC
Q psy4393 164 D-----GSLIVSSSYDGLCRIWDTASGQC--------LKTLI---DDDNPPVSFVKFSPN--------G--KYILAATLD 217 (247)
Q Consensus 164 ~-----~~~l~~~~~dg~i~v~d~~~~~~--------~~~~~---~~~~~~v~~~~~s~~--------~--~~l~~~~~d 217 (247)
- +..+++|-+.|.|.+|....... +.... ..+...|+.+.|.|. . ..|+.|+.|
T Consensus 675 ~~~~e~~~~vavGle~GeI~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~aV~rl~w~p~~~~~~~~~~~~l~la~~g~D 754 (764)
T KOG1063|consen 675 VDHNEKGDVVAVGLEKGEIVLWRRKREHRQVTVGTFNLDTRLCATIGPDSAVNRLLWRPTCSDDWVEDKEWLNLAVGGDD 754 (764)
T ss_pred cccccccceEEEEecccEEEEEecccccccccceeeeeccccccccChHHhhheeEeccccccccccccceeEEeeeccc
Confidence 2 33778899999999998541110 00011 122346788999875 2 356999999
Q ss_pred CeEEEEECC
Q psy4393 218 NTLKLWDSK 226 (247)
Q Consensus 218 g~i~vwd~~ 226 (247)
..+++++.+
T Consensus 755 ~~vri~nv~ 763 (764)
T KOG1063|consen 755 ESVRIFNVD 763 (764)
T ss_pred ceeEEeecc
Confidence 999999764
No 145
>KOG0270|consensus
Probab=99.86 E-value=4.3e-20 Score=142.95 Aligned_cols=193 Identities=25% Similarity=0.426 Sum_probs=150.5
Q ss_pred CCEEEEEeCCCeEEEEecCCCe--EE-------------------EEEecccCCeEEEEECCC-CCEEEEEcCCCeEEEE
Q psy4393 39 GEWLASSSADKLIKIWGAYDGK--FE-------------------KTISGHKLGISDVAWSSD-SRLLVSGSDDKTLKIW 96 (247)
Q Consensus 39 ~~~l~~~~~dg~v~iw~~~~~~--~~-------------------~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~v~ 96 (247)
|+++|.|+.+-.|.|||+.-.. .. ....+|...|.+++|+.. .+.|++|+.|.+|.+|
T Consensus 192 gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~lW 271 (463)
T KOG0270|consen 192 GNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNFRNVLASGSADKTVKLW 271 (463)
T ss_pred cceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhccccceeEEecCCCceEEEE
Confidence 5799999999999999974110 00 012246667778888764 4578999999999999
Q ss_pred ECCCceEEEEEecCCccEEEEEEcCC-CCEEEEeeCCCCEEEEECCCCeE-EEeecCCCCCeEEEEECCCCC-EEEEecC
Q psy4393 97 ELSSGKCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVRTGKC-LKTLPAHSDPVSAVHFNRDGS-LIVSSSY 173 (247)
Q Consensus 97 d~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~v~d~~~~~~-~~~~~~~~~~i~~~~~~~~~~-~l~~~~~ 173 (247)
|+.++++...+..|...|.++.|+|. ...+++|+.|+++.+.|+|.... -..++. .+.|..++|+|... .+++++.
T Consensus 272 D~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk~-~g~VEkv~w~~~se~~f~~~td 350 (463)
T KOG0270|consen 272 DVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWKF-DGEVEKVAWDPHSENSFFVSTD 350 (463)
T ss_pred EcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCceEEe-ccceEEEEecCCCceeEEEecC
Confidence 99999999999989999999999985 57889999999999999995322 222332 46788999999765 5677788
Q ss_pred CCeEEEEeCCCc-eeeeeeccCCCCCeEEEEECCCCC-EEEEEEcCCeEEEEECCCcceEEE
Q psy4393 174 DGLCRIWDTASG-QCLKTLIDDDNPPVSFVKFSPNGK-YILAATLDNTLKLWDSKVVTPAII 233 (247)
Q Consensus 174 dg~i~v~d~~~~-~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~vwd~~~~~~~~~ 233 (247)
||.++-+|+|.. +++.++ ..|..+|.++++++.-. +|++++.|+.+++|+.....|..+
T Consensus 351 dG~v~~~D~R~~~~~vwt~-~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~~~~v 411 (463)
T KOG0270|consen 351 DGTVYYFDIRNPGKPVWTL-KAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDVDSPKSV 411 (463)
T ss_pred CceEEeeecCCCCCceeEE-EeccCCcceEEecCCCCcceeeccccceEEEEeecCCCCccc
Confidence 999999999986 444443 35567899999998754 677889999999999887776444
No 146
>KOG2055|consensus
Probab=99.85 E-value=8.3e-20 Score=142.07 Aligned_cols=198 Identities=19% Similarity=0.310 Sum_probs=158.5
Q ss_pred CCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceEEEEE
Q psy4393 28 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTL 107 (247)
Q Consensus 28 ~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~ 107 (247)
..+.....+|++++|+..+..|.|.+....+++....++. .+.|.++.|+.+++.|++.+.+|.|.+||+++..+++.+
T Consensus 304 ~~~e~FeVShd~~fia~~G~~G~I~lLhakT~eli~s~Ki-eG~v~~~~fsSdsk~l~~~~~~GeV~v~nl~~~~~~~rf 382 (514)
T KOG2055|consen 304 KSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKELITSFKI-EGVVSDFTFSSDSKELLASGGTGEVYVWNLRQNSCLHRF 382 (514)
T ss_pred chhheeEecCCCCeEEEcccCceEEeehhhhhhhhheeee-ccEEeeEEEecCCcEEEEEcCCceEEEEecCCcceEEEE
Confidence 4566788899999999999999999999888887777664 556999999999999999999999999999998888877
Q ss_pred ecCCc-cEEEEEEcCCCCEEEEeeCCCCEEEEECCC------CeEEEeecCCCCCeEEEEECCCCCEEEEecC--CCeEE
Q psy4393 108 KGHSN-YVFCCNFNPQSNLIVSGSFDESVRIWDVRT------GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY--DGLCR 178 (247)
Q Consensus 108 ~~~~~-~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--dg~i~ 178 (247)
....+ .-..++.++++.++|+|+..|.|.|||..+ .++++.+..-...|++|+|+++.++||.++. +..++
T Consensus 383 ~D~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~s~~PkPik~~dNLtt~Itsl~Fn~d~qiLAiaS~~~knalr 462 (514)
T KOG2055|consen 383 VDDGSVHGTSLCISLNGSYLATGSDSGIVNIYDGNSCFASTNPKPIKTVDNLTTAITSLQFNHDAQILAIASRVKKNALR 462 (514)
T ss_pred eecCccceeeeeecCCCceEEeccCcceEEEeccchhhccCCCCchhhhhhhheeeeeeeeCcchhhhhhhhhccccceE
Confidence 64322 124567778999999999999999999653 3344444444567999999999999988775 56788
Q ss_pred EEeCCCceeeeeeccC--CCCCeEEEEECCCCCEEEEEEcCCeEEEEECC
Q psy4393 179 IWDTASGQCLKTLIDD--DNPPVSFVKFSPNGKYILAATLDNTLKLWDSK 226 (247)
Q Consensus 179 v~d~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~ 226 (247)
+..+.+-.....+... .-..+++++|+|.+.+||.|..+|++.+|.+.
T Consensus 463 LVHvPS~TVFsNfP~~n~~vg~vtc~aFSP~sG~lAvGNe~grv~l~kL~ 512 (514)
T KOG2055|consen 463 LVHVPSCTVFSNFPTSNTKVGHVTCMAFSPNSGYLAVGNEAGRVHLFKLH 512 (514)
T ss_pred EEeccceeeeccCCCCCCcccceEEEEecCCCceEEeecCCCceeeEeec
Confidence 8887765544333222 23568999999999999999999999999753
No 147
>KOG0294|consensus
Probab=99.85 E-value=3.1e-19 Score=132.93 Aligned_cols=123 Identities=30% Similarity=0.474 Sum_probs=111.9
Q ss_pred EEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceEEEEEecCCccEEEEEEcCCCC--EEEEeeCCCCEEEEECC
Q psy4393 64 TISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSN--LIVSGSFDESVRIWDVR 141 (247)
Q Consensus 64 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~d~~i~v~d~~ 141 (247)
.+..|..++++++.+ +.++++|+.|-+|++||+++......+-.|.+.|.++.|.+... .|++|+.||.|.+|+..
T Consensus 38 ~~~aH~~sitavAVs--~~~~aSGssDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~ 115 (362)
T KOG0294|consen 38 AFSAHAGSITALAVS--GPYVASGSSDETIHIYDMRKRKQLGILLSHAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVG 115 (362)
T ss_pred cccccccceeEEEec--ceeEeccCCCCcEEEEeccchhhhcceeccccceEEEEecCCcchhheeeecCCCcEEEEEcC
Confidence 356788899999875 78999999999999999998888888888999999999998765 89999999999999999
Q ss_pred CCeEEEeecCCCCCeEEEEECCCCCEEEEecCCCeEEEEeCCCceee
Q psy4393 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCL 188 (247)
Q Consensus 142 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~ 188 (247)
....+..+++|.+.|+.++++|.+++-++.+.|+.+++||+-.++.-
T Consensus 116 ~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a 162 (362)
T KOG0294|consen 116 SWELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVA 162 (362)
T ss_pred CeEEeeeecccccccceeEecCCCceEEEEcCCceeeeehhhcCccc
Confidence 99999999999999999999999999999999999999999877643
No 148
>KOG0307|consensus
Probab=99.85 E-value=8.7e-21 Score=161.46 Aligned_cols=213 Identities=19% Similarity=0.333 Sum_probs=164.6
Q ss_pred CCCeEEEEECCCCCE----EEEEeCCCeEEEEecCC---C---eEEEEEecccCCeEEEEECCCC-CEEEEEcCCCeEEE
Q psy4393 27 TKAVSSVKFSPNGEW----LASSSADKLIKIWGAYD---G---KFEKTISGHKLGISDVAWSSDS-RLLVSGSDDKTLKI 95 (247)
Q Consensus 27 ~~~v~~~~~s~~~~~----l~~~~~dg~v~iw~~~~---~---~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~v 95 (247)
..+...++|.+.|.. ||.|..||.|.+|+... + ..+.....|.+.|..+.|++.. +.+++|+.+|.|.|
T Consensus 64 ~~rF~kL~W~~~g~~~~GlIaGG~edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~i 143 (1049)
T KOG0307|consen 64 SNRFNKLAWGSYGSHSHGLIAGGLEDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEILI 143 (1049)
T ss_pred cccceeeeecccCCCccceeeccccCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcEEE
Confidence 356789999998776 88889999999999754 1 2234456789999999999964 58999999999999
Q ss_pred EECCCceEEEEE--ecCCccEEEEEEcCC-CCEEEEeeCCCCEEEEECCCCeEEEeecCCCC--CeEEEEECCCCC-EEE
Q psy4393 96 WELSSGKCLKTL--KGHSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVRTGKCLKTLPAHSD--PVSAVHFNRDGS-LIV 169 (247)
Q Consensus 96 ~d~~~~~~~~~~--~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~--~i~~~~~~~~~~-~l~ 169 (247)
||+.+-+.-... ....+.|.+++|+.. ...|++++.+|...+||+|..+.+-.+..+.+ .+..+.|+|+.. .++
T Consensus 144 WDlnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~aTql~ 223 (1049)
T KOG0307|consen 144 WDLNKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQLL 223 (1049)
T ss_pred eccCCcCCCCCCCCCCCcccceEeccchhhhHHhhccCCCCCceeccccCCCcccccccCCCccceeeeeeCCCCceeee
Confidence 999874322222 123467899999874 45678889999999999998877776665543 467899999864 556
Q ss_pred EecCCC---eEEEEeCCCceeeeeeccCCCCCeEEEEECCCC-CEEEEEEcCCeEEEEECCCcceEEEEccCCc
Q psy4393 170 SSSYDG---LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG-KYILAATLDNTLKLWDSKVVTPAIICSTPLN 239 (247)
Q Consensus 170 ~~~~dg---~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~ 239 (247)
+++.|. .|.+||+|...........|...|.++.|++.+ ++|++++.|++|.+|+.++++.+-.+.+..+
T Consensus 224 ~As~dd~~PviqlWDlR~assP~k~~~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEvl~~~p~~~n 297 (1049)
T KOG0307|consen 224 VASGDDSAPVIQLWDLRFASSPLKILEGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEVLGELPAQGN 297 (1049)
T ss_pred eecCCCCCceeEeecccccCCchhhhcccccceeeeccCCCCchhhhcccCCCCeeEecCCCceEeeecCCCCc
Confidence 665543 699999987654434446677889999999977 7889999999999999999888776666444
No 149
>KOG0650|consensus
Probab=99.85 E-value=1.5e-19 Score=144.81 Aligned_cols=206 Identities=24% Similarity=0.381 Sum_probs=154.7
Q ss_pred EEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCE--EEEEcCCC------
Q psy4393 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRL--LVSGSDDK------ 91 (247)
Q Consensus 20 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--l~~~~~d~------ 91 (247)
.+.+.+|++.|.++...|.|.+|++|+.||+|+||.+.++.++..+.- ...|.+++|+|.+.. |+++-...
T Consensus 393 ~lvyrGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~~-d~~I~~vaw~P~~~~~vLAvA~~~~~~ivnp 471 (733)
T KOG0650|consen 393 ALVYRGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQF-DSEIRSVAWNPLSDLCVLAVAVGECVLIVNP 471 (733)
T ss_pred eeeEeccCCeEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEee-cceeEEEEecCCCCceeEEEEecCceEEeCc
Confidence 344579999999999999999999999999999999999998877653 446888888886542 33332211
Q ss_pred --------------------------eEEEEECC----------------------------------------------
Q psy4393 92 --------------------------TLKIWELS---------------------------------------------- 99 (247)
Q Consensus 92 --------------------------~i~v~d~~---------------------------------------------- 99 (247)
.+..|.-.
T Consensus 472 ~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~~~VliH 551 (733)
T KOG0650|consen 472 IFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDSGNKSVLIH 551 (733)
T ss_pred cccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEeccCCCcceEEEE
Confidence 12233311
Q ss_pred ---CceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCCCe
Q psy4393 100 ---SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGL 176 (247)
Q Consensus 100 ---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~ 176 (247)
.......++-..+.+.++.|+|...+|+.++ ...|++||+.....++.+......|..|+++|.|..|+.++.|+.
T Consensus 552 QLSK~~sQ~PF~kskG~vq~v~FHPs~p~lfVaT-q~~vRiYdL~kqelvKkL~tg~kwiS~msihp~GDnli~gs~d~k 630 (733)
T KOG0650|consen 552 QLSKRKSQSPFRKSKGLVQRVKFHPSKPYLFVAT-QRSVRIYDLSKQELVKKLLTGSKWISSMSIHPNGDNLILGSYDKK 630 (733)
T ss_pred ecccccccCchhhcCCceeEEEecCCCceEEEEe-ccceEEEehhHHHHHHHHhcCCeeeeeeeecCCCCeEEEecCCCe
Confidence 1111111112234577889999888888776 468999999887777777777778999999999999999999999
Q ss_pred EEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCC
Q psy4393 177 CRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKV 227 (247)
Q Consensus 177 i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~ 227 (247)
+..||+.-..........+...++.++|++.-.++++|+.||++.||-...
T Consensus 631 ~~WfDldlsskPyk~lr~H~~avr~Va~H~ryPLfas~sdDgtv~Vfhg~V 681 (733)
T KOG0650|consen 631 MCWFDLDLSSKPYKTLRLHEKAVRSVAFHKRYPLFASGSDDGTVIVFHGMV 681 (733)
T ss_pred eEEEEcccCcchhHHhhhhhhhhhhhhhccccceeeeecCCCcEEEEeeee
Confidence 999999865433333445566789999999999999999999999987653
No 150
>KOG1034|consensus
Probab=99.85 E-value=6e-19 Score=132.13 Aligned_cols=202 Identities=21% Similarity=0.440 Sum_probs=159.3
Q ss_pred cCCCCeEEEEECCC----CCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCC-CEEEEEcCCCeEEEEECC
Q psy4393 25 GHTKAVSSVKFSPN----GEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS-RLLVSGSDDKTLKIWELS 99 (247)
Q Consensus 25 ~h~~~v~~~~~s~~----~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~v~d~~ 99 (247)
.|.+....++|+-+ ..++|+++.-|.|+|.|...++....+.+|...|+.+.++|+. +++++++.|..|++|+++
T Consensus 87 d~~Esfytcsw~yd~~~~~p~la~~G~~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~ 166 (385)
T KOG1034|consen 87 DHDESFYTCSWSYDSNTGNPFLAAGGYLGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQ 166 (385)
T ss_pred CCCcceEEEEEEecCCCCCeeEEeecceeEEEEEecchhhhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEecc
Confidence 36677778888654 3478888999999999999999999999999999999999975 688999999999999999
Q ss_pred CceEEEEEe---cCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeE-------------------------EEee--
Q psy4393 100 SGKCLKTLK---GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC-------------------------LKTL-- 149 (247)
Q Consensus 100 ~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~-------------------------~~~~-- 149 (247)
+..++..+. +|.+.|.++.|++++..+++++.|-.+++|++...+. ...+
T Consensus 167 ~~~Cv~VfGG~egHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst 246 (385)
T KOG1034|consen 167 TDVCVAVFGGVEGHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDFST 246 (385)
T ss_pred CCeEEEEecccccccCcEEEEEEcCCCCeeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCccccccccccc
Confidence 999988764 6888999999999999999999999999999873110 0000
Q ss_pred -cCCCC------------------------------------------------------CeEE--EEECCCCCEEEEec
Q psy4393 150 -PAHSD------------------------------------------------------PVSA--VHFNRDGSLIVSSS 172 (247)
Q Consensus 150 -~~~~~------------------------------------------------------~i~~--~~~~~~~~~l~~~~ 172 (247)
..|.. .+.- .+++|-++.||.|.
T Consensus 247 ~diHrnyVDCvrw~gd~ilSkscenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~~~~~la~gn 326 (385)
T KOG1034|consen 247 TDIHRNYVDCVRWFGDFILSKSCENAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFAFDPWQKMLALGN 326 (385)
T ss_pred cccccchHHHHHHHhhheeecccCceEEEEecchhhhhhhccCCCccceeeeeEeccCccceEEEEEeecHHHHHHhhcc
Confidence 00100 1111 23455567789999
Q ss_pred CCCeEEEEeCCCceeee--ee-ccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECC
Q psy4393 173 YDGLCRIWDTASGQCLK--TL-IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSK 226 (247)
Q Consensus 173 ~dg~i~v~d~~~~~~~~--~~-~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~ 226 (247)
..|.+.+||++..+... ++ .......|...+|+.||..|+....|++|.-||..
T Consensus 327 q~g~v~vwdL~~~ep~~~ttl~~s~~~~tVRQ~sfS~dgs~lv~vcdd~~Vwrwdrv 383 (385)
T KOG1034|consen 327 QSGKVYVWDLDNNEPPKCTTLTHSKSGSTVRQTSFSRDGSILVLVCDDGTVWRWDRV 383 (385)
T ss_pred CCCcEEEEECCCCCCccCceEEeccccceeeeeeecccCcEEEEEeCCCcEEEEEee
Confidence 99999999999866521 11 12335678899999999999999999999999854
No 151
>KOG1408|consensus
Probab=99.84 E-value=1.9e-19 Score=147.17 Aligned_cols=199 Identities=21% Similarity=0.340 Sum_probs=155.5
Q ss_pred EEEEeCCCeEEEEecCCCe---EE----------E------------------------EEecccCCeEEEEECCCCCEE
Q psy4393 42 LASSSADKLIKIWGAYDGK---FE----------K------------------------TISGHKLGISDVAWSSDSRLL 84 (247)
Q Consensus 42 l~~~~~dg~v~iw~~~~~~---~~----------~------------------------~~~~~~~~v~~~~~~~~~~~l 84 (247)
+.+|+.|++|++|+..... .. . ..-....++.+++.+|+|++|
T Consensus 395 F~TCSsD~TIRlW~l~~ctnn~vyrRNils~~l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~~~vSp~gqhL 474 (1080)
T KOG1408|consen 395 FTTCSSDGTIRLWDLAFCTNNQVYRRNILSANLSKIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGFRALAVSPDGQHL 474 (1080)
T ss_pred eeEecCCCcEEEeecccccccceeecccchhhhhcCccccCchhhhhhccCCcccccchhhcCcccceEEEEECCCccee
Confidence 7789999999999975411 00 0 001134578999999999999
Q ss_pred EEEcCCCeEEEEECCCceEEEEEecCCccEEEEEEcC---CCCEEEEeeCCCCEEEEECCCCe-EEEeecCC--------
Q psy4393 85 VSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNP---QSNLIVSGSFDESVRIWDVRTGK-CLKTLPAH-------- 152 (247)
Q Consensus 85 ~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~i~v~d~~~~~-~~~~~~~~-------- 152 (247)
++|..-|.+++|++...+....+.+|.+.|.|+.++. ..++||+++.|+.|++||....- .+..+..|
T Consensus 475 AsGDr~GnlrVy~Lq~l~~~~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rny~l~qtld~HSssITsvK 554 (1080)
T KOG1408|consen 475 ASGDRGGNLRVYDLQELEYTCFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRNYDLVQTLDGHSSSITSVK 554 (1080)
T ss_pred cccCccCceEEEEehhhhhhhheecccceeEEEeecCchhhhHhhhhccCCceEEEEecccccchhhhhcccccceeEEE
Confidence 9999999999999998888888999999999999975 45789999999999999985311 11111111
Q ss_pred -----------------------------------------CCCeEEEEECCCCCEEEEecCCCeEEEEeCCCceeeeee
Q psy4393 153 -----------------------------------------SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 191 (247)
Q Consensus 153 -----------------------------------------~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~ 191 (247)
...+..|+..|+.+++++++.|..|+|||+.+++..+.+
T Consensus 555 Fa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQDrnirif~i~sgKq~k~F 634 (1080)
T KOG1408|consen 555 FACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVCQDRNIRIFDIESGKQVKSF 634 (1080)
T ss_pred EeecCCceEEEeccCchhhheehhccccCceeccccccccccceEEEeeeCCCcceEEEEecccceEEEeccccceeeee
Confidence 123567888888899999999999999999999988877
Q ss_pred ccC--CCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcceEEEEccCCcc
Q psy4393 192 IDD--DNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTPLNL 240 (247)
Q Consensus 192 ~~~--~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~ 240 (247)
... +.+....+..+|.|-||++...|.++.++|...++..-.-.++++.
T Consensus 635 Kgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEcvA~m~GHsE~ 685 (1080)
T KOG1408|consen 635 KGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGECVAQMTGHSEA 685 (1080)
T ss_pred cccccCCCceEEEEECCCccEEEEeecCCceEEEEeccchhhhhhcCcchh
Confidence 543 3345556889999999999999999999999888776655555553
No 152
>KOG1273|consensus
Probab=99.84 E-value=2.9e-19 Score=133.28 Aligned_cols=156 Identities=17% Similarity=0.342 Sum_probs=132.5
Q ss_pred eEEEEECCCCCEEEEEcCCCeEEEEECCCceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecC
Q psy4393 72 ISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPA 151 (247)
Q Consensus 72 v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~ 151 (247)
..++.|++-|.++++|+.||.+.+||+.+....+.+.+|.-+|.+++|+++|.++++++.|..+.+||+..|.+++.+.-
T Consensus 26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~rirf 105 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRIRF 105 (405)
T ss_pred cceEEeccCcceeeeeccCCcEEEEEccccchhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEEEc
Confidence 67899999999999999999999999999888888899999999999999999999999999999999998876544321
Q ss_pred ---------CCC-------------------------------------CeEEEEECCCCCEEEEecCCCeEEEEeCCCc
Q psy4393 152 ---------HSD-------------------------------------PVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 185 (247)
Q Consensus 152 ---------~~~-------------------------------------~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~ 185 (247)
|+. ...+..|++.|+++++|...|.+.++|..+.
T Consensus 106 ~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkllv~~a~t~ 185 (405)
T KOG1273|consen 106 DSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHSVLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKLLVYDAETL 185 (405)
T ss_pred cCccceeeeccccCCeEEEEEecCCcEEEEecCCceeeccCCCccccccccccccccCCCCEEEEecCcceEEEEecchh
Confidence 100 0112236677899999999999999999998
Q ss_pred eeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCC
Q psy4393 186 QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKV 227 (247)
Q Consensus 186 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~ 227 (247)
+++..+.......|..+.++-.|++|+..++|+.||.|+.++
T Consensus 186 e~vas~rits~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~d 227 (405)
T KOG1273|consen 186 ECVASFRITSVQAIKQIIVSRKGRFLIINTSDRVIRTYEISD 227 (405)
T ss_pred eeeeeeeechheeeeEEEEeccCcEEEEecCCceEEEEehhh
Confidence 887766544456788999999999999999999999999874
No 153
>KOG1063|consensus
Probab=99.84 E-value=2.4e-19 Score=145.70 Aligned_cols=215 Identities=23% Similarity=0.418 Sum_probs=166.8
Q ss_pred CCCceEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCe----EEEEEecccCCeEEEEECCCCCEEEEEcC
Q psy4393 14 KPNYVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK----FEKTISGHKLGISDVAWSSDSRLLVSGSD 89 (247)
Q Consensus 14 ~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 89 (247)
+..|.+.-.+.||.+.|+.++|+|.|++|++.+.|.+-|++-....+ ....-+.|...++++++-+..-.+++|.+
T Consensus 348 ~~~w~~~~~iSGH~~~V~dv~W~psGeflLsvs~DQTTRlFa~wg~q~~wHEiaRPQiHGyDl~c~~~vn~~~~FVSgAd 427 (764)
T KOG1063|consen 348 KTFWTQEPVISGHVDGVKDVDWDPSGEFLLSVSLDQTTRLFARWGRQQEWHEIARPQIHGYDLTCLSFVNEDLQFVSGAD 427 (764)
T ss_pred ccceeeccccccccccceeeeecCCCCEEEEeccccceeeecccccccceeeecccccccccceeeehccCCceeeeccc
Confidence 34566666678999999999999999999999999999998654211 11122345666888998886566888888
Q ss_pred CCeEEEEECCC-------------------------------------------ceE-----------------------
Q psy4393 90 DKTLKIWELSS-------------------------------------------GKC----------------------- 103 (247)
Q Consensus 90 d~~i~v~d~~~-------------------------------------------~~~----------------------- 103 (247)
...+++|+... |..
T Consensus 428 EKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~~et~~~~~p~~L~ePP~Ed 507 (764)
T KOG1063|consen 428 EKVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVCAETPLAAAPCELTEPPTED 507 (764)
T ss_pred ceeeeeecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCcccccccccccceeeecccccCchhccCCChHH
Confidence 88888887421 000
Q ss_pred ----------EEEEecCCccEEEEEEcCCCCEEEEeeCCC-----CEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEE
Q psy4393 104 ----------LKTLKGHSNYVFCCNFNPQSNLIVSGSFDE-----SVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLI 168 (247)
Q Consensus 104 ----------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 168 (247)
++++.+|...|.+++.+|+++++|+++... .|++|+..+...+..+..|.-.|+.++|+||+++|
T Consensus 508 qLq~~tLwPEv~KLYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~HsLTVT~l~FSpdg~~L 587 (764)
T KOG1063|consen 508 QLQQNTLWPEVHKLYGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQELEGHSLTVTRLAFSPDGRYL 587 (764)
T ss_pred HHHHhccchhhHHhccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhheecccceEEEEEEECCCCcEE
Confidence 011225667799999999999999998754 48999999888888899999999999999999999
Q ss_pred EEecCCCeEEEEeCCCceee---eeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCc
Q psy4393 169 VSSSYDGLCRIWDTASGQCL---KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVV 228 (247)
Q Consensus 169 ~~~~~dg~i~v~d~~~~~~~---~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~ 228 (247)
++.+.|.++.+|........ ......|..-|..+.|+|++.++++++.|..|+||.....
T Consensus 588 LsvsRDRt~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~~~~ 650 (764)
T KOG1063|consen 588 LSVSRDRTVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVWEEPDL 650 (764)
T ss_pred EEeecCceEEeeeeecccchhhhhccccccceEEEEcccCcccceeEEecCCceEEEEeccCc
Confidence 99999999999986433211 1123455667889999999999999999999999987654
No 154
>KOG2919|consensus
Probab=99.83 E-value=6.6e-19 Score=131.74 Aligned_cols=206 Identities=20% Similarity=0.406 Sum_probs=154.1
Q ss_pred CCCeEEEEEC-------CCCCEEEEEeCCCeEEEEecCCCeEEEEEeccc-----CCeEEEEECCCCCEEEEEcCCCeEE
Q psy4393 27 TKAVSSVKFS-------PNGEWLASSSADKLIKIWGAYDGKFEKTISGHK-----LGISDVAWSSDSRLLVSGSDDKTLK 94 (247)
Q Consensus 27 ~~~v~~~~~s-------~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~~~d~~i~ 94 (247)
...|..-+|- |+..++++.+.+.-|++||..+++...++.... ....+++|+|||..|++| ....|+
T Consensus 104 g~tvydy~wYs~M~s~qP~t~l~a~ssr~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaG-ykrcir 182 (406)
T KOG2919|consen 104 GETVYDYCWYSRMKSDQPSTNLFAVSSRDQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAG-YKRCIR 182 (406)
T ss_pred CCEEEEEEeeeccccCCCccceeeeccccCceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeec-ccceEE
Confidence 3456666663 677788999999999999999999888776432 245789999999999876 567899
Q ss_pred EEEC-CCceE--EEEE-----ecCCccEEEEEEcCCCC-EEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCC
Q psy4393 95 IWEL-SSGKC--LKTL-----KGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDG 165 (247)
Q Consensus 95 v~d~-~~~~~--~~~~-----~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~ 165 (247)
++|+ +.|.. +... .+..+.+.+++++|... .++.|+-..++-|+.-....++..+..|.+.|+.++|.++|
T Consensus 183 vFdt~RpGr~c~vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~gGvThL~~~edG 262 (406)
T KOG2919|consen 183 VFDTSRPGRDCPVYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGGGVTHLQWCEDG 262 (406)
T ss_pred EeeccCCCCCCcchhhhhcccccccceeeeeeccCCCCcceeeecccceeeeEecCCCCceeeecccCCCeeeEEeccCc
Confidence 9998 44431 1111 12356688899999654 78888888888888777778888888999999999999999
Q ss_pred CEEEEecC-CCeEEEEeCCCcee-eeeeccCC--CCCeEEEEECCCCCEEEEEEcCCeEEEEECCC-cceEEE
Q psy4393 166 SLIVSSSY-DGLCRIWDTASGQC-LKTLIDDD--NPPVSFVKFSPNGKYILAATLDNTLKLWDSKV-VTPAII 233 (247)
Q Consensus 166 ~~l~~~~~-dg~i~v~d~~~~~~-~~~~~~~~--~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~-~~~~~~ 233 (247)
+.|++|+. +-.|..||++.... +..+..+. ...=......|++++|++|++||.|++||.+. +++..+
T Consensus 263 n~lfsGaRk~dkIl~WDiR~~~~pv~~L~rhv~~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~~gn~~sv 335 (406)
T KOG2919|consen 263 NKLFSGARKDDKILCWDIRYSRDPVYALERHVGDTNQRILFDLDPKGEILASGDTDGSVRVWDLKDLGNEVSV 335 (406)
T ss_pred CeecccccCCCeEEEEeehhccchhhhhhhhccCccceEEEecCCCCceeeccCCCccEEEEecCCCCCcccc
Confidence 99999986 56899999987542 22222111 11122356689999999999999999999988 453333
No 155
>KOG0303|consensus
Probab=99.82 E-value=5.4e-19 Score=135.26 Aligned_cols=169 Identities=28% Similarity=0.553 Sum_probs=139.1
Q ss_pred EEecccCCeEEEEECC-CCCEEEEEcCCCeEEEEECCCc-------eEEEEEecCCccEEEEEEcCC-CCEEEEeeCCCC
Q psy4393 64 TISGHKLGISDVAWSS-DSRLLVSGSDDKTLKIWELSSG-------KCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDES 134 (247)
Q Consensus 64 ~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~v~d~~~~-------~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~ 134 (247)
.+.+|..+|.+++|+| +.+.|++|++|.+|.+|++..+ +.+..+.+|...|..+.|+|. .+.|++++.|..
T Consensus 76 ~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~ 155 (472)
T KOG0303|consen 76 LVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNT 155 (472)
T ss_pred CccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCce
Confidence 4678999999999999 5677999999999999998653 346678899999999999995 478889999999
Q ss_pred EEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEE
Q psy4393 135 VRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAA 214 (247)
Q Consensus 135 i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 214 (247)
|.+||+.+++.+..+. |..-|.+|.|+.||.+|++++.|..|+|||.++++.+..-..+.+..-....|-.+|..+.+|
T Consensus 156 v~iWnv~tgeali~l~-hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e~~~heG~k~~Raifl~~g~i~tTG 234 (472)
T KOG0303|consen 156 VSIWNVGTGEALITLD-HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSEGVAHEGAKPARAIFLASGKIFTTG 234 (472)
T ss_pred EEEEeccCCceeeecC-CCCeEEEEEeccCCceeeeecccceeEEEcCCCCcEeeecccccCCCcceeEEeccCceeeec
Confidence 9999999999888877 999999999999999999999999999999999988776643433333445677888855555
Q ss_pred E---cCCeEEEEECCCc-ceEEE
Q psy4393 215 T---LDNTLKLWDSKVV-TPAII 233 (247)
Q Consensus 215 ~---~dg~i~vwd~~~~-~~~~~ 233 (247)
. .+..+-+||.... .|+..
T Consensus 235 fsr~seRq~aLwdp~nl~eP~~~ 257 (472)
T KOG0303|consen 235 FSRMSERQIALWDPNNLEEPIAL 257 (472)
T ss_pred cccccccceeccCcccccCccee
Confidence 3 4789999998765 35443
No 156
>KOG4328|consensus
Probab=99.82 E-value=6.1e-19 Score=137.13 Aligned_cols=216 Identities=19% Similarity=0.319 Sum_probs=163.6
Q ss_pred eEEEEEecCCCCeEEEEECCC-CCEEEEEeCCCeEEEEecCCCeEEEEEec--ccCCeEEEEECCCCCEEEEEcCCCeEE
Q psy4393 18 VLKFTLAGHTKAVSSVKFSPN-GEWLASSSADKLIKIWGAYDGKFEKTISG--HKLGISDVAWSSDSRLLVSGSDDKTLK 94 (247)
Q Consensus 18 ~~~~~~~~h~~~v~~~~~s~~-~~~l~~~~~dg~v~iw~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i~ 94 (247)
.-.+-+..|..+|.++.|+|. -..+++.+.||+++.-|.+.......+.. ....+.++.|+.+...++.+..-|...
T Consensus 225 d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGtiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~ 304 (498)
T KOG4328|consen 225 DGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGTIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFN 304 (498)
T ss_pred CceEEeccCCccccceEecCCChhheeeeccCceeeeeeecchhhHHHhhcCccceeeeeccccCCCccEEEeecccceE
Confidence 334555679999999999995 45788899999999999877654433332 344577788888878888888888999
Q ss_pred EEECCCceE-EEEEecCCccEEEEEEcCCC-CEEEEeeCCCCEEEEECCCCeE----EEeecCCCCCeEEEEECCCCCEE
Q psy4393 95 IWELSSGKC-LKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVRTGKC----LKTLPAHSDPVSAVHFNRDGSLI 168 (247)
Q Consensus 95 v~d~~~~~~-~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~v~d~~~~~~----~~~~~~~~~~i~~~~~~~~~~~l 168 (247)
+||.+++.. ...+.-|...|..++++|.. .+++|++.|++.+|||+|.-.. +-....|..+|.++.|+|++-.|
T Consensus 305 ~iD~R~~~s~~~~~~lh~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl 384 (498)
T KOG4328|consen 305 VIDLRTDGSEYENLRLHKKKITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTL 384 (498)
T ss_pred EEEeecCCccchhhhhhhcccceeecCCCCchheeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCce
Confidence 999987653 45566677789999999955 5789999999999999985332 23345788899999999998889
Q ss_pred EEecCCCeEEEEeCC----CceeeeeeccCCCC----CeEEEEECCCCCEEEEEEcCCeEEEEECCCcceEEE
Q psy4393 169 VSSSYDGLCRIWDTA----SGQCLKTLIDDDNP----PVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAII 233 (247)
Q Consensus 169 ~~~~~dg~i~v~d~~----~~~~~~~~~~~~~~----~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~ 233 (247)
++.+.|..|+|||.. .-.....+...+.. ..-...|+|+..+++.|-.-..|-|+|.+.++-+..
T Consensus 385 ~TT~~D~~IRv~dss~~sa~~~p~~~I~Hn~~t~RwlT~fKA~W~P~~~li~vg~~~r~IDv~~~~~~q~v~e 457 (498)
T KOG4328|consen 385 LTTCQDNEIRVFDSSCISAKDEPLGTIPHNNRTGRWLTPFKAAWDPDYNLIVVGRYPRPIDVFDGNGGQMVCE 457 (498)
T ss_pred EeeccCCceEEeecccccccCCccceeeccCcccccccchhheeCCCccEEEEeccCcceeEEcCCCCEEeee
Confidence 999999999999984 22222222221111 122367999999999999999999999988774444
No 157
>KOG1007|consensus
Probab=99.82 E-value=2.5e-18 Score=126.89 Aligned_cols=205 Identities=26% Similarity=0.398 Sum_probs=153.8
Q ss_pred EEEEe-cCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeE-EEEEe-----cccCCeEEEEECC--CCCEEEEEcCC
Q psy4393 20 KFTLA-GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF-EKTIS-----GHKLGISDVAWSS--DSRLLVSGSDD 90 (247)
Q Consensus 20 ~~~~~-~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~-~~~~~-----~~~~~v~~~~~~~--~~~~l~~~~~d 90 (247)
...+. .+.+.|.|+.|.|++..+++.. |..|.+|+...+.. ...+. .+....++-+|+| +++.+++. .|
T Consensus 115 v~~Ldteavg~i~cvew~Pns~klasm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt-~d 192 (370)
T KOG1007|consen 115 VASLDTEAVGKINCVEWEPNSDKLASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATT-SD 192 (370)
T ss_pred hhcCCHHHhCceeeEEEcCCCCeeEEec-cCceEEEEcccCcchheeecccccccccceecccccCCCCccceEEEe-CC
Confidence 33443 5667999999999999998865 77899999876554 33322 2344567778998 67777666 57
Q ss_pred CeEEEEECCCceEEEEE-ecCCccEEEEEEcCCCC-EEEEeeCCCCEEEEECCCC-eEEEeecCCCCCeEEEEECCC-CC
Q psy4393 91 KTLKIWELSSGKCLKTL-KGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVRTG-KCLKTLPAHSDPVSAVHFNRD-GS 166 (247)
Q Consensus 91 ~~i~v~d~~~~~~~~~~-~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~-~~~~~~~~~~~~i~~~~~~~~-~~ 166 (247)
+++..||+++......+ .+|...+..+.|+|+.+ ++++++.||.|++||+|.. .+++.+..|...+.++.|+|. .+
T Consensus 193 ~tl~~~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~HsHWvW~VRfn~~hdq 272 (370)
T KOG1007|consen 193 STLQFWDLRTMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPGHSHWVWAVRFNPEHDQ 272 (370)
T ss_pred CcEEEEEccchhhhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccCCCceEEEEEEecCccce
Confidence 89999999987655444 46777899999999765 5788999999999999864 467888999999999999995 45
Q ss_pred EEEEecCCCeEEEEeCCCce------------------------eeee----eccCCCCCeEEEEECCCCCEEE-EEEcC
Q psy4393 167 LIVSSSYDGLCRIWDTASGQ------------------------CLKT----LIDDDNPPVSFVKFSPNGKYIL-AATLD 217 (247)
Q Consensus 167 ~l~~~~~dg~i~v~d~~~~~------------------------~~~~----~~~~~~~~v~~~~~s~~~~~l~-~~~~d 217 (247)
++++|+.|..|.+|....-. ++.. ....+...|.+++||.-..++. +-+.|
T Consensus 273 LiLs~~SDs~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~tydehEDSVY~~aWSsadPWiFASLSYD 352 (370)
T KOG1007|consen 273 LILSGGSDSAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLETYDEHEDSVYALAWSSADPWIFASLSYD 352 (370)
T ss_pred EEEecCCCceeEEEeccccccccccccccccccCcchhhHHhcccccccccccccccccceEEEeeccCCCeeEEEeccC
Confidence 77899999999999764321 0000 1233456789999998777765 55789
Q ss_pred CeEEEEECC
Q psy4393 218 NTLKLWDSK 226 (247)
Q Consensus 218 g~i~vwd~~ 226 (247)
|++.|=...
T Consensus 353 GRviIs~V~ 361 (370)
T KOG1007|consen 353 GRVIISSVP 361 (370)
T ss_pred ceEEeecCC
Confidence 999886544
No 158
>KOG0649|consensus
Probab=99.82 E-value=5.9e-18 Score=122.20 Aligned_cols=212 Identities=20% Similarity=0.267 Sum_probs=154.6
Q ss_pred CeEEEEECCCCCEEEEEeCCCeEEEEecCC---------Ce-EEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEEC
Q psy4393 29 AVSSVKFSPNGEWLASSSADKLIKIWGAYD---------GK-FEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWEL 98 (247)
Q Consensus 29 ~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~---------~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~ 98 (247)
.|.+-+++|.+++|++|+.+|.|.+..+.. ++ ......+|+.++..++|. ..++++++ ||.|+-|..
T Consensus 12 tvf~qa~sp~~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~--d~~Lls~g-dG~V~gw~W 88 (325)
T KOG0649|consen 12 TVFAQAISPSKQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFH--DDFLLSGG-DGLVYGWEW 88 (325)
T ss_pred HHHHHhhCCcceEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeee--hhheeecc-CceEEEeee
Confidence 455668999999999999999999997642 11 122346799999999998 34566665 599999876
Q ss_pred CCceE------EEEEe-------cCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCC
Q psy4393 99 SSGKC------LKTLK-------GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDG 165 (247)
Q Consensus 99 ~~~~~------~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~ 165 (247)
..... +...+ .....|+++...|..+-+++++.|+.++-||+++|+..++++.|...+.++.--...
T Consensus 89 ~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~~ 168 (325)
T KOG0649|consen 89 NEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIYQVDLEDGRIQREYRGHTDYVHSVVGRNAN 168 (325)
T ss_pred hhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCeEEEEEEecCCEEEEEEcCCcceeeeeeecccC
Confidence 53211 10111 112457889999988888888899999999999999999999999999999874445
Q ss_pred CEEEEecCCCeEEEEeCCCceeeeeeccCC---------CCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcceEEE--E
Q psy4393 166 SLIVSSSYDGLCRIWDTASGQCLKTLIDDD---------NPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAII--C 234 (247)
Q Consensus 166 ~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~---------~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~--~ 234 (247)
..+++|++||++++||.++++....+.... ..-|.++ .-+..+|++|+ ...+.+|.++..++..+ +
T Consensus 169 ~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wigal--a~~edWlvCGg-Gp~lslwhLrsse~t~vfpi 245 (325)
T KOG0649|consen 169 GQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGAL--AVNEDWLVCGG-GPKLSLWHLRSSESTCVFPI 245 (325)
T ss_pred cceeecCCCccEEEEeccccceeEEeccccChhhcCcccCceeEEE--eccCceEEecC-CCceeEEeccCCCceEEEec
Confidence 568899999999999999998877653321 1223344 45567888876 46899999998765554 3
Q ss_pred ccCCcccceeec
Q psy4393 235 STPLNLNYFYRN 246 (247)
Q Consensus 235 ~~~~~~~~~~~~ 246 (247)
..+.-...|+.|
T Consensus 246 pa~v~~v~F~~d 257 (325)
T KOG0649|consen 246 PARVHLVDFVDD 257 (325)
T ss_pred ccceeEeeeecc
Confidence 444445555544
No 159
>KOG0321|consensus
Probab=99.82 E-value=1.1e-18 Score=140.86 Aligned_cols=196 Identities=23% Similarity=0.387 Sum_probs=146.3
Q ss_pred EEECCC--C-CEEEEEeCCCeEEEEecCCCeEE------EEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceE
Q psy4393 33 VKFSPN--G-EWLASSSADKLIKIWGAYDGKFE------KTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKC 103 (247)
Q Consensus 33 ~~~s~~--~-~~l~~~~~dg~v~iw~~~~~~~~------~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~ 103 (247)
..|++. . ..|+.+.++|.|.++|....... .....|...|.++.|.|....|++++.|.++++||++++..
T Consensus 55 ~sFs~~~n~eHiLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~l 134 (720)
T KOG0321|consen 55 DSFSAAPNKEHILAVADEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSRL 134 (720)
T ss_pred ccccCCCCccceEEEecCCCceeeecchhhhcchhhhhhcccccccceeEeeccCCCceeEEEccCCceeeeeeecccee
Confidence 566552 2 36788999999999997543322 33456889999999999777899999999999999999887
Q ss_pred EEE--EecCCccEEEEEEcCC-CCEEEEeeCCCCEEEEECCCCeE---------------------------EEeecCCC
Q psy4393 104 LKT--LKGHSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVRTGKC---------------------------LKTLPAHS 153 (247)
Q Consensus 104 ~~~--~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~v~d~~~~~~---------------------------~~~~~~~~ 153 (247)
... +.+|...+..++|.|. ...|++|+.||.+.|||++-... +...+++.
T Consensus 135 ~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s 214 (720)
T KOG0321|consen 135 VGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAAS 214 (720)
T ss_pred ecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhcccccccccc
Confidence 765 7899999999999985 46789999999999999974320 01112333
Q ss_pred CCeEE---EEECCCCCEEEEecC-CCeEEEEeCCCceeeeeec--------cC--CCCCeEEEEECCCCCEEEEEEcCCe
Q psy4393 154 DPVSA---VHFNRDGSLIVSSSY-DGLCRIWDTASGQCLKTLI--------DD--DNPPVSFVKFSPNGKYILAATLDNT 219 (247)
Q Consensus 154 ~~i~~---~~~~~~~~~l~~~~~-dg~i~v~d~~~~~~~~~~~--------~~--~~~~v~~~~~s~~~~~l~~~~~dg~ 219 (247)
..|.+ +-+..|...||+++. |+.|+|||++..+...... .+ ....+.++..+..|.+|.+.+.|+.
T Consensus 215 ~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD~s 294 (720)
T KOG0321|consen 215 NTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCTDNS 294 (720)
T ss_pred CceeeeeEEEEEeccceeeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCCCCeEEEEecCCc
Confidence 33444 445567888888877 9999999999765432211 11 1234667888888999999989999
Q ss_pred EEEEECCCc
Q psy4393 220 LKLWDSKVV 228 (247)
Q Consensus 220 i~vwd~~~~ 228 (247)
|.+|++...
T Consensus 295 Iy~ynm~s~ 303 (720)
T KOG0321|consen 295 IYFYNMRSL 303 (720)
T ss_pred EEEEecccc
Confidence 999998754
No 160
>KOG1445|consensus
Probab=99.82 E-value=4.3e-19 Score=143.43 Aligned_cols=210 Identities=19% Similarity=0.355 Sum_probs=157.7
Q ss_pred CCCeEEEEECC-CCCEEEEEeCCCeEEEEecCCC-------eEEEEEecccCCeEEEEECC-CCCEEEEEcCCCeEEEEE
Q psy4393 27 TKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDG-------KFEKTISGHKLGISDVAWSS-DSRLLVSGSDDKTLKIWE 97 (247)
Q Consensus 27 ~~~v~~~~~s~-~~~~l~~~~~dg~v~iw~~~~~-------~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~v~d 97 (247)
...|+.+.|.| |.+.||.++.||.|++|.+..+ .....+..|...|.++.|+| ..+.|++++.|.+|++||
T Consensus 627 gt~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWD 706 (1012)
T KOG1445|consen 627 GTLVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPENEMTPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIELWD 706 (1012)
T ss_pred CceeeecccCCCChHHeeecccCceEEEEEeccCCCCcccCCcceeeecccceEEEEEecchhhhHhhhhhccceeeeee
Confidence 45689999999 7789999999999999997543 23456788999999999999 467789999999999999
Q ss_pred CCCceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeE-EEeecCC-CCCeEEEEECCCCCEEEEecCCC
Q psy4393 98 LSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC-LKTLPAH-SDPVSAVHFNRDGSLIVSSSYDG 175 (247)
Q Consensus 98 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~-~~~~~~~-~~~i~~~~~~~~~~~l~~~~~dg 175 (247)
+.+.+....+.+|.+.|..++|+|+|+.+++.+.||.+++|+.++++. +.+-+.. ...-..+.|.=+|+++++.+.|.
T Consensus 707 l~~~~~~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~rVy~Prs~e~pv~Eg~gpvgtRgARi~wacdgr~viv~Gfdk 786 (1012)
T KOG1445|consen 707 LANAKLYSRLVGHTDQIFGIAWSPDGRRIATVCKDGTLRVYEPRSREQPVYEGKGPVGTRGARILWACDGRIVIVVGFDK 786 (1012)
T ss_pred hhhhhhhheeccCcCceeEEEECCCCcceeeeecCceEEEeCCCCCCCccccCCCCccCcceeEEEEecCcEEEEecccc
Confidence 999988888999999999999999999999999999999999987653 2222211 11223466777899888877664
Q ss_pred ----eEEEEeCCCce--eeeeeccCCCCCeEEEEECCCCCE-EEEEEcCCeEEEEECCCcceEEEEcc
Q psy4393 176 ----LCRIWDTASGQ--CLKTLIDDDNPPVSFVKFSPNGKY-ILAATLDNTLKLWDSKVVTPAIICST 236 (247)
Q Consensus 176 ----~i~v~d~~~~~--~~~~~~~~~~~~v~~~~~s~~~~~-l~~~~~dg~i~vwd~~~~~~~~~~~~ 236 (247)
++.+||..+.. .+.+........+..-.+++|... +++|-.|..|.+|+.-...|.+..-.
T Consensus 787 ~SeRQv~~Y~Aq~l~~~pl~t~~lDvaps~LvP~YD~Ds~~lfltGKGD~~v~~yEv~~esPy~lpl~ 854 (1012)
T KOG1445|consen 787 SSERQVQMYDAQTLDLRPLYTQVLDVAPSPLVPHYDYDSNVLFLTGKGDRFVNMYEVIYESPYLLPLA 854 (1012)
T ss_pred cchhhhhhhhhhhccCCcceeeeecccCccccccccCCCceEEEecCCCceEEEEEecCCCceeeecc
Confidence 68889876532 233222222222222345666654 45666799999999877777655333
No 161
>KOG1009|consensus
Probab=99.82 E-value=2.5e-18 Score=131.92 Aligned_cols=213 Identities=29% Similarity=0.467 Sum_probs=162.0
Q ss_pred CCCeEEEEECCCCC-EEEEEeCCCeEEEEecCCC---------eEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEE
Q psy4393 27 TKAVSSVKFSPNGE-WLASSSADKLIKIWGAYDG---------KFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIW 96 (247)
Q Consensus 27 ~~~v~~~~~s~~~~-~l~~~~~dg~v~iw~~~~~---------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~ 96 (247)
..+|.++.|.++.. .+++|+.|..|++|.+... +....+..|...|+.+.|+|+|+.+++|+.+|.+.+|
T Consensus 13 ~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lW 92 (434)
T KOG1009|consen 13 HEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFLW 92 (434)
T ss_pred CCceEEEEeccCcccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEEEE
Confidence 46899999999776 9999999999999986432 2334577899999999999999999999999999999
Q ss_pred ECC--------C--------ceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEE
Q psy4393 97 ELS--------S--------GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVH 160 (247)
Q Consensus 97 d~~--------~--------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~ 160 (247)
... + -...+.+.+|...+..++|+|++.++++++-|..+++||+..|+....+..|...+..++
T Consensus 93 k~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~l~~~~~dh~~yvqgva 172 (434)
T KOG1009|consen 93 KQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQLLAILDDHEHYVQGVA 172 (434)
T ss_pred EecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEeccceeEeeccccccccceee
Confidence 765 2 123345678888999999999999999999999999999999999999999999999999
Q ss_pred ECCCCCEEEEecCCCeEEEEeCCCceeeeee--------------------ccCCC--CCeEEEEECCCCCEEEEEEc--
Q psy4393 161 FNRDGSLIVSSSYDGLCRIWDTASGQCLKTL--------------------IDDDN--PPVSFVKFSPNGKYILAATL-- 216 (247)
Q Consensus 161 ~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~--------------------~~~~~--~~v~~~~~s~~~~~l~~~~~-- 216 (247)
|.|-++++++-+.|...+.+.+...+..+.. +..+. .-...++|+|||.+|++...
T Consensus 173 wDpl~qyv~s~s~dr~~~~~~~~~~~~~~~~~~~~m~~~~~~~~e~~s~rLfhDeTlksFFrRlsfTPdG~llvtPag~~ 252 (434)
T KOG1009|consen 173 WDPLNQYVASKSSDRHPEGFSAKLKQVIKRHGLDIMPAKAFNEREGKSTRLFHDETLKSFFRRLSFTPDGSLLVTPAGLF 252 (434)
T ss_pred cchhhhhhhhhccCcccceeeeeeeeeeeeeeeeEeeecccCCCCcceeeeeecCchhhhhhhcccCCCCcEEEccccee
Confidence 9999999998888886666665433221111 01110 11245789999999987541
Q ss_pred --CC-----eEEEEECCCc-ceEEEEccCCc
Q psy4393 217 --DN-----TLKLWDSKVV-TPAIICSTPLN 239 (247)
Q Consensus 217 --dg-----~i~vwd~~~~-~~~~~~~~~~~ 239 (247)
++ ..++|+.+.. .|..-+..+..
T Consensus 253 ~~g~~~~~n~tYvfsrk~l~rP~~~lp~~~k 283 (434)
T KOG1009|consen 253 KVGGGVFRNTSYVFSRKDLKRPAARLPSPKK 283 (434)
T ss_pred eeCCceeeceeEeeccccccCceeecCCCCc
Confidence 23 3466766543 34444444333
No 162
>KOG1188|consensus
Probab=99.81 E-value=3.4e-18 Score=128.63 Aligned_cols=198 Identities=22% Similarity=0.388 Sum_probs=152.8
Q ss_pred CEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECC--CCCEEEEEcCCCeEEEEECCCceEEEE--EecCC-ccE
Q psy4393 40 EWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS--DSRLLVSGSDDKTLKIWELSSGKCLKT--LKGHS-NYV 114 (247)
Q Consensus 40 ~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~v~d~~~~~~~~~--~~~~~-~~v 114 (247)
..+|++-.+|.|++||..+++....+++++..+..+.|.. ....+.+++.||+|++||++....... ...+. .+.
T Consensus 41 ~~vav~lSngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f 120 (376)
T KOG1188|consen 41 TAVAVSLSNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTPF 120 (376)
T ss_pred eeEEEEecCCeEEEEeccchhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCCcc
Confidence 5688888999999999999999999999998899999976 455789999999999999987654433 33333 345
Q ss_pred EEEEEcCCCCEEEEeeC----CCCEEEEECCCCeE-EEe-ecCCCCCeEEEEECCC-CCEEEEecCCCeEEEEeCCCcee
Q psy4393 115 FCCNFNPQSNLIVSGSF----DESVRIWDVRTGKC-LKT-LPAHSDPVSAVHFNRD-GSLIVSSSYDGLCRIWDTASGQC 187 (247)
Q Consensus 115 ~~~~~~~~~~~l~~~~~----d~~i~v~d~~~~~~-~~~-~~~~~~~i~~~~~~~~-~~~l~~~~~dg~i~v~d~~~~~~ 187 (247)
.+++.+..++++++|.. +-.+.+||.|..+. +.. ...|...|++++|+|+ ..+|++|+.||.+.+||+.....
T Consensus 121 ~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d~E 200 (376)
T KOG1188|consen 121 ICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKDNE 200 (376)
T ss_pred eEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeecCCCcc
Confidence 56666667888888864 45699999998765 433 4578899999999995 46899999999999999875432
Q ss_pred eeeec--cCCCCCeEEEEECCCC-CEEEEEEcCCeEEEEECCCcceEEEEccC
Q psy4393 188 LKTLI--DDDNPPVSFVKFSPNG-KYILAATLDNTLKLWDSKVVTPAIICSTP 237 (247)
Q Consensus 188 ~~~~~--~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~vwd~~~~~~~~~~~~~ 237 (247)
.-.+. ......|..+.|..++ +.+.+-+......+|+.+.+.+..-+..|
T Consensus 201 eDaL~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~~~~~~~~~~~ 253 (376)
T KOG1188|consen 201 EDALLHVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELEDGSEETWLENP 253 (376)
T ss_pred hhhHHHhhcccceeeeeeeecCCcceEEEEEccCceeEEEccCCChhhcccCc
Confidence 22221 1345678999998876 45888899999999999988765544443
No 163
>KOG1272|consensus
Probab=99.81 E-value=1.1e-19 Score=141.68 Aligned_cols=206 Identities=20% Similarity=0.305 Sum_probs=176.5
Q ss_pred CCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceEEEEE
Q psy4393 28 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTL 107 (247)
Q Consensus 28 ~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~ 107 (247)
-+-..+.++.+|++|+.|+..|.|--+|..+++....+.. ...|.++.|-.+.++++++ ....+++||- .|..++.+
T Consensus 130 FGPY~~~ytrnGrhlllgGrKGHlAa~Dw~t~~L~~Ei~v-~Etv~Dv~~LHneq~~AVA-QK~y~yvYD~-~GtElHCl 206 (545)
T KOG1272|consen 130 FGPYHLDYTRNGRHLLLGGRKGHLAAFDWVTKKLHFEINV-METVRDVTFLHNEQFFAVA-QKKYVYVYDN-NGTELHCL 206 (545)
T ss_pred cCCeeeeecCCccEEEecCCccceeeeecccceeeeeeeh-hhhhhhhhhhcchHHHHhh-hhceEEEecC-CCcEEeeh
Confidence 3456789999999999999999999999999888777764 3458889999888877766 5678999995 57777878
Q ss_pred ecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCCCeEEEEeCCCcee
Q psy4393 108 KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC 187 (247)
Q Consensus 108 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~ 187 (247)
+.+. .+..+.|-|..-+|++++..|.++..|+.+|+.+..+....+.+..|+-+|-+..+-+|...|+|.+|.....++
T Consensus 207 k~~~-~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~G~~~vm~qNP~NaVih~GhsnGtVSlWSP~skeP 285 (545)
T KOG1272|consen 207 KRHI-RVARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASIRTGAGRTDVMKQNPYNAVIHLGHSNGTVSLWSPNSKEP 285 (545)
T ss_pred hhcC-chhhhcccchhheeeecccCCceEEEeechhhhhHHHHccCCccchhhcCCccceEEEcCCCceEEecCCCCcch
Confidence 7654 578899999999999999999999999999999999988889999999999999999999999999999988877
Q ss_pred eeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcceEEEEccCC
Q psy4393 188 LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTPL 238 (247)
Q Consensus 188 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~ 238 (247)
+..+.. +.++|..++++++|+|+++++.|..++|||++.-..+.++..|+
T Consensus 286 LvKiLc-H~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~tp~ 335 (545)
T KOG1272|consen 286 LVKILC-HRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYRTPH 335 (545)
T ss_pred HHHHHh-cCCCcceEEECCCCcEEeecccccceeEeeeccccccceeecCC
Confidence 766543 45789999999999999999999999999999876655655543
No 164
>KOG0321|consensus
Probab=99.81 E-value=2.2e-18 Score=138.99 Aligned_cols=205 Identities=18% Similarity=0.339 Sum_probs=148.7
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEE--EecccCCeEEEEECCCC-CEEEEEcCCCeEEEEECCCc
Q psy4393 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT--ISGHKLGISDVAWSSDS-RLLVSGSDDKTLKIWELSSG 101 (247)
Q Consensus 25 ~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~--~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~v~d~~~~ 101 (247)
.|...|..+.|.|....|++++.|.+++.||+...+.... +.+|...|.+++|.|.. ..+++|+.||.+.|||++-.
T Consensus 98 aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n 177 (720)
T KOG0321|consen 98 AHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSRLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCN 177 (720)
T ss_pred cccceeEeeccCCCceeEEEccCCceeeeeeeccceeecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEecc
Confidence 6899999999999666788999999999999988877655 88999999999999965 56889999999999997532
Q ss_pred e--------------------E-------EEEEecCCccEEE---EEEcCCCCEEEEeeC-CCCEEEEECCCCeEEEe--
Q psy4393 102 K--------------------C-------LKTLKGHSNYVFC---CNFNPQSNLIVSGSF-DESVRIWDVRTGKCLKT-- 148 (247)
Q Consensus 102 ~--------------------~-------~~~~~~~~~~v~~---~~~~~~~~~l~~~~~-d~~i~v~d~~~~~~~~~-- 148 (247)
. . .+..+++...+.. +.+..|...||+++. |+.|+|||++.......
T Consensus 178 ~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~e 257 (720)
T KOG0321|consen 178 GVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAYRQE 257 (720)
T ss_pred chhhHHHHhhhhhccccCCCCCCchhhccccccccccCceeeeeEEEEEeccceeeeccCCCcceEEEeecccccccccC
Confidence 1 0 0111222333333 445567778888777 99999999987543221
Q ss_pred ------ecCC---CCCeEEEEECCCCCEEEEecCCCeEEEEeCCCceee--eeeccCCCCC-eEEEEECCCCCEEEEEEc
Q psy4393 149 ------LPAH---SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCL--KTLIDDDNPP-VSFVKFSPNGKYILAATL 216 (247)
Q Consensus 149 ------~~~~---~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~--~~~~~~~~~~-v~~~~~s~~~~~l~~~~~ 216 (247)
+..+ ...+.++..+..|.+|++.+.|+.|.+||+.+...- ..+....... ...-..+||+.+|++|+.
T Consensus 258 p~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD~sIy~ynm~s~s~sP~~~~sg~~~~sf~vks~lSpd~~~l~SgSs 337 (720)
T KOG0321|consen 258 PRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCTDNSIYFYNMRSLSISPVAEFSGKLNSSFYVKSELSPDDCSLLSGSS 337 (720)
T ss_pred CCcccCccCcccceeeeEEEEecCCCCeEEEEecCCcEEEEeccccCcCchhhccCcccceeeeeeecCCCCceEeccCC
Confidence 1122 234677888888898888888999999999865322 2111111111 112346899999999999
Q ss_pred CCeEEEEECCCcc
Q psy4393 217 DNTLKLWDSKVVT 229 (247)
Q Consensus 217 dg~i~vwd~~~~~ 229 (247)
|....+|.++...
T Consensus 338 d~~ayiw~vs~~e 350 (720)
T KOG0321|consen 338 DEQAYIWVVSSPE 350 (720)
T ss_pred CcceeeeeecCcc
Confidence 9999999987653
No 165
>KOG0322|consensus
Probab=99.81 E-value=1.3e-18 Score=126.81 Aligned_cols=203 Identities=24% Similarity=0.375 Sum_probs=147.8
Q ss_pred EEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEe-cccCCeEEEEECCCCCEEEEEcCCCeEEEEEC
Q psy4393 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS-GHKLGISDVAWSSDSRLLVSGSDDKTLKIWEL 98 (247)
Q Consensus 20 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~ 98 (247)
.|.+..|.+.|+++.|..+++ |++|..-|.|++|+..+.+....+. .+...|+.+...|+ ..+.+-+.|+.+.+|++
T Consensus 7 ~fvLRp~~~~v~s~~fqa~~r-L~sg~~~G~V~~w~lqt~r~~~~~r~~g~~~it~lq~~p~-d~l~tqgRd~~L~lw~i 84 (323)
T KOG0322|consen 7 FFVLRPHSSSVTSVLFQANER-LMSGLSVGIVKMWVLQTERDLPLIRLFGRLFITNLQSIPN-DSLDTQGRDPLLILWTI 84 (323)
T ss_pred eeEeccccchheehhhccchh-hhcccccceEEEEEeecCccchhhhhhccceeeceeecCC-cchhhcCCCceEEEEEc
Confidence 455669999999999988766 7889999999999998877776666 34556888887786 55778889999999987
Q ss_pred CCceEEEE--E------------e---------------------------------------cCCccEEEEEEcCC---
Q psy4393 99 SSGKCLKT--L------------K---------------------------------------GHSNYVFCCNFNPQ--- 122 (247)
Q Consensus 99 ~~~~~~~~--~------------~---------------------------------------~~~~~v~~~~~~~~--- 122 (247)
.-+..+.. + . ...+.+.+..+..+
T Consensus 85 a~s~~i~i~Si~~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h~~D~g~~tqv~i~dd~~~~Klgsvmc~~~~~~c~s 164 (323)
T KOG0322|consen 85 AYSAFISIHSIVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETHKQDGGDTTQVQIADDSERSKLGSVMCQDKDHACGS 164 (323)
T ss_pred cCcceEEEeeeeccccccccceeccCCCcchhheecCCcccchhhhhccCccceeEccCchhccccCceeeeeccccccc
Confidence 64321110 0 0 00112233332221
Q ss_pred CCEEEEeeCCCCEEEEECCCCeEEEe----------ecCCCC--------------------------------------
Q psy4393 123 SNLIVSGSFDESVRIWDVRTGKCLKT----------LPAHSD-------------------------------------- 154 (247)
Q Consensus 123 ~~~l~~~~~d~~i~v~d~~~~~~~~~----------~~~~~~-------------------------------------- 154 (247)
.-++++|.++|++.+||+.++..+-. ...|..
T Consensus 165 ~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dkl~~~Sl~~s~gslq~~ 244 (323)
T KOG0322|consen 165 TFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDKLVMYSLNHSTGSLQIR 244 (323)
T ss_pred eEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCCccccceeeeeccccCccccc
Confidence 12567788999999999988632111 111111
Q ss_pred --------CeEEEEECCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEEC
Q psy4393 155 --------PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225 (247)
Q Consensus 155 --------~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~ 225 (247)
.+..+.+-||++.+|++++|+.|++|.-++...+..+..+ ...|++++|+|+...+|+++.|++|.+|+.
T Consensus 245 ~e~~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLkyH-sagvn~vAfspd~~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 245 KEITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLKYH-SAGVNAVAFSPDCELMAAASKDARISLWKL 322 (323)
T ss_pred ceEEecCCCccceEEccCCcEEeecccCCcEEEEEeccCCchhhhhhh-hcceeEEEeCCCCchhhhccCCceEEeeec
Confidence 2344566789999999999999999999999888776544 478999999999999999999999999985
No 166
>KOG1539|consensus
Probab=99.81 E-value=6.4e-17 Score=134.24 Aligned_cols=206 Identities=20% Similarity=0.315 Sum_probs=165.0
Q ss_pred CCCCEEEEEeCCCeEEEEecCCCeEE----EEE-ecccCCeEEEEECCCC--CEEEEEcCCCeEEEEECCCceEEEEEec
Q psy4393 37 PNGEWLASSSADKLIKIWGAYDGKFE----KTI-SGHKLGISDVAWSSDS--RLLVSGSDDKTLKIWELSSGKCLKTLKG 109 (247)
Q Consensus 37 ~~~~~l~~~~~dg~v~iw~~~~~~~~----~~~-~~~~~~v~~~~~~~~~--~~l~~~~~d~~i~v~d~~~~~~~~~~~~ 109 (247)
+-|++++++..++.+.+|+....+.. ..+ ......|+++ ++|+. +.++.|+..|.+.+|++++++.+.++++
T Consensus 122 ~fGe~lia~d~~~~l~vw~~s~~~~e~~l~~~~~~~~~~~Ital-~HP~TYLNKIvvGs~~G~lql~Nvrt~K~v~~f~~ 200 (910)
T KOG1539|consen 122 PFGEHLIAVDISNILFVWKTSSIQEELYLQSTFLKVEGDFITAL-LHPSTYLNKIVVGSSQGRLQLWNVRTGKVVYTFQE 200 (910)
T ss_pred eecceEEEEEccCcEEEEEeccccccccccceeeeccCCceeeE-ecchhheeeEEEeecCCcEEEEEeccCcEEEEecc
Confidence 45788889999999999998764111 112 2222227776 56653 5689999999999999999999999999
Q ss_pred CCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCC-EEEEecCCCeEEEEeCCCceee
Q psy4393 110 HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGS-LIVSSSYDGLCRIWDTASGQCL 188 (247)
Q Consensus 110 ~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~v~d~~~~~~~ 188 (247)
..+.|.++.-+|--..++.|..+|.|.+++++.++.+..++...+.|+++.|.-||. ++++|+..|.+.+||+...+..
T Consensus 201 ~~s~IT~ieqsPaLDVVaiG~~~G~ViifNlK~dkil~sFk~d~g~VtslSFrtDG~p~las~~~~G~m~~wDLe~kkl~ 280 (910)
T KOG1539|consen 201 FFSRITAIEQSPALDVVAIGLENGTVIIFNLKFDKILMSFKQDWGRVTSLSFRTDGNPLLASGRSNGDMAFWDLEKKKLI 280 (910)
T ss_pred cccceeEeccCCcceEEEEeccCceEEEEEcccCcEEEEEEccccceeEEEeccCCCeeEEeccCCceEEEEEcCCCeee
Confidence 999999999999999999999999999999999999999987679999999999987 5667777799999999988877
Q ss_pred eeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECC--Ccce--EEEEccCCcccce
Q psy4393 189 KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSK--VVTP--AIICSTPLNLNYF 243 (247)
Q Consensus 189 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~--~~~~--~~~~~~~~~~~~~ 243 (247)
......+.+.+....|-|....+++++.|+.+++|=.+ ++.| +....+++.|-..
T Consensus 281 ~v~~nah~~sv~~~~fl~~epVl~ta~~DnSlk~~vfD~~dg~pR~LR~R~GHs~Pp~~ 339 (910)
T KOG1539|consen 281 NVTRNAHYGSVTGATFLPGEPVLVTAGADNSLKVWVFDSGDGVPRLLRSRGGHSAPPSC 339 (910)
T ss_pred eeeeccccCCcccceecCCCceEeeccCCCceeEEEeeCCCCcchheeeccCCCCCchh
Confidence 76666676778889999999999999999988887444 4433 3344455554433
No 167
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=99.81 E-value=5.1e-16 Score=126.52 Aligned_cols=204 Identities=42% Similarity=0.726 Sum_probs=167.4
Q ss_pred CCeEEEEE-CCCCC-EEEEEe-CCCeEEEEecCC-CeEEEEEecccCCeEEEEECCCCCEEEEEcC-CCeEEEEECCCce
Q psy4393 28 KAVSSVKF-SPNGE-WLASSS-ADKLIKIWGAYD-GKFEKTISGHKLGISDVAWSSDSRLLVSGSD-DKTLKIWELSSGK 102 (247)
Q Consensus 28 ~~v~~~~~-s~~~~-~l~~~~-~dg~v~iw~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~v~d~~~~~ 102 (247)
..+..+.+ ++++. .++..+ .|+.+.+|+... ......+..|...+..+.|+|++..++.++. ++.+++|+...+.
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (466)
T COG2319 110 SSVSKLALSSPDGNSILLASSSLDGTVKLWDLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGK 189 (466)
T ss_pred CceeeEEEECCCcceEEeccCCCCccEEEEEecCCCeEEEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCc
Confidence 36777777 88887 444434 489999999987 6777888889999999999999998888885 9999999999888
Q ss_pred EEEEEecCCccEEEEEEcCCCC-EEEEeeCCCCEEEEECCCCeEEE-eecCCCCCeEEEEECCCCCEEEEecCCCeEEEE
Q psy4393 103 CLKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVRTGKCLK-TLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 180 (247)
Q Consensus 103 ~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~~~~-~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~ 180 (247)
....+..|...+.++.|+|++. .+++++.|+.+++||...+..+. .+..|.... ...|+|++..+++++.++.+++|
T Consensus 190 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~ 268 (466)
T COG2319 190 PLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRSTLSGHSDSV-VSSFSPDGSLLASGSSDGTIRLW 268 (466)
T ss_pred eEEeeccCCCceEEEEEcCCcceEEEEecCCCcEEEEECCCCcEEeeecCCCCcce-eEeECCCCCEEEEecCCCcEEEe
Confidence 8888888899999999999988 55555899999999998777777 577776664 33899999888899999999999
Q ss_pred eCCCcee-eeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcceEEE
Q psy4393 181 DTASGQC-LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAII 233 (247)
Q Consensus 181 d~~~~~~-~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~ 233 (247)
+...... .... ..+...+..+.|+|++..+++++.|+.+++||.+.......
T Consensus 269 ~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 321 (466)
T COG2319 269 DLRSSSSLLRTL-SGHSSSVLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLSS 321 (466)
T ss_pred eecCCCcEEEEE-ecCCccEEEEEECCCCCEEEEeeCCCcEEEEEcCCCceEEE
Confidence 9987654 3333 44567889999999999999899999999998877654433
No 168
>KOG0307|consensus
Probab=99.80 E-value=3.1e-19 Score=152.15 Aligned_cols=208 Identities=23% Similarity=0.360 Sum_probs=161.7
Q ss_pred EEEecCCCCeEEEEECCCCC-EEEEEeCCCeEEEEecCCCeEEEEE--ecccCCeEEEEECCCCC-EEEEEcCCCeEEEE
Q psy4393 21 FTLAGHTKAVSSVKFSPNGE-WLASSSADKLIKIWGAYDGKFEKTI--SGHKLGISDVAWSSDSR-LLVSGSDDKTLKIW 96 (247)
Q Consensus 21 ~~~~~h~~~v~~~~~s~~~~-~l~~~~~dg~v~iw~~~~~~~~~~~--~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~v~ 96 (247)
.+...|++.|..+.|++... +||+|+.||.|.|||+.+.+..... ......|.+++|+..-+ .|++++.+|.+.+|
T Consensus 110 a~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iW 189 (1049)
T KOG0307|consen 110 ATKSKHTGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIW 189 (1049)
T ss_pred hhhcccCCceeeeeccccCCceeeccCCCCcEEEeccCCcCCCCCCCCCCCcccceEeccchhhhHHhhccCCCCCceec
Confidence 34567999999999999655 9999999999999998764332222 11345699999987544 56788889999999
Q ss_pred ECCCceEEEEEecCCc--cEEEEEEcCCC-CEEEEeeCCC---CEEEEECCCCe-EEEeecCCCCCeEEEEECCCC-CEE
Q psy4393 97 ELSSGKCLKTLKGHSN--YVFCCNFNPQS-NLIVSGSFDE---SVRIWDVRTGK-CLKTLPAHSDPVSAVHFNRDG-SLI 168 (247)
Q Consensus 97 d~~~~~~~~~~~~~~~--~v~~~~~~~~~-~~l~~~~~d~---~i~v~d~~~~~-~~~~~~~~~~~i~~~~~~~~~-~~l 168 (247)
|++..+.+..+..+.. .+..+.|+|+. ..+++++.|. .|.+||+|... +++.+..|...|.+|.|++.+ .+|
T Consensus 190 Dlr~~~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~assP~k~~~~H~~GilslsWc~~D~~ll 269 (1049)
T KOG0307|consen 190 DLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFASSPLKILEGHQRGILSLSWCPQDPRLL 269 (1049)
T ss_pred cccCCCcccccccCCCccceeeeeeCCCCceeeeeecCCCCCceeEeecccccCCchhhhcccccceeeeccCCCCchhh
Confidence 9998876666654443 36678999976 3455555544 49999998643 567778999999999999966 788
Q ss_pred EEecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCC-EEEEEEcCCeEEEEECCCcc
Q psy4393 169 VSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK-YILAATLDNTLKLWDSKVVT 229 (247)
Q Consensus 169 ~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~vwd~~~~~ 229 (247)
++++.|+.+..|+..+++.+..+.. ...-+..+.|.|... .+++++.||.|.||......
T Consensus 270 lSsgkD~~ii~wN~~tgEvl~~~p~-~~nW~fdv~w~pr~P~~~A~asfdgkI~I~sl~~~~ 330 (1049)
T KOG0307|consen 270 LSSGKDNRIICWNPNTGEVLGELPA-QGNWCFDVQWCPRNPSVMAAASFDGKISIYSLQGTD 330 (1049)
T ss_pred hcccCCCCeeEecCCCceEeeecCC-CCcceeeeeecCCCcchhhhheeccceeeeeeecCC
Confidence 9999999999999999998877654 233467789999877 77888999999999876554
No 169
>KOG1523|consensus
Probab=99.80 E-value=1.9e-17 Score=123.70 Aligned_cols=203 Identities=18% Similarity=0.282 Sum_probs=161.5
Q ss_pred CCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCC---eEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEEC-CCc
Q psy4393 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG---KFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWEL-SSG 101 (247)
Q Consensus 26 h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~-~~~ 101 (247)
-.++|+|.+|++|+..+|.+..+..|.||..... +....++.|...|+.+.|.|..+.|++++.|..-++|.. +.+
T Consensus 9 ~~~pitchAwn~drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~~~~ 88 (361)
T KOG1523|consen 9 LLEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPSGG 88 (361)
T ss_pred ccCceeeeeecCCCceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCCCccccccCCCC
Confidence 4689999999999999999999999999987654 355678889999999999999999999999999999998 443
Q ss_pred e--EEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEE----eecCCCCCeEEEEECCCCCEEEEecCCC
Q psy4393 102 K--CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLK----TLPAHSDPVSAVHFNRDGSLIVSSSYDG 175 (247)
Q Consensus 102 ~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~----~~~~~~~~i~~~~~~~~~~~l~~~~~dg 175 (247)
+ ....+..+...+.++.|+|.++.|++|+..+.|.||=.+....-. .-+.+...|+++.|+|++-+|++|+.|+
T Consensus 89 ~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnVLlaaGs~D~ 168 (361)
T KOG1523|consen 89 TWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNVLLAAGSTDG 168 (361)
T ss_pred eeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEecccceehhhhhCCccccceeeeeccCCcceecccccCc
Confidence 3 333445566778999999999999999999999988776543221 1234567799999999999999999999
Q ss_pred eEEEEeCCCce------------------eeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcc
Q psy4393 176 LCRIWDTASGQ------------------CLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVT 229 (247)
Q Consensus 176 ~i~v~d~~~~~------------------~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~ 229 (247)
..++|...-.. ....+ ....+-+..+.|+|+|..|+-.+.|..+.+-|.....
T Consensus 169 k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~-~~~ggwvh~v~fs~sG~~lawv~Hds~v~~~da~~p~ 239 (361)
T KOG1523|consen 169 KCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEA-SSSGGWVHGVLFSPSGNRLAWVGHDSTVSFVDAAGPS 239 (361)
T ss_pred ceeEEEEeeeccccCCCCCCCccCCcHHHHHHhh-ccCCCceeeeEeCCCCCEeeEecCCCceEEeecCCCc
Confidence 99998643211 00000 1223457889999999999999999999999976654
No 170
>KOG1009|consensus
Probab=99.80 E-value=1.4e-17 Score=127.98 Aligned_cols=121 Identities=35% Similarity=0.610 Sum_probs=102.2
Q ss_pred EEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecC--------C--------CeEEEEEecccCCeEEEEECCCCCEE
Q psy4393 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY--------D--------GKFEKTISGHKLGISDVAWSSDSRLL 84 (247)
Q Consensus 21 ~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~--------~--------~~~~~~~~~~~~~v~~~~~~~~~~~l 84 (247)
-.+..|...|+++.|+|+|++||+|+.+|.+.+|-.. + ......+.+|...+.+++|+|++.++
T Consensus 59 s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l 138 (434)
T KOG1009|consen 59 SSLSRHTRAVNVVRFSPDGELLASGGDGGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFL 138 (434)
T ss_pred ecccCCcceeEEEEEcCCcCeeeecCCCceEEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCcee
Confidence 3467899999999999999999999999999999654 2 11234466788889999999999999
Q ss_pred EEEcCCCeEEEEECCCceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECC
Q psy4393 85 VSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141 (247)
Q Consensus 85 ~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~ 141 (247)
++++-|..+++||+..|+....+..|...+..++|.|-++++++-+.|+..+.+.+.
T Consensus 139 ~s~s~dns~~l~Dv~~G~l~~~~~dh~~yvqgvawDpl~qyv~s~s~dr~~~~~~~~ 195 (434)
T KOG1009|consen 139 VSGSVDNSVRLWDVHAGQLLAILDDHEHYVQGVAWDPLNQYVASKSSDRHPEGFSAK 195 (434)
T ss_pred eeeeccceEEEEEeccceeEeeccccccccceeecchhhhhhhhhccCcccceeeee
Confidence 999999999999999999988888888888888898888888877777766655554
No 171
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.80 E-value=4e-17 Score=134.43 Aligned_cols=194 Identities=19% Similarity=0.172 Sum_probs=133.8
Q ss_pred EecCCCCeEEEEECCCCCEEEEEeCC---CeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEc-CCCeEEE--E
Q psy4393 23 LAGHTKAVSSVKFSPNGEWLASSSAD---KLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGS-DDKTLKI--W 96 (247)
Q Consensus 23 ~~~h~~~v~~~~~s~~~~~l~~~~~d---g~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~v--~ 96 (247)
+..|...+.+++|+|||+.|+.++.+ ..|++||..+++.... .........++|+|||+.|+.+. .+|.+.+ |
T Consensus 199 lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l-~~~~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~ 277 (429)
T PRK01742 199 VNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVV-ASFRGHNGAPAFSPDGSRLAFASSKDGVLNIYVM 277 (429)
T ss_pred eccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEE-ecCCCccCceeECCCCCEEEEEEecCCcEEEEEE
Confidence 44677789999999999999876543 3699999977654322 22223345689999999888764 5776554 5
Q ss_pred ECCCceEEEEEecCCccEEEEEEcCCCCEEEEee-CCCCEEEEECCCCe-EEEeecCCCCCeEEEEECCCCCEEEEecCC
Q psy4393 97 ELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS-FDESVRIWDVRTGK-CLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 174 (247)
Q Consensus 97 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~v~d~~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 174 (247)
|+.++.. ..+..+...+....|+|+++.++..+ .++..++|++.... ....+ .+.. ....|+|+|+.++..+.+
T Consensus 278 d~~~~~~-~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~~~l-~~~~--~~~~~SpDG~~ia~~~~~ 353 (429)
T PRK01742 278 GANGGTP-SQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGASLV-GGRG--YSAQISADGKTLVMINGD 353 (429)
T ss_pred ECCCCCe-EeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCeEEe-cCCC--CCccCCCCCCEEEEEcCC
Confidence 6665553 44555555677889999999877654 56778888764322 22222 2332 456899999999888766
Q ss_pred CeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEEC
Q psy4393 175 GLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225 (247)
Q Consensus 175 g~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~ 225 (247)
+ +.+||+.+++... +... .....+.|+|||++|+.++.+|.+.+|+.
T Consensus 354 ~-i~~~Dl~~g~~~~-lt~~--~~~~~~~~sPdG~~i~~~s~~g~~~~l~~ 400 (429)
T PRK01742 354 N-VVKQDLTSGSTEV-LSST--FLDESPSISPNGIMIIYSSTQGLGKVLQL 400 (429)
T ss_pred C-EEEEECCCCCeEE-ecCC--CCCCCceECCCCCEEEEEEcCCCceEEEE
Confidence 5 5569998876432 2111 12245789999999999999998888875
No 172
>KOG4378|consensus
Probab=99.79 E-value=1.5e-17 Score=130.93 Aligned_cols=186 Identities=23% Similarity=0.353 Sum_probs=151.6
Q ss_pred EEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccC-CeEEEEECCCCCE-EEEEcCCCeEEEEECC
Q psy4393 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKL-GISDVAWSSDSRL-LVSGSDDKTLKIWELS 99 (247)
Q Consensus 22 ~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~-l~~~~~d~~i~v~d~~ 99 (247)
.+++|...|+++.+.-...+||+++..|.|.+....++.....+....+ .|.-+.++|..+. |.+++.+|.|.+||+.
T Consensus 116 ~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f~~~sgqsvRll~ys~skr~lL~~asd~G~VtlwDv~ 195 (673)
T KOG4378|consen 116 FLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTFTIDSGQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQ 195 (673)
T ss_pred hccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCccccceecCCCCeEEEeecccccceeeEeeccCCeEEEEecc
Confidence 4578999999999999999999999999999999887776666654433 3667899997665 5678999999999997
Q ss_pred CceEEEE-EecCCccEEEEEEcCCC-CEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCCCeE
Q psy4393 100 SGKCLKT-LKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 177 (247)
Q Consensus 100 ~~~~~~~-~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i 177 (247)
....... ...|..+...++|+|.. .+|++.+-|..|.+||.+.......+. ...|.+.++|.++|.+|++|...|.+
T Consensus 196 g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~~~l~-y~~Plstvaf~~~G~~L~aG~s~G~~ 274 (673)
T KOG4378|consen 196 GMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQASTDRLT-YSHPLSTVAFSECGTYLCAGNSKGEL 274 (673)
T ss_pred CCCcccchhhhccCCcCcceecCCccceEEEecccceEEEeecccccccceee-ecCCcceeeecCCceEEEeecCCceE
Confidence 6554433 35688888899999955 567888999999999999776655554 35688999999999999999999999
Q ss_pred EEEeCCCceeeeeeccCCCCCeEEEEECCCC
Q psy4393 178 RIWDTASGQCLKTLIDDDNPPVSFVKFSPNG 208 (247)
Q Consensus 178 ~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~ 208 (247)
..||++..+........+...|++++|-|..
T Consensus 275 i~YD~R~~k~Pv~v~sah~~sVt~vafq~s~ 305 (673)
T KOG4378|consen 275 IAYDMRSTKAPVAVRSAHDASVTRVAFQPSP 305 (673)
T ss_pred EEEecccCCCCceEeeecccceeEEEeeecc
Confidence 9999998765555555666779999998864
No 173
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=99.79 E-value=9.4e-16 Score=124.93 Aligned_cols=208 Identities=40% Similarity=0.771 Sum_probs=168.1
Q ss_pred EEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCe-EEEEEeccc-CCeEEEEE-CCCCC-EEEEEcC-CCeEEEE
Q psy4393 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-FEKTISGHK-LGISDVAW-SSDSR-LLVSGSD-DKTLKIW 96 (247)
Q Consensus 22 ~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~-~~~~~~~~~-~~v~~~~~-~~~~~-~l~~~~~-d~~i~v~ 96 (247)
....|...+.++.|.+.+..++.++.++.+.+|+..... ....+.... ..+..+.+ .+++. .++..+. ++.+.+|
T Consensus 60 ~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 139 (466)
T COG2319 60 LLRGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVSKLALSSPDGNSILLASSSLDGTVKLW 139 (466)
T ss_pred eeeeccceEEEEEECCCCcEEEEecCCCcEEEEEcCCCceeEEEEeccCCCceeeEEEECCCcceEEeccCCCCccEEEE
Confidence 345789999999999999999999899999999988775 555555533 35677766 78877 4555444 8999999
Q ss_pred ECCC-ceEEEEEecCCccEEEEEEcCCCCEEEEeeC-CCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCC-EEEEecC
Q psy4393 97 ELSS-GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF-DESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGS-LIVSSSY 173 (247)
Q Consensus 97 d~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~ 173 (247)
+... ......+..|...+..+.++|++..++.++. ++.+++|++..+..+..+..|...+.+++|+|++. .+++++.
T Consensus 140 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 219 (466)
T COG2319 140 DLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSS 219 (466)
T ss_pred EecCCCeEEEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeeccCCCceEEEEEcCCcceEEEEecC
Confidence 9987 6777788889999999999999998888875 99999999998888888888999999999999998 5555589
Q ss_pred CCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcce
Q psy4393 174 DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTP 230 (247)
Q Consensus 174 dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~ 230 (247)
|+.+.+||...+.........+.... ...|+|++.++++++.|+.+++||.+....
T Consensus 220 d~~i~~wd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 275 (466)
T COG2319 220 DGTIRLWDLSTGKLLRSTLSGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSSS 275 (466)
T ss_pred CCcEEEEECCCCcEEeeecCCCCcce-eEeECCCCCEEEEecCCCcEEEeeecCCCc
Confidence 99999999886666553233333332 227999999999999999999999987664
No 174
>KOG0268|consensus
Probab=99.79 E-value=1.1e-18 Score=132.24 Aligned_cols=168 Identities=25% Similarity=0.438 Sum_probs=132.1
Q ss_pred eEEEEEecccCCeEEEEECCCC-CEEEEEcCCCeEEEEECCCceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEE
Q psy4393 60 KFEKTISGHKLGISDVAWSSDS-RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138 (247)
Q Consensus 60 ~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~ 138 (247)
..+..+.+|..+|.+++=+|.. ..+++|+.||.|++||+.+..+...+++|.+.|..+++.. ..+++++.|.+|+.|
T Consensus 57 PFv~~L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~--~~~~tvgdDKtvK~w 134 (433)
T KOG0268|consen 57 PFVGSLDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRECIRTFKAHEGLVRGICVTQ--TSFFTVGDDKTVKQW 134 (433)
T ss_pred cchhhccccccccchhhcCcchhhhhhccccCceEEEEehhhhhhhheeecccCceeeEEecc--cceEEecCCcceeee
Confidence 3455678899999999999976 6799999999999999999999999999999999998876 567777788877777
Q ss_pred ECC--------------------------------------CCeEEEeecCCCCCeEEEEECCCCC-EEEEecCCCeEEE
Q psy4393 139 DVR--------------------------------------TGKCLKTLPAHSDPVSAVHFNRDGS-LIVSSSYDGLCRI 179 (247)
Q Consensus 139 d~~--------------------------------------~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~v 179 (247)
-+. ...++..+......+.++.|+|... .|++|+.|+.|.+
T Consensus 135 k~~~~p~~tilg~s~~~gIdh~~~~~~FaTcGe~i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas~~sDrsIvL 214 (433)
T KOG0268|consen 135 KIDGPPLHTILGKSVYLGIDHHRKNSVFATCGEQIDIWDEQRDNPVSSMSWGADSISSVKFNPVETSILASCASDRSIVL 214 (433)
T ss_pred eccCCcceeeeccccccccccccccccccccCceeeecccccCCccceeecCCCceeEEecCCCcchheeeeccCCceEE
Confidence 532 2223334444445678888998665 5677779999999
Q ss_pred EeCCCceeeeeec-----------------------------------------cCCCCCeEEEEECCCCCEEEEEEcCC
Q psy4393 180 WDTASGQCLKTLI-----------------------------------------DDDNPPVSFVKFSPNGKYILAATLDN 218 (247)
Q Consensus 180 ~d~~~~~~~~~~~-----------------------------------------~~~~~~v~~~~~s~~~~~l~~~~~dg 218 (247)
||++.+++++.+. ..+...|..++|||.|+-+++|+.|.
T Consensus 215 yD~R~~~Pl~KVi~~mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdfsptG~EfvsgsyDk 294 (433)
T KOG0268|consen 215 YDLRQASPLKKVILTMRTNTICWNPEAFNFVAANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDFSPTGQEFVSGSYDK 294 (433)
T ss_pred EecccCCccceeeeeccccceecCccccceeeccccccceehhhhhhcccchhhcccceeEEEeccCCCcchhccccccc
Confidence 9999876654321 12334678899999999999999999
Q ss_pred eEEEEECCCcc
Q psy4393 219 TLKLWDSKVVT 229 (247)
Q Consensus 219 ~i~vwd~~~~~ 229 (247)
+|+||..+.+.
T Consensus 295 sIRIf~~~~~~ 305 (433)
T KOG0268|consen 295 SIRIFPVNHGH 305 (433)
T ss_pred eEEEeecCCCc
Confidence 99999987654
No 175
>KOG1445|consensus
Probab=99.79 E-value=7e-18 Score=136.54 Aligned_cols=212 Identities=22% Similarity=0.338 Sum_probs=164.5
Q ss_pred EEecCCCCeEEEEECC-CCCEEEEEeCCCeEEEEecCCCeEE------EEEecccCCeEEEEECCCCCEEEEEcCCCeEE
Q psy4393 22 TLAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFE------KTISGHKLGISDVAWSSDSRLLVSGSDDKTLK 94 (247)
Q Consensus 22 ~~~~h~~~v~~~~~s~-~~~~l~~~~~dg~v~iw~~~~~~~~------~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 94 (247)
.+.+|...|+.+.|+| +..+||+|+.|..|+||.+..+... ..+.+....+.++.|+|...-|+..+..|.++
T Consensus 74 ~l~~H~d~VtDl~FspF~D~LLAT~S~D~~VKiW~lp~g~~q~LSape~~~g~~~~~vE~l~fHpTaDgil~s~a~g~v~ 153 (1012)
T KOG1445|consen 74 ILAAHGDQVTDLGFSPFADELLATCSRDEPVKIWKLPRGHSQKLSAPEIDVGGGNVIVECLRFHPTADGILASGAHGSVY 153 (1012)
T ss_pred eeecccceeeccCccccchhhhhcccCCCeeEEEecCCCcccccCCcceeecCCceEEEEeecccCcCceEEeccCceEE
Confidence 4568999999999999 5668899999999999998744322 12334455688999999776677777889999
Q ss_pred EEECCCceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCC-CeEEEeecCCCCC-eEEEEECCCCCEEEEec
Q psy4393 95 IWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT-GKCLKTLPAHSDP-VSAVHFNRDGSLIVSSS 172 (247)
Q Consensus 95 v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~-~~~~~~~~~~~~~-i~~~~~~~~~~~l~~~~ 172 (247)
+||+.+++....+.+|.+.|.++.|+.||.++++.+.|..|++||.+. ++.++....|.+. -..+.|.-+-..|++.+
T Consensus 154 i~D~stqk~~~el~~h~d~vQSa~WseDG~llatscKdkqirifDPRa~~~piQ~te~H~~~rdsRv~w~Gn~~rlisTG 233 (1012)
T KOG1445|consen 154 ITDISTQKTAVELSGHTDKVQSADWSEDGKLLATSCKDKQIRIFDPRASMEPIQTTEGHGGMRDSRVLWAGNWERLISTG 233 (1012)
T ss_pred EEEcccCceeecccCCchhhhccccccCCceEeeecCCcceEEeCCccCCCccccccccccchhheeeeccchhhhhhcc
Confidence 999999999999999999999999999999999999999999999985 4556666677542 23456766555676666
Q ss_pred CC----CeEEEEeCCCc-eeeeeeccCCCCCeEEEEECCCCCEEEEEE-cCCeEEEEECCCcceEEE
Q psy4393 173 YD----GLCRIWDTASG-QCLKTLIDDDNPPVSFVKFSPNGKYILAAT-LDNTLKLWDSKVVTPAII 233 (247)
Q Consensus 173 ~d----g~i~v~d~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~vwd~~~~~~~~~ 233 (247)
.+ ..+++||.+.. ...+++.......+..-.|+||.++|+.++ .++++..+++.+.+|.++
T Consensus 234 F~~~R~reV~~~Dtr~f~~p~~tleld~stGvLiPl~DpDt~llfLaGKG~~~l~~lE~~d~qPyLs 300 (1012)
T KOG1445|consen 234 FTTKRIREVRAYDTRKFGAPVHTLELDSSTGVLIPLYDPDTRLLFLAGKGTNKLFMLEMQDRQPYLS 300 (1012)
T ss_pred cchhhheeeeeeeccccCCcceeEEeecccceEeeeecCCCceEEEecCCcceEEEEEecCCCcchh
Confidence 54 47899998763 344454444455566667999999887665 578999999998888765
No 176
>KOG2110|consensus
Probab=99.78 E-value=5.7e-16 Score=117.93 Aligned_cols=193 Identities=20% Similarity=0.286 Sum_probs=146.2
Q ss_pred eEEEEECCCCCEEEEEeCC--CeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceEEEEE
Q psy4393 30 VSSVKFSPNGEWLASSSAD--KLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTL 107 (247)
Q Consensus 30 v~~~~~s~~~~~l~~~~~d--g~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~ 107 (247)
|..+-|+ ..++|..+.+ ..+++++...+...+.+. ...+|.++.++. ++|+++-++. |++||+++-+.++++
T Consensus 49 IvEmLFS--SSLvaiV~~~qpr~Lkv~~~Kk~~~ICe~~-fpt~IL~VrmNr--~RLvV~Lee~-IyIydI~~MklLhTI 122 (391)
T KOG2110|consen 49 IVEMLFS--SSLVAIVSIKQPRKLKVVHFKKKTTICEIF-FPTSILAVRMNR--KRLVVCLEES-IYIYDIKDMKLLHTI 122 (391)
T ss_pred EEEeecc--cceeEEEecCCCceEEEEEcccCceEEEEe-cCCceEEEEEcc--ceEEEEEccc-EEEEecccceeehhh
Confidence 4444454 3455554443 347777776665555554 345687887764 4566665554 999999998888776
Q ss_pred ecC---CccEEEEEEcCCCCEEEEee--CCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCCCe-EEEEe
Q psy4393 108 KGH---SNYVFCCNFNPQSNLIVSGS--FDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGL-CRIWD 181 (247)
Q Consensus 108 ~~~---~~~v~~~~~~~~~~~l~~~~--~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~-i~v~d 181 (247)
..- ...+.++..++.+.+++.-+ ..|.|.+||+.+-+.+..+.+|.+++.+++|+++|.+||+++..|+ |+||.
T Consensus 123 ~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~nl~~v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~ 202 (391)
T KOG2110|consen 123 ETTPPNPKGLCALSPNNANCYLAYPGSTTSGDVVLFDTINLQPVNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFS 202 (391)
T ss_pred hccCCCccceEeeccCCCCceEEecCCCCCceEEEEEcccceeeeEEEecCCceeEEEECCCCCEEEEeccCceEEEEEE
Confidence 533 33455566666667888753 4688999999999999999999999999999999999999999995 79999
Q ss_pred CCCceeeeeeccCC-CCCeEEEEECCCCCEEEEEEcCCeEEEEECCCc
Q psy4393 182 TASGQCLKTLIDDD-NPPVSFVKFSPNGKYILAATLDNTLKLWDSKVV 228 (247)
Q Consensus 182 ~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~ 228 (247)
+.+++.+..+..+- ...|..++|+||+++|++.+..++|+||.+...
T Consensus 203 v~~G~kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~TeTVHiFKL~~~ 250 (391)
T KOG2110|consen 203 VPEGQKLYEFRRGTYPVSIYSLSFSPDSQFLAASSNTETVHIFKLEKV 250 (391)
T ss_pred cCCccEeeeeeCCceeeEEEEEEECCCCCeEEEecCCCeEEEEEeccc
Confidence 99999887775443 345788999999999999999999999987654
No 177
>KOG3881|consensus
Probab=99.78 E-value=1.9e-16 Score=121.31 Aligned_cols=200 Identities=17% Similarity=0.275 Sum_probs=154.0
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCe----EEEEEecccCCeEEEEECCCCCE-EEEEcCC--CeEEEEECC
Q psy4393 27 TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK----FEKTISGHKLGISDVAWSSDSRL-LVSGSDD--KTLKIWELS 99 (247)
Q Consensus 27 ~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d--~~i~v~d~~ 99 (247)
+++|..++.. ...|++|-.+|.+++|....+. ....+.. ..++..+.-++.... +++|+.. ..+.+||++
T Consensus 105 ~~~I~gl~~~--dg~Litc~~sG~l~~~~~k~~d~hss~l~~la~-g~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle 181 (412)
T KOG3881|consen 105 TKSIKGLKLA--DGTLITCVSSGNLQVRHDKSGDLHSSKLIKLAT-GPGLYDVRQTDTDPYIVATGGKENINELKIWDLE 181 (412)
T ss_pred cccccchhhc--CCEEEEEecCCcEEEEeccCCccccccceeeec-CCceeeeccCCCCCceEecCchhcccceeeeecc
Confidence 4555555543 3357788899999999876322 2223332 245666666665444 5568887 789999999
Q ss_pred CceEEEEEecCC---------ccEEEEEEcCC--CCEEEEeeCCCCEEEEECCCCe-EEEeecCCCCCeEEEEECCCCCE
Q psy4393 100 SGKCLKTLKGHS---------NYVFCCNFNPQ--SNLIVSGSFDESVRIWDVRTGK-CLKTLPAHSDPVSAVHFNRDGSL 167 (247)
Q Consensus 100 ~~~~~~~~~~~~---------~~v~~~~~~~~--~~~l~~~~~d~~i~v~d~~~~~-~~~~~~~~~~~i~~~~~~~~~~~ 167 (247)
+.+.+..-+.-. -.+..+.|-+. ...|++++.-+.+++||.+.++ ++..+...+.+++++...|++++
T Consensus 182 ~~~qiw~aKNvpnD~L~LrVPvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E~~is~~~l~p~gn~ 261 (412)
T KOG3881|consen 182 QSKQIWSAKNVPNDRLGLRVPVWITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRRPVAQFDFLENPISSTGLTPSGNF 261 (412)
T ss_pred cceeeeeccCCCCccccceeeeeeccceecCCCCCceEEEEecceeEEEecCcccCcceeEeccccCcceeeeecCCCcE
Confidence 875444333211 12445678777 8899999999999999998664 67777777889999999999999
Q ss_pred EEEecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcc
Q psy4393 168 IVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVT 229 (247)
Q Consensus 168 l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~ 229 (247)
+++|...|.+..||++.++.....+....+.+..+..+|.+++|++++.|..|||+|.++..
T Consensus 262 Iy~gn~~g~l~~FD~r~~kl~g~~~kg~tGsirsih~hp~~~~las~GLDRyvRIhD~ktrk 323 (412)
T KOG3881|consen 262 IYTGNTKGQLAKFDLRGGKLLGCGLKGITGSIRSIHCHPTHPVLASCGLDRYVRIHDIKTRK 323 (412)
T ss_pred EEEecccchhheecccCceeeccccCCccCCcceEEEcCCCceEEeeccceeEEEeecccch
Confidence 99999999999999999998877677777889999999999999999999999999998843
No 178
>KOG1007|consensus
Probab=99.77 E-value=2.9e-17 Score=121.29 Aligned_cols=203 Identities=23% Similarity=0.357 Sum_probs=146.4
Q ss_pred EecCCCCeEEEEECCCCC-EEEEEeCC-------CeEEEEecCCCe---------EEEEEe-cccCCeEEEEECCCCCEE
Q psy4393 23 LAGHTKAVSSVKFSPNGE-WLASSSAD-------KLIKIWGAYDGK---------FEKTIS-GHKLGISDVAWSSDSRLL 84 (247)
Q Consensus 23 ~~~h~~~v~~~~~s~~~~-~l~~~~~d-------g~v~iw~~~~~~---------~~~~~~-~~~~~v~~~~~~~~~~~l 84 (247)
+.-|.+.|..++-+|-.+ .|+++..+ -...||.+.... .+..+. .+-+.+.++.|.|++..+
T Consensus 59 f~h~agEvw~las~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S~~~tlE~v~~Ldteavg~i~cvew~Pns~kl 138 (370)
T KOG1007|consen 59 FFHHAGEVWDLASSPFDQRILATVYNDTSDSGVLTGAAIWQIPEPLGQSNSSTLECVASLDTEAVGKINCVEWEPNSDKL 138 (370)
T ss_pred hhcCCcceehhhcCCCCCceEEEEEeccCCCcceeeEEEEecccccCccccchhhHhhcCCHHHhCceeeEEEcCCCCee
Confidence 334678999999999555 55555432 246789875422 112222 344579999999999998
Q ss_pred EEEcCCCeEEEEECCCceE-EEEEe-----cCCccEEEEEEcC--CCCEEEEeeCCCCEEEEECCCCeEEEee-cCCCCC
Q psy4393 85 VSGSDDKTLKIWELSSGKC-LKTLK-----GHSNYVFCCNFNP--QSNLIVSGSFDESVRIWDVRTGKCLKTL-PAHSDP 155 (247)
Q Consensus 85 ~~~~~d~~i~v~d~~~~~~-~~~~~-----~~~~~v~~~~~~~--~~~~l~~~~~d~~i~v~d~~~~~~~~~~-~~~~~~ 155 (247)
++-. +..|.+|++..+.. +..+. ++.....+-.|+| +++.+++. .|+++..||+|+......+ .+|...
T Consensus 139 asm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt-~d~tl~~~D~RT~~~~~sI~dAHgq~ 216 (370)
T KOG1007|consen 139 ASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATT-SDSTLQFWDLRTMKKNNSIEDAHGQR 216 (370)
T ss_pred EEec-cCceEEEEcccCcchheeecccccccccceecccccCCCCccceEEEe-CCCcEEEEEccchhhhcchhhhhcce
Confidence 8775 77899999987654 33332 1233455667887 67777664 5889999999987655444 578888
Q ss_pred eEEEEECCCCC-EEEEecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCC-CCEEEEEEcCCeEEEEECCC
Q psy4393 156 VSAVHFNRDGS-LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPN-GKYILAATLDNTLKLWDSKV 227 (247)
Q Consensus 156 i~~~~~~~~~~-~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~vwd~~~ 227 (247)
+..+.|+|+.+ +|++|+.||.|++||.+..+....-..++.--+.++.|+|. .+++++++.|..|.+|....
T Consensus 217 vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~HsHWvW~VRfn~~hdqLiLs~~SDs~V~Lsca~s 290 (370)
T KOG1007|consen 217 VRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPGHSHWVWAVRFNPEHDQLILSGGSDSAVNLSCASS 290 (370)
T ss_pred eeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccCCCceEEEEEEecCccceEEEecCCCceeEEEeccc
Confidence 99999999876 67889999999999999766443334455667889999985 46777899999999998654
No 179
>KOG1034|consensus
Probab=99.77 E-value=1.4e-16 Score=119.59 Aligned_cols=169 Identities=26% Similarity=0.512 Sum_probs=132.8
Q ss_pred CCCceEEEEE-ecCCCCeEEEEECC----CC-CEEEEEeCCCeEEEEecCCCe---EEEEEe--cccCCeEEEEECCC--
Q psy4393 14 KPNYVLKFTL-AGHTKAVSSVKFSP----NG-EWLASSSADKLIKIWGAYDGK---FEKTIS--GHKLGISDVAWSSD-- 80 (247)
Q Consensus 14 ~~~~~~~~~~-~~h~~~v~~~~~s~----~~-~~l~~~~~dg~v~iw~~~~~~---~~~~~~--~~~~~v~~~~~~~~-- 80 (247)
++.|...-.+ .+|..+|..++|.+ +. ..+++++ ...+.+|...... ..+... .++.....++|+-+
T Consensus 24 k~~yk~t~~l~ed~~~~I~gv~fN~~~~~~e~~vfatvG-~~rvtiy~c~~d~~ir~lq~y~D~d~~Esfytcsw~yd~~ 102 (385)
T KOG1034|consen 24 KRSYKYTNHLKEDHNKPIFGVAFNSFLGCDEPQVFATVG-GNRVTIYECPGDGGIRLLQSYADEDHDESFYTCSWSYDSN 102 (385)
T ss_pred ccceEeeeehhccCCCccceeeeehhcCCCCCceEEEeC-CcEEEEEEECCccceeeeeeccCCCCCcceEEEEEEecCC
Confidence 4445544444 36889999999985 12 2455554 3467888764322 222222 24555777888754
Q ss_pred --CCEEEEEcCCCeEEEEECCCceEEEEEecCCccEEEEEEcCCC-CEEEEeeCCCCEEEEECCCCeEEEee---cCCCC
Q psy4393 81 --SRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVRTGKCLKTL---PAHSD 154 (247)
Q Consensus 81 --~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~v~d~~~~~~~~~~---~~~~~ 154 (247)
.-++++++.-|.|++.|+.++++...+.+|...|..+.+.|+. +++++++.|..|++|++++..++..+ ..|.+
T Consensus 103 ~~~p~la~~G~~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrd 182 (385)
T KOG1034|consen 103 TGNPFLAAGGYLGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRD 182 (385)
T ss_pred CCCeeEEeecceeEEEEEecchhhhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEecccccccC
Confidence 3368888899999999999999999999999999999999965 68899999999999999999998886 47888
Q ss_pred CeEEEEECCCCCEEEEecCCCeEEEEeCC
Q psy4393 155 PVSAVHFNRDGSLIVSSSYDGLCRIWDTA 183 (247)
Q Consensus 155 ~i~~~~~~~~~~~l~~~~~dg~i~v~d~~ 183 (247)
.|.++.|+++|.++++++.|-++.+|++.
T Consensus 183 eVLSvD~~~~gd~i~ScGmDhslk~W~l~ 211 (385)
T KOG1034|consen 183 EVLSVDFSLDGDRIASCGMDHSLKLWRLN 211 (385)
T ss_pred cEEEEEEcCCCCeeeccCCcceEEEEecC
Confidence 99999999999999999999999999987
No 180
>KOG0644|consensus
Probab=99.77 E-value=7.5e-19 Score=145.70 Aligned_cols=202 Identities=31% Similarity=0.516 Sum_probs=165.1
Q ss_pred EecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCce
Q psy4393 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGK 102 (247)
Q Consensus 23 ~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~ 102 (247)
+-+|...|+|++|...|.++++|+.|..++||.+++..+.....+|.+.+++++.+....++++++.|..|++|.+.++.
T Consensus 186 LlgH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~~~~ 265 (1113)
T KOG0644|consen 186 LLGHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLPDGA 265 (1113)
T ss_pred HHhhhhheeeeeeccccceEeecCccceeeeeeccchhhhccCCCCccccchhccchhhhhhhhcccCceEEEEecCCCc
Confidence 34799999999999999999999999999999999999999999999999999999888899999999999999999999
Q ss_pred EEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCC----------------------------------------
Q psy4393 103 CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT---------------------------------------- 142 (247)
Q Consensus 103 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~---------------------------------------- 142 (247)
.+..+++|.+.|.+++|+|-. +.+.||++++||.+-
T Consensus 266 pvsvLrghtgavtaiafsP~~----sss~dgt~~~wd~r~~~~~y~prp~~~~~~~~~~s~~~~~~~~~f~Tgs~d~ea~ 341 (1113)
T KOG0644|consen 266 PVSVLRGHTGAVTAIAFSPRA----SSSDDGTCRIWDARLEPRIYVPRPLKFTEKDLVDSILFENNGDRFLTGSRDGEAR 341 (1113)
T ss_pred hHHHHhccccceeeeccCccc----cCCCCCceEeccccccccccCCCCCCcccccceeeeeccccccccccccCCcccc
Confidence 999999999999999999953 667788888888761
Q ss_pred -------------------------------------------CeEEEeecCCCCCeEEEEECCCCC-EEEEecCCCeEE
Q psy4393 143 -------------------------------------------GKCLKTLPAHSDPVSAVHFNRDGS-LIVSSSYDGLCR 178 (247)
Q Consensus 143 -------------------------------------------~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~ 178 (247)
|........|...+..+.++|-+. ...+++.||...
T Consensus 342 n~e~~~l~~~~~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~~g~l~H~l~ghsd~~yvLd~Hpfn~ri~msag~dgst~ 421 (1113)
T KOG0644|consen 342 NHEFEQLAWRSNLLIFVTRSSDLSSIVVTARNDHRLCVWNLYTGQLLHNLMGHSDEVYVLDVHPFNPRIAMSAGYDGSTI 421 (1113)
T ss_pred cchhhHhhhhccceEEEeccccccccceeeeeeeEeeeeecccchhhhhhcccccceeeeeecCCCcHhhhhccCCCceE
Confidence 000011112334455666777443 456788999999
Q ss_pred EEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcc
Q psy4393 179 IWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVT 229 (247)
Q Consensus 179 v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~ 229 (247)
|||+-.+..++.+...+ ..+...+||+||+.++....-|.+.|...-..+
T Consensus 422 iwdi~eg~pik~y~~gh-~kl~d~kFSqdgts~~lsd~hgql~i~g~gqs~ 471 (1113)
T KOG0644|consen 422 IWDIWEGIPIKHYFIGH-GKLVDGKFSQDGTSIALSDDHGQLYILGTGQSK 471 (1113)
T ss_pred eeecccCCcceeeeccc-ceeeccccCCCCceEecCCCCCceEEeccCCCc
Confidence 99999888777776553 455667899999999999888999998765443
No 181
>KOG1310|consensus
Probab=99.77 E-value=1.3e-17 Score=132.85 Aligned_cols=221 Identities=23% Similarity=0.390 Sum_probs=164.3
Q ss_pred ceEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEE-ecccCCeEEEEECC--CCCEEEEEcCCCeE
Q psy4393 17 YVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKLGISDVAWSS--DSRLLVSGSDDKTL 93 (247)
Q Consensus 17 ~~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~-~~~~~~v~~~~~~~--~~~~l~~~~~d~~i 93 (247)
..+...+.||++=|.++.|+.+|.+|++|+.|-.+.|||....+....+ .+|...|.++.|-| +.+.+++|..|..|
T Consensus 40 L~lE~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i 119 (758)
T KOG1310|consen 40 LDLEAELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLI 119 (758)
T ss_pred cchhhhhccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceE
Confidence 3455677899999999999999999999999999999999877777665 57888899999998 45678999999999
Q ss_pred EEEECCCce----------EEEEEecCCccEEEEEEcCCC-CEEEEeeCCCCEEEEECCCCeE-EEee---------cCC
Q psy4393 94 KIWELSSGK----------CLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVRTGKC-LKTL---------PAH 152 (247)
Q Consensus 94 ~v~d~~~~~----------~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~v~d~~~~~~-~~~~---------~~~ 152 (247)
+++|+...+ .......|...|..++-.|++ +.+.++++||.++-+|++.... .... ...
T Consensus 120 ~lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~~~~l~ny~~~ 199 (758)
T KOG1310|consen 120 KLFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDCPSILVNYNPQ 199 (758)
T ss_pred EEEecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCccccccHHHHHhchh
Confidence 999997421 223344566677777888877 7899999999999999986321 1111 011
Q ss_pred CCCeEEEEECCCC-CEEEEecCCCeEEEEeCCCc--------e----------eeeeeccCC-----------CCCeEEE
Q psy4393 153 SDPVSAVHFNRDG-SLIVSSSYDGLCRIWDTASG--------Q----------CLKTLIDDD-----------NPPVSFV 202 (247)
Q Consensus 153 ~~~i~~~~~~~~~-~~l~~~~~dg~i~v~d~~~~--------~----------~~~~~~~~~-----------~~~v~~~ 202 (247)
--...|+.++|.. .+|++|+.|-..++||.+.. . ++..+...+ ....+.+
T Consensus 200 lielk~ltisp~rp~~laVGgsdpfarLYD~Rr~lks~~s~~~~~~~pp~~~~cv~yf~p~hlkn~~gn~~~~~~~~t~v 279 (758)
T KOG1310|consen 200 LIELKCLTISPSRPYYLAVGGSDPFARLYDRRRVLKSFRSDGTMNTCPPKDCRCVRYFSPGHLKNSQGNLDRYITCCTYV 279 (758)
T ss_pred hheeeeeeecCCCCceEEecCCCchhhhhhhhhhccCCCCCccccCCCCcccchhheecCccccCcccccccceeeeEEE
Confidence 1235688899865 47899999999999994321 1 111111111 0125678
Q ss_pred EECCCCCEEEEEEcCCeEEEEECCCcceEEEEccC
Q psy4393 203 KFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTP 237 (247)
Q Consensus 203 ~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~ 237 (247)
.|+|+|.-|+..-..-.|.++|+...++..-+..|
T Consensus 280 tfnpNGtElLvs~~gEhVYlfdvn~~~~~~~y~~~ 314 (758)
T KOG1310|consen 280 TFNPNGTELLVSWGGEHVYLFDVNEDKSPTPYFLP 314 (758)
T ss_pred EECCCCcEEEEeeCCeEEEEEeecCCCCceeecCc
Confidence 99999988887766679999999988877666666
No 182
>KOG2321|consensus
Probab=99.77 E-value=1e-16 Score=128.32 Aligned_cols=220 Identities=21% Similarity=0.315 Sum_probs=162.5
Q ss_pred cCCCCeEEEEECCCCCEE-EEEeCCCeEEEEecCCCeEEEE----------------------------Eecc-------
Q psy4393 25 GHTKAVSSVKFSPNGEWL-ASSSADKLIKIWGAYDGKFEKT----------------------------ISGH------- 68 (247)
Q Consensus 25 ~h~~~v~~~~~s~~~~~l-~~~~~dg~v~iw~~~~~~~~~~----------------------------~~~~------- 68 (247)
+|...-+.+..+|||+++ |+|...-.|++||+.+-..... +.-|
T Consensus 49 e~p~ast~ik~s~DGqY~lAtG~YKP~ikvydlanLSLKFERhlDae~V~feiLsDD~SK~v~L~~DR~IefHak~G~hy 128 (703)
T KOG2321|consen 49 EMPTASTRIKVSPDGQYLLATGTYKPQIKVYDLANLSLKFERHLDAEVVDFEILSDDYSKSVFLQNDRTIEFHAKYGRHY 128 (703)
T ss_pred CCccccceeEecCCCcEEEEecccCCceEEEEcccceeeeeecccccceeEEEeccchhhheEeecCceeeehhhcCeee
Confidence 466777889999999986 4566778999999754322110 0000
Q ss_pred cC----CeEEEEECCCCCEEEEEcCCCeEEEEECCCceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCe
Q psy4393 69 KL----GISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK 144 (247)
Q Consensus 69 ~~----~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~ 144 (247)
.. .-.+++++.-..-|+.++....|+-++++.|..+..+....+.++++..++-..++++|+.+|.+..||.++..
T Consensus 129 ~~RIP~~GRDm~y~~~scDly~~gsg~evYRlNLEqGrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ks 208 (703)
T KOG2321|consen 129 RTRIPKFGRDMKYHKPSCDLYLVGSGSEVYRLNLEQGRFLNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWDPRDKS 208 (703)
T ss_pred eeecCcCCccccccCCCccEEEeecCcceEEEEccccccccccccccccceeeeecCccceEEecccCceEEEecchhhh
Confidence 00 01223333222234445455567778999999888888777889999999999999999999999999999876
Q ss_pred EEEeec------CCCC-----CeEEEEECCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCC--EE
Q psy4393 145 CLKTLP------AHSD-----PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK--YI 211 (247)
Q Consensus 145 ~~~~~~------~~~~-----~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~--~l 211 (247)
.+..+. .|.+ .|+++.|+.+|-.+++|+.+|.+.+||++..+++..--.....+|..+.|.+.++ .|
T Consensus 209 rv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~kdh~~e~pi~~l~~~~~~~q~~v 288 (703)
T KOG2321|consen 209 RVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVKDHGYELPIKKLDWQDTDQQNKV 288 (703)
T ss_pred hheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeecccCCccceeeecccccCCCceE
Confidence 544332 2333 3899999999999999999999999999998877655555667899999977633 34
Q ss_pred EEEEcCCeEEEEECCCcceEEEEccCCcccceee
Q psy4393 212 LAATLDNTLKLWDSKVVTPAIICSTPLNLNYFYR 245 (247)
Q Consensus 212 ~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~ 245 (247)
++.. ...++|||-.++++...+....+.|-||.
T Consensus 289 ~S~D-k~~~kiWd~~~Gk~~asiEpt~~lND~C~ 321 (703)
T KOG2321|consen 289 VSMD-KRILKIWDECTGKPMASIEPTSDLNDFCF 321 (703)
T ss_pred Eecc-hHHhhhcccccCCceeeccccCCcCceee
Confidence 4432 46899999999999998888888888874
No 183
>KOG2919|consensus
Probab=99.77 E-value=3.6e-17 Score=122.56 Aligned_cols=186 Identities=24% Similarity=0.377 Sum_probs=138.8
Q ss_pred eEEEEECCCCCEEEEEeCCCeEEEEecC-CCeEEE---EE----ecccCCeEEEEECCCC-CEEEEEcCCCeEEEEECCC
Q psy4393 30 VSSVKFSPNGEWLASSSADKLIKIWGAY-DGKFEK---TI----SGHKLGISDVAWSSDS-RLLVSGSDDKTLKIWELSS 100 (247)
Q Consensus 30 v~~~~~s~~~~~l~~~~~dg~v~iw~~~-~~~~~~---~~----~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~v~d~~~ 100 (247)
-.+++|+|||+.|++| ....|+++|.. .++.-. .+ .+..+-+.+++|+|.. ..++.++-...+-||.-..
T Consensus 161 AhsL~Fs~DGeqlfaG-ykrcirvFdt~RpGr~c~vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~ 239 (406)
T KOG2919|consen 161 AHSLQFSPDGEQLFAG-YKRCIRVFDTSRPGRDCPVYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDG 239 (406)
T ss_pred heeEEecCCCCeEeec-ccceEEEeeccCCCCCCcchhhhhcccccccceeeeeeccCCCCcceeeecccceeeeEecCC
Confidence 3479999999999875 56799999984 332211 11 1224458889999955 4788888888999998888
Q ss_pred ceEEEEEecCCccEEEEEEcCCCCEEEEeeC-CCCEEEEECCCCe-EEEeecCCCC---CeEEEEECCCCCEEEEecCCC
Q psy4393 101 GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF-DESVRIWDVRTGK-CLKTLPAHSD---PVSAVHFNRDGSLIVSSSYDG 175 (247)
Q Consensus 101 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~v~d~~~~~-~~~~~~~~~~---~i~~~~~~~~~~~l~~~~~dg 175 (247)
+.++..+.+|.+.|..++|.++|+.+++|.. +..|-.||+|... ++..+..|.+ .-.-....|++++|++|+.+|
T Consensus 240 ~~pl~llggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~~pv~~L~rhv~~TNQRI~FDld~~~~~LasG~tdG 319 (406)
T KOG2919|consen 240 RRPLQLLGGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYSRDPVYALERHVGDTNQRILFDLDPKGEILASGDTDG 319 (406)
T ss_pred CCceeeecccCCCeeeEEeccCcCeecccccCCCeEEEEeehhccchhhhhhhhccCccceEEEecCCCCceeeccCCCc
Confidence 8888888899999999999999999999864 6789999998643 4444544433 112245578999999999999
Q ss_pred eEEEEeCCC-ceeeeeeccCCCCCeEEEEECCCCCEEEEEEcC
Q psy4393 176 LCRIWDTAS-GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD 217 (247)
Q Consensus 176 ~i~v~d~~~-~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d 217 (247)
.|++||+.. +.... ........++.++++|-=..+++++..
T Consensus 320 ~V~vwdlk~~gn~~s-v~~~~sd~vNgvslnP~mpilatssGq 361 (406)
T KOG2919|consen 320 SVRVWDLKDLGNEVS-VTGNYSDTVNGVSLNPIMPILATSSGQ 361 (406)
T ss_pred cEEEEecCCCCCccc-ccccccccccceecCcccceeeeccCc
Confidence 999999987 43232 233445567889999987777777644
No 184
>KOG0650|consensus
Probab=99.76 E-value=2.1e-17 Score=132.67 Aligned_cols=198 Identities=23% Similarity=0.377 Sum_probs=162.0
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCC---CeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCc
Q psy4393 25 GHTKAVSSVKFSPNGEWLASSSAD---KLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSG 101 (247)
Q Consensus 25 ~h~~~v~~~~~s~~~~~l~~~~~d---g~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~ 101 (247)
.|...|..+.|+..|.+|++...+ ..|.|+++.....+..+....+.+.++.|+|..-++++++. ..|++||+..+
T Consensus 519 ~~~k~i~~vtWHrkGDYlatV~~~~~~~~VliHQLSK~~sQ~PF~kskG~vq~v~FHPs~p~lfVaTq-~~vRiYdL~kq 597 (733)
T KOG0650|consen 519 KHPKSIRQVTWHRKGDYLATVMPDSGNKSVLIHQLSKRKSQSPFRKSKGLVQRVKFHPSKPYLFVATQ-RSVRIYDLSKQ 597 (733)
T ss_pred ecCCccceeeeecCCceEEEeccCCCcceEEEEecccccccCchhhcCCceeEEEecCCCceEEEEec-cceEEEehhHH
Confidence 688999999999999999986543 46888888777666666666777999999999888887765 57999999988
Q ss_pred eEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCC-eEEEeecCCCCCeEEEEECCCCCEEEEecCCCeEEEE
Q psy4393 102 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG-KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 180 (247)
Q Consensus 102 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~ 180 (247)
..++.+......+..++.+|.|.-++.|+.|+.+..||+.-+ ++.+.+..|...+++++|++.-.++++|+.||.+.||
T Consensus 598 elvKkL~tg~kwiS~msihp~GDnli~gs~d~k~~WfDldlsskPyk~lr~H~~avr~Va~H~ryPLfas~sdDgtv~Vf 677 (733)
T KOG0650|consen 598 ELVKKLLTGSKWISSMSIHPNGDNLILGSYDKKMCWFDLDLSSKPYKTLRLHEKAVRSVAFHKRYPLFASGSDDGTVIVF 677 (733)
T ss_pred HHHHHHhcCCeeeeeeeecCCCCeEEEecCCCeeEEEEcccCcchhHHhhhhhhhhhhhhhccccceeeeecCCCcEEEE
Confidence 777777777788999999999999999999999999999754 4667788899999999999999999999999999888
Q ss_pred eCC------Cce---eeeeeccC---CCCCeEEEEECCCCCEEEEEEcCCeEEEE
Q psy4393 181 DTA------SGQ---CLKTLIDD---DNPPVSFVKFSPNGKYILAATLDNTLKLW 223 (247)
Q Consensus 181 d~~------~~~---~~~~~~~~---~~~~v~~~~~s~~~~~l~~~~~dg~i~vw 223 (247)
... .+. +++.+..+ ....|..+.|+|...+|++++.||+|++|
T Consensus 678 hg~VY~Dl~qnpliVPlK~L~gH~~~~~~gVLd~~wHP~qpWLfsAGAd~tirlf 732 (733)
T KOG0650|consen 678 HGMVYNDLLQNPLIVPLKRLRGHEKTNDLGVLDTIWHPRQPWLFSAGADGTIRLF 732 (733)
T ss_pred eeeeehhhhcCCceEeeeeccCceeecccceEeecccCCCceEEecCCCceEEee
Confidence 432 111 12222211 23457778899999999999999999998
No 185
>KOG0649|consensus
Probab=99.76 E-value=1.8e-15 Score=109.46 Aligned_cols=198 Identities=17% Similarity=0.272 Sum_probs=143.4
Q ss_pred EEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeE------EEEE-------ecccCCeEEEEECCCCCEEE
Q psy4393 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF------EKTI-------SGHKLGISDVAWSSDSRLLV 85 (247)
Q Consensus 19 ~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~------~~~~-------~~~~~~v~~~~~~~~~~~l~ 85 (247)
..+...+|.++|..++|. ..+|++|+ ||.|+-|.-..... ...+ ...-..|+++...|..+-++
T Consensus 54 ~iv~eqahdgpiy~~~f~--d~~Lls~g-dG~V~gw~W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~ 130 (325)
T KOG0649|consen 54 KIVPEQAHDGPIYYLAFH--DDFLLSGG-DGLVYGWEWNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSIL 130 (325)
T ss_pred ceeeccccCCCeeeeeee--hhheeecc-CceEEEeeehhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEE
Confidence 345557999999999998 45566654 69999886422110 0111 01123488899999888788
Q ss_pred EEcCCCeEEEEECCCceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCC----------C
Q psy4393 86 SGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSD----------P 155 (247)
Q Consensus 86 ~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~----------~ 155 (247)
.++.|+.++-||+++|+..+.+++|.+.+.++.--.....+++|++||++++||++++++++.+..... .
T Consensus 131 ~AgGD~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~w 210 (325)
T KOG0649|consen 131 FAGGDGVIYQVDLEDGRIQREYRGHTDYVHSVVGRNANGQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKW 210 (325)
T ss_pred EecCCeEEEEEEecCCEEEEEEcCCcceeeeeeecccCcceeecCCCccEEEEeccccceeEEeccccChhhcCcccCce
Confidence 888999999999999999999999999999988755566799999999999999999998877643321 2
Q ss_pred eEEEEECCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECC
Q psy4393 156 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSK 226 (247)
Q Consensus 156 i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~ 226 (247)
|-+ ..-+..+|++|+ ...+.+|+++..++...+.. ..++..+.|..| .++++++.+.|.-|...
T Consensus 211 iga--la~~edWlvCGg-Gp~lslwhLrsse~t~vfpi--pa~v~~v~F~~d--~vl~~G~g~~v~~~~l~ 274 (325)
T KOG0649|consen 211 IGA--LAVNEDWLVCGG-GPKLSLWHLRSSESTCVFPI--PARVHLVDFVDD--CVLIGGEGNHVQSYTLN 274 (325)
T ss_pred eEE--EeccCceEEecC-CCceeEEeccCCCceEEEec--ccceeEeeeecc--eEEEeccccceeeeeec
Confidence 333 344556776654 56789999999887766633 345666777653 57777766777777654
No 186
>KOG0642|consensus
Probab=99.76 E-value=9.7e-17 Score=127.96 Aligned_cols=174 Identities=27% Similarity=0.421 Sum_probs=143.5
Q ss_pred CCCceEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecC------CC----eEEEEEecccCCeEEEEECCCCCE
Q psy4393 14 KPNYVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY------DG----KFEKTISGHKLGISDVAWSSDSRL 83 (247)
Q Consensus 14 ~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~------~~----~~~~~~~~~~~~v~~~~~~~~~~~ 83 (247)
.......+++.+|.++|.|++..++++.+++|+.||.|+.|++. +. .....+.||...+..+++++...+
T Consensus 331 ~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~ 410 (577)
T KOG0642|consen 331 EKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGIDGTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDR 410 (577)
T ss_pred ccceeeeEEEecccCceEEEEecCCceEEEeeccCceeeeeccCCCCCcccccCcchhccceeccccceeeeeecccccc
Confidence 33455678899999999999999999999999999999999542 11 123457789999999999999999
Q ss_pred EEEEcCCCeEEEEECCCceEEEEEe---------------------------------------------c-------CC
Q psy4393 84 LVSGSDDKTLKIWELSSGKCLKTLK---------------------------------------------G-------HS 111 (247)
Q Consensus 84 l~~~~~d~~i~v~d~~~~~~~~~~~---------------------------------------------~-------~~ 111 (247)
|++++.||++++|+...... ..+. . ..
T Consensus 411 Llscs~DgTvr~w~~~~~~~-~~f~~~~e~g~Plsvd~~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~ 489 (577)
T KOG0642|consen 411 LLSCSSDGTVRLWEPTEESP-CTFGEPKEHGYPLSVDRTSSRPAHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRY 489 (577)
T ss_pred eeeecCCceEEeeccCCcCc-cccCCccccCCcceEeeccchhHhhhhhcccccccchhhhhhhheeeccccCCCccccc
Confidence 99999999999998754322 0000 0 01
Q ss_pred ccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCCCeEEEEeCCCceee
Q psy4393 112 NYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCL 188 (247)
Q Consensus 112 ~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~ 188 (247)
..+..+.++|...+.+++..|+.|+++|..++..+....+|...++++++.|+|.+|++++.|+.+++|.+....+.
T Consensus 490 ~~in~vVs~~~~~~~~~~hed~~Ir~~dn~~~~~l~s~~a~~~svtslai~~ng~~l~s~s~d~sv~l~kld~k~~~ 566 (577)
T KOG0642|consen 490 PQINKVVSHPTADITFTAHEDRSIRFFDNKTGKILHSMVAHKDSVTSLAIDPNGPYLMSGSHDGSVRLWKLDVKTCV 566 (577)
T ss_pred CccceEEecCCCCeeEecccCCceecccccccccchheeeccceecceeecCCCceEEeecCCceeehhhccchhee
Confidence 22455677888889999999999999999999999999999999999999999999999999999999988765544
No 187
>KOG1538|consensus
Probab=99.75 E-value=6.1e-16 Score=126.17 Aligned_cols=205 Identities=21% Similarity=0.358 Sum_probs=151.8
Q ss_pred EEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeE--------EE-E-------------------------
Q psy4393 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF--------EK-T------------------------- 64 (247)
Q Consensus 19 ~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~--------~~-~------------------------- 64 (247)
+--++++|...|.+++|+.||+++|+|+.|..|.+|+..-... .+ .
T Consensus 45 llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~klEG~LkYSH~D~IQCMsFNP~~h~LasCsLsdFglWS~~qK 124 (1081)
T KOG1538|consen 45 LLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEGILKYSHNDAIQCMSFNPITHQLASCSLSDFGLWSPEQK 124 (1081)
T ss_pred cccccccccceEEEEEEccCCceeccCCCceeEEEecccccceeeeccCCeeeEeecCchHHHhhhcchhhccccChhhh
Confidence 3457789999999999999999999999999999997532110 00 0
Q ss_pred -Eec--ccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceEEEEEe---cCCccEEEEEEcCCC-----CEEEEeeCCC
Q psy4393 65 -ISG--HKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLK---GHSNYVFCCNFNPQS-----NLIVSGSFDE 133 (247)
Q Consensus 65 -~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~---~~~~~v~~~~~~~~~-----~~l~~~~~d~ 133 (247)
+.. ...++.+++|..||++++.|-.+|+|.+-+.. ++....+. +..++|++++|+|.. ..++...+..
T Consensus 125 ~V~K~kss~R~~~CsWtnDGqylalG~~nGTIsiRNk~-gEek~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~q 203 (1081)
T KOG1538|consen 125 SVSKHKSSSRIICCSWTNDGQYLALGMFNGTISIRNKN-GEEKVKIERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQ 203 (1081)
T ss_pred hHHhhhhheeEEEeeecCCCcEEEEeccCceEEeecCC-CCcceEEeCCCCCCCCceEEEecCCCCCCccceEEEEeccc
Confidence 000 12357789999999999999999999987643 43333333 356789999999853 4678888888
Q ss_pred CEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEE
Q psy4393 134 SVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILA 213 (247)
Q Consensus 134 ~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 213 (247)
++.++.+. |+.+..-+.-.-...|+.+-++|.+++.|+.|+.+++|.- .|-.+.++-. ...-|..++..|++++++.
T Consensus 204 TLSFy~Ls-G~~Igk~r~L~FdP~CisYf~NGEy~LiGGsdk~L~~fTR-~GvrLGTvg~-~D~WIWtV~~~PNsQ~v~~ 280 (1081)
T KOG1538|consen 204 TLSFYQLS-GKQIGKDRALNFDPCCISYFTNGEYILLGGSDKQLSLFTR-DGVRLGTVGE-QDSWIWTVQAKPNSQYVVV 280 (1081)
T ss_pred eeEEEEec-ceeecccccCCCCchhheeccCCcEEEEccCCCceEEEee-cCeEEeeccc-cceeEEEEEEccCCceEEE
Confidence 88888875 4444332222233467889999999999999999999953 3433444332 3456888999999999999
Q ss_pred EEcCCeEEEEECCC
Q psy4393 214 ATLDNTLKLWDSKV 227 (247)
Q Consensus 214 ~~~dg~i~vwd~~~ 227 (247)
|..||+|.-|+.-.
T Consensus 281 GCqDGTiACyNl~f 294 (1081)
T KOG1538|consen 281 GCQDGTIACYNLIF 294 (1081)
T ss_pred EEccCeeehhhhHH
Confidence 99999999998643
No 188
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.75 E-value=6e-15 Score=121.42 Aligned_cols=201 Identities=18% Similarity=0.180 Sum_probs=135.8
Q ss_pred cCCCCeEEEEECCCCCEEEEEe---CCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEE-cCCC--eEEEEEC
Q psy4393 25 GHTKAVSSVKFSPNGEWLASSS---ADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSG-SDDK--TLKIWEL 98 (247)
Q Consensus 25 ~h~~~v~~~~~s~~~~~l~~~~---~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~--~i~v~d~ 98 (247)
.+...+.+.+|+|||+.|+..+ .+..+.+|+..+++.... ......+..+.|+|||+.|+.. +.++ .|.+||+
T Consensus 196 ~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~l-~~~~~~~~~~~~SPDG~~La~~~~~~g~~~I~~~d~ 274 (429)
T PRK03629 196 RSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQV-ASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDL 274 (429)
T ss_pred cCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEEc-cCCCCCcCCeEECCCCCEEEEEEcCCCCcEEEEEEC
Confidence 3556789999999999888653 234788999877654332 2233345578999999988754 4344 5889999
Q ss_pred CCceEEEEEecCCccEEEEEEcCCCCEEEEeeCC-CC--EEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCC-
Q psy4393 99 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD-ES--VRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD- 174 (247)
Q Consensus 99 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~~--i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d- 174 (247)
++++... +..+...+....|+|+++.++..+.+ +. |+++|+.+++. ..+...........|+|||++++..+.+
T Consensus 275 ~tg~~~~-lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~-~~lt~~~~~~~~~~~SpDG~~Ia~~~~~~ 352 (429)
T PRK03629 275 ASGQIRQ-VTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNG 352 (429)
T ss_pred CCCCEEE-ccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCe-EEeecCCCCccCEEECCCCCEEEEEEccC
Confidence 8876543 44344456778999999988776654 44 55557766543 3333333445668899999988776543
Q ss_pred --CeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCC---eEEEEECCCcceE
Q psy4393 175 --GLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN---TLKLWDSKVVTPA 231 (247)
Q Consensus 175 --g~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg---~i~vwd~~~~~~~ 231 (247)
..+.+||+.+++.. .+... .......|+|||++|+.++.++ .+.+++.....+.
T Consensus 353 g~~~I~~~dl~~g~~~-~Lt~~--~~~~~p~~SpDG~~i~~~s~~~~~~~l~~~~~~G~~~~ 411 (429)
T PRK03629 353 GQQHIAKQDLATGGVQ-VLTDT--FLDETPSIAPNGTMVIYSSSQGMGSVLNLVSTDGRFKA 411 (429)
T ss_pred CCceEEEEECCCCCeE-EeCCC--CCCCCceECCCCCEEEEEEcCCCceEEEEEECCCCCeE
Confidence 35888999877643 22221 1234578999999999998776 3777887555443
No 189
>KOG1538|consensus
Probab=99.74 E-value=8.9e-16 Score=125.22 Aligned_cols=195 Identities=20% Similarity=0.406 Sum_probs=149.1
Q ss_pred CeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceEE----
Q psy4393 29 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCL---- 104 (247)
Q Consensus 29 ~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~---- 104 (247)
.|..++|-|||..|+.+. +..+.+||..+|...+.+++|...|.+++|+.||+.+++|+.|..+.+|+.+-...+
T Consensus 14 ci~d~afkPDGsqL~lAA-g~rlliyD~ndG~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~klEG~LkYSH 92 (1081)
T KOG1538|consen 14 CINDIAFKPDGTQLILAA-GSRLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEGILKYSH 92 (1081)
T ss_pred chheeEECCCCceEEEec-CCEEEEEeCCCcccccccccccceEEEEEEccCCceeccCCCceeEEEecccccceeeecc
Confidence 788999999999877653 568999999999999999999999999999999999999999999999986532111
Q ss_pred ----EEEe-----------------------------cCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeec-
Q psy4393 105 ----KTLK-----------------------------GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLP- 150 (247)
Q Consensus 105 ----~~~~-----------------------------~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~- 150 (247)
+.+. .....+.+++|..||++++.|-.+|+|.+-+-...+.+..-.
T Consensus 93 ~D~IQCMsFNP~~h~LasCsLsdFglWS~~qK~V~K~kss~R~~~CsWtnDGqylalG~~nGTIsiRNk~gEek~~I~Rp 172 (1081)
T KOG1538|consen 93 NDAIQCMSFNPITHQLASCSLSDFGLWSPEQKSVSKHKSSSRIICCSWTNDGQYLALGMFNGTISIRNKNGEEKVKIERP 172 (1081)
T ss_pred CCeeeEeecCchHHHhhhcchhhccccChhhhhHHhhhhheeEEEeeecCCCcEEEEeccCceEEeecCCCCcceEEeCC
Confidence 1000 012357788999999999999999999988654333332222
Q ss_pred -CCCCCeEEEEECCCC-----CEEEEecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEE
Q psy4393 151 -AHSDPVSAVHFNRDG-----SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224 (247)
Q Consensus 151 -~~~~~i~~~~~~~~~-----~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd 224 (247)
+..++|.+++|+|+. ..+++..+..++.+|.+.....-+..... ..-.++.+-++|.+++.|+.|+.+++|.
T Consensus 173 gg~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy~LsG~~Igk~r~L~--FdP~CisYf~NGEy~LiGGsdk~L~~fT 250 (1081)
T KOG1538|consen 173 GGSNSPIWSICWNPSSGEGRNDILAVADWGQTLSFYQLSGKQIGKDRALN--FDPCCISYFTNGEYILLGGSDKQLSLFT 250 (1081)
T ss_pred CCCCCCceEEEecCCCCCCccceEEEEeccceeEEEEecceeecccccCC--CCchhheeccCCcEEEEccCCCceEEEe
Confidence 346789999999963 47888888889999887654322222111 1225788999999999999999999996
Q ss_pred CC
Q psy4393 225 SK 226 (247)
Q Consensus 225 ~~ 226 (247)
-+
T Consensus 251 R~ 252 (1081)
T KOG1538|consen 251 RD 252 (1081)
T ss_pred ec
Confidence 43
No 190
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.74 E-value=1.3e-15 Score=111.68 Aligned_cols=149 Identities=20% Similarity=0.450 Sum_probs=106.7
Q ss_pred EEEEECCCCCEEEEEcC----------CCeEEEEECCC-ceEEEEEec-CCccEEEEEEcCCCCEEEEe--eCCCCEEEE
Q psy4393 73 SDVAWSSDSRLLVSGSD----------DKTLKIWELSS-GKCLKTLKG-HSNYVFCCNFNPQSNLIVSG--SFDESVRIW 138 (247)
Q Consensus 73 ~~~~~~~~~~~l~~~~~----------d~~i~v~d~~~-~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~--~~d~~i~v~ 138 (247)
..+.|+|+|+.|+.-.. -+...+|.++. +.....+.- ..++|.+++|+|+++.+++. ..+..+.+|
T Consensus 9 ~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~ly 88 (194)
T PF08662_consen 9 AKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVTLY 88 (194)
T ss_pred EEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEccCCcccEEE
Confidence 35789999987765433 12344444421 222333322 34469999999999987654 456789999
Q ss_pred ECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecC---CCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEE
Q psy4393 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY---DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT 215 (247)
Q Consensus 139 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~---dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 215 (247)
|++ ++.+..+. ...+..+.|+|+|+++++++. .|.+.+||.++.+.+.... ...++.++|+|||++|++++
T Consensus 89 d~~-~~~i~~~~--~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~---~~~~t~~~WsPdGr~~~ta~ 162 (194)
T PF08662_consen 89 DVK-GKKIFSFG--TQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKISTFE---HSDATDVEWSPDGRYLATAT 162 (194)
T ss_pred cCc-ccEeEeec--CCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEEeeccc---cCcEEEEEEcCCCCEEEEEE
Confidence 997 55556554 457788999999999998874 4679999999877665542 23468899999999999987
Q ss_pred c------CCeEEEEECCC
Q psy4393 216 L------DNTLKLWDSKV 227 (247)
Q Consensus 216 ~------dg~i~vwd~~~ 227 (247)
. |+.++||+...
T Consensus 163 t~~r~~~dng~~Iw~~~G 180 (194)
T PF08662_consen 163 TSPRLRVDNGFKIWSFQG 180 (194)
T ss_pred eccceeccccEEEEEecC
Confidence 4 78999999754
No 191
>KOG2394|consensus
Probab=99.74 E-value=8.9e-17 Score=127.66 Aligned_cols=136 Identities=21% Similarity=0.349 Sum_probs=111.9
Q ss_pred CCCeEEEEECCCCC-EEEEEeCCCeEEEEecCCC--------------e--------------EEEEEecccCCeEEEEE
Q psy4393 27 TKAVSSVKFSPNGE-WLASSSADKLIKIWGAYDG--------------K--------------FEKTISGHKLGISDVAW 77 (247)
Q Consensus 27 ~~~v~~~~~s~~~~-~l~~~~~dg~v~iw~~~~~--------------~--------------~~~~~~~~~~~v~~~~~ 77 (247)
...|+++.|-|.+. .++++-.+|.+++||.... . .+..+......|..++|
T Consensus 219 ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~~k~~~~f~i~t~ksk~~rNPv~~w~~~~g~in~f~F 298 (636)
T KOG2394|consen 219 KSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQALKDGDQFAILTSKSKKTRNPVARWHIGEGSINEFAF 298 (636)
T ss_pred ccceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCcccccCCCCeeEEeeeeccccCCccceeEeccccccceeE
Confidence 47899999999554 5556678999999965311 0 01111223447888999
Q ss_pred CCCCCEEEEEcCCCeEEEEECCCceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeE
Q psy4393 78 SSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVS 157 (247)
Q Consensus 78 ~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~ 157 (247)
+|||++||+.+.||.++|+|..+.+.+..++..-+...|++|+|||++|++|++|..|.||.+...+.+..-++|...|+
T Consensus 299 S~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~erRVVARGqGHkSWVs 378 (636)
T KOG2394|consen 299 SPDGKYLATVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFEERRVVARGQGHKSWVS 378 (636)
T ss_pred cCCCceEEEEecCceEEEeeccHHHHHHHHHhhccceEEEEEcCCccEEEecCCcceEEEEEeccceEEEecccccccee
Confidence 99999999999999999999998877777776667799999999999999999999999999999999998899999999
Q ss_pred EEEEC
Q psy4393 158 AVHFN 162 (247)
Q Consensus 158 ~~~~~ 162 (247)
.++|+
T Consensus 379 ~VaFD 383 (636)
T KOG2394|consen 379 VVAFD 383 (636)
T ss_pred eEeec
Confidence 99998
No 192
>KOG1240|consensus
Probab=99.74 E-value=2.3e-15 Score=129.75 Aligned_cols=220 Identities=16% Similarity=0.220 Sum_probs=162.6
Q ss_pred CCCCCceEEEEEecCCCCeEEEEECCCC-CEEEEEeCCCeEEEEecCCC-------eEEEEEecccCCeEEEEECCCCCE
Q psy4393 12 NPKPNYVLKFTLAGHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDG-------KFEKTISGHKLGISDVAWSSDSRL 83 (247)
Q Consensus 12 ~~~~~~~~~~~~~~h~~~v~~~~~s~~~-~~l~~~~~dg~v~iw~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~ 83 (247)
.+.|+..+..++..|...|..++.++.. .++++|+.||+|++|+...- +....+.....++..+..++.+..
T Consensus 1033 gW~p~G~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~ 1112 (1431)
T KOG1240|consen 1033 GWNPRGILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQ 1112 (1431)
T ss_pred CCCccceEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCe
Confidence 3456777888888999999999987754 89999999999999997521 223334445677899999999999
Q ss_pred EEEEcCCCeEEEEECCCce-------EEEEEec-CCccEEEE-EEcC-CCC-EEEEeeCCCCEEEEECCCCeEEEeec--
Q psy4393 84 LVSGSDDKTLKIWELSSGK-------CLKTLKG-HSNYVFCC-NFNP-QSN-LIVSGSFDESVRIWDVRTGKCLKTLP-- 150 (247)
Q Consensus 84 l~~~~~d~~i~v~d~~~~~-------~~~~~~~-~~~~v~~~-~~~~-~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~-- 150 (247)
+|.++.||.|++.++.... ..+.... ..+.+..+ ++.. .+. .++.+...+.+..||+++......++
T Consensus 1113 ~Av~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~ 1192 (1431)
T KOG1240|consen 1113 FAVSTKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQ 1192 (1431)
T ss_pred EEEEcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcC
Confidence 9999999999999987521 1111111 12223332 2222 233 78888899999999999766544433
Q ss_pred CCCCCeEEEEECCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCC---CCEEEEEE--cCCeEEEEEC
Q psy4393 151 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPN---GKYILAAT--LDNTLKLWDS 225 (247)
Q Consensus 151 ~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~---~~~l~~~~--~dg~i~vwd~ 225 (247)
...+.|++++.+|.+.+++.|+..|.+.+||++=+..+..+..+...++..+..+|- ....++++ ..+.|.+|+.
T Consensus 1193 ~~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~wn~ 1272 (1431)
T KOG1240|consen 1193 LRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSNNEVSTWNM 1272 (1431)
T ss_pred ccccceeEEEecCCceEEEEecCCceEEEEEeecCceeecccCcccCCcceEEeeccCCCCceEEEecccCCCceeeeec
Confidence 345789999999999999999999999999999888888887777778877776654 34555554 4678999998
Q ss_pred CCcceE
Q psy4393 226 KVVTPA 231 (247)
Q Consensus 226 ~~~~~~ 231 (247)
..+...
T Consensus 1273 ~~g~~~ 1278 (1431)
T KOG1240|consen 1273 ETGLRQ 1278 (1431)
T ss_pred ccCcce
Confidence 776433
No 193
>KOG2110|consensus
Probab=99.74 E-value=1.5e-14 Score=110.33 Aligned_cols=198 Identities=15% Similarity=0.216 Sum_probs=148.7
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEec---ccCCeEEEEECCCCCEEEEEc--CCCeEEEEECCCc
Q psy4393 27 TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG---HKLGISDVAWSSDSRLLVSGS--DDKTLKIWELSSG 101 (247)
Q Consensus 27 ~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~--~d~~i~v~d~~~~ 101 (247)
..+|.++.++. ++|+++=+ +.|+|||+.+.+.+..+.. +..++.++++++.+.+++.-+ ..|.|.+||..+-
T Consensus 87 pt~IL~VrmNr--~RLvV~Le-e~IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~nl 163 (391)
T KOG2110|consen 87 PTSILAVRMNR--KRLVVCLE-ESIYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTSGDVVLFDTINL 163 (391)
T ss_pred CCceEEEEEcc--ceEEEEEc-ccEEEEecccceeehhhhccCCCccceEeeccCCCCceEEecCCCCCceEEEEEcccc
Confidence 45677777764 45555544 4599999999888776643 444576777777777887543 3689999999999
Q ss_pred eEEEEEecCCccEEEEEEcCCCCEEEEeeCCCC-EEEEECCCCeEEEeecCCC--CCeEEEEECCCCCEEEEecCCCeEE
Q psy4393 102 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES-VRIWDVRTGKCLKTLPAHS--DPVSAVHFNRDGSLIVSSSYDGLCR 178 (247)
Q Consensus 102 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-i~v~d~~~~~~~~~~~~~~--~~i~~~~~~~~~~~l~~~~~dg~i~ 178 (247)
+.+..+.+|.+.+.+++|+++|.++||+++.|+ ||||.+.+|+.+.+|+-.. ..|.+++|+|++.+|++.+..++|+
T Consensus 164 ~~v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~TeTVH 243 (391)
T KOG2110|consen 164 QPVNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDSQFLAASSNTETVH 243 (391)
T ss_pred eeeeEEEecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCCceeeEEEEEEECCCCCeEEEecCCCeEE
Confidence 999999999999999999999999999999987 7899999999999887544 3578999999999999999999999
Q ss_pred EEeCCCceeee---------------------------ee----------ccCCCCCeEEEEEC--CCCCEEEEEEcCCe
Q psy4393 179 IWDTASGQCLK---------------------------TL----------IDDDNPPVSFVKFS--PNGKYILAATLDNT 219 (247)
Q Consensus 179 v~d~~~~~~~~---------------------------~~----------~~~~~~~v~~~~~s--~~~~~l~~~~~dg~ 219 (247)
+|.+....... .. .......-..+.+. +..+++..++.||.
T Consensus 244 iFKL~~~~~~~~~~p~~~~~~~~~~sk~~~sylps~V~~~~~~~R~FAt~~l~~s~~~~~~~l~~~~~~~~v~vas~dG~ 323 (391)
T KOG2110|consen 244 IFKLEKVSNNPPESPTAGTSWFGKVSKAATSYLPSQVSSVLDQSRKFATAKLPESGRKNICSLSSIQKIPRVLVASYDGH 323 (391)
T ss_pred EEEecccccCCCCCCCCCCcccchhhhhhhhhcchhhhhhhhhccceeEEEccCCCccceEEeeccCCCCEEEEEEcCCe
Confidence 99876421000 00 00001111223444 46788999999999
Q ss_pred EEEEECCC
Q psy4393 220 LKLWDSKV 227 (247)
Q Consensus 220 i~vwd~~~ 227 (247)
+..|....
T Consensus 324 ~y~y~l~~ 331 (391)
T KOG2110|consen 324 LYSYRLPP 331 (391)
T ss_pred EEEEEcCC
Confidence 99998754
No 194
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.74 E-value=7.7e-15 Score=121.28 Aligned_cols=203 Identities=17% Similarity=0.139 Sum_probs=141.4
Q ss_pred EecCCCCeEEEEECCCCCEEEEEeC---CCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEE-EEcCCC--eEEEE
Q psy4393 23 LAGHTKAVSSVKFSPNGEWLASSSA---DKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV-SGSDDK--TLKIW 96 (247)
Q Consensus 23 ~~~h~~~v~~~~~s~~~~~l~~~~~---dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~--~i~v~ 96 (247)
+..|.+.+.+.+|+|||+.|+..+. +..|.+|+..++... .+..+...+...+|+|||+.|+ +.+.++ .|.+|
T Consensus 197 lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~-~l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~ 275 (435)
T PRK05137 197 LTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRE-LVGNFPGMTFAPRFSPDGRKVVMSLSQGGNTDIYTM 275 (435)
T ss_pred EecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEE-EeecCCCcccCcEECCCCCEEEEEEecCCCceEEEE
Confidence 4467788999999999998887653 468999999777553 3444555677889999999875 445554 47778
Q ss_pred ECCCceEEEEEecCCccEEEEEEcCCCCEEEEeeC-CC--CEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecC
Q psy4393 97 ELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF-DE--SVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY 173 (247)
Q Consensus 97 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~--~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 173 (247)
|+.++.. ..+..+........|+|+++.++..+. +| .|+++|+..++. ..+..+........|+|+|+.++....
T Consensus 276 d~~~~~~-~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~-~~lt~~~~~~~~~~~SpdG~~ia~~~~ 353 (435)
T PRK05137 276 DLRSGTT-TRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNP-RRISFGGGRYSTPVWSPRGDLIAFTKQ 353 (435)
T ss_pred ECCCCce-EEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCe-EEeecCCCcccCeEECCCCCEEEEEEc
Confidence 9887764 345545555566899999998887663 33 588889876544 333333445566789999999887654
Q ss_pred C---CeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcC------CeEEEEECCCcceE
Q psy4393 174 D---GLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD------NTLKLWDSKVVTPA 231 (247)
Q Consensus 174 d---g~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d------g~i~vwd~~~~~~~ 231 (247)
+ ..+.+||+.++.. ..+.. ...+....|+|||++|+..+.+ ..+.++|.....+.
T Consensus 354 ~~~~~~i~~~d~~~~~~-~~lt~--~~~~~~p~~spDG~~i~~~~~~~~~~~~~~L~~~dl~g~~~~ 417 (435)
T PRK05137 354 GGGQFSIGVMKPDGSGE-RILTS--GFLVEGPTWAPNGRVIMFFRQTPGSGGAPKLYTVDLTGRNER 417 (435)
T ss_pred CCCceEEEEEECCCCce-EeccC--CCCCCCCeECCCCCEEEEEEccCCCCCcceEEEEECCCCceE
Confidence 3 3688888865542 22222 2235668899999999876643 26888888766554
No 195
>KOG0290|consensus
Probab=99.73 E-value=7.9e-16 Score=113.90 Aligned_cols=192 Identities=19% Similarity=0.279 Sum_probs=146.8
Q ss_pred cCCCCeEEEEECC-CCCEEEEEeCCCeEEEEecCCCe---EEEEEecccCCeEEEEECCCC-CEEEEEcCCCeEEEEECC
Q psy4393 25 GHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGK---FEKTISGHKLGISDVAWSSDS-RLLVSGSDDKTLKIWELS 99 (247)
Q Consensus 25 ~h~~~v~~~~~s~-~~~~l~~~~~dg~v~iw~~~~~~---~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~v~d~~ 99 (247)
.+..+++++.|.. +-+++.+++.|-+..|||++.+. ....+-.|...|.+++|...+ +.+++.+.||.++++|++
T Consensus 148 ~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR 227 (364)
T KOG0290|consen 148 EFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLR 227 (364)
T ss_pred ccCCcccccccccCCcceeEeecccCeEEEEEEeeccccceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEec
Confidence 4568899999987 66788899999999999998753 456677899999999999854 468999999999999998
Q ss_pred CceEEEEEecC---CccEEEEEEcC-CCCEEEEeeCC-CCEEEEECCCC-eEEEeecCCCCCeEEEEECCC-CCEEEEec
Q psy4393 100 SGKCLKTLKGH---SNYVFCCNFNP-QSNLIVSGSFD-ESVRIWDVRTG-KCLKTLPAHSDPVSAVHFNRD-GSLIVSSS 172 (247)
Q Consensus 100 ~~~~~~~~~~~---~~~v~~~~~~~-~~~~l~~~~~d-~~i~v~d~~~~-~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~ 172 (247)
..+....+... ..+...++|++ +-+++|+-..| ..|.+.|+|.. .++..+..|.+.|+.++|.|. ..++++++
T Consensus 228 ~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaG 307 (364)
T KOG0290|consen 228 SLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAG 307 (364)
T ss_pred ccccceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEEEecCCCcceehhhcCcccccceEecCCCCceeeecC
Confidence 76654444332 34567788887 44677776554 46899999975 467889999999999999996 45899999
Q ss_pred CCCeEEEEeCCCcee--e--eeeccCCCCCeEEEEECC-CCCEEEEEEc
Q psy4393 173 YDGLCRIWDTASGQC--L--KTLIDDDNPPVSFVKFSP-NGKYILAATL 216 (247)
Q Consensus 173 ~dg~i~v~d~~~~~~--~--~~~~~~~~~~v~~~~~s~-~~~~l~~~~~ 216 (247)
.|.+..+||+...-. . ..+....+..|+.+.|++ ++.+++.+..
T Consensus 308 DD~qaliWDl~q~~~~~~~dPilay~a~~EVNqi~Ws~~~~Dwiai~~~ 356 (364)
T KOG0290|consen 308 DDCQALIWDLQQMPRENGEDPILAYTAGGEVNQIQWSSSQPDWIAICFG 356 (364)
T ss_pred CcceEEEEecccccccCCCCchhhhhccceeeeeeecccCCCEEEEEec
Confidence 999999999875321 0 111122456789999995 4567777763
No 196
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.73 E-value=9.8e-15 Score=120.53 Aligned_cols=202 Identities=20% Similarity=0.184 Sum_probs=136.8
Q ss_pred EecCCCCeEEEEECCCCCEEEEEeC---CCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEE-EEcCCC--eEEEE
Q psy4393 23 LAGHTKAVSSVKFSPNGEWLASSSA---DKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV-SGSDDK--TLKIW 96 (247)
Q Consensus 23 ~~~h~~~v~~~~~s~~~~~l~~~~~---dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~--~i~v~ 96 (247)
+..|...+.+.+|+|||+.|+..+. +..|.+|+..++.... +.........+.|+|||+.++ +.+.++ .|++|
T Consensus 199 lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~-l~~~~g~~~~~~~SpDG~~l~~~~s~~g~~~Iy~~ 277 (433)
T PRK04922 199 ILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQREL-VASFRGINGAPSFSPDGRRLALTLSRDGNPEIYVM 277 (433)
T ss_pred eecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEE-eccCCCCccCceECCCCCEEEEEEeCCCCceEEEE
Confidence 3356677899999999999887653 3469999997765433 333344455789999999775 444444 69999
Q ss_pred ECCCceEEEEEecCCccEEEEEEcCCCCEEEEeeC-CCC--EEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecC
Q psy4393 97 ELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF-DES--VRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY 173 (247)
Q Consensus 97 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~--i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 173 (247)
|+.+++.. .+..+........|+|+++.++..+. ++. |+++|+.+++.. .+..+.......+|+|+|+.++..+.
T Consensus 278 d~~~g~~~-~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~-~lt~~g~~~~~~~~SpDG~~Ia~~~~ 355 (433)
T PRK04922 278 DLGSRQLT-RLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAE-RLTFQGNYNARASVSPDGKKIAMVHG 355 (433)
T ss_pred ECCCCCeE-ECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCeE-EeecCCCCccCEEECCCCCEEEEEEC
Confidence 99887643 44444444456799999998887654 444 667777666532 22222334456899999999887654
Q ss_pred CC---eEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcC---CeEEEEECCCcce
Q psy4393 174 DG---LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD---NTLKLWDSKVVTP 230 (247)
Q Consensus 174 dg---~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---g~i~vwd~~~~~~ 230 (247)
++ .|.+||+.+++.. .+... .......|+|||++|+..+.+ +.|.+++......
T Consensus 356 ~~~~~~I~v~d~~~g~~~-~Lt~~--~~~~~p~~spdG~~i~~~s~~~g~~~L~~~~~~g~~~ 415 (433)
T PRK04922 356 SGGQYRIAVMDLSTGSVR-TLTPG--SLDESPSFAPNGSMVLYATREGGRGVLAAVSTDGRVR 415 (433)
T ss_pred CCCceeEEEEECCCCCeE-ECCCC--CCCCCceECCCCCEEEEEEecCCceEEEEEECCCCce
Confidence 33 6899999877644 23221 123456899999998887753 3688888865443
No 197
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.72 E-value=1.2e-14 Score=115.99 Aligned_cols=196 Identities=16% Similarity=0.253 Sum_probs=132.1
Q ss_pred CCeEEEEECCCCCEEEEEeC-CCeEEEEecCC-CeE---EEEEecccCCeEEEEECCCCCEEEEE-cCCCeEEEEECCCc
Q psy4393 28 KAVSSVKFSPNGEWLASSSA-DKLIKIWGAYD-GKF---EKTISGHKLGISDVAWSSDSRLLVSG-SDDKTLKIWELSSG 101 (247)
Q Consensus 28 ~~v~~~~~s~~~~~l~~~~~-dg~v~iw~~~~-~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~v~d~~~~ 101 (247)
+....++|+|++++|++++. ++.|.+|+..+ +.. ...+. +......++++|++++++++ ..++.|.+||+.+.
T Consensus 80 ~~p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~-~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~ 158 (330)
T PRK11028 80 GSPTHISTDHQGRFLFSASYNANCVSVSPLDKDGIPVAPIQIIE-GLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDD 158 (330)
T ss_pred CCceEEEECCCCCEEEEEEcCCCeEEEEEECCCCCCCCceeecc-CCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCC
Confidence 34568999999998887664 78999999863 221 22222 22346778899999988654 45689999999763
Q ss_pred eEEEE-----Ee-cCCccEEEEEEcCCCCEEEEeeC-CCCEEEEECCC--Ce--EEEeecCC------CCCeEEEEECCC
Q psy4393 102 KCLKT-----LK-GHSNYVFCCNFNPQSNLIVSGSF-DESVRIWDVRT--GK--CLKTLPAH------SDPVSAVHFNRD 164 (247)
Q Consensus 102 ~~~~~-----~~-~~~~~v~~~~~~~~~~~l~~~~~-d~~i~v~d~~~--~~--~~~~~~~~------~~~i~~~~~~~~ 164 (247)
..+.. .. ........+.|+|++++++++.. ++.|.+||+.. ++ .+..+... ......+.++|+
T Consensus 159 g~l~~~~~~~~~~~~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pd 238 (330)
T PRK11028 159 GHLVAQEPAEVTTVEGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPD 238 (330)
T ss_pred CcccccCCCceecCCCCCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCC
Confidence 32211 11 11233567899999999988876 88999999973 22 23333221 112335889999
Q ss_pred CCEEEEecC-CCeEEEEeCCCce----eeeeeccCCCCCeEEEEECCCCCEEEEEEc-CCeEEEEECC
Q psy4393 165 GSLIVSSSY-DGLCRIWDTASGQ----CLKTLIDDDNPPVSFVKFSPNGKYILAATL-DNTLKLWDSK 226 (247)
Q Consensus 165 ~~~l~~~~~-dg~i~v~d~~~~~----~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-dg~i~vwd~~ 226 (247)
+++++++.. ++.|.+|++.... ........ .....+.++|||++|+++.. +++|.+|+.+
T Consensus 239 g~~lyv~~~~~~~I~v~~i~~~~~~~~~~~~~~~~--~~p~~~~~~~dg~~l~va~~~~~~v~v~~~~ 304 (330)
T PRK11028 239 GRHLYACDRTASLISVFSVSEDGSVLSFEGHQPTE--TQPRGFNIDHSGKYLIAAGQKSHHISVYEID 304 (330)
T ss_pred CCEEEEecCCCCeEEEEEEeCCCCeEEEeEEEecc--ccCCceEECCCCCEEEEEEccCCcEEEEEEc
Confidence 999988854 6899999985432 12221111 12346899999999998875 8999999875
No 198
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.72 E-value=1.1e-14 Score=119.96 Aligned_cols=198 Identities=25% Similarity=0.290 Sum_probs=130.6
Q ss_pred ecCCCCeEEEEECCCCCEEEEEeCC---CeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEE-EEcCCCeEEEE--E
Q psy4393 24 AGHTKAVSSVKFSPNGEWLASSSAD---KLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV-SGSDDKTLKIW--E 97 (247)
Q Consensus 24 ~~h~~~v~~~~~s~~~~~l~~~~~d---g~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~v~--d 97 (247)
..+...+.+.+|+|||+.|+..+.. ..|.+||..+++... +..........+|+|||+.|+ +.+.++...+| |
T Consensus 192 ~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~-l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d 270 (427)
T PRK02889 192 LSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRV-VANFKGSNSAPAWSPDGRTLAVALSRDGNSQIYTVN 270 (427)
T ss_pred ccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEE-eecCCCCccceEECCCCCEEEEEEccCCCceEEEEE
Confidence 3567789999999999998876532 359999998776543 333344566889999999886 45667765555 4
Q ss_pred CCCceEEEEEecCCccEEEEEEcCCCCEEEEeeC-CCCEEEEE--CCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCC
Q psy4393 98 LSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF-DESVRIWD--VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 174 (247)
Q Consensus 98 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~v~d--~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 174 (247)
...+. ...+..+........|+|+|+.++..+. ++...+|. +.++.. ..+...........|+|+|++++..+.+
T Consensus 271 ~~~~~-~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~-~~lt~~g~~~~~~~~SpDG~~Ia~~s~~ 348 (427)
T PRK02889 271 ADGSG-LRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAA-QRVTFTGSYNTSPRISPDGKLLAYISRV 348 (427)
T ss_pred CCCCC-cEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCce-EEEecCCCCcCceEECCCCCEEEEEEcc
Confidence 54443 3445444444556789999998876654 45556664 444432 2222222233457899999998876654
Q ss_pred C---eEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCC---eEEEEECCC
Q psy4393 175 G---LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN---TLKLWDSKV 227 (247)
Q Consensus 175 g---~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg---~i~vwd~~~ 227 (247)
+ .|.+||+.+++... +... .......|+|||++|+.++.++ .+.+.+...
T Consensus 349 ~g~~~I~v~d~~~g~~~~-lt~~--~~~~~p~~spdg~~l~~~~~~~g~~~l~~~~~~g 404 (427)
T PRK02889 349 GGAFKLYVQDLATGQVTA-LTDT--TRDESPSFAPNGRYILYATQQGGRSVLAAVSSDG 404 (427)
T ss_pred CCcEEEEEEECCCCCeEE-ccCC--CCccCceECCCCCEEEEEEecCCCEEEEEEECCC
Confidence 4 69999998876432 2222 2235678999999998887544 466666643
No 199
>KOG2111|consensus
Probab=99.71 E-value=2e-14 Score=107.65 Aligned_cols=177 Identities=23% Similarity=0.377 Sum_probs=132.8
Q ss_pred CeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECC-CceEEEEEecCCccEEEEEEcC--CCCE
Q psy4393 49 KLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELS-SGKCLKTLKGHSNYVFCCNFNP--QSNL 125 (247)
Q Consensus 49 g~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~-~~~~~~~~~~~~~~v~~~~~~~--~~~~ 125 (247)
..|.|||-...+...++. ...+|.++.+.++ .|++. ..+.|.+|... +.+.++.+.....+---|+..| ...+
T Consensus 75 NkviIWDD~k~~~i~el~-f~~~I~~V~l~r~--riVvv-l~~~I~VytF~~n~k~l~~~et~~NPkGlC~~~~~~~k~~ 150 (346)
T KOG2111|consen 75 NKVIIWDDLKERCIIELS-FNSEIKAVKLRRD--RIVVV-LENKIYVYTFPDNPKLLHVIETRSNPKGLCSLCPTSNKSL 150 (346)
T ss_pred ceEEEEecccCcEEEEEE-eccceeeEEEcCC--eEEEE-ecCeEEEEEcCCChhheeeeecccCCCceEeecCCCCceE
Confidence 479999966666666554 4567999998865 45544 45789999987 3444454433221211334444 3345
Q ss_pred EEE-eeCCCCEEEEECCCCeE--EEeecCCCCCeEEEEECCCCCEEEEecCCCe-EEEEeCCCceeeeeeccC-CCCCeE
Q psy4393 126 IVS-GSFDESVRIWDVRTGKC--LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGL-CRIWDTASGQCLKTLIDD-DNPPVS 200 (247)
Q Consensus 126 l~~-~~~d~~i~v~d~~~~~~--~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~-i~v~d~~~~~~~~~~~~~-~~~~v~ 200 (247)
||. |-.-|.|++-|+..... ...+.+|...|.|++.+.+|..+|+++..|+ |++||..+++.+..+..+ ....|.
T Consensus 151 LafPg~k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy 230 (346)
T KOG2111|consen 151 LAFPGFKTGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIY 230 (346)
T ss_pred EEcCCCccceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEE
Confidence 555 34568999999986554 4678899999999999999999999999995 799999999988877543 456799
Q ss_pred EEEECCCCCEEEEEEcCCeEEEEECCCcc
Q psy4393 201 FVKFSPNGKYILAATLDNTLKLWDSKVVT 229 (247)
Q Consensus 201 ~~~~s~~~~~l~~~~~dg~i~vwd~~~~~ 229 (247)
+++|||+..+|++++..|+++||.+++..
T Consensus 231 ~iaFSp~~s~LavsSdKgTlHiF~l~~~~ 259 (346)
T KOG2111|consen 231 CIAFSPNSSWLAVSSDKGTLHIFSLRDTE 259 (346)
T ss_pred EEEeCCCccEEEEEcCCCeEEEEEeecCC
Confidence 99999999999999999999999987643
No 200
>KOG1523|consensus
Probab=99.71 E-value=7.6e-16 Score=115.29 Aligned_cols=191 Identities=18% Similarity=0.281 Sum_probs=145.4
Q ss_pred ceEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEec-CCCeEE--EEEecccCCeEEEEECCCCCEEEEEcCCCeE
Q psy4393 17 YVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGA-YDGKFE--KTISGHKLGISDVAWSSDSRLLVSGSDDKTL 93 (247)
Q Consensus 17 ~~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~-~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 93 (247)
|....++..|...|+.+.|+|..+.|++|+.|..-++|.. .++... ..+..+....+++.|+|.++.+++++....|
T Consensus 45 w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~~~~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~i 124 (361)
T KOG1523|consen 45 WEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPSGGTWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLI 124 (361)
T ss_pred ceeceehhhhCcceeEEeecCCCCceeEccCCCCccccccCCCCeeccceeEEEeccceeeEeecCcCceEEeccCccEE
Confidence 6677788899999999999999999999999999999998 455443 3345667789999999999999999999999
Q ss_pred EEEECCCceEE----EEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCC------------------CeEEEeecC
Q psy4393 94 KIWELSSGKCL----KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT------------------GKCLKTLPA 151 (247)
Q Consensus 94 ~v~d~~~~~~~----~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~------------------~~~~~~~~~ 151 (247)
.+|-++...-- +.-+...+.|.+++|+|++-++++|+.|+..++|.... |+.+.++..
T Consensus 125 sVcy~E~ENdWWVsKhikkPirStv~sldWhpnnVLlaaGs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~ 204 (361)
T KOG1523|consen 125 SVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNVLLAAGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASS 204 (361)
T ss_pred EEEEEecccceehhhhhCCccccceeeeeccCCcceecccccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhcc
Confidence 99988765422 11234467799999999999999999999999996531 111223334
Q ss_pred CCCCeEEEEECCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCC
Q psy4393 152 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPN 207 (247)
Q Consensus 152 ~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~ 207 (247)
..+.+..+.|+|+|..|+-.+.|+.+.+-|................|...+.|-.+
T Consensus 205 ~ggwvh~v~fs~sG~~lawv~Hds~v~~~da~~p~~~v~~~~~~~lP~ls~~~ise 260 (361)
T KOG1523|consen 205 SGGWVHGVLFSPSGNRLAWVGHDSTVSFVDAAGPSERVQSVATAQLPLLSVSWISE 260 (361)
T ss_pred CCCceeeeEeCCCCCEeeEecCCCceEEeecCCCchhccchhhccCCceeeEeecC
Confidence 45678999999999999999999999999887654222112222245555555443
No 201
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.71 E-value=9.1e-15 Score=107.25 Aligned_cols=152 Identities=20% Similarity=0.391 Sum_probs=107.4
Q ss_pred EEEEECCCCCEEEEEeC----------CCeEEEEecCC-CeEEEEEec-ccCCeEEEEECCCCCEEEEE--cCCCeEEEE
Q psy4393 31 SSVKFSPNGEWLASSSA----------DKLIKIWGAYD-GKFEKTISG-HKLGISDVAWSSDSRLLVSG--SDDKTLKIW 96 (247)
Q Consensus 31 ~~~~~s~~~~~l~~~~~----------dg~v~iw~~~~-~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~--~~d~~i~v~ 96 (247)
..+.|+|+|++|+.-.. -+...+|.+.. ......+.- ...+|.+++|+|+|+.+++. ..++.+.+|
T Consensus 9 ~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~ly 88 (194)
T PF08662_consen 9 AKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVTLY 88 (194)
T ss_pred EEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEccCCcccEEE
Confidence 46789999998764222 13345554422 222333332 34469999999999987554 356789999
Q ss_pred ECCCceEEEEEecCCccEEEEEEcCCCCEEEEeeCC---CCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecC
Q psy4393 97 ELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD---ESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY 173 (247)
Q Consensus 97 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 173 (247)
|++ ++.+..+. ...+..+.|+|+|+++++++.+ |.+.+||.+..+.+..... ..++.++|+|+|++++++..
T Consensus 89 d~~-~~~i~~~~--~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~~--~~~t~~~WsPdGr~~~ta~t 163 (194)
T PF08662_consen 89 DVK-GKKIFSFG--TQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKISTFEH--SDATDVEWSPDGRYLATATT 163 (194)
T ss_pred cCc-ccEeEeec--CCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEEeecccc--CcEEEEEEcCCCCEEEEEEe
Confidence 996 55555554 4567789999999999998743 6699999998887766543 34789999999999998764
Q ss_pred ------CCeEEEEeCCCceee
Q psy4393 174 ------DGLCRIWDTASGQCL 188 (247)
Q Consensus 174 ------dg~i~v~d~~~~~~~ 188 (247)
|..++||+.. |+.+
T Consensus 164 ~~r~~~dng~~Iw~~~-G~~l 183 (194)
T PF08662_consen 164 SPRLRVDNGFKIWSFQ-GRLL 183 (194)
T ss_pred ccceeccccEEEEEec-CeEe
Confidence 6678899875 4433
No 202
>KOG1188|consensus
Probab=99.71 E-value=3.8e-16 Score=117.73 Aligned_cols=147 Identities=22% Similarity=0.437 Sum_probs=120.7
Q ss_pred CEEEEEcCCCeEEEEECCCceEEEEEecCCccEEEEEEcC--CCCEEEEeeCCCCEEEEECCCCeEEEeec--CCC-CCe
Q psy4393 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNP--QSNLIVSGSFDESVRIWDVRTGKCLKTLP--AHS-DPV 156 (247)
Q Consensus 82 ~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~v~d~~~~~~~~~~~--~~~-~~i 156 (247)
..++++-.+|.|++||..+++.+..++++...+..+.|.. ....+.+++.||.|++||+|+......+. .+. .+.
T Consensus 41 ~~vav~lSngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f 120 (376)
T KOG1188|consen 41 TAVAVSLSNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTPF 120 (376)
T ss_pred eeEEEEecCCeEEEEeccchhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCCcc
Confidence 5688888899999999999999999999988888888865 56789999999999999999876554443 333 456
Q ss_pred EEEEECCCCCEEEEecC----CCeEEEEeCCCcee-eeeeccCCCCCeEEEEECCCC-CEEEEEEcCCeEEEEECCCc
Q psy4393 157 SAVHFNRDGSLIVSSSY----DGLCRIWDTASGQC-LKTLIDDDNPPVSFVKFSPNG-KYILAATLDNTLKLWDSKVV 228 (247)
Q Consensus 157 ~~~~~~~~~~~l~~~~~----dg~i~v~d~~~~~~-~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~vwd~~~~ 228 (247)
.+++.+-++..+++|+. +-.+.+||++..+. +..+...|...|+++.|+|+. .+|++|+.||.|.|||.+..
T Consensus 121 ~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d 198 (376)
T KOG1188|consen 121 ICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKD 198 (376)
T ss_pred eEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeecCCC
Confidence 77777667778887764 45799999998776 777777888899999999975 58899999999999998653
No 203
>KOG1272|consensus
Probab=99.71 E-value=1.8e-17 Score=129.40 Aligned_cols=190 Identities=22% Similarity=0.409 Sum_probs=158.1
Q ss_pred CCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceEEEEE
Q psy4393 28 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTL 107 (247)
Q Consensus 28 ~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~ 107 (247)
..|..+.|..+.+++|++. ...++|||- .|..+..+.. ...|..+.|-|..-+|++++..|.++.-|+.+|+.+..+
T Consensus 171 Etv~Dv~~LHneq~~AVAQ-K~y~yvYD~-~GtElHClk~-~~~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~ 247 (545)
T KOG1272|consen 171 ETVRDVTFLHNEQFFAVAQ-KKYVYVYDN-NGTELHCLKR-HIRVARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASI 247 (545)
T ss_pred hhhhhhhhhcchHHHHhhh-hceEEEecC-CCcEEeehhh-cCchhhhcccchhheeeecccCCceEEEeechhhhhHHH
Confidence 4577778888778877764 567899986 4444555554 346888999999999999999999999999999999888
Q ss_pred ecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCCCeEEEEeCCCcee
Q psy4393 108 KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC 187 (247)
Q Consensus 108 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~ 187 (247)
....+.+..++-+|.+..+-+|..+|.|.+|...+.+++..+..|.++|.++++.++|.+++|++.|..++|||++.-..
T Consensus 248 ~t~~G~~~vm~qNP~NaVih~GhsnGtVSlWSP~skePLvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~q 327 (545)
T KOG1272|consen 248 RTGAGRTDVMKQNPYNAVIHLGHSNGTVSLWSPNSKEPLVKILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQ 327 (545)
T ss_pred HccCCccchhhcCCccceEEEcCCCceEEecCCCCcchHHHHHhcCCCcceEEECCCCcEEeecccccceeEeeeccccc
Confidence 88888888899999999999999999999999999999888999999999999999999999999999999999998776
Q ss_pred eeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEE
Q psy4393 188 LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224 (247)
Q Consensus 188 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd 224 (247)
+.+.... .+...+++|..| +++.+....|.||-
T Consensus 328 l~t~~tp--~~a~~ls~Sqkg--lLA~~~G~~v~iw~ 360 (545)
T KOG1272|consen 328 LHTYRTP--HPASNLSLSQKG--LLALSYGDHVQIWK 360 (545)
T ss_pred cceeecC--CCcccccccccc--ceeeecCCeeeeeh
Confidence 6555442 345667777654 56666677999995
No 204
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.70 E-value=9.3e-14 Score=110.96 Aligned_cols=200 Identities=13% Similarity=0.206 Sum_probs=133.7
Q ss_pred CCCCeEEEEECCCCCEEEEEe-CCCeEEEEecC-CCeEE--EEEecccCCeEEEEECCCCCEEEEEcC-CCeEEEEECCC
Q psy4393 26 HTKAVSSVKFSPNGEWLASSS-ADKLIKIWGAY-DGKFE--KTISGHKLGISDVAWSSDSRLLVSGSD-DKTLKIWELSS 100 (247)
Q Consensus 26 h~~~v~~~~~s~~~~~l~~~~-~dg~v~iw~~~-~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~v~d~~~ 100 (247)
+.+....++++|++++|++++ .++.|.+|+.. ++... .... .......++++|+++++++++. ++.+.+|++.+
T Consensus 33 ~~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~~-~~~~p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~ 111 (330)
T PRK11028 33 VPGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAESP-LPGSPTHISTDHQGRFLFSASYNANCVSVSPLDK 111 (330)
T ss_pred cCCCCccEEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeeec-CCCCceEEEECCCCCEEEEEEcCCCeEEEEEECC
Confidence 345677889999999887654 57889999886 33322 1121 2234567999999998887764 78999999864
Q ss_pred c-e---EEEEEecCCccEEEEEEcCCCCEEEEe-eCCCCEEEEECCCCeEEE-------eecCCCCCeEEEEECCCCCEE
Q psy4393 101 G-K---CLKTLKGHSNYVFCCNFNPQSNLIVSG-SFDESVRIWDVRTGKCLK-------TLPAHSDPVSAVHFNRDGSLI 168 (247)
Q Consensus 101 ~-~---~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~v~d~~~~~~~~-------~~~~~~~~i~~~~~~~~~~~l 168 (247)
. . .+..+. .......+.++|++++++++ ..++.|.+||+.+...+. .... ......+.|+|+++++
T Consensus 112 ~g~~~~~~~~~~-~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~~-g~~p~~~~~~pdg~~l 189 (330)
T PRK11028 112 DGIPVAPIQIIE-GLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTVE-GAGPRHMVFHPNQQYA 189 (330)
T ss_pred CCCCCCceeecc-CCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCcccccCCCceecCC-CCCCceEEECCCCCEE
Confidence 2 1 222222 22335667899999888655 456899999997632221 1122 2335678999999999
Q ss_pred EEecC-CCeEEEEeCCC--ce--eeeeecc--C---CCCCeEEEEECCCCCEEEEEEc-CCeEEEEECCCc
Q psy4393 169 VSSSY-DGLCRIWDTAS--GQ--CLKTLID--D---DNPPVSFVKFSPNGKYILAATL-DNTLKLWDSKVV 228 (247)
Q Consensus 169 ~~~~~-dg~i~v~d~~~--~~--~~~~~~~--~---~~~~v~~~~~s~~~~~l~~~~~-dg~i~vwd~~~~ 228 (247)
+++.. ++.|.+|++.. ++ ....+.. . .......+.++|++++|+++.. ++.|.+|+.+..
T Consensus 190 yv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~~ 260 (330)
T PRK11028 190 YCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLYACDRTASLISVFSVSED 260 (330)
T ss_pred EEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEEEEecCCCCeEEEEEEeCC
Confidence 88776 89999999873 22 2222211 1 0111235889999999999864 789999997543
No 205
>KOG0322|consensus
Probab=99.70 E-value=4.3e-16 Score=113.81 Aligned_cols=157 Identities=22% Similarity=0.336 Sum_probs=123.6
Q ss_pred CCCCeEEEEECC-CCC--EEEEEeCCCeEEEEecCCCeE----------EEEEecccCCeEEEEECCCCCEEEEEcCCCe
Q psy4393 26 HTKAVSSVKFSP-NGE--WLASSSADKLIKIWGAYDGKF----------EKTISGHKLGISDVAWSSDSRLLVSGSDDKT 92 (247)
Q Consensus 26 h~~~v~~~~~s~-~~~--~l~~~~~dg~v~iw~~~~~~~----------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 92 (247)
..+.+.+..+.. ++. +|++|.++|.+.+||...+.. ......|..+|.++.+.+.-..=++++.+..
T Consensus 149 Klgsvmc~~~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dk 228 (323)
T KOG0322|consen 149 KLGSVMCQDKDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDK 228 (323)
T ss_pred ccCceeeeeccccccceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCCcccc
Confidence 457788887644 344 456788999999999987632 2334567888999999876555567777778
Q ss_pred EEEEECCCc--eEE--EEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEE
Q psy4393 93 LKIWELSSG--KCL--KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLI 168 (247)
Q Consensus 93 i~v~d~~~~--~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 168 (247)
+.+|++... .+. ..+.-....+..+..-||++.+|++++|++||+|..++.+++..++-|...|.+++|+|+..++
T Consensus 229 l~~~Sl~~s~gslq~~~e~~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLkyHsagvn~vAfspd~~lm 308 (323)
T KOG0322|consen 229 LVMYSLNHSTGSLQIRKEITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLKYHSAGVNAVAFSPDCELM 308 (323)
T ss_pred ceeeeeccccCcccccceEEecCCCccceEEccCCcEEeecccCCcEEEEEeccCCchhhhhhhhcceeEEEeCCCCchh
Confidence 888987643 211 1122223346778899999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCeEEEEeC
Q psy4393 169 VSSSYDGLCRIWDT 182 (247)
Q Consensus 169 ~~~~~dg~i~v~d~ 182 (247)
|+++.|+.|.+|++
T Consensus 309 AaaskD~rISLWkL 322 (323)
T KOG0322|consen 309 AAASKDARISLWKL 322 (323)
T ss_pred hhccCCceEEeeec
Confidence 99999999999986
No 206
>KOG2445|consensus
Probab=99.69 E-value=1.2e-14 Score=108.44 Aligned_cols=170 Identities=22% Similarity=0.415 Sum_probs=131.4
Q ss_pred CCCCceEEEEEecCCCCeEEEEECC--CCCEEEEEeCCCeEEEEecCCC---------eEEEEEecccCCeEEEEECCC-
Q psy4393 13 PKPNYVLKFTLAGHTKAVSSVKFSP--NGEWLASSSADKLIKIWGAYDG---------KFEKTISGHKLGISDVAWSSD- 80 (247)
Q Consensus 13 ~~~~~~~~~~~~~h~~~v~~~~~s~--~~~~l~~~~~dg~v~iw~~~~~---------~~~~~~~~~~~~v~~~~~~~~- 80 (247)
+..+|...-+.+.|.+.|..+.|.+ -|+.+|+|+.|+++.||.-... .....+......|+++.|.|.
T Consensus 45 ~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWEE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~h 124 (361)
T KOG2445|consen 45 DSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWEEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKH 124 (361)
T ss_pred CCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeeeecccccccccceeEEEEEeecCCcceeEEEecchh
Confidence 4456777888889999999999965 5899999999999999975211 122345556778999999984
Q ss_pred -CCEEEEEcCCCeEEEEECCCce--------------------------E------------------------------
Q psy4393 81 -SRLLVSGSDDKTLKIWELSSGK--------------------------C------------------------------ 103 (247)
Q Consensus 81 -~~~l~~~~~d~~i~v~d~~~~~--------------------------~------------------------------ 103 (247)
|-.+++++.||.++||+..... +
T Consensus 125 lGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iy 204 (361)
T KOG2445|consen 125 LGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIY 204 (361)
T ss_pred cceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCcccccCcceEEeeccccccCceEEEEcccCCccccceEEE
Confidence 7789999999999999742100 0
Q ss_pred -----------EEEEecCCccEEEEEEcCC----CCEEEEeeCCCCEEEEECCCC--------------------eEEEe
Q psy4393 104 -----------LKTLKGHSNYVFCCNFNPQ----SNLIVSGSFDESVRIWDVRTG--------------------KCLKT 148 (247)
Q Consensus 104 -----------~~~~~~~~~~v~~~~~~~~----~~~l~~~~~d~~i~v~d~~~~--------------------~~~~~ 148 (247)
+..+..+..+|..++|.|. ..++|+++.|| |+||.++.. +.+..
T Consensus 205 e~~e~~rKw~kva~L~d~~dpI~di~wAPn~Gr~y~~lAvA~kDg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~ 283 (361)
T KOG2445|consen 205 EYNENGRKWLKVAELPDHTDPIRDISWAPNIGRSYHLLAVATKDG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSE 283 (361)
T ss_pred EecCCcceeeeehhcCCCCCcceeeeeccccCCceeeEEEeecCc-EEEEEEeeccchhhhhcccCCCCccccceEEeee
Confidence 0011245677889999984 46899999999 999998731 12445
Q ss_pred ecCCCCCeEEEEECCCCCEEEEecCCCeEEEEeCC
Q psy4393 149 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA 183 (247)
Q Consensus 149 ~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~ 183 (247)
+..|.+.|..+.|+-.|..|++.+.||.+++|...
T Consensus 284 ~~~H~~~VWrv~wNmtGtiLsStGdDG~VRLWkan 318 (361)
T KOG2445|consen 284 LDDHNGEVWRVRWNMTGTILSSTGDDGCVRLWKAN 318 (361)
T ss_pred ccCCCCceEEEEEeeeeeEEeecCCCceeeehhhh
Confidence 67889999999999999999999999999999643
No 207
>KOG1524|consensus
Probab=99.69 E-value=9.3e-16 Score=122.10 Aligned_cols=179 Identities=26% Similarity=0.376 Sum_probs=140.0
Q ss_pred CEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceEEEEEecCCccEEEEEE
Q psy4393 40 EWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNF 119 (247)
Q Consensus 40 ~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~ 119 (247)
..++.++.||.+.+.+- .++....+..|.+.+.+-.|+|||.-++++++||.|++|.- +|..-..+......|.|++|
T Consensus 76 d~~~i~s~DGkf~il~k-~~rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSr-sGMLRStl~Q~~~~v~c~~W 153 (737)
T KOG1524|consen 76 DTLLICSNDGRFVILNK-SARVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSR-SGMLRSTVVQNEESIRCARW 153 (737)
T ss_pred ceEEEEcCCceEEEecc-cchhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEec-cchHHHHHhhcCceeEEEEE
Confidence 35777889999888764 56777888899999999999999999999999999999995 34333334445677999999
Q ss_pred cCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCCCe
Q psy4393 120 NPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199 (247)
Q Consensus 120 ~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v 199 (247)
.|+.+.++.+. .+++.+=-+.....+-..++|++.|.++.|++...++++|++|-..++||..... +.. ...+..+|
T Consensus 154 ~p~S~~vl~c~-g~h~~IKpL~~n~k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~G~~-Lf~-S~~~ey~I 230 (737)
T KOG1524|consen 154 APNSNSIVFCQ-GGHISIKPLAANSKIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQGAN-LFT-SAAEEYAI 230 (737)
T ss_pred CCCCCceEEec-CCeEEEeecccccceeEEeccCcEEEEeecCccccceeecCCceeEEeecccCcc-ccc-CChhccce
Confidence 99988777653 4667776776666677889999999999999999999999999999999976432 322 23456789
Q ss_pred EEEEECCCCCEEEEEEcCCeEEEEEC
Q psy4393 200 SFVKFSPNGKYILAATLDNTLKLWDS 225 (247)
Q Consensus 200 ~~~~~s~~~~~l~~~~~dg~i~vwd~ 225 (247)
++++|+|+ +.++.++. +++|+=..
T Consensus 231 TSva~npd-~~~~v~S~-nt~R~~~p 254 (737)
T KOG1524|consen 231 TSVAFNPE-KDYLLWSY-NTARFSSP 254 (737)
T ss_pred eeeeeccc-cceeeeee-eeeeecCC
Confidence 99999999 55555553 45664333
No 208
>KOG1963|consensus
Probab=99.69 E-value=1.3e-14 Score=121.37 Aligned_cols=204 Identities=22% Similarity=0.443 Sum_probs=161.8
Q ss_pred EecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCC---CEEEEEcCCCeEEEEECC
Q psy4393 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS---RLLVSGSDDKTLKIWELS 99 (247)
Q Consensus 23 ~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~d~~i~v~d~~ 99 (247)
+.+-...-....|++|+++++.+. +..|.||...++.+...+..|..++..+.+.|.. ..+++++.+|.|++||..
T Consensus 12 lgg~n~~~~~avfSnD~k~l~~~~-~~~V~VyS~~Tg~~i~~l~~~~a~l~s~~~~~~~~~~~~~~~~sl~G~I~vwd~~ 90 (792)
T KOG1963|consen 12 LGGRNGNKSPAVFSNDAKFLFLCT-GNFVKVYSTATGECITSLEDHTAPLTSVIVLPSSENANYLIVCSLDGTIRVWDWS 90 (792)
T ss_pred eccccceecccccccCCcEEEEee-CCEEEEEecchHhhhhhcccccCccceeeecCCCccceEEEEEecCccEEEecCC
Confidence 434444444567999999888764 5689999999999999999999999999998754 356789999999999976
Q ss_pred CceEEEEEe-----------------------------------------------------------------------
Q psy4393 100 SGKCLKTLK----------------------------------------------------------------------- 108 (247)
Q Consensus 100 ~~~~~~~~~----------------------------------------------------------------------- 108 (247)
.+..++.+.
T Consensus 91 ~~~Llkt~~~~~~v~~~~~~~~~a~~s~~~~~s~~~~~~~~~~s~~~~~q~~~~~~~t~~~~~~d~~~~~~~~~~I~~~~ 170 (792)
T KOG1963|consen 91 DGELLKTFDNNLPVHALVYKPAQADISANVYVSVEDYSILTTFSKKLSKQSSRFVLATFDSAKGDFLKEHQEPKSIVDNN 170 (792)
T ss_pred CcEEEEEEecCCceeEEEechhHhCccceeEeecccceeeeecccccccceeeeEeeeccccchhhhhhhcCCccEEEcC
Confidence 543322210
Q ss_pred --------------------------------cCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCC--C--eEEEeecCC
Q psy4393 109 --------------------------------GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT--G--KCLKTLPAH 152 (247)
Q Consensus 109 --------------------------------~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~--~--~~~~~~~~~ 152 (247)
.|...+.+.+++|.+.++++|..||.|.+|.--. + .....+..|
T Consensus 171 ~ge~~~i~~~~~~~~~~v~~~~~~~~~~~~~~~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH 250 (792)
T KOG1963|consen 171 SGEFKGIVHMCKIHIYFVPKHTKHTSSRDITVHHTFNITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWH 250 (792)
T ss_pred CceEEEEEEeeeEEEEEecccceeeccchhhhhhcccceeEEeccccceEEEeccCCcEEEEeccccccccccceEEEec
Confidence 0112245678899999999999999999995432 1 234556778
Q ss_pred CCCeEEEEECCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcc
Q psy4393 153 SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVT 229 (247)
Q Consensus 153 ~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~ 229 (247)
...|.++.|+++|.+|++|+.+|.+.+|.+.+++ +.++..-+++|..+.++||+.+.+...+|+.|.+-...++.
T Consensus 251 ~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~--kqfLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl~ 325 (792)
T KOG1963|consen 251 HDEVNSLSFSSDGAYLLSGGREGVLVLWQLETGK--KQFLPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKASDLE 325 (792)
T ss_pred ccccceeEEecCCceEeecccceEEEEEeecCCC--cccccccCCeeEEEEEcCCCCeEEEEecCceEEEEeccchh
Confidence 8899999999999999999999999999999887 55666677899999999999999999999999999875544
No 209
>KOG2394|consensus
Probab=99.69 E-value=1.3e-15 Score=121.24 Aligned_cols=168 Identities=18% Similarity=0.264 Sum_probs=123.2
Q ss_pred CCCCEEEEEeCCCeEEEEecCCCeEEEEE----ecccCCeEEEEECCC-CCEEEEEcCCCeEEEEECCC-----------
Q psy4393 37 PNGEWLASSSADKLIKIWGAYDGKFEKTI----SGHKLGISDVAWSSD-SRLLVSGSDDKTLKIWELSS----------- 100 (247)
Q Consensus 37 ~~~~~l~~~~~dg~v~iw~~~~~~~~~~~----~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~v~d~~~----------- 100 (247)
|.+--|+.+-..|.|++.|....+....+ ......|+++.|-|. ...++++-.+|.+.+||...
T Consensus 183 ~~g~dllIGf~tGqvq~idp~~~~~sklfne~r~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~ 262 (636)
T KOG2394|consen 183 PKGLDLLIGFTTGQVQLIDPINFEVSKLFNEERLINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQA 262 (636)
T ss_pred CCCcceEEeeccCceEEecchhhHHHHhhhhcccccccceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCcccc
Confidence 34445666777888888876542221111 123467999999984 44566777899999997531
Q ss_pred ---ceEEE--------------EEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECC
Q psy4393 101 ---GKCLK--------------TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNR 163 (247)
Q Consensus 101 ---~~~~~--------------~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~ 163 (247)
+.... .+.-..+.|...+|+|||++||+.+.||.++|||..+.+.+..++..-+...|++|+|
T Consensus 263 ~k~~~~f~i~t~ksk~~rNPv~~w~~~~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvcWSP 342 (636)
T KOG2394|consen 263 LKDGDQFAILTSKSKKTRNPVARWHIGEGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVCWSP 342 (636)
T ss_pred cCCCCeeEEeeeeccccCCccceeEeccccccceeEcCCCceEEEEecCceEEEeeccHHHHHHHHHhhccceEEEEEcC
Confidence 11111 1111233577789999999999999999999999988777777777778899999999
Q ss_pred CCCEEEEecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEEC
Q psy4393 164 DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 205 (247)
Q Consensus 164 ~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s 205 (247)
||+++++|++|..|.||.+...+.+.. -..|.+-|+.++|+
T Consensus 343 DGKyIvtGGEDDLVtVwSf~erRVVAR-GqGHkSWVs~VaFD 383 (636)
T KOG2394|consen 343 DGKYIVTGGEDDLVTVWSFEERRVVAR-GQGHKSWVSVVAFD 383 (636)
T ss_pred CccEEEecCCcceEEEEEeccceEEEe-ccccccceeeEeec
Confidence 999999999999999999988776554 44566778888887
No 210
>KOG0771|consensus
Probab=99.69 E-value=1.1e-15 Score=118.13 Aligned_cols=158 Identities=26% Similarity=0.379 Sum_probs=117.8
Q ss_pred EEEEECCCCCEEEEEcCCCeEEEEECCCceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCC
Q psy4393 73 SDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAH 152 (247)
Q Consensus 73 ~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~ 152 (247)
..++|+++|..+++++.||.+|+|+..+...+.....|...|.++.|+|+++++++-+.| ..+||+.+++..+......
T Consensus 148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t~~ 226 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKTPF 226 (398)
T ss_pred eEEEEcCCCCEeeeccccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcCCc
Confidence 568999999999999999999999987766666777888899999999999999999999 8999999999666554422
Q ss_pred --CCCeEEEEECCCC---CEE--EEecCCCeEEEEeCCCcee---eeee-ccCCCCCeEEEEECCCCCEEEEEEcCCeEE
Q psy4393 153 --SDPVSAVHFNRDG---SLI--VSSSYDGLCRIWDTASGQC---LKTL-IDDDNPPVSFVKFSPNGKYILAATLDNTLK 221 (247)
Q Consensus 153 --~~~i~~~~~~~~~---~~l--~~~~~dg~i~v~d~~~~~~---~~~~-~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~ 221 (247)
......+.|+.++ .++ +.....+.+..||+..... ++.. .......|++++.++||++++.|+.||.|.
T Consensus 227 ~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGsVa 306 (398)
T KOG0771|consen 227 SKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDGSVA 306 (398)
T ss_pred ccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccCCcEE
Confidence 2234556777665 222 2223345666666543322 1111 111234689999999999999999999999
Q ss_pred EEECCCcceE
Q psy4393 222 LWDSKVVTPA 231 (247)
Q Consensus 222 vwd~~~~~~~ 231 (247)
|++....+.+
T Consensus 307 i~~~~~lq~~ 316 (398)
T KOG0771|consen 307 IYDAKSLQRL 316 (398)
T ss_pred EEEeceeeee
Confidence 9999877643
No 211
>KOG1517|consensus
Probab=99.67 E-value=4.8e-15 Score=126.31 Aligned_cols=194 Identities=18% Similarity=0.301 Sum_probs=144.3
Q ss_pred EEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEec-ccCCeEEEEECC-CCCEEEEEcCCCeEEEEECCCc---eEEEE
Q psy4393 32 SVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG-HKLGISDVAWSS-DSRLLVSGSDDKTLKIWELSSG---KCLKT 106 (247)
Q Consensus 32 ~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~-~~~~v~~~~~~~-~~~~l~~~~~d~~i~v~d~~~~---~~~~~ 106 (247)
-+.|.....+|++++.-..|+|||.+.......+.. ....++++.-+- .|+.+++|-.||.+++||.+.. ..+..
T Consensus 1170 v~dWqQ~~G~Ll~tGd~r~IRIWDa~~E~~~~diP~~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~ 1249 (1387)
T KOG1517|consen 1170 VVDWQQQSGHLLVTGDVRSIRIWDAHKEQVVADIPYGSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCV 1249 (1387)
T ss_pred eeehhhhCCeEEecCCeeEEEEEecccceeEeecccCCCccceeecccccCCceEEEeecCCceEEeecccCCcccccee
Confidence 356777666666666678999999987776665543 334466665443 4789999999999999998753 24556
Q ss_pred EecCCcc--EEEEEEcCCCC-EEEEeeCCCCEEEEECCCCeEEE--eecCCC--C-CeEEEEECCCCCEEEEecCCCeEE
Q psy4393 107 LKGHSNY--VFCCNFNPQSN-LIVSGSFDESVRIWDVRTGKCLK--TLPAHS--D-PVSAVHFNRDGSLIVSSSYDGLCR 178 (247)
Q Consensus 107 ~~~~~~~--v~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~~~~--~~~~~~--~-~i~~~~~~~~~~~l~~~~~dg~i~ 178 (247)
.+.|... |..+.+.+.|- .+++|+.+|.|++||+|...... .+..|. + ..+++..+++...+|+|+. +.|.
T Consensus 1250 ~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~~yGs~lTal~VH~hapiiAsGs~-q~ik 1328 (1387)
T KOG1517|consen 1250 YREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFLTIVAHWEYGSALTALTVHEHAPIIASGSA-QLIK 1328 (1387)
T ss_pred ecccCCcccceeEEeecCCCcceeeeccCCeEEEEecccCcccccceeeeccccCccceeeeeccCCCeeeecCc-ceEE
Confidence 6777766 88888888664 49999999999999999842221 222222 3 4899999999999999988 9999
Q ss_pred EEeCCCceeee-----eeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECC
Q psy4393 179 IWDTASGQCLK-----TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSK 226 (247)
Q Consensus 179 v~d~~~~~~~~-----~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~ 226 (247)
||++...+... .+.....+.+.+++|||..-+||+|..|.+|.||...
T Consensus 1329 Iy~~~G~~l~~~k~n~~F~~q~~gs~scL~FHP~~~llAaG~~Ds~V~iYs~~ 1381 (1387)
T KOG1517|consen 1329 IYSLSGEQLNIIKYNPGFMGQRIGSVSCLAFHPHRLLLAAGSADSTVSIYSCE 1381 (1387)
T ss_pred EEecChhhhcccccCcccccCcCCCcceeeecchhHhhhhccCCceEEEeecC
Confidence 99987543221 1222334567999999999999999999999999653
No 212
>KOG4227|consensus
Probab=99.65 E-value=2.6e-14 Score=110.16 Aligned_cols=205 Identities=17% Similarity=0.236 Sum_probs=151.3
Q ss_pred EecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCC------CeEEEEEe-cccCCeEEEEECCCCCEEEEEcCCCeEEE
Q psy4393 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD------GKFEKTIS-GHKLGISDVAWSSDSRLLVSGSDDKTLKI 95 (247)
Q Consensus 23 ~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~------~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~v 95 (247)
+.+|.+-|.++.|+.++++|++|+.|-.+++|.+.. .+...... .|...|.+++|.....++.+|..+++|..
T Consensus 52 ~~~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~VI~ 131 (609)
T KOG4227|consen 52 VREHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGTVIK 131 (609)
T ss_pred hhhhccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCcceeEe
Confidence 347999999999999999999999999999999753 22233222 34577999999998999999999999999
Q ss_pred EECCCceEEEEEec--CCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCe-EEE--eecCCCCCeEEEEECCCC-CEEE
Q psy4393 96 WELSSGKCLKTLKG--HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK-CLK--TLPAHSDPVSAVHFNRDG-SLIV 169 (247)
Q Consensus 96 ~d~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~-~~~--~~~~~~~~i~~~~~~~~~-~~l~ 169 (247)
.|+++.+.+..+.. ..+.|..+..+|..+.+++.+.++.|.+||.+..+ .+. ...........+-|+|-. .+|+
T Consensus 132 HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t~~F~P~~P~Li~ 211 (609)
T KOG4227|consen 132 HDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVLPANSGKNFYTAEFHPETPALIL 211 (609)
T ss_pred eecccceeeeeecccCcccceeecccCCCCceEEEEecCceEEEEeccCCCCCCceeeecCCCccceeeeecCCCceeEE
Confidence 99999887655542 23579999999999999999999999999998654 221 122233456778899865 4778
Q ss_pred EecCCCeEEEEeCCCceeee-ee-----ccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCC
Q psy4393 170 SSSYDGLCRIWDTASGQCLK-TL-----IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKV 227 (247)
Q Consensus 170 ~~~~dg~i~v~d~~~~~~~~-~~-----~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~ 227 (247)
+.+..+-+.+||.+..+... .. +...........|+|+|..|++--...-=.+||.-.
T Consensus 212 ~~~~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~~G~Q~msiRR~~~P~~~D~~S 275 (609)
T KOG4227|consen 212 VNSETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWSPSGNQFMSIRRGKCPLYFDFIS 275 (609)
T ss_pred eccccCCCCceeeccccchHHhhhccccCcccchhhhheeeCCCCCeehhhhccCCCEEeeeec
Confidence 88888999999998654211 10 111123345678999998887765544445566544
No 213
>KOG4497|consensus
Probab=99.65 E-value=3.8e-15 Score=112.22 Aligned_cols=200 Identities=18% Similarity=0.326 Sum_probs=144.1
Q ss_pred CCeEEEEECCCCCEEEE-EeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEc-CCCeEEEEECCCceEEE
Q psy4393 28 KAVSSVKFSPNGEWLAS-SSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGS-DDKTLKIWELSSGKCLK 105 (247)
Q Consensus 28 ~~v~~~~~s~~~~~l~~-~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~v~d~~~~~~~~ 105 (247)
..|.-+.|..|..+++. +..++.|.+|++...+.-.++.....++..+.|+|||+.|+..+ -+-.|.+|.+.+.+...
T Consensus 49 dki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ckIdeg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~ 128 (447)
T KOG4497|consen 49 DKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEWYCKIDEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYL 128 (447)
T ss_pred HHhhheeeeccceeeeeeeeccceEEEEEeecceeEEEeccCCCcceeeeECCCcceEeeeecceeEEEEEEeccceeEE
Confidence 34566788888887654 56788999999999988889988888999999999998776554 47789999998876543
Q ss_pred EEecCCccEEEEEEcCCCCEEEEeeCCCC---EEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCCCeEEEEeC
Q psy4393 106 TLKGHSNYVFCCNFNPQSNLIVSGSFDES---VRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 182 (247)
Q Consensus 106 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~---i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~ 182 (247)
++-....+..++|+|+|++.+..+.-.. +.+........++.++...-..+.+.|+|||..|+ +||.
T Consensus 129 -~~~pK~~~kg~~f~~dg~f~ai~sRrDCkdyv~i~~c~~W~ll~~f~~dT~DltgieWsPdg~~la---------Vwd~ 198 (447)
T KOG4497|consen 129 -LPHPKTNVKGYAFHPDGQFCAILSRRDCKDYVQISSCKAWILLKEFKLDTIDLTGIEWSPDGNWLA---------VWDN 198 (447)
T ss_pred -ecccccCceeEEECCCCceeeeeecccHHHHHHHHhhHHHHHHHhcCCCcccccCceECCCCcEEE---------Eecc
Confidence 3333344677899999999988765432 22222222333455555555678899999999887 4543
Q ss_pred CCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcceEEEEccCCc
Q psy4393 183 ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTPLN 239 (247)
Q Consensus 183 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~ 239 (247)
--.. +.+..+.+..+..++|+|.+++|+.|+.|+.+||.+--+.+++..+..+.+
T Consensus 199 ~Ley--kv~aYe~~lG~k~v~wsP~~qflavGsyD~~lrvlnh~tWk~f~eflhl~s 253 (447)
T KOG4497|consen 199 VLEY--KVYAYERGLGLKFVEWSPCNQFLAVGSYDQMLRVLNHFTWKPFGEFLHLCS 253 (447)
T ss_pred hhhh--eeeeeeeccceeEEEeccccceEEeeccchhhhhhceeeeeehhhhccchh
Confidence 2111 111223345678899999999999999999999998877777766655444
No 214
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.65 E-value=4.7e-13 Score=110.31 Aligned_cols=200 Identities=22% Similarity=0.217 Sum_probs=135.3
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCC---CeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEE-EcCCC--eEEEEEC
Q psy4393 25 GHTKAVSSVKFSPNGEWLASSSAD---KLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVS-GSDDK--TLKIWEL 98 (247)
Q Consensus 25 ~h~~~v~~~~~s~~~~~l~~~~~d---g~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d~--~i~v~d~ 98 (247)
.+...+.+.+|+|||++|+.+... ..|++|+..+++... +..+...+..++|+|||+.|+. .+.++ .|++||+
T Consensus 187 ~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~-~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~i~~~d~ 265 (417)
T TIGR02800 187 RSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREK-VASFPGMNGAPAFSPDGSKLAVSLSKDGNPDIYVMDL 265 (417)
T ss_pred cCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEE-eecCCCCccceEECCCCCEEEEEECCCCCccEEEEEC
Confidence 455678899999999999876543 479999998775433 3334445667899999997764 44443 5888998
Q ss_pred CCceEEEEEecCCccEEEEEEcCCCCEEEEeeC-CC--CEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCCC
Q psy4393 99 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF-DE--SVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 175 (247)
Q Consensus 99 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~--~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg 175 (247)
.++... .+..+........|+|+++.++..+. ++ .|+++|+.+++. ..+..+........|+|++++++.++.++
T Consensus 266 ~~~~~~-~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~i~~~~~~~ 343 (417)
T TIGR02800 266 DGKQLT-RLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEV-RRLTFRGGYNASPSWSPDGDLIAFVHREG 343 (417)
T ss_pred CCCCEE-ECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCE-EEeecCCCCccCeEECCCCCEEEEEEccC
Confidence 876543 33333333445689999998876654 33 578888877653 33333445566789999999998887765
Q ss_pred ---eEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCC---eEEEEECCCcce
Q psy4393 176 ---LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN---TLKLWDSKVVTP 230 (247)
Q Consensus 176 ---~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg---~i~vwd~~~~~~ 230 (247)
.|.+||+.++... .+... .......|+|||++|+..+.++ .+.+.+......
T Consensus 344 ~~~~i~~~d~~~~~~~-~l~~~--~~~~~p~~spdg~~l~~~~~~~~~~~l~~~~~~g~~~ 401 (417)
T TIGR02800 344 GGFNIAVMDLDGGGER-VLTDT--GLDESPSFAPNGRMILYATTRGGRGVLGLVSTDGRFR 401 (417)
T ss_pred CceEEEEEeCCCCCeE-EccCC--CCCCCceECCCCCEEEEEEeCCCcEEEEEEECCCcee
Confidence 7889998875432 22211 1223468999999998887654 566666554333
No 215
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.65 E-value=3.4e-14 Score=117.14 Aligned_cols=177 Identities=16% Similarity=0.160 Sum_probs=120.0
Q ss_pred CCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCC---CeEEEEECCCceEEEEEecCCccEEEEEEcCCCC
Q psy4393 48 DKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDD---KTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSN 124 (247)
Q Consensus 48 dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~ 124 (247)
+..|.+||..... ...+..+...+..+.|+|||+.|+.++.+ ..|++||+.+++... +...........|+|+|+
T Consensus 183 ~~~i~i~d~dg~~-~~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~-l~~~~g~~~~~~wSPDG~ 260 (429)
T PRK01742 183 PYEVRVADYDGFN-QFIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKV-VASFRGHNGAPAFSPDGS 260 (429)
T ss_pred eEEEEEECCCCCC-ceEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEE-EecCCCccCceeECCCCC
Confidence 4688999975444 45566667779999999999999887643 479999998875432 222222334679999999
Q ss_pred EEEEee-CCCCEEE--EECCCCeEEEeecCCCCCeEEEEECCCCCEEEEec-CCCeEEEEeCCCceeeeeeccCCCCCeE
Q psy4393 125 LIVSGS-FDESVRI--WDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSS-YDGLCRIWDTASGQCLKTLIDDDNPPVS 200 (247)
Q Consensus 125 ~l~~~~-~d~~i~v--~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~v~d~~~~~~~~~~~~~~~~~v~ 200 (247)
.++.+. .+|.+.+ ||+.++. ...+..+...+....|+|||+.|+.++ .+|...+|++............ .. .
T Consensus 261 ~La~~~~~~g~~~Iy~~d~~~~~-~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~~~l~~-~~--~ 336 (429)
T PRK01742 261 RLAFASSKDGVLNIYVMGANGGT-PSQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGASLVGG-RG--Y 336 (429)
T ss_pred EEEEEEecCCcEEEEEEECCCCC-eEeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCeEEecC-CC--C
Confidence 888764 5776555 5666554 344555666678899999999776554 5677777765432111222222 22 3
Q ss_pred EEEECCCCCEEEEEEcCCeEEEEECCCcceE
Q psy4393 201 FVKFSPNGKYILAATLDNTLKLWDSKVVTPA 231 (247)
Q Consensus 201 ~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~ 231 (247)
...|+|||++|+.++.++ +.+||..++...
T Consensus 337 ~~~~SpDG~~ia~~~~~~-i~~~Dl~~g~~~ 366 (429)
T PRK01742 337 SAQISADGKTLVMINGDN-VVKQDLTSGSTE 366 (429)
T ss_pred CccCCCCCCEEEEEcCCC-EEEEECCCCCeE
Confidence 478999999999887765 555998877654
No 216
>KOG1587|consensus
Probab=99.64 E-value=4.3e-14 Score=117.15 Aligned_cols=210 Identities=20% Similarity=0.239 Sum_probs=152.4
Q ss_pred eEEEEEecCCCCeEEEEECCCCC--EEEEEeCCCeEEEEecCCCeEE------EEEe------cccCCeEEEEECC-CCC
Q psy4393 18 VLKFTLAGHTKAVSSVKFSPNGE--WLASSSADKLIKIWGAYDGKFE------KTIS------GHKLGISDVAWSS-DSR 82 (247)
Q Consensus 18 ~~~~~~~~h~~~v~~~~~s~~~~--~l~~~~~dg~v~iw~~~~~~~~------~~~~------~~~~~v~~~~~~~-~~~ 82 (247)
.+......|..+|+.+.|..+.. -+++++.||.|..|+...-... .... ....+++.+.|.+ +-.
T Consensus 282 ~ls~~~~sh~~~v~~vvW~~~~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~ 361 (555)
T KOG1587|consen 282 GLSALEVSHSEPVTAVVWLQNEHNTEFFSLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPN 361 (555)
T ss_pred ccccccccCCcCeEEEEEeccCCCCceEEEecCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccCCCc
Confidence 34445567999999999976544 4889999999999987532210 0111 1234588899987 446
Q ss_pred EEEEEcCCCeEEEEECCCceE--------EEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECC-CCeEEEeecCCC
Q psy4393 83 LLVSGSDDKTLKIWELSSGKC--------LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR-TGKCLKTLPAHS 153 (247)
Q Consensus 83 ~l~~~~~d~~i~v~d~~~~~~--------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~-~~~~~~~~~~~~ 153 (247)
.++.|+..|.|.--+-..... ...+..|.+.|..+.++|-+..++..+.|..+++|... ...++..+..+.
T Consensus 362 ~FiVGTe~G~v~~~~r~g~~~~~~~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~gDW~vriWs~~~~~~Pl~~~~~~~ 441 (555)
T KOG1587|consen 362 HFIVGTEEGKVYKGCRKGYTPAPEVSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVGDWTVRIWSEDVIASPLLSLDSSP 441 (555)
T ss_pred eEEEEcCCcEEEEEeccCCcccccccccccccccccCcceEeeecCCCccceeeeeccceeEeccccCCCCcchhhhhcc
Confidence 788999999887644332211 22445678899999999988777666669999999987 556666777777
Q ss_pred CCeEEEEECCCCC-EEEEecCCCeEEEEeCCCceeeeeecc-CCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCC
Q psy4393 154 DPVSAVHFNRDGS-LIVSSSYDGLCRIWDTASGQCLKTLID-DDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKV 227 (247)
Q Consensus 154 ~~i~~~~~~~~~~-~l~~~~~dg~i~v~d~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~ 227 (247)
..+++++|+|... .++++..+|.+.+||+........... ........+.|+++|+.|++|...|++++|++..
T Consensus 442 ~~v~~vaWSptrpavF~~~d~~G~l~iWDLl~~~~~Pv~s~~~~~~~l~~~~~s~~g~~lavGd~~G~~~~~~l~~ 517 (555)
T KOG1587|consen 442 DYVTDVAWSPTRPAVFATVDGDGNLDIWDLLQDDEEPVLSQKVCSPALTRVRWSPNGKLLAVGDANGTTHILKLSE 517 (555)
T ss_pred ceeeeeEEcCcCceEEEEEcCCCceehhhhhccccCCcccccccccccceeecCCCCcEEEEecCCCcEEEEEcCc
Confidence 7899999999654 677888899999999876443222211 1244567788999999999999999999999854
No 217
>KOG2139|consensus
Probab=99.64 E-value=8.7e-14 Score=106.09 Aligned_cols=192 Identities=21% Similarity=0.386 Sum_probs=135.5
Q ss_pred CCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEe-cccCCeEEEEECCC-CCEEEEEcCCCeEEEEECCCc-eE-
Q psy4393 28 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS-GHKLGISDVAWSSD-SRLLVSGSDDKTLKIWELSSG-KC- 103 (247)
Q Consensus 28 ~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~-~~~~~v~~~~~~~~-~~~l~~~~~d~~i~v~d~~~~-~~- 103 (247)
-.+..++|++.-..+|.+..|..|++|+... .....++ .....|++++|.|. ++.++.|+..| |.+|..... ..
T Consensus 99 ~dlr~~aWhqH~~~fava~nddvVriy~kss-t~pt~Lks~sQrnvtclawRPlsaselavgCr~g-IciW~~s~tln~~ 176 (445)
T KOG2139|consen 99 IDLRGVAWHQHIIAFAVATNDDVVRIYDKSS-TCPTKLKSVSQRNVTCLAWRPLSASELAVGCRAG-ICIWSDSRTLNAN 176 (445)
T ss_pred cceeeEeechhhhhhhhhccCcEEEEeccCC-CCCceecchhhcceeEEEeccCCcceeeeeecce-eEEEEcCcccccc
Confidence 4567889998666678889999999999766 3333333 33456999999995 45566666554 778976421 11
Q ss_pred ------------EEEEecCCccEEEEEEcCCCCEEEEeeC-CCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEE
Q psy4393 104 ------------LKTLKGHSNYVFCCNFNPQSNLIVSGSF-DESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVS 170 (247)
Q Consensus 104 ------------~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 170 (247)
+..-.+| .+|..+.|+++|..+++++- +..|.+||..++..+.-.....+.++-+.|+||+.+|++
T Consensus 177 r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg~slLkwSPdgd~lfa 255 (445)
T KOG2139|consen 177 RNIRMMSTHHLQVLQDPGH-NPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGDVLFA 255 (445)
T ss_pred cccccccccchhheeCCCC-ceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcccccccCCCceeeEEEcCCCCEEEE
Confidence 1111223 57899999999999998864 567999999998876555455677889999999999999
Q ss_pred ecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEE
Q psy4393 171 SSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224 (247)
Q Consensus 171 ~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd 224 (247)
++-|+..++|+............. .+.|....|+|+|++|+.+.. |.=++|.
T Consensus 256 At~davfrlw~e~q~wt~erw~lg-sgrvqtacWspcGsfLLf~~s-gsp~lys 307 (445)
T KOG2139|consen 256 ATCDAVFRLWQENQSWTKERWILG-SGRVQTACWSPCGSFLLFACS-GSPRLYS 307 (445)
T ss_pred ecccceeeeehhcccceecceecc-CCceeeeeecCCCCEEEEEEc-CCceEEE
Confidence 999999999965432222222222 237888899999998876653 3333443
No 218
>KOG1517|consensus
Probab=99.64 E-value=3.6e-14 Score=121.11 Aligned_cols=201 Identities=20% Similarity=0.314 Sum_probs=140.5
Q ss_pred CCeEEEEECC--CCCEEEEEeCCCeEEEEecCCC-----eEEEEE---ec----ccCCeEEEEECCCCCEEEEEcCCCeE
Q psy4393 28 KAVSSVKFSP--NGEWLASSSADKLIKIWGAYDG-----KFEKTI---SG----HKLGISDVAWSSDSRLLVSGSDDKTL 93 (247)
Q Consensus 28 ~~v~~~~~s~--~~~~l~~~~~dg~v~iw~~~~~-----~~~~~~---~~----~~~~v~~~~~~~~~~~l~~~~~d~~i 93 (247)
..|+.+.+-. |..++++|+.||.|+||+-... +.+.-. .+ ..+.-.-+.|-.....|+++++-..|
T Consensus 1110 t~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y~~~~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~I 1189 (1387)
T KOG1517|consen 1110 TRVSDLELINEQDDALLLTASSDGVIRIWKDYADKWKKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDVRSI 1189 (1387)
T ss_pred CccceeeeecccchhheeeeccCceEEEecccccccCCceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCCeeEE
Confidence 5688888754 4557889999999999975422 111111 11 11111235677666677777778999
Q ss_pred EEEECCCceEEEEEecCC-ccEEEEEEc-CCCCEEEEeeCCCCEEEEECCCCe---EEEeecCCCCC--eEEEEECCCCC
Q psy4393 94 KIWELSSGKCLKTLKGHS-NYVFCCNFN-PQSNLIVSGSFDESVRIWDVRTGK---CLKTLPAHSDP--VSAVHFNRDGS 166 (247)
Q Consensus 94 ~v~d~~~~~~~~~~~~~~-~~v~~~~~~-~~~~~l~~~~~d~~i~v~d~~~~~---~~~~~~~~~~~--i~~~~~~~~~~ 166 (247)
++||.........+.... ..+..+.-+ +.|+.+++|..||.+++||.|... .+...+.|... |..+.+.+.|-
T Consensus 1190 RIWDa~~E~~~~diP~~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~ 1269 (1387)
T KOG1517|consen 1190 RIWDAHKEQVVADIPYGSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGL 1269 (1387)
T ss_pred EEEecccceeEeecccCCCccceeecccccCCceEEEeecCCceEEeecccCCccccceeecccCCcccceeEEeecCCC
Confidence 999998877766554332 234443322 347999999999999999998654 35566677665 88888888665
Q ss_pred -EEEEecCCCeEEEEeCCCceeeee--eccCC--CCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcc
Q psy4393 167 -LIVSSSYDGLCRIWDTASGQCLKT--LIDDD--NPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVT 229 (247)
Q Consensus 167 -~l~~~~~dg~i~v~d~~~~~~~~~--~~~~~--~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~ 229 (247)
.|++|+.+|.|++||++....... ...+. ++..+++..|++...+|+|+. +.|+||+....+
T Consensus 1270 ~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~~yGs~lTal~VH~hapiiAsGs~-q~ikIy~~~G~~ 1336 (1387)
T KOG1517|consen 1270 GELVSGSQDGDIQLLDLRMSSKETFLTIVAHWEYGSALTALTVHEHAPIIASGSA-QLIKIYSLSGEQ 1336 (1387)
T ss_pred cceeeeccCCeEEEEecccCcccccceeeeccccCccceeeeeccCCCeeeecCc-ceEEEEecChhh
Confidence 499999999999999998421111 11111 234899999999999999998 999999986543
No 219
>KOG1963|consensus
Probab=99.63 E-value=1.8e-13 Score=114.58 Aligned_cols=159 Identities=21% Similarity=0.341 Sum_probs=119.3
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCC--C--eEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCC
Q psy4393 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD--G--KFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSS 100 (247)
Q Consensus 25 ~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~--~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~ 100 (247)
.|...+++.+++|+++++|+|..||.|.+|.-.. . ..-..+.-|...|.+++|+++|.+|++|+..|.+.+|.+.+
T Consensus 203 ~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T 282 (792)
T KOG1963|consen 203 HHTFNITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLET 282 (792)
T ss_pred hhcccceeEEeccccceEEEeccCCcEEEEeccccccccccceEEEecccccceeEEecCCceEeecccceEEEEEeecC
Confidence 3667789999999999999999999999997543 1 12345677888999999999999999999999999999999
Q ss_pred ceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEe---ecCC--------CCCeEEEEECCCCCEEE
Q psy4393 101 GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKT---LPAH--------SDPVSAVHFNRDGSLIV 169 (247)
Q Consensus 101 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~---~~~~--------~~~i~~~~~~~~~~~l~ 169 (247)
++ .+-+..-.++|..+.++||+.+.+....|..|++....+-..... +... .+-.+.++++|..+.++
T Consensus 283 ~~-kqfLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl~~k~tIsgi~~~~~~~k~~~~~l~t~~~idpr~~~~v 361 (792)
T KOG1963|consen 283 GK-KQFLPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKASDLEIKSTISGIKPPTPSTKTRPQSLTTGVSIDPRTNSLV 361 (792)
T ss_pred CC-cccccccCCeeEEEEEcCCCCeEEEEecCceEEEEeccchhhhhhccCccCCCccccccccccceeEEEcCCCCcee
Confidence 87 344555677899999999999999999999999887643222111 1111 22344556666545555
Q ss_pred EecCCCeEEEEeCCC
Q psy4393 170 SSSYDGLCRIWDTAS 184 (247)
Q Consensus 170 ~~~~dg~i~v~d~~~ 184 (247)
-.+..|.|.+||+-+
T Consensus 362 ln~~~g~vQ~ydl~t 376 (792)
T KOG1963|consen 362 LNGHPGHVQFYDLYT 376 (792)
T ss_pred ecCCCceEEEEeccc
Confidence 555666666666544
No 220
>PRK00178 tolB translocation protein TolB; Provisional
Probab=99.63 E-value=1.4e-12 Score=107.93 Aligned_cols=201 Identities=19% Similarity=0.179 Sum_probs=131.8
Q ss_pred ecCCCCeEEEEECCCCCEEEEEeCC---CeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEE-EcCCC--eEEEEE
Q psy4393 24 AGHTKAVSSVKFSPNGEWLASSSAD---KLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVS-GSDDK--TLKIWE 97 (247)
Q Consensus 24 ~~h~~~v~~~~~s~~~~~l~~~~~d---g~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d~--~i~v~d 97 (247)
..+...+....|+|||+.|+..+.+ ..|.+|+..+++... +...........|+|||+.|+. ...++ .|.++|
T Consensus 195 ~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~-l~~~~g~~~~~~~SpDG~~la~~~~~~g~~~Iy~~d 273 (430)
T PRK00178 195 LQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQ-ITNFEGLNGAPAWSPDGSKLAFVLSKDGNPEIYVMD 273 (430)
T ss_pred ecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEE-ccCCCCCcCCeEECCCCCEEEEEEccCCCceEEEEE
Confidence 3466778999999999998765533 368888987775543 3333334556899999998864 44444 688889
Q ss_pred CCCceEEEEEecCCccEEEEEEcCCCCEEEEeeC-CC--CEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCC
Q psy4393 98 LSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF-DE--SVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 174 (247)
Q Consensus 98 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~--~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 174 (247)
+.+++.. .+..+........|+|+++.++..+. ++ .|+++|+.+++... +...........|+|+|+.++....+
T Consensus 274 ~~~~~~~-~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~~-lt~~~~~~~~~~~Spdg~~i~~~~~~ 351 (430)
T PRK00178 274 LASRQLS-RVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAER-VTFVGNYNARPRLSADGKTLVMVHRQ 351 (430)
T ss_pred CCCCCeE-EcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEEE-eecCCCCccceEECCCCCEEEEEEcc
Confidence 9877643 34444444556789999998876653 33 57777887776432 22222233456899999988776543
Q ss_pred -C--eEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcC---CeEEEEECCCcce
Q psy4393 175 -G--LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD---NTLKLWDSKVVTP 230 (247)
Q Consensus 175 -g--~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---g~i~vwd~~~~~~ 230 (247)
+ .|.++|+.+++.. .+... .......|+|||++++..+.+ ..|.+++.+....
T Consensus 352 ~~~~~l~~~dl~tg~~~-~lt~~--~~~~~p~~spdg~~i~~~~~~~g~~~l~~~~~~g~~~ 410 (430)
T PRK00178 352 DGNFHVAAQDLQRGSVR-ILTDT--SLDESPSVAPNGTMLIYATRQQGRGVLMLVSINGRVR 410 (430)
T ss_pred CCceEEEEEECCCCCEE-EccCC--CCCCCceECCCCCEEEEEEecCCceEEEEEECCCCce
Confidence 3 5788898887542 22221 112245899999999887754 3577777755443
No 221
>PRK01029 tolB translocation protein TolB; Provisional
Probab=99.63 E-value=8.3e-13 Score=108.53 Aligned_cols=207 Identities=16% Similarity=0.085 Sum_probs=129.1
Q ss_pred CCCCeEEEEECCCCCEE---EEEeCCC--eEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcC-CC----eEEE
Q psy4393 26 HTKAVSSVKFSPNGEWL---ASSSADK--LIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSD-DK----TLKI 95 (247)
Q Consensus 26 h~~~v~~~~~s~~~~~l---~~~~~dg--~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~----~i~v 95 (247)
....+.+.+|+|||+.+ ++...+| .|.+.++.+++.. .+..........+|+|||+.|+..+. +| .+..
T Consensus 183 ~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~-~lt~~~g~~~~p~wSPDG~~Laf~s~~~g~~di~~~~ 261 (428)
T PRK01029 183 EHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAGK-KILALQGNQLMPTFSPRKKLLAFISDRYGNPDLFIQS 261 (428)
T ss_pred CCCCcccceEccCCCceEEEEEEccCCCceEEEEECCCCCce-EeecCCCCccceEECCCCCEEEEEECCCCCcceeEEE
Confidence 34566788999999853 2444444 4666677666543 33334445567899999998876543 22 3444
Q ss_pred EECCCc---eEEEEEecCCccEEEEEEcCCCCEEEEee-CCCCEEEE--ECCC-CeEEEeecCCCCCeEEEEECCCCCEE
Q psy4393 96 WELSSG---KCLKTLKGHSNYVFCCNFNPQSNLIVSGS-FDESVRIW--DVRT-GKCLKTLPAHSDPVSAVHFNRDGSLI 168 (247)
Q Consensus 96 ~d~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~v~--d~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l 168 (247)
|++..+ +................|+|+|+.|+..+ .+|...+| ++.. +.....+..+...+....|+|||+.|
T Consensus 262 ~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~~~lt~~~~~~~~p~wSPDG~~L 341 (428)
T PRK01029 262 FSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSPRLLTKKYRNSSCPAWSPDGKKI 341 (428)
T ss_pred eecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECcccccceEEeccCCCCccceeECCCCCEE
Confidence 676542 22222222223335678999999887665 45654444 5432 22233444444456778999999988
Q ss_pred EEecCC---CeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEc---CCeEEEEECCCcceEEEEc
Q psy4393 169 VSSSYD---GLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATL---DNTLKLWDSKVVTPAIICS 235 (247)
Q Consensus 169 ~~~~~d---g~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~---dg~i~vwd~~~~~~~~~~~ 235 (247)
+..+.+ ..|.+||+.+++... +... ...+....|+|||++|+..+. +..|.++|....+...+..
T Consensus 342 af~~~~~g~~~I~v~dl~~g~~~~-Lt~~-~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl~~g~~~~Lt~ 412 (428)
T PRK01029 342 AFCSVIKGVRQICVYDLATGRDYQ-LTTS-PENKESPSWAIDSLHLVYSAGNSNESELYLISLITKKTRKIVI 412 (428)
T ss_pred EEEEcCCCCcEEEEEECCCCCeEE-ccCC-CCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeec
Confidence 766543 378999998886543 2222 234566899999999886553 3578899988776655543
No 222
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=99.62 E-value=4e-12 Score=102.22 Aligned_cols=195 Identities=19% Similarity=0.213 Sum_probs=136.0
Q ss_pred CEE-EEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceEEEEEecCCccEEEEE
Q psy4393 40 EWL-ASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCN 118 (247)
Q Consensus 40 ~~l-~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~ 118 (247)
+++ ++-..++.|.+.|..+.+....+......-..+.++|||+++++++.||.|.++|+.+.+.+..++.... ...++
T Consensus 6 ~l~~V~~~~~~~v~viD~~t~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G~~-~~~i~ 84 (369)
T PF02239_consen 6 NLFYVVERGSGSVAVIDGATNKVVARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKVGGN-PRGIA 84 (369)
T ss_dssp GEEEEEEGGGTEEEEEETTT-SEEEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE-SSE-EEEEE
T ss_pred cEEEEEecCCCEEEEEECCCCeEEEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEecCCC-cceEE
Confidence 344 4455689999999999888888876444344577999999999999999999999999999988886554 56799
Q ss_pred EcCCCCEEEEee-CCCCEEEEECCCCeEEEeecCC-------CCCeEEEEECCCCCEEEEe-cCCCeEEEEeCCCceeee
Q psy4393 119 FNPQSNLIVSGS-FDESVRIWDVRTGKCLKTLPAH-------SDPVSAVHFNRDGSLIVSS-SYDGLCRIWDTASGQCLK 189 (247)
Q Consensus 119 ~~~~~~~l~~~~-~d~~i~v~d~~~~~~~~~~~~~-------~~~i~~~~~~~~~~~l~~~-~~dg~i~v~d~~~~~~~~ 189 (247)
++++|+++++++ ..+.+.++|.++.+.++.+... ...+..+..+|....++.. -..+.|.+.|....+.+.
T Consensus 85 ~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~~~~ 164 (369)
T PF02239_consen 85 VSPDGKYVYVANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPKNLK 164 (369)
T ss_dssp E--TTTEEEEEEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTSSCEE
T ss_pred EcCCCCEEEEEecCCCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEeccccccc
Confidence 999999998775 6889999999999888877543 2356677778887755554 445888888977654443
Q ss_pred eeccCCCCCeEEEEECCCCCEEEEE-EcCCeEEEEECCCcceEEEEc
Q psy4393 190 TLIDDDNPPVSFVKFSPNGKYILAA-TLDNTLKLWDSKVVTPAIICS 235 (247)
Q Consensus 190 ~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~vwd~~~~~~~~~~~ 235 (247)
..............|+|++++++.+ ..++.|-++|.+..+......
T Consensus 165 ~~~i~~g~~~~D~~~dpdgry~~va~~~sn~i~viD~~~~k~v~~i~ 211 (369)
T PF02239_consen 165 VTTIKVGRFPHDGGFDPDGRYFLVAANGSNKIAVIDTKTGKLVALID 211 (369)
T ss_dssp EEEEE--TTEEEEEE-TTSSEEEEEEGGGTEEEEEETTTTEEEEEEE
T ss_pred eeeecccccccccccCcccceeeecccccceeEEEeeccceEEEEee
Confidence 2222233445678999999988775 457899999999887665543
No 223
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.62 E-value=9.4e-13 Score=108.93 Aligned_cols=175 Identities=16% Similarity=0.172 Sum_probs=123.3
Q ss_pred eEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcC---CCeEEEEECCCceEEEEEecCCccEEEEEEcCCCCEE
Q psy4393 50 LIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSD---DKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLI 126 (247)
Q Consensus 50 ~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 126 (247)
.|.++|.. +.....+..+...+....|+|||+.|+..+. +..|.+||+.+++.. .+......+....|+|+|+.+
T Consensus 183 ~l~~~d~d-g~~~~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~-~l~~~~g~~~~~~~SPDG~~l 260 (435)
T PRK05137 183 RLAIMDQD-GANVRYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRE-LVGNFPGMTFAPRFSPDGRKV 260 (435)
T ss_pred EEEEECCC-CCCcEEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEE-EeecCCCcccCcEECCCCCEE
Confidence 67777764 4444556667778999999999999887653 468999999887653 344455566778999999877
Q ss_pred E-EeeCCCC--EEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecC-CC--eEEEEeCCCceeeeeeccCCCCCeE
Q psy4393 127 V-SGSFDES--VRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY-DG--LCRIWDTASGQCLKTLIDDDNPPVS 200 (247)
Q Consensus 127 ~-~~~~d~~--i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-dg--~i~v~d~~~~~~~~~~~~~~~~~v~ 200 (247)
+ +.+.++. |++||+.++.. ..+..+........|+|||+.++..+. +| .|.++|+.+++... +.. ....+.
T Consensus 261 a~~~~~~g~~~Iy~~d~~~~~~-~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~~~-lt~-~~~~~~ 337 (435)
T PRK05137 261 VMSLSQGGNTDIYTMDLRSGTT-TRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNPRR-ISF-GGGRYS 337 (435)
T ss_pred EEEEecCCCceEEEEECCCCce-EEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCeEE-eec-CCCccc
Confidence 6 4455554 77889887754 445555555667899999998876653 33 68888987665433 222 223455
Q ss_pred EEEECCCCCEEEEEEcC---CeEEEEECCCcc
Q psy4393 201 FVKFSPNGKYILAATLD---NTLKLWDSKVVT 229 (247)
Q Consensus 201 ~~~~s~~~~~l~~~~~d---g~i~vwd~~~~~ 229 (247)
...|+|||++|+..+.+ ..|.+||.....
T Consensus 338 ~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~ 369 (435)
T PRK05137 338 TPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSG 369 (435)
T ss_pred CeEECCCCCEEEEEEcCCCceEEEEEECCCCc
Confidence 67899999999887653 368888875544
No 224
>KOG1587|consensus
Probab=99.61 E-value=1.3e-13 Score=114.25 Aligned_cols=201 Identities=22% Similarity=0.261 Sum_probs=139.9
Q ss_pred CCCeEEEEECC-CCCEEEEEeCCCeEEEEecCCCeE--EE----EEecccCCeEEEEECCCC--CEEEEEcCCCeEEEEE
Q psy4393 27 TKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGKF--EK----TISGHKLGISDVAWSSDS--RLLVSGSDDKTLKIWE 97 (247)
Q Consensus 27 ~~~v~~~~~s~-~~~~l~~~~~dg~v~iw~~~~~~~--~~----~~~~~~~~v~~~~~~~~~--~~l~~~~~d~~i~v~d 97 (247)
...|++++|+| +..+++.|..+|.|.+||...+.. .. ....|..++..+.|..+- .-+++++.||.|..|+
T Consensus 242 ~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~~~~~~~~f~s~ssDG~i~~W~ 321 (555)
T KOG1587|consen 242 PSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWLQNEHNTEFFSLSSDGSICSWD 321 (555)
T ss_pred CCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEeccCCCCceEEEecCCcEeeee
Confidence 57899999999 556788889999999999976554 22 234678889999997643 3488999999999998
Q ss_pred CCCceE-EE-----EEe------cCCccEEEEEEcC-CCCEEEEeeCCCCEEEEEC---CCCe-----EEEeecCCCCCe
Q psy4393 98 LSSGKC-LK-----TLK------GHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDV---RTGK-----CLKTLPAHSDPV 156 (247)
Q Consensus 98 ~~~~~~-~~-----~~~------~~~~~v~~~~~~~-~~~~l~~~~~d~~i~v~d~---~~~~-----~~~~~~~~~~~i 156 (247)
++.-.. .. ... .....+..+.|.+ +-..++.|+++|.|.--+- +... .......|.++|
T Consensus 322 ~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~~~~~~~~~~~~~~~~~h~g~v 401 (555)
T KOG1587|consen 322 TDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGYTPAPEVSYKGHSTFITHIGPV 401 (555)
T ss_pred ccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccCCcccccccccccccccccCcce
Confidence 764221 00 001 1123466777876 3467889999998776322 2221 123456788999
Q ss_pred EEEEECCCCCEEEEecCCCeEEEEeCC-CceeeeeeccCCCCCeEEEEECCCCC-EEEEEEcCCeEEEEECCCc
Q psy4393 157 SAVHFNRDGSLIVSSSYDGLCRIWDTA-SGQCLKTLIDDDNPPVSFVKFSPNGK-YILAATLDNTLKLWDSKVV 228 (247)
Q Consensus 157 ~~~~~~~~~~~l~~~~~dg~i~v~d~~-~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~vwd~~~~ 228 (247)
.++.++|=+..++..+.|-.+++|... ...++..+ ......+..++|||-.. .++++..||.|.+||+...
T Consensus 402 ~~v~~nPF~~k~fls~gDW~vriWs~~~~~~Pl~~~-~~~~~~v~~vaWSptrpavF~~~d~~G~l~iWDLl~~ 474 (555)
T KOG1587|consen 402 YAVSRNPFYPKNFLSVGDWTVRIWSEDVIASPLLSL-DSSPDYVTDVAWSPTRPAVFATVDGDGNLDIWDLLQD 474 (555)
T ss_pred EeeecCCCccceeeeeccceeEeccccCCCCcchhh-hhccceeeeeEEcCcCceEEEEEcCCCceehhhhhcc
Confidence 999999966544444449999999876 44433332 22334589999999765 5567778999999998654
No 225
>KOG1310|consensus
Probab=99.61 E-value=3.2e-15 Score=119.43 Aligned_cols=168 Identities=26% Similarity=0.495 Sum_probs=131.0
Q ss_pred EEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceEEEEE-ecCCccEEEEEEcC--CCCEEEEeeCCCCEEE
Q psy4393 61 FEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTL-KGHSNYVFCCNFNP--QSNLIVSGSFDESVRI 137 (247)
Q Consensus 61 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~-~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~v 137 (247)
....+.+|.+.|.++.|+.+|.+|++|++|-.+.|||.-..+.++.+ .+|...|.++.|-| ...++++|..|..|++
T Consensus 42 lE~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~l 121 (758)
T KOG1310|consen 42 LEAELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKL 121 (758)
T ss_pred hhhhhccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEE
Confidence 34568899999999999999999999999999999999877766655 57889999999988 4568899999999999
Q ss_pred EECCCC----------eEEEeecCCCCCeEEEEECCCC-CEEEEecCCCeEEEEeCCCcee-------eeeecc--CCCC
Q psy4393 138 WDVRTG----------KCLKTLPAHSDPVSAVHFNRDG-SLIVSSSYDGLCRIWDTASGQC-------LKTLID--DDNP 197 (247)
Q Consensus 138 ~d~~~~----------~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~v~d~~~~~~-------~~~~~~--~~~~ 197 (247)
||+... .....+..|...|..++-.|++ ..+-++++||.++-||++.... ...+.. ..-.
T Consensus 122 fdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~~~~l~ny~~~li 201 (758)
T KOG1310|consen 122 FDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDCPSILVNYNPQLI 201 (758)
T ss_pred EecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCccccccHHHHHhchhhh
Confidence 999742 2234455677788888888988 5778999999999999987321 111111 1112
Q ss_pred CeEEEEECCCCC-EEEEEEcCCeEEEEECCCc
Q psy4393 198 PVSFVKFSPNGK-YILAATLDNTLKLWDSKVV 228 (247)
Q Consensus 198 ~v~~~~~s~~~~-~l~~~~~dg~i~vwd~~~~ 228 (247)
...++..+|... +|+.|+.|-..++||.+..
T Consensus 202 elk~ltisp~rp~~laVGgsdpfarLYD~Rr~ 233 (758)
T KOG1310|consen 202 ELKCLTISPSRPYYLAVGGSDPFARLYDRRRV 233 (758)
T ss_pred eeeeeeecCCCCceEEecCCCchhhhhhhhhh
Confidence 346788999764 7788999999999995443
No 226
>KOG2139|consensus
Probab=99.60 E-value=3.2e-13 Score=103.03 Aligned_cols=198 Identities=15% Similarity=0.286 Sum_probs=131.7
Q ss_pred CCCeEEEEECCCC-CEEEEEeCCCeEEEEecCCCe-EE-----------EEEe-cccCCeEEEEECCCCCEEEEEcC-CC
Q psy4393 27 TKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDGK-FE-----------KTIS-GHKLGISDVAWSSDSRLLVSGSD-DK 91 (247)
Q Consensus 27 ~~~v~~~~~s~~~-~~l~~~~~dg~v~iw~~~~~~-~~-----------~~~~-~~~~~v~~~~~~~~~~~l~~~~~-d~ 91 (247)
...|++++|-|.+ +.|+.|+.. .|.+|.....- .. ..++ ....+|+++.|.+||..+++++- +.
T Consensus 140 QrnvtclawRPlsaselavgCr~-gIciW~~s~tln~~r~~~~~s~~~~qvl~~pgh~pVtsmqwn~dgt~l~tAS~gss 218 (445)
T KOG2139|consen 140 QRNVTCLAWRPLSASELAVGCRA-GICIWSDSRTLNANRNIRMMSTHHLQVLQDPGHNPVTSMQWNEDGTILVTASFGSS 218 (445)
T ss_pred hcceeEEEeccCCcceeeeeecc-eeEEEEcCcccccccccccccccchhheeCCCCceeeEEEEcCCCCEEeecccCcc
Confidence 5689999999954 567777765 48899764211 11 1111 11357999999999999998875 66
Q ss_pred eEEEEECCCceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECC-CCeEEEeecCCCCCeEEEEECCCCCEEEE
Q psy4393 92 TLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR-TGKCLKTLPAHSDPVSAVHFNRDGSLIVS 170 (247)
Q Consensus 92 ~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 170 (247)
.|.+||..++..+.......+.+.-+.|+|++.+++.+.-|+..++|+.. +.... ......+.|...+|+|+|++|+.
T Consensus 219 si~iWdpdtg~~~pL~~~glgg~slLkwSPdgd~lfaAt~davfrlw~e~q~wt~e-rw~lgsgrvqtacWspcGsfLLf 297 (445)
T KOG2139|consen 219 SIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGDVLFAATCDAVFRLWQENQSWTKE-RWILGSGRVQTACWSPCGSFLLF 297 (445)
T ss_pred eEEEEcCCCCCcccccccCCCceeeEEEcCCCCEEEEecccceeeeehhcccceec-ceeccCCceeeeeecCCCCEEEE
Confidence 89999999988766553445567788999999999999999999999544 33332 23334568999999999997654
Q ss_pred ecCCCeEEEEeCC----Cce------eeeeec---------cC----CCCCeEEEEECCCCCEEEEEEcCC--------e
Q psy4393 171 SSYDGLCRIWDTA----SGQ------CLKTLI---------DD----DNPPVSFVKFSPNGKYILAATLDN--------T 219 (247)
Q Consensus 171 ~~~dg~i~v~d~~----~~~------~~~~~~---------~~----~~~~v~~~~~s~~~~~l~~~~~dg--------~ 219 (247)
.... .-.+|.+. ... ....+. .. ......+++|+|.|.+||+.-..+ .
T Consensus 298 ~~sg-sp~lysl~f~~~~~~~~~~~~~k~~lliaDL~e~ti~ag~~l~cgeaq~lawDpsGeyLav~fKg~~~v~~~k~~ 376 (445)
T KOG2139|consen 298 ACSG-SPRLYSLTFDGEDSVFLRPQSIKRVLLIADLQEVTICAGQRLCCGEAQCLAWDPSGEYLAVIFKGQSFVLLCKLH 376 (445)
T ss_pred EEcC-CceEEEEeecCCCccccCcccceeeeeeccchhhhhhcCcccccCccceeeECCCCCEEEEEEcCCchhhhhhhh
Confidence 4322 22333321 100 001110 00 134567899999999999875433 4
Q ss_pred EEEEECCC
Q psy4393 220 LKLWDSKV 227 (247)
Q Consensus 220 i~vwd~~~ 227 (247)
|.+||.+.
T Consensus 377 i~~fdtr~ 384 (445)
T KOG2139|consen 377 ISRFDTRK 384 (445)
T ss_pred hhhhcccc
Confidence 66677554
No 227
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.59 E-value=5.5e-13 Score=109.91 Aligned_cols=179 Identities=19% Similarity=0.222 Sum_probs=117.3
Q ss_pred eEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcC---CCeEEEEECCCceEEEEEecCCccEEEEEEcCCCCEE
Q psy4393 50 LIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSD---DKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLI 126 (247)
Q Consensus 50 ~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 126 (247)
.|.++|. ++.....+..+...+.+.+|+|||+.|+..+. ...|.+||+.+++... +...........|+|+|+.+
T Consensus 177 ~L~~~D~-dG~~~~~l~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~-l~~~~g~~~~~~~SPDG~~l 254 (427)
T PRK02889 177 QLQISDA-DGQNAQSALSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRV-VANFKGSNSAPAWSPDGRTL 254 (427)
T ss_pred EEEEECC-CCCCceEeccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEE-eecCCCCccceEECCCCCEE
Confidence 5666665 34444445556667889999999999887654 2469999998886543 33333445678999999988
Q ss_pred EE-eeCCCCEEEE--ECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecC-CCeEEEE--eCCCceeeeeeccCCCCCeE
Q psy4393 127 VS-GSFDESVRIW--DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY-DGLCRIW--DTASGQCLKTLIDDDNPPVS 200 (247)
Q Consensus 127 ~~-~~~d~~i~v~--d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-dg~i~v~--d~~~~~~~~~~~~~~~~~v~ 200 (247)
+. .+.++...+| |+..+. ...+..+........|+|||+.++..+. +|...+| ++.+++...... . .....
T Consensus 255 a~~~~~~g~~~Iy~~d~~~~~-~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~~~lt~-~-g~~~~ 331 (427)
T PRK02889 255 AVALSRDGNSQIYTVNADGSG-LRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAAQRVTF-T-GSYNT 331 (427)
T ss_pred EEEEccCCCceEEEEECCCCC-cEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCceEEEec-C-CCCcC
Confidence 64 5667765555 555443 3445444555567789999998876553 4555555 545544322221 1 12233
Q ss_pred EEEECCCCCEEEEEEcCC---eEEEEECCCcceEEE
Q psy4393 201 FVKFSPNGKYILAATLDN---TLKLWDSKVVTPAII 233 (247)
Q Consensus 201 ~~~~s~~~~~l~~~~~dg---~i~vwd~~~~~~~~~ 233 (247)
..+|+|||++|+..+.++ .|.+||..+.+...+
T Consensus 332 ~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~~~l 367 (427)
T PRK02889 332 SPRISPDGKLLAYISRVGGAFKLYVQDLATGQVTAL 367 (427)
T ss_pred ceEECCCCCEEEEEEccCCcEEEEEEECCCCCeEEc
Confidence 578999999999877654 699999887765433
No 228
>PRK04792 tolB translocation protein TolB; Provisional
Probab=99.59 E-value=4e-12 Score=105.25 Aligned_cols=199 Identities=17% Similarity=0.153 Sum_probs=126.6
Q ss_pred CCCCeEEEEECCCCCEEEEEeC-CC--eEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEE-EcCCC--eEEEEECC
Q psy4393 26 HTKAVSSVKFSPNGEWLASSSA-DK--LIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVS-GSDDK--TLKIWELS 99 (247)
Q Consensus 26 h~~~v~~~~~s~~~~~l~~~~~-dg--~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d~--~i~v~d~~ 99 (247)
+...+.+..|+|||++|+..+. ++ .|.+||..+++... +...........|+|||+.|+. .+.++ .|.++|+.
T Consensus 216 ~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~-lt~~~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~ 294 (448)
T PRK04792 216 SPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREK-VTSFPGINGAPRFSPDGKKLALVLSKDGQPEIYVVDIA 294 (448)
T ss_pred CCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEE-ecCCCCCcCCeeECCCCCEEEEEEeCCCCeEEEEEECC
Confidence 4456778999999998886543 33 57888887765433 2222333457899999998765 45555 47788888
Q ss_pred CceEEEEEecCCccEEEEEEcCCCCEEEEeeC-CC--CEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCC-C
Q psy4393 100 SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF-DE--SVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD-G 175 (247)
Q Consensus 100 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~--~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-g 175 (247)
+++.. .+..+........|+|+++.++..+. ++ .|+++|+.+++... +...........|+|||++++..+.+ +
T Consensus 295 tg~~~-~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~~-Lt~~g~~~~~~~~SpDG~~l~~~~~~~g 372 (448)
T PRK04792 295 TKALT-RITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVSR-LTFEGEQNLGGSITPDGRSMIMVNRTNG 372 (448)
T ss_pred CCCeE-ECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEE-EecCCCCCcCeeECCCCCEEEEEEecCC
Confidence 76643 34444444566789999998876653 33 46777887766432 22222223446899999988776543 3
Q ss_pred --eEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcC-C--eEEEEECCCcce
Q psy4393 176 --LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD-N--TLKLWDSKVVTP 230 (247)
Q Consensus 176 --~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-g--~i~vwd~~~~~~ 230 (247)
.|.++|+.+++.. .+... . ......|+|||++|+..+.+ | .+.+++.+....
T Consensus 373 ~~~I~~~dl~~g~~~-~lt~~-~-~d~~ps~spdG~~I~~~~~~~g~~~l~~~~~~G~~~ 429 (448)
T PRK04792 373 KFNIARQDLETGAMQ-VLTST-R-LDESPSVAPNGTMVIYSTTYQGKQVLAAVSIDGRFK 429 (448)
T ss_pred ceEEEEEECCCCCeE-EccCC-C-CCCCceECCCCCEEEEEEecCCceEEEEEECCCCce
Confidence 4666788777543 22211 1 11234799999998876653 3 477777754433
No 229
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.58 E-value=7.1e-13 Score=109.53 Aligned_cols=179 Identities=17% Similarity=0.148 Sum_probs=122.7
Q ss_pred eEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcC---CCeEEEEECCCceEEEEEecCCccEEEEEEcCCCCEE
Q psy4393 50 LIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSD---DKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLI 126 (247)
Q Consensus 50 ~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 126 (247)
.|.+||... .....+..+...+...+|+|||+.|+..+. ...|.+||+.+++... +....+......|+|+|+.+
T Consensus 185 ~l~i~D~~g-~~~~~lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~-l~~~~g~~~~~~~SpDG~~l 262 (433)
T PRK04922 185 ALQVADSDG-YNPQTILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQREL-VASFRGINGAPSFSPDGRRL 262 (433)
T ss_pred EEEEECCCC-CCceEeecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEE-eccCCCCccCceECCCCCEE
Confidence 578888743 334445556667889999999999887763 3479999998876533 33333444567999999877
Q ss_pred EE-eeCCC--CEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecC-CC--eEEEEeCCCceeeeeeccCCCCCeE
Q psy4393 127 VS-GSFDE--SVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY-DG--LCRIWDTASGQCLKTLIDDDNPPVS 200 (247)
Q Consensus 127 ~~-~~~d~--~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-dg--~i~v~d~~~~~~~~~~~~~~~~~v~ 200 (247)
+. .+.++ .|++||+.+++. ..+..+........|+|||+.++.++. +| .+.++|+.+++...... . .....
T Consensus 263 ~~~~s~~g~~~Iy~~d~~~g~~-~~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~~lt~-~-g~~~~ 339 (433)
T PRK04922 263 ALTLSRDGNPEIYVMDLGSRQL-TRLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAERLTF-Q-GNYNA 339 (433)
T ss_pred EEEEeCCCCceEEEEECCCCCe-EECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCeEEeec-C-CCCcc
Confidence 64 44454 599999988764 344444445567899999998876653 44 46777777665433221 1 12234
Q ss_pred EEEECCCCCEEEEEEcCC---eEEEEECCCcceEEE
Q psy4393 201 FVKFSPNGKYILAATLDN---TLKLWDSKVVTPAII 233 (247)
Q Consensus 201 ~~~~s~~~~~l~~~~~dg---~i~vwd~~~~~~~~~ 233 (247)
..+|+|||++|+..+.++ .|.+||..++++...
T Consensus 340 ~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~~~L 375 (433)
T PRK04922 340 RASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSVRTL 375 (433)
T ss_pred CEEECCCCCEEEEEECCCCceeEEEEECCCCCeEEC
Confidence 579999999998876443 699999987766543
No 230
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=99.58 E-value=2e-11 Score=98.19 Aligned_cols=213 Identities=16% Similarity=0.281 Sum_probs=135.2
Q ss_pred EEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEc-CCCeEEEEECC
Q psy4393 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGS-DDKTLKIWELS 99 (247)
Q Consensus 21 ~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~v~d~~ 99 (247)
.++......-..+.|+|||+++++++.||.|.++|+.+.+....+.... ....+++++||++++++. ..+.+.++|.+
T Consensus 30 ~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G~-~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~ 108 (369)
T PF02239_consen 30 ARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKVGG-NPRGIAVSPDGKYVYVANYEPGTVSVIDAE 108 (369)
T ss_dssp EEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE-SS-EEEEEEE--TTTEEEEEEEETTEEEEEETT
T ss_pred EEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEecCC-CcceEEEcCCCCEEEEEecCCCceeEeccc
Confidence 3443333334557899999999999999999999999999888887533 467899999999988765 57899999988
Q ss_pred CceEEEEEec------------------CC-----------c----------------------cEEEEEEcCCCCEEEE
Q psy4393 100 SGKCLKTLKG------------------HS-----------N----------------------YVFCCNFNPQSNLIVS 128 (247)
Q Consensus 100 ~~~~~~~~~~------------------~~-----------~----------------------~v~~~~~~~~~~~l~~ 128 (247)
+.+.++.+.. +. + ......|+|++++++.
T Consensus 109 tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~~~~~~~i~~g~~~~D~~~dpdgry~~v 188 (369)
T PF02239_consen 109 TLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPKNLKVTTIKVGRFPHDGGFDPDGRYFLV 188 (369)
T ss_dssp T--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTSSCEEEEEEE--TTEEEEEE-TTSSEEEE
T ss_pred cccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEeccccccceeeecccccccccccCcccceeee
Confidence 7655543321 00 0 1123467788887655
Q ss_pred e-eCCCCEEEEECCCCeEEEee-------------------------------------------------------cCC
Q psy4393 129 G-SFDESVRIWDVRTGKCLKTL-------------------------------------------------------PAH 152 (247)
Q Consensus 129 ~-~~d~~i~v~d~~~~~~~~~~-------------------------------------------------------~~~ 152 (247)
+ ..+..+-++|..+++.+..+ ...
T Consensus 189 a~~~sn~i~viD~~~~k~v~~i~~g~~p~~~~~~~~php~~g~vw~~~~~~~~~~~~ig~~~v~v~d~~~wkvv~~I~~~ 268 (369)
T PF02239_consen 189 AANGSNKIAVIDTKTGKLVALIDTGKKPHPGPGANFPHPGFGPVWATSGLGYFAIPLIGTDPVSVHDDYAWKVVKTIPTQ 268 (369)
T ss_dssp EEGGGTEEEEEETTTTEEEEEEE-SSSBEETTEEEEEETTTEEEEEEEBSSSSEEEEEE--TTT-STTTBTSEEEEEE-S
T ss_pred cccccceeEEEeeccceEEEEeeccccccccccccccCCCcceEEeeccccceecccccCCccccchhhcCeEEEEEECC
Confidence 4 44556777777665433211 001
Q ss_pred CCCeEEEEECCCCCEEEEe----cCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEc--CCeEEEEECC
Q psy4393 153 SDPVSAVHFNRDGSLIVSS----SYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATL--DNTLKLWDSK 226 (247)
Q Consensus 153 ~~~i~~~~~~~~~~~l~~~----~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~--dg~i~vwd~~ 226 (247)
..+ .-+..+|+++++.+. ...+.|.++|..+.+....+.......+..+.|++||+++..+.. ++.|.|||.+
T Consensus 269 G~g-lFi~thP~s~~vwvd~~~~~~~~~v~viD~~tl~~~~~i~~~~~~~~~h~ef~~dG~~v~vS~~~~~~~i~v~D~~ 347 (369)
T PF02239_consen 269 GGG-LFIKTHPDSRYVWVDTFLNPDADTVQVIDKKTLKVVKTITPGPGKRVVHMEFNPDGKEVWVSVWDGNGAIVVYDAK 347 (369)
T ss_dssp SSS---EE--TT-SEEEEE-TT-SSHT-EEEEECCGTEEEE-HHHHHT--EEEEEE-TTSSEEEEEEE--TTEEEEEETT
T ss_pred CCc-ceeecCCCCccEEeeccCCCCCceEEEEECcCcceeEEEeccCCCcEeccEECCCCCEEEEEEecCCCEEEEEECC
Confidence 111 234568999999887 445799999999987766654433445788999999998876654 3479999999
Q ss_pred CcceEEEEc
Q psy4393 227 VVTPAIICS 235 (247)
Q Consensus 227 ~~~~~~~~~ 235 (247)
+.+.+..+.
T Consensus 348 Tl~~~~~i~ 356 (369)
T PF02239_consen 348 TLKEKKRIP 356 (369)
T ss_dssp TTEEEEEEE
T ss_pred CcEEEEEEE
Confidence 988776665
No 231
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.57 E-value=5.2e-12 Score=104.12 Aligned_cols=177 Identities=12% Similarity=0.121 Sum_probs=118.9
Q ss_pred eEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEc---CCCeEEEEECCCceEEEEEecCCccEEEEEEcCCCCEE
Q psy4393 50 LIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGS---DDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLI 126 (247)
Q Consensus 50 ~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 126 (247)
.|.++|...... ..+..+...+...+|+|||+.|+..+ .+..+.+|++.+++... +...........|+|+|+.+
T Consensus 180 ~l~~~d~dg~~~-~~lt~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~-l~~~~~~~~~~~~SPDG~~L 257 (429)
T PRK03629 180 ELRVSDYDGYNQ-FVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQ-VASFPRHNGAPAFSPDGSKL 257 (429)
T ss_pred eEEEEcCCCCCC-EEeecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEE-ccCCCCCcCCeEECCCCCEE
Confidence 577787754433 33444556788999999999988654 34579999998875432 22223334467899999988
Q ss_pred EEe-eCCC--CEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCC-C--eEEEEeCCCceeeeeeccCCCCCeE
Q psy4393 127 VSG-SFDE--SVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD-G--LCRIWDTASGQCLKTLIDDDNPPVS 200 (247)
Q Consensus 127 ~~~-~~d~--~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-g--~i~v~d~~~~~~~~~~~~~~~~~v~ 200 (247)
+.. ..++ .|++||+.+++.. .+..+...+....|+|||+.|+..+.+ + .|.++|+.+++... +. .......
T Consensus 258 a~~~~~~g~~~I~~~d~~tg~~~-~lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~~~-lt-~~~~~~~ 334 (429)
T PRK03629 258 AFALSKTGSLNLYVMDLASGQIR-QVTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAPQR-IT-WEGSQNQ 334 (429)
T ss_pred EEEEcCCCCcEEEEEECCCCCEE-EccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCeEE-ee-cCCCCcc
Confidence 765 3344 4889999887653 344444566788999999988766643 4 45555777665432 22 1222345
Q ss_pred EEEECCCCCEEEEEEcC---CeEEEEECCCcceE
Q psy4393 201 FVKFSPNGKYILAATLD---NTLKLWDSKVVTPA 231 (247)
Q Consensus 201 ~~~~s~~~~~l~~~~~d---g~i~vwd~~~~~~~ 231 (247)
...|+|||++|+..+.+ ..|.+||..+....
T Consensus 335 ~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~~ 368 (429)
T PRK03629 335 DADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ 368 (429)
T ss_pred CEEECCCCCEEEEEEccCCCceEEEEECCCCCeE
Confidence 68899999999887653 36888998777644
No 232
>KOG3881|consensus
Probab=99.57 E-value=2.7e-13 Score=104.18 Aligned_cols=178 Identities=15% Similarity=0.287 Sum_probs=137.4
Q ss_pred CCeEEEEECCCCCE-EEEEeCC--CeEEEEecCCCeEEEEEecc---------cCCeEEEEECCC--CCEEEEEcCCCeE
Q psy4393 28 KAVSSVKFSPNGEW-LASSSAD--KLIKIWGAYDGKFEKTISGH---------KLGISDVAWSSD--SRLLVSGSDDKTL 93 (247)
Q Consensus 28 ~~v~~~~~s~~~~~-l~~~~~d--g~v~iw~~~~~~~~~~~~~~---------~~~v~~~~~~~~--~~~l~~~~~d~~i 93 (247)
.++..+.-++.... +++|+.. ..+.+||.+..+....-+.- +.-++++.|-+. ...+++++.-+.+
T Consensus 149 ~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~qiw~aKNvpnD~L~LrVPvW~tdi~Fl~g~~~~~fat~T~~hqv 228 (412)
T KOG3881|consen 149 PGLYDVRQTDTDPYIVATGGKENINELKIWDLEQSKQIWSAKNVPNDRLGLRVPVWITDIRFLEGSPNYKFATITRYHQV 228 (412)
T ss_pred CceeeeccCCCCCceEecCchhcccceeeeecccceeeeeccCCCCccccceeeeeeccceecCCCCCceEEEEecceeE
Confidence 34555555565454 5568887 78999999877443332211 123567888886 7889999999999
Q ss_pred EEEECCCc-eEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEe-ecCCCCCeEEEEECCCCCEEEEe
Q psy4393 94 KIWELSSG-KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKT-LPAHSDPVSAVHFNRDGSLIVSS 171 (247)
Q Consensus 94 ~v~d~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~ 171 (247)
++||.+.+ +++..+......+.++...|.++++++|..-+.+..||++.+..... ++...+.++++..+|.+++++++
T Consensus 229 R~YDt~~qRRPV~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~kg~tGsirsih~hp~~~~las~ 308 (412)
T KOG3881|consen 229 RLYDTRHQRRPVAQFDFLENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKLLGCGLKGITGSIRSIHCHPTHPVLASC 308 (412)
T ss_pred EEecCcccCcceeEeccccCcceeeeecCCCcEEEEecccchhheecccCceeeccccCCccCCcceEEEcCCCceEEee
Confidence 99999876 46667776677899999999999999999999999999999987766 77888999999999999999999
Q ss_pred cCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCC
Q psy4393 172 SYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPN 207 (247)
Q Consensus 172 ~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~ 207 (247)
+.|..++|+|+.+.+.+..... ....+++.+.++
T Consensus 309 GLDRyvRIhD~ktrkll~kvYv--Ks~lt~il~~~~ 342 (412)
T KOG3881|consen 309 GLDRYVRIHDIKTRKLLHKVYV--KSRLTFILLRDD 342 (412)
T ss_pred ccceeEEEeecccchhhhhhhh--hccccEEEecCC
Confidence 9999999999998665543322 234456666544
No 233
>KOG2111|consensus
Probab=99.57 E-value=1.1e-11 Score=93.26 Aligned_cols=155 Identities=21% Similarity=0.331 Sum_probs=114.4
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCeEEEEecC-CCeEEEEEecc--cCCeEEEEECCCCCEEEE-EcCCCeEEEEECCCce
Q psy4393 27 TKAVSSVKFSPNGEWLASSSADKLIKIWGAY-DGKFEKTISGH--KLGISDVAWSSDSRLLVS-GSDDKTLKIWELSSGK 102 (247)
Q Consensus 27 ~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~-~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~-~~~d~~i~v~d~~~~~ 102 (247)
..+|.++.+.++ ++++. -.+.|+||... +.+....+... +.+.-++.-..+...|+. |-.-|.|.+-|+...+
T Consensus 94 ~~~I~~V~l~r~--riVvv-l~~~I~VytF~~n~k~l~~~et~~NPkGlC~~~~~~~k~~LafPg~k~GqvQi~dL~~~~ 170 (346)
T KOG2111|consen 94 NSEIKAVKLRRD--RIVVV-LENKIYVYTFPDNPKLLHVIETRSNPKGLCSLCPTSNKSLLAFPGFKTGQVQIVDLASTK 170 (346)
T ss_pred ccceeeEEEcCC--eEEEE-ecCeEEEEEcCCChhheeeeecccCCCceEeecCCCCceEEEcCCCccceEEEEEhhhcC
Confidence 567777777654 44444 35689999876 44544444332 223333322223333443 3346899999987544
Q ss_pred E--EEEEecCCccEEEEEEcCCCCEEEEeeCCCC-EEEEECCCCeEEEeecCC--CCCeEEEEECCCCCEEEEecCCCeE
Q psy4393 103 C--LKTLKGHSNYVFCCNFNPQSNLIVSGSFDES-VRIWDVRTGKCLKTLPAH--SDPVSAVHFNRDGSLIVSSSYDGLC 177 (247)
Q Consensus 103 ~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-i~v~d~~~~~~~~~~~~~--~~~i~~~~~~~~~~~l~~~~~dg~i 177 (247)
. ...+.+|.+.|.|++.+-+|.++||++..|+ ||+||..+|..+.+++.. ...|.+|+|+|+..+|++++..|++
T Consensus 171 ~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp~~s~LavsSdKgTl 250 (346)
T KOG2111|consen 171 PNAPSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFSPNSSWLAVSSDKGTL 250 (346)
T ss_pred cCCceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeCCCccEEEEEcCCCeE
Confidence 3 3678899999999999999999999999987 889999999999988643 3468999999999999999999999
Q ss_pred EEEeCCC
Q psy4393 178 RIWDTAS 184 (247)
Q Consensus 178 ~v~d~~~ 184 (247)
++|.++.
T Consensus 251 HiF~l~~ 257 (346)
T KOG2111|consen 251 HIFSLRD 257 (346)
T ss_pred EEEEeec
Confidence 9998765
No 234
>KOG4547|consensus
Probab=99.54 E-value=5.4e-12 Score=101.78 Aligned_cols=186 Identities=19% Similarity=0.331 Sum_probs=148.0
Q ss_pred CCCCCEEEEEeCCCeEEEEecCCCeEEEEEec---ccCCeEEEEE--------------------CCCCCEEEEEcCCCe
Q psy4393 36 SPNGEWLASSSADKLIKIWGAYDGKFEKTISG---HKLGISDVAW--------------------SSDSRLLVSGSDDKT 92 (247)
Q Consensus 36 s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~---~~~~v~~~~~--------------------~~~~~~l~~~~~d~~ 92 (247)
.|...++|....||.+++|+...++....+.. -.+..++..| +.+...++-|...|.
T Consensus 2 ~~~~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g~ 81 (541)
T KOG4547|consen 2 PPALDYFALSTGDGRLRIWDTAKNQLQQEFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQGS 81 (541)
T ss_pred CchhheEeecCCCCeEEEEEccCceeeeeeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCcc
Confidence 34567889999999999999988877665532 1333455555 123346777888999
Q ss_pred EEEEECCCceEEEEEe--cCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEE
Q psy4393 93 LKIWELSSGKCLKTLK--GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVS 170 (247)
Q Consensus 93 i~v~d~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 170 (247)
|.+|+...++....+. .|.+.|.++.++.+-..|.+++.|..+..|+......++.+......+.+++++||+..+++
T Consensus 82 v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~~sl~is~D~~~l~~ 161 (541)
T KOG4547|consen 82 VLLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPLVSSLCISPDGKILLT 161 (541)
T ss_pred EEEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCCCccceEEEcCCCCEEEe
Confidence 9999999888766664 57788999999998899999999999999999999999999888888999999999999988
Q ss_pred ecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCC-----CCEEEEE-EcCCeEEEEE
Q psy4393 171 SSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPN-----GKYILAA-TLDNTLKLWD 224 (247)
Q Consensus 171 ~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~-----~~~l~~~-~~dg~i~vwd 224 (247)
++ ++|++||+.+++.+.++ .+|.++|++++|-.+ |.+++++ ..+.-+.+|-
T Consensus 162 as--~~ik~~~~~~kevv~~f-tgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~ 218 (541)
T KOG4547|consen 162 AS--RQIKVLDIETKEVVITF-TGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVWV 218 (541)
T ss_pred cc--ceEEEEEccCceEEEEe-cCCCcceEEEEEEEeccccccceeeeccccccceeEEE
Confidence 75 67999999999877765 567789999999877 6666654 3455666664
No 235
>KOG0974|consensus
Probab=99.52 E-value=1.1e-12 Score=111.90 Aligned_cols=193 Identities=21% Similarity=0.263 Sum_probs=150.4
Q ss_pred EEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCC----eEEEEECCCCCEEEEEcCCCeEEEEECCCceEEEEE
Q psy4393 32 SVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG----ISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTL 107 (247)
Q Consensus 32 ~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~----v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~ 107 (247)
...+..+...++.++.+..+.+||...+.....+...... ..-+.++++.-++++|+--+.|.+|+....+.-..+
T Consensus 92 g~~l~~e~k~i~l~~~~ns~~i~d~~~~~~~~~i~~~er~~l~~~~~~g~s~~~~~i~~gsv~~~iivW~~~~dn~p~~l 171 (967)
T KOG0974|consen 92 GAKLFEENKKIALVTSRNSLLIRDSKNSSVLSKIQSDERCTLYSSLIIGDSAEELYIASGSVFGEIIVWKPHEDNKPIRL 171 (967)
T ss_pred ccchhhhcceEEEEEcCceEEEEecccCceehhcCCCceEEEEeEEEEeccCcEEEEEeccccccEEEEeccccCCccee
Confidence 3444455667788888889999998766555444332211 122345667778899999999999998733222257
Q ss_pred ecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEE-eecCCCCCeEEEEECCCCCEEEEecCCCeEEEEeCCCce
Q psy4393 108 KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLK-TLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 186 (247)
Q Consensus 108 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~-~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~ 186 (247)
.+|.+.+..+.++-+|.++++.+.|+.+++|++.+.+... ..-.|...+..+++.|+ .+++++.|.+.++|+... +
T Consensus 172 ~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n--~i~t~gedctcrvW~~~~-~ 248 (967)
T KOG0974|consen 172 KGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWACCFLPN--RIITVGEDCTCRVWGVNG-T 248 (967)
T ss_pred cccCCceEEEEEccCCcEEEEEecCcceeeeecccccccCcccccccceeEEEEeccc--eeEEeccceEEEEEeccc-c
Confidence 8999999999999999999999999999999999887655 55578899999999998 899999999999996543 3
Q ss_pred eeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCC
Q psy4393 187 CLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKV 227 (247)
Q Consensus 187 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~ 227 (247)
.+..+..+....+..++.+++...+++++.|+.+++||...
T Consensus 249 ~l~~y~~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l~~ 289 (967)
T KOG0974|consen 249 QLEVYDEHSGKGIWKIAVPIGVIIKVTGGNDSTLKLWDLNG 289 (967)
T ss_pred eehhhhhhhhcceeEEEEcCCceEEEeeccCcchhhhhhhc
Confidence 34455555567788999999999999999999999999754
No 236
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.51 E-value=3e-11 Score=99.65 Aligned_cols=178 Identities=17% Similarity=0.194 Sum_probs=120.8
Q ss_pred eEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCC---CeEEEEECCCceEEEEEecCCccEEEEEEcCCCCEE
Q psy4393 50 LIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDD---KTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLI 126 (247)
Q Consensus 50 ~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 126 (247)
.|.++|... .....+..+...+....|+|||+.++.+... ..|++||+.+++... +......+..+.|+|+++.+
T Consensus 171 ~l~~~d~~g-~~~~~l~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~-~~~~~~~~~~~~~spDg~~l 248 (417)
T TIGR02800 171 ELQVADYDG-ANPQTITRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREK-VASFPGMNGAPAFSPDGSKL 248 (417)
T ss_pred eEEEEcCCC-CCCEEeecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEE-eecCCCCccceEECCCCCEE
Confidence 567777643 3334455555568889999999999877543 479999998876433 33344455678999999877
Q ss_pred EEe-eCCC--CEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecC-CC--eEEEEeCCCceeeeeeccCCCCCeE
Q psy4393 127 VSG-SFDE--SVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY-DG--LCRIWDTASGQCLKTLIDDDNPPVS 200 (247)
Q Consensus 127 ~~~-~~d~--~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-dg--~i~v~d~~~~~~~~~~~~~~~~~v~ 200 (247)
+.. +.++ .|++||+.++.. ..+..+........|+|+++.|+..+. .+ .|.++|+.+++... +.. ......
T Consensus 249 ~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~~~-l~~-~~~~~~ 325 (417)
T TIGR02800 249 AVSLSKDGNPDIYVMDLDGKQL-TRLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEVRR-LTF-RGGYNA 325 (417)
T ss_pred EEEECCCCCccEEEEECCCCCE-EECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCEEE-eec-CCCCcc
Confidence 643 4443 588999987654 333344444456789999998876554 33 67888887765432 221 223345
Q ss_pred EEEECCCCCEEEEEEcCC---eEEEEECCCcceEE
Q psy4393 201 FVKFSPNGKYILAATLDN---TLKLWDSKVVTPAI 232 (247)
Q Consensus 201 ~~~~s~~~~~l~~~~~dg---~i~vwd~~~~~~~~ 232 (247)
...|+|+|++|+.++.++ .|.+||..+.....
T Consensus 326 ~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~~~~ 360 (417)
T TIGR02800 326 SPSWSPDGDLIAFVHREGGGFNIAVMDLDGGGERV 360 (417)
T ss_pred CeEECCCCCEEEEEEccCCceEEEEEeCCCCCeEE
Confidence 678999999999988776 89999987755443
No 237
>KOG4227|consensus
Probab=99.50 E-value=9.4e-13 Score=101.67 Aligned_cols=167 Identities=18% Similarity=0.305 Sum_probs=132.4
Q ss_pred EEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCC------ceEEEEEe-cCCccEEEEEEcCCCCEEEEeeCCCC
Q psy4393 62 EKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSS------GKCLKTLK-GHSNYVFCCNFNPQSNLIVSGSFDES 134 (247)
Q Consensus 62 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~------~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~ 134 (247)
++.+.+|.+.|.++.|+.++++|++|+.|..+++|.+.. .+++.... .|.+.|.|++|+-...++++|+.++.
T Consensus 49 qKD~~~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~ 128 (609)
T KOG4227|consen 49 QKDVREHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGT 128 (609)
T ss_pred hhhhhhhccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCcce
Confidence 345678889999999999999999999999999999853 23333332 24478999999999999999999999
Q ss_pred EEEEECCCCeEEEeecC--CCCCeEEEEECCCCCEEEEecCCCeEEEEeCCCceeeeee-c-cCCCCCeEEEEECCCCC-
Q psy4393 135 VRIWDVRTGKCLKTLPA--HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL-I-DDDNPPVSFVKFSPNGK- 209 (247)
Q Consensus 135 i~v~d~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~-~-~~~~~~v~~~~~s~~~~- 209 (247)
|.+.|+.+.+.+..+.. ..+.|..|..+|....|++.+.++.|.+||.+..+....+ . .........+-|+|-..
T Consensus 129 VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t~~F~P~~P~ 208 (609)
T KOG4227|consen 129 VIKHDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVLPANSGKNFYTAEFHPETPA 208 (609)
T ss_pred eEeeecccceeeeeecccCcccceeecccCCCCceEEEEecCceEEEEeccCCCCCCceeeecCCCccceeeeecCCCce
Confidence 99999999988777642 2358999999999999999999999999999876522222 1 12234566788999764
Q ss_pred EEEEEEcCCeEEEEECCCc
Q psy4393 210 YILAATLDNTLKLWDSKVV 228 (247)
Q Consensus 210 ~l~~~~~dg~i~vwd~~~~ 228 (247)
+|++.+..+-+-+||.+..
T Consensus 209 Li~~~~~~~G~~~~D~R~~ 227 (609)
T KOG4227|consen 209 LILVNSETGGPNVFDRRMQ 227 (609)
T ss_pred eEEeccccCCCCceeeccc
Confidence 6677788899999998754
No 238
>PRK04043 tolB translocation protein TolB; Provisional
Probab=99.48 E-value=3e-10 Score=93.05 Aligned_cols=198 Identities=15% Similarity=0.081 Sum_probs=127.4
Q ss_pred CeEEEEECCCCCE-EEEEeC---CCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEE-cC--CCeEEEEECCCc
Q psy4393 29 AVSSVKFSPNGEW-LASSSA---DKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSG-SD--DKTLKIWELSSG 101 (247)
Q Consensus 29 ~v~~~~~s~~~~~-l~~~~~---dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~--d~~i~v~d~~~~ 101 (247)
......|+|||+. ++..+. +..|.++|..+++...... .........|+|||+.++.. +. +..|.++|+.++
T Consensus 189 ~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~-~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g 267 (419)
T PRK04043 189 LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIAS-SQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTK 267 (419)
T ss_pred CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEec-CCCcEEeeEECCCCCEEEEEEccCCCcEEEEEECCCC
Confidence 6778999999985 554333 3468888887776544433 44456678899999877543 33 357888898777
Q ss_pred eEEEEEecCCccEEEEEEcCCCCEEEEeeCC-C--CEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCC----
Q psy4393 102 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD-E--SVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD---- 174 (247)
Q Consensus 102 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~--~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d---- 174 (247)
+.. .+...........|+|+|+.++..+.. + .|.++|+.+++..+.... ... ...|+|+|+.++.....
T Consensus 268 ~~~-~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~rlt~~-g~~--~~~~SPDG~~Ia~~~~~~~~~ 343 (419)
T PRK04043 268 TLT-QITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQVVFH-GKN--NSSVSTYKNYIVYSSRETNNE 343 (419)
T ss_pred cEE-EcccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeEeCccC-CCc--CceECCCCCEEEEEEcCCCcc
Confidence 643 344333323345799999988776542 3 588888887765333221 111 24899999988766543
Q ss_pred -----CeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCC---eEEEEECCCcceEEEE
Q psy4393 175 -----GLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN---TLKLWDSKVVTPAIIC 234 (247)
Q Consensus 175 -----g~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg---~i~vwd~~~~~~~~~~ 234 (247)
..|.+.|+.+++.. .+... .......|+|||+.|+..+.++ .+.+.+++........
T Consensus 344 ~~~~~~~I~v~d~~~g~~~-~LT~~--~~~~~p~~SPDG~~I~f~~~~~~~~~L~~~~l~g~~~~~l~ 408 (419)
T PRK04043 344 FGKNTFNLYLISTNSDYIR-RLTAN--GVNQFPRFSSDGGSIMFIKYLGNQSALGIIRLNYNKSFLFP 408 (419)
T ss_pred cCCCCcEEEEEECCCCCeE-ECCCC--CCcCCeEECCCCCEEEEEEccCCcEEEEEEecCCCeeEEee
Confidence 36888898877643 33222 1223578999999888776432 4777777665554443
No 239
>KOG0644|consensus
Probab=99.47 E-value=3.4e-14 Score=118.59 Aligned_cols=115 Identities=31% Similarity=0.672 Sum_probs=108.1
Q ss_pred EecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCe
Q psy4393 65 ISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK 144 (247)
Q Consensus 65 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~ 144 (247)
+.+|...|.|..|...|.+++++++|..++||.+.++.++...++|.+.+..++.+....++++++.|..|++|-++.+.
T Consensus 186 LlgH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~~~~ 265 (1113)
T KOG0644|consen 186 LLGHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLPDGA 265 (1113)
T ss_pred HHhhhhheeeeeeccccceEeecCccceeeeeeccchhhhccCCCCccccchhccchhhhhhhhcccCceEEEEecCCCc
Confidence 45788899999999999999999999999999999999999999999999999999998999999999999999999999
Q ss_pred EEEeecCCCCCeEEEEECCCCCEEEEecCCCeEEEEeCC
Q psy4393 145 CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA 183 (247)
Q Consensus 145 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~ 183 (247)
++..+..|.+.|++++|+|-. +.+.||++++||.+
T Consensus 266 pvsvLrghtgavtaiafsP~~----sss~dgt~~~wd~r 300 (1113)
T KOG0644|consen 266 PVSVLRGHTGAVTAIAFSPRA----SSSDDGTCRIWDAR 300 (1113)
T ss_pred hHHHHhccccceeeeccCccc----cCCCCCceEecccc
Confidence 999999999999999999943 67789999999987
No 240
>KOG2321|consensus
Probab=99.47 E-value=5e-12 Score=101.88 Aligned_cols=196 Identities=17% Similarity=0.283 Sum_probs=147.1
Q ss_pred EEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceEEEEEec--
Q psy4393 32 SVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKG-- 109 (247)
Q Consensus 32 ~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~-- 109 (247)
.++++.-..-|+.++....|+-++++.|..+..+.....+++.+..++...+|++|+.+|.+..||.++...+..+..
T Consensus 138 Dm~y~~~scDly~~gsg~evYRlNLEqGrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ksrv~~l~~~~ 217 (703)
T KOG2321|consen 138 DMKYHKPSCDLYLVGSGSEVYRLNLEQGRFLNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWDPRDKSRVGTLDAAS 217 (703)
T ss_pred cccccCCCccEEEeecCcceEEEEccccccccccccccccceeeeecCccceEEecccCceEEEecchhhhhheeeeccc
Confidence 344443333344455556778888889998888888788899999999999999999999999999988665554432
Q ss_pred ----CC-----ccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEee-cCCCCCeEEEEECCC--CCEEEEecCCCeE
Q psy4393 110 ----HS-----NYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTL-PAHSDPVSAVHFNRD--GSLIVSSSYDGLC 177 (247)
Q Consensus 110 ----~~-----~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~-~~~~~~i~~~~~~~~--~~~l~~~~~dg~i 177 (247)
+. ..|.++.|+.+|-.++.|..+|.+.+||++..+++..- ....-+|..+.|.+. +..+++. ....+
T Consensus 218 ~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~kdh~~e~pi~~l~~~~~~~q~~v~S~-Dk~~~ 296 (703)
T KOG2321|consen 218 SVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVKDHGYELPIKKLDWQDTDQQNKVVSM-DKRIL 296 (703)
T ss_pred ccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeecccCCccceeeecccccCCCceEEec-chHHh
Confidence 22 23889999999999999999999999999998876542 233457888999775 3344443 45678
Q ss_pred EEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcce
Q psy4393 178 RIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTP 230 (247)
Q Consensus 178 ~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~ 230 (247)
++||-.+++....... ...++.+++-|++-++.++-.++.+..|=.....|
T Consensus 297 kiWd~~~Gk~~asiEp--t~~lND~C~~p~sGm~f~Ane~~~m~~yyiP~LGP 347 (703)
T KOG2321|consen 297 KIWDECTGKPMASIEP--TSDLNDFCFVPGSGMFFTANESSKMHTYYIPSLGP 347 (703)
T ss_pred hhcccccCCceeeccc--cCCcCceeeecCCceEEEecCCCcceeEEccccCC
Confidence 9999999987765533 34578889999999999998888777775544443
No 241
>KOG1064|consensus
Probab=99.46 E-value=6.2e-13 Score=118.91 Aligned_cols=193 Identities=13% Similarity=0.237 Sum_probs=147.4
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEe-cccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceE
Q psy4393 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS-GHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKC 103 (247)
Q Consensus 25 ~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~ 103 (247)
.+...|.++.=+|...+.++|+.||.+++|.--.+..+..+. .....|+.+.|+.+|+.+..+..||.+.+|... .+.
T Consensus 2206 ~~v~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~-pk~ 2284 (2439)
T KOG1064|consen 2206 HPVENVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQVVCFRTAGNSRVTRSRFNHQGNKFGIVDGDGDLSLWQAS-PKP 2284 (2439)
T ss_pred cccCceeeecCCCCCceEEecCCCceEEEEeccCCCeEEEeeccCcchhhhhhhcccCCceeeeccCCceeecccC-Ccc
Confidence 456778888889999999999999999999866555444433 223679999999999999999999999999987 344
Q ss_pred EEEEecCCccEEEEEEcCCCCEEEEee---CCCCEEEEECCCCe-EEEeecCCCCCeEEEEECCCCCEEEEecCCCeEEE
Q psy4393 104 LKTLKGHSNYVFCCNFNPQSNLIVSGS---FDESVRIWDVRTGK-CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 179 (247)
Q Consensus 104 ~~~~~~~~~~v~~~~~~~~~~~l~~~~---~d~~i~v~d~~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v 179 (247)
....+.|........|-. ..+++++ .++.+.+||..-.. .-..-..|.+.++++++-|...+|++|+.+|.+++
T Consensus 2285 ~~s~qchnk~~~Df~Fi~--s~~~tag~s~d~~n~~lwDtl~~~~~s~v~~~H~~gaT~l~~~P~~qllisggr~G~v~l 2362 (2439)
T KOG1064|consen 2285 YTSWQCHNKALSDFRFIG--SLLATAGRSSDNRNVCLWDTLLPPMNSLVHTCHDGGATVLAYAPKHQLLISGGRKGEVCL 2362 (2439)
T ss_pred eeccccCCccccceeeee--hhhhccccCCCCCcccchhcccCcccceeeeecCCCceEEEEcCcceEEEecCCcCcEEE
Confidence 445556665555555553 5566553 46789999975322 11122789999999999999999999999999999
Q ss_pred EeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcceE
Q psy4393 180 WDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPA 231 (247)
Q Consensus 180 ~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~ 231 (247)
||++..+..+++.. ++ ...++++|+..|.++||++..-..+
T Consensus 2363 ~D~rqrql~h~~~~----------~~-~~~~f~~~ss~g~ikIw~~s~~~ll 2403 (2439)
T KOG1064|consen 2363 FDIRQRQLRHTFQA----------LD-TREYFVTGSSEGNIKIWRLSEFGLL 2403 (2439)
T ss_pred eehHHHHHHHHhhh----------hh-hhheeeccCcccceEEEEccccchh
Confidence 99998776655422 44 5678999999999999998875443
No 242
>PRK00178 tolB translocation protein TolB; Provisional
Probab=99.45 E-value=1.7e-10 Score=95.53 Aligned_cols=179 Identities=13% Similarity=0.144 Sum_probs=118.4
Q ss_pred eEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCC---CeEEEEECCCceEEEEEecCCccEEEEEEcCCCCEE
Q psy4393 50 LIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDD---KTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLI 126 (247)
Q Consensus 50 ~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 126 (247)
.|.++|..... ...+..+...+....|+|||+.|+..+.+ ..|.+||+.+++... +....+......|+|+|+.+
T Consensus 180 ~l~~~d~~g~~-~~~l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~-l~~~~g~~~~~~~SpDG~~l 257 (430)
T PRK00178 180 TLQRSDYDGAR-AVTLLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQ-ITNFEGLNGAPAWSPDGSKL 257 (430)
T ss_pred EEEEECCCCCC-ceEEecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEE-ccCCCCCcCCeEECCCCCEE
Confidence 36666665433 34454556678899999999998776543 468999998876533 33333344567899999988
Q ss_pred EE-eeCCC--CEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecC-CC--eEEEEeCCCceeeeeeccCCCCCeE
Q psy4393 127 VS-GSFDE--SVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY-DG--LCRIWDTASGQCLKTLIDDDNPPVS 200 (247)
Q Consensus 127 ~~-~~~d~--~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-dg--~i~v~d~~~~~~~~~~~~~~~~~v~ 200 (247)
+. ...++ .|+++|+.+++. ..+..+........|+|||+.++..+. +| .|.++|+.+++....... .....
T Consensus 258 a~~~~~~g~~~Iy~~d~~~~~~-~~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~~lt~~--~~~~~ 334 (430)
T PRK00178 258 AFVLSKDGNPEIYVMDLASRQL-SRVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAERVTFV--GNYNA 334 (430)
T ss_pred EEEEccCCCceEEEEECCCCCe-EEcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeecC--CCCcc
Confidence 74 34444 588889988764 334444445566789999998766553 33 577778877764332211 12223
Q ss_pred EEEECCCCCEEEEEEcC-C--eEEEEECCCcceEEE
Q psy4393 201 FVKFSPNGKYILAATLD-N--TLKLWDSKVVTPAII 233 (247)
Q Consensus 201 ~~~~s~~~~~l~~~~~d-g--~i~vwd~~~~~~~~~ 233 (247)
...|+|||++|+..+.+ + .|.+||..++....+
T Consensus 335 ~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~~~~l 370 (430)
T PRK00178 335 RPRLSADGKTLVMVHRQDGNFHVAAQDLQRGSVRIL 370 (430)
T ss_pred ceEECCCCCEEEEEEccCCceEEEEEECCCCCEEEc
Confidence 46899999999887753 3 588899887665443
No 243
>KOG1354|consensus
Probab=99.45 E-value=8.4e-12 Score=94.88 Aligned_cols=209 Identities=22% Similarity=0.404 Sum_probs=141.6
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCe-----EEEEEecc------------cCCeEEEEECCCCC--EEEEE
Q psy4393 27 TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-----FEKTISGH------------KLGISDVAWSSDSR--LLVSG 87 (247)
Q Consensus 27 ~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~-----~~~~~~~~------------~~~v~~~~~~~~~~--~l~~~ 87 (247)
..-|.++.|...|++||+|..+|.|.++.-.... ....+..| ...|..+.|.++++ .++..
T Consensus 25 adiis~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FLls 104 (433)
T KOG1354|consen 25 ADIISAVEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFLLS 104 (433)
T ss_pred hcceeeEEeecccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEEEe
Confidence 4568899999999999999999999998654322 12222222 23577889998765 46777
Q ss_pred cCCCeEEEEECCCceE--------------------EEEE----------------ecCCccEEEEEEcCCCCEEEEeeC
Q psy4393 88 SDDKTLKIWELSSGKC--------------------LKTL----------------KGHSNYVFCCNFNPQSNLIVSGSF 131 (247)
Q Consensus 88 ~~d~~i~v~d~~~~~~--------------------~~~~----------------~~~~~~v~~~~~~~~~~~l~~~~~ 131 (247)
+.|.+|++|.+..... +..+ .+|.-.|.++.++.|+..++++ .
T Consensus 105 tNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~Et~lSA-D 183 (433)
T KOG1354|consen 105 TNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKETFLSA-D 183 (433)
T ss_pred cCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccceEeec-c
Confidence 7899999998753211 0011 1355567888899998888775 4
Q ss_pred CCCEEEEECCCCe-E--EEeecCCC-----CCeEEEEECCC-CCEEEEecCCCeEEEEeCCCcee------e--------
Q psy4393 132 DESVRIWDVRTGK-C--LKTLPAHS-----DPVSAVHFNRD-GSLIVSSSYDGLCRIWDTASGQC------L-------- 188 (247)
Q Consensus 132 d~~i~v~d~~~~~-~--~~~~~~~~-----~~i~~~~~~~~-~~~l~~~~~dg~i~v~d~~~~~~------~-------- 188 (247)
|=.|.+|++.... . +..++.+. .-|++..|+|. ...++-.+..|.|++-|++.... +
T Consensus 184 dLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsKlfEepedp~ 263 (433)
T KOG1354|consen 184 DLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHSKLFEEPEDPS 263 (433)
T ss_pred ceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcchhhhhccccCCc
Confidence 6679999986432 1 22233321 35788889995 45677778899999999984321 0
Q ss_pred -eeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECC-CcceEEEEccC
Q psy4393 189 -KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSK-VVTPAIICSTP 237 (247)
Q Consensus 189 -~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~-~~~~~~~~~~~ 237 (247)
+.++..-...|..+.|+++|+|+++=+ --+|++||.+ ...|+.+++.+
T Consensus 264 ~rsffseiIsSISDvKFs~sGryilsRD-yltvk~wD~nme~~pv~t~~vh 313 (433)
T KOG1354|consen 264 SRSFFSEIISSISDVKFSHSGRYILSRD-YLTVKLWDLNMEAKPVETYPVH 313 (433)
T ss_pred chhhHHHHhhhhhceEEccCCcEEEEec-cceeEEEeccccCCcceEEeeh
Confidence 011111224578899999999998764 2699999994 56787777654
No 244
>KOG4497|consensus
Probab=99.44 E-value=1.6e-10 Score=87.60 Aligned_cols=202 Identities=17% Similarity=0.273 Sum_probs=132.7
Q ss_pred ecCCCCeEEEEECCCCCEEE-EEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCC------------
Q psy4393 24 AGHTKAVSSVKFSPNGEWLA-SSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDD------------ 90 (247)
Q Consensus 24 ~~h~~~v~~~~~s~~~~~l~-~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------------ 90 (247)
..-..++.+++|||||+.++ +..-+-.|.+|.+.+.+.. -+.-....+..++|+|||++.+.++.-
T Consensus 88 deg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~-~~~~pK~~~kg~~f~~dg~f~ai~sRrDCkdyv~i~~c~ 166 (447)
T KOG4497|consen 88 DEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGY-LLPHPKTNVKGYAFHPDGQFCAILSRRDCKDYVQISSCK 166 (447)
T ss_pred ccCCCcceeeeECCCcceEeeeecceeEEEEEEeccceeE-EecccccCceeEEECCCCceeeeeecccHHHHHHHHhhH
Confidence 34467899999999997665 5556778999998665432 223334456788899999887665421
Q ss_pred ------------------------CeEEEEECCCceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEE
Q psy4393 91 ------------------------KTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCL 146 (247)
Q Consensus 91 ------------------------~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~ 146 (247)
..+.+||.--.-.+... .-.-.+..++|+|-+++++.|+.|+.+++.+--+.+..
T Consensus 167 ~W~ll~~f~~dT~DltgieWsPdg~~laVwd~~Leykv~aY-e~~lG~k~v~wsP~~qflavGsyD~~lrvlnh~tWk~f 245 (447)
T KOG4497|consen 167 AWILLKEFKLDTIDLTGIEWSPDGNWLAVWDNVLEYKVYAY-ERGLGLKFVEWSPCNQFLAVGSYDQMLRVLNHFTWKPF 245 (447)
T ss_pred HHHHHHhcCCCcccccCceECCCCcEEEEecchhhheeeee-eeccceeEEEeccccceEEeeccchhhhhhceeeeeeh
Confidence 12334442111111111 11123667899999999999999998887653221110
Q ss_pred ------------------------------------------------------------Eeec------CCCCCeEEEE
Q psy4393 147 ------------------------------------------------------------KTLP------AHSDPVSAVH 160 (247)
Q Consensus 147 ------------------------------------------------------------~~~~------~~~~~i~~~~ 160 (247)
..++ .....+.-++
T Consensus 246 ~eflhl~s~~dp~~~~~~ke~~~~~ql~~~cLsf~p~~~~a~~~~~se~~YE~~~~pv~~~~lkp~tD~pnPk~g~g~la 325 (447)
T KOG4497|consen 246 GEFLHLCSYHDPTLHLLEKETFSIVQLLHHCLSFTPTDLEAHIWEESETIYEQQMTPVKVHKLKPPTDFPNPKCGAGKLA 325 (447)
T ss_pred hhhccchhccCchhhhhhhhhcchhhhcccccccCCCccccCccccchhhhhhhhcceeeecccCCCCCCCcccccceee
Confidence 0000 0011355689
Q ss_pred ECCCCCEEEEecC--CCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcc
Q psy4393 161 FNRDGSLIVSSSY--DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVT 229 (247)
Q Consensus 161 ~~~~~~~l~~~~~--dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~ 229 (247)
|++|..++++-.. -..+.+||+...+....+.. ..+|....|+|....|+.++...++.+|......
T Consensus 326 fs~Ds~y~aTrnd~~PnalW~Wdlq~l~l~avLiQ--k~piraf~WdP~~prL~vctg~srLY~W~psg~~ 394 (447)
T KOG4497|consen 326 FSCDSTYAATRNDKYPNALWLWDLQNLKLHAVLIQ--KHPIRAFEWDPGRPRLVVCTGKSRLYFWAPSGPR 394 (447)
T ss_pred ecCCceEEeeecCCCCceEEEEechhhhhhhhhhh--ccceeEEEeCCCCceEEEEcCCceEEEEcCCCce
Confidence 9999998887653 25799999998775554443 3478999999999999999888899999876533
No 245
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=99.43 E-value=3.7e-09 Score=84.95 Aligned_cols=200 Identities=16% Similarity=0.306 Sum_probs=130.0
Q ss_pred CCCeEEEEECCCCCEEEEEe-CCCeEEEEecCC-CeEEEE---Ee----------cccCCeEEEEECCCCCEEEEEcC-C
Q psy4393 27 TKAVSSVKFSPNGEWLASSS-ADKLIKIWGAYD-GKFEKT---IS----------GHKLGISDVAWSSDSRLLVSGSD-D 90 (247)
Q Consensus 27 ~~~v~~~~~s~~~~~l~~~~-~dg~v~iw~~~~-~~~~~~---~~----------~~~~~v~~~~~~~~~~~l~~~~~-d 90 (247)
......++++|++++|+++. .+|.+.++++.. +..... +. .......++.++|+++++++... .
T Consensus 86 g~~p~~i~~~~~g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~ 165 (345)
T PF10282_consen 86 GSSPCHIAVDPDGRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGA 165 (345)
T ss_dssp SSCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTT
T ss_pred CCCcEEEEEecCCCEEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCC
Confidence 34456789999999998876 478999999875 443332 11 11244788999999998876543 4
Q ss_pred CeEEEEECCCce--EE--EEEe-cCCccEEEEEEcCCCCEEEEeeC-CCCEEEEECC--CCeE--EEeecCC------CC
Q psy4393 91 KTLKIWELSSGK--CL--KTLK-GHSNYVFCCNFNPQSNLIVSGSF-DESVRIWDVR--TGKC--LKTLPAH------SD 154 (247)
Q Consensus 91 ~~i~v~d~~~~~--~~--~~~~-~~~~~v~~~~~~~~~~~l~~~~~-d~~i~v~d~~--~~~~--~~~~~~~------~~ 154 (247)
..|.+|++.... .. ..+. .....-+.+.|+|++++++...+ ++.|.++++. .+.. +..+... ..
T Consensus 166 D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~ 245 (345)
T PF10282_consen 166 DRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGEN 245 (345)
T ss_dssp TEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSS
T ss_pred CEEEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccccccccC
Confidence 579999987654 21 2222 22334678999999998877654 6679999887 4432 2222211 12
Q ss_pred CeEEEEECCCCCEEEEec-CCCeEEEEeCC--Ccee--eeeeccCCCCCeEEEEECCCCCEEEEEEc-CCeEEEEECCC
Q psy4393 155 PVSAVHFNRDGSLIVSSS-YDGLCRIWDTA--SGQC--LKTLIDDDNPPVSFVKFSPNGKYILAATL-DNTLKLWDSKV 227 (247)
Q Consensus 155 ~i~~~~~~~~~~~l~~~~-~dg~i~v~d~~--~~~~--~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-dg~i~vwd~~~ 227 (247)
....++++|||++|+++. ..+.|.+|++. +++. +...... ...-..++++|+|++|+++.. ++.|.+|+.+.
T Consensus 246 ~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~~-G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~d~ 323 (345)
T PF10282_consen 246 APAEIAISPDGRFLYVSNRGSNSISVFDLDPATGTLTLVQTVPTG-GKFPRHFAFSPDGRYLYVANQDSNTVSVFDIDP 323 (345)
T ss_dssp SEEEEEE-TTSSEEEEEECTTTEEEEEEECTTTTTEEEEEEEEES-SSSEEEEEE-TTSSEEEEEETTTTEEEEEEEET
T ss_pred CceeEEEecCCCEEEEEeccCCEEEEEEEecCCCceEEEEEEeCC-CCCccEEEEeCCCCEEEEEecCCCeEEEEEEeC
Confidence 567899999999988765 45689999983 2332 2222222 223477999999999998875 57999997653
No 246
>PRK04792 tolB translocation protein TolB; Provisional
Probab=99.42 E-value=2.5e-10 Score=94.63 Aligned_cols=178 Identities=15% Similarity=0.141 Sum_probs=114.9
Q ss_pred eEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCC---CeEEEEECCCceEEEEEecCCccEEEEEEcCCCCEE
Q psy4393 50 LIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDD---KTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLI 126 (247)
Q Consensus 50 ~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 126 (247)
.+.++|..... ...+......+....|+|||+.|+..+.+ ..|.++|+.+++... +...........|+|+++.+
T Consensus 199 ~l~i~d~dG~~-~~~l~~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~-lt~~~g~~~~~~wSPDG~~L 276 (448)
T PRK04792 199 QLMIADYDGYN-EQMLLRSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREK-VTSFPGINGAPRFSPDGKKL 276 (448)
T ss_pred EEEEEeCCCCC-ceEeecCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEE-ecCCCCCcCCeeECCCCCEE
Confidence 56666654433 34444556678889999999998876432 368889998776432 32222333467899999987
Q ss_pred EE-eeCCCC--EEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecC-CC--eEEEEeCCCceeeeeeccCCCCCeE
Q psy4393 127 VS-GSFDES--VRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY-DG--LCRIWDTASGQCLKTLIDDDNPPVS 200 (247)
Q Consensus 127 ~~-~~~d~~--i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-dg--~i~v~d~~~~~~~~~~~~~~~~~v~ 200 (247)
+. ...++. |+++|+.+++. ..+..+........|+|||+.++..+. ++ .+.++|+.+++........ ....
T Consensus 277 a~~~~~~g~~~Iy~~dl~tg~~-~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~~Lt~~g--~~~~ 353 (448)
T PRK04792 277 ALVLSKDGQPEIYVVDIATKAL-TRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVSRLTFEG--EQNL 353 (448)
T ss_pred EEEEeCCCCeEEEEEECCCCCe-EECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEEecCC--CCCc
Confidence 65 455564 77889887754 344444445567899999998776543 33 5777788777643322111 1123
Q ss_pred EEEECCCCCEEEEEEcC-C--eEEEEECCCcceEE
Q psy4393 201 FVKFSPNGKYILAATLD-N--TLKLWDSKVVTPAI 232 (247)
Q Consensus 201 ~~~~s~~~~~l~~~~~d-g--~i~vwd~~~~~~~~ 232 (247)
..+|+|||++|+..+.+ + .|.++|..++.+..
T Consensus 354 ~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~~~~ 388 (448)
T PRK04792 354 GGSITPDGRSMIMVNRTNGKFNIARQDLETGAMQV 388 (448)
T ss_pred CeeECCCCCEEEEEEecCCceEEEEEECCCCCeEE
Confidence 46899999999887653 4 56667877765543
No 247
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=99.42 E-value=3.5e-09 Score=83.84 Aligned_cols=198 Identities=12% Similarity=0.135 Sum_probs=136.0
Q ss_pred EECCCCCEEEEEeC----------CCeEEEEecCCCeEEEEEecccC-------CeEEEEECCCCCEEEEEc-C-CCeEE
Q psy4393 34 KFSPNGEWLASSSA----------DKLIKIWGAYDGKFEKTISGHKL-------GISDVAWSSDSRLLVSGS-D-DKTLK 94 (247)
Q Consensus 34 ~~s~~~~~l~~~~~----------dg~v~iw~~~~~~~~~~~~~~~~-------~v~~~~~~~~~~~l~~~~-~-d~~i~ 94 (247)
.++|||+.|+.+.. ++.|.+||..+.+....+..... ....++++|||++++... . +..+.
T Consensus 52 ~~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~ 131 (352)
T TIGR02658 52 VVASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVG 131 (352)
T ss_pred eECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhccCccceEEECCCCCEEEEecCCCCCEEE
Confidence 39999998876654 78999999999988877753211 233688999999988765 3 68899
Q ss_pred EEECCCceEEEEEecCC------------------c-------------cEEEEE--------------EcC-CCCEEEE
Q psy4393 95 IWELSSGKCLKTLKGHS------------------N-------------YVFCCN--------------FNP-QSNLIVS 128 (247)
Q Consensus 95 v~d~~~~~~~~~~~~~~------------------~-------------~v~~~~--------------~~~-~~~~l~~ 128 (247)
+.|+.+++.+..+.... + ...... +.+ ++..+..
T Consensus 132 VvD~~~~kvv~ei~vp~~~~vy~t~e~~~~~~~~Dg~~~~v~~d~~g~~~~~~~~vf~~~~~~v~~rP~~~~~dg~~~~v 211 (352)
T TIGR02658 132 VVDLEGKAFVRMMDVPDCYHIFPTANDTFFMHCRDGSLAKVGYGTKGNPKIKPTEVFHPEDEYLINHPAYSNKSGRLVWP 211 (352)
T ss_pred EEECCCCcEEEEEeCCCCcEEEEecCCccEEEeecCceEEEEecCCCceEEeeeeeecCCccccccCCceEcCCCcEEEE
Confidence 99998876554432100 0 000101 122 5666655
Q ss_pred eeCCCCEEEEECCCC-----eEEEeecC-------CCCCeEEEEECCCCCEEEEec----------CCCeEEEEeCCCce
Q psy4393 129 GSFDESVRIWDVRTG-----KCLKTLPA-------HSDPVSAVHFNRDGSLIVSSS----------YDGLCRIWDTASGQ 186 (247)
Q Consensus 129 ~~~d~~i~v~d~~~~-----~~~~~~~~-------~~~~i~~~~~~~~~~~l~~~~----------~dg~i~v~d~~~~~ 186 (247)
..+ |.|++.|+... ..+..+.. ..+.+..++++|+++.+++.. ..+.|.++|..+++
T Consensus 212 s~e-G~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~k 290 (352)
T TIGR02658 212 TYT-GKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKTGK 290 (352)
T ss_pred ecC-CeEEEEecCCCcceecceeeeccccccccccCCCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEECCCCe
Confidence 554 89999996432 22222211 123344589999999888742 12479999999999
Q ss_pred eeeeeccCCCCCeEEEEECCCCC-EEEEEE-cCCeEEEEECCCcceEEEE
Q psy4393 187 CLKTLIDDDNPPVSFVKFSPNGK-YILAAT-LDNTLKLWDSKVVTPAIIC 234 (247)
Q Consensus 187 ~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~-~dg~i~vwd~~~~~~~~~~ 234 (247)
.+..+... .....++++||++ +|++.. .++.|.++|..+.+.+..+
T Consensus 291 vi~~i~vG--~~~~~iavS~Dgkp~lyvtn~~s~~VsViD~~t~k~i~~i 338 (352)
T TIGR02658 291 RLRKIELG--HEIDSINVSQDAKPLLYALSTGDKTLYIFDAETGKELSSV 338 (352)
T ss_pred EEEEEeCC--CceeeEEECCCCCeEEEEeCCCCCcEEEEECcCCeEEeee
Confidence 88876544 3567899999999 877666 5789999999999888776
No 248
>KOG4190|consensus
Probab=99.42 E-value=6.9e-13 Score=106.73 Aligned_cols=203 Identities=20% Similarity=0.392 Sum_probs=145.2
Q ss_pred EEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCC-------CeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeE
Q psy4393 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-------GKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTL 93 (247)
Q Consensus 21 ~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 93 (247)
..+.||+..|..++--.+.+-+++++.|++|++|.+.. ..++.++..|..+|.++.|-.+-+.+++ .||.|
T Consensus 729 ~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~S--cD~gi 806 (1034)
T KOG4190|consen 729 CNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIAS--CDGGI 806 (1034)
T ss_pred ecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeee--ccCcc
Confidence 45568999999888766777788999999999998752 2356667789999999999988877755 48899
Q ss_pred EEEECCCceEEEEEe-----cCCccEEEEEEcCCCCEEEEe-eCCCCEEEEECCCCeEEEeecCC-----CCCeEEEEEC
Q psy4393 94 KIWELSSGKCLKTLK-----GHSNYVFCCNFNPQSNLIVSG-SFDESVRIWDVRTGKCLKTLPAH-----SDPVSAVHFN 162 (247)
Q Consensus 94 ~v~d~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~-~~d~~i~v~d~~~~~~~~~~~~~-----~~~i~~~~~~ 162 (247)
++||.--+..+..+. +..+.|.|+. +-+..+++.| +...+++++|.+.......++.. ..-+.+++..
T Consensus 807 HlWDPFigr~Laq~~dapk~~a~~~ikcl~-nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~R~iaVa 885 (1034)
T KOG4190|consen 807 HLWDPFIGRLLAQMEDAPKEGAGGNIKCLE-NVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALTRAIAVA 885 (1034)
T ss_pred eeecccccchhHhhhcCcccCCCceeEecc-cCcchheeeeccchhhheeeecccccceeeEEeccCCCCchheeEEEec
Confidence 999976665443221 1122343332 2234444444 77889999999988766555432 3457899999
Q ss_pred CCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEE-EECCCc
Q psy4393 163 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL-WDSKVV 228 (247)
Q Consensus 163 ~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v-wd~~~~ 228 (247)
+.|++++++-..|.+.+.|.++|+.+..+...+- ....++ .|..+.|+....|..+.| |-.-++
T Consensus 886 ~~GN~lAa~LSnGci~~LDaR~G~vINswrpmec-dllqla-apsdq~L~~saldHslaVnWhaldg 950 (1034)
T KOG4190|consen 886 DKGNKLAAALSNGCIAILDARNGKVINSWRPMEC-DLLQLA-APSDQALAQSALDHSLAVNWHALDG 950 (1034)
T ss_pred cCcchhhHHhcCCcEEEEecCCCceeccCCcccc-hhhhhc-CchhHHHHhhcccceeEeeehhcCC
Confidence 9999999999999999999999987776543221 112222 466677888778888888 765443
No 249
>KOG1240|consensus
Probab=99.39 E-value=4.1e-11 Score=104.26 Aligned_cols=181 Identities=22% Similarity=0.273 Sum_probs=127.2
Q ss_pred CCeEEEEEecccCCeEEEEECCC-CCEEEEEcCCCeEEEEECCCc-------eEEEEEecCCccEEEEEEcCCCCEEEEe
Q psy4393 58 DGKFEKTISGHKLGISDVAWSSD-SRLLVSGSDDKTLKIWELSSG-------KCLKTLKGHSNYVFCCNFNPQSNLIVSG 129 (247)
Q Consensus 58 ~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~v~d~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 129 (247)
.|..+..+..|...+..++.++. +.++++|+.||+|++|+.+.- +...+.......+.++...+.+..+|.+
T Consensus 1037 ~G~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~~Av~ 1116 (1431)
T KOG1240|consen 1037 RGILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQFAVS 1116 (1431)
T ss_pred cceEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCeEEEE
Confidence 34556666777888888888765 499999999999999998642 1112222245678888888999999999
Q ss_pred eCCCCEEEEECCCC--e-----EEEeecC-CCCCeEEE-EECC-CCC-EEEEecCCCeEEEEeCCCceeeeeec-cCCCC
Q psy4393 130 SFDESVRIWDVRTG--K-----CLKTLPA-HSDPVSAV-HFNR-DGS-LIVSSSYDGLCRIWDTASGQCLKTLI-DDDNP 197 (247)
Q Consensus 130 ~~d~~i~v~d~~~~--~-----~~~~~~~-~~~~i~~~-~~~~-~~~-~l~~~~~dg~i~v~d~~~~~~~~~~~-~~~~~ 197 (247)
+.||.|++.++... + ....... ..+.+..| ++.. .+. .++.+..-+.+..||++.....-++. ....+
T Consensus 1117 t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~~hG 1196 (1431)
T KOG1240|consen 1117 TKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQLRHG 1196 (1431)
T ss_pred cCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcCcccc
Confidence 99999999988652 1 1111111 12333333 3332 233 56777788899999998754332222 22346
Q ss_pred CeEEEEECCCCCEEEEEEcCCeEEEEECCCcceEEEEccCC
Q psy4393 198 PVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTPL 238 (247)
Q Consensus 198 ~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~ 238 (247)
.|+.++.+|.+.+++.|+..|.+.+||++-..|+..-..|.
T Consensus 1197 ~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~ 1237 (1431)
T KOG1240|consen 1197 LVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPA 1237 (1431)
T ss_pred ceeEEEecCCceEEEEecCCceEEEEEeecCceeecccCcc
Confidence 78999999999999999999999999999888877654443
No 250
>KOG2315|consensus
Probab=99.39 E-value=6e-10 Score=89.80 Aligned_cols=193 Identities=21% Similarity=0.379 Sum_probs=130.8
Q ss_pred CCCCeEEEEECCCCC--EEEE-----EeCCCeEEEEecCCCeEE-----EEEecccCCeEEEEECCCCCEE-EEEcC--C
Q psy4393 26 HTKAVSSVKFSPNGE--WLAS-----SSADKLIKIWGAYDGKFE-----KTISGHKLGISDVAWSSDSRLL-VSGSD--D 90 (247)
Q Consensus 26 h~~~v~~~~~s~~~~--~l~~-----~~~dg~v~iw~~~~~~~~-----~~~~~~~~~v~~~~~~~~~~~l-~~~~~--d 90 (247)
|...|+.+.+||.+. .+|+ .+.-..|++|.......- +.+. ...=-.+.|++-|.-| +.++. |
T Consensus 164 ~~~~i~~f~lSpgp~~~~vAvyvPe~kGaPa~vri~~~~~~~~~~~~a~ksFF--kadkvqm~WN~~gt~LLvLastdVD 241 (566)
T KOG2315|consen 164 SVSGITMLSLSPGPEPPFVAVYVPEKKGAPASVRIYKYPEEGQHQPVANKSFF--KADKVQMKWNKLGTALLVLASTDVD 241 (566)
T ss_pred eccceeeEEecCCCCCceEEEEccCCCCCCcEEEEeccccccccchhhhcccc--ccceeEEEeccCCceEEEEEEEeec
Confidence 567899999999754 4443 345668999976522111 1121 1112346788866543 22221 2
Q ss_pred ---------CeEEEEECCCceEEEEEecCCccEEEEEEcCCCCEEEEe--eCCCCEEEEECCCCeEEEeecCCCCCeEEE
Q psy4393 91 ---------KTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG--SFDESVRIWDVRTGKCLKTLPAHSDPVSAV 159 (247)
Q Consensus 91 ---------~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~--~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~ 159 (247)
..+++++++...+.-.+. ..++|.++.|+|++..++.+ ---..+.+||++. ..+..+ .+++-.++
T Consensus 242 ktn~SYYGEq~Lyll~t~g~s~~V~L~-k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr~-~~v~df--~egpRN~~ 317 (566)
T KOG2315|consen 242 KTNASYYGEQTLYLLATQGESVSVPLL-KEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLRG-KPVFDF--PEGPRNTA 317 (566)
T ss_pred CCCccccccceEEEEEecCceEEEecC-CCCCceEEEECCCCCEEEEEEecccceEEEEcCCC-CEeEeC--CCCCccce
Confidence 368888887434333332 46789999999999877654 4455789999974 444444 45677899
Q ss_pred EECCCCCEEEEecCC---CeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEc------CCeEEEEECCC
Q psy4393 160 HFNRDGSLIVSSSYD---GLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATL------DNTLKLWDSKV 227 (247)
Q Consensus 160 ~~~~~~~~l~~~~~d---g~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~------dg~i~vwd~~~ 227 (247)
-|+|.|++++.++.+ |.+.+||+.+.+.+..+.. ..-+.+.|+|||+++++++. |+-++||+...
T Consensus 318 ~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~i~~~~a---~~tt~~eW~PdGe~flTATTaPRlrvdNg~KiwhytG 391 (566)
T KOG2315|consen 318 FFNPHGNIILLAGFGNLPGDMEVWDVPNRKLIAKFKA---ANTTVFEWSPDGEYFLTATTAPRLRVDNGIKIWHYTG 391 (566)
T ss_pred EECCCCCEEEEeecCCCCCceEEEeccchhhcccccc---CCceEEEEcCCCcEEEEEeccccEEecCCeEEEEecC
Confidence 999999999887754 7999999998776655432 23356899999999999875 78899998643
No 251
>KOG1334|consensus
Probab=99.38 E-value=8.1e-12 Score=98.80 Aligned_cols=211 Identities=22% Similarity=0.305 Sum_probs=159.1
Q ss_pred ceEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEE-ecccCCeEEEEECC--CCCEEEEEcCCCeE
Q psy4393 17 YVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKLGISDVAWSS--DSRLLVSGSDDKTL 93 (247)
Q Consensus 17 ~~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~-~~~~~~v~~~~~~~--~~~~l~~~~~d~~i 93 (247)
..+...|..|.+-|..+-|...|..|++++.|..|.+||...+.....+ .+|...|..-.|-| +.+.|++++.||.+
T Consensus 132 ~~l~~kL~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqv 211 (559)
T KOG1334|consen 132 LRLQKKLNKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQV 211 (559)
T ss_pred hhhhhcccCCCCccceeeecccCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCce
Confidence 4455677889999999999999999999999999999998776655544 56777777777877 35679999999999
Q ss_pred EEEECCCceE---EEEEecCCccEEEEEEcCCC-CEEEEeeCCCCEEEEECCCCeEEEee---cCCCC---CeEEEEECC
Q psy4393 94 KIWELSSGKC---LKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVRTGKCLKTL---PAHSD---PVSAVHFNR 163 (247)
Q Consensus 94 ~v~d~~~~~~---~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~v~d~~~~~~~~~~---~~~~~---~i~~~~~~~ 163 (247)
++=.+..... .+.+..|.+.|..++.-|+. ..|.+++.|+.+.=+|++.+.+-..+ ..+.. ....++.+|
T Consensus 212 r~s~i~~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~Ia~~P 291 (559)
T KOG1334|consen 212 RVSEILETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKERVGLYTIAVDP 291 (559)
T ss_pred eeeeeccccceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCccceeeeeEecCC
Confidence 9876543221 33455678889999988865 56888999999999999877543222 22222 457788888
Q ss_pred CCC-EEEEecCCCeEEEEeCCCceee------ee-----eccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCC
Q psy4393 164 DGS-LIVSSSYDGLCRIWDTASGQCL------KT-----LIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKV 227 (247)
Q Consensus 164 ~~~-~l~~~~~dg~i~v~d~~~~~~~------~~-----~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~ 227 (247)
... .+++++.|..+++||.+.-... .. +.......|++++++.++.-|.++-.|-.|.+|....
T Consensus 292 ~nt~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~ 367 (559)
T KOG1334|consen 292 RNTNEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLASYNDEDIYLFNKSM 367 (559)
T ss_pred CCccccccCChhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCccceeeeecccceEEecccc
Confidence 665 7899999999999998753221 22 2223445789999998888888888899999996543
No 252
>PRK01029 tolB translocation protein TolB; Provisional
Probab=99.37 E-value=3.5e-10 Score=93.18 Aligned_cols=178 Identities=17% Similarity=0.186 Sum_probs=108.7
Q ss_pred CCeEEEEECCCCCEEEEEe-CCC----eEEEEecCCC---eEEEEEecccCCeEEEEECCCCCEEEEEc-CCCeEEEE--
Q psy4393 28 KAVSSVKFSPNGEWLASSS-ADK----LIKIWGAYDG---KFEKTISGHKLGISDVAWSSDSRLLVSGS-DDKTLKIW-- 96 (247)
Q Consensus 28 ~~v~~~~~s~~~~~l~~~~-~dg----~v~iw~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~v~-- 96 (247)
+.....+|+|||+.|+... .+| .+..|+...+ ................+|+|||+.|+..+ .++...+|
T Consensus 231 g~~~~p~wSPDG~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~ 310 (428)
T PRK01029 231 GNQLMPTFSPRKKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIM 310 (428)
T ss_pred CCccceEECCCCCEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEE
Confidence 3445688999999887644 223 2334665442 22222322223346789999999877665 45644444
Q ss_pred ECCC-ceEEEEEecCCccEEEEEEcCCCCEEEEeeCC---CCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEec
Q psy4393 97 ELSS-GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD---ESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSS 172 (247)
Q Consensus 97 d~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 172 (247)
++.. +.....+......+....|+|+|+.++....+ ..|.+||+.+++.. .+......+....|+|||+.|+..+
T Consensus 311 ~~~~~g~~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~-~Lt~~~~~~~~p~wSpDG~~L~f~~ 389 (428)
T PRK01029 311 QIDPEGQSPRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDY-QLTTSPENKESPSWAIDSLHLVYSA 389 (428)
T ss_pred ECcccccceEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeE-EccCCCCCccceEECCCCCEEEEEE
Confidence 4432 22234444444456678899999988876543 36899999888653 3333334567789999999876543
Q ss_pred C---CCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCC
Q psy4393 173 Y---DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG 208 (247)
Q Consensus 173 ~---dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~ 208 (247)
. ...+.++|+.+++..... . ....+...+|+|-.
T Consensus 390 ~~~g~~~L~~vdl~~g~~~~Lt-~-~~g~~~~p~Ws~~~ 426 (428)
T PRK01029 390 GNSNESELYLISLITKKTRKIV-I-GSGEKRFPSWGAFP 426 (428)
T ss_pred CCCCCceEEEEECCCCCEEEee-c-CCCcccCceecCCC
Confidence 2 346888898877643322 2 22334567788753
No 253
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.36 E-value=3.2e-09 Score=96.07 Aligned_cols=199 Identities=15% Similarity=0.216 Sum_probs=132.3
Q ss_pred eEEEEECCCCCEEEEEe-CCCeEEEEecCCCeEEEEEecc-----------------cCCeEEEEECC-CCCEEEEEcCC
Q psy4393 30 VSSVKFSPNGEWLASSS-ADKLIKIWGAYDGKFEKTISGH-----------------KLGISDVAWSS-DSRLLVSGSDD 90 (247)
Q Consensus 30 v~~~~~s~~~~~l~~~~-~dg~v~iw~~~~~~~~~~~~~~-----------------~~~v~~~~~~~-~~~~l~~~~~d 90 (247)
...++++++++.|+.+. .++.|+++|..++.. ..+.+. -..-..++++| ++..+++...+
T Consensus 626 P~GIavd~~gn~LYVaDt~n~~Ir~id~~~~~V-~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~ 704 (1057)
T PLN02919 626 PQGLAYNAKKNLLYVADTENHALREIDFVNETV-RTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQ 704 (1057)
T ss_pred CcEEEEeCCCCEEEEEeCCCceEEEEecCCCEE-EEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCC
Confidence 46788888887665554 456788888766543 222110 11235789999 56666777788
Q ss_pred CeEEEEECCCceEEEEEecC---------------CccEEEEEEcCCCC-EEEEeeCCCCEEEEECCCCeEEEee-----
Q psy4393 91 KTLKIWELSSGKCLKTLKGH---------------SNYVFCCNFNPQSN-LIVSGSFDESVRIWDVRTGKCLKTL----- 149 (247)
Q Consensus 91 ~~i~v~d~~~~~~~~~~~~~---------------~~~v~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~----- 149 (247)
+.|++||..++... .+.+. ......++++|++. ++++...++.|++||+.++......
T Consensus 705 ~~I~v~d~~~g~v~-~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~ 783 (1057)
T PLN02919 705 HQIWEYNISDGVTR-VFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPT 783 (1057)
T ss_pred CeEEEEECCCCeEE-EEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccc
Confidence 99999998776432 22110 11234688999988 4455566789999999876432111
Q ss_pred --------cCC--------CCCeEEEEECCCCCEEEEecCCCeEEEEeCCCceeeeeeccC------------CCCCeEE
Q psy4393 150 --------PAH--------SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD------------DNPPVSF 201 (247)
Q Consensus 150 --------~~~--------~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~------------~~~~v~~ 201 (247)
... -.....++++++|.++++-..++.|++||..++......... .-.....
T Consensus 784 ~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~G 863 (1057)
T PLN02919 784 FSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAG 863 (1057)
T ss_pred cCcccccccCCCCchhhhhccCCceeeEeCCCcEEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceE
Confidence 000 012357889999998888888999999999877644322111 0012457
Q ss_pred EEECCCCCEEEEEEcCCeEEEEECCCcce
Q psy4393 202 VKFSPNGKYILAATLDNTLKLWDSKVVTP 230 (247)
Q Consensus 202 ~~~s~~~~~l~~~~~dg~i~vwd~~~~~~ 230 (247)
++++++|+.+++-+.+++|++||.++...
T Consensus 864 Iavd~dG~lyVaDt~Nn~Irvid~~~~~~ 892 (1057)
T PLN02919 864 LALGENGRLFVADTNNSLIRYLDLNKGEA 892 (1057)
T ss_pred EEEeCCCCEEEEECCCCEEEEEECCCCcc
Confidence 89999999888888899999999988654
No 254
>KOG0974|consensus
Probab=99.36 E-value=1.5e-11 Score=105.08 Aligned_cols=148 Identities=27% Similarity=0.432 Sum_probs=124.2
Q ss_pred EECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceEEE-EEecCCc
Q psy4393 34 KFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLK-TLKGHSN 112 (247)
Q Consensus 34 ~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~-~~~~~~~ 112 (247)
.++++.-++++|+.-+.|.+|.....+....+.+|.+.+.++.|+.||.++++.++|..+++|++.+.+... ..-+|..
T Consensus 140 g~s~~~~~i~~gsv~~~iivW~~~~dn~p~~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsa 219 (967)
T KOG0974|consen 140 GDSAEELYIASGSVFGEIIVWKPHEDNKPIRLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSA 219 (967)
T ss_pred eccCcEEEEEeccccccEEEEeccccCCcceecccCCceEEEEEccCCcEEEEEecCcceeeeecccccccCcccccccc
Confidence 356666688899999999999986433334688999999999999999999999999999999999987655 5567999
Q ss_pred cEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCC-CCeEEEEECCCCCEEEEecCCCeEEEEeCCC
Q psy4393 113 YVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHS-DPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 184 (247)
Q Consensus 113 ~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~-~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~ 184 (247)
+++.+++.|. .+++++.|-+.++|+.. +..+..+..|. ..+..++..++...+++++.||.+++||+..
T Consensus 220 Rvw~~~~~~n--~i~t~gedctcrvW~~~-~~~l~~y~~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l~~ 289 (967)
T KOG0974|consen 220 RVWACCFLPN--RIITVGEDCTCRVWGVN-GTQLEVYDEHSGKGIWKIAVPIGVIIKVTGGNDSTLKLWDLNG 289 (967)
T ss_pred eeEEEEeccc--eeEEeccceEEEEEecc-cceehhhhhhhhcceeEEEEcCCceEEEeeccCcchhhhhhhc
Confidence 9999999997 89999999999999765 34444666654 4588899999888999999999999998754
No 255
>KOG1334|consensus
Probab=99.33 E-value=1.8e-11 Score=96.86 Aligned_cols=207 Identities=16% Similarity=0.287 Sum_probs=150.6
Q ss_pred EEEecCCCCeEEEEECCCCC-EEEEEeCCCeEEEEecCCCeEEEEEe---ccc---CCeEEEEECCCCC-EEEEEcCCCe
Q psy4393 21 FTLAGHTKAVSSVKFSPNGE-WLASSSADKLIKIWGAYDGKFEKTIS---GHK---LGISDVAWSSDSR-LLVSGSDDKT 92 (247)
Q Consensus 21 ~~~~~h~~~v~~~~~s~~~~-~l~~~~~dg~v~iw~~~~~~~~~~~~---~~~---~~v~~~~~~~~~~-~l~~~~~d~~ 92 (247)
..+..|.++|..++..|+.. .+.+++.|+.+.=.|+........+. .+. ....+++..|... .+++++.|..
T Consensus 226 ~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~Ia~~P~nt~~faVgG~dqf 305 (559)
T KOG1334|consen 226 KRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKERVGLYTIAVDPRNTNEFAVGGSDQF 305 (559)
T ss_pred eecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCccceeeeeEecCCCCccccccCChhhh
Confidence 34567999999999999765 57889999999988876654333221 122 2567888888544 7899999999
Q ss_pred EEEEECCCceE------EEEEe------cCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCC------------eEEE-
Q psy4393 93 LKIWELSSGKC------LKTLK------GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG------------KCLK- 147 (247)
Q Consensus 93 i~v~d~~~~~~------~~~~~------~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~------------~~~~- 147 (247)
+++||.+.-.. +..+. ...-.|.++.++.++.-+.+...|-.|++|.-..+ ..++
T Consensus 306 ~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~~~G~~p~~~s~~~~~~k~ 385 (559)
T KOG1334|consen 306 ARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLASYNDEDIYLFNKSMGDGSEPDPSSPREQYVKR 385 (559)
T ss_pred hhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCccceeeeecccceEEeccccccCCCCCCCcchhhccch
Confidence 99999764221 11111 12335889999988888888888889999954322 1122
Q ss_pred eecCCCCC--eEEEE-ECCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEE
Q psy4393 148 TLPAHSDP--VSAVH-FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224 (247)
Q Consensus 148 ~~~~~~~~--i~~~~-~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd 224 (247)
..++|... |..+- |-|...++++|+.-|.|.+|+-.+++.+..+... ...|+||.-+|.-..||+++.|.-|+||.
T Consensus 386 vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~eii~~MegD-r~VVNCLEpHP~~PvLAsSGid~DVKIWT 464 (559)
T KOG1334|consen 386 VYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGEIIRFMEGD-RHVVNCLEPHPHLPVLASSGIDHDVKIWT 464 (559)
T ss_pred hhcccccccccceeeeccCccceEEecCccceEEEEecchhHHHHHhhcc-cceEeccCCCCCCchhhccCCccceeeec
Confidence 25666543 44443 4578899999999999999999988876654443 34899999999999999999999999998
Q ss_pred CCCc
Q psy4393 225 SKVV 228 (247)
Q Consensus 225 ~~~~ 228 (247)
....
T Consensus 465 P~~~ 468 (559)
T KOG1334|consen 465 PLTA 468 (559)
T ss_pred CCcc
Confidence 7543
No 256
>KOG0280|consensus
Probab=99.32 E-value=9.2e-10 Score=82.27 Aligned_cols=185 Identities=15% Similarity=0.181 Sum_probs=126.9
Q ss_pred CCCeEEEEecCCCeEEE---EEecccCCeEEEEECC---CCC-EEEEEcCCCeEEEEECCCceEEEEEecCC------cc
Q psy4393 47 ADKLIKIWGAYDGKFEK---TISGHKLGISDVAWSS---DSR-LLVSGSDDKTLKIWELSSGKCLKTLKGHS------NY 113 (247)
Q Consensus 47 ~dg~v~iw~~~~~~~~~---~~~~~~~~v~~~~~~~---~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~~~~------~~ 113 (247)
..|.+.+|++.+.+... ........+..+.|+. +|. .++-+...|.|.++...-......+++-. ..
T Consensus 44 R~Gkl~Lys~~d~~~~~l~~~q~~dts~~~dm~w~~~~~~g~~~l~~a~a~G~i~~~r~~~~~ss~~L~~ls~~ki~~~~ 123 (339)
T KOG0280|consen 44 RSGKLHLYSLEDMKLSPLDTLQCTDTSTEFDMLWRIRETDGDFNLLDAHARGQIQLYRNDEDESSVHLRGLSSKKISVVE 123 (339)
T ss_pred eccceEEEeecccccCccceeeeecccccceeeeeeccCCccceeeeccccceEEEEeeccceeeeeecccchhhhhhee
Confidence 35678888876544322 2223345577788863 455 45667778899988765444333333221 12
Q ss_pred EEEEEEcCCCCEEEEeeCCCCEEEEECCCCeE--EEeecCCCCCeEEEEECC-CCCEEEEecCCCeEEEEeCCC-ceeee
Q psy4393 114 VFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC--LKTLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTAS-GQCLK 189 (247)
Q Consensus 114 v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~--~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~v~d~~~-~~~~~ 189 (247)
..++.|++.+..++++..+|.+.+.+...... ++.++.|+-.+....|+. +.+++++|+.|+.+.-||++. ++.+.
T Consensus 124 ~lslD~~~~~~~i~vs~s~G~~~~v~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~ 203 (339)
T KOG0280|consen 124 ALSLDISTSGTKIFVSDSRGSISGVYETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIW 203 (339)
T ss_pred eeEEEeeccCceEEEEcCCCcEEEEecceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcceee
Confidence 45678999999999999999998665544433 346788888888888875 346889999999999999993 33333
Q ss_pred eeccCCCCCeEEEEECC-CCCEEEEEEcCCeEEEEECCC-cceE
Q psy4393 190 TLIDDDNPPVSFVKFSP-NGKYILAATLDNTLKLWDSKV-VTPA 231 (247)
Q Consensus 190 ~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~vwd~~~-~~~~ 231 (247)
.-...+...|.++.-+| .+.++++|+.|-.|++||.+. ++|+
T Consensus 204 ~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl 247 (339)
T KOG0280|consen 204 HNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKPL 247 (339)
T ss_pred ecceeeecceEEEecCCCCCceEEEeccccceeeeehhcccCcc
Confidence 22233456677777665 577999999999999999995 4554
No 257
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=99.31 E-value=4.4e-08 Score=78.78 Aligned_cols=199 Identities=14% Similarity=0.272 Sum_probs=129.6
Q ss_pred CCeEEEEECCCCCEEEEEeC----CCeEEEEecCC--CeEEE--EEecccCCeEEEEECCCCCEEEEEc-CCCeEEEEEC
Q psy4393 28 KAVSSVKFSPNGEWLASSSA----DKLIKIWGAYD--GKFEK--TISGHKLGISDVAWSSDSRLLVSGS-DDKTLKIWEL 98 (247)
Q Consensus 28 ~~v~~~~~s~~~~~l~~~~~----dg~v~iw~~~~--~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~v~d~ 98 (247)
....-++++|++++|+++.+ ++.|..|.+.. +.... ...........++++|++++++++. .+|.+.++++
T Consensus 37 ~~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~~i~~~~~g~~l~vany~~g~v~v~~l 116 (345)
T PF10282_consen 37 ENPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGSSPCHIAVDPDGRFLYVANYGGGSVSVFPL 116 (345)
T ss_dssp SSECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSSCEEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred CCCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeeeeccCCCCcEEEEEecCCCEEEEEEccCCeEEEEEc
Confidence 44566889999999988766 56898888765 33322 2332334456789999999988876 4889999999
Q ss_pred CC-ceEEEE---Ee----------cCCccEEEEEEcCCCCEEEEee-CCCCEEEEECCCCe--E--EEeec-CCCCCeEE
Q psy4393 99 SS-GKCLKT---LK----------GHSNYVFCCNFNPQSNLIVSGS-FDESVRIWDVRTGK--C--LKTLP-AHSDPVSA 158 (247)
Q Consensus 99 ~~-~~~~~~---~~----------~~~~~v~~~~~~~~~~~l~~~~-~d~~i~v~d~~~~~--~--~~~~~-~~~~~i~~ 158 (247)
.. +..... ++ .......++.++|+++++++.. ....|.+|++.... . ...+. .....-+.
T Consensus 117 ~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh 196 (345)
T PF10282_consen 117 DDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRH 196 (345)
T ss_dssp CTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTTEEEEEEE-TTS-TEEEEEEEECSTTSSEEE
T ss_pred cCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCCCEEEEEEEeCCCceEEEeeccccccCCCCcE
Confidence 86 332221 11 1234567899999999887754 34579999987654 2 12222 22344678
Q ss_pred EEECCCCCEEEEe-cCCCeEEEEeCC--Ccee--eeeecc---C--CCCCeEEEEECCCCCEEEEEE-cCCeEEEEECC
Q psy4393 159 VHFNRDGSLIVSS-SYDGLCRIWDTA--SGQC--LKTLID---D--DNPPVSFVKFSPNGKYILAAT-LDNTLKLWDSK 226 (247)
Q Consensus 159 ~~~~~~~~~l~~~-~~dg~i~v~d~~--~~~~--~~~~~~---~--~~~~v~~~~~s~~~~~l~~~~-~dg~i~vwd~~ 226 (247)
+.|+|+++++++. ..++.|.+|++. +++. ...... . .......++++|||++|+++. ..+.|.+|+.+
T Consensus 197 ~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d 275 (345)
T PF10282_consen 197 LAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSNRGSNSISVFDLD 275 (345)
T ss_dssp EEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEECTTTEEEEEEEC
T ss_pred EEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccccccccCCceeEEEecCCCEEEEEeccCCEEEEEEEe
Confidence 9999999987665 456789999887 4332 222211 1 112467899999999998876 46799999984
No 258
>KOG1409|consensus
Probab=99.31 E-value=1.8e-10 Score=87.76 Aligned_cols=211 Identities=20% Similarity=0.333 Sum_probs=146.9
Q ss_pred EEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCC-CeEEEEE-ecccCCeEEEEECCCCCEEEEEcCCCeEEEE
Q psy4393 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-GKFEKTI-SGHKLGISDVAWSSDSRLLVSGSDDKTLKIW 96 (247)
Q Consensus 19 ~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~-~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~ 96 (247)
+-..+.||...|+....-|-.+-+++.+.|.++++|--.+ ++.-..+ ..-..+++++.+.++...|+++-.+|.+.-+
T Consensus 16 ll~~~eG~~d~vn~~~l~~~e~gv~~~s~drtvrv~lkrds~q~wpsI~~~mP~~~~~~~y~~e~~~L~vg~~ngtvtef 95 (404)
T KOG1409|consen 16 LLSKIEGSQDDVNAAILIPKEEGVISVSEDRTVRVWLKRDSGQYWPSIYHYMPSPCSAMEYVSESRRLYVGQDNGTVTEF 95 (404)
T ss_pred hhhhhcCchhhhhhheeccCCCCeEEccccceeeeEEeccccccCchhhhhCCCCceEeeeeccceEEEEEEecceEEEE
Confidence 3344678999999999988888899999999999995433 2222222 2235668899999999999999889988776
Q ss_pred ECCC----ceEEEEEecCCccEEEEEEcCCCCEEEEeeCCC---------------------------------------
Q psy4393 97 ELSS----GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE--------------------------------------- 133 (247)
Q Consensus 97 d~~~----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--------------------------------------- 133 (247)
.+.. ....+....|...+..+.|+-....+++.+.|.
T Consensus 96 s~sedfnkm~~~r~~~~h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg~Y~~~~~~t~~~~d~~~~fvGd~~g 175 (404)
T KOG1409|consen 96 ALSEDFNKMTFLKDYLAHQARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRLGGYNFETPASALQFDALYAFVGDHSG 175 (404)
T ss_pred EhhhhhhhcchhhhhhhhhcceeeEEecCCceeEEEeccccceEEEeeccCCcccceEeeccCCCCceeeEEEEeccccc
Confidence 5432 222233334444454444444334444333332
Q ss_pred CEEEEEC--CCCeEEEeecCCCCCeEEEEECCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEE
Q psy4393 134 SVRIWDV--RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 211 (247)
Q Consensus 134 ~i~v~d~--~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 211 (247)
.+....+ ..-..+..+.+|.+++.+++|.|....|++|..|..+.+||+...+........+...|..+..-+.-+.|
T Consensus 176 qvt~lr~~~~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~l~~~~~t~~l 255 (404)
T KOG1409|consen 176 QITMLKLEQNGCQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQALSYAQHTRQL 255 (404)
T ss_pred ceEEEEEeecCCceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCcceeeeeccchhhhhhhhhhhhheee
Confidence 2221111 11234566788899999999999999999999999999999987665555555556667777777777899
Q ss_pred EEEEcCCeEEEEECCCcc
Q psy4393 212 LAATLDNTLKLWDSKVVT 229 (247)
Q Consensus 212 ~~~~~dg~i~vwd~~~~~ 229 (247)
.+++.||.|.+||.+.+.
T Consensus 256 ~S~~edg~i~~w~mn~~r 273 (404)
T KOG1409|consen 256 ISCGEDGGIVVWNMNVKR 273 (404)
T ss_pred eeccCCCeEEEEecccee
Confidence 999999999999987653
No 259
>KOG0280|consensus
Probab=99.30 E-value=1.3e-09 Score=81.48 Aligned_cols=179 Identities=19% Similarity=0.251 Sum_probs=124.3
Q ss_pred CCCeEEEEECC---CCC-EEEEEeCCCeEEEEecCCCeEEEEEec---ccC---CeEEEEECCCCCEEEEEcCCCeEEEE
Q psy4393 27 TKAVSSVKFSP---NGE-WLASSSADKLIKIWGAYDGKFEKTISG---HKL---GISDVAWSSDSRLLVSGSDDKTLKIW 96 (247)
Q Consensus 27 ~~~v~~~~~s~---~~~-~l~~~~~dg~v~iw~~~~~~~~~~~~~---~~~---~v~~~~~~~~~~~l~~~~~d~~i~v~ 96 (247)
+..+..+.|.. +|. .++-+...|.|.++..........+.+ ... ...++.|++.+..+++...+|.+.+-
T Consensus 69 ts~~~dm~w~~~~~~g~~~l~~a~a~G~i~~~r~~~~~ss~~L~~ls~~ki~~~~~lslD~~~~~~~i~vs~s~G~~~~v 148 (339)
T KOG0280|consen 69 TSTEFDMLWRIRETDGDFNLLDAHARGQIQLYRNDEDESSVHLRGLSSKKISVVEALSLDISTSGTKIFVSDSRGSISGV 148 (339)
T ss_pred ccccceeeeeeccCCccceeeeccccceEEEEeeccceeeeeecccchhhhhheeeeEEEeeccCceEEEEcCCCcEEEE
Confidence 34455566642 444 345567788898887654333322222 111 24567899999999999999998866
Q ss_pred ECCCceE--EEEEecCCccEEEEEEcC-CCCEEEEeeCCCCEEEEECCC-CeEEEe-ecCCCCCeEEEEECC-CCCEEEE
Q psy4393 97 ELSSGKC--LKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVRT-GKCLKT-LPAHSDPVSAVHFNR-DGSLIVS 170 (247)
Q Consensus 97 d~~~~~~--~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~v~d~~~-~~~~~~-~~~~~~~i~~~~~~~-~~~~l~~ 170 (247)
+...... ++..+.|....+.+.|+. +.+++++|+.|+.+..||+|. ++.+.. .+.|...|.++.-+| .+.++++
T Consensus 149 ~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~n~kvH~~GV~SI~ss~~~~~~I~T 228 (339)
T KOG0280|consen 149 YETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIWHNSKVHTSGVVSIYSSPPKPTYIAT 228 (339)
T ss_pred ecceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcceeeecceeeecceEEEecCCCCCceEEE
Confidence 6544432 336788888888888865 447899999999999999994 333433 567777888887776 5779999
Q ss_pred ecCCCeEEEEeCCC-ceeeeeeccCCCCCeEEEEECCC
Q psy4393 171 SSYDGLCRIWDTAS-GQCLKTLIDDDNPPVSFVKFSPN 207 (247)
Q Consensus 171 ~~~dg~i~v~d~~~-~~~~~~~~~~~~~~v~~~~~s~~ 207 (247)
|++|..|++||.++ ++++.. ....+.|..+.++|.
T Consensus 229 GsYDe~i~~~DtRnm~kPl~~--~~v~GGVWRi~~~p~ 264 (339)
T KOG0280|consen 229 GSYDECIRVLDTRNMGKPLFK--AKVGGGVWRIKHHPE 264 (339)
T ss_pred eccccceeeeehhcccCcccc--CccccceEEEEecch
Confidence 99999999999984 444432 233467788888875
No 260
>KOG4547|consensus
Probab=99.29 E-value=1.5e-09 Score=88.05 Aligned_cols=142 Identities=15% Similarity=0.264 Sum_probs=121.2
Q ss_pred CEEEEEeCCCeEEEEecCCCeEEEEEe--cccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceEEEEEecCCccEEEE
Q psy4393 40 EWLASSSADKLIKIWGAYDGKFEKTIS--GHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCC 117 (247)
Q Consensus 40 ~~l~~~~~dg~v~iw~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~ 117 (247)
..++-|...|.|.+|+...++....+. .|.++|.++.++.+-..|.+++.|+.+..|+.......+..+.....+..+
T Consensus 71 ~~lvlgt~~g~v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~~sl 150 (541)
T KOG4547|consen 71 SMLVLGTPQGSVLLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPLVSSL 150 (541)
T ss_pred eEEEeecCCccEEEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCCCccceE
Confidence 357778889999999998888877765 678889999999888889999999999999999999999999888889999
Q ss_pred EEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCC-----CCEEEEe-cCCCeEEEEeCC
Q psy4393 118 NFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRD-----GSLIVSS-SYDGLCRIWDTA 183 (247)
Q Consensus 118 ~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~-----~~~l~~~-~~dg~i~v~d~~ 183 (247)
+.+||+..+++++ +.|++||+.+++.+..|..|.++|+++.|.-+ |.+++++ ..+..+.+|-.+
T Consensus 151 ~is~D~~~l~~as--~~ik~~~~~~kevv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v~ 220 (541)
T KOG4547|consen 151 CISPDGKILLTAS--RQIKVLDIETKEVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVWVVE 220 (541)
T ss_pred EEcCCCCEEEecc--ceEEEEEccCceEEEEecCCCcceEEEEEEEeccccccceeeeccccccceeEEEEE
Confidence 9999999999875 68999999999999999999999999999766 5665543 345556666443
No 261
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=99.25 E-value=9.7e-09 Score=81.75 Aligned_cols=172 Identities=17% Similarity=0.262 Sum_probs=130.2
Q ss_pred CCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCC-eEEEEECCCceEEEEEecCCccEEE
Q psy4393 38 NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDK-TLKIWELSSGKCLKTLKGHSNYVFC 116 (247)
Q Consensus 38 ~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-~i~v~d~~~~~~~~~~~~~~~~v~~ 116 (247)
+|.+++..++ |...+.+...+...+ -++..+|.-..+.-+++-++.|..|| .+-++|..+++. +.+...-+.|.+
T Consensus 331 ~Gd~ia~VSR-GkaFi~~~~~~~~iq--v~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e~-kr~e~~lg~I~a 406 (668)
T COG4946 331 NGDYIALVSR-GKAFIMRPWDGYSIQ--VGKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGEV-KRIEKDLGNIEA 406 (668)
T ss_pred CCcEEEEEec-CcEEEECCCCCeeEE--cCCCCceEEEEEccCCcceEEeccCCceEEEEecCCceE-EEeeCCccceEE
Confidence 6778877664 677777765554332 24566688777877777888899998 899999988764 445556778999
Q ss_pred EEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCCC----eEEEEeCCCceeeeeec
Q psy4393 117 CNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG----LCRIWDTASGQCLKTLI 192 (247)
Q Consensus 117 ~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg----~i~v~d~~~~~~~~~~~ 192 (247)
+..+++|+.++.+.....+.+.|+.++.....-+...+-|+...|+|+++++|-+--+| .|++||+.+++......
T Consensus 407 v~vs~dGK~~vvaNdr~el~vididngnv~~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~Kiy~vTT 486 (668)
T COG4946 407 VKVSPDGKKVVVANDRFELWVIDIDNGNVRLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKIYDVTT 486 (668)
T ss_pred EEEcCCCcEEEEEcCceEEEEEEecCCCeeEecccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCeEEEecC
Confidence 99999999999999889999999999986555556667899999999999998776555 79999999887543322
Q ss_pred cCCCCCeEEEEECCCCCEEEEEE
Q psy4393 193 DDDNPPVSFVKFSPNGKYILAAT 215 (247)
Q Consensus 193 ~~~~~~v~~~~~s~~~~~l~~~~ 215 (247)
.. +-=.+-+|+||+++|..-+
T Consensus 487 ~t--a~DfsPaFD~d~ryLYfLs 507 (668)
T COG4946 487 PT--AYDFSPAFDPDGRYLYFLS 507 (668)
T ss_pred Cc--ccccCcccCCCCcEEEEEe
Confidence 11 1112357999999987654
No 262
>KOG1354|consensus
Probab=99.23 E-value=6.9e-10 Score=84.67 Aligned_cols=200 Identities=21% Similarity=0.403 Sum_probs=134.1
Q ss_pred CCCeEEEEECCCCC--EEEEEeCCCeEEEEecCCCeEEE-----------------------------------EE-ecc
Q psy4393 27 TKAVSSVKFSPNGE--WLASSSADKLIKIWGAYDGKFEK-----------------------------------TI-SGH 68 (247)
Q Consensus 27 ~~~v~~~~~s~~~~--~l~~~~~dg~v~iw~~~~~~~~~-----------------------------------~~-~~~ 68 (247)
...|..+.|.++++ .++..+.|.++++|-+....... .+ ..|
T Consensus 84 eEKinkIrw~~~~n~a~FLlstNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaH 163 (433)
T KOG1354|consen 84 EEKINKIRWLDDGNLAEFLLSTNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAH 163 (433)
T ss_pred hhhhhhceecCCCCccEEEEecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccc
Confidence 45688999998766 45667789999999764321100 00 135
Q ss_pred cCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceE---EEEEecC-----CccEEEEEEcCC-CCEEEEeeCCCCEEEEE
Q psy4393 69 KLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKC---LKTLKGH-----SNYVFCCNFNPQ-SNLIVSGSFDESVRIWD 139 (247)
Q Consensus 69 ~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~---~~~~~~~-----~~~v~~~~~~~~-~~~l~~~~~d~~i~v~d 139 (247)
...|.++.++.|.+.++++ +|-.|.+|+++-... +-.++.+ ...|.+..|+|. .+.++..+..|.|++.|
T Consensus 164 tyhiNSIS~NsD~Et~lSA-DdLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcD 242 (433)
T KOG1354|consen 164 TYHINSISVNSDKETFLSA-DDLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCD 242 (433)
T ss_pred eeEeeeeeecCccceEeec-cceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEee
Confidence 5568899999999988877 577899999864321 1122222 234677889884 57888899999999999
Q ss_pred CCCCeE------EEeecCC----------CCCeEEEEECCCCCEEEEecCCCeEEEEeC-CCceeeeeeccCC-------
Q psy4393 140 VRTGKC------LKTLPAH----------SDPVSAVHFNRDGSLIVSSSYDGLCRIWDT-ASGQCLKTLIDDD------- 195 (247)
Q Consensus 140 ~~~~~~------~~~~~~~----------~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~-~~~~~~~~~~~~~------- 195 (247)
+|.... +...+.. -..|..+.|+++|+++++-. --++++||+ ...++...+..+.
T Consensus 243 mR~~aLCd~hsKlfEepedp~~rsffseiIsSISDvKFs~sGryilsRD-yltvk~wD~nme~~pv~t~~vh~~lr~kLc 321 (433)
T KOG1354|consen 243 MRQSALCDAHSKLFEEPEDPSSRSFFSEIISSISDVKFSHSGRYILSRD-YLTVKLWDLNMEAKPVETYPVHEYLRSKLC 321 (433)
T ss_pred chhhhhhcchhhhhccccCCcchhhHHHHhhhhhceEEccCCcEEEEec-cceeEEEeccccCCcceEEeehHhHHHHHH
Confidence 985321 1111111 12578899999999998653 257999998 3444443332111
Q ss_pred ----CCCe---EEEEECCCCCEEEEEEcCCeEEEEECCCc
Q psy4393 196 ----NPPV---SFVKFSPNGKYILAATLDNTLKLWDSKVV 228 (247)
Q Consensus 196 ----~~~v---~~~~~s~~~~~l~~~~~dg~i~vwd~~~~ 228 (247)
...| -.++|+.++.++++|+..+.+++|+...+
T Consensus 322 ~lYEnD~IfdKFec~~sg~~~~v~TGsy~n~frvf~~~~g 361 (433)
T KOG1354|consen 322 SLYENDAIFDKFECSWSGNDSYVMTGSYNNVFRVFNLARG 361 (433)
T ss_pred HHhhccchhheeEEEEcCCcceEecccccceEEEecCCCC
Confidence 1111 34789999999999999999999995443
No 263
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=99.21 E-value=1.5e-07 Score=72.12 Aligned_cols=198 Identities=18% Similarity=0.153 Sum_probs=127.2
Q ss_pred EEEECC-CCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEEC-CCCCEEEEEcCCCeEEEEECCCceEEEEEec
Q psy4393 32 SVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS-SDSRLLVSGSDDKTLKIWELSSGKCLKTLKG 109 (247)
Q Consensus 32 ~~~~s~-~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~ 109 (247)
+++|.+ ++.++++--..+.|..|+..++.... +.... ...+++. +++.++ .+...+ +.++|..+++.......
T Consensus 4 gp~~d~~~g~l~~~D~~~~~i~~~~~~~~~~~~-~~~~~--~~G~~~~~~~g~l~-v~~~~~-~~~~d~~~g~~~~~~~~ 78 (246)
T PF08450_consen 4 GPVWDPRDGRLYWVDIPGGRIYRVDPDTGEVEV-IDLPG--PNGMAFDRPDGRLY-VADSGG-IAVVDPDTGKVTVLADL 78 (246)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTTTEEEE-EESSS--EEEEEEECTTSEEE-EEETTC-EEEEETTTTEEEEEEEE
T ss_pred ceEEECCCCEEEEEEcCCCEEEEEECCCCeEEE-EecCC--CceEEEEccCCEEE-EEEcCc-eEEEecCCCcEEEEeec
Confidence 568988 66677776678899999987765433 22222 5666777 665544 444444 45569888764433332
Q ss_pred -----CCccEEEEEEcCCCCEEEEeeCC--------CCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEE-EecCCC
Q psy4393 110 -----HSNYVFCCNFNPQSNLIVSGSFD--------ESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIV-SSSYDG 175 (247)
Q Consensus 110 -----~~~~v~~~~~~~~~~~l~~~~~d--------~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~dg 175 (247)
.......+.++|+|++.++.... |.+..++.. ++..... ..-...+.++|+|+++.|+ +-+..+
T Consensus 79 ~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~-~~~~~pNGi~~s~dg~~lyv~ds~~~ 156 (246)
T PF08450_consen 79 PDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVA-DGLGFPNGIAFSPDGKTLYVADSFNG 156 (246)
T ss_dssp ETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEE-EEESSEEEEEEETTSSEEEEEETTTT
T ss_pred cCCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeEEEEe-cCcccccceEECCcchheeecccccc
Confidence 33457789999999987776543 457777776 4432222 2234568899999998776 556778
Q ss_pred eEEEEeCCCce--e--eeeeccCCC--CCeEEEEECCCCCEEEEEEcCCeEEEEECCCcceEEEEccC
Q psy4393 176 LCRIWDTASGQ--C--LKTLIDDDN--PPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTP 237 (247)
Q Consensus 176 ~i~v~d~~~~~--~--~~~~~~~~~--~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~ 237 (247)
.|..|++.... . ...+..... ...-.++++.+|++.++.-..+.|.++|.+ ++.+..+..|
T Consensus 157 ~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p~-G~~~~~i~~p 223 (246)
T PF08450_consen 157 RIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDPD-GKLLREIELP 223 (246)
T ss_dssp EEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEETT-SCEEEEEE-S
T ss_pred eeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEECCC-ccEEEEEcCC
Confidence 89999875321 1 122221111 235679999999988887789999999988 7777777776
No 264
>KOG2041|consensus
Probab=99.20 E-value=3.1e-10 Score=94.24 Aligned_cols=200 Identities=17% Similarity=0.289 Sum_probs=138.7
Q ss_pred CCCceEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEe--cccCCeEEEEECCCCCEEEEEcCCC
Q psy4393 14 KPNYVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS--GHKLGISDVAWSSDSRLLVSGSDDK 91 (247)
Q Consensus 14 ~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~ 91 (247)
..+..+..++.||.+.|.-+.|+.+.+.|-+...+|.|.+|-+..+....... ....-|.+++|..||..|+..-.||
T Consensus 58 ~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDG 137 (1189)
T KOG2041|consen 58 ASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDTSGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDG 137 (1189)
T ss_pred ccccchhhhhccCcceEEEEEeccccccccccCCCceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccC
Confidence 44567788899999999999999999999999999999999987765432221 2344588999999999999999999
Q ss_pred eEEEEECCCceEE-EEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCe-------E-EE---eecCCCCCeEEE
Q psy4393 92 TLKIWELSSGKCL-KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK-------C-LK---TLPAHSDPVSAV 159 (247)
Q Consensus 92 ~i~v~d~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~-------~-~~---~~~~~~~~i~~~ 159 (247)
.|.+=.+...... +.+++ .....+.|++|...+..+-.+|.++++|.+..- + +. .+......+..+
T Consensus 138 avIVGsvdGNRIwgKeLkg--~~l~hv~ws~D~~~~Lf~~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i 215 (1189)
T KOG2041|consen 138 AVIVGSVDGNRIWGKELKG--QLLAHVLWSEDLEQALFKKANGETHLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEI 215 (1189)
T ss_pred CEEEEeeccceecchhcch--heccceeecccHHHHHhhhcCCcEEEecccccHHHhhhhceEEeeeeeecCCCccccce
Confidence 9887666532211 12222 223467899999999989899999999976421 1 00 011111224444
Q ss_pred EE--------CCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcC
Q psy4393 160 HF--------NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD 217 (247)
Q Consensus 160 ~~--------~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d 217 (247)
.| -|+...|+++..+|.+.+-.-.+-.....+ .. .-.+....|+++|..|+.++.|
T Consensus 216 ~w~~g~~~~v~pdrP~lavcy~nGr~QiMR~eND~~Pvv~-dt-gm~~vgakWnh~G~vLAvcG~~ 279 (1189)
T KOG2041|consen 216 EWNTGPYQPVPPDRPRLAVCYANGRMQIMRSENDPEPVVV-DT-GMKIVGAKWNHNGAVLAVCGND 279 (1189)
T ss_pred eeccCccccCCCCCCEEEEEEcCceehhhhhcCCCCCeEE-ec-ccEeecceecCCCcEEEEccCc
Confidence 44 357889999999998877644332222111 11 1345678999999999998754
No 265
>PRK04043 tolB translocation protein TolB; Provisional
Probab=99.20 E-value=7.2e-08 Score=79.19 Aligned_cols=175 Identities=15% Similarity=0.086 Sum_probs=110.2
Q ss_pred eEEEEecCCCeEEEEEecccCCeEEEEECCCCCE-EEEEcC---CCeEEEEECCCceEEEEEecCCccEEEEEEcCCCCE
Q psy4393 50 LIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRL-LVSGSD---DKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNL 125 (247)
Q Consensus 50 ~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~---d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 125 (247)
.|.+-|.. +...+.+.... ......|+|||+. ++..+. +..|.++|+.+++.... ....+......|+|+|+.
T Consensus 170 ~l~~~d~d-g~~~~~~~~~~-~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~l-t~~~g~~~~~~~SPDG~~ 246 (419)
T PRK04043 170 NIVLADYT-LTYQKVIVKGG-LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKI-ASSQGMLVVSDVSKDGSK 246 (419)
T ss_pred eEEEECCC-CCceeEEccCC-CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEE-ecCCCcEEeeEECCCCCE
Confidence 44444443 33233333333 6778999999985 554333 35799999988765443 334444556789999987
Q ss_pred EEEe-eCC--CCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecC-CC--eEEEEeCCCceeeeeeccCCCCCe
Q psy4393 126 IVSG-SFD--ESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY-DG--LCRIWDTASGQCLKTLIDDDNPPV 199 (247)
Q Consensus 126 l~~~-~~d--~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-dg--~i~v~d~~~~~~~~~~~~~~~~~v 199 (247)
++.. +.+ ..|.++|+.++.. ..+..+........|+|||+.++..+. .+ .|.+.|+.+++..+...... .
T Consensus 247 la~~~~~~g~~~Iy~~dl~~g~~-~~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~rlt~~g~-~-- 322 (419)
T PRK04043 247 LLLTMAPKGQPDIYLYDTNTKTL-TQITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQVVFHGK-N-- 322 (419)
T ss_pred EEEEEccCCCcEEEEEECCCCcE-EEcccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeEeCccCCC-c--
Confidence 7654 323 4688889877753 344433333344589999987766553 33 67888888776543322211 1
Q ss_pred EEEEECCCCCEEEEEEcC---------CeEEEEECCCcceEE
Q psy4393 200 SFVKFSPNGKYILAATLD---------NTLKLWDSKVVTPAI 232 (247)
Q Consensus 200 ~~~~~s~~~~~l~~~~~d---------g~i~vwd~~~~~~~~ 232 (247)
...|+|||++|+..... ..|.+.|........
T Consensus 323 -~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~~~ 363 (419)
T PRK04043 323 -NSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYIRR 363 (419)
T ss_pred -CceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCeEE
Confidence 24899999999887653 368888887766543
No 266
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=99.19 E-value=1.4e-07 Score=72.72 Aligned_cols=197 Identities=13% Similarity=0.265 Sum_probs=129.0
Q ss_pred EEEEECCCCCEEEEEeCC-CeEEEEecCC-CeEEEE--EecccCC----------eEEEEECCCCCEEEEEcC-CCeEEE
Q psy4393 31 SSVKFSPNGEWLASSSAD-KLIKIWGAYD-GKFEKT--ISGHKLG----------ISDVAWSSDSRLLVSGSD-DKTLKI 95 (247)
Q Consensus 31 ~~~~~s~~~~~l~~~~~d-g~v~iw~~~~-~~~~~~--~~~~~~~----------v~~~~~~~~~~~l~~~~~-d~~i~v 95 (247)
+-++++++|++|+++... |.|.++-+.. |..... ...|..+ +....+.|+++++++... .-.|.+
T Consensus 92 ~yvsvd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~ 171 (346)
T COG2706 92 CYVSVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFL 171 (346)
T ss_pred eEEEECCCCCEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEE
Confidence 667888888888887654 6788887743 332221 2223333 788899999999887753 236889
Q ss_pred EECCCceEEE----EEecCCccEEEEEEcCCCCEEEEeeC-CCCEEEEECCCC-eEEEeecC---------CCCCeEEEE
Q psy4393 96 WELSSGKCLK----TLKGHSNYVFCCNFNPQSNLIVSGSF-DESVRIWDVRTG-KCLKTLPA---------HSDPVSAVH 160 (247)
Q Consensus 96 ~d~~~~~~~~----~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~v~d~~~~-~~~~~~~~---------~~~~i~~~~ 160 (247)
|++..+.... .++ ....-+.+.|+|++++.+..++ +++|-+|..... ..+..++. ......++.
T Consensus 172 y~~~dg~L~~~~~~~v~-~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIh 250 (346)
T COG2706 172 YDLDDGKLTPADPAEVK-PGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAIH 250 (346)
T ss_pred EEcccCccccccccccC-CCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCceeEEE
Confidence 9998765332 222 2233568899999999887664 788999988763 22222221 234567899
Q ss_pred ECCCCCEEEEecC-CCeEEEEeCCC--ceee-eeeccCCCCCeEEEEECCCCCEEEEEEcC-CeEEEEECCCc
Q psy4393 161 FNRDGSLIVSSSY-DGLCRIWDTAS--GQCL-KTLIDDDNPPVSFVKFSPNGKYILAATLD-NTLKLWDSKVV 228 (247)
Q Consensus 161 ~~~~~~~l~~~~~-dg~i~v~d~~~--~~~~-~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-g~i~vwd~~~~ 228 (247)
+++||++|+++.. ...|.+|.+.. ++.. ......+...-....|+++|++|+++.++ ..|.+|..+..
T Consensus 251 is~dGrFLYasNRg~dsI~~f~V~~~~g~L~~~~~~~teg~~PR~F~i~~~g~~Liaa~q~sd~i~vf~~d~~ 323 (346)
T COG2706 251 ISPDGRFLYASNRGHDSIAVFSVDPDGGKLELVGITPTEGQFPRDFNINPSGRFLIAANQKSDNITVFERDKE 323 (346)
T ss_pred ECCCCCEEEEecCCCCeEEEEEEcCCCCEEEEEEEeccCCcCCccceeCCCCCEEEEEccCCCcEEEEEEcCC
Confidence 9999999988753 23677776543 3321 11112222223567899999999999876 47999976544
No 267
>KOG1409|consensus
Probab=99.19 E-value=5.4e-09 Score=79.85 Aligned_cols=158 Identities=22% Similarity=0.416 Sum_probs=113.9
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCeEEEEecCC----CeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEE--------
Q psy4393 27 TKAVSSVKFSPNGEWLASSSADKLIKIWGAYD----GKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLK-------- 94 (247)
Q Consensus 27 ~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~-------- 94 (247)
..+++++.+.+....|+.|-.+|.+.-+.... ....+....|...+..+.|+.....+++++.|..+.
T Consensus 68 P~~~~~~~y~~e~~~L~vg~~ngtvtefs~sedfnkm~~~r~~~~h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~ 147 (404)
T KOG1409|consen 68 PSPCSAMEYVSESRRLYVGQDNGTVTEFALSEDFNKMTFLKDYLAHQARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGN 147 (404)
T ss_pred CCCceEeeeeccceEEEEEEecceEEEEEhhhhhhhcchhhhhhhhhcceeeEEecCCceeEEEeccccceEEEeeccCC
Confidence 47789999999999999999999998876532 122233345566666666666555666555543321
Q ss_pred -------------------------------EEEC--CCceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECC
Q psy4393 95 -------------------------------IWEL--SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141 (247)
Q Consensus 95 -------------------------------v~d~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~ 141 (247)
+..+ ..-..+..+.+|.+.+.+..|.+...++.+|..|..+.+||+-
T Consensus 148 ~lg~Y~~~~~~t~~~~d~~~~fvGd~~gqvt~lr~~~~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdig 227 (404)
T KOG1409|consen 148 RLGGYNFETPASALQFDALYAFVGDHSGQITMLKLEQNGCQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIG 227 (404)
T ss_pred cccceEeeccCCCCceeeEEEEecccccceEEEEEeecCCceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEecc
Confidence 1111 1112345567888999999999999999999999999999997
Q ss_pred CCeE-EEeecCCCCCeEEEEECCCCCEEEEecCCCeEEEEeCCC
Q psy4393 142 TGKC-LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 184 (247)
Q Consensus 142 ~~~~-~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~ 184 (247)
..+- ......|...+..+...+.-+.+.+++.||.|.+||...
T Consensus 228 g~~g~~~el~gh~~kV~~l~~~~~t~~l~S~~edg~i~~w~mn~ 271 (404)
T KOG1409|consen 228 GRKGTAYELQGHNDKVQALSYAQHTRQLISCGEDGGIVVWNMNV 271 (404)
T ss_pred CCcceeeeeccchhhhhhhhhhhhheeeeeccCCCeEEEEeccc
Confidence 5443 345667777788877777778899999999999998764
No 268
>KOG4714|consensus
Probab=99.18 E-value=4e-10 Score=82.84 Aligned_cols=159 Identities=19% Similarity=0.232 Sum_probs=99.3
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCe-EEEEEecccCCeEEEEECCCCCEEEEEcCCC------eEEEEE
Q psy4393 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-FEKTISGHKLGISDVAWSSDSRLLVSGSDDK------TLKIWE 97 (247)
Q Consensus 25 ~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~------~i~v~d 97 (247)
.|.++-.+-+.+-.++.+++++.||.+.+.+.+.-. ....+......-.+......++.+.++ .-| ..+.|+
T Consensus 87 ~~sep~p~~~~s~~~t~V~~~~~dg~~~v~s~~~~~~~~~~i~~~~~~~as~~~~~~~~~i~s~-~~g~~n~~d~~~a~~ 165 (319)
T KOG4714|consen 87 KNSEIDPNDACTMTDNRVCIGYADGSLAVFSTDKDLALMSRIPSIHSGSASRKICRHGNSILSG-GCGNWNAQDNFYANT 165 (319)
T ss_pred ccCCCCCcccccccCCceEecCCCceEEEEechHHHhhhhhcccccccccccceeecccEEecC-CcceEeeccceeeec
Confidence 455444444455556778999999999999875411 111111111111222333444544433 223 334455
Q ss_pred CCCceEEEEEecCCccEEEEEEcCC-CCEEEEeeCCCCEEEEECCCCeEE-EeecCCCCCeEEEEECC-CCCEEEEecCC
Q psy4393 98 LSSGKCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVRTGKCL-KTLPAHSDPVSAVHFNR-DGSLIVSSSYD 174 (247)
Q Consensus 98 ~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~v~d~~~~~~~-~~~~~~~~~i~~~~~~~-~~~~l~~~~~d 174 (247)
++..+....-+.....|.+++-+|. .+++++|+.||.+.+||.+..... ..+++|+.++..+.|+| ++..|+++++|
T Consensus 166 ~~p~~t~~~~~~~~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sed 245 (319)
T KOG4714|consen 166 LDPIKTLIPSKKALDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSED 245 (319)
T ss_pred ccccccccccccccccchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecCC
Confidence 5433222111112233778888884 456778889999999999987543 34678999999999999 56789999999
Q ss_pred CeEEEEeCCC
Q psy4393 175 GLCRIWDTAS 184 (247)
Q Consensus 175 g~i~v~d~~~ 184 (247)
|.+.-||..+
T Consensus 246 Gslw~wdas~ 255 (319)
T KOG4714|consen 246 GSLWHWDAST 255 (319)
T ss_pred CcEEEEcCCC
Confidence 9999999875
No 269
>KOG1275|consensus
Probab=99.17 E-value=2.2e-09 Score=91.28 Aligned_cols=178 Identities=19% Similarity=0.286 Sum_probs=130.0
Q ss_pred EEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceEEEEEecCCccEEEEEEcC
Q psy4393 42 LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNP 121 (247)
Q Consensus 42 l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~ 121 (247)
++-|+-...+..+|..+.+..+...-...+|.-+ ..+++.+.+|...|+|.+-|.++.+.++++.+|.+.+.. |+-
T Consensus 150 ~i~Gg~Q~~li~~Dl~~~~e~r~~~v~a~~v~im--R~Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~siSD--fDv 225 (1118)
T KOG1275|consen 150 LIMGGLQEKLIHIDLNTEKETRTTNVSASGVTIM--RYNNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGSISD--FDV 225 (1118)
T ss_pred eeecchhhheeeeecccceeeeeeeccCCceEEE--EecCcEEEeecccceEEeecCCcCceeeeeeccccceee--eec
Confidence 4444444555566665555444443333345433 446788999999999999999999999999999998865 566
Q ss_pred CCCEEEEeeC---------CCCEEEEECCCCeEEEeecCCCCCeEEEEECCCC-CEEEEecCCCeEEEEeC---CCceee
Q psy4393 122 QSNLIVSGSF---------DESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDG-SLIVSSSYDGLCRIWDT---ASGQCL 188 (247)
Q Consensus 122 ~~~~l~~~~~---------d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~v~d~---~~~~~~ 188 (247)
.|+++++++. |..|+|||+|.-+.+..+..+.++ .-+.|+|.- ..+++++..|+..+.|. .+...-
T Consensus 226 ~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~~P-~flrf~Psl~t~~~V~S~sGq~q~vd~~~lsNP~~~ 304 (1118)
T KOG1275|consen 226 QGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPYGP-QFLRFHPSLTTRLAVTSQSGQFQFVDTATLSNPPAG 304 (1118)
T ss_pred cCCeEEEeecccccccccccchhhhhhhhhhhccCCcccccCc-hhhhhcccccceEEEEecccceeeccccccCCCccc
Confidence 7899999875 445899999988777666665554 345777853 46888899999999983 333222
Q ss_pred eeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEE
Q psy4393 189 KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224 (247)
Q Consensus 189 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd 224 (247)
..........+..+.++++++.++.|..+|.|.+|-
T Consensus 305 ~~~v~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa 340 (1118)
T KOG1275|consen 305 VKMVNPNGSGISAFDISSNGDALAFGDHEGHVNLWA 340 (1118)
T ss_pred eeEEccCCCcceeEEecCCCceEEEecccCcEeeec
Confidence 222344455688999999999999999999999997
No 270
>KOG3914|consensus
Probab=99.16 E-value=8.6e-10 Score=85.54 Aligned_cols=160 Identities=19% Similarity=0.328 Sum_probs=110.2
Q ss_pred eEEEEECCCCCEEEEEeCCCeEEEEecCCCeE---EEEEecccCCeEEEEECCCCCEEEEEcCC---CeEEEEECCCceE
Q psy4393 30 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKF---EKTISGHKLGISDVAWSSDSRLLVSGSDD---KTLKIWELSSGKC 103 (247)
Q Consensus 30 v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~v~d~~~~~~ 103 (247)
+.....++.+++||.+..+....+++...... ..........-+.+.+..+......+... ..+.+|....+..
T Consensus 65 ~~~~~~s~~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~v~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~~~~ 144 (390)
T KOG3914|consen 65 PALVLTSDSGRLVAVATSSKQRAVFDYRENPKGAKLLDVSCVPKRPTAISFIREDTSVLVADKAGDVYSFDILSADSGRC 144 (390)
T ss_pred ccccccCCCceEEEEEeCCCceEEEEEecCCCcceeeeEeecccCcceeeeeeccceEEEEeecCCceeeeeecccccCc
Confidence 44556778889999888777766666543322 11111222334455555554544444444 4455555544333
Q ss_pred EEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeec-CCCCCeEEEEECCCCCEEEEecCCCeEEEEeC
Q psy4393 104 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLP-AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 182 (247)
Q Consensus 104 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~ 182 (247)
..+-+|.+.+..++++||.++++++..|..|++-....--.+..+- +|...|..++..++. .|++++.|+++++||.
T Consensus 145 -~~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~~~-~LlS~sGD~tlr~Wd~ 222 (390)
T KOG3914|consen 145 -EPILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTDNY-LLLSGSGDKTLRLWDI 222 (390)
T ss_pred -chhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhheeeeeeccCc-eeeecCCCCcEEEEec
Confidence 3455788889999999999999999999999998876655555544 588899999987654 5899999999999999
Q ss_pred CCceeeeee
Q psy4393 183 ASGQCLKTL 191 (247)
Q Consensus 183 ~~~~~~~~~ 191 (247)
.+++.+..+
T Consensus 223 ~sgk~L~t~ 231 (390)
T KOG3914|consen 223 TSGKLLDTC 231 (390)
T ss_pred ccCCccccc
Confidence 999876443
No 271
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=99.15 E-value=1.2e-07 Score=75.72 Aligned_cols=120 Identities=20% Similarity=0.252 Sum_probs=98.4
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCC-eEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceE
Q psy4393 25 GHTKAVSSVKFSPNGEWLASSSADK-LIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKC 103 (247)
Q Consensus 25 ~h~~~v~~~~~s~~~~~l~~~~~dg-~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~ 103 (247)
+|.+.|.=..+.-+++.++.|..|| .+-|+|..+++. ..+...-+.|.++..+++|+.++++.....+.+.|+.++..
T Consensus 357 ~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e~-kr~e~~lg~I~av~vs~dGK~~vvaNdr~el~vididngnv 435 (668)
T COG4946 357 GKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGEV-KRIEKDLGNIEAVKVSPDGKKVVVANDRFELWVIDIDNGNV 435 (668)
T ss_pred CCCCceEEEEEccCCcceEEeccCCceEEEEecCCceE-EEeeCCccceEEEEEcCCCcEEEEEcCceEEEEEEecCCCe
Confidence 5677788888888888889999998 899999877654 44455567799999999999999999889999999999986
Q ss_pred EEEEecCCccEEEEEEcCCCCEEEEeeCCC----CEEEEECCCCeE
Q psy4393 104 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDE----SVRIWDVRTGKC 145 (247)
Q Consensus 104 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~----~i~v~d~~~~~~ 145 (247)
...-+...+.|....|+|++.++|.+--+| .|+++|+..++.
T Consensus 436 ~~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~Ki 481 (668)
T COG4946 436 RLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKI 481 (668)
T ss_pred eEecccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCeE
Confidence 554455567789999999999999887665 588999876543
No 272
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=99.15 E-value=1.5e-07 Score=70.59 Aligned_cols=198 Identities=17% Similarity=0.281 Sum_probs=123.4
Q ss_pred EEECCCCCEEEEEeCCCeEEEEecCCCe--EEE--EEeccc-CCeEEEEECCCCCEEEEEcCCCeEEEEECCCceEEEEE
Q psy4393 33 VKFSPNGEWLASSSADKLIKIWGAYDGK--FEK--TISGHK-LGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTL 107 (247)
Q Consensus 33 ~~~s~~~~~l~~~~~dg~v~iw~~~~~~--~~~--~~~~~~-~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~ 107 (247)
++.+.+|+.||.- .|..|.|....+.- ... .+.... ..=+.++|+||+..+|.+...|+|+++|+.... +..+
T Consensus 3 ~~~~~~Gk~lAi~-qd~~iEiRsa~Ddf~si~~kcqVpkD~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~g~~-lf~I 80 (282)
T PF15492_consen 3 LALSSDGKLLAIL-QDQCIEIRSAKDDFSSIIGKCQVPKDPNPQWRKLAWSPDCTLLAYAESTGTIRVFDLMGSE-LFVI 80 (282)
T ss_pred eeecCCCcEEEEE-eccEEEEEeccCCchheeEEEecCCCCCchheEEEECCCCcEEEEEcCCCeEEEEecccce-eEEc
Confidence 4667899988874 57788888765431 112 222222 235678999999999999999999999987533 2233
Q ss_pred ecC-------CccEEEEEEcCCC------CEEEEeeCCCCEEEEECCCC-----eEEE--eecC-CCCCeEEEEECCCCC
Q psy4393 108 KGH-------SNYVFCCNFNPQS------NLIVSGSFDESVRIWDVRTG-----KCLK--TLPA-HSDPVSAVHFNRDGS 166 (247)
Q Consensus 108 ~~~-------~~~v~~~~~~~~~------~~l~~~~~d~~i~v~d~~~~-----~~~~--~~~~-~~~~i~~~~~~~~~~ 166 (247)
... ...|..+.|.+.. ..++.-.-.|.++=|-+..+ +... .+.. +...|.++.++|..+
T Consensus 81 ~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~h~ 160 (282)
T PF15492_consen 81 PPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQGYQENHSFSFSSHYPHGINSAVYHPKHR 160 (282)
T ss_pred CcccccCCccccceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCCcceeeEEEEecccCCCceeEEEEcCCCC
Confidence 211 2345555554321 23444455666665544221 2222 2333 356899999999988
Q ss_pred EEEEecCC----C-------eEEEEeCCCceeeee--------------------e--------ccCCCCCeEEEEECCC
Q psy4393 167 LIVSSSYD----G-------LCRIWDTASGQCLKT--------------------L--------IDDDNPPVSFVKFSPN 207 (247)
Q Consensus 167 ~l~~~~~d----g-------~i~v~d~~~~~~~~~--------------------~--------~~~~~~~v~~~~~s~~ 207 (247)
+|++|+.. + -+..|.+-++.+... + .......|..+..|||
T Consensus 161 LLlVgG~~~~~~~~s~a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~~~~~~~~~~~~~~~~~fs~~~~~~d~i~kmSlSPd 240 (282)
T PF15492_consen 161 LLLVGGCEQNQDGMSKASSCGLTAWRILSDSPYYKQVTSSEDDITASSKRRGLLRIPSFKFFSRQGQEQDGIFKMSLSPD 240 (282)
T ss_pred EEEEeccCCCCCccccccccCceEEEEcCCCCcEEEccccCccccccccccceeeccceeeeeccccCCCceEEEEECCC
Confidence 88877632 1 255665543211000 0 1123456778999999
Q ss_pred CCEEEEEEcCCeEEEEECCCcceEE
Q psy4393 208 GKYILAATLDNTLKLWDSKVVTPAI 232 (247)
Q Consensus 208 ~~~l~~~~~dg~i~vwd~~~~~~~~ 232 (247)
|+.||+...+|.|.+|++-...++.
T Consensus 241 g~~La~ih~sG~lsLW~iPsL~~~~ 265 (282)
T PF15492_consen 241 GSLLACIHFSGSLSLWEIPSLRLQR 265 (282)
T ss_pred CCEEEEEEcCCeEEEEecCcchhhc
Confidence 9999999999999999987655443
No 273
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=99.15 E-value=2.6e-08 Score=88.86 Aligned_cols=195 Identities=18% Similarity=0.317 Sum_probs=127.3
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCeEEEEecC------------C-----------CeEEEEEec----------------
Q psy4393 27 TKAVSSVKFSPNGEWLASSSADKLIKIWGAY------------D-----------GKFEKTISG---------------- 67 (247)
Q Consensus 27 ~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~------------~-----------~~~~~~~~~---------------- 67 (247)
..+|.+++||||++.|+..+.++.+.+.+.. + |+....+.|
T Consensus 120 d~GI~a~~WSPD~Ella~vT~~~~l~~mt~~fd~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~ 199 (928)
T PF04762_consen 120 DSGILAASWSPDEELLALVTGEGNLLLMTRDFDPISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVP 199 (928)
T ss_pred cCcEEEEEECCCcCEEEEEeCCCEEEEEeccceEEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCCC
Confidence 5789999999999999998888888776421 0 011111110
Q ss_pred --------ccCCeEEEEECCCCCEEEEEcC------CCeEEEEECCCceEEEEEecCCccEEEEEEcCCCCEEEEeeC--
Q psy4393 68 --------HKLGISDVAWSSDSRLLVSGSD------DKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF-- 131 (247)
Q Consensus 68 --------~~~~v~~~~~~~~~~~l~~~~~------d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-- 131 (247)
....-..++|..||+++++.+- -..+++|+-+ |........-.+--.+++|.|.|++||+.-.
T Consensus 200 ~~d~~~~s~dd~~~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~Re-G~L~stSE~v~gLe~~l~WrPsG~lIA~~q~~~ 278 (928)
T PF04762_consen 200 KVDEGKLSWDDGRVRISWRGDGEYFAVSSVEPETGSRRVIRVYSRE-GELQSTSEPVDGLEGALSWRPSGNLIASSQRLP 278 (928)
T ss_pred ccccCccccCCCceEEEECCCCcEEEEEEEEcCCCceeEEEEECCC-ceEEeccccCCCccCCccCCCCCCEEEEEEEcC
Confidence 1223456899999999987654 2579999965 5533332222333456899999999998754
Q ss_pred -CCCEEEEECCCCeEEEee----cCCCCCeEEEEECCCCCEEEEecCCCeEEEEeCCCcee--eeeeccCCCCCeEEEEE
Q psy4393 132 -DESVRIWDVRTGKCLKTL----PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC--LKTLIDDDNPPVSFVKF 204 (247)
Q Consensus 132 -d~~i~v~d~~~~~~~~~~----~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~--~~~~~~~~~~~v~~~~~ 204 (247)
...|.+|+- +|..-..| ......+..+.|++|+..||....|. |.+|-..+... ++.+.......+..+.|
T Consensus 279 ~~~~VvFfEr-NGLrhgeF~l~~~~~~~~v~~l~Wn~ds~iLAv~~~~~-vqLWt~~NYHWYLKqei~~~~~~~~~~~~W 356 (928)
T PF04762_consen 279 DRHDVVFFER-NGLRHGEFTLRFDPEEEKVIELAWNSDSEILAVWLEDR-VQLWTRSNYHWYLKQEIRFSSSESVNFVKW 356 (928)
T ss_pred CCcEEEEEec-CCcEeeeEecCCCCCCceeeEEEECCCCCEEEEEecCC-ceEEEeeCCEEEEEEEEEccCCCCCCceEE
Confidence 234667763 34322222 23356789999999999999877555 99998887642 33333333444555899
Q ss_pred CCCCC-EEEEEEcCCeEEEEE
Q psy4393 205 SPNGK-YILAATLDNTLKLWD 224 (247)
Q Consensus 205 s~~~~-~l~~~~~dg~i~vwd 224 (247)
+|... .|...+.+|.+..++
T Consensus 357 dpe~p~~L~v~t~~g~~~~~~ 377 (928)
T PF04762_consen 357 DPEKPLRLHVLTSNGQYEIYD 377 (928)
T ss_pred CCCCCCEEEEEecCCcEEEEE
Confidence 99654 566677667776655
No 274
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=99.13 E-value=5e-07 Score=69.81 Aligned_cols=203 Identities=12% Similarity=0.219 Sum_probs=133.5
Q ss_pred CCCCeEEEEECCCCCEEEEEeCC---CeEEEEecCC--CeEEEE--EecccCCeEEEEECCCCCEEEEEcC-CCeEEEEE
Q psy4393 26 HTKAVSSVKFSPNGEWLASSSAD---KLIKIWGAYD--GKFEKT--ISGHKLGISDVAWSSDSRLLVSGSD-DKTLKIWE 97 (247)
Q Consensus 26 h~~~v~~~~~s~~~~~l~~~~~d---g~v~iw~~~~--~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~v~d 97 (247)
+.+..+=++|+|++++|.++.++ |.|.-|.+.. |+.... ......+-.-++++++|++++++.- .|.|.++-
T Consensus 38 ~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yvsvd~~g~~vf~AnY~~g~v~v~p 117 (346)
T COG2706 38 ELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYVSVDEDGRFVFVANYHSGSVSVYP 117 (346)
T ss_pred ccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEEEECCCCCEEEEEEccCceEEEEE
Confidence 45667789999999999887654 6676666653 444322 2222333467899999999988764 57899998
Q ss_pred CCC-ceEEEE--EecCCcc----------EEEEEEcCCCCEEEEee-CCCCEEEEECCCCeEEE----eecCCCCCeEEE
Q psy4393 98 LSS-GKCLKT--LKGHSNY----------VFCCNFNPQSNLIVSGS-FDESVRIWDVRTGKCLK----TLPAHSDPVSAV 159 (247)
Q Consensus 98 ~~~-~~~~~~--~~~~~~~----------v~~~~~~~~~~~l~~~~-~d~~i~v~d~~~~~~~~----~~~~~~~~i~~~ 159 (247)
++. |..... +..|.+. +....+.|+++++++.. ....|.+|++..+.... .++.. ..-+-|
T Consensus 118 ~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~~~dg~L~~~~~~~v~~G-~GPRHi 196 (346)
T COG2706 118 LQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFLYDLDDGKLTPADPAEVKPG-AGPRHI 196 (346)
T ss_pred cccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEEEEcccCccccccccccCCC-CCcceE
Confidence 865 322111 1112222 67788999999888764 34579999998765322 22333 345779
Q ss_pred EECCCCCEEEEec-CCCeEEEEeCCCc--e--eeeee---cc--CCCCCeEEEEECCCCCEEEEEEc-CCeEEEEECCCc
Q psy4393 160 HFNRDGSLIVSSS-YDGLCRIWDTASG--Q--CLKTL---ID--DDNPPVSFVKFSPNGKYILAATL-DNTLKLWDSKVV 228 (247)
Q Consensus 160 ~~~~~~~~l~~~~-~dg~i~v~d~~~~--~--~~~~~---~~--~~~~~v~~~~~s~~~~~l~~~~~-dg~i~vwd~~~~ 228 (247)
.|+|++++.+... .+++|.+|..... + .++.. .. ........+..++||++|+++.. ...|.+|.....
T Consensus 197 ~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFLYasNRg~dsI~~f~V~~~ 276 (346)
T COG2706 197 VFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAIHISPDGRFLYASNRGHDSIAVFSVDPD 276 (346)
T ss_pred EEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCceeEEEECCCCCEEEEecCCCCeEEEEEEcCC
Confidence 9999999876554 5889999987663 2 11211 11 12234567889999999998864 358888877654
Q ss_pred c
Q psy4393 229 T 229 (247)
Q Consensus 229 ~ 229 (247)
.
T Consensus 277 ~ 277 (346)
T COG2706 277 G 277 (346)
T ss_pred C
Confidence 3
No 275
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=99.11 E-value=1.4e-06 Score=69.26 Aligned_cols=187 Identities=12% Similarity=0.139 Sum_probs=123.2
Q ss_pred CeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcC----------CCeEEEEECCCceEEEEEecCCc------
Q psy4393 49 KLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSD----------DKTLKIWELSSGKCLKTLKGHSN------ 112 (247)
Q Consensus 49 g~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----------d~~i~v~d~~~~~~~~~~~~~~~------ 112 (247)
+.|.+.|..+.+.+..+.....+- .+ ++||++.++++.. +..|.+||..+.+.+..+.....
T Consensus 27 ~~v~ViD~~~~~v~g~i~~G~~P~-~~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~ 104 (352)
T TIGR02658 27 TQVYTIDGEAGRVLGMTDGGFLPN-PV-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLVG 104 (352)
T ss_pred ceEEEEECCCCEEEEEEEccCCCc-ee-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhcc
Confidence 789999999988888877544443 24 9999998876654 77999999999998877763222
Q ss_pred -cEEEEEEcCCCCEEEEeeC--CCCEEEEECCCCeEEEeecCCCC-------------------------------CeEE
Q psy4393 113 -YVFCCNFNPQSNLIVSGSF--DESVRIWDVRTGKCLKTLPAHSD-------------------------------PVSA 158 (247)
Q Consensus 113 -~v~~~~~~~~~~~l~~~~~--d~~i~v~d~~~~~~~~~~~~~~~-------------------------------~i~~ 158 (247)
.-....++|+|++++.... +..+.+.|+.+++.+..+..... ....
T Consensus 105 ~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~vp~~~~vy~t~e~~~~~~~~Dg~~~~v~~d~~g~~~~~~ 184 (352)
T TIGR02658 105 TYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDVPDCYHIFPTANDTFFMHCRDGSLAKVGYGTKGNPKIKP 184 (352)
T ss_pred CccceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEeCCCCcEEEEecCCccEEEeecCceEEEEecCCCceEEee
Confidence 1235789999999987763 67899999988766544322110 0001
Q ss_pred E--------------EECC-CCCEEEEecCCCeEEEEeCCCce-----eeeeeccC------CCCCeEEEEECCCCCEEE
Q psy4393 159 V--------------HFNR-DGSLIVSSSYDGLCRIWDTASGQ-----CLKTLIDD------DNPPVSFVKFSPNGKYIL 212 (247)
Q Consensus 159 ~--------------~~~~-~~~~l~~~~~dg~i~v~d~~~~~-----~~~~~~~~------~~~~v~~~~~s~~~~~l~ 212 (247)
. .+.+ +|+++.+..+ |.|.+.|+...+ ....+... ....+.-++++++++.++
T Consensus 185 ~~vf~~~~~~v~~rP~~~~~dg~~~~vs~e-G~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~ly 263 (352)
T TIGR02658 185 TEVFHPEDEYLINHPAYSNKSGRLVWPTYT-GKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIY 263 (352)
T ss_pred eeeecCCccccccCCceEcCCCcEEEEecC-CeEEEEecCCCcceecceeeeccccccccccCCCcceeEEEcCCCCEEE
Confidence 0 1123 6776666655 999999964432 12211111 112234489999999888
Q ss_pred EEE----------cCCeEEEEECCCcceEEEEccCC
Q psy4393 213 AAT----------LDNTLKLWDSKVVTPAIICSTPL 238 (247)
Q Consensus 213 ~~~----------~dg~i~vwd~~~~~~~~~~~~~~ 238 (247)
... ..+.|.++|..+.+.+..+....
T Consensus 264 V~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i~vG~ 299 (352)
T TIGR02658 264 LLADQRAKWTHKTASRFLFVVDAKTGKRLRKIELGH 299 (352)
T ss_pred EEecCCccccccCCCCEEEEEECCCCeEEEEEeCCC
Confidence 743 22589999998887666554433
No 276
>KOG1064|consensus
Probab=99.10 E-value=1.1e-09 Score=98.90 Aligned_cols=161 Identities=15% Similarity=0.253 Sum_probs=125.6
Q ss_pred ccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceEEEEEe-cCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEE
Q psy4393 68 HKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLK-GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCL 146 (247)
Q Consensus 68 ~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~ 146 (247)
+-..|.++.=+|...+.++|+.||.+++|....++.+..++ .....+..+.|+.+|+.+..+..||.+.+|... .++.
T Consensus 2207 ~v~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~-pk~~ 2285 (2439)
T KOG1064|consen 2207 PVENVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQVVCFRTAGNSRVTRSRFNHQGNKFGIVDGDGDLSLWQAS-PKPY 2285 (2439)
T ss_pred ccCceeeecCCCCCceEEecCCCceEEEEeccCCCeEEEeeccCcchhhhhhhcccCCceeeeccCCceeecccC-Ccce
Confidence 34457778778888899999999999999998887666554 233778889999999999999999999999987 5666
Q ss_pred EeecCCCCCeEEEEECCCCCEEEEec---CCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEE
Q psy4393 147 KTLPAHSDPVSAVHFNRDGSLIVSSS---YDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 223 (247)
Q Consensus 147 ~~~~~~~~~i~~~~~~~~~~~l~~~~---~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw 223 (247)
...+.|........|-. ..+++++ .++.+.+||.--.....-....|....+++++-|..+.|++|+.+|.|++|
T Consensus 2286 ~s~qchnk~~~Df~Fi~--s~~~tag~s~d~~n~~lwDtl~~~~~s~v~~~H~~gaT~l~~~P~~qllisggr~G~v~l~ 2363 (2439)
T KOG1064|consen 2286 TSWQCHNKALSDFRFIG--SLLATAGRSSDNRNVCLWDTLLPPMNSLVHTCHDGGATVLAYAPKHQLLISGGRKGEVCLF 2363 (2439)
T ss_pred eccccCCccccceeeee--hhhhccccCCCCCcccchhcccCcccceeeeecCCCceEEEEcCcceEEEecCCcCcEEEe
Confidence 77778887777777754 5566654 356899999643322111123455678999999999999999999999999
Q ss_pred ECCCcceE
Q psy4393 224 DSKVVTPA 231 (247)
Q Consensus 224 d~~~~~~~ 231 (247)
|+++.+.+
T Consensus 2364 D~rqrql~ 2371 (2439)
T KOG1064|consen 2364 DIRQRQLR 2371 (2439)
T ss_pred ehHHHHHH
Confidence 99876543
No 277
>KOG4532|consensus
Probab=99.10 E-value=1.1e-07 Score=70.66 Aligned_cols=199 Identities=14% Similarity=0.082 Sum_probs=129.2
Q ss_pred EEEEECCCC-----CEEEEEeCCCeEEEEecCCCeE-EEEEecccCCeEEEEE-CCCCCEEEEEcCCCeEEEEECCCceE
Q psy4393 31 SSVKFSPNG-----EWLASSSADKLIKIWGAYDGKF-EKTISGHKLGISDVAW-SSDSRLLVSGSDDKTLKIWELSSGKC 103 (247)
Q Consensus 31 ~~~~~s~~~-----~~l~~~~~dg~v~iw~~~~~~~-~~~~~~~~~~v~~~~~-~~~~~~l~~~~~d~~i~v~d~~~~~~ 103 (247)
+.+.|-|.. .+||.|+..|...+|...+... ......+...|+-..= +-..-.+..++.|.++++.+++.+..
T Consensus 71 ~g~~F~p~s~~~kc~~la~gG~~g~fd~~~~~tn~~h~~~cd~snn~v~~~~r~cd~~~~~~i~sndht~k~~~~~~~s~ 150 (344)
T KOG4532|consen 71 TGMTFTPGSFINKCVTLADGGASGQFDLFACNTNDGHLYQCDVSNNDVTLVKRYCDLKFPLNIASNDHTGKTMVVSGDSN 150 (344)
T ss_pred ecccccchHhhccccEEEeccccceeeeecccCcccceeeecccccchhhhhhhcccccceeeccCCcceeEEEEecCcc
Confidence 346676632 3688888999999998764332 2222222222221111 11122356677888888888765432
Q ss_pred EEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeE-E-E-eecCCCCCeEEEEECCCCCEEEEecCCCeEEEE
Q psy4393 104 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC-L-K-TLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 180 (247)
Q Consensus 104 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~-~-~-~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~ 180 (247)
...+....-.+..+.++++++++++.+....|-.|.+..... + . ........-.+..|+.....+|++..||.+.||
T Consensus 151 ~~~~h~~~~~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~ 230 (344)
T KOG4532|consen 151 KFAVHNQNLTQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDLQFAVVFQDGTCAIY 230 (344)
T ss_pred cceeeccccceeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeeccCcceEEEEecCCcEEEE
Confidence 222221112377889999999999999999999998865432 2 2 122223334567899999999999999999999
Q ss_pred eCCCceeeee----eccCCCCCeEEEEECCCCC--EEEEEEcCCeEEEEECCCcc
Q psy4393 181 DTASGQCLKT----LIDDDNPPVSFVKFSPNGK--YILAATLDNTLKLWDSKVVT 229 (247)
Q Consensus 181 d~~~~~~~~~----~~~~~~~~v~~~~~s~~~~--~l~~~~~dg~i~vwd~~~~~ 229 (247)
|++.-..... -..++.+.+..+.|++-|. +|...-.-+.+.|-|.++..
T Consensus 231 DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~ 285 (344)
T KOG4532|consen 231 DVRNMATPMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYV 285 (344)
T ss_pred EecccccchhhhcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcccCc
Confidence 9987543221 1234678899999998664 55555566899999998864
No 278
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=99.10 E-value=6.6e-07 Score=68.93 Aligned_cols=201 Identities=15% Similarity=0.201 Sum_probs=133.1
Q ss_pred EEEEECC-CCCEEEEEeCCCe-EEEEecCCCeEEEEEecccCCeE--EEEECCCCCEEEEEcC-----CCeEEEEECC-C
Q psy4393 31 SSVKFSP-NGEWLASSSADKL-IKIWGAYDGKFEKTISGHKLGIS--DVAWSSDSRLLVSGSD-----DKTLKIWELS-S 100 (247)
Q Consensus 31 ~~~~~s~-~~~~l~~~~~dg~-v~iw~~~~~~~~~~~~~~~~~v~--~~~~~~~~~~l~~~~~-----d~~i~v~d~~-~ 100 (247)
..++.+| .+..++.+-.-|. ..+||..++.....+......-. --.|++||++|++.-. .|.|-|||.. +
T Consensus 8 H~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~~~ 87 (305)
T PF07433_consen 8 HGVAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAARG 87 (305)
T ss_pred cceeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECcCC
Confidence 3678888 4555666777664 67889988887766654332211 1369999999988754 4789999998 5
Q ss_pred ceEEEEEecCCccEEEEEEcCCCCEEEEeeC------------------CCCEEEEECCCCeEEEeec----CCCCCeEE
Q psy4393 101 GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF------------------DESVRIWDVRTGKCLKTLP----AHSDPVSA 158 (247)
Q Consensus 101 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------------------d~~i~v~d~~~~~~~~~~~----~~~~~i~~ 158 (247)
.+.+..+..+.-.-..+.+.|++..|+.+.. +..+.+.|..+|+.+.... .|..++.-
T Consensus 88 ~~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~~~~lSiRH 167 (305)
T PF07433_consen 88 YRRIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQVELPPDLHQLSIRH 167 (305)
T ss_pred cEEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeeeecCccccccceee
Confidence 5666666655444456778999976666532 2246677788888776633 36668999
Q ss_pred EEECCCCCEEEEecCCCe-------EEEEeCCCceeeeeecc------CCCCCeEEEEECCCCCEEEEEEc-CCeEEEEE
Q psy4393 159 VHFNRDGSLIVSSSYDGL-------CRIWDTASGQCLKTLID------DDNPPVSFVKFSPNGKYILAATL-DNTLKLWD 224 (247)
Q Consensus 159 ~~~~~~~~~l~~~~~dg~-------i~v~d~~~~~~~~~~~~------~~~~~v~~~~~s~~~~~l~~~~~-dg~i~vwd 224 (247)
+++.++|..++..-..|. +-+++... .+..+.. .-..-+-++++++++.++++++. .|.+.+||
T Consensus 168 La~~~~G~V~~a~Q~qg~~~~~~PLva~~~~g~--~~~~~~~p~~~~~~l~~Y~gSIa~~~~g~~ia~tsPrGg~~~~~d 245 (305)
T PF07433_consen 168 LAVDGDGTVAFAMQYQGDPGDAPPLVALHRRGG--ALRLLPAPEEQWRRLNGYIGSIAADRDGRLIAVTSPRGGRVAVWD 245 (305)
T ss_pred EEecCCCcEEEEEecCCCCCccCCeEEEEcCCC--cceeccCChHHHHhhCCceEEEEEeCCCCEEEEECCCCCEEEEEE
Confidence 999999987766544442 33333222 1111111 11234678999999999987775 67999999
Q ss_pred CCCcceEEE
Q psy4393 225 SKVVTPAII 233 (247)
Q Consensus 225 ~~~~~~~~~ 233 (247)
..++..+..
T Consensus 246 ~~tg~~~~~ 254 (305)
T PF07433_consen 246 AATGRLLGS 254 (305)
T ss_pred CCCCCEeec
Confidence 888765544
No 279
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=99.10 E-value=3.7e-09 Score=79.91 Aligned_cols=207 Identities=21% Similarity=0.410 Sum_probs=135.9
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCe-E----EEEEeccc------------CCeEEEEECCCCC--EEEEE
Q psy4393 27 TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-F----EKTISGHK------------LGISDVAWSSDSR--LLVSG 87 (247)
Q Consensus 27 ~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~-~----~~~~~~~~------------~~v~~~~~~~~~~--~l~~~ 87 (247)
..-|+++.|...|.+|++|...|.|.+|.-.... + ...+++|. ..|..+.|..++. .++..
T Consensus 26 ad~ItaVefd~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFLls 105 (460)
T COG5170 26 ADKITAVEFDETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFLLS 105 (460)
T ss_pred cceeeEEEeccccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEEEe
Confidence 4668999999999999999999999998754322 1 11233332 2467788876543 46777
Q ss_pred cCCCeEEEEECCCce-------------------EE--------EEE----------------ecCCccEEEEEEcCCCC
Q psy4393 88 SDDKTLKIWELSSGK-------------------CL--------KTL----------------KGHSNYVFCCNFNPQSN 124 (247)
Q Consensus 88 ~~d~~i~v~d~~~~~-------------------~~--------~~~----------------~~~~~~v~~~~~~~~~~ 124 (247)
+.|.+|++|.+.... ++ ..+ ..|.-.+.++.++.+..
T Consensus 106 tNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSiS~NsD~e 185 (460)
T COG5170 106 TNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSISFNSDKE 185 (460)
T ss_pred cCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeeeeecCchh
Confidence 789999999864320 00 000 12344466778888877
Q ss_pred EEEEeeCCCCEEEEECCCCe---EEEeecCCC-----CCeEEEEECCC-CCEEEEecCCCeEEEEeCCCcee------ee
Q psy4393 125 LIVSGSFDESVRIWDVRTGK---CLKTLPAHS-----DPVSAVHFNRD-GSLIVSSSYDGLCRIWDTASGQC------LK 189 (247)
Q Consensus 125 ~l~~~~~d~~i~v~d~~~~~---~~~~~~~~~-----~~i~~~~~~~~-~~~l~~~~~dg~i~v~d~~~~~~------~~ 189 (247)
.++++ .|=.|.+|++.... .+..++.|. ..|++..|+|. ...+.-.+..|.|++-|++.... +.
T Consensus 186 t~lSa-DdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq~alcdn~~klf 264 (460)
T COG5170 186 TLLSA-DDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQSALCDNSKKLF 264 (460)
T ss_pred eeeec-cceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEehhhhhhhhccCchhhh
Confidence 77664 46678999886432 233334442 34778889985 34566677799999999984311 11
Q ss_pred ---------eeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCc-ceEEEEc
Q psy4393 190 ---------TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVV-TPAIICS 235 (247)
Q Consensus 190 ---------~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~-~~~~~~~ 235 (247)
.++......|..+.|+++|+++++-+ -.+|++||.+.. .|+.++.
T Consensus 265 e~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRd-yltvkiwDvnm~k~pikTi~ 319 (460)
T COG5170 265 ELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRD-YLTVKIWDVNMAKNPIKTIP 319 (460)
T ss_pred hhccCcccchhHHHHhhhhcceEEcCCCcEEEEec-cceEEEEecccccCCceeec
Confidence 11112234678899999999988765 369999999865 5766653
No 280
>KOG3914|consensus
Probab=99.09 E-value=2.3e-09 Score=83.19 Aligned_cols=160 Identities=16% Similarity=0.198 Sum_probs=106.3
Q ss_pred eEEEEECCCCCEEEEEcCCCeEEEEECCCceE-EEEEe--cCCccEEEEEEcCCCCEEEEeeCCCC---EEEEECCCCeE
Q psy4393 72 ISDVAWSSDSRLLVSGSDDKTLKIWELSSGKC-LKTLK--GHSNYVFCCNFNPQSNLIVSGSFDES---VRIWDVRTGKC 145 (247)
Q Consensus 72 v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~-~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~---i~v~d~~~~~~ 145 (247)
......++++++++.+..+....+++...... .+.+. .-...-..+.+..+......+..-|. +.+|....+.
T Consensus 65 ~~~~~~s~~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~v~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~~~- 143 (390)
T KOG3914|consen 65 PALVLTSDSGRLVAVATSSKQRAVFDYRENPKGAKLLDVSCVPKRPTAISFIREDTSVLVADKAGDVYSFDILSADSGR- 143 (390)
T ss_pred ccccccCCCceEEEEEeCCCceEEEEEecCCCcceeeeEeecccCcceeeeeeccceEEEEeecCCceeeeeecccccC-
Confidence 44456678888888888877776776654332 11111 11111223334333344444433444 4444443332
Q ss_pred EEeecCCCCCeEEEEECCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEEC
Q psy4393 146 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225 (247)
Q Consensus 146 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~ 225 (247)
...+-+|-.-++.++++||+++++++..|..|++-.......+..+..+|..-|..++.-++ +.|++++.|++|++||.
T Consensus 144 ~~~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~~-~~LlS~sGD~tlr~Wd~ 222 (390)
T KOG3914|consen 144 CEPILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTDN-YLLLSGSGDKTLRLWDI 222 (390)
T ss_pred cchhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhheeeeeeccC-ceeeecCCCCcEEEEec
Confidence 23345677788999999999999999999999998877666667777777777888887765 56899999999999999
Q ss_pred CCcceEEE
Q psy4393 226 KVVTPAII 233 (247)
Q Consensus 226 ~~~~~~~~ 233 (247)
..+..+-.
T Consensus 223 ~sgk~L~t 230 (390)
T KOG3914|consen 223 TSGKLLDT 230 (390)
T ss_pred ccCCcccc
Confidence 98876544
No 281
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=99.09 E-value=1.7e-07 Score=71.34 Aligned_cols=187 Identities=21% Similarity=0.186 Sum_probs=121.6
Q ss_pred CCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceEEEEE-ecCC---c
Q psy4393 37 PNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTL-KGHS---N 112 (247)
Q Consensus 37 ~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~-~~~~---~ 112 (247)
+++..+++++.++.+..||..+++......... .+.... ...+..++.+..++.+..+|..+++..... .... .
T Consensus 34 ~~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~~~-~~~~~~-~~~~~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~ 111 (238)
T PF13360_consen 34 PDGGRVYVASGDGNLYALDAKTGKVLWRFDLPG-PISGAP-VVDGGRVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAG 111 (238)
T ss_dssp EETTEEEEEETTSEEEEEETTTSEEEEEEECSS-CGGSGE-EEETTEEEEEETTSEEEEEETTTSCEEEEEEE-SSCTCS
T ss_pred EeCCEEEEEcCCCEEEEEECCCCCEEEEeeccc-ccccee-eecccccccccceeeeEecccCCcceeeeeccccccccc
Confidence 356677777899999999999999887776422 211111 123556667778889999999999887763 3221 1
Q ss_pred cEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCC----------eEEEEECCCCCEEEEecCCCe-EEEEe
Q psy4393 113 YVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDP----------VSAVHFNRDGSLIVSSSYDGL-CRIWD 181 (247)
Q Consensus 113 ~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~----------i~~~~~~~~~~~l~~~~~dg~-i~v~d 181 (247)
..........+..++.+..++.+..+|+++|+.+......... +..-....++ .++.++.++. +.+ |
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~g~~~~~-d 189 (238)
T PF13360_consen 112 VRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPVGEPRGSSPISSFSDINGSPVISDG-RVYVSSGDGRVVAV-D 189 (238)
T ss_dssp TB--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEESSTT-SS--EEEETTEEEEEECCTT-EEEEECCTSSEEEE-E
T ss_pred cccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeecCCCCCCcceeeecccccceEEECC-EEEEEcCCCeEEEE-E
Confidence 1112222223778888888999999999999988776553322 1122222344 6666777775 555 9
Q ss_pred CCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcceE
Q psy4393 182 TASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPA 231 (247)
Q Consensus 182 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~ 231 (247)
+.+++.+-.. .. ..... ...+++..|+.++.++.|..||.++++.+
T Consensus 190 ~~tg~~~w~~--~~-~~~~~-~~~~~~~~l~~~~~~~~l~~~d~~tG~~~ 235 (238)
T PF13360_consen 190 LATGEKLWSK--PI-SGIYS-LPSVDGGTLYVTSSDGRLYALDLKTGKVV 235 (238)
T ss_dssp TTTTEEEEEE--CS-S-ECE-CEECCCTEEEEEETTTEEEEEETTTTEEE
T ss_pred CCCCCEEEEe--cC-CCccC-CceeeCCEEEEEeCCCEEEEEECCCCCEE
Confidence 9999844221 11 11221 14577888888889999999999998764
No 282
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=99.09 E-value=2.5e-07 Score=71.23 Aligned_cols=183 Identities=20% Similarity=0.329 Sum_probs=121.4
Q ss_pred EECCCCCEEEEEe-----CCCeEEEEecC-CCeEEEEEecccCCeEEEEECCCCCEEEEEcC------------------
Q psy4393 34 KFSPNGEWLASSS-----ADKLIKIWGAY-DGKFEKTISGHKLGISDVAWSSDSRLLVSGSD------------------ 89 (247)
Q Consensus 34 ~~s~~~~~l~~~~-----~dg~v~iw~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------------------ 89 (247)
.||+||++|++.- ..|.|-|||.. .-....++..+...-..+.+.|||+.|+++..
T Consensus 57 ~fs~dG~~LytTEnd~~~g~G~IgVyd~~~~~~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM 136 (305)
T PF07433_consen 57 VFSPDGRLLYTTENDYETGRGVIGVYDAARGYRRIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTM 136 (305)
T ss_pred EEcCCCCEEEEeccccCCCcEEEEEEECcCCcEEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhc
Confidence 6999999998753 34789999998 55666778878778889999999988776631
Q ss_pred CCeEEEEECCCceEEEEEe----cCCccEEEEEEcCCCCEEEEeeCCCC-------EEEEECCCCeEEEeec-------C
Q psy4393 90 DKTLKIWELSSGKCLKTLK----GHSNYVFCCNFNPQSNLIVSGSFDES-------VRIWDVRTGKCLKTLP-------A 151 (247)
Q Consensus 90 d~~i~v~d~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~d~~-------i~v~d~~~~~~~~~~~-------~ 151 (247)
+..+...|..+++.+.... -+...+..+++.++|..++..-..|. +-+++. ++.+..+. .
T Consensus 137 ~psL~~ld~~sG~ll~q~~Lp~~~~~lSiRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~~--g~~~~~~~~p~~~~~~ 214 (305)
T PF07433_consen 137 QPSLVYLDARSGALLEQVELPPDLHQLSIRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHRR--GGALRLLPAPEEQWRR 214 (305)
T ss_pred CCceEEEecCCCceeeeeecCccccccceeeEEecCCCcEEEEEecCCCCCccCCeEEEEcC--CCcceeccCChHHHHh
Confidence 1245556777777665533 25567899999999876665433332 333332 22222222 2
Q ss_pred CCCCeEEEEECCCCCEEEE-ecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEE
Q psy4393 152 HSDPVSAVHFNRDGSLIVS-SSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 223 (247)
Q Consensus 152 ~~~~i~~~~~~~~~~~l~~-~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw 223 (247)
-.+.+-++++++++.++++ +-..+.+.+||..+++.+...... .+..++..+++ ++++.+ .|.+...
T Consensus 215 l~~Y~gSIa~~~~g~~ia~tsPrGg~~~~~d~~tg~~~~~~~l~---D~cGva~~~~~-f~~ssG-~G~~~~~ 282 (305)
T PF07433_consen 215 LNGYIGSIAADRDGRLIAVTSPRGGRVAVWDAATGRLLGSVPLP---DACGVAPTDDG-FLVSSG-QGQLIRL 282 (305)
T ss_pred hCCceEEEEEeCCCCEEEEECCCCCEEEEEECCCCCEeeccccC---ceeeeeecCCc-eEEeCC-CccEEEc
Confidence 2467889999999987755 456678999999999877654332 24456666665 555554 4554333
No 283
>KOG4532|consensus
Probab=99.08 E-value=5.9e-08 Score=72.01 Aligned_cols=174 Identities=16% Similarity=0.113 Sum_probs=117.1
Q ss_pred EEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCce-E-EE-EEecCCccEEEEE
Q psy4393 42 LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGK-C-LK-TLKGHSNYVFCCN 118 (247)
Q Consensus 42 l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~-~-~~-~~~~~~~~v~~~~ 118 (247)
+..++.|.++++++++.+.....+......+..++.++|++++++.+....|..|.+.... . .+ ......+.-.+..
T Consensus 131 ~~i~sndht~k~~~~~~~s~~~~~h~~~~~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S 210 (344)
T KOG4532|consen 131 LNIASNDHTGKTMVVSGDSNKFAVHNQNLTQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNS 210 (344)
T ss_pred eeeccCCcceeEEEEecCcccceeeccccceeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeee
Confidence 4556777777777776544333332222347889999999999999999999999887643 2 22 1222233445778
Q ss_pred EcCCCCEEEEeeCCCCEEEEECCCCeEE-----EeecCCCCCeEEEEECCCCC--EEEEecCCCeEEEEeCCCceeeeee
Q psy4393 119 FNPQSNLIVSGSFDESVRIWDVRTGKCL-----KTLPAHSDPVSAVHFNRDGS--LIVSSSYDGLCRIWDTASGQCLKTL 191 (247)
Q Consensus 119 ~~~~~~~l~~~~~d~~i~v~d~~~~~~~-----~~~~~~~~~i~~~~~~~~~~--~l~~~~~dg~i~v~d~~~~~~~~~~ 191 (247)
|+.....+|++..||.+.+||+|.-... ..-..|.+.++...|++.|. +|+..-.-+.+.+.|++++...+.+
T Consensus 211 ~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~~~q~I 290 (344)
T KOG4532|consen 211 FSENDLQFAVVFQDGTCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYVNHQVI 290 (344)
T ss_pred eccCcceEEEEecCCcEEEEEecccccchhhhcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcccCceeeEE
Confidence 9999999999999999999999865432 22345788999999998664 4555555678999999988655443
Q ss_pred ccCCC-------CCeEEEEECCCCCEEEEEE
Q psy4393 192 IDDDN-------PPVSFVKFSPNGKYILAAT 215 (247)
Q Consensus 192 ~~~~~-------~~v~~~~~s~~~~~l~~~~ 215 (247)
...+. ..+..-.|+.++.-+.+.+
T Consensus 291 ~i~~d~~~~~~tq~ifgt~f~~~n~s~~v~~ 321 (344)
T KOG4532|consen 291 VIPDDVERKHNTQHIFGTNFNNENESNDVKN 321 (344)
T ss_pred ecCccccccccccccccccccCCCccccccc
Confidence 22211 2244455666665554444
No 284
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=99.07 E-value=1.7e-06 Score=66.24 Aligned_cols=180 Identities=19% Similarity=0.290 Sum_probs=117.2
Q ss_pred eEEEEEC-CCCCEEEEEeCCCeEEEEecCCCeEEEEEec-----ccCCeEEEEECCCCCEEEEEcCC--------CeEEE
Q psy4393 30 VSSVKFS-PNGEWLASSSADKLIKIWGAYDGKFEKTISG-----HKLGISDVAWSSDSRLLVSGSDD--------KTLKI 95 (247)
Q Consensus 30 v~~~~~s-~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~d--------~~i~v 95 (247)
...+++. +++.+++ +...+ +.++|..+++....... .....+++++.|+|++.++.... |.+..
T Consensus 42 ~~G~~~~~~~g~l~v-~~~~~-~~~~d~~~g~~~~~~~~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~ 119 (246)
T PF08450_consen 42 PNGMAFDRPDGRLYV-ADSGG-IAVVDPDTGKVTVLADLPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYR 119 (246)
T ss_dssp EEEEEEECTTSEEEE-EETTC-EEEEETTTTEEEEEEEEETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEE
T ss_pred CceEEEEccCCEEEE-EEcCc-eEEEecCCCcEEEEeeccCCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEE
Confidence 6677777 6655544 45444 55568887765544443 23458899999999987776543 55777
Q ss_pred EECCCceEEEEEecCCccEEEEEEcCCCCEEE-EeeCCCCEEEEECCCCe-------EEEeecCCCCCeEEEEECCCCCE
Q psy4393 96 WELSSGKCLKTLKGHSNYVFCCNFNPQSNLIV-SGSFDESVRIWDVRTGK-------CLKTLPAHSDPVSAVHFNRDGSL 167 (247)
Q Consensus 96 ~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~v~d~~~~~-------~~~~~~~~~~~i~~~~~~~~~~~ 167 (247)
++.. ++... +.........++|+|+++.|+ +-+..+.|..+++.... ....+....+....++++.+|++
T Consensus 120 ~~~~-~~~~~-~~~~~~~pNGi~~s~dg~~lyv~ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l 197 (246)
T PF08450_consen 120 IDPD-GKVTV-VADGLGFPNGIAFSPDGKTLYVADSFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNL 197 (246)
T ss_dssp EETT-SEEEE-EEEEESSEEEEEEETTSSEEEEEETTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-E
T ss_pred ECCC-CeEEE-EecCcccccceEECCcchheeecccccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCE
Confidence 7776 44333 333344567899999998775 55677789999885321 11122222234678999999998
Q ss_pred EEEecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEE-CCCCCEEEEEE
Q psy4393 168 IVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKF-SPNGKYILAAT 215 (247)
Q Consensus 168 l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~-s~~~~~l~~~~ 215 (247)
.++....+.|.++|.. ++.+..+... ....++++| .++.+.|+..+
T Consensus 198 ~va~~~~~~I~~~~p~-G~~~~~i~~p-~~~~t~~~fgg~~~~~L~vTt 244 (246)
T PF08450_consen 198 WVADWGGGRIVVFDPD-GKLLREIELP-VPRPTNCAFGGPDGKTLYVTT 244 (246)
T ss_dssp EEEEETTTEEEEEETT-SCEEEEEE-S-SSSEEEEEEESTTSSEEEEEE
T ss_pred EEEEcCCCEEEEECCC-ccEEEEEcCC-CCCEEEEEEECCCCCEEEEEe
Confidence 8887788999999988 7766666544 346788999 57767666554
No 285
>KOG4190|consensus
Probab=99.07 E-value=7.3e-10 Score=89.68 Aligned_cols=168 Identities=19% Similarity=0.316 Sum_probs=123.2
Q ss_pred EEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCC-------ceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCE
Q psy4393 63 KTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSS-------GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 135 (247)
Q Consensus 63 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 135 (247)
+.+.+|...|..+.--.+.+-+++++.|.++++|.++. ..+..+.+.|..+|..+.|-.+.+.+++ .||.|
T Consensus 729 ~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~S--cD~gi 806 (1034)
T KOG4190|consen 729 CNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIAS--CDGGI 806 (1034)
T ss_pred ecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeee--ccCcc
Confidence 44567777777776555667789999999999999864 3356677889999999999888777765 58899
Q ss_pred EEEECCCCeEEEeec--CCCCCeEEEEECC--CCCEEEE-ecCCCeEEEEeCCCceeeeeecc----CCCCCeEEEEECC
Q psy4393 136 RIWDVRTGKCLKTLP--AHSDPVSAVHFNR--DGSLIVS-SSYDGLCRIWDTASGQCLKTLID----DDNPPVSFVKFSP 206 (247)
Q Consensus 136 ~v~d~~~~~~~~~~~--~~~~~i~~~~~~~--~~~~l~~-~~~dg~i~v~d~~~~~~~~~~~~----~~~~~v~~~~~s~ 206 (247)
++||.-.++.+..+. ...+....+.--+ +...+++ ++...+++++|.+..+....+.. ..+..+.+++..+
T Consensus 807 HlWDPFigr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~R~iaVa~ 886 (1034)
T KOG4190|consen 807 HLWDPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALTRAIAVAD 886 (1034)
T ss_pred eeecccccchhHhhhcCcccCCCceeEecccCcchheeeeccchhhheeeecccccceeeEEeccCCCCchheeEEEecc
Confidence 999998777655332 1222333333333 3334444 47788999999998776554422 2335678999999
Q ss_pred CCCEEEEEEcCCeEEEEECCCcceEE
Q psy4393 207 NGKYILAATLDNTLKLWDSKVVTPAI 232 (247)
Q Consensus 207 ~~~~l~~~~~dg~i~vwd~~~~~~~~ 232 (247)
.|++++++-..|.|.+.|.+++..+.
T Consensus 887 ~GN~lAa~LSnGci~~LDaR~G~vIN 912 (1034)
T KOG4190|consen 887 KGNKLAAALSNGCIAILDARNGKVIN 912 (1034)
T ss_pred CcchhhHHhcCCcEEEEecCCCceec
Confidence 99999999999999999999988664
No 286
>KOG4714|consensus
Probab=99.05 E-value=3.6e-09 Score=77.95 Aligned_cols=148 Identities=18% Similarity=0.263 Sum_probs=98.6
Q ss_pred CCCEEEEEcCCCeEEEEECCCceEE-EEEecCCccEEEEEEcCCCCEEEEee-----CCCCEEEEECCCCeEEEeecCCC
Q psy4393 80 DSRLLVSGSDDKTLKIWELSSGKCL-KTLKGHSNYVFCCNFNPQSNLIVSGS-----FDESVRIWDVRTGKCLKTLPAHS 153 (247)
Q Consensus 80 ~~~~l~~~~~d~~i~v~d~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~-----~d~~i~v~d~~~~~~~~~~~~~~ 153 (247)
.++.++++..||.+.+.+.+.-..+ ..+......-...+....++.+.+++ .-+..+.|+++..+....-+...
T Consensus 100 ~~t~V~~~~~dg~~~v~s~~~~~~~~~~i~~~~~~~as~~~~~~~~~i~s~~~g~~n~~d~~~a~~~~p~~t~~~~~~~~ 179 (319)
T KOG4714|consen 100 TDNRVCIGYADGSLAVFSTDKDLALMSRIPSIHSGSASRKICRHGNSILSGGCGNWNAQDNFYANTLDPIKTLIPSKKAL 179 (319)
T ss_pred cCCceEecCCCceEEEEechHHHhhhhhcccccccccccceeecccEEecCCcceEeeccceeeeccccccccccccccc
Confidence 4567899999999999987652111 11111111111223334455555443 22456677766443322222223
Q ss_pred CCeEEEEECCCCC-EEEEecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCC-CCEEEEEEcCCeEEEEECCC
Q psy4393 154 DPVSAVHFNRDGS-LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPN-GKYILAATLDNTLKLWDSKV 227 (247)
Q Consensus 154 ~~i~~~~~~~~~~-~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~vwd~~~ 227 (247)
..+.+++-+|... .+++|+.||.+.+||.++......+...++.++..+-|+|. +..|.++++||.+.-||..+
T Consensus 180 ~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wdas~ 255 (319)
T KOG4714|consen 180 DAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDAST 255 (319)
T ss_pred ccchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEcCCC
Confidence 3488899999655 56778889999999999987777777778888999999984 67999999999999999886
No 287
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=99.03 E-value=2.9e-07 Score=74.00 Aligned_cols=195 Identities=20% Similarity=0.313 Sum_probs=130.9
Q ss_pred CCeEEEEECCCCC--EEEE-----EeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcC-----------
Q psy4393 28 KAVSSVKFSPNGE--WLAS-----SSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSD----------- 89 (247)
Q Consensus 28 ~~v~~~~~s~~~~--~l~~-----~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----------- 89 (247)
..|....|+|.++ .|+. .+..+.+++|.+..+..+....-....=..+.|.+.|+.++.--.
T Consensus 174 ~gi~dFsisP~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lfk~~~~qLkW~~~g~~ll~l~~t~~ksnKsyfg 253 (561)
T COG5354 174 VGILDFSISPEGNHDELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLFKVSGVQLKWQVLGKYLLVLVMTHTKSNKSYFG 253 (561)
T ss_pred cceeeEEecCCCCCceEEEEccccCCCCcEEEEEEccCCCeeeeeeeEeecccEEEEecCCceEEEEEEEeeecccceec
Confidence 5677888888644 3442 456788999988755544332222222345789999987754311
Q ss_pred CCeEEEEECCCceEEEEEecCCccEEEEEEcCCCCEEEEee--CCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCE
Q psy4393 90 DKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS--FDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSL 167 (247)
Q Consensus 90 d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 167 (247)
...+.++++.. ..++......++|....|.|.++.+++.+ .+-.+.++|++.. ....+. ...-..+.|+|.+++
T Consensus 254 esnLyl~~~~e-~~i~V~~~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~N-l~~~~P--e~~rNT~~fsp~~r~ 329 (561)
T COG5354 254 ESNLYLLRITE-RSIPVEKDLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGN-LRFYFP--EQKRNTIFFSPHERY 329 (561)
T ss_pred cceEEEEeecc-cccceeccccccceeeeecccCCceeEEecccccceeecccccc-eEEecC--CcccccccccCcccE
Confidence 23577888763 32333334578899999999988877654 5677899999865 333332 334456789999999
Q ss_pred EEEecCC---CeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEE------cCCeEEEEECCCc
Q psy4393 168 IVSSSYD---GLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT------LDNTLKLWDSKVV 228 (247)
Q Consensus 168 l~~~~~d---g~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~------~dg~i~vwd~~~~ 228 (247)
++.++.+ |.+.+||..........+.. .....+.|+||++++.+.. .|+.|.|||.-..
T Consensus 330 il~agF~nl~gni~i~~~~~rf~~~~~~~~--~n~s~~~wspd~qF~~~~~ts~k~~~Dn~i~l~~v~g~ 397 (561)
T COG5354 330 ILFAGFDNLQGNIEIFDPAGRFKVAGAFNG--LNTSYCDWSPDGQFYDTDTTSEKLRVDNSIKLWDVYGA 397 (561)
T ss_pred EEEecCCccccceEEeccCCceEEEEEeec--CCceEeeccCCceEEEecCCCcccccCcceEEEEecCc
Confidence 9987765 67999998776544422222 2345678999999998765 3788999997554
No 288
>KOG1832|consensus
Probab=99.02 E-value=2.1e-10 Score=97.29 Aligned_cols=190 Identities=22% Similarity=0.356 Sum_probs=139.5
Q ss_pred EEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCC--eEEEEECC
Q psy4393 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDK--TLKIWELS 99 (247)
Q Consensus 22 ~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~v~d~~ 99 (247)
++..|....+|++|+-+.++|+.|+-.|.|+++++.+|.......+|..+++-+.-+.+|..+++.+... ...+|++.
T Consensus 1096 ~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaLW~~~ 1175 (1516)
T KOG1832|consen 1096 SFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSALWDAS 1175 (1516)
T ss_pred hhhccccceeeEEeecCCceEEeeeccceEEEEEccCccccccccccccccccccccCCcceeeeeccccCchHHHhccc
Confidence 3456889999999999999999999999999999999999999999999999998888999887765533 46789986
Q ss_pred C-ceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecC----CCCCeEEEEECCCCCEEEEecCC
Q psy4393 100 S-GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPA----HSDPVSAVHFNRDGSLIVSSSYD 174 (247)
Q Consensus 100 ~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~----~~~~i~~~~~~~~~~~l~~~~~d 174 (247)
. +...+.+.+. .++.|+.....-+.|+......+||++++..+..+-. ....-+++.|+|+.++++ .|
T Consensus 1176 s~~~~~Hsf~ed----~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~tylt~~~~~~y~~n~a~FsP~D~LIl---nd 1248 (1516)
T KOG1832|consen 1176 STGGPRHSFDED----KAVKFSNSLQFRALGTEADDALLYDVQTCSPLQTYLTDTVTSSYSNNLAHFSPCDTLIL---ND 1248 (1516)
T ss_pred cccCcccccccc----ceeehhhhHHHHHhcccccceEEEecccCcHHHHhcCcchhhhhhccccccCCCcceEe---eC
Confidence 4 3444454432 3566776655556677667889999999876544211 112236778999998877 56
Q ss_pred CeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCC
Q psy4393 175 GLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKV 227 (247)
Q Consensus 175 g~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~ 227 (247)
|. +||.+..+.++.+-.- . -...=.|+|+|..++..+ .|||+++
T Consensus 1249 Gv--LWDvR~~~aIh~FD~f-t-~~~~G~FHP~g~eVIINS-----EIwD~RT 1292 (1516)
T KOG1832|consen 1249 GV--LWDVRIPEAIHRFDQF-T-DYGGGGFHPSGNEVIINS-----EIWDMRT 1292 (1516)
T ss_pred ce--eeeeccHHHHhhhhhh-e-ecccccccCCCceEEeec-----hhhhhHH
Confidence 64 7999987655544211 1 111234999999999887 4899876
No 289
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=99.02 E-value=3.8e-07 Score=68.41 Aligned_cols=164 Identities=14% Similarity=0.246 Sum_probs=106.1
Q ss_pred EEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEec-------ccCCeEEEEECCCC------CEEEEEcCCCeEEEEE
Q psy4393 31 SSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG-------HKLGISDVAWSSDS------RLLVSGSDDKTLKIWE 97 (247)
Q Consensus 31 ~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~-------~~~~v~~~~~~~~~------~~l~~~~~d~~i~v~d 97 (247)
..++||||+.+||.+...|+|+++|+.... ...+.. ....|..+.|.+.. ..+++-.-.|.++-|-
T Consensus 47 Rkl~WSpD~tlLa~a~S~G~i~vfdl~g~~-lf~I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~ 125 (282)
T PF15492_consen 47 RKLAWSPDCTLLAYAESTGTIRVFDLMGSE-LFVIPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYL 125 (282)
T ss_pred eEEEECCCCcEEEEEcCCCeEEEEecccce-eEEcCcccccCCccccceeeeEeeccccccccceeEEEEeccceeeeEE
Confidence 467999999999999999999999986533 222221 12346666665421 1355555677666665
Q ss_pred CCC-----ceEEEEEec---CCccEEEEEEcCCCCEEEEeeCCC-----------CEEEEECCCCeEE------------
Q psy4393 98 LSS-----GKCLKTLKG---HSNYVFCCNFNPQSNLIVSGSFDE-----------SVRIWDVRTGKCL------------ 146 (247)
Q Consensus 98 ~~~-----~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d~-----------~i~v~d~~~~~~~------------ 146 (247)
+.. .+....+.. ....|.++.++|..++|+.|+... -+..|.+-++.+.
T Consensus 126 vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~h~LLlVgG~~~~~~~~s~a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~ 205 (282)
T PF15492_consen 126 VSVGTNQGYQENHSFSFSSHYPHGINSAVYHPKHRLLLVGGCEQNQDGMSKASSCGLTAWRILSDSPYYKQVTSSEDDIT 205 (282)
T ss_pred EEcccCCcceeeEEEEecccCCCceeEEEEcCCCCEEEEeccCCCCCccccccccCceEEEEcCCCCcEEEccccCcccc
Confidence 422 222333322 345688999999988888776421 2555654322110
Q ss_pred --------Ee------e---cCCCCCeEEEEECCCCCEEEEecCCCeEEEEeCCCceeeeeeccCC
Q psy4393 147 --------KT------L---PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD 195 (247)
Q Consensus 147 --------~~------~---~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~ 195 (247)
.. + ......|..|..+|||..|++...+|.|.+|++.+-+....+...+
T Consensus 206 ~~~~~~~~~~~~~~~~fs~~~~~~d~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL~~~~~W~~~e 271 (282)
T PF15492_consen 206 ASSKRRGLLRIPSFKFFSRQGQEQDGIFKMSLSPDGSLLACIHFSGSLSLWEIPSLRLQRSWKQDE 271 (282)
T ss_pred ccccccceeeccceeeeeccccCCCceEEEEECCCCCEEEEEEcCCeEEEEecCcchhhcccchhh
Confidence 00 0 1123468889999999999999999999999998877666654443
No 290
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=98.98 E-value=2.8e-07 Score=83.73 Aligned_cols=156 Identities=18% Similarity=0.267 Sum_probs=108.0
Q ss_pred EEEEECC-CCCEEEEEeCCCeEEEEecCCCeEEEEEecc---------------cCCeEEEEECCCCCE-EEEEcCCCeE
Q psy4393 31 SSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTISGH---------------KLGISDVAWSSDSRL-LVSGSDDKTL 93 (247)
Q Consensus 31 ~~~~~s~-~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~---------------~~~v~~~~~~~~~~~-l~~~~~d~~i 93 (247)
..++|+| ++..+++...++.|++|+..++... .+.+. ......++++|+++. +++...++.|
T Consensus 686 ~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~-~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~I 764 (1057)
T PLN02919 686 WDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTR-VFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSI 764 (1057)
T ss_pred eEEEEecCCCeEEEEECCCCeEEEEECCCCeEE-EEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECCCCeE
Confidence 4689999 4555666677889999998766432 12111 123456899999884 4566667899
Q ss_pred EEEECCCceEEEEEec-------------C--------CccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecC-
Q psy4393 94 KIWELSSGKCLKTLKG-------------H--------SNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPA- 151 (247)
Q Consensus 94 ~v~d~~~~~~~~~~~~-------------~--------~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~- 151 (247)
++||+.++.......+ . ...-..++++++|.++++-..++.|++||..++........
T Consensus 765 rv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVADs~N~rIrviD~~tg~v~tiaG~G 844 (1057)
T PLN02919 765 RALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVADSYNHKIKKLDPATKRVTTLAGTG 844 (1057)
T ss_pred EEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCcEEEEECCCCEEEEEECCCCeEEEEeccC
Confidence 9999987643211100 0 01124678899999888888899999999987765432211
Q ss_pred ------------CCCCeEEEEECCCCCEEEEecCCCeEEEEeCCCcee
Q psy4393 152 ------------HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC 187 (247)
Q Consensus 152 ------------~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~ 187 (247)
.-.....++++++|+++++-+.++.|++||+.+++.
T Consensus 845 ~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid~~~~~~ 892 (1057)
T PLN02919 845 KAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSLIRYLDLNKGEA 892 (1057)
T ss_pred CcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCEEEEEECCCCcc
Confidence 112356789999999888888899999999988754
No 291
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=98.96 E-value=5.5e-07 Score=80.57 Aligned_cols=198 Identities=15% Similarity=0.221 Sum_probs=132.6
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCeEEEE----ecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECC---
Q psy4393 27 TKAVSSVKFSPNGEWLASSSADKLIKIW----GAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELS--- 99 (247)
Q Consensus 27 ~~~v~~~~~s~~~~~l~~~~~dg~v~iw----~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~--- 99 (247)
...|.++.|-++...++.+..+|.|.+. +..... ...+..-+.+|.+++|+||+..++..+.++.+.+.+-.
T Consensus 75 ~~~ivs~~yl~d~~~l~~~~~~Gdi~~~~~~~~~~~~~-~E~VG~vd~GI~a~~WSPD~Ella~vT~~~~l~~mt~~fd~ 153 (928)
T PF04762_consen 75 NDKIVSFQYLADSESLCIALASGDIILVREDPDPDEDE-IEIVGSVDSGILAASWSPDEELLALVTGEGNLLLMTRDFDP 153 (928)
T ss_pred CCcEEEEEeccCCCcEEEEECCceEEEEEccCCCCCce-eEEEEEEcCcEEEEEECCCcCEEEEEeCCCEEEEEeccceE
Confidence 4579999999999988888999999988 443332 23333456789999999999999988888877664311
Q ss_pred ------------CceEE--------EEEec------------------------CCccEEEEEEcCCCCEEEEeeC---C
Q psy4393 100 ------------SGKCL--------KTLKG------------------------HSNYVFCCNFNPQSNLIVSGSF---D 132 (247)
Q Consensus 100 ------------~~~~~--------~~~~~------------------------~~~~v~~~~~~~~~~~l~~~~~---d 132 (247)
..+.+ ..|.+ ..+.-..++|-.||.++|+.+- .
T Consensus 154 i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s~dd~~~~ISWRGDG~yFAVss~~~~~ 233 (928)
T PF04762_consen 154 ISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVPKVDEGKLSWDDGRVRISWRGDGEYFAVSSVEPET 233 (928)
T ss_pred EEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCCCccccCccccCCCceEEEECCCCcEEEEEEEEcCC
Confidence 00000 01100 1123346789999999998764 2
Q ss_pred ---CCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecC---CCeEEEEeCCCceeeeeecc---CCCCCeEEEE
Q psy4393 133 ---ESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY---DGLCRIWDTASGQCLKTLID---DDNPPVSFVK 203 (247)
Q Consensus 133 ---~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~---dg~i~v~d~~~~~~~~~~~~---~~~~~v~~~~ 203 (247)
+.++||+-. |........-.+--.+++|-|.|.++|+.-. .-.|.+|. ++|-....+.. .....+..++
T Consensus 234 ~~~R~iRVy~Re-G~L~stSE~v~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfE-rNGLrhgeF~l~~~~~~~~v~~l~ 311 (928)
T PF04762_consen 234 GSRRVIRVYSRE-GELQSTSEPVDGLEGALSWRPSGNLIASSQRLPDRHDVVFFE-RNGLRHGEFTLRFDPEEEKVIELA 311 (928)
T ss_pred CceeEEEEECCC-ceEEeccccCCCccCCccCCCCCCEEEEEEEcCCCcEEEEEe-cCCcEeeeEecCCCCCCceeeEEE
Confidence 468999854 5544333333344457899999999987754 23455554 34433333322 3456789999
Q ss_pred ECCCCCEEEEEEcCCeEEEEECCCc
Q psy4393 204 FSPNGKYILAATLDNTLKLWDSKVV 228 (247)
Q Consensus 204 ~s~~~~~l~~~~~dg~i~vwd~~~~ 228 (247)
|++|+..||....|. |.+|-....
T Consensus 312 Wn~ds~iLAv~~~~~-vqLWt~~NY 335 (928)
T PF04762_consen 312 WNSDSEILAVWLEDR-VQLWTRSNY 335 (928)
T ss_pred ECCCCCEEEEEecCC-ceEEEeeCC
Confidence 999999999977554 999987664
No 292
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=98.93 E-value=6.7e-09 Score=55.23 Aligned_cols=38 Identities=37% Similarity=0.749 Sum_probs=35.5
Q ss_pred eEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEe
Q psy4393 18 VLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWG 55 (247)
Q Consensus 18 ~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~ 55 (247)
....++.+|.++|.+++|+|++++|++++.|+.|++||
T Consensus 2 ~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 2 KCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred eEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 45678899999999999999999999999999999997
No 293
>KOG2695|consensus
Probab=98.93 E-value=6.9e-09 Score=79.36 Aligned_cols=149 Identities=14% Similarity=0.248 Sum_probs=109.2
Q ss_pred EEEcCCCeEEEEECCCceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCe-----EEEeecCCCCCeEEE
Q psy4393 85 VSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK-----CLKTLPAHSDPVSAV 159 (247)
Q Consensus 85 ~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~-----~~~~~~~~~~~i~~~ 159 (247)
++.+.+..+-+-|++++-. ..+. ..+.|.+..|...++++..|+.+|.|-.+|+|.+. +... --|+..|+++
T Consensus 228 fs~G~sqqv~L~nvetg~~-qsf~-sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~r-lyh~Ssvtsl 304 (425)
T KOG2695|consen 228 FSVGLSQQVLLTNVETGHQ-QSFQ-SKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQR-LYHDSSVTSL 304 (425)
T ss_pred ecccccceeEEEEeecccc-cccc-cchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEE-EEcCcchhhh
Confidence 4455666777888887643 2343 45668888888888999999999999999998652 2222 2467889998
Q ss_pred EECC-CCCEEEEecCCCeEEEEeCCCcee---eeeeccCCC-CCeEEEEECCCCCEEEEEEcCCeEEEEECCCcceEEEE
Q psy4393 160 HFNR-DGSLIVSSSYDGLCRIWDTASGQC---LKTLIDDDN-PPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIIC 234 (247)
Q Consensus 160 ~~~~-~~~~l~~~~~dg~i~v~d~~~~~~---~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 234 (247)
..-. ++.+|++.+.+|.|++||.+-.++ +..+..+.+ ....-+..++....+++++.|-..|||..+.++.+.++
T Consensus 305 q~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl~~ghLl~ti 384 (425)
T KOG2695|consen 305 QILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSLDSGHLLCTI 384 (425)
T ss_pred hhhccccceEeeccCcCceeEeeehhhhcccceeeeecccccccccccccccccceEEEccCeeEEEEEecccCceeecc
Confidence 8877 788999999999999999987666 444433221 11122446777889999999999999999988776654
Q ss_pred cc
Q psy4393 235 ST 236 (247)
Q Consensus 235 ~~ 236 (247)
.-
T Consensus 385 pf 386 (425)
T KOG2695|consen 385 PF 386 (425)
T ss_pred CC
Confidence 43
No 294
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=98.91 E-value=2.3e-06 Score=69.84 Aligned_cols=186 Identities=18% Similarity=0.122 Sum_probs=113.5
Q ss_pred CCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceEEEEEecCCccEEE-
Q psy4393 38 NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFC- 116 (247)
Q Consensus 38 ~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~- 116 (247)
.+..+++++.+|.+.-+|..+++................ .++..++.++.++.+..+|..+++.+....... .+.+
T Consensus 64 ~~~~v~v~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~p~--v~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~-~~~~~ 140 (377)
T TIGR03300 64 AGGKVYAADADGTVVALDAETGKRLWRVDLDERLSGGVG--ADGGLVFVGTEKGEVIALDAEDGKELWRAKLSS-EVLSP 140 (377)
T ss_pred ECCEEEEECCCCeEEEEEccCCcEeeeecCCCCcccceE--EcCCEEEEEcCCCEEEEEECCCCcEeeeeccCc-eeecC
Confidence 366788888899999999989988776553322111222 246778888899999999999998766554322 2211
Q ss_pred EEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeE-----EEEECCCCCEEEEecCCCeEEEEeCCCceeeeee
Q psy4393 117 CNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVS-----AVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 191 (247)
Q Consensus 117 ~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~-----~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~ 191 (247)
... .+..++.+..++.++.||.++++.+........... +.... +..++.+..+|.+..+|+.+++.+-..
T Consensus 141 p~v--~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~~~~~sp~~~--~~~v~~~~~~g~v~ald~~tG~~~W~~ 216 (377)
T TIGR03300 141 PLV--ANGLVVVRTNDGRLTALDAATGERLWTYSRVTPALTLRGSASPVIA--DGGVLVGFAGGKLVALDLQTGQPLWEQ 216 (377)
T ss_pred CEE--ECCEEEEECCCCeEEEEEcCCCceeeEEccCCCceeecCCCCCEEE--CCEEEEECCCCEEEEEEccCCCEeeee
Confidence 111 245677778899999999999988776654322111 11111 236777888899999999888654322
Q ss_pred ccCCC---CC---eEEEEECC--CCCEEEEEEcCCeEEEEECCCcce
Q psy4393 192 IDDDN---PP---VSFVKFSP--NGKYILAATLDNTLKLWDSKVVTP 230 (247)
Q Consensus 192 ~~~~~---~~---v~~~~~s~--~~~~l~~~~~dg~i~vwd~~~~~~ 230 (247)
..... .. ...+.-+| .+..+++++.+|.+..||.++++.
T Consensus 217 ~~~~~~g~~~~~~~~~~~~~p~~~~~~vy~~~~~g~l~a~d~~tG~~ 263 (377)
T TIGR03300 217 RVALPKGRTELERLVDVDGDPVVDGGQVYAVSYQGRVAALDLRSGRV 263 (377)
T ss_pred ccccCCCCCchhhhhccCCccEEECCEEEEEEcCCEEEEEECCCCcE
Confidence 11000 00 00000001 244666666777777777766544
No 295
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=98.90 E-value=3.3e-06 Score=68.92 Aligned_cols=188 Identities=15% Similarity=0.117 Sum_probs=114.4
Q ss_pred CEEEEEeCCCeEEEEecCCCeEEEEEecccCCeE-----EEEECCCCCEEEEEcCCCeEEEEECCCceEEEEEecCCc--
Q psy4393 40 EWLASSSADKLIKIWGAYDGKFEKTISGHKLGIS-----DVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSN-- 112 (247)
Q Consensus 40 ~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~-----~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~-- 112 (247)
..++.+..+|.+..+|..+++............. .... .+..++.+..++.+..+|.++++.+........
T Consensus 146 ~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~~~~~sp~~--~~~~v~~~~~~g~v~ald~~tG~~~W~~~~~~~~g 223 (377)
T TIGR03300 146 GLVVVRTNDGRLTALDAATGERLWTYSRVTPALTLRGSASPVI--ADGGVLVGFAGGKLVALDLQTGQPLWEQRVALPKG 223 (377)
T ss_pred CEEEEECCCCeEEEEEcCCCceeeEEccCCCceeecCCCCCEE--ECCEEEEECCCCEEEEEEccCCCEeeeeccccCCC
Confidence 4555566778888888877776665543221110 0111 134677788889999999988876543321100
Q ss_pred -----cEEEEEEcC--CCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCCCeEEEEeCCCc
Q psy4393 113 -----YVFCCNFNP--QSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 185 (247)
Q Consensus 113 -----~v~~~~~~~--~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~ 185 (247)
....+.-+| .+..++.++.+|.++.+|..+++.+...... . ..... ..+..+++++.+|.+..+|..++
T Consensus 224 ~~~~~~~~~~~~~p~~~~~~vy~~~~~g~l~a~d~~tG~~~W~~~~~-~-~~~p~--~~~~~vyv~~~~G~l~~~d~~tG 299 (377)
T TIGR03300 224 RTELERLVDVDGDPVVDGGQVYAVSYQGRVAALDLRSGRVLWKRDAS-S-YQGPA--VDDNRLYVTDADGVVVALDRRSG 299 (377)
T ss_pred CCchhhhhccCCccEEECCEEEEEEcCCEEEEEECCCCcEEEeeccC-C-ccCce--EeCCEEEEECCCCeEEEEECCCC
Confidence 000000011 2457777888999999999999876655421 1 11122 24567888889999999999988
Q ss_pred eeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcceEEEEc
Q psy4393 186 QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICS 235 (247)
Q Consensus 186 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 235 (247)
+.+-............... .+..|++++.+|.|.++|.++++.+-.+.
T Consensus 300 ~~~W~~~~~~~~~~ssp~i--~g~~l~~~~~~G~l~~~d~~tG~~~~~~~ 347 (377)
T TIGR03300 300 SELWKNDELKYRQLTAPAV--VGGYLVVGDFEGYLHWLSREDGSFVARLK 347 (377)
T ss_pred cEEEccccccCCccccCEE--ECCEEEEEeCCCEEEEEECCCCCEEEEEE
Confidence 7653321111111111122 35689999999999999998887665544
No 296
>KOG1912|consensus
Probab=98.90 E-value=4.1e-07 Score=76.78 Aligned_cols=209 Identities=15% Similarity=0.239 Sum_probs=149.9
Q ss_pred CeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCC------------CEEEEEcCCCeEEEE
Q psy4393 29 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS------------RLLVSGSDDKTLKIW 96 (247)
Q Consensus 29 ~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~------------~~l~~~~~d~~i~v~ 96 (247)
.-.++.|+|.| ++|.|+ ...|.+-|..+-+..+.+..|...|+.+.|.|.. -.|+++...|.|.+|
T Consensus 17 N~~A~Dw~~~G-LiAygs-hslV~VVDs~s~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~ 94 (1062)
T KOG1912|consen 17 NRNAADWSPSG-LIAYGS-HSLVSVVDSRSLQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILV 94 (1062)
T ss_pred cccccccCccc-eEEEec-CceEEEEehhhhhhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEEEE
Confidence 35577899877 345544 5578888988888888888899999999997621 246778888999999
Q ss_pred ECCCceEEEEEecCCccEEEEEEcC---CC-CEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECC-CCCEEEEe
Q psy4393 97 ELSSGKCLKTLKGHSNYVFCCNFNP---QS-NLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNR-DGSLIVSS 171 (247)
Q Consensus 97 d~~~~~~~~~~~~~~~~v~~~~~~~---~~-~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~ 171 (247)
|...+..+..+..+.+++..++|-+ +. .+++.-.....+.+|+..+|+.............|+.++| |.+++..-
T Consensus 95 d~~~~s~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~ys~~iLs~f~~DPfd~rh~~~l 174 (1062)
T KOG1912|consen 95 DFVLASVINWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYDYSHEILSCFRVDPFDSRHFCVL 174 (1062)
T ss_pred EehhhhhhhhhcCCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCceeeccccCCcceeeeeeCCCCcceEEEE
Confidence 9998887777888888888888865 33 4566666677899999999998887776667788899988 66677777
Q ss_pred cCCCeEEEEeCCC-------ceeeeeeccC------------------CCCC------eEEEEECCCCCEEEEEEcCCeE
Q psy4393 172 SYDGLCRIWDTAS-------GQCLKTLIDD------------------DNPP------VSFVKFSPNGKYILAATLDNTL 220 (247)
Q Consensus 172 ~~dg~i~v~d~~~-------~~~~~~~~~~------------------~~~~------v~~~~~s~~~~~l~~~~~dg~i 220 (247)
+..|.+.+-+.-. ++..+.-... .... ...++|+|.-+.++....-..+
T Consensus 175 ~s~g~vl~~~~l~~sep~~pgk~~qI~sd~Sdl~~lere~at~ns~ts~~~sa~fity~a~faf~p~~rn~lfi~~prel 254 (1062)
T KOG1912|consen 175 GSKGFVLSCKDLGLSEPDVPGKEFQITSDHSDLAHLERETATGNSTTSTPASAYFITYCAQFAFSPHWRNILFITFPREL 254 (1062)
T ss_pred ccCceEEEEeccCCCCCCCCceeEEEecCccchhhhhhhhhccccccCCCcchhHHHHHHhhhcChhhhceEEEEeccce
Confidence 7778776665321 1111111100 0000 1136789998888888888999
Q ss_pred EEEECCCcceEEEEccCCc
Q psy4393 221 KLWDSKVVTPAIICSTPLN 239 (247)
Q Consensus 221 ~vwd~~~~~~~~~~~~~~~ 239 (247)
.|+|.+-..++-+..-+..
T Consensus 255 lv~dle~~~~l~vvpier~ 273 (1062)
T KOG1912|consen 255 LVFDLEYECCLAVVPIERG 273 (1062)
T ss_pred EEEcchhhceeEEEEeccC
Confidence 9999987776665554443
No 297
>KOG2315|consensus
Probab=98.86 E-value=6.6e-07 Score=72.72 Aligned_cols=148 Identities=20% Similarity=0.370 Sum_probs=102.2
Q ss_pred EEEECCCCCE-EEE--EeCCC---------eEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEc--CCCeEEEEE
Q psy4393 32 SVKFSPNGEW-LAS--SSADK---------LIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGS--DDKTLKIWE 97 (247)
Q Consensus 32 ~~~~s~~~~~-l~~--~~~dg---------~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~v~d 97 (247)
.+.|++-|.- |+. ...|. .++++++........+. ..++|.++.|+|+++.++++- .=..+.++|
T Consensus 222 qm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~s~~V~L~-k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifn 300 (566)
T KOG2315|consen 222 QMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQGESVSVPLL-KEGPVHDVTWSPSGREFAVVYGFMPAKVTIFN 300 (566)
T ss_pred EEEeccCCceEEEEEEEeecCCCccccccceEEEEEecCceEEEecC-CCCCceEEEECCCCCEEEEEEecccceEEEEc
Confidence 4678777663 222 22222 46666665323322232 367899999999998766543 345788999
Q ss_pred CCCceEEEEEecCCccEEEEEEcCCCCEEEEeeCC---CCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecC-
Q psy4393 98 LSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD---ESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY- 173 (247)
Q Consensus 98 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~- 173 (247)
++ +..+..+ ..++-.++-|+|.|++++.++.+ |.+-+||..+.+.+..+.+-. .+-..|+|||++++|++.
T Consensus 301 lr-~~~v~df--~egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~i~~~~a~~--tt~~eW~PdGe~flTATTa 375 (566)
T KOG2315|consen 301 LR-GKPVFDF--PEGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRKLIAKFKAAN--TTVFEWSPDGEYFLTATTA 375 (566)
T ss_pred CC-CCEeEeC--CCCCccceEECCCCCEEEEeecCCCCCceEEEeccchhhccccccCC--ceEEEEcCCCcEEEEEecc
Confidence 86 4444444 34556788999999999887764 789999999987777776543 345689999999998874
Q ss_pred -----CCeEEEEeCCCc
Q psy4393 174 -----DGLCRIWDTASG 185 (247)
Q Consensus 174 -----dg~i~v~d~~~~ 185 (247)
|+.++||+....
T Consensus 376 PRlrvdNg~KiwhytG~ 392 (566)
T KOG2315|consen 376 PRLRVDNGIKIWHYTGS 392 (566)
T ss_pred ccEEecCCeEEEEecCc
Confidence 577899987643
No 298
>KOG0882|consensus
Probab=98.86 E-value=3.3e-08 Score=78.25 Aligned_cols=208 Identities=20% Similarity=0.235 Sum_probs=141.8
Q ss_pred CCCCeEEEEECCCCCEEEEEeCCCeEEEEecCC---CeEEEEEecccCCeEEEEECCCCCEEEEEcC-CCeEEEEECCCc
Q psy4393 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD---GKFEKTISGHKLGISDVAWSSDSRLLVSGSD-DKTLKIWELSSG 101 (247)
Q Consensus 26 h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~v~d~~~~ 101 (247)
|...|+-+. ..-.+++.+++.||.++.|--.. -+...-+..|-..+.+++.+-++-.+++.+. |..++++|+.+-
T Consensus 8 hrd~i~hv~-~tka~fiiqASlDGh~KFWkKs~isGvEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvEn~ 86 (558)
T KOG0882|consen 8 HRDVITHVF-PTKAKFIIQASLDGHKKFWKKSRISGVEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDVENF 86 (558)
T ss_pred ccceeeeEe-eehhheEEeeecchhhhhcCCCCccceeehhhhHHHHHHHHhhhccccceeEeeccCcccceeEEEeecc
Confidence 555555443 33467889999999999997543 1222334556677888888889998999777 999999999876
Q ss_pred eEEEEEecCCccEEEEEE-cCCC---CEEEE-eeCCCCEEEEECCCCeE--EEeecCCCCCeEEEEECCCCCEEEEecCC
Q psy4393 102 KCLKTLKGHSNYVFCCNF-NPQS---NLIVS-GSFDESVRIWDVRTGKC--LKTLPAHSDPVSAVHFNRDGSLIVSSSYD 174 (247)
Q Consensus 102 ~~~~~~~~~~~~v~~~~~-~~~~---~~l~~-~~~d~~i~v~d~~~~~~--~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 174 (247)
..+..++...-+= .+.| ...| ..++. .-.++.+.++|-+...+ ...-..|..+|.++.+++.+..+.+....
T Consensus 87 DminmiKL~~lPg-~a~wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~vSiD~~ 165 (558)
T KOG0882|consen 87 DMINMIKLVDLPG-FAEWVTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSAVSIDIS 165 (558)
T ss_pred chhhhcccccCCC-ceEEecCCCCeeeeEEeecccCCCcEEECCcCCcCccceecccccCceEEEEeeccccceeecccc
Confidence 5443333211111 1222 2222 13333 35678899999876542 23345788999999999999999999999
Q ss_pred CeEEEEeCCC-ceeeee---e----------ccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcceEEEEc
Q psy4393 175 GLCRIWDTAS-GQCLKT---L----------IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICS 235 (247)
Q Consensus 175 g~i~v~d~~~-~~~~~~---~----------~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 235 (247)
|.|.-|.... -+.... + .........++.|+|++..+.+-+.|..|++++.++++...++.
T Consensus 166 gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~KtGklvqeiD 240 (558)
T KOG0882|consen 166 GMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVFKTGKLVQEID 240 (558)
T ss_pred ceeEeecCCCcccCccccccccccccchhhcccccccCccceEEccccCcccccCcccEEEEEEeccchhhhhhh
Confidence 9999998763 111111 0 01122345678999999999999999999999999987665543
No 299
>KOG2695|consensus
Probab=98.84 E-value=2.3e-08 Score=76.54 Aligned_cols=156 Identities=18% Similarity=0.301 Sum_probs=111.3
Q ss_pred EECC--CCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCc-----eEEEE
Q psy4393 34 KFSP--NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSG-----KCLKT 106 (247)
Q Consensus 34 ~~s~--~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~-----~~~~~ 106 (247)
+|+- .|-+ ++.+-+..+-+-+.+++.. +.+. ....|.++.|.-.++++..|..+|.|..+|++.. .+...
T Consensus 218 awSlni~gyh-fs~G~sqqv~L~nvetg~~-qsf~-sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~r 294 (425)
T KOG2695|consen 218 AWSLNIMGYH-FSVGLSQQVLLTNVETGHQ-QSFQ-SKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQR 294 (425)
T ss_pred hhhhccceee-ecccccceeEEEEeecccc-cccc-cchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEE
Confidence 5653 2334 3445566677777776643 2332 4556888889888999999999999999999864 23333
Q ss_pred EecCCccEEEEEEcC-CCCEEEEeeCCCCEEEEECCCCeE---EEeecCCCCCe--EEEEECCCCCEEEEecCCCeEEEE
Q psy4393 107 LKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVRTGKC---LKTLPAHSDPV--SAVHFNRDGSLIVSSSYDGLCRIW 180 (247)
Q Consensus 107 ~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~v~d~~~~~~---~~~~~~~~~~i--~~~~~~~~~~~l~~~~~dg~i~v~ 180 (247)
+ -|.+.|.++..-. +++.+.+.+-+|.|++||+|.-++ +....+|-..- .-+.+++....+++++.|...++|
T Consensus 295 l-yh~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiW 373 (425)
T KOG2695|consen 295 L-YHDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIW 373 (425)
T ss_pred E-EcCcchhhhhhhccccceEeeccCcCceeEeeehhhhcccceeeeecccccccccccccccccceEEEccCeeEEEEE
Confidence 3 3667777776655 677888889999999999997665 66666664322 223456666788889999999999
Q ss_pred eCCCceeeeeecc
Q psy4393 181 DTASGQCLKTLID 193 (247)
Q Consensus 181 d~~~~~~~~~~~~ 193 (247)
.++.++.+.++..
T Consensus 374 sl~~ghLl~tipf 386 (425)
T KOG2695|consen 374 SLDSGHLLCTIPF 386 (425)
T ss_pred ecccCceeeccCC
Confidence 9999988776543
No 300
>KOG2114|consensus
Probab=98.83 E-value=1e-06 Score=75.13 Aligned_cols=200 Identities=15% Similarity=0.191 Sum_probs=130.9
Q ss_pred EECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCC-eEEEEECCCCCEEEEEcCCC-----eEEEEECCCc------
Q psy4393 34 KFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSDSRLLVSGSDDK-----TLKIWELSSG------ 101 (247)
Q Consensus 34 ~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~~d~-----~i~v~d~~~~------ 101 (247)
+|++.+..++.|+.+|.|.+++.. -+....+..+... |..+....+.+++++.+.|. .+++|+++..
T Consensus 30 c~~s~~~~vvigt~~G~V~~Ln~s-~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n~sP 108 (933)
T KOG2114|consen 30 CCSSSTGSVVIGTADGRVVILNSS-FQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKNNSP 108 (933)
T ss_pred EEcCCCceEEEeeccccEEEeccc-ceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCCCCc
Confidence 588889999999999999888642 2222445555545 44444444446777766654 5899998642
Q ss_pred eEEE--EEec-----CCccEEEEEEcCCCCEEEEeeCCCCEEEEECCC----CeEEEeecCCCCCeEEEEECCCCCEEEE
Q psy4393 102 KCLK--TLKG-----HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT----GKCLKTLPAHSDPVSAVHFNRDGSLIVS 170 (247)
Q Consensus 102 ~~~~--~~~~-----~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~----~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 170 (247)
.++. .+.. ...++.+++.+.+-+.+|.|-.+|.|..+.-.- +..........++|+.+++..++..++-
T Consensus 109 ~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d~~s~lF 188 (933)
T KOG2114|consen 109 QCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALRSDGKSVLF 188 (933)
T ss_pred ceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeEEecCCceeEE
Confidence 2231 1111 245677888888889999999999998885321 1122223345679999999888876333
Q ss_pred ecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcceEEEEc
Q psy4393 171 SSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICS 235 (247)
Q Consensus 171 ~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 235 (247)
......|.+|.+....+.......++.++.|-.+++....+++++ +..+.+||.+...+-..+.
T Consensus 189 v~Tt~~V~~y~l~gr~p~~~~ld~~G~~lnCss~~~~t~qfIca~-~e~l~fY~sd~~~~cfaf~ 252 (933)
T KOG2114|consen 189 VATTEQVMLYSLSGRTPSLKVLDNNGISLNCSSFSDGTYQFICAG-SEFLYFYDSDGRGPCFAFE 252 (933)
T ss_pred EEecceeEEEEecCCCcceeeeccCCccceeeecCCCCccEEEec-CceEEEEcCCCcceeeeec
Confidence 334567888988754433344556677788888887665455554 4589999987766554444
No 301
>KOG1912|consensus
Probab=98.81 E-value=8.6e-07 Score=74.92 Aligned_cols=205 Identities=19% Similarity=0.253 Sum_probs=136.9
Q ss_pred EEecCCCCeEEEEECCCC------------CEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECC---CC-CEEE
Q psy4393 22 TLAGHTKAVSSVKFSPNG------------EWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS---DS-RLLV 85 (247)
Q Consensus 22 ~~~~h~~~v~~~~~s~~~------------~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~---~~-~~l~ 85 (247)
++.-|...|+.+.|.|-. -+||++...|.|.+||...+.....+..+..++.++.|-+ +. ..++
T Consensus 50 sie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~~~~s~~~~l~~~~~~~qdl~W~~~rd~Srd~Ll 129 (1062)
T KOG1912|consen 50 SIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDFVLASVINWLSHSNDSVQDLCWVPARDDSRDVLL 129 (1062)
T ss_pred ccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEehhhhhhhhhcCCCcchhheeeeeccCcchheeE
Confidence 344588999999998732 1467788889999999988877788888888899999865 33 4566
Q ss_pred EEcCCCeEEEEECCCceEEEEEecCCccEEEEEEcC-CCCEEEEeeCCCCEEEEECC-C------CeEEEeecCCCC---
Q psy4393 86 SGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVR-T------GKCLKTLPAHSD--- 154 (247)
Q Consensus 86 ~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~v~d~~-~------~~~~~~~~~~~~--- 154 (247)
+-.....+.+|+..+|+.............|..++| +...+..-+..|.+-+.+.- . ++..+.-..|..
T Consensus 130 aIh~ss~lvLwntdtG~k~Wk~~ys~~iLs~f~~DPfd~rh~~~l~s~g~vl~~~~l~~sep~~pgk~~qI~sd~Sdl~~ 209 (1062)
T KOG1912|consen 130 AIHGSSTLVLWNTDTGEKFWKYDYSHEILSCFRVDPFDSRHFCVLGSKGFVLSCKDLGLSEPDVPGKEFQITSDHSDLAH 209 (1062)
T ss_pred EecCCcEEEEEEccCCceeeccccCCcceeeeeeCCCCcceEEEEccCceEEEEeccCCCCCCCCceeEEEecCccchhh
Confidence 777778999999999988776666666677788888 33444444444544444331 1 111111111111
Q ss_pred --------------C--------eEEEEECCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCC--CCE
Q psy4393 155 --------------P--------VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPN--GKY 210 (247)
Q Consensus 155 --------------~--------i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~ 210 (247)
+ ....+|+|.-+.++.......+.++|+.-..++....... ..+..+.+-|+ ...
T Consensus 210 lere~at~ns~ts~~~sa~fity~a~faf~p~~rn~lfi~~prellv~dle~~~~l~vvpier-~~akfv~vlP~~~rd~ 288 (1062)
T KOG1912|consen 210 LERETATGNSTTSTPASAYFITYCAQFAFSPHWRNILFITFPRELLVFDLEYECCLAVVPIER-GGAKFVDVLPDPRRDA 288 (1062)
T ss_pred hhhhhhccccccCCCcchhHHHHHHhhhcChhhhceEEEEeccceEEEcchhhceeEEEEecc-CCcceeEeccCCCcce
Confidence 0 1124567766555555567789999998777766553332 23455666665 458
Q ss_pred EEEEEcCCeEEEEECCC
Q psy4393 211 ILAATLDNTLKLWDSKV 227 (247)
Q Consensus 211 l~~~~~dg~i~vwd~~~ 227 (247)
|++...||.+.+|-.+.
T Consensus 289 LfclH~nG~ltirvrk~ 305 (1062)
T KOG1912|consen 289 LFCLHSNGRLTIRVRKE 305 (1062)
T ss_pred EEEEecCCeEEEEEeec
Confidence 99999999999997654
No 302
>KOG0309|consensus
Probab=98.81 E-value=6.9e-08 Score=80.88 Aligned_cols=214 Identities=24% Similarity=0.367 Sum_probs=140.4
Q ss_pred CCCCCCCceEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecc--cCCeEEEEECCCC---CEE
Q psy4393 10 SSNPKPNYVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH--KLGISDVAWSSDS---RLL 84 (247)
Q Consensus 10 ~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~--~~~v~~~~~~~~~---~~l 84 (247)
+|=..|.+-...++.. .+++.++..+|.|+-++.++.-|. .+-|+.+.-.....-.| .-.|....|+|.. ..+
T Consensus 8 gpyns~tf~kslsl~v-~~~~~a~si~p~grdi~lAsr~gl-~i~dld~p~~ppr~l~h~tpw~vad~qws~h~a~~~wi 85 (1081)
T KOG0309|consen 8 GPYNSPTFGKSLSLKV-DGGFNAVSINPSGRDIVLASRQGL-YIIDLDDPFTPPRWLHHITPWQVADVQWSPHPAKPYWI 85 (1081)
T ss_pred CCCCCCccCceeEEEe-cCcccceeeccccchhhhhhhcCe-EEEeccCCCCCceeeeccCcchhcceecccCCCCceeE
Confidence 3334444555555542 467888899999999998888774 45555443221111112 2236677887742 234
Q ss_pred EEEcCCCeEEEEECCCc---eEEEEEecCCccEEEEEEcCCC-CEEEEeeCCCCEEEEECCCCe-EEEeecCCCCCeEEE
Q psy4393 85 VSGSDDKTLKIWELSSG---KCLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVRTGK-CLKTLPAHSDPVSAV 159 (247)
Q Consensus 85 ~~~~~d~~i~v~d~~~~---~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~v~d~~~~~-~~~~~~~~~~~i~~~ 159 (247)
++.+. ..-.+|++... ..-..+.+|...+..+.|+|+. ..+++++.|..++.||+++.. ++..+..-......+
T Consensus 86 Vsts~-qkaiiwnlA~ss~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~asqV 164 (1081)
T KOG0309|consen 86 VSTSN-QKAIIWNLAKSSSNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQV 164 (1081)
T ss_pred EecCc-chhhhhhhhcCCccceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCcceeeeecccccCcee
Confidence 54444 34447887543 2233456788889999999865 578899999999999999864 344444334456778
Q ss_pred EECCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECC-CCCEEEEEEcCCeEEEEECC
Q psy4393 160 HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP-NGKYILAATLDNTLKLWDSK 226 (247)
Q Consensus 160 ~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~vwd~~ 226 (247)
+|+.....+.+.+....+.+||.+.+.........+...+..++|.- -...+.+.+.||+|++||..
T Consensus 165 kwnyk~p~vlasshg~~i~vwd~r~gs~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~ 232 (1081)
T KOG0309|consen 165 KWNYKDPNVLASSHGNDIFVWDLRKGSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYS 232 (1081)
T ss_pred eecccCcchhhhccCCceEEEeccCCCcceEEecccceeeehHHHhhhhhhhhcccCCCCceeeeccc
Confidence 99876666666677788999999987654444444556677777653 23467888899999999864
No 303
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=98.81 E-value=2.3e-08 Score=53.14 Aligned_cols=38 Identities=37% Similarity=0.868 Sum_probs=35.8
Q ss_pred eEEEeecCCCCCeEEEEECCCCCEEEEecCCCeEEEEe
Q psy4393 144 KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181 (247)
Q Consensus 144 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d 181 (247)
+++..+..|.++|.+++|+|++.+|++++.|+.|++||
T Consensus 2 ~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 2 KCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred eEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 56788899999999999999999999999999999997
No 304
>KOG2041|consensus
Probab=98.80 E-value=4.2e-08 Score=81.93 Aligned_cols=157 Identities=17% Similarity=0.301 Sum_probs=121.4
Q ss_pred cCCeEEEEECCCCCEEEEEcCCCeEEEEECCCce---------------EEEEEecCCccEEEEEEcCCCCEEEEeeCCC
Q psy4393 69 KLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGK---------------CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 133 (247)
Q Consensus 69 ~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~---------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 133 (247)
.....++.|+....+|++|+.||.+++..+.+.. .-+.+.+|...|.-+.|+.+.+.+.+...+|
T Consensus 14 nvkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt~G 93 (1189)
T KOG2041|consen 14 NVKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDTSG 93 (1189)
T ss_pred CceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCCCc
Confidence 3457889999999999999999999999875421 1234678999999999999999999999999
Q ss_pred CEEEEECCCCeEEEeec--CCCCCeEEEEECCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEE
Q psy4393 134 SVRIWDVRTGKCLKTLP--AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 211 (247)
Q Consensus 134 ~i~v~d~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 211 (247)
.|.+|-+..++-...+. ...+.|.+|+|+.+|..++....||.|.+=.++.++....-. .......+.|++|.+.+
T Consensus 94 lIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvdGNRIwgKeL--kg~~l~hv~ws~D~~~~ 171 (1189)
T KOG2041|consen 94 LIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVDGNRIWGKEL--KGQLLAHVLWSEDLEQA 171 (1189)
T ss_pred eEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeeccceecchhc--chheccceeecccHHHH
Confidence 99999998776433322 224568899999999999999999988776665543221111 12234568899999999
Q ss_pred EEEEcCCeEEEEECCC
Q psy4393 212 LAATLDNTLKLWDSKV 227 (247)
Q Consensus 212 ~~~~~dg~i~vwd~~~ 227 (247)
+.+-..|.+++||.+.
T Consensus 172 Lf~~ange~hlydnqg 187 (1189)
T KOG2041|consen 172 LFKKANGETHLYDNQG 187 (1189)
T ss_pred HhhhcCCcEEEecccc
Confidence 9999999999999653
No 305
>KOG0309|consensus
Probab=98.76 E-value=1.5e-07 Score=78.95 Aligned_cols=207 Identities=22% Similarity=0.337 Sum_probs=133.5
Q ss_pred EEEEEecCCCCeEEEEECCCCC-EEEEEeCCCeEEEEecCCCeE-EEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEE
Q psy4393 19 LKFTLAGHTKAVSSVKFSPNGE-WLASSSADKLIKIWGAYDGKF-EKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIW 96 (247)
Q Consensus 19 ~~~~~~~h~~~v~~~~~s~~~~-~l~~~~~dg~v~iw~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~ 96 (247)
..+-+.+|.+.|+.+-|.|... .+++++.|-.+..||+..... .........+...+.|+-..-.+++.+....+++|
T Consensus 106 Ief~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~p~vlasshg~~i~vw 185 (1081)
T KOG0309|consen 106 IEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPNVLASSHGNDIFVW 185 (1081)
T ss_pred eEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCcceeeeecccccCceeeecccCcchhhhccCCceEEE
Confidence 4567789999999999999655 788999999999999976543 33444445556778898755556666777889999
Q ss_pred ECCCc-eEEEEEecCCccEEEEEEcCC-CCEEEEeeCCCCEEEEECCCCeEE-EeecCCCCCeEEEEECCCCCEEEEec-
Q psy4393 97 ELSSG-KCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVRTGKCL-KTLPAHSDPVSAVHFNRDGSLIVSSS- 172 (247)
Q Consensus 97 d~~~~-~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~v~d~~~~~~~-~~~~~~~~~i~~~~~~~~~~~l~~~~- 172 (247)
|.+.+ ..+..+++|...+..++|+.- ...+.+.+.|+.++.||....... .....-..++..-++.|=|+-.+.--
T Consensus 186 d~r~gs~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~e~~~~vtt~~piw~~r~~Pfg~g~~~mp~ 265 (1081)
T KOG0309|consen 186 DLRKGSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTTESKRTVTTNFPIWRGRYLPFGEGYCIMPM 265 (1081)
T ss_pred eccCCCcceEEecccceeeehHHHhhhhhhhhcccCCCCceeeecccccccccceeccccCcceeccccccCceeEeccc
Confidence 99875 567788888888888888652 346778889999999998644321 12222344666666666444222111
Q ss_pred -CCCeEEEEeCC---------Cc-eeeeeeccCCCCCeEEEEEC--------CC--CCEEEEEEcCCeEEEEECC
Q psy4393 173 -YDGLCRIWDTA---------SG-QCLKTLIDDDNPPVSFVKFS--------PN--GKYILAATLDNTLKLWDSK 226 (247)
Q Consensus 173 -~dg~i~v~d~~---------~~-~~~~~~~~~~~~~v~~~~~s--------~~--~~~l~~~~~dg~i~vwd~~ 226 (247)
.+..+.+++-+ ++ +.+.++. +|...|....|- -| .=.|++-+.|..+++|-+.
T Consensus 266 ~G~n~v~~~~c~n~d~e~n~~~~~~pVh~F~-GH~D~V~eFlWR~r~e~~~d~d~rdfQLVTWSkD~~lrlWpI~ 339 (1081)
T KOG0309|consen 266 VGGNMVPQLRCENSDLEWNVFDLNTPVHTFV-GHDDVVLEFLWRKRKECDGDYDSRDFQLVTWSKDQTLRLWPID 339 (1081)
T ss_pred cCCeeeeeccccchhhhhccccCCcceeeec-CcchHHHHHhhhhcccccCCCCccceeEEEeecCCceEeeecc
Confidence 12233333332 22 2233332 232233222222 12 2278999999999999764
No 306
>KOG0882|consensus
Probab=98.76 E-value=3.2e-07 Score=72.81 Aligned_cols=212 Identities=17% Similarity=0.141 Sum_probs=144.9
Q ss_pred cCCCCeEEEEECCCCCEEEEEeC-CCeEEEEecCCCeEEEEEecccCC-eEEEEECCCC--CEE-EEEcCCCeEEEEECC
Q psy4393 25 GHTKAVSSVKFSPNGEWLASSSA-DKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSDS--RLL-VSGSDDKTLKIWELS 99 (247)
Q Consensus 25 ~h~~~v~~~~~s~~~~~l~~~~~-dg~v~iw~~~~~~~~~~~~~~~~~-v~~~~~~~~~--~~l-~~~~~d~~i~v~d~~ 99 (247)
.|-+.|.+++.+.+|.++.+.+. |..++++|+++-.....+.....+ ..+...++.. ..+ ++.-.++.+.++|-.
T Consensus 51 aHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvEn~DminmiKL~~lPg~a~wv~skGd~~s~IAVs~~~sg~i~VvD~~ 130 (558)
T KOG0882|consen 51 AHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDVENFDMINMIKLVDLPGFAEWVTSKGDKISLIAVSLFKSGKIFVVDGF 130 (558)
T ss_pred HHHHHHHhhhccccceeEeeccCcccceeEEEeeccchhhhcccccCCCceEEecCCCCeeeeEEeecccCCCcEEECCc
Confidence 56677888899999998888666 999999998776554443322222 1122223321 123 334457899999976
Q ss_pred Cce-EE-EEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCC------CeEE---------EeecCCCCCeEEEEEC
Q psy4393 100 SGK-CL-KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT------GKCL---------KTLPAHSDPVSAVHFN 162 (247)
Q Consensus 100 ~~~-~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~------~~~~---------~~~~~~~~~i~~~~~~ 162 (247)
... .. ..-+-|..+|.++.+++.+..+++....|.|.-|.... .... ..+........++.++
T Consensus 131 ~d~~q~~~fkklH~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efs 210 (558)
T KOG0882|consen 131 GDFCQDGYFKKLHFSPVKKIRYNQAGDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFS 210 (558)
T ss_pred CCcCccceecccccCceEEEEeeccccceeeccccceeEeecCCCcccCccccccccccccchhhcccccccCccceEEc
Confidence 443 22 22345778999999999999999999999999998762 1111 1112223456789999
Q ss_pred CCCCEEEEecCCCeEEEEeCCCceeeeeec--------------------------------cCCCCCeEEEEECCCCCE
Q psy4393 163 RDGSLIVSSSYDGLCRIWDTASGQCLKTLI--------------------------------DDDNPPVSFVKFSPNGKY 210 (247)
Q Consensus 163 ~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~--------------------------------~~~~~~v~~~~~s~~~~~ 210 (247)
|++..+.+-+.|..|++++..+++..+.+- .......+.+.|+..|++
T Consensus 211 p~g~qistl~~DrkVR~F~~KtGklvqeiDE~~t~~~~q~ks~y~l~~VelgRRmaverelek~~~~~~~~~~fdes~~f 290 (558)
T KOG0882|consen 211 PDGAQISTLNPDRKVRGFVFKTGKLVQEIDEVLTDAQYQPKSPYGLMHVELGRRMAVERELEKHGSTVGTNAVFDESGNF 290 (558)
T ss_pred cccCcccccCcccEEEEEEeccchhhhhhhccchhhhhccccccccceeehhhhhhHHhhHhhhcCcccceeEEcCCCCE
Confidence 999999999999999999999876433220 011223456789999999
Q ss_pred EEEEEcCCeEEEEECCCcceEEEEccC
Q psy4393 211 ILAATLDNTLKLWDSKVVTPAIICSTP 237 (247)
Q Consensus 211 l~~~~~dg~i~vwd~~~~~~~~~~~~~ 237 (247)
|+.++-= -|+|.++.+.+...++...
T Consensus 291 lly~t~~-gikvin~~tn~v~ri~gk~ 316 (558)
T KOG0882|consen 291 LLYGTIL-GIKVINLDTNTVVRILGKD 316 (558)
T ss_pred EEeecce-eEEEEEeecCeEEEEeccc
Confidence 9998754 4788888888887776553
No 307
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=98.73 E-value=6.7e-06 Score=62.49 Aligned_cols=179 Identities=18% Similarity=0.147 Sum_probs=111.9
Q ss_pred CCeEEEEecCCCeEEEEEecccCCeEEEE--ECCCCCEEEEEcCCCeEEEEECCCceEEEEEecCCccEEEEEEcCCCCE
Q psy4393 48 DKLIKIWGAYDGKFEKTISGHKLGISDVA--WSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNL 125 (247)
Q Consensus 48 dg~v~iw~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 125 (247)
+|.|..||..+++......... ...... ..+++..+++++.++.+..||..+|+.+........ +.... ...+..
T Consensus 2 ~g~l~~~d~~tG~~~W~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~~~~-~~~~~-~~~~~~ 78 (238)
T PF13360_consen 2 DGTLSALDPRTGKELWSYDLGP-GIGGPVATAVPDGGRVYVASGDGNLYALDAKTGKVLWRFDLPGP-ISGAP-VVDGGR 78 (238)
T ss_dssp TSEEEEEETTTTEEEEEEECSS-SCSSEEETEEEETTEEEEEETTSEEEEEETTTSEEEEEEECSSC-GGSGE-EEETTE
T ss_pred CCEEEEEECCCCCEEEEEECCC-CCCCccceEEEeCCEEEEEcCCCEEEEEECCCCCEEEEeecccc-cccee-eecccc
Confidence 6788999998998887775311 111112 223567788888999999999999988776654221 11111 223456
Q ss_pred EEEeeCCCCEEEEECCCCeEEEee-cCCC---CCeEEEEECCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCC---C
Q psy4393 126 IVSGSFDESVRIWDVRTGKCLKTL-PAHS---DPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP---P 198 (247)
Q Consensus 126 l~~~~~d~~i~v~d~~~~~~~~~~-~~~~---~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~---~ 198 (247)
++.+..++.++.+|..+|+.+... .... .....+....++..++++..++.+..+|+++|+.+-........ .
T Consensus 79 v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~ 158 (238)
T PF13360_consen 79 VYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPVGEPRGSSP 158 (238)
T ss_dssp EEEEETTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEESSTT-SS--
T ss_pred cccccceeeeEecccCCcceeeeeccccccccccccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeecCCCCCCcc
Confidence 666678889999999999988773 3221 11122223334777888888999999999999876555332211 1
Q ss_pred e------EEEEECCCCCEEEEEEcCCe-EEEEECCCcceE
Q psy4393 199 V------SFVKFSPNGKYILAATLDNT-LKLWDSKVVTPA 231 (247)
Q Consensus 199 v------~~~~~s~~~~~l~~~~~dg~-i~vwd~~~~~~~ 231 (247)
+ ..-....++ .++.++.++. +.+ |..++..+
T Consensus 159 ~~~~~~~~~~~~~~~~-~v~~~~~~g~~~~~-d~~tg~~~ 196 (238)
T PF13360_consen 159 ISSFSDINGSPVISDG-RVYVSSGDGRVVAV-DLATGEKL 196 (238)
T ss_dssp EEEETTEEEEEECCTT-EEEEECCTSSEEEE-ETTTTEEE
T ss_pred eeeecccccceEEECC-EEEEEcCCCeEEEE-ECCCCCEE
Confidence 1 122222344 6777777775 555 88887744
No 308
>KOG1920|consensus
Probab=98.69 E-value=1.1e-05 Score=71.61 Aligned_cols=198 Identities=17% Similarity=0.231 Sum_probs=128.7
Q ss_pred CCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEEC----CC---
Q psy4393 28 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWEL----SS--- 100 (247)
Q Consensus 28 ~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~----~~--- 100 (247)
..|.++.|..+++-++.+...|.|.+-|.++.... ....-..+|.+++|+||++.++..+..+++.+-+- -.
T Consensus 69 ~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~~e-ivg~vd~GI~aaswS~Dee~l~liT~~~tll~mT~~f~~i~E~~ 147 (1265)
T KOG1920|consen 69 DEIVSVQFLADTNSICVITALGDIILVDPETLELE-IVGNVDNGISAASWSPDEELLALITGRQTLLFMTKDFEPIAEKP 147 (1265)
T ss_pred cceEEEEEecccceEEEEecCCcEEEEccccccee-eeeeccCceEEEeecCCCcEEEEEeCCcEEEEEeccccchhccc
Confidence 58999999999998888899999999887654432 23334678999999999999988888777755332 00
Q ss_pred ----------------ceEEEEEecCC---------------------ccEEEEEEcCCCCEEEEe-----eCCCCEEEE
Q psy4393 101 ----------------GKCLKTLKGHS---------------------NYVFCCNFNPQSNLIVSG-----SFDESVRIW 138 (247)
Q Consensus 101 ----------------~~~~~~~~~~~---------------------~~v~~~~~~~~~~~l~~~-----~~d~~i~v~ 138 (247)
|+....+++.. +.-..++|-.||.++|+. ...+.+++|
T Consensus 148 L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~~~~RkirV~ 227 (1265)
T KOG1920|consen 148 LDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYFAVSFVESETGTRKIRVY 227 (1265)
T ss_pred cccccccccccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCCcEEEEEEEeccCCceeEEEe
Confidence 00001122111 111247899999999883 333789999
Q ss_pred ECCCCeEEEeecCCCCCeEEEEECCCCCEEEEec---CCCeEEEEeCCCceeeeee---ccCCCCCeEEEEECCCCCEEE
Q psy4393 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSS---YDGLCRIWDTASGQCLKTL---IDDDNPPVSFVKFSPNGKYIL 212 (247)
Q Consensus 139 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~---~dg~i~v~d~~~~~~~~~~---~~~~~~~v~~~~~s~~~~~l~ 212 (247)
|-. |..-..-....+--.+++|-|.|.++++.. .|+.|.+|.- +|-....+ .......+..++|+.++..|+
T Consensus 228 drE-g~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffEr-NGL~hg~f~l~~p~de~~ve~L~Wns~sdiLA 305 (1265)
T KOG1920|consen 228 DRE-GALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFER-NGLRHGEFVLPFPLDEKEVEELAWNSNSDILA 305 (1265)
T ss_pred ccc-chhhcccCcccccccceeecCCCCeEeeeeecCCCCcEEEEec-CCccccccccCCcccccchheeeecCCCCcee
Confidence 976 432222122233345789999999888754 3556777753 33222222 122233488999999999998
Q ss_pred E---EEcCCeEEEEECCCc
Q psy4393 213 A---ATLDNTLKLWDSKVV 228 (247)
Q Consensus 213 ~---~~~dg~i~vwd~~~~ 228 (247)
. ......|++|-....
T Consensus 306 v~~~~~e~~~v~lwt~~Ny 324 (1265)
T KOG1920|consen 306 VVTSNLENSLVQLWTTGNY 324 (1265)
T ss_pred eeecccccceEEEEEecCe
Confidence 8 444456999987653
No 309
>KOG1920|consensus
Probab=98.68 E-value=6.9e-06 Score=72.72 Aligned_cols=159 Identities=15% Similarity=0.349 Sum_probs=103.7
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCeEEEEec----CC-------------------CeEEEEEeccc--------------
Q psy4393 27 TKAVSSVKFSPNGEWLASSSADKLIKIWGA----YD-------------------GKFEKTISGHK-------------- 69 (247)
Q Consensus 27 ~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~----~~-------------------~~~~~~~~~~~-------------- 69 (247)
..+|.+++|+||++.++..+..+++.+.+. .. |+....+.+..
T Consensus 109 d~GI~aaswS~Dee~l~liT~~~tll~mT~~f~~i~E~~L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~ 188 (1265)
T KOG1920|consen 109 DNGISAASWSPDEELLALITGRQTLLFMTKDFEPIAEKPLDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKA 188 (1265)
T ss_pred cCceEEEeecCCCcEEEEEeCCcEEEEEeccccchhccccccccccccccceecccccceeeecchhhhccccccccccc
Confidence 467999999999999998888888877542 10 11111222111
Q ss_pred -------CCeEEEEECCCCCEEEE-----EcCCCeEEEEECCCceEEEEEecCCccEEEEEEcCCCCEEEEee---CCCC
Q psy4393 70 -------LGISDVAWSSDSRLLVS-----GSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS---FDES 134 (247)
Q Consensus 70 -------~~v~~~~~~~~~~~l~~-----~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~d~~ 134 (247)
..=+.+.|.-||+++++ ......+++||-+ +.....-......-.+++|-|.|.++++-. .++.
T Consensus 189 ~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~~~~RkirV~drE-g~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~ 267 (1265)
T KOG1920|consen 189 LEQIEQDDHKTSISWRGDGEYFAVSFVESETGTRKIRVYDRE-GALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSD 267 (1265)
T ss_pred ccchhhccCCceEEEccCCcEEEEEEEeccCCceeEEEeccc-chhhcccCcccccccceeecCCCCeEeeeeecCCCCc
Confidence 11234889999999887 3333799999976 433222222223345789999999998853 4556
Q ss_pred EEEEECCC---CeEEEeecCCCCCeEEEEECCCCCEEEE---ecCCCeEEEEeCCCce
Q psy4393 135 VRIWDVRT---GKCLKTLPAHSDPVSAVHFNRDGSLIVS---SSYDGLCRIWDTASGQ 186 (247)
Q Consensus 135 i~v~d~~~---~~~~~~~~~~~~~i~~~~~~~~~~~l~~---~~~dg~i~v~d~~~~~ 186 (247)
|.+|.-+. +.-.-.++.....+..++|+.++..|++ ......|.+|-..+..
T Consensus 268 IvffErNGL~hg~f~l~~p~de~~ve~L~Wns~sdiLAv~~~~~e~~~v~lwt~~Nyh 325 (1265)
T KOG1920|consen 268 IVFFERNGLRHGEFVLPFPLDEKEVEELAWNSNSDILAVVTSNLENSLVQLWTTGNYH 325 (1265)
T ss_pred EEEEecCCccccccccCCcccccchheeeecCCCCceeeeecccccceEEEEEecCeE
Confidence 88887532 2222223444455899999999999987 4455569999888754
No 310
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=98.68 E-value=7.1e-07 Score=73.29 Aligned_cols=76 Identities=24% Similarity=0.388 Sum_probs=62.8
Q ss_pred CCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCCCeEEEEeCCCcee
Q psy4393 110 HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC 187 (247)
Q Consensus 110 ~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~ 187 (247)
..+.+.+++++|+...++.|+.||.|.+||...+..... ...-..+.++|+|+|..+++|+..|.+.+||+.-...
T Consensus 258 L~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~~~--ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~ALspi 333 (545)
T PF11768_consen 258 LPSQVICCARSPSEDKLVLGCEDGSIILYDTTRGVTLLA--KAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMALSPI 333 (545)
T ss_pred cCCcceEEecCcccceEEEEecCCeEEEEEcCCCeeeee--eecccceEEEEcCCCcEEEEEcCCceEEEEEeecCcc
Confidence 456788999999999999999999999999987643322 2234567899999999999999999999999876543
No 311
>KOG2066|consensus
Probab=98.67 E-value=8.1e-06 Score=69.36 Aligned_cols=154 Identities=24% Similarity=0.327 Sum_probs=105.4
Q ss_pred EEecCCCCeEEEEECCC-------------CCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCC-----CCE
Q psy4393 22 TLAGHTKAVSSVKFSPN-------------GEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD-----SRL 83 (247)
Q Consensus 22 ~~~~h~~~v~~~~~s~~-------------~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~-----~~~ 83 (247)
-+..|.+.|.-..+.-+ |+++++|+.||.|.|-.+.+.+...... ...++.+++++|+ .+.
T Consensus 53 ~~GtH~g~v~~~~~~~~~~~~~~~s~~~~~Gey~asCS~DGkv~I~sl~~~~~~~~~d-f~rpiksial~Pd~~~~~sk~ 131 (846)
T KOG2066|consen 53 ALGTHRGAVYLTTCQGNPKTNFDHSSSILEGEYVASCSDDGKVVIGSLFTDDEITQYD-FKRPIKSIALHPDFSRQQSKQ 131 (846)
T ss_pred eeccccceEEEEecCCcccccccccccccCCceEEEecCCCcEEEeeccCCccceeEe-cCCcceeEEeccchhhhhhhh
Confidence 34456666666555444 9999999999999999887776555444 3567899999997 457
Q ss_pred EEEEcCCCeEEEEECC---CceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCe----
Q psy4393 84 LVSGSDDKTLKIWELS---SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPV---- 156 (247)
Q Consensus 84 l~~~~~d~~i~v~d~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i---- 156 (247)
+++|+..| +.++.-. ....+ .+....+.|.++.|. |+++|-++.+| +++||+..++.+..++.....+
T Consensus 132 fv~GG~ag-lvL~er~wlgnk~~v-~l~~~eG~I~~i~W~--g~lIAWand~G-v~vyd~~~~~~l~~i~~p~~~~R~e~ 206 (846)
T KOG2066|consen 132 FVSGGMAG-LVLSERNWLGNKDSV-VLSEGEGPIHSIKWR--GNLIAWANDDG-VKVYDTPTRQRLTNIPPPSQSVRPEL 206 (846)
T ss_pred eeecCcce-EEEehhhhhcCccce-eeecCccceEEEEec--CcEEEEecCCC-cEEEeccccceeeccCCCCCCCCccc
Confidence 88998888 6666522 11111 345567889999997 67888877655 8999999888776665433322
Q ss_pred --EEEEECCCCCEEEEecCCCeEEEEeCC
Q psy4393 157 --SAVHFNRDGSLIVSSSYDGLCRIWDTA 183 (247)
Q Consensus 157 --~~~~~~~~~~~l~~~~~dg~i~v~d~~ 183 (247)
..+.|.++.+ |+. |+..+|++..++
T Consensus 207 fpphl~W~~~~~-LVI-GW~d~v~i~~I~ 233 (846)
T KOG2066|consen 207 FPPHLHWQDEDR-LVI-GWGDSVKICSIK 233 (846)
T ss_pred CCCceEecCCCe-EEE-ecCCeEEEEEEe
Confidence 2456766554 343 455667777666
No 312
>KOG2314|consensus
Probab=98.67 E-value=3.1e-06 Score=69.01 Aligned_cols=178 Identities=14% Similarity=0.230 Sum_probs=115.0
Q ss_pred EEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcC-----------CCeEEEEECC
Q psy4393 31 SSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSD-----------DKTLKIWELS 99 (247)
Q Consensus 31 ~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----------d~~i~v~d~~ 99 (247)
+=+.|||-|.+|++--..| |.+|.-.+-...+.+. ...|.-+.|+|..++|+|-+. ...+.|||+.
T Consensus 214 tyv~wSP~GTYL~t~Hk~G-I~lWGG~~f~r~~RF~--Hp~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~ 290 (698)
T KOG2314|consen 214 TYVRWSPKGTYLVTFHKQG-IALWGGESFDRIQRFY--HPGVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDIA 290 (698)
T ss_pred eeEEecCCceEEEEEeccc-eeeecCccHHHHHhcc--CCCceeeecCCccceEEEecCCccccCcccCCCceEEEEEcc
Confidence 3478999999999876555 7889655433333332 345888999999999988642 2579999999
Q ss_pred CceEEEEEecCC---ccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecC--C
Q psy4393 100 SGKCLKTLKGHS---NYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY--D 174 (247)
Q Consensus 100 ~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--d 174 (247)
+|...+.+.... ..-.-..|+.+++++|.-.. ..|.+|+..+...+..-...-..|....|+|.+.+||-=.. +
T Consensus 291 tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~-~sisIyEtpsf~lld~Kslki~gIr~FswsP~~~llAYwtpe~~ 369 (698)
T KOG2314|consen 291 TGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTG-NSISIYETPSFMLLDKKSLKISGIRDFSWSPTSNLLAYWTPETN 369 (698)
T ss_pred ccchhcceeccCCCccccceEEeccCCceeEEecc-ceEEEEecCceeeecccccCCccccCcccCCCcceEEEEccccc
Confidence 998777665422 22344689999999998765 56889987764433322233346778889998887764221 1
Q ss_pred ---CeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEE
Q psy4393 175 ---GLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILA 213 (247)
Q Consensus 175 ---g~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 213 (247)
..+.+-.+.+++.++.....+-. =..+-|-.+|.+|+.
T Consensus 370 ~~parvtL~evPs~~~iRt~nlfnVs-DckLhWQk~gdyLcv 410 (698)
T KOG2314|consen 370 NIPARVTLMEVPSKREIRTKNLFNVS-DCKLHWQKSGDYLCV 410 (698)
T ss_pred CCcceEEEEecCccceeeeccceeee-ccEEEeccCCcEEEE
Confidence 23445555555444332111111 123567788888865
No 313
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=98.66 E-value=3.5e-06 Score=69.14 Aligned_cols=185 Identities=21% Similarity=0.211 Sum_probs=112.4
Q ss_pred CCCeEEEEECCCCCEEEEEe---CC-CeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEE-EcCCC--eEEEEECC
Q psy4393 27 TKAVSSVKFSPNGEWLASSS---AD-KLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVS-GSDDK--TLKIWELS 99 (247)
Q Consensus 27 ~~~v~~~~~s~~~~~l~~~~---~d-g~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d~--~i~v~d~~ 99 (247)
...+...+|+|++..++... .. ..+.+++..++.....+. ....-...+|+|||++++- ...|+ .|.++|+.
T Consensus 192 ~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~-~~g~~~~P~fspDG~~l~f~~~rdg~~~iy~~dl~ 270 (425)
T COG0823 192 GSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILN-FNGNNGAPAFSPDGSKLAFSSSRDGSPDIYLMDLD 270 (425)
T ss_pred CcceeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeec-cCCccCCccCCCCCCEEEEEECCCCCccEEEEcCC
Confidence 45677889999999776532 22 358888888776555544 2333445689999998764 44555 46666777
Q ss_pred CceEEEEEecCCccEEEEEEcCCCCEEEEeeC-CCC--EEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecC-CC
Q psy4393 100 SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF-DES--VRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY-DG 175 (247)
Q Consensus 100 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~--i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-dg 175 (247)
.+.. ..+....+.-..-.|+|+|+.++..+. .|. |.++|+..+.. ..+....+.-..-.|+|||++++..+. +|
T Consensus 271 ~~~~-~~Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~-~riT~~~~~~~~p~~SpdG~~i~~~~~~~g 348 (425)
T COG0823 271 GKNL-PRLTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQV-TRLTFSGGGNSNPVWSPDGDKIVFESSSGG 348 (425)
T ss_pred CCcc-eecccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCce-eEeeccCCCCcCccCCCCCCEEEEEeccCC
Confidence 6653 334444443346689999999887654 343 66667765544 333322222236689999998887664 34
Q ss_pred e--EEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEc
Q psy4393 176 L--CRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATL 216 (247)
Q Consensus 176 ~--i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~ 216 (247)
. |.+.|+.++...+.+. .......-.|.|+++.++..+.
T Consensus 349 ~~~i~~~~~~~~~~~~~lt--~~~~~e~ps~~~ng~~i~~~s~ 389 (425)
T COG0823 349 QWDIDKNDLASGGKIRILT--STYLNESPSWAPNGRMIMFSSG 389 (425)
T ss_pred ceeeEEeccCCCCcEEEcc--ccccCCCCCcCCCCceEEEecc
Confidence 4 6666766554322221 1122233457777777765543
No 314
>KOG2314|consensus
Probab=98.65 E-value=6.9e-06 Score=67.09 Aligned_cols=195 Identities=15% Similarity=0.222 Sum_probs=116.0
Q ss_pred EEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCC-----CeEEEEECCCceEEEE
Q psy4393 32 SVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDD-----KTLKIWELSSGKCLKT 106 (247)
Q Consensus 32 ~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~v~d~~~~~~~~~ 106 (247)
-+.||.|++++|.... ..|.||+...-.....-.-...+|..+.|+|.++.||.=... ..+.+..+.+++.++.
T Consensus 310 ~frWS~DdKy~Arm~~-~sisIyEtpsf~lld~Kslki~gIr~FswsP~~~llAYwtpe~~~~parvtL~evPs~~~iRt 388 (698)
T KOG2314|consen 310 IFRWSHDDKYFARMTG-NSISIYETPSFMLLDKKSLKISGIRDFSWSPTSNLLAYWTPETNNIPARVTLMEVPSKREIRT 388 (698)
T ss_pred eEEeccCCceeEEecc-ceEEEEecCceeeecccccCCccccCcccCCCcceEEEEcccccCCcceEEEEecCccceeee
Confidence 3679999999987665 468888865433322222334568899999998888753321 2466666666655544
Q ss_pred EecCCccEEEEEEcCCCCEEEEe----------eCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecC---
Q psy4393 107 LKGHSNYVFCCNFNPQSNLIVSG----------SFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY--- 173 (247)
Q Consensus 107 ~~~~~~~v~~~~~~~~~~~l~~~----------~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--- 173 (247)
..-+.-.=..+.|-.+|.+|..- +.-..+.++.++.....-..-.-...+...+|.|.|..+++-+.
T Consensus 389 ~nlfnVsDckLhWQk~gdyLcvkvdR~tK~~~~g~f~n~eIfrireKdIpve~velke~vi~FaWEP~gdkF~vi~g~~~ 468 (698)
T KOG2314|consen 389 KNLFNVSDCKLHWQKSGDYLCVKVDRHTKSKVKGQFSNLEIFRIREKDIPVEVVELKESVIAFAWEPHGDKFAVISGNTV 468 (698)
T ss_pred ccceeeeccEEEeccCCcEEEEEEEeeccccccceEeeEEEEEeeccCCCceeeecchheeeeeeccCCCeEEEEEcccc
Confidence 32221111234555666665532 11123455555543321111122456788899999987766443
Q ss_pred CCeEEEEeCCCc-eeeeeeccCCCCCeEEEEECCCCCEEEEEE---cCCeEEEEECCC
Q psy4393 174 DGLCRIWDTASG-QCLKTLIDDDNPPVSFVKFSPNGKYILAAT---LDNTLKLWDSKV 227 (247)
Q Consensus 174 dg~i~v~d~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~---~dg~i~vwd~~~ 227 (247)
...+.+|.+.+. ........-.....+.+.|+|.|++++.+. ..|.+.++|..-
T Consensus 469 k~tvsfY~~e~~~~~~~lVk~~dk~~~N~vfwsPkG~fvvva~l~s~~g~l~F~D~~~ 526 (698)
T KOG2314|consen 469 KNTVSFYAVETNIKKPSLVKELDKKFANTVFWSPKGRFVVVAALVSRRGDLEFYDTDY 526 (698)
T ss_pred ccceeEEEeecCCCchhhhhhhcccccceEEEcCCCcEEEEEEecccccceEEEecch
Confidence 346888877632 111111111223457799999999998765 468999999874
No 315
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=98.58 E-value=0.00022 Score=58.24 Aligned_cols=202 Identities=14% Similarity=0.164 Sum_probs=137.8
Q ss_pred EEEEECCCCCEEEEE-eCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcC---CCeEEEEECCCceEEEE
Q psy4393 31 SSVKFSPNGEWLASS-SADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSD---DKTLKIWELSSGKCLKT 106 (247)
Q Consensus 31 ~~~~~s~~~~~l~~~-~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~v~d~~~~~~~~~ 106 (247)
..++.++.+..++.. ..++.|.+.|.............. ....++++|+++.+..+.. ++.+.+.|..+.+....
T Consensus 77 ~~i~v~~~~~~vyv~~~~~~~v~vid~~~~~~~~~~~vG~-~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~ 155 (381)
T COG3391 77 AGVAVNPAGNKVYVTTGDSNTVSVIDTATNTVLGSIPVGL-GPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTAT 155 (381)
T ss_pred cceeeCCCCCeEEEecCCCCeEEEEcCcccceeeEeeecc-CCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEE
Confidence 466788888865544 445889999976655555443322 4567899999987766655 68899999888887776
Q ss_pred EecCCccEEEEEEcCCCCEEEEee-CCCCEEEEECCCCeEEE-----eecCCCCCeEEEEECCCCCEEEEecCC---CeE
Q psy4393 107 LKGHSNYVFCCNFNPQSNLIVSGS-FDESVRIWDVRTGKCLK-----TLPAHSDPVSAVHFNRDGSLIVSSSYD---GLC 177 (247)
Q Consensus 107 ~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~v~d~~~~~~~~-----~~~~~~~~i~~~~~~~~~~~l~~~~~d---g~i 177 (247)
......+ ..+.++|+++.++... .++.+.++|........ ....... -..+.++|++..+++.... +.+
T Consensus 156 ~~vG~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~~~~~~~~~~~~~-P~~i~v~~~g~~~yV~~~~~~~~~v 233 (381)
T COG3391 156 IPVGNTP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVRGSVGSLVGVGTG-PAGIAVDPDGNRVYVANDGSGSNNV 233 (381)
T ss_pred EecCCCc-ceEEECCCCCeEEEEecCCCeEEEEeCCCcceeccccccccccCCC-CceEEECCCCCEEEEEeccCCCceE
Confidence 5544344 6789999999666654 67889999977654442 1222222 2457899999976655443 589
Q ss_pred EEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEc-CCeEEEEECCCcceEEEEc
Q psy4393 178 RIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATL-DNTLKLWDSKVVTPAIICS 235 (247)
Q Consensus 178 ~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-dg~i~vwd~~~~~~~~~~~ 235 (247)
...|..++.............-..+..+|+|..+..... .+.+.+-|..+........
T Consensus 234 ~~id~~~~~v~~~~~~~~~~~~~~v~~~p~g~~~yv~~~~~~~V~vid~~~~~v~~~~~ 292 (381)
T COG3391 234 LKIDTATGNVTATDLPVGSGAPRGVAVDPAGKAAYVANSQGGTVSVIDGATDRVVKTGP 292 (381)
T ss_pred EEEeCCCceEEEeccccccCCCCceeECCCCCEEEEEecCCCeEEEEeCCCCceeeeec
Confidence 999998877665422211112345789999999988854 4899999988765544433
No 316
>KOG2066|consensus
Probab=98.56 E-value=2e-05 Score=67.14 Aligned_cols=183 Identities=17% Similarity=0.255 Sum_probs=123.5
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceEEEE
Q psy4393 27 TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKT 106 (247)
Q Consensus 27 ~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~ 106 (247)
...++|++++ +++++-|+-+|.|++++.... . .....|... ..+|.++++|+.||.+.+-.+-+.+....
T Consensus 39 ~D~is~~av~--~~~~~~GtH~g~v~~~~~~~~-~-~~~~~~s~~------~~~Gey~asCS~DGkv~I~sl~~~~~~~~ 108 (846)
T KOG2066|consen 39 NDAISCCAVH--DKFFALGTHRGAVYLTTCQGN-P-KTNFDHSSS------ILEGEYVASCSDDGKVVIGSLFTDDEITQ 108 (846)
T ss_pred hhHHHHHHhh--cceeeeccccceEEEEecCCc-c-ccccccccc------ccCCceEEEecCCCcEEEeeccCCcccee
Confidence 3456666665 678999999999999987433 2 222223322 56799999999999999988877766555
Q ss_pred EecCCccEEEEEEcCC-----CCEEEEeeCCCCEEEEECCC-C-eEEEeecCCCCCeEEEEECCCCCEEEEecCCCeEEE
Q psy4393 107 LKGHSNYVFCCNFNPQ-----SNLIVSGSFDESVRIWDVRT-G-KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 179 (247)
Q Consensus 107 ~~~~~~~v~~~~~~~~-----~~~l~~~~~d~~i~v~d~~~-~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v 179 (247)
+. ..-++..++++|+ ...+++|+..| +.++.-+- + ..........++|.++.|. |.++|-+..+| +++
T Consensus 109 ~d-f~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~l~~~eG~I~~i~W~--g~lIAWand~G-v~v 183 (846)
T KOG2066|consen 109 YD-FKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSVVLSEGEGPIHSIKWR--GNLIAWANDDG-VKV 183 (846)
T ss_pred Ee-cCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccceeeecCccceEEEEec--CcEEEEecCCC-cEE
Confidence 44 3345788899997 56789998888 77765331 1 1111355667899999994 67888887666 799
Q ss_pred EeCCCceeeeeeccCCCC-----CeEEEEECCCCCEEEEEEcCCeEEEEECC
Q psy4393 180 WDTASGQCLKTLIDDDNP-----PVSFVKFSPNGKYILAATLDNTLKLWDSK 226 (247)
Q Consensus 180 ~d~~~~~~~~~~~~~~~~-----~v~~~~~s~~~~~l~~~~~dg~i~vwd~~ 226 (247)
||..+.+.+..+...... --..+.|.++.++++.-+ .+|+|...+
T Consensus 184 yd~~~~~~l~~i~~p~~~~R~e~fpphl~W~~~~~LVIGW~--d~v~i~~I~ 233 (846)
T KOG2066|consen 184 YDTPTRQRLTNIPPPSQSVRPELFPPHLHWQDEDRLVIGWG--DSVKICSIK 233 (846)
T ss_pred EeccccceeeccCCCCCCCCcccCCCceEecCCCeEEEecC--CeEEEEEEe
Confidence 999887765544332211 012467887765554433 467777665
No 317
>KOG1275|consensus
Probab=98.56 E-value=1.2e-06 Score=75.16 Aligned_cols=142 Identities=16% Similarity=0.224 Sum_probs=108.3
Q ss_pred CCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcC---------CCeEEEEECCCceEEEEE
Q psy4393 37 PNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSD---------DKTLKIWELSSGKCLKTL 107 (247)
Q Consensus 37 ~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---------d~~i~v~d~~~~~~~~~~ 107 (247)
.+++.+.+|...|+|.+-|..+.+...++..|.+.+.++. -.|+.|++++. |..|+|||++.-+.+..+
T Consensus 185 ~Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~siSDfD--v~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI 262 (1118)
T KOG1275|consen 185 YNNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGSISDFD--VQGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPI 262 (1118)
T ss_pred ecCcEEEeecccceEEeecCCcCceeeeeeccccceeeee--ccCCeEEEeecccccccccccchhhhhhhhhhhccCCc
Confidence 4578899999999999999999999999999999988654 46889998875 456889999876655555
Q ss_pred ecCCccEEEEEEcCC-CCEEEEeeCCCCEEEEE---CCCCe-EEEeecCCCCCeEEEEECCCCCEEEEecCCCeEEEEe
Q psy4393 108 KGHSNYVFCCNFNPQ-SNLIVSGSFDESVRIWD---VRTGK-CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181 (247)
Q Consensus 108 ~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~v~d---~~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d 181 (247)
.-+.++ .-+.|.|. ...++..+..|...+.| +.+.. .+..+......+..+++++++..++.|..+|.|.+|.
T Consensus 263 ~~~~~P-~flrf~Psl~t~~~V~S~sGq~q~vd~~~lsNP~~~~~~v~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa 340 (1118)
T KOG1275|consen 263 QFPYGP-QFLRFHPSLTTRLAVTSQSGQFQFVDTATLSNPPAGVKMVNPNGSGISAFDISSNGDALAFGDHEGHVNLWA 340 (1118)
T ss_pred ccccCc-hhhhhcccccceEEEEecccceeeccccccCCCccceeEEccCCCcceeEEecCCCceEEEecccCcEeeec
Confidence 444333 23566774 35677788899999998 33321 2233334445589999999999999999999999996
No 318
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=98.53 E-value=2.9e-06 Score=64.63 Aligned_cols=196 Identities=22% Similarity=0.436 Sum_probs=126.0
Q ss_pred CCeEEEEECCCCC--EEEEEeCCCeEEEEecCCCeEE-----------------------------------------EE
Q psy4393 28 KAVSSVKFSPNGE--WLASSSADKLIKIWGAYDGKFE-----------------------------------------KT 64 (247)
Q Consensus 28 ~~v~~~~~s~~~~--~l~~~~~dg~v~iw~~~~~~~~-----------------------------------------~~ 64 (247)
..|..+.|-.++. .++..+.|.++++|-+...... +.
T Consensus 86 EKin~I~w~~~t~r~hFLlstNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~r 165 (460)
T COG5170 86 EKINAIEWFDDTGRNHFLLSTNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCR 165 (460)
T ss_pred HHhhheeeecCCCcceEEEecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccce
Confidence 4577888866543 4566678999999976432100 00
Q ss_pred -E-ecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCce---EEEEEecC-----CccEEEEEEcCC-CCEEEEeeCCC
Q psy4393 65 -I-SGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGK---CLKTLKGH-----SNYVFCCNFNPQ-SNLIVSGSFDE 133 (247)
Q Consensus 65 -~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~---~~~~~~~~-----~~~v~~~~~~~~-~~~l~~~~~d~ 133 (247)
. ..|...+.++.+..|.+.++++ .|-.|.+|+++-.. .+-.++.+ ...|.+..|+|. .+.+...+..|
T Consensus 166 vyaNaH~yhiNSiS~NsD~et~lSa-DdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG 244 (460)
T COG5170 166 VYANAHPYHINSISFNSDKETLLSA-DDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKG 244 (460)
T ss_pred eccccceeEeeeeeecCchheeeec-cceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCC
Confidence 0 1244457788898888877766 57789999986432 11222332 234677788885 45677778899
Q ss_pred CEEEEECCCCeE------EEee----------cCCCCCeEEEEECCCCCEEEEecCCCeEEEEeCCCce-eeeeeccC--
Q psy4393 134 SVRIWDVRTGKC------LKTL----------PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ-CLKTLIDD-- 194 (247)
Q Consensus 134 ~i~v~d~~~~~~------~~~~----------~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~-~~~~~~~~-- 194 (247)
.|++-|+|.... +... ..-...|..+.|+++|+++++-. --++++||....+ ++++...+
T Consensus 245 ~Ikl~DlRq~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRd-yltvkiwDvnm~k~pikTi~~h~~ 323 (460)
T COG5170 245 EIKLNDLRQSALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRD-YLTVKIWDVNMAKNPIKTIPMHCD 323 (460)
T ss_pred cEEehhhhhhhhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEec-cceEEEEecccccCCceeechHHH
Confidence 999999984321 1111 11123578899999999888654 3579999987643 33333111
Q ss_pred ---------CCCCe---EEEEECCCCCEEEEEEcCCeEEEEEC
Q psy4393 195 ---------DNPPV---SFVKFSPNGKYILAATLDNTLKLWDS 225 (247)
Q Consensus 195 ---------~~~~v---~~~~~s~~~~~l~~~~~dg~i~vwd~ 225 (247)
+...| -.+.|+.|.+.+++|+..+..-+|-.
T Consensus 324 l~~~l~d~YEnDaifdkFeisfSgd~~~v~sgsy~NNfgiyp~ 366 (460)
T COG5170 324 LMDELNDVYENDAIFDKFEISFSGDDKHVLSGSYSNNFGIYPT 366 (460)
T ss_pred HHHHHHhhhhccceeeeEEEEecCCcccccccccccceeeecc
Confidence 11122 23789999999999999988888863
No 319
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=98.52 E-value=0.00026 Score=58.30 Aligned_cols=178 Identities=20% Similarity=0.229 Sum_probs=97.0
Q ss_pred eEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceEEEEE-------ecCCccEEEEEEcCC
Q psy4393 50 LIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTL-------KGHSNYVFCCNFNPQ 122 (247)
Q Consensus 50 ~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~-------~~~~~~v~~~~~~~~ 122 (247)
.|++|+.. |+....+.-....+..+.|+.+.+ |++...||.+++||+.. +....+ .-....+....+..+
T Consensus 62 ~I~iys~s-G~ll~~i~w~~~~iv~~~wt~~e~-LvvV~~dG~v~vy~~~G-~~~fsl~~~i~~~~v~e~~i~~~~~~~~ 138 (410)
T PF04841_consen 62 SIQIYSSS-GKLLSSIPWDSGRIVGMGWTDDEE-LVVVQSDGTVRVYDLFG-EFQFSLGEEIEEEKVLECRIFAIWFYKN 138 (410)
T ss_pred EEEEECCC-CCEeEEEEECCCCEEEEEECCCCe-EEEEEcCCEEEEEeCCC-ceeechhhhccccCcccccccccccCCC
Confidence 58888864 555555554457899999998654 55666899999999863 321111 111111222223334
Q ss_pred CCEEEEeeCCCCEEEEECCCCe-EEEeecCCCC---------CeEE-EEECCCCCEEEEecCCCeEEEEeCCCceeeeee
Q psy4393 123 SNLIVSGSFDESVRIWDVRTGK-CLKTLPAHSD---------PVSA-VHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 191 (247)
Q Consensus 123 ~~~l~~~~~d~~i~v~d~~~~~-~~~~~~~~~~---------~i~~-~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~ 191 (247)
|-.+. ..++.+.+..-.... ..+.+..-.. .... ..++.+....+....++.+.+.+....+.
T Consensus 139 GivvL--t~~~~~~~v~n~~~~~~~~~~~~~p~~~~~~~~~~~~~~i~~l~~~~~~~i~~~~g~~i~~i~~~~~~~---- 212 (410)
T PF04841_consen 139 GIVVL--TGNNRFYVVNNIDEPVKLRRLPEIPGLWTKFHWWPSWTVIPLLSSDRVVEILLANGETIYIIDENSFKQ---- 212 (410)
T ss_pred CEEEE--CCCCeEEEEeCccccchhhccccCCCcccccccccccccceEeecCcceEEEEecCCEEEEEEcccccc----
Confidence 43333 334445444322211 1111110000 0000 12333444444444445555333222111
Q ss_pred ccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcceEEEEccC
Q psy4393 192 IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTP 237 (247)
Q Consensus 192 ~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~ 237 (247)
.....++..+++||+|++||.-..+|.+.|...+-.+.+..+...
T Consensus 213 -i~~~~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~~~~e~~~~ 257 (410)
T PF04841_consen 213 -IDSDGPIIKIAVSPNGKFIALFTDSGNLWVVSSDFSEKLCEFDTD 257 (410)
T ss_pred -ccCCCCeEEEEECCCCCEEEEEECCCCEEEEECcccceeEEeecC
Confidence 112357899999999999999999999999998877777776665
No 320
>KOG1008|consensus
Probab=98.52 E-value=3.9e-08 Score=81.05 Aligned_cols=199 Identities=21% Similarity=0.294 Sum_probs=125.8
Q ss_pred CCCeEEEEECCCC--CEEEEEeCCCeEEEEecCCCeEE--EEEecccCCeEEEEECC-CCCEEEEEcC----CCeEEEEE
Q psy4393 27 TKAVSSVKFSPNG--EWLASSSADKLIKIWGAYDGKFE--KTISGHKLGISDVAWSS-DSRLLVSGSD----DKTLKIWE 97 (247)
Q Consensus 27 ~~~v~~~~~s~~~--~~l~~~~~dg~v~iw~~~~~~~~--~~~~~~~~~v~~~~~~~-~~~~l~~~~~----d~~i~v~d 97 (247)
...+.|+++..+. ..++.|..+|.|-+-...+.... ....++...+++++|.+ |.+.|++|-. |..+.+||
T Consensus 56 tqy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwd 135 (783)
T KOG1008|consen 56 TQYVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWD 135 (783)
T ss_pred CCCceeehhhcCCchhhhhhccccCceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCcccee
Confidence 4557777776543 46788899999988776543322 23445667799999998 5566666532 45789999
Q ss_pred CCCce--E--EEEEec-CCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECC-CCCEEEEe
Q psy4393 98 LSSGK--C--LKTLKG-HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNR-DGSLIVSS 171 (247)
Q Consensus 98 ~~~~~--~--~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~ 171 (247)
+.++- + ...+.+ .......++|..+.+++.+|...+.++++|+|.... .........+..+.++| .+.++++-
T Consensus 136 i~s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~~-~~~svnTk~vqG~tVdp~~~nY~cs~ 214 (783)
T KOG1008|consen 136 INSLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLD-SVSSVNTKYVQGITVDPFSPNYFCSN 214 (783)
T ss_pred cccccCCCccccccccccccCccccccccCcchhhcccccchhhhhhhhhhhh-hhhhhhhhhcccceecCCCCCceecc
Confidence 98751 1 111222 223345788888889999999999999999984321 11111122345566777 66677655
Q ss_pred cCCCeEEEEe-CCCcee-eeeeccCC---CCCeEEEEECCCCC-EEEEEEc-CCeEEEEECCC
Q psy4393 172 SYDGLCRIWD-TASGQC-LKTLIDDD---NPPVSFVKFSPNGK-YILAATL-DNTLKLWDSKV 227 (247)
Q Consensus 172 ~~dg~i~v~d-~~~~~~-~~~~~~~~---~~~v~~~~~s~~~~-~l~~~~~-dg~i~vwd~~~ 227 (247)
. ||.+.+|| .++-+. +....... ...+..++|.|-.. .+++.+. .++|+++|+..
T Consensus 215 ~-dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~~ 276 (783)
T KOG1008|consen 215 S-DGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDICV 276 (783)
T ss_pred c-cCceeeccchhhhccHHHHHhhCCCCcccceeeEEeccCCcchhhhhccCcceEEEecccc
Confidence 4 99999999 443221 22221111 12477899998643 4445554 57999999764
No 321
>KOG1645|consensus
Probab=98.52 E-value=7.7e-06 Score=64.27 Aligned_cols=212 Identities=14% Similarity=0.152 Sum_probs=119.1
Q ss_pred EecCCCCeEEEEECCCCC-EEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCC-CEEEEEcCCCeEEEEECCC
Q psy4393 23 LAGHTKAVSSVKFSPNGE-WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS-RLLVSGSDDKTLKIWELSS 100 (247)
Q Consensus 23 ~~~h~~~v~~~~~s~~~~-~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~v~d~~~ 100 (247)
+.+|...|..++|+|..+ ++..++.+..|+|.|+++.........+ ..+.+++|+-+. .+|.+|..+|.|.+||++.
T Consensus 189 lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~-~~~wSC~wDlde~h~IYaGl~nG~VlvyD~R~ 267 (463)
T KOG1645|consen 189 LPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY-NQIWSCCWDLDERHVIYAGLQNGMVLVYDMRQ 267 (463)
T ss_pred ccccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheecc-CCceeeeeccCCcceeEEeccCceEEEEEccC
Confidence 346788899999999887 5677889999999999988877777665 679999998765 4577888899999999976
Q ss_pred ce-EEEEEec--CCccEEEEEE------cCCCCEEEEeeCCCCEEEEECCCCe--EEEeec-CCCCCeEEEEECCCCCEE
Q psy4393 101 GK-CLKTLKG--HSNYVFCCNF------NPQSNLIVSGSFDESVRIWDVRTGK--CLKTLP-AHSDPVSAVHFNRDGSLI 168 (247)
Q Consensus 101 ~~-~~~~~~~--~~~~v~~~~~------~~~~~~l~~~~~d~~i~v~d~~~~~--~~~~~~-~~~~~i~~~~~~~~~~~l 168 (247)
.+ .+..+.+ ...+|..++. .+.+.+++.... .+..|+..... ...... ...+.+.++++++..+++
T Consensus 268 ~~~~~~e~~a~~t~~pv~~i~~~~~n~~f~~gglLv~~lt--~l~f~ei~~s~~~~p~vlele~pG~cismqy~~~snh~ 345 (463)
T KOG1645|consen 268 PEGPLMELVANVTINPVHKIAPVQPNKIFTSGGLLVFALT--VLQFYEIVFSAECLPCVLELEPPGICISMQYHGVSNHL 345 (463)
T ss_pred CCchHhhhhhhhccCcceeecccCccccccccceEEeeeh--hhhhhhhhccccCCCcccccCCCcceeeeeecCccceE
Confidence 43 1222221 1122333222 233444444333 23455543211 111121 224567777777765655
Q ss_pred EEecCCC-------eEEE-EeCCCceeeee----eccCCCCCe---EEEEECCCCCEEEE-EEcCCeEEEEECCCcceEE
Q psy4393 169 VSSSYDG-------LCRI-WDTASGQCLKT----LIDDDNPPV---SFVKFSPNGKYILA-ATLDNTLKLWDSKVVTPAI 232 (247)
Q Consensus 169 ~~~~~dg-------~i~v-~d~~~~~~~~~----~~~~~~~~v---~~~~~s~~~~~l~~-~~~dg~i~vwd~~~~~~~~ 232 (247)
+...... .+-. -|...|..+-. .......+. ..+.-.++..+++. +...+.+.+||....+.+-
T Consensus 346 l~tyRs~pn~p~~r~il~~~d~~dG~pVc~~r~~~~Gs~~~kl~t~~ai~~~~~nn~iv~~gd~tn~lil~D~~s~evvQ 425 (463)
T KOG1645|consen 346 LLTYRSNPNFPQSRFILGRIDFRDGFPVCGKRRTYFGSKQTKLSTTQAIRAVEDNNYIVVVGDSTNELILQDPHSFEVVQ 425 (463)
T ss_pred EEEecCCCCCccceeeeeeeccccCceeeeecccccCCcccccccccceeccccccEEEEecCCcceeEEeccchhheee
Confidence 5443221 1111 12222222111 101000011 11222455566654 4456799999998776554
Q ss_pred EEccC
Q psy4393 233 ICSTP 237 (247)
Q Consensus 233 ~~~~~ 237 (247)
.++..
T Consensus 426 ~l~~~ 430 (463)
T KOG1645|consen 426 TLALS 430 (463)
T ss_pred ecccC
Confidence 44443
No 322
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=98.51 E-value=3.1e-05 Score=63.70 Aligned_cols=165 Identities=19% Similarity=0.212 Sum_probs=102.3
Q ss_pred CeEEEEEecccCCeEEEEECCCCCEEEEE---cCC-CeEEEEECCCceEEEEEecCCccEEEEEEcCCCCEEEEee-CCC
Q psy4393 59 GKFEKTISGHKLGISDVAWSSDSRLLVSG---SDD-KTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS-FDE 133 (247)
Q Consensus 59 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~---~~d-~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~ 133 (247)
+.....+......+..-.|+|++..++.. ... ..+.++++.+++....+. ..+.-....|+|+|+.++... .||
T Consensus 182 g~~~~~l~~~~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~-~~g~~~~P~fspDG~~l~f~~~rdg 260 (425)
T COG0823 182 GYNQQKLTDSGSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILN-FNGNNGAPAFSPDGSKLAFSSSRDG 260 (425)
T ss_pred CcceeEecccCcceeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeec-cCCccCCccCCCCCCEEEEEECCCC
Confidence 44444555455567778899999876544 222 468899998876554443 222334568999998887654 455
Q ss_pred --CEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEec-CCC--eEEEEeCCCceeeeeeccCCCCCeEEEEECCCC
Q psy4393 134 --SVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSS-YDG--LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG 208 (247)
Q Consensus 134 --~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg--~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~ 208 (247)
.|+++|+..++. ..+....+.-..-.|+|||+.++-.+ ..| .|.++|...++.......... -..-.|+|||
T Consensus 261 ~~~iy~~dl~~~~~-~~Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~~riT~~~~~--~~~p~~SpdG 337 (425)
T COG0823 261 SPDIYLMDLDGKNL-PRLTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQVTRLTFSGGG--NSNPVWSPDG 337 (425)
T ss_pred CccEEEEcCCCCcc-eecccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCceeEeeccCCC--CcCccCCCCC
Confidence 477788887763 33433333334557999999877654 344 566667776654222222111 1256799999
Q ss_pred CEEEEEEcC-Ce--EEEEECCC
Q psy4393 209 KYILAATLD-NT--LKLWDSKV 227 (247)
Q Consensus 209 ~~l~~~~~d-g~--i~vwd~~~ 227 (247)
++++..+.. |. |.+.|...
T Consensus 338 ~~i~~~~~~~g~~~i~~~~~~~ 359 (425)
T COG0823 338 DKIVFESSSGGQWDIDKNDLAS 359 (425)
T ss_pred CEEEEEeccCCceeeEEeccCC
Confidence 999987753 44 55555543
No 323
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=98.50 E-value=5.7e-05 Score=61.23 Aligned_cols=198 Identities=15% Similarity=0.164 Sum_probs=124.3
Q ss_pred CCCeEEEEECCCCCEEEEEeCC---------------CeEEEEecCCCeEEEEEecccCC--eE-EEEECCCCCEEEEEc
Q psy4393 27 TKAVSSVKFSPNGEWLASSSAD---------------KLIKIWGAYDGKFEKTISGHKLG--IS-DVAWSSDSRLLVSGS 88 (247)
Q Consensus 27 ~~~v~~~~~s~~~~~l~~~~~d---------------g~v~iw~~~~~~~~~~~~~~~~~--v~-~~~~~~~~~~l~~~~ 88 (247)
...|.-+.|+|.+++|.+=... ..+.+||...+..+..+.+...+ .. -+.|+.+.++++-.
T Consensus 71 ~~~V~~~~fSP~~kYL~tw~~~pi~~pe~e~sp~~~~n~~~vwd~~sg~iv~sf~~~~q~~~~Wp~~k~s~~D~y~ARv- 149 (561)
T COG5354 71 HPDVKYLDFSPNEKYLVTWSREPIIEPEIEISPFTSKNNVFVWDIASGMIVFSFNGISQPYLGWPVLKFSIDDKYVARV- 149 (561)
T ss_pred cCCceecccCcccceeeeeccCCccChhhccCCccccCceeEEeccCceeEeeccccCCcccccceeeeeecchhhhhh-
Confidence 3568889999999999874432 24899999998888776654443 33 56788887766544
Q ss_pred CCCeEEEEECCCceE-EEEEecC-CccEEEEEEcCCCC--EEEE-----eeCCCCEEEEECCCCeEEEeecCCCCCeEEE
Q psy4393 89 DDKTLKIWELSSGKC-LKTLKGH-SNYVFCCNFNPQSN--LIVS-----GSFDESVRIWDVRTGKCLKTLPAHSDPVSAV 159 (247)
Q Consensus 89 ~d~~i~v~d~~~~~~-~~~~~~~-~~~v~~~~~~~~~~--~l~~-----~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~ 159 (247)
-...+.++++ +... ...++.. ...+....|+|.++ .|++ .+....+++|.+..++.+....-....--.+
T Consensus 150 v~~sl~i~e~-t~n~~~~p~~~lr~~gi~dFsisP~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lfk~~~~qL 228 (561)
T COG5354 150 VGSSLYIHEI-TDNIEEHPFKNLRPVGILDFSISPEGNHDELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLFKVSGVQL 228 (561)
T ss_pred ccCeEEEEec-CCccccCchhhccccceeeEEecCCCCCceEEEEccccCCCCcEEEEEEccCCCeeeeeeeEeecccEE
Confidence 2346888997 3321 1111111 23466777888643 2332 4567789999988666544322111122357
Q ss_pred EECCCCCEEEEec-----------CCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEE--cCCeEEEEECC
Q psy4393 160 HFNRDGSLIVSSS-----------YDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT--LDNTLKLWDSK 226 (247)
Q Consensus 160 ~~~~~~~~l~~~~-----------~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~dg~i~vwd~~ 226 (247)
.|++.|++|++-. ....+.++++......... .-..+|....|.|+++.+++.+ .+-.+.++|.+
T Consensus 229 kW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e~~i~V~~--~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr 306 (561)
T COG5354 229 KWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRITERSIPVEK--DLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLR 306 (561)
T ss_pred EEecCCceEEEEEEEeeecccceeccceEEEEeecccccceec--cccccceeeeecccCCceeEEecccccceeecccc
Confidence 8888888664321 1234667777643322221 3357899999999998887665 56788899887
Q ss_pred Cc
Q psy4393 227 VV 228 (247)
Q Consensus 227 ~~ 228 (247)
..
T Consensus 307 ~N 308 (561)
T COG5354 307 GN 308 (561)
T ss_pred cc
Confidence 75
No 324
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=98.50 E-value=8.4e-05 Score=61.07 Aligned_cols=189 Identities=12% Similarity=0.092 Sum_probs=108.9
Q ss_pred EEEEEeCCCeEEEEecCCCeEEEEEecccCCeEE-EEECC--CCCEEEEEcCCCeEEEEECCCceEEEEEecCCc-----
Q psy4393 41 WLASSSADKLIKIWGAYDGKFEKTISGHKLGISD-VAWSS--DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSN----- 112 (247)
Q Consensus 41 ~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~-~~~~~--~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~----- 112 (247)
.++.+..+|.+.-+|..+++.............. ..-+| .+..++.+..++.+..+|.++++..........
T Consensus 162 ~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~sP~v~~~~v~~~~~~g~v~a~d~~~G~~~W~~~~~~~~~~~~ 241 (394)
T PRK11138 162 LVLVHTSNGMLQALNESDGAVKWTVNLDVPSLTLRGESAPATAFGGAIVGGDNGRVSAVLMEQGQLIWQQRISQPTGATE 241 (394)
T ss_pred EEEEECCCCEEEEEEccCCCEeeeecCCCCcccccCCCCCEEECCEEEEEcCCCEEEEEEccCChhhheeccccCCCccc
Confidence 4445566777777777777766655432110000 00112 133566677788888889888875543321100
Q ss_pred --cEEEEEEcC--CCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCCCeEEEEeCCCceee
Q psy4393 113 --YVFCCNFNP--QSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCL 188 (247)
Q Consensus 113 --~v~~~~~~~--~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~ 188 (247)
....+..+| .+..++.++.+|.+..+|..+++.+....... ...+.. .+..++.++.+|.+..+|..+++.+
T Consensus 242 ~~~~~~~~~sP~v~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~--~~~~~~--~~~~vy~~~~~g~l~ald~~tG~~~ 317 (394)
T PRK11138 242 IDRLVDVDTTPVVVGGVVYALAYNGNLVALDLRSGQIVWKREYGS--VNDFAV--DGGRIYLVDQNDRVYALDTRGGVEL 317 (394)
T ss_pred hhcccccCCCcEEECCEEEEEEcCCeEEEEECCCCCEEEeecCCC--ccCcEE--ECCEEEEEcCCCeEEEEECCCCcEE
Confidence 000111122 24566677788999999999998766543211 111222 4566777888999999999988653
Q ss_pred eeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcceEEEEc
Q psy4393 189 KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICS 235 (247)
Q Consensus 189 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 235 (247)
=............... .+..|+.++.||.|.+.|.++++.+-...
T Consensus 318 W~~~~~~~~~~~sp~v--~~g~l~v~~~~G~l~~ld~~tG~~~~~~~ 362 (394)
T PRK11138 318 WSQSDLLHRLLTAPVL--YNGYLVVGDSEGYLHWINREDGRFVAQQK 362 (394)
T ss_pred EcccccCCCcccCCEE--ECCEEEEEeCCCEEEEEECCCCCEEEEEE
Confidence 2211111111111112 25678889999999999998887655443
No 325
>KOG1645|consensus
Probab=98.48 E-value=2.2e-06 Score=67.20 Aligned_cols=94 Identities=21% Similarity=0.301 Sum_probs=72.3
Q ss_pred EEEEecCCCeEEEEEecccCCeEEEEECCCCC-EEEEEcCCCeEEEEECCCceEEEEEecCCccEEEEEEcCCC-CEEEE
Q psy4393 51 IKIWGAYDGKFEKTISGHKLGISDVAWSSDSR-LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVS 128 (247)
Q Consensus 51 v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~ 128 (247)
+++.+..+-+....+..+...|.+++|+|..+ ++..++.+..|++.|+++...+.....+ ..+++++|+-+. +.++.
T Consensus 175 v~~l~~~~fkssq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~-~~~wSC~wDlde~h~IYa 253 (463)
T KOG1645|consen 175 VQKLESHDFKSSQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY-NQIWSCCWDLDERHVIYA 253 (463)
T ss_pred eEEeccCCcchhhcccccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheecc-CCceeeeeccCCcceeEE
Confidence 44444444333344455666799999999766 6788899999999999998888777766 678999998754 67788
Q ss_pred eeCCCCEEEEECCCCeE
Q psy4393 129 GSFDESVRIWDVRTGKC 145 (247)
Q Consensus 129 ~~~d~~i~v~d~~~~~~ 145 (247)
|..+|.|.+||++..+.
T Consensus 254 Gl~nG~VlvyD~R~~~~ 270 (463)
T KOG1645|consen 254 GLQNGMVLVYDMRQPEG 270 (463)
T ss_pred eccCceEEEEEccCCCc
Confidence 88999999999997653
No 326
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=98.46 E-value=3.1e-06 Score=69.61 Aligned_cols=75 Identities=19% Similarity=0.296 Sum_probs=62.9
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCc
Q psy4393 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSG 101 (247)
Q Consensus 25 ~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~ 101 (247)
.....|.+++++|+.++|+.|+.||.|.+||...+... ........+.++|+|+|..+++|+..|.+.+||+.-.
T Consensus 257 pL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~--~~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~ALs 331 (545)
T PF11768_consen 257 PLPSQVICCARSPSEDKLVLGCEDGSIILYDTTRGVTL--LAKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMALS 331 (545)
T ss_pred ecCCcceEEecCcccceEEEEecCCeEEEEEcCCCeee--eeeecccceEEEEcCCCcEEEEEcCCceEEEEEeecC
Confidence 46778999999999999999999999999998655322 2234556788999999999999999999999998643
No 327
>KOG4649|consensus
Probab=98.45 E-value=0.00027 Score=52.99 Aligned_cols=142 Identities=12% Similarity=0.089 Sum_probs=94.1
Q ss_pred CCEEEEEeCCCeEEEEecCCCeEEEEEe-cccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceEEEEEecCCccEEEE
Q psy4393 39 GEWLASSSADKLIKIWGAYDGKFEKTIS-GHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCC 117 (247)
Q Consensus 39 ~~~l~~~~~dg~v~iw~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~ 117 (247)
..+++.|+..+.+.--|..+++...... +.......+. -|++++.|...|.+++.+.++|.....+......-...
T Consensus 23 kT~v~igSHs~~~~avd~~sG~~~We~ilg~RiE~sa~v---vgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~vk~~a 99 (354)
T KOG4649|consen 23 KTLVVIGSHSGIVIAVDPQSGNLIWEAILGVRIECSAIV---VGDFVVLGCYSGGLYFLCVKTGSQIWNFVILETVKVRA 99 (354)
T ss_pred ceEEEEecCCceEEEecCCCCcEEeehhhCceeeeeeEE---ECCEEEEEEccCcEEEEEecchhheeeeeehhhhccce
Confidence 3466777777888777887777655432 1121222222 36789999999999999999997665555333222234
Q ss_pred EEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCCCeEEEEeCC
Q psy4393 118 NFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA 183 (247)
Q Consensus 118 ~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~ 183 (247)
...+++.++..|+.|+..+..|.++..++...+...+...+-++.|-...|+++...|.+..-...
T Consensus 100 ~~d~~~glIycgshd~~~yalD~~~~~cVykskcgG~~f~sP~i~~g~~sly~a~t~G~vlavt~~ 165 (354)
T KOG4649|consen 100 QCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSKCGGGTFVSPVIAPGDGSLYAAITAGAVLAVTKN 165 (354)
T ss_pred EEcCCCceEEEecCCCcEEEecccccceEEecccCCceeccceecCCCceEEEEeccceEEEEccC
Confidence 567889999999999999999999988888776554444444566633344445555655444333
No 328
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=98.43 E-value=0.00034 Score=53.22 Aligned_cols=199 Identities=17% Similarity=0.256 Sum_probs=111.5
Q ss_pred EEecCCCCeEEEEECCCCC-EEEEEeCCCeEEEEecCCCeEEEEEeccc-CCeEEEEECCCCCEEEEEcCCCeEEEEECC
Q psy4393 22 TLAGHTKAVSSVKFSPNGE-WLASSSADKLIKIWGAYDGKFEKTISGHK-LGISDVAWSSDSRLLVSGSDDKTLKIWELS 99 (247)
Q Consensus 22 ~~~~h~~~v~~~~~s~~~~-~l~~~~~dg~v~iw~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~ 99 (247)
.+.+-...++.++|.|+.+ ++++....+.|..++. +++....+.-.. .-...+++..++.++++.-.++.+.++++.
T Consensus 16 ~l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~-~G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~~ 94 (248)
T PF06977_consen 16 PLPGILDELSGLTYNPDTGTLFAVQDEPGEIYELSL-DGKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYIFTID 94 (248)
T ss_dssp E-TT--S-EEEEEEETTTTEEEEEETTTTEEEEEET-T--EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEEEEE-
T ss_pred ECCCccCCccccEEcCCCCeEEEEECCCCEEEEEcC-CCCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEEEEEe
Confidence 4556667799999999766 5556677788888886 566666654332 347788888888777777678999888873
Q ss_pred Cce------EEEEEe-----cCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCC---CeEEEe--------ecCCCCCeE
Q psy4393 100 SGK------CLKTLK-----GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT---GKCLKT--------LPAHSDPVS 157 (247)
Q Consensus 100 ~~~------~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~---~~~~~~--------~~~~~~~i~ 157 (247)
... ....+. .+...+..++|++.++.++.+-+.....+|.++. ...+.. .......+.
T Consensus 95 ~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~S 174 (248)
T PF06977_consen 95 DDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDLDDDKLFVRDLS 174 (248)
T ss_dssp ---TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE-HHHH-HT--SS---
T ss_pred ccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeeccccccccccceecccc
Confidence 211 112221 1233478899999888888877776677777654 111111 111223467
Q ss_pred EEEECCCC-CEEEEecCCCeEEEEeCCCceeeeeeccCC--------CCCeEEEEECCCCCEEEEEEcCCeEEEE
Q psy4393 158 AVHFNRDG-SLIVSSSYDGLCRIWDTASGQCLKTLIDDD--------NPPVSFVKFSPNGKYILAATLDNTLKLW 223 (247)
Q Consensus 158 ~~~~~~~~-~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~--------~~~v~~~~~s~~~~~l~~~~~dg~i~vw 223 (247)
++.++|.. .+++.......+..+| .+|+.+..+.... ..+-..++|+++|. |+..++-+...+|
T Consensus 175 ~l~~~p~t~~lliLS~es~~l~~~d-~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~-LYIvsEpNlfy~f 247 (248)
T PF06977_consen 175 GLSYDPRTGHLLILSDESRLLLELD-RQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGN-LYIVSEPNLFYRF 247 (248)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEE--TT--EEEEEE-STTGGG-SS---SEEEEEE-TT---EEEEETTTEEEEE
T ss_pred ceEEcCCCCeEEEEECCCCeEEEEC-CCCCEEEEEEeCCcccCcccccCCccEEEECCCCC-EEEEcCCceEEEe
Confidence 88999864 5666677778888888 5566554432221 23457899999985 4444455555544
No 329
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=98.42 E-value=8.2e-05 Score=61.13 Aligned_cols=191 Identities=12% Similarity=0.022 Sum_probs=109.0
Q ss_pred CCCEEEEEeCCCeEEEEecCCCeEEEEEecccC-CeE------EEEECC--CCCEEEEEcCCCeEEEEECCCceEEEEEe
Q psy4393 38 NGEWLASSSADKLIKIWGAYDGKFEKTISGHKL-GIS------DVAWSS--DSRLLVSGSDDKTLKIWELSSGKCLKTLK 108 (247)
Q Consensus 38 ~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~-~v~------~~~~~~--~~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 108 (247)
.+..+++++.+|.+.-+|..+++.......... ... .+.-.| ++..++.++.++.+.-+|.++|+.+...+
T Consensus 68 ~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~v~~~~v~v~~~~g~l~ald~~tG~~~W~~~ 147 (394)
T PRK11138 68 AYNKVYAADRAGLVKALDADTGKEIWSVDLSEKDGWFSKNKSALLSGGVTVAGGKVYIGSEKGQVYALNAEDGEVAWQTK 147 (394)
T ss_pred ECCEEEEECCCCeEEEEECCCCcEeeEEcCCCcccccccccccccccccEEECCEEEEEcCCCEEEEEECCCCCCccccc
Confidence 356777778889999999988887776543220 000 000111 35667788889999999999998766554
Q ss_pred cCCccEEE-EEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEE-EEECC--CCCEEEEecCCCeEEEEeCCC
Q psy4393 109 GHSNYVFC-CNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSA-VHFNR--DGSLIVSSSYDGLCRIWDTAS 184 (247)
Q Consensus 109 ~~~~~v~~-~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~-~~~~~--~~~~l~~~~~dg~i~v~d~~~ 184 (247)
.... +.+ ... .+..++.+..++.+..+|..+|+.+............ ..-+| .+..++.++.+|.+..+|..+
T Consensus 148 ~~~~-~~ssP~v--~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~sP~v~~~~v~~~~~~g~v~a~d~~~ 224 (394)
T PRK11138 148 VAGE-ALSRPVV--SDGLVLVHTSNGMLQALNESDGAVKWTVNLDVPSLTLRGESAPATAFGGAIVGGDNGRVSAVLMEQ 224 (394)
T ss_pred CCCc-eecCCEE--ECCEEEEECCCCEEEEEEccCCCEeeeecCCCCcccccCCCCCEEECCEEEEEcCCCEEEEEEccC
Confidence 3322 211 111 2345667778899999999999987776532111000 00011 123466677889898889888
Q ss_pred ceeeeeeccCCC---C---CeEEEEECC--CCCEEEEEEcCCeEEEEECCCcceE
Q psy4393 185 GQCLKTLIDDDN---P---PVSFVKFSP--NGKYILAATLDNTLKLWDSKVVTPA 231 (247)
Q Consensus 185 ~~~~~~~~~~~~---~---~v~~~~~s~--~~~~l~~~~~dg~i~vwd~~~~~~~ 231 (247)
++..-....... . ....+.-+| .+..++.++.+|.+.-+|..+++.+
T Consensus 225 G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~ald~~tG~~~ 279 (394)
T PRK11138 225 GQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNLVALDLRSGQIV 279 (394)
T ss_pred ChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCeEEEEECCCCCEE
Confidence 764322110000 0 000001111 2345666666777777777665543
No 330
>KOG2114|consensus
Probab=98.36 E-value=3.7e-05 Score=66.04 Aligned_cols=156 Identities=21% Similarity=0.330 Sum_probs=106.1
Q ss_pred EECCCCCEEEEEcCCCeEEEEECCCceEEEEEecCCcc-EEEEEEcCCCCEEEEeeCCC-----CEEEEECCC------C
Q psy4393 76 AWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNY-VFCCNFNPQSNLIVSGSFDE-----SVRIWDVRT------G 143 (247)
Q Consensus 76 ~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~~d~-----~i~v~d~~~------~ 143 (247)
.|++.+..++.|+.+|.|.+++-. -+..+.++++... +..+-...+.+++++.+.|+ .+++||+.. .
T Consensus 30 c~~s~~~~vvigt~~G~V~~Ln~s-~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n~sP 108 (933)
T KOG2114|consen 30 CCSSSTGSVVIGTADGRVVILNSS-FQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKNNSP 108 (933)
T ss_pred EEcCCCceEEEeeccccEEEeccc-ceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCCCCc
Confidence 478889999999999999887742 3344666666655 44343344446777766655 489999853 2
Q ss_pred eEE---Eee----cCCCCCeEEEEECCCCCEEEEecCCCeEEEEeCC---CceeeeeeccCCCCCeEEEEECCCCCEEEE
Q psy4393 144 KCL---KTL----PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA---SGQCLKTLIDDDNPPVSFVKFSPNGKYILA 213 (247)
Q Consensus 144 ~~~---~~~----~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~---~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 213 (247)
+++ ..+ +..+.|+.+++.+.+-..+++|-.+|.|..+.-+ ..............+|+.+++..+++.++.
T Consensus 109 ~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d~~s~lF 188 (933)
T KOG2114|consen 109 QCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALRSDGKSVLF 188 (933)
T ss_pred ceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeEEecCCceeEE
Confidence 233 111 1235678899999998999999999999888432 222233444556789999999999988555
Q ss_pred EEcCCeEEEEECCCcceEE
Q psy4393 214 ATLDNTLKLWDSKVVTPAI 232 (247)
Q Consensus 214 ~~~dg~i~vwd~~~~~~~~ 232 (247)
..+..+|.+|......|..
T Consensus 189 v~Tt~~V~~y~l~gr~p~~ 207 (933)
T KOG2114|consen 189 VATTEQVMLYSLSGRTPSL 207 (933)
T ss_pred EEecceeEEEEecCCCcce
Confidence 5556788888877555443
No 331
>PRK02888 nitrous-oxide reductase; Validated
Probab=98.34 E-value=0.00019 Score=60.74 Aligned_cols=185 Identities=12% Similarity=0.098 Sum_probs=113.5
Q ss_pred EEECCCCCEEEE-EeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCC----CeEEEEECCCceEEEEE
Q psy4393 33 VKFSPNGEWLAS-SSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDD----KTLKIWELSSGKCLKTL 107 (247)
Q Consensus 33 ~~~s~~~~~l~~-~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~v~d~~~~~~~~~~ 107 (247)
+-++|||+.+.. .-..+.+.+.|..+.+....+.-.. ....++++|+|+++++.+.+ ..+...+..+......+
T Consensus 198 ~PlpnDGk~l~~~~ey~~~vSvID~etmeV~~qV~Vdg-npd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d~~vvf 276 (635)
T PRK02888 198 IPLPNDGKDLDDPKKYRSLFTAVDAETMEVAWQVMVDG-NLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERDWVVVF 276 (635)
T ss_pred cccCCCCCEeecccceeEEEEEEECccceEEEEEEeCC-CcccceECCCCCEEEEeccCcccCcceeeeccccCceEEEE
Confidence 446677775532 3345667777877766655554322 44667899999998877532 22333332222211111
Q ss_pred ecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCC-----CeEEEeecCCCCCeEEEEECCCCCEEEEec-CCCeEEEEe
Q psy4393 108 KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT-----GKCLKTLPAHSDPVSAVHFNRDGSLIVSSS-YDGLCRIWD 181 (247)
Q Consensus 108 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~-----~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~v~d 181 (247)
... .+ -.+.++|+.... .++.|.++|.++ ...+..+... .....+.++|||+++++++ .+..+.|+|
T Consensus 277 ni~--~i--ea~vkdGK~~~V--~gn~V~VID~~t~~~~~~~v~~yIPVG-KsPHGV~vSPDGkylyVanklS~tVSVID 349 (635)
T PRK02888 277 NIA--RI--EEAVKAGKFKTI--GGSKVPVVDGRKAANAGSALTRYVPVP-KNPHGVNTSPDGKYFIANGKLSPTVTVID 349 (635)
T ss_pred chH--HH--HHhhhCCCEEEE--CCCEEEEEECCccccCCcceEEEEECC-CCccceEECCCCCEEEEeCCCCCcEEEEE
Confidence 110 00 023446666555 356799999998 3455555543 3457789999999887665 478999999
Q ss_pred CCCcee------------eeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCC
Q psy4393 182 TASGQC------------LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKV 227 (247)
Q Consensus 182 ~~~~~~------------~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~ 227 (247)
+.+.+. ...... ...| ...+|+++|.-..+-..|..|..||...
T Consensus 350 v~k~k~~~~~~~~~~~~vvaevev-GlGP-LHTaFDg~G~aytslf~dsqv~kwn~~~ 405 (635)
T PRK02888 350 VRKLDDLFDGKIKPRDAVVAEPEL-GLGP-LHTAFDGRGNAYTTLFLDSQIVKWNIEA 405 (635)
T ss_pred ChhhhhhhhccCCccceEEEeecc-CCCc-ceEEECCCCCEEEeEeecceeEEEehHH
Confidence 987542 111111 2223 3478999998777778899999999765
No 332
>KOG3617|consensus
Probab=98.33 E-value=8.9e-06 Score=69.78 Aligned_cols=186 Identities=13% Similarity=0.202 Sum_probs=116.2
Q ss_pred EEECCCCCEEEEEe----CCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceEEEEEe
Q psy4393 33 VKFSPNGEWLASSS----ADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLK 108 (247)
Q Consensus 33 ~~~s~~~~~l~~~~----~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 108 (247)
..|+|...+++.++ ..|.|.||- ++|+....+. .+..+++++|+|..-.++.+-.-|.+.+|...+.+.-....
T Consensus 21 ~SWHPsePlfAVA~fS~er~GSVtIfa-dtGEPqr~Vt-~P~hatSLCWHpe~~vLa~gwe~g~~~v~~~~~~e~htv~~ 98 (1416)
T KOG3617|consen 21 SSWHPSEPLFAVASFSPERGGSVTIFA-DTGEPQRDVT-YPVHATSLCWHPEEFVLAQGWEMGVSDVQKTNTTETHTVVE 98 (1416)
T ss_pred cccCCCCceeEEEEecCCCCceEEEEe-cCCCCCcccc-cceehhhhccChHHHHHhhccccceeEEEecCCceeeeecc
Confidence 46999999888765 468888883 4555443332 24457789999988788888888999999987766544556
Q ss_pred cCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEe--ecCCC--C--CeEEEEECCCCC------EEEEecCCCe
Q psy4393 109 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKT--LPAHS--D--PVSAVHFNRDGS------LIVSSSYDGL 176 (247)
Q Consensus 109 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~--~~~~~--~--~i~~~~~~~~~~------~l~~~~~dg~ 176 (247)
.|..++..+.|+|+|..+.++..-|.+.+|.+..-..+.. +-.|+ . ...|...++++. ..++.+.+..
T Consensus 99 th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d~~g~~q~~~~~~hel~~~ltl~cfRL~~~~Ee~~~laKaaVtgDe~a 178 (1416)
T KOG3617|consen 99 THPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYDVIGEIQTSNIMQHELNDQLTLWCFRLSYDREEKFKLAKAAVTGDESA 178 (1416)
T ss_pred CCCCCceeEEecCCCCeEEEcCCCceeEEEEeeeccccccchhhhhHhhceeeEEEEecCCChHHhhhhhhhhccCchhh
Confidence 7888999999999999999999999999997652211111 11111 1 123445556532 1233333332
Q ss_pred EE-EEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcc
Q psy4393 177 CR-IWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVT 229 (247)
Q Consensus 177 i~-v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~ 229 (247)
+- .++-+.. .......+ .=.|+|..++.++.+|+|+--|-+...
T Consensus 179 lD~~fnwk~~--~a~rs~~k-------sgv~~g~~F~~~~~~GtVyyvdq~g~~ 223 (1416)
T KOG3617|consen 179 LDEPFNWKES--LAERSDEK-------SGVPKGTEFLFAGKSGTVYYVDQNGRQ 223 (1416)
T ss_pred hcccccCccc--hhhccccc-------cCCCCCcEEEEEcCCceEEEEcCCCcE
Confidence 22 2221110 00000001 124777788888888888888754443
No 333
>KOG4640|consensus
Probab=98.32 E-value=3.9e-06 Score=69.45 Aligned_cols=93 Identities=20% Similarity=0.292 Sum_probs=77.1
Q ss_pred cEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeE-EEEECCCCCEEEEecCCCeEEEEeCCCceeeeee
Q psy4393 113 YVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVS-AVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 191 (247)
Q Consensus 113 ~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~-~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~ 191 (247)
.+.-+.|+|.-.++|++..+|.+-+..+. .+.+..++.+...++ +++|.|||+.||+|-.||+|++.|+.++..+..+
T Consensus 22 ~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~l~~~ 100 (665)
T KOG4640|consen 22 NIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGRLVSF 100 (665)
T ss_pred ceEEEEEcCccchhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCCceecc
Confidence 46678999999999999999999999887 777888886666676 9999999999999999999999999998877664
Q ss_pred ccCCCCCeEEEEECC
Q psy4393 192 IDDDNPPVSFVKFSP 206 (247)
Q Consensus 192 ~~~~~~~v~~~~~s~ 206 (247)
.......|..+-|++
T Consensus 101 ~~s~e~~is~~~w~~ 115 (665)
T KOG4640|consen 101 LFSVETDISKGIWDR 115 (665)
T ss_pred ccccccchheeeccc
Confidence 333345667777763
No 334
>KOG3617|consensus
Probab=98.28 E-value=2.7e-05 Score=66.99 Aligned_cols=70 Identities=16% Similarity=0.303 Sum_probs=62.4
Q ss_pred eEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECC
Q psy4393 30 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELS 99 (247)
Q Consensus 30 v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~ 99 (247)
+++++|+|..-.|+.|-..|.+.+|...+.+.-.....|..++..+.|+|+|..++++..-|.+.+|...
T Consensus 62 atSLCWHpe~~vLa~gwe~g~~~v~~~~~~e~htv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d 131 (1416)
T KOG3617|consen 62 ATSLCWHPEEFVLAQGWEMGVSDVQKTNTTETHTVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYD 131 (1416)
T ss_pred hhhhccChHHHHHhhccccceeEEEecCCceeeeeccCCCCCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence 5679999998889999999999999987776666677899999999999999999999999999999765
No 335
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=98.28 E-value=0.00013 Score=59.08 Aligned_cols=193 Identities=19% Similarity=0.272 Sum_probs=104.0
Q ss_pred CCCCCEEEEEe---------CCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceEEEE
Q psy4393 36 SPNGEWLASSS---------ADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKT 106 (247)
Q Consensus 36 s~~~~~l~~~~---------~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~ 106 (247)
|||+++++... ..+.+.+||+.+++....... ...+....|+|+|+.++... ++.|.+++..++...+.
T Consensus 1 S~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~~~~~l~~~-~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~~~~~l 78 (353)
T PF00930_consen 1 SPDGKFVLFATNYTKQWRHSFKGDYYIYDIETGEITPLTPP-PPKLQDAKWSPDGKYIAFVR-DNNLYLRDLATGQETQL 78 (353)
T ss_dssp -TTSSEEEEEEEEEEESSSEEEEEEEEEETTTTEEEESS-E-ETTBSEEEE-SSSTEEEEEE-TTEEEEESSTTSEEEES
T ss_pred CCCCCeEEEEECcEEeeeeccceeEEEEecCCCceEECcCC-ccccccceeecCCCeeEEEe-cCceEEEECCCCCeEEe
Confidence 57888776532 235678899888665443332 55688899999999988775 57899998877654332
Q ss_pred EecC-----------------CccEEEEEEcCCCCEEEEeeCC-CCE---------------------------------
Q psy4393 107 LKGH-----------------SNYVFCCNFNPQSNLIVSGSFD-ESV--------------------------------- 135 (247)
Q Consensus 107 ~~~~-----------------~~~v~~~~~~~~~~~l~~~~~d-~~i--------------------------------- 135 (247)
.... -+.-..+.|+|+++.|+....| ..+
T Consensus 79 T~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~~~~~~~~~~~~yp~~~~~~YPk~G~~np~v 158 (353)
T PF00930_consen 79 TTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFDEREVPEYPLPDYSPPDSQYPEVESIRYPKAGDPNPRV 158 (353)
T ss_dssp ES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEEEEEESSSTESS-EEEEEE--BTTS---EE
T ss_pred ccccceeEEcCccceeccccccccccceEECCCCCEEEEEEECCcCCceEEeeccCCccccCCcccccccCCCCCcCCce
Confidence 2111 1112457799999988876433 222
Q ss_pred --EEEECCCCeEEEe--e---cCCCCCeEEEEECCCCCEEEEec--CCC---eEEEEeCCCceeeeeeccCCCC---CeE
Q psy4393 136 --RIWDVRTGKCLKT--L---PAHSDPVSAVHFNRDGSLIVSSS--YDG---LCRIWDTASGQCLKTLIDDDNP---PVS 200 (247)
Q Consensus 136 --~v~d~~~~~~~~~--~---~~~~~~i~~~~~~~~~~~l~~~~--~dg---~i~v~d~~~~~~~~~~~~~~~~---~v~ 200 (247)
.++|+.+++.... . ......+..+.|.+++..++..- .+. .+.++|..+++........... ...
T Consensus 159 ~l~v~~~~~~~~~~~~~~~~~~~~~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~~~e~~~~Wv~~~~ 238 (353)
T PF00930_consen 159 SLFVVDLASGKTTELDPPNSLNPQDYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGETRVVLEETSDGWVDVYD 238 (353)
T ss_dssp EEEEEESSSTCCCEE---HHHHTSSEEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEECTTTCEEEEEEESSSSSSSSS
T ss_pred EEEEEECCCCcEEEeeeccccCCCccCcccceecCCCcEEEEEEcccCCCEEEEEEEECCCCceeEEEEecCCcceeeec
Confidence 2233333322110 0 11223467788888888443332 222 4667787766543322221111 112
Q ss_pred EEEEC-CCCC-EEEEEEcCC--eEEEEECCCcce
Q psy4393 201 FVKFS-PNGK-YILAATLDN--TLKLWDSKVVTP 230 (247)
Q Consensus 201 ~~~~s-~~~~-~l~~~~~dg--~i~vwd~~~~~~ 230 (247)
...|. +++. +|.....|| .|.+++...+.+
T Consensus 239 ~~~~~~~~~~~~l~~s~~~G~~hly~~~~~~~~~ 272 (353)
T PF00930_consen 239 PPHFLGPDGNEFLWISERDGYRHLYLYDLDGGKP 272 (353)
T ss_dssp EEEE-TTTSSEEEEEEETTSSEEEEEEETTSSEE
T ss_pred ccccccCCCCEEEEEEEcCCCcEEEEEcccccce
Confidence 34443 5554 444555677 566666666553
No 336
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=98.27 E-value=0.00071 Score=56.03 Aligned_cols=146 Identities=22% Similarity=0.242 Sum_probs=81.6
Q ss_pred EEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCc
Q psy4393 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSG 101 (247)
Q Consensus 22 ~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~ 101 (247)
.+....-....+.++|+|+.++.+ .+|.-.++.....+... . +...++.|.+. +.+++-..+..|.++.--+.
T Consensus 27 ~lg~~~~~p~~ls~npngr~v~V~-g~geY~iyt~~~~r~k~--~---G~g~~~vw~~~-n~yAv~~~~~~I~I~kn~~~ 99 (443)
T PF04053_consen 27 ELGSCEIYPQSLSHNPNGRFVLVC-GDGEYEIYTALAWRNKA--F---GSGLSFVWSSR-NRYAVLESSSTIKIYKNFKN 99 (443)
T ss_dssp EEEE-SS--SEEEE-TTSSEEEEE-ETTEEEEEETTTTEEEE--E---EE-SEEEE-TS-SEEEEE-TTS-EEEEETTEE
T ss_pred cCCCCCcCCeeEEECCCCCEEEEE-cCCEEEEEEccCCcccc--c---CceeEEEEecC-ccEEEEECCCeEEEEEcCcc
Confidence 333445567899999999998885 57888888754433322 1 22446789984 45777767888999633222
Q ss_pred eEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCCCeEEEEe
Q psy4393 102 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181 (247)
Q Consensus 102 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d 181 (247)
...+.++... .+..+ |. |.++...+. +.|.+||..+++.+..+... +|..+.|++++.+++..+.+ .+.+++
T Consensus 100 ~~~k~i~~~~-~~~~I-f~--G~LL~~~~~-~~i~~yDw~~~~~i~~i~v~--~vk~V~Ws~~g~~val~t~~-~i~il~ 171 (443)
T PF04053_consen 100 EVVKSIKLPF-SVEKI-FG--GNLLGVKSS-DFICFYDWETGKLIRRIDVS--AVKYVIWSDDGELVALVTKD-SIYILK 171 (443)
T ss_dssp -TT-----SS--EEEE-E---SSSEEEEET-TEEEEE-TTT--EEEEESS---E-EEEEE-TTSSEEEEE-S--SEEEEE
T ss_pred ccceEEcCCc-ccceE-Ec--CcEEEEECC-CCEEEEEhhHcceeeEEecC--CCcEEEEECCCCEEEEEeCC-eEEEEE
Confidence 2222333221 22222 22 676766654 47999999999999988754 38899999999999888755 455554
Q ss_pred C
Q psy4393 182 T 182 (247)
Q Consensus 182 ~ 182 (247)
.
T Consensus 172 ~ 172 (443)
T PF04053_consen 172 Y 172 (443)
T ss_dssp E
T ss_pred e
Confidence 3
No 337
>KOG3621|consensus
Probab=98.27 E-value=5.4e-05 Score=63.69 Aligned_cols=117 Identities=16% Similarity=0.177 Sum_probs=88.4
Q ss_pred CCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEe-cccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceEE
Q psy4393 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS-GHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCL 104 (247)
Q Consensus 26 h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~ 104 (247)
|...|.=-+++..+++++.|+.-|.+++|+-..+.....-. +....+..+..+++..++|.|+..|.|.++.+..+..-
T Consensus 32 ~~~~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~ 111 (726)
T KOG3621|consen 32 FPARVKLTCVDATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPR 111 (726)
T ss_pred CcceEEEEEeecCCceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCC
Confidence 44556666788889999999999999999876655433222 23444566778888888999999999999987653211
Q ss_pred --EEE----ecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCC
Q psy4393 105 --KTL----KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 142 (247)
Q Consensus 105 --~~~----~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~ 142 (247)
..+ +.|...|.+++|++++..+++|...|.|.+-.+.+
T Consensus 112 ~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s 155 (726)
T KOG3621|consen 112 DLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDS 155 (726)
T ss_pred cceeeccccccCCceEEEEEecccccEEeecCCCceEEEEEech
Confidence 111 23567899999999999999999999998887766
No 338
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=98.24 E-value=0.00011 Score=64.13 Aligned_cols=140 Identities=24% Similarity=0.336 Sum_probs=97.7
Q ss_pred CCEEEEE-cCCCeEEEEECCCceEEEEEecCCcc-EEEEEEcCC-------CCEEEEeeCCCCEEEEECCCCe-EEEeec
Q psy4393 81 SRLLVSG-SDDKTLKIWELSSGKCLKTLKGHSNY-VFCCNFNPQ-------SNLIVSGSFDESVRIWDVRTGK-CLKTLP 150 (247)
Q Consensus 81 ~~~l~~~-~~d~~i~v~d~~~~~~~~~~~~~~~~-v~~~~~~~~-------~~~l~~~~~d~~i~v~d~~~~~-~~~~~~ 150 (247)
.++|+.. .....++-.|++.|+.+..++.+... |. .+.|+ ....+.|-.+..+..||.|... .+..-.
T Consensus 493 ~~mil~~~~~~~~ly~mDLe~GKVV~eW~~~~~~~v~--~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~ 570 (794)
T PF08553_consen 493 RNMILLDPNNPNKLYKMDLERGKVVEEWKVHDDIPVV--DIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQ 570 (794)
T ss_pred cceEeecCCCCCceEEEecCCCcEEEEeecCCCccee--EecccccccccCCCceEEEECCCceEEeccCCCCCceeecc
Confidence 3444433 34567888899999999888877643 43 34443 2345667778899999998643 111111
Q ss_pred ----CCCCCeEEEEECCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEEC
Q psy4393 151 ----AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225 (247)
Q Consensus 151 ----~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~ 225 (247)
......+|++-+.+| ++|+|+.+|.|++||- .++.-++.+..-+.||..+..+.||++|++.+ +..|.+++.
T Consensus 571 ~k~Y~~~~~Fs~~aTt~~G-~iavgs~~G~IRLyd~-~g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc-~tyLlLi~t 646 (794)
T PF08553_consen 571 SKQYSSKNNFSCFATTEDG-YIAVGSNKGDIRLYDR-LGKRAKTALPGLGDPIIGIDVTADGKWILATC-KTYLLLIDT 646 (794)
T ss_pred ccccccCCCceEEEecCCc-eEEEEeCCCcEEeecc-cchhhhhcCCCCCCCeeEEEecCCCcEEEEee-cceEEEEEE
Confidence 123356788877777 5899999999999994 44444555556678999999999999998877 567777774
No 339
>PRK02888 nitrous-oxide reductase; Validated
Probab=98.19 E-value=0.00085 Score=57.00 Aligned_cols=122 Identities=12% Similarity=0.189 Sum_probs=75.5
Q ss_pred CeEEEEecCC-----CeEEEEEecccCCeEEEEECCCCCEEEEEcC-CCeEEEEECCCceE------------EEEEecC
Q psy4393 49 KLIKIWGAYD-----GKFEKTISGHKLGISDVAWSSDSRLLVSGSD-DKTLKIWELSSGKC------------LKTLKGH 110 (247)
Q Consensus 49 g~v~iw~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~v~d~~~~~~------------~~~~~~~ 110 (247)
+.|.+.|..+ ......+. -......+.++|||+++++++. +..+.++|+.+.+. .....-.
T Consensus 296 n~V~VID~~t~~~~~~~v~~yIP-VGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~vvaevevG 374 (635)
T PRK02888 296 SKVPVVDGRKAANAGSALTRYVP-VPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAEPELG 374 (635)
T ss_pred CEEEEEECCccccCCcceEEEEE-CCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCCccceEEEeeccC
Confidence 3466666554 22333332 2344677899999998876655 88999999987442 2233322
Q ss_pred CccEEEEEEcCCCCEEEEeeCCCCEEEEECCC----------CeEEEeecCCCCCeEEE-----EECCCCCEEEEec
Q psy4393 111 SNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT----------GKCLKTLPAHSDPVSAV-----HFNRDGSLIVSSS 172 (247)
Q Consensus 111 ~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~----------~~~~~~~~~~~~~i~~~-----~~~~~~~~l~~~~ 172 (247)
.++ ....|+++|+...+-.-|..|..||+.. ...+..+..|-.+-.-. .-.|+|++|++..
T Consensus 375 lGP-LHTaFDg~G~aytslf~dsqv~kwn~~~a~~~~~g~~~~~v~~k~dV~y~pgh~~~~~g~t~~~dgk~l~~~n 450 (635)
T PRK02888 375 LGP-LHTAFDGRGNAYTTLFLDSQIVKWNIEAAIRAYKGEKVDPIVQKLDVHYQPGHNHASMGETKEADGKWLVSLN 450 (635)
T ss_pred CCc-ceEEECCCCCEEEeEeecceeEEEehHHHHHHhccccCCcceecccCCCccceeeecCCCcCCCCCCEEEEcc
Confidence 333 3568999998888888899999999875 22344444443332211 1256788877653
No 340
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=98.18 E-value=0.0014 Score=55.37 Aligned_cols=193 Identities=17% Similarity=0.190 Sum_probs=114.4
Q ss_pred CCEEEEEeCCCeEEEEecCCCeEEEEEecccC------CeE--EEEECCCCCEEEEEcCCCeEEEEECCCceEEEEEecC
Q psy4393 39 GEWLASSSADKLIKIWGAYDGKFEKTISGHKL------GIS--DVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGH 110 (247)
Q Consensus 39 ~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~------~v~--~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~ 110 (247)
+..++.++.++.|.-.|..+++.......... .+. .+... ++..++.++.++.+.-+|.++++.+......
T Consensus 61 ~g~vy~~~~~g~l~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~g~~~~-~~~~V~v~~~~g~v~AlD~~TG~~~W~~~~~ 139 (488)
T cd00216 61 DGDMYFTTSHSALFALDAATGKVLWRYDPKLPADRGCCDVVNRGVAYW-DPRKVFFGTFDGRLVALDAETGKQVWKFGNN 139 (488)
T ss_pred CCEEEEeCCCCcEEEEECCCChhhceeCCCCCccccccccccCCcEEc-cCCeEEEecCCCeEEEEECCCCCEeeeecCC
Confidence 44566677789999999988887766543221 000 01111 2267778888999999999999887665433
Q ss_pred Ccc--EEEEEEcC--CCCEEEEee---------CCCCEEEEECCCCeEEEeecCCCC--------------------Ce-
Q psy4393 111 SNY--VFCCNFNP--QSNLIVSGS---------FDESVRIWDVRTGKCLKTLPAHSD--------------------PV- 156 (247)
Q Consensus 111 ~~~--v~~~~~~~--~~~~l~~~~---------~d~~i~v~d~~~~~~~~~~~~~~~--------------------~i- 156 (247)
... -..+.-+| .+..++.++ .++.+..+|..+|+.+........ .+
T Consensus 140 ~~~~~~~~i~ssP~v~~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~~vw 219 (488)
T cd00216 140 DQVPPGYTMTGAPTIVKKLVIIGSSGAEFFACGVRGALRAYDVETGKLLWRFYTTEPDPNAFPTWGPDRQMWGPGGGTSW 219 (488)
T ss_pred CCcCcceEecCCCEEECCEEEEeccccccccCCCCcEEEEEECCCCceeeEeeccCCCcCCCCCCCCCcceecCCCCCcc
Confidence 220 00011111 123454543 357899999999988776543211 01
Q ss_pred EEEEECCCCCEEEEecCCC------------------eEEEEeCCCceeeeeeccCCC---------CCeEEEEE-CCCC
Q psy4393 157 SAVHFNRDGSLIVSSSYDG------------------LCRIWDTASGQCLKTLIDDDN---------PPVSFVKF-SPNG 208 (247)
Q Consensus 157 ~~~~~~~~~~~l~~~~~dg------------------~i~v~d~~~~~~~~~~~~~~~---------~~v~~~~~-s~~~ 208 (247)
....+++.+..++.++.++ .+..+|..+++.+=.+..... .++. ... .-++
T Consensus 220 ~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~~W~~~~~~~~~~~~~~~s~p~~-~~~~~~~g 298 (488)
T cd00216 220 ASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKVKWFYQTTPHDLWDYDGPNQPSL-ADIKPKDG 298 (488)
T ss_pred CCeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCCEEEEeeCCCCCCcccccCCCCeE-EeccccCC
Confidence 1244555566777776554 688889998876533221110 1110 111 1233
Q ss_pred C---EEEEEEcCCeEEEEECCCcceEEE
Q psy4393 209 K---YILAATLDNTLKLWDSKVVTPAII 233 (247)
Q Consensus 209 ~---~l~~~~~dg~i~vwd~~~~~~~~~ 233 (247)
. .++.++.+|.+...|.++++++=.
T Consensus 299 ~~~~~V~~g~~~G~l~ald~~tG~~~W~ 326 (488)
T cd00216 299 KPVPAIVHAPKNGFFYVLDRTTGKLISA 326 (488)
T ss_pred CeeEEEEEECCCceEEEEECCCCcEeeE
Confidence 3 677888899999999999876644
No 341
>PRK13616 lipoprotein LpqB; Provisional
Probab=98.15 E-value=0.00062 Score=58.51 Aligned_cols=186 Identities=15% Similarity=0.195 Sum_probs=101.0
Q ss_pred CCeEEEEECCCCCEEEEEe------CCCeEEEEecC-CCeEEEEEecccCCeEEEEECCCCCEEEEEcCC----------
Q psy4393 28 KAVSSVKFSPNGEWLASSS------ADKLIKIWGAY-DGKFEKTISGHKLGISDVAWSSDSRLLVSGSDD---------- 90 (247)
Q Consensus 28 ~~v~~~~~s~~~~~l~~~~------~dg~v~iw~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---------- 90 (247)
..+.+.+++|+|+.++... .|..-.+|-.. .+.......+ ...+...|+|+|+.+.+....
T Consensus 350 ~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg~~~~lt~g--~~~t~PsWspDG~~lw~v~dg~~~~~v~~~~ 427 (591)
T PRK13616 350 GNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGGVAVQVLEG--HSLTRPSWSLDADAVWVVVDGNTVVRVIRDP 427 (591)
T ss_pred cCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCCCcceeeecC--CCCCCceECCCCCceEEEecCcceEEEeccC
Confidence 3577889999999887654 24444455332 2223222332 237788999998877776432
Q ss_pred --CeEEEEECCCceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEE---EECCCCeE-E---EeecC-CCCCeEEEE
Q psy4393 91 --KTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI---WDVRTGKC-L---KTLPA-HSDPVSAVH 160 (247)
Q Consensus 91 --~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v---~d~~~~~~-~---~~~~~-~~~~i~~~~ 160 (247)
+.+.+.++..+.... .....|..+.|+|||..++... ++.|++ -....|.. + ..+.. -...+..+.
T Consensus 428 ~~gql~~~~vd~ge~~~---~~~g~Issl~wSpDG~RiA~i~-~g~v~Va~Vvr~~~G~~~l~~~~~l~~~l~~~~~~l~ 503 (591)
T PRK13616 428 ATGQLARTPVDASAVAS---RVPGPISELQLSRDGVRAAMII-GGKVYLAVVEQTEDGQYALTNPREVGPGLGDTAVSLD 503 (591)
T ss_pred CCceEEEEeccCchhhh---ccCCCcCeEEECCCCCEEEEEE-CCEEEEEEEEeCCCCceeecccEEeecccCCccccce
Confidence 223333333322211 2244688999999999888765 466666 44334431 1 11222 223357789
Q ss_pred ECCCCCEEEEecCCCeEEEE--eCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEE
Q psy4393 161 FNRDGSLIVSSSYDGLCRIW--DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 222 (247)
Q Consensus 161 ~~~~~~~l~~~~~dg~i~v~--d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v 222 (247)
|..++.++ ++..++...+| ++...............++..++-+++ .++.++.+|.+.+
T Consensus 504 W~~~~~L~-V~~~~~~~~v~~v~vDG~~~~~~~~~n~~~~v~~vaa~~~--~iyv~~~~g~~~l 564 (591)
T PRK13616 504 WRTGDSLV-VGRSDPEHPVWYVNLDGSNSDALPSRNLSAPVVAVAASPS--TVYVTDARAVLQL 564 (591)
T ss_pred EecCCEEE-EEecCCCCceEEEecCCccccccCCCCccCceEEEecCCc--eEEEEcCCceEEe
Confidence 99988854 55544444444 444322111011112345666666653 4556666664444
No 342
>KOG1832|consensus
Probab=98.15 E-value=1.7e-06 Score=74.41 Aligned_cols=134 Identities=22% Similarity=0.335 Sum_probs=104.0
Q ss_pred EEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCCC--eEEEEe
Q psy4393 104 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG--LCRIWD 181 (247)
Q Consensus 104 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg--~i~v~d 181 (247)
.+.++.+.....|++|+.+.+.++.|+..|.|++|+..+|........|..+++-+.-+.+|..+++.+.-. ...+|+
T Consensus 1094 w~~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaLW~ 1173 (1516)
T KOG1832|consen 1094 WRSFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSALWD 1173 (1516)
T ss_pred chhhhccccceeeEEeecCCceEEeeeccceEEEEEccCccccccccccccccccccccCCcceeeeeccccCchHHHhc
Confidence 445666777889999999999999999999999999999998888899999999999999998777655433 456898
Q ss_pred CCCc-eeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcceEEEEccCCcccc
Q psy4393 182 TASG-QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTPLNLNY 242 (247)
Q Consensus 182 ~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~ 242 (247)
+.+. ...+.+. . -.++.|+..-++-+.|+....+.+||.++..|+.+|..+...++
T Consensus 1174 ~~s~~~~~Hsf~-e----d~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~tylt~~~~~~ 1230 (1516)
T KOG1832|consen 1174 ASSTGGPRHSFD-E----DKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQTYLTDTVTSS 1230 (1516)
T ss_pred cccccCcccccc-c----cceeehhhhHHHHHhcccccceEEEecccCcHHHHhcCcchhhh
Confidence 8652 2233322 1 24577888766667777778999999999998888766655443
No 343
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=98.10 E-value=0.0027 Score=50.06 Aligned_cols=206 Identities=13% Similarity=0.111 Sum_probs=118.9
Q ss_pred EEEECCCCCEEEEEe--CCCeEEEEecCCCeEEEEEecccCCeEEEEECCC-CCEEEEEcCCCeEEEEECC-CceEEEEE
Q psy4393 32 SVKFSPNGEWLASSS--ADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD-SRLLVSGSDDKTLKIWELS-SGKCLKTL 107 (247)
Q Consensus 32 ~~~~s~~~~~l~~~~--~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~v~d~~-~~~~~~~~ 107 (247)
.++++.||++++... ---.|.|-|+..++....+... ++..+ .|. .+.+.+.+.||.+.-..+. .|+.....
T Consensus 99 ~~~ls~dgk~~~V~N~TPa~SVtVVDl~~~kvv~ei~~P--GC~~i--yP~~~~~F~~lC~DGsl~~v~Ld~~Gk~~~~~ 174 (342)
T PF06433_consen 99 MFALSADGKFLYVQNFTPATSVTVVDLAAKKVVGEIDTP--GCWLI--YPSGNRGFSMLCGDGSLLTVTLDADGKEAQKS 174 (342)
T ss_dssp GEEE-TTSSEEEEEEESSSEEEEEEETTTTEEEEEEEGT--SEEEE--EEEETTEEEEEETTSCEEEEEETSTSSEEEEE
T ss_pred ceEEccCCcEEEEEccCCCCeEEEEECCCCceeeeecCC--CEEEE--EecCCCceEEEecCCceEEEEECCCCCEeEee
Confidence 457888998877644 3357888999888887777532 23222 222 2457777788888777776 34443221
Q ss_pred ----ecCCccE-EEEEEcCCCCEEEEeeCCCCEEEEECCCCeEE--EeecCC----------CCCeEEEEECCCCCEEEE
Q psy4393 108 ----KGHSNYV-FCCNFNPQSNLIVSGSFDESVRIWDVRTGKCL--KTLPAH----------SDPVSAVHFNRDGSLIVS 170 (247)
Q Consensus 108 ----~~~~~~v-~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~--~~~~~~----------~~~i~~~~~~~~~~~l~~ 170 (247)
....+++ ..-.+...+..++..+.+|.|+-.|+...... ..+..- .+...-+++++....|++
T Consensus 175 t~~F~~~~dp~f~~~~~~~~~~~~~F~Sy~G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG~Q~~A~~~~~~rlyv 254 (342)
T PF06433_consen 175 TKVFDPDDDPLFEHPAYSRDGGRLYFVSYEGNVYSADLSGDSAKFGKPWSLLTDAEKADGWRPGGWQLIAYHAASGRLYV 254 (342)
T ss_dssp EEESSTTTS-B-S--EEETTTTEEEEEBTTSEEEEEEETTSSEEEEEEEESS-HHHHHTTEEE-SSS-EEEETTTTEEEE
T ss_pred ccccCCCCcccccccceECCCCeEEEEecCCEEEEEeccCCcccccCcccccCccccccCcCCcceeeeeeccccCeEEE
Confidence 1111222 22334445556666788898888888755421 112110 122334677775555544
Q ss_pred ecC---CC-------eEEEEeCCCceeeeeeccCCCCCeEEEEECCCCC-EEEEEE-cCCeEEEEECCCcceEEEEccCC
Q psy4393 171 SSY---DG-------LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK-YILAAT-LDNTLKLWDSKVVTPAIICSTPL 238 (247)
Q Consensus 171 ~~~---dg-------~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~-~dg~i~vwd~~~~~~~~~~~~~~ 238 (247)
--. ++ .|.++|+.+++.+.++...+ ++.+++.+.+.+ +|++.+ .++.+.+||..+++++.....-.
T Consensus 255 LMh~g~~gsHKdpgteVWv~D~~t~krv~Ri~l~~--~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~~~~~~lG 332 (342)
T PF06433_consen 255 LMHQGGEGSHKDPGTEVWVYDLKTHKRVARIPLEH--PIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGKLVRSIEQLG 332 (342)
T ss_dssp EEEE--TT-TTS-EEEEEEEETTTTEEEEEEEEEE--EESEEEEESSSS-EEEEEETTTTEEEEEETTT--EEEEE---S
T ss_pred EecCCCCCCccCCceEEEEEECCCCeEEEEEeCCC--ccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCcEEeehhccC
Confidence 211 11 58888999999888775432 456788888766 665554 57899999999998887766554
Q ss_pred cccce
Q psy4393 239 NLNYF 243 (247)
Q Consensus 239 ~~~~~ 243 (247)
+..++
T Consensus 333 ~~~~l 337 (342)
T PF06433_consen 333 ETPTL 337 (342)
T ss_dssp SS--E
T ss_pred CCceE
Confidence 44333
No 344
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=98.08 E-value=0.0043 Score=51.42 Aligned_cols=199 Identities=18% Similarity=0.198 Sum_probs=107.1
Q ss_pred eEEEEECCCCCEEEEE-eCCC----eEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCC-----------CeE
Q psy4393 30 VSSVKFSPNGEWLASS-SADK----LIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDD-----------KTL 93 (247)
Q Consensus 30 v~~~~~s~~~~~l~~~-~~dg----~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----------~~i 93 (247)
+....++|+|+++|.+ +..| .++++|+.+++........ .....+.|.++++.++....+ ..|
T Consensus 126 ~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~-~~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v 204 (414)
T PF02897_consen 126 LGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIEN-PKFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQV 204 (414)
T ss_dssp EEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEE-EESEEEEECTTSSEEEEEECSTTTSS-CCGCCEEE
T ss_pred eeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCcccc-cccceEEEeCCCCEEEEEEeCcccccccCCCCcEE
Confidence 3467899999998754 3334 5999999998765432111 112238999998877655432 247
Q ss_pred EEEECCCceE--EEEEecCCcc--EEEEEEcCCCCEEEEeeCC----CCEEEEECCCC----eEEEeecCC-CCCeEEEE
Q psy4393 94 KIWELSSGKC--LKTLKGHSNY--VFCCNFNPQSNLIVSGSFD----ESVRIWDVRTG----KCLKTLPAH-SDPVSAVH 160 (247)
Q Consensus 94 ~v~d~~~~~~--~~~~~~~~~~--v~~~~~~~~~~~l~~~~~d----~~i~v~d~~~~----~~~~~~~~~-~~~i~~~~ 160 (247)
+.|.+.+... ...+...... ...+..++++++++..... ..+.+.|+..+ .....+... .+....+.
T Consensus 205 ~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l~~~~~~~~~~v~ 284 (414)
T PF02897_consen 205 YRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLLSPREDGVEYYVD 284 (414)
T ss_dssp EEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEEEESSSS-EEEEE
T ss_pred EEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcCCcEEEeCCCCceEEEEE
Confidence 7888776532 2334333322 5577889999987754322 34788888764 222333222 22223333
Q ss_pred ECCCCCEEEEec---CCCeEEEEeCCCcee--eeeeccCCCCCeEEEEECCCCCEEEEEE-cCC--eEEEEECC-Ccce
Q psy4393 161 FNRDGSLIVSSS---YDGLCRIWDTASGQC--LKTLIDDDNPPVSFVKFSPNGKYILAAT-LDN--TLKLWDSK-VVTP 230 (247)
Q Consensus 161 ~~~~~~~l~~~~---~dg~i~v~d~~~~~~--~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg--~i~vwd~~-~~~~ 230 (247)
.. .+.+++... ..+.|...++..... .......+...+.-..+...+.+|+... .++ +|+++|.. ....
T Consensus 285 ~~-~~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~Lvl~~~~~~~~~l~v~~~~~~~~~ 362 (414)
T PF02897_consen 285 HH-GDRLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPEDEDVSLEDVSLFKDYLVLSYRENGSSRLRVYDLDDGKES 362 (414)
T ss_dssp EE-TTEEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--SSSEEEEEEEEETTEEEEEEEETTEEEEEEEETT-TEEE
T ss_pred cc-CCEEEEeeCCCCCCcEEEEecccccccccceeEEcCCCCceeEEEEEEECCEEEEEEEECCccEEEEEECCCCcEE
Confidence 33 444444332 235677777776542 1212222222222233344455666554 444 78999998 4433
No 345
>KOG4640|consensus
Probab=98.07 E-value=3.9e-05 Score=63.74 Aligned_cols=94 Identities=21% Similarity=0.345 Sum_probs=75.4
Q ss_pred cCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceEEEEEecCCccEE-EEEEcCCCCEEEEeeCCCCEEEEECCCCeEEE
Q psy4393 69 KLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVF-CCNFNPQSNLIVSGSFDESVRIWDVRTGKCLK 147 (247)
Q Consensus 69 ~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~ 147 (247)
...+..+.|+|.-..||.+..+|.+.++.+. .+.+..+..+...+. +++|.|||+++|.|-.||.|++.|...+..+.
T Consensus 20 ~~~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~l~ 98 (665)
T KOG4640|consen 20 PINIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGRLV 98 (665)
T ss_pred ccceEEEEEcCccchhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCCcee
Confidence 3457778999999999999999999888887 566667765555555 99999999999999999999999999987766
Q ss_pred eec-CCCCCeEEEEECC
Q psy4393 148 TLP-AHSDPVSAVHFNR 163 (247)
Q Consensus 148 ~~~-~~~~~i~~~~~~~ 163 (247)
.+. .....|.++.|++
T Consensus 99 ~~~~s~e~~is~~~w~~ 115 (665)
T KOG4640|consen 99 SFLFSVETDISKGIWDR 115 (665)
T ss_pred ccccccccchheeeccc
Confidence 531 2345677777764
No 346
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.07 E-value=0.0016 Score=49.69 Aligned_cols=189 Identities=17% Similarity=0.273 Sum_probs=108.3
Q ss_pred EECCCCCEEEEEeC-----CCeEEEEecCCC-eEEEEEecccCCeEEEEECCCCCEEEEEcCC-----------------
Q psy4393 34 KFSPNGEWLASSSA-----DKLIKIWGAYDG-KFEKTISGHKLGISDVAWSSDSRLLVSGSDD----------------- 90 (247)
Q Consensus 34 ~~s~~~~~l~~~~~-----dg~v~iw~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----------------- 90 (247)
.|||||.+|++.-. -|.|-|||...+ .....+..|..+-..+.|.+||+.++.+...
T Consensus 120 vfs~dG~~LYATEndfd~~rGViGvYd~r~~fqrvgE~~t~GiGpHev~lm~DGrtlvvanGGIethpdfgR~~lNldsM 199 (366)
T COG3490 120 VFSPDGRLLYATENDFDPNRGVIGVYDAREGFQRVGEFSTHGIGPHEVTLMADGRTLVVANGGIETHPDFGRTELNLDSM 199 (366)
T ss_pred ccCCCCcEEEeecCCCCCCCceEEEEecccccceecccccCCcCcceeEEecCCcEEEEeCCceecccccCccccchhhc
Confidence 59999999986533 367899998643 3345677788888999999999998876430
Q ss_pred -CeEEEEECCCceEEEEEe----cCCccEEEEEEcCCCCEEEEeeCCCC-----EEEEECCCCeEEEeecCC-------C
Q psy4393 91 -KTLKIWELSSGKCLKTLK----GHSNYVFCCNFNPQSNLIVSGSFDES-----VRIWDVRTGKCLKTLPAH-------S 153 (247)
Q Consensus 91 -~~i~v~d~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~d~~-----i~v~d~~~~~~~~~~~~~-------~ 153 (247)
..+.+.|..+++.+.+.. .+.-.+..++..++|..++.+-..|. .-+=-.+.++.+..+... .
T Consensus 200 ePSlvlld~atG~liekh~Lp~~l~~lSiRHld~g~dgtvwfgcQy~G~~~d~ppLvg~~~~g~~l~~~~~pee~~~~~a 279 (366)
T COG3490 200 EPSLVLLDAATGNLIEKHTLPASLRQLSIRHLDIGRDGTVWFGCQYRGPRNDLPPLVGHFRKGEPLEFLDLPEEQTAAFA 279 (366)
T ss_pred CccEEEEeccccchhhhccCchhhhhcceeeeeeCCCCcEEEEEEeeCCCccCCcceeeccCCCcCcccCCCHHHHHHHH
Confidence 123344444444332221 12334677777777766554322211 000011122222222211 2
Q ss_pred CCeEEEEECCCCCEEEEe-cCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCC
Q psy4393 154 DPVSAVHFNRDGSLIVSS-SYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKV 227 (247)
Q Consensus 154 ~~i~~~~~~~~~~~l~~~-~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~ 227 (247)
..|-+++.+.+..+++.. -..+...+||..++..+..-...+... + .+...-++..+.+|++.++....
T Consensus 280 nYigsiA~n~~~glV~lTSP~GN~~vi~da~tG~vv~~a~l~daaG---v--a~~~~gf~vssg~G~~~~~s~~~ 349 (366)
T COG3490 280 NYIGSIAANRRDGLVALTSPRGNRAVIWDAATGAVVSEAALPDAAG---V--AAAKGGFAVSSGQGRIIFYSRAA 349 (366)
T ss_pred hhhhheeecccCCeEEEecCCCCeEEEEEcCCCcEEeccccccccc---c--eeccCceEEecCCceEEeccccc
Confidence 346677777655555544 455578899999998654432222222 2 23344477777789999885443
No 347
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=98.05 E-value=0.0027 Score=48.36 Aligned_cols=169 Identities=11% Similarity=0.120 Sum_probs=92.0
Q ss_pred EEecccCCeEEEEECCCCC-EEEEEcCCCeEEEEECCCceEEEEEecC-CccEEEEEEcCCCCEEEEeeCCCCEEEEECC
Q psy4393 64 TISGHKLGISDVAWSSDSR-LLVSGSDDKTLKIWELSSGKCLKTLKGH-SNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141 (247)
Q Consensus 64 ~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~ 141 (247)
.+.+-...+..++|.|+.+ ++++....+.|..++. +|+.++.+.-. .+....+.+..++.++++.-.++.+.++++.
T Consensus 16 ~l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~-~G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~~ 94 (248)
T PF06977_consen 16 PLPGILDELSGLTYNPDTGTLFAVQDEPGEIYELSL-DGKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYIFTID 94 (248)
T ss_dssp E-TT--S-EEEEEEETTTTEEEEEETTTTEEEEEET-T--EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEEEEE-
T ss_pred ECCCccCCccccEEcCCCCeEEEEECCCCEEEEEcC-CCCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEEEEEe
Confidence 3444455699999999866 5566667788888886 46766665432 2446778888777777766668889999883
Q ss_pred CCe------EEEeec-----CCCCCeEEEEECCCCCEEEEecCCCeEEEEeCCC---ceeeeee-----c--cCCCCCeE
Q psy4393 142 TGK------CLKTLP-----AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS---GQCLKTL-----I--DDDNPPVS 200 (247)
Q Consensus 142 ~~~------~~~~~~-----~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~---~~~~~~~-----~--~~~~~~v~ 200 (247)
... ....+. .+...+..++|+|.+..|+++-+..-..+|.+.. ....... . ......+.
T Consensus 95 ~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~S 174 (248)
T PF06977_consen 95 DDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDLDDDKLFVRDLS 174 (248)
T ss_dssp ---TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE-HHHH-HT--SS---
T ss_pred ccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeeccccccccccceecccc
Confidence 321 111221 2344688999999877777776655555554432 1111100 1 11223467
Q ss_pred EEEECCCC-CEEEEEEcCCeEEEEECCCcceEEEE
Q psy4393 201 FVKFSPNG-KYILAATLDNTLKLWDSKVVTPAIIC 234 (247)
Q Consensus 201 ~~~~s~~~-~~l~~~~~dg~i~vwd~~~~~~~~~~ 234 (247)
.++++|.. .+++....+..|..+| ..++++-.+
T Consensus 175 ~l~~~p~t~~lliLS~es~~l~~~d-~~G~~~~~~ 208 (248)
T PF06977_consen 175 GLSYDPRTGHLLILSDESRLLLELD-RQGRVVSSL 208 (248)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEE--TT--EEEEE
T ss_pred ceEEcCCCCeEEEEECCCCeEEEEC-CCCCEEEEE
Confidence 78898875 4555666777888888 444444433
No 348
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=98.04 E-value=0.0058 Score=51.78 Aligned_cols=184 Identities=13% Similarity=0.184 Sum_probs=108.2
Q ss_pred CCeEEEEecCCCeEEEEEecccCC--------------------e-EEEEECCCCCEEEEEcCCC---------------
Q psy4393 48 DKLIKIWGAYDGKFEKTISGHKLG--------------------I-SDVAWSSDSRLLVSGSDDK--------------- 91 (247)
Q Consensus 48 dg~v~iw~~~~~~~~~~~~~~~~~--------------------v-~~~~~~~~~~~l~~~~~d~--------------- 91 (247)
+|.+.-+|..+++........... + ...+..+.+..++.++.++
T Consensus 174 ~g~v~alD~~TG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~~vw~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~ 253 (488)
T cd00216 174 RGALRAYDVETGKLLWRFYTTEPDPNAFPTWGPDRQMWGPGGGTSWASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNL 253 (488)
T ss_pred CcEEEEEECCCCceeeEeeccCCCcCCCCCCCCCcceecCCCCCccCCeeEeCCCCEEEEECCCCCCCccCCccCCCCCC
Confidence 577888898888877765432110 0 1233444566777776654
Q ss_pred ---eEEEEECCCceEEEEEecCCccEE--------E-EEEc-CCCC---EEEEeeCCCCEEEEECCCCeEEEeecCCCCC
Q psy4393 92 ---TLKIWELSSGKCLKTLKGHSNYVF--------C-CNFN-PQSN---LIVSGSFDESVRIWDVRTGKCLKTLPAHSDP 155 (247)
Q Consensus 92 ---~i~v~d~~~~~~~~~~~~~~~~v~--------~-~~~~-~~~~---~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~ 155 (247)
.+.-+|.++++..-..+....... . .... -++. .++.++.+|.+..+|.++|+.+.......
T Consensus 254 ~~~~l~Ald~~tG~~~W~~~~~~~~~~~~~~~s~p~~~~~~~~~g~~~~~V~~g~~~G~l~ald~~tG~~~W~~~~~~-- 331 (488)
T cd00216 254 YTDSIVALDADTGKVKWFYQTTPHDLWDYDGPNQPSLADIKPKDGKPVPAIVHAPKNGFFYVLDRTTGKLISARPEVE-- 331 (488)
T ss_pred ceeeEEEEcCCCCCEEEEeeCCCCCCcccccCCCCeEEeccccCCCeeEEEEEECCCceEEEEECCCCcEeeEeEeec--
Confidence 688899999988766542211110 0 0010 1232 57778889999999999999877654221
Q ss_pred eEEEEECCCCCEEEEe------------------cCCCeEEEEeCCCceeeeeeccCC-C------CCeEEEEECCCCCE
Q psy4393 156 VSAVHFNRDGSLIVSS------------------SYDGLCRIWDTASGQCLKTLIDDD-N------PPVSFVKFSPNGKY 210 (247)
Q Consensus 156 i~~~~~~~~~~~l~~~------------------~~dg~i~v~d~~~~~~~~~~~~~~-~------~~v~~~~~s~~~~~ 210 (247)
..+..+| ..++.+ ..+|.+...|+.+++.+=...... . .+...-.....+..
T Consensus 332 -~~~~~~~--~~vyv~~~~~~~~~~~~~~~~~~~~~~G~l~AlD~~tG~~~W~~~~~~~~~~~~~g~~~~~~~~~~~g~~ 408 (488)
T cd00216 332 -QPMAYDP--GLVYLGAFHIPLGLPPQKKKRCKKPGKGGLAALDPKTGKVVWEKREGTIRDSWNIGFPHWGGSLATAGNL 408 (488)
T ss_pred -cccccCC--ceEEEccccccccCcccccCCCCCCCceEEEEEeCCCCcEeeEeeCCccccccccCCcccCcceEecCCe
Confidence 1123344 223222 235778888888887542221110 0 11100001124578
Q ss_pred EEEEEcCCeEEEEECCCcceEEEEcc
Q psy4393 211 ILAATLDNTLKLWDSKVVTPAIICST 236 (247)
Q Consensus 211 l~~~~~dg~i~vwd~~~~~~~~~~~~ 236 (247)
|+.++.||.|+.+|.++++.+-..+.
T Consensus 409 v~~g~~dG~l~ald~~tG~~lW~~~~ 434 (488)
T cd00216 409 VFAGAADGYFRAFDATTGKELWKFRT 434 (488)
T ss_pred EEEECCCCeEEEEECCCCceeeEEEC
Confidence 88899999999999999887666554
No 349
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=98.03 E-value=0.0049 Score=50.48 Aligned_cols=200 Identities=16% Similarity=0.239 Sum_probs=127.4
Q ss_pred CeEEEEECCCCCEEEEEe-CCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEE-EEEcCCCeEEEEECCCceEEEE
Q psy4393 29 AVSSVKFSPNGEWLASSS-ADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLL-VSGSDDKTLKIWELSSGKCLKT 106 (247)
Q Consensus 29 ~v~~~~~s~~~~~l~~~~-~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~v~d~~~~~~~~~ 106 (247)
....+...+++..+.... ....+...+................-..++.++++..+ +....+..+.+.|..+......
T Consensus 32 ~~~~v~~~~~g~~~~v~~~~~~~~~~~~~~~n~~~~~~~~g~~~p~~i~v~~~~~~vyv~~~~~~~v~vid~~~~~~~~~ 111 (381)
T COG3391 32 GPGGVAVNPDGTQVYVANSGSNDVSVIDATSNTVTQSLSVGGVYPAGVAVNPAGNKVYVTTGDSNTVSVIDTATNTVLGS 111 (381)
T ss_pred CCceeEEcCccCEEEEEeecCceeeecccccceeeeeccCCCccccceeeCCCCCeEEEecCCCCeEEEEcCcccceeeE
Confidence 455677888886554433 22244444443111111111111234566788888754 4455568999999877666555
Q ss_pred EecCCccEEEEEEcCCCCEEEEeeC---CCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEec-CCCeEEEEeC
Q psy4393 107 LKGHSNYVFCCNFNPQSNLIVSGSF---DESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSS-YDGLCRIWDT 182 (247)
Q Consensus 107 ~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~v~d~ 182 (247)
..-.. .-..+.++|+++.++.+.. ++.+.+.|..+.+.+........+ ..++++|+|..++++. .++.+.++|.
T Consensus 112 ~~vG~-~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~vG~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~ 189 (381)
T COG3391 112 IPVGL-GPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATIPVGNTP-TGVAVDPDGNKVYVTNSDDNTVSVIDT 189 (381)
T ss_pred eeecc-CCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEEecCCCc-ceEEECCCCCeEEEEecCCCeEEEEeC
Confidence 44332 3456889999987777655 678999999988887776665556 7899999999666654 6789999997
Q ss_pred CCceeee-e---eccCCCCCeEEEEECCCCCEEEEEEcC---CeEEEEECCCcceE
Q psy4393 183 ASGQCLK-T---LIDDDNPPVSFVKFSPNGKYILAATLD---NTLKLWDSKVVTPA 231 (247)
Q Consensus 183 ~~~~~~~-~---~~~~~~~~v~~~~~s~~~~~l~~~~~d---g~i~vwd~~~~~~~ 231 (247)
......+ . ....... -..+.++|+|..++..... +.+...|.......
T Consensus 190 ~~~~v~~~~~~~~~~~~~~-P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~~v~ 244 (381)
T COG3391 190 SGNSVVRGSVGSLVGVGTG-PAGIAVDPDGNRVYVANDGSGSNNVLKIDTATGNVT 244 (381)
T ss_pred CCcceeccccccccccCCC-CceEEECCCCCEEEEEeccCCCceEEEEeCCCceEE
Confidence 7665442 1 0111112 2458899999977665543 58888888775544
No 350
>KOG4649|consensus
Probab=98.03 E-value=0.0029 Score=47.66 Aligned_cols=102 Identities=11% Similarity=0.066 Sum_probs=70.3
Q ss_pred CCEEEEEeCCCeEEEEecCCCeEEEEEeccc-CCeEEEEECCCCCEEEEEcCCCeEEEEECCCceEEEEEecCCccEEEE
Q psy4393 39 GEWLASSSADKLIKIWGAYDGKFEKTISGHK-LGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCC 117 (247)
Q Consensus 39 ~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~ 117 (247)
|++++.|+..|.+++.+..++...+.+.... ..+. ....+++..|..++.|+..+..|.++..++.+.+-..+.....
T Consensus 63 gdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~vk~~-a~~d~~~glIycgshd~~~yalD~~~~~cVykskcgG~~f~sP 141 (354)
T KOG4649|consen 63 GDFVVLGCYSGGLYFLCVKTGSQIWNFVILETVKVR-AQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSKCGGGTFVSP 141 (354)
T ss_pred CCEEEEEEccCcEEEEEecchhheeeeeehhhhccc-eEEcCCCceEEEecCCCcEEEecccccceEEecccCCceeccc
Confidence 4567788999999999998886666554322 2222 3467789999999999999999999988887776555544555
Q ss_pred EEcCCCCEEEEeeCCCCEEEEECC
Q psy4393 118 NFNPQSNLIVSGSFDESVRIWDVR 141 (247)
Q Consensus 118 ~~~~~~~~l~~~~~d~~i~v~d~~ 141 (247)
+.+|....++.+...|.+---..+
T Consensus 142 ~i~~g~~sly~a~t~G~vlavt~~ 165 (354)
T KOG4649|consen 142 VIAPGDGSLYAAITAGAVLAVTKN 165 (354)
T ss_pred eecCCCceEEEEeccceEEEEccC
Confidence 667733444444455555444433
No 351
>PRK13616 lipoprotein LpqB; Provisional
Probab=98.03 E-value=0.00091 Score=57.52 Aligned_cols=147 Identities=14% Similarity=0.136 Sum_probs=84.9
Q ss_pred CCeEEEEECCCCCEEEEEc------CCC--eEEEEECCCceEEEEEecCCccEEEEEEcCCCCEEEEeeCC---------
Q psy4393 70 LGISDVAWSSDSRLLVSGS------DDK--TLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD--------- 132 (247)
Q Consensus 70 ~~v~~~~~~~~~~~l~~~~------~d~--~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------- 132 (247)
..+.+.+++|+|+.++... .|. .+.+++.. +.. ..+.... ......|+|+|..+++....
T Consensus 350 ~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~g-g~~-~~lt~g~-~~t~PsWspDG~~lw~v~dg~~~~~v~~~ 426 (591)
T PRK13616 350 GNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLG-GVA-VQVLEGH-SLTRPSWSLDADAVWVVVDGNTVVRVIRD 426 (591)
T ss_pred cCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCC-Ccc-eeeecCC-CCCCceECCCCCceEEEecCcceEEEecc
Confidence 3577889999999887654 233 45555642 222 3332222 26677899998877766432
Q ss_pred ---CCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCCCeEEE---EeCCCcee-e---eeeccCCCCCeEEE
Q psy4393 133 ---ESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI---WDTASGQC-L---KTLIDDDNPPVSFV 202 (247)
Q Consensus 133 ---~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v---~d~~~~~~-~---~~~~~~~~~~v~~~ 202 (247)
+.+.+.++..+.... ...+.|..+.|+|||..++... +|++.+ -....++. + ..+.......+..+
T Consensus 427 ~~~gql~~~~vd~ge~~~---~~~g~Issl~wSpDG~RiA~i~-~g~v~Va~Vvr~~~G~~~l~~~~~l~~~l~~~~~~l 502 (591)
T PRK13616 427 PATGQLARTPVDASAVAS---RVPGPISELQLSRDGVRAAMII-GGKVYLAVVEQTEDGQYALTNPREVGPGLGDTAVSL 502 (591)
T ss_pred CCCceEEEEeccCchhhh---ccCCCcCeEEECCCCCEEEEEE-CCEEEEEEEEeCCCCceeecccEEeecccCCccccc
Confidence 223333443332211 2245799999999999887765 577776 44344431 1 11111222334678
Q ss_pred EECCCCCEEEEEEcCCeEEEEE
Q psy4393 203 KFSPNGKYILAATLDNTLKLWD 224 (247)
Q Consensus 203 ~~s~~~~~l~~~~~dg~i~vwd 224 (247)
.|..++.++ .+..++...+|.
T Consensus 503 ~W~~~~~L~-V~~~~~~~~v~~ 523 (591)
T PRK13616 503 DWRTGDSLV-VGRSDPEHPVWY 523 (591)
T ss_pred eEecCCEEE-EEecCCCCceEE
Confidence 999999855 555555455554
No 352
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=98.01 E-value=0.0024 Score=53.01 Aligned_cols=144 Identities=13% Similarity=0.197 Sum_probs=79.0
Q ss_pred cccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEE
Q psy4393 67 GHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCL 146 (247)
Q Consensus 67 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~ 146 (247)
........+.++|+|+.++++ .+|...+|......... .. .-....|.+ .+.+|+-..++.|.++.--.....
T Consensus 30 ~~~~~p~~ls~npngr~v~V~-g~geY~iyt~~~~r~k~-~G----~g~~~vw~~-~n~yAv~~~~~~I~I~kn~~~~~~ 102 (443)
T PF04053_consen 30 SCEIYPQSLSHNPNGRFVLVC-GDGEYEIYTALAWRNKA-FG----SGLSFVWSS-RNRYAVLESSSTIKIYKNFKNEVV 102 (443)
T ss_dssp E-SS--SEEEE-TTSSEEEEE-ETTEEEEEETTTTEEEE-EE----E-SEEEE-T-SSEEEEE-TTS-EEEEETTEE-TT
T ss_pred CCCcCCeeEEECCCCCEEEEE-cCCEEEEEEccCCcccc-cC----ceeEEEEec-CccEEEEECCCeEEEEEcCccccc
Confidence 344557889999999998884 57777788854433322 21 122456877 455666666888998732222222
Q ss_pred EeecCCCCCeEEEEECCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECC
Q psy4393 147 KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSK 226 (247)
Q Consensus 147 ~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~ 226 (247)
..++.. ..+..+-. |.+|+..+. +.|.+||..+++.+..+.. .+|..+.|+++|++++..+.+ .+.|++.+
T Consensus 103 k~i~~~-~~~~~If~---G~LL~~~~~-~~i~~yDw~~~~~i~~i~v---~~vk~V~Ws~~g~~val~t~~-~i~il~~~ 173 (443)
T PF04053_consen 103 KSIKLP-FSVEKIFG---GNLLGVKSS-DFICFYDWETGKLIRRIDV---SAVKYVIWSDDGELVALVTKD-SIYILKYN 173 (443)
T ss_dssp -----S-S-EEEEE----SSSEEEEET-TEEEEE-TTT--EEEEESS----E-EEEEE-TTSSEEEEE-S--SEEEEEE-
T ss_pred eEEcCC-cccceEEc---CcEEEEECC-CCEEEEEhhHcceeeEEec---CCCcEEEEECCCCEEEEEeCC-eEEEEEec
Confidence 233322 23444433 777777654 4899999999988877632 247889999999999998854 66666544
No 353
>KOG3621|consensus
Probab=97.93 E-value=9.3e-05 Score=62.34 Aligned_cols=108 Identities=15% Similarity=0.257 Sum_probs=83.4
Q ss_pred EECCCCCEEEEEcCCCeEEEEECCCceEEEEEec--CCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeE-----EEe
Q psy4393 76 AWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKG--HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC-----LKT 148 (247)
Q Consensus 76 ~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~-----~~~ 148 (247)
+++..+++++.|+..|.+++|+-..+... .++. ..+.+..+..+++..++|.|+..|.|.++-++.+.+ +..
T Consensus 40 c~dst~~~l~~GsS~G~lyl~~R~~~~~~-~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~~~~~~t~ 118 (726)
T KOG3621|consen 40 CVDATEEYLAMGSSAGSVYLYNRHTGEMR-KLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPRDLDYVTP 118 (726)
T ss_pred EeecCCceEEEecccceEEEEecCchhhh-cccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCCcceeecc
Confidence 45567889999999999999997665543 2332 445566778899999999999999999998875432 111
Q ss_pred e-cCCCCCeEEEEECCCCCEEEEecCCCeEEEEeCCC
Q psy4393 149 L-PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 184 (247)
Q Consensus 149 ~-~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~ 184 (247)
. +.|...|++++|++++..+++|...|+|....+.+
T Consensus 119 ~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s 155 (726)
T KOG3621|consen 119 CDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDS 155 (726)
T ss_pred ccccCCceEEEEEecccccEEeecCCCceEEEEEech
Confidence 1 34677899999999999999999999998876665
No 354
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=97.93 E-value=6.6e-05 Score=38.48 Aligned_cols=36 Identities=56% Similarity=0.872 Sum_probs=31.9
Q ss_pred EEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEe
Q psy4393 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWG 55 (247)
Q Consensus 20 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~ 55 (247)
...+..|...|.++.|.+.++.+++++.|+.+++|+
T Consensus 5 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 5 LKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred EEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 455567899999999999999999999999999995
No 355
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=97.92 E-value=0.0054 Score=48.98 Aligned_cols=172 Identities=13% Similarity=0.123 Sum_probs=95.5
Q ss_pred eEEEEecCCCeEEEEEeccc-CCeE---EEEECCC----CCEEEEEcC----------CCeEEEEECCCc----eEEEEE
Q psy4393 50 LIKIWGAYDGKFEKTISGHK-LGIS---DVAWSSD----SRLLVSGSD----------DKTLKIWELSSG----KCLKTL 107 (247)
Q Consensus 50 ~v~iw~~~~~~~~~~~~~~~-~~v~---~~~~~~~----~~~l~~~~~----------d~~i~v~d~~~~----~~~~~~ 107 (247)
.|++.|..+.+....+.-.. ..+. .+.+..+ ..+|+.|.. .|.+.++++... ..+..+
T Consensus 3 ~i~l~d~~~~~~~~~~~l~~~E~~~s~~~~~l~~~~~~~~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~i 82 (321)
T PF03178_consen 3 SIRLVDPTTFEVLDSFELEPNEHVTSLCSVKLKGDSTGKKEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKLI 82 (321)
T ss_dssp EEEEEETTTSSEEEEEEEETTEEEEEEEEEEETTS---SSEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEEE
T ss_pred EEEEEeCCCCeEEEEEECCCCceEEEEEEEEEcCccccccCEEEEEecccccccccccCcEEEEEEEEcccccceEEEEE
Confidence 56777776665544433211 1233 3344432 345665532 288999999874 122211
Q ss_pred --ecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCe-EEEeec-CCCCCeEEEEECCCCCEEEEecCCCeEEEE--e
Q psy4393 108 --KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK-CLKTLP-AHSDPVSAVHFNRDGSLIVSSSYDGLCRIW--D 181 (247)
Q Consensus 108 --~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~-~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~--d 181 (247)
....+.|.+++-- .+. ++.+ .+..|.+|++...+ ....-. .....+.++... +.++++|.....+.++ +
T Consensus 83 ~~~~~~g~V~ai~~~-~~~-lv~~-~g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~~--~~~I~vgD~~~sv~~~~~~ 157 (321)
T PF03178_consen 83 HSTEVKGPVTAICSF-NGR-LVVA-VGNKLYVYDLDNSKTLLKKAFYDSPFYITSLSVF--KNYILVGDAMKSVSLLRYD 157 (321)
T ss_dssp EEEEESS-EEEEEEE-TTE-EEEE-ETTEEEEEEEETTSSEEEEEEE-BSSSEEEEEEE--TTEEEEEESSSSEEEEEEE
T ss_pred EEEeecCcceEhhhh-CCE-EEEe-ecCEEEEEEccCcccchhhheecceEEEEEEecc--ccEEEEEEcccCEEEEEEE
Confidence 2235667776655 333 4433 34789999998776 333221 122356666554 5588888877777766 4
Q ss_pred CCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECC
Q psy4393 182 TASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSK 226 (247)
Q Consensus 182 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~ 226 (247)
....+....-.......+.++.|-++++.++++..+|.+.++...
T Consensus 158 ~~~~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~ 202 (321)
T PF03178_consen 158 EENNKLILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYN 202 (321)
T ss_dssp TTTE-EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-
T ss_pred ccCCEEEEEEecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEEC
Confidence 422222211112223346777777666799999999999999865
No 356
>KOG1008|consensus
Probab=97.88 E-value=3e-06 Score=70.30 Aligned_cols=162 Identities=22% Similarity=0.349 Sum_probs=104.0
Q ss_pred EEEecCCCCeEEEEECC-CCCEEEEEe----CCCeEEEEecCCC----eEEEEEec-ccCCeEEEEECCCCCEEEEEcCC
Q psy4393 21 FTLAGHTKAVSSVKFSP-NGEWLASSS----ADKLIKIWGAYDG----KFEKTISG-HKLGISDVAWSSDSRLLVSGSDD 90 (247)
Q Consensus 21 ~~~~~h~~~v~~~~~s~-~~~~l~~~~----~dg~v~iw~~~~~----~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d 90 (247)
...++|.+..++++|++ |.+.||+|- .|..+.|||+..+ +....+.+ ......+++|..+.+.+++|...
T Consensus 96 E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi~s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~s 175 (783)
T KOG1008|consen 96 EVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDINSLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTS 175 (783)
T ss_pred eecccccccccccccccccHHHHHhhhhhhcccCCccceecccccCCCccccccccccccCccccccccCcchhhccccc
Confidence 34557888999999998 566777763 3567999998754 12222332 34456688888888889999988
Q ss_pred CeEEEEECCCceEEEEEecCCccEEEEEEcC-CCCEEEEeeCCCCEEEEE-CCCCe-EEEeecC----CCCCeEEEEECC
Q psy4393 91 KTLKIWELSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWD-VRTGK-CLKTLPA----HSDPVSAVHFNR 163 (247)
Q Consensus 91 ~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~v~d-~~~~~-~~~~~~~----~~~~i~~~~~~~ 163 (247)
..++++|++..... ........+..+..+| .++++++- .||.+.+|| .+.-+ ++..+.. ....+..++|.|
T Consensus 176 r~~~ifdlRqs~~~-~~svnTk~vqG~tVdp~~~nY~cs~-~dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycP 253 (783)
T KOG1008|consen 176 RSVHIFDLRQSLDS-VSSVNTKYVQGITVDPFSPNYFCSN-SDGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCP 253 (783)
T ss_pred chhhhhhhhhhhhh-hhhhhhhhcccceecCCCCCceecc-ccCceeeccchhhhccHHHHHhhCCCCcccceeeEEecc
Confidence 89999998743211 1111223455566777 55666654 499999999 43322 2222211 123488899999
Q ss_pred CCC-EEEEecCC-CeEEEEeCCC
Q psy4393 164 DGS-LIVSSSYD-GLCRIWDTAS 184 (247)
Q Consensus 164 ~~~-~l~~~~~d-g~i~v~d~~~ 184 (247)
... ++++...| +.|+.+|+..
T Consensus 254 trtglla~l~RdS~tIrlydi~~ 276 (783)
T KOG1008|consen 254 TRTGLLAVLSRDSITIRLYDICV 276 (783)
T ss_pred CCcchhhhhccCcceEEEecccc
Confidence 644 45555544 6889998764
No 357
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=97.84 E-value=0.011 Score=48.34 Aligned_cols=207 Identities=15% Similarity=0.215 Sum_probs=115.5
Q ss_pred CeEEEEECCCCCEEEEEeCCCeEEEEecCCCeE-------------------------------------------EEEE
Q psy4393 29 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF-------------------------------------------EKTI 65 (247)
Q Consensus 29 ~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~-------------------------------------------~~~~ 65 (247)
.|+.+.|+++...|+.+...|.|.+|.....+. ...+
T Consensus 3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l~ 82 (395)
T PF08596_consen 3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTLL 82 (395)
T ss_dssp -EEEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEEE
T ss_pred eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhhe
Confidence 578899999888889999999998875321100 0111
Q ss_pred ecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceEEEEE--ec------CCccEEEEEEc-----CCC---CEEEEe
Q psy4393 66 SGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTL--KG------HSNYVFCCNFN-----PQS---NLIVSG 129 (247)
Q Consensus 66 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~--~~------~~~~v~~~~~~-----~~~---~~l~~~ 129 (247)
....++|++++.+ +-.+++.|.++|.+.+.|++....+..- .. ....+.++.|. .|+ -.++.|
T Consensus 83 ~~~~g~vtal~~S-~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~vG 161 (395)
T PF08596_consen 83 DAKQGPVTALKNS-DIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLVG 161 (395)
T ss_dssp ---S-SEEEEEE--BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEEE
T ss_pred eccCCcEeEEecC-CCcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEEE
Confidence 2235678888886 4558999999999999999876655432 11 22346666664 232 467888
Q ss_pred eCCCCEEEEECCC---CeE----EEeecCCCCCeEEEE-ECCC-C-------------------CEEEEecCCCeEEEEe
Q psy4393 130 SFDESVRIWDVRT---GKC----LKTLPAHSDPVSAVH-FNRD-G-------------------SLIVSSSYDGLCRIWD 181 (247)
Q Consensus 130 ~~d~~i~v~d~~~---~~~----~~~~~~~~~~i~~~~-~~~~-~-------------------~~l~~~~~dg~i~v~d 181 (247)
...|.+.+|.+.- +.- ......+.+++..+. ++.+ | ..+++...+..++++.
T Consensus 162 Tn~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g~vVvvSe~~irv~~ 241 (395)
T PF08596_consen 162 TNSGNVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQGLSKGISIPGYVVVVSESDIRVFK 241 (395)
T ss_dssp ETTSEEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT----EEEEEE-SSEEEEE-
T ss_pred eCCCCEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCcCcEEEEEcccceEEEe
Confidence 9999999997741 111 111123445554443 3211 0 1234444577899999
Q ss_pred CCCceeeeeeccCCCCCeEEEEE-----CCCCCEEEEEEcCCeEEEEECCCcceEEEEccC
Q psy4393 182 TASGQCLKTLIDDDNPPVSFVKF-----SPNGKYILAATLDNTLKLWDSKVVTPAIICSTP 237 (247)
Q Consensus 182 ~~~~~~~~~~~~~~~~~v~~~~~-----s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~ 237 (247)
..+.+...... ........+.+ ...+..|++-..+|.|++|.+-..+++.....+
T Consensus 242 ~~~~k~~~K~~-~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lkei~~~~l~ 301 (395)
T PF08596_consen 242 PPKSKGAHKSF-DDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLKEIKSVSLP 301 (395)
T ss_dssp TT---EEEEE--SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT--EEEEEE-S
T ss_pred CCCCcccceee-ccccccceEEEEeecccCCceEEEEEECCCcEEEEECCCchHhhcccCC
Confidence 88776655544 22122223334 235667888889999999999888877766654
No 358
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=97.80 E-value=0.00013 Score=37.29 Aligned_cols=38 Identities=45% Similarity=0.828 Sum_probs=32.6
Q ss_pred eEEEeecCCCCCeEEEEECCCCCEEEEecCCCeEEEEe
Q psy4393 144 KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181 (247)
Q Consensus 144 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d 181 (247)
+....+..|...+.++.|++++..+++++.|+.+++||
T Consensus 3 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 3 ELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred EEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 34556667788999999999999999999999999996
No 359
>KOG2395|consensus
Probab=97.77 E-value=0.0014 Score=53.99 Aligned_cols=144 Identities=25% Similarity=0.356 Sum_probs=97.2
Q ss_pred CCCCEEE-EEcCCCeEEEEECCCceEEEEEecCCccEEEEEEcCCCC-------EEEEeeCCCCEEEEECCCCeE--EEe
Q psy4393 79 SDSRLLV-SGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSN-------LIVSGSFDESVRIWDVRTGKC--LKT 148 (247)
Q Consensus 79 ~~~~~l~-~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~-------~l~~~~~d~~i~v~d~~~~~~--~~~ 148 (247)
.+.++|+ .+..-..++-.|++.|+.+...+.+.. |.-+.+.|+.. .-+.|-.+..|.-||.|-... +..
T Consensus 343 ~dsnlil~~~~~~~~l~klDIE~GKIVeEWk~~~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~ 421 (644)
T KOG2395|consen 343 ADSNLILMDGGEQDKLYKLDIERGKIVEEWKFEDD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAV 421 (644)
T ss_pred cccceEeeCCCCcCcceeeecccceeeeEeeccCC-cceeeccCCcchhcccccccEEeecCCceEEecccccCcceeee
Confidence 3445444 344445677789999999888887666 66667777542 234466778889999884322 222
Q ss_pred ecCCC----CCeEEEEECCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEE
Q psy4393 149 LPAHS----DPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224 (247)
Q Consensus 149 ~~~~~----~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd 224 (247)
.+.|. ....|.+-..+| ++++|+.+|.|++||- .+...++.+..-+.+|..+..+.||++|++.+ +..+.+-+
T Consensus 422 ~q~kqy~~k~nFsc~aTT~sG-~IvvgS~~GdIRLYdr-i~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc-~tyLlLi~ 498 (644)
T KOG2395|consen 422 VQSKQYSTKNNFSCFATTESG-YIVVGSLKGDIRLYDR-IGRRAKTALPGLGDAIKHVDVTADGKWILATC-KTYLLLID 498 (644)
T ss_pred eeccccccccccceeeecCCc-eEEEeecCCcEEeehh-hhhhhhhcccccCCceeeEEeeccCcEEEEec-ccEEEEEE
Confidence 22221 234555555555 6889999999999997 55555566666778899999999999988766 56777766
Q ss_pred CC
Q psy4393 225 SK 226 (247)
Q Consensus 225 ~~ 226 (247)
..
T Consensus 499 t~ 500 (644)
T KOG2395|consen 499 TL 500 (644)
T ss_pred Ee
Confidence 53
No 360
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=97.74 E-value=0.0028 Score=55.76 Aligned_cols=132 Identities=19% Similarity=0.250 Sum_probs=86.5
Q ss_pred CCCeEEEEecCCCeEEEEEecccCC-eEEEEECCC-------CCEEEEEcCCCeEEEEECCCce--EEE-EEe--cCCcc
Q psy4393 47 ADKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSD-------SRLLVSGSDDKTLKIWELSSGK--CLK-TLK--GHSNY 113 (247)
Q Consensus 47 ~dg~v~iw~~~~~~~~~~~~~~~~~-v~~~~~~~~-------~~~l~~~~~d~~i~v~d~~~~~--~~~-~~~--~~~~~ 113 (247)
....|+-.|++.|+.+..+..+... |..+ .|+ ....+.|-.+..+..||.+-.. .+. ..+ .....
T Consensus 502 ~~~~ly~mDLe~GKVV~eW~~~~~~~v~~~--~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~~k~Y~~~~~ 579 (794)
T PF08553_consen 502 NPNKLYKMDLERGKVVEEWKVHDDIPVVDI--APDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQSKQYSSKNN 579 (794)
T ss_pred CCCceEEEecCCCcEEEEeecCCCcceeEe--cccccccccCCCceEEEECCCceEEeccCCCCCceeeccccccccCCC
Confidence 4567888899999998888766543 5544 443 2234556667778889987532 221 011 12233
Q ss_pred EEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCCCeEEEEeC
Q psy4393 114 VFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 182 (247)
Q Consensus 114 v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~ 182 (247)
..|++-+.+ ..||.|+.+|.||+||--..+....+++-..||..+..+.||+++++.+ +..+.+++.
T Consensus 580 Fs~~aTt~~-G~iavgs~~G~IRLyd~~g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc-~tyLlLi~t 646 (794)
T PF08553_consen 580 FSCFATTED-GYIAVGSNKGDIRLYDRLGKRAKTALPGLGDPIIGIDVTADGKWILATC-KTYLLLIDT 646 (794)
T ss_pred ceEEEecCC-ceEEEEeCCCcEEeecccchhhhhcCCCCCCCeeEEEecCCCcEEEEee-cceEEEEEE
Confidence 556655555 4689999999999999433222334556578999999999999988766 445556654
No 361
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=97.73 E-value=0.015 Score=46.78 Aligned_cols=205 Identities=17% Similarity=0.175 Sum_probs=96.0
Q ss_pred EEECCCCCEEEE-EeCCC--eEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceEEEEEec
Q psy4393 33 VKFSPNGEWLAS-SSADK--LIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKG 109 (247)
Q Consensus 33 ~~~s~~~~~l~~-~~~dg--~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~ 109 (247)
=+|.++|++|+. +..+| .+...|+.+++..+...+.........++|+++.++-...+..+.-.|+++.+.......
T Consensus 41 ~~ft~dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g~~~~g~~~s~~~~~~~Yv~~~~~l~~vdL~T~e~~~vy~~ 120 (386)
T PF14583_consen 41 NCFTDDGRKLLFASDFDGNRNLYLLDLATGEITQLTDGPGDNTFGGFLSPDDRALYYVKNGRSLRRVDLDTLEERVVYEV 120 (386)
T ss_dssp --B-TTS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS-B-TTT-EE-TTSSEEEEEETTTEEEEEETTT--EEEEEE-
T ss_pred CCcCCCCCEEEEEeccCCCcceEEEEcccCEEEECccCCCCCccceEEecCCCeEEEEECCCeEEEEECCcCcEEEEEEC
Confidence 367788976654 44455 566667778776665554323233455788888877665667888889998776555554
Q ss_pred CCccEEEEEE--cCCCCEEEEeeC----------------------CCCEEEEECCCCeEEEeecCCCCCeEEEEECCCC
Q psy4393 110 HSNYVFCCNF--NPQSNLIVSGSF----------------------DESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDG 165 (247)
Q Consensus 110 ~~~~v~~~~~--~~~~~~l~~~~~----------------------d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~ 165 (247)
....+....| +.++..++..-. ...|.-.|+.+|+....+. ....+.-+.++|..
T Consensus 121 p~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~tG~~~~v~~-~~~wlgH~~fsP~d 199 (386)
T PF14583_consen 121 PDDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDLKTGERKVVFE-DTDWLGHVQFSPTD 199 (386)
T ss_dssp -TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEETTT--EEEEEE-ESS-EEEEEEETTE
T ss_pred CcccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEECCCCceeEEEe-cCccccCcccCCCC
Confidence 4444433333 455666543211 1135555777766543333 24456778899976
Q ss_pred CEEEEecCCC-----eEEEE--eCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEc-----CCeEEEEECCCcceEEE
Q psy4393 166 SLIVSSSYDG-----LCRIW--DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATL-----DNTLKLWDSKVVTPAII 233 (247)
Q Consensus 166 ~~l~~~~~dg-----~i~v~--d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-----dg~i~vwd~~~~~~~~~ 233 (247)
..+++=+.+| .-+|| +.................+..=-|.|||..|..-+. +..|.-+|.++......
T Consensus 200 p~li~fCHEGpw~~Vd~RiW~i~~dg~~~~~v~~~~~~e~~gHEfw~~DG~~i~y~~~~~~~~~~~i~~~d~~t~~~~~~ 279 (386)
T PF14583_consen 200 PTLIMFCHEGPWDLVDQRIWTINTDGSNVKKVHRRMEGESVGHEFWVPDGSTIWYDSYTPGGQDFWIAGYDPDTGERRRL 279 (386)
T ss_dssp EEEEEEEE-S-TTTSS-SEEEEETTS---EESS---TTEEEEEEEE-TTSS-EEEEEEETTT--EEEEEE-TTT--EEEE
T ss_pred CCEEEEeccCCcceeceEEEEEEcCCCcceeeecCCCCcccccccccCCCCEEEEEeecCCCCceEEEeeCCCCCCceEE
Confidence 6555443333 12455 444333222211122223444568999987765332 33667777777665544
Q ss_pred EccCC
Q psy4393 234 CSTPL 238 (247)
Q Consensus 234 ~~~~~ 238 (247)
.+-|.
T Consensus 280 ~~~p~ 284 (386)
T PF14583_consen 280 MEMPW 284 (386)
T ss_dssp EEE-S
T ss_pred EeCCc
Confidence 44443
No 362
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=97.73 E-value=0.014 Score=46.12 Aligned_cols=182 Identities=13% Similarity=0.176 Sum_probs=104.4
Q ss_pred CeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEec-----ccCCeEEEEECCCCCEEEEEcC-----------CCe
Q psy4393 29 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG-----HKLGISDVAWSSDSRLLVSGSD-----------DKT 92 (247)
Q Consensus 29 ~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~-----------d~~ 92 (247)
.+.++..-..+..|+++ +..+.+++.+++.....+.. .....++....|+|.+.++... -|.
T Consensus 67 ~~~~~~~~d~~g~Lv~~--~~g~~~~~~~~~~~~t~~~~~~~~~~~~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~ 144 (307)
T COG3386 67 GFSSGALIDAGGRLIAC--EHGVRLLDPDTGGKITLLAEPEDGLPLNRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGS 144 (307)
T ss_pred CcccceeecCCCeEEEE--ccccEEEeccCCceeEEeccccCCCCcCCCCceeEcCCCCEEEeCCCccccCccccCCcce
Confidence 34444433334445444 23355666655544222221 1234567888999987776544 133
Q ss_pred EEEEECCCceEEEEEecCCccEEEEEEcCCCCEEEEeeC-CCCEEEEECCC--C----eE-EEeecCCCCCeEEEEECCC
Q psy4393 93 LKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF-DESVRIWDVRT--G----KC-LKTLPAHSDPVSAVHFNRD 164 (247)
Q Consensus 93 i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~v~d~~~--~----~~-~~~~~~~~~~i~~~~~~~~ 164 (247)
++.+|. .+...+.+..+-..-+.++|+|+++.++.... .+.|+-|++.. + +. ...+....+..-.++...+
T Consensus 145 lyr~~p-~g~~~~l~~~~~~~~NGla~SpDg~tly~aDT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDad 223 (307)
T COG3386 145 LYRVDP-DGGVVRLLDDDLTIPNGLAFSPDGKTLYVADTPANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDAD 223 (307)
T ss_pred EEEEcC-CCCEEEeecCcEEecCceEECCCCCEEEEEeCCCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCC
Confidence 444443 45555555544445577999999987777654 47788887652 1 11 1122233445556788888
Q ss_pred CCEEEEecCCC-eEEEEeCCCceeeeeeccCCCCCeEEEEEC-CCCCEEEEEE
Q psy4393 165 GSLIVSSSYDG-LCRIWDTASGQCLKTLIDDDNPPVSFVKFS-PNGKYILAAT 215 (247)
Q Consensus 165 ~~~l~~~~~dg-~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s-~~~~~l~~~~ 215 (247)
|.+.+++..+| .|..|+.. ++.+..+.... ..+++++|- |+.+.|+..+
T Consensus 224 G~lw~~a~~~g~~v~~~~pd-G~l~~~i~lP~-~~~t~~~FgG~~~~~L~iTs 274 (307)
T COG3386 224 GNLWVAAVWGGGRVVRFNPD-GKLLGEIKLPV-KRPTNPAFGGPDLNTLYITS 274 (307)
T ss_pred CCEEEecccCCceEEEECCC-CcEEEEEECCC-CCCccceEeCCCcCEEEEEe
Confidence 88876555554 89999988 77666665443 344566664 5556665544
No 363
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=97.70 E-value=0.021 Score=47.25 Aligned_cols=172 Identities=10% Similarity=0.126 Sum_probs=84.6
Q ss_pred CCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEe--cccCCeEEE-----EECCCCCEEEEEcCCCeEEEEECCC
Q psy4393 28 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS--GHKLGISDV-----AWSSDSRLLVSGSDDKTLKIWELSS 100 (247)
Q Consensus 28 ~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~--~~~~~v~~~-----~~~~~~~~l~~~~~d~~i~v~d~~~ 100 (247)
+.|.++.|+.+.++ +.-..||.+++||..... ...+. .....|... .+..+| ++.-..++.+.+.+--.
T Consensus 81 ~~iv~~~wt~~e~L-vvV~~dG~v~vy~~~G~~-~fsl~~~i~~~~v~e~~i~~~~~~~~G--ivvLt~~~~~~~v~n~~ 156 (410)
T PF04841_consen 81 GRIVGMGWTDDEEL-VVVQSDGTVRVYDLFGEF-QFSLGEEIEEEKVLECRIFAIWFYKNG--IVVLTGNNRFYVVNNID 156 (410)
T ss_pred CCEEEEEECCCCeE-EEEEcCCEEEEEeCCCce-eechhhhccccCcccccccccccCCCC--EEEECCCCeEEEEeCcc
Confidence 78999999886554 455789999999986433 11111 111122222 233344 33333444444433222
Q ss_pred ce-EEEEEecCCccEE----------EEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEE
Q psy4393 101 GK-CLKTLKGHSNYVF----------CCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIV 169 (247)
Q Consensus 101 ~~-~~~~~~~~~~~v~----------~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 169 (247)
.. ..+.+........ ...++.+....+....++.+.+.+-.... .+. ..+++..|++||+++++|
T Consensus 157 ~~~~~~~~~~~p~~~~~~~~~~~~~~i~~l~~~~~~~i~~~~g~~i~~i~~~~~~---~i~-~~~~i~~iavSpng~~iA 232 (410)
T PF04841_consen 157 EPVKLRRLPEIPGLWTKFHWWPSWTVIPLLSSDRVVEILLANGETIYIIDENSFK---QID-SDGPIIKIAVSPNGKFIA 232 (410)
T ss_pred ccchhhccccCCCcccccccccccccceEeecCcceEEEEecCCEEEEEEccccc---ccc-CCCCeEEEEECCCCCEEE
Confidence 11 1111110000000 01233333444444444455534322211 111 246899999999999999
Q ss_pred EecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCC
Q psy4393 170 SSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPN 207 (247)
Q Consensus 170 ~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~ 207 (247)
.-..+|.+.+...+-.+....+..........+.|.-+
T Consensus 233 l~t~~g~l~v~ssDf~~~~~e~~~~~~~~p~~~~WCG~ 270 (410)
T PF04841_consen 233 LFTDSGNLWVVSSDFSEKLCEFDTDSKSPPKQMAWCGN 270 (410)
T ss_pred EEECCCCEEEEECcccceeEEeecCcCCCCcEEEEECC
Confidence 98889998888765444443332222222334455443
No 364
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=97.67 E-value=0.022 Score=46.70 Aligned_cols=209 Identities=13% Similarity=0.138 Sum_probs=107.9
Q ss_pred ceEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEe--c------ccCCeEEEEECC-----CC--
Q psy4393 17 YVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS--G------HKLGISDVAWSS-----DS-- 81 (247)
Q Consensus 17 ~~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~--~------~~~~v~~~~~~~-----~~-- 81 (247)
+....-+....++|++++.| |=-++|.|.++|.+.|.|++.......-. . ....++++.|.. |+
T Consensus 76 f~P~~l~~~~~g~vtal~~S-~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~yS 154 (395)
T PF08596_consen 76 FLPLTLLDAKQGPVTALKNS-DIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYS 154 (395)
T ss_dssp EEEEEEE---S-SEEEEEE--BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSE
T ss_pred cCchhheeccCCcEeEEecC-CCcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCccc
Confidence 44444455568999999997 45578999999999999997776554422 1 123467777752 33
Q ss_pred -CEEEEEcCCCeEEEEECCC---ceE----EEEEecCCccEEEEE-EcCC-C-------------------CEEEEeeCC
Q psy4393 82 -RLLVSGSDDKTLKIWELSS---GKC----LKTLKGHSNYVFCCN-FNPQ-S-------------------NLIVSGSFD 132 (247)
Q Consensus 82 -~~l~~~~~d~~i~v~d~~~---~~~----~~~~~~~~~~v~~~~-~~~~-~-------------------~~l~~~~~d 132 (247)
-.+++|...|.+.+|.+.- +.. ......+.+.+..+. ++.+ | .-++....+
T Consensus 155 Si~L~vGTn~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g~vVvvSe 234 (395)
T PF08596_consen 155 SICLLVGTNSGNVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQGLSKGISIPGYVVVVSE 234 (395)
T ss_dssp EEEEEEEETTSEEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT----EEEEEE-S
T ss_pred ceEEEEEeCCCCEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCcCcEEEEEcc
Confidence 3578888999999997641 211 111223444444333 3211 1 123444456
Q ss_pred CCEEEEECCCCeEEEeecCCCCCeEEEEEC-----CCCCEEEEecCCCeEEEEeCCCceeeeeeccCCC---CCeEEEEE
Q psy4393 133 ESVRIWDVRTGKCLKTLPAHSDPVSAVHFN-----RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN---PPVSFVKF 204 (247)
Q Consensus 133 ~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~-----~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~---~~v~~~~~ 204 (247)
..++++.+.+.+..............+.+- ..+..|++-..+|.+++|.+-.-+.+........ ..+....+
T Consensus 235 ~~irv~~~~~~k~~~K~~~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lkei~~~~l~~~~d~~~~~~ssi 314 (395)
T PF08596_consen 235 SDIRVFKPPKSKGAHKSFDDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLKEIKSVSLPPPLDSRRLSSSSI 314 (395)
T ss_dssp SEEEEE-TT---EEEEE-SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT--EEEEEE-SS---HHHHTT-EE
T ss_pred cceEEEeCCCCcccceeeccccccceEEEEeecccCCceEEEEEECCCcEEEEECCCchHhhcccCCCccccccccccEE
Confidence 789999988776544433221223333442 2456677778899999999988776655433211 11233567
Q ss_pred CCCCCEEEEEEcC--CeEEEEECC
Q psy4393 205 SPNGKYILAATLD--NTLKLWDSK 226 (247)
Q Consensus 205 s~~~~~l~~~~~d--g~i~vwd~~ 226 (247)
+++|+.++-.+.. ..+.+|...
T Consensus 315 s~~Gdi~~~~gpsE~~l~sv~~~~ 338 (395)
T PF08596_consen 315 SRNGDIFYWTGPSEIQLFSVWGEG 338 (395)
T ss_dssp -TTS-EEEE-SSSEEEEEEEES--
T ss_pred CCCCCEEEEeCcccEEEEEEEccC
Confidence 8889877766543 245556443
No 365
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=97.66 E-value=0.0058 Score=39.96 Aligned_cols=100 Identities=13% Similarity=0.226 Sum_probs=65.2
Q ss_pred eEEEEECC---CC-CEEEEEcCCCeEEEEECCCceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEE
Q psy4393 72 ISDVAWSS---DS-RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLK 147 (247)
Q Consensus 72 v~~~~~~~---~~-~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~ 147 (247)
|+++++.. +| +.|++|+.|..|++|+-. ..+..+... +.+..+.-... ..++.+..+|+|-+|+-. ..+.
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~--e~~~Ei~e~-~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~~--~RlW 75 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGD--EIVAEITET-DKVTSLCSLGG-GRFAYALANGTVGVYDRS--QRLW 75 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEEEeCC--cEEEEEecc-cceEEEEEcCC-CEEEEEecCCEEEEEeCc--ceee
Confidence 45555543 33 468999999999999854 455566544 44556555554 679999999999999853 3345
Q ss_pred eecCCCCCeEEEE-ECCCC---CEEEEecCCCeEE
Q psy4393 148 TLPAHSDPVSAVH-FNRDG---SLIVSSSYDGLCR 178 (247)
Q Consensus 148 ~~~~~~~~i~~~~-~~~~~---~~l~~~~~dg~i~ 178 (247)
..+.... +.+++ ++.++ .-|++|-.+|.|-
T Consensus 76 RiKSK~~-~~~~~~~D~~gdG~~eLI~GwsnGkve 109 (111)
T PF14783_consen 76 RIKSKNQ-VTSMAFYDINGDGVPELIVGWSNGKVE 109 (111)
T ss_pred eeccCCC-eEEEEEEcCCCCCceEEEEEecCCeEE
Confidence 5554444 44444 33333 2678888888764
No 366
>PHA02713 hypothetical protein; Provisional
Probab=97.66 E-value=0.0038 Score=53.71 Aligned_cols=144 Identities=9% Similarity=0.091 Sum_probs=74.1
Q ss_pred CCCEEEEEcCCC-----eEEEEECCCceEEE--EEecCCccEEEEEEcCCCCEEEEeeCCC-------------------
Q psy4393 80 DSRLLVSGSDDK-----TLKIWELSSGKCLK--TLKGHSNYVFCCNFNPQSNLIVSGSFDE------------------- 133 (247)
Q Consensus 80 ~~~~l~~~~~d~-----~i~v~d~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~------------------- 133 (247)
+|+..+.|+.++ .+..||..+.+... .+.........+ .-++.+.+.|+.++
T Consensus 351 ~g~IYviGG~~~~~~~~sve~Ydp~~~~W~~~~~mp~~r~~~~~~--~~~g~IYviGG~~~~~~~~~~~~~~~~~~~~~~ 428 (557)
T PHA02713 351 DDTIYAIGGQNGTNVERTIECYTMGDDKWKMLPDMPIALSSYGMC--VLDQYIYIIGGRTEHIDYTSVHHMNSIDMEEDT 428 (557)
T ss_pred CCEEEEECCcCCCCCCceEEEEECCCCeEEECCCCCcccccccEE--EECCEEEEEeCCCcccccccccccccccccccc
Confidence 566667777653 47889987754322 111111111112 22466777776542
Q ss_pred ----CEEEEECCCCeE--EEeecCCCCCeEEEEECCCCCEEEEecCCC------eEEEEeCCC-ceeeeeeccCC-CCCe
Q psy4393 134 ----SVRIWDVRTGKC--LKTLPAHSDPVSAVHFNRDGSLIVSSSYDG------LCRIWDTAS-GQCLKTLIDDD-NPPV 199 (247)
Q Consensus 134 ----~i~v~d~~~~~~--~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg------~i~v~d~~~-~~~~~~~~~~~-~~~v 199 (247)
.+..||..+.+- +..+....... +++ .-++++.+.|+.++ .+..||..+ .+....-.... ....
T Consensus 429 ~~~~~ve~YDP~td~W~~v~~m~~~r~~~-~~~-~~~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r~~~ 506 (557)
T PHA02713 429 HSSNKVIRYDTVNNIWETLPNFWTGTIRP-GVV-SHKDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRLSAL 506 (557)
T ss_pred cccceEEEECCCCCeEeecCCCCcccccC-cEE-EECCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCcccccc
Confidence 366788776542 12221111111 122 22566677777542 467899887 44332111111 1111
Q ss_pred EEEEECCCCCEEEEEEcCC--eEEEEECCCcc
Q psy4393 200 SFVKFSPNGKYILAATLDN--TLKLWDSKVVT 229 (247)
Q Consensus 200 ~~~~~s~~~~~l~~~~~dg--~i~vwd~~~~~ 229 (247)
..+ .-+|+..++|+.+| .+..||..+.+
T Consensus 507 ~~~--~~~~~iyv~Gg~~~~~~~e~yd~~~~~ 536 (557)
T PHA02713 507 HTI--LHDNTIMMLHCYESYMLQDTFNVYTYE 536 (557)
T ss_pred eeE--EECCEEEEEeeecceeehhhcCccccc
Confidence 222 23678888898888 78888887654
No 367
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=97.64 E-value=0.021 Score=45.64 Aligned_cols=180 Identities=19% Similarity=0.204 Sum_probs=101.1
Q ss_pred CCEEEEEeC----------CCeEEEEecCCC-----eEEEE-EecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCce
Q psy4393 39 GEWLASSSA----------DKLIKIWGAYDG-----KFEKT-ISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGK 102 (247)
Q Consensus 39 ~~~l~~~~~----------dg~v~iw~~~~~-----~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~ 102 (247)
.++++.|+. .|.+.++++... +.... -....++|.+++-. .+. ++++. ++.+.+|++...+
T Consensus 42 ~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~i~~~~~~g~V~ai~~~-~~~-lv~~~-g~~l~v~~l~~~~ 118 (321)
T PF03178_consen 42 KEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKLIHSTEVKGPVTAICSF-NGR-LVVAV-GNKLYVYDLDNSK 118 (321)
T ss_dssp SEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEEEEEEEESS-EEEEEEE-TTE-EEEEE-TTEEEEEEEETTS
T ss_pred cCEEEEEecccccccccccCcEEEEEEEEcccccceEEEEEEEEeecCcceEhhhh-CCE-EEEee-cCEEEEEEccCcc
Confidence 457776643 288999998773 22211 12346678887655 344 44443 4789999998776
Q ss_pred -EEEEEec-CCccEEEEEEcCCCCEEEEeeCCCCEEEEECCC-CeEEEeec--CCCCCeEEEEECCCCCEEEEecCCCeE
Q psy4393 103 -CLKTLKG-HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT-GKCLKTLP--AHSDPVSAVHFNRDGSLIVSSSYDGLC 177 (247)
Q Consensus 103 -~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~-~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~dg~i 177 (247)
....-.. ....+.++... +++++.|.....+.++..+. +..+..+. .....++++.+-++++.++++..+|.+
T Consensus 119 ~l~~~~~~~~~~~i~sl~~~--~~~I~vgD~~~sv~~~~~~~~~~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl 196 (321)
T PF03178_consen 119 TLLKKAFYDSPFYITSLSVF--KNYILVGDAMKSVSLLRYDEENNKLILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNL 196 (321)
T ss_dssp SEEEEEEE-BSSSEEEEEEE--TTEEEEEESSSSEEEEEEETTTE-EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEE
T ss_pred cchhhheecceEEEEEEecc--ccEEEEEEcccCEEEEEEEccCCEEEEEEecCCCccEEEEEEecCCcEEEEEcCCCeE
Confidence 3332221 22244444443 66999999888888875443 22232222 224457788887666788999999999
Q ss_pred EEEeCCC-------ce-eee-eeccCCCCCeEEE---EECC--CC------CEEEEEEcCCeEEEE
Q psy4393 178 RIWDTAS-------GQ-CLK-TLIDDDNPPVSFV---KFSP--NG------KYILAATLDNTLKLW 223 (247)
Q Consensus 178 ~v~d~~~-------~~-~~~-~~~~~~~~~v~~~---~~s~--~~------~~l~~~~~dg~i~vw 223 (247)
.++.... +. .+. ....+-+..++.+ .+.| .+ ..++.++.+|.|-+.
T Consensus 197 ~~l~~~~~~~~~~~~~~~L~~~~~f~lg~~v~~~~~~~l~~~~~~~~~~~~~~i~~~T~~G~Ig~l 262 (321)
T PF03178_consen 197 FVLRYNPEIPNSRDGDPKLERISSFHLGDIVNSFRRGSLIPRSGSSESPNRPQILYGTVDGSIGVL 262 (321)
T ss_dssp EEEEE-SS-SSTTTTTTBEEEEEEEE-SS-EEEEEE--SS--SSSS-TTEEEEEEEEETTS-EEEE
T ss_pred EEEEECCCCcccccccccceeEEEEECCCccceEEEEEeeecCCCCcccccceEEEEecCCEEEEE
Confidence 8886542 11 111 1111223456655 4445 12 248888899988754
No 368
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.64 E-value=0.017 Score=44.48 Aligned_cols=161 Identities=12% Similarity=0.159 Sum_probs=98.6
Q ss_pred EecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceEEEEEecC-CccEEEEEEcCCCCEEEEeeCCCCEEEEECCCC
Q psy4393 65 ISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGH-SNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 143 (247)
Q Consensus 65 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~ 143 (247)
+.+....+.++.|+|+.+.|++......-.++=...|+.++.+.-. -.....+.+-.++++.++--.++.+.++.+...
T Consensus 81 i~g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~fvi~dER~~~l~~~~vd~~ 160 (316)
T COG3204 81 ILGETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQFVIVDERDRALYLFTVDAD 160 (316)
T ss_pred cccccccccceeeCCCcceEEEecCCCceEEEEecCCceEEEecccccCChhHeEEecCCEEEEEehhcceEEEEEEcCC
Confidence 4455566999999999999988877776666666678877765421 122345677777777777777888888877654
Q ss_pred eEEEe-----ec----CC-CCCeEEEEECCCCCEEEEecCCCeEEEEeCCCce-ee-eeeccCC-------CCCeEEEEE
Q psy4393 144 KCLKT-----LP----AH-SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ-CL-KTLIDDD-------NPPVSFVKF 204 (247)
Q Consensus 144 ~~~~~-----~~----~~-~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~-~~-~~~~~~~-------~~~v~~~~~ 204 (247)
..... ++ .+ ......++|+|....|..+-+..=+.+|...... .+ ....... -..+..+.|
T Consensus 161 t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~~~~~l~~~~~~~~~~~~~~f~~DvSgl~~ 240 (316)
T COG3204 161 TTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQSPSSLSVHASLDPTADRDLFVLDVSGLEF 240 (316)
T ss_pred ccEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEecCCcccccccccCcccccceEeecccccee
Confidence 32211 11 11 3456789999988888777766656666443221 00 0000000 123456777
Q ss_pred CCC-CCEEEEEEcCCeEEEEEC
Q psy4393 205 SPN-GKYILAATLDNTLKLWDS 225 (247)
Q Consensus 205 s~~-~~~l~~~~~dg~i~vwd~ 225 (247)
++. +.+|+.+.+++.+.-.|.
T Consensus 241 ~~~~~~LLVLS~ESr~l~Evd~ 262 (316)
T COG3204 241 NAITNSLLVLSDESRRLLEVDL 262 (316)
T ss_pred cCCCCcEEEEecCCceEEEEec
Confidence 764 455566666777666664
No 369
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=97.62 E-value=0.025 Score=46.15 Aligned_cols=197 Identities=15% Similarity=0.263 Sum_probs=95.4
Q ss_pred CCCEEEEEe-CCCeEEEEecCC----CeEEEEEec---c-c---CCeEEEEECCCCCEEEEEcC------CCeEEEEECC
Q psy4393 38 NGEWLASSS-ADKLIKIWGAYD----GKFEKTISG---H-K---LGISDVAWSSDSRLLVSGSD------DKTLKIWELS 99 (247)
Q Consensus 38 ~~~~l~~~~-~dg~v~iw~~~~----~~~~~~~~~---~-~---~~v~~~~~~~~~~~l~~~~~------d~~i~v~d~~ 99 (247)
+.++|+..+ ..+.|.|.|..+ .+..+.+.. + . ..-....--|+|+.++++-. -|.+.++|-+
T Consensus 86 ~Rr~Li~PgL~SsrIyviD~~~dPr~P~l~KvIe~~ev~~k~g~s~PHT~Hclp~G~imIS~lGd~~G~g~Ggf~llD~~ 165 (461)
T PF05694_consen 86 ERRYLILPGLRSSRIYVIDTKTDPRKPRLHKVIEPEEVFEKTGLSRPHTVHCLPDGRIMISALGDADGNGPGGFVLLDGE 165 (461)
T ss_dssp -S-EEEEEBTTT--EEEEE--S-TTS-EEEEEE-HHHHHHHH-EEEEEEEEE-SS--EEEEEEEETTS-S--EEEEE-TT
T ss_pred cCCcEEeeeeccCcEEEEECCCCCCCCceEeeeCHHHHHhhcCCCCCceeeecCCccEEEEeccCCCCCCCCcEEEEcCc
Confidence 345666655 778999999862 334444442 1 1 12233444578888877532 2467788887
Q ss_pred CceEEEEEecC---CccEEEEEEcCCCCEEEEeeC--------------------CCCEEEEECCCCeEEEeecCCCC--
Q psy4393 100 SGKCLKTLKGH---SNYVFCCNFNPQSNLIVSGSF--------------------DESVRIWDVRTGKCLKTLPAHSD-- 154 (247)
Q Consensus 100 ~~~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~--------------------d~~i~v~d~~~~~~~~~~~~~~~-- 154 (247)
+.+........ ...-....|.|..+.+++... ..++++||+...+.++.+.....
T Consensus 166 tf~v~g~We~~~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r~~~Q~idLg~~g~ 245 (461)
T PF05694_consen 166 TFEVKGRWEKDRGPQPFGYDFWYQPRHNVMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTRKLLQTIDLGEEGQ 245 (461)
T ss_dssp T--EEEE--SB-TT------EEEETTTTEEEE-B---HHHHTT---TTTHHHH-S--EEEEEETTTTEEEEEEES-TTEE
T ss_pred cccccceeccCCCCCCCCCCeEEcCCCCEEEEeccCChhhcccCCChhHhhcccccCeEEEEECCCCcEeeEEecCCCCC
Confidence 76655544332 223355677888888888654 34699999999999998876543
Q ss_pred CeEEEEEC--CCCCE-EEEecCCCeEEEE-eCCCceeee----eecc----C----C--------CCCeEEEEECCCCCE
Q psy4393 155 PVSAVHFN--RDGSL-IVSSSYDGLCRIW-DTASGQCLK----TLID----D----D--------NPPVSFVKFSPNGKY 210 (247)
Q Consensus 155 ~i~~~~~~--~~~~~-l~~~~~dg~i~v~-d~~~~~~~~----~~~~----~----~--------~~~v~~~~~s~~~~~ 210 (247)
....+.|. |+..+ ++.+...+.|..| ....++... .+.. . . .+-++.|..|.|.++
T Consensus 246 ~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~lp~ml~~~~~~P~LitDI~iSlDDrf 325 (461)
T PF05694_consen 246 MPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWILPEMLKPFGAVPPLITDILISLDDRF 325 (461)
T ss_dssp EEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--SS---GGGGGG-EE------EEE-TTS-E
T ss_pred ceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCcccccccccccccCCCceEeEEEccCCCE
Confidence 23456664 44443 3333344455444 323333211 1100 0 0 234688999999999
Q ss_pred EEEEE-cCCeEEEEECCCc-ceEEEE
Q psy4393 211 ILAAT-LDNTLKLWDSKVV-TPAIIC 234 (247)
Q Consensus 211 l~~~~-~dg~i~vwd~~~~-~~~~~~ 234 (247)
|+.+. .+|.|+.||+.+. +|.++-
T Consensus 326 LYvs~W~~GdvrqYDISDP~~Pkl~g 351 (461)
T PF05694_consen 326 LYVSNWLHGDVRQYDISDPFNPKLVG 351 (461)
T ss_dssp EEEEETTTTEEEEEE-SSTTS-EEEE
T ss_pred EEEEcccCCcEEEEecCCCCCCcEEe
Confidence 99887 6899999999874 566653
No 370
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=97.61 E-value=0.044 Score=48.79 Aligned_cols=195 Identities=16% Similarity=0.201 Sum_probs=116.5
Q ss_pred CCEEEEEeCCCeEEEEecCCCeEEEEEecccC--------CeEEEEEC----------------CCCCEEEEEcCCCeEE
Q psy4393 39 GEWLASSSADKLIKIWGAYDGKFEKTISGHKL--------GISDVAWS----------------SDSRLLVSGSDDKTLK 94 (247)
Q Consensus 39 ~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~--------~v~~~~~~----------------~~~~~l~~~~~d~~i~ 94 (247)
+..|+.++.++.|.-.|..+++.+..+..... .+..+++. ..+.+++.++.|+.+.
T Consensus 194 gg~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg~Li 273 (764)
T TIGR03074 194 GDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSDARLI 273 (764)
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEecCCCeEE
Confidence 55677778888998899988888777643211 01222221 1244788888899999
Q ss_pred EEECCCceEEEEEecCCccEE-------------EEEEcC--CCCEEEEeeC----------CCCEEEEECCCCeEEEee
Q psy4393 95 IWELSSGKCLKTLKGHSNYVF-------------CCNFNP--QSNLIVSGSF----------DESVRIWDVRTGKCLKTL 149 (247)
Q Consensus 95 v~d~~~~~~~~~~~~~~~~v~-------------~~~~~~--~~~~l~~~~~----------d~~i~v~d~~~~~~~~~~ 149 (247)
-.|.++|+....+... +.+. ...-.| .+..++.|+. +|.|+-+|.++|+.+..+
T Consensus 274 ALDA~TGk~~W~fg~~-G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~A~Da~TGkl~W~~ 352 (764)
T TIGR03074 274 ALDADTGKLCEDFGNN-GTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIRAFDVNTGALVWAW 352 (764)
T ss_pred EEECCCCCEEEEecCC-CceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEEEEEECCCCcEeeEE
Confidence 9999999877655321 1110 011112 1345555542 578999999999987665
Q ss_pred cCC---------C---------CCeEEEEECCCCCEEEEec------------------CCCeEEEEeCCCceeeeeecc
Q psy4393 150 PAH---------S---------DPVSAVHFNRDGSLIVSSS------------------YDGLCRIWDTASGQCLKTLID 193 (247)
Q Consensus 150 ~~~---------~---------~~i~~~~~~~~~~~l~~~~------------------~dg~i~v~d~~~~~~~~~~~~ 193 (247)
... . ..-..+++++...+++.+. ..+.+.-.|+++++..=.+..
T Consensus 353 ~~g~p~~~~~~~~g~~~~~gg~n~W~~~s~D~~~glvy~ptGn~~pd~~g~~r~~~~n~y~~slvALD~~TGk~~W~~Q~ 432 (764)
T TIGR03074 353 DPGNPDPTAPPAPGETYTRNTPNSWSVASYDEKLGLVYLPMGNQTPDQWGGDRTPADEKYSSSLVALDATTGKERWVFQT 432 (764)
T ss_pred ecCCCCcccCCCCCCEeccCCCCccCceEEcCCCCeEEEeCCCccccccCCccccCcccccceEEEEeCCCCceEEEecc
Confidence 321 0 0112345555554444322 124566778888876533322
Q ss_pred -CC-------CCCeEEEEECC-CCC---EEEEEEcCCeEEEEECCCcceEEEE
Q psy4393 194 -DD-------NPPVSFVKFSP-NGK---YILAATLDNTLKLWDSKVVTPAIIC 234 (247)
Q Consensus 194 -~~-------~~~v~~~~~s~-~~~---~l~~~~~dg~i~vwd~~~~~~~~~~ 234 (247)
++ ..+-..+.+.. +|+ .++.++.+|.+.++|.++++++...
T Consensus 433 ~~hD~WD~D~~~~p~L~d~~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~l~~~ 485 (764)
T TIGR03074 433 VHHDLWDMDVPAQPSLVDLPDADGTTVPALVAPTKQGQIYVLDRRTGEPIVPV 485 (764)
T ss_pred cCCccccccccCCceEEeeecCCCcEeeEEEEECCCCEEEEEECCCCCEEeec
Confidence 11 01112233333 563 7889999999999999999877653
No 371
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=97.59 E-value=0.023 Score=44.89 Aligned_cols=201 Identities=13% Similarity=0.090 Sum_probs=113.7
Q ss_pred EEEECCCCCEEEEE-eCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceEEEEEec-
Q psy4393 32 SVKFSPNGEWLASS-SADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKG- 109 (247)
Q Consensus 32 ~~~~s~~~~~l~~~-~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~- 109 (247)
+..|.++...|+-+ -..+.|.-|+..+++.. .+. ....+.++.....+..|+++.. -+.+++.+++.....+..
T Consensus 29 gP~w~~~~~~L~w~DI~~~~i~r~~~~~g~~~-~~~-~p~~~~~~~~~d~~g~Lv~~~~--g~~~~~~~~~~~~t~~~~~ 104 (307)
T COG3386 29 GPVWDPDRGALLWVDILGGRIHRLDPETGKKR-VFP-SPGGFSSGALIDAGGRLIACEH--GVRLLDPDTGGKITLLAEP 104 (307)
T ss_pred CccCcCCCCEEEEEeCCCCeEEEecCCcCceE-EEE-CCCCcccceeecCCCeEEEEcc--ccEEEeccCCceeEEeccc
Confidence 34588877755443 45677888887655432 222 2333444444444555555533 345567665554222221
Q ss_pred ----CCccEEEEEEcCCCCEEEEeeC-----------CCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecC-
Q psy4393 110 ----HSNYVFCCNFNPQSNLIVSGSF-----------DESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY- 173 (247)
Q Consensus 110 ----~~~~v~~~~~~~~~~~l~~~~~-----------d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~- 173 (247)
.....+.....|+|.+.++.-. -|.++.+|. .+...+.+..+-..-+.++|+||++.|+.+..
T Consensus 105 ~~~~~~~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p-~g~~~~l~~~~~~~~NGla~SpDg~tly~aDT~ 183 (307)
T COG3386 105 EDGLPLNRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDP-DGGVVRLLDDDLTIPNGLAFSPDGKTLYVADTP 183 (307)
T ss_pred cCCCCcCCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcC-CCCEEEeecCcEEecCceEECCCCCEEEEEeCC
Confidence 1123456677888887765433 133455554 34444444443344577999999987776644
Q ss_pred CCeEEEEeCCC--ce----eeeeeccCCCCCeEEEEECCCCCEEEEEEcCC-eEEEEECCCcceEEEEccCC
Q psy4393 174 DGLCRIWDTAS--GQ----CLKTLIDDDNPPVSFVKFSPNGKYILAATLDN-TLKLWDSKVVTPAIICSTPL 238 (247)
Q Consensus 174 dg~i~v~d~~~--~~----~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg-~i~vwd~~~~~~~~~~~~~~ 238 (247)
.+.|.-|+... +. ............--.++.+.+|.+-+++..+| .|.+|+.+ +.++..+..|.
T Consensus 184 ~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~pd-G~l~~~i~lP~ 254 (307)
T COG3386 184 ANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFNPD-GKLLGEIKLPV 254 (307)
T ss_pred CCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEECCC-CcEEEEEECCC
Confidence 47888887652 11 11111112222234567778888776554444 99999988 77777777774
No 372
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.58 E-value=0.02 Score=43.94 Aligned_cols=202 Identities=14% Similarity=0.201 Sum_probs=114.1
Q ss_pred EEEECCCCC-EEEEEeCCCe-EEEEecCCCeEEEEEecccCC-e-EEEEECCCCCEEEEEcCC-----CeEEEEECCCc-
Q psy4393 32 SVKFSPNGE-WLASSSADKL-IKIWGAYDGKFEKTISGHKLG-I-SDVAWSSDSRLLVSGSDD-----KTLKIWELSSG- 101 (247)
Q Consensus 32 ~~~~s~~~~-~l~~~~~dg~-v~iw~~~~~~~~~~~~~~~~~-v-~~~~~~~~~~~l~~~~~d-----~~i~v~d~~~~- 101 (247)
.++|+|.-. -++.+-.-|+ ..++|..+......+...+.. . ---.|+|||.+|.+.-.| |.|-+||.+.+
T Consensus 72 gi~~~p~~~ravafARrPGtf~~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~dG~~LYATEndfd~~rGViGvYd~r~~f 151 (366)
T COG3490 72 GIAFHPALPRAVAFARRPGTFAMVFDPNGAQEPVTLVSQEGRHFYGHGVFSPDGRLLYATENDFDPNRGVIGVYDAREGF 151 (366)
T ss_pred CeecCCCCcceEEEEecCCceEEEECCCCCcCcEEEecccCceeecccccCCCCcEEEeecCCCCCCCceEEEEeccccc
Confidence 466777544 3444555554 345666555443333211111 0 012589999988776543 68999998743
Q ss_pred eEEEEEecCCccEEEEEEcCCCCEEEEeeC------------------CCCEEEEECCCCeEEEee--c--CCCCCeEEE
Q psy4393 102 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSF------------------DESVRIWDVRTGKCLKTL--P--AHSDPVSAV 159 (247)
Q Consensus 102 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------------------d~~i~v~d~~~~~~~~~~--~--~~~~~i~~~ 159 (247)
+.+..+..+.-.-..+.|.+||..++.+.. .-++.+.|..+|+.+... . .+...+..+
T Consensus 152 qrvgE~~t~GiGpHev~lm~DGrtlvvanGGIethpdfgR~~lNldsMePSlvlld~atG~liekh~Lp~~l~~lSiRHl 231 (366)
T COG3490 152 QRVGEFSTHGIGPHEVTLMADGRTLVVANGGIETHPDFGRTELNLDSMEPSLVLLDAATGNLIEKHTLPASLRQLSIRHL 231 (366)
T ss_pred ceecccccCCcCcceeEEecCCcEEEEeCCceecccccCccccchhhcCccEEEEeccccchhhhccCchhhhhcceeee
Confidence 334455555544567789999998887643 113555665666554432 2 234467888
Q ss_pred EECCCCCEEEEecCCCeE-----EEEeCCCceeeeeeccCC------CCCeEEEEECCCCCEEEEEEcC-CeEEEEECCC
Q psy4393 160 HFNRDGSLIVSSSYDGLC-----RIWDTASGQCLKTLIDDD------NPPVSFVKFSPNGKYILAATLD-NTLKLWDSKV 227 (247)
Q Consensus 160 ~~~~~~~~l~~~~~dg~i-----~v~d~~~~~~~~~~~~~~------~~~v~~~~~s~~~~~l~~~~~d-g~i~vwd~~~ 227 (247)
+..+||+.++.+-..|.- .+=....++.++-+...+ ..-|-+++.+-+..+++..+.. +..-+||.++
T Consensus 232 d~g~dgtvwfgcQy~G~~~d~ppLvg~~~~g~~l~~~~~pee~~~~~anYigsiA~n~~~glV~lTSP~GN~~vi~da~t 311 (366)
T COG3490 232 DIGRDGTVWFGCQYRGPRNDLPPLVGHFRKGEPLEFLDLPEEQTAAFANYIGSIAANRRDGLVALTSPRGNRAVIWDAAT 311 (366)
T ss_pred eeCCCCcEEEEEEeeCCCccCCcceeeccCCCcCcccCCCHHHHHHHHhhhhheeecccCCeEEEecCCCCeEEEEEcCC
Confidence 888898877766544421 011111222222111111 0124567777777777777754 5788999998
Q ss_pred cceEEE
Q psy4393 228 VTPAII 233 (247)
Q Consensus 228 ~~~~~~ 233 (247)
+..+..
T Consensus 312 G~vv~~ 317 (366)
T COG3490 312 GAVVSE 317 (366)
T ss_pred CcEEec
Confidence 876544
No 373
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=97.58 E-value=0.028 Score=45.61 Aligned_cols=186 Identities=21% Similarity=0.278 Sum_probs=101.0
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecc-----------------cCCeEEEEECCCCCEEEEEcC
Q psy4393 27 TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH-----------------KLGISDVAWSSDSRLLVSGSD 89 (247)
Q Consensus 27 ~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~-----------------~~~v~~~~~~~~~~~l~~~~~ 89 (247)
...+....|+|+|+.++.. .++.|.+++..++...+..... -..-..+-|+||+++|+....
T Consensus 42 ~~~~~~~~~sP~g~~~~~v-~~~nly~~~~~~~~~~~lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~ 120 (353)
T PF00930_consen 42 PPKLQDAKWSPDGKYIAFV-RDNNLYLRDLATGQETQLTTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRF 120 (353)
T ss_dssp ETTBSEEEE-SSSTEEEEE-ETTEEEEESSTTSEEEESES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEE
T ss_pred ccccccceeecCCCeeEEE-ecCceEEEECCCCCeEEeccccceeEEcCccceeccccccccccceEECCCCCEEEEEEE
Confidence 4568889999999999876 4678999987766443322111 112356789999999876532
Q ss_pred CC------------------------------------eEEEEECCCceEEE-EE----ecCCccEEEEEEcCCCCEEEE
Q psy4393 90 DK------------------------------------TLKIWELSSGKCLK-TL----KGHSNYVFCCNFNPQSNLIVS 128 (247)
Q Consensus 90 d~------------------------------------~i~v~d~~~~~~~~-~~----~~~~~~v~~~~~~~~~~~l~~ 128 (247)
|- .+.++|+.+++... .. ......+..+.|.+++..++.
T Consensus 121 d~~~v~~~~~~~~~~~~~~yp~~~~~~YPk~G~~np~v~l~v~~~~~~~~~~~~~~~~~~~~~~yl~~v~W~~d~~~l~~ 200 (353)
T PF00930_consen 121 DEREVPEYPLPDYSPPDSQYPEVESIRYPKAGDPNPRVSLFVVDLASGKTTELDPPNSLNPQDYYLTRVGWSPDGKRLWV 200 (353)
T ss_dssp E-TTS-EEEEEEESSSTESS-EEEEEE--BTTS---EEEEEEEESSSTCCCEE---HHHHTSSEEEEEEEEEETTEEEEE
T ss_pred CCcCCceEEeeccCCccccCCcccccccCCCCCcCCceEEEEEECCCCcEEEeeeccccCCCccCcccceecCCCcEEEE
Confidence 21 13344554443211 11 123345677889888884443
Q ss_pred ee--CCC---CEEEEECCCCeEEEeec-CCCCC---eEEEEEC-CCCC-EEEEecCCC--eEEEEeCCCceeeeeeccCC
Q psy4393 129 GS--FDE---SVRIWDVRTGKCLKTLP-AHSDP---VSAVHFN-RDGS-LIVSSSYDG--LCRIWDTASGQCLKTLIDDD 195 (247)
Q Consensus 129 ~~--~d~---~i~v~d~~~~~~~~~~~-~~~~~---i~~~~~~-~~~~-~l~~~~~dg--~i~v~d~~~~~~~~~~~~~~ 195 (247)
.- .+. .+.++|..++....... ...+. -....+. +++. ++.....+| +|.+++...+... .+...
T Consensus 201 ~~~nR~q~~~~l~~~d~~tg~~~~~~~e~~~~Wv~~~~~~~~~~~~~~~~l~~s~~~G~~hly~~~~~~~~~~--~lT~G 278 (353)
T PF00930_consen 201 QWLNRDQNRLDLVLCDASTGETRVVLEETSDGWVDVYDPPHFLGPDGNEFLWISERDGYRHLYLYDLDGGKPR--QLTSG 278 (353)
T ss_dssp EEEETTSTEEEEEEEEECTTTCEEEEEEESSSSSSSSSEEEE-TTTSSEEEEEEETTSSEEEEEEETTSSEEE--ESS-S
T ss_pred EEcccCCCEEEEEEEECCCCceeEEEEecCCcceeeecccccccCCCCEEEEEEEcCCCcEEEEEccccccee--ccccC
Confidence 32 222 36677877654322211 11121 1234444 5555 444445666 5666677766532 33344
Q ss_pred CCCe-EEEEECCCCCEEEEEE
Q psy4393 196 NPPV-SFVKFSPNGKYILAAT 215 (247)
Q Consensus 196 ~~~v-~~~~~s~~~~~l~~~~ 215 (247)
...| ..+.++++++.|+..+
T Consensus 279 ~~~V~~i~~~d~~~~~iyf~a 299 (353)
T PF00930_consen 279 DWEVTSILGWDEDNNRIYFTA 299 (353)
T ss_dssp SS-EEEEEEEECTSSEEEEEE
T ss_pred ceeecccceEcCCCCEEEEEe
Confidence 4556 3477899888776544
No 374
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=97.55 E-value=0.0088 Score=39.13 Aligned_cols=92 Identities=14% Similarity=0.240 Sum_probs=60.4
Q ss_pred CEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCCCeEEEE
Q psy4393 124 NLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK 203 (247)
Q Consensus 124 ~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~ 203 (247)
+.|+.|+.|..|++|+- .+.+.++.. .+.+.+++-... ..++.+-.+|+|-+|+-..... +. .....++....
T Consensus 16 ~eLlvGs~D~~IRvf~~--~e~~~Ei~e-~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~~~RlW-Ri--KSK~~~~~~~~ 88 (111)
T PF14783_consen 16 NELLVGSDDFEIRVFKG--DEIVAEITE-TDKVTSLCSLGG-GRFAYALANGTVGVYDRSQRLW-RI--KSKNQVTSMAF 88 (111)
T ss_pred ceEEEecCCcEEEEEeC--CcEEEEEec-ccceEEEEEcCC-CEEEEEecCCEEEEEeCcceee-ee--ccCCCeEEEEE
Confidence 67899999999999984 356666655 456777776665 5588888999999997643221 11 11222333344
Q ss_pred ECCCC---CEEEEEEcCCeEEE
Q psy4393 204 FSPNG---KYILAATLDNTLKL 222 (247)
Q Consensus 204 ~s~~~---~~l~~~~~dg~i~v 222 (247)
++.++ +.|++|=.+|.|.+
T Consensus 89 ~D~~gdG~~eLI~GwsnGkve~ 110 (111)
T PF14783_consen 89 YDINGDGVPELIVGWSNGKVEV 110 (111)
T ss_pred EcCCCCCceEEEEEecCCeEEe
Confidence 45443 36888888888754
No 375
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=97.55 E-value=0.024 Score=44.10 Aligned_cols=141 Identities=20% Similarity=0.248 Sum_probs=80.9
Q ss_pred CCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceEEE-----------
Q psy4393 37 PNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLK----------- 105 (247)
Q Consensus 37 ~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~----------- 105 (247)
..++.|+.|+.+| +.+++..+......+. +...|..+...|+-+.+++-+ |+.+.++++..-....
T Consensus 5 ~~~~~L~vGt~~G-l~~~~~~~~~~~~~i~-~~~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l~~~~~~~~~~~~~~~ 81 (275)
T PF00780_consen 5 SWGDRLLVGTEDG-LYVYDLSDPSKPTRIL-KLSSITQLSVLPELNLLLVLS-DGQLYVYDLDSLEPVSTSAPLAFPKSR 81 (275)
T ss_pred cCCCEEEEEECCC-EEEEEecCCccceeEe-ecceEEEEEEecccCEEEEEc-CCccEEEEchhhccccccccccccccc
Confidence 4577888898888 8888883322222222 233499999998877766664 4999999986533222
Q ss_pred ----EEecCCccEEEEE--EcCCCCEEEEeeCCCCEEEEECCCC-----eEEEeecCCCCCeEEEEECCCCCEEEEecCC
Q psy4393 106 ----TLKGHSNYVFCCN--FNPQSNLIVSGSFDESVRIWDVRTG-----KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 174 (247)
Q Consensus 106 ----~~~~~~~~v~~~~--~~~~~~~l~~~~~d~~i~v~d~~~~-----~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 174 (247)
.+. ....+...+ -.+.+...+.....+.|.+|..... ...+++.. ...+..+.|. +..++.|..+
T Consensus 82 ~~~~~~~-~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~~~~ke~~l-p~~~~~i~~~--~~~i~v~~~~ 157 (275)
T PF00780_consen 82 SLPTKLP-ETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRNSFSKLLKEISL-PDPPSSIAFL--GNKICVGTSK 157 (275)
T ss_pred ccccccc-ccCCeeEEeeccccccceEEEEEECCEEEEEEEECCcccccceeEEEEc-CCCcEEEEEe--CCEEEEEeCC
Confidence 111 111232222 1233334444445558888877653 34455544 3567788887 4456666533
Q ss_pred CeEEEEeCCCc
Q psy4393 175 GLCRIWDTASG 185 (247)
Q Consensus 175 g~i~v~d~~~~ 185 (247)
+ ..+.|+.++
T Consensus 158 ~-f~~idl~~~ 167 (275)
T PF00780_consen 158 G-FYLIDLNTG 167 (275)
T ss_pred c-eEEEecCCC
Confidence 3 555666543
No 376
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=97.53 E-value=0.021 Score=44.91 Aligned_cols=150 Identities=13% Similarity=0.234 Sum_probs=77.1
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEEC-CCceEEE
Q psy4393 27 TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWEL-SSGKCLK 105 (247)
Q Consensus 27 ~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~-~~~~~~~ 105 (247)
.+.+..+.-+++|++++++.......-|+.-.......-.....++..+.|.|++.+.+.+ ..|.++.=+. ...+...
T Consensus 144 ~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~~lw~~~-~Gg~~~~s~~~~~~~~w~ 222 (302)
T PF14870_consen 144 SGSINDITRSSDGRYVAVSSRGNFYSSWDPGQTTWQPHNRNSSRRIQSMGFSPDGNLWMLA-RGGQIQFSDDPDDGETWS 222 (302)
T ss_dssp ---EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS-EEEE--SSS-EEEEEE-TTS-EEEEE-TTTEEEEEE-TTEEEEE-
T ss_pred cceeEeEEECCCCcEEEEECcccEEEEecCCCccceEEccCccceehhceecCCCCEEEEe-CCcEEEEccCCCCccccc
Confidence 4668888889999999887665555677653322333333346679999999998876655 7888887762 2222211
Q ss_pred E----EecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeec---CCCCCeEEEEECCCCCEEEEecCCCeEE
Q psy4393 106 T----LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLP---AHSDPVSAVHFNRDGSLIVSSSYDGLCR 178 (247)
Q Consensus 106 ~----~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~---~~~~~i~~~~~~~~~~~l~~~~~dg~i~ 178 (247)
. ++...-.+..++|.+++...++|+. |.+ +.....|+.-+..+ .-......+.|.++.+-++. +.+|.+.
T Consensus 223 ~~~~~~~~~~~~~ld~a~~~~~~~wa~gg~-G~l-~~S~DgGktW~~~~~~~~~~~n~~~i~f~~~~~gf~l-G~~G~ll 299 (302)
T PF14870_consen 223 EPIIPIKTNGYGILDLAYRPPNEIWAVGGS-GTL-LVSTDGGKTWQKDRVGENVPSNLYRIVFVNPDKGFVL-GQDGVLL 299 (302)
T ss_dssp --B-TTSS--S-EEEEEESSSS-EEEEEST-T-E-EEESSTTSS-EE-GGGTTSSS---EEEEEETTEEEEE--STTEEE
T ss_pred cccCCcccCceeeEEEEecCCCCEEEEeCC-ccE-EEeCCCCccceECccccCCCCceEEEEEcCCCceEEE-CCCcEEE
Confidence 1 1112223788999998888776654 433 33334454433332 22344677888665555554 4677765
Q ss_pred EE
Q psy4393 179 IW 180 (247)
Q Consensus 179 v~ 180 (247)
-|
T Consensus 300 ~~ 301 (302)
T PF14870_consen 300 RY 301 (302)
T ss_dssp EE
T ss_pred Ee
Confidence 44
No 377
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=97.52 E-value=0.029 Score=44.16 Aligned_cols=157 Identities=15% Similarity=0.182 Sum_probs=81.5
Q ss_pred EEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECC-
Q psy4393 63 KTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR- 141 (247)
Q Consensus 63 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~- 141 (247)
.........+..+.-+++|.+++++.......-||.-...-...-+....++..+.|.|++.+.+.+ ..|.++.=+..
T Consensus 138 ~~~~~~~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~~lw~~~-~Gg~~~~s~~~~ 216 (302)
T PF14870_consen 138 AVVSETSGSINDITRSSDGRYVAVSSRGNFYSSWDPGQTTWQPHNRNSSRRIQSMGFSPDGNLWMLA-RGGQIQFSDDPD 216 (302)
T ss_dssp EEE-S----EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS-EEEE--SSS-EEEEEE-TTS-EEEEE-TTTEEEEEE-TT
T ss_pred EcccCCcceeEeEEECCCCcEEEEECcccEEEEecCCCccceEEccCccceehhceecCCCCEEEEe-CCcEEEEccCCC
Confidence 3344445668888889999988888766666677754333333334456789999999998887755 78888877722
Q ss_pred CCeEEEe----ecCCCCCeEEEEECCCCCEEEEecCCCeEEEEeCCCceeeeeecc--CCCCCeEEEEECCCCCEEEEEE
Q psy4393 142 TGKCLKT----LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID--DDNPPVSFVKFSPNGKYILAAT 215 (247)
Q Consensus 142 ~~~~~~~----~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~ 215 (247)
..+.... +......+..+++.+++...++|+. |.+ +...+.++.-+.-.. .-...+..+.|.++.+-++ -+
T Consensus 217 ~~~~w~~~~~~~~~~~~~~ld~a~~~~~~~wa~gg~-G~l-~~S~DgGktW~~~~~~~~~~~n~~~i~f~~~~~gf~-lG 293 (302)
T PF14870_consen 217 DGETWSEPIIPIKTNGYGILDLAYRPPNEIWAVGGS-GTL-LVSTDGGKTWQKDRVGENVPSNLYRIVFVNPDKGFV-LG 293 (302)
T ss_dssp EEEEE---B-TTSS--S-EEEEEESSSS-EEEEEST-T-E-EEESSTTSS-EE-GGGTTSSS---EEEEEETTEEEE-E-
T ss_pred CccccccccCCcccCceeeEEEEecCCCCEEEEeCC-ccE-EEeCCCCccceECccccCCCCceEEEEEcCCCceEE-EC
Confidence 2222111 1122334788999998888887764 433 344555554433322 2233466777766544444 44
Q ss_pred cCCeEEEE
Q psy4393 216 LDNTLKLW 223 (247)
Q Consensus 216 ~dg~i~vw 223 (247)
.+|.|.-|
T Consensus 294 ~~G~ll~~ 301 (302)
T PF14870_consen 294 QDGVLLRY 301 (302)
T ss_dssp STTEEEEE
T ss_pred CCcEEEEe
Confidence 57877655
No 378
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=97.51 E-value=0.049 Score=46.63 Aligned_cols=191 Identities=14% Similarity=0.091 Sum_probs=114.8
Q ss_pred CCEEEEEeCCCeEEEEecCCCeEEEEEeccc-CCeEE----------EEECCCCCEEEEEcCCCeEEEEECCCceEEEEE
Q psy4393 39 GEWLASSSADKLIKIWGAYDGKFEKTISGHK-LGISD----------VAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTL 107 (247)
Q Consensus 39 ~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~-~~v~~----------~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~ 107 (247)
+..|+.++.++.|.-.|..+++......... ..+.. ++. .+..++.++.++.+.-+|.++++.+...
T Consensus 69 ~g~vyv~s~~g~v~AlDa~TGk~lW~~~~~~~~~~~~~~~~~~~~rg~av--~~~~v~v~t~dg~l~ALDa~TGk~~W~~ 146 (527)
T TIGR03075 69 DGVMYVTTSYSRVYALDAKTGKELWKYDPKLPDDVIPVMCCDVVNRGVAL--YDGKVFFGTLDARLVALDAKTGKVVWSK 146 (527)
T ss_pred CCEEEEECCCCcEEEEECCCCceeeEecCCCCcccccccccccccccceE--ECCEEEEEcCCCEEEEEECCCCCEEeec
Confidence 4566677778888888998988877664321 11111 111 2356777888999999999999877654
Q ss_pred ecCCcc-EEEEEEcC--CCCEEEEee------CCCCEEEEECCCCeEEEeecCCCC------------------------
Q psy4393 108 KGHSNY-VFCCNFNP--QSNLIVSGS------FDESVRIWDVRTGKCLKTLPAHSD------------------------ 154 (247)
Q Consensus 108 ~~~~~~-v~~~~~~~--~~~~l~~~~------~d~~i~v~d~~~~~~~~~~~~~~~------------------------ 154 (247)
...... -..+.-.| .+..++.+. .+|.|..+|.++|+.+..+..-..
T Consensus 147 ~~~~~~~~~~~tssP~v~~g~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~~~p~~~~~~~~~~~~~~~~~~~~tw~~~ 226 (527)
T TIGR03075 147 KNGDYKAGYTITAAPLVVKGKVITGISGGEFGVRGYVTAYDAKTGKLVWRRYTVPGDMGYLDKADKPVGGEPGAKTWPGD 226 (527)
T ss_pred ccccccccccccCCcEEECCEEEEeecccccCCCcEEEEEECCCCceeEeccCcCCCcccccccccccccccccCCCCCC
Confidence 321100 00111112 123444443 267899999999987765432110
Q ss_pred --------CeEEEEECCCCCEEEEecCC-----C-----------eEEEEeCCCceeeeeeccCC--------CCCeEEE
Q psy4393 155 --------PVSAVHFNRDGSLIVSSSYD-----G-----------LCRIWDTASGQCLKTLIDDD--------NPPVSFV 202 (247)
Q Consensus 155 --------~i~~~~~~~~~~~l~~~~~d-----g-----------~i~v~d~~~~~~~~~~~~~~--------~~~v~~~ 202 (247)
.-..+.++|...+++.+..+ + .|...|+++++..=.+...+ ..+-..+
T Consensus 227 ~~~~gg~~~W~~~s~D~~~~lvy~~tGnp~p~~~~~r~gdnl~~~s~vAld~~TG~~~W~~Q~~~~D~wD~d~~~~p~l~ 306 (527)
T TIGR03075 227 AWKTGGGATWGTGSYDPETNLIYFGTGNPSPWNSHLRPGDNLYTSSIVARDPDTGKIKWHYQTTPHDEWDYDGVNEMILF 306 (527)
T ss_pred ccccCCCCccCceeEcCCCCeEEEeCCCCCCCCCCCCCCCCccceeEEEEccccCCEEEeeeCCCCCCccccCCCCcEEE
Confidence 11235677766666665522 2 56677888887654332211 0111223
Q ss_pred EECCCCC---EEEEEEcCCeEEEEECCCcceE
Q psy4393 203 KFSPNGK---YILAATLDNTLKLWDSKVVTPA 231 (247)
Q Consensus 203 ~~s~~~~---~l~~~~~dg~i~vwd~~~~~~~ 231 (247)
.+..+|+ .++.++.+|.+.+.|.++++++
T Consensus 307 d~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~i 338 (527)
T TIGR03075 307 DLKKDGKPRKLLAHADRNGFFYVLDRTNGKLL 338 (527)
T ss_pred EeccCCcEEEEEEEeCCCceEEEEECCCCcee
Confidence 4445776 7788999999999999999875
No 379
>KOG2079|consensus
Probab=97.41 E-value=0.0012 Score=58.70 Aligned_cols=101 Identities=26% Similarity=0.411 Sum_probs=74.3
Q ss_pred CCCEEEEeeCCCCEEEEECCCCeE-EEeecCCCCCeEEEEECCCCCEEEEecCCCeEEEEeCCCceeeeeeccCC--CCC
Q psy4393 122 QSNLIVSGSFDESVRIWDVRTGKC-LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD--NPP 198 (247)
Q Consensus 122 ~~~~l~~~~~d~~i~v~d~~~~~~-~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~--~~~ 198 (247)
.+..++.|+..|.+-..|.+..-. ...-....++|++++|+.+|..++.|-.+|.|.+||...++..+.+.... ...
T Consensus 98 ~~~~ivi~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~t~ 177 (1206)
T KOG2079|consen 98 VVVPIVIGTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAPVTG 177 (1206)
T ss_pred eeeeEEEEcCchhhhhhhhhcccchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCCccce
Confidence 456788899999999888875321 11112335789999999999999999999999999999988776654332 234
Q ss_pred eEEEEECCCCCEEEEEEcCCeEEEEE
Q psy4393 199 VSFVKFSPNGKYILAATLDNTLKLWD 224 (247)
Q Consensus 199 v~~~~~s~~~~~l~~~~~dg~i~vwd 224 (247)
+..+.+..++..++++...|. +|.
T Consensus 178 vi~v~~t~~nS~llt~D~~Gs--f~~ 201 (1206)
T KOG2079|consen 178 VIFVGRTSQNSKLLTSDTGGS--FWK 201 (1206)
T ss_pred EEEEEEeCCCcEEEEccCCCc--eEE
Confidence 455666777777888887776 565
No 380
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=97.40 E-value=0.035 Score=42.44 Aligned_cols=184 Identities=10% Similarity=0.092 Sum_probs=111.6
Q ss_pred CCCeEEEEECCCCCEEEEEeCCC--eEEEEecCCCeEEEEEecccCC-eEEEEECCCCCEEEEEcCCCeEEEEECCCceE
Q psy4393 27 TKAVSSVKFSPNGEWLASSSADK--LIKIWGAYDGKFEKTISGHKLG-ISDVAWSSDSRLLVSGSDDKTLKIWELSSGKC 103 (247)
Q Consensus 27 ~~~v~~~~~s~~~~~l~~~~~dg--~v~iw~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~ 103 (247)
..-...+.|..+|.++-+.+.-| .|+.+|..+++......-...- -..++... ++...-.=.++...+||..+-+.
T Consensus 44 ~aFTQGL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~~-d~l~qLTWk~~~~f~yd~~tl~~ 122 (264)
T PF05096_consen 44 TAFTQGLEFLDDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGITILG-DKLYQLTWKEGTGFVYDPNTLKK 122 (264)
T ss_dssp T-EEEEEEEEETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEEEET-TEEEEEESSSSEEEEEETTTTEE
T ss_pred cccCccEEecCCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCccccceeEEEEC-CEEEEEEecCCeEEEEccccceE
Confidence 34466788878888888777766 6888999988876554322111 11223332 33444455788999999998888
Q ss_pred EEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCC--C---CeEEEEECCCCCEEEEecCCCeEE
Q psy4393 104 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHS--D---PVSAVHFNRDGSLIVSSSYDGLCR 178 (247)
Q Consensus 104 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~--~---~i~~~~~~~~~~~l~~~~~dg~i~ 178 (247)
+..+.-. ..=+.++ .++..++.......++.+|..+.+....+.... . .++.+-+- +|...|=.-....|.
T Consensus 123 ~~~~~y~-~EGWGLt--~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE~i-~G~IyANVW~td~I~ 198 (264)
T PF05096_consen 123 IGTFPYP-GEGWGLT--SDGKRLIMSDGSSRLYFLDPETFKEVRTIQVTDNGRPVSNLNELEYI-NGKIYANVWQTDRIV 198 (264)
T ss_dssp EEEEE-S-SS--EEE--ECSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EETTEE---EEEEEEE-TTEEEEEETTSSEEE
T ss_pred EEEEecC-CcceEEE--cCCCEEEEECCccceEEECCcccceEEEEEEEECCEECCCcEeEEEE-cCEEEEEeCCCCeEE
Confidence 7777543 3334555 445666666667789999998877666554322 1 24445554 676666666677788
Q ss_pred EEeCCCceeeeeec--------c------CCCCCeEEEEECCCCCEEEEEE
Q psy4393 179 IWDTASGQCLKTLI--------D------DDNPPVSFVKFSPNGKYILAAT 215 (247)
Q Consensus 179 v~d~~~~~~~~~~~--------~------~~~~~v~~~~~s~~~~~l~~~~ 215 (247)
..|..+|+....+- . ......+.+|++|..+.|...+
T Consensus 199 ~Idp~tG~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~vTG 249 (264)
T PF05096_consen 199 RIDPETGKVVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRLFVTG 249 (264)
T ss_dssp EEETTT-BEEEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTTTEEEEEE
T ss_pred EEeCCCCeEEEEEEhhHhhhcccccccccccCCeeEeEeEeCCCCEEEEEe
Confidence 88998887655431 0 1124578899998877665554
No 381
>PHA03098 kelch-like protein; Provisional
Probab=97.39 E-value=0.031 Score=48.01 Aligned_cols=146 Identities=18% Similarity=0.213 Sum_probs=70.8
Q ss_pred CCCEEEEEcCC-----CeEEEEECCCceEEEEEecCCccEEEEEEcCCCCEEEEeeCC------CCEEEEECCCCeEEE-
Q psy4393 80 DSRLLVSGSDD-----KTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD------ESVRIWDVRTGKCLK- 147 (247)
Q Consensus 80 ~~~~l~~~~~d-----~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~v~d~~~~~~~~- 147 (247)
++..++.|+.+ ..+..||..+.+....-.-...........-++.+.+.|+.+ ..+..||+.+.+-..
T Consensus 342 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~lp~~r~~~~~~~~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~ 421 (534)
T PHA03098 342 NNRIYVIGGIYNSISLNTVESWKPGESKWREEPPLIFPRYNPCVVNVNNLIYVIGGISKNDELLKTVECFSLNTNKWSKG 421 (534)
T ss_pred CCEEEEEeCCCCCEecceEEEEcCCCCceeeCCCcCcCCccceEEEECCEEEEECCcCCCCcccceEEEEeCCCCeeeec
Confidence 56666777754 246778877654321110000111111122346677777632 357888987654211
Q ss_pred -eecCCCCCeEEEEECCCCCEEEEecCCC--------eEEEEeCCCceeeeeeccCC-CCCeEEEEECCCCCEEEEEEcC
Q psy4393 148 -TLPAHSDPVSAVHFNRDGSLIVSSSYDG--------LCRIWDTASGQCLKTLIDDD-NPPVSFVKFSPNGKYILAATLD 217 (247)
Q Consensus 148 -~~~~~~~~i~~~~~~~~~~~l~~~~~dg--------~i~v~d~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~~d 217 (247)
.+...... .++.. .++..++.|+.+. .+.+||..+.+....-.... ......+. .+++.++.|+.+
T Consensus 422 ~~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~--~~~~iyv~GG~~ 497 (534)
T PHA03098 422 SPLPISHYG-GCAIY-HDGKIYVIGGISYIDNIKVYNIVESYNPVTNKWTELSSLNFPRINASLCI--FNNKIYVVGGDK 497 (534)
T ss_pred CCCCccccC-ceEEE-ECCEEEEECCccCCCCCcccceEEEecCCCCceeeCCCCCcccccceEEE--ECCEEEEEcCCc
Confidence 11111111 12222 2456666666432 37889988765433211111 11111222 266777777654
Q ss_pred -----CeEEEEECCCcc
Q psy4393 218 -----NTLKLWDSKVVT 229 (247)
Q Consensus 218 -----g~i~vwd~~~~~ 229 (247)
+.+.+||.....
T Consensus 498 ~~~~~~~v~~yd~~~~~ 514 (534)
T PHA03098 498 YEYYINEIEVYDDKTNT 514 (534)
T ss_pred CCcccceeEEEeCCCCE
Confidence 478889877653
No 382
>KOG2444|consensus
Probab=97.37 E-value=0.00035 Score=51.29 Aligned_cols=106 Identities=16% Similarity=0.193 Sum_probs=69.6
Q ss_pred CCCEEEEeeCCCCEEEEECCCCeEE-EeecCCCCCeEEEE-ECCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCCCe
Q psy4393 122 QSNLIVSGSFDESVRIWDVRTGKCL-KTLPAHSDPVSAVH-FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199 (247)
Q Consensus 122 ~~~~l~~~~~d~~i~v~d~~~~~~~-~~~~~~~~~i~~~~-~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v 199 (247)
.+..++.|+.+|.|++|........ .........+.++. ...++.+..+++.+|.|+.|++.-++.+.....+...++
T Consensus 69 ~~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~ 148 (238)
T KOG2444|consen 69 ASAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFESG 148 (238)
T ss_pred cCceEEeecccceEEEecCCccchHHHhhhcccccceeccccccccceeEEeccCCceeeeccccCceeeeeccccCCCc
Confidence 4567889999999999987622111 11112223343332 233456788899999999999987776554433332455
Q ss_pred EEEEECCCCCEEEEE--EcCCeEEEEECCC
Q psy4393 200 SFVKFSPNGKYILAA--TLDNTLKLWDSKV 227 (247)
Q Consensus 200 ~~~~~s~~~~~l~~~--~~dg~i~vwd~~~ 227 (247)
..+..+..+++++.+ +.|..++.|++..
T Consensus 149 e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~ 178 (238)
T KOG2444|consen 149 EELIVVGSDEFLKIADTSHDRVLKKWNVEK 178 (238)
T ss_pred ceeEEecCCceEEeeccccchhhhhcchhh
Confidence 566666777888887 8888888888643
No 383
>KOG2395|consensus
Probab=97.25 E-value=0.0091 Score=49.40 Aligned_cols=142 Identities=18% Similarity=0.257 Sum_probs=88.5
Q ss_pred CCCEEE-EEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCE-------EEEEcCCCeEEEEECCCceE--EEEE
Q psy4393 38 NGEWLA-SSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRL-------LVSGSDDKTLKIWELSSGKC--LKTL 107 (247)
Q Consensus 38 ~~~~l~-~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-------l~~~~~d~~i~v~d~~~~~~--~~~~ 107 (247)
+.++|+ .+.....++-.|++.|+.+....-+.. |.-+.+.|+.+. -+.|-.+..|.-||++-... +...
T Consensus 344 dsnlil~~~~~~~~l~klDIE~GKIVeEWk~~~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~~ 422 (644)
T KOG2395|consen 344 DSNLILMDGGEQDKLYKLDIERGKIVEEWKFEDD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAVV 422 (644)
T ss_pred ccceEeeCCCCcCcceeeecccceeeeEeeccCC-cceeeccCCcchhcccccccEEeecCCceEEecccccCcceeeee
Confidence 334433 455556788889999988888776554 666667775431 13344566777788863221 1111
Q ss_pred ecC----CccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCCCeEEEEeC
Q psy4393 108 KGH----SNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 182 (247)
Q Consensus 108 ~~~----~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~ 182 (247)
+.+ .....|.+-. ...+++.|+.+|.|++||--..+....+++-..+|..+..+.+|+++++.+ +..+.+.|+
T Consensus 423 q~kqy~~k~nFsc~aTT-~sG~IvvgS~~GdIRLYdri~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc-~tyLlLi~t 499 (644)
T KOG2395|consen 423 QSKQYSTKNNFSCFATT-ESGYIVVGSLKGDIRLYDRIGRRAKTALPGLGDAIKHVDVTADGKWILATC-KTYLLLIDT 499 (644)
T ss_pred eccccccccccceeeec-CCceEEEeecCCcEEeehhhhhhhhhcccccCCceeeEEeeccCcEEEEec-ccEEEEEEE
Confidence 111 1123333333 345789999999999999733333344666678999999999999887655 555656654
No 384
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.20 E-value=0.065 Score=41.37 Aligned_cols=160 Identities=16% Similarity=0.204 Sum_probs=101.9
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecc-cCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceE
Q psy4393 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH-KLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKC 103 (247)
Q Consensus 25 ~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~ 103 (247)
+-+..|.++.|+|+.+.|++......-.++-..+|.....+.-. -.....+.+.-++++.++--.++.+.++.+..+..
T Consensus 83 g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~fvi~dER~~~l~~~~vd~~t~ 162 (316)
T COG3204 83 GETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQFVIVDERDRALYLFTVDADTT 162 (316)
T ss_pred cccccccceeeCCCcceEEEecCCCceEEEEecCCceEEEecccccCChhHeEEecCCEEEEEehhcceEEEEEEcCCcc
Confidence 44566999999999998888777766666655677777665321 11234567777888888877888888877665432
Q ss_pred EEEEe---------cC-CccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeE-E--EeecCCC-------CCeEEEEECC
Q psy4393 104 LKTLK---------GH-SNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC-L--KTLPAHS-------DPVSAVHFNR 163 (247)
Q Consensus 104 ~~~~~---------~~-~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~-~--~~~~~~~-------~~i~~~~~~~ 163 (247)
+..++ .+ ......++|+|....+..+-+-.-+.+|....+.. + .....+. ..++++.|++
T Consensus 163 ~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~~~~~l~~~~~~~~~~~~~~f~~DvSgl~~~~ 242 (316)
T COG3204 163 VISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQSPSSLSVHASLDPTADRDLFVLDVSGLEFNA 242 (316)
T ss_pred EEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEecCCcccccccccCcccccceEeeccccceecC
Confidence 21111 11 23466799999988888887777777777653321 1 1111111 2356677876
Q ss_pred C-CCEEEEecCCCeEEEEeCCC
Q psy4393 164 D-GSLIVSSSYDGLCRIWDTAS 184 (247)
Q Consensus 164 ~-~~~l~~~~~dg~i~v~d~~~ 184 (247)
. +.+|+-+.+++.+.-.|...
T Consensus 243 ~~~~LLVLS~ESr~l~Evd~~G 264 (316)
T COG3204 243 ITNSLLVLSDESRRLLEVDLSG 264 (316)
T ss_pred CCCcEEEEecCCceEEEEecCC
Confidence 4 45666677777777777654
No 385
>KOG4499|consensus
Probab=97.16 E-value=0.054 Score=40.46 Aligned_cols=98 Identities=17% Similarity=0.270 Sum_probs=66.3
Q ss_pred EEEEECCCCCEE-EEEcCCCeEEEEE--CCCce-----EEEEEecC---Ccc-EEEEEEcCCCCEEEEeeCCCCEEEEEC
Q psy4393 73 SDVAWSSDSRLL-VSGSDDKTLKIWE--LSSGK-----CLKTLKGH---SNY-VFCCNFNPQSNLIVSGSFDESVRIWDV 140 (247)
Q Consensus 73 ~~~~~~~~~~~l-~~~~~d~~i~v~d--~~~~~-----~~~~~~~~---~~~-v~~~~~~~~~~~l~~~~~d~~i~v~d~ 140 (247)
+.++|+.+.+.+ ++-+.+-.|.-|| ..+|. .+..++.. ... --.++.+.+|++.++.-..++|..+|.
T Consensus 161 Ngl~Wd~d~K~fY~iDsln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~dp 240 (310)
T KOG4499|consen 161 NGLAWDSDAKKFYYIDSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQKVDP 240 (310)
T ss_pred ccccccccCcEEEEEccCceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEEECC
Confidence 457898776655 4556677787787 45543 22222211 111 123455678899999888999999999
Q ss_pred CCCeEEEeecCCCCCeEEEEECC-CCCEEEE
Q psy4393 141 RTGKCLKTLPAHSDPVSAVHFNR-DGSLIVS 170 (247)
Q Consensus 141 ~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~ 170 (247)
.+|+.+.+++.....+++.+|-- +-..+++
T Consensus 241 ~tGK~L~eiklPt~qitsccFgGkn~d~~yv 271 (310)
T KOG4499|consen 241 TTGKILLEIKLPTPQITSCCFGGKNLDILYV 271 (310)
T ss_pred CCCcEEEEEEcCCCceEEEEecCCCccEEEE
Confidence 99999999988888899999953 3334443
No 386
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=97.16 E-value=0.13 Score=44.09 Aligned_cols=189 Identities=15% Similarity=0.212 Sum_probs=109.0
Q ss_pred CCeEEEEecCCCeEEEEEecccC-------------------------------CeE-EEEECCCCCEEEEEcCC-----
Q psy4393 48 DKLIKIWGAYDGKFEKTISGHKL-------------------------------GIS-DVAWSSDSRLLVSGSDD----- 90 (247)
Q Consensus 48 dg~v~iw~~~~~~~~~~~~~~~~-------------------------------~v~-~~~~~~~~~~l~~~~~d----- 90 (247)
+|.|.-+|..+++.+..+..-.. .+. .+++.|...++..+..+
T Consensus 180 ~G~v~AlD~~TG~~lW~~~~~p~~~~~~~~~~~~~~~~~~~~tw~~~~~~~gg~~~W~~~s~D~~~~lvy~~tGnp~p~~ 259 (527)
T TIGR03075 180 RGYVTAYDAKTGKLVWRRYTVPGDMGYLDKADKPVGGEPGAKTWPGDAWKTGGGATWGTGSYDPETNLIYFGTGNPSPWN 259 (527)
T ss_pred CcEEEEEECCCCceeEeccCcCCCcccccccccccccccccCCCCCCccccCCCCccCceeEcCCCCeEEEeCCCCCCCC
Confidence 67888889988887765432110 011 23555655666555422
Q ss_pred C-----------eEEEEECCCceEEEEEecCCccE---------EEEEEcCCCC---EEEEeeCCCCEEEEECCCCeEEE
Q psy4393 91 K-----------TLKIWELSSGKCLKTLKGHSNYV---------FCCNFNPQSN---LIVSGSFDESVRIWDVRTGKCLK 147 (247)
Q Consensus 91 ~-----------~i~v~d~~~~~~~~~~~~~~~~v---------~~~~~~~~~~---~l~~~~~d~~i~v~d~~~~~~~~ 147 (247)
+ .|.-.|+++|+..-.++.....+ .-+....+++ .++.+.++|.++++|-++|+.+.
T Consensus 260 ~~~r~gdnl~~~s~vAld~~TG~~~W~~Q~~~~D~wD~d~~~~p~l~d~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~i~ 339 (527)
T TIGR03075 260 SHLRPGDNLYTSSIVARDPDTGKIKWHYQTTPHDEWDYDGVNEMILFDLKKDGKPRKLLAHADRNGFFYVLDRTNGKLLS 339 (527)
T ss_pred CCCCCCCCccceeEEEEccccCCEEEeeeCCCCCCccccCCCCcEEEEeccCCcEEEEEEEeCCCceEEEEECCCCceec
Confidence 1 46667888998776665422111 1123334555 77889999999999999998752
Q ss_pred eec--C----------CC-CC----------------------------eEEEEECCCCCEEEEecCC------------
Q psy4393 148 TLP--A----------HS-DP----------------------------VSAVHFNRDGSLIVSSSYD------------ 174 (247)
Q Consensus 148 ~~~--~----------~~-~~----------------------------i~~~~~~~~~~~l~~~~~d------------ 174 (247)
..+ . .. .+ ...++++|+..+++....+
T Consensus 340 ~~~~~~~~~w~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~Pg~~Gg~~W~~~A~Dp~~g~~yvp~~~~~~~~~~~~~~~ 419 (527)
T TIGR03075 340 AEPFVDTVNWATGVDLKTGRPIEVPEARSADGKKGKPVGVCPGFLGGKNWQPMAYSPKTGLFYVPANEVCMDYEPEKVSY 419 (527)
T ss_pred cccccCCcccccccCCCCCCCccChhhCcCCCCCCCeeEECCCCcCCCCCCCceECCCCCEEEEeccccccccccccccc
Confidence 210 0 00 00 0125566665555443322
Q ss_pred ---------------------CeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcceEEE
Q psy4393 175 ---------------------GLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAII 233 (247)
Q Consensus 175 ---------------------g~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~ 233 (247)
|.+.-+|+.+++..=...... ...... +.-.+..++.++.+|.++.+|.++++++-.
T Consensus 420 ~~g~~~~~~~~~~~p~~~~~~g~l~AiD~~tGk~~W~~~~~~-p~~~~~-l~t~g~lvf~g~~~G~l~a~D~~TGe~lw~ 497 (527)
T TIGR03075 420 KKGAAYLGAGLTIKPPPDDHMGSLIAWDPITGKIVWEHKEDF-PLWGGV-LATAGDLVFYGTLEGYFKAFDAKTGEELWK 497 (527)
T ss_pred CCCCceeccccccCCCCCCCceeEEEEeCCCCceeeEecCCC-CCCCcc-eEECCcEEEEECCCCeEEEEECCCCCEeEE
Confidence 457777777776443222111 101111 112445677788899999999999998887
Q ss_pred EccCC
Q psy4393 234 CSTPL 238 (247)
Q Consensus 234 ~~~~~ 238 (247)
++.+.
T Consensus 498 ~~~g~ 502 (527)
T TIGR03075 498 FKTGS 502 (527)
T ss_pred EeCCC
Confidence 76654
No 387
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=97.14 E-value=0.09 Score=41.76 Aligned_cols=177 Identities=15% Similarity=0.165 Sum_probs=106.2
Q ss_pred CeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcC----------CCeEEEEECCCceEEEEEecCCc-c----
Q psy4393 49 KLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSD----------DKTLKIWELSSGKCLKTLKGHSN-Y---- 113 (247)
Q Consensus 49 g~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----------d~~i~v~d~~~~~~~~~~~~~~~-~---- 113 (247)
+.+.++|..+++.+..+.....+ .+..+|+++.+++++. .-.|.+||.++-.....+.-... +
T Consensus 17 ~rv~viD~d~~k~lGmi~~g~~~--~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~~~ 94 (342)
T PF06433_consen 17 SRVYVIDADSGKLLGMIDTGFLG--NVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQVV 94 (342)
T ss_dssp EEEEEEETTTTEEEEEEEEESSE--EEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B--BS
T ss_pred ceEEEEECCCCcEEEEeecccCC--ceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchheec
Confidence 47899999898888877654333 3567999999887642 33699999998776654432221 1
Q ss_pred --EEEEEEcCCCCEEEEeeC--CCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCCCeEEEEeCC-Cceee
Q psy4393 114 --VFCCNFNPQSNLIVSGSF--DESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA-SGQCL 188 (247)
Q Consensus 114 --v~~~~~~~~~~~l~~~~~--d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~-~~~~~ 188 (247)
.....++.++++++.-.. ...|.|.|+..++.+.++... ++. .+--+++ .-+.+-+.||.+.-..+. .|+..
T Consensus 95 ~~~~~~~ls~dgk~~~V~N~TPa~SVtVVDl~~~kvv~ei~~P-GC~-~iyP~~~-~~F~~lC~DGsl~~v~Ld~~Gk~~ 171 (342)
T PF06433_consen 95 PYKNMFALSADGKFLYVQNFTPATSVTVVDLAAKKVVGEIDTP-GCW-LIYPSGN-RGFSMLCGDGSLLTVTLDADGKEA 171 (342)
T ss_dssp --GGGEEE-TTSSEEEEEEESSSEEEEEEETTTTEEEEEEEGT-SEE-EEEEEET-TEEEEEETTSCEEEEEETSTSSEE
T ss_pred ccccceEEccCCcEEEEEccCCCCeEEEEECCCCceeeeecCC-CEE-EEEecCC-CceEEEecCCceEEEEECCCCCEe
Confidence 122456777777666433 345778888887777766542 222 2211222 346667779988877776 34432
Q ss_pred ee---eccCCC-CCeEEEEECCCCCEEEEEEcCCeEEEEECCCcce
Q psy4393 189 KT---LIDDDN-PPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTP 230 (247)
Q Consensus 189 ~~---~~~~~~-~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~ 230 (247)
.+ ++.... ..+..-++...+..++..+.+|.|+--|.....+
T Consensus 172 ~~~t~~F~~~~dp~f~~~~~~~~~~~~~F~Sy~G~v~~~dlsg~~~ 217 (342)
T PF06433_consen 172 QKSTKVFDPDDDPLFEHPAYSRDGGRLYFVSYEGNVYSADLSGDSA 217 (342)
T ss_dssp EEEEEESSTTTS-B-S--EEETTTTEEEEEBTTSEEEEEEETTSSE
T ss_pred EeeccccCCCCcccccccceECCCCeEEEEecCCEEEEEeccCCcc
Confidence 21 222222 2233344555666777788899999988776554
No 388
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=97.12 E-value=0.0027 Score=34.75 Aligned_cols=30 Identities=20% Similarity=0.252 Sum_probs=27.8
Q ss_pred CCCeEEEEECCCCCEEEEecCCCeEEEEeC
Q psy4393 153 SDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 182 (247)
Q Consensus 153 ~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~ 182 (247)
...|.+++|+|...++|.++.+|.|.+|.+
T Consensus 11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl 40 (47)
T PF12894_consen 11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRL 40 (47)
T ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEEC
Confidence 456899999999999999999999999988
No 389
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=97.09 E-value=0.084 Score=40.66 Aligned_cols=145 Identities=12% Similarity=0.135 Sum_probs=87.3
Q ss_pred CeEEEEECCCCCEEEEEc---CCCeEEEEECCCceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEE-CCCCeEE
Q psy4393 71 GISDVAWSSDSRLLVSGS---DDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD-VRTGKCL 146 (247)
Q Consensus 71 ~v~~~~~~~~~~~l~~~~---~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d-~~~~~~~ 146 (247)
.+.+.+++++++.++... ....+.++..... ...+. ....+....|++++...+....+...+++. ...+...
T Consensus 25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~~~--~~~~~-~g~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~~~ 101 (253)
T PF10647_consen 25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAGGP--VRPVL-TGGSLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGTGE 101 (253)
T ss_pred cccceEECCCCCeEEEEEEcCCCCEEEEEcCCCc--ceeec-cCCccccccccCCCCEEEEEcCCCceEEEEecCCCcce
Confidence 578899999999887665 3335555554322 22221 222566778999988888777677667663 3333221
Q ss_pred -EeecCC--CCCeEEEEECCCCCEEEEec---CCCeEEEEeCC---Cc--eee---eeeccCCCCCeEEEEECCCCCEEE
Q psy4393 147 -KTLPAH--SDPVSAVHFNRDGSLIVSSS---YDGLCRIWDTA---SG--QCL---KTLIDDDNPPVSFVKFSPNGKYIL 212 (247)
Q Consensus 147 -~~~~~~--~~~i~~~~~~~~~~~l~~~~---~dg~i~v~d~~---~~--~~~---~~~~~~~~~~v~~~~~s~~~~~l~ 212 (247)
...... ...|..+.++|||..++... .++.+.+--+. .+ ..+ ..........+..++|.+++.+++
T Consensus 102 ~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~~~~L~V 181 (253)
T PF10647_consen 102 PVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTDVAWSDDSTLVV 181 (253)
T ss_pred eEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccCcceeeeecCCCEEEE
Confidence 112211 12799999999999877655 34666655332 22 111 111112235678899999999888
Q ss_pred EEEcCC
Q psy4393 213 AATLDN 218 (247)
Q Consensus 213 ~~~~dg 218 (247)
.+...+
T Consensus 182 ~~~~~~ 187 (253)
T PF10647_consen 182 LGRSAG 187 (253)
T ss_pred EeCCCC
Confidence 776543
No 390
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=97.06 E-value=0.065 Score=45.28 Aligned_cols=149 Identities=15% Similarity=0.285 Sum_probs=86.1
Q ss_pred CCeEEEEECCCCCEEE-EEe--CCCeEEEEecCCCeEEEEEecccCCeEEEEECCCC----CEEEEEcCCCeEEEEECCC
Q psy4393 28 KAVSSVKFSPNGEWLA-SSS--ADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS----RLLVSGSDDKTLKIWELSS 100 (247)
Q Consensus 28 ~~v~~~~~s~~~~~l~-~~~--~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~----~~l~~~~~d~~i~v~d~~~ 100 (247)
.+|..++|. ||+.++ +.- .+|.+++=|. .+-+.-..|..+.|.|-+ -.+++.-....|.+|.+..
T Consensus 20 HPvhGlaWT-DGkqVvLT~L~l~~gE~kfGds-------~viGqFEhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~ 91 (671)
T PF15390_consen 20 HPVHGLAWT-DGKQVVLTDLQLHNGEPKFGDS-------KVIGQFEHVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCP 91 (671)
T ss_pred ccccceEec-CCCEEEEEeeeeeCCccccCCc-------cEeeccceeeeeeecCcccCCCCceEEEeccceEEEEEecc
Confidence 478899996 666544 321 2333332221 122333458899999842 2566666778899998752
Q ss_pred -----ceEEE----EEecCC-ccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCe-EEEeecCCCCCeEEEEECCCCCEEE
Q psy4393 101 -----GKCLK----TLKGHS-NYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK-CLKTLPAHSDPVSAVHFNRDGSLIV 169 (247)
Q Consensus 101 -----~~~~~----~~~~~~-~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~ 169 (247)
++.+. .+...- ---..+.|+|....++.-.....-.+++.+... .++.--...+.|.|.+|.+||..|+
T Consensus 92 s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~dvSV~~sV~~d~srVkaDi~~~G~IhCACWT~DG~RLV 171 (671)
T PF15390_consen 92 STTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTARDVSVLPSVHCDSSRVKADIKTSGLIHCACWTKDGQRLV 171 (671)
T ss_pred CccccccceeeeeeeccCCcccCCCcccccCCCceEEEEecCceeEeeeeeeCCceEEEeccCCceEEEEEecCcCCEEE
Confidence 22211 111110 012357799988877766555444455554332 2222223467899999999999876
Q ss_pred Eec-CCCeEEEEeCCC
Q psy4393 170 SSS-YDGLCRIWDTAS 184 (247)
Q Consensus 170 ~~~-~dg~i~v~d~~~ 184 (247)
++- ..=+.++||-..
T Consensus 172 VAvGSsLHSyiWd~~q 187 (671)
T PF15390_consen 172 VAVGSSLHSYIWDSAQ 187 (671)
T ss_pred EEeCCeEEEEEecCch
Confidence 653 334667888654
No 391
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=97.04 E-value=0.0031 Score=34.54 Aligned_cols=30 Identities=17% Similarity=0.325 Sum_probs=27.8
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCeEEEEec
Q psy4393 27 TKAVSSVKFSPNGEWLASSSADKLIKIWGA 56 (247)
Q Consensus 27 ~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~ 56 (247)
...|..++|+|...+||.+..+|.|.+++.
T Consensus 11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl 40 (47)
T PF12894_consen 11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRL 40 (47)
T ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEEC
Confidence 456999999999999999999999999988
No 392
>KOG2280|consensus
Probab=97.01 E-value=0.088 Score=45.70 Aligned_cols=200 Identities=17% Similarity=0.235 Sum_probs=100.2
Q ss_pred CCeEEEEECCCCCE-EEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceEEEE
Q psy4393 28 KAVSSVKFSPNGEW-LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKT 106 (247)
Q Consensus 28 ~~v~~~~~s~~~~~-l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~ 106 (247)
++..++..+|.... ++ +.--.|+|++. .|.....+......+-.+.|+.+.. |++...+|.+++|++-... ...
T Consensus 44 gGpIAV~r~p~~~~~~~--~a~~~I~If~~-sG~lL~~~~w~~~~lI~mgWs~~ee-LI~v~k~g~v~Vy~~~ge~-ie~ 118 (829)
T KOG2280|consen 44 GGPIAVTRSPSKLVPLY--SARPYIRIFNI-SGQLLGRILWKHGELIGMGWSDDEE-LICVQKDGTVHVYGLLGEF-IES 118 (829)
T ss_pred CCceEEEeccccccccc--ccceeEEEEec-cccchHHHHhcCCCeeeecccCCce-EEEEeccceEEEeecchhh-hcc
Confidence 33445555553221 11 23345777776 3444444433444788899998766 5566789999999985322 211
Q ss_pred --E--ecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCC-C--CeEEEE-ECCC--CCEEEEec-CCC
Q psy4393 107 --L--KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHS-D--PVSAVH-FNRD--GSLIVSSS-YDG 175 (247)
Q Consensus 107 --~--~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~-~--~i~~~~-~~~~--~~~l~~~~-~dg 175 (247)
+ ......|..+.+..+|-.+.+ .+|.+.+..-.....+..++.-+ . +-+|-. +.|. ...++-.. ..+
T Consensus 119 ~svg~e~~~~~I~ec~~f~~GVavlt--~~g~v~~i~~~~~~~~~~~~diP~~~~~~~~Wt~~~~~~~~~~ll~v~~~v~ 196 (829)
T KOG2280|consen 119 NSVGFESQMSDIVECRFFHNGVAVLT--VSGQVILINGVEEPKLRKMPDIPYNELPKSCWTVFQPHRQSTILLDVDVAVG 196 (829)
T ss_pred cccccccccCceeEEEEecCceEEEe--cCCcEEEEcCCCcchhhhCCCCCCccCCCcceeEecCCCcceeEEeechhhh
Confidence 1 223344666666666544443 34544443322211122222111 0 111111 1121 11111111 011
Q ss_pred eEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcceEEEEc
Q psy4393 176 LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICS 235 (247)
Q Consensus 176 ~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 235 (247)
..++..................+..+..||+.++|+.-+.+|.|.+-+.+..+.+..++
T Consensus 197 -~~~~q~~~~~~q~~~~~~~~~~~~ki~VS~n~~~laLyt~~G~i~~vs~D~~~~lce~~ 255 (829)
T KOG2280|consen 197 -LHICQVEESRVQLHALSWPNSSVVKISVSPNRRFLALYTETGKIWVVSIDLSQILCEFN 255 (829)
T ss_pred -hcccceecccccccccCCCCceEEEEEEcCCcceEEEEecCCcEEEEecchhhhhhccC
Confidence 11111121111111122223567789999999999999999999999887776666555
No 393
>KOG4441|consensus
Probab=97.00 E-value=0.083 Score=45.71 Aligned_cols=189 Identities=15% Similarity=0.148 Sum_probs=96.8
Q ss_pred CCCEEEEEeCCC------eEEEEecCCCeEEEEEec-ccCCeEEEEECCCCCEEEEEcCC-C-----eEEEEECCCceEE
Q psy4393 38 NGEWLASSSADK------LIKIWGAYDGKFEKTISG-HKLGISDVAWSSDSRLLVSGSDD-K-----TLKIWELSSGKCL 104 (247)
Q Consensus 38 ~~~~l~~~~~dg------~v~iw~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d-~-----~i~v~d~~~~~~~ 104 (247)
.+.+++.|+.++ .+..||..++.......- ....-.+++.. ++...++|+.+ | .+..||..+.+..
T Consensus 284 ~~~l~~vGG~~~~~~~~~~ve~yd~~~~~w~~~a~m~~~r~~~~~~~~-~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~ 362 (571)
T KOG4441|consen 284 SGKLVAVGGYNRQGQSLRSVECYDPKTNEWSSLAPMPSPRCRVGVAVL-NGKLYVVGGYDSGSDRLSSVERYDPRTNQWT 362 (571)
T ss_pred CCeEEEECCCCCCCcccceeEEecCCcCcEeecCCCCcccccccEEEE-CCEEEEEccccCCCcccceEEEecCCCCcee
Confidence 345566666653 577788766543322111 11112233333 45677888888 3 5778888776532
Q ss_pred E--EEecCCccEEEEEEcCCCCEEEEeeCCCC-----EEEEECCCCeEEEeecCCCCCeEEEE-ECCCCCEEEEecCCC-
Q psy4393 105 K--TLKGHSNYVFCCNFNPQSNLIVSGSFDES-----VRIWDVRTGKCLKTLPAHSDPVSAVH-FNRDGSLIVSSSYDG- 175 (247)
Q Consensus 105 ~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-----i~v~d~~~~~~~~~~~~~~~~i~~~~-~~~~~~~l~~~~~dg- 175 (247)
. .+......... -.-+|.+.+.|+.||. +-.||..+.+-- ............. -.-+|.+.++|+.++
T Consensus 363 ~~a~M~~~R~~~~v--~~l~g~iYavGG~dg~~~l~svE~YDp~~~~W~-~va~m~~~r~~~gv~~~~g~iYi~GG~~~~ 439 (571)
T KOG4441|consen 363 PVAPMNTKRSDFGV--AVLDGKLYAVGGFDGEKSLNSVECYDPVTNKWT-PVAPMLTRRSGHGVAVLGGKLYIIGGGDGS 439 (571)
T ss_pred ccCCccCcccccee--EEECCEEEEEeccccccccccEEEecCCCCccc-ccCCCCcceeeeEEEEECCEEEEEcCcCCC
Confidence 2 11111111111 1225778888888874 667777654311 1111111111111 123677788888664
Q ss_pred -----eEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCC-----eEEEEECCCcceE
Q psy4393 176 -----LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN-----TLKLWDSKVVTPA 231 (247)
Q Consensus 176 -----~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg-----~i~vwd~~~~~~~ 231 (247)
.+..||..+++....-.......-..++ .-++...+.|+.|+ .|..||..+.+-.
T Consensus 440 ~~~l~sve~YDP~t~~W~~~~~M~~~R~~~g~a-~~~~~iYvvGG~~~~~~~~~VE~ydp~~~~W~ 504 (571)
T KOG4441|consen 440 SNCLNSVECYDPETNTWTLIAPMNTRRSGFGVA-VLNGKIYVVGGFDGTSALSSVERYDPETNQWT 504 (571)
T ss_pred ccccceEEEEcCCCCceeecCCcccccccceEE-EECCEEEEECCccCCCccceEEEEcCCCCcee
Confidence 5778888877643321111111111122 23566777777665 3788888765543
No 394
>KOG4441|consensus
Probab=97.00 E-value=0.071 Score=46.10 Aligned_cols=182 Identities=16% Similarity=0.227 Sum_probs=92.2
Q ss_pred CCEEEEEeCC-C-----eEEEEecCCCeEEEE--EecccCCeEEEEECCCCCEEEEEcCCC-----eEEEEECCCceEEE
Q psy4393 39 GEWLASSSAD-K-----LIKIWGAYDGKFEKT--ISGHKLGISDVAWSSDSRLLVSGSDDK-----TLKIWELSSGKCLK 105 (247)
Q Consensus 39 ~~~l~~~~~d-g-----~v~iw~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~v~d~~~~~~~~ 105 (247)
+...++|+.| | .+..||....+.... +........ ++ .-+|...++|+.|| .+..||..+.+...
T Consensus 333 ~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~~~a~M~~~R~~~~-v~-~l~g~iYavGG~dg~~~l~svE~YDp~~~~W~~ 410 (571)
T KOG4441|consen 333 GKLYVVGGYDSGSDRLSSVERYDPRTNQWTPVAPMNTKRSDFG-VA-VLDGKLYAVGGFDGEKSLNSVECYDPVTNKWTP 410 (571)
T ss_pred CEEEEEccccCCCcccceEEEecCCCCceeccCCccCccccce-eE-EECCEEEEEeccccccccccEEEecCCCCcccc
Confidence 4566778877 3 466777766553321 111111111 11 12577788888886 46778877654221
Q ss_pred --EEecCCccEEEEEEcCCCCEEEEeeCCC------CEEEEECCCCeE--EEeecCCCCCeEEEEECCCCCEEEEecCCC
Q psy4393 106 --TLKGHSNYVFCCNFNPQSNLIVSGSFDE------SVRIWDVRTGKC--LKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 175 (247)
Q Consensus 106 --~~~~~~~~v~~~~~~~~~~~l~~~~~d~------~i~v~d~~~~~~--~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg 175 (247)
.+......... ..-++.+.+.|+.++ .+..||..+++- +..+........ ++. -++.+++.|+.++
T Consensus 411 va~m~~~r~~~gv--~~~~g~iYi~GG~~~~~~~l~sve~YDP~t~~W~~~~~M~~~R~~~g-~a~-~~~~iYvvGG~~~ 486 (571)
T KOG4441|consen 411 VAPMLTRRSGHGV--AVLGGKLYIIGGGDGSSNCLNSVECYDPETNTWTLIAPMNTRRSGFG-VAV-LNGKIYVVGGFDG 486 (571)
T ss_pred cCCCCcceeeeEE--EEECCEEEEEcCcCCCccccceEEEEcCCCCceeecCCcccccccce-EEE-ECCEEEEECCccC
Confidence 11111111111 123467777887554 467788776542 222222122222 222 2567788888776
Q ss_pred -----eEEEEeCCCceeeeeeccC-CCCCeEEEEECCCCCEEEEEEcCC-----eEEEEECCCc
Q psy4393 176 -----LCRIWDTASGQCLKTLIDD-DNPPVSFVKFSPNGKYILAATLDN-----TLKLWDSKVV 228 (247)
Q Consensus 176 -----~i~v~d~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~dg-----~i~vwd~~~~ 228 (247)
.+..||..+.+....-... ....+... .-+++..+.|+.|| +|..||..+.
T Consensus 487 ~~~~~~VE~ydp~~~~W~~v~~m~~~rs~~g~~--~~~~~ly~vGG~~~~~~l~~ve~ydp~~d 548 (571)
T KOG4441|consen 487 TSALSSVERYDPETNQWTMVAPMTSPRSAVGVV--VLGGKLYAVGGFDGNNNLNTVECYDPETD 548 (571)
T ss_pred CCccceEEEEcCCCCceeEcccCccccccccEE--EECCEEEEEecccCccccceeEEcCCCCC
Confidence 3778888877654332111 11111112 22456667777665 5777776543
No 395
>KOG2079|consensus
Probab=96.96 E-value=0.0017 Score=57.65 Aligned_cols=78 Identities=18% Similarity=0.152 Sum_probs=59.3
Q ss_pred CCCEEEEecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcceEEEEccCCccc
Q psy4393 164 DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTPLNLN 241 (247)
Q Consensus 164 ~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~ 241 (247)
.+..++.|+..|++-..|....-.....-.....+|++++|+.+|+.++.|-.+|.|.+||...+.++..+.....|+
T Consensus 98 ~~~~ivi~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~ 175 (1206)
T KOG2079|consen 98 VVVPIVIGTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAPV 175 (1206)
T ss_pred eeeeEEEEcCchhhhhhhhhcccchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCCcc
Confidence 456788899999999988876421112223446789999999999999999999999999999887776655544443
No 396
>PHA02790 Kelch-like protein; Provisional
Probab=96.90 E-value=0.18 Score=42.83 Aligned_cols=180 Identities=9% Similarity=0.005 Sum_probs=82.4
Q ss_pred CCEEEEEeCCC-----eEEEEecCCCeEEEE--EecccCCeEEEEECCCCCEEEEEcCC--CeEEEEECCCceEEEEEec
Q psy4393 39 GEWLASSSADK-----LIKIWGAYDGKFEKT--ISGHKLGISDVAWSSDSRLLVSGSDD--KTLKIWELSSGKCLKTLKG 109 (247)
Q Consensus 39 ~~~l~~~~~dg-----~v~iw~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d--~~i~v~d~~~~~~~~~~~~ 109 (247)
+..+++|+.++ .+..||..+...... +.......... .-++...+.|+.+ ..+..||..+.+... +..
T Consensus 272 ~~lyviGG~~~~~~~~~v~~Ydp~~~~W~~~~~m~~~r~~~~~v--~~~~~iYviGG~~~~~sve~ydp~~n~W~~-~~~ 348 (480)
T PHA02790 272 EVVYLIGGWMNNEIHNNAIAVNYISNNWIPIPPMNSPRLYASGV--PANNKLYVVGGLPNPTSVERWFHGDAAWVN-MPS 348 (480)
T ss_pred CEEEEEcCCCCCCcCCeEEEEECCCCEEEECCCCCchhhcceEE--EECCEEEEECCcCCCCceEEEECCCCeEEE-CCC
Confidence 44556666543 466677665543221 11111111112 2356666777653 357778876554321 111
Q ss_pred CC-ccEEEEEEcCCCCEEEEeeCCC---CEEEEECCCCeEEE--eecCCCCCeEEEEECCCCCEEEEecCCCeEEEEeCC
Q psy4393 110 HS-NYVFCCNFNPQSNLIVSGSFDE---SVRIWDVRTGKCLK--TLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA 183 (247)
Q Consensus 110 ~~-~~v~~~~~~~~~~~l~~~~~d~---~i~v~d~~~~~~~~--~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~ 183 (247)
-. .........-++.+.+.|+.++ .+..||.++.+-.. .+....... +++ .-++.+.+.|+ .+.+||..
T Consensus 349 l~~~r~~~~~~~~~g~IYviGG~~~~~~~ve~ydp~~~~W~~~~~m~~~r~~~-~~~-~~~~~IYv~GG---~~e~ydp~ 423 (480)
T PHA02790 349 LLKPRCNPAVASINNVIYVIGGHSETDTTTEYLLPNHDQWQFGPSTYYPHYKS-CAL-VFGRRLFLVGR---NAEFYCES 423 (480)
T ss_pred CCCCCcccEEEEECCEEEEecCcCCCCccEEEEeCCCCEEEeCCCCCCccccc-eEE-EECCEEEEECC---ceEEecCC
Confidence 11 1111112223567777777553 46678877654211 111111111 121 23456556553 46789988
Q ss_pred CceeeeeeccCCCCCeEEEEECCCCCEEEEEEcC-----CeEEEEECCC
Q psy4393 184 SGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD-----NTLKLWDSKV 227 (247)
Q Consensus 184 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----g~i~vwd~~~ 227 (247)
+.+....-... ......-+..-+++..+.|+.+ ..+..||...
T Consensus 424 ~~~W~~~~~m~-~~r~~~~~~v~~~~IYviGG~~~~~~~~~ve~Yd~~~ 471 (480)
T PHA02790 424 SNTWTLIDDPI-YPRDNPELIIVDNKLLLIGGFYRGSYIDTIEVYNNRT 471 (480)
T ss_pred CCcEeEcCCCC-CCccccEEEEECCEEEEECCcCCCcccceEEEEECCC
Confidence 76543221111 1111111122356777777654 3566777654
No 397
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=96.88 E-value=0.17 Score=40.93 Aligned_cols=161 Identities=18% Similarity=0.174 Sum_probs=77.9
Q ss_pred ecCCCeEEEEEecccCCeEE-----EEECCCCCEEEEEcC-C--CeEEEEECCCceEEEEEecCCccEEEEEEcCCCCEE
Q psy4393 55 GAYDGKFEKTISGHKLGISD-----VAWSSDSRLLVSGSD-D--KTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLI 126 (247)
Q Consensus 55 ~~~~~~~~~~~~~~~~~v~~-----~~~~~~~~~l~~~~~-d--~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 126 (247)
|..+|..+..+......... =+|.++|+.|+-++. + ..+.+.|+.+++..+...+.........++|+.+.+
T Consensus 16 D~~TG~~VtrLT~~~~~~h~~YF~~~~ft~dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g~~~~g~~~s~~~~~~ 95 (386)
T PF14583_consen 16 DPDTGHRVTRLTPPDGHSHRLYFYQNCFTDDGRKLLFASDFDGNRNLYLLDLATGEITQLTDGPGDNTFGGFLSPDDRAL 95 (386)
T ss_dssp -TTT--EEEE-S-TTS-EE---TTS--B-TTS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS-B-TTT-EE-TTSSEE
T ss_pred CCCCCceEEEecCCCCcccceeecCCCcCCCCCEEEEEeccCCCcceEEEEcccCEEEECccCCCCCccceEEecCCCeE
Confidence 45566666666543332222 357788977665554 4 467788999887654333222222245677888888
Q ss_pred EEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEE--CCCCCEEEEec---CC-------------------CeEEEEeC
Q psy4393 127 VSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHF--NRDGSLIVSSS---YD-------------------GLCRIWDT 182 (247)
Q Consensus 127 ~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~--~~~~~~l~~~~---~d-------------------g~i~v~d~ 182 (247)
+....+..|.-.|+++.+................| +.++..++-.- .+ ..|.-.|+
T Consensus 96 ~Yv~~~~~l~~vdL~T~e~~~vy~~p~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl 175 (386)
T PF14583_consen 96 YYVKNGRSLRRVDLDTLEERVVYEVPDDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDL 175 (386)
T ss_dssp EEEETTTEEEEEETTT--EEEEEE--TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEET
T ss_pred EEEECCCeEEEEECCcCcEEEEEECCcccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEEC
Confidence 77766778999999988764444444444433344 44566543321 11 13455577
Q ss_pred CCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcC
Q psy4393 183 ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD 217 (247)
Q Consensus 183 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d 217 (247)
.+++....+. ...-+..+.|+|....++.-+.+
T Consensus 176 ~tG~~~~v~~--~~~wlgH~~fsP~dp~li~fCHE 208 (386)
T PF14583_consen 176 KTGERKVVFE--DTDWLGHVQFSPTDPTLIMFCHE 208 (386)
T ss_dssp TT--EEEEEE--ESS-EEEEEEETTEEEEEEEEE-
T ss_pred CCCceeEEEe--cCccccCcccCCCCCCEEEEecc
Confidence 7776443332 23346678899876666554433
No 398
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=96.85 E-value=0.092 Score=44.43 Aligned_cols=152 Identities=13% Similarity=0.221 Sum_probs=84.7
Q ss_pred CCeEEEEECCCCCEEEEEc--CCCeEEEEECCCceEEEEEecCCccEEEEEEcCCC----CEEEEeeCCCCEEEEECCCC
Q psy4393 70 LGISDVAWSSDSRLLVSGS--DDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQS----NLIVSGSFDESVRIWDVRTG 143 (247)
Q Consensus 70 ~~v~~~~~~~~~~~l~~~~--~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~----~~l~~~~~d~~i~v~d~~~~ 143 (247)
.++..++|....+.+++.- .+|.+++=|. .. -+.-..|..+.|.|-+ ..+.+.-...+|.+|.+...
T Consensus 20 HPvhGlaWTDGkqVvLT~L~l~~gE~kfGds---~v----iGqFEhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~s 92 (671)
T PF15390_consen 20 HPVHGLAWTDGKQVVLTDLQLHNGEPKFGDS---KV----IGQFEHVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCPS 92 (671)
T ss_pred ccccceEecCCCEEEEEeeeeeCCccccCCc---cE----eeccceeeeeeecCcccCCCCceEEEeccceEEEEEeccC
Confidence 4688899974333344432 2333332221 12 2333458889998842 23444456678999988521
Q ss_pred -----eEEE----eecCCCCCe--EEEEECCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEE
Q psy4393 144 -----KCLK----TLPAHSDPV--SAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYIL 212 (247)
Q Consensus 144 -----~~~~----~~~~~~~~i--~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 212 (247)
+.+. ++.. .-++ ....|+|....|++=+....-.+++++........-....+.|.|.+|.+||+.|+
T Consensus 93 ~~e~~K~l~sQtcEi~e-~~pvLpQGCVWHPk~~iL~VLT~~dvSV~~sV~~d~srVkaDi~~~G~IhCACWT~DG~RLV 171 (671)
T PF15390_consen 93 TTERNKLLMSQTCEIRE-PFPVLPQGCVWHPKKAILTVLTARDVSVLPSVHCDSSRVKADIKTSGLIHCACWTKDGQRLV 171 (671)
T ss_pred ccccccceeeeeeeccC-CcccCCCcccccCCCceEEEEecCceeEeeeeeeCCceEEEeccCCceEEEEEecCcCCEEE
Confidence 1111 1110 1111 23469999888876555544445555432211111124456799999999999887
Q ss_pred EEE-cCCeEEEEECCCcc
Q psy4393 213 AAT-LDNTLKLWDSKVVT 229 (247)
Q Consensus 213 ~~~-~dg~i~vwd~~~~~ 229 (247)
.+- ..=.-++||..+++
T Consensus 172 VAvGSsLHSyiWd~~qKt 189 (671)
T PF15390_consen 172 VAVGSSLHSYIWDSAQKT 189 (671)
T ss_pred EEeCCeEEEEEecCchhh
Confidence 664 33467899976553
No 399
>KOG2444|consensus
Probab=96.84 E-value=0.0064 Score=44.87 Aligned_cols=105 Identities=14% Similarity=0.209 Sum_probs=65.0
Q ss_pred CCCEEEEEcCCCeEEEEECCCceEEEE-EecCCccEEE-EEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCC-CCe
Q psy4393 80 DSRLLVSGSDDKTLKIWELSSGKCLKT-LKGHSNYVFC-CNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHS-DPV 156 (247)
Q Consensus 80 ~~~~l~~~~~d~~i~v~d~~~~~~~~~-~~~~~~~v~~-~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~-~~i 156 (247)
-+..+++|+.+|.|.+|+......... .......+.+ +.-..++.+..+++.+|.++.|++...+.+-....|. .+.
T Consensus 69 ~~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~ 148 (238)
T KOG2444|consen 69 ASAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFESG 148 (238)
T ss_pred cCceEEeecccceEEEecCCccchHHHhhhcccccceeccccccccceeEEeccCCceeeeccccCceeeeeccccCCCc
Confidence 346788999999999998763211111 1111122222 2233455688889999999999998877666655555 444
Q ss_pred EEEEECCCCCEEEEe--cCCCeEEEEeCCC
Q psy4393 157 SAVHFNRDGSLIVSS--SYDGLCRIWDTAS 184 (247)
Q Consensus 157 ~~~~~~~~~~~l~~~--~~dg~i~v~d~~~ 184 (247)
........+++++.+ +.+..++.|++..
T Consensus 149 e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~ 178 (238)
T KOG2444|consen 149 EELIVVGSDEFLKIADTSHDRVLKKWNVEK 178 (238)
T ss_pred ceeEEecCCceEEeeccccchhhhhcchhh
Confidence 545555555666655 6666666776653
No 400
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=96.82 E-value=0.047 Score=44.87 Aligned_cols=94 Identities=14% Similarity=0.247 Sum_probs=67.0
Q ss_pred CceEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCC-eEEEEECCC-C------------
Q psy4393 16 NYVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSD-S------------ 81 (247)
Q Consensus 16 ~~~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~-v~~~~~~~~-~------------ 81 (247)
+....+.+.+....+.++..+|++++.|+...-|.|.++|...+.....+++.... +.-+..... .
T Consensus 296 ~l~~r~~l~D~~R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRdAqc~wi~~~~~~~~~~~~~~~~~~~ 375 (415)
T PF14655_consen 296 PLPMRFGLPDSKREGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRDAQCGWIEVPEEGDRDRSNSNSPKSS 375 (415)
T ss_pred ccceEEeeccCCceEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhccCccceEEEEEeecccccccccccccCCC
Confidence 34566778888889999999999998888877899999999888777777665433 211111111 1
Q ss_pred ----C-EEEEEcCCCeEEEEECCCceEEEEEec
Q psy4393 82 ----R-LLVSGSDDKTLKIWELSSGKCLKTLKG 109 (247)
Q Consensus 82 ----~-~l~~~~~d~~i~v~d~~~~~~~~~~~~ 109 (247)
. +++-+..-|.|.+|.++++..+..+..
T Consensus 376 ~~~~l~LvIyaprRg~lEvW~~~~g~Rv~a~~v 408 (415)
T PF14655_consen 376 SRFALFLVIYAPRRGILEVWSMRQGPRVAAFNV 408 (415)
T ss_pred CcceEEEEEEeccCCeEEEEecCCCCEEEEEEe
Confidence 1 234566788999999998887766543
No 401
>PHA02713 hypothetical protein; Provisional
Probab=96.80 E-value=0.029 Score=48.36 Aligned_cols=95 Identities=6% Similarity=0.093 Sum_probs=48.9
Q ss_pred eEEEEECCCceEEEEEecCCccEEEEEEcCCCCEEEEeeCCC------CEEEEECCC-Ce--EEEeecCCCCCeEEEEEC
Q psy4393 92 TLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE------SVRIWDVRT-GK--CLKTLPAHSDPVSAVHFN 162 (247)
Q Consensus 92 ~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~------~i~v~d~~~-~~--~~~~~~~~~~~i~~~~~~ 162 (247)
.+..||..+.+....-.-...........-++.+.+.|+.++ .+..||..+ .+ .+..+.........+.+
T Consensus 433 ~ve~YDP~td~W~~v~~m~~~r~~~~~~~~~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r~~~~~~~~- 511 (557)
T PHA02713 433 KVIRYDTVNNIWETLPNFWTGTIRPGVVSHKDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRLSALHTILH- 511 (557)
T ss_pred eEEEECCCCCeEeecCCCCcccccCcEEEECCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCcccccceeEEE-
Confidence 466788776543211110011111111223456667776542 356788876 33 23333322222222233
Q ss_pred CCCCEEEEecCCC--eEEEEeCCCceee
Q psy4393 163 RDGSLIVSSSYDG--LCRIWDTASGQCL 188 (247)
Q Consensus 163 ~~~~~l~~~~~dg--~i~v~d~~~~~~~ 188 (247)
++++.++|+.+| .+..||..+.+..
T Consensus 512 -~~~iyv~Gg~~~~~~~e~yd~~~~~W~ 538 (557)
T PHA02713 512 -DNTIMMLHCYESYMLQDTFNVYTYEWN 538 (557)
T ss_pred -CCEEEEEeeecceeehhhcCccccccc
Confidence 678888999888 6777887776543
No 402
>PRK10115 protease 2; Provisional
Probab=96.73 E-value=0.39 Score=42.70 Aligned_cols=193 Identities=10% Similarity=0.082 Sum_probs=96.5
Q ss_pred CeEEEEECCCCCEEEEEeC-C----CeEEEEecCCCeEEE-EEecccCCeEEEEECCCCCEEEEEcCC------CeEEEE
Q psy4393 29 AVSSVKFSPNGEWLASSSA-D----KLIKIWGAYDGKFEK-TISGHKLGISDVAWSSDSRLLVSGSDD------KTLKIW 96 (247)
Q Consensus 29 ~v~~~~~s~~~~~l~~~~~-d----g~v~iw~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~v~ 96 (247)
.+..+.++|||++|+.+.. + ..+++.|+.++.... .+... . ..++|.+|++.|+....+ ..+..+
T Consensus 128 ~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~~--~-~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h 204 (686)
T PRK10115 128 TLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNV--E-PSFVWANDSWTFYYVRKHPVTLLPYQVWRH 204 (686)
T ss_pred EEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccCc--c-eEEEEeeCCCEEEEEEecCCCCCCCEEEEE
Confidence 4677889999998876432 2 357788887665321 12211 1 458999998877655332 367788
Q ss_pred ECCCc--eEEEEEecCCccEE-EEEEcCCCCEEEEeeC---CCCEEEEECC--CCeEEEeecCCCCCeEEEEECCCCCEE
Q psy4393 97 ELSSG--KCLKTLKGHSNYVF-CCNFNPQSNLIVSGSF---DESVRIWDVR--TGKCLKTLPAHSDPVSAVHFNRDGSLI 168 (247)
Q Consensus 97 d~~~~--~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~---d~~i~v~d~~--~~~~~~~~~~~~~~i~~~~~~~~~~~l 168 (247)
++.++ +....+........ ....+.++..++..+. ++.+.+++.. .+.....+....+....+. +..+.++
T Consensus 205 ~lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ly 283 (686)
T PRK10115 205 TIGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDAELADAEPFVFLPRRKDHEYSLD-HYQHRFY 283 (686)
T ss_pred ECCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEECcCCCCCceEEEECCCCCEEEEE-eCCCEEE
Confidence 88877 33333443333232 2333446776554433 3568888843 3332222222222222222 2233333
Q ss_pred EEecCC---CeEEEEeCCCceeeeeeccC-CCCCeEEEEECCCCCEEEEEEcCCe--EEEEECC
Q psy4393 169 VSSSYD---GLCRIWDTASGQCLKTLIDD-DNPPVSFVKFSPNGKYILAATLDNT--LKLWDSK 226 (247)
Q Consensus 169 ~~~~~d---g~i~v~d~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~dg~--i~vwd~~ 226 (247)
+....+ ..+...++........+... ....+..+.+.. +.++++...+|. +.++|..
T Consensus 284 ~~tn~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~-~~l~~~~~~~g~~~l~~~~~~ 346 (686)
T PRK10115 284 LRSNRHGKNFGLYRTRVRDEQQWEELIPPRENIMLEGFTLFT-DWLVVEERQRGLTSLRQINRK 346 (686)
T ss_pred EEEcCCCCCceEEEecCCCcccCeEEECCCCCCEEEEEEEEC-CEEEEEEEeCCEEEEEEEcCC
Confidence 333222 23444455421122333333 234566677762 234444555664 4555543
No 403
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=96.71 E-value=0.19 Score=39.02 Aligned_cols=148 Identities=20% Similarity=0.205 Sum_probs=84.1
Q ss_pred CCCCEEEEEcCCCeEEEEECCCceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEee---------
Q psy4393 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTL--------- 149 (247)
Q Consensus 79 ~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~--------- 149 (247)
..++.|+.|+.+| +.+++.........+. +...|..+...|+-+.++.-+ |+.++++++..-......
T Consensus 5 ~~~~~L~vGt~~G-l~~~~~~~~~~~~~i~-~~~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l~~~~~~~~~~~~~~~ 81 (275)
T PF00780_consen 5 SWGDRLLVGTEDG-LYVYDLSDPSKPTRIL-KLSSITQLSVLPELNLLLVLS-DGQLYVYDLDSLEPVSTSAPLAFPKSR 81 (275)
T ss_pred cCCCEEEEEECCC-EEEEEecCCccceeEe-ecceEEEEEEecccCEEEEEc-CCccEEEEchhhccccccccccccccc
Confidence 3578899998888 8889983332222222 223388888888777766654 599999998754332210
Q ss_pred -----cCCCCCeEEEE--ECCCCCEEEEecCCCeEEEEeCCCc-----eeeeeeccCCCCCeEEEEECCCCCEEEEEEcC
Q psy4393 150 -----PAHSDPVSAVH--FNRDGSLIVSSSYDGLCRIWDTASG-----QCLKTLIDDDNPPVSFVKFSPNGKYILAATLD 217 (247)
Q Consensus 150 -----~~~~~~i~~~~--~~~~~~~l~~~~~dg~i~v~d~~~~-----~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d 217 (247)
......+...+ -...+...++......+.+|..... +..+.+... ..+..++|. ++.++.|..
T Consensus 82 ~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~~~~ke~~lp--~~~~~i~~~--~~~i~v~~~- 156 (275)
T PF00780_consen 82 SLPTKLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRNSFSKLLKEISLP--DPPSSIAFL--GNKICVGTS- 156 (275)
T ss_pred cccccccccCCeeEEeeccccccceEEEEEECCEEEEEEEECCcccccceeEEEEcC--CCcEEEEEe--CCEEEEEeC-
Confidence 01112333333 1123333333444557887765542 233443333 345677887 456777764
Q ss_pred CeEEEEECCCcceEEEE
Q psy4393 218 NTLKLWDSKVVTPAIIC 234 (247)
Q Consensus 218 g~i~vwd~~~~~~~~~~ 234 (247)
+...+.|..+..+.-+.
T Consensus 157 ~~f~~idl~~~~~~~l~ 173 (275)
T PF00780_consen 157 KGFYLIDLNTGSPSELL 173 (275)
T ss_pred CceEEEecCCCCceEEe
Confidence 45778888766554443
No 404
>COG4257 Vgb Streptogramin lyase [Defense mechanisms]
Probab=96.70 E-value=0.18 Score=38.66 Aligned_cols=205 Identities=15% Similarity=0.152 Sum_probs=125.6
Q ss_pred CCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceEEE-E
Q psy4393 28 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLK-T 106 (247)
Q Consensus 28 ~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~-~ 106 (247)
..-..++-+|||..-+++...|.+--.|..+++....--+....-..+..-|||..-++-+.. .|.-.|.++.+..+ .
T Consensus 62 ~ap~dvapapdG~VWft~qg~gaiGhLdP~tGev~~ypLg~Ga~Phgiv~gpdg~~Witd~~~-aI~R~dpkt~evt~f~ 140 (353)
T COG4257 62 SAPFDVAPAPDGAVWFTAQGTGAIGHLDPATGEVETYPLGSGASPHGIVVGPDGSAWITDTGL-AIGRLDPKTLEVTRFP 140 (353)
T ss_pred CCccccccCCCCceEEecCccccceecCCCCCceEEEecCCCCCCceEEECCCCCeeEecCcc-eeEEecCcccceEEee
Confidence 344567778888877777777777777777777766555555566778889999877765544 55556776654322 1
Q ss_pred --EecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCC-CCCeEEEEECCCCCEEEEecCCCeEEEEeCC
Q psy4393 107 --LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAH-SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA 183 (247)
Q Consensus 107 --~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~ 183 (247)
.+..........|++.|++.+++... .---.|...+ .++.+... ...-..|+..|+|...++.-.+..|-..|..
T Consensus 141 lp~~~a~~nlet~vfD~~G~lWFt~q~G-~yGrLdPa~~-~i~vfpaPqG~gpyGi~atpdGsvwyaslagnaiaridp~ 218 (353)
T COG4257 141 LPLEHADANLETAVFDPWGNLWFTGQIG-AYGRLDPARN-VISVFPAPQGGGPYGICATPDGSVWYASLAGNAIARIDPF 218 (353)
T ss_pred cccccCCCcccceeeCCCccEEEeeccc-cceecCcccC-ceeeeccCCCCCCcceEECCCCcEEEEeccccceEEcccc
Confidence 12223446677899999999887532 1111121111 22333222 2234668899999988887777777777877
Q ss_pred CceeeeeeccCC--CCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcceEEEEccC
Q psy4393 184 SGQCLKTLIDDD--NPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTP 237 (247)
Q Consensus 184 ~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~ 237 (247)
.+... .+.... ...-..+--+|.|+.-++....+.+..||..+.. -.++..|
T Consensus 219 ~~~ae-v~p~P~~~~~gsRriwsdpig~~wittwg~g~l~rfdPs~~s-W~eypLP 272 (353)
T COG4257 219 AGHAE-VVPQPNALKAGSRRIWSDPIGRAWITTWGTGSLHRFDPSVTS-WIEYPLP 272 (353)
T ss_pred cCCcc-eecCCCcccccccccccCccCcEEEeccCCceeeEeCccccc-ceeeeCC
Confidence 66322 121111 2223445567888877777777888888877654 3344444
No 405
>KOG3630|consensus
Probab=96.61 E-value=0.052 Score=49.20 Aligned_cols=142 Identities=14% Similarity=0.146 Sum_probs=84.8
Q ss_pred CCeEEEEECCCCCEEEE--EcCCCeEEEEECCCceE-----EEEEe------cCCccEEEEEEcCCCCE-EEEeeCCCCE
Q psy4393 70 LGISDVAWSSDSRLLVS--GSDDKTLKIWELSSGKC-----LKTLK------GHSNYVFCCNFNPQSNL-IVSGSFDESV 135 (247)
Q Consensus 70 ~~v~~~~~~~~~~~l~~--~~~d~~i~v~d~~~~~~-----~~~~~------~~~~~v~~~~~~~~~~~-l~~~~~d~~i 135 (247)
.++..+...+|+...++ .+.+-.|..||+++-.. ...+. .......++.|+|.-.. .+....|+.|
T Consensus 101 ~pi~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl 180 (1405)
T KOG3630|consen 101 IPIVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSL 180 (1405)
T ss_pred ccceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccch
Confidence 34556666777655433 33344788899875321 11111 12233557788885432 3455678888
Q ss_pred EEEECCCCeE-EEeecCCCCCeEEEEECCCCCEEEEecCCCeEEEEeCCCceeeeee---ccCCCCCeEEEEECCCCCEE
Q psy4393 136 RIWDVRTGKC-LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL---IDDDNPPVSFVKFSPNGKYI 211 (247)
Q Consensus 136 ~v~d~~~~~~-~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~---~~~~~~~v~~~~~s~~~~~l 211 (247)
++.-+..... ...+ ......++++|+|.|+.++.|-..|.+.-|-..- +....+ ...+...|.++.|-....+|
T Consensus 181 ~V~~~~~~~~~v~s~-p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~l-eik~~ip~Pp~~e~yrvl~v~Wl~t~efl 258 (1405)
T KOG3630|consen 181 RVKSTKQLAQNVTSF-PVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPSL-EIKSEIPEPPVEENYRVLSVTWLSTQEFL 258 (1405)
T ss_pred hhhhhhhhhhhhccc-CcccceeeEEeccccceeeEecCCCeEEEeeccc-ceeecccCCCcCCCcceeEEEEecceeEE
Confidence 8776543221 1122 2245679999999999999999999988875432 222222 12224568888887777776
Q ss_pred EE
Q psy4393 212 LA 213 (247)
Q Consensus 212 ~~ 213 (247)
+.
T Consensus 259 vv 260 (1405)
T KOG3630|consen 259 VV 260 (1405)
T ss_pred EE
Confidence 65
No 406
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=96.58 E-value=0.31 Score=39.78 Aligned_cols=142 Identities=12% Similarity=0.144 Sum_probs=76.4
Q ss_pred CCeEEEEECCCCCEEEEEe-----------CCC-eEEEEecCC--CeE--EEEEecccCCeEEEEECCCCCEEEEEcCCC
Q psy4393 28 KAVSSVKFSPNGEWLASSS-----------ADK-LIKIWGAYD--GKF--EKTISGHKLGISDVAWSSDSRLLVSGSDDK 91 (247)
Q Consensus 28 ~~v~~~~~s~~~~~l~~~~-----------~dg-~v~iw~~~~--~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 91 (247)
.....++|.++|+++++-. ..+ .|.+++-.+ ++. ...+.........+++.+++ .++ +....
T Consensus 14 ~~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~~G-lyV-~~~~~ 91 (367)
T TIGR02604 14 RNPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAVGG-VYV-ATPPD 91 (367)
T ss_pred CCCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEecCC-EEE-eCCCe
Confidence 4567889999999877642 223 676665432 332 22333333345788898888 444 44444
Q ss_pred eEEEEECCCc-----eEE---EEEecC----CccEEEEEEcCCCCEEEEeeCC-------------------CCEEEEEC
Q psy4393 92 TLKIWELSSG-----KCL---KTLKGH----SNYVFCCNFNPQSNLIVSGSFD-------------------ESVRIWDV 140 (247)
Q Consensus 92 ~i~v~d~~~~-----~~~---~~~~~~----~~~v~~~~~~~~~~~l~~~~~d-------------------~~i~v~d~ 140 (247)
..++.|.... +.. ..+... ......+.|.|+|.+.++-+.. +.+.-+|.
T Consensus 92 i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G~~~~~~~~~~~~~~~~~~~~~g~i~r~~p 171 (367)
T TIGR02604 92 ILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHGNTLASKVTRPGTSDESRQGLGGGLFRYNP 171 (367)
T ss_pred EEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecccCCCceeccCCCccCcccccCceEEEEec
Confidence 3344454321 111 112111 2235678899999876654421 33444555
Q ss_pred CCCeEEEeecCCCCCeEEEEECCCCCEEEEec
Q psy4393 141 RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSS 172 (247)
Q Consensus 141 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 172 (247)
..++. ..+...-.....++|+|+|+++++-.
T Consensus 172 dg~~~-e~~a~G~rnp~Gl~~d~~G~l~~tdn 202 (367)
T TIGR02604 172 DGGKL-RVVAHGFQNPYGHSVDSWGDVFFCDN 202 (367)
T ss_pred CCCeE-EEEecCcCCCccceECCCCCEEEEcc
Confidence 44332 22222222245789999998877644
No 407
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=96.58 E-value=0.23 Score=38.23 Aligned_cols=144 Identities=17% Similarity=0.221 Sum_probs=86.2
Q ss_pred CeEEEEECCCCCEEEEEe---CCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEE-CCCceEE
Q psy4393 29 AVSSVKFSPNGEWLASSS---ADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWE-LSSGKCL 104 (247)
Q Consensus 29 ~v~~~~~s~~~~~l~~~~---~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d-~~~~~~~ 104 (247)
.+.+.+++++++.++... ....+.++.. +....... ....+....|++++...+....+...+++. ..++...
T Consensus 25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~--~~~~~~~~-~g~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~~~ 101 (253)
T PF10647_consen 25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPA--GGPVRPVL-TGGSLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGTGE 101 (253)
T ss_pred cccceEECCCCCeEEEEEEcCCCCEEEEEcC--CCcceeec-cCCccccccccCCCCEEEEEcCCCceEEEEecCCCcce
Confidence 688999999999887654 2234444433 22222221 223677889999988777666666666663 2333221
Q ss_pred -EEEecC--CccEEEEEEcCCCCEEEEee---CCCCEEEEECC---CC--e----EEEeecCCCCCeEEEEECCCCCEEE
Q psy4393 105 -KTLKGH--SNYVFCCNFNPQSNLIVSGS---FDESVRIWDVR---TG--K----CLKTLPAHSDPVSAVHFNRDGSLIV 169 (247)
Q Consensus 105 -~~~~~~--~~~v~~~~~~~~~~~l~~~~---~d~~i~v~d~~---~~--~----~~~~~~~~~~~i~~~~~~~~~~~l~ 169 (247)
..+... ...|..+.++|||..++... .++.|.+--+. .+ . ...........+..+.|.+++.+++
T Consensus 102 ~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~~~~L~V 181 (253)
T PF10647_consen 102 PVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTDVAWSDDSTLVV 181 (253)
T ss_pred eEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccCcceeeeecCCCEEEE
Confidence 112211 12799999999999887765 34566655432 22 1 1111222245788999999998777
Q ss_pred EecCCC
Q psy4393 170 SSSYDG 175 (247)
Q Consensus 170 ~~~~dg 175 (247)
.+...+
T Consensus 182 ~~~~~~ 187 (253)
T PF10647_consen 182 LGRSAG 187 (253)
T ss_pred EeCCCC
Confidence 665544
No 408
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=96.57 E-value=0.32 Score=39.74 Aligned_cols=140 Identities=13% Similarity=0.126 Sum_probs=75.5
Q ss_pred CeEEEEECCCCCEEEEEc-----------CCC-eEEEEECCC--ce--EEEEEecCCccEEEEEEcCCCCEEEEeeCCCC
Q psy4393 71 GISDVAWSSDSRLLVSGS-----------DDK-TLKIWELSS--GK--CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 134 (247)
Q Consensus 71 ~v~~~~~~~~~~~l~~~~-----------~d~-~i~v~d~~~--~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 134 (247)
....++|.++|+++++.. ..+ .|.+++-.+ ++ ....+.........+.+.+++ ++++ ... .
T Consensus 15 ~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~~G-lyV~-~~~-~ 91 (367)
T TIGR02604 15 NPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAVGG-VYVA-TPP-D 91 (367)
T ss_pred CCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEecCC-EEEe-CCC-e
Confidence 356788999998777653 223 676665433 22 223333333345678888888 4443 333 3
Q ss_pred EEEE-ECCCC-----e--EE-EeecCC----CCCeEEEEECCCCCEEEEecCC-------------------CeEEEEeC
Q psy4393 135 VRIW-DVRTG-----K--CL-KTLPAH----SDPVSAVHFNRDGSLIVSSSYD-------------------GLCRIWDT 182 (247)
Q Consensus 135 i~v~-d~~~~-----~--~~-~~~~~~----~~~i~~~~~~~~~~~l~~~~~d-------------------g~i~v~d~ 182 (247)
|..+ |.... + .+ ..+... ......+++.|||.+.++-+.. |.+.-+|.
T Consensus 92 i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G~~~~~~~~~~~~~~~~~~~~~g~i~r~~p 171 (367)
T TIGR02604 92 ILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHGNTLASKVTRPGTSDESRQGLGGGLFRYNP 171 (367)
T ss_pred EEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecccCCCceeccCCCccCcccccCceEEEEec
Confidence 4434 44211 1 11 122221 2346778999999876654421 34555555
Q ss_pred CCceeeeeeccCCCCCeEEEEECCCCCEEEEEE
Q psy4393 183 ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT 215 (247)
Q Consensus 183 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 215 (247)
.+++. ..+... ......++|+|+|+++++-.
T Consensus 172 dg~~~-e~~a~G-~rnp~Gl~~d~~G~l~~tdn 202 (367)
T TIGR02604 172 DGGKL-RVVAHG-FQNPYGHSVDSWGDVFFCDN 202 (367)
T ss_pred CCCeE-EEEecC-cCCCccceECCCCCEEEEcc
Confidence 54432 222222 22235689999998876544
No 409
>PRK13684 Ycf48-like protein; Provisional
Probab=96.46 E-value=0.35 Score=38.94 Aligned_cols=149 Identities=11% Similarity=0.124 Sum_probs=81.3
Q ss_pred CCeEEEEECCCCCEEEEEeCCCeEEE-EecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceEEEE
Q psy4393 28 KAVSSVKFSPNGEWLASSSADKLIKI-WGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKT 106 (247)
Q Consensus 28 ~~v~~~~~s~~~~~l~~~~~dg~v~i-w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~ 106 (247)
+.+.++.+.|++.+++++ ..|.+.. ++................+.++.+.++++.++++ ..|.+.+=....+.....
T Consensus 173 g~~~~i~~~~~g~~v~~g-~~G~i~~s~~~gg~tW~~~~~~~~~~l~~i~~~~~g~~~~vg-~~G~~~~~s~d~G~sW~~ 250 (334)
T PRK13684 173 GVVRNLRRSPDGKYVAVS-SRGNFYSTWEPGQTAWTPHQRNSSRRLQSMGFQPDGNLWMLA-RGGQIRFNDPDDLESWSK 250 (334)
T ss_pred ceEEEEEECCCCeEEEEe-CCceEEEEcCCCCCeEEEeeCCCcccceeeeEcCCCCEEEEe-cCCEEEEccCCCCCcccc
Confidence 457888899988776654 4554432 2211112222333345568899999998876665 567664323344433222
Q ss_pred Eec----CCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeec---CCCCCeEEEEECCCCCEEEEecCCCeEEE
Q psy4393 107 LKG----HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLP---AHSDPVSAVHFNRDGSLIVSSSYDGLCRI 179 (247)
Q Consensus 107 ~~~----~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~---~~~~~i~~~~~~~~~~~l~~~~~dg~i~v 179 (247)
... ....+..+.+.+++..++.+ .+|.+. .....++...... .-......+.+..+++.+++ +..|.|..
T Consensus 251 ~~~~~~~~~~~l~~v~~~~~~~~~~~G-~~G~v~-~S~d~G~tW~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~~G~il~ 327 (334)
T PRK13684 251 PIIPEITNGYGYLDLAYRTPGEIWAGG-GNGTLL-VSKDGGKTWEKDPVGEEVPSNFYKIVFLDPEKGFVL-GQRGVLLR 327 (334)
T ss_pred ccCCccccccceeeEEEcCCCCEEEEc-CCCeEE-EeCCCCCCCeECCcCCCCCcceEEEEEeCCCceEEE-CCCceEEE
Confidence 211 12236677888877766654 456543 3333344333322 11234666777666666554 45777766
Q ss_pred Ee
Q psy4393 180 WD 181 (247)
Q Consensus 180 ~d 181 (247)
++
T Consensus 328 ~~ 329 (334)
T PRK13684 328 YV 329 (334)
T ss_pred ec
Confidence 65
No 410
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=96.39 E-value=0.25 Score=41.26 Aligned_cols=142 Identities=15% Similarity=0.216 Sum_probs=84.2
Q ss_pred CCCCEEE-EEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCC--------CCEEEEEcCCCeEEEEECCC-ceEEEE
Q psy4393 37 PNGEWLA-SSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD--------SRLLVSGSDDKTLKIWELSS-GKCLKT 106 (247)
Q Consensus 37 ~~~~~l~-~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~--------~~~l~~~~~d~~i~v~d~~~-~~~~~~ 106 (247)
.+..+|+ .++....++-.|++.|+.+.....+..- -+.+.|+ .+.|+-.+..+..+ .|.+- |..+..
T Consensus 477 ~dssli~~dg~~~~kLykmDIErGkvveeW~~~ddv--vVqy~p~~kf~qmt~eqtlvGlS~~svFr-IDPR~~gNKi~v 553 (776)
T COG5167 477 NDSSLIYLDGGERDKLYKMDIERGKVVEEWDLKDDV--VVQYNPYFKFQQMTDEQTLVGLSDYSVFR-IDPRARGNKIKV 553 (776)
T ss_pred CCcceEEecCCCcccceeeecccceeeeEeecCCcc--eeecCCchhHHhcCccceEEeecccceEE-ecccccCCceee
Confidence 3444444 3555667777888888888877766544 3556664 23455555444443 45442 222211
Q ss_pred EecCCccEEEEEE----cCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCCCeEEEEeC
Q psy4393 107 LKGHSNYVFCCNF----NPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 182 (247)
Q Consensus 107 ~~~~~~~v~~~~~----~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~ 182 (247)
. .....+..-.| .....++|.++..|-|++||--.-+....+++-...|..+..+.+|+++++.+ ...+.+.|+
T Consensus 554 ~-esKdY~tKn~Fss~~tTesGyIa~as~kGDirLyDRig~rAKtalP~lG~aIk~idvta~Gk~ilaTC-k~yllL~d~ 631 (776)
T COG5167 554 V-ESKDYKTKNKFSSGMTTESGYIAAASRKGDIRLYDRIGKRAKTALPGLGDAIKHIDVTANGKHILATC-KNYLLLTDV 631 (776)
T ss_pred e-eehhccccccccccccccCceEEEecCCCceeeehhhcchhhhcCcccccceeeeEeecCCcEEEEee-cceEEEEec
Confidence 1 11112222222 23456899999999999999543333344555566788889999999887665 445666665
Q ss_pred C
Q psy4393 183 A 183 (247)
Q Consensus 183 ~ 183 (247)
+
T Consensus 632 ~ 632 (776)
T COG5167 632 P 632 (776)
T ss_pred c
Confidence 4
No 411
>PRK13684 Ycf48-like protein; Provisional
Probab=96.38 E-value=0.39 Score=38.65 Aligned_cols=152 Identities=11% Similarity=0.104 Sum_probs=82.1
Q ss_pred cCCeEEEEECCCCCEEEEEcCCCeEEE-EECCCceEEEEE-ecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEE
Q psy4393 69 KLGISDVAWSSDSRLLVSGSDDKTLKI-WELSSGKCLKTL-KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCL 146 (247)
Q Consensus 69 ~~~v~~~~~~~~~~~l~~~~~d~~i~v-~d~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~ 146 (247)
...+.++.+.|++..++++ ..|.+.. ++ ..++....+ ......+..+.+.+++..++.+ ..|.+.+=....+..-
T Consensus 172 ~g~~~~i~~~~~g~~v~~g-~~G~i~~s~~-~gg~tW~~~~~~~~~~l~~i~~~~~g~~~~vg-~~G~~~~~s~d~G~sW 248 (334)
T PRK13684 172 AGVVRNLRRSPDGKYVAVS-SRGNFYSTWE-PGQTAWTPHQRNSSRRLQSMGFQPDGNLWMLA-RGGQIRFNDPDDLESW 248 (334)
T ss_pred cceEEEEEECCCCeEEEEe-CCceEEEEcC-CCCCeEEEeeCCCcccceeeeEcCCCCEEEEe-cCCEEEEccCCCCCcc
Confidence 3457888899987665554 4555532 12 122222222 2334567788889988877665 4565543223344332
Q ss_pred EeecCC----CCCeEEEEECCCCCEEEEecCCCeEEEEeCCCceeeeeecc--CCCCCeEEEEECCCCCEEEEEEcCCeE
Q psy4393 147 KTLPAH----SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID--DDNPPVSFVKFSPNGKYILAATLDNTL 220 (247)
Q Consensus 147 ~~~~~~----~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~dg~i 220 (247)
.....+ ...+..+.+.+++..++++ .+|.+.. ....++....... ........+.|..+++.++ .+..|.|
T Consensus 249 ~~~~~~~~~~~~~l~~v~~~~~~~~~~~G-~~G~v~~-S~d~G~tW~~~~~~~~~~~~~~~~~~~~~~~~~~-~G~~G~i 325 (334)
T PRK13684 249 SKPIIPEITNGYGYLDLAYRTPGEIWAGG-GNGTLLV-SKDGGKTWEKDPVGEEVPSNFYKIVFLDPEKGFV-LGQRGVL 325 (334)
T ss_pred ccccCCccccccceeeEEEcCCCCEEEEc-CCCeEEE-eCCCCCCCeECCcCCCCCcceEEEEEeCCCceEE-ECCCceE
Confidence 222211 2346778888887766554 5665543 3344433322211 1123466677776666544 5557888
Q ss_pred EEEECC
Q psy4393 221 KLWDSK 226 (247)
Q Consensus 221 ~vwd~~ 226 (247)
.-|+..
T Consensus 326 l~~~~~ 331 (334)
T PRK13684 326 LRYVGS 331 (334)
T ss_pred EEecCC
Confidence 877643
No 412
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=96.19 E-value=0.52 Score=40.98 Aligned_cols=127 Identities=16% Similarity=0.233 Sum_probs=81.9
Q ss_pred CCCCceEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEe-cccCCeEEEEEC--CCCCEEEEEcC
Q psy4393 13 PKPNYVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS-GHKLGISDVAWS--SDSRLLVSGSD 89 (247)
Q Consensus 13 ~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~-~~~~~v~~~~~~--~~~~~l~~~~~ 89 (247)
.+..|....++..-....+-+.-+.-++..+.-+....+.|||...+.....-. .....|.++.|. |+++.+++.+-
T Consensus 15 ~~~~w~~t~~~~T~i~~~~li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf 94 (631)
T PF12234_consen 15 NKIEWLLTSTFETGISNPSLISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGF 94 (631)
T ss_pred CeEEEEEEEEEecCCCCcceEeecccCcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEc
Confidence 455677777776555556666666655544444445579999998776543322 346679999995 68999999888
Q ss_pred CCeEEEEECCC------c---eEEEEE--ecCC-ccEEEEEEcCCCCEEEEeeCCCCEEEEECC
Q psy4393 90 DKTLKIWELSS------G---KCLKTL--KGHS-NYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141 (247)
Q Consensus 90 d~~i~v~d~~~------~---~~~~~~--~~~~-~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~ 141 (247)
.+.|.+|.-.. + ..++.+ ..+. .+|.+..|.++|.+++..+ ..+.++|-.
T Consensus 95 ~~~v~l~~Q~R~dy~~~~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~sG--Nqlfv~dk~ 156 (631)
T PF12234_consen 95 PHHVLLYTQLRYDYTNKGPSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGSG--NQLFVFDKW 156 (631)
T ss_pred CcEEEEEEccchhhhcCCcccceeEEEEeecCCCCCccceeEecCCeEEEEeC--CEEEEECCC
Confidence 99998885421 1 122222 2232 4678889999988776543 457777643
No 413
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=96.11 E-value=0.83 Score=39.79 Aligned_cols=109 Identities=20% Similarity=0.322 Sum_probs=69.3
Q ss_pred eEEEEECCCCCEEEEEcCCCeEEEEECCCceEEEEEe-cCCccEEEEEEc--CCCCEEEEeeCCCCEEEEECC-----C-
Q psy4393 72 ISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLK-GHSNYVFCCNFN--PQSNLIVSGSFDESVRIWDVR-----T- 142 (247)
Q Consensus 72 v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~~v~~~~~~--~~~~~l~~~~~d~~i~v~d~~-----~- 142 (247)
..-+.-+.-++..++-+....+.|||.+.+.....-. ...+.|..++|. |+++.+++.+....|.++--. .
T Consensus 32 ~~li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~~ 111 (631)
T PF12234_consen 32 PSLISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTNK 111 (631)
T ss_pred cceEeecccCcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhcC
Confidence 3334444444544454555689999998776332221 346678888884 688999998999999888531 1
Q ss_pred ---CeEEEee--cCCC-CCeEEEEECCCCCEEEEecCCCeEEEEeC
Q psy4393 143 ---GKCLKTL--PAHS-DPVSAVHFNRDGSLIVSSSYDGLCRIWDT 182 (247)
Q Consensus 143 ---~~~~~~~--~~~~-~~i~~~~~~~~~~~l~~~~~dg~i~v~d~ 182 (247)
...++.+ ..+. .+|.+..|.++|.+++.+ +.++.|+|-
T Consensus 112 ~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~s--GNqlfv~dk 155 (631)
T PF12234_consen 112 GPSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGS--GNQLFVFDK 155 (631)
T ss_pred CcccceeEEEEeecCCCCCccceeEecCCeEEEEe--CCEEEEECC
Confidence 1123322 2222 578889999999766543 566778764
No 414
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=95.97 E-value=0.059 Score=28.66 Aligned_cols=32 Identities=25% Similarity=0.340 Sum_probs=26.5
Q ss_pred CCeEEEEECCCC---CEEEEecCCCeEEEEeCCCc
Q psy4393 154 DPVSAVHFNRDG---SLIVSSSYDGLCRIWDTASG 185 (247)
Q Consensus 154 ~~i~~~~~~~~~---~~l~~~~~dg~i~v~d~~~~ 185 (247)
+.+.+++|+|.. .+|+.+-..|.+.++|+++.
T Consensus 1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~~ 35 (43)
T PF10313_consen 1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRSN 35 (43)
T ss_pred CCeEEEEeCCCCCcccEEEEEccCCeEEEEEcccC
Confidence 468899999854 48888888899999999853
No 415
>PRK10115 protease 2; Provisional
Probab=95.89 E-value=1.2 Score=39.72 Aligned_cols=111 Identities=8% Similarity=0.084 Sum_probs=65.5
Q ss_pred EEEEEEcCCCCEEEEeeCC-----CCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCC------CeEEEEeC
Q psy4393 114 VFCCNFNPQSNLIVSGSFD-----ESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD------GLCRIWDT 182 (247)
Q Consensus 114 v~~~~~~~~~~~l~~~~~d-----~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d------g~i~v~d~ 182 (247)
+....++|++++++.+... ..|++.|+.++..+...... .-..++|.+|++.|+....+ ..+..+++
T Consensus 129 l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~--~~~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h~l 206 (686)
T PRK10115 129 LGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDN--VEPSFVWANDSWTFYYVRKHPVTLLPYQVWRHTI 206 (686)
T ss_pred EeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccC--cceEEEEeeCCCEEEEEEecCCCCCCCEEEEEEC
Confidence 5567889999988876432 25889999887533221111 11458999998866554332 36777888
Q ss_pred CCceee-eeeccCCCCCeE-EEEECCCCCEEEEEEc---CCeEEEEECC
Q psy4393 183 ASGQCL-KTLIDDDNPPVS-FVKFSPNGKYILAATL---DNTLKLWDSK 226 (247)
Q Consensus 183 ~~~~~~-~~~~~~~~~~v~-~~~~s~~~~~l~~~~~---dg~i~vwd~~ 226 (247)
.++... ..+......... ....+.|+++++..+. ++.+.+++..
T Consensus 207 gt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~~ 255 (686)
T PRK10115 207 GTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDAE 255 (686)
T ss_pred CCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEECc
Confidence 877321 112222222222 3344558887765543 4589999853
No 416
>PHA03098 kelch-like protein; Provisional
Probab=95.87 E-value=0.29 Score=42.18 Aligned_cols=106 Identities=17% Similarity=0.175 Sum_probs=51.3
Q ss_pred CCCEEEEEcCC------CeEEEEECCCceEEEEEecCCccEEEEEEcCCCCEEEEeeCCC--------CEEEEECCCCeE
Q psy4393 80 DSRLLVSGSDD------KTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE--------SVRIWDVRTGKC 145 (247)
Q Consensus 80 ~~~~l~~~~~d------~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--------~i~v~d~~~~~~ 145 (247)
+++.++.|+.+ ..+..||..+.+....-..............++.+++.|+.+. .+..||..+.+-
T Consensus 389 ~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W 468 (534)
T PHA03098 389 NNLIYVIGGISKNDELLKTVECFSLNTNKWSKGSPLPISHYGGCAIYHDGKIYVIGGISYIDNIKVYNIVESYNPVTNKW 468 (534)
T ss_pred CCEEEEECCcCCCCcccceEEEEeCCCCeeeecCCCCccccCceEEEECCEEEEECCccCCCCCcccceEEEecCCCCce
Confidence 45666666632 3578889877543221110011111112223456667776432 278888876542
Q ss_pred E--EeecCCCCCeEEEEECCCCCEEEEecCC-----CeEEEEeCCCcee
Q psy4393 146 L--KTLPAHSDPVSAVHFNRDGSLIVSSSYD-----GLCRIWDTASGQC 187 (247)
Q Consensus 146 ~--~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~v~d~~~~~~ 187 (247)
. ..+.........+.+ ++.+++.|+.+ ..+.+||..+.+.
T Consensus 469 ~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 515 (534)
T PHA03098 469 TELSSLNFPRINASLCIF--NNKIYVVGGDKYEYYINEIEVYDDKTNTW 515 (534)
T ss_pred eeCCCCCcccccceEEEE--CCEEEEEcCCcCCcccceeEEEeCCCCEE
Confidence 1 111111111112222 56666777654 3677788776553
No 417
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=95.83 E-value=0.86 Score=37.63 Aligned_cols=180 Identities=17% Similarity=0.233 Sum_probs=83.9
Q ss_pred CCCCCEEEEE--eCC----CeEEEEecCCCeEEEEEecccC---CeEEEEECCCCCEEEEEcC-----------------
Q psy4393 36 SPNGEWLASS--SAD----KLIKIWGAYDGKFEKTISGHKL---GISDVAWSSDSRLLVSGSD----------------- 89 (247)
Q Consensus 36 s~~~~~l~~~--~~d----g~v~iw~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~----------------- 89 (247)
-|+|+.++++ +.+ |.+.++|.++.+.......... --.++-|.|-.+.+++...
T Consensus 138 lp~G~imIS~lGd~~G~g~Ggf~llD~~tf~v~g~We~~~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~~d~~~ 217 (461)
T PF05694_consen 138 LPDGRIMISALGDADGNGPGGFVLLDGETFEVKGRWEKDRGPQPFGYDFWYQPRHNVMISSEWGAPSMFEKGFNPEDLEA 217 (461)
T ss_dssp -SS--EEEEEEEETTS-S--EEEEE-TTT--EEEE--SB-TT------EEEETTTTEEEE-B---HHHHTT---TTTHHH
T ss_pred cCCccEEEEeccCCCCCCCCcEEEEcCccccccceeccCCCCCCCCCCeEEcCCCCEEEEeccCChhhcccCCChhHhhc
Confidence 4788877663 333 4577778776665555443221 2346777887787877642
Q ss_pred ---CCeEEEEECCCceEEEEEecCCc--cEEEEEEc--CCCCEEEEeeC-CCCEE-EEECCCCe----EEEeecC-----
Q psy4393 90 ---DKTLKIWELSSGKCLKTLKGHSN--YVFCCNFN--PQSNLIVSGSF-DESVR-IWDVRTGK----CLKTLPA----- 151 (247)
Q Consensus 90 ---d~~i~v~d~~~~~~~~~~~~~~~--~v~~~~~~--~~~~~l~~~~~-d~~i~-v~d~~~~~----~~~~~~~----- 151 (247)
...+++||+.+.+.++.+.-... ....+.|. |+...-++++. ...|. +|....++ .+..+..
T Consensus 218 ~~yG~~l~vWD~~~r~~~Q~idLg~~g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~ 297 (461)
T PF05694_consen 218 GKYGHSLHVWDWSTRKLLQTIDLGEEGQMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEG 297 (461)
T ss_dssp H-S--EEEEEETTTTEEEEEEES-TTEEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--S
T ss_pred ccccCeEEEEECCCCcEeeEEecCCCCCceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCc
Confidence 24799999999998888764332 23455554 44544444332 23333 33323332 1111111
Q ss_pred ------------CCCCeEEEEECCCCCEEEEec-CCCeEEEEeCCCce---eeeeeccCC---------------CCCeE
Q psy4393 152 ------------HSDPVSAVHFNRDGSLIVSSS-YDGLCRIWDTASGQ---CLKTLIDDD---------------NPPVS 200 (247)
Q Consensus 152 ------------~~~~i~~~~~~~~~~~l~~~~-~dg~i~v~d~~~~~---~~~~~~~~~---------------~~~v~ 200 (247)
-..-++.+.+|.|.++|+... .+|.++.||+.... ......... ...-.
T Consensus 298 ~~lp~ml~~~~~~P~LitDI~iSlDDrfLYvs~W~~GdvrqYDISDP~~Pkl~gqv~lGG~~~~~~~~~v~g~~l~GgPq 377 (461)
T PF05694_consen 298 WILPEMLKPFGAVPPLITDILISLDDRFLYVSNWLHGDVRQYDISDPFNPKLVGQVFLGGSIRKGDHPVVKGKRLRGGPQ 377 (461)
T ss_dssp S---GGGGGG-EE------EEE-TTS-EEEEEETTTTEEEEEE-SSTTS-EEEEEEE-BTTTT-B--TTS------S---
T ss_pred ccccccccccccCCCceEeEEEccCCCEEEEEcccCCcEEEEecCCCCCCcEEeEEEECcEeccCCCccccccccCCCCC
Confidence 023468899999999887655 58999999987643 222211110 01125
Q ss_pred EEEECCCCCEEEEEE
Q psy4393 201 FVKFSPNGKYILAAT 215 (247)
Q Consensus 201 ~~~~s~~~~~l~~~~ 215 (247)
.+..|-||+.|+..+
T Consensus 378 MvqlS~DGkRlYvTn 392 (461)
T PF05694_consen 378 MVQLSLDGKRLYVTN 392 (461)
T ss_dssp -EEE-TTSSEEEEE-
T ss_pred eEEEccCCeEEEEEe
Confidence 578889998887665
No 418
>KOG3630|consensus
Probab=95.83 E-value=0.14 Score=46.70 Aligned_cols=132 Identities=16% Similarity=-0.007 Sum_probs=80.0
Q ss_pred cEEEEEEcCCCCEEEEe--eCCCCEEEEECCCCeEEE-----eecCC------CCCeEEEEECCCCC-EEEEecCCCeEE
Q psy4393 113 YVFCCNFNPQSNLIVSG--SFDESVRIWDVRTGKCLK-----TLPAH------SDPVSAVHFNRDGS-LIVSSSYDGLCR 178 (247)
Q Consensus 113 ~v~~~~~~~~~~~l~~~--~~d~~i~v~d~~~~~~~~-----~~~~~------~~~i~~~~~~~~~~-~l~~~~~dg~i~ 178 (247)
.+..+...+|+...+.. +.+-.|..||++....-. .+..+ ..-..++.|+|.-. ..+++..|+.|.
T Consensus 102 pi~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl~ 181 (1405)
T KOG3630|consen 102 PIVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSLR 181 (1405)
T ss_pred cceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccchh
Confidence 34445556665544433 334468999997533211 11111 22346778888543 345666788887
Q ss_pred EEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcceEEEEccCCcccceee
Q psy4393 179 IWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTPLNLNYFYR 245 (247)
Q Consensus 179 v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~ 245 (247)
+.-+........ ...-....++++|+|.|+.++.|-..|++.-|.........+-..|..++|+.-
T Consensus 182 V~~~~~~~~~v~-s~p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~leik~~ip~Pp~~e~yrvl 247 (1405)
T KOG3630|consen 182 VKSTKQLAQNVT-SFPVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPSLEIKSEIPEPPVEENYRVL 247 (1405)
T ss_pred hhhhhhhhhhhc-ccCcccceeeEEeccccceeeEecCCCeEEEeecccceeecccCCCcCCCccee
Confidence 765432211111 012234568999999999999999999999998766655556666666666543
No 419
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=95.82 E-value=0.78 Score=40.86 Aligned_cols=28 Identities=18% Similarity=0.179 Sum_probs=21.0
Q ss_pred ccEEEEEEcCCCCEEEEeeCCCCEEEEEC
Q psy4393 112 NYVFCCNFNPQSNLIVSGSFDESVRIWDV 140 (247)
Q Consensus 112 ~~v~~~~~~~~~~~l~~~~~d~~i~v~d~ 140 (247)
..|..+..+|+|.+++..|..| |.|..+
T Consensus 85 f~v~~i~~n~~g~~lal~G~~~-v~V~~L 112 (717)
T PF10168_consen 85 FEVHQISLNPTGSLLALVGPRG-VVVLEL 112 (717)
T ss_pred eeEEEEEECCCCCEEEEEcCCc-EEEEEe
Confidence 4577889999999999888754 555554
No 420
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=95.81 E-value=0.79 Score=38.50 Aligned_cols=145 Identities=23% Similarity=0.308 Sum_probs=86.0
Q ss_pred CCCCCEEEE-EcCCCeEEEEECCCceEEEEEecCCccEEEEEEcCCCC-------EEEEeeCCCCEEEEECCCC-eEEEe
Q psy4393 78 SSDSRLLVS-GSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSN-------LIVSGSFDESVRIWDVRTG-KCLKT 148 (247)
Q Consensus 78 ~~~~~~l~~-~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~-------~l~~~~~d~~i~v~d~~~~-~~~~~ 148 (247)
..+.++|+. ++.-..++-.|++.|+.+.....+... -+.+.|+.. .-+.|-.+..|--.|.|.. ..+..
T Consensus 476 ~~dssli~~dg~~~~kLykmDIErGkvveeW~~~ddv--vVqy~p~~kf~qmt~eqtlvGlS~~svFrIDPR~~gNKi~v 553 (776)
T COG5167 476 DNDSSLIYLDGGERDKLYKMDIERGKVVEEWDLKDDV--VVQYNPYFKFQQMTDEQTLVGLSDYSVFRIDPRARGNKIKV 553 (776)
T ss_pred cCCcceEEecCCCcccceeeecccceeeeEeecCCcc--eeecCCchhHHhcCccceEEeecccceEEecccccCCceee
Confidence 345555544 333445666788888888888777664 356777431 2233445555555566532 22222
Q ss_pred ecCC----CCCeEEEEECCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEE
Q psy4393 149 LPAH----SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224 (247)
Q Consensus 149 ~~~~----~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd 224 (247)
.... .....+..-. ...++|+++..|.|++||--. ...++....-+..|..+..+.+|+++++.+ ...+.+-|
T Consensus 554 ~esKdY~tKn~Fss~~tT-esGyIa~as~kGDirLyDRig-~rAKtalP~lG~aIk~idvta~Gk~ilaTC-k~yllL~d 630 (776)
T COG5167 554 VESKDYKTKNKFSSGMTT-ESGYIAAASRKGDIRLYDRIG-KRAKTALPGLGDAIKHIDVTANGKHILATC-KNYLLLTD 630 (776)
T ss_pred eeehhccccccccccccc-cCceEEEecCCCceeeehhhc-chhhhcCcccccceeeeEeecCCcEEEEee-cceEEEEe
Confidence 1111 1112222222 345899999999999998533 223334444456788899999999988777 46788888
Q ss_pred CCC
Q psy4393 225 SKV 227 (247)
Q Consensus 225 ~~~ 227 (247)
.+.
T Consensus 631 ~~i 633 (776)
T COG5167 631 VPI 633 (776)
T ss_pred ccc
Confidence 653
No 421
>KOG4499|consensus
Probab=95.76 E-value=0.59 Score=35.17 Aligned_cols=142 Identities=15% Similarity=0.197 Sum_probs=84.2
Q ss_pred CCeEEEEECCCCCEEEEEcCC---------CeEEEEECCCceEEEEEecCCccEEEEEEcCCCCEEEE-eeCCCCEEEEE
Q psy4393 70 LGISDVAWSSDSRLLVSGSDD---------KTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVS-GSFDESVRIWD 139 (247)
Q Consensus 70 ~~v~~~~~~~~~~~l~~~~~d---------~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d~~i~v~d 139 (247)
.+.++-..+|+|+++.-.-.+ |.++.|-... .+..+.....--..++|+.+.+.++. -+.+-.|.-||
T Consensus 109 nR~NDgkvdP~Gryy~GtMad~~~~le~~~g~Ly~~~~~h--~v~~i~~~v~IsNgl~Wd~d~K~fY~iDsln~~V~a~d 186 (310)
T KOG4499|consen 109 NRLNDGKVDPDGRYYGGTMADFGDDLEPIGGELYSWLAGH--QVELIWNCVGISNGLAWDSDAKKFYYIDSLNYEVDAYD 186 (310)
T ss_pred cccccCccCCCCceeeeeeccccccccccccEEEEeccCC--CceeeehhccCCccccccccCcEEEEEccCceEEeeee
Confidence 345566778999985432222 3444444321 12223333333456788877776654 45566777777
Q ss_pred --CCCCeE-----EEeecC---CCC-CeEEEEECCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECC-C
Q psy4393 140 --VRTGKC-----LKTLPA---HSD-PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP-N 207 (247)
Q Consensus 140 --~~~~~~-----~~~~~~---~~~-~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~-~ 207 (247)
..+|.. +..++. .+. .--.|+++.+|.+.+++-..+.|..+|..+++.+..+... ...+++++|-- +
T Consensus 187 yd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~dp~tGK~L~eiklP-t~qitsccFgGkn 265 (310)
T KOG4499|consen 187 YDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQKVDPTTGKILLEIKLP-TPQITSCCFGGKN 265 (310)
T ss_pred cCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEEECCCCCcEEEEEEcC-CCceEEEEecCCC
Confidence 555532 222221 111 1234566778888888888889999999999988877555 56789998863 3
Q ss_pred CCEEEEE
Q psy4393 208 GKYILAA 214 (247)
Q Consensus 208 ~~~l~~~ 214 (247)
-..|++.
T Consensus 266 ~d~~yvT 272 (310)
T KOG4499|consen 266 LDILYVT 272 (310)
T ss_pred ccEEEEE
Confidence 3344443
No 422
>KOG1983|consensus
Probab=95.72 E-value=1.1 Score=41.70 Aligned_cols=31 Identities=29% Similarity=0.420 Sum_probs=26.6
Q ss_pred CCeEEEEECCCCCEEEEEeCCCeEEEEecCC
Q psy4393 28 KAVSSVKFSPNGEWLASSSADKLIKIWGAYD 58 (247)
Q Consensus 28 ~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~ 58 (247)
.....++|+|.-.++|.+..+|.++++....
T Consensus 36 ~~~~~~afD~~q~llai~t~tg~i~~yg~~~ 66 (993)
T KOG1983|consen 36 STPSALAFDPTQGLLAIGTRTGAIKIYGQPG 66 (993)
T ss_pred CCCcceeeccccceEEEEEecccEEEecccc
Confidence 4566789999999999999999999997643
No 423
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=95.68 E-value=0.065 Score=28.51 Aligned_cols=30 Identities=23% Similarity=0.362 Sum_probs=24.8
Q ss_pred CeEEEEECCCC---CEEEEEEcCCeEEEEECCC
Q psy4393 198 PVSFVKFSPNG---KYILAATLDNTLKLWDSKV 227 (247)
Q Consensus 198 ~v~~~~~s~~~---~~l~~~~~dg~i~vwd~~~ 227 (247)
.+.++.|+|.. .+|+.+-..|.|.|+|.++
T Consensus 2 AvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 2 AVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS 34 (43)
T ss_pred CeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence 57889999854 4777777789999999995
No 424
>KOG1916|consensus
Probab=95.64 E-value=0.012 Score=51.77 Aligned_cols=115 Identities=12% Similarity=0.216 Sum_probs=65.4
Q ss_pred EecCCCCeEEEEECCCC-CEEEEEeCCCeEEEEecC--CCeEEEEE-----ecccCCeEEEEECC---CCCEEEEEcCCC
Q psy4393 23 LAGHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAY--DGKFEKTI-----SGHKLGISDVAWSS---DSRLLVSGSDDK 91 (247)
Q Consensus 23 ~~~h~~~v~~~~~s~~~-~~l~~~~~dg~v~iw~~~--~~~~~~~~-----~~~~~~v~~~~~~~---~~~~l~~~~~d~ 91 (247)
+++..+.|-.+.|.... ..++ ..-|.+.||++. .|+....+ ......+.-+.|+| +..+++.+..++
T Consensus 128 ~kgf~G~v~dl~fah~~~pk~~--~~vg~lfVy~vd~l~G~iq~~l~v~~~~p~gs~~~~V~wcp~~~~~~~ic~~~~~~ 205 (1283)
T KOG1916|consen 128 AKGFPGGVGDLQFAHTKCPKGR--RLVGELFVYDVDVLQGEIQPQLEVTPITPYGSDPQLVSWCPIAVNKVYICYGLKGG 205 (1283)
T ss_pred HhcCCCCcccccccccCChHHH--HHhhhhheeehHhhccccccceEEeecCcCCCCcceeeecccccccceeeeccCCC
Confidence 35667888888885432 2222 223667888864 44433322 22333456667776 556777788888
Q ss_pred eEEEEECCCceEEEEEecCCccEEEE-----------EEcCCCCEEEEeeCCCCEEEEEC
Q psy4393 92 TLKIWELSSGKCLKTLKGHSNYVFCC-----------NFNPQSNLIVSGSFDESVRIWDV 140 (247)
Q Consensus 92 ~i~v~d~~~~~~~~~~~~~~~~v~~~-----------~~~~~~~~l~~~~~d~~i~v~d~ 140 (247)
.+++....+... ..+++|...+..+ ..+|||..++..+.||.++.|.+
T Consensus 206 ~i~lL~~~ra~~-~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Qi 264 (1283)
T KOG1916|consen 206 EIRLLNINRALR-SLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVGFYQI 264 (1283)
T ss_pred ceeEeeechHHH-HHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCccceeee
Confidence 888887765322 2233343332222 35666666666666666666654
No 425
>KOG4460|consensus
Probab=95.48 E-value=0.84 Score=38.45 Aligned_cols=29 Identities=14% Similarity=0.330 Sum_probs=21.7
Q ss_pred eEEEEECCCC---CEEEEEEcCCeEEEEECCC
Q psy4393 199 VSFVKFSPNG---KYILAATLDNTLKLWDSKV 227 (247)
Q Consensus 199 v~~~~~s~~~---~~l~~~~~dg~i~vwd~~~ 227 (247)
+...+|+|+. .+|..-+.|+.||+||...
T Consensus 168 l~Qa~WHP~S~~D~hL~iL~sdnviRiy~lS~ 199 (741)
T KOG4460|consen 168 LKQAAWHPSSILDPHLVLLTSDNVIRIYSLSE 199 (741)
T ss_pred eeeccccCCccCCceEEEEecCcEEEEEecCC
Confidence 4556788875 6777778889999998754
No 426
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=95.46 E-value=1.9 Score=38.92 Aligned_cols=150 Identities=14% Similarity=0.186 Sum_probs=89.7
Q ss_pred CCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeE-------------EEEECC--CCCEEEEEcC----------CCeE
Q psy4393 39 GEWLASSSADKLIKIWGAYDGKFEKTISGHKLGIS-------------DVAWSS--DSRLLVSGSD----------DKTL 93 (247)
Q Consensus 39 ~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~-------------~~~~~~--~~~~l~~~~~----------d~~i 93 (247)
+.+++.++.|+.+.-.|..+++....+.. ...+. .+.-.| .+..+++++. +|.|
T Consensus 260 ~~rV~~~T~Dg~LiALDA~TGk~~W~fg~-~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I 338 (764)
T TIGR03074 260 ARRIILPTSDARLIALDADTGKLCEDFGN-NGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVI 338 (764)
T ss_pred CCEEEEecCCCeEEEEECCCCCEEEEecC-CCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEE
Confidence 44777888899999999998887765532 11110 111112 2345555532 5889
Q ss_pred EEEECCCceEEEEEecC---------Cc--------cE-EEEEEcCCCCEEEEeeC------------------CCCEEE
Q psy4393 94 KIWELSSGKCLKTLKGH---------SN--------YV-FCCNFNPQSNLIVSGSF------------------DESVRI 137 (247)
Q Consensus 94 ~v~d~~~~~~~~~~~~~---------~~--------~v-~~~~~~~~~~~l~~~~~------------------d~~i~v 137 (247)
+-+|.++|+.+-.+... .+ .+ ....+++...+++.+.. .+.|.-
T Consensus 339 ~A~Da~TGkl~W~~~~g~p~~~~~~~~g~~~~~gg~n~W~~~s~D~~~glvy~ptGn~~pd~~g~~r~~~~n~y~~slvA 418 (764)
T TIGR03074 339 RAFDVNTGALVWAWDPGNPDPTAPPAPGETYTRNTPNSWSVASYDEKLGLVYLPMGNQTPDQWGGDRTPADEKYSSSLVA 418 (764)
T ss_pred EEEECCCCcEeeEEecCCCCcccCCCCCCEeccCCCCccCceEEcCCCCeEEEeCCCccccccCCccccCcccccceEEE
Confidence 99999999877655311 00 01 12345555555544321 235677
Q ss_pred EECCCCeEEEeecCCCCCe---------EEEEECC-CCC---EEEEecCCCeEEEEeCCCceeee
Q psy4393 138 WDVRTGKCLKTLPAHSDPV---------SAVHFNR-DGS---LIVSSSYDGLCRIWDTASGQCLK 189 (247)
Q Consensus 138 ~d~~~~~~~~~~~~~~~~i---------~~~~~~~-~~~---~l~~~~~dg~i~v~d~~~~~~~~ 189 (247)
.|+++|+....++.....+ .-+.+.. +|+ .++.++.+|.+.++|.++++.+.
T Consensus 419 LD~~TGk~~W~~Q~~~hD~WD~D~~~~p~L~d~~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~l~ 483 (764)
T TIGR03074 419 LDATTGKERWVFQTVHHDLWDMDVPAQPSLVDLPDADGTTVPALVAPTKQGQIYVLDRRTGEPIV 483 (764)
T ss_pred EeCCCCceEEEecccCCccccccccCCceEEeeecCCCcEeeEEEEECCCCEEEEEECCCCCEEe
Confidence 7888888877765422111 1122322 553 78889999999999999987654
No 427
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=95.22 E-value=0.59 Score=38.64 Aligned_cols=83 Identities=11% Similarity=0.211 Sum_probs=54.7
Q ss_pred CeEEEEECCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCC-----------------CCEE-EEEEc
Q psy4393 155 PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPN-----------------GKYI-LAATL 216 (247)
Q Consensus 155 ~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~-----------------~~~l-~~~~~ 216 (247)
.+.+++.+|++++.++...=|.|.++|+.++..++.+..-....+..+..... ..+| +.+-.
T Consensus 309 ~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRdAqc~wi~~~~~~~~~~~~~~~~~~~~~~~l~LvIyapr 388 (415)
T PF14655_consen 309 EGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRDAQCGWIEVPEEGDRDRSNSNSPKSSSRFALFLVIYAPR 388 (415)
T ss_pred eEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhccCccceEEEEEeecccccccccccccCCCCcceEEEEEEecc
Confidence 46788999999988887777899999999887655543322222222221111 1133 34556
Q ss_pred CCeEEEEECCCcceEEEEccC
Q psy4393 217 DNTLKLWDSKVVTPAIICSTP 237 (247)
Q Consensus 217 dg~i~vwd~~~~~~~~~~~~~ 237 (247)
-|.|.||+++++.-+..++.+
T Consensus 389 Rg~lEvW~~~~g~Rv~a~~v~ 409 (415)
T PF14655_consen 389 RGILEVWSMRQGPRVAAFNVG 409 (415)
T ss_pred CCeEEEEecCCCCEEEEEEeC
Confidence 899999999998776665543
No 428
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=95.14 E-value=1.6 Score=39.04 Aligned_cols=72 Identities=15% Similarity=0.191 Sum_probs=44.3
Q ss_pred CCeEEEEECCCCCEEEEEcCCCeEEEEECCC---------ceE--EE-EE--------ecCCccEEEEEEcCC---CCEE
Q psy4393 70 LGISDVAWSSDSRLLVSGSDDKTLKIWELSS---------GKC--LK-TL--------KGHSNYVFCCNFNPQ---SNLI 126 (247)
Q Consensus 70 ~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~---------~~~--~~-~~--------~~~~~~v~~~~~~~~---~~~l 126 (247)
..|..+..+|+|..++..+..|...+.=.+. ++. .+ .+ ......|..+.|+|. +..+
T Consensus 85 f~v~~i~~n~~g~~lal~G~~~v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~~l 164 (717)
T PF10168_consen 85 FEVHQISLNPTGSLLALVGPRGVVVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDSHL 164 (717)
T ss_pred eeEEEEEECCCCCEEEEEcCCcEEEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCCeE
Confidence 4588889999999998888776543322111 111 10 11 122345677788775 3666
Q ss_pred EEeeCCCCEEEEECC
Q psy4393 127 VSGSFDESVRIWDVR 141 (247)
Q Consensus 127 ~~~~~d~~i~v~d~~ 141 (247)
+.=..|+.+++||+.
T Consensus 165 ~vLtsdn~lR~y~~~ 179 (717)
T PF10168_consen 165 VVLTSDNTLRLYDIS 179 (717)
T ss_pred EEEecCCEEEEEecC
Confidence 666778888888874
No 429
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=95.02 E-value=0.34 Score=36.41 Aligned_cols=68 Identities=15% Similarity=0.386 Sum_probs=50.3
Q ss_pred ECCCCCEEEEecCCCeEEEEeCCCceeeeee------cc-------CCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCC
Q psy4393 161 FNRDGSLIVSSSYDGLCRIWDTASGQCLKTL------ID-------DDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKV 227 (247)
Q Consensus 161 ~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~------~~-------~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~ 227 (247)
+..++.+|++-+.+|.+++||+.+++..... .. .....|..+.++.+|.-+++-+ +|....|+.+.
T Consensus 18 l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls-ng~~y~y~~~L 96 (219)
T PF07569_consen 18 LECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS-NGDSYSYSPDL 96 (219)
T ss_pred EEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe-CCCEEEecccc
Confidence 4456788999999999999999987754322 22 2446688889998888776655 68889998765
Q ss_pred cc
Q psy4393 228 VT 229 (247)
Q Consensus 228 ~~ 229 (247)
..
T Consensus 97 ~~ 98 (219)
T PF07569_consen 97 GC 98 (219)
T ss_pred ce
Confidence 53
No 430
>PHA02790 Kelch-like protein; Provisional
Probab=94.93 E-value=1.3 Score=37.62 Aligned_cols=102 Identities=9% Similarity=0.089 Sum_probs=47.0
Q ss_pred CCCEEEEEcCCC---eEEEEECCCceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeE--EEeecCCCC
Q psy4393 80 DSRLLVSGSDDK---TLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC--LKTLPAHSD 154 (247)
Q Consensus 80 ~~~~l~~~~~d~---~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~--~~~~~~~~~ 154 (247)
+|+..+.|+.++ .+..||..+.+-...-.-...........-++.+.+.|+ ...+||..+++- +..+.....
T Consensus 362 ~g~IYviGG~~~~~~~ve~ydp~~~~W~~~~~m~~~r~~~~~~~~~~~IYv~GG---~~e~ydp~~~~W~~~~~m~~~r~ 438 (480)
T PHA02790 362 NNVIYVIGGHSETDTTTEYLLPNHDQWQFGPSTYYPHYKSCALVFGRRLFLVGR---NAEFYCESSNTWTLIDDPIYPRD 438 (480)
T ss_pred CCEEEEecCcCCCCccEEEEeCCCCEEEeCCCCCCccccceEEEECCEEEEECC---ceEEecCCCCcEeEcCCCCCCcc
Confidence 466666766543 466788876543221100001111111223455556653 467888876542 122221111
Q ss_pred CeEEEEECCCCCEEEEecCC-----CeEEEEeCCCce
Q psy4393 155 PVSAVHFNRDGSLIVSSSYD-----GLCRIWDTASGQ 186 (247)
Q Consensus 155 ~i~~~~~~~~~~~l~~~~~d-----g~i~v~d~~~~~ 186 (247)
....+. -+++..+.|+.+ ..+..||..+.+
T Consensus 439 ~~~~~v--~~~~IYviGG~~~~~~~~~ve~Yd~~~~~ 473 (480)
T PHA02790 439 NPELII--VDNKLLLIGGFYRGSYIDTIEVYNNRTYS 473 (480)
T ss_pred ccEEEE--ECCEEEEECCcCCCcccceEEEEECCCCe
Confidence 222222 256677777754 235555555443
No 431
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=94.92 E-value=1.8 Score=35.87 Aligned_cols=197 Identities=16% Similarity=0.130 Sum_probs=99.1
Q ss_pred EEEECCCCCEEEEEeCCC-----------eEEEEecCCCeEE--EEEecccCC--eEEEEECCCCCEEEEEcC---C-Ce
Q psy4393 32 SVKFSPNGEWLASSSADK-----------LIKIWGAYDGKFE--KTISGHKLG--ISDVAWSSDSRLLVSGSD---D-KT 92 (247)
Q Consensus 32 ~~~~s~~~~~l~~~~~dg-----------~v~iw~~~~~~~~--~~~~~~~~~--v~~~~~~~~~~~l~~~~~---d-~~ 92 (247)
.+.|.++++.++....+. .|..|.+-+.... ..+...... ...+..++|+++++.... + ..
T Consensus 174 ~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~ 253 (414)
T PF02897_consen 174 SVSWSDDGKGFFYTRFDEDQRTSDSGYPRQVYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESE 253 (414)
T ss_dssp EEEECTTSSEEEEEECSTTTSS-CCGCCEEEEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEE
T ss_pred eEEEeCCCCEEEEEEeCcccccccCCCCcEEEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCe
Confidence 389999988776544322 3667766554322 334333333 457888999998764332 2 45
Q ss_pred EEEEECCCc----eEEEEEec-CCccEEEEEEcCCCCEEEEee---CCCCEEEEECCCCeE---EEeecCCCCC--eEEE
Q psy4393 93 LKIWELSSG----KCLKTLKG-HSNYVFCCNFNPQSNLIVSGS---FDESVRIWDVRTGKC---LKTLPAHSDP--VSAV 159 (247)
Q Consensus 93 i~v~d~~~~----~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~---~d~~i~v~d~~~~~~---~~~~~~~~~~--i~~~ 159 (247)
+.+.+...+ .....+.. ..+....+... .+.+++... ..+.|...++..... ...+..+... +..+
T Consensus 254 v~~~d~~~~~~~~~~~~~l~~~~~~~~~~v~~~-~~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~l~~~ 332 (414)
T PF02897_consen 254 VYLLDLDDGGSPDAKPKLLSPREDGVEYYVDHH-GDRLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPEDEDVSLEDV 332 (414)
T ss_dssp EEEEECCCTTTSS-SEEEEEESSSS-EEEEEEE-TTEEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--SSSEEEEEE
T ss_pred EEEEeccccCCCcCCcEEEeCCCCceEEEEEcc-CCEEEEeeCCCCCCcEEEEecccccccccceeEEcCCCCceeEEEE
Confidence 788888764 22233332 23333333333 333443332 234566667766542 2244444443 4444
Q ss_pred EECCCCCEEEEe-cCCC--eEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEE--EEc--CCeEEEEECCCcceE
Q psy4393 160 HFNRDGSLIVSS-SYDG--LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILA--ATL--DNTLKLWDSKVVTPA 231 (247)
Q Consensus 160 ~~~~~~~~l~~~-~~dg--~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~--~~~--dg~i~vwd~~~~~~~ 231 (247)
.. .+.+|+.. -.++ .|.++++..+...........+.+..+...+++..+.. .+. =+++..||+.+++..
T Consensus 333 ~~--~~~~Lvl~~~~~~~~~l~v~~~~~~~~~~~~~~p~~g~v~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~t~~~~ 409 (414)
T PF02897_consen 333 SL--FKDYLVLSYRENGSSRLRVYDLDDGKESREIPLPEAGSVSGVSGDFDSDELRFSYSSFTTPPTVYRYDLATGELT 409 (414)
T ss_dssp EE--ETTEEEEEEEETTEEEEEEEETT-TEEEEEEESSSSSEEEEEES-TT-SEEEEEEEETTEEEEEEEEETTTTCEE
T ss_pred EE--ECCEEEEEEEECCccEEEEEECCCCcEEeeecCCcceEEeccCCCCCCCEEEEEEeCCCCCCEEEEEECCCCCEE
Confidence 43 44445443 3444 68899998333333333334445566665666654433 222 257888888777654
No 432
>KOG2280|consensus
Probab=94.76 E-value=2.7 Score=37.05 Aligned_cols=161 Identities=11% Similarity=0.177 Sum_probs=79.5
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEE-EE--ecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceE
Q psy4393 27 TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK-TI--SGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKC 103 (247)
Q Consensus 27 ~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~-~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~ 103 (247)
++.+..+.|+.+..+| ....+|.+++|+........ .+ ......|..+.+..+|-.+++ .+|.+.+-+-.....
T Consensus 83 ~~~lI~mgWs~~eeLI-~v~k~g~v~Vy~~~ge~ie~~svg~e~~~~~I~ec~~f~~GVavlt--~~g~v~~i~~~~~~~ 159 (829)
T KOG2280|consen 83 HGELIGMGWSDDEELI-CVQKDGTVHVYGLLGEFIESNSVGFESQMSDIVECRFFHNGVAVLT--VSGQVILINGVEEPK 159 (829)
T ss_pred CCCeeeecccCCceEE-EEeccceEEEeecchhhhcccccccccccCceeEEEEecCceEEEe--cCCcEEEEcCCCcch
Confidence 3578899999776655 45799999999975432221 11 122334666666666644444 345444333211111
Q ss_pred EEEEec---CCccEEE-EEEcCCCC--EEEEee-CCCCEEEEECCCCe-EEEeecCCCCCeEEEEECCCCCEEEEecCCC
Q psy4393 104 LKTLKG---HSNYVFC-CNFNPQSN--LIVSGS-FDESVRIWDVRTGK-CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 175 (247)
Q Consensus 104 ~~~~~~---~~~~v~~-~~~~~~~~--~l~~~~-~d~~i~v~d~~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg 175 (247)
...++. ....-.| ..+.|..+ .++-.. ..+ ..++....+. ....+....+.+..+.++|+.++|+--...|
T Consensus 160 ~~~~~diP~~~~~~~~Wt~~~~~~~~~~ll~v~~~v~-~~~~q~~~~~~q~~~~~~~~~~~~ki~VS~n~~~laLyt~~G 238 (829)
T KOG2280|consen 160 LRKMPDIPYNELPKSCWTVFQPHRQSTILLDVDVAVG-LHICQVEESRVQLHALSWPNSSVVKISVSPNRRFLALYTETG 238 (829)
T ss_pred hhhCCCCCCccCCCcceeEecCCCcceeEEeechhhh-hcccceecccccccccCCCCceEEEEEEcCCcceEEEEecCC
Confidence 122221 1111011 11222211 111111 001 1111111111 0111222234677889999999999989999
Q ss_pred eEEEEeCCCceeeeee
Q psy4393 176 LCRIWDTASGQCLKTL 191 (247)
Q Consensus 176 ~i~v~d~~~~~~~~~~ 191 (247)
.+.+-+.+..+....+
T Consensus 239 ~i~~vs~D~~~~lce~ 254 (829)
T KOG2280|consen 239 KIWVVSIDLSQILCEF 254 (829)
T ss_pred cEEEEecchhhhhhcc
Confidence 9988887766554443
No 433
>KOG2247|consensus
Probab=94.55 E-value=0.0039 Score=51.04 Aligned_cols=139 Identities=14% Similarity=0.239 Sum_probs=92.9
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEE-EEEcCCCeEEEEECCCceEEE
Q psy4393 27 TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLL-VSGSDDKTLKIWELSSGKCLK 105 (247)
Q Consensus 27 ~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~v~d~~~~~~~~ 105 (247)
-..-....|-|.+.-++.++.+-.+..||...... .... ..+...+++|..++..+ +.+...+.+.+||+.+.....
T Consensus 34 lv~pi~~~w~~e~~nlavaca~tiv~~YD~agq~~-le~n-~tg~aldm~wDkegdvlavlAek~~piylwd~n~eytqq 111 (615)
T KOG2247|consen 34 LVGPIIHRWRPEGHNLAVACANTIVIYYDKAGQVI-LELN-PTGKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEYTQQ 111 (615)
T ss_pred ccccceeeEecCCCceehhhhhhHHHhhhhhccee-cccC-CchhHhhhhhccccchhhhhhhcCCCeeechhhhhhHHH
Confidence 33444567888776688888888888888643222 1211 23446678888877764 455667899999997642211
Q ss_pred -EEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEE
Q psy4393 106 -TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLI 168 (247)
Q Consensus 106 -~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 168 (247)
.+.+ ...-.-..|++....++.+...|.+.+++..+.+.+.....|...++++++.+.+..+
T Consensus 112 LE~gg-~~s~sll~wsKg~~el~ig~~~gn~viynhgtsR~iiv~Gkh~RRgtq~av~lEd~vi 174 (615)
T KOG2247|consen 112 LESGG-TSSKSLLAWSKGTPELVIGNNAGNIVIYNHGTSRRIIVMGKHQRRGTQIAVTLEDYVI 174 (615)
T ss_pred HhccC-cchHHHHhhccCCccccccccccceEEEeccchhhhhhhcccccceeEEEecccceee
Confidence 1111 1111125788888888999899999999988877666666677788888988866533
No 434
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=94.16 E-value=0.37 Score=25.16 Aligned_cols=39 Identities=13% Similarity=0.026 Sum_probs=30.1
Q ss_pred CCCCEEEEEE-cCCeEEEEECCCcceEEEEccCCccccee
Q psy4393 206 PNGKYILAAT-LDNTLKLWDSKVVTPAIICSTPLNLNYFY 244 (247)
Q Consensus 206 ~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~ 244 (247)
|++++|+++. .++.|.++|..+...+..+.....|+.|.
T Consensus 1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~vg~~P~~i~ 40 (42)
T TIGR02276 1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPVGGYPFGVA 40 (42)
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCeEEEEEECCCCCceEE
Confidence 5778777766 47899999999888877777766677664
No 435
>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]
Probab=94.02 E-value=1.8 Score=32.03 Aligned_cols=104 Identities=8% Similarity=-0.035 Sum_probs=52.3
Q ss_pred CCCEEEEEeCC--CeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEE-EEEcCCCeEEEEECCCceEEEEEecCCccE
Q psy4393 38 NGEWLASSSAD--KLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLL-VSGSDDKTLKIWELSSGKCLKTLKGHSNYV 114 (247)
Q Consensus 38 ~~~~l~~~~~d--g~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v 114 (247)
+|.++.+.+.- ..|++|++.+++...+..-....+..--...-++.+ .-.=.+|.-..+|..+-+++..+.-. +.=
T Consensus 55 ~g~i~esTG~yg~S~ir~~~L~~gq~~~s~~l~~~~~FgEGit~~gd~~y~LTw~egvaf~~d~~t~~~lg~~~y~-GeG 133 (262)
T COG3823 55 DGHILESTGLYGFSKIRVSDLTTGQEIFSEKLAPDTVFGEGITKLGDYFYQLTWKEGVAFKYDADTLEELGRFSYE-GEG 133 (262)
T ss_pred CCEEEEeccccccceeEEEeccCceEEEEeecCCccccccceeeccceEEEEEeccceeEEEChHHhhhhcccccC-Ccc
Confidence 44555554433 468999998887665543221112111111112322 23345777778888776665544322 222
Q ss_pred EEEEEcCCCCEEEEeeCCCCEEEEECCCCe
Q psy4393 115 FCCNFNPQSNLIVSGSFDESVRIWDVRTGK 144 (247)
Q Consensus 115 ~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~ 144 (247)
+.+. .++.-++.+.....++.-|..+..
T Consensus 134 WgLt--~d~~~LimsdGsatL~frdP~tfa 161 (262)
T COG3823 134 WGLT--SDDKNLIMSDGSATLQFRDPKTFA 161 (262)
T ss_pred eeee--cCCcceEeeCCceEEEecCHHHhh
Confidence 3332 334445555555566666665443
No 436
>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118. This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.
Probab=93.96 E-value=2.5 Score=33.31 Aligned_cols=115 Identities=15% Similarity=0.266 Sum_probs=70.8
Q ss_pred EEEEEEcCCCCEEEEeeCCCCEEEEECC------CCeE-EEeecC-----CCCCeEEEEECCCCC------------EEE
Q psy4393 114 VFCCNFNPQSNLIVSGSFDESVRIWDVR------TGKC-LKTLPA-----HSDPVSAVHFNRDGS------------LIV 169 (247)
Q Consensus 114 v~~~~~~~~~~~l~~~~~d~~i~v~d~~------~~~~-~~~~~~-----~~~~i~~~~~~~~~~------------~l~ 169 (247)
-+.++++|.+.+.++....+...+||.. ..+. +..+.. .....+.+.|+.... .++
T Consensus 25 ~WGia~~p~~~~WVadngT~~~TlYdg~~~~~~g~~~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~~g~~~~a~Fi 104 (336)
T TIGR03118 25 AWGLSYRPGGPFWVANTGTGTATLYVGNPDTQPLVQDPLVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSGEGITGPSRFL 104 (336)
T ss_pred cceeEecCCCCEEEecCCcceEEeecCCcccccCCccceEEEecCCCCCCCCCCccEEEEeCCCceEEcCCCcccceeEE
Confidence 4678999999999988888899999986 1222 222321 122455666654322 357
Q ss_pred EecCCCeEEEEeCCCcee---ee-eeccC--CCCCeEEEEECCC--CCEEEEEE-cCCeEEEEECCCc
Q psy4393 170 SSSYDGLCRIWDTASGQC---LK-TLIDD--DNPPVSFVKFSPN--GKYILAAT-LDNTLKLWDSKVV 228 (247)
Q Consensus 170 ~~~~dg~i~v~d~~~~~~---~~-~~~~~--~~~~v~~~~~s~~--~~~l~~~~-~dg~i~vwd~~~~ 228 (247)
.+++||+|.-|...-... .. ..... .......+++... +.+|+.+. ..++|.|||..-.
T Consensus 105 f~tEdGTisaW~p~v~~t~~~~~~~~~d~s~~gavYkGLAi~~~~~~~~LYaadF~~g~IDVFd~~f~ 172 (336)
T TIGR03118 105 FVTEDGTLSGWAPALGTTRMTRAEIVVDASQQGNVYKGLAVGPTGGGDYLYAANFRQGRIDVFKGSFR 172 (336)
T ss_pred EEeCCceEEeecCcCCcccccccEEEEccCCCcceeeeeEEeecCCCceEEEeccCCCceEEecCccc
Confidence 788999999998543222 11 11111 1233455666543 66777665 6799999997644
No 437
>KOG1897|consensus
Probab=93.27 E-value=6.5 Score=35.99 Aligned_cols=192 Identities=12% Similarity=0.152 Sum_probs=107.9
Q ss_pred CCeEEEEECCC-CCEEEEEeC----------CCeEEEEecCCCeEEEEEecc--cCCeEEEEECCCCCEEEEEcCCCeEE
Q psy4393 28 KAVSSVKFSPN-GEWLASSSA----------DKLIKIWGAYDGKFEKTISGH--KLGISDVAWSSDSRLLVSGSDDKTLK 94 (247)
Q Consensus 28 ~~v~~~~~s~~-~~~l~~~~~----------dg~v~iw~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~d~~i~ 94 (247)
..|.++.|..| +.+++.|.. .|.+.++.....+....+..+ .+.+.++..- +|+++ ++-+..|+
T Consensus 775 ~Si~s~~~~~d~~t~~vVGT~~v~Pde~ep~~GRIivfe~~e~~~L~~v~e~~v~Gav~aL~~f-ngkll--A~In~~vr 851 (1096)
T KOG1897|consen 775 LSIISCKFTDDPNTYYVVGTGLVYPDENEPVNGRIIVFEFEELNSLELVAETVVKGAVYALVEF-NGKLL--AGINQSVR 851 (1096)
T ss_pred eeeeeeeecCCCceEEEEEEEeeccCCCCcccceEEEEEEecCCceeeeeeeeeccceeehhhh-CCeEE--EecCcEEE
Confidence 34556668777 566666642 467777777663433333322 3334444322 45544 34567899
Q ss_pred EEECCCceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCe--EEEee-cCCCCCeEEEEECCCCCEEEEe
Q psy4393 95 IWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK--CLKTL-PAHSDPVSAVHFNRDGSLIVSS 171 (247)
Q Consensus 95 v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~--~~~~~-~~~~~~i~~~~~~~~~~~l~~~ 171 (247)
+|++.+++.++.-..+...+..+...-.+..++.|.--+++.+.-.+..+ ..... ..++...+++.+-.+.. ++.+
T Consensus 852 Lye~t~~~eLr~e~~~~~~~~aL~l~v~gdeI~VgDlm~Sitll~y~~~eg~f~evArD~~p~Wmtaveil~~d~-ylga 930 (1096)
T KOG1897|consen 852 LYEWTTERELRIECNISNPIIALDLQVKGDEIAVGDLMRSITLLQYKGDEGNFEEVARDYNPNWMTAVEILDDDT-YLGA 930 (1096)
T ss_pred EEEccccceehhhhcccCCeEEEEEEecCcEEEEeeccceEEEEEEeccCCceEEeehhhCccceeeEEEecCce-EEee
Confidence 99998886666555566677788888889999999988888776554433 22221 13344566666654433 4444
Q ss_pred cCCCeEEEEeCCCc--e--------eeeeecc-------CCCCCeEE--EEECCCCCEEEEEEcCCeEEEE
Q psy4393 172 SYDGLCRIWDTASG--Q--------CLKTLID-------DDNPPVSF--VKFSPNGKYILAATLDNTLKLW 223 (247)
Q Consensus 172 ~~dg~i~v~d~~~~--~--------~~~~~~~-------~~~~~v~~--~~~s~~~~~l~~~~~dg~i~vw 223 (247)
..+|.+.+-...+. + ....+.. .+..-|.. -..+|-+..++.|+.+|.|-+-
T Consensus 931 e~~gNlf~v~~d~~~~td~eR~~l~~~~~~hlGelvn~f~hg~lv~~~~~s~~~~~~~vlfgTv~GsIG~i 1001 (1096)
T KOG1897|consen 931 ENSGNLFTVRKDSDATTDEERQILEEVGKFHLGELVNKFRHGSLVMQLGDSMIPLEPKVLFGTVNGSIGII 1001 (1096)
T ss_pred cccccEEEEEecCCCCchhhhhcccceeeEEeccceeeeeecceEeeccccccCCCCcEEEEEccceEEEE
Confidence 55565554432211 0 0111110 11222222 1234556668899999988765
No 438
>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].
Probab=93.18 E-value=2.1 Score=32.70 Aligned_cols=138 Identities=17% Similarity=0.273 Sum_probs=70.9
Q ss_pred EEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCC---CeEEEEECCCceEEEEEecCC------ccEEEEEEcCC
Q psy4393 52 KIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDD---KTLKIWELSSGKCLKTLKGHS------NYVFCCNFNPQ 122 (247)
Q Consensus 52 ~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~v~d~~~~~~~~~~~~~~------~~v~~~~~~~~ 122 (247)
.+||..+++....-.....-+.+-.+-+||+.+.+|+.. ..+++++..+........... ..-.....-++
T Consensus 49 ~~yD~~tn~~rpl~v~td~FCSgg~~L~dG~ll~tGG~~~G~~~ir~~~p~~~~~~~~w~e~~~~m~~~RWYpT~~~L~D 128 (243)
T PF07250_consen 49 VEYDPNTNTFRPLTVQTDTFCSGGAFLPDGRLLQTGGDNDGNKAIRIFTPCTSDGTCDWTESPNDMQSGRWYPTATTLPD 128 (243)
T ss_pred EEEecCCCcEEeccCCCCCcccCcCCCCCCCEEEeCCCCccccceEEEecCCCCCCCCceECcccccCCCccccceECCC
Confidence 467877665433222122223344577899999888752 357777764411001111111 11112334568
Q ss_pred CCEEEEeeCCCC-EEEEECCCC-e-EEE-eecC------CCCCeEEEEECCCCCEEEEecCCCeEEEEeCCCceeeeee
Q psy4393 123 SNLIVSGSFDES-VRIWDVRTG-K-CLK-TLPA------HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 191 (247)
Q Consensus 123 ~~~l~~~~~d~~-i~v~d~~~~-~-~~~-~~~~------~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~ 191 (247)
|+.++.|+.... ..+|.-+.. . ... .+.. ...----+...|+|++++.+..+. .+||..+.+.++.+
T Consensus 129 G~vlIvGG~~~~t~E~~P~~~~~~~~~~~~~l~~~~~~~~~nlYP~~~llPdG~lFi~an~~s--~i~d~~~n~v~~~l 205 (243)
T PF07250_consen 129 GRVLIVGGSNNPTYEFWPPKGPGPGPVTLPFLSQTSDTLPNNLYPFVHLLPDGNLFIFANRGS--IIYDYKTNTVVRTL 205 (243)
T ss_pred CCEEEEeCcCCCcccccCCccCCCCceeeecchhhhccCccccCceEEEcCCCCEEEEEcCCc--EEEeCCCCeEEeeC
Confidence 999988887643 334443211 1 111 1110 001112356789999998887654 46788877665554
No 439
>PLN00033 photosystem II stability/assembly factor; Provisional
Probab=92.84 E-value=4.8 Score=33.34 Aligned_cols=146 Identities=17% Similarity=0.201 Sum_probs=79.0
Q ss_pred eEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCce-----EE
Q psy4393 30 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGK-----CL 104 (247)
Q Consensus 30 v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~-----~~ 104 (247)
...+..+++|.+++.+.....++-|+.-.......-......+..+.|.+++..++++ ..|.+. +....++ ..
T Consensus 241 f~~v~~~~dG~~~~vg~~G~~~~s~d~G~~~W~~~~~~~~~~l~~v~~~~dg~l~l~g-~~G~l~-~S~d~G~~~~~~~f 318 (398)
T PLN00033 241 FSTVNRSPDGDYVAVSSRGNFYLTWEPGQPYWQPHNRASARRIQNMGWRADGGLWLLT-RGGGLY-VSKGTGLTEEDFDF 318 (398)
T ss_pred eeeEEEcCCCCEEEEECCccEEEecCCCCcceEEecCCCccceeeeeEcCCCCEEEEe-CCceEE-EecCCCCcccccce
Confidence 4455667888777765433222333321111122223335568899999998877665 556653 3444443 12
Q ss_pred EEEec--CCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeec---CCCCCeEEEEECCCCCEEEEecCCCeEEE
Q psy4393 105 KTLKG--HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLP---AHSDPVSAVHFNRDGSLIVSSSYDGLCRI 179 (247)
Q Consensus 105 ~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~---~~~~~i~~~~~~~~~~~l~~~~~dg~i~v 179 (247)
..... ....+..+.+.++++.+++| ..|.+... ...++.-...+ .-....+.+.|.++++.+++| .+|.|.-
T Consensus 319 ~~~~~~~~~~~l~~v~~~~d~~~~a~G-~~G~v~~s-~D~G~tW~~~~~~~~~~~~ly~v~f~~~~~g~~~G-~~G~il~ 395 (398)
T PLN00033 319 EEADIKSRGFGILDVGYRSKKEAWAAG-GSGILLRS-TDGGKSWKRDKGADNIAANLYSVKFFDDKKGFVLG-NDGVLLR 395 (398)
T ss_pred eecccCCCCcceEEEEEcCCCcEEEEE-CCCcEEEe-CCCCcceeEccccCCCCcceeEEEEcCCCceEEEe-CCcEEEE
Confidence 22221 12347778888887766665 55655544 23444333322 123457788887777766655 5776544
Q ss_pred E
Q psy4393 180 W 180 (247)
Q Consensus 180 ~ 180 (247)
|
T Consensus 396 ~ 396 (398)
T PLN00033 396 Y 396 (398)
T ss_pred e
Confidence 3
No 440
>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []). The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].
Probab=92.82 E-value=1.8 Score=31.23 Aligned_cols=30 Identities=23% Similarity=0.368 Sum_probs=25.0
Q ss_pred CCeEEEEECCCC------CEEEEEEcCCeEEEEECC
Q psy4393 197 PPVSFVKFSPNG------KYILAATLDNTLKLWDSK 226 (247)
Q Consensus 197 ~~v~~~~~s~~~------~~l~~~~~dg~i~vwd~~ 226 (247)
..+..++|||.| .+|++.+.+|.|.||...
T Consensus 86 ~~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~ 121 (173)
T PF12657_consen 86 SQVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPP 121 (173)
T ss_pred ccEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecC
Confidence 368889999954 488889999999999865
No 441
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=92.48 E-value=1.3 Score=33.28 Aligned_cols=66 Identities=18% Similarity=0.301 Sum_probs=45.0
Q ss_pred ECCCCCEEEEEeCCCeEEEEecCCCeEEEE-------Ee-------cccCCeEEEEECCCCCEEEEEcCCCeEEEEECCC
Q psy4393 35 FSPNGEWLASSSADKLIKIWGAYDGKFEKT-------IS-------GHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSS 100 (247)
Q Consensus 35 ~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~-------~~-------~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~ 100 (247)
+..++.+|++.+.+|.+++||+.+.+.... +. .....|..+.++.+|.-+++-+ +|..+.|+..-
T Consensus 18 l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls-ng~~y~y~~~L 96 (219)
T PF07569_consen 18 LECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS-NGDSYSYSPDL 96 (219)
T ss_pred EEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe-CCCEEEecccc
Confidence 445788898889999999999987665322 11 2334577777777777666554 46677777653
Q ss_pred c
Q psy4393 101 G 101 (247)
Q Consensus 101 ~ 101 (247)
+
T Consensus 97 ~ 97 (219)
T PF07569_consen 97 G 97 (219)
T ss_pred c
Confidence 3
No 442
>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []). The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].
Probab=92.46 E-value=1.9 Score=31.04 Aligned_cols=30 Identities=13% Similarity=0.329 Sum_probs=24.4
Q ss_pred CeEEEEECCCC------CEEEEecCCCeEEEEeCCC
Q psy4393 155 PVSAVHFNRDG------SLIVSSSYDGLCRIWDTAS 184 (247)
Q Consensus 155 ~i~~~~~~~~~------~~l~~~~~dg~i~v~d~~~ 184 (247)
.+..++|+|.| -+|++-+.++.+.+|....
T Consensus 87 ~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~~ 122 (173)
T PF12657_consen 87 QVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPPG 122 (173)
T ss_pred cEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecCC
Confidence 68889999954 3788889999999997653
No 443
>KOG1916|consensus
Probab=92.34 E-value=0.16 Score=45.29 Aligned_cols=112 Identities=16% Similarity=0.320 Sum_probs=63.0
Q ss_pred EECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEE-----------EECCCCCEEEEEcCCCeEEEEECCC-c
Q psy4393 34 KFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV-----------AWSSDSRLLVSGSDDKTLKIWELSS-G 101 (247)
Q Consensus 34 ~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~-----------~~~~~~~~l~~~~~d~~i~v~d~~~-~ 101 (247)
-|.++.-++..+-.++.+++........ ..+.+|...+.++ ..+|||..+++++.||.++.|.+.- +
T Consensus 190 p~~~~~~~ic~~~~~~~i~lL~~~ra~~-~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Qiyi~g 268 (1283)
T KOG1916|consen 190 PIAVNKVYICYGLKGGEIRLLNINRALR-SLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVGFYQIYITG 268 (1283)
T ss_pred ccccccceeeeccCCCceeEeeechHHH-HHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCccceeeeeeec
Confidence 3344555666666778888765432211 2233344444333 3589999999999999998887642 2
Q ss_pred ----eEEEEEecCCc-cEEEEEEcCCC---------CEEEEe-eCCCCEEEEECCCCeEE
Q psy4393 102 ----KCLKTLKGHSN-YVFCCNFNPQS---------NLIVSG-SFDESVRIWDVRTGKCL 146 (247)
Q Consensus 102 ----~~~~~~~~~~~-~v~~~~~~~~~---------~~l~~~-~~d~~i~v~d~~~~~~~ 146 (247)
.++...+.|++ +-.|..++.+. .+.+++ ..++.+++|.....+++
T Consensus 269 ~~~~rclhewkphd~~p~vC~lc~~~~~~~v~i~~w~~~Itttd~nre~k~w~~a~w~Cl 328 (1283)
T KOG1916|consen 269 KIVHRCLHEWKPHDKHPRVCWLCHKQEILVVSIGKWVLRITTTDVNREEKFWAEAPWQCL 328 (1283)
T ss_pred cccHhhhhccCCCCCCCceeeeeccccccCCccceeEEEEecccCCcceeEeeccchhhh
Confidence 34445555553 22222222111 233443 44567888887666654
No 444
>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]
Probab=92.34 E-value=0.78 Score=37.95 Aligned_cols=159 Identities=12% Similarity=0.079 Sum_probs=87.6
Q ss_pred CCCCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEE-E-ecccC----CeE-EEEECCCCCEEEEEcCCCeEEEE-E
Q psy4393 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT-I-SGHKL----GIS-DVAWSSDSRLLVSGSDDKTLKIW-E 97 (247)
Q Consensus 26 h~~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~-~-~~~~~----~v~-~~~~~~~~~~l~~~~~d~~i~v~-d 97 (247)
-...|..+-..|||+.|+.-+. ..+.+++..+...... + ....+ .|+ .+..-..|.-+++.+.||.|.-| |
T Consensus 219 ~~~~v~qllL~Pdg~~LYv~~g-~~~~v~~L~~r~l~~rkl~~dspg~~~~~Vte~l~lL~Gg~SLLv~~~dG~vsQWFd 297 (733)
T COG4590 219 PFSDVSQLLLTPDGKTLYVRTG-SELVVALLDKRSLQIRKLVDDSPGDSRHQVTEQLYLLSGGFSLLVVHEDGLVSQWFD 297 (733)
T ss_pred CccchHhhEECCCCCEEEEecC-CeEEEEeecccccchhhhhhcCCCchHHHHHHHHHHHhCceeEEEEcCCCceeeeee
Confidence 3466778889999998876443 5677887754432211 1 11011 121 11122345567888899988877 4
Q ss_pred CCCc-e----EEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEec
Q psy4393 98 LSSG-K----CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSS 172 (247)
Q Consensus 98 ~~~~-~----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 172 (247)
...+ . .++.++-....+..+.-..+.+-+++-...|.+.++.....+.+-...... ...-++++|++.++++-
T Consensus 298 vr~~~~p~l~h~R~f~l~pa~~~~l~pe~~rkgF~~l~~~G~L~~f~st~~~~lL~~~~~~-~~~~~~~Sp~~~~Ll~e- 375 (733)
T COG4590 298 VRRDGQPHLNHIRNFKLAPAEVQFLLPETNRKGFYSLYRNGTLQSFYSTSEKLLLFERAYQ-APQLVAMSPNQAYLLSE- 375 (733)
T ss_pred eecCCCCcceeeeccccCcccceeeccccccceEEEEcCCCceeeeecccCcceehhhhhc-CcceeeeCcccchheee-
Confidence 4332 1 112222222223222222233456666777888777655444332222222 45567899999988764
Q ss_pred CCCeEEEEeCCCcee
Q psy4393 173 YDGLCRIWDTASGQC 187 (247)
Q Consensus 173 ~dg~i~v~d~~~~~~ 187 (247)
..|.++++.+++..+
T Consensus 376 ~~gki~~~~l~Nr~P 390 (733)
T COG4590 376 DQGKIRLAQLENRNP 390 (733)
T ss_pred cCCceEEEEecCCCC
Confidence 467888888776543
No 445
>COG1520 FOG: WD40-like repeat [Function unknown]
Probab=92.27 E-value=5.5 Score=32.59 Aligned_cols=105 Identities=14% Similarity=0.118 Sum_probs=61.4
Q ss_pred CEEEEEcCCCeEEEEECCCceEEEEEecCC--ccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCC-CCeEE
Q psy4393 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHS--NYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHS-DPVSA 158 (247)
Q Consensus 82 ~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~-~~i~~ 158 (247)
..+.++..+|.+.-.|..++..+....... ..+..-....+|+ ++.++.++.++.+|.++|+.+....... ..+..
T Consensus 69 g~v~~~~~~G~i~A~d~~~g~~~W~~~~~~~~~~~~~~~~~~~G~-i~~g~~~g~~y~ld~~~G~~~W~~~~~~~~~~~~ 147 (370)
T COG1520 69 GTVYVGTRDGNIFALNPDTGLVKWSYPLLGAVAQLSGPILGSDGK-IYVGSWDGKLYALDASTGTLVWSRNVGGSPYYAS 147 (370)
T ss_pred CeEEEecCCCcEEEEeCCCCcEEecccCcCcceeccCceEEeCCe-EEEecccceEEEEECCCCcEEEEEecCCCeEEec
Confidence 345566778888888888877543222111 1111111222454 7778888899999998898877766544 11111
Q ss_pred EEECCCCCEEEEecCCCeEEEEeCCCceee
Q psy4393 159 VHFNRDGSLIVSSSYDGLCRIWDTASGQCL 188 (247)
Q Consensus 159 ~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~ 188 (247)
-..-.++. +..++.++.+...|..+++.+
T Consensus 148 ~~v~~~~~-v~~~s~~g~~~al~~~tG~~~ 176 (370)
T COG1520 148 PPVVGDGT-VYVGTDDGHLYALNADTGTLK 176 (370)
T ss_pred CcEEcCcE-EEEecCCCeEEEEEccCCcEE
Confidence 12222333 344446788888888877653
No 446
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=92.14 E-value=4.5 Score=31.28 Aligned_cols=158 Identities=15% Similarity=0.095 Sum_probs=91.8
Q ss_pred eEEEEECCCCCEEEEEcCCC--eEEEEECCCceEEEEEecCCc-cEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEe
Q psy4393 72 ISDVAWSSDSRLLVSGSDDK--TLKIWELSSGKCLKTLKGHSN-YVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKT 148 (247)
Q Consensus 72 v~~~~~~~~~~~l~~~~~d~--~i~v~d~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~ 148 (247)
...+.|..+|.++-+.+.-| .|+.+|+.+++......-... .-..+.... ..+....-.++...+||..+.+.+..
T Consensus 47 TQGL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~~-d~l~qLTWk~~~~f~yd~~tl~~~~~ 125 (264)
T PF05096_consen 47 TQGLEFLDDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGITILG-DKLYQLTWKEGTGFVYDPNTLKKIGT 125 (264)
T ss_dssp EEEEEEEETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEEEET-TEEEEEESSSSEEEEEETTTTEEEEE
T ss_pred CccEEecCCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCccccceeEEEEC-CEEEEEEecCCeEEEEccccceEEEE
Confidence 44577767788777877766 789999999987655442221 112233332 23333445678889999999888877
Q ss_pred ecCCCCCeEEEEECCCCCEEEEecCCCeEEEEeCCCceeeeeeccC-CC---CCeEEEEECCCCCEEEEEEcCCeEEEEE
Q psy4393 149 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD-DN---PPVSFVKFSPNGKYILAATLDNTLKLWD 224 (247)
Q Consensus 149 ~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~-~~---~~v~~~~~s~~~~~l~~~~~dg~i~vwd 224 (247)
+.-. +.=..++ .++..|+.......+.++|..+-+....+... .. ..++-+.+- +|...|=.=....|..-|
T Consensus 126 ~~y~-~EGWGLt--~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE~i-~G~IyANVW~td~I~~Id 201 (264)
T PF05096_consen 126 FPYP-GEGWGLT--SDGKRLIMSDGSSRLYFLDPETFKEVRTIQVTDNGRPVSNLNELEYI-NGKIYANVWQTDRIVRID 201 (264)
T ss_dssp EE-S-SS--EEE--ECSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EETTEE---EEEEEEE-TTEEEEEETTSSEEEEEE
T ss_pred EecC-CcceEEE--cCCCEEEEECCccceEEECCcccceEEEEEEEECCEECCCcEeEEEE-cCEEEEEeCCCCeEEEEe
Confidence 7543 2334555 45666777666778999998876655544221 12 234556664 444333333566777778
Q ss_pred CCCcceEEEE
Q psy4393 225 SKVVTPAIIC 234 (247)
Q Consensus 225 ~~~~~~~~~~ 234 (247)
..++.....+
T Consensus 202 p~tG~V~~~i 211 (264)
T PF05096_consen 202 PETGKVVGWI 211 (264)
T ss_dssp TTT-BEEEEE
T ss_pred CCCCeEEEEE
Confidence 7777766554
No 447
>KOG2377|consensus
Probab=92.03 E-value=6.4 Score=32.89 Aligned_cols=127 Identities=12% Similarity=0.195 Sum_probs=77.3
Q ss_pred CccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEE----EeecCCCCCeEEEEECCCCCEEEEecCCCeEEEEeCCCce
Q psy4393 111 SNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCL----KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 186 (247)
Q Consensus 111 ~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~----~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~ 186 (247)
.+.|.++.|++|.+.+|.-..+..|.+++....+.. ..-+.....|....|+.+.. +|.....| +.+|.....+
T Consensus 66 ~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~~~~~ck~k~~~IlGF~W~~s~e-~A~i~~~G-~e~y~v~pek 143 (657)
T KOG2377|consen 66 KGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLEYTQECKTKNANILGFCWTSSTE-IAFITDQG-IEFYQVLPEK 143 (657)
T ss_pred CCceeEEEeccCcceEEEEecCceEEEEecCCCchhhHHHHHhccCcceeEEEEEecCee-EEEEecCC-eEEEEEchhh
Confidence 457999999999999999999999999987443321 12234445688888887644 44444333 5566544332
Q ss_pred eeeeeccCCCCCeEEEEECCCCCEEEEEEc--CCeEEEEECCCc----ceEEEEccCCc
Q psy4393 187 CLKTLIDDDNPPVSFVKFSPNGKYILAATL--DNTLKLWDSKVV----TPAIICSTPLN 239 (247)
Q Consensus 187 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~--dg~i~vwd~~~~----~~~~~~~~~~~ 239 (247)
..-++...+...|+...|.++.+.++.++. .+.+.=+..+++ -|......|..
T Consensus 144 rslRlVks~~~nvnWy~yc~et~v~LL~t~~~~n~lnpf~~~~~~v~kLPkfe~~~p~~ 202 (657)
T KOG2377|consen 144 RSLRLVKSHNLNVNWYMYCPETAVILLSTTVLENVLNPFHFRAGTMSKLPKFEIELPAA 202 (657)
T ss_pred hhhhhhhhcccCccEEEEccccceEeeeccccccccccEEEeeceeeeccceeecCCCC
Confidence 222333445566777888888876655543 344444444433 35445444444
No 448
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=91.94 E-value=8.7 Score=34.23 Aligned_cols=142 Identities=13% Similarity=0.117 Sum_probs=84.0
Q ss_pred CCEEEEEeCCCeEEEEecCCCeEEE------EEe----------------cccCCeEEEEECC--CCCEEEEEcCCCeEE
Q psy4393 39 GEWLASSSADKLIKIWGAYDGKFEK------TIS----------------GHKLGISDVAWSS--DSRLLVSGSDDKTLK 94 (247)
Q Consensus 39 ~~~l~~~~~dg~v~iw~~~~~~~~~------~~~----------------~~~~~v~~~~~~~--~~~~l~~~~~d~~i~ 94 (247)
+++++.|. .+.|.||+........ .+. .....|+-|.... ....|+.+.+||.|.
T Consensus 49 ~n~LFiA~-~s~I~Vy~~d~l~~~p~~~p~~~~~t~p~~~~~~D~~~s~~p~PHtIN~i~v~~lg~~EVLl~c~DdG~V~ 127 (717)
T PF08728_consen 49 RNLLFIAY-QSEIYVYDPDGLTQLPSRKPCLRFDTKPEFTSTPDRLISTWPFPHTINFIKVGDLGGEEVLLLCTDDGDVL 127 (717)
T ss_pred CCEEEEEE-CCEEEEEecCCcccccccccccccccCccccccccccccCCCCCceeeEEEecccCCeeEEEEEecCCeEE
Confidence 66676654 7789999864321110 000 0111244443332 345788899999999
Q ss_pred EEECCC-------c----e---------EEEEEecCCccEEEEEEc--CCCCEEEEeeCCCCEEEEECCCC--eE-EEee
Q psy4393 95 IWELSS-------G----K---------CLKTLKGHSNYVFCCNFN--PQSNLIVSGSFDESVRIWDVRTG--KC-LKTL 149 (247)
Q Consensus 95 v~d~~~-------~----~---------~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~d~~i~v~d~~~~--~~-~~~~ 149 (247)
+|.+++ . . +...++ -...++.++++ ...++||+++....|.||-.... +. ...-
T Consensus 128 ~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~-v~~SaWGLdIh~~~~~rlIAVSsNs~~VTVFaf~l~~~r~~~~~s 206 (717)
T PF08728_consen 128 AYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLR-VGASAWGLDIHDYKKSRLIAVSSNSQEVTVFAFALVDERFYHVPS 206 (717)
T ss_pred EEEHHHHHHHHHhhccccccccccccCCCCeEee-cCCceeEEEEEecCcceEEEEecCCceEEEEEEeccccccccccc
Confidence 997632 0 0 011112 12357888887 77788888888888888754331 11 1111
Q ss_pred cCCCCCeEEEEECCCC------CEEEEecCCCeEEEEeC
Q psy4393 150 PAHSDPVSAVHFNRDG------SLIVSSSYDGLCRIWDT 182 (247)
Q Consensus 150 ~~~~~~i~~~~~~~~~------~~l~~~~~dg~i~v~d~ 182 (247)
..+..-|.++.|-++. ..+++++-.|.+.+|++
T Consensus 207 ~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I 245 (717)
T PF08728_consen 207 HQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI 245 (717)
T ss_pred cccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence 1244567788886643 27778888998888776
No 449
>KOG1900|consensus
Probab=91.85 E-value=6.7 Score=37.00 Aligned_cols=136 Identities=16% Similarity=0.339 Sum_probs=79.2
Q ss_pred eCCCeEEEEecCCCeEEEEEecccCCeEEEE--------ECCCCCEEEEEcCCCeEEEEECC----CceE---E--EEEe
Q psy4393 46 SADKLIKIWGAYDGKFEKTISGHKLGISDVA--------WSSDSRLLVSGSDDKTLKIWELS----SGKC---L--KTLK 108 (247)
Q Consensus 46 ~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~--------~~~~~~~l~~~~~d~~i~v~d~~----~~~~---~--~~~~ 108 (247)
+.|..+.+|+..++.....+.+-...|..+. |-|.=++++..+.--.|.++-+. ++.. . ..+.
T Consensus 96 TiDn~L~lWny~~~~e~~~~d~~shtIl~V~LvkPkpgvFv~~IqhlLvvaT~~ei~ilgV~~~~~~~~~~~f~~~~~i~ 175 (1311)
T KOG1900|consen 96 TIDNNLFLWNYESDNELAEYDGLSHTILKVGLVKPKPGVFVPEIQHLLVVATPVEIVILGVSFDEFTGELSIFNTSFKIS 175 (1311)
T ss_pred EeCCeEEEEEcCCCCccccccchhhhheeeeeecCCCCcchhhhheeEEecccceEEEEEEEeccccCcccccccceeee
Confidence 4588999999987655555544444444332 22333344433333445454332 1111 0 1222
Q ss_pred cCCccEEEEEEcCCCCEEEEeeCCCCEEEEEC----CCC---e-E----------------EEeec-CCCCCeEEEEECC
Q psy4393 109 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV----RTG---K-C----------------LKTLP-AHSDPVSAVHFNR 163 (247)
Q Consensus 109 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~----~~~---~-~----------------~~~~~-~~~~~i~~~~~~~ 163 (247)
.....|.++....+|+.+++| .||. +|.+ ..+ + + +..+. .+..+|..+.++.
T Consensus 176 ~dg~~V~~I~~t~nGRIF~~G-~dg~--lyEl~Yq~~~gWf~~rc~Kiclt~s~ls~lvPs~~~~~~~~~dpI~qi~ID~ 252 (1311)
T KOG1900|consen 176 VDGVSVNCITYTENGRIFFAG-RDGN--LYELVYQAEDGWFGSRCRKICLTKSVLSSLVPSLLSVPGSSKDPIRQITIDN 252 (1311)
T ss_pred cCCceEEEEEeccCCcEEEee-cCCC--EEEEEEeccCchhhcccccccCchhHHHHhhhhhhcCCCCCCCcceeeEecc
Confidence 234457888877778777765 4554 4443 111 0 0 11222 4466899999998
Q ss_pred CCCEEEEecCCCeEEEEeCCC
Q psy4393 164 DGSLIVSSSYDGLCRIWDTAS 184 (247)
Q Consensus 164 ~~~~l~~~~~dg~i~v~d~~~ 184 (247)
....+++=+..|.+.+||+..
T Consensus 253 SR~IlY~lsek~~v~~Y~i~~ 273 (1311)
T KOG1900|consen 253 SRNILYVLSEKGTVSAYDIGG 273 (1311)
T ss_pred ccceeeeeccCceEEEEEccC
Confidence 888999999999999999976
No 450
>COG1520 FOG: WD40-like repeat [Function unknown]
Probab=91.70 E-value=6.4 Score=32.19 Aligned_cols=192 Identities=15% Similarity=0.050 Sum_probs=97.9
Q ss_pred EEEEEeCCCeEEEEecCCCeEEEEEeccc--CCeEEEEECCCCCEEEEEcCCCeEEEEECCCceEEEEEecCC-ccEEEE
Q psy4393 41 WLASSSADKLIKIWGAYDGKFEKTISGHK--LGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHS-NYVFCC 117 (247)
Q Consensus 41 ~l~~~~~dg~v~iw~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~-~~v~~~ 117 (247)
.++++..+|.+.-.|..++..+....... ..+..-.+..+|+ ++.++.++.+..+|..+++......... ..+...
T Consensus 70 ~v~~~~~~G~i~A~d~~~g~~~W~~~~~~~~~~~~~~~~~~~G~-i~~g~~~g~~y~ld~~~G~~~W~~~~~~~~~~~~~ 148 (370)
T COG1520 70 TVYVGTRDGNIFALNPDTGLVKWSYPLLGAVAQLSGPILGSDGK-IYVGSWDGKLYALDASTGTLVWSRNVGGSPYYASP 148 (370)
T ss_pred eEEEecCCCcEEEEeCCCCcEEecccCcCcceeccCceEEeCCe-EEEecccceEEEEECCCCcEEEEEecCCCeEEecC
Confidence 34445677877777777776554322211 1222222223555 7778888888889998888776665444 111111
Q ss_pred EEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCC---CeEEEEECCCCCEEEEecC--CCeEEEEeCCCceeeeeec
Q psy4393 118 NFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSD---PVSAVHFNRDGSLIVSSSY--DGLCRIWDTASGQCLKTLI 192 (247)
Q Consensus 118 ~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~---~i~~~~~~~~~~~l~~~~~--dg~i~v~d~~~~~~~~~~~ 192 (247)
..-.++ .+..++.++.+...|..+++.......... .+..-....++ .++.+.. ++.+.-.|+.+++..-...
T Consensus 149 ~v~~~~-~v~~~s~~g~~~al~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~vy~~~~~~~~~~~a~~~~~G~~~w~~~ 226 (370)
T COG1520 149 PVVGDG-TVYVGTDDGHLYALNADTGTLKWTYETPAPLSLSIYGSPAIASG-TVYVGSDGYDGILYALNAEDGTLKWSQK 226 (370)
T ss_pred cEEcCc-EEEEecCCCeEEEEEccCCcEEEEEecCCccccccccCceeecc-eEEEecCCCcceEEEEEccCCcEeeeee
Confidence 222232 344444778898888888887655433221 11100011223 3444444 5567777777766443210
Q ss_pred ----cCCC-----CCeEEEEECCCCCEEEEEEcCCeEEEEECCCcceEEEEcc
Q psy4393 193 ----DDDN-----PPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICST 236 (247)
Q Consensus 193 ----~~~~-----~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~ 236 (247)
.... ..+..-...- +.-++.++.++.+.-.|..+++++=.+..
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~v~v-~~~~~~~~~~g~~~~l~~~~G~~~W~~~~ 278 (370)
T COG1520 227 VSQTIGRTAISTTPAVDGGPVYV-DGGVYAGSYGGKLLCLDADTGELIWSFPA 278 (370)
T ss_pred eecccCcccccccccccCceEEE-CCcEEEEecCCeEEEEEcCCCceEEEEec
Confidence 0100 0000000001 12235556667677777777766655554
No 451
>KOG2247|consensus
Probab=91.51 E-value=0.029 Score=46.25 Aligned_cols=136 Identities=9% Similarity=0.194 Sum_probs=86.1
Q ss_pred EEEEECCCCCEEEEEcCCCeEEEEECCCceEEEEEecCCccEEEEEEcCCCCEE-EEeeCCCCEEEEECCCCeEEEeecC
Q psy4393 73 SDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLI-VSGSFDESVRIWDVRTGKCLKTLPA 151 (247)
Q Consensus 73 ~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~v~d~~~~~~~~~~~~ 151 (247)
....|.|.+..++.++.+..+..||-.. +...... .......++|+-++..+ +.+-..+.+.+||+.+.....-...
T Consensus 38 i~~~w~~e~~nlavaca~tiv~~YD~ag-q~~le~n-~tg~aldm~wDkegdvlavlAek~~piylwd~n~eytqqLE~g 115 (615)
T KOG2247|consen 38 IIHRWRPEGHNLAVACANTIVIYYDKAG-QVILELN-PTGKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEYTQQLESG 115 (615)
T ss_pred ceeeEecCCCceehhhhhhHHHhhhhhc-ceecccC-CchhHhhhhhccccchhhhhhhcCCCeeechhhhhhHHHHhcc
Confidence 3467888777788888888888888543 3222222 23344567787766554 4456778999999975432111111
Q ss_pred CCCCeEEEEECCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEE
Q psy4393 152 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 211 (247)
Q Consensus 152 ~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 211 (247)
....-.-+.|++.+..++.+...|.+.+++..+.+.... ...+...+.++++.+.+..+
T Consensus 116 g~~s~sll~wsKg~~el~ig~~~gn~viynhgtsR~iiv-~Gkh~RRgtq~av~lEd~vi 174 (615)
T KOG2247|consen 116 GTSSKSLLAWSKGTPELVIGNNAGNIVIYNHGTSRRIIV-MGKHQRRGTQIAVTLEDYVI 174 (615)
T ss_pred CcchHHHHhhccCCccccccccccceEEEeccchhhhhh-hcccccceeEEEecccceee
Confidence 111122267888888888888999999998876543322 22355667888888876433
No 452
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=91.29 E-value=1.8 Score=37.43 Aligned_cols=38 Identities=13% Similarity=0.298 Sum_probs=28.7
Q ss_pred CeEEEEECC----CCCEEEEEEcCCeEEEEECCCcceEEEEc
Q psy4393 198 PVSFVKFSP----NGKYILAATLDNTLKLWDSKVVTPAIICS 235 (247)
Q Consensus 198 ~v~~~~~s~----~~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 235 (247)
....+++++ +..+|++.+.|+++|+||.++...+.+..
T Consensus 216 ~~~~~~~~~~~~~~~~~l~tl~~D~~LRiW~l~t~~~~~~~~ 257 (547)
T PF11715_consen 216 VAASLAVSSSEINDDTFLFTLSRDHTLRIWSLETGQCLATID 257 (547)
T ss_dssp -EEEEEE-----ETTTEEEEEETTSEEEEEETTTTCEEEEEE
T ss_pred ccceEEEecceeCCCCEEEEEeCCCeEEEEECCCCeEEEEec
Confidence 345566666 77899999999999999999998865543
No 453
>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118. This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.
Probab=91.05 E-value=6.5 Score=31.06 Aligned_cols=198 Identities=13% Similarity=0.204 Sum_probs=106.5
Q ss_pred eEEEEECCCCCEEEEEeCCCeEEEEecC------CC-eEEEEEec-----ccCCeEEEEECCCCC------------EEE
Q psy4393 30 VSSVKFSPNGEWLASSSADKLIKIWGAY------DG-KFEKTISG-----HKLGISDVAWSSDSR------------LLV 85 (247)
Q Consensus 30 v~~~~~s~~~~~l~~~~~dg~v~iw~~~------~~-~~~~~~~~-----~~~~v~~~~~~~~~~------------~l~ 85 (247)
-..++|+|.+.+-++....+...+||.. .. ..+..+.. .....+.+.|+.... .++
T Consensus 25 ~WGia~~p~~~~WVadngT~~~TlYdg~~~~~~g~~~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~~g~~~~a~Fi 104 (336)
T TIGR03118 25 AWGLSYRPGGPFWVANTGTGTATLYVGNPDTQPLVQDPLVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSGEGITGPSRFL 104 (336)
T ss_pred cceeEecCCCCEEEecCCcceEEeecCCcccccCCccceEEEecCCCCCCCCCCccEEEEeCCCceEEcCCCcccceeEE
Confidence 3578999998877777778899999975 11 12222221 123466777764332 256
Q ss_pred EEcCCCeEEEEECCCceE-----EEEEecC-CccEE-EEEEc--CCCCEEEEe-eCCCCEEEEECCCCeEEE--ee----
Q psy4393 86 SGSDDKTLKIWELSSGKC-----LKTLKGH-SNYVF-CCNFN--PQSNLIVSG-SFDESVRIWDVRTGKCLK--TL---- 149 (247)
Q Consensus 86 ~~~~d~~i~v~d~~~~~~-----~~~~~~~-~~~v~-~~~~~--~~~~~l~~~-~~d~~i~v~d~~~~~~~~--~~---- 149 (247)
.++++|+|.-|...-... ...+... ...+. .+++. ..+.+|+.. -..++|.+||-.-.+... .+
T Consensus 105 f~tEdGTisaW~p~v~~t~~~~~~~~~d~s~~gavYkGLAi~~~~~~~~LYaadF~~g~IDVFd~~f~~~~~~g~F~DP~ 184 (336)
T TIGR03118 105 FVTEDGTLSGWAPALGTTRMTRAEIVVDASQQGNVYKGLAVGPTGGGDYLYAANFRQGRIDVFKGSFRPPPLPGSFIDPA 184 (336)
T ss_pred EEeCCceEEeecCcCCcccccccEEEEccCCCcceeeeeEEeecCCCceEEEeccCCCceEEecCccccccCCCCccCCC
Confidence 778999999998532221 1112111 12222 23333 334555544 457889999864322110 01
Q ss_pred -cCCCCC-----------eEEEEECCCCCEEEEecCCCeEEEEeCCCceeeeeeccCC--CCCeEEEEECC------CCC
Q psy4393 150 -PAHSDP-----------VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD--NPPVSFVKFSP------NGK 209 (247)
Q Consensus 150 -~~~~~~-----------i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~--~~~v~~~~~s~------~~~ 209 (247)
.+.-.+ |+-..-.++...=+.|..-|.|.+||+. ++.++++.... +.+ ..++..| .|.
T Consensus 185 iPagyAPFnIqnig~~lyVtYA~qd~~~~d~v~G~G~G~VdvFd~~-G~l~~r~as~g~LNaP-WG~a~APa~FG~~sg~ 262 (336)
T TIGR03118 185 LPAGYAPFNVQNLGGTLYVTYAQQDADRNDEVAGAGLGYVNVFTLN-GQLLRRVASSGRLNAP-WGLAIAPESFGSLSGA 262 (336)
T ss_pred CCCCCCCcceEEECCeEEEEEEecCCcccccccCCCcceEEEEcCC-CcEEEEeccCCcccCC-ceeeeChhhhCCCCCC
Confidence 111111 1111122222222333445789999976 45555553221 222 2344433 577
Q ss_pred EEEEEEcCCeEEEEECCCcc
Q psy4393 210 YILAATLDNTLKLWDSKVVT 229 (247)
Q Consensus 210 ~l~~~~~dg~i~vwd~~~~~ 229 (247)
+|+.---||+|..||..++.
T Consensus 263 lLVGNFGDG~InaFD~~sG~ 282 (336)
T TIGR03118 263 LLVGNFGDGTINAYDPQSGA 282 (336)
T ss_pred eEEeecCCceeEEecCCCCc
Confidence 88877789999999987654
No 454
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=90.76 E-value=5.2 Score=35.55 Aligned_cols=104 Identities=13% Similarity=0.139 Sum_probs=63.3
Q ss_pred CCCEEEEeeCCCCEEEEECCC-------C----e---------EEEeecCCCCCeEEEEEC--CCCCEEEEecCCCeEEE
Q psy4393 122 QSNLIVSGSFDESVRIWDVRT-------G----K---------CLKTLPAHSDPVSAVHFN--RDGSLIVSSSYDGLCRI 179 (247)
Q Consensus 122 ~~~~l~~~~~d~~i~v~d~~~-------~----~---------~~~~~~~~~~~i~~~~~~--~~~~~l~~~~~dg~i~v 179 (247)
+...|+.+..||.|.+|.+.. . . +...+.. ...++.++++ ...+++|+++....|.|
T Consensus 113 ~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~v-~~SaWGLdIh~~~~~rlIAVSsNs~~VTV 191 (717)
T PF08728_consen 113 GEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLRV-GASAWGLDIHDYKKSRLIAVSSNSQEVTV 191 (717)
T ss_pred CeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEeec-CCceeEEEEEecCcceEEEEecCCceEEE
Confidence 456788899999999996521 0 0 1122222 3467889998 77788888887777777
Q ss_pred EeCCCc--eeeeeeccCCCCCeEEEEECCC-----CC-EEEEEEcCCeEEEEECC
Q psy4393 180 WDTASG--QCLKTLIDDDNPPVSFVKFSPN-----GK-YILAATLDNTLKLWDSK 226 (247)
Q Consensus 180 ~d~~~~--~~~~~~~~~~~~~v~~~~~s~~-----~~-~l~~~~~dg~i~vwd~~ 226 (247)
|-.... +....-.......|.+++|-++ |. +|++++-.|.+.+|+.+
T Consensus 192 Faf~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I~ 246 (717)
T PF08728_consen 192 FAFALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKIK 246 (717)
T ss_pred EEEeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEEE
Confidence 754332 1111101112223445555443 32 78889999999998873
No 455
>PF13449 Phytase-like: Esterase-like activity of phytase
Probab=90.75 E-value=7.5 Score=31.24 Aligned_cols=143 Identities=15% Similarity=0.279 Sum_probs=78.7
Q ss_pred CCeEEEEECCCCCEEEEEcCCCe------EEEEECCC--c--eEE-----EEEecCCc--------cEEEEEEcCCCCEE
Q psy4393 70 LGISDVAWSSDSRLLVSGSDDKT------LKIWELSS--G--KCL-----KTLKGHSN--------YVFCCNFNPQSNLI 126 (247)
Q Consensus 70 ~~v~~~~~~~~~~~l~~~~~d~~------i~v~d~~~--~--~~~-----~~~~~~~~--------~v~~~~~~~~~~~l 126 (247)
++...+.+.+++..+++.++++. +..+++.. + ..+ ..++...+ ....+++.+++.++
T Consensus 20 GGlSgl~~~~~~~~~~avSD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~G~~~~~~~~D~Egi~~~~~g~~~ 99 (326)
T PF13449_consen 20 GGLSGLDYDPDDGRFYAVSDRGPNKGPPRFYTFRIDYDQGGIGGVTILDMIPLRDPDGQPFPKNGLDPEGIAVPPDGSFW 99 (326)
T ss_pred CcEeeEEEeCCCCEEEEEECCCCCCCCCcEEEEEeeccCCCccceEeccceeccCCCCCcCCcCCCChhHeEEecCCCEE
Confidence 34677778765556666666666 44444432 0 000 01111111 23356777778877
Q ss_pred EEeeCC------CCEEEEECCCCeEEEeec---------------CCCCCeEEEEECCCCCEEEEecCC-----C-----
Q psy4393 127 VSGSFD------ESVRIWDVRTGKCLKTLP---------------AHSDPVSAVHFNRDGSLIVSSSYD-----G----- 175 (247)
Q Consensus 127 ~~~~~d------~~i~v~d~~~~~~~~~~~---------------~~~~~i~~~~~~~~~~~l~~~~~d-----g----- 175 (247)
++.-.+ ..|..++.. |+.+..+. .......+|+++|+|+.|+++.+. +
T Consensus 100 is~E~~~~~~~~p~I~~~~~~-G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~~E~~l~~d~~~~~~ 178 (326)
T PF13449_consen 100 ISSEGGRTGGIPPRIRRFDLD-GRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAAMESPLKQDGPRANP 178 (326)
T ss_pred EEeCCccCCCCCCEEEEECCC-CcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEEECccccCCCccccc
Confidence 776555 667788865 55433331 122357889999999966655432 2
Q ss_pred ------eEEEEeCCC-ceeeeee--ccC------CCCCeEEEEECCCCCEEEE
Q psy4393 176 ------LCRIWDTAS-GQCLKTL--IDD------DNPPVSFVKFSPNGKYILA 213 (247)
Q Consensus 176 ------~i~v~d~~~-~~~~~~~--~~~------~~~~v~~~~~s~~~~~l~~ 213 (247)
.+..||..+ ++....+ ... ....+..+.+-+++++|+.
T Consensus 179 ~~~~~~ri~~~d~~~~~~~~~~~~y~ld~~~~~~~~~~isd~~al~d~~lLvL 231 (326)
T PF13449_consen 179 DNGSPLRILRYDPKTPGEPVAEYAYPLDPPPTAPGDNGISDIAALPDGRLLVL 231 (326)
T ss_pred ccCceEEEEEecCCCCCccceEEEEeCCccccccCCCCceeEEEECCCcEEEE
Confidence 233455554 2222222 111 3456778888899987765
No 456
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=90.68 E-value=3.5 Score=35.76 Aligned_cols=36 Identities=44% Similarity=0.778 Sum_probs=28.0
Q ss_pred eEEEEECC----CCCEEEEEcCCCeEEEEECCCceEEEEE
Q psy4393 72 ISDVAWSS----DSRLLVSGSDDKTLKIWELSSGKCLKTL 107 (247)
Q Consensus 72 v~~~~~~~----~~~~l~~~~~d~~i~v~d~~~~~~~~~~ 107 (247)
...+++++ +..++++.+.|+.+++||+.+++++...
T Consensus 217 ~~~~~~~~~~~~~~~~l~tl~~D~~LRiW~l~t~~~~~~~ 256 (547)
T PF11715_consen 217 AASLAVSSSEINDDTFLFTLSRDHTLRIWSLETGQCLATI 256 (547)
T ss_dssp EEEEEE-----ETTTEEEEEETTSEEEEEETTTTCEEEEE
T ss_pred cceEEEecceeCCCCEEEEEeCCCeEEEEECCCCeEEEEe
Confidence 45566666 6788999999999999999999886554
No 457
>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]
Probab=90.44 E-value=1.4 Score=36.56 Aligned_cols=161 Identities=17% Similarity=0.178 Sum_probs=89.5
Q ss_pred cCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceEE-EEEe-cCCc----cEE-EEEEcCCCCEEEEeeCCCCEEEE-EC
Q psy4393 69 KLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCL-KTLK-GHSN----YVF-CCNFNPQSNLIVSGSFDESVRIW-DV 140 (247)
Q Consensus 69 ~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~-~~~~-~~~~----~v~-~~~~~~~~~~l~~~~~d~~i~v~-d~ 140 (247)
...+..+-..|||+.+..-+. ..+.++++.+.... +++- ...+ .|. .+..-..+..+..+..||.+.-| |.
T Consensus 220 ~~~v~qllL~Pdg~~LYv~~g-~~~~v~~L~~r~l~~rkl~~dspg~~~~~Vte~l~lL~Gg~SLLv~~~dG~vsQWFdv 298 (733)
T COG4590 220 FSDVSQLLLTPDGKTLYVRTG-SELVVALLDKRSLQIRKLVDDSPGDSRHQVTEQLYLLSGGFSLLVVHEDGLVSQWFDV 298 (733)
T ss_pred ccchHhhEECCCCCEEEEecC-CeEEEEeecccccchhhhhhcCCCchHHHHHHHHHHHhCceeEEEEcCCCceeeeeee
Confidence 345667778999998876655 56778887653311 1111 1011 011 11112345567778888888765 65
Q ss_pred CCCe-----EEEeecCCCCCeEEEEECCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEE
Q psy4393 141 RTGK-----CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT 215 (247)
Q Consensus 141 ~~~~-----~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 215 (247)
+.+. .++.++-...++..+.-..+.+-+++-..+|.+.++.....+.+- ...--.....+++||.+.+|+.-.
T Consensus 299 r~~~~p~l~h~R~f~l~pa~~~~l~pe~~rkgF~~l~~~G~L~~f~st~~~~lL--~~~~~~~~~~~~~Sp~~~~Ll~e~ 376 (733)
T COG4590 299 RRDGQPHLNHIRNFKLAPAEVQFLLPETNRKGFYSLYRNGTLQSFYSTSEKLLL--FERAYQAPQLVAMSPNQAYLLSED 376 (733)
T ss_pred ecCCCCcceeeeccccCcccceeeccccccceEEEEcCCCceeeeecccCccee--hhhhhcCcceeeeCcccchheeec
Confidence 5332 122223222334433333344566777778888777554433221 111112345688999999887654
Q ss_pred cCCeEEEEECCCcceEEE
Q psy4393 216 LDNTLKLWDSKVVTPAII 233 (247)
Q Consensus 216 ~dg~i~vwd~~~~~~~~~ 233 (247)
.|.++++...+..|-++
T Consensus 377 -~gki~~~~l~Nr~Peis 393 (733)
T COG4590 377 -QGKIRLAQLENRNPEIS 393 (733)
T ss_pred -CCceEEEEecCCCCCcc
Confidence 57899998887776554
No 458
>PLN02153 epithiospecifier protein
Probab=90.20 E-value=8.6 Score=31.04 Aligned_cols=147 Identities=14% Similarity=0.217 Sum_probs=68.1
Q ss_pred CCCEEEEEcCC-----CeEEEEECCCceEEE--EEec---CCccEEEEEEcCCCCEEEEeeCC-----------CCEEEE
Q psy4393 80 DSRLLVSGSDD-----KTLKIWELSSGKCLK--TLKG---HSNYVFCCNFNPQSNLIVSGSFD-----------ESVRIW 138 (247)
Q Consensus 80 ~~~~l~~~~~d-----~~i~v~d~~~~~~~~--~~~~---~~~~v~~~~~~~~~~~l~~~~~d-----------~~i~v~ 138 (247)
++++++.|+.+ ..+.+||.++.+-.. .+.. ............++.+.+.|+.+ ..+.+|
T Consensus 85 ~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~p~~R~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~v~~y 164 (341)
T PLN02153 85 GTKLYIFGGRDEKREFSDFYSYDTVKNEWTFLTKLDEEGGPEARTFHSMASDENHVYVFGGVSKGGLMKTPERFRTIEAY 164 (341)
T ss_pred CCEEEEECCCCCCCccCcEEEEECCCCEEEEeccCCCCCCCCCceeeEEEEECCEEEEECCccCCCccCCCcccceEEEE
Confidence 35566666643 257788987754322 1100 11111112222345666777653 146778
Q ss_pred ECCCCeEEEeecCCC-----CCeEEEEECCCCCEEEEecCC-------------CeEEEEeCCCceeeeeeccC--CCCC
Q psy4393 139 DVRTGKCLKTLPAHS-----DPVSAVHFNRDGSLIVSSSYD-------------GLCRIWDTASGQCLKTLIDD--DNPP 198 (247)
Q Consensus 139 d~~~~~~~~~~~~~~-----~~i~~~~~~~~~~~l~~~~~d-------------g~i~v~d~~~~~~~~~~~~~--~~~~ 198 (247)
|..+.+=. .+.... ..-.+++. -++++++.++.+ ..+.+||+.+.+....-... ....
T Consensus 165 d~~~~~W~-~l~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~gG~~~~~~~~v~~yd~~~~~W~~~~~~g~~P~~r 242 (341)
T PLN02153 165 NIADGKWV-QLPDPGENFEKRGGAGFAV-VQGKIWVVYGFATSILPGGKSDYESNAVQFFDPASGKWTEVETTGAKPSAR 242 (341)
T ss_pred ECCCCeEe-eCCCCCCCCCCCCcceEEE-ECCeEEEEeccccccccCCccceecCceEEEEcCCCcEEeccccCCCCCCc
Confidence 88765421 111110 00111222 245555555432 35788998876544321111 0111
Q ss_pred eEEEEECCCCCEEEEEEcC--------------CeEEEEECCCc
Q psy4393 199 VSFVKFSPNGKYILAATLD--------------NTLKLWDSKVV 228 (247)
Q Consensus 199 v~~~~~s~~~~~l~~~~~d--------------g~i~vwd~~~~ 228 (247)
....+...++++++.|+.. +.+..||..+.
T Consensus 243 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~n~v~~~d~~~~ 286 (341)
T PLN02153 243 SVFAHAVVGKYIIIFGGEVWPDLKGHLGPGTLSNEGYALDTETL 286 (341)
T ss_pred ceeeeEEECCEEEEECcccCCccccccccccccccEEEEEcCcc
Confidence 1111122346777777741 25778887554
No 459
>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].
Probab=90.02 E-value=7.2 Score=29.87 Aligned_cols=134 Identities=16% Similarity=0.278 Sum_probs=70.7
Q ss_pred EEEEECCCceEEEEEecCCcc-EEEEEEcCCCCEEEEeeCC---CCEEEEECCC--CeE-EEe----ecCCCCCeEEEEE
Q psy4393 93 LKIWELSSGKCLKTLKGHSNY-VFCCNFNPQSNLIVSGSFD---ESVRIWDVRT--GKC-LKT----LPAHSDPVSAVHF 161 (247)
Q Consensus 93 i~v~d~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~~d---~~i~v~d~~~--~~~-~~~----~~~~~~~i~~~~~ 161 (247)
-.+||+.+.+.. .+....+. ...-.+.++|+++.+|+.. ..+++++... +.+ ... +.. ...-..+..
T Consensus 48 s~~yD~~tn~~r-pl~v~td~FCSgg~~L~dG~ll~tGG~~~G~~~ir~~~p~~~~~~~~w~e~~~~m~~-~RWYpT~~~ 125 (243)
T PF07250_consen 48 SVEYDPNTNTFR-PLTVQTDTFCSGGAFLPDGRLLQTGGDNDGNKAIRIFTPCTSDGTCDWTESPNDMQS-GRWYPTATT 125 (243)
T ss_pred EEEEecCCCcEE-eccCCCCCcccCcCCCCCCCEEEeCCCCccccceEEEecCCCCCCCCceECcccccC-CCccccceE
Confidence 347898887543 33322221 1122467899999998752 3478887644 011 111 111 111223455
Q ss_pred CCCCCEEEEecCCC-eEEEEeCCCc--eeeee-ecc-----CCCCCeEEEEECCCCCEEEEEEcCCeEEEEECCCcce
Q psy4393 162 NRDGSLIVSSSYDG-LCRIWDTASG--QCLKT-LID-----DDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTP 230 (247)
Q Consensus 162 ~~~~~~l~~~~~dg-~i~v~d~~~~--~~~~~-~~~-----~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~ 230 (247)
-|||+.|+.|+... ...+|..... ..... +.. ....-.-.+...|||++++.+..+ -.|||.+..+.
T Consensus 126 L~DG~vlIvGG~~~~t~E~~P~~~~~~~~~~~~~l~~~~~~~~~nlYP~~~llPdG~lFi~an~~--s~i~d~~~n~v 201 (243)
T PF07250_consen 126 LPDGRVLIVGGSNNPTYEFWPPKGPGPGPVTLPFLSQTSDTLPNNLYPFVHLLPDGNLFIFANRG--SIIYDYKTNTV 201 (243)
T ss_pred CCCCCEEEEeCcCCCcccccCCccCCCCceeeecchhhhccCccccCceEEEcCCCCEEEEEcCC--cEEEeCCCCeE
Confidence 68999999988775 3445543211 11111 111 011112346678999999988764 45567766544
No 460
>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein. Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat.
Probab=89.89 E-value=8.8 Score=30.69 Aligned_cols=64 Identities=17% Similarity=0.205 Sum_probs=33.7
Q ss_pred CCCEEEEEcC-----CCeEEEEECCCceEEEEEec-C-CccEEEEEEcCCCCEEEEeeCCCC----EEEEECCCCe
Q psy4393 80 DSRLLVSGSD-----DKTLKIWELSSGKCLKTLKG-H-SNYVFCCNFNPQSNLIVSGSFDES----VRIWDVRTGK 144 (247)
Q Consensus 80 ~~~~l~~~~~-----d~~i~v~d~~~~~~~~~~~~-~-~~~v~~~~~~~~~~~l~~~~~d~~----i~v~d~~~~~ 144 (247)
+++..+.|+. ...+..||+.+.+-.. +.. . ...........++.+.+.|+.++. +..||..+.+
T Consensus 123 ~~~iYv~GG~~~~~~~~~v~~yd~~~~~W~~-~~~~p~~~r~~~~~~~~~~~iYv~GG~~~~~~~~~~~yd~~~~~ 197 (323)
T TIGR03548 123 DGTLYVGGGNRNGKPSNKSYLFNLETQEWFE-LPDFPGEPRVQPVCVKLQNELYVFGGGSNIAYTDGYKYSPKKNQ 197 (323)
T ss_pred CCEEEEEeCcCCCccCceEEEEcCCCCCeeE-CCCCCCCCCCcceEEEECCEEEEEcCCCCccccceEEEecCCCe
Confidence 4555566654 2357788887655322 211 1 111112222345677777776542 4678887654
No 461
>PLN02193 nitrile-specifier protein
Probab=89.62 E-value=12 Score=31.85 Aligned_cols=146 Identities=10% Similarity=0.095 Sum_probs=70.8
Q ss_pred CCCEEEEEcCC-----CeEEEEECCCceEEEEEec---CCccEEEEEEcCCCCEEEEeeCCC-----CEEEEECCCCeEE
Q psy4393 80 DSRLLVSGSDD-----KTLKIWELSSGKCLKTLKG---HSNYVFCCNFNPQSNLIVSGSFDE-----SVRIWDVRTGKCL 146 (247)
Q Consensus 80 ~~~~l~~~~~d-----~~i~v~d~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d~-----~i~v~d~~~~~~~ 146 (247)
++.+++.|+.+ ..+..||+.+.+....-.. ...........-++.+.+.|+.++ .+..||+.+.+-.
T Consensus 228 ~~~lYvfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~h~~~~~~~~iYv~GG~~~~~~~~~~~~yd~~t~~W~ 307 (470)
T PLN02193 228 GSTLYVFGGRDASRQYNGFYSFDTTTNEWKLLTPVEEGPTPRSFHSMAADEENVYVFGGVSATARLKTLDSYNIVDKKWF 307 (470)
T ss_pred CCEEEEECCCCCCCCCccEEEEECCCCEEEEcCcCCCCCCCccceEEEEECCEEEEECCCCCCCCcceEEEEECCCCEEE
Confidence 34555666544 3577889877653321111 111111111223456677776543 3677887765421
Q ss_pred EeecC------CCCCeEEEEECCCCCEEEEecCC----CeEEEEeCCCceeeeeeccC--CCCCeEEEEECCCCCEEEEE
Q psy4393 147 KTLPA------HSDPVSAVHFNRDGSLIVSSSYD----GLCRIWDTASGQCLKTLIDD--DNPPVSFVKFSPNGKYILAA 214 (247)
Q Consensus 147 ~~~~~------~~~~i~~~~~~~~~~~l~~~~~d----g~i~v~d~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~ 214 (247)
.+.. .......+. -++++++.++.+ ..+.+||+.+.+....-... ........+..-++++++.|
T Consensus 308 -~~~~~~~~~~~R~~~~~~~--~~gkiyviGG~~g~~~~dv~~yD~~t~~W~~~~~~g~~P~~R~~~~~~~~~~~iyv~G 384 (470)
T PLN02193 308 -HCSTPGDSFSIRGGAGLEV--VQGKVWVVYGFNGCEVDDVHYYDPVQDKWTQVETFGVRPSERSVFASAAVGKHIVIFG 384 (470)
T ss_pred -eCCCCCCCCCCCCCcEEEE--ECCcEEEEECCCCCccCceEEEECCCCEEEEeccCCCCCCCcceeEEEEECCEEEEEC
Confidence 1111 011111122 256677777655 45889999887654321110 11111111222356677777
Q ss_pred EcC--------------CeEEEEECCCc
Q psy4393 215 TLD--------------NTLKLWDSKVV 228 (247)
Q Consensus 215 ~~d--------------g~i~vwd~~~~ 228 (247)
+.. +.+.+||..+.
T Consensus 385 G~~~~~~~~~~~~~~~~ndv~~~D~~t~ 412 (470)
T PLN02193 385 GEIAMDPLAHVGPGQLTDGTFALDTETL 412 (470)
T ss_pred CccCCccccccCccceeccEEEEEcCcC
Confidence 743 24778887654
No 462
>COG5276 Uncharacterized conserved protein [Function unknown]
Probab=89.33 E-value=9.2 Score=30.12 Aligned_cols=151 Identities=12% Similarity=0.024 Sum_probs=84.1
Q ss_pred CCeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEEEEecccC-CeEEEEECCCCCEEEEEcCCCeEEEEECCCce---E
Q psy4393 28 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKL-GISDVAWSSDSRLLVSGSDDKTLKIWELSSGK---C 103 (247)
Q Consensus 28 ~~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~---~ 103 (247)
.-+..+.++ ++++..+..+.-++|.|+.+......+..-.. .. .-.|.-.|++...+..+.-+.+.|+.+.+ .
T Consensus 87 ~l~~Dv~vs--e~yvyvad~ssGL~IvDIS~P~sP~~~~~lnt~gy-aygv~vsGn~aYVadlddgfLivdvsdpssP~l 163 (370)
T COG5276 87 DLFADVRVS--EEYVYVADWSSGLRIVDISTPDSPTLIGFLNTDGY-AYGVYVSGNYAYVADLDDGFLIVDVSDPSSPQL 163 (370)
T ss_pred hhhheeEec--ccEEEEEcCCCceEEEeccCCCCcceeccccCCce-EEEEEecCCEEEEeeccCcEEEEECCCCCCcee
Confidence 344556665 34555666777799999887654433322111 11 12345568888777755555578887643 2
Q ss_pred EEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEee-c-CCCCCeEEEEECCCCCEEEEecCCCeEEEEe
Q psy4393 104 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTL-P-AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181 (247)
Q Consensus 104 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~-~-~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d 181 (247)
.............+..+ |+..+.+..|+-+.+.|+.......-+ . .-...+.++..+++..+++... .-+.+.|
T Consensus 164 agrya~~~~d~~~v~IS--Gn~AYvA~~d~GL~ivDVSnp~sPvli~~~n~g~g~~sv~vsdnr~y~vvy~--egvlivd 239 (370)
T COG5276 164 AGRYALPGGDTHDVAIS--GNYAYVAWRDGGLTIVDVSNPHSPVLIGSYNTGPGTYSVSVSDNRAYLVVYD--EGVLIVD 239 (370)
T ss_pred eeeeccCCCCceeEEEe--cCeEEEEEeCCCeEEEEccCCCCCeEEEEEecCCceEEEEecCCeeEEEEcc--cceEEEe
Confidence 22222223333445555 567777788999999999765432111 1 1122577777777665555432 2344555
Q ss_pred CCCc
Q psy4393 182 TASG 185 (247)
Q Consensus 182 ~~~~ 185 (247)
..+.
T Consensus 240 ~s~~ 243 (370)
T COG5276 240 VSGP 243 (370)
T ss_pred cCCC
Confidence 5443
No 463
>PF08801 Nucleoporin_N: Nup133 N terminal like; InterPro: IPR014908 Nucleoporins are the main components of the nuclear pore complex (NPC) in eukaryotic cells, and mediate bidirectional nucleocytoplasmic transport, especially of mRNA and proteins. RNA undergoing nuclear export first encounters the basket of the nuclear pore and many nucleoporins are accessible on the basket side of the pore [, ]. This entry represents the N-terminal of Nucleoprotein which forms a seven-bladed beta propeller structure []. ; PDB: 1XKS_A.
Probab=89.20 E-value=12 Score=31.27 Aligned_cols=31 Identities=19% Similarity=0.416 Sum_probs=25.3
Q ss_pred CeEEEEECCCCCEEEEEEcCCeEEEEECCCc
Q psy4393 198 PVSFVKFSPNGKYILAATLDNTLKLWDSKVV 228 (247)
Q Consensus 198 ~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~ 228 (247)
.|..++..+..+.|++.+.+|.|.+||....
T Consensus 191 ~I~~v~~d~~r~~ly~l~~~~~Iq~w~l~~~ 221 (422)
T PF08801_consen 191 KIVQVAVDPSRRLLYTLTSDGSIQVWDLGPG 221 (422)
T ss_dssp -EEEEEEETTTTEEEEEESSE-EEEEEE-SS
T ss_pred ceeeEEecCCcCEEEEEeCCCcEEEEEEeCC
Confidence 4788889998899999999999999999753
No 464
>PLN00033 photosystem II stability/assembly factor; Provisional
Probab=89.10 E-value=12 Score=31.10 Aligned_cols=144 Identities=16% Similarity=0.133 Sum_probs=77.1
Q ss_pred EEEEECCCCCEEEEEcCCCeEEEEECCCceE--EEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCe-----E
Q psy4393 73 SDVAWSSDSRLLVSGSDDKTLKIWELSSGKC--LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK-----C 145 (247)
Q Consensus 73 ~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~-----~ 145 (247)
..+..++++..++.+.....++-||- +.. ...-......+..+.+.+++.+++++ ..|.+.. ....++ .
T Consensus 242 ~~v~~~~dG~~~~vg~~G~~~~s~d~--G~~~W~~~~~~~~~~l~~v~~~~dg~l~l~g-~~G~l~~-S~d~G~~~~~~~ 317 (398)
T PLN00033 242 STVNRSPDGDYVAVSSRGNFYLTWEP--GQPYWQPHNRASARRIQNMGWRADGGLWLLT-RGGGLYV-SKGTGLTEEDFD 317 (398)
T ss_pred eeEEEcCCCCEEEEECCccEEEecCC--CCcceEEecCCCccceeeeeEcCCCCEEEEe-CCceEEE-ecCCCCcccccc
Confidence 34556677776666644433333332 221 11122234457788888998887766 4455433 222332 1
Q ss_pred EEeecC--CCCCeEEEEECCCCCEEEEecCCCeEEEEeCCCceeeeeec--cCCCCCeEEEEECCCCCEEEEEEcCCeEE
Q psy4393 146 LKTLPA--HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLI--DDDNPPVSFVKFSPNGKYILAATLDNTLK 221 (247)
Q Consensus 146 ~~~~~~--~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~--~~~~~~v~~~~~s~~~~~l~~~~~dg~i~ 221 (247)
...... ....+..+.+.+++..+++| ..|.+... ...++.-.... ..-...+..+.|.++++.+++| .+|.|.
T Consensus 318 f~~~~~~~~~~~l~~v~~~~d~~~~a~G-~~G~v~~s-~D~G~tW~~~~~~~~~~~~ly~v~f~~~~~g~~~G-~~G~il 394 (398)
T PLN00033 318 FEEADIKSRGFGILDVGYRSKKEAWAAG-GSGILLRS-TDGGKSWKRDKGADNIAANLYSVKFFDDKKGFVLG-NDGVLL 394 (398)
T ss_pred eeecccCCCCcceEEEEEcCCCcEEEEE-CCCcEEEe-CCCCcceeEccccCCCCcceeEEEEcCCCceEEEe-CCcEEE
Confidence 222222 12347888898887766655 56765554 33344322222 1223456788887776655554 577776
Q ss_pred EE
Q psy4393 222 LW 223 (247)
Q Consensus 222 vw 223 (247)
-|
T Consensus 395 ~~ 396 (398)
T PLN00033 395 RY 396 (398)
T ss_pred Ee
Confidence 55
No 465
>KOG1900|consensus
Probab=89.10 E-value=20 Score=34.09 Aligned_cols=139 Identities=15% Similarity=0.331 Sum_probs=77.7
Q ss_pred cCCCeEEEEECCCceEEEEEecCCccEEEEEE-cC-------CCCEEEEeeCCCCEEEEECC----CCe-E----EEeec
Q psy4393 88 SDDKTLKIWELSSGKCLKTLKGHSNYVFCCNF-NP-------QSNLIVSGSFDESVRIWDVR----TGK-C----LKTLP 150 (247)
Q Consensus 88 ~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~-~~-------~~~~l~~~~~d~~i~v~d~~----~~~-~----~~~~~ 150 (247)
+-|..+.+|+.+++.....+.+....|..+.. .| .=+++.....--.|.++-+. ++. . ...+.
T Consensus 96 TiDn~L~lWny~~~~e~~~~d~~shtIl~V~LvkPkpgvFv~~IqhlLvvaT~~ei~ilgV~~~~~~~~~~~f~~~~~i~ 175 (1311)
T KOG1900|consen 96 TIDNNLFLWNYESDNELAEYDGLSHTILKVGLVKPKPGVFVPEIQHLLVVATPVEIVILGVSFDEFTGELSIFNTSFKIS 175 (1311)
T ss_pred EeCCeEEEEEcCCCCccccccchhhhheeeeeecCCCCcchhhhheeEEecccceEEEEEEEeccccCcccccccceeee
Confidence 35788999999986555555444444433322 12 11222222222334444321 111 0 12233
Q ss_pred CCCCCeEEEEECCCCCEEEEecCCCeEE--EEeCCCc---e-e-------------eee---eccCCCCCeEEEEECCCC
Q psy4393 151 AHSDPVSAVHFNRDGSLIVSSSYDGLCR--IWDTASG---Q-C-------------LKT---LIDDDNPPVSFVKFSPNG 208 (247)
Q Consensus 151 ~~~~~i~~~~~~~~~~~l~~~~~dg~i~--v~d~~~~---~-~-------------~~~---~~~~~~~~v~~~~~s~~~ 208 (247)
.....|+++....+|+.+++|- ||.+. +|....+ + + +.. +...+..+|..+..+...
T Consensus 176 ~dg~~V~~I~~t~nGRIF~~G~-dg~lyEl~Yq~~~gWf~~rc~Kiclt~s~ls~lvPs~~~~~~~~~dpI~qi~ID~SR 254 (1311)
T KOG1900|consen 176 VDGVSVNCITYTENGRIFFAGR-DGNLYELVYQAEDGWFGSRCRKICLTKSVLSSLVPSLLSVPGSSKDPIRQITIDNSR 254 (1311)
T ss_pred cCCceEEEEEeccCCcEEEeec-CCCEEEEEEeccCchhhcccccccCchhHHHHhhhhhhcCCCCCCCcceeeEecccc
Confidence 4455688999888999877665 55332 2222221 0 1 011 111335589999999999
Q ss_pred CEEEEEEcCCeEEEEECCC
Q psy4393 209 KYILAATLDNTLKLWDSKV 227 (247)
Q Consensus 209 ~~l~~~~~dg~i~vwd~~~ 227 (247)
..+++=+..|.|.+||...
T Consensus 255 ~IlY~lsek~~v~~Y~i~~ 273 (1311)
T KOG1900|consen 255 NILYVLSEKGTVSAYDIGG 273 (1311)
T ss_pred ceeeeeccCceEEEEEccC
Confidence 9999999999999999865
No 466
>COG5276 Uncharacterized conserved protein [Function unknown]
Probab=88.77 E-value=10 Score=29.89 Aligned_cols=150 Identities=16% Similarity=0.152 Sum_probs=85.8
Q ss_pred CeEEEEECCCCCEEEEEcCCCeEEEEECCCceEEEEEe--cCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEE--
Q psy4393 71 GISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLK--GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCL-- 146 (247)
Q Consensus 71 ~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~-- 146 (247)
-+.++.++ +++...+..+.-+++.|+.+...-..+. ...+...+ |.-.|++...+..+.-+-+.|+.+.+..
T Consensus 88 l~~Dv~vs--e~yvyvad~ssGL~IvDIS~P~sP~~~~~lnt~gyayg--v~vsGn~aYVadlddgfLivdvsdpssP~l 163 (370)
T COG5276 88 LFADVRVS--EEYVYVADWSSGLRIVDISTPDSPTLIGFLNTDGYAYG--VYVSGNYAYVADLDDGFLIVDVSDPSSPQL 163 (370)
T ss_pred hhheeEec--ccEEEEEcCCCceEEEeccCCCCcceeccccCCceEEE--EEecCCEEEEeeccCcEEEEECCCCCCcee
Confidence 35556665 4567777788889999998754322221 11133333 4445788888886777788888765422
Q ss_pred -EeecCCCCCeEEEEECCCCCEEEEecCCCeEEEEeCCCceeeeeecc-CCCCCeEEEEECCCCCEEEEEEcCCeEEEEE
Q psy4393 147 -KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID-DDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224 (247)
Q Consensus 147 -~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd 224 (247)
-...........++++ |++-+.+..|+-+.+.|+.......-+.. .-.+.+..+..+++..+++..+ --+.+-|
T Consensus 164 agrya~~~~d~~~v~IS--Gn~AYvA~~d~GL~ivDVSnp~sPvli~~~n~g~g~~sv~vsdnr~y~vvy~--egvlivd 239 (370)
T COG5276 164 AGRYALPGGDTHDVAIS--GNYAYVAWRDGGLTIVDVSNPHSPVLIGSYNTGPGTYSVSVSDNRAYLVVYD--EGVLIVD 239 (370)
T ss_pred eeeeccCCCCceeEEEe--cCeEEEEEeCCCeEEEEccCCCCCeEEEEEecCCceEEEEecCCeeEEEEcc--cceEEEe
Confidence 1222222233455554 56667777899899999876543222111 1223566777777665555443 3344445
Q ss_pred CCCc
Q psy4393 225 SKVV 228 (247)
Q Consensus 225 ~~~~ 228 (247)
....
T Consensus 240 ~s~~ 243 (370)
T COG5276 240 VSGP 243 (370)
T ss_pred cCCC
Confidence 4443
No 467
>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein. Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat.
Probab=88.38 E-value=11 Score=30.03 Aligned_cols=106 Identities=14% Similarity=0.160 Sum_probs=50.9
Q ss_pred CCCEEEEEcCC-----CeEEEEECCCceEE---EEEecCCccE--EEEEEcCCCCEEEEeeCC-----CCEEEEECCCCe
Q psy4393 80 DSRLLVSGSDD-----KTLKIWELSSGKCL---KTLKGHSNYV--FCCNFNPQSNLIVSGSFD-----ESVRIWDVRTGK 144 (247)
Q Consensus 80 ~~~~l~~~~~d-----~~i~v~d~~~~~~~---~~~~~~~~~v--~~~~~~~~~~~l~~~~~d-----~~i~v~d~~~~~ 144 (247)
++..++.|+.+ ..+..||+.+.+.. ..+....... .+++. -++.+.+.|+.. ..+..||+.+.+
T Consensus 72 ~~~lyviGG~~~~~~~~~v~~~d~~~~~w~~~~~~~~~lp~~~~~~~~~~-~~~~iYv~GG~~~~~~~~~v~~yd~~~~~ 150 (323)
T TIGR03548 72 ENGIYYIGGSNSSERFSSVYRITLDESKEELICETIGNLPFTFENGSACY-KDGTLYVGGGNRNGKPSNKSYLFNLETQE 150 (323)
T ss_pred CCEEEEEcCCCCCCCceeEEEEEEcCCceeeeeeEcCCCCcCccCceEEE-ECCEEEEEeCcCCCccCceEEEEcCCCCC
Confidence 44556666654 25666777665431 1111111111 11122 245666666642 357788887654
Q ss_pred E--EEeecCCCCCeEEEEECCCCCEEEEecCCC----eEEEEeCCCcee
Q psy4393 145 C--LKTLPAHSDPVSAVHFNRDGSLIVSSSYDG----LCRIWDTASGQC 187 (247)
Q Consensus 145 ~--~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg----~i~v~d~~~~~~ 187 (247)
- +..+.... .....+...++++++.|+.++ .+..||..+.+.
T Consensus 151 W~~~~~~p~~~-r~~~~~~~~~~~iYv~GG~~~~~~~~~~~yd~~~~~W 198 (323)
T TIGR03548 151 WFELPDFPGEP-RVQPVCVKLQNELYVFGGGSNIAYTDGYKYSPKKNQW 198 (323)
T ss_pred eeECCCCCCCC-CCcceEEEECCEEEEEcCCCCccccceEEEecCCCee
Confidence 2 21121111 111122233567777777654 356888887654
No 468
>PF12768 Rax2: Cortical protein marker for cell polarity
Probab=88.17 E-value=11 Score=29.60 Aligned_cols=95 Identities=18% Similarity=0.333 Sum_probs=55.9
Q ss_pred CeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEc------CCCeEEEEECCCceEEEEEec-----CCccEEEE
Q psy4393 49 KLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGS------DDKTLKIWELSSGKCLKTLKG-----HSNYVFCC 117 (247)
Q Consensus 49 g~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~------~d~~i~v~d~~~~~~~~~~~~-----~~~~v~~~ 117 (247)
..|++||..+.+....-.+-.+.|+++.|..+.+.++.|. ....+..||.++... ..+.. -.+++..+
T Consensus 16 ~~lC~yd~~~~qW~~~g~~i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~~w-~~~~~~~s~~ipgpv~a~ 94 (281)
T PF12768_consen 16 PGLCLYDTDNSQWSSPGNGISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQTW-SSLGGGSSNSIPGPVTAL 94 (281)
T ss_pred CEEEEEECCCCEeecCCCCceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCCee-eecCCcccccCCCcEEEE
Confidence 4589999877665554444556799999986666666553 345788899877653 22332 12556555
Q ss_pred EEc-CCC-CEEEEee-CC--CCEEEEECCCCe
Q psy4393 118 NFN-PQS-NLIVSGS-FD--ESVRIWDVRTGK 144 (247)
Q Consensus 118 ~~~-~~~-~~l~~~~-~d--~~i~v~d~~~~~ 144 (247)
.+. .++ ++.+.|. .+ ..|..||-....
T Consensus 95 ~~~~~d~~~~~~aG~~~~g~~~l~~~dGs~W~ 126 (281)
T PF12768_consen 95 TFISNDGSNFWVAGRSANGSTFLMKYDGSSWS 126 (281)
T ss_pred EeeccCCceEEEeceecCCCceEEEEcCCceE
Confidence 542 233 3444443 22 246677654443
No 469
>KOG2377|consensus
Probab=87.80 E-value=15 Score=30.82 Aligned_cols=135 Identities=13% Similarity=0.128 Sum_probs=76.5
Q ss_pred EEEEECCCCCEEEEEeCCCeEEEEecCCCe--EEEEEe-cccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceEE---
Q psy4393 31 SSVKFSPNGEWLASSSADKLIKIWGAYDGK--FEKTIS-GHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCL--- 104 (247)
Q Consensus 31 ~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~--~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~--- 104 (247)
+.+-|+-.++.| .|...|.+.-|...... ....+. ...++|.++.|++|.+.+++--.+..|.+++....+..
T Consensus 26 ngvFfDDaNkql-favrSggatgvvvkgpndDVpiSfdm~d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~~ 104 (657)
T KOG2377|consen 26 NGVFFDDANKQL-FAVRSGGATGVVVKGPNDDVPISFDMDDKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLEY 104 (657)
T ss_pred cceeeccCcceE-EEEecCCeeEEEEeCCCCCCCceeeecCCCceeEEEeccCcceEEEEecCceEEEEecCCCchhhHH
Confidence 344454333433 34455666666553221 222221 23568999999999999999999999999987433221
Q ss_pred -EEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCC-CeEEEeecCCCCCeEEEEECCCCCEE
Q psy4393 105 -KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT-GKCLKTLPAHSDPVSAVHFNRDGSLI 168 (247)
Q Consensus 105 -~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l 168 (247)
..-+.....|....|... .-+|.....| +-+|-... .+.++..+.+...|.=-.|.++-+.+
T Consensus 105 ~~~ck~k~~~IlGF~W~~s-~e~A~i~~~G-~e~y~v~pekrslRlVks~~~nvnWy~yc~et~v~ 168 (657)
T KOG2377|consen 105 TQECKTKNANILGFCWTSS-TEIAFITDQG-IEFYQVLPEKRSLRLVKSHNLNVNWYMYCPETAVI 168 (657)
T ss_pred HHHhccCcceeEEEEEecC-eeEEEEecCC-eEEEEEchhhhhhhhhhhcccCccEEEEccccceE
Confidence 122334455888888876 4444444333 45554432 22233344455555555677766543
No 470
>PRK14131 N-acetylneuraminic acid mutarotase; Provisional
Probab=87.75 E-value=14 Score=30.33 Aligned_cols=12 Identities=8% Similarity=0.193 Sum_probs=8.4
Q ss_pred eEEEEECCCceE
Q psy4393 92 TLKIWELSSGKC 103 (247)
Q Consensus 92 ~i~v~d~~~~~~ 103 (247)
.+.+||..+..-
T Consensus 190 ~v~~YD~~t~~W 201 (376)
T PRK14131 190 EVLSYDPSTNQW 201 (376)
T ss_pred eEEEEECCCCee
Confidence 478888877553
No 471
>TIGR03547 muta_rot_YjhT mutatrotase, YjhT family. Members of this protein family contain multiple copies of the beta-propeller-forming Kelch repeat. All are full-length homologs to YjhT of Escherichia coli, which has been identified as a mutarotase for sialic acid. This protein improves bacterial ability to obtain host sialic acid, and thus serves as a virulence factor. Some bacteria carry what appears to be a cyclically permuted homolog of this protein.
Probab=87.46 E-value=14 Score=29.89 Aligned_cols=12 Identities=17% Similarity=0.326 Sum_probs=8.5
Q ss_pred CeEEEEECCCce
Q psy4393 91 KTLKIWELSSGK 102 (247)
Q Consensus 91 ~~i~v~d~~~~~ 102 (247)
..+..||..+.+
T Consensus 168 ~~v~~YDp~t~~ 179 (346)
T TIGR03547 168 KNVLSYDPSTNQ 179 (346)
T ss_pred ceEEEEECCCCc
Confidence 457788887654
No 472
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=87.35 E-value=14 Score=29.82 Aligned_cols=102 Identities=23% Similarity=0.303 Sum_probs=54.0
Q ss_pred CeEEEEECCCCCEEEEEeCCCeEEEEecCCCeEEE---EE----ecccCCeEEEEECCC----CCEEEEEcCC-------
Q psy4393 29 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK---TI----SGHKLGISDVAWSSD----SRLLVSGSDD------- 90 (247)
Q Consensus 29 ~v~~~~~s~~~~~l~~~~~dg~v~iw~~~~~~~~~---~~----~~~~~~v~~~~~~~~----~~~l~~~~~d------- 90 (247)
...+++|.|+|+.+++ ...|.|++++ .++.... .+ .........++++|+ +.+.++.+..
T Consensus 3 ~P~~~a~~pdG~l~v~-e~~G~i~~~~-~~g~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~~~ 80 (331)
T PF07995_consen 3 NPRSMAFLPDGRLLVA-ERSGRIWVVD-KDGSLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDGGDN 80 (331)
T ss_dssp SEEEEEEETTSCEEEE-ETTTEEEEEE-TTTEECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSSSE
T ss_pred CceEEEEeCCCcEEEE-eCCceEEEEe-CCCcCcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCCCCc
Confidence 3578999999987765 6699999998 3444312 22 123456789999994 3333333311
Q ss_pred -CeEEEEECCCc--e-----EE-EEEec---CCccEEEEEEcCCCCEEEEeeCC
Q psy4393 91 -KTLKIWELSSG--K-----CL-KTLKG---HSNYVFCCNFNPQSNLIVSGSFD 132 (247)
Q Consensus 91 -~~i~v~d~~~~--~-----~~-~~~~~---~~~~v~~~~~~~~~~~l~~~~~d 132 (247)
..|.-|....+ . .+ ..+.. ....-..+.|.|++.+.++.+..
T Consensus 81 ~~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG~LYvs~G~~ 134 (331)
T PF07995_consen 81 DNRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDGKLYVSVGDG 134 (331)
T ss_dssp EEEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTSEEEEEEB-T
T ss_pred ceeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCCcEEEEeCCC
Confidence 13333443322 1 11 11111 12234568999999777665543
No 473
>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family. PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.
Probab=86.85 E-value=18 Score=30.61 Aligned_cols=55 Identities=20% Similarity=0.251 Sum_probs=37.1
Q ss_pred CccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeE--EEeec-----CCCCCeEEEEECCCC
Q psy4393 111 SNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC--LKTLP-----AHSDPVSAVHFNRDG 165 (247)
Q Consensus 111 ~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~--~~~~~-----~~~~~i~~~~~~~~~ 165 (247)
-..-+.+.|.|++.++++-...|.|++++...+.. +..+. ...+....|+++|+-
T Consensus 29 L~~Pw~maflPDG~llVtER~~G~I~~v~~~~~~~~~~~~l~~v~~~~ge~GLlglal~PdF 90 (454)
T TIGR03606 29 LNKPWALLWGPDNQLWVTERATGKILRVNPETGEVKVVFTLPEIVNDAQHNGLLGLALHPDF 90 (454)
T ss_pred CCCceEEEEcCCCeEEEEEecCCEEEEEeCCCCceeeeecCCceeccCCCCceeeEEECCCc
Confidence 34467889999998888766579999998655432 11111 124567889999874
No 474
>PLN02153 epithiospecifier protein
Probab=86.83 E-value=15 Score=29.66 Aligned_cols=54 Identities=17% Similarity=0.073 Sum_probs=26.9
Q ss_pred CCEEEEECCCCeEEEeecC---C-CCCeEEEEECCCCCEEEEecCC--------------CeEEEEeCCCcee
Q psy4393 133 ESVRIWDVRTGKCLKTLPA---H-SDPVSAVHFNRDGSLIVSSSYD--------------GLCRIWDTASGQC 187 (247)
Q Consensus 133 ~~i~v~d~~~~~~~~~~~~---~-~~~i~~~~~~~~~~~l~~~~~d--------------g~i~v~d~~~~~~ 187 (247)
..+.+||+.+.+-...-.. . .....++. ..++.+++.|+.. ..+..||+.+.+.
T Consensus 217 ~~v~~yd~~~~~W~~~~~~g~~P~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~~~n~v~~~d~~~~~W 288 (341)
T PLN02153 217 NAVQFFDPASGKWTEVETTGAKPSARSVFAHA-VVGKYIIIFGGEVWPDLKGHLGPGTLSNEGYALDTETLVW 288 (341)
T ss_pred CceEEEEcCCCcEEeccccCCCCCCcceeeeE-EECCEEEEECcccCCccccccccccccccEEEEEcCccEE
Confidence 3588889876542211110 0 11111222 2246677777742 2577888876553
No 475
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=86.46 E-value=3.1 Score=21.46 Aligned_cols=31 Identities=19% Similarity=0.257 Sum_probs=22.7
Q ss_pred CCCCEEEEEe-CCCeEEEEecCCCeEEEEEec
Q psy4393 37 PNGEWLASSS-ADKLIKIWGAYDGKFEKTISG 67 (247)
Q Consensus 37 ~~~~~l~~~~-~dg~v~iw~~~~~~~~~~~~~ 67 (247)
|++++|+++. .++.|.++|..++.....+..
T Consensus 1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~v 32 (42)
T TIGR02276 1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPV 32 (42)
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCeEEEEEEC
Confidence 5777776655 578999999887777666654
No 476
>PF12768 Rax2: Cortical protein marker for cell polarity
Probab=86.40 E-value=14 Score=29.00 Aligned_cols=146 Identities=19% Similarity=0.308 Sum_probs=83.4
Q ss_pred CCeEEEEECCCceEEEEEecCCccEEEEEEcCCCCEEEEee------CCCCEEEEECCCCeEEEeecC-----CCCCeEE
Q psy4393 90 DKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS------FDESVRIWDVRTGKCLKTLPA-----HSDPVSA 158 (247)
Q Consensus 90 d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~------~d~~i~v~d~~~~~~~~~~~~-----~~~~i~~ 158 (247)
...|++||..+.+....-.+-.+.|..+.|..+.++++.|. ....+..||..+.. ...+.. -.+++..
T Consensus 15 C~~lC~yd~~~~qW~~~g~~i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~~-w~~~~~~~s~~ipgpv~a 93 (281)
T PF12768_consen 15 CPGLCLYDTDNSQWSSPGNGISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQT-WSSLGGGSSNSIPGPVTA 93 (281)
T ss_pred CCEEEEEECCCCEeecCCCCceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCCe-eeecCCcccccCCCcEEE
Confidence 45689999887765544444567799999987767777664 34568889987654 223332 2367777
Q ss_pred EEECC-CCC-EEEEec-CCC--eEEEEeCCCceeeeeeccCCCCCeEEEEE--------------CCCCCEEEEEEc---
Q psy4393 159 VHFNR-DGS-LIVSSS-YDG--LCRIWDTASGQCLKTLIDDDNPPVSFVKF--------------SPNGKYILAATL--- 216 (247)
Q Consensus 159 ~~~~~-~~~-~l~~~~-~dg--~i~v~d~~~~~~~~~~~~~~~~~v~~~~~--------------s~~~~~l~~~~~--- 216 (247)
+.+.. |+. +.++|. .+| .+..||-.....+..-.......|..+.+ +.+.-+|++|..
T Consensus 94 ~~~~~~d~~~~~~aG~~~~g~~~l~~~dGs~W~~i~~~~~~~~t~I~~l~~~~l~~~~~~~~~~~~~~~~Llv~G~l~~~ 173 (281)
T PF12768_consen 94 LTFISNDGSNFWVAGRSANGSTFLMKYDGSSWSSIGSDILGSGTTIRGLQVLPLNSSSHDNSSLFDSDQVLLVTGSLNLP 173 (281)
T ss_pred EEeeccCCceEEEeceecCCCceEEEEcCCceEeccccccCCCCEEEEEEEEeccccccccccccCCCcEEEEEeeEecC
Confidence 76632 333 444443 233 56677655443332201111223333322 223334555552
Q ss_pred C-C--eEEEEECCCcceEEEEcc
Q psy4393 217 D-N--TLKLWDSKVVTPAIICST 236 (247)
Q Consensus 217 d-g--~i~vwd~~~~~~~~~~~~ 236 (247)
| | ...+||.....|.+....
T Consensus 174 ~~G~~saalydG~~w~Py~~t~~ 196 (281)
T PF12768_consen 174 DFGNASAALYDGTSWTPYLLTSS 196 (281)
T ss_pred CCCcEEEEEECCCEEEEEEEEec
Confidence 2 4 678999999999887553
No 477
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=86.03 E-value=7.1 Score=29.12 Aligned_cols=75 Identities=13% Similarity=0.271 Sum_probs=0.0
Q ss_pred EEEECCCCeEEEeecCCCCCeEEEEECCCC-CEEEEecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEE
Q psy4393 136 RIWDVRTGKCLKTLPAHSDPVSAVHFNRDG-SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILA 213 (247)
Q Consensus 136 ~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 213 (247)
++++.-.......+.....|. ++...| ..|+.+...+.|.+|++..........-.--+.|..+.++..|+||++
T Consensus 1 ~v~~~H~F~sQ~v~~~~~EP~---~~c~~g~d~Lfva~~g~~Vev~~l~~~~~~~~~~F~Tv~~V~~l~y~~~GDYlvT 76 (215)
T PF14761_consen 1 RVYNCHPFGSQNVVPCEQEPT---AVCCGGPDALFVAASGCKVEVYDLEQEECPLLCTFSTVGRVLQLVYSEAGDYLVT 76 (215)
T ss_pred CeEEecccCCceeeccccCcc---eeeccCCceEEEEcCCCEEEEEEcccCCCceeEEEcchhheeEEEeccccceEEE
No 478
>PF05935 Arylsulfotrans: Arylsulfotransferase (ASST); InterPro: IPR010262 This family consists of several bacterial arylsulphotransferase proteins. Arylsulphotransferase (ASST) transfers a sulphate group from phenolic sulphate esters to a phenolic acceptor substrate [].; PDB: 3ETT_B 3ELQ_A 3ETS_A.
Probab=85.83 E-value=21 Score=30.47 Aligned_cols=138 Identities=18% Similarity=0.188 Sum_probs=64.8
Q ss_pred CeEEEEecCCCeEEEEEecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCCceEEEEEecCCcc---EEEEEEcCCCCE
Q psy4393 49 KLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNY---VFCCNFNPQSNL 125 (247)
Q Consensus 49 g~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~---v~~~~~~~~~~~ 125 (247)
+...++|. +|.....+.........+...++|.+++... ..+..+|+. |+.+......... =..+...|+|++
T Consensus 128 ~~~~~iD~-~G~Vrw~~~~~~~~~~~~~~l~nG~ll~~~~--~~~~e~D~~-G~v~~~~~l~~~~~~~HHD~~~l~nGn~ 203 (477)
T PF05935_consen 128 SYTYLIDN-NGDVRWYLPLDSGSDNSFKQLPNGNLLIGSG--NRLYEIDLL-GKVIWEYDLPGGYYDFHHDIDELPNGNL 203 (477)
T ss_dssp EEEEEEET-TS-EEEEE-GGGT--SSEEE-TTS-EEEEEB--TEEEEE-TT---EEEEEE--TTEE-B-S-EEE-TTS-E
T ss_pred ceEEEECC-CccEEEEEccCccccceeeEcCCCCEEEecC--CceEEEcCC-CCEEEeeecCCcccccccccEECCCCCE
Confidence 34445554 3444444433222222256778888776555 777788875 5544433322211 123566788998
Q ss_pred EEEeeC-------------CCCEEEEECCCCeEEEeec--CC----C---------------------CCeEEEEECC-C
Q psy4393 126 IVSGSF-------------DESVRIWDVRTGKCLKTLP--AH----S---------------------DPVSAVHFNR-D 164 (247)
Q Consensus 126 l~~~~~-------------d~~i~v~d~~~~~~~~~~~--~~----~---------------------~~i~~~~~~~-~ 164 (247)
|+.+.. ...|..+| .+|+.+..+. .| . --+.++.+.+ +
T Consensus 204 L~l~~~~~~~~~~~~~~~~~D~Ivevd-~tG~vv~~wd~~d~ld~~~~~~~~~~~~~~~~~~~~~~DW~H~Nsi~yd~~d 282 (477)
T PF05935_consen 204 LILASETKYVDEDKDVDTVEDVIVEVD-PTGEVVWEWDFFDHLDPYRDTVLKPYPYGDISGSGGGRDWLHINSIDYDPSD 282 (477)
T ss_dssp EEEEEETTEE-TS-EE---S-EEEEE--TTS-EEEEEEGGGTS-TT--TTGGT--SSSSS-SSTTSBS--EEEEEEETTT
T ss_pred EEEEeecccccCCCCccEecCEEEEEC-CCCCEEEEEehHHhCCcccccccccccccccccCCCCCCccccCccEEeCCC
Confidence 887772 12355556 6666554421 00 0 1267889988 5
Q ss_pred CCEEEEecCCCeEEEEeCCCceeeeee
Q psy4393 165 GSLIVSSSYDGLCRIWDTASGQCLKTL 191 (247)
Q Consensus 165 ~~~l~~~~~dg~i~v~d~~~~~~~~~~ 191 (247)
+.+++++-....|...|.++++..-.+
T Consensus 283 d~iivSsR~~s~V~~Id~~t~~i~Wil 309 (477)
T PF05935_consen 283 DSIIVSSRHQSAVIKIDYRTGKIKWIL 309 (477)
T ss_dssp TEEEEEETTT-EEEEEE-TTS-EEEEE
T ss_pred CeEEEEcCcceEEEEEECCCCcEEEEe
Confidence 555555544558888887777654333
No 479
>PF03022 MRJP: Major royal jelly protein; InterPro: IPR003534 The major royal jelly proteins (MRJPs) comprise 12.5% of the mass, and 82-90% of the protein content [], of honeybee (Apis mellifera) royal jelly. Royal jelly is a substance secreted by the cephalic glands of nurse bees [] and it is used to trigger development of a queen bee from a bee larva. The biological function of the MRJPs is unknown, but they are believed to play a major role in nutrition due to their high essential amino acid content []. Two royal jelly proteins, MRJP3 and MRJP5, contain a tandem repeat that results from a high genetic variablility. This polymorphism may be useful for genotyping individual bees [].; PDB: 3Q6P_B 3Q6K_A 3Q6T_A 2QE8_B.
Probab=85.53 E-value=16 Score=28.81 Aligned_cols=166 Identities=14% Similarity=0.261 Sum_probs=0.0
Q ss_pred CeEEEEECCCCCEEEEEcCC------------CeEEEEECCCceEEEEEe------cCCccEEEEEEcCCCC------EE
Q psy4393 71 GISDVAWSSDSRLLVSGSDD------------KTLKIWELSSGKCLKTLK------GHSNYVFCCNFNPQSN------LI 126 (247)
Q Consensus 71 ~v~~~~~~~~~~~l~~~~~d------------~~i~v~d~~~~~~~~~~~------~~~~~v~~~~~~~~~~------~l 126 (247)
.|..+...+.+.+-+.=+.. ..|.+||+.+.+.++.+. ...+.+..+.+..... ..
T Consensus 2 sV~~v~iD~~~rLWVlD~G~~~~~~~~~~~~~pKLv~~Dl~t~~li~~~~~p~~~~~~~s~lndl~VD~~~~~~~~~~aY 81 (287)
T PF03022_consen 2 SVQRVQIDECGRLWVLDSGRPNGLQPPKQVCPPKLVAFDLKTNQLIRRYPFPPDIAPPDSFLNDLVVDVRDGNCDDGFAY 81 (287)
T ss_dssp -EEEEEE-TTSEEEEEE-CCHSSSSTTGHTS--EEEEEETTTTCEEEEEE--CCCS-TCGGEEEEEEECTTTTS-SEEEE
T ss_pred cccEEEEcCCCCEEEEeCCCcCCCCCCCCCCCcEEEEEECCCCcEEEEEECChHHcccccccceEEEEccCCCCcceEEE
Q ss_pred EEeeCCCCEEEEECCCCeEEEeecCCCC-------------------CeEEEEECC---CCCEEEEecCCCeEEEEeCCC
Q psy4393 127 VSGSFDESVRIWDVRTGKCLKTLPAHSD-------------------PVSAVHFNR---DGSLIVSSSYDGLCRIWDTAS 184 (247)
Q Consensus 127 ~~~~~d~~i~v~d~~~~~~~~~~~~~~~-------------------~i~~~~~~~---~~~~l~~~~~dg~i~v~d~~~ 184 (247)
++-...+.|.++|+.+++..+.+..+.. .+..++.+| +++.|+-....+. ++|.+.+
T Consensus 82 ItD~~~~glIV~dl~~~~s~Rv~~~~~~~~p~~~~~~i~g~~~~~~dg~~gial~~~~~d~r~LYf~~lss~-~ly~v~T 160 (287)
T PF03022_consen 82 ITDSGGPGLIVYDLATGKSWRVLHNSFSPDPDAGPFTIGGESFQWPDGIFGIALSPISPDGRWLYFHPLSSR-KLYRVPT 160 (287)
T ss_dssp EEETTTCEEEEEETTTTEEEEEETCGCTTS-SSEEEEETTEEEEETTSEEEEEE-TTSTTS-EEEEEETT-S-EEEEEEH
T ss_pred EeCCCcCcEEEEEccCCcEEEEecCCcceeccccceeccCceEecCCCccccccCCCCCCccEEEEEeCCCC-cEEEEEH
Q ss_pred ceeeeeeccCCC-------------CCeEEEEECCCCCEEEEEEcCCeEEEEECCC----cceEEEEccC
Q psy4393 185 GQCLKTLIDDDN-------------PPVSFVKFSPNGKYILAATLDNTLKLWDSKV----VTPAIICSTP 237 (247)
Q Consensus 185 ~~~~~~~~~~~~-------------~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~----~~~~~~~~~~ 237 (247)
.-....-..... +....++++++|.++++--..+.|..|+.+. .+..++.+.+
T Consensus 161 ~~L~~~~~~~~~~~~~~v~~lG~k~~~s~g~~~D~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~l~~d~ 230 (287)
T PF03022_consen 161 SVLRDPSLSDAQALASQVQDLGDKGSQSDGMAIDPNGNLYFTDVEQNAIGCWDPDGPYTPENFEILAQDP 230 (287)
T ss_dssp HHHCSTT--HHH-HHHT-EEEEE---SECEEEEETTTEEEEEECCCTEEEEEETTTSB-GCCEEEEEE-C
T ss_pred HHhhCccccccccccccceeccccCCCCceEEECCCCcEEEecCCCCeEEEEeCCCCcCccchheeEEcC
No 480
>PF01731 Arylesterase: Arylesterase; InterPro: IPR002640 The serum paraoxonases/arylesterases are enzymes that catalyse the hydrolysis of the toxic metabolites of a variety of organophosphorus insecticides. The enzymes hydrolyse a broad spectrum of organophosphate substrates, including paraoxon and a number of aromatic carboxylic acid esters (e.g., phenyl acetate), and hence confer resistance to organophosphate toxicity []. Mammals have 3 distinct paraoxonase types, termed PON1-3 [, ]. In mice and humans, the PON genes are found on the same chromosome in close proximity. PON activity has been found in variety of tissues, with highest levels in liver and serum - the source of serum PON is thought to be the liver. Unlike mammals, fish and avian species lack paraoxonase activity. Human and rabbit PONs appear to have two distinct Ca2+ binding sites, one required for stability and one required for catalytic activity. The Ca2+ dependency of PONs suggests a mechanism of hydrolysis where Ca2+ acts as the electrophillic catalyst, like that proposed for phospholipase A2. The paraoxonase enzymes, PON1 and PON3, are high density lipoprotein (HDL)- associated proteins capable of preventing oxidative modification of low density lipoproteins (LPL) []. Although PON2 has oxidative properties, the enzyme does not associate with HDL. Within a given species, PON1, PON2 and PON3 share ~60% amino acid sequence identity, whereas between mammalian species particular PONs (1,2 or 3) share 79-90% identity at the amino acid level. Human PON1 and PON3 share numerous conserved phosphorylation and N-glycosylation sites; however, it is not known whether the PON proteins are modified at these sites, or whether modification at these sites is required for activity in vivo []. This family consists of arylesterases (Also known as serum paraoxonase) 3.1.1.2 from EC. These enzymes hydrolyse organophosphorus esters such as paraoxon and are found in the liver and blood. They confer resistance to organophosphate toxicity []. Human arylesterase (PON1) P27169 from SWISSPROT is associated with HDL and may protect against LDL oxidation [].; GO: 0004064 arylesterase activity
Probab=84.72 E-value=7.4 Score=24.40 Aligned_cols=27 Identities=22% Similarity=0.552 Sum_probs=22.3
Q ss_pred EEEEECCCCCEEEEEE-cCCeEEEEECC
Q psy4393 200 SFVKFSPNGKYILAAT-LDNTLKLWDSK 226 (247)
Q Consensus 200 ~~~~~s~~~~~l~~~~-~dg~i~vwd~~ 226 (247)
+.+.++|++++|+.++ ..+.|++|+.+
T Consensus 57 NGI~~s~~~k~lyVa~~~~~~I~vy~~~ 84 (86)
T PF01731_consen 57 NGIAISPDKKYLYVASSLAHSIHVYKRH 84 (86)
T ss_pred ceEEEcCCCCEEEEEeccCCeEEEEEec
Confidence 5688999999998776 46899999864
No 481
>smart00564 PQQ beta-propeller repeat. Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.
Probab=83.95 E-value=3.4 Score=20.02 Aligned_cols=24 Identities=33% Similarity=0.417 Sum_probs=19.4
Q ss_pred EEEEeeCCCCEEEEECCCCeEEEe
Q psy4393 125 LIVSGSFDESVRIWDVRTGKCLKT 148 (247)
Q Consensus 125 ~l~~~~~d~~i~v~d~~~~~~~~~ 148 (247)
.++.++.++.++.+|..+|+.+..
T Consensus 8 ~v~~~~~~g~l~a~d~~~G~~~W~ 31 (33)
T smart00564 8 TVYVGSTDGTLYALDAKTGEILWT 31 (33)
T ss_pred EEEEEcCCCEEEEEEcccCcEEEE
Confidence 577778899999999988876554
No 482
>COG5290 IkappaB kinase complex, IKAP component [Transcription]
Probab=83.46 E-value=35 Score=31.01 Aligned_cols=92 Identities=16% Similarity=0.289 Sum_probs=49.5
Q ss_pred EEEEEcCCCCEEEEeeCCCC-----EEEEECCC---CeEEEeecCCCCCeEEEEECCCCCEEEEecCCCeEEEEeCCCce
Q psy4393 115 FCCNFNPQSNLIVSGSFDES-----VRIWDVRT---GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 186 (247)
Q Consensus 115 ~~~~~~~~~~~l~~~~~d~~-----i~v~d~~~---~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~ 186 (247)
..++|-|+|..+++-+.||. +.++.-+. |+.-... .....+..++|+-....++. ...+.+.+|-..+..
T Consensus 250 ~~LSWkpqgS~~ati~td~~~~S~~ViFfErNGLrHGef~lr~-~~dEk~~~~~wn~~s~vlav-~~~n~~~lwttkNyh 327 (1243)
T COG5290 250 HQLSWKPQGSKYATIGTDGCSTSESVIFFERNGLRHGEFDLRV-GCDEKAFLENWNLLSTVLAV-AEGNLLKLWTTKNYH 327 (1243)
T ss_pred hccccccCCceeeeeccCCCCCcceEEEEccCCcccCCccccC-CchhhhhhhhhhHHHHHHHH-hhcceEEEEEccceE
Confidence 34789999999999775552 55554321 1110000 11223445566655544443 346678999776543
Q ss_pred eeeeeccCCCCCeEEEEECCCCC
Q psy4393 187 CLKTLIDDDNPPVSFVKFSPNGK 209 (247)
Q Consensus 187 ~~~~~~~~~~~~v~~~~~s~~~~ 209 (247)
..-.. ....+.+..+.|+|...
T Consensus 328 WYLK~-e~~ip~~s~vkwhpe~~ 349 (1243)
T COG5290 328 WYLKV-ERQIPGISYVKWHPEEK 349 (1243)
T ss_pred EEEEE-eecCCCcceeeeccccC
Confidence 22111 11234567788998654
No 483
>PF13449 Phytase-like: Esterase-like activity of phytase
Probab=83.30 E-value=22 Score=28.59 Aligned_cols=143 Identities=15% Similarity=0.219 Sum_probs=80.1
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCe------EEEEecCC--C--eEE-----EEEecccC--------CeEEEEECCCCCE
Q psy4393 27 TKAVSSVKFSPNGEWLASSSADKL------IKIWGAYD--G--KFE-----KTISGHKL--------GISDVAWSSDSRL 83 (247)
Q Consensus 27 ~~~v~~~~~s~~~~~l~~~~~dg~------v~iw~~~~--~--~~~-----~~~~~~~~--------~v~~~~~~~~~~~ 83 (247)
-+.++.+.+.+++..+++.+.+|. +..+++.. + ... ..+....+ -..+|++.++|.+
T Consensus 19 ~GGlSgl~~~~~~~~~~avSD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~G~~~~~~~~D~Egi~~~~~g~~ 98 (326)
T PF13449_consen 19 FGGLSGLDYDPDDGRFYAVSDRGPNKGPPRFYTFRIDYDQGGIGGVTILDMIPLRDPDGQPFPKNGLDPEGIAVPPDGSF 98 (326)
T ss_pred cCcEeeEEEeCCCCEEEEEECCCCCCCCCcEEEEEeeccCCCccceEeccceeccCCCCCcCCcCCCChhHeEEecCCCE
Confidence 477889999965555555566665 44444322 1 000 01111111 2336788778888
Q ss_pred EEEEcCC------CeEEEEECCCceEEEEEe---------------cCCccEEEEEEcCCCCEEEEeeCC-----C--C-
Q psy4393 84 LVSGSDD------KTLKIWELSSGKCLKTLK---------------GHSNYVFCCNFNPQSNLIVSGSFD-----E--S- 134 (247)
Q Consensus 84 l~~~~~d------~~i~v~d~~~~~~~~~~~---------------~~~~~v~~~~~~~~~~~l~~~~~d-----~--~- 134 (247)
+++.-.+ ..|..++.. +.....+. ........++++|+|+.|+++.+. + .
T Consensus 99 ~is~E~~~~~~~~p~I~~~~~~-G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~~E~~l~~d~~~~~ 177 (326)
T PF13449_consen 99 WISSEGGRTGGIPPRIRRFDLD-GRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAAMESPLKQDGPRAN 177 (326)
T ss_pred EEEeCCccCCCCCCEEEEECCC-CcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEEECccccCCCcccc
Confidence 8877777 788888865 54433321 112346789999999966554332 2 1
Q ss_pred ------EEE--EECCC-CeE----EEeecC-----CCCCeEEEEECCCCCEEEE
Q psy4393 135 ------VRI--WDVRT-GKC----LKTLPA-----HSDPVSAVHFNRDGSLIVS 170 (247)
Q Consensus 135 ------i~v--~d~~~-~~~----~~~~~~-----~~~~i~~~~~~~~~~~l~~ 170 (247)
+++ ||..+ +.. ...+.. ....++.+.+.+++++|+.
T Consensus 178 ~~~~~~~ri~~~d~~~~~~~~~~~~y~ld~~~~~~~~~~isd~~al~d~~lLvL 231 (326)
T PF13449_consen 178 PDNGSPLRILRYDPKTPGEPVAEYAYPLDPPPTAPGDNGISDIAALPDGRLLVL 231 (326)
T ss_pred cccCceEEEEEecCCCCCccceEEEEeCCccccccCCCCceeEEEECCCcEEEE
Confidence 444 45443 211 222222 3456788888899886653
No 484
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=81.67 E-value=26 Score=28.27 Aligned_cols=100 Identities=21% Similarity=0.309 Sum_probs=52.7
Q ss_pred eEEEEECCCCCEEEEEcCCCeEEEEECCCceE---EEEE----ecCCccEEEEEEcCC---CCEEEEeeC-C--------
Q psy4393 72 ISDVAWSSDSRLLVSGSDDKTLKIWELSSGKC---LKTL----KGHSNYVFCCNFNPQ---SNLIVSGSF-D-------- 132 (247)
Q Consensus 72 v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~---~~~~----~~~~~~v~~~~~~~~---~~~l~~~~~-d-------- 132 (247)
.+.|+|.|+|+.+++ ...|.|++++ .++.. +..+ .........++++|+ ...++.... .
T Consensus 4 P~~~a~~pdG~l~v~-e~~G~i~~~~-~~g~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~~~~ 81 (331)
T PF07995_consen 4 PRSMAFLPDGRLLVA-ERSGRIWVVD-KDGSLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDGGDND 81 (331)
T ss_dssp EEEEEEETTSCEEEE-ETTTEEEEEE-TTTEECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSSSEE
T ss_pred ceEEEEeCCCcEEEE-eCCceEEEEe-CCCcCcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCCCCcc
Confidence 568999999887665 5699999999 44433 2222 122345688899984 233333222 1
Q ss_pred CCEEEEECCCC-------eEE-EeecC---CCCCeEEEEECCCCCEEEEecC
Q psy4393 133 ESVRIWDVRTG-------KCL-KTLPA---HSDPVSAVHFNRDGSLIVSSSY 173 (247)
Q Consensus 133 ~~i~v~d~~~~-------~~~-~~~~~---~~~~i~~~~~~~~~~~l~~~~~ 173 (247)
..|.-|....+ +.+ ..... ....-..|.|.|||.++++.+.
T Consensus 82 ~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG~LYvs~G~ 133 (331)
T PF07995_consen 82 NRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDGKLYVSVGD 133 (331)
T ss_dssp EEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTSEEEEEEB-
T ss_pred eeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCCcEEEEeCC
Confidence 12333333322 111 11222 2344577999999976666553
No 485
>PF01011 PQQ: PQQ enzyme repeat family.; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A ....
Probab=80.69 E-value=5.9 Score=20.21 Aligned_cols=28 Identities=25% Similarity=0.299 Sum_probs=22.3
Q ss_pred EEEEeeCCCCEEEEECCCCeEEEeecCC
Q psy4393 125 LIVSGSFDESVRIWDVRTGKCLKTLPAH 152 (247)
Q Consensus 125 ~l~~~~~d~~i~v~d~~~~~~~~~~~~~ 152 (247)
.++.++.+|.++-+|.++|+.+..++..
T Consensus 2 ~v~~~~~~g~l~AlD~~TG~~~W~~~~~ 29 (38)
T PF01011_consen 2 RVYVGTPDGYLYALDAKTGKVLWKFQTG 29 (38)
T ss_dssp EEEEETTTSEEEEEETTTTSEEEEEESS
T ss_pred EEEEeCCCCEEEEEECCCCCEEEeeeCC
Confidence 3556688999999999999988776543
No 486
>KOG3616|consensus
Probab=80.38 E-value=4.8 Score=35.83 Aligned_cols=69 Identities=19% Similarity=0.322 Sum_probs=47.2
Q ss_pred CCCeEEEEECCCCCEEEEecCCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEcCCeEEEEEC
Q psy4393 153 SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225 (247)
Q Consensus 153 ~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~ 225 (247)
...++++.-+|.+..++.+..||.+.+|+....+.-+.. ....|-..+.|...| |++.++|.++.-|.-
T Consensus 14 ~e~~~aiqshp~~~s~v~~~~d~si~lfn~~~r~qski~--~~~~p~~nlv~tnhg--l~~~tsdrr~la~~~ 82 (1636)
T KOG3616|consen 14 DEFTTAIQSHPGGQSFVLAHQDGSIILFNFIPRRQSKIC--EEAKPKENLVFTNHG--LVTATSDRRALAWKE 82 (1636)
T ss_pred cceeeeeeecCCCceEEEEecCCcEEEEeecccchhhhh--hhcCCccceeeeccc--eEEEeccchhheeec
Confidence 345677888899999999999999999987654322211 112223445666655 777777888888854
No 487
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=80.17 E-value=12 Score=23.59 Aligned_cols=47 Identities=19% Similarity=0.163 Sum_probs=27.8
Q ss_pred CCCeEEEEeCCCceeeeeeccCCCCCeEEEEECCCCCEEEEEEc-CCeEE
Q psy4393 173 YDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATL-DNTLK 221 (247)
Q Consensus 173 ~dg~i~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-dg~i~ 221 (247)
.+|.+.-||..+++....+ ..- .--+.+++++|+++|+.+-. -.+|.
T Consensus 35 ~~GRll~ydp~t~~~~vl~-~~L-~fpNGVals~d~~~vlv~Et~~~Ri~ 82 (89)
T PF03088_consen 35 PTGRLLRYDPSTKETTVLL-DGL-YFPNGVALSPDESFVLVAETGRYRIL 82 (89)
T ss_dssp --EEEEEEETTTTEEEEEE-EEE-SSEEEEEE-TTSSEEEEEEGGGTEEE
T ss_pred CCcCEEEEECCCCeEEEeh-hCC-CccCeEEEcCCCCEEEEEeccCceEE
Confidence 4577888999887643222 111 12367999999998877753 33443
No 488
>PF05935 Arylsulfotrans: Arylsulfotransferase (ASST); InterPro: IPR010262 This family consists of several bacterial arylsulphotransferase proteins. Arylsulphotransferase (ASST) transfers a sulphate group from phenolic sulphate esters to a phenolic acceptor substrate [].; PDB: 3ETT_B 3ELQ_A 3ETS_A.
Probab=79.79 E-value=38 Score=28.99 Aligned_cols=146 Identities=14% Similarity=0.116 Sum_probs=67.5
Q ss_pred CCeEEEEECCCceEEEEEecCCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeecCCCCC---eEEEEECCCCC
Q psy4393 90 DKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDP---VSAVHFNRDGS 166 (247)
Q Consensus 90 d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~---i~~~~~~~~~~ 166 (247)
.+...++|.+ |.....+.........+...++|.+++... ..+..+|+- |+.+.......+. =..+...|+|.
T Consensus 127 ~~~~~~iD~~-G~Vrw~~~~~~~~~~~~~~l~nG~ll~~~~--~~~~e~D~~-G~v~~~~~l~~~~~~~HHD~~~l~nGn 202 (477)
T PF05935_consen 127 SSYTYLIDNN-GDVRWYLPLDSGSDNSFKQLPNGNLLIGSG--NRLYEIDLL-GKVIWEYDLPGGYYDFHHDIDELPNGN 202 (477)
T ss_dssp EEEEEEEETT-S-EEEEE-GGGT--SSEEE-TTS-EEEEEB--TEEEEE-TT---EEEEEE--TTEE-B-S-EEE-TTS-
T ss_pred CceEEEECCC-ccEEEEEccCccccceeeEcCCCCEEEecC--CceEEEcCC-CCEEEeeecCCcccccccccEECCCCC
Confidence 4456666653 443333332211111145668888776554 778888875 5554444332211 12356778888
Q ss_pred EEEEecC-------------CCeEEEEeCCCceeeeeec---------c----------C----C---CCCeEEEEECC-
Q psy4393 167 LIVSSSY-------------DGLCRIWDTASGQCLKTLI---------D----------D----D---NPPVSFVKFSP- 206 (247)
Q Consensus 167 ~l~~~~~-------------dg~i~v~d~~~~~~~~~~~---------~----------~----~---~~~v~~~~~s~- 206 (247)
+|+.+.. ...|..+| .+|+.+..+- . . . =..++++.+.+
T Consensus 203 ~L~l~~~~~~~~~~~~~~~~~D~Ivevd-~tG~vv~~wd~~d~ld~~~~~~~~~~~~~~~~~~~~~~DW~H~Nsi~yd~~ 281 (477)
T PF05935_consen 203 LLILASETKYVDEDKDVDTVEDVIVEVD-PTGEVVWEWDFFDHLDPYRDTVLKPYPYGDISGSGGGRDWLHINSIDYDPS 281 (477)
T ss_dssp EEEEEEETTEE-TS-EE---S-EEEEE--TTS-EEEEEEGGGTS-TT--TTGGT--SSSSS-SSTTSBS--EEEEEEETT
T ss_pred EEEEEeecccccCCCCccEecCEEEEEC-CCCCEEEEEehHHhCCcccccccccccccccccCCCCCCccccCccEEeCC
Confidence 8876661 11344445 5554433220 0 0 0 02468899988
Q ss_pred CCCEEEEEEcCCeEEEEECCCcceEEEEccCCcc
Q psy4393 207 NGKYILAATLDNTLKLWDSKVVTPAIICSTPLNL 240 (247)
Q Consensus 207 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~ 240 (247)
++.+++++-....|...|.++++..=++..+..+
T Consensus 282 dd~iivSsR~~s~V~~Id~~t~~i~Wilg~~~~w 315 (477)
T PF05935_consen 282 DDSIIVSSRHQSAVIKIDYRTGKIKWILGPPGGW 315 (477)
T ss_dssp TTEEEEEETTT-EEEEEE-TTS-EEEEES-STT-
T ss_pred CCeEEEEcCcceEEEEEECCCCcEEEEeCCCCCC
Confidence 4445555545669999998888776666665543
No 489
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=79.73 E-value=6.3 Score=20.02 Aligned_cols=29 Identities=17% Similarity=0.119 Sum_probs=18.4
Q ss_pred CCccEEEEEEcCCCCEEEEeeC-C--CCEEEE
Q psy4393 110 HSNYVFCCNFNPQSNLIVSGSF-D--ESVRIW 138 (247)
Q Consensus 110 ~~~~v~~~~~~~~~~~l~~~~~-d--~~i~v~ 138 (247)
....-....|+|+|+.|+..+. + |...||
T Consensus 7 ~~~~~~~p~~SpDGk~i~f~s~~~~~g~~diy 38 (39)
T PF07676_consen 7 SPGDDGSPAWSPDGKYIYFTSNRNDRGSFDIY 38 (39)
T ss_dssp SSSSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred CCccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence 3445667889999998877654 3 444444
No 490
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=79.32 E-value=21 Score=32.79 Aligned_cols=86 Identities=12% Similarity=0.110 Sum_probs=48.6
Q ss_pred EEEEee-CCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEE-ecCCC-----eEEEEeCCCceee-eeeccCCC
Q psy4393 125 LIVSGS-FDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVS-SSYDG-----LCRIWDTASGQCL-KTLIDDDN 196 (247)
Q Consensus 125 ~l~~~~-~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~-~~~dg-----~i~v~d~~~~~~~-~~~~~~~~ 196 (247)
.||... ..+.|.+-|............+..++..-.|+|||+.|+- .+.++ .|.+-|+++.... ..+ .-+.
T Consensus 320 kiAfv~~~~~~L~~~D~dG~n~~~ve~~~~~~i~sP~~SPDG~~vAY~ts~e~~~g~s~vYv~~L~t~~~~~vkl-~ve~ 398 (912)
T TIGR02171 320 KLAFRNDVTGNLAYIDYTKGASRAVEIEDTISVYHPDISPDGKKVAFCTGIEGLPGKSSVYVRNLNASGSGLVKL-PVEN 398 (912)
T ss_pred eEEEEEcCCCeEEEEecCCCCceEEEecCCCceecCcCCCCCCEEEEEEeecCCCCCceEEEEehhccCCCceEe-eccc
Confidence 344444 2357888887655443331345678888899999999886 44443 4777787764321 222 2223
Q ss_pred CCeEEEEECCCCCEE
Q psy4393 197 PPVSFVKFSPNGKYI 211 (247)
Q Consensus 197 ~~v~~~~~s~~~~~l 211 (247)
..|..-...++|..+
T Consensus 399 aaiprwrv~e~gdt~ 413 (912)
T TIGR02171 399 AAIPRWRVLENGDTV 413 (912)
T ss_pred ccccceEecCCCCeE
Confidence 334333445555544
No 491
>PF10395 Utp8: Utp8 family; InterPro: IPR018843 Utp8 is an essential component of the nuclear tRNA export machinery in Saccharomyces cerevisiae (Baker's yeast). It is a tRNA binding protein that acts at a step between tRNA maturation /aminoacylation, and translocation of the tRNA across the nuclear pore complex [].
Probab=79.10 E-value=47 Score=29.62 Aligned_cols=153 Identities=20% Similarity=0.233 Sum_probs=78.5
Q ss_pred cCCeEEEEECCCCCEEEEEcCCCeEEEEECCCce--EEEEEecC-CccEEEEEEc------CCCCEEEEeeC-CC---CE
Q psy4393 69 KLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGK--CLKTLKGH-SNYVFCCNFN------PQSNLIVSGSF-DE---SV 135 (247)
Q Consensus 69 ~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~--~~~~~~~~-~~~v~~~~~~------~~~~~l~~~~~-d~---~i 135 (247)
...+-.+.+..+++.+++.-.+|.|.+||...+. .+..++.. ...+.--.|- ....++++.+. ++ ..
T Consensus 129 ~~kvv~Ik~~~~~~~I~vvl~nG~i~~~d~~~~~l~~~~~l~~~~~~~v~ys~fv~~~~~~~~~~~ll~v~~~~~~k~~y 208 (670)
T PF10395_consen 129 DDKVVGIKFSSDGKIIYVVLENGSIQIYDFSENSLEKVPQLKLKSSINVSYSKFVNDFELENGKDLLLTVSQLSNSKLSY 208 (670)
T ss_pred ccceEEEEEecCCCEEEEEEcCCcEEEEeccccccccccccccccccceehhhhhcccccccCCceEEEEEEcCCCcEEE
Confidence 5568889999999999999999999999993322 11112111 1111100111 12234444433 22 36
Q ss_pred EEEECC-CCeEEEeec---CCCCCe--EEEEECCCCCEEEEecCCCeEEEEeCCCceeeeeeccC-----C-CCCeEEEE
Q psy4393 136 RIWDVR-TGKCLKTLP---AHSDPV--SAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD-----D-NPPVSFVK 203 (247)
Q Consensus 136 ~v~d~~-~~~~~~~~~---~~~~~i--~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~-----~-~~~v~~~~ 203 (247)
+++.+. ....+.++. .+.... ...++. +|.+.-- .++.|.+|++..-+..+..... . ...+...+
T Consensus 209 kL~~l~~~~~~~~El~s~~~e~~~~~~s~f~Y~-~G~LY~l--~~~~i~~ysip~f~~~~tI~l~~ii~~~~~~~vSl~~ 285 (670)
T PF10395_consen 209 KLISLSNESSSIFELSSTILENFGLEDSKFCYQ-FGKLYQL--SKKTISSYSIPNFQIQKTISLPSIIDKESDDLVSLKP 285 (670)
T ss_pred EEEEeccCCcceEEeehheeccCCcccceEEEe-CCEEEEE--eCCEEEEEEcCCceEEEEEEechhhccccccceEeec
Confidence 677771 122222221 111111 122332 4553333 6778999998776655444222 1 13344344
Q ss_pred ECCCCCEEEEEEcCCeEEEEECCC
Q psy4393 204 FSPNGKYILAATLDNTLKLWDSKV 227 (247)
Q Consensus 204 ~s~~~~~l~~~~~dg~i~vwd~~~ 227 (247)
.+++ +.|++. ++.|.+.|.+-
T Consensus 286 ~s~n-RvLLs~--~nkIyLld~~~ 306 (670)
T PF10395_consen 286 PSPN-RVLLSV--NNKIYLLDLKF 306 (670)
T ss_pred CCCC-eEEEEc--CCEEEEEeehh
Confidence 4443 444433 67999998754
No 492
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=78.59 E-value=47 Score=29.43 Aligned_cols=127 Identities=17% Similarity=0.259 Sum_probs=72.3
Q ss_pred EEEEEEcCCCCEEEEee-----CCCCEEEEECCCCeEEEeecCCCCCeEEEEECCCCCEEEEecCC-C--eEEEE--eCC
Q psy4393 114 VFCCNFNPQSNLIVSGS-----FDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD-G--LCRIW--DTA 183 (247)
Q Consensus 114 v~~~~~~~~~~~l~~~~-----~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-g--~i~v~--d~~ 183 (247)
+-.++.+|+++++|.+- +.-.+++-|+.+++.+.... .+.....+|.+|++.|+-...+ . --++| .+.
T Consensus 131 Lg~~~~s~D~~~la~s~D~~G~e~y~lr~kdL~tg~~~~d~i--~~~~~~~~Wa~d~~~lfYt~~d~~~rp~kv~~h~~g 208 (682)
T COG1770 131 LGAASISPDHNLLAYSVDVLGDEQYTLRFKDLATGEELPDEI--TNTSGSFAWAADGKTLFYTRLDENHRPDKVWRHRLG 208 (682)
T ss_pred eeeeeeCCCCceEEEEEecccccEEEEEEEecccccccchhh--cccccceEEecCCCeEEEEEEcCCCCcceEEEEecC
Confidence 45678899999988653 33468999999987544322 2234567899988866544433 2 12233 333
Q ss_pred Cceeeee--eccCCCCCeEEEEECCCCCEEEEEEc---CCeEEEEECCCc--ceEEEEccCCcccc
Q psy4393 184 SGQCLKT--LIDDDNPPVSFVKFSPNGKYILAATL---DNTLKLWDSKVV--TPAIICSTPLNLNY 242 (247)
Q Consensus 184 ~~~~~~~--~~~~~~~~v~~~~~s~~~~~l~~~~~---dg~i~vwd~~~~--~~~~~~~~~~~~~~ 242 (247)
+...... +...+..-...+.-+.++++|+.... .+.+++.+.++. .|.++...+-..+|
T Consensus 209 t~~~~d~lvyeE~d~~f~~~v~~s~s~~yi~i~~~~~~tsE~~ll~a~~p~~~p~vv~pr~~g~eY 274 (682)
T COG1770 209 TPGSSDELVYEEKDDRFFLSVGRSRSEAYIVISLGSHITSEVRLLDADDPEAEPKVVLPRENGVEY 274 (682)
T ss_pred CCCCcceEEEEcCCCcEEEEeeeccCCceEEEEcCCCcceeEEEEecCCCCCceEEEEEcCCCcEE
Confidence 3111111 12222222233444566777766543 457888888765 56777666655544
No 493
>COG5308 NUP170 Nuclear pore complex subunit [Intracellular trafficking and secretion]
Probab=77.48 E-value=46 Score=30.75 Aligned_cols=71 Identities=13% Similarity=0.266 Sum_probs=45.1
Q ss_pred ccEEEEEEcCCCCEEEEeeCCCCEEEEECCCC--------eE-------------E---EeecCCCCCeEEEEECCCCCE
Q psy4393 112 NYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG--------KC-------------L---KTLPAHSDPVSAVHFNRDGSL 167 (247)
Q Consensus 112 ~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~--------~~-------------~---~~~~~~~~~i~~~~~~~~~~~ 167 (247)
..|.|+....+|+.+++|..| +.+|.+.-. ++ + ..+..+...|..++.+.....
T Consensus 182 inV~civs~e~GrIFf~g~~d--~nvyEl~Y~~sd~wfnskcskiclTkS~l~sllPs~~~~~ipgetI~Ql~vDqsRg~ 259 (1263)
T COG5308 182 INVRCIVSEEDGRIFFGGEND--PNVYELVYKSSDSWFNSKCSKICLTKSILSSLLPSFFSFGIPGETIKQLAVDQSRGL 259 (1263)
T ss_pred ceeEEEEeccCCcEEEecCCC--CCeEEEEEeccchhhhhhhhccCCcHHHHHhhcccccccCCcccchhheeecccccc
Confidence 457787777789988888776 667765310 00 0 112234456777777776667
Q ss_pred EEEecCCCeEEEEeCCC
Q psy4393 168 IVSSSYDGLCRIWDTAS 184 (247)
Q Consensus 168 l~~~~~dg~i~v~d~~~ 184 (247)
|.+-.....|+-|-+..
T Consensus 260 ly~Lr~kS~Vray~itk 276 (1263)
T COG5308 260 LYVLRKKSAVRAYSITK 276 (1263)
T ss_pred eeeecccceeeeEeeec
Confidence 77777777777776654
No 494
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=76.96 E-value=33 Score=31.61 Aligned_cols=78 Identities=13% Similarity=0.206 Sum_probs=46.9
Q ss_pred CCeEEEEECCCceEEEEEecCCccEEEEEEcCCCCEEEE-eeCCC-----CEEEEECCCCe-EEEeecCCCCCeEEEEEC
Q psy4393 90 DKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVS-GSFDE-----SVRIWDVRTGK-CLKTLPAHSDPVSAVHFN 162 (247)
Q Consensus 90 d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d~-----~i~v~d~~~~~-~~~~~~~~~~~i~~~~~~ 162 (247)
.+.+.+-|.........-..+...+....|+|||+.++. .+-++ .|++-|+++.. .+..+......|..-.+.
T Consensus 328 ~~~L~~~D~dG~n~~~ve~~~~~~i~sP~~SPDG~~vAY~ts~e~~~g~s~vYv~~L~t~~~~~vkl~ve~aaiprwrv~ 407 (912)
T TIGR02171 328 TGNLAYIDYTKGASRAVEIEDTISVYHPDISPDGKKVAFCTGIEGLPGKSSVYVRNLNASGSGLVKLPVENAAIPRWRVL 407 (912)
T ss_pred CCeEEEEecCCCCceEEEecCCCceecCcCCCCCCEEEEEEeecCCCCCceEEEEehhccCCCceEeecccccccceEec
Confidence 357777787654433221345677888999999999988 44333 48888887532 233344434444444455
Q ss_pred CCCCE
Q psy4393 163 RDGSL 167 (247)
Q Consensus 163 ~~~~~ 167 (247)
++|..
T Consensus 408 e~gdt 412 (912)
T TIGR02171 408 ENGDT 412 (912)
T ss_pred CCCCe
Confidence 55543
No 495
>PLN02193 nitrile-specifier protein
Probab=75.78 E-value=50 Score=28.19 Aligned_cols=106 Identities=14% Similarity=0.049 Sum_probs=52.4
Q ss_pred CCCEEEEEcCCC-----eEEEEECCCceEEEEEecC----CccEEEEEEcCCCCEEEEeeCC----CCEEEEECCCCeEE
Q psy4393 80 DSRLLVSGSDDK-----TLKIWELSSGKCLKTLKGH----SNYVFCCNFNPQSNLIVSGSFD----ESVRIWDVRTGKCL 146 (247)
Q Consensus 80 ~~~~l~~~~~d~-----~i~v~d~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~d----~~i~v~d~~~~~~~ 146 (247)
+++.++.|+.++ .+..||+.+.+... +... ...........++++++.++.+ ..+.+||+.+.+-.
T Consensus 278 ~~~iYv~GG~~~~~~~~~~~~yd~~t~~W~~-~~~~~~~~~~R~~~~~~~~~gkiyviGG~~g~~~~dv~~yD~~t~~W~ 356 (470)
T PLN02193 278 EENVYVFGGVSATARLKTLDSYNIVDKKWFH-CSTPGDSFSIRGGAGLEVVQGKVWVVYGFNGCEVDDVHYYDPVQDKWT 356 (470)
T ss_pred CCEEEEECCCCCCCCcceEEEEECCCCEEEe-CCCCCCCCCCCCCcEEEEECCcEEEEECCCCCccCceEEEECCCCEEE
Confidence 455566666443 46778877654321 1110 0000011112245677776655 35889998876532
Q ss_pred Eeec-----CCCCCeEEEEECCCCCEEEEecCC--------------CeEEEEeCCCceee
Q psy4393 147 KTLP-----AHSDPVSAVHFNRDGSLIVSSSYD--------------GLCRIWDTASGQCL 188 (247)
Q Consensus 147 ~~~~-----~~~~~i~~~~~~~~~~~l~~~~~d--------------g~i~v~d~~~~~~~ 188 (247)
..-. .......++. -++++++.|+.. ..+.+||+.+.+..
T Consensus 357 ~~~~~g~~P~~R~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~ndv~~~D~~t~~W~ 415 (470)
T PLN02193 357 QVETFGVRPSERSVFASAA--VGKHIVIFGGEIAMDPLAHVGPGQLTDGTFALDTETLQWE 415 (470)
T ss_pred EeccCCCCCCCcceeEEEE--ECCEEEEECCccCCccccccCccceeccEEEEEcCcCEEE
Confidence 2111 0111112222 245677777753 24778888876643
No 496
>KOG3522|consensus
Probab=75.34 E-value=63 Score=29.53 Aligned_cols=134 Identities=20% Similarity=0.126 Sum_probs=71.6
Q ss_pred EEEEeCCCeEEEEecCCC-eEEEEE---ecccCCeEEEEECCCCCEEEEEcCCCeEEE--------EECCCceEEEEEec
Q psy4393 42 LASSSADKLIKIWGAYDG-KFEKTI---SGHKLGISDVAWSSDSRLLVSGSDDKTLKI--------WELSSGKCLKTLKG 109 (247)
Q Consensus 42 l~~~~~dg~v~iw~~~~~-~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v--------~d~~~~~~~~~~~~ 109 (247)
+..++.++.+.++....+ ..+... ......+.++.+++. -+..|.-||++-+ ||.+ ....+..
T Consensus 550 ic~gtq~ssisissss~~s~ke~~~~~~spe~~~v~~l~~ss~--Slgagl~dgt~a~y~rap~gSwd~e---p~~~~~~ 624 (925)
T KOG3522|consen 550 ICLGTQTSSISISSSSLDSIKEVTSEPPSPEHESVKLLLFSSG--SLGAGLIDGTLAVYGRAPSGSWDGE---PNISIPT 624 (925)
T ss_pred ccccCccceeEEeeccCCcccceeccCCCCchhhhhhhhcccc--ccccCccCCccccccCCCCCCCCCC---Ccccccc
Confidence 455677788888866522 111111 112233444544432 2333444554443 4433 2222233
Q ss_pred CCccEEEEEEcCCCCEEEEeeCCCCEEEEECCCCeEEEeec---CCCCCeEEEEECCCCCEEEEecCCCeEEEEeCCC
Q psy4393 110 HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLP---AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 184 (247)
Q Consensus 110 ~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~---~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~ 184 (247)
...++....+..+ ++-++.+|.+.++...+........ .|...|++|.+..++-+++.++.+ .+++++..+
T Consensus 625 g~lPvrsla~~ed---~~was~gG~V~vi~~tt~~~~~~leahqee~~~Vthm~~~~~gVwvafasG~-~~rlfhtet 698 (925)
T KOG3522|consen 625 GSLPVRSLAFQED---FVWASEGGCVHVIPSTTFIRSWDLEAHQEEAHSVTHMLYLDNGVWVAFASGD-EERLFHTET 698 (925)
T ss_pred CCccccchhhhhc---eeeeecCCceEEEechhccccchhHHHHhhcceEEEEEeeCCceEEEEcCCC-EEEEecccc
Confidence 3445555555443 5667788999999887654444333 344578999988887776655433 445555444
No 497
>KOG2006|consensus
Probab=75.00 E-value=12 Score=34.36 Aligned_cols=69 Identities=9% Similarity=0.125 Sum_probs=48.0
Q ss_pred EEEECCCCCEEEEEeCCCeEEEEecCCCe--EEEE---EecccCCeEEEEECCCCCEEEEEcCCCeEEEEECCC
Q psy4393 32 SVKFSPNGEWLASSSADKLIKIWGAYDGK--FEKT---ISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSS 100 (247)
Q Consensus 32 ~~~~s~~~~~l~~~~~dg~v~iw~~~~~~--~~~~---~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~ 100 (247)
+.........+++|...|.+.+++...-. .... -.++...+..+.|+|+++.++.+-..|...+|....
T Consensus 153 c~SV~~e~~lla~G~~~g~v~~y~~~~~~ssl~~s~~~~~~~ti~~~~~~~~p~~~~~av~~~~g~ls~wS~~g 226 (1023)
T KOG2006|consen 153 CCSVNHEFQLLAYGTPVGEVLLYSIDEANSSLVFSNRDDDTLTVPDNNSSWRPDQNGFAVTWEKGFLAFWSNQG 226 (1023)
T ss_pred eeeccchhhhheecccccceeehhhhhhccceeeecccCccccccccccCcCCccceeeeeecccceEEecccc
Confidence 34445566788899999999999875322 2111 123344667788999999998888888888887653
No 498
>PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3.1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A.
Probab=74.45 E-value=48 Score=27.39 Aligned_cols=186 Identities=11% Similarity=0.183 Sum_probs=101.0
Q ss_pred CCCEEEEEeCCCeEEEEecCCCeEEEEEecccCCeEEEEEC----CCCCE--EEEEc-CC---CeEEEEECC--CceEEE
Q psy4393 38 NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS----SDSRL--LVSGS-DD---KTLKIWELS--SGKCLK 105 (247)
Q Consensus 38 ~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~--l~~~~-~d---~~i~v~d~~--~~~~~~ 105 (247)
...+++...+++-+.+||+. ++.+..+.. ...+.+... -.|+. |+.++ .+ ..|++|.+. ++. +.
T Consensus 67 ~kSlIigTdK~~GL~VYdL~-Gk~lq~~~~--Gr~NNVDvrygf~l~g~~vDlavas~R~~g~n~l~~f~id~~~g~-L~ 142 (381)
T PF02333_consen 67 AKSLIIGTDKKGGLYVYDLD-GKELQSLPV--GRPNNVDVRYGFPLNGKTVDLAVASDRSDGRNSLRLFRIDPDTGE-LT 142 (381)
T ss_dssp GG-EEEEEETTTEEEEEETT-S-EEEEE-S--S-EEEEEEEEEEEETTEEEEEEEEEE-CCCT-EEEEEEEETTTTE-EE
T ss_pred ccceEEEEeCCCCEEEEcCC-CcEEEeecC--CCcceeeeecceecCCceEEEEEEecCcCCCCeEEEEEecCCCCc-ce
Confidence 44577778889999999985 444444432 223322221 13443 34443 22 468898765 333 33
Q ss_pred EEec-------CCccEEEEEE--cC-CCC-EEEEeeCCCCEEEEECC---CC----eEEEeecCCCCCeEEEEECCCCCE
Q psy4393 106 TLKG-------HSNYVFCCNF--NP-QSN-LIVSGSFDESVRIWDVR---TG----KCLKTLPAHSDPVSAVHFNRDGSL 167 (247)
Q Consensus 106 ~~~~-------~~~~v~~~~~--~~-~~~-~l~~~~~d~~i~v~d~~---~~----~~~~~~~~~~~~i~~~~~~~~~~~ 167 (247)
.+.. ....+..+|+ ++ ++. +.+....+|.+.-|.+. .+ +.++.+... ..+..+..+.....
T Consensus 143 ~v~~~~~p~~~~~~e~yGlcly~~~~~g~~ya~v~~k~G~~~Qy~L~~~~~g~v~~~lVR~f~~~-sQ~EGCVVDDe~g~ 221 (381)
T PF02333_consen 143 DVTDPAAPIATDLSEPYGLCLYRSPSTGALYAFVNGKDGRVEQYELTDDGDGKVSATLVREFKVG-SQPEGCVVDDETGR 221 (381)
T ss_dssp E-CBTTC-EE-SSSSEEEEEEEE-TTT--EEEEEEETTSEEEEEEEEE-TTSSEEEEEEEEEE-S-S-EEEEEEETTTTE
T ss_pred EcCCCCcccccccccceeeEEeecCCCCcEEEEEecCCceEEEEEEEeCCCCcEeeEEEEEecCC-CcceEEEEecccCC
Confidence 3221 1223556665 33 344 44556778888777664 23 356677653 46777788887788
Q ss_pred EEEecCCCeEEEEeCCCc-----eeeeeecc-CCCCCeEEEEE--CCCC-CEEEEEEc-CCeEEEEECCCc
Q psy4393 168 IVSSSYDGLCRIWDTASG-----QCLKTLID-DDNPPVSFVKF--SPNG-KYILAATL-DNTLKLWDSKVV 228 (247)
Q Consensus 168 l~~~~~dg~i~v~d~~~~-----~~~~~~~~-~~~~~v~~~~~--s~~~-~~l~~~~~-dg~i~vwd~~~~ 228 (247)
|+.+-++.-|.-|+.+.. +.+..... .....+..+++ .+++ .||+++++ +++..|||....
T Consensus 222 LYvgEE~~GIW~y~Aep~~~~~~~~v~~~~g~~l~aDvEGlaly~~~~g~gYLivSsQG~~sf~Vy~r~~~ 292 (381)
T PF02333_consen 222 LYVGEEDVGIWRYDAEPEGGNDRTLVASADGDGLVADVEGLALYYGSDGKGYLIVSSQGDNSFAVYDREGP 292 (381)
T ss_dssp EEEEETTTEEEEEESSCCC-S--EEEEEBSSSSB-S-EEEEEEEE-CCC-EEEEEEEGGGTEEEEEESSTT
T ss_pred EEEecCccEEEEEecCCCCCCcceeeecccccccccCccceEEEecCCCCeEEEEEcCCCCeEEEEecCCC
Confidence 999999988888887632 11111111 11234555555 3444 36766664 679999997753
No 499
>PF13570 PQQ_3: PQQ-like domain; PDB: 3HXJ_B 3Q54_A.
Probab=74.38 E-value=7.8 Score=19.90 Aligned_cols=20 Identities=25% Similarity=0.277 Sum_probs=15.7
Q ss_pred CCEEEEEEcCCeEEEEECCC
Q psy4393 208 GKYILAATLDNTLKLWDSKV 227 (247)
Q Consensus 208 ~~~l~~~~~dg~i~vwd~~~ 227 (247)
+..|+.++.||.+..+|.++
T Consensus 21 ~g~vyv~~~dg~l~ald~~t 40 (40)
T PF13570_consen 21 GGRVYVGTGDGNLYALDAAT 40 (40)
T ss_dssp TSEEEEE-TTSEEEEEETT-
T ss_pred CCEEEEEcCCCEEEEEeCCC
Confidence 56899999999999999764
No 500
>PF11635 Med16: Mediator complex subunit 16; InterPro: IPR021665 Mediator is a large complex of up to 33 proteins that is conserved from plants through fungi to humans - the number and representation of individual subunits varying with species [],[]. It is arranged into four different sections, a core, a head, a tail and a kinase-activity part, and the number of subunits within each of these is what varies with species. Overall, Mediator regulates the transcriptional activity of RNA polymerase II but it would appear that each of the four different sections has a slightly different function. Med16 is one of the subunits of the Tail portion of the Mediator complex and is required for lipopolysaccharide gene-expression []. Several members including the human protein, Q9Y2X0 from SWISSPROT, have one or more WD40 domains on them, PF00400 from PFAM.
Probab=73.23 E-value=75 Score=29.09 Aligned_cols=67 Identities=18% Similarity=0.103 Sum_probs=47.3
Q ss_pred CeEEEEECCCCCEEEEecCCCeEEEEeCCCceeeeee----cc--------------CCCCCeEEEEECCCCCEEEEEEc
Q psy4393 155 PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL----ID--------------DDNPPVSFVKFSPNGKYILAATL 216 (247)
Q Consensus 155 ~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~----~~--------------~~~~~v~~~~~s~~~~~l~~~~~ 216 (247)
.|.++....-+.+++.+..||.|.++|-.+-+.+... .. ....+...++|||.+.-++.-..
T Consensus 261 ~V~si~~~~~~~~v~~~~~DGsI~~~dr~t~~~~~~~~~~~~~~~~v~s~~~~Gf~fp~~~~~~~vafSPt~c~~v~~~~ 340 (753)
T PF11635_consen 261 RVVSITSPELDIVVAFAFSDGSIEFRDRNTMKELNETRTNGEPPNTVTSLFQAGFHFPCIQPPLHVAFSPTMCSLVQIDE 340 (753)
T ss_pred eEEEEEecccCcEEEEEEcCCeEEEEecCcchhhcccccccCCccccccccccccccccCCCCceEEECcccceEEEEec
Confidence 4666776667778899999999999998765433222 00 01112345789999999999999
Q ss_pred CCeEE
Q psy4393 217 DNTLK 221 (247)
Q Consensus 217 dg~i~ 221 (247)
+|.+.
T Consensus 341 ~~~~~ 345 (753)
T PF11635_consen 341 DGKTK 345 (753)
T ss_pred CCCce
Confidence 98855
Done!