Your job contains 1 sequence.
>psy4393
MNLSNAPSSSSNPKPNYVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK
FEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFN
PQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW
DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTPLNL
NYFYRNL
The BLAST search returned 6 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy4393
(247 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 1087 4.8e-110 1
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 1084 1.0e-109 1
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 1084 1.0e-109 1
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 1084 1.0e-109 1
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 1084 1.0e-109 1
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 1084 1.0e-109 1
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 1084 1.0e-109 1
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 1084 1.0e-109 1
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 909 3.5e-91 1
WB|WBGene00006474 - symbol:wdr-5.1 species:6239 "Caenorha... 842 4.4e-84 1
UNIPROTKB|Q17963 - symbol:tag-125 "WD repeat-containing p... 842 4.4e-84 1
UNIPROTKB|A8X8C6 - symbol:tag-125 "WD repeat-containing p... 839 9.1e-84 1
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 829 1.0e-82 1
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 760 2.1e-75 1
TAIR|locus:2140215 - symbol:WDR5b "AT4G02730" species:370... 686 1.5e-67 1
ASPGD|ASPL0000017294 - symbol:AN3926 species:162425 "Emer... 623 7.1e-61 1
POMBASE|SPBC354.03 - symbol:swd3 "WD repeat protein Swd3"... 570 2.9e-55 1
UNIPROTKB|G4MKJ2 - symbol:MGG_04473 "WD repeat containing... 460 1.2e-45 2
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 456 7.9e-42 1
CGD|CAL0005013 - symbol:SWD3 species:5476 "Candida albica... 440 1.7e-41 1
ZFIN|ZDB-GENE-040116-2 - symbol:pafah1b1a "platelet-activ... 348 1.5e-35 2
ASPGD|ASPL0000038644 - symbol:AN10391 species:162425 "Eme... 383 3.3e-35 1
ASPGD|ASPL0000006405 - symbol:AN6960 species:162425 "Emer... 390 1.4e-34 1
ASPGD|ASPL0000031743 - symbol:AN8505 species:162425 "Emer... 384 1.9e-34 1
DICTYBASE|DDB_G0288375 - symbol:lis1 "lissencephaly-1 hom... 367 9.5e-34 1
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 367 9.5e-34 1
UNIPROTKB|Q0P593 - symbol:WDR69 "Outer row dynein assembl... 365 1.5e-33 1
ZFIN|ZDB-GENE-050419-255 - symbol:daw1 "dynein assembly f... 362 3.2e-33 1
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 361 4.1e-33 1
DICTYBASE|DDB_G0275045 - symbol:gpbB "Guanine nucleotide-... 360 5.2e-33 1
UNIPROTKB|E2RGD1 - symbol:POC1A "Uncharacterized protein"... 357 1.1e-32 1
DICTYBASE|DDB_G0282189 - symbol:tupA "transcriptional rep... 357 3.1e-32 1
RGD|1565004 - symbol:Poc1a "POC1 centriolar protein homol... 352 3.7e-32 1
RGD|1561436 - symbol:LOC363267 "hypothetical protein LOC3... 351 4.7e-32 1
UNIPROTKB|Q2TBP4 - symbol:POC1A "POC1 centriolar protein ... 347 1.3e-31 1
UNIPROTKB|A5D7P3 - symbol:PAFAH1B1 "Platelet-activating f... 346 1.6e-31 1
UNIPROTKB|P43033 - symbol:PAFAH1B1 "Platelet-activating f... 346 1.6e-31 1
UNIPROTKB|E2QY31 - symbol:PAFAH1B1 "Uncharacterized prote... 346 1.6e-31 1
UNIPROTKB|J9P388 - symbol:PAFAH1B1 "Uncharacterized prote... 346 1.6e-31 1
UNIPROTKB|I3L2U8 - symbol:PAFAH1B1 "Platelet-activating f... 346 1.6e-31 1
UNIPROTKB|P43034 - symbol:PAFAH1B1 "Platelet-activating f... 346 1.6e-31 1
UNIPROTKB|F2Z521 - symbol:PAFAH1B1 "Platelet-activating f... 346 1.6e-31 1
MGI|MGI:109520 - symbol:Pafah1b1 "platelet-activating fac... 346 1.6e-31 1
RGD|620331 - symbol:Pafah1b1 "platelet-activating factor ... 346 1.6e-31 1
UNIPROTKB|P63004 - symbol:Pafah1b1 "Platelet-activating f... 346 1.6e-31 1
TAIR|locus:2043929 - symbol:AT2G43770 "AT2G43770" species... 346 1.6e-31 1
FB|FBgn0015754 - symbol:Lis-1 "Lissencephaly-1" species:7... 316 1.8e-31 2
UNIPROTKB|Q9PTR5 - symbol:PAFAH1B1 "Lissencephaly-1 homol... 345 2.0e-31 1
MGI|MGI:1917485 - symbol:Poc1a "POC1 centriolar protein h... 345 2.0e-31 1
UNIPROTKB|F1N9W1 - symbol:FBXW7 "Uncharacterized protein"... 349 2.6e-31 1
RGD|2321145 - symbol:Fbxw7 "F-box and WD repeat domain co... 349 2.6e-31 1
FB|FBgn0041171 - symbol:ago "archipelago" species:7227 "D... 357 2.8e-31 1
UNIPROTKB|Q9GL51 - symbol:PAFAH1B1 "Platelet-activating f... 343 3.3e-31 1
ZFIN|ZDB-GENE-031118-54 - symbol:poc1b "POC1 centriolar p... 343 3.3e-31 1
UNIPROTKB|F1MNN4 - symbol:FBXW7 "Uncharacterized protein"... 349 3.5e-31 1
MGI|MGI:1354695 - symbol:Fbxw7 "F-box and WD-40 domain pr... 349 3.6e-31 1
UNIPROTKB|Q8NBT0 - symbol:POC1A "POC1 centriolar protein ... 342 4.2e-31 1
UNIPROTKB|F1SIZ2 - symbol:POC1A "Uncharacterized protein"... 342 4.2e-31 1
UNIPROTKB|E9PFC6 - symbol:POC1A "POC1 centriolar protein ... 342 4.2e-31 1
UNIPROTKB|Q969H0 - symbol:FBXW7 "F-box/WD repeat-containi... 349 5.4e-31 1
SGD|S000000379 - symbol:SWD3 "Essential subunit of the CO... 341 5.4e-31 1
UNIPROTKB|E2QUZ3 - symbol:FBXW7 "Uncharacterized protein"... 349 5.5e-31 1
ZFIN|ZDB-GENE-090313-79 - symbol:fbxw7 "F-box and WD repe... 349 6.6e-31 1
UNIPROTKB|F1NUJ8 - symbol:POC1A "Uncharacterized protein"... 339 8.8e-31 1
UNIPROTKB|Q8TC44 - symbol:POC1B "POC1 centriolar protein ... 338 1.1e-30 1
UNIPROTKB|G3V1X0 - symbol:POC1B "POC1 centriolar protein ... 338 1.1e-30 1
UNIPROTKB|F1P8S8 - symbol:POC1B "Uncharacterized protein"... 336 1.8e-30 1
SGD|S000004212 - symbol:UTP13 "Nucleolar protein" species... 345 2.1e-30 1
FB|FBgn0036733 - symbol:U4-U6-60K "U4-U6 small nuclear ri... 338 3.2e-30 1
UNIPROTKB|A5PKH9 - symbol:WDR51B "Uncharacterized protein... 333 3.8e-30 1
UNIPROTKB|Q5RD06 - symbol:POC1B "POC1 centriolar protein ... 332 4.9e-30 1
ZFIN|ZDB-GENE-040116-3 - symbol:pafah1b1b "platelet-activ... 331 6.2e-30 1
UNIPROTKB|Q96DI7 - symbol:SNRNP40 "U5 small nuclear ribon... 330 7.9e-30 1
UNIPROTKB|F1MLP7 - symbol:SNRNP40 "U5 small nuclear ribon... 330 7.9e-30 1
UNIPROTKB|F1SVA6 - symbol:SNRNP40 "Uncharacterized protei... 330 7.9e-30 1
UNIPROTKB|B4DQJ1 - symbol:SNRNP40 "U5 small nuclear ribon... 330 7.9e-30 1
UNIPROTKB|Q2HJH6 - symbol:SNRNP40 "U5 small nuclear ribon... 330 7.9e-30 1
RGD|1309198 - symbol:Snrnp40 "small nuclear ribonucleopro... 330 7.9e-30 1
MGI|MGI:1913835 - symbol:Snrnp40 "small nuclear ribonucle... 329 1.0e-29 1
TAIR|locus:2008159 - symbol:RACK1B_AT "AT1G48630" species... 327 1.6e-29 1
WB|WBGene00004767 - symbol:sel-10 species:6239 "Caenorhab... 330 3.3e-29 1
UNIPROTKB|Q93794 - symbol:sel-10 "F-box/WD repeat-contain... 330 3.3e-29 1
TAIR|locus:2092707 - symbol:RACK1C_AT "AT3G18130" species... 324 3.4e-29 1
ZFIN|ZDB-GENE-030131-5143 - symbol:prpf4 "PRP4 pre-mRNA p... 326 4.1e-29 1
TAIR|locus:2194060 - symbol:ATARCA "AT1G18080" species:37... 323 4.4e-29 1
FB|FBgn0010356 - symbol:Taf5 "TBP-associated factor 5" sp... 331 4.7e-29 1
ZFIN|ZDB-GENE-040426-978 - symbol:snrnp40 "small nuclear ... 322 5.6e-29 1
CGD|CAL0000165 - symbol:orf19.536 species:5476 "Candida a... 331 6.5e-29 1
UNIPROTKB|F1NUK8 - symbol:SNRNP40 "Uncharacterized protei... 320 9.1e-29 1
UNIPROTKB|P49027 - symbol:RACK1A "Guanine nucleotide-bind... 319 1.2e-28 1
POMBASE|SPAC6B12.15 - symbol:cpc2 "RACK1 ortholog Cpc2" s... 319 1.2e-28 1
RGD|2323942 - symbol:Poc1b "POC1 centriolar protein homol... 320 1.2e-28 1
ZFIN|ZDB-GENE-051120-180 - symbol:taf5 "TAF5 RNA polymera... 327 1.5e-28 1
POMBASE|SPCC16A11.02 - symbol:utp13 "U3 snoRNP-associated... 327 1.6e-28 1
TAIR|locus:2179300 - symbol:TAF5 "AT5G25150" species:3702... 322 3.9e-28 1
ZFIN|ZDB-GENE-040426-1993 - symbol:poc1a "POC1 centriolar... 314 3.9e-28 1
UNIPROTKB|Q3MHE2 - symbol:PRPF4 "U4/U6 small nuclear ribo... 316 6.7e-28 1
UNIPROTKB|O43172 - symbol:PRPF4 "U4/U6 small nuclear ribo... 316 6.7e-28 1
UNIPROTKB|F1PZB0 - symbol:PRPF4 "Uncharacterized protein"... 316 7.8e-28 1
UNIPROTKB|I3LDL8 - symbol:PRPF4 "Uncharacterized protein"... 316 8.0e-28 1
WARNING: Descriptions of 2015 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 1087 (387.7 bits), Expect = 4.8e-110, P = 4.8e-110
Identities = 203/208 (97%), Positives = 206/208 (99%)
Query: 17 YVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA 76
Y LKFTLAGHTKAVS+VKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA
Sbjct: 62 YTLKFTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA 121
Query: 77 WSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 136
WSSDSRLLVSGSDDKTLK+WELS+GK LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR
Sbjct: 122 WSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 181
Query: 137 IWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 196
IWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN
Sbjct: 182 IWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 241
Query: 197 PPVSFVKFSPNGKYILAATLDNTLKLWD 224
PPVSFVKFSPNGKYILAATLDNTLKLWD
Sbjct: 242 PPVSFVKFSPNGKYILAATLDNTLKLWD 269
Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
Identities = 81/206 (39%), Positives = 124/206 (60%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
T++GH +S V +S + L S S DK +K+W GK KT+ GH + ++ S
Sbjct: 109 TISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQS 168
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
L+VSGS D++++IW++ +GKCLKTL HS+ V +FN +LIVS S+D RIWD
Sbjct: 169 NLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA 228
Query: 142 TGKCLKTL-PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 200
+G+CLKTL + PVS V F+ +G I++++ D ++WD + G+CLKT N
Sbjct: 229 SGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYC 288
Query: 201 -FVKFS-PNGKYILAATLDNTLKLWD 224
F FS GK+I++ + DN + +W+
Sbjct: 289 IFANFSVTGGKWIVSGSEDNMVYIWN 314
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 72/183 (39%), Positives = 111/183 (60%)
Query: 44 SSSADKL-IKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGK 102
SS+++K + + Y KF T++GH +S V +S + L S S DK +KIW GK
Sbjct: 48 SSASNKSSLSVKPNYTLKF--TLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGK 105
Query: 103 CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFN 162
KT+ GH + ++ S L+VSGS D+++++W++ TGK LKTL HS+ V +FN
Sbjct: 106 FEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFN 165
Query: 163 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 222
+LIVS S+D RIWD +G+CLKTL + PVS V F+ +G I++++ D ++
Sbjct: 166 PQSNLIVSGSFDESVRIWDVRTGKCLKTL-PAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 224
Query: 223 WDS 225
WD+
Sbjct: 225 WDT 227
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 71/210 (33%), Positives = 104/210 (49%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GH+ V F+P + S S D+ ++IW GK KT+ H +S V ++ D
Sbjct: 151 TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDG 210
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNY-VFCCNFNPQSNLIVSGSFDESVRIWDV 140
L+VS S D +IW+ +SG+CLKTL N V F+P I++ + D ++++WD
Sbjct: 211 SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDY 270
Query: 141 RTGKCLKTLPAHSDPVSAVHFN---RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 197
GKCLKT H + + N G IVS S D + IW+ S + ++ L
Sbjct: 271 SKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKL-QGHTD 329
Query: 198 PVSFVKFSPNGKYILAATLDN--TLKLWDS 225
V P I +A L+N T+KLW S
Sbjct: 330 TVLCTACHPTENIIASAALENDKTIKLWKS 359
Score = 193 (73.0 bits), Expect = 7.7e-15, P = 7.7e-15
Identities = 41/125 (32%), Positives = 72/125 (57%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
LK + VS VKFSPNG+++ +++ D +K+W GK KT +GHK + +
Sbjct: 233 LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFAN 292
Query: 79 ---SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF--DE 133
+ + +VSGS+D + IW L S + ++ L+GH++ V C +P N+I S + D+
Sbjct: 293 FSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHPTENIIASAALENDK 352
Query: 134 SVRIW 138
++++W
Sbjct: 353 TIKLW 357
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 1084 (386.6 bits), Expect = 1.0e-109, P = 1.0e-109
Identities = 202/208 (97%), Positives = 205/208 (98%)
Query: 17 YVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA 76
Y LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA
Sbjct: 35 YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA 94
Query: 77 WSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 136
WSSDS LLVS SDDKTLKIW++SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR
Sbjct: 95 WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 154
Query: 137 IWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 196
IWDV+TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN
Sbjct: 155 IWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 214
Query: 197 PPVSFVKFSPNGKYILAATLDNTLKLWD 224
PPVSFVKFSPNGKYILAATLDNTLKLWD
Sbjct: 215 PPVSFVKFSPNGKYILAATLDNTLKLWD 242
Score = 403 (146.9 bits), Expect = 1.5e-37, P = 1.5e-37
Identities = 82/206 (39%), Positives = 125/206 (60%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
T++GH +S V +S + L S+S DK +KIW GK KT+ GH + ++ S
Sbjct: 82 TISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS 141
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
L+VSGS D++++IW++ +GKCLKTL HS+ V +FN +LIVS S+D RIWD
Sbjct: 142 NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA 201
Query: 142 TGKCLKTL-PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 200
+G+CLKTL + PVS V F+ +G I++++ D ++WD + G+CLKT N
Sbjct: 202 SGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYC 261
Query: 201 -FVKFS-PNGKYILAATLDNTLKLWD 224
F FS GK+I++ + DN + +W+
Sbjct: 262 IFANFSVTGGKWIVSGSEDNLVYIWN 287
Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 74/183 (40%), Positives = 110/183 (60%)
Query: 43 ASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGK 102
+S++ K + Y KF T++GH +S V +S + L S S DK +KIW GK
Sbjct: 21 SSATQSKPTPVKPNYALKF--TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK 78
Query: 103 CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFN 162
KT+ GH + ++ SNL+VS S D++++IWDV +GKCLKTL HS+ V +FN
Sbjct: 79 FEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFN 138
Query: 163 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 222
+LIVS S+D RIWD +G+CLKTL + PVS V F+ +G I++++ D ++
Sbjct: 139 PQSNLIVSGSFDESVRIWDVKTGKCLKTL-PAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 197
Query: 223 WDS 225
WD+
Sbjct: 198 WDT 200
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 71/210 (33%), Positives = 106/210 (50%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GH+ V F+P + S S D+ ++IW GK KT+ H +S V ++ D
Sbjct: 124 TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDG 183
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNY-VFCCNFNPQSNLIVSGSFDESVRIWDV 140
L+VS S D +IW+ +SG+CLKTL N V F+P I++ + D ++++WD
Sbjct: 184 SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDY 243
Query: 141 RTGKCLKTLPAHSDPVSAVHFN---RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 197
GKCLKT H + + N G IVS S D L IW+ + + ++ L +
Sbjct: 244 SKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDV 303
Query: 198 PVSFVKFSPNGKYILAATLDN--TLKLWDS 225
+S P I +A L+N T+KLW S
Sbjct: 304 VIS-TACHPTENIIASAALENDKTIKLWKS 332
Score = 216 (81.1 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 44/121 (36%), Positives = 68/121 (56%)
Query: 106 TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDG 165
TL GH+ V F+P + S S D+ ++IW GK KT+ H +S V ++ D
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 99
Query: 166 SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225
+L+VS+S D +IWD +SG+CLKTL N V F+P I++ + D ++++WD
Sbjct: 100 NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNY-VFCCNFNPQSNLIVSGSFDESVRIWDV 158
Query: 226 K 226
K
Sbjct: 159 K 159
Score = 181 (68.8 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 39/125 (31%), Positives = 71/125 (56%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
LK + VS VKFSPNG+++ +++ D +K+W GK KT +GHK + +
Sbjct: 206 LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFAN 265
Query: 79 ---SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF--DE 133
+ + +VSGS+D + IW L + + ++ L+GH++ V +P N+I S + D+
Sbjct: 266 FSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDK 325
Query: 134 SVRIW 138
++++W
Sbjct: 326 TIKLW 330
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 1084 (386.6 bits), Expect = 1.0e-109, P = 1.0e-109
Identities = 202/208 (97%), Positives = 205/208 (98%)
Query: 17 YVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA 76
Y LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA
Sbjct: 35 YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA 94
Query: 77 WSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 136
WSSDS LLVS SDDKTLKIW++SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR
Sbjct: 95 WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 154
Query: 137 IWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 196
IWDV+TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN
Sbjct: 155 IWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 214
Query: 197 PPVSFVKFSPNGKYILAATLDNTLKLWD 224
PPVSFVKFSPNGKYILAATLDNTLKLWD
Sbjct: 215 PPVSFVKFSPNGKYILAATLDNTLKLWD 242
Score = 403 (146.9 bits), Expect = 1.5e-37, P = 1.5e-37
Identities = 82/206 (39%), Positives = 125/206 (60%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
T++GH +S V +S + L S+S DK +KIW GK KT+ GH + ++ S
Sbjct: 82 TISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS 141
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
L+VSGS D++++IW++ +GKCLKTL HS+ V +FN +LIVS S+D RIWD
Sbjct: 142 NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA 201
Query: 142 TGKCLKTL-PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 200
+G+CLKTL + PVS V F+ +G I++++ D ++WD + G+CLKT N
Sbjct: 202 SGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYC 261
Query: 201 -FVKFS-PNGKYILAATLDNTLKLWD 224
F FS GK+I++ + DN + +W+
Sbjct: 262 IFANFSVTGGKWIVSGSEDNLVYIWN 287
Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 74/183 (40%), Positives = 110/183 (60%)
Query: 43 ASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGK 102
+S++ K + Y KF T++GH +S V +S + L S S DK +KIW GK
Sbjct: 21 SSATQSKPTPVKPNYALKF--TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK 78
Query: 103 CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFN 162
KT+ GH + ++ SNL+VS S D++++IWDV +GKCLKTL HS+ V +FN
Sbjct: 79 FEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFN 138
Query: 163 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 222
+LIVS S+D RIWD +G+CLKTL + PVS V F+ +G I++++ D ++
Sbjct: 139 PQSNLIVSGSFDESVRIWDVKTGKCLKTL-PAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 197
Query: 223 WDS 225
WD+
Sbjct: 198 WDT 200
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 71/210 (33%), Positives = 106/210 (50%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GH+ V F+P + S S D+ ++IW GK KT+ H +S V ++ D
Sbjct: 124 TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDG 183
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNY-VFCCNFNPQSNLIVSGSFDESVRIWDV 140
L+VS S D +IW+ +SG+CLKTL N V F+P I++ + D ++++WD
Sbjct: 184 SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDY 243
Query: 141 RTGKCLKTLPAHSDPVSAVHFN---RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 197
GKCLKT H + + N G IVS S D L IW+ + + ++ L +
Sbjct: 244 SKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDV 303
Query: 198 PVSFVKFSPNGKYILAATLDN--TLKLWDS 225
+S P I +A L+N T+KLW S
Sbjct: 304 VIS-TACHPTENIIASAALENDKTIKLWKS 332
Score = 216 (81.1 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 44/121 (36%), Positives = 68/121 (56%)
Query: 106 TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDG 165
TL GH+ V F+P + S S D+ ++IW GK KT+ H +S V ++ D
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 99
Query: 166 SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225
+L+VS+S D +IWD +SG+CLKTL N V F+P I++ + D ++++WD
Sbjct: 100 NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNY-VFCCNFNPQSNLIVSGSFDESVRIWDV 158
Query: 226 K 226
K
Sbjct: 159 K 159
Score = 181 (68.8 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 39/125 (31%), Positives = 71/125 (56%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
LK + VS VKFSPNG+++ +++ D +K+W GK KT +GHK + +
Sbjct: 206 LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFAN 265
Query: 79 ---SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF--DE 133
+ + +VSGS+D + IW L + + ++ L+GH++ V +P N+I S + D+
Sbjct: 266 FSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDK 325
Query: 134 SVRIW 138
++++W
Sbjct: 326 TIKLW 330
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 1084 (386.6 bits), Expect = 1.0e-109, P = 1.0e-109
Identities = 202/208 (97%), Positives = 205/208 (98%)
Query: 17 YVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA 76
Y LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA
Sbjct: 35 YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA 94
Query: 77 WSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 136
WSSDS LLVS SDDKTLKIW++SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR
Sbjct: 95 WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 154
Query: 137 IWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 196
IWDV+TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN
Sbjct: 155 IWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 214
Query: 197 PPVSFVKFSPNGKYILAATLDNTLKLWD 224
PPVSFVKFSPNGKYILAATLDNTLKLWD
Sbjct: 215 PPVSFVKFSPNGKYILAATLDNTLKLWD 242
Score = 403 (146.9 bits), Expect = 1.5e-37, P = 1.5e-37
Identities = 82/206 (39%), Positives = 125/206 (60%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
T++GH +S V +S + L S+S DK +KIW GK KT+ GH + ++ S
Sbjct: 82 TISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS 141
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
L+VSGS D++++IW++ +GKCLKTL HS+ V +FN +LIVS S+D RIWD
Sbjct: 142 NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA 201
Query: 142 TGKCLKTL-PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 200
+G+CLKTL + PVS V F+ +G I++++ D ++WD + G+CLKT N
Sbjct: 202 SGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYC 261
Query: 201 -FVKFS-PNGKYILAATLDNTLKLWD 224
F FS GK+I++ + DN + +W+
Sbjct: 262 IFANFSVTGGKWIVSGSEDNLVYIWN 287
Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 74/183 (40%), Positives = 110/183 (60%)
Query: 43 ASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGK 102
A+++ K + Y KF T++GH +S V +S + L S S DK +KIW GK
Sbjct: 21 AAATQSKPTPVKPNYALKF--TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK 78
Query: 103 CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFN 162
KT+ GH + ++ SNL+VS S D++++IWDV +GKCLKTL HS+ V +FN
Sbjct: 79 FEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFN 138
Query: 163 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 222
+LIVS S+D RIWD +G+CLKTL + PVS V F+ +G I++++ D ++
Sbjct: 139 PQSNLIVSGSFDESVRIWDVKTGKCLKTL-PAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 197
Query: 223 WDS 225
WD+
Sbjct: 198 WDT 200
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 71/210 (33%), Positives = 106/210 (50%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GH+ V F+P + S S D+ ++IW GK KT+ H +S V ++ D
Sbjct: 124 TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDG 183
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNY-VFCCNFNPQSNLIVSGSFDESVRIWDV 140
L+VS S D +IW+ +SG+CLKTL N V F+P I++ + D ++++WD
Sbjct: 184 SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDY 243
Query: 141 RTGKCLKTLPAHSDPVSAVHFN---RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 197
GKCLKT H + + N G IVS S D L IW+ + + ++ L +
Sbjct: 244 SKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDV 303
Query: 198 PVSFVKFSPNGKYILAATLDN--TLKLWDS 225
+S P I +A L+N T+KLW S
Sbjct: 304 VIS-TACHPTENIIASAALENDKTIKLWKS 332
Score = 216 (81.1 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 44/121 (36%), Positives = 68/121 (56%)
Query: 106 TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDG 165
TL GH+ V F+P + S S D+ ++IW GK KT+ H +S V ++ D
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 99
Query: 166 SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225
+L+VS+S D +IWD +SG+CLKTL N V F+P I++ + D ++++WD
Sbjct: 100 NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNY-VFCCNFNPQSNLIVSGSFDESVRIWDV 158
Query: 226 K 226
K
Sbjct: 159 K 159
Score = 181 (68.8 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 39/125 (31%), Positives = 71/125 (56%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
LK + VS VKFSPNG+++ +++ D +K+W GK KT +GHK + +
Sbjct: 206 LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFAN 265
Query: 79 ---SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF--DE 133
+ + +VSGS+D + IW L + + ++ L+GH++ V +P N+I S + D+
Sbjct: 266 FSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDK 325
Query: 134 SVRIW 138
++++W
Sbjct: 326 TIKLW 330
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 1084 (386.6 bits), Expect = 1.0e-109, P = 1.0e-109
Identities = 202/208 (97%), Positives = 205/208 (98%)
Query: 17 YVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA 76
Y LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA
Sbjct: 35 YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA 94
Query: 77 WSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 136
WSSDS LLVS SDDKTLKIW++SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR
Sbjct: 95 WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 154
Query: 137 IWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 196
IWDV+TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN
Sbjct: 155 IWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 214
Query: 197 PPVSFVKFSPNGKYILAATLDNTLKLWD 224
PPVSFVKFSPNGKYILAATLDNTLKLWD
Sbjct: 215 PPVSFVKFSPNGKYILAATLDNTLKLWD 242
Score = 403 (146.9 bits), Expect = 1.5e-37, P = 1.5e-37
Identities = 82/206 (39%), Positives = 125/206 (60%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
T++GH +S V +S + L S+S DK +KIW GK KT+ GH + ++ S
Sbjct: 82 TISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS 141
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
L+VSGS D++++IW++ +GKCLKTL HS+ V +FN +LIVS S+D RIWD
Sbjct: 142 NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA 201
Query: 142 TGKCLKTL-PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 200
+G+CLKTL + PVS V F+ +G I++++ D ++WD + G+CLKT N
Sbjct: 202 SGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYC 261
Query: 201 -FVKFS-PNGKYILAATLDNTLKLWD 224
F FS GK+I++ + DN + +W+
Sbjct: 262 IFANFSVTGGKWIVSGSEDNLVYIWN 287
Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 74/183 (40%), Positives = 110/183 (60%)
Query: 43 ASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGK 102
+S++ K + Y KF T++GH +S V +S + L S S DK +KIW GK
Sbjct: 21 SSATQSKPTPVKPNYALKF--TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK 78
Query: 103 CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFN 162
KT+ GH + ++ SNL+VS S D++++IWDV +GKCLKTL HS+ V +FN
Sbjct: 79 FEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFN 138
Query: 163 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 222
+LIVS S+D RIWD +G+CLKTL + PVS V F+ +G I++++ D ++
Sbjct: 139 PQSNLIVSGSFDESVRIWDVKTGKCLKTL-PAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 197
Query: 223 WDS 225
WD+
Sbjct: 198 WDT 200
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 71/210 (33%), Positives = 106/210 (50%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GH+ V F+P + S S D+ ++IW GK KT+ H +S V ++ D
Sbjct: 124 TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDG 183
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNY-VFCCNFNPQSNLIVSGSFDESVRIWDV 140
L+VS S D +IW+ +SG+CLKTL N V F+P I++ + D ++++WD
Sbjct: 184 SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDY 243
Query: 141 RTGKCLKTLPAHSDPVSAVHFN---RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 197
GKCLKT H + + N G IVS S D L IW+ + + ++ L +
Sbjct: 244 SKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDV 303
Query: 198 PVSFVKFSPNGKYILAATLDN--TLKLWDS 225
+S P I +A L+N T+KLW S
Sbjct: 304 VIS-TACHPTENIIASAALENDKTIKLWKS 332
Score = 216 (81.1 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 44/121 (36%), Positives = 68/121 (56%)
Query: 106 TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDG 165
TL GH+ V F+P + S S D+ ++IW GK KT+ H +S V ++ D
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 99
Query: 166 SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225
+L+VS+S D +IWD +SG+CLKTL N V F+P I++ + D ++++WD
Sbjct: 100 NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNY-VFCCNFNPQSNLIVSGSFDESVRIWDV 158
Query: 226 K 226
K
Sbjct: 159 K 159
Score = 181 (68.8 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 39/125 (31%), Positives = 71/125 (56%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
LK + VS VKFSPNG+++ +++ D +K+W GK KT +GHK + +
Sbjct: 206 LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFAN 265
Query: 79 ---SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF--DE 133
+ + +VSGS+D + IW L + + ++ L+GH++ V +P N+I S + D+
Sbjct: 266 FSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDK 325
Query: 134 SVRIW 138
++++W
Sbjct: 326 TIKLW 330
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 1084 (386.6 bits), Expect = 1.0e-109, P = 1.0e-109
Identities = 202/208 (97%), Positives = 205/208 (98%)
Query: 17 YVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA 76
Y LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA
Sbjct: 35 YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA 94
Query: 77 WSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 136
WSSDS LLVS SDDKTLKIW++SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR
Sbjct: 95 WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 154
Query: 137 IWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 196
IWDV+TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN
Sbjct: 155 IWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 214
Query: 197 PPVSFVKFSPNGKYILAATLDNTLKLWD 224
PPVSFVKFSPNGKYILAATLDNTLKLWD
Sbjct: 215 PPVSFVKFSPNGKYILAATLDNTLKLWD 242
Score = 403 (146.9 bits), Expect = 1.5e-37, P = 1.5e-37
Identities = 82/206 (39%), Positives = 125/206 (60%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
T++GH +S V +S + L S+S DK +KIW GK KT+ GH + ++ S
Sbjct: 82 TISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS 141
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
L+VSGS D++++IW++ +GKCLKTL HS+ V +FN +LIVS S+D RIWD
Sbjct: 142 NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA 201
Query: 142 TGKCLKTL-PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 200
+G+CLKTL + PVS V F+ +G I++++ D ++WD + G+CLKT N
Sbjct: 202 SGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYC 261
Query: 201 -FVKFS-PNGKYILAATLDNTLKLWD 224
F FS GK+I++ + DN + +W+
Sbjct: 262 IFANFSVTGGKWIVSGSEDNLVYIWN 287
Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 74/183 (40%), Positives = 110/183 (60%)
Query: 43 ASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGK 102
+S++ K + Y KF T++GH +S V +S + L S S DK +KIW GK
Sbjct: 21 SSATQSKPTPVKPNYALKF--TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK 78
Query: 103 CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFN 162
KT+ GH + ++ SNL+VS S D++++IWDV +GKCLKTL HS+ V +FN
Sbjct: 79 FEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFN 138
Query: 163 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 222
+LIVS S+D RIWD +G+CLKTL + PVS V F+ +G I++++ D ++
Sbjct: 139 PQSNLIVSGSFDESVRIWDVKTGKCLKTL-PAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 197
Query: 223 WDS 225
WD+
Sbjct: 198 WDT 200
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 71/210 (33%), Positives = 106/210 (50%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GH+ V F+P + S S D+ ++IW GK KT+ H +S V ++ D
Sbjct: 124 TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDG 183
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNY-VFCCNFNPQSNLIVSGSFDESVRIWDV 140
L+VS S D +IW+ +SG+CLKTL N V F+P I++ + D ++++WD
Sbjct: 184 SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDY 243
Query: 141 RTGKCLKTLPAHSDPVSAVHFN---RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 197
GKCLKT H + + N G IVS S D L IW+ + + ++ L +
Sbjct: 244 SKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDV 303
Query: 198 PVSFVKFSPNGKYILAATLDN--TLKLWDS 225
+S P I +A L+N T+KLW S
Sbjct: 304 VIS-TACHPTENIIASAALENDKTIKLWKS 332
Score = 216 (81.1 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 44/121 (36%), Positives = 68/121 (56%)
Query: 106 TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDG 165
TL GH+ V F+P + S S D+ ++IW GK KT+ H +S V ++ D
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 99
Query: 166 SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225
+L+VS+S D +IWD +SG+CLKTL N V F+P I++ + D ++++WD
Sbjct: 100 NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNY-VFCCNFNPQSNLIVSGSFDESVRIWDV 158
Query: 226 K 226
K
Sbjct: 159 K 159
Score = 181 (68.8 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 39/125 (31%), Positives = 71/125 (56%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
LK + VS VKFSPNG+++ +++ D +K+W GK KT +GHK + +
Sbjct: 206 LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFAN 265
Query: 79 ---SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF--DE 133
+ + +VSGS+D + IW L + + ++ L+GH++ V +P N+I S + D+
Sbjct: 266 FSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDK 325
Query: 134 SVRIW 138
++++W
Sbjct: 326 TIKLW 330
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 1084 (386.6 bits), Expect = 1.0e-109, P = 1.0e-109
Identities = 202/208 (97%), Positives = 205/208 (98%)
Query: 17 YVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA 76
Y LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA
Sbjct: 9 YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA 68
Query: 77 WSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 136
WSSDS LLVS SDDKTLKIW++SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR
Sbjct: 69 WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 128
Query: 137 IWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 196
IWDV+TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN
Sbjct: 129 IWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 188
Query: 197 PPVSFVKFSPNGKYILAATLDNTLKLWD 224
PPVSFVKFSPNGKYILAATLDNTLKLWD
Sbjct: 189 PPVSFVKFSPNGKYILAATLDNTLKLWD 216
Score = 403 (146.9 bits), Expect = 1.5e-37, P = 1.5e-37
Identities = 82/206 (39%), Positives = 125/206 (60%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
T++GH +S V +S + L S+S DK +KIW GK KT+ GH + ++ S
Sbjct: 56 TISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS 115
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
L+VSGS D++++IW++ +GKCLKTL HS+ V +FN +LIVS S+D RIWD
Sbjct: 116 NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA 175
Query: 142 TGKCLKTL-PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 200
+G+CLKTL + PVS V F+ +G I++++ D ++WD + G+CLKT N
Sbjct: 176 SGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYC 235
Query: 201 -FVKFS-PNGKYILAATLDNTLKLWD 224
F FS GK+I++ + DN + +W+
Sbjct: 236 IFANFSVTGGKWIVSGSEDNLVYIWN 261
Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
Identities = 72/169 (42%), Positives = 104/169 (61%)
Query: 57 YDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFC 116
Y KF T++GH +S V +S + L S S DK +KIW GK KT+ GH +
Sbjct: 9 YALKF--TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISD 66
Query: 117 CNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGL 176
++ SNL+VS S D++++IWDV +GKCLKTL HS+ V +FN +LIVS S+D
Sbjct: 67 VAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 126
Query: 177 CRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225
RIWD +G+CLKTL + PVS V F+ +G I++++ D ++WD+
Sbjct: 127 VRIWDVKTGKCLKTL-PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 174
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 71/210 (33%), Positives = 106/210 (50%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GH+ V F+P + S S D+ ++IW GK KT+ H +S V ++ D
Sbjct: 98 TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDG 157
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNY-VFCCNFNPQSNLIVSGSFDESVRIWDV 140
L+VS S D +IW+ +SG+CLKTL N V F+P I++ + D ++++WD
Sbjct: 158 SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDY 217
Query: 141 RTGKCLKTLPAHSDPVSAVHFN---RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 197
GKCLKT H + + N G IVS S D L IW+ + + ++ L +
Sbjct: 218 SKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDV 277
Query: 198 PVSFVKFSPNGKYILAATLDN--TLKLWDS 225
+S P I +A L+N T+KLW S
Sbjct: 278 VIS-TACHPTENIIASAALENDKTIKLWKS 306
Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
Identities = 44/121 (36%), Positives = 68/121 (56%)
Query: 106 TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDG 165
TL GH+ V F+P + S S D+ ++IW GK KT+ H +S V ++ D
Sbjct: 14 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 73
Query: 166 SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225
+L+VS+S D +IWD +SG+CLKTL N V F+P I++ + D ++++WD
Sbjct: 74 NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNY-VFCCNFNPQSNLIVSGSFDESVRIWDV 132
Query: 226 K 226
K
Sbjct: 133 K 133
Score = 181 (68.8 bits), Expect = 9.1e-14, P = 9.1e-14
Identities = 39/125 (31%), Positives = 71/125 (56%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
LK + VS VKFSPNG+++ +++ D +K+W GK KT +GHK + +
Sbjct: 180 LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFAN 239
Query: 79 ---SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF--DE 133
+ + +VSGS+D + IW L + + ++ L+GH++ V +P N+I S + D+
Sbjct: 240 FSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDK 299
Query: 134 SVRIW 138
++++W
Sbjct: 300 TIKLW 304
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 1084 (386.6 bits), Expect = 1.0e-109, P = 1.0e-109
Identities = 202/208 (97%), Positives = 205/208 (98%)
Query: 17 YVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA 76
Y LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA
Sbjct: 35 YTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA 94
Query: 77 WSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 136
WSSDS LLVS SDDKTLKIW++SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR
Sbjct: 95 WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 154
Query: 137 IWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 196
IWDV+TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN
Sbjct: 155 IWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 214
Query: 197 PPVSFVKFSPNGKYILAATLDNTLKLWD 224
PPVSFVKFSPNGKYILAATLDNTLKLWD
Sbjct: 215 PPVSFVKFSPNGKYILAATLDNTLKLWD 242
Score = 401 (146.2 bits), Expect = 2.4e-37, P = 2.4e-37
Identities = 82/206 (39%), Positives = 125/206 (60%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
T++GH +S V +S + L S+S DK +KIW GK KT+ GH + ++ S
Sbjct: 82 TISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS 141
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
L+VSGS D++++IW++ +GKCLKTL HS+ V +FN +LIVS S+D RIWD
Sbjct: 142 NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA 201
Query: 142 TGKCLKTL-PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 200
+G+CLKTL + PVS V F+ +G I++++ D ++WD + G+CLKT N
Sbjct: 202 SGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTCHKNEKYC 261
Query: 201 -FVKFS-PNGKYILAATLDNTLKLWD 224
F FS GK+I++ + DN + +W+
Sbjct: 262 IFANFSVTGGKWIVSGSEDNLVYIWN 287
Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 74/183 (40%), Positives = 110/183 (60%)
Query: 43 ASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGK 102
+S++ K + Y KF T++GH +S V +S + L S S DK +KIW GK
Sbjct: 21 SSNNQSKPAPVKPNYTLKF--TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK 78
Query: 103 CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFN 162
KT+ GH + ++ SNL+VS S D++++IWDV +GKCLKTL HS+ V +FN
Sbjct: 79 FEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFN 138
Query: 163 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 222
+LIVS S+D RIWD +G+CLKTL + PVS V F+ +G I++++ D ++
Sbjct: 139 PQSNLIVSGSFDESVRIWDVKTGKCLKTL-PAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 197
Query: 223 WDS 225
WD+
Sbjct: 198 WDT 200
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 71/210 (33%), Positives = 106/210 (50%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GH+ V F+P + S S D+ ++IW GK KT+ H +S V ++ D
Sbjct: 124 TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDG 183
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNY-VFCCNFNPQSNLIVSGSFDESVRIWDV 140
L+VS S D +IW+ +SG+CLKTL N V F+P I++ + D ++++WD
Sbjct: 184 SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDY 243
Query: 141 RTGKCLKTLPAHSDPVSAVHFN---RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 197
GKCLKT H + + N G IVS S D L IW+ + + ++ L +
Sbjct: 244 SKGKCLKTYTCHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEVVQKLQGHTDV 303
Query: 198 PVSFVKFSPNGKYILAATLDN--TLKLWDS 225
+S P I +A L+N T+KLW S
Sbjct: 304 VIS-TACHPTENIIASAALENDKTIKLWKS 332
Score = 216 (81.1 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 44/121 (36%), Positives = 68/121 (56%)
Query: 106 TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDG 165
TL GH+ V F+P + S S D+ ++IW GK KT+ H +S V ++ D
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 99
Query: 166 SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225
+L+VS+S D +IWD +SG+CLKTL N V F+P I++ + D ++++WD
Sbjct: 100 NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNY-VFCCNFNPQSNLIVSGSFDESVRIWDV 158
Query: 226 K 226
K
Sbjct: 159 K 159
Score = 172 (65.6 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 38/125 (30%), Positives = 70/125 (56%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
LK + VS VKFSPNG+++ +++ D +K+W GK KT + HK + +
Sbjct: 206 LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTCHKNEKYCIFAN 265
Query: 79 ---SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF--DE 133
+ + +VSGS+D + IW L + + ++ L+GH++ V +P N+I S + D+
Sbjct: 266 FSVTGGKWIVSGSEDNLVYIWNLQTKEVVQKLQGHTDVVISTACHPTENIIASAALENDK 325
Query: 134 SVRIW 138
++++W
Sbjct: 326 TIKLW 330
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 909 (325.0 bits), Expect = 3.5e-91, P = 3.5e-91
Identities = 166/208 (79%), Positives = 186/208 (89%)
Query: 17 YVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA 76
Y L+ TLAGH+ A+SSVKFSPNGEWLASS+AD LI IWGAYDG +KT+ GH L ISDVA
Sbjct: 29 YALRLTLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVA 88
Query: 77 WSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 136
WSSDS LVS SDDKTLK+W++ SGKCLKTLKGHS++VFCC+FNP SNLIVSGSFDESV+
Sbjct: 89 WSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVK 148
Query: 137 IWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 196
IW+V+TGKCLKTL AHSDP+SAV+FN +GSLIVS SYDGLCRIWD ASGQCL+TL D+ N
Sbjct: 149 IWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGN 208
Query: 197 PPVSFVKFSPNGKYILAATLDNTLKLWD 224
PPVSFVKFSPNGKYIL ATLDNTLKLWD
Sbjct: 209 PPVSFVKFSPNGKYILTATLDNTLKLWD 236
Score = 412 (150.1 bits), Expect = 1.6e-38, P = 1.6e-38
Identities = 84/208 (40%), Positives = 127/208 (61%)
Query: 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 79
K TL GH+ +S V +S + L S+S DK +K+W GK KT+ GH + ++
Sbjct: 74 KKTLYGHSLEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNP 133
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
S L+VSGS D+++KIWE+ +GKCLKTL HS+ + NFN +LIVSGS+D RIWD
Sbjct: 134 PSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWD 193
Query: 140 VRTGKCLKTLPAHSDP-VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 198
+G+CL+TL +P VS V F+ +G I++++ D ++WD + G+CLKT N
Sbjct: 194 AASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEK 253
Query: 199 VS-FVKFSPNG-KYILAATLDNTLKLWD 224
F FS G K++++ + DN + +W+
Sbjct: 254 YCLFASFSVTGRKWVVSGSEDNMVYIWN 281
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 65/162 (40%), Positives = 98/162 (60%)
Query: 64 TISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQS 123
T++GH IS V +S + L S + D + IW G C KTL GHS + ++ S
Sbjct: 34 TLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSDS 93
Query: 124 NLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA 183
+ +VS S D+++++WD+R+GKCLKTL HSD V FN +LIVS S+D +IW+
Sbjct: 94 SRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVK 153
Query: 184 SGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225
+G+CLKTL + P+S V F+ NG I++ + D ++WD+
Sbjct: 154 TGKCLKTL-SAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDA 194
Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 69/210 (32%), Positives = 109/210 (51%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GH+ V F+P + S S D+ +KIW GK KT+S H IS V ++ +
Sbjct: 118 TLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNG 177
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNY-VFCCNFNPQSNLIVSGSFDESVRIWDV 140
L+VSGS D +IW+ +SG+CL+TL N V F+P I++ + D ++++WD
Sbjct: 178 SLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDY 237
Query: 141 RTGKCLKTLPAHSDPVSAVH--FNRDG-SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 197
G+CLKT H + + F+ G +VS S D + IW+ + + ++ L +
Sbjct: 238 SRGRCLKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIWNLQTKEIVQRLQGHTDV 297
Query: 198 PVSFVKFSPNGKYILAATLDN--TLKLWDS 225
+S P I +A L+N T+K+W S
Sbjct: 298 VIS-AACHPTKNIIASAALENDKTIKVWSS 326
Score = 202 (76.2 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 43/121 (35%), Positives = 65/121 (53%)
Query: 106 TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDG 165
TL GHS + F+P + S + D + IW G C KTL HS +S V ++ D
Sbjct: 34 TLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSDS 93
Query: 166 SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225
S +VS+S D ++WD SG+CLKTL + V F+P I++ + D ++K+W+
Sbjct: 94 SRLVSASDDKTLKVWDMRSGKCLKTL-KGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEV 152
Query: 226 K 226
K
Sbjct: 153 K 153
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 842 (301.5 bits), Expect = 4.4e-84, P = 4.4e-84
Identities = 152/208 (73%), Positives = 181/208 (87%)
Query: 17 YVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA 76
Y L TL GHTK++SS KFSP G++L +SSADK +KIW E+T++GHKLG++D+A
Sbjct: 77 YKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIA 136
Query: 77 WSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 136
WSSDSR +VS SDDKTLKI+E+ + + KTLKGH+NYVFCCNFNPQS+L+VSGSFDESVR
Sbjct: 137 WSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVR 196
Query: 137 IWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 196
IWDV+TG C+KTLPAHSDPVSAV FNRDGSLI S SYDGL RIWDTA+GQC+KTL+DD+N
Sbjct: 197 IWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDEN 256
Query: 197 PPVSFVKFSPNGKYILAATLDNTLKLWD 224
PPV+FVKFSPNGKYILA+ LD+TLKLWD
Sbjct: 257 PPVAFVKFSPNGKYILASNLDSTLKLWD 284
Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 73/206 (35%), Positives = 120/206 (58%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GH V+ + +S + + S+S DK +KI+ + KT+ GH + ++ S
Sbjct: 124 TLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQS 183
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
L+VSGS D++++IW++ +G C+KTL HS+ V +FN +LI SGS+D VRIWD
Sbjct: 184 SLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTA 243
Query: 142 TGKCLKTL-PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 200
G+C+KTL + PV+ V F+ +G I++S+ D ++WD + G+ LK +N
Sbjct: 244 NGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYC 303
Query: 201 -FVKFS-PNGKYILAATLDNTLKLWD 224
F FS GK+I++ + D + +W+
Sbjct: 304 IFANFSVTGGKWIISGSEDCKIYIWN 329
Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 61/171 (35%), Positives = 97/171 (56%)
Query: 55 GAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYV 114
G+ + K T+ GH IS +S + L + S DKT+KIW + C +TL GH V
Sbjct: 73 GSANYKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGV 132
Query: 115 FCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 174
++ S +VS S D++++I+++ T + KTL H++ V +FN SL+VS S+D
Sbjct: 133 NDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFD 192
Query: 175 GLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225
RIWD +G C+KTL + PVS V F+ +G I + + D +++WD+
Sbjct: 193 ESVRIWDVKTGMCIKTL-PAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDT 242
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 63/212 (29%), Positives = 101/212 (47%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GH V F+P + S S D+ ++IW G KT+ H +S V+++ D
Sbjct: 166 TLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDG 225
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNY-VFCCNFNPQSNLIVSGSFDESVRIWDV 140
L+ SGS D ++IW+ ++G+C+KTL N V F+P I++ + D ++++WD
Sbjct: 226 SLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDF 285
Query: 141 RTGKCLKTLPAHSDPVSAVHFN---RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 197
GK LK H + + N G I+S S D IW+ + + ++ L +
Sbjct: 286 SKGKTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCL-EGHTQ 344
Query: 198 PVSFVKFSPNGKYILAATL--DNTLKLWDSKV 227
PV P I + L DN + +W S V
Sbjct: 345 PVLASDCHPVQNIIASGALEPDNKIHIWRSDV 376
Score = 163 (62.4 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 34/125 (27%), Positives = 68/125 (54%)
Query: 102 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHF 161
K + TL+GH+ + F+P + + S D++V+IW++ C +TL H V+ + +
Sbjct: 78 KLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAW 137
Query: 162 NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLK 221
+ D +VS+S D +I++ + + KTL +N V F+P +++ + D +++
Sbjct: 138 SSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNY-VFCCNFNPQSSLVVSGSFDESVR 196
Query: 222 LWDSK 226
+WD K
Sbjct: 197 IWDVK 201
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 842 (301.5 bits), Expect = 4.4e-84, P = 4.4e-84
Identities = 152/208 (73%), Positives = 181/208 (87%)
Query: 17 YVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA 76
Y L TL GHTK++SS KFSP G++L +SSADK +KIW E+T++GHKLG++D+A
Sbjct: 77 YKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIA 136
Query: 77 WSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 136
WSSDSR +VS SDDKTLKI+E+ + + KTLKGH+NYVFCCNFNPQS+L+VSGSFDESVR
Sbjct: 137 WSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVR 196
Query: 137 IWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 196
IWDV+TG C+KTLPAHSDPVSAV FNRDGSLI S SYDGL RIWDTA+GQC+KTL+DD+N
Sbjct: 197 IWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDEN 256
Query: 197 PPVSFVKFSPNGKYILAATLDNTLKLWD 224
PPV+FVKFSPNGKYILA+ LD+TLKLWD
Sbjct: 257 PPVAFVKFSPNGKYILASNLDSTLKLWD 284
Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 73/206 (35%), Positives = 120/206 (58%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GH V+ + +S + + S+S DK +KI+ + KT+ GH + ++ S
Sbjct: 124 TLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQS 183
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
L+VSGS D++++IW++ +G C+KTL HS+ V +FN +LI SGS+D VRIWD
Sbjct: 184 SLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTA 243
Query: 142 TGKCLKTL-PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 200
G+C+KTL + PV+ V F+ +G I++S+ D ++WD + G+ LK +N
Sbjct: 244 NGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYC 303
Query: 201 -FVKFS-PNGKYILAATLDNTLKLWD 224
F FS GK+I++ + D + +W+
Sbjct: 304 IFANFSVTGGKWIISGSEDCKIYIWN 329
Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 61/171 (35%), Positives = 97/171 (56%)
Query: 55 GAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYV 114
G+ + K T+ GH IS +S + L + S DKT+KIW + C +TL GH V
Sbjct: 73 GSANYKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGV 132
Query: 115 FCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 174
++ S +VS S D++++I+++ T + KTL H++ V +FN SL+VS S+D
Sbjct: 133 NDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFD 192
Query: 175 GLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225
RIWD +G C+KTL + PVS V F+ +G I + + D +++WD+
Sbjct: 193 ESVRIWDVKTGMCIKTL-PAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDT 242
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 63/212 (29%), Positives = 101/212 (47%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GH V F+P + S S D+ ++IW G KT+ H +S V+++ D
Sbjct: 166 TLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDG 225
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNY-VFCCNFNPQSNLIVSGSFDESVRIWDV 140
L+ SGS D ++IW+ ++G+C+KTL N V F+P I++ + D ++++WD
Sbjct: 226 SLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDF 285
Query: 141 RTGKCLKTLPAHSDPVSAVHFN---RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 197
GK LK H + + N G I+S S D IW+ + + ++ L +
Sbjct: 286 SKGKTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCL-EGHTQ 344
Query: 198 PVSFVKFSPNGKYILAATL--DNTLKLWDSKV 227
PV P I + L DN + +W S V
Sbjct: 345 PVLASDCHPVQNIIASGALEPDNKIHIWRSDV 376
Score = 163 (62.4 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 34/125 (27%), Positives = 68/125 (54%)
Query: 102 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHF 161
K + TL+GH+ + F+P + + S D++V+IW++ C +TL H V+ + +
Sbjct: 78 KLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAW 137
Query: 162 NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLK 221
+ D +VS+S D +I++ + + KTL +N V F+P +++ + D +++
Sbjct: 138 SSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNY-VFCCNFNPQSSLVVSGSFDESVR 196
Query: 222 LWDSK 226
+WD K
Sbjct: 197 IWDVK 201
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 839 (300.4 bits), Expect = 9.1e-84, P = 9.1e-84
Identities = 151/208 (72%), Positives = 182/208 (87%)
Query: 17 YVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA 76
Y L T+ GHTK++S+VKFSP G++L +SSADK +KIW D E+T++GHKLG++D A
Sbjct: 69 YKLISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFA 128
Query: 77 WSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 136
WS+DS+ +V+ SDDKTLKI+E+ + K KTLKGH+NYVFCCNFNPQS+L+VSGSFDESVR
Sbjct: 129 WSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVR 188
Query: 137 IWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 196
IWDVRTG C+KTLPAHSDPVSAV FNRDGSLI S SYDGL RIWDTA+GQC+KTL+DD+N
Sbjct: 189 IWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDEN 248
Query: 197 PPVSFVKFSPNGKYILAATLDNTLKLWD 224
PPV+FVKFSPNGKYIL++ LDNTLKLWD
Sbjct: 249 PPVAFVKFSPNGKYILSSNLDNTLKLWD 276
Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
Identities = 74/206 (35%), Positives = 119/206 (57%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GH V+ +S + + + ++S DK +KI+ K KT+ GH + ++ S
Sbjct: 116 TLTGHKLGVNDFAWSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQS 175
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
L+VSGS D++++IW++ +G C+KTL HS+ V +FN +LI SGS+D VRIWD
Sbjct: 176 SLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTA 235
Query: 142 TGKCLKTL-PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 200
G+C+KTL + PV+ V F+ +G I+SS+ D ++WD G+ LK +N
Sbjct: 236 NGQCVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGKGKTLKQYQGHENNKYC 295
Query: 201 -FVKFS-PNGKYILAATLDNTLKLWD 224
F FS GK+I++ + D + +W+
Sbjct: 296 IFANFSVTGGKWIISGSEDCKIYVWN 321
Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 65/166 (39%), Positives = 96/166 (57%)
Query: 60 KFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNF 119
K TI GH IS V +S + L + S DKT+KIW +S C +TL GH V +
Sbjct: 70 KLISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAW 129
Query: 120 NPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 179
+ S IV+ S D++++I++V T K KTL H++ V +FN SL+VS S+D RI
Sbjct: 130 SADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRI 189
Query: 180 WDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225
WD +G C+KTL + PVS V F+ +G I + + D +++WD+
Sbjct: 190 WDVRTGMCVKTL-PAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDT 234
Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 63/210 (30%), Positives = 103/210 (49%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GHT V F+P + S S D+ ++IW G KT+ H +S V+++ D
Sbjct: 158 TLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDG 217
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNY-VFCCNFNPQSNLIVSGSFDESVRIWDV 140
L+ SGS D ++IW+ ++G+C+KTL N V F+P I+S + D ++++WD
Sbjct: 218 SLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWDF 277
Query: 141 RTGKCLKTLPAHSDPVSAVHFN---RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 197
GK LK H + + N G I+S S D +W+ + + +++L +
Sbjct: 278 GKGKTLKQYQGHENNKYCIFANFSVTGGKWIISGSEDCKIYVWNLQTKEVVQSL-EGHTQ 336
Query: 198 PVSFVKFSPNGKYILAATL--DNTLKLWDS 225
V P I + L DNT+++W S
Sbjct: 337 AVIASDCHPMQNMIASGALEPDNTIRIWRS 366
Score = 231 (86.4 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 53/169 (31%), Positives = 92/169 (54%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT-ISGHKLGISDVAWSSD 80
TL H+ VS+V F+ +G + S S D L++IW +G+ KT + ++ V +S +
Sbjct: 200 TLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFSPN 259
Query: 81 SRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFC--CNFNPQSNL-IVSGSFDESVRI 137
+ ++S + D TLK+W+ GK LK +GH N +C NF+ I+SGS D + +
Sbjct: 260 GKYILSSNLDNTLKLWDFGKGKTLKQYQGHENNKYCIFANFSVTGGKWIISGSEDCKIYV 319
Query: 138 WDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY--DGLCRIWDTAS 184
W+++T + +++L H+ V A + ++I S + D RIW + S
Sbjct: 320 WNLQTKEVVQSLEGHTQAVIASDCHPMQNMIASGALEPDNTIRIWRSDS 368
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 829 (296.9 bits), Expect = 1.0e-82, P = 1.0e-82
Identities = 147/207 (71%), Positives = 176/207 (85%)
Query: 17 YVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA 76
Y+LK+TL GH K++SSVKFSP+G+WLAS+SADK IKIWGAYDGKFE+T+ GHK GISD+A
Sbjct: 36 YILKYTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIA 95
Query: 77 WSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 136
WS DS+L+ S SDDKT+KIW++ SGK +KTLKGH YVF +FNPQSNLIVSGSFDE+VR
Sbjct: 96 WSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVR 155
Query: 137 IWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 196
IWDV TG+C K + AHSDPV+ VHFNRDG+L+VS SYDG RIWDT +GQ L T+ +D
Sbjct: 156 IWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDG 215
Query: 197 PPVSFVKFSPNGKYILAATLDNTLKLW 223
VSFVKFSPNGK++LA TLDNTL+LW
Sbjct: 216 KEVSFVKFSPNGKFVLAGTLDNTLRLW 242
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 66/162 (40%), Positives = 99/162 (61%)
Query: 64 TISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQS 123
T+ GH IS V +S D + L S S DKT+KIW GK +TL+GH + ++ S
Sbjct: 41 TLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWSQDS 100
Query: 124 NLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA 183
LI S S D++++IWDV +GK +KTL H + V V FN +LIVS S+D RIWD
Sbjct: 101 KLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVN 160
Query: 184 SGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225
+G+C K +I + PV+ V F+ +G +++ + D T+++WD+
Sbjct: 161 TGECTK-MISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDT 201
Score = 202 (76.2 bits), Expect = 5.3e-16, P = 5.3e-16
Identities = 50/165 (30%), Positives = 88/165 (53%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK-LGISDVAWSSDS 81
++ H+ V+ V F+ +G + S S D ++IW G+ TIS +S V +S +
Sbjct: 168 ISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEVSFVKFSPNG 227
Query: 82 RLLVSGSDDKTLKIWELSSGK-CLKTLKGHSNYVFCC--NFNPQ-SNLIVSGSFDESVRI 137
+ +++G+ D TL++W ++ K CLKT GH N +C F+ IV+GS D + I
Sbjct: 228 KFVLAGTLDNTLRLWSYNNNKKCLKTYTGHKNEKYCIFSTFSVTCGKWIVTGSEDNLIYI 287
Query: 138 WDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY--DGLCRIW 180
++++T + ++TL H D V V + ++I S + D +IW
Sbjct: 288 YNLQTREIVQTLAGHEDVVLTVACHPTENIIASGALEKDRSVKIW 332
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 760 (272.6 bits), Expect = 2.1e-75, P = 2.1e-75
Identities = 143/213 (67%), Positives = 173/213 (81%)
Query: 17 YVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW--GAYDGKFEKTI---SGHKLG 71
YV TL H +AVSSVKFS +G LAS+SADK I+ + + + + +GH+ G
Sbjct: 14 YVHSQTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENG 73
Query: 72 ISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 131
ISDVA+SSD+R +VS SDDKTLK+W++ +G +KTL GH+NY FC NFNPQSN+IVSGSF
Sbjct: 74 ISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSF 133
Query: 132 DESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 191
DE+VRIWDV TGKCLK LPAHSDPV+AV FNRDGSLIVSSSYDGLCRIWD+ +G C+KTL
Sbjct: 134 DETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTL 193
Query: 192 IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
IDD+NPPVSFV+FSPNGK+IL TLDNTL+LW+
Sbjct: 194 IDDENPPVSFVRFSPNGKFILVGTLDNTLRLWN 226
Score = 371 (135.7 bits), Expect = 3.6e-34, P = 3.6e-34
Identities = 81/210 (38%), Positives = 121/210 (57%)
Query: 18 VLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW 77
V +FT GH +S V FS + ++ S+S DK +K+W G KT+ GH V +
Sbjct: 64 VQEFT--GHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNF 121
Query: 78 SSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 137
+ S ++VSGS D+T++IW++++GKCLK L HS+ V +FN +LIVS S+D RI
Sbjct: 122 NPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRI 181
Query: 138 WDVRTGKCLKTL-PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 196
WD TG C+KTL + PVS V F+ +G I+ + D R+W+ +S + LKT N
Sbjct: 182 WDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVN 241
Query: 197 PPVSFVK-FS-PNGKYILAATLDNTLKLWD 224
FS NGK I++ + DN + +W+
Sbjct: 242 AQYCISSAFSVTNGKRIVSGSEDNCVHMWE 271
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 60/168 (35%), Positives = 101/168 (60%)
Query: 63 KTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSS-----GKCLKTLKGHSNYVFCC 117
+T++ H +S V +SSD RLL S S DKT++ + +++ + ++ GH N +
Sbjct: 18 QTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDV 77
Query: 118 NFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 177
F+ + IVS S D+++++WDV TG +KTL H++ V+FN ++IVS S+D
Sbjct: 78 AFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETV 137
Query: 178 RIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225
RIWD +G+CLK L + PV+ V F+ +G I++++ D ++WDS
Sbjct: 138 RIWDVTTGKCLKVL-PAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDS 184
Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
Identities = 65/209 (31%), Positives = 103/209 (49%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GHT V F+P + S S D+ ++IW GK K + H ++ V ++ D
Sbjct: 108 TLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDG 167
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNY-VFCCNFNPQSNLIVSGSFDESVRIWDV 140
L+VS S D +IW+ +G C+KTL N V F+P I+ G+ D ++R+W++
Sbjct: 168 SLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNI 227
Query: 141 RTGKCLKTLPAHSDP---VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 197
+ K LKT H + +S+ +G IVS S D +W+ S + L+ L +
Sbjct: 228 SSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKL-EGHTE 286
Query: 198 PVSFVKFSPNGKYILAATLDNTLKLWDSK 226
V V P I + +LD T+++W K
Sbjct: 287 TVMNVACHPTENLIASGSLDKTVRIWTQK 315
Score = 221 (82.9 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 46/125 (36%), Positives = 73/125 (58%)
Query: 17 YVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH---KLGIS 73
+ +K + VS V+FSPNG+++ + D +++W KF KT +GH + IS
Sbjct: 188 HCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCIS 247
Query: 74 DVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 133
++ + +VSGS+D + +WEL+S K L+ L+GH+ V +P NLI SGS D+
Sbjct: 248 SAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDK 307
Query: 134 SVRIW 138
+VRIW
Sbjct: 308 TVRIW 312
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 686 (246.5 bits), Expect = 1.5e-67, P = 1.5e-67
Identities = 128/202 (63%), Positives = 156/202 (77%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GHT A+S VKFS +G LAS+S DK + +W A + GH GISD+AWSSDS
Sbjct: 38 TLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSDS 97
Query: 82 RLLVSGSDDKTLKIWELSSG-KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 140
S SDD TL+IW+ S +CLK L+GH+N+VFC NFNP SNLIVSGSFDE++RIW+V
Sbjct: 98 HYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEV 157
Query: 141 RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 200
+TGKC++ + AHS P+S+VHFNRDGSLIVS+S+DG C+IWD G CLKTLIDD +P VS
Sbjct: 158 KTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVS 217
Query: 201 FVKFSPNGKYILAATLDNTLKL 222
F KFSPNGK+IL ATLD+TLKL
Sbjct: 218 FAKFSPNGKFILVATLDSTLKL 239
Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
Identities = 76/213 (35%), Positives = 118/213 (55%)
Query: 17 YVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE--KTISGHKLGISD 74
Y L GH+ +S + +S + + S+S D ++IW A +E K + GH +
Sbjct: 75 YSLIHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARS-PYECLKVLRGHTNFVFC 133
Query: 75 VAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 134
V ++ S L+VSGS D+T++IWE+ +GKC++ +K HS + +FN +LIVS S D S
Sbjct: 134 VNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGS 193
Query: 135 VRIWDVRTGKCLKTLPAHSDP-VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 193
+IWD + G CLKTL P VS F+ +G I+ ++ D ++ + A+G+ LK
Sbjct: 194 CKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTG 253
Query: 194 DDNPPVSFVK-FS-PNGKYILAATLDNTLKLWD 224
N FS NGKYI++ + DN + LWD
Sbjct: 254 HTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWD 286
Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 62/165 (37%), Positives = 101/165 (61%)
Query: 63 KTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQ 122
KT+ GH IS V +S+D LL S S DKT+ +W ++ + +GHS+ + ++
Sbjct: 37 KTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSD 96
Query: 123 SNLIVSGSFDESVRIWDVRTG-KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181
S+ S S D ++RIWD R+ +CLK L H++ V V+FN +LIVS S+D RIW+
Sbjct: 97 SHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWE 156
Query: 182 TASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSK 226
+G+C++ +I + P+S V F+ +G I++A+ D + K+WD+K
Sbjct: 157 VKTGKCVR-MIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAK 200
Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 68/207 (32%), Positives = 102/207 (49%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
L GHT V V F+P + S S D+ I+IW GK + I H + IS V ++ D
Sbjct: 124 LRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGS 183
Query: 83 LLVSGSDDKTLKIWELSSGKCLKTL-KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
L+VS S D + KIW+ G CLKTL S V F+P I+ + D ++++ +
Sbjct: 184 LIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYA 243
Query: 142 TGKCLKTLPAHSDPVSAVH--FN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 198
TGK LK H++ V + F+ +G IVS S D +WD + L+ L +
Sbjct: 244 TGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAV 303
Query: 199 VSFVKFSPNGKYILAAT--LDNTLKLW 223
+S V P I ++ LD T+++W
Sbjct: 304 IS-VSCHPVQNEISSSGNHLDKTIRIW 329
Score = 184 (69.8 bits), Expect = 5.8e-14, P = 5.8e-14
Identities = 45/147 (30%), Positives = 73/147 (49%)
Query: 104 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNR 163
LKTL+GH+ + C F+ NL+ S S D+++ +W + HS +S + ++
Sbjct: 36 LKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSS 95
Query: 164 DGSLIVSSSYDGLCRIWDTASG-QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 222
D S+S D RIWD S +CLK L N V V F+P I++ + D T+++
Sbjct: 96 DSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNF-VFCVNFNPPSNLIVSGSFDETIRI 154
Query: 223 WD---SKVVTPAIICSTPLNLNYFYRN 246
W+ K V S P++ +F R+
Sbjct: 155 WEVKTGKCVRMIKAHSMPISSVHFNRD 181
Score = 181 (68.8 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 42/125 (33%), Positives = 75/125 (60%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH--KLGISDVA 76
LK + + AVS KFSPNG+++ ++ D +K+ GKF K +GH K+ A
Sbjct: 205 LKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSA 264
Query: 77 WS-SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGS-FDE 133
+S ++ + +VSGS+D + +W+L + L+ L+GH++ V + +P Q+ + SG+ D+
Sbjct: 265 FSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSCHPVQNEISSSGNHLDK 324
Query: 134 SVRIW 138
++RIW
Sbjct: 325 TIRIW 329
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 623 (224.4 bits), Expect = 7.1e-61, P = 7.1e-61
Identities = 112/209 (53%), Positives = 151/209 (72%)
Query: 17 YVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA 76
Y KF L GH + VS+V+FSP+ +AS AD +K+W A GK T GH GIS ++
Sbjct: 166 YRQKFLLRGHLRGVSAVRFSPDASMIASGGADGAVKVWAASTGKLIYTFEGHLAGISTIS 225
Query: 77 WSSDSRLLVSGSDDKTLKIWELSSGKCLKT-LKGHSNYVFCCNFNPQSNLIVSGSFDESV 135
WS D + SGSDDKT+++W + +GK T GH NYV+ F+P+ N++VSGS+DE+V
Sbjct: 226 WSPDGATIASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFSPKGNMLVSGSYDEAV 285
Query: 136 RIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD 195
+WDVR+ + +K+LPAHSDPVS + DG+LI S + DGL RIWDT++GQCL+TL+ +D
Sbjct: 286 FLWDVRSARVMKSLPAHSDPVSGIDVVWDGTLIASCATDGLVRIWDTSTGQCLRTLVHED 345
Query: 196 NPPVSFVKFSPNGKYILAATLDNTLKLWD 224
NPPVS VKFSPNGKY+LA TLD+ ++LWD
Sbjct: 346 NPPVSSVKFSPNGKYVLAWTLDDCVRLWD 374
Score = 266 (98.7 bits), Expect = 2.3e-22, P = 2.3e-22
Identities = 57/170 (33%), Positives = 95/170 (55%)
Query: 57 YDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFC 116
Y KF + GH G+S V +S D+ ++ SG D +K+W S+GK + T +GH +
Sbjct: 166 YRQKF--LLRGHLRGVSAVRFSPDASMIASGGADGAVKVWAASTGKLIYTFEGHLAGIST 223
Query: 117 CNFNPQSNLIVSGSFDESVRIWDVRTGKCLKT-LPAHSDPVSAVHFNRDGSLIVSSSYDG 175
+++P I SGS D+++R+W+V TGK T H + V A+ F+ G+++VS SYD
Sbjct: 224 ISWSPDGATIASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFSPKGNMLVSGSYDE 283
Query: 176 LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225
+WD S + +K+L + PVS + +G I + D +++WD+
Sbjct: 284 AVFLWDVRSARVMKSL-PAHSDPVSGIDVVWDGTLIASCATDGLVRIWDT 332
Score = 259 (96.2 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 64/216 (29%), Positives = 106/216 (49%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGIS--DVAWSSDSR 82
GH V ++ FSP G L S S D+ + +W + K++ H +S DV W D
Sbjct: 259 GHHNYVYAIAFSPKGNMLVSGSYDEAVFLWDVRSARVMKSLPAHSDPVSGIDVVW--DGT 316
Query: 83 LLVSGSDDKTLKIWELSSGKCLKTLKGHSNY-VFCCNFNPQSNLIVSGSFDESVRIWDVR 141
L+ S + D ++IW+ S+G+CL+TL N V F+P +++ + D+ VR+WD
Sbjct: 317 LIASCATDGLVRIWDTSTGQCLRTLVHEDNPPVSSVKFSPNGKYVLAWTLDDCVRLWDYV 376
Query: 142 TGKCLKTLPAHSDPVSAVH--FNRDGSLI----------VSSSYDGLCRIWDTASGQCLK 189
G+CLKT HS+ ++ F G I VS S DG WD + + L+
Sbjct: 377 EGRCLKTYQGHSNKKYSLSGAFGVYGQSIPGRTPGYAFAVSGSEDGAILCWDVVTKKVLQ 436
Query: 190 TLIDDDNPPVSFVKFSPN-GKYILAATLDNTLKLWD 224
+ D + S G+++++ LD T+++W+
Sbjct: 437 RIEAHDGVVLGVDTCSTGEGRFMVSCGLDGTVRVWE 472
>POMBASE|SPBC354.03 [details] [associations]
symbol:swd3 "WD repeat protein Swd3" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IC] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006342 "chromatin silencing" evidence=IC] [GO:0048188
"Set1C/COMPASS complex" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC354.03 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0000790 GO:GO:0006342
GO:GO:0048188 GO:GO:0051568 PIR:T40283 RefSeq:NP_595227.1
ProteinModelPortal:O43017 STRING:O43017 EnsemblFungi:SPBC354.03.1
GeneID:2540929 KEGG:spo:SPBC354.03 KO:K14963 OrthoDB:EOG49CTJ0
NextBio:20802044 Uniprot:O43017
Length = 380
Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
Identities = 104/221 (47%), Positives = 151/221 (68%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GH K+V+ V SPN W+A+SS+D IKIW A + E T+ GH GIS V W++ S
Sbjct: 49 TLFGHEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKWATGS 108
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
+ L S SDDKT++IW+ ++ LKGH+NYV +FNP L+VSGS+DE+VRIW+++
Sbjct: 109 KYLASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQ 168
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 201
G CL+ LPAHS+P+ +V + DG+L ++SYDG+ RIWD SGQCLKTL++ N P+S
Sbjct: 169 DGTCLRMLPAHSEPIISVSISADGTLCATASYDGMARIWDVLSGQCLKTLVEPINVPLSN 228
Query: 202 VKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTPLNLNY 242
++F+ N KY+L + L++ ++LWD + I + +N Y
Sbjct: 229 LQFTENRKYLLVSNLNSQIRLWDYRRNRVVRIFDSHVNTRY 269
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 58/164 (35%), Positives = 93/164 (56%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L+ TL GH + +S VK++ ++LAS+S DK I+IW + + GH +S + ++
Sbjct: 88 LECTLFGHYRGISQVKWATGSKYLASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFN 147
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
LLVSGS D+T++IW L G CL+ L HS + + + L + S+D RIW
Sbjct: 148 PLGTLLVSGSWDETVRIWNLQDGTCLRMLPAHSEPIISVSISADGTLCATASYDGMARIW 207
Query: 139 DVRTGKCLKTLPAHSD-PVSAVHFNRDGSLIVSSSYDGLCRIWD 181
DV +G+CLKTL + P+S + F + ++ S+ + R+WD
Sbjct: 208 DVLSGQCLKTLVEPINVPLSNLQFTENRKYLLVSNLNSQIRLWD 251
Score = 126 (49.4 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 45/209 (21%), Positives = 96/209 (45%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT-ISGHKLGISDVAWSSDS 81
L H++ + SV S +G A++S D + +IW G+ KT + + +S++ ++ +
Sbjct: 176 LPAHSEPIISVSISADGTLCATASYDGMARIWDVLSGQCLKTLVEPINVPLSNLQFTENR 235
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
+ L+ + + +++W+ + ++ H N + +++ S+ +
Sbjct: 236 KYLLVSNLNSQIRLWDYRRNRVVRIFDSHVNTRYSMSWDCYSSKNIP------------- 282
Query: 142 TGKCLKTLPAH--SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD----- 194
K + LP + S P A F D L++ S DG +I D ++ K +IDD
Sbjct: 283 --KNTEALPNNDSSYPDDAESFMHDAYLLIPSE-DGTIQITDPST----KIIIDDSIRHS 335
Query: 195 DNPPVSFVKFSPNGKYILAATLDNTLKLW 223
D+P S + + G +I+ + D +++W
Sbjct: 336 DDPETSLLNVTSLGPFIITSGTDPYVRVW 364
>UNIPROTKB|G4MKJ2 [details] [associations]
symbol:MGG_04473 "WD repeat containing protein 5"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0043581 "mycelium development" evidence=IEP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001231
GO:GO:0043581 KO:K14963 RefSeq:XP_003710987.1
EnsemblFungi:MGG_04473T0 GeneID:2677800 KEGG:mgr:MGG_04473
Uniprot:G4MKJ2
Length = 594
Score = 460 (167.0 bits), Expect = 1.2e-45, Sum P(2) = 1.2e-45
Identities = 92/204 (45%), Positives = 131/204 (64%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS-SD 80
TL GH VS + +SP+ LA+ S DK I++W + + G + G D +
Sbjct: 217 TLVGHMAGVSCLAWSPDSGTLATGSDDKAIRLWDRITAEPAHAV-GTQDGDDDAERGRTH 275
Query: 81 SRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 140
+SG+ + + + L GH NYV+C F+P+ N++ SGS+DE+V +WDV
Sbjct: 276 GGTRISGASGIGVGGGGGPARGTRRPLLGHHNYVYCLAFSPKGNILASGSYDEAVFLWDV 335
Query: 141 RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 200
R G+ +++LPAHSDPVS + F RDG+L+VS S DGL RIWDTA+GQCL+TL+ +DNP V+
Sbjct: 336 RAGRLMRSLPAHSDPVSGIDFCRDGTLVVSCSTDGLIRIWDTATGQCLRTLVHEDNPAVT 395
Query: 201 FVKFSPNGKYILAATLDNTLKLWD 224
V FSPNG+YILA LD+ ++LWD
Sbjct: 396 NVCFSPNGRYILAFNLDSCIRLWD 419
Score = 282 (104.3 bits), Expect = 2.2e-25, Sum P(2) = 2.2e-25
Identities = 60/209 (28%), Positives = 106/209 (50%)
Query: 17 YVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA 76
Y + L GH++ ++ V+ SPNG W+AS+SAD +IW A G T+ GH G+S +A
Sbjct: 170 YKRRLELRGHSQPIAQVRISPNGRWIASASADGTARIWDAETGAHIDTLVGHMAGVSCLA 229
Query: 77 WSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 136
WS DS L +GSDDK +++W+ + + + +SG+ V
Sbjct: 230 WSPDSGTLATGSDDKAIRLWDRITAEPAHAVGTQDGDDDAERGRTHGGTRISGASGIGVG 289
Query: 137 IWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 196
+ L H + V + F+ G+++ S SYD +WD +G+ +++L +
Sbjct: 290 GGGGPARGTRRPLLGHHNYVYCLAFSPKGNILASGSYDEAVFLWDVRAGRLMRSL-PAHS 348
Query: 197 PPVSFVKFSPNGKYILAATLDNTLKLWDS 225
PVS + F +G +++ + D +++WD+
Sbjct: 349 DPVSGIDFCRDGTLVVSCSTDGLIRIWDT 377
Score = 165 (63.1 bits), Expect = 9.2e-11, Sum P(2) = 9.2e-11
Identities = 55/200 (27%), Positives = 89/200 (44%)
Query: 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV 85
HT+ S SP A S + +++ Y + E + GH I+ V S + R +
Sbjct: 144 HTR-YRSTGSSPTPA--AESKPPERVQV--RYKRRLE--LRGHSQPIAQVRISPNGRWIA 196
Query: 86 SGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 145
S S D T +IW+ +G + TL GH V C ++P S + +GS D+++R+WD T +
Sbjct: 197 SASADGTARIWDAETGAHIDTLVGHMAGVSCLAWSPDSGTLATGSDDKAIRLWDRITAEP 256
Query: 146 LKTLPAHSDPVSAVHFNRDGSLIVS-SSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKF 204
+ A G +S +S G+ A G + L+ N V + F
Sbjct: 257 AHAVGTQDGDDDAERGRTHGGTRISGASGIGVGGGGGPARGT-RRPLLGHHNY-VYCLAF 314
Query: 205 SPNGKYILAATLDNTLKLWD 224
SP G + + + D + LWD
Sbjct: 315 SPKGNILASGSYDEAVFLWD 334
Score = 128 (50.1 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 28/83 (33%), Positives = 43/83 (51%)
Query: 149 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG 208
L HS P++ V + +G I S+S DG RIWD +G + TL+ VS + +SP+
Sbjct: 176 LRGHSQPIAQVRISPNGRWIASASADGTARIWDAETGAHIDTLVGH-MAGVSCLAWSPDS 234
Query: 209 KYILAATLDNTLKLWDSKVVTPA 231
+ + D ++LWD PA
Sbjct: 235 GTLATGSDDKAIRLWDRITAEPA 257
Score = 115 (45.5 bits), Expect = 0.00049, P = 0.00049
Identities = 44/184 (23%), Positives = 80/184 (43%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT-ISGHKLGISDVAWSSD 80
+L H+ VS + F +G + S S D LI+IW G+ +T + +++V +S +
Sbjct: 343 SLPAHSDPVSGIDFCRDGTLVVSCSTDGLIRIWDTATGQCLRTLVHEDNPAVTNVCFSPN 402
Query: 81 SRLLVSGSDDKTLKIWELSS--GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF----DES 134
R +++ + D +++W+ + K KT +GH N F + G F DE
Sbjct: 403 GRYILAFNLDSCIRLWDYIAHPSKVKKTYQGHVNTGFS----------IGGCFGVVQDEE 452
Query: 135 VRIWDVR-TGKCLKTLPAHSD--PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 191
I D + G+ D P + + + S+S DG +WD S + ++ +
Sbjct: 453 EEIEDEQQNGEDGDEDEDEQDRHPRRKQRQPKQQAFVASASEDGHIVLWDVKSKEVVQKI 512
Query: 192 IDDD 195
D
Sbjct: 513 AAHD 516
Score = 36 (17.7 bits), Expect = 1.2e-45, Sum P(2) = 1.2e-45
Identities = 6/17 (35%), Positives = 11/17 (64%)
Query: 210 YILAATLDNTLKLWDSK 226
++ +A+ D + LWD K
Sbjct: 488 FVASASEDGHIVLWDVK 504
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 456 (165.6 bits), Expect = 7.9e-42, P = 7.9e-42
Identities = 87/204 (42%), Positives = 133/204 (65%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GH+++V SV FSP+G+ LASSS+D IK+W + G+ ++T GH L I VA+S D
Sbjct: 955 TLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDG 1014
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
+ LVSGSDD T+K+W+L++ + ++L+ HS V F+P + S S D ++++WD
Sbjct: 1015 KHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSA 1074
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 201
TG+ +TL HS V +V F+ DG L+ S+SYDG ++W+ +G+ +TL + V
Sbjct: 1075 TGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDW-VDS 1133
Query: 202 VKFSPNGKYILAATLDNTLKLWDS 225
V FSP+GK + + D+T+KLWDS
Sbjct: 1134 VAFSPDGKQLASGYYDSTIKLWDS 1157
Score = 431 (156.8 bits), Expect = 3.7e-39, P = 3.7e-39
Identities = 80/206 (38%), Positives = 131/206 (63%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L+ +L H+++V +V FSP+ + LASSS D IK+W + G+ ++T+ GH G+ V +S
Sbjct: 1036 LQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFS 1095
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
D +LL S S D T+K+W +G+ +TL G S++V F+P + SG +D ++++W
Sbjct: 1096 PDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLW 1155
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 198
D TG+ L+TL HSD + +V F+ DG L+ S SYD ++WD A+G+ L+ + + +
Sbjct: 1156 DSATGELLQTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLWDPATGELLQ-IFEGHSKW 1214
Query: 199 VSFVKFSPNGKYILAATLDNTLKLWD 224
V V FSP+GK + +++ T+KLWD
Sbjct: 1215 VESVAFSPDGKLLASSSYGETIKLWD 1240
Score = 425 (154.7 bits), Expect = 1.6e-38, P = 1.6e-38
Identities = 83/206 (40%), Positives = 131/206 (63%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L+ TL GH++ V SV FSP+G+ LAS+S D IK+W G+ ++T++G + VA+S
Sbjct: 1078 LQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFS 1137
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
D + L SG D T+K+W+ ++G+ L+TL+GHS+ + F+P L+ SGS+D++ ++W
Sbjct: 1138 PDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLW 1197
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 198
D TG+ L+ HS V +V F+ DG L+ SSSY ++WD +G+ L+TL D D
Sbjct: 1198 DPATGELLQIFEGHSKWVESVAFSPDGKLLASSSYGETIKLWDPVTGELLQTLNDPDESA 1257
Query: 199 VSFVKFSPNGKYILAATLDNTLKLWD 224
S V FSP+G + + + +T K+WD
Sbjct: 1258 GS-VAFSPDGNRLASVDIFDT-KIWD 1281
Score = 403 (146.9 bits), Expect = 3.6e-36, P = 3.6e-36
Identities = 79/207 (38%), Positives = 129/207 (62%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L+ TL H+++V SV FSP+G+ LASSS D IK+W G+ ++++ G + VA+S
Sbjct: 868 LQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFS 927
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
D + L SGS+ T+K+W ++G+ L+TL+GHS V F+P + S S D ++++W
Sbjct: 928 PDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLW 987
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 198
+ TG+ +T H + AV F+ DG +VS S D ++WD A+ + L+ ++D +
Sbjct: 988 NSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSE-LQQSLEDHSRS 1046
Query: 199 VSFVKFSPNGKYILAATLDNTLKLWDS 225
V V FSP+ K + +++LD+T+KLWDS
Sbjct: 1047 VHAVAFSPDDKQLASSSLDSTIKLWDS 1073
Score = 396 (144.5 bits), Expect = 2.0e-35, P = 2.0e-35
Identities = 77/203 (37%), Positives = 125/203 (61%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
T GH ++ SV F+P+G+ LAS+S D IKIW G+ ++T+ H + VA+S D
Sbjct: 829 TFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDG 888
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
+LL S S D T+K+W ++G+ ++L+G S +V F+P + SGS +V++W+
Sbjct: 889 KLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPA 948
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 201
TG+ L+TL HS V +V F+ DG + SSS D ++W++ +G+ +T D +
Sbjct: 949 TGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLW-IRA 1007
Query: 202 VKFSPNGKYILAATLDNTLKLWD 224
V FSP+GK++++ + DNT+KLWD
Sbjct: 1008 VAFSPDGKHLVSGSDDNTIKLWD 1030
Score = 396 (144.5 bits), Expect = 2.0e-35, P = 2.0e-35
Identities = 77/203 (37%), Positives = 124/203 (61%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL H V SV FSP+G+ L S S D +KIW G+ +T+ GH + +A+S D
Sbjct: 745 TLENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPDG 804
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
+LL SGS D T+ +W+ ++G+ L+T +GH + ++ F P + S S D +++IWD+
Sbjct: 805 KLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDLA 864
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 201
TG+ +TL +HS V +V F+ DG L+ SSS D ++W+ A+G+ L+ ++ + V
Sbjct: 865 TGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGE-LQQSLEGRSGWVKS 923
Query: 202 VKFSPNGKYILAATLDNTLKLWD 224
V FSP+GK + + + NT+KLW+
Sbjct: 924 VAFSPDGKKLASGSEKNTVKLWN 946
Score = 394 (143.8 bits), Expect = 3.3e-35, P = 3.3e-35
Identities = 75/206 (36%), Positives = 123/206 (59%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L+ T GH + +V FSP+G+ L S S D IK+W + ++++ H + VA+S
Sbjct: 994 LQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFS 1053
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
D + L S S D T+K+W+ ++G+ +TL+GHS V F+P L+ S S+D ++++W
Sbjct: 1054 PDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLW 1113
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 198
+ TG+ +TL SD V +V F+ DG + S YD ++WD+A+G+ L+TL + +
Sbjct: 1114 NPLTGELQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTL-EGHSDR 1172
Query: 199 VSFVKFSPNGKYILAATLDNTLKLWD 224
+ V FSP+GK + + + D T KLWD
Sbjct: 1173 IQSVVFSPDGKLLASGSYDQTAKLWD 1198
Score = 392 (143.0 bits), Expect = 5.3e-35, P = 5.3e-35
Identities = 78/204 (38%), Positives = 123/204 (60%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GH+ V S+ FSP+G+ LAS S D I +W + G+ +T GH I VA++ D
Sbjct: 787 TLDGHSGTVESLAFSPDGKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDG 846
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
+ L S SDD T+KIW+L++G+ +TL HS V F+P L+ S S D ++++W+
Sbjct: 847 KELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPA 906
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 201
TG+ ++L S V +V F+ DG + S S ++W+ A+G+ L+TL + + V
Sbjct: 907 TGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTL-EGHSQSVRS 965
Query: 202 VKFSPNGKYILAATLDNTLKLWDS 225
V FSP+GK + +++ D T+KLW+S
Sbjct: 966 VAFSPDGKQLASSSSDTTIKLWNS 989
Score = 388 (141.6 bits), Expect = 1.4e-34, P = 1.4e-34
Identities = 76/206 (36%), Positives = 123/206 (59%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L+ +L G + V SV FSP+G+ LAS S +K+W G+ +T+ GH + VA+S
Sbjct: 910 LQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFS 969
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
D + L S S D T+K+W ++G+ +T KGH ++ F+P +VSGS D ++++W
Sbjct: 970 PDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLW 1029
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 198
D+ T + ++L HS V AV F+ D + SSS D ++WD+A+G+ +TL + +
Sbjct: 1030 DLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQRTL-EGHSQG 1088
Query: 199 VSFVKFSPNGKYILAATLDNTLKLWD 224
V V FSP+GK + + + D T+KLW+
Sbjct: 1089 VRSVTFSPDGKLLASNSYDGTIKLWN 1114
Score = 334 (122.6 bits), Expect = 8.1e-29, P = 8.1e-29
Identities = 68/180 (37%), Positives = 108/180 (60%)
Query: 45 SSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCL 104
S K+ + W A ++T+ H + V +S D + LVSGS D T+KIW+ ++G+ L
Sbjct: 730 SQLPKVEQTWSAE----QQTLENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELL 785
Query: 105 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRD 164
+TL GHS V F+P L+ SGS+D ++ +WD TG+ L+T H + +V F D
Sbjct: 786 QTLDGHSGTVESLAFSPDGKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPD 845
Query: 165 GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
G + S+S D +IWD A+G+ +TL D + V V FSP+GK + +++LD+T+K+W+
Sbjct: 846 GKELASASDDSTIKIWDLATGELQQTL-DSHSQSVRSVAFSPDGKLLASSSLDSTIKVWN 904
Score = 326 (119.8 bits), Expect = 5.8e-28, P = 5.8e-28
Identities = 67/174 (38%), Positives = 106/174 (60%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L+ TL G + V SV FSP+G+ LAS D IK+W + G+ +T+ GH I V +S
Sbjct: 1120 LQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFS 1179
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
D +LL SGS D+T K+W+ ++G+ L+ +GHS +V F+P L+ S S+ E++++W
Sbjct: 1180 PDGKLLASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFSPDGKLLASSSYGETIKLW 1239
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSS-YDGLCRIWDTASGQCLKTL 191
D TG+ L+TL + +V F+ DG+ + S +D +IWD A+G+ L+ L
Sbjct: 1240 DPVTGELLQTLNDPDESAGSVAFSPDGNRLASVDIFD--TKIWDPATGELLQAL 1291
Score = 230 (86.0 bits), Expect = 9.9e-18, P = 9.9e-18
Identities = 50/133 (37%), Positives = 73/133 (54%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GH+ + SV FSP+G+ LAS S D+ K+W G+ + GH + VA+S D
Sbjct: 1165 TLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFSPDG 1224
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS-FDESVRIWDV 140
+LL S S +T+K+W+ +G+ L+TL F+P N + S FD +IWD
Sbjct: 1225 KLLASSSYGETIKLWDPVTGELLQTLNDPDESAGSVAFSPDGNRLASVDIFD--TKIWDP 1282
Query: 141 RTGKCLKTLPAHS 153
TG+ L+ L HS
Sbjct: 1283 ATGELLQALKGHS 1295
Score = 168 (64.2 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 38/91 (41%), Positives = 55/91 (60%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLL 84
GH+K V SV FSP+G+ LASSS + IK+W G+ +T++ VA+S D L
Sbjct: 1210 GHSKWVESVAFSPDGKLLASSSYGETIKLWDPVTGELLQTLNDPDESAGSVAFSPDGNRL 1269
Query: 85 VSGSDDKTLKIWELSSGKCLKTLKGHSNYVF 115
S D KIW+ ++G+ L+ LKGHS +V+
Sbjct: 1270 AS-VDIFDTKIWDPATGELLQALKGHSKWVW 1299
>CGD|CAL0005013 [details] [associations]
symbol:SWD3 species:5476 "Candida albicans" [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0042800 "histone
methyltransferase activity (H3-K4 specific)" evidence=IEA]
[GO:0051568 "histone H3-K4 methylation" evidence=IEA] [GO:0006348
"chromatin silencing at telomere" evidence=IEA] [GO:0000723
"telomere maintenance" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0005013 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000155
RefSeq:XP_712497.1 ProteinModelPortal:Q59S83 STRING:Q59S83
GeneID:3645890 KEGG:cal:CaO19.3457 Uniprot:Q59S83
Length = 383
Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
Identities = 90/226 (39%), Positives = 145/226 (64%)
Query: 17 YVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA 76
Y +++T+ + +++KFSPNG+ A SS++ I I+ GK T+SGH GISD+
Sbjct: 16 YKIRYTINEPSITFTAIKFSPNGQNFACSSSNGKIYIYNTTTGKLITTLSGHTKGISDIV 75
Query: 77 WSS-DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 135
+S +S +L S SDD T+++W ++ +C+K L+ H+ ++ F + N+++SGS DE++
Sbjct: 76 YSPINSNILASCSDDLTIRLWNITQQRCIKLLRKHTYHITTLKFTQKGNILISGSSDETI 135
Query: 136 RIWDVRT--GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 193
IWD+ + GK L TL AHSDPVS++ D S+IVS+SYDGL R++D + QCLKTL +
Sbjct: 136 TIWDITSNGGKILTTLAAHSDPVSSIALTPDDSIIVSASYDGLMRLFDLQTSQCLKTLTN 195
Query: 194 -------------DD--NPPVSFVKFSPNGKYILAATLDNTLKLWD 224
+D N P++ V+ SPNG++IL ++LD ++LW+
Sbjct: 196 STFGGHGTATASTNDVINFPIAKVELSPNGQFILNSSLDGKIRLWN 241
Score = 141 (54.7 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 41/140 (29%), Positives = 69/140 (49%)
Query: 99 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLP-----AH- 152
+ GK L TL HS+ V P ++IVS S+D +R++D++T +CLKTL H
Sbjct: 143 NGGKILTTLAAHSDPVSSIALTPDDSIIVSASYDGLMRLFDLQTSQCLKTLTNSTFGGHG 202
Query: 153 ------SD----PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 202
+D P++ V + +G I++SS DG R+W+ + KT + +
Sbjct: 203 TATASTNDVINFPIAKVELSPNGQFILNSSLDGKIRLWNYMENKVYKTYQGINGEKIC-E 261
Query: 203 KFSPNGKYILAATLDNTLKL 222
KF+ + K+I N + +
Sbjct: 262 KFNCDIKFITRNVNSNAITI 281
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 348 (127.6 bits), Expect = 1.5e-35, Sum P(2) = 1.5e-35
Identities = 72/204 (35%), Positives = 114/204 (55%)
Query: 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 79
K+ L+GH V+ V F P + S+S D IK+W G FE+T+ GH + D+++
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDH 160
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
+LL S S D T+K+W+ +C++T+ GH + V P + IVS S D+++++W+
Sbjct: 161 TGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
V TG C+KT H + V V N+DG+LI SSS D R+W A+ +C L + ++ V
Sbjct: 221 VATGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATKECKAELREHEHV-V 279
Query: 200 SFVKFSPNGKY--ILAATLDNTLK 221
+ ++P + IL AT T K
Sbjct: 280 ECISWAPESAHPTILEATGSETKK 303
Score = 250 (93.1 bits), Expect = 1.2e-24, Sum P(2) = 1.2e-24
Identities = 52/163 (31%), Positives = 96/163 (58%)
Query: 62 EK-TISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFN 120
EK +SGH+ ++ V + ++VS S+D T+K+W+ +G +TLKGH++ V +F+
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFD 159
Query: 121 PQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 180
L+ S S D ++++WD + +C++T+ H VS+V +G IVS+S D ++W
Sbjct: 160 HTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMW 219
Query: 181 DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 223
+ A+G C+KT V V+ + +G I +++ D T+++W
Sbjct: 220 EVATGYCVKTFTGH-REWVRMVRPNQDGTLIASSSNDQTVRVW 261
Score = 218 (81.8 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 43/118 (36%), Positives = 70/118 (59%)
Query: 107 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGS 166
L GH + V F+P ++IVS S D ++++WD TG +TL H+D V + F+ G
Sbjct: 104 LSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTGK 163
Query: 167 LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
L+ S S D ++WD +C++T+ D+ VS V PNG +I++A+ D T+K+W+
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHN-VSSVAIMPNGDHIVSASRDKTIKMWE 220
Score = 215 (80.7 bits), Expect = 4.3e-17, P = 4.3e-17
Identities = 40/98 (40%), Positives = 63/98 (64%)
Query: 84 LVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 143
L+SGS DKT+K+W++S G CL TL GH N+V +P IVS + D+++RIWD +
Sbjct: 311 LLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWDYKNK 370
Query: 144 KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181
+C KTL AH V+++ F++ +V+ S D ++W+
Sbjct: 371 RCTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 195 (73.7 bits), Expect = 7.0e-15, P = 7.0e-15
Identities = 37/103 (35%), Positives = 60/103 (58%)
Query: 39 GEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWEL 98
G +L S S DK IK+W G T+ GH + V + +VS +DDKTL+IW+
Sbjct: 308 GPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWDY 367
Query: 99 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
+ +C KTL H ++V +F+ + +V+GS D++V++W+ R
Sbjct: 368 KNKRCTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 174 (66.3 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 35/101 (34%), Positives = 59/101 (58%)
Query: 126 IVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 185
++SGS D+++++WDV G CL TL H + V V + G IVS + D RIWD +
Sbjct: 311 LLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWDYKNK 370
Query: 186 QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSK 226
+C KTL ++ V+ + F Y++ ++D T+K+W+ +
Sbjct: 371 RCTKTLSAHEHF-VTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 133 (51.9 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 25/76 (32%), Positives = 45/76 (59%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GH V V P G+++ S + DK ++IW + + KT+S H+ ++ + + +
Sbjct: 333 TLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWDYKNKRCTKTLSAHEHFVTSLDFHKTA 392
Query: 82 RLLVSGSDDKTLKIWE 97
+V+GS D+T+K+WE
Sbjct: 393 PYVVTGSVDQTVKVWE 408
Score = 129 (50.5 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 26/64 (40%), Positives = 37/64 (57%)
Query: 163 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 222
+ G ++S S D ++WD + G CL TL+ DN V V P GKYI++ D TL++
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNW-VRGVLVHPGGKYIVSCADDKTLRI 364
Query: 223 WDSK 226
WD K
Sbjct: 365 WDYK 368
Score = 52 (23.4 bits), Expect = 1.5e-35, Sum P(2) = 1.5e-35
Identities = 7/20 (35%), Positives = 14/20 (70%)
Query: 208 GKYILAATLDNTLKLWDSKV 227
G ++L+ + D T+K+WD +
Sbjct: 308 GPFLLSGSRDKTIKMWDVSI 327
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 383 (139.9 bits), Expect = 3.3e-35, P = 3.3e-35
Identities = 83/206 (40%), Positives = 119/206 (57%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L+ TL GH+ V SV FS + LAS+S D +KIW G + T+ GH+ + V +S
Sbjct: 330 LQHTLEGHSDLVRSVIFSHDSRLLASAS-DSTVKIWDTGTGSLQHTLEGHRDWVRSVIFS 388
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
DS+LL S SDD T+KIW+ +G TL+GH ++V F+ S L+ S S D +V+IW
Sbjct: 389 HDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIW 448
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 198
D TG TL H D V +V F+ D L+ S+S D RIWDT G TL + +
Sbjct: 449 DTGTGSLQHTLEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTL-EGHSSL 507
Query: 199 VSFVKFSPNGKYILAATLDNTLKLWD 224
V+ V FS + + + +A+ D T+++WD
Sbjct: 508 VTSVSFSHDSRLLASASNDQTVRIWD 533
Score = 369 (135.0 bits), Expect = 1.3e-33, P = 1.3e-33
Identities = 80/204 (39%), Positives = 116/204 (56%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
L GH AV SV +S + LAS+S D+ +KIW G + T+ GH + V +S DSR
Sbjct: 292 LEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFSHDSR 351
Query: 83 LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 142
LL S SD T+KIW+ +G TL+GH ++V F+ S L+ S S D +V+IWD T
Sbjct: 352 LLASASDS-TVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGT 410
Query: 143 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 202
G TL H D V +V F+ D L+ S+S D +IWDT +G TL + V V
Sbjct: 411 GSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTL-EGHRDWVRSV 469
Query: 203 KFSPNGKYILAATLDNTLKLWDSK 226
FS + + + +A+ D T+++WD++
Sbjct: 470 IFSHDSRLLASASDDRTVRIWDTE 493
Score = 309 (113.8 bits), Expect = 6.3e-27, P = 6.3e-27
Identities = 65/163 (39%), Positives = 97/163 (59%)
Query: 63 KTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQ 122
+ + GH+ + V++S DSRLL S SDD+T+KIW+ +G TL+GHS+ V F+
Sbjct: 290 QALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFSHD 349
Query: 123 SNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 182
S L+ S S D +V+IWD TG TL H D V +V F+ D L+ S+S D +IWDT
Sbjct: 350 SRLLASAS-DSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDT 408
Query: 183 ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225
+G TL + V V FS + + + +A+ D+T+K+WD+
Sbjct: 409 GTGSLQHTL-EGHRDWVRSVIFSHDSQLLASASDDSTVKIWDT 450
Score = 277 (102.6 bits), Expect = 2.0e-23, P = 2.0e-23
Identities = 59/149 (39%), Positives = 86/149 (57%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L+ TL GH V SV FS + + LAS+S D +KIW G + T+ GH+ + V +S
Sbjct: 413 LQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFS 472
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
DSRLL S SDD+T++IW+ G TL+GHS+ V +F+ S L+ S S D++VRIW
Sbjct: 473 HDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSHDSRLLASASNDQTVRIW 532
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSL 167
D+ T + + A+ F++ SL
Sbjct: 533 DIEARSLQHTFDLDAT-IEAMRFDKATSL 560
Score = 218 (81.8 bits), Expect = 4.9e-17, P = 4.9e-17
Identities = 47/123 (38%), Positives = 71/123 (57%)
Query: 103 CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFN 162
CL+ L+GH V +++ S L+ S S D +V+IWD TG TL HSD V +V F+
Sbjct: 288 CLQALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFS 347
Query: 163 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 222
D L+ S+S D +IWDT +G TL + V V FS + + + +A+ D+T+K+
Sbjct: 348 HDSRLLASAS-DSTVKIWDTGTGSLQHTL-EGHRDWVRSVIFSHDSQLLASASDDSTVKI 405
Query: 223 WDS 225
WD+
Sbjct: 406 WDT 408
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 390 (142.3 bits), Expect = 1.4e-34, P = 1.4e-34
Identities = 81/199 (40%), Positives = 116/199 (58%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLL 84
GH +AV SV FS + LAS+S D +KIW + T+ GH + V +S DSRLL
Sbjct: 261 GHDRAVGSVSFSHDSRLLASASGDGTVKIWDTATSFLQNTLEGHNEWVKSVVFSHDSRLL 320
Query: 85 VSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK 144
S SDD T+KIW+ ++G + LKGH++ V F+ S LI SGS D +VRIW+ TG
Sbjct: 321 ASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTTGL 380
Query: 145 CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKF 204
T H D V AV F D + S+S G +IWDT +G L+ +++ + V+ V F
Sbjct: 381 LRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGS-LQNVLEGHDDCVNSVSF 439
Query: 205 SPNGKYILAATLDNTLKLW 223
SP+ + + +A+ D T+K+W
Sbjct: 440 SPDSRLLASASDDRTVKIW 458
Score = 385 (140.6 bits), Expect = 4.8e-34, P = 4.8e-34
Identities = 80/209 (38%), Positives = 116/209 (55%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L+ L GH V+SV FSP+ LAS+S D+ +KIW A G ++T+ GH + V +S
Sbjct: 423 LQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFS 482
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
DSRL+ S SDD T+KIW+ ++ L+ H N+V F+ S L+ S S D +V+IW
Sbjct: 483 HDSRLIASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIW 542
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 198
D TG TL H D V++V F+ D L+ S+S DG +IW A+G T
Sbjct: 543 DTATGSLENTLEGHDDRVNSVSFSPDSRLLASASDDGTVKIWYAATGTVQHTFDGSGRVA 602
Query: 199 VSFVKFSPNGKYILAATLDNTLKLWDSKV 227
+S FS + +A D T+K+WD ++
Sbjct: 603 ISLA-FSHTSNLLASAMDDGTVKIWDMEI 630
Score = 374 (136.7 bits), Expect = 7.1e-33, P = 7.1e-33
Identities = 80/210 (38%), Positives = 119/210 (56%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L+ TL GH + V SV FS + LAS+S D +KIW G ++ + GH + V +S
Sbjct: 297 LQNTLEGHNEWVKSVVFSHDSRLLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFS 356
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
DSRL+ SGS+D+T++IWE ++G T + H + V +F S + S S +V+IW
Sbjct: 357 HDSRLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIW 416
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 198
D RTG L H D V++V F+ D L+ S+S D +IW A+G +TL + N
Sbjct: 417 DTRTGSLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTL-EGHNDW 475
Query: 199 VSFVKFSPNGKYILAATLDNTLKLWDSKVV 228
V V FS + + I +A+ D T+K+WD+ V
Sbjct: 476 VRSVVFSHDSRLIASASDDMTVKIWDTATV 505
Score = 369 (135.0 bits), Expect = 2.4e-32, P = 2.4e-32
Identities = 78/206 (37%), Positives = 121/206 (58%)
Query: 18 VLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW 77
+L+ T H +V +V F+ + LAS+S +KIW G + + GH ++ V++
Sbjct: 380 LLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSF 439
Query: 78 SSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 137
S DSRLL S SDD+T+KIW ++G +TL+GH+++V F+ S LI S S D +V+I
Sbjct: 440 SPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKI 499
Query: 138 WDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 197
WD T L +H + V +V F+ D L+ S+S D +IWDTA+G TL D+
Sbjct: 500 WDTATVPLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIWDTATGSLENTLEGHDDR 559
Query: 198 PVSFVKFSPNGKYILAATLDNTLKLW 223
V+ V FSP+ + + +A+ D T+K+W
Sbjct: 560 -VNSVSFSPDSRLLASASDDGTVKIW 584
Score = 349 (127.9 bits), Expect = 3.2e-30, P = 3.2e-30
Identities = 77/207 (37%), Positives = 114/207 (55%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L+ L GH +V SV FS + +AS S D+ ++IW G T H+ + V+++
Sbjct: 339 LQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFA 398
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
DSR L S SD +KIW+ +G L+GH + V +F+P S L+ S S D +V+IW
Sbjct: 399 HDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIW 458
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 198
TG +TL H+D V +V F+ D LI S+S D +IWDTA+ L DN
Sbjct: 459 HAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTATVPLQNNLESHDNW- 517
Query: 199 VSFVKFSPNGKYILAATLDNTLKLWDS 225
V V FS + + + +A+ D T+K+WD+
Sbjct: 518 VRSVVFSHDSRLLASASDDMTVKIWDT 544
Score = 211 (79.3 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 54/161 (33%), Positives = 82/161 (50%)
Query: 78 SSDSRLLVSGSDDKTLKIWELSSGKC--LKT-----------LKGHSNYVFCCNFNPQSN 124
SSD LL D +W +S KC L+ KGH V +F+ S
Sbjct: 217 SSDIDLLDVVEDSYRFALWNISGIKCAPLQVYASALLFSPAQFKGHDRAVGSVSFSHDSR 276
Query: 125 LIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 184
L+ S S D +V+IWD T TL H++ V +V F+ D L+ S+S DG +IWDTA+
Sbjct: 277 LLASASGDGTVKIWDTATSFLQNTLEGHNEWVKSVVFSHDSRLLASASDDGTVKIWDTAT 336
Query: 185 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225
G L+ ++ N V V FS + + I + + D T+++W++
Sbjct: 337 GT-LQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWET 376
Score = 131 (51.2 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 28/78 (35%), Positives = 45/78 (57%)
Query: 152 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 211
H V +V F+ D L+ S+S DG +IWDTA+ L+ ++ N V V FS + + +
Sbjct: 262 HDRAVGSVSFSHDSRLLASASGDGTVKIWDTATS-FLQNTLEGHNEWVKSVVFSHDSRLL 320
Query: 212 LAATLDNTLKLWDSKVVT 229
+A+ D T+K+WD+ T
Sbjct: 321 ASASDDGTVKIWDTATGT 338
>ASPGD|ASPL0000031743 [details] [associations]
symbol:AN8505 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001305 ProteinModelPortal:C8VEM4
EnsemblFungi:CADANIAT00002997 HOGENOM:HOG000234485 OMA:WDAQTGS
Uniprot:C8VEM4
Length = 954
Score = 384 (140.2 bits), Expect = 1.9e-34, P = 1.9e-34
Identities = 80/190 (42%), Positives = 118/190 (62%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GH+ +V +V LAS S D+ +++W G ++T+ GH + VA+S D
Sbjct: 698 TLEGHSNSVWAV--------LASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSPDG 749
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
RLL SGS DKT+++W+ ++G +TL+GHSN+V F+P L+ SGSFD++VR+WD
Sbjct: 750 RLLASGSFDKTVRLWDPATGSLQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWDPA 809
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 201
TG +TL HSD V +V F+ DG L+ S S+D R+WD A+G +TLI V+
Sbjct: 810 TGSLQQTLRGHSDTVRSVAFSPDGRLLASGSFDKTVRLWDPATGTLQQTLIIKGT--VTE 867
Query: 202 VKFSPNGKYI 211
++FS +G YI
Sbjct: 868 LQFSQDGSYI 877
Score = 334 (122.6 bits), Expect = 4.5e-29, P = 4.5e-29
Identities = 76/209 (36%), Positives = 118/209 (56%)
Query: 17 YVLKFTLAGHTKAVSSVKFSPN-GEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV 75
Y A T + S FS + W+ K+ + WGA +T+ GH S+
Sbjct: 657 YCAGLVFAPQTALIRS-NFSEDLPSWICQ--LPKVNEKWGAE----LQTLEGH----SNS 705
Query: 76 AWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 135
W+ +L SGSDD+T+++W+ ++G +TL+GHS +V F+P L+ SGSFD++V
Sbjct: 706 VWA----VLASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSPDGRLLASGSFDKTV 761
Query: 136 RIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD 195
R+WD TG +TL HS+ V +V F+ DG L+ S S+D R+WD A+G +TL
Sbjct: 762 RLWDPATGSLQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHS 821
Query: 196 NPPVSFVKFSPNGKYILAATLDNTLKLWD 224
+ V V FSP+G+ + + + D T++LWD
Sbjct: 822 DT-VRSVAFSPDGRLLASGSFDKTVRLWD 849
Score = 325 (119.5 bits), Expect = 4.1e-28, P = 4.1e-28
Identities = 66/150 (44%), Positives = 96/150 (64%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L+ TL GH+ V SV FSP+G LAS S DK +++W G ++T+ GH + VA+S
Sbjct: 729 LQQTLEGHSGWVLSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSNWVRSVAFS 788
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
D RLL SGS DKT+++W+ ++G +TL+GHS+ V F+P L+ SGSFD++VR+W
Sbjct: 789 PDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSDTVRSVAFSPDGRLLASGSFDKTVRLW 848
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLI 168
D TG +TL V+ + F++DGS I
Sbjct: 849 DPATGTLQQTLIIKGT-VTELQFSQDGSYI 877
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 65/171 (38%), Positives = 98/171 (57%)
Query: 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 79
K L GH ++SVKF P+ + S+S D IK+W G+FE+T+ GH + D+ +
Sbjct: 99 KHILTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDK 158
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
LL S S D T+K+W+ + C+KTL GH + V C F P + ++S S D+++++W+
Sbjct: 159 TGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWE 218
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 190
TG C+KTL H D V + + DGS I S S D + W+ G+CL T
Sbjct: 219 AATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGECLAT 269
Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 62/164 (37%), Positives = 99/164 (60%)
Query: 62 EKTI-SGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFN 120
EK I +GH+ I+ V + L+VS S+D T+K+W+ SG+ +TLKGH+N V +F+
Sbjct: 98 EKHILTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFD 157
Query: 121 PQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 180
NL+ S S D ++++WD +T C+KTL H VS V F G ++SSS D ++W
Sbjct: 158 KTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVW 217
Query: 181 DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
+ A+G C+KTL+ ++ V + S +G I + + D T+K W+
Sbjct: 218 EAATGYCIKTLVGHEDW-VRKITVSEDGSCIASCSNDQTIKTWN 260
Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 72/204 (35%), Positives = 110/204 (53%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GH VS V+F+P+G+ L SSS DK IK+W A G KT+ GH+ + + S D
Sbjct: 185 TLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAATGYCIKTLVGHEDWVRKITVSEDG 244
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
+ S S+D+T+K W + G+CL T + HS+ V C F+ + + + GS +
Sbjct: 245 SCIASCSNDQTIKTWNIVKGECLATYREHSHVVECLAFSTANIIDIPGS------LLSTP 298
Query: 142 TGKC-LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 200
GK +K P + V + + + S D +IW+ A+G+CL T I DN V
Sbjct: 299 EGKSKVKQGPG-GNLVGQCGY------LATGSRDKTIKIWELATGRCLATYIGHDNW-VR 350
Query: 201 FVKFSPNGKYILAATLDNTLKLWD 224
V+F P GK++L+ D T+++WD
Sbjct: 351 AVRFHPCGKFLLSVGDDKTIRVWD 374
Score = 271 (100.5 bits), Expect = 2.2e-23, P = 2.2e-23
Identities = 66/203 (32%), Positives = 102/203 (50%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GHT AV + F G LAS SAD IK+W KT+ GH +S V ++
Sbjct: 143 TLKGHTNAVQDIDFDKTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSG 202
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
L+S S DKT+K+WE ++G C+KTL GH ++V + + I S S D++++ W++
Sbjct: 203 DQLISSSRDKTIKVWEAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIV 262
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 201
G+CL T HS V + F+ + + S + T G K+ + P +
Sbjct: 263 KGECLATYREHSHVVECLAFSTANIIDIPGS------LLSTPEG---KSKVKQ-GPGGNL 312
Query: 202 VKFSPNGKYILAATLDNTLKLWD 224
V G Y+ + D T+K+W+
Sbjct: 313 V--GQCG-YLATGSRDKTIKIWE 332
Score = 242 (90.2 bits), Expect = 4.5e-20, P = 4.5e-20
Identities = 61/207 (29%), Positives = 102/207 (49%)
Query: 17 YVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA 76
Y +K TL GH V + S +G +AS S D+ IK W G+ T H + +A
Sbjct: 223 YCIK-TLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGECLATYREHSHVVECLA 281
Query: 77 WSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 136
+S+ + + + GS + GK K +G N Q + +GS D++++
Sbjct: 282 FSTANIIDIPGS------LLSTPEGKS-KVKQGPGG-----NLVGQCGYLATGSRDKTIK 329
Query: 137 IWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 196
IW++ TG+CL T H + V AV F+ G ++S D R+WD A G+C+KT+ +
Sbjct: 330 IWELATGRCLATYIGHDNWVRAVRFHPCGKFLLSVGDDKTIRVWDIAQGRCIKTINEAHT 389
Query: 197 PPVSFVKFSPNGKYILAATLDNTLKLW 223
+S + F + +I +D+ +K+W
Sbjct: 390 HFISCLDFCLHNPHIATGGVDDVIKVW 416
Score = 227 (85.0 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 41/119 (34%), Positives = 76/119 (63%)
Query: 107 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGS 166
L GH N + F+P +L+VS S D ++++WD +G+ +TL H++ V + F++ G+
Sbjct: 102 LTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGN 161
Query: 167 LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225
L+ S S D ++WD + C+KTL D+ VS V+F+P+G +++++ D T+K+W++
Sbjct: 162 LLASCSADLTIKLWDFQTYDCVKTLHGHDHN-VSCVRFTPSGDQLISSSRDKTIKVWEA 219
Score = 188 (71.2 bits), Expect = 4.3e-14, P = 4.3e-14
Identities = 37/118 (31%), Positives = 67/118 (56%)
Query: 31 SSVKFSPNGE------WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLL 84
S VK P G +LA+ S DK IKIW G+ T GH + V + + L
Sbjct: 302 SKVKQGPGGNLVGQCGYLATGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPCGKFL 361
Query: 85 VSGSDDKTLKIWELSSGKCLKTL-KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
+S DDKT+++W+++ G+C+KT+ + H++++ C +F + I +G D+ +++W ++
Sbjct: 362 LSVGDDKTIRVWDIAQGRCIKTINEAHTHFISCLDFCLHNPHIATGGVDDVIKVWKLQ 419
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 82/208 (39%), Positives = 120/208 (57%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
LK T+ GH+ V SV FSPNG+ +W G + TI GH + VA+S
Sbjct: 117 LKHTMEGHSDRVESVAFSPNGQ------------LWNPAIGSLKHTIEGHSDWVLSVAFS 164
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKC-LK-TLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 136
D +LL SGS +KT+K+W+ S C LK TL GHSN+V F+P L+ SGS D +++
Sbjct: 165 PDGQLLASGSAEKTIKLWD--SATCGLKHTLGGHSNWVLPLVFSPDGRLLASGSNDATIK 222
Query: 137 IWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 196
+WD +G TL HS+ + ++ F+ +G L+ S S D ++WDTA+G TL +
Sbjct: 223 LWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDATIKLWDTATGSFRHTLKGHSD 282
Query: 197 PPVSFVKFSPNGKYILAATLDNTLKLWD 224
+S V FSP+ + + + + DNT+KLWD
Sbjct: 283 MVLSVV-FSPDSQLLESGSGDNTIKLWD 309
Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
Identities = 72/167 (43%), Positives = 102/167 (61%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
LK T+ GH+ V SV FSP+G+ LAS SA+K IK+W + + T+ GH + + +S
Sbjct: 147 LKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHSNWVLPLVFS 206
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
D RLL SGS+D T+K+W+ SG TL+GHSN + F+P L+ SGS D ++++W
Sbjct: 207 PDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDATIKLW 266
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 185
D TG TL HSD V +V F+ D L+ S S D ++WD A+G
Sbjct: 267 DTATGSFRHTLKGHSDMVLSVVFSPDSQLLESGSGDNTIKLWDPATG 313
Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 74/207 (35%), Positives = 116/207 (56%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
LK TL GH+ +V SV FSPNG+ LAS S+D IK+W + + T+ GH + VA+S
Sbjct: 75 LKQTLEGHSSSVQSVAFSPNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFS 134
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
+ +L W + G T++GHS++V F+P L+ SGS ++++++W
Sbjct: 135 PNGQL------------WNPAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLW 182
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 198
D T TL HS+ V + F+ DG L+ S S D ++WD SG LK ++ +
Sbjct: 183 DSATCGLKHTLGGHSNWVLPLVFSPDGRLLASGSNDATIKLWDPPSGS-LKHTLEGHSNK 241
Query: 199 VSFVKFSPNGKYILAATLDNTLKLWDS 225
+ + FSPNG+ + + + D T+KLWD+
Sbjct: 242 IESLAFSPNGQLLASGSSDATIKLWDT 268
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 73/203 (35%), Positives = 109/203 (53%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GH+ + +V FSP+G LAS S D IK+W G ++T+ GH + VA+S +
Sbjct: 36 TLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSPNG 95
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
+LL SGS D T+K+W +S T++GHS+ V F+P L W+
Sbjct: 96 QLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQL------------WNPA 143
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 201
G T+ HSD V +V F+ DG L+ S S + ++WD+A+ TL N +
Sbjct: 144 IGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHSNWVLPL 203
Query: 202 VKFSPNGKYILAATLDNTLKLWD 224
V FSP+G+ + + + D T+KLWD
Sbjct: 204 V-FSPDGRLLASGSNDATIKLWD 225
Score = 269 (99.8 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 60/163 (36%), Positives = 93/163 (57%)
Query: 63 KTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQ 122
+T+ GH I V +S D RLL SGS+D T+K+W+ +SG +TL+GHS+ V F+P
Sbjct: 35 QTLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSPN 94
Query: 123 SNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 182
L+ SGS D ++++W+ + T+ HSD V +V F+ +G L W+
Sbjct: 95 GQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQL------------WNP 142
Query: 183 ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225
A G LK I+ + V V FSP+G+ + + + + T+KLWDS
Sbjct: 143 AIGS-LKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDS 184
Score = 203 (76.5 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 41/109 (37%), Positives = 66/109 (60%)
Query: 101 GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVH 160
G L+TL+GHS+++ F+P L+ SGS D ++++WD +G +TL HS V +V
Sbjct: 31 GPELQTLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVA 90
Query: 161 FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK 209
F+ +G L+ S S D ++W++AS LK ++ + V V FSPNG+
Sbjct: 91 FSPNGQLLASGSSDTTIKLWNSASDS-LKHTMEGHSDRVESVAFSPNGQ 138
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
Identities = 74/205 (36%), Positives = 117/205 (57%)
Query: 22 TLAGHTKAVSSVKFS-PNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 80
TL GH V ++ F+ P G+ +A+ S DK K+W GK T GH I ++++
Sbjct: 129 TLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQ 188
Query: 81 SRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 140
S L+ +GS D T K+W++ SG+ + TL GHS + +FN N I++GSFD +V +W+
Sbjct: 189 STLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEA 248
Query: 141 RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 200
TG+ + TL H +S+ FN D SLI++ S D C++WD +G+C+ TL D+ +
Sbjct: 249 DTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILD 308
Query: 201 FVKFSPNGKYILAATLDNTLKLWDS 225
F GK I A+ D T +++ +
Sbjct: 309 SC-FDYTGKLIATASADGTARIFSA 332
Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 66/210 (31%), Positives = 120/210 (57%)
Query: 17 YVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA 76
Y+ K L H +++V + +G + S D+ K+W G+ T+ GH+ + +A
Sbjct: 83 YLFK-VLRAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIA 141
Query: 77 WSSD-SRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 135
+++ + +GS DKT K+W + +GKC T +GH+ + C +FNPQS L+ +GS D +
Sbjct: 142 FNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTA 201
Query: 136 RIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD 195
++WD+++G+ + TL HS + ++ FN G+ I++ S+D +W+ +G+ + TLI
Sbjct: 202 KLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHC 261
Query: 196 NPPVSFVKFSPNGKYILAATLDNTLKLWDS 225
+S F+ + IL ++D T KLWD+
Sbjct: 262 -AEISSAVFNWDCSLILTGSMDKTCKLWDA 290
Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
Identities = 64/205 (31%), Positives = 114/205 (55%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
T GHT + + F+P +A+ S D K+W G+ T++GH I +++++
Sbjct: 172 TFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSG 231
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
+++GS D T+ +WE +G+ + TL GH + FN +LI++GS D++ ++WD
Sbjct: 232 NRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAV 291
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 201
GKC+ TL H D + F+ G LI ++S DG RI+ A+ +C+ T ++ +S
Sbjct: 292 NGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRECV-TKLEGHEGEISK 350
Query: 202 VKFSPNGKYILAATLDNTLKLWDSK 226
+ F+P G +L + D T ++WD++
Sbjct: 351 ISFNPQGNRLLTGSSDKTARIWDAQ 375
Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
Identities = 67/203 (33%), Positives = 110/203 (54%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 80
FTL GH+ + S+ F+ +G + + S D + +W A G+ T+ GH IS ++ D
Sbjct: 213 FTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWD 272
Query: 81 SRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 140
L+++GS DKT K+W+ +GKC+ TL GH + + F+ LI + S D + RI+
Sbjct: 273 CSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSA 332
Query: 141 RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 200
T +C+ L H +S + FN G+ +++ S D RIWD +GQCL+ L + +
Sbjct: 333 ATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQVL-EGHTDEIF 391
Query: 201 FVKFSPNGKYILAATLDNTLKLW 223
F+ G I+ + DNT ++W
Sbjct: 392 SCAFNYKGDIIITGSKDNTCRIW 414
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
Identities = 77/205 (37%), Positives = 116/205 (56%)
Query: 22 TLAGHTKAVSSVKFS-PNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 80
TL GH V ++ F+ P G+ +A+ S DK K+W A GK T GH I +A++
Sbjct: 129 TLEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQ 188
Query: 81 SRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 140
S L+ +GS D T K+W++ SG+ + TL GH + FN + +V+GSFD + +WDV
Sbjct: 189 STLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDV 248
Query: 141 RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 200
+G+ + L H +S V FN D SLI ++S D C++WD GQCL TL+ N V
Sbjct: 249 PSGRKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGH-NDEVL 307
Query: 201 FVKFSPNGKYILAATLDNTLKLWDS 225
V F+ G+ I A+ D T +++ +
Sbjct: 308 DVCFNYTGQLIATASADGTSRVFST 332
Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 70/203 (34%), Positives = 111/203 (54%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 80
+T GHT + + F+P +A+ S D K+W G+ T++GH I + +++
Sbjct: 171 YTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTT 230
Query: 81 SRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 140
LV+GS D T +W++ SG+ + L GH + C FN +LI + S D+S ++WD
Sbjct: 231 GDRLVTGSFDHTAILWDVPSGRKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDA 290
Query: 141 RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 200
G+CL TL H+D V V FN G LI ++S DG R++ T + QCL L + +S
Sbjct: 291 EGGQCLATLLGHNDEVLDVCFNYTGQLIATASADGTSRVFSTDTFQCLCQL-EGHKGEIS 349
Query: 201 FVKFSPNGKYILAATLDNTLKLW 223
V F+ G +L A++D T ++W
Sbjct: 350 KVCFNAQGSRVLTASVDKTSRVW 372
Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 67/211 (31%), Positives = 117/211 (55%)
Query: 17 YVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA 76
Y+ + L H +++V F+ +G + S D+ KIW G+ T+ GH+ + +A
Sbjct: 83 YLFR-ALQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIA 141
Query: 77 WSSD-SRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 135
+++ + +GS DKT K+W +GKC T +GH+ + C FNPQS L+ +GS D +
Sbjct: 142 FNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTA 201
Query: 136 RIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD 195
++WDV +G+ + TL H + ++ FN G +V+ S+D +WD SG+ + L
Sbjct: 202 KLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVL-SGH 260
Query: 196 NPPVSFVKFSPNGKYILAATLDNTLKLWDSK 226
+S V+F+ + I A+LD + K+WD++
Sbjct: 261 RGEISCVQFNWDCSLIATASLDKSCKVWDAE 291
Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
Identities = 67/202 (33%), Positives = 107/202 (52%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TLAGH + S+ F+ G+ L + S D +W G+ +SGH+ IS V ++ D
Sbjct: 214 TLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLSGHRGEISCVQFNWDC 273
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
L+ + S DK+ K+W+ G+CL TL GH++ V FN LI + S D + R++
Sbjct: 274 SLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQLIATASADGTSRVFSTD 333
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 201
T +CL L H +S V FN GS ++++S D R+W +G CL+ L + + +
Sbjct: 334 TFQCLCQLEGHKGEISKVCFNAQGSRVLTASVDKTSRVWCVKTGACLQVL-EGHSDEIFS 392
Query: 202 VKFSPNGKYILAATLDNTLKLW 223
F+ G I+ + DNT ++W
Sbjct: 393 CAFNYEGDTIITGSKDNTCRIW 414
Score = 160 (61.4 bits), Expect = 8.3e-10, P = 8.3e-10
Identities = 37/105 (35%), Positives = 53/105 (50%)
Query: 122 QSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181
Q L++ E V D R + L AH P++ V FN+ GS ++ SYD C+IWD
Sbjct: 62 QVKLLIC-KLQEKVGQKDERKFYLFRALQAHILPLTNVAFNKSGSCFITGSYDRTCKIWD 120
Query: 182 TASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSK 226
TASG+ L TL N + +P G + + D T KLW ++
Sbjct: 121 TASGEELHTLEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAE 165
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 361 (132.1 bits), Expect = 4.1e-33, P = 4.1e-33
Identities = 72/205 (35%), Positives = 117/205 (57%)
Query: 22 TLAGHTKAVSSVKFS-PNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 80
TL GH V ++ F+ P G+ +A+ S DK K+W GK T GH I ++++
Sbjct: 129 TLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQ 188
Query: 81 SRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 140
S L+ +GS D T K+W++ +G+ + TL+GHS + +FN + I++GSFD +V +WD
Sbjct: 189 STLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDA 248
Query: 141 RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 200
TG+ + L H +S+ FN D SLI++ S D C++WD +G+C+ TL D+ +
Sbjct: 249 DTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILD 308
Query: 201 FVKFSPNGKYILAATLDNTLKLWDS 225
F GK I A+ D T +++ +
Sbjct: 309 SC-FDYTGKLIATASADGTARIFSA 332
Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
Identities = 65/203 (32%), Positives = 112/203 (55%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 80
+TL GH+ + S+ F+ +G+ + + S D + +W A G+ + GH IS +++ D
Sbjct: 213 YTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWD 272
Query: 81 SRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 140
L+++GS DKT K+W+ ++GKC+ TL GH + + F+ LI + S D + RI+
Sbjct: 273 CSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSA 332
Query: 141 RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 200
T KC+ L H +S + FN G+ +++ S D RIWD +GQCL+ L + +
Sbjct: 333 ATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVL-EGHTDEIF 391
Query: 201 FVKFSPNGKYILAATLDNTLKLW 223
F+ G ++ + DNT ++W
Sbjct: 392 SCAFNYKGNIVITGSKDNTCRIW 414
Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
Identities = 66/210 (31%), Positives = 117/210 (55%)
Query: 17 YVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA 76
Y+ K L H +++V + +G + S D+ K+W G+ T+ GH+ + +A
Sbjct: 83 YLFK-VLKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIA 141
Query: 77 WSSD-SRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 135
+++ + +GS DKT K+W + +GKC T +GH+ + C +FNPQS L+ +GS D +
Sbjct: 142 FNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTA 201
Query: 136 RIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD 195
++WD++ G+ + TL HS + ++ FN G I++ S+D +WD +G+ + LI
Sbjct: 202 KLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHC 261
Query: 196 NPPVSFVKFSPNGKYILAATLDNTLKLWDS 225
+S F+ + IL ++D T KLWD+
Sbjct: 262 -AEISSASFNWDCSLILTGSMDKTCKLWDA 290
Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 62/205 (30%), Positives = 114/205 (55%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
T GHT + + F+P +A+ S D K+W +G+ T+ GH I +++++
Sbjct: 172 TFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSG 231
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
+++GS D T+ +W+ +G+ + L GH + +FN +LI++GS D++ ++WD
Sbjct: 232 DRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDAT 291
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 201
GKC+ TL H D + F+ G LI ++S DG RI+ A+ +C+ L + +S
Sbjct: 292 NGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKL-EGHEGEISK 350
Query: 202 VKFSPNGKYILAATLDNTLKLWDSK 226
+ F+P G ++L + D T ++WD++
Sbjct: 351 ISFNPQGNHLLTGSSDKTARIWDAQ 375
>DICTYBASE|DDB_G0275045 [details] [associations]
symbol:gpbB "Guanine nucleotide-binding protein
subunit beta-like protein" species:44689 "Dictyostelium discoideum"
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275045 GO:GO:0045335
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000013 KO:K14753 OMA:IRVWQVM
EMBL:U27537 RefSeq:XP_643839.1 ProteinModelPortal:P46800 SMR:P46800
IntAct:P46800 STRING:P46800 SWISS-2DPAGE:P46800 PRIDE:P46800
EnsemblProtists:DDB0185122 GeneID:8619886 KEGG:ddi:DDB_G0275045
Uniprot:P46800
Length = 329
Score = 360 (131.8 bits), Expect = 5.2e-33, P = 5.2e-33
Identities = 79/217 (36%), Positives = 124/217 (57%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
+L GH+ V V S +G++ S S D +++W G + GH + VA+SSD+
Sbjct: 65 SLKGHSHFVQDVVISHDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSDN 124
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKG---HSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
R ++SGS D T+K+W + G+C TL+G H ++V C F+P + IVSGS+D V+IW
Sbjct: 125 RQIISGSRDATIKVWN-TLGECKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIW 183
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 198
D+++ KC TL H+ V+ V + DGSL S D +W+ +SG+ L L +
Sbjct: 184 DIKSFKCNHTLTDHTGYVNTVTISPDGSLCASGGKDTFACLWELSSGKPLYKL--EARNT 241
Query: 199 VSFVKFSPNGKYILAATLDNTLKLWD--SKVVTPAII 233
++ + FSPN KY L+A D+ + +WD +K V I+
Sbjct: 242 INALAFSPN-KYWLSAATDDKIIIWDLLTKQVLAEIV 277
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 73/213 (34%), Positives = 112/213 (52%)
Query: 22 TLAGHTKAVSSVKFSP-NGEWLASSSADKLIKIW------GAYDGKFEKTISGHKLGISD 74
+L GH V+S+ SP N + + SSS DK + +W GK +++ GH + D
Sbjct: 16 SLVGHNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKAHRSLKGHSHFVQD 75
Query: 75 VAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 134
V S D + +SGS D TL++W+++ G + KGH+ V F+ + I+SGS D +
Sbjct: 76 VVISHDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSDNRQIISGSRDAT 135
Query: 135 VRIWDVRTGKCLKTL--P-AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 191
+++W+ G+C TL P AH D VS + F+ + IVS S+D +IWD S +C TL
Sbjct: 136 IKVWNT-LGECKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIWDIKSFKCNHTL 194
Query: 192 IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
D V+ V SP+G + D LW+
Sbjct: 195 TDHTGY-VNTVTISPDGSLCASGGKDTFACLWE 226
Score = 231 (86.4 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 56/173 (32%), Positives = 93/173 (53%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG---HKLGISDVAWSSDS 81
GHT+ V SV FS + + S S D IK+W G+ + T+ G H+ +S + +S ++
Sbjct: 110 GHTQDVMSVAFSSDNRQIISGSRDATIKVWNTL-GECKFTLEGPEAHQDWVSCIRFSPNT 168
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
+VSGS D +KIW++ S KC TL H+ YV +P +L SG D +W++
Sbjct: 169 PTIVSGSWDNKVKIWDIKSFKCNHTLTDHTGYVNTVTISPDGSLCASGGKDTFACLWELS 228
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD 194
+GK L L A + ++A+ F+ + +S++ D IWD + Q L ++ +
Sbjct: 229 SGKPLYKLEARNT-INALAFSPN-KYWLSAATDDKIIIWDLLTKQVLAEIVPE 279
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 76/205 (37%), Positives = 118/205 (57%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKLGISDVAWSS 79
+ AGH AV+ V FSP+G LAS S DK ++IW + K E T+ H + V + S
Sbjct: 55 YRFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIW-IPNVKGESTVFRAHTATVRSVHFCS 113
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
D + LV+ SDDKT+K+W K L +L H N+V C F+P LIVS S D++V++WD
Sbjct: 114 DGQSLVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWD 173
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
+ +C+ + H V+ V F+ G+ I ++S D ++WD + + L+ + V
Sbjct: 174 KTSRECVHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHY-QLHSAAV 232
Query: 200 SFVKFSPNGKYILAATLDNTLKLWD 224
+ + F P+G Y+L A+ D+TLK+ D
Sbjct: 233 NALSFHPSGNYLLTASSDSTLKILD 257
Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 69/200 (34%), Positives = 112/200 (56%)
Query: 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV 85
HT V SV F +G+ L ++S DK +K+W + KF ++S H + +S D RL+V
Sbjct: 102 HTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCARFSPDGRLIV 161
Query: 86 SGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 145
S SDDKT+K+W+ +S +C+ + H +V +F+P I + S D +V++WDVRT +
Sbjct: 162 SASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRL 221
Query: 146 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 205
L+ HS V+A+ F+ G+ ++++S D +I D G+ L TL P + V FS
Sbjct: 222 LQHYQLHSAAVNALSFHPSGNYLLTASSDSTLKILDLMEGRLLYTLHGHQGPATT-VAFS 280
Query: 206 PNGKYILAATLDNTLKLWDS 225
G+Y + D + +W S
Sbjct: 281 RTGEYFASGGSDEQVMVWKS 300
Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 71/201 (35%), Positives = 111/201 (55%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLL 84
GH A++SV FS N + LAS S D + +W +GHK ++ V +S LL
Sbjct: 17 GHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNFSPSGHLL 76
Query: 85 VSGSDDKTLKIWELSSGKCLKTL-KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 143
SGS DKT++IW + + K T+ + H+ V +F +V+ S D++V++W
Sbjct: 77 ASGSRDKTVRIW-IPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQ 135
Query: 144 KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK 203
K L +L H + V F+ DG LIVS+S D ++WD S +C+ + + V++V
Sbjct: 136 KFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGF-VTYVD 194
Query: 204 FSPNGKYILAATLDNTLKLWD 224
F P+G I AA++DNT+K+WD
Sbjct: 195 FHPSGTCIAAASMDNTVKVWD 215
Score = 267 (99.0 bits), Expect = 5.0e-23, P = 5.0e-23
Identities = 61/168 (36%), Positives = 94/168 (55%)
Query: 58 DGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCC 117
D E+ GH+ I+ V +S +++ L SGS D L +W + GH + V C
Sbjct: 8 DPSLERHFKGHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCV 67
Query: 118 NFNPQSNLIVSGSFDESVRIWDVRTGKCLKTL-PAHSDPVSAVHFNRDGSLIVSSSYDGL 176
NF+P +L+ SGS D++VRIW + K T+ AH+ V +VHF DG +V++S D
Sbjct: 68 NFSPSGHLLASGSRDKTVRIW-IPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKT 126
Query: 177 CRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
++W T + L +L N V +FSP+G+ I++A+ D T+KLWD
Sbjct: 127 VKVWSTHRQKFLFSLSQHINW-VRCARFSPDGRLIVSASDDKTVKLWD 173
Score = 218 (81.8 bits), Expect = 1.9e-17, P = 1.9e-17
Identities = 45/160 (28%), Positives = 81/160 (50%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 80
F+L+ H V +FSP+G + S+S DK +K+W + + H ++ V +
Sbjct: 139 FSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPS 198
Query: 81 SRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 140
+ + S D T+K+W++ + + L+ + HS V +F+P N +++ S D +++I D+
Sbjct: 199 GTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLLTASSDSTLKILDL 258
Query: 141 RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 180
G+ L TL H P + V F+R G S D +W
Sbjct: 259 MEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 357 (130.7 bits), Expect = 3.1e-32, P = 3.1e-32
Identities = 74/205 (36%), Positives = 114/205 (55%)
Query: 30 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSD 89
+ SV FSP+G +LA+ + DK +K+W + K + T GH+L I + +SSD R +VSGS
Sbjct: 330 IRSVCFSPDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSG 389
Query: 90 DKTLKIWELSSGKCLKTLK----GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 145
DK KIW++ GKC TL G N V +P L+ +GS D VR+WD +TG
Sbjct: 390 DKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYF 449
Query: 146 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ----CLKTLIDDDNPPVSF 201
L+ H D V +V F+ DG + S S D ++WD + + C T + +S
Sbjct: 450 LERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLS- 508
Query: 202 VKFSPNGKYILAATLDNTLKLWDSK 226
V FSP+G ++++ + D +++ WD +
Sbjct: 509 VAFSPDGSWLISGSKDRSVQFWDPR 533
Score = 295 (108.9 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 69/208 (33%), Positives = 112/208 (53%)
Query: 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK----F-EKTISGHKLGISDVAWSSD 80
H V V FS +G++LA+ ++ +I+ GK F +++ L I V +S D
Sbjct: 280 HNSVVCCVNFSNDGKYLATG-CNRSAQIYDVDTGKKVHAFVDESEKDGDLYIRSVCFSPD 338
Query: 81 SRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 140
L +G++DKT+K+W++ + K T GH ++ +++ IVSGS D+ +IWD+
Sbjct: 339 GNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAKIWDI 398
Query: 141 RTGKCLKTLPAHS-DP---VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 196
GKC TL P V++V + DG L+ + S D + R+WD +G L+ +
Sbjct: 399 EKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERY-EGHL 457
Query: 197 PPVSFVKFSPNGKYILAATLDNTLKLWD 224
V V FSP+GK + + +LD +LKLWD
Sbjct: 458 DSVYSVAFSPDGKSLASGSLDKSLKLWD 485
Score = 292 (107.8 bits), Expect = 4.6e-25, P = 4.6e-25
Identities = 72/216 (33%), Positives = 113/216 (52%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS----GHKLGISD 74
++ T GH + S+ +S +G ++ S S DK KIW GK T+ G K G++
Sbjct: 361 IQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTS 420
Query: 75 VAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 134
VA S D RL+ +GS D +++W+ +G L+ +GH + V+ F+P + SGS D+S
Sbjct: 421 VAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSLASGSLDKS 480
Query: 135 VRIWDV---RT-GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 190
+++WD+ R+ +C T H D V +V F+ DGS ++S S D + WD +G
Sbjct: 481 LKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDPRNGTTHMM 540
Query: 191 LIDDDNPPVSFVKFSP-NGKYILAATL--DNTLKLW 223
L N +S V SP N + + AT D +LW
Sbjct: 541 LQGHKNSVIS-VALSPKNNSHGVFATGSGDFRSRLW 575
Score = 131 (51.2 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 28/82 (34%), Positives = 41/82 (50%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
T GH V SV FSP+G WL S S D+ ++ W +G + GHK + VA S +
Sbjct: 498 TFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDPRNGTTHMMLQGHKNSVISVALSPKN 557
Query: 82 R---LLVSGSDDKTLKIWELSS 100
+ +GS D ++W+ S
Sbjct: 558 NSHGVFATGSGDFRSRLWKYDS 579
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
Identities = 73/205 (35%), Positives = 118/205 (57%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKLGISDVAWSS 79
+ GH AV+ V FSP+G LAS S DK ++IW + K E T+ H + V + S
Sbjct: 55 YRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCS 113
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
D +LLV+ SDDKT+K+W + L +L H N+V C F+P LIVS S D++V++WD
Sbjct: 114 DGQLLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWD 173
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
+ +C+ + H V+ V F+ G+ I ++ D ++WDT + + ++ + V
Sbjct: 174 KTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHY-QLHSAAV 232
Query: 200 SFVKFSPNGKYILAATLDNTLKLWD 224
+ + F P+G Y++ A+ D+TLK+ D
Sbjct: 233 NALSFHPSGNYLITASSDSTLKILD 257
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 65/204 (31%), Positives = 111/204 (54%)
Query: 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV 85
HT V SV F +G+ L ++S DK +K+W + +F +++ H + +S D RL+V
Sbjct: 102 HTATVRSVHFCSDGQLLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIV 161
Query: 86 SGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 145
S SDDKT+K+W+ +S +C+ + H +V +F+P I + D +V++WD RT +
Sbjct: 162 SASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRL 221
Query: 146 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 205
++ HS V+A+ F+ G+ ++++S D +I D G+ L TL P + V FS
Sbjct: 222 VQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATT-VAFS 280
Query: 206 PNGKYILAATLDNTLKLWDSKVVT 229
G+Y + D + +W S T
Sbjct: 281 RTGEYFASGGSDEQVMVWKSNFDT 304
Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 72/203 (35%), Positives = 112/203 (55%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLL 84
GH AV+ V FS N + LAS S D + IW +GHK ++ V +S LL
Sbjct: 17 GHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLL 76
Query: 85 VSGSDDKTLKIWELSSGKCLKTL-KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 143
SGS DKT++IW + + K T+ + H+ V +F L+V+ S D++V++W
Sbjct: 77 ASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQLLVTASDDKTVKVWSTHRQ 135
Query: 144 KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK 203
+ L +L H + V F+ DG LIVS+S D ++WD S +C+ + + V++V
Sbjct: 136 RFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGF-VTYVD 194
Query: 204 FSPNGKYILAATLDNTLKLWDSK 226
F P+G I AA +DNT+K+WD++
Sbjct: 195 FHPSGTCIAAAGMDNTVKVWDTR 217
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 65/168 (38%), Positives = 96/168 (57%)
Query: 58 DGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCC 117
D E+ GH+ ++ V +S +++ L SGS D TL IW + GH + V C
Sbjct: 8 DPSLERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCV 67
Query: 118 NFNPQSNLIVSGSFDESVRIWDVRTGKCLKTL-PAHSDPVSAVHFNRDGSLIVSSSYDGL 176
NF+P +L+ SGS D++VRIW V K T+ AH+ V +VHF DG L+V++S D
Sbjct: 68 NFSPSGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQLLVTASDDKT 126
Query: 177 CRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
++W T + L +L N V KFSP+G+ I++A+ D T+KLWD
Sbjct: 127 VKVWSTHRQRFLFSLTQHINW-VRCAKFSPDGRLIVSASDDKTVKLWD 173
Score = 213 (80.0 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 44/160 (27%), Positives = 78/160 (48%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 80
F+L H V KFSP+G + S+S DK +K+W + + H ++ V +
Sbjct: 139 FSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPS 198
Query: 81 SRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 140
+ + D T+K+W+ + + ++ + HS V +F+P N +++ S D +++I D+
Sbjct: 199 GTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDL 258
Query: 141 RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 180
G+ L TL H P + V F+R G S D +W
Sbjct: 259 MEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 351 (128.6 bits), Expect = 4.7e-32, P = 4.7e-32
Identities = 72/205 (35%), Positives = 117/205 (57%)
Query: 22 TLAGHTKAVSSVKFS-PNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 80
TL GH V ++ F+ P G+ +A+ S DK K+W A GK T GH I ++++
Sbjct: 129 TLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQ 188
Query: 81 SRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 140
S ++ +GS D T K+W++ SG+ + TL GH + +F+ + I++GSFD +V +WD
Sbjct: 189 STVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDA 248
Query: 141 RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 200
TG+ + TL H +S+ F+ D SLI++ S D C +WD SG+C+ TL D+ +
Sbjct: 249 STGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILD 308
Query: 201 FVKFSPNGKYILAATLDNTLKLWDS 225
F GK I A+ D T +++++
Sbjct: 309 SC-FDYTGKLIATASADGTARVYNA 332
Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 65/202 (32%), Positives = 109/202 (53%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GH + S+ F +G+ + + S D + +W A G+ T+ GH IS +S D
Sbjct: 214 TLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDC 273
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
L+++GS DKT +W+ +SGKC+ TL GH + + F+ LI + S D + R+++
Sbjct: 274 SLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNAT 333
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 201
T KC+ L H +S + FN G+ +++ S D RIWD +GQCL+ L + +
Sbjct: 334 TRKCITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQVL-EGHTDEIFS 392
Query: 202 VKFSPNGKYILAATLDNTLKLW 223
F+ G ++ + DN+ ++W
Sbjct: 393 CAFNYKGNIVITGSKDNSCRIW 414
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 64/210 (30%), Positives = 116/210 (55%)
Query: 17 YVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA 76
Y+ K L H +++V + G + S D+ K+W G+ T+ GH+ + +A
Sbjct: 83 YLFK-VLRAHILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIA 141
Query: 77 WSSD-SRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 135
+++ + +GS DKT K+W +GKC T +GH+ + C +FNPQS ++ +GS D +
Sbjct: 142 FNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTA 201
Query: 136 RIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD 195
++WD+++G+ + TL H + ++ F+ G I++ S+D +WD ++G+ + TLI
Sbjct: 202 KLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHC 261
Query: 196 NPPVSFVKFSPNGKYILAATLDNTLKLWDS 225
+S FS + IL ++D T LWD+
Sbjct: 262 -AEISSALFSWDCSLILTGSMDKTCMLWDA 290
Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 61/203 (30%), Positives = 112/203 (55%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
T GHT + + F+P +A+ S D K+W G+ T++GH I +++ +
Sbjct: 172 TFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSG 231
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
+++GS D T+ +W+ S+G+ + TL GH + F+ +LI++GS D++ +WD
Sbjct: 232 DRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDAT 291
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 201
+GKC+ TL H D + F+ G LI ++S DG R+++ + +C+ T ++ +S
Sbjct: 292 SGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKCI-TKLEGHEGEISK 350
Query: 202 VKFSPNGKYILAATLDNTLKLWD 224
+ F+P G +L + D T ++WD
Sbjct: 351 ISFNPQGNRLLTGSSDKTARIWD 373
Score = 158 (60.7 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 44/139 (31%), Positives = 64/139 (46%)
Query: 91 KTLKIWELSSGKCLKTLKGHSNYV---FCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLK 147
K++ + ELS + TL G V + Q L+V E +R K
Sbjct: 28 KSIDLLELSPSTDVNTLVGEIQKVEPLITASRTKQVRLLVQ-RLQEKLRQHCDHNFYLFK 86
Query: 148 TLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPN 207
L AH P++ V N+ GS ++ SYD C++WDTASG+ L TL N + +P
Sbjct: 87 VLRAHILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNPY 146
Query: 208 GKYILAATLDNTLKLWDSK 226
G I + D T KLW ++
Sbjct: 147 GDKIATGSFDKTCKLWSAE 165
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 73/205 (35%), Positives = 116/205 (56%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKLGISDVAWSS 79
+ AGH AV+ V FSP+G LAS S DK ++IW + K E T+ H + V + S
Sbjct: 55 YRFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCS 113
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
D + V+ SDDKT+K+W K L +L H N+V C F+P LIVS S D++V++WD
Sbjct: 114 DGQSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD 173
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
+ +C+ + H V+ V F+ G+ I ++ D ++WD + + L+ + V
Sbjct: 174 KTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHY-QLHSAAV 232
Query: 200 SFVKFSPNGKYILAATLDNTLKLWD 224
+ + F P+G Y++ A+ D+TLK+ D
Sbjct: 233 NALSFHPSGNYLVTASSDSTLKILD 257
Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
Identities = 68/200 (34%), Positives = 110/200 (55%)
Query: 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV 85
HT V SV F +G+ ++S DK +K+W + KF ++S H + +S D RL+V
Sbjct: 102 HTATVRSVHFCSDGQSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIV 161
Query: 86 SGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 145
S SDDKT+K+W+ +S +C+ + H +V +F+P I + D +V++WDVRT +
Sbjct: 162 SASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRL 221
Query: 146 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 205
L+ HS V+A+ F+ G+ +V++S D +I D G+ L TL P + V FS
Sbjct: 222 LQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATT-VAFS 280
Query: 206 PNGKYILAATLDNTLKLWDS 225
G+Y + D + +W S
Sbjct: 281 RTGEYFASGGSDEQVMVWKS 300
Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
Identities = 72/201 (35%), Positives = 109/201 (54%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLL 84
GH AV+SV FS N + LAS S D + +W +GHK ++ V +S LL
Sbjct: 17 GHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFSPSGHLL 76
Query: 85 VSGSDDKTLKIWELSSGKCLKTL-KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 143
SGS DKT++IW + + K T+ + H+ V +F V+ S D++V++W
Sbjct: 77 ASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWSTHRQ 135
Query: 144 KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK 203
K L +L H + V F+ DG LIVS+S D ++WD S +C+ + + V++V
Sbjct: 136 KFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGF-VTYVD 194
Query: 204 FSPNGKYILAATLDNTLKLWD 224
F P+G I AA +DNT+K+WD
Sbjct: 195 FHPSGTCIAAAGMDNTVKVWD 215
Score = 267 (99.0 bits), Expect = 5.1e-23, P = 5.1e-23
Identities = 62/168 (36%), Positives = 93/168 (55%)
Query: 58 DGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCC 117
D E+ GH+ ++ V +S +++ L SGS D L +W + GH + V C
Sbjct: 8 DPSLERHFKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCV 67
Query: 118 NFNPQSNLIVSGSFDESVRIWDVRTGKCLKTL-PAHSDPVSAVHFNRDGSLIVSSSYDGL 176
NF+P +L+ SGS D++VRIW V K T+ AH+ V +VHF DG V++S D
Sbjct: 68 NFSPSGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKT 126
Query: 177 CRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
++W T + L +L N V KFSP+G+ I++A+ D T+KLWD
Sbjct: 127 VKVWSTHRQKFLFSLSQHINW-VRCAKFSPDGRLIVSASDDKTVKLWD 173
Score = 220 (82.5 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 46/160 (28%), Positives = 80/160 (50%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 80
F+L+ H V KFSP+G + S+S DK +K+W + + H ++ V +
Sbjct: 139 FSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPS 198
Query: 81 SRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 140
+ + D T+K+W++ + + L+ + HS V +F+P N +V+ S D +++I D+
Sbjct: 199 GTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDL 258
Query: 141 RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 180
G+ L TL H P + V F+R G S D +W
Sbjct: 259 MEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 71/204 (34%), Positives = 113/204 (55%)
Query: 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 79
K+ L+GH V+ V F P + S+S D IK+W G FE+T+ GH + D+++
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
+LL S S D T+K+W+ +C++T+ GH + V P + IVS S D+++++W+
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
V+TG C+KT H + V V N+DG+LI S S D R+W A+ +C L + ++ V
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHV-V 279
Query: 200 SFVKFSPNGKY--ILAATLDNTLK 221
+ ++P Y I AT T K
Sbjct: 280 ECISWAPESSYSSISEATGSETKK 303
Score = 247 (92.0 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 51/163 (31%), Positives = 94/163 (57%)
Query: 62 EK-TISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFN 120
EK +SGH+ ++ V + ++VS S+D T+K+W+ +G +TLKGH++ V +F+
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD 159
Query: 121 PQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 180
L+ S S D ++++WD + +C++T+ H VS+V +G IVS+S D ++W
Sbjct: 160 HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMW 219
Query: 181 DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 223
+ +G C+KT V V+ + +G I + + D T+++W
Sbjct: 220 EVQTGYCVKTFTGH-REWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 218 (81.8 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 42/118 (35%), Positives = 70/118 (59%)
Query: 107 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGS 166
L GH + V F+P +++VS S D ++++WD TG +TL H+D V + F+ G
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 167 LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
L+ S S D ++WD +C++T+ D+ VS V PNG +I++A+ D T+K+W+
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHN-VSSVAIMPNGDHIVSASRDKTIKMWE 220
Score = 216 (81.1 bits), Expect = 3.3e-17, P = 3.3e-17
Identities = 38/98 (38%), Positives = 65/98 (66%)
Query: 84 LVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 143
L+SGS DKT+K+W++S+G CL TL GH N+V F+ I+S + D+++R+WD +
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 144 KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181
+C+KTL AH V+++ F++ +V+ S D ++W+
Sbjct: 371 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 206 (77.6 bits), Expect = 4.3e-16, P = 4.3e-16
Identities = 36/103 (34%), Positives = 63/103 (61%)
Query: 39 GEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWEL 98
G +L S S DK IK+W G T+ GH + V + S + ++S +DDKTL++W+
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 99 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
+ +C+KTL H ++V +F+ + +V+GS D++V++W+ R
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 187 (70.9 bits), Expect = 5.3e-14, P = 5.3e-14
Identities = 35/101 (34%), Positives = 62/101 (61%)
Query: 126 IVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 185
++SGS D+++++WDV TG CL TL H + V V F+ G I+S + D R+WD +
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 186 QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSK 226
+C+KTL ++ V+ + F Y++ ++D T+K+W+ +
Sbjct: 371 RCMKTLNAHEHF-VTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 129 (50.5 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 26/64 (40%), Positives = 38/64 (59%)
Query: 163 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 222
+ G ++S S D ++WD ++G CL TL+ DN V V F GK+IL+ D TL++
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW-VRGVLFHSGGKFILSCADDKTLRV 364
Query: 223 WDSK 226
WD K
Sbjct: 365 WDYK 368
Score = 125 (49.1 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 23/76 (30%), Positives = 45/76 (59%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GH V V F G+++ S + DK +++W + + KT++ H+ ++ + + +
Sbjct: 333 TLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTA 392
Query: 82 RLLVSGSDDKTLKIWE 97
+V+GS D+T+K+WE
Sbjct: 393 PYVVTGSVDQTVKVWE 408
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 71/204 (34%), Positives = 113/204 (55%)
Query: 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 79
K+ L+GH V+ V F P + S+S D IK+W G FE+T+ GH + D+++
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDH 160
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
+LL S S D T+K+W+ +C++T+ GH + V P + IVS S D+++++W+
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
V+TG C+KT H + V V N+DG+LI S S D R+W A+ +C L + ++ V
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHV-V 279
Query: 200 SFVKFSPNGKY--ILAATLDNTLK 221
+ ++P Y I AT T K
Sbjct: 280 ECISWAPESSYSSISEATGSETKK 303
Score = 247 (92.0 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 51/163 (31%), Positives = 94/163 (57%)
Query: 62 EK-TISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFN 120
EK +SGH+ ++ V + ++VS S+D T+K+W+ +G +TLKGH++ V +F+
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFD 159
Query: 121 PQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 180
L+ S S D ++++WD + +C++T+ H VS+V +G IVS+S D ++W
Sbjct: 160 HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMW 219
Query: 181 DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 223
+ +G C+KT V V+ + +G I + + D T+++W
Sbjct: 220 EVQTGYCVKTFTGH-REWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 218 (81.8 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 42/118 (35%), Positives = 70/118 (59%)
Query: 107 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGS 166
L GH + V F+P +++VS S D ++++WD TG +TL H+D V + F+ G
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGK 163
Query: 167 LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
L+ S S D ++WD +C++T+ D+ VS V PNG +I++A+ D T+K+W+
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHN-VSSVAIMPNGDHIVSASRDKTIKMWE 220
Score = 216 (81.1 bits), Expect = 3.3e-17, P = 3.3e-17
Identities = 38/98 (38%), Positives = 65/98 (66%)
Query: 84 LVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 143
L+SGS DKT+K+W++S+G CL TL GH N+V F+ I+S + D+++R+WD +
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 144 KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181
+C+KTL AH V+++ F++ +V+ S D ++W+
Sbjct: 371 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 206 (77.6 bits), Expect = 4.3e-16, P = 4.3e-16
Identities = 36/103 (34%), Positives = 63/103 (61%)
Query: 39 GEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWEL 98
G +L S S DK IK+W G T+ GH + V + S + ++S +DDKTL++W+
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 99 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
+ +C+KTL H ++V +F+ + +V+GS D++V++W+ R
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 187 (70.9 bits), Expect = 5.3e-14, P = 5.3e-14
Identities = 35/101 (34%), Positives = 62/101 (61%)
Query: 126 IVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 185
++SGS D+++++WDV TG CL TL H + V V F+ G I+S + D R+WD +
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 186 QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSK 226
+C+KTL ++ V+ + F Y++ ++D T+K+W+ +
Sbjct: 371 RCMKTLNAHEHF-VTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 129 (50.5 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 26/64 (40%), Positives = 38/64 (59%)
Query: 163 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 222
+ G ++S S D ++WD ++G CL TL+ DN V V F GK+IL+ D TL++
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW-VRGVLFHSGGKFILSCADDKTLRV 364
Query: 223 WDSK 226
WD K
Sbjct: 365 WDYK 368
Score = 125 (49.1 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 23/76 (30%), Positives = 45/76 (59%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GH V V F G+++ S + DK +++W + + KT++ H+ ++ + + +
Sbjct: 333 TLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTA 392
Query: 82 RLLVSGSDDKTLKIWE 97
+V+GS D+T+K+WE
Sbjct: 393 PYVVTGSVDQTVKVWE 408
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 71/204 (34%), Positives = 113/204 (55%)
Query: 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 79
K+ L+GH V+ V F P + S+S D IK+W G FE+T+ GH + D+++
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
+LL S S D T+K+W+ +C++T+ GH + V P + IVS S D+++++W+
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
V+TG C+KT H + V V N+DG+LI S S D R+W A+ +C L + ++ V
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHV-V 279
Query: 200 SFVKFSPNGKY--ILAATLDNTLK 221
+ ++P Y I AT T K
Sbjct: 280 ECISWAPESSYSSISEATGSETKK 303
Score = 247 (92.0 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 51/163 (31%), Positives = 94/163 (57%)
Query: 62 EK-TISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFN 120
EK +SGH+ ++ V + ++VS S+D T+K+W+ +G +TLKGH++ V +F+
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD 159
Query: 121 PQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 180
L+ S S D ++++WD + +C++T+ H VS+V +G IVS+S D ++W
Sbjct: 160 HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMW 219
Query: 181 DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 223
+ +G C+KT V V+ + +G I + + D T+++W
Sbjct: 220 EVQTGYCVKTFTGH-REWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 218 (81.8 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 42/118 (35%), Positives = 70/118 (59%)
Query: 107 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGS 166
L GH + V F+P +++VS S D ++++WD TG +TL H+D V + F+ G
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 167 LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
L+ S S D ++WD +C++T+ D+ VS V PNG +I++A+ D T+K+W+
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHN-VSSVAIMPNGDHIVSASRDKTIKMWE 220
Score = 216 (81.1 bits), Expect = 3.3e-17, P = 3.3e-17
Identities = 38/98 (38%), Positives = 65/98 (66%)
Query: 84 LVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 143
L+SGS DKT+K+W++S+G CL TL GH N+V F+ I+S + D+++R+WD +
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 144 KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181
+C+KTL AH V+++ F++ +V+ S D ++W+
Sbjct: 371 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 206 (77.6 bits), Expect = 4.3e-16, P = 4.3e-16
Identities = 36/103 (34%), Positives = 63/103 (61%)
Query: 39 GEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWEL 98
G +L S S DK IK+W G T+ GH + V + S + ++S +DDKTL++W+
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 99 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
+ +C+KTL H ++V +F+ + +V+GS D++V++W+ R
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 187 (70.9 bits), Expect = 5.3e-14, P = 5.3e-14
Identities = 35/101 (34%), Positives = 62/101 (61%)
Query: 126 IVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 185
++SGS D+++++WDV TG CL TL H + V V F+ G I+S + D R+WD +
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 186 QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSK 226
+C+KTL ++ V+ + F Y++ ++D T+K+W+ +
Sbjct: 371 RCMKTLNAHEHF-VTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 129 (50.5 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 26/64 (40%), Positives = 38/64 (59%)
Query: 163 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 222
+ G ++S S D ++WD ++G CL TL+ DN V V F GK+IL+ D TL++
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW-VRGVLFHSGGKFILSCADDKTLRV 364
Query: 223 WDSK 226
WD K
Sbjct: 365 WDYK 368
Score = 125 (49.1 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 23/76 (30%), Positives = 45/76 (59%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GH V V F G+++ S + DK +++W + + KT++ H+ ++ + + +
Sbjct: 333 TLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTA 392
Query: 82 RLLVSGSDDKTLKIWE 97
+V+GS D+T+K+WE
Sbjct: 393 PYVVTGSVDQTVKVWE 408
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 71/204 (34%), Positives = 113/204 (55%)
Query: 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 79
K+ L+GH V+ V F P + S+S D IK+W G FE+T+ GH + D+++
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
+LL S S D T+K+W+ +C++T+ GH + V P + IVS S D+++++W+
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
V+TG C+KT H + V V N+DG+LI S S D R+W A+ +C L + ++ V
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHV-V 279
Query: 200 SFVKFSPNGKY--ILAATLDNTLK 221
+ ++P Y I AT T K
Sbjct: 280 ECISWAPESSYSSISEATGSETKK 303
Score = 247 (92.0 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 51/163 (31%), Positives = 94/163 (57%)
Query: 62 EK-TISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFN 120
EK +SGH+ ++ V + ++VS S+D T+K+W+ +G +TLKGH++ V +F+
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD 159
Query: 121 PQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 180
L+ S S D ++++WD + +C++T+ H VS+V +G IVS+S D ++W
Sbjct: 160 HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMW 219
Query: 181 DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 223
+ +G C+KT V V+ + +G I + + D T+++W
Sbjct: 220 EVQTGYCVKTFTGH-REWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 218 (81.8 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 42/118 (35%), Positives = 70/118 (59%)
Query: 107 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGS 166
L GH + V F+P +++VS S D ++++WD TG +TL H+D V + F+ G
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 167 LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
L+ S S D ++WD +C++T+ D+ VS V PNG +I++A+ D T+K+W+
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHN-VSSVAIMPNGDHIVSASRDKTIKMWE 220
Score = 216 (81.1 bits), Expect = 3.3e-17, P = 3.3e-17
Identities = 38/98 (38%), Positives = 65/98 (66%)
Query: 84 LVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 143
L+SGS DKT+K+W++S+G CL TL GH N+V F+ I+S + D+++R+WD +
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 144 KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181
+C+KTL AH V+++ F++ +V+ S D ++W+
Sbjct: 371 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 206 (77.6 bits), Expect = 4.3e-16, P = 4.3e-16
Identities = 36/103 (34%), Positives = 63/103 (61%)
Query: 39 GEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWEL 98
G +L S S DK IK+W G T+ GH + V + S + ++S +DDKTL++W+
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 99 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
+ +C+KTL H ++V +F+ + +V+GS D++V++W+ R
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 187 (70.9 bits), Expect = 5.3e-14, P = 5.3e-14
Identities = 35/101 (34%), Positives = 62/101 (61%)
Query: 126 IVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 185
++SGS D+++++WDV TG CL TL H + V V F+ G I+S + D R+WD +
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 186 QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSK 226
+C+KTL ++ V+ + F Y++ ++D T+K+W+ +
Sbjct: 371 RCMKTLNAHEHF-VTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 129 (50.5 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 26/64 (40%), Positives = 38/64 (59%)
Query: 163 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 222
+ G ++S S D ++WD ++G CL TL+ DN V V F GK+IL+ D TL++
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW-VRGVLFHSGGKFILSCADDKTLRV 364
Query: 223 WDSK 226
WD K
Sbjct: 365 WDYK 368
Score = 125 (49.1 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 23/76 (30%), Positives = 45/76 (59%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GH V V F G+++ S + DK +++W + + KT++ H+ ++ + + +
Sbjct: 333 TLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTA 392
Query: 82 RLLVSGSDDKTLKIWE 97
+V+GS D+T+K+WE
Sbjct: 393 PYVVTGSVDQTVKVWE 408
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 71/204 (34%), Positives = 113/204 (55%)
Query: 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 79
K+ L+GH V+ V F P + S+S D IK+W G FE+T+ GH + D+++
Sbjct: 36 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 95
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
+LL S S D T+K+W+ +C++T+ GH + V P + IVS S D+++++W+
Sbjct: 96 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 155
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
V+TG C+KT H + V V N+DG+LI S S D R+W A+ +C L + ++ V
Sbjct: 156 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHV-V 214
Query: 200 SFVKFSPNGKY--ILAATLDNTLK 221
+ ++P Y I AT T K
Sbjct: 215 ECISWAPESSYSSISEATGSETKK 238
Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 51/163 (31%), Positives = 94/163 (57%)
Query: 62 EK-TISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFN 120
EK +SGH+ ++ V + ++VS S+D T+K+W+ +G +TLKGH++ V +F+
Sbjct: 35 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD 94
Query: 121 PQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 180
L+ S S D ++++WD + +C++T+ H VS+V +G IVS+S D ++W
Sbjct: 95 HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMW 154
Query: 181 DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 223
+ +G C+KT V V+ + +G I + + D T+++W
Sbjct: 155 EVQTGYCVKTFTGH-REWVRMVRPNQDGTLIASCSNDQTVRVW 196
Score = 218 (81.8 bits), Expect = 8.6e-18, P = 8.6e-18
Identities = 42/118 (35%), Positives = 70/118 (59%)
Query: 107 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGS 166
L GH + V F+P +++VS S D ++++WD TG +TL H+D V + F+ G
Sbjct: 39 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 98
Query: 167 LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
L+ S S D ++WD +C++T+ D+ VS V PNG +I++A+ D T+K+W+
Sbjct: 99 LLASCSADMTIKLWDFQGFECIRTMHGHDHN-VSSVAIMPNGDHIVSASRDKTIKMWE 155
Score = 216 (81.1 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 38/98 (38%), Positives = 65/98 (66%)
Query: 84 LVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 143
L+SGS DKT+K+W++S+G CL TL GH N+V F+ I+S + D+++R+WD +
Sbjct: 246 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 305
Query: 144 KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181
+C+KTL AH V+++ F++ +V+ S D ++W+
Sbjct: 306 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 343
Score = 206 (77.6 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 36/103 (34%), Positives = 63/103 (61%)
Query: 39 GEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWEL 98
G +L S S DK IK+W G T+ GH + V + S + ++S +DDKTL++W+
Sbjct: 243 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 302
Query: 99 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
+ +C+KTL H ++V +F+ + +V+GS D++V++W+ R
Sbjct: 303 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 345
Score = 187 (70.9 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 35/101 (34%), Positives = 62/101 (61%)
Query: 126 IVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 185
++SGS D+++++WDV TG CL TL H + V V F+ G I+S + D R+WD +
Sbjct: 246 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 305
Query: 186 QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSK 226
+C+KTL ++ V+ + F Y++ ++D T+K+W+ +
Sbjct: 306 RCMKTLNAHEHF-VTSLDFHKTAPYVVTGSVDQTVKVWECR 345
Score = 129 (50.5 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 26/64 (40%), Positives = 38/64 (59%)
Query: 163 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 222
+ G ++S S D ++WD ++G CL TL+ DN V V F GK+IL+ D TL++
Sbjct: 241 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW-VRGVLFHSGGKFILSCADDKTLRV 299
Query: 223 WDSK 226
WD K
Sbjct: 300 WDYK 303
Score = 125 (49.1 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 23/76 (30%), Positives = 45/76 (59%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GH V V F G+++ S + DK +++W + + KT++ H+ ++ + + +
Sbjct: 268 TLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTA 327
Query: 82 RLLVSGSDDKTLKIWE 97
+V+GS D+T+K+WE
Sbjct: 328 PYVVTGSVDQTVKVWE 343
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 71/204 (34%), Positives = 113/204 (55%)
Query: 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 79
K+ L+GH V+ V F P + S+S D IK+W G FE+T+ GH + D+++
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
+LL S S D T+K+W+ +C++T+ GH + V P + IVS S D+++++W+
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
V+TG C+KT H + V V N+DG+LI S S D R+W A+ +C L + ++ V
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHV-V 279
Query: 200 SFVKFSPNGKY--ILAATLDNTLK 221
+ ++P Y I AT T K
Sbjct: 280 ECISWAPESSYSSISEATGSETKK 303
Score = 247 (92.0 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 51/163 (31%), Positives = 94/163 (57%)
Query: 62 EK-TISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFN 120
EK +SGH+ ++ V + ++VS S+D T+K+W+ +G +TLKGH++ V +F+
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD 159
Query: 121 PQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 180
L+ S S D ++++WD + +C++T+ H VS+V +G IVS+S D ++W
Sbjct: 160 HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMW 219
Query: 181 DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 223
+ +G C+KT V V+ + +G I + + D T+++W
Sbjct: 220 EVQTGYCVKTFTGH-REWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 218 (81.8 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 42/118 (35%), Positives = 70/118 (59%)
Query: 107 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGS 166
L GH + V F+P +++VS S D ++++WD TG +TL H+D V + F+ G
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 167 LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
L+ S S D ++WD +C++T+ D+ VS V PNG +I++A+ D T+K+W+
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHN-VSSVAIMPNGDHIVSASRDKTIKMWE 220
Score = 216 (81.1 bits), Expect = 3.3e-17, P = 3.3e-17
Identities = 38/98 (38%), Positives = 65/98 (66%)
Query: 84 LVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 143
L+SGS DKT+K+W++S+G CL TL GH N+V F+ I+S + D+++R+WD +
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 144 KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181
+C+KTL AH V+++ F++ +V+ S D ++W+
Sbjct: 371 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 206 (77.6 bits), Expect = 4.3e-16, P = 4.3e-16
Identities = 36/103 (34%), Positives = 63/103 (61%)
Query: 39 GEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWEL 98
G +L S S DK IK+W G T+ GH + V + S + ++S +DDKTL++W+
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 99 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
+ +C+KTL H ++V +F+ + +V+GS D++V++W+ R
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 187 (70.9 bits), Expect = 5.3e-14, P = 5.3e-14
Identities = 35/101 (34%), Positives = 62/101 (61%)
Query: 126 IVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 185
++SGS D+++++WDV TG CL TL H + V V F+ G I+S + D R+WD +
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 186 QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSK 226
+C+KTL ++ V+ + F Y++ ++D T+K+W+ +
Sbjct: 371 RCMKTLNAHEHF-VTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 129 (50.5 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 26/64 (40%), Positives = 38/64 (59%)
Query: 163 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 222
+ G ++S S D ++WD ++G CL TL+ DN V V F GK+IL+ D TL++
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW-VRGVLFHSGGKFILSCADDKTLRV 364
Query: 223 WDSK 226
WD K
Sbjct: 365 WDYK 368
Score = 125 (49.1 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 23/76 (30%), Positives = 45/76 (59%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GH V V F G+++ S + DK +++W + + KT++ H+ ++ + + +
Sbjct: 333 TLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTA 392
Query: 82 RLLVSGSDDKTLKIWE 97
+V+GS D+T+K+WE
Sbjct: 393 PYVVTGSVDQTVKVWE 408
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 71/204 (34%), Positives = 113/204 (55%)
Query: 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 79
K+ L+GH V+ V F P + S+S D IK+W G FE+T+ GH + D+++
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
+LL S S D T+K+W+ +C++T+ GH + V P + IVS S D+++++W+
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
V+TG C+KT H + V V N+DG+LI S S D R+W A+ +C L + ++ V
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHV-V 279
Query: 200 SFVKFSPNGKY--ILAATLDNTLK 221
+ ++P Y I AT T K
Sbjct: 280 ECISWAPESSYSSISEATGSETKK 303
Score = 247 (92.0 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 51/163 (31%), Positives = 94/163 (57%)
Query: 62 EK-TISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFN 120
EK +SGH+ ++ V + ++VS S+D T+K+W+ +G +TLKGH++ V +F+
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD 159
Query: 121 PQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 180
L+ S S D ++++WD + +C++T+ H VS+V +G IVS+S D ++W
Sbjct: 160 HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMW 219
Query: 181 DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 223
+ +G C+KT V V+ + +G I + + D T+++W
Sbjct: 220 EVQTGYCVKTFTGH-REWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 218 (81.8 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 42/118 (35%), Positives = 70/118 (59%)
Query: 107 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGS 166
L GH + V F+P +++VS S D ++++WD TG +TL H+D V + F+ G
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 167 LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
L+ S S D ++WD +C++T+ D+ VS V PNG +I++A+ D T+K+W+
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHN-VSSVAIMPNGDHIVSASRDKTIKMWE 220
Score = 216 (81.1 bits), Expect = 3.3e-17, P = 3.3e-17
Identities = 38/98 (38%), Positives = 65/98 (66%)
Query: 84 LVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 143
L+SGS DKT+K+W++S+G CL TL GH N+V F+ I+S + D+++R+WD +
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 144 KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181
+C+KTL AH V+++ F++ +V+ S D ++W+
Sbjct: 371 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 206 (77.6 bits), Expect = 4.3e-16, P = 4.3e-16
Identities = 36/103 (34%), Positives = 63/103 (61%)
Query: 39 GEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWEL 98
G +L S S DK IK+W G T+ GH + V + S + ++S +DDKTL++W+
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 99 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
+ +C+KTL H ++V +F+ + +V+GS D++V++W+ R
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 187 (70.9 bits), Expect = 5.3e-14, P = 5.3e-14
Identities = 35/101 (34%), Positives = 62/101 (61%)
Query: 126 IVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 185
++SGS D+++++WDV TG CL TL H + V V F+ G I+S + D R+WD +
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 186 QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSK 226
+C+KTL ++ V+ + F Y++ ++D T+K+W+ +
Sbjct: 371 RCMKTLNAHEHF-VTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 129 (50.5 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 26/64 (40%), Positives = 38/64 (59%)
Query: 163 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 222
+ G ++S S D ++WD ++G CL TL+ DN V V F GK+IL+ D TL++
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW-VRGVLFHSGGKFILSCADDKTLRV 364
Query: 223 WDSK 226
WD K
Sbjct: 365 WDYK 368
Score = 125 (49.1 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 23/76 (30%), Positives = 45/76 (59%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GH V V F G+++ S + DK +++W + + KT++ H+ ++ + + +
Sbjct: 333 TLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTA 392
Query: 82 RLLVSGSDDKTLKIWE 97
+V+GS D+T+K+WE
Sbjct: 393 PYVVTGSVDQTVKVWE 408
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 71/204 (34%), Positives = 113/204 (55%)
Query: 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 79
K+ L+GH V+ V F P + S+S D IK+W G FE+T+ GH + D+++
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
+LL S S D T+K+W+ +C++T+ GH + V P + IVS S D+++++W+
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
V+TG C+KT H + V V N+DG+LI S S D R+W A+ +C L + ++ V
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHV-V 279
Query: 200 SFVKFSPNGKY--ILAATLDNTLK 221
+ ++P Y I AT T K
Sbjct: 280 ECISWAPESSYSSISEATGSETKK 303
Score = 247 (92.0 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 51/163 (31%), Positives = 94/163 (57%)
Query: 62 EK-TISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFN 120
EK +SGH+ ++ V + ++VS S+D T+K+W+ +G +TLKGH++ V +F+
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD 159
Query: 121 PQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 180
L+ S S D ++++WD + +C++T+ H VS+V +G IVS+S D ++W
Sbjct: 160 HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMW 219
Query: 181 DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 223
+ +G C+KT V V+ + +G I + + D T+++W
Sbjct: 220 EVQTGYCVKTFTGH-REWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 218 (81.8 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 42/118 (35%), Positives = 70/118 (59%)
Query: 107 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGS 166
L GH + V F+P +++VS S D ++++WD TG +TL H+D V + F+ G
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 167 LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
L+ S S D ++WD +C++T+ D+ VS V PNG +I++A+ D T+K+W+
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHN-VSSVAIMPNGDHIVSASRDKTIKMWE 220
Score = 216 (81.1 bits), Expect = 3.3e-17, P = 3.3e-17
Identities = 38/98 (38%), Positives = 65/98 (66%)
Query: 84 LVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 143
L+SGS DKT+K+W++S+G CL TL GH N+V F+ I+S + D+++R+WD +
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 144 KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181
+C+KTL AH V+++ F++ +V+ S D ++W+
Sbjct: 371 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 206 (77.6 bits), Expect = 4.3e-16, P = 4.3e-16
Identities = 36/103 (34%), Positives = 63/103 (61%)
Query: 39 GEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWEL 98
G +L S S DK IK+W G T+ GH + V + S + ++S +DDKTL++W+
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 99 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
+ +C+KTL H ++V +F+ + +V+GS D++V++W+ R
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 187 (70.9 bits), Expect = 5.3e-14, P = 5.3e-14
Identities = 35/101 (34%), Positives = 62/101 (61%)
Query: 126 IVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 185
++SGS D+++++WDV TG CL TL H + V V F+ G I+S + D R+WD +
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 186 QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSK 226
+C+KTL ++ V+ + F Y++ ++D T+K+W+ +
Sbjct: 371 RCMKTLNAHEHF-VTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 129 (50.5 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 26/64 (40%), Positives = 38/64 (59%)
Query: 163 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 222
+ G ++S S D ++WD ++G CL TL+ DN V V F GK+IL+ D TL++
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW-VRGVLFHSGGKFILSCADDKTLRV 364
Query: 223 WDSK 226
WD K
Sbjct: 365 WDYK 368
Score = 125 (49.1 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 23/76 (30%), Positives = 45/76 (59%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GH V V F G+++ S + DK +++W + + KT++ H+ ++ + + +
Sbjct: 333 TLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTA 392
Query: 82 RLLVSGSDDKTLKIWE 97
+V+GS D+T+K+WE
Sbjct: 393 PYVVTGSVDQTVKVWE 408
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 71/204 (34%), Positives = 113/204 (55%)
Query: 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 79
K+ L+GH V+ V F P + S+S D IK+W G FE+T+ GH + D+++
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
+LL S S D T+K+W+ +C++T+ GH + V P + IVS S D+++++W+
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
V+TG C+KT H + V V N+DG+LI S S D R+W A+ +C L + ++ V
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHV-V 279
Query: 200 SFVKFSPNGKY--ILAATLDNTLK 221
+ ++P Y I AT T K
Sbjct: 280 ECISWAPESSYSSISEATGSETKK 303
Score = 247 (92.0 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 51/163 (31%), Positives = 94/163 (57%)
Query: 62 EK-TISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFN 120
EK +SGH+ ++ V + ++VS S+D T+K+W+ +G +TLKGH++ V +F+
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD 159
Query: 121 PQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 180
L+ S S D ++++WD + +C++T+ H VS+V +G IVS+S D ++W
Sbjct: 160 HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMW 219
Query: 181 DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 223
+ +G C+KT V V+ + +G I + + D T+++W
Sbjct: 220 EVQTGYCVKTFTGH-REWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 218 (81.8 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 42/118 (35%), Positives = 70/118 (59%)
Query: 107 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGS 166
L GH + V F+P +++VS S D ++++WD TG +TL H+D V + F+ G
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 167 LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
L+ S S D ++WD +C++T+ D+ VS V PNG +I++A+ D T+K+W+
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHN-VSSVAIMPNGDHIVSASRDKTIKMWE 220
Score = 216 (81.1 bits), Expect = 3.3e-17, P = 3.3e-17
Identities = 38/98 (38%), Positives = 65/98 (66%)
Query: 84 LVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 143
L+SGS DKT+K+W++S+G CL TL GH N+V F+ I+S + D+++R+WD +
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 144 KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181
+C+KTL AH V+++ F++ +V+ S D ++W+
Sbjct: 371 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 206 (77.6 bits), Expect = 4.3e-16, P = 4.3e-16
Identities = 36/103 (34%), Positives = 63/103 (61%)
Query: 39 GEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWEL 98
G +L S S DK IK+W G T+ GH + V + S + ++S +DDKTL++W+
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 99 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
+ +C+KTL H ++V +F+ + +V+GS D++V++W+ R
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 187 (70.9 bits), Expect = 5.3e-14, P = 5.3e-14
Identities = 35/101 (34%), Positives = 62/101 (61%)
Query: 126 IVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 185
++SGS D+++++WDV TG CL TL H + V V F+ G I+S + D R+WD +
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 186 QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSK 226
+C+KTL ++ V+ + F Y++ ++D T+K+W+ +
Sbjct: 371 RCMKTLNAHEHF-VTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 129 (50.5 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 26/64 (40%), Positives = 38/64 (59%)
Query: 163 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 222
+ G ++S S D ++WD ++G CL TL+ DN V V F GK+IL+ D TL++
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW-VRGVLFHSGGKFILSCADDKTLRV 364
Query: 223 WDSK 226
WD K
Sbjct: 365 WDYK 368
Score = 125 (49.1 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 23/76 (30%), Positives = 45/76 (59%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GH V V F G+++ S + DK +++W + + KT++ H+ ++ + + +
Sbjct: 333 TLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTA 392
Query: 82 RLLVSGSDDKTLKIWE 97
+V+GS D+T+K+WE
Sbjct: 393 PYVVTGSVDQTVKVWE 408
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 71/204 (34%), Positives = 113/204 (55%)
Query: 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 79
K+ L+GH V+ V F P + S+S D IK+W G FE+T+ GH + D+++
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
+LL S S D T+K+W+ +C++T+ GH + V P + IVS S D+++++W+
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
V+TG C+KT H + V V N+DG+LI S S D R+W A+ +C L + ++ V
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHV-V 279
Query: 200 SFVKFSPNGKY--ILAATLDNTLK 221
+ ++P Y I AT T K
Sbjct: 280 ECISWAPESSYSSISEATGSETKK 303
Score = 247 (92.0 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 51/163 (31%), Positives = 94/163 (57%)
Query: 62 EK-TISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFN 120
EK +SGH+ ++ V + ++VS S+D T+K+W+ +G +TLKGH++ V +F+
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD 159
Query: 121 PQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 180
L+ S S D ++++WD + +C++T+ H VS+V +G IVS+S D ++W
Sbjct: 160 HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMW 219
Query: 181 DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 223
+ +G C+KT V V+ + +G I + + D T+++W
Sbjct: 220 EVQTGYCVKTFTGH-REWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 218 (81.8 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 42/118 (35%), Positives = 70/118 (59%)
Query: 107 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGS 166
L GH + V F+P +++VS S D ++++WD TG +TL H+D V + F+ G
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 167 LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
L+ S S D ++WD +C++T+ D+ VS V PNG +I++A+ D T+K+W+
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHN-VSSVAIMPNGDHIVSASRDKTIKMWE 220
Score = 216 (81.1 bits), Expect = 3.3e-17, P = 3.3e-17
Identities = 38/98 (38%), Positives = 65/98 (66%)
Query: 84 LVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 143
L+SGS DKT+K+W++S+G CL TL GH N+V F+ I+S + D+++R+WD +
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 144 KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181
+C+KTL AH V+++ F++ +V+ S D ++W+
Sbjct: 371 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 206 (77.6 bits), Expect = 4.3e-16, P = 4.3e-16
Identities = 36/103 (34%), Positives = 63/103 (61%)
Query: 39 GEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWEL 98
G +L S S DK IK+W G T+ GH + V + S + ++S +DDKTL++W+
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 99 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
+ +C+KTL H ++V +F+ + +V+GS D++V++W+ R
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 187 (70.9 bits), Expect = 5.3e-14, P = 5.3e-14
Identities = 35/101 (34%), Positives = 62/101 (61%)
Query: 126 IVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 185
++SGS D+++++WDV TG CL TL H + V V F+ G I+S + D R+WD +
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 186 QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSK 226
+C+KTL ++ V+ + F Y++ ++D T+K+W+ +
Sbjct: 371 RCMKTLNAHEHF-VTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 129 (50.5 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 26/64 (40%), Positives = 38/64 (59%)
Query: 163 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 222
+ G ++S S D ++WD ++G CL TL+ DN V V F GK+IL+ D TL++
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW-VRGVLFHSGGKFILSCADDKTLRV 364
Query: 223 WDSK 226
WD K
Sbjct: 365 WDYK 368
Score = 125 (49.1 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 23/76 (30%), Positives = 45/76 (59%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GH V V F G+++ S + DK +++W + + KT++ H+ ++ + + +
Sbjct: 333 TLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTA 392
Query: 82 RLLVSGSDDKTLKIWE 97
+V+GS D+T+K+WE
Sbjct: 393 PYVVTGSVDQTVKVWE 408
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 73/214 (34%), Positives = 117/214 (54%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY-DGKFEKTISGHKLGISDVAWSSDS 81
L+GH AV ++KF+P G +AS S D+ I +W + D K + GHK I D+ W+SD
Sbjct: 49 LSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDG 108
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYV-FCCNFNPQSNLIVSGSFDESVRIWDV 140
+VS S DKT++ W++ +GK +K + HS++V CC LI+SGS D + ++WD+
Sbjct: 109 SQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDM 168
Query: 141 RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 200
R ++T P ++AV F+ I + D ++WD G+ TL + ++
Sbjct: 169 RQRGAIQTFPDKYQ-ITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTL-EGHQDTIT 226
Query: 201 FVKFSPNGKYILAATLDNTLKLWDSKVVTPAIIC 234
+ SP+G Y+L +DN L +WD + P C
Sbjct: 227 GMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRC 260
Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 56/212 (26%), Positives = 107/212 (50%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
L GH A+ + ++ +G + S+S DK ++ W GK K ++ H ++ +
Sbjct: 92 LKGHKNAILDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGP 151
Query: 83 -LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
L++SGSDD T K+W++ ++T + +F+ ++ I +G D V++WD+R
Sbjct: 152 PLIISGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDAADKIFTGGVDNDVKVWDLR 210
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LCRIWD----TASGQCLKTLIDDD- 195
G+ TL H D ++ + + DGS ++++ D LC +WD +C+K
Sbjct: 211 KGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLC-VWDMRPYAPQNRCVKIFEGHQH 269
Query: 196 NPPVSFVK--FSPNGKYILAATLDNTLKLWDS 225
N + +K +SP+G + A + D + +WD+
Sbjct: 270 NFEKNLLKCSWSPDGTKVTAGSSDRMVHIWDT 301
Score = 186 (70.5 bits), Expect = 3.9e-14, P = 3.9e-14
Identities = 44/154 (28%), Positives = 80/154 (51%)
Query: 30 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD-SRLLVSGS 88
+++V FS + + + D +K+W G+ T+ GH+ I+ ++ S D S LL +G
Sbjct: 183 ITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGM 242
Query: 89 DDKTLKIWELS----SGKCLKTLKGHS-NY---VFCCNFNPQSNLIVSGSFDESVRIWDV 140
D+K L +W++ +C+K +GH N+ + C+++P + +GS D V IWD
Sbjct: 243 DNK-LCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWDT 301
Query: 141 RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 174
+ + + LP H+ V+ F+ +I S S D
Sbjct: 302 TSRRTIYKLPGHTGSVNECVFHPTEPIIGSCSSD 335
Score = 155 (59.6 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 34/127 (26%), Positives = 64/127 (50%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWG----AYDGKFEKTISGHK----LGIS 73
TL GH ++ + SP+G +L ++ D + +W A + K GH+ +
Sbjct: 217 TLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLL 276
Query: 74 DVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 133
+WS D + +GS D+ + IW+ +S + + L GH+ V C F+P +I S S D+
Sbjct: 277 KCSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEPIIGSCSSDK 336
Query: 134 SVRIWDV 140
++ + ++
Sbjct: 337 NIYLGEI 343
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 316 (116.3 bits), Expect = 1.8e-31, Sum P(2) = 1.8e-31
Identities = 63/188 (33%), Positives = 106/188 (56%)
Query: 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 79
KF+L GH +++ V F P + S+S D I+IW G++E+++ GH + DVA+ +
Sbjct: 101 KFSLTGHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDA 160
Query: 80 DSRLLVSGSDDKTLKIWELS-SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
+LL S S D ++K+W+ S +C+KT+ GH + V F P + ++S S D ++++W
Sbjct: 161 QGKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMW 220
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 198
+V TG C+KT H + V V + +GS+ + S D R+W T S C K + D
Sbjct: 221 EVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKDC-KVELRDHEHT 279
Query: 199 VSFVKFSP 206
V + ++P
Sbjct: 280 VECIAWAP 287
Score = 251 (93.4 bits), Expect = 5.0e-24, Sum P(2) = 5.0e-24
Identities = 53/164 (32%), Positives = 93/164 (56%)
Query: 62 EK-TISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFN 120
EK +++GH+ I+ V + L+VS S+D T++IW+ +G+ ++LKGH++ V F+
Sbjct: 100 EKFSLTGHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFD 159
Query: 121 PQSNLIVSGSFDESVRIWDVRTG-KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 179
Q L+ S S D S+++WD + +C+KT+ H VS+V F G ++S+S D ++
Sbjct: 160 AQGKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKM 219
Query: 180 WDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 223
W+ A+G C+KT V V+ G + D T+++W
Sbjct: 220 WEVATGYCVKTYTGH-REWVRMVRVHIEGSIFATCSNDQTIRVW 262
Score = 229 (85.7 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 40/98 (40%), Positives = 64/98 (65%)
Query: 84 LVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 143
L SGS DKT++IW++S G CL TL GH N+V F+P +VS S D+++R+WD+R
Sbjct: 312 LASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRNK 371
Query: 144 KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181
+C+KTL AH +++ F++ ++S S D ++W+
Sbjct: 372 RCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWE 409
Score = 216 (81.1 bits), Expect = 3.4e-17, P = 3.4e-17
Identities = 47/120 (39%), Positives = 71/120 (59%)
Query: 106 TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDG 165
+L GH + F+P L+VS S D ++RIWD TG+ ++L H+D V V F+ G
Sbjct: 103 SLTGHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQG 162
Query: 166 SLIVSSSYDGLCRIWD-TASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
L+ S S D ++WD S +C+KT+ D+ VS V F P G Y+L+A+ D T+K+W+
Sbjct: 163 KLLASCSADLSIKLWDFQQSYECIKTMHGHDHN-VSSVAFVPAGDYVLSASRDRTIKMWE 221
Score = 215 (80.7 bits), Expect = 4.3e-17, P = 4.3e-17
Identities = 39/103 (37%), Positives = 64/103 (62%)
Query: 39 GEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWEL 98
G +LAS S DK I+IW G T+SGH + +A+ + LVS SDDKT+++W+L
Sbjct: 309 GPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDL 368
Query: 99 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
+ +C+KTL H ++ +F+ ++SGS D++V++W+ R
Sbjct: 369 RNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWECR 411
Score = 190 (71.9 bits), Expect = 2.6e-29, Sum P(2) = 2.6e-29
Identities = 37/105 (35%), Positives = 61/105 (58%)
Query: 122 QSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181
Q + SGS D+++RIWDV G CL TL H + V + F+ G +VS+S D R+WD
Sbjct: 308 QGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWD 367
Query: 182 TASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSK 226
+ +C+KTL + S + F Y+++ ++D T+K+W+ +
Sbjct: 368 LRNKRCMKTLYAHQHFCTS-IDFHKAHPYVISGSVDQTVKVWECR 411
Score = 163 (62.4 bits), Expect = 2.6e-29, Sum P(2) = 2.6e-29
Identities = 33/102 (32%), Positives = 57/102 (55%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
T+ GH VSSV F P G+++ S+S D+ IK+W G KT +GH+ + V +
Sbjct: 188 TMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIEG 247
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQS 123
+ + S+D+T+++W +S C L+ H + V C + P++
Sbjct: 248 SIFATCSNDQTIRVWLTNSKDCKVELRDHEHTVECIAWAPEA 289
Score = 138 (53.6 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 26/76 (34%), Positives = 45/76 (59%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL+GH V + F P G++L S+S DK I++W + + KT+ H+ + + +
Sbjct: 334 TLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAH 393
Query: 82 RLLVSGSDDKTLKIWE 97
++SGS D+T+K+WE
Sbjct: 394 PYVISGSVDQTVKVWE 409
Score = 128 (50.1 bits), Expect = 1.9e-20, Sum P(2) = 1.9e-20
Identities = 26/63 (41%), Positives = 37/63 (58%)
Query: 162 NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLK 221
+ G + S S D RIWD + G CL TL DN V + F P GKY+++A+ D T++
Sbjct: 306 HHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNW-VRGLAFHPGGKYLVSASDDKTIR 364
Query: 222 LWD 224
+WD
Sbjct: 365 VWD 367
Score = 45 (20.9 bits), Expect = 1.8e-31, Sum P(2) = 1.8e-31
Identities = 6/20 (30%), Positives = 13/20 (65%)
Query: 208 GKYILAATLDNTLKLWDSKV 227
G ++ + + D T+++WD V
Sbjct: 309 GPFLASGSRDKTIRIWDVSV 328
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 71/204 (34%), Positives = 113/204 (55%)
Query: 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 79
K+ L+GH V+ V F P + S+S D IK+W G FE+T+ GH + D+++
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
+LL S S D T+K+W+ +C++T+ GH + V P + IVS S D+++++W+
Sbjct: 161 TGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
V+TG C+KT H + V V N+DG+LI S S D R+W A+ +C L + ++ V
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHV-V 279
Query: 200 SFVKFSPNGKY--ILAATLDNTLK 221
+ ++P Y I AT T K
Sbjct: 280 ECISWAPESSYSTISEATGSETKK 303
Score = 246 (91.7 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 51/163 (31%), Positives = 94/163 (57%)
Query: 62 EK-TISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFN 120
EK +SGH+ ++ V + ++VS S+D T+K+W+ +G +TLKGH++ V +F+
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD 159
Query: 121 PQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 180
L+ S S D ++++WD + +C++T+ H VS+V +G IVS+S D ++W
Sbjct: 160 HTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMW 219
Query: 181 DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 223
+ +G C+KT V V+ + +G I + + D T+++W
Sbjct: 220 EVQTGYCVKTFTGH-REWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 217 (81.4 bits), Expect = 2.6e-17, P = 2.6e-17
Identities = 38/98 (38%), Positives = 65/98 (66%)
Query: 84 LVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 143
L+SGS DKT+K+W++S+G CL TL GH N+V F+ I+S + D+++R+WD +
Sbjct: 311 LLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDFKNK 370
Query: 144 KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181
+C+KTL AH V+++ F++ +V+ S D ++W+
Sbjct: 371 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 217 (81.4 bits), Expect = 2.6e-17, P = 2.6e-17
Identities = 42/118 (35%), Positives = 70/118 (59%)
Query: 107 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGS 166
L GH + V F+P +++VS S D ++++WD TG +TL H+D V + F+ G
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGK 163
Query: 167 LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
L+ S S D ++WD +C++T+ D+ VS V PNG +I++A+ D T+K+W+
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHN-VSSVAIMPNGDHIVSASRDKTIKMWE 220
Score = 206 (77.6 bits), Expect = 4.3e-16, P = 4.3e-16
Identities = 36/103 (34%), Positives = 63/103 (61%)
Query: 39 GEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWEL 98
G +L S S DK IK+W G T+ GH + V + S + ++S +DDKTL++W+
Sbjct: 308 GPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDF 367
Query: 99 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
+ +C+KTL H ++V +F+ + +V+GS D++V++W+ R
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 186 (70.5 bits), Expect = 6.8e-14, P = 6.8e-14
Identities = 34/101 (33%), Positives = 62/101 (61%)
Query: 126 IVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 185
++SGS D+++++WD+ TG CL TL H + V V F+ G I+S + D R+WD +
Sbjct: 311 LLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDFKNK 370
Query: 186 QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSK 226
+C+KTL ++ V+ + F Y++ ++D T+K+W+ +
Sbjct: 371 RCMKTLNAHEHF-VTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 128 (50.1 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 26/64 (40%), Positives = 38/64 (59%)
Query: 163 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 222
+ G ++S S D ++WD ++G CL TL+ DN V V F GK+IL+ D TL++
Sbjct: 306 KPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNW-VRGVLFHSGGKFILSCADDKTLRV 364
Query: 223 WDSK 226
WD K
Sbjct: 365 WDFK 368
Score = 125 (49.1 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 23/76 (30%), Positives = 45/76 (59%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GH V V F G+++ S + DK +++W + + KT++ H+ ++ + + +
Sbjct: 333 TLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDFKNKRCMKTLNAHEHFVTSLDFHKTA 392
Query: 82 RLLVSGSDDKTLKIWE 97
+V+GS D+T+K+WE
Sbjct: 393 PYVVTGSVDQTVKVWE 408
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 72/205 (35%), Positives = 116/205 (56%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKLGISDVAWSS 79
+ GH AV+ V FSP+G LAS S DK ++IW + K E T+ H + V + S
Sbjct: 55 YRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCS 113
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
D + LV+ SDDKT+K+W + L +L H N+V C F+P LIVS S D++V++WD
Sbjct: 114 DGQSLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWD 173
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
+ +C+ + H V+ V F+ G+ I ++ D ++WD + + L+ + V
Sbjct: 174 KTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHY-QLHSAAV 232
Query: 200 SFVKFSPNGKYILAATLDNTLKLWD 224
+ + F P+G Y++ A+ D+TLK+ D
Sbjct: 233 NALSFHPSGNYLITASSDSTLKILD 257
Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 65/200 (32%), Positives = 110/200 (55%)
Query: 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV 85
HT V SV F +G+ L ++S DK +K+W + +F +++ H + +S D RL+V
Sbjct: 102 HTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIV 161
Query: 86 SGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 145
S SDDKT+K+W+ +S +C+ + H +V +F+P I + D +V++WD RT +
Sbjct: 162 SASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRL 221
Query: 146 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 205
L+ HS V+A+ F+ G+ ++++S D +I D G+ L TL P + V FS
Sbjct: 222 LQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATT-VAFS 280
Query: 206 PNGKYILAATLDNTLKLWDS 225
G+Y + D + +W S
Sbjct: 281 RTGEYFASGGSDEQVMVWKS 300
Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
Identities = 71/203 (34%), Positives = 111/203 (54%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLL 84
GH AV+ V FS N + LAS S D + IW +GHK ++ V +S LL
Sbjct: 17 GHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLL 76
Query: 85 VSGSDDKTLKIWELSSGKCLKTL-KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 143
SGS DKT++IW + + K T+ + H+ V +F +V+ S D++V++W
Sbjct: 77 ASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQ 135
Query: 144 KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK 203
+ L +L H + V F+ DG LIVS+S D ++WD S +C+ + + V++V
Sbjct: 136 RFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGF-VTYVD 194
Query: 204 FSPNGKYILAATLDNTLKLWDSK 226
F P+G I AA +DNT+K+WD++
Sbjct: 195 FHPSGTCIAAAGMDNTVKVWDAR 217
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 64/168 (38%), Positives = 95/168 (56%)
Query: 58 DGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCC 117
D E+ GH+ ++ V +S +++ L SGS D TL IW + GH + V C
Sbjct: 8 DPSLERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCV 67
Query: 118 NFNPQSNLIVSGSFDESVRIWDVRTGKCLKTL-PAHSDPVSAVHFNRDGSLIVSSSYDGL 176
NF+P +L+ SGS D++VRIW V K T+ AH+ V +VHF DG +V++S D
Sbjct: 68 NFSPSGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKT 126
Query: 177 CRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
++W T + L +L N V KFSP+G+ I++A+ D T+KLWD
Sbjct: 127 VKVWSTHRQRFLFSLTQHINW-VRCAKFSPDGRLIVSASDDKTVKLWD 173
Score = 215 (80.7 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 45/160 (28%), Positives = 78/160 (48%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 80
F+L H V KFSP+G + S+S DK +K+W + + H ++ V +
Sbjct: 139 FSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPS 198
Query: 81 SRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 140
+ + D T+K+W+ + + L+ + HS V +F+P N +++ S D +++I D+
Sbjct: 199 GTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDL 258
Query: 141 RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 180
G+ L TL H P + V F+R G S D +W
Sbjct: 259 MEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
>UNIPROTKB|F1N9W1 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0045741 "positive regulation of epidermal
growth factor-activated receptor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:AADN02016174 IPI:IPI00582326
Ensembl:ENSGALT00000016428 Uniprot:F1N9W1
Length = 587
Score = 349 (127.9 bits), Expect = 2.6e-31, P = 2.6e-31
Identities = 73/205 (35%), Positives = 121/205 (59%)
Query: 23 LAGHTK-AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
L GH ++ ++F G + S S D +K+W A GK +T+ GH G+ WSS
Sbjct: 256 LKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV----WSSQM 309
Query: 82 R--LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
R +++SGS D+TLK+W +G+C+ TL GH++ V C + + + +VSGS D ++R+WD
Sbjct: 310 RDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWD 367
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
+ TG+CL L H V V + DG +VS +YD + ++WD + CL TL N
Sbjct: 368 IETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVY 425
Query: 200 SFVKFSPNGKYILAATLDNTLKLWD 224
S ++F +G ++++ +LD ++++WD
Sbjct: 426 S-LQF--DGIHVVSGSLDTSIRVWD 447
Score = 321 (118.1 bits), Expect = 3.2e-28, P = 3.2e-28
Identities = 71/207 (34%), Positives = 116/207 (56%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GHT V + + + + S S D +++W G+ + GH + V + D
Sbjct: 336 TLYGHTSTVRCMHL--HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DG 391
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
R +VSG+ D +K+W+ + CL TL+GH+N V+ F+ +VSGS D S+R+WDV
Sbjct: 392 RRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVWDVE 449
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN--PPV 199
TG C+ TL H S + +D +++VS + D +IWD +GQCL+TL + V
Sbjct: 450 TGNCIHTLTGHQSLTSGMEL-KD-NILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAV 507
Query: 200 SFVKFSPNGKYILAATLDNTLKLWDSK 226
+ ++F+ N +++ ++ D T+KLWD K
Sbjct: 508 TCLQFNKN--FVITSSDDGTVKLWDLK 532
Score = 314 (115.6 bits), Expect = 1.9e-27, P = 1.9e-27
Identities = 70/205 (34%), Positives = 111/205 (54%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GHT V S + N + S S D+ +K+W A G+ T+ GH +
Sbjct: 296 TLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVR--CMHLHE 351
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
+ +VSGS D TL++W++ +G+CL L GH V C ++ + +VSG++D V++WD
Sbjct: 352 KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR--VVSGAYDFMVKVWDPE 409
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 201
T CL TL H++ V ++ F DG +VS S D R+WD +G C+ TL + S
Sbjct: 410 TETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSL-TSG 466
Query: 202 VKFSPNGKYILAATLDNTLKLWDSK 226
++ N +++ D+T+K+WD K
Sbjct: 467 MELKDN--ILVSGNADSTVKIWDIK 489
Score = 283 (104.7 bits), Expect = 4.6e-24, P = 4.6e-24
Identities = 60/176 (34%), Positives = 97/176 (55%)
Query: 54 WGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNY 113
W + K K + GH + +R+ VSGSDD TLK+W +GKCL+TL GH+
Sbjct: 245 WRRGELKSPKVLKGHDDHVITCLQFCGNRI-VSGSDDNTLKVWSAVTGKCLRTLVGHTGG 303
Query: 114 VFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY 173
V+ + N+I+SGS D ++++W+ TG+C+ TL H+ V +H + +VS S
Sbjct: 304 VWSSQM--RDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE--KRVVSGSR 359
Query: 174 DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVT 229
D R+WD +GQCL L+ V V++ +G+ +++ D +K+WD + T
Sbjct: 360 DATLRVWDIETGQCLHVLMGHV-AAVRCVQY--DGRRVVSGAYDFMVKVWDPETET 412
Score = 272 (100.8 bits), Expect = 7.2e-23, P = 7.2e-23
Identities = 54/173 (31%), Positives = 100/173 (57%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
L GH AV V++ +G + S + D ++K+W T+ GH + + + D
Sbjct: 377 LMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGI 432
Query: 83 LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 142
+VSGS D ++++W++ +G C+ TL GH + + N++VSG+ D +V+IWD++T
Sbjct: 433 HVVSGSLDTSIRVWDVETGNCIHTLTGHQSLT--SGMELKDNILVSGNADSTVKIWDIKT 490
Query: 143 GKCLKTLPA---HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLI 192
G+CL+TL H V+ + FN++ +++SS DG ++WD +G+ ++ L+
Sbjct: 491 GQCLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKTGEFIRNLV 541
Score = 228 (85.3 bits), Expect = 4.2e-18, P = 4.2e-18
Identities = 48/131 (36%), Positives = 80/131 (61%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GHT V S++F +G + S S D I++W G T++GH+ S + +
Sbjct: 416 TLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN- 472
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKG---HSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
+LVSG+ D T+KIW++ +G+CL+TL+G H + V C FN N +++ S D +V++W
Sbjct: 473 -ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLW 529
Query: 139 DVRTGKCLKTL 149
D++TG+ ++ L
Sbjct: 530 DLKTGEFIRNL 540
>RGD|2321145 [details] [associations]
symbol:Fbxw7 "F-box and WD repeat domain containing 7, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006974 "response
to DNA damage stimulus" evidence=ISO] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0007219 "Notch signaling pathway"
evidence=ISO] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030324 "lung development" evidence=ISO] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0034644 "cellular response to
UV" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=ISO] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 RGD:2321145
GO:GO:0005783 GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974
GO:GO:0016567 GO:GO:0019005 GO:GO:0034644 GO:GO:0032876
GO:GO:2000060 GO:GO:0031146 GO:GO:0007062
GeneTree:ENSGT00690000101849 OrthoDB:EOG4MKNFW IPI:IPI00212282
ProteinModelPortal:D3ZQU4 Ensembl:ENSRNOT00000015279
UCSC:RGD:2321145 ArrayExpress:D3ZQU4 Uniprot:D3ZQU4
Length = 588
Score = 349 (127.9 bits), Expect = 2.6e-31, P = 2.6e-31
Identities = 73/205 (35%), Positives = 121/205 (59%)
Query: 23 LAGHTK-AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
L GH ++ ++F G + S S D +K+W A GK +T+ GH G+ WSS
Sbjct: 298 LKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV----WSSQM 351
Query: 82 R--LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
R +++SGS D+TLK+W +G+C+ TL GH++ V C + + + +VSGS D ++R+WD
Sbjct: 352 RDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWD 409
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
+ TG+CL L H V V + DG +VS +YD + ++WD + CL TL N
Sbjct: 410 IETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVY 467
Query: 200 SFVKFSPNGKYILAATLDNTLKLWD 224
S ++F +G ++++ +LD ++++WD
Sbjct: 468 S-LQF--DGIHVVSGSLDTSIRVWD 489
Score = 320 (117.7 bits), Expect = 4.2e-28, P = 4.2e-28
Identities = 71/207 (34%), Positives = 115/207 (55%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GHT V + + + + S S D +++W G+ + GH + V + D
Sbjct: 378 TLYGHTSTVRCMHL--HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DG 433
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
R +VSG+ D +K+W+ + CL TL+GH+N V+ F+ +VSGS D S+R+WDV
Sbjct: 434 RRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVWDVE 491
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN--PPV 199
TG C+ TL H S + +D +++VS + D +IWD +GQCL+TL V
Sbjct: 492 TGNCIHTLTGHQSLTSGMEL-KD-NILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAV 549
Query: 200 SFVKFSPNGKYILAATLDNTLKLWDSK 226
+ ++F+ N +++ ++ D T+KLWD K
Sbjct: 550 TCLQFNKN--FVITSSDDGTVKLWDLK 574
Score = 314 (115.6 bits), Expect = 1.9e-27, P = 1.9e-27
Identities = 70/205 (34%), Positives = 111/205 (54%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GHT V S + N + S S D+ +K+W A G+ T+ GH +
Sbjct: 338 TLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVR--CMHLHE 393
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
+ +VSGS D TL++W++ +G+CL L GH V C ++ + +VSG++D V++WD
Sbjct: 394 KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR--VVSGAYDFMVKVWDPE 451
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 201
T CL TL H++ V ++ F DG +VS S D R+WD +G C+ TL + S
Sbjct: 452 TETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSL-TSG 508
Query: 202 VKFSPNGKYILAATLDNTLKLWDSK 226
++ N +++ D+T+K+WD K
Sbjct: 509 MELKDN--ILVSGNADSTVKIWDIK 531
Score = 280 (103.6 bits), Expect = 9.8e-24, P = 9.8e-24
Identities = 59/176 (33%), Positives = 97/176 (55%)
Query: 54 WGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNY 113
W + + K + GH + +R+ VSGSDD TLK+W +GKCL+TL GH+
Sbjct: 287 WRRGELRSPKVLKGHDDHVITCLQFCGNRI-VSGSDDNTLKVWSAVTGKCLRTLVGHTGG 345
Query: 114 VFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY 173
V+ + N+I+SGS D ++++W+ TG+C+ TL H+ V +H + +VS S
Sbjct: 346 VWSSQM--RDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE--KRVVSGSR 401
Query: 174 DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVT 229
D R+WD +GQCL L+ V V++ +G+ +++ D +K+WD + T
Sbjct: 402 DATLRVWDIETGQCLHVLMGHV-AAVRCVQY--DGRRVVSGAYDFMVKVWDPETET 454
Score = 274 (101.5 bits), Expect = 4.4e-23, P = 4.4e-23
Identities = 55/173 (31%), Positives = 102/173 (58%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
L GH AV V++ +G + S + D ++K+W T+ GH + + + D
Sbjct: 419 LMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGI 474
Query: 83 LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 142
+VSGS D ++++W++ +G C+ TL GH + + N++VSG+ D +V+IWD++T
Sbjct: 475 HVVSGSLDTSIRVWDVETGNCIHTLTGHQSLT--SGMELKDNILVSGNADSTVKIWDIKT 532
Query: 143 GKCLKTL--PA-HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLI 192
G+CL+TL P+ H V+ + FN++ +++SS DG ++WD +G+ ++ L+
Sbjct: 533 GQCLQTLQGPSKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKTGEFIRNLV 583
Score = 228 (85.3 bits), Expect = 4.2e-18, P = 4.2e-18
Identities = 48/131 (36%), Positives = 80/131 (61%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GHT V S++F +G + S S D I++W G T++GH+ S + +
Sbjct: 458 TLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN- 514
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKG---HSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
+LVSG+ D T+KIW++ +G+CL+TL+G H + V C FN N +++ S D +V++W
Sbjct: 515 -ILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFN--KNFVITSSDDGTVKLW 571
Query: 139 DVRTGKCLKTL 149
D++TG+ ++ L
Sbjct: 572 DLKTGEFIRNL 582
>FB|FBgn0041171 [details] [associations]
symbol:ago "archipelago" species:7227 "Drosophila
melanogaster" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0008054 "cyclin catabolic process" evidence=TAS]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=NAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0030332 "cyclin binding"
evidence=TAS] [GO:0007096 "regulation of exit from mitosis"
evidence=TAS] [GO:0045926 "negative regulation of growth"
evidence=IMP] [GO:0042023 "DNA endoreduplication" evidence=IMP]
[GO:0035147 "branch fusion, open tracheal system" evidence=IMP]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] [GO:0007411 "axon guidance" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0007411 GO:GO:0007088
EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0045926
GO:GO:0019005 GO:GO:0008054 GO:GO:0007096 GO:GO:0035147
GO:GO:0042023 GO:GO:0030332 GeneTree:ENSGT00690000101849
EMBL:AY061300 EMBL:AY075401 RefSeq:NP_523922.1 RefSeq:NP_728964.1
RefSeq:NP_728965.1 UniGene:Dm.2559 ProteinModelPortal:Q9VZF4
SMR:Q9VZF4 DIP:DIP-32477N IntAct:Q9VZF4 MINT:MINT-901835
STRING:Q9VZF4 PaxDb:Q9VZF4 PRIDE:Q9VZF4 EnsemblMetazoa:FBtr0073245
EnsemblMetazoa:FBtr0073246 EnsemblMetazoa:FBtr0073247 GeneID:38516
KEGG:dme:Dmel_CG15010 UCSC:CG15010-RA CTD:38516 FlyBase:FBgn0041171
InParanoid:Q9VZF4 KO:K10260 OMA:DLEEICT OrthoDB:EOG45TB38
PhylomeDB:Q9VZF4 GenomeRNAi:38516 NextBio:809050 Bgee:Q9VZF4
GermOnline:CG15010 GO:GO:0060253 Uniprot:Q9VZF4
Length = 1326
Score = 357 (130.7 bits), Expect = 2.8e-31, P = 2.8e-31
Identities = 75/205 (36%), Positives = 122/205 (59%)
Query: 23 LAGHTK-AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD- 80
L GH ++ ++FS G + S S D +K+W A +GK +T+ GH G+ WSS
Sbjct: 990 LKGHDDHVITCLQFS--GNRIVSGSDDNTLKVWSAVNGKCLRTLVGHTGGV----WSSQM 1043
Query: 81 -SRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
+++SGS D+TLK+W++ SG C+ TL+GH++ V C + + + +VSGS D ++R+WD
Sbjct: 1044 SGNIIISGSTDRTLKVWDMDSGACVHTLQGHTSTVRCMHLH--GSKVVSGSRDATLRVWD 1101
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
+ G CL L H V V + DG LIVS +YD + +IW +CL TL N
Sbjct: 1102 IEQGSCLHVLVGHLAAVRCVQY--DGKLIVSGAYDYMVKIWHPERQECLHTLQGHTNRVY 1159
Query: 200 SFVKFSPNGKYILAATLDNTLKLWD 224
S ++F +G ++++ +LD ++++WD
Sbjct: 1160 S-LQF--DGLHVVSGSLDTSIRVWD 1181
Score = 331 (121.6 bits), Expect = 1.6e-28, P = 1.6e-28
Identities = 71/207 (34%), Positives = 114/207 (55%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GHT V + +G + S S D +++W G + GH + V + D
Sbjct: 1070 TLQGHTSTVRCMHL--HGSKVVSGSRDATLRVWDIEQGSCLHVLVGHLAAVRCVQY--DG 1125
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
+L+VSG+ D +KIW +CL TL+GH+N V+ F+ +VSGS D S+R+WDV
Sbjct: 1126 KLIVSGAYDYMVKIWHPERQECLHTLQGHTNRVYSLQFDGLH--VVSGSLDTSIRVWDVE 1183
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD--NPPV 199
TG C TL H S + ++ ++VS + D ++WD +GQCL+TL + + V
Sbjct: 1184 TGNCKHTLMGHQSLTSGMELRQN--ILVSGNADSTVKVWDITTGQCLQTLSGPNKHHSAV 1241
Query: 200 SFVKFSPNGKYILAATLDNTLKLWDSK 226
+ ++F N ++++ ++ D T+KLWD K
Sbjct: 1242 TCLQF--NSRFVVTSSDDGTVKLWDVK 1266
Score = 301 (111.0 bits), Expect = 2.6e-25, P = 2.6e-25
Identities = 70/203 (34%), Positives = 106/203 (52%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GHT V S + S G + S S D+ +K+W G T+ GH + +
Sbjct: 1030 TLVGHTGGVWSSQMS--GNIIISGSTDRTLKVWDMDSGACVHTLQGHTSTVRCMHLHGSK 1087
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
+VSGS D TL++W++ G CL L GH V C ++ LIVSG++D V+IW
Sbjct: 1088 --VVSGSRDATLRVWDIEQGSCLHVLVGHLAAVRCVQYD--GKLIVSGAYDYMVKIWHPE 1143
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 201
+CL TL H++ V ++ F DG +VS S D R+WD +G C TL+ + S
Sbjct: 1144 RQECLHTLQGHTNRVYSLQF--DGLHVVSGSLDTSIRVWDVETGNCKHTLMGHQSL-TSG 1200
Query: 202 VKFSPNGKYILAATLDNTLKLWD 224
++ N +++ D+T+K+WD
Sbjct: 1201 MELRQN--ILVSGNADSTVKVWD 1221
Score = 266 (98.7 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 56/177 (31%), Positives = 99/177 (55%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
L GH AV V++ +G+ + S + D ++KIW + T+ GH + + + D
Sbjct: 1111 LVGHLAAVRCVQY--DGKLIVSGAYDYMVKIWHPERQECLHTLQGHTNRVYSLQF--DGL 1166
Query: 83 LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 142
+VSGS D ++++W++ +G C TL GH + + N++VSG+ D +V++WD+ T
Sbjct: 1167 HVVSGSLDTSIRVWDVETGNCKHTLMGHQSLT--SGMELRQNILVSGNADSTVKVWDITT 1224
Query: 143 GKCLKTLPA---HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 196
G+CL+TL H V+ + FN +V+SS DG ++WD +G ++ L+ D+
Sbjct: 1225 GQCLQTLSGPNKHHSAVTCLQFN--SRFVVTSSDDGTVKLWDVKTGDFIRNLVALDS 1279
Score = 229 (85.7 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 50/133 (37%), Positives = 80/133 (60%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GHT V S++F +G + S S D I++W G + T+ GH+ S + +
Sbjct: 1150 TLQGHTNRVYSLQF--DGLHVVSGSLDTSIRVWDVETGNCKHTLMGHQSLTSGMELRQN- 1206
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKG---HSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
+LVSG+ D T+K+W++++G+CL+TL G H + V C FN S +V+ S D +V++W
Sbjct: 1207 -ILVSGNADSTVKVWDITTGQCLQTLSGPNKHHSAVTCLQFN--SRFVVTSSDDGTVKLW 1263
Query: 139 DVRTGKCLKTLPA 151
DV+TG ++ L A
Sbjct: 1264 DVKTGDFIRNLVA 1276
Score = 192 (72.6 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 42/120 (35%), Positives = 66/120 (55%)
Query: 105 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRD 164
K LKGH ++V C N IVSGS D ++++W GKCL+TL H+ V + +
Sbjct: 988 KVLKGHDDHVITC-LQFSGNRIVSGSDDNTLKVWSAVNGKCLRTLVGHTGGVWSSQMS-- 1044
Query: 165 GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
G++I+S S D ++WD SG C+ TL V + +G +++ + D TL++WD
Sbjct: 1045 GNIIISGSTDRTLKVWDMDSGACVHTL-QGHTSTVRCMHL--HGSKVVSGSRDATLRVWD 1101
Score = 128 (50.1 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 30/89 (33%), Positives = 48/89 (53%)
Query: 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 79
K TL GH S ++ N L S +AD +K+W G+ +T+SG S V
Sbjct: 1188 KHTLMGHQSLTSGMELRQN--ILVSGNADSTVKVWDITTGQCLQTLSGPNKHHSAVTCLQ 1245
Query: 80 -DSRLLVSGSDDKTLKIWELSSGKCLKTL 107
+SR +V+ SDD T+K+W++ +G ++ L
Sbjct: 1246 FNSRFVVTSSDDGTVKLWDVKTGDFIRNL 1274
Score = 37 (18.1 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 72 ISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYV 114
+ DV SS+S+ + D +E+SS L T G ++ V
Sbjct: 74 VEDVCVSSNSQHGFAVVLDDESSTFEISSSNSLPTSAGAASTV 116
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
Identities = 70/204 (34%), Positives = 113/204 (55%)
Query: 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 79
K+ L+GH V+ V F P + S+S D IK+W G FE+T+ GH + D+++
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
+LL S S D T+K+W+ +C++T+ GH + V P + IVS + D+++++W+
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWE 220
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
V+TG C+KT H + V V N+DG+LI S S D R+W A+ +C L + ++ V
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHV-V 279
Query: 200 SFVKFSPNGKY--ILAATLDNTLK 221
+ ++P Y I AT T K
Sbjct: 280 ECISWAPESSYSSISEATGSETKK 303
Score = 244 (91.0 bits), Expect = 2.4e-20, P = 2.4e-20
Identities = 50/163 (30%), Positives = 94/163 (57%)
Query: 62 EK-TISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFN 120
EK +SGH+ ++ V + ++VS S+D T+K+W+ +G +TLKGH++ V +F+
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD 159
Query: 121 PQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 180
L+ S S D ++++WD + +C++T+ H VS+V +G IVS++ D ++W
Sbjct: 160 HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMW 219
Query: 181 DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 223
+ +G C+KT V V+ + +G I + + D T+++W
Sbjct: 220 EVQTGYCVKTFTGH-REWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 217 (81.4 bits), Expect = 2.6e-17, P = 2.6e-17
Identities = 42/118 (35%), Positives = 69/118 (58%)
Query: 107 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGS 166
L GH + V F+P +++VS S D ++++WD TG +TL H+D V + F+ G
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 167 LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
L+ S S D ++WD +C++T+ D+ VS V PNG +I++A D T+K+W+
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHN-VSSVAIMPNGDHIVSAARDKTIKMWE 220
Score = 216 (81.1 bits), Expect = 3.3e-17, P = 3.3e-17
Identities = 38/98 (38%), Positives = 65/98 (66%)
Query: 84 LVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 143
L+SGS DKT+K+W++S+G CL TL GH N+V F+ I+S + D+++R+WD +
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 144 KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181
+C+KTL AH V+++ F++ +V+ S D ++W+
Sbjct: 371 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 206 (77.6 bits), Expect = 4.3e-16, P = 4.3e-16
Identities = 36/103 (34%), Positives = 63/103 (61%)
Query: 39 GEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWEL 98
G +L S S DK IK+W G T+ GH + V + S + ++S +DDKTL++W+
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 99 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
+ +C+KTL H ++V +F+ + +V+GS D++V++W+ R
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 187 (70.9 bits), Expect = 5.3e-14, P = 5.3e-14
Identities = 35/101 (34%), Positives = 62/101 (61%)
Query: 126 IVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 185
++SGS D+++++WDV TG CL TL H + V V F+ G I+S + D R+WD +
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 186 QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSK 226
+C+KTL ++ V+ + F Y++ ++D T+K+W+ +
Sbjct: 371 RCMKTLNAHEHF-VTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 129 (50.5 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 26/64 (40%), Positives = 38/64 (59%)
Query: 163 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 222
+ G ++S S D ++WD ++G CL TL+ DN V V F GK+IL+ D TL++
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW-VRGVLFHSGGKFILSCADDKTLRV 364
Query: 223 WDSK 226
WD K
Sbjct: 365 WDYK 368
Score = 125 (49.1 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 23/76 (30%), Positives = 45/76 (59%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GH V V F G+++ S + DK +++W + + KT++ H+ ++ + + +
Sbjct: 333 TLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTA 392
Query: 82 RLLVSGSDDKTLKIWE 97
+V+GS D+T+K+WE
Sbjct: 393 PYVVTGSVDQTVKVWE 408
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
Identities = 68/205 (33%), Positives = 112/205 (54%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKLGISDVAWSS 79
F GHT ++ V F+P+G +ASSS D+ +++W K E T+ H + V +S
Sbjct: 54 FRFVGHTDVITGVNFAPSGSLVASSSRDQTVRLWTP-SIKGESTVFKAHTASVRSVHFSR 112
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
D + LV+ SDDK++K+W + K L +L H+N+V C F+P LI S D +VR+WD
Sbjct: 113 DGQRLVTASDDKSVKVWGVERKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWD 172
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
+ +C+ + + V FN G+ I SS D +IWD + + ++ N V
Sbjct: 173 TSSHQCINIFTDYGGSATFVDFNSSGTCIASSGADNTIKIWDIRTNKLIQHY-KVHNAGV 231
Query: 200 SFVKFSPNGKYILAATLDNTLKLWD 224
+ F P+G Y+++ + D+T+K+ D
Sbjct: 232 NCFSFHPSGNYLISGSSDSTIKILD 256
Score = 299 (110.3 bits), Expect = 3.8e-26, P = 3.8e-26
Identities = 61/198 (30%), Positives = 103/198 (52%)
Query: 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV 85
HT +V SV FS +G+ L ++S DK +K+WG KF +++ H + +S D RL+
Sbjct: 101 HTASVRSVHFSRDGQRLVTASDDKSVKVWGVERKKFLYSLNRHTNWVRCARFSPDGRLIA 160
Query: 86 SGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 145
S DD+T+++W+ SS +C+ + +FN I S D +++IWD+RT K
Sbjct: 161 SCGDDRTVRLWDTSSHQCINIFTDYGGSATFVDFNSSGTCIASSGADNTIKIWDIRTNKL 220
Query: 146 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 205
++ H+ V+ F+ G+ ++S S D +I D G+ + TL PV V FS
Sbjct: 221 IQHYKVHNAGVNCFSFHPSGNYLISGSSDSTIKILDLLEGRLIYTL-HGHKGPVLTVTFS 279
Query: 206 PNGKYILAATLDNTLKLW 223
+G + D+ + +W
Sbjct: 280 RDGDLFASGGADSQVLMW 297
Score = 294 (108.6 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 66/200 (33%), Positives = 102/200 (51%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLL 84
GH +S F+PN + LA+ S DK + IW GH I+ V ++ L+
Sbjct: 16 GHKDVISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNFAPSGSLV 75
Query: 85 VSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK 144
S S D+T+++W S K H+ V +F+ +V+ S D+SV++W V K
Sbjct: 76 ASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTASDDKSVKVWGVERKK 135
Query: 145 CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKF 204
L +L H++ V F+ DG LI S D R+WDT+S QC+ + D +FV F
Sbjct: 136 FLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCIN-IFTDYGGSATFVDF 194
Query: 205 SPNGKYILAATLDNTLKLWD 224
+ +G I ++ DNT+K+WD
Sbjct: 195 NSSGTCIASSGADNTIKIWD 214
Score = 254 (94.5 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 50/162 (30%), Positives = 85/162 (52%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 80
++L HT V +FSP+G +AS D+ +++W + + + + V ++S
Sbjct: 138 YSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTDYGGSATFVDFNSS 197
Query: 81 SRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 140
+ S D T+KIW++ + K ++ K H+ V C +F+P N ++SGS D +++I D+
Sbjct: 198 GTCIASSGADNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPSGNYLISGSSDSTIKILDL 257
Query: 141 RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 182
G+ + TL H PV V F+RDG L S D +W T
Sbjct: 258 LEGRLIYTLHGHKGPVLTVTFSRDGDLFASGGADSQVLMWKT 299
Score = 238 (88.8 bits), Expect = 2.2e-19, P = 2.2e-19
Identities = 55/168 (32%), Positives = 89/168 (52%)
Query: 58 DGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCC 117
D E+ GHK IS ++ +++ L +GS DK+L IW L+ GH++ +
Sbjct: 7 DPTLERHFKGHKDVISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFVGHTDVITGV 66
Query: 118 NFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 177
NF P +L+ S S D++VR+W AH+ V +VHF+RDG +V++S D
Sbjct: 67 NFAPSGSLVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTASDDKSV 126
Query: 178 RIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225
++W + L +L N V +FSP+G+ I + D T++LWD+
Sbjct: 127 KVWGVERKKFLYSLNRHTNW-VRCARFSPDGRLIASCGDDRTVRLWDT 173
>UNIPROTKB|F1MNN4 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000060 "positive regulation of protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:DAAA02044177 IPI:IPI00716528 UniGene:Bt.24006
ProteinModelPortal:F1MNN4 Ensembl:ENSBTAT00000010457 Uniprot:F1MNN4
Length = 627
Score = 349 (127.9 bits), Expect = 3.5e-31, P = 3.5e-31
Identities = 73/205 (35%), Positives = 121/205 (59%)
Query: 23 LAGHTK-AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
L GH ++ ++F G + S S D +K+W A GK +T+ GH G+ WSS
Sbjct: 296 LKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV----WSSQM 349
Query: 82 R--LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
R +++SGS D+TLK+W +G+C+ TL GH++ V C + + + +VSGS D ++R+WD
Sbjct: 350 RDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWD 407
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
+ TG+CL L H V V + DG +VS +YD + ++WD + CL TL N
Sbjct: 408 IETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVY 465
Query: 200 SFVKFSPNGKYILAATLDNTLKLWD 224
S ++F +G ++++ +LD ++++WD
Sbjct: 466 S-LQF--DGIHVVSGSLDTSIRVWD 487
Score = 321 (118.1 bits), Expect = 4.1e-28, P = 4.1e-28
Identities = 71/207 (34%), Positives = 116/207 (56%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GHT V + + + + S S D +++W G+ + GH + V + D
Sbjct: 376 TLYGHTSTVRCMHL--HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DG 431
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
R +VSG+ D +K+W+ + CL TL+GH+N V+ F+ +VSGS D S+R+WDV
Sbjct: 432 RRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVWDVE 489
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN--PPV 199
TG C+ TL H S + +D +++VS + D +IWD +GQCL+TL + V
Sbjct: 490 TGNCIHTLTGHQSLTSGMEL-KD-NILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAV 547
Query: 200 SFVKFSPNGKYILAATLDNTLKLWDSK 226
+ ++F+ N +++ ++ D T+KLWD K
Sbjct: 548 TCLQFNKN--FVITSSDDGTVKLWDLK 572
Score = 314 (115.6 bits), Expect = 2.4e-27, P = 2.4e-27
Identities = 70/205 (34%), Positives = 111/205 (54%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GHT V S + N + S S D+ +K+W A G+ T+ GH +
Sbjct: 336 TLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVR--CMHLHE 391
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
+ +VSGS D TL++W++ +G+CL L GH V C ++ + +VSG++D V++WD
Sbjct: 392 KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR--VVSGAYDFMVKVWDPE 449
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 201
T CL TL H++ V ++ F DG +VS S D R+WD +G C+ TL + S
Sbjct: 450 TETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSL-TSG 506
Query: 202 VKFSPNGKYILAATLDNTLKLWDSK 226
++ N +++ D+T+K+WD K
Sbjct: 507 MELKDN--ILVSGNADSTVKIWDIK 529
Score = 283 (104.7 bits), Expect = 5.5e-24, P = 5.5e-24
Identities = 60/176 (34%), Positives = 97/176 (55%)
Query: 54 WGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNY 113
W + K K + GH + +R+ VSGSDD TLK+W +GKCL+TL GH+
Sbjct: 285 WRRGELKSPKVLKGHDDHVITCLQFCGNRI-VSGSDDNTLKVWSAVTGKCLRTLVGHTGG 343
Query: 114 VFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY 173
V+ + N+I+SGS D ++++W+ TG+C+ TL H+ V +H + +VS S
Sbjct: 344 VWSSQM--RDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE--KRVVSGSR 399
Query: 174 DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVT 229
D R+WD +GQCL L+ V V++ +G+ +++ D +K+WD + T
Sbjct: 400 DATLRVWDIETGQCLHVLMGHV-AAVRCVQY--DGRRVVSGAYDFMVKVWDPETET 452
Score = 272 (100.8 bits), Expect = 8.6e-23, P = 8.6e-23
Identities = 54/173 (31%), Positives = 100/173 (57%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
L GH AV V++ +G + S + D ++K+W T+ GH + + + D
Sbjct: 417 LMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGI 472
Query: 83 LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 142
+VSGS D ++++W++ +G C+ TL GH + + N++VSG+ D +V+IWD++T
Sbjct: 473 HVVSGSLDTSIRVWDVETGNCIHTLTGHQSLT--SGMELKDNILVSGNADSTVKIWDIKT 530
Query: 143 GKCLKTLPA---HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLI 192
G+CL+TL H V+ + FN++ +++SS DG ++WD +G+ ++ L+
Sbjct: 531 GQCLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKTGEFIRNLV 581
Score = 228 (85.3 bits), Expect = 4.8e-18, P = 4.8e-18
Identities = 48/131 (36%), Positives = 80/131 (61%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GHT V S++F +G + S S D I++W G T++GH+ S + +
Sbjct: 456 TLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN- 512
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKG---HSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
+LVSG+ D T+KIW++ +G+CL+TL+G H + V C FN N +++ S D +V++W
Sbjct: 513 -ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLW 569
Query: 139 DVRTGKCLKTL 149
D++TG+ ++ L
Sbjct: 570 DLKTGEFIRNL 580
>MGI|MGI:1354695 [details] [associations]
symbol:Fbxw7 "F-box and WD-40 domain protein 7"
species:10090 "Mus musculus" [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007219 "Notch signaling pathway" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO;ISA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO] [GO:0030324 "lung
development" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050821 "protein stabilization" evidence=ISO]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=ISO] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] Reactome:REACT_93132 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 MGI:MGI:1354695 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030324
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0001570
GO:GO:0019005 GO:GO:0031146 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 HOVERGEN:HBG051596 OMA:EECLHTL EMBL:AF391202
EMBL:AF391193 EMBL:AF391194 EMBL:AF391195 EMBL:AF391196
EMBL:AF391197 EMBL:AF391198 EMBL:AF391199 EMBL:AF391200
EMBL:AF391201 EMBL:AF391192 EMBL:AF427101 EMBL:BC131648
EMBL:AK032174 IPI:IPI00162935 RefSeq:NP_536353.2 UniGene:Mm.196475
ProteinModelPortal:Q8VBV4 SMR:Q8VBV4 STRING:Q8VBV4 PRIDE:Q8VBV4
Ensembl:ENSMUST00000029727 GeneID:50754 KEGG:mmu:50754
UCSC:uc008pql.2 HOGENOM:HOG000236264 NextBio:307631 Bgee:Q8VBV4
Genevestigator:Q8VBV4 GermOnline:ENSMUSG00000028086 Uniprot:Q8VBV4
Length = 629
Score = 349 (127.9 bits), Expect = 3.6e-31, P = 3.6e-31
Identities = 73/205 (35%), Positives = 121/205 (59%)
Query: 23 LAGHTK-AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
L GH ++ ++F G + S S D +K+W A GK +T+ GH G+ WSS
Sbjct: 298 LKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV----WSSQM 351
Query: 82 R--LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
R +++SGS D+TLK+W +G+C+ TL GH++ V C + + + +VSGS D ++R+WD
Sbjct: 352 RDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWD 409
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
+ TG+CL L H V V + DG +VS +YD + ++WD + CL TL N
Sbjct: 410 IETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVY 467
Query: 200 SFVKFSPNGKYILAATLDNTLKLWD 224
S ++F +G ++++ +LD ++++WD
Sbjct: 468 S-LQF--DGIHVVSGSLDTSIRVWD 489
Score = 320 (117.7 bits), Expect = 5.3e-28, P = 5.3e-28
Identities = 71/207 (34%), Positives = 115/207 (55%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GHT V + + + + S S D +++W G+ + GH + V + D
Sbjct: 378 TLYGHTSTVRCMHL--HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DG 433
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
R +VSG+ D +K+W+ + CL TL+GH+N V+ F+ +VSGS D S+R+WDV
Sbjct: 434 RRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVWDVE 491
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN--PPV 199
TG C+ TL H S + +D +++VS + D +IWD +GQCL+TL V
Sbjct: 492 TGNCIHTLTGHQSLTSGMEL-KD-NILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAV 549
Query: 200 SFVKFSPNGKYILAATLDNTLKLWDSK 226
+ ++F+ N +++ ++ D T+KLWD K
Sbjct: 550 TCLQFNKN--FVITSSDDGTVKLWDLK 574
Score = 314 (115.6 bits), Expect = 2.4e-27, P = 2.4e-27
Identities = 70/205 (34%), Positives = 111/205 (54%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GHT V S + N + S S D+ +K+W A G+ T+ GH +
Sbjct: 338 TLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVR--CMHLHE 393
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
+ +VSGS D TL++W++ +G+CL L GH V C ++ + +VSG++D V++WD
Sbjct: 394 KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR--VVSGAYDFMVKVWDPE 451
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 201
T CL TL H++ V ++ F DG +VS S D R+WD +G C+ TL + S
Sbjct: 452 TETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSL-TSG 508
Query: 202 VKFSPNGKYILAATLDNTLKLWDSK 226
++ N +++ D+T+K+WD K
Sbjct: 509 MELKDN--ILVSGNADSTVKIWDIK 531
Score = 283 (104.7 bits), Expect = 5.6e-24, P = 5.6e-24
Identities = 60/176 (34%), Positives = 97/176 (55%)
Query: 54 WGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNY 113
W + K K + GH + +R+ VSGSDD TLK+W +GKCL+TL GH+
Sbjct: 287 WRRGELKSPKVLKGHDDHVITCLQFCGNRI-VSGSDDNTLKVWSAVTGKCLRTLVGHTGG 345
Query: 114 VFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY 173
V+ + N+I+SGS D ++++W+ TG+C+ TL H+ V +H + +VS S
Sbjct: 346 VWSSQM--RDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE--KRVVSGSR 401
Query: 174 DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVT 229
D R+WD +GQCL L+ V V++ +G+ +++ D +K+WD + T
Sbjct: 402 DATLRVWDIETGQCLHVLMGHV-AAVRCVQY--DGRRVVSGAYDFMVKVWDPETET 454
Score = 274 (101.5 bits), Expect = 5.2e-23, P = 5.2e-23
Identities = 55/173 (31%), Positives = 102/173 (58%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
L GH AV V++ +G + S + D ++K+W T+ GH + + + D
Sbjct: 419 LMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGI 474
Query: 83 LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 142
+VSGS D ++++W++ +G C+ TL GH + + N++VSG+ D +V+IWD++T
Sbjct: 475 HVVSGSLDTSIRVWDVETGNCIHTLTGHQSLT--SGMELKDNILVSGNADSTVKIWDIKT 532
Query: 143 GKCLKTL--PA-HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLI 192
G+CL+TL P+ H V+ + FN++ +++SS DG ++WD +G+ ++ L+
Sbjct: 533 GQCLQTLQGPSKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKTGEFIRNLV 583
Score = 228 (85.3 bits), Expect = 4.9e-18, P = 4.9e-18
Identities = 48/131 (36%), Positives = 80/131 (61%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GHT V S++F +G + S S D I++W G T++GH+ S + +
Sbjct: 458 TLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN- 514
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKG---HSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
+LVSG+ D T+KIW++ +G+CL+TL+G H + V C FN N +++ S D +V++W
Sbjct: 515 -ILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFN--KNFVITSSDDGTVKLW 571
Query: 139 DVRTGKCLKTL 149
D++TG+ ++ L
Sbjct: 572 DLKTGEFIRNL 582
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
Identities = 72/205 (35%), Positives = 115/205 (56%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKLGISDVAWSS 79
+ GH AV+ V FSP+G LAS S DK ++IW + K E T+ H + V + S
Sbjct: 55 YRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCS 113
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
D + V+ SDDKT+K+W K L +L H N+V C F+P LIVS S D++V++WD
Sbjct: 114 DGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD 173
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
+ +C+ + H V+ V F+ G+ I ++ D ++WD + + L+ + V
Sbjct: 174 KSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHY-QLHSAAV 232
Query: 200 SFVKFSPNGKYILAATLDNTLKLWD 224
+ + F P+G Y++ A+ D+TLK+ D
Sbjct: 233 NGLSFHPSGNYLITASSDSTLKILD 257
Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 67/200 (33%), Positives = 109/200 (54%)
Query: 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV 85
HT V SV F +G+ ++S DK +K+W + KF ++S H + +S D RL+V
Sbjct: 102 HTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIV 161
Query: 86 SGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 145
S SDDKT+K+W+ SS +C+ + H +V +F+P I + D +V++WDVRT +
Sbjct: 162 SASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRL 221
Query: 146 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 205
L+ HS V+ + F+ G+ ++++S D +I D G+ L TL P + V FS
Sbjct: 222 LQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATT-VAFS 280
Query: 206 PNGKYILAATLDNTLKLWDS 225
G+Y + D + +W S
Sbjct: 281 RTGEYFASGGSDEQVMVWKS 300
Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 71/201 (35%), Positives = 109/201 (54%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLL 84
GH AV+ V FS N + LAS S D + +W +GHK ++ V +S LL
Sbjct: 17 GHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLL 76
Query: 85 VSGSDDKTLKIWELSSGKCLKTL-KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 143
SGS DKT++IW + + K T+ + H+ V +F V+ S D++V++W
Sbjct: 77 ASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQ 135
Query: 144 KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK 203
K L +L H + V F+ DG LIVS+S D ++WD +S +C+ + + V++V
Sbjct: 136 KFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGF-VTYVD 194
Query: 204 FSPNGKYILAATLDNTLKLWD 224
F P+G I AA +DNT+K+WD
Sbjct: 195 FHPSGTCIAAAGMDNTVKVWD 215
Score = 265 (98.3 bits), Expect = 8.6e-23, P = 8.6e-23
Identities = 63/170 (37%), Positives = 94/170 (55%)
Query: 56 AYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVF 115
A D E+ GH+ ++ V +S +++ L SGS D L +W + GH + V
Sbjct: 6 AEDPSLERHFKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVT 65
Query: 116 CCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTL-PAHSDPVSAVHFNRDGSLIVSSSYD 174
C NF+P +L+ SGS D++VRIW V K T+ AH+ V +VHF DG V++S D
Sbjct: 66 CVNFSPSGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDD 124
Query: 175 GLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
++W T + L +L N V KFSP+G+ I++A+ D T+KLWD
Sbjct: 125 KTVKVWATHRQKFLFSLSQHINW-VRCAKFSPDGRLIVSASDDKTVKLWD 173
Score = 216 (81.1 bits), Expect = 3.3e-17, P = 3.3e-17
Identities = 45/160 (28%), Positives = 80/160 (50%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 80
F+L+ H V KFSP+G + S+S DK +K+W + + H ++ V +
Sbjct: 139 FSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPS 198
Query: 81 SRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 140
+ + D T+K+W++ + + L+ + HS V +F+P N +++ S D +++I D+
Sbjct: 199 GTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDL 258
Query: 141 RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 180
G+ L TL H P + V F+R G S D +W
Sbjct: 259 MEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
Identities = 71/205 (34%), Positives = 115/205 (56%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKLGISDVAWSS 79
+ GH AV+ V FSP+G LAS S DK ++IW + K E T+ H + V + S
Sbjct: 86 YRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIW-VPNIKGESTVFRAHTATVRSVHFCS 144
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
D + V+ SDDKT+K+W K L +L H N+V C F+P LIVS S D++V++WD
Sbjct: 145 DGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD 204
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
+ +C+ + H V+ V F+ G+ + ++ D ++WD + + L+ + V
Sbjct: 205 KTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHY-QLHSAAV 263
Query: 200 SFVKFSPNGKYILAATLDNTLKLWD 224
+ + F P+G Y++ A+ D+TLK+ D
Sbjct: 264 NALSFHPSGNYLVTASSDSTLKILD 288
Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
Identities = 68/200 (34%), Positives = 110/200 (55%)
Query: 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV 85
HT V SV F +G+ ++S DK IK+W + KF ++S H + +S D RL+V
Sbjct: 133 HTATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIV 192
Query: 86 SGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 145
S SDDKT+K+W+ +S +C+ + H +V +F+P + + D +V++WDVRT +
Sbjct: 193 SASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRL 252
Query: 146 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 205
L+ HS V+A+ F+ G+ +V++S D +I D G+ L TL P + V FS
Sbjct: 253 LQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATT-VAFS 311
Query: 206 PNGKYILAATLDNTLKLWDS 225
G+Y + D + +W S
Sbjct: 312 RTGEYFASGGSDEQVMVWKS 331
Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 69/201 (34%), Positives = 108/201 (53%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLL 84
GH AV+ V FS N + LAS S D + +W +GHK ++ V +S LL
Sbjct: 48 GHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLL 107
Query: 85 VSGSDDKTLKIWELSSGKCLKTL-KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 143
SGS DKT++IW + + K T+ + H+ V +F V+ S D+++++W
Sbjct: 108 ASGSRDKTVRIW-VPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQ 166
Query: 144 KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK 203
K L +L H + V F+ DG LIVS+S D ++WD S +C+ + + V++V
Sbjct: 167 KFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGF-VTYVD 225
Query: 204 FSPNGKYILAATLDNTLKLWD 224
F P+G + AA +DNT+K+WD
Sbjct: 226 FHPSGTCVAAAGMDNTVKVWD 246
Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 62/168 (36%), Positives = 92/168 (54%)
Query: 58 DGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCC 117
D E+ GH+ ++ V +S + + L SGS D L +W + GH + V C
Sbjct: 39 DPSLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCV 98
Query: 118 NFNPQSNLIVSGSFDESVRIWDVRTGKCLKTL-PAHSDPVSAVHFNRDGSLIVSSSYDGL 176
NF+P +L+ SGS D++VRIW V K T+ AH+ V +VHF DG V++S D
Sbjct: 99 NFSPSGHLLASGSRDKTVRIW-VPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKT 157
Query: 177 CRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
++W T + L +L N V KFSP+G+ I++A+ D T+KLWD
Sbjct: 158 IKVWSTHRQKFLFSLSQHINW-VRCAKFSPDGRLIVSASDDKTVKLWD 204
Score = 219 (82.2 bits), Expect = 9.6e-18, P = 9.6e-18
Identities = 46/160 (28%), Positives = 80/160 (50%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 80
F+L+ H V KFSP+G + S+S DK +K+W + + H ++ V +
Sbjct: 170 FSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPS 229
Query: 81 SRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 140
+ + D T+K+W++ + + L+ + HS V +F+P N +V+ S D +++I D+
Sbjct: 230 GTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDL 289
Query: 141 RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 180
G+ L TL H P + V F+R G S D +W
Sbjct: 290 MEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 329
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
Identities = 72/205 (35%), Positives = 115/205 (56%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKLGISDVAWSS 79
+ GH AV+ V FSP+G LAS S DK ++IW + K E T+ H + V + S
Sbjct: 17 YRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCS 75
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
D + V+ SDDKT+K+W K L +L H N+V C F+P LIVS S D++V++WD
Sbjct: 76 DGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD 135
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
+ +C+ + H V+ V F+ G+ I ++ D ++WD + + L+ + V
Sbjct: 136 KSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHY-QLHSAAV 194
Query: 200 SFVKFSPNGKYILAATLDNTLKLWD 224
+ + F P+G Y++ A+ D+TLK+ D
Sbjct: 195 NGLSFHPSGNYLITASSDSTLKILD 219
Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 67/200 (33%), Positives = 109/200 (54%)
Query: 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV 85
HT V SV F +G+ ++S DK +K+W + KF ++S H + +S D RL+V
Sbjct: 64 HTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIV 123
Query: 86 SGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 145
S SDDKT+K+W+ SS +C+ + H +V +F+P I + D +V++WDVRT +
Sbjct: 124 SASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRL 183
Query: 146 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 205
L+ HS V+ + F+ G+ ++++S D +I D G+ L TL P + V FS
Sbjct: 184 LQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATT-VAFS 242
Query: 206 PNGKYILAATLDNTLKLWDS 225
G+Y + D + +W S
Sbjct: 243 RTGEYFASGGSDEQVMVWKS 262
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 59/178 (33%), Positives = 95/178 (53%)
Query: 48 DKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTL 107
D + +W +GHK ++ V +S LL SGS DKT++IW + + K T+
Sbjct: 2 DSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIW-VPNVKGESTV 60
Query: 108 -KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGS 166
+ H+ V +F V+ S D++V++W K L +L H + V F+ DG
Sbjct: 61 FRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGR 120
Query: 167 LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
LIVS+S D ++WD +S +C+ + + V++V F P+G I AA +DNT+K+WD
Sbjct: 121 LIVSASDDKTVKLWDKSSRECVHSYCEHGGF-VTYVDFHPSGTCIAAAGMDNTVKVWD 177
Score = 216 (81.1 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 45/160 (28%), Positives = 80/160 (50%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 80
F+L+ H V KFSP+G + S+S DK +K+W + + H ++ V +
Sbjct: 101 FSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPS 160
Query: 81 SRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 140
+ + D T+K+W++ + + L+ + HS V +F+P N +++ S D +++I D+
Sbjct: 161 GTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDL 220
Query: 141 RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 180
G+ L TL H P + V F+R G S D +W
Sbjct: 221 MEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 260
>UNIPROTKB|Q969H0 [details] [associations]
symbol:FBXW7 "F-box/WD repeat-containing protein 7"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0034644 "cellular response to UV" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=IDA] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=IDA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IMP] [GO:2000346 "negative regulation of
hepatocyte proliferation" evidence=ISS] [GO:0055088 "lipid
homeostasis" evidence=ISS] [GO:0032880 "regulation of protein
localization" evidence=ISS] [GO:0010883 "regulation of lipid
storage" evidence=ISS] [GO:0010868 "negative regulation of
triglyceride biosynthetic process" evidence=ISS] [GO:0001944
"vasculature development" evidence=TAS] [GO:0045746 "negative
regulation of Notch signaling pathway" evidence=ISS] [GO:2000639
"negative regulation of SREBP signaling pathway" evidence=ISS]
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
GO:GO:0005783 GO:GO:0005794 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0043234 GO:GO:0050821
GO:GO:0005654 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 GO:GO:0032880 SUPFAM:SSF81383
GO:GO:0006974 GO:GO:0016567 GO:GO:0055088 GO:GO:0019005
GO:GO:0034644 GO:GO:0001944 GO:GO:0032876 GO:GO:0010883
GO:GO:2000060 GO:GO:0045746 GO:GO:0031146 GO:GO:0007062 KO:K10260
EMBL:AY033553 EMBL:AF383178 EMBL:AY008274 EMBL:AF411971
EMBL:AF411972 EMBL:AY049984 EMBL:AK001933 EMBL:CR749305
EMBL:BC037320 EMBL:BC117244 EMBL:BC117246 EMBL:BC143944
IPI:IPI00056349 IPI:IPI00059165 IPI:IPI00075075 IPI:IPI00402151
RefSeq:NP_001013433.1 RefSeq:NP_060785.2 RefSeq:NP_361014.1
UniGene:Hs.561245 UniGene:Hs.717081 PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR ProteinModelPortal:Q969H0
SMR:Q969H0 DIP:DIP-27613N IntAct:Q969H0 MINT:MINT-276696
STRING:Q969H0 PhosphoSite:Q969H0 DMDM:44887885 PaxDb:Q969H0
PRIDE:Q969H0 DNASU:55294 Ensembl:ENST00000263981
Ensembl:ENST00000281708 Ensembl:ENST00000296555 GeneID:55294
KEGG:hsa:55294 UCSC:uc003imq.3 UCSC:uc003imr.3 UCSC:uc003ims.3
CTD:55294 GeneCards:GC04M153242 HGNC:HGNC:16712 HPA:CAB013793
HPA:CAB029987 MIM:606278 neXtProt:NX_Q969H0 PharmGKB:PA28054
HOVERGEN:HBG051596 InParanoid:Q969H0 OMA:EECLHTL OrthoDB:EOG4MKNFW
PhylomeDB:Q969H0 EvolutionaryTrace:Q969H0 GenomeRNAi:55294
NextBio:59488 ArrayExpress:Q969H0 Bgee:Q969H0 CleanEx:HS_FBXW7
Genevestigator:Q969H0 GermOnline:ENSG00000109670 GO:GO:2000346
GO:GO:2000639 GO:GO:0010868 Uniprot:Q969H0
Length = 707
Score = 349 (127.9 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 73/205 (35%), Positives = 121/205 (59%)
Query: 23 LAGHTK-AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
L GH ++ ++F G + S S D +K+W A GK +T+ GH G+ WSS
Sbjct: 376 LKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV----WSSQM 429
Query: 82 R--LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
R +++SGS D+TLK+W +G+C+ TL GH++ V C + + + +VSGS D ++R+WD
Sbjct: 430 RDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWD 487
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
+ TG+CL L H V V + DG +VS +YD + ++WD + CL TL N
Sbjct: 488 IETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVY 545
Query: 200 SFVKFSPNGKYILAATLDNTLKLWD 224
S ++F +G ++++ +LD ++++WD
Sbjct: 546 S-LQF--DGIHVVSGSLDTSIRVWD 567
Score = 321 (118.1 bits), Expect = 5.8e-28, P = 5.8e-28
Identities = 71/207 (34%), Positives = 116/207 (56%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GHT V + + + + S S D +++W G+ + GH + V + D
Sbjct: 456 TLYGHTSTVRCMHL--HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DG 511
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
R +VSG+ D +K+W+ + CL TL+GH+N V+ F+ +VSGS D S+R+WDV
Sbjct: 512 RRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVWDVE 569
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN--PPV 199
TG C+ TL H S + +D +++VS + D +IWD +GQCL+TL + V
Sbjct: 570 TGNCIHTLTGHQSLTSGMEL-KD-NILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAV 627
Query: 200 SFVKFSPNGKYILAATLDNTLKLWDSK 226
+ ++F+ N +++ ++ D T+KLWD K
Sbjct: 628 TCLQFNKN--FVITSSDDGTVKLWDLK 652
Score = 314 (115.6 bits), Expect = 3.3e-27, P = 3.3e-27
Identities = 70/205 (34%), Positives = 111/205 (54%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GHT V S + N + S S D+ +K+W A G+ T+ GH +
Sbjct: 416 TLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVR--CMHLHE 471
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
+ +VSGS D TL++W++ +G+CL L GH V C ++ + +VSG++D V++WD
Sbjct: 472 KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR--VVSGAYDFMVKVWDPE 529
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 201
T CL TL H++ V ++ F DG +VS S D R+WD +G C+ TL + S
Sbjct: 530 TETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSL-TSG 586
Query: 202 VKFSPNGKYILAATLDNTLKLWDSK 226
++ N +++ D+T+K+WD K
Sbjct: 587 MELKDN--ILVSGNADSTVKIWDIK 609
Score = 283 (104.7 bits), Expect = 7.3e-24, P = 7.3e-24
Identities = 60/176 (34%), Positives = 97/176 (55%)
Query: 54 WGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNY 113
W + K K + GH + +R+ VSGSDD TLK+W +GKCL+TL GH+
Sbjct: 365 WRRGELKSPKVLKGHDDHVITCLQFCGNRI-VSGSDDNTLKVWSAVTGKCLRTLVGHTGG 423
Query: 114 VFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY 173
V+ + N+I+SGS D ++++W+ TG+C+ TL H+ V +H + +VS S
Sbjct: 424 VWSSQM--RDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE--KRVVSGSR 479
Query: 174 DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVT 229
D R+WD +GQCL L+ V V++ +G+ +++ D +K+WD + T
Sbjct: 480 DATLRVWDIETGQCLHVLMGHV-AAVRCVQY--DGRRVVSGAYDFMVKVWDPETET 532
Score = 272 (100.8 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 54/173 (31%), Positives = 100/173 (57%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
L GH AV V++ +G + S + D ++K+W T+ GH + + + D
Sbjct: 497 LMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGI 552
Query: 83 LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 142
+VSGS D ++++W++ +G C+ TL GH + + N++VSG+ D +V+IWD++T
Sbjct: 553 HVVSGSLDTSIRVWDVETGNCIHTLTGHQSLT--SGMELKDNILVSGNADSTVKIWDIKT 610
Query: 143 GKCLKTLPA---HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLI 192
G+CL+TL H V+ + FN++ +++SS DG ++WD +G+ ++ L+
Sbjct: 611 GQCLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKTGEFIRNLV 661
Score = 228 (85.3 bits), Expect = 6.1e-18, P = 6.1e-18
Identities = 48/131 (36%), Positives = 80/131 (61%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GHT V S++F +G + S S D I++W G T++GH+ S + +
Sbjct: 536 TLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN- 592
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKG---HSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
+LVSG+ D T+KIW++ +G+CL+TL+G H + V C FN N +++ S D +V++W
Sbjct: 593 -ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLW 649
Query: 139 DVRTGKCLKTL 149
D++TG+ ++ L
Sbjct: 650 DLKTGEFIRNL 660
>SGD|S000000379 [details] [associations]
symbol:SWD3 "Essential subunit of the COMPASS (Set1C)
complex" species:4932 "Saccharomyces cerevisiae" [GO:0005694
"chromosome" evidence=IEA] [GO:0051568 "histone H3-K4 methylation"
evidence=IMP;IDA] [GO:0048188 "Set1C/COMPASS complex" evidence=IPI]
[GO:0042800 "histone methyltransferase activity (H3-K4 specific)"
evidence=IDA;IMP] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0005634 "nucleus" evidence=IEA] [GO:0000781
"chromosome, telomeric region" evidence=IEA] [GO:0000723 "telomere
maintenance" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000000379 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 EMBL:BK006936
GO:GO:0006348 GO:GO:0048188 GO:GO:0051568 GO:GO:0000781
GO:GO:0000723 KO:K14963 OrthoDB:EOG49CTJ0 EMBL:Z36043 EMBL:AY693212
PIR:S46046 RefSeq:NP_009734.1 ProteinModelPortal:P38123 SMR:P38123
DIP:DIP-1754N IntAct:P38123 MINT:MINT-393581 STRING:P38123
PaxDb:P38123 PeptideAtlas:P38123 EnsemblFungi:YBR175W GeneID:852472
KEGG:sce:YBR175W CYGD:YBR175w HOGENOM:HOG000091642 OMA:IRIWCAR
NextBio:971432 Genevestigator:P38123 GermOnline:YBR175W
Uniprot:P38123
Length = 315
Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 77/200 (38%), Positives = 116/200 (58%)
Query: 34 KFSPNGEWLASSSADKLIKIWGAYDGKFEKT-ISGHKLGISDVAWSSDSRLLVSGSDDKT 92
K SP+G++LA + ++ I+ +T ++ H S++ WS D + + + SDD +
Sbjct: 20 KISPDGQFLAITQGLNIL-IYDINRRTVSQTLVTSHARPFSELCWSPDGQCIATASDDFS 78
Query: 93 LKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAH 152
++I LS G L T GH+ V FN + NL+ + S DES++IWD G +KT+ AH
Sbjct: 79 VEIIHLSYG-LLHTFIGHTAPVISLTFNRKGNLLFTSSMDESIKIWDTLNGSLMKTISAH 137
Query: 153 SDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD-----DNP--PVSFVKF 204
S+ V +V D S++ S SYDGL RI+D +G CLKTL D +N P+S VKF
Sbjct: 138 SEAVVSVDVPMNDSSILSSGSYDGLIRIFDAETGHCLKTLTYDKDWKRENGVVPISQVKF 197
Query: 205 SPNGKYILAATLDNTLKLWD 224
S N +Y+L +LD +K+WD
Sbjct: 198 SENARYLLVKSLDGVVKIWD 217
Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 54/177 (30%), Positives = 93/177 (52%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
+ H + S + +SP+G+ +A++S D ++I G T GH + + ++
Sbjct: 51 VTSHARPFSELCWSPDGQCIATASDDFSVEIIHLSYGLLH-TFIGHTAPVISLTFNRKGN 109
Query: 83 LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVR 141
LL + S D+++KIW+ +G +KT+ HS V + S+++ SGS+D +RI+D
Sbjct: 110 LLFTSSMDESIKIWDTLNGSLMKTISAHSEAVVSVDVPMNDSSILSSGSYDGLIRIFDAE 169
Query: 142 TGKCLKTLPAHSD--------PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 190
TG CLKTL D P+S V F+ + ++ S DG+ +IWD G ++T
Sbjct: 170 TGHCLKTLTYDKDWKRENGVVPISQVKFSENARYLLVKSLDGVVKIWDCIGGCVVRT 226
Score = 182 (69.1 bits), Expect = 7.8e-14, P = 7.8e-14
Identities = 48/141 (34%), Positives = 71/141 (50%)
Query: 17 YVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV- 75
Y L T GHT V S+ F+ G L +SS D+ IKIW +G KTIS H + V
Sbjct: 86 YGLLHTFIGHTAPVISLTFNRKGNLLFTSSMDESIKIWDTLNGSLMKTISAHSEAVVSVD 145
Query: 76 AWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNY--------VFCCNFNPQSNLIV 127
+DS +L SGS D ++I++ +G CLKTL ++ + F+ + ++
Sbjct: 146 VPMNDSSILSSGSYDGLIRIFDAETGHCLKTLTYDKDWKRENGVVPISQVKFSENARYLL 205
Query: 128 SGSFDESVRIWDVRTGKCLKT 148
S D V+IWD G ++T
Sbjct: 206 VKSLDGVVKIWDCIGGCVVRT 226
Score = 147 (56.8 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 54/182 (29%), Positives = 90/182 (49%)
Query: 22 TLAGHTKAVSSVKFSPN-GEWLASSSADKLIKIWGAYDGKFEKTISGHK--------LGI 72
T++ H++AV SV N L+S S D LI+I+ A G KT++ K + I
Sbjct: 133 TISAHSEAVVSVDVPMNDSSILSSGSYDGLIRIFDAETGHCLKTLTYDKDWKRENGVVPI 192
Query: 73 SDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTL------KGHSNYVFCCNF-NPQSN- 124
S V +S ++R L+ S D +KIW+ G ++T KG ++ +F NP+
Sbjct: 193 SQVKFSENARYLLVKSLDGVVKIWDCIGGCVVRTFQVQPLEKGVLHHSCGMDFLNPEDGS 252
Query: 125 --LIVSGSFDESVRIWDVRTGKCLKTLPA----HSDPVSAVHFNRDGSLIVSSSYDGLCR 178
L++SG + + W+ T L+ L HS PV ++H G+++ S + +G C
Sbjct: 253 TPLVISGYENGDIYCWNSDTKSLLQLLDGSLYHHSSPVMSIHCF--GNIMCSLALNGDCC 310
Query: 179 IW 180
+W
Sbjct: 311 LW 312
Score = 140 (54.3 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 44/152 (28%), Positives = 77/152 (50%)
Query: 78 SSDSRLLVSGSDDKTLKIWELSSGKCLKTL-KGHSN-YVFCCNFNPQSNLIVSGSFDESV 135
S D + L + + I++++ +TL H+ + C ++P I + S D SV
Sbjct: 22 SPDGQFLAI-TQGLNILIYDINRRTVSQTLVTSHARPFSELC-WSPDGQCIATASDDFSV 79
Query: 136 RIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD 195
I + G L T H+ PV ++ FNR G+L+ +SS D +IWDT +G +KT+
Sbjct: 80 EIIHLSYG-LLHTFIGHTAPVISLTFNRKGNLLFTSSMDESIKIWDTLNGSLMKTISAHS 138
Query: 196 NPPVSFVKFSPNGKYILAA-TLDNTLKLWDSK 226
VS V N IL++ + D ++++D++
Sbjct: 139 EAVVS-VDVPMNDSSILSSGSYDGLIRIFDAE 169
>UNIPROTKB|E2QUZ3 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070374 "positive regulation of ERK1 and
ERK2 cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 OMA:EECLHTL EMBL:AAEX03010045 RefSeq:XP_867701.2
Ensembl:ENSCAFT00000012962 GeneID:475465 KEGG:cfa:475465
NextBio:20851305 Uniprot:E2QUZ3
Length = 712
Score = 349 (127.9 bits), Expect = 5.5e-31, P = 5.5e-31
Identities = 73/205 (35%), Positives = 121/205 (59%)
Query: 23 LAGHTK-AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
L GH ++ ++F G + S S D +K+W A GK +T+ GH G+ WSS
Sbjct: 381 LKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV----WSSQM 434
Query: 82 R--LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
R +++SGS D+TLK+W +G+C+ TL GH++ V C + + + +VSGS D ++R+WD
Sbjct: 435 RDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWD 492
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
+ TG+CL L H V V + DG +VS +YD + ++WD + CL TL N
Sbjct: 493 IETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVY 550
Query: 200 SFVKFSPNGKYILAATLDNTLKLWD 224
S ++F +G ++++ +LD ++++WD
Sbjct: 551 S-LQF--DGIHVVSGSLDTSIRVWD 572
Score = 321 (118.1 bits), Expect = 5.9e-28, P = 5.9e-28
Identities = 71/207 (34%), Positives = 116/207 (56%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GHT V + + + + S S D +++W G+ + GH + V + D
Sbjct: 461 TLYGHTSTVRCMHL--HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DG 516
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
R +VSG+ D +K+W+ + CL TL+GH+N V+ F+ +VSGS D S+R+WDV
Sbjct: 517 RRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVWDVE 574
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN--PPV 199
TG C+ TL H S + +D +++VS + D +IWD +GQCL+TL + V
Sbjct: 575 TGNCIHTLTGHQSLTSGMEL-KD-NILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAV 632
Query: 200 SFVKFSPNGKYILAATLDNTLKLWDSK 226
+ ++F+ N +++ ++ D T+KLWD K
Sbjct: 633 TCLQFNKN--FVITSSDDGTVKLWDLK 657
Score = 314 (115.6 bits), Expect = 3.4e-27, P = 3.4e-27
Identities = 70/205 (34%), Positives = 111/205 (54%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GHT V S + N + S S D+ +K+W A G+ T+ GH +
Sbjct: 421 TLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVR--CMHLHE 476
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
+ +VSGS D TL++W++ +G+CL L GH V C ++ + +VSG++D V++WD
Sbjct: 477 KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR--VVSGAYDFMVKVWDPE 534
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 201
T CL TL H++ V ++ F DG +VS S D R+WD +G C+ TL + S
Sbjct: 535 TETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSL-TSG 591
Query: 202 VKFSPNGKYILAATLDNTLKLWDSK 226
++ N +++ D+T+K+WD K
Sbjct: 592 MELKDN--ILVSGNADSTVKIWDIK 614
Score = 283 (104.7 bits), Expect = 7.4e-24, P = 7.4e-24
Identities = 60/176 (34%), Positives = 97/176 (55%)
Query: 54 WGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNY 113
W + K K + GH + +R+ VSGSDD TLK+W +GKCL+TL GH+
Sbjct: 370 WRRGELKSPKVLKGHDDHVITCLQFCGNRI-VSGSDDNTLKVWSAVTGKCLRTLVGHTGG 428
Query: 114 VFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY 173
V+ + N+I+SGS D ++++W+ TG+C+ TL H+ V +H + +VS S
Sbjct: 429 VWSSQM--RDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE--KRVVSGSR 484
Query: 174 DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVT 229
D R+WD +GQCL L+ V V++ +G+ +++ D +K+WD + T
Sbjct: 485 DATLRVWDIETGQCLHVLMGHV-AAVRCVQY--DGRRVVSGAYDFMVKVWDPETET 537
Score = 272 (100.8 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 54/173 (31%), Positives = 100/173 (57%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
L GH AV V++ +G + S + D ++K+W T+ GH + + + D
Sbjct: 502 LMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGI 557
Query: 83 LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 142
+VSGS D ++++W++ +G C+ TL GH + + N++VSG+ D +V+IWD++T
Sbjct: 558 HVVSGSLDTSIRVWDVETGNCIHTLTGHQSLT--SGMELKDNILVSGNADSTVKIWDIKT 615
Query: 143 GKCLKTLPA---HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLI 192
G+CL+TL H V+ + FN++ +++SS DG ++WD +G+ ++ L+
Sbjct: 616 GQCLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKTGEFIRNLV 666
Score = 228 (85.3 bits), Expect = 6.1e-18, P = 6.1e-18
Identities = 48/131 (36%), Positives = 80/131 (61%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GHT V S++F +G + S S D I++W G T++GH+ S + +
Sbjct: 541 TLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN- 597
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKG---HSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
+LVSG+ D T+KIW++ +G+CL+TL+G H + V C FN N +++ S D +V++W
Sbjct: 598 -ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLW 654
Query: 139 DVRTGKCLKTL 149
D++TG+ ++ L
Sbjct: 655 DLKTGEFIRNL 665
>ZFIN|ZDB-GENE-090313-79 [details] [associations]
symbol:fbxw7 "F-box and WD repeat domain containing
7" species:7955 "Danio rerio" [GO:0045746 "negative regulation of
Notch signaling pathway" evidence=IMP] [GO:0001525 "angiogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
ZFIN:ZDB-GENE-090313-79 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0001525 SUPFAM:SSF81383 GO:GO:0045746
GeneTree:ENSGT00690000101849 EMBL:AL953881 IPI:IPI00499035
Ensembl:ENSDART00000086512 Bgee:F1RCB5 Uniprot:F1RCB5
Length = 760
Score = 349 (127.9 bits), Expect = 6.6e-31, P = 6.6e-31
Identities = 73/205 (35%), Positives = 121/205 (59%)
Query: 23 LAGHTK-AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
L GH ++ ++F G + S S D +K+W A GK +T+ GH G+ WSS
Sbjct: 429 LKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV----WSSQM 482
Query: 82 R--LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
R +++SGS D+TLK+W +G+C+ TL GH++ V C + + + +VSGS D ++R+WD
Sbjct: 483 RDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWD 540
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
+ TG+CL L H V V + DG +VS +YD + ++WD + CL TL N
Sbjct: 541 IETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVY 598
Query: 200 SFVKFSPNGKYILAATLDNTLKLWD 224
S ++F +G ++++ +LD ++++WD
Sbjct: 599 S-LQF--DGIHVVSGSLDTSIRVWD 620
Score = 316 (116.3 bits), Expect = 2.4e-27, P = 2.4e-27
Identities = 70/205 (34%), Positives = 114/205 (55%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GHT V + + + + S S D +++W G+ + GH + V + D
Sbjct: 509 TLYGHTSTVRCMHL--HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DG 564
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
R +VSG+ D +K+W+ + CL TL+GH+N V+ F+ +VSGS D S+R+WDV
Sbjct: 565 RRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVWDVE 622
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN--PPV 199
TG C+ TL H S + +D +++VS + D +IWD +GQCL+TL V
Sbjct: 623 TGNCIHTLTGHQSLTSGMEL-KD-NILVSGNADSTVKIWDIKTGQCLQTLQGPHKHQSAV 680
Query: 200 SFVKFSPNGKYILAATLDNTLKLWD 224
+ ++F+ N +++ ++ D T+KLWD
Sbjct: 681 TCLQFNKN--FVITSSDDGTVKLWD 703
Score = 314 (115.6 bits), Expect = 3.9e-27, P = 3.9e-27
Identities = 70/205 (34%), Positives = 111/205 (54%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GHT V S + N + S S D+ +K+W A G+ T+ GH +
Sbjct: 469 TLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVR--CMHLHE 524
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
+ +VSGS D TL++W++ +G+CL L GH V C ++ + +VSG++D V++WD
Sbjct: 525 KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR--VVSGAYDFMVKVWDPE 582
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 201
T CL TL H++ V ++ F DG +VS S D R+WD +G C+ TL + S
Sbjct: 583 TETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSL-TSG 639
Query: 202 VKFSPNGKYILAATLDNTLKLWDSK 226
++ N +++ D+T+K+WD K
Sbjct: 640 MELKDN--ILVSGNADSTVKIWDIK 662
Score = 287 (106.1 bits), Expect = 3.2e-24, P = 3.2e-24
Identities = 61/176 (34%), Positives = 97/176 (55%)
Query: 54 WGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNY 113
W D K K + GH + +R+ VSGSDD TLK+W +GKCL+TL GH+
Sbjct: 418 WRRGDLKSPKVLKGHDDHVITCLQFCGNRI-VSGSDDNTLKVWSAVTGKCLRTLVGHTGG 476
Query: 114 VFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY 173
V+ + N+I+SGS D ++++W+ TG+C+ TL H+ V +H + +VS S
Sbjct: 477 VWSSQM--RDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE--KRVVSGSR 532
Query: 174 DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVT 229
D R+WD +GQCL L+ V V++ +G+ +++ D +K+WD + T
Sbjct: 533 DATLRVWDIETGQCLHVLMGHV-AAVRCVQY--DGRRVVSGAYDFMVKVWDPETET 585
Score = 272 (100.8 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 54/173 (31%), Positives = 100/173 (57%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
L GH AV V++ +G + S + D ++K+W T+ GH + + + D
Sbjct: 550 LMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGI 605
Query: 83 LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 142
+VSGS D ++++W++ +G C+ TL GH + + N++VSG+ D +V+IWD++T
Sbjct: 606 HVVSGSLDTSIRVWDVETGNCIHTLTGHQSLT--SGMELKDNILVSGNADSTVKIWDIKT 663
Query: 143 GKCLKTLPA---HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLI 192
G+CL+TL H V+ + FN++ +++SS DG ++WD +G+ ++ L+
Sbjct: 664 GQCLQTLQGPHKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLRTGEFIRNLV 714
Score = 231 (86.4 bits), Expect = 3.3e-18, P = 3.3e-18
Identities = 49/131 (37%), Positives = 80/131 (61%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GHT V S++F +G + S S D I++W G T++GH+ S + +
Sbjct: 589 TLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN- 645
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKG---HSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
+LVSG+ D T+KIW++ +G+CL+TL+G H + V C FN N +++ S D +V++W
Sbjct: 646 -ILVSGNADSTVKIWDIKTGQCLQTLQGPHKHQSAVTCLQFN--KNFVITSSDDGTVKLW 702
Query: 139 DVRTGKCLKTL 149
D+RTG+ ++ L
Sbjct: 703 DLRTGEFIRNL 713
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
Identities = 71/205 (34%), Positives = 113/205 (55%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKLGISDVAWSS 79
+ L GH AV V+FSP+G +AS S DK + +W K E T+ H + V +SS
Sbjct: 56 YCLVGHKDAVMCVQFSPSGHLVASGSRDKTVCLW-VPSVKGESTVFKAHTATVRSVHFSS 114
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
D + LV+ SDDKT+K+W + K L +L H N+V C F+P LI S S D++V++WD
Sbjct: 115 DGQSLVTASDDKTIKVWTVHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWD 174
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
+ +C+ + H + V F+ G+ I ++ D ++WD + L+ V
Sbjct: 175 KTSRECIHSFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHY-QVHTAAV 233
Query: 200 SFVKFSPNGKYILAATLDNTLKLWD 224
+ + F P+G Y++ A+ D+TLK+ D
Sbjct: 234 NSLSFHPSGNYLITASNDSTLKILD 258
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 63/198 (31%), Positives = 107/198 (54%)
Query: 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV 85
HT V SV FS +G+ L ++S DK IK+W + KF ++S H + +S D RL+
Sbjct: 103 HTATVRSVHFSSDGQSLVTASDDKTIKVWTVHRQKFLFSLSQHINWVRCARFSPDGRLIA 162
Query: 86 SGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 145
S SDDKT+K+W+ +S +C+ + H + F+P I + D++V++WDVR +
Sbjct: 163 SASDDKTVKLWDKTSRECIHSFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVWDVRMNRL 222
Query: 146 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 205
L+ H+ V+++ F+ G+ ++++S D +I D G+ L TL P + V FS
Sbjct: 223 LQHYQVHTAAVNSLSFHPSGNYLITASNDSTLKILDLLEGRLLYTLHGHQGP-ATCVAFS 281
Query: 206 PNGKYILAATLDNTLKLW 223
G + + D + +W
Sbjct: 282 RTGDFFASGGSDEQVMVW 299
Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 70/204 (34%), Positives = 109/204 (53%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLL 84
GH A++SV FS N + LAS S D +KIW + GHK + V +S L+
Sbjct: 18 GHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCVQFSPSGHLV 77
Query: 85 VSGSDDKTLKIWELSSGKCLKTL-KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 143
SGS DKT+ +W + S K T+ K H+ V +F+ +V+ S D+++++W V
Sbjct: 78 ASGSRDKTVCLW-VPSVKGESTVFKAHTATVRSVHFSSDGQSLVTASDDKTIKVWTVHRQ 136
Query: 144 KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK 203
K L +L H + V F+ DG LI S+S D ++WD S +C+ + + + V+
Sbjct: 137 KFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCEHGGF-ANHVE 195
Query: 204 FSPNGKYILAATLDNTLKLWDSKV 227
F P+G I AA D T+K+WD ++
Sbjct: 196 FHPSGTCIAAAGTDKTVKVWDVRM 219
Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 61/168 (36%), Positives = 93/168 (55%)
Query: 58 DGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCC 117
D E+ GH+ I+ V +S + + L SGS D LKIW + L GH + V C
Sbjct: 9 DPSLERHFRGHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCV 68
Query: 118 NFNPQSNLIVSGSFDESVRIWDVRTGKCLKTL-PAHSDPVSAVHFNRDGSLIVSSSYDGL 176
F+P +L+ SGS D++V +W V + K T+ AH+ V +VHF+ DG +V++S D
Sbjct: 69 QFSPSGHLVASGSRDKTVCLW-VPSVKGESTVFKAHTATVRSVHFSSDGQSLVTASDDKT 127
Query: 177 CRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
++W + L +L N V +FSP+G+ I +A+ D T+KLWD
Sbjct: 128 IKVWTVHRQKFLFSLSQHINW-VRCARFSPDGRLIASASDDKTVKLWD 174
Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
Identities = 46/162 (28%), Positives = 81/162 (50%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 80
F+L+ H V +FSP+G +AS+S DK +K+W + + H + V +
Sbjct: 140 FSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCEHGGFANHVEFHPS 199
Query: 81 SRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 140
+ + DKT+K+W++ + L+ + H+ V +F+P N +++ S D +++I D+
Sbjct: 200 GTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSLSFHPSGNYLITASNDSTLKILDL 259
Query: 141 RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 182
G+ L TL H P + V F+R G S D +W T
Sbjct: 260 LEGRLLYTLHGHQGPATCVAFSRTGDFFASGGSDEQVMVWKT 301
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 70/205 (34%), Positives = 111/205 (54%)
Query: 20 KFT-LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
KF+ HT V SV FS +G++LA++S DK IK+W Y +F ++ H + +S
Sbjct: 94 KFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFS 153
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
D RL+VS S+DKT+KIW+ ++ +C+ + +FNP I S D++V++W
Sbjct: 154 PDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVW 213
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 198
DVR K L+ HS V+ + F+ G+ ++++S DG +I D G+ + TL P
Sbjct: 214 DVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTL-QGHTGP 272
Query: 199 VSFVKFSPNGKYILAATLDNTLKLW 223
V V FS G+ + D + LW
Sbjct: 273 VFTVSFSKGGELFASGGADTQVLLW 297
Score = 325 (119.5 bits), Expect = 3.0e-29, P = 3.0e-29
Identities = 66/205 (32%), Positives = 113/205 (55%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW-GAYDGKFEKTISGHKLGISDVAWSS 79
+ GH V+SV+FSP+G LAS+S D+ +++W GKF + H + V +S+
Sbjct: 54 YRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSE-FKAHTAPVRSVDFSA 112
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
D + L + S+DK++K+W + + L +L H+++V C F+P LIVS S D++++IWD
Sbjct: 113 DGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWD 172
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
+C+ + V FN G+ I S+ D ++WD + L+ + V
Sbjct: 173 TTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHY-QVHSGGV 231
Query: 200 SFVKFSPNGKYILAATLDNTLKLWD 224
+ + F P+G Y++ A+ D TLK+ D
Sbjct: 232 NCISFHPSGNYLITASSDGTLKILD 256
Score = 302 (111.4 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 68/210 (32%), Positives = 108/210 (51%)
Query: 18 VLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW 77
VL+ GH A++S+ SPNG+ LA++S D + +W GHK ++ V +
Sbjct: 9 VLERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQF 68
Query: 78 SSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 137
S LL S S D+T+++W K H+ V +F+ + + S D+S+++
Sbjct: 69 SPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKV 128
Query: 138 WDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 197
W + + L +L H+ V F+ DG LIVS S D +IWDT + QC+ D
Sbjct: 129 WSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGF 188
Query: 198 PVSFVKFSPNGKYILAATLDNTLKLWDSKV 227
+FV F+P+G I +A D T+K+WD +V
Sbjct: 189 -ANFVDFNPSGTCIASAGSDQTVKVWDVRV 217
Score = 244 (91.0 bits), Expect = 4.5e-20, P = 4.5e-20
Identities = 52/163 (31%), Positives = 86/163 (52%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISD-VAWSS 79
++L HT V KFSP+G + S S DK IKIW + + S +G ++ V ++
Sbjct: 138 YSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSD-SVGFANFVDFNP 196
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
+ S D+T+K+W++ K L+ + HS V C +F+P N +++ S D +++I D
Sbjct: 197 SGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILD 256
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 182
+ G+ + TL H+ PV V F++ G L S D +W T
Sbjct: 257 LLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLWRT 299
Score = 226 (84.6 bits), Expect = 4.3e-18, P = 4.3e-18
Identities = 54/170 (31%), Positives = 85/170 (50%)
Query: 58 DGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCC 117
D E+ GHK I+ + S + + L + S D L +W GH + V
Sbjct: 7 DPVLERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSV 66
Query: 118 NFNPQSNLIVSGSFDESVRIW--DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 175
F+P NL+ S S D +VR+W D R GK AH+ PV +V F+ DG + ++S D
Sbjct: 67 QFSPHGNLLASASRDRTVRLWIPDKR-GK-FSEFKAHTAPVRSVDFSADGQFLATASEDK 124
Query: 176 LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225
++W + L +L + V KFSP+G+ I++ + D T+K+WD+
Sbjct: 125 SIKVWSMYRQRFLYSLYRHTHW-VRCAKFSPDGRLIVSCSEDKTIKIWDT 173
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 70/205 (34%), Positives = 111/205 (54%)
Query: 20 KFT-LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
KF+ HT V SV FS +G++LA++S DK IK+W Y +F ++ H + +S
Sbjct: 52 KFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFS 111
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
D RL+VS S+DKT+KIW+ ++ +C+ + +FNP I S D++V++W
Sbjct: 112 PDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVW 171
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 198
DVR K L+ HS V+ + F+ G+ ++++S DG +I D G+ + TL P
Sbjct: 172 DVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTL-QGHTGP 230
Query: 199 VSFVKFSPNGKYILAATLDNTLKLW 223
V V FS G+ + D + LW
Sbjct: 231 VFTVSFSKGGELFASGGADTQVLLW 255
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 66/205 (32%), Positives = 113/205 (55%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW-GAYDGKFEKTISGHKLGISDVAWSS 79
+ GH V+SV+FSP+G LAS+S D+ +++W GKF + H + V +S+
Sbjct: 12 YRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSE-FKAHTAPVRSVDFSA 70
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
D + L + S+DK++K+W + + L +L H+++V C F+P LIVS S D++++IWD
Sbjct: 71 DGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWD 130
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
+C+ + V FN G+ I S+ D ++WD + L+ + V
Sbjct: 131 TTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHY-QVHSGGV 189
Query: 200 SFVKFSPNGKYILAATLDNTLKLWD 224
+ + F P+G Y++ A+ D TLK+ D
Sbjct: 190 NCISFHPSGNYLITASSDGTLKILD 214
Score = 244 (91.0 bits), Expect = 3.2e-20, P = 3.2e-20
Identities = 52/163 (31%), Positives = 86/163 (52%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISD-VAWSS 79
++L HT V KFSP+G + S S DK IKIW + + S +G ++ V ++
Sbjct: 96 YSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSD-SVGFANFVDFNP 154
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
+ S D+T+K+W++ K L+ + HS V C +F+P N +++ S D +++I D
Sbjct: 155 SGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILD 214
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 182
+ G+ + TL H+ PV V F++ G L S D +W T
Sbjct: 215 LLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLWRT 257
Score = 241 (89.9 bits), Expect = 7.0e-20, P = 7.0e-20
Identities = 53/161 (32%), Positives = 84/161 (52%)
Query: 67 GHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLI 126
GHK ++ V +S LL S S D+T+++W K H+ V +F+ +
Sbjct: 16 GHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFL 75
Query: 127 VSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 186
+ S D+S+++W + + L +L H+ V F+ DG LIVS S D +IWDT + Q
Sbjct: 76 ATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQ 135
Query: 187 CLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKV 227
C+ D +FV F+P+G I +A D T+K+WD +V
Sbjct: 136 CVNNFSDSVGF-ANFVDFNPSGTCIASAGSDQTVKVWDVRV 175
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 70/198 (35%), Positives = 107/198 (54%)
Query: 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV 85
HT V SV FS +G++LA++S DK IK+W Y +F ++ H + +S D RL+V
Sbjct: 101 HTAPVRSVDFSADGQFLATASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIV 160
Query: 86 SGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 145
S S+DKT+KIW+ ++ +C+ + +FNP I S D +V+IWD+R K
Sbjct: 161 SCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHTVKIWDIRVNKL 220
Query: 146 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 205
L+ HS V+ V F+ G+ I+++S DG +I D G+ + TL PV V FS
Sbjct: 221 LQHYQVHSGGVNCVSFHPSGNYIITASSDGTLKILDLLEGRLIYTL-QGHTGPVFTVSFS 279
Query: 206 PNGKYILAATLDNTLKLW 223
G+ + D + LW
Sbjct: 280 KGGELFSSGGADTQVLLW 297
Score = 320 (117.7 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 69/205 (33%), Positives = 112/205 (54%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW-GAYDGKFEKTISGHKLGISDVAWSS 79
F GH V+SV+FSP G LAS+S D+ +++W GK + H + V +S+
Sbjct: 54 FRYVGHKDVVTSVQFSPLGNLLASASRDRTVRLWIPDKRGKSSE-FKAHTAPVRSVDFSA 112
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
D + L + S+DK++K+W + + L +L H+++V C F+P LIVS S D++++IWD
Sbjct: 113 DGQFLATASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWD 172
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
+C+ + V FN +G+ I S+ D +IWD + L+ + V
Sbjct: 173 TTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHY-QVHSGGV 231
Query: 200 SFVKFSPNGKYILAATLDNTLKLWD 224
+ V F P+G YI+ A+ D TLK+ D
Sbjct: 232 NCVSFHPSGNYIITASSDGTLKILD 256
Score = 311 (114.5 bits), Expect = 1.4e-27, P = 1.4e-27
Identities = 72/211 (34%), Positives = 114/211 (54%)
Query: 18 VLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW 77
VL+ GH A++SV FSP+G+ LA++S D + +W GHK ++ V +
Sbjct: 9 VLERYFKGHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYVGHKDVVTSVQF 68
Query: 78 SSDSRLLVSGSDDKTLKIWELSS-GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 136
S LL S S D+T+++W GK + K H+ V +F+ + + S D+S++
Sbjct: 69 SPLGNLLASASRDRTVRLWIPDKRGKSSE-FKAHTAPVRSVDFSADGQFLATASEDKSIK 127
Query: 137 IWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 196
+W++ + L +L H+ V F+ DG LIVS S D +IWDT + QC+ D
Sbjct: 128 VWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVG 187
Query: 197 PPVSFVKFSPNGKYILAATLDNTLKLWDSKV 227
+FV F+PNG I +A D+T+K+WD +V
Sbjct: 188 F-ANFVDFNPNGTCIASAGSDHTVKIWDIRV 217
Score = 245 (91.3 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 54/163 (33%), Positives = 86/163 (52%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISD-VAWSS 79
++L HT V KFSP+G + S S DK IKIW + + S +G ++ V ++
Sbjct: 138 YSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSD-SVGFANFVDFNP 196
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
+ + S D T+KIW++ K L+ + HS V C +F+P N I++ S D +++I D
Sbjct: 197 NGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYIITASSDGTLKILD 256
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 182
+ G+ + TL H+ PV V F++ G L S D +W T
Sbjct: 257 LLEGRLIYTLQGHTGPVFTVSFSKGGELFSSGGADTQVLLWRT 299
Score = 227 (85.0 bits), Expect = 3.3e-18, P = 3.3e-18
Identities = 55/170 (32%), Positives = 87/170 (51%)
Query: 58 DGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCC 117
D E+ GHK I+ V +S + L + S D L +W GH + V
Sbjct: 7 DPVLERYFKGHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYVGHKDVVTSV 66
Query: 118 NFNPQSNLIVSGSFDESVRIW--DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 175
F+P NL+ S S D +VR+W D R GK + AH+ PV +V F+ DG + ++S D
Sbjct: 67 QFSPLGNLLASASRDRTVRLWIPDKR-GKSSE-FKAHTAPVRSVDFSADGQFLATASEDK 124
Query: 176 LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225
++W+ + L +L + V KFSP+G+ I++ + D T+K+WD+
Sbjct: 125 SIKVWNMYRQRFLYSLYRHTHW-VRCAKFSPDGRLIVSCSEDKTIKIWDT 173
>SGD|S000004212 [details] [associations]
symbol:UTP13 "Nucleolar protein" species:4932 "Saccharomyces
cerevisiae" [GO:0005634 "nucleus" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0030686 "90S preribosome"
evidence=IDA] [GO:0030515 "snoRNA binding" evidence=IPI]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0034388
"Pwp2p-containing subcomplex of 90S preribosome" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0032040 "small-subunit processome"
evidence=IEA;IDA] [GO:0000480 "endonucleolytic cleavage in 5'-ETS
of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000472 "endonucleolytic cleavage to generate mature 5'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000004212 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030515
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006945
EMBL:U19027 GO:GO:0032040 GO:GO:0000447 GO:GO:0000472 GO:GO:0000480
GO:GO:0034388 HOGENOM:HOG000188765 KO:K14555
GeneTree:ENSGT00690000102183 OrthoDB:EOG4DZ53K PIR:S51445
RefSeq:NP_013323.1 ProteinModelPortal:Q05946 SMR:Q05946
DIP:DIP-4790N IntAct:Q05946 MINT:MINT-501291 STRING:Q05946
PaxDb:Q05946 PeptideAtlas:Q05946 EnsemblFungi:YLR222C GeneID:850919
KEGG:sce:YLR222C CYGD:YLR222c OMA:ADSKLIR NextBio:967338
Genevestigator:Q05946 GermOnline:YLR222C Uniprot:Q05946
Length = 817
Score = 345 (126.5 bits), Expect = 2.1e-30, P = 2.1e-30
Identities = 75/216 (34%), Positives = 126/216 (58%)
Query: 18 VLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW 77
V ++T H K ++++ SPN A++S DK KIW +G+ E T++ HK G+ DV++
Sbjct: 482 VSEYTRHAHEKDINALSVSPNDSIFATASYDKTCKIWNLENGELEATLANHKRGLWDVSF 541
Query: 78 SSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNF-NPQSNLIVSGSFDESVR 136
+LL + S DKT+KIW L + +KTL+GH+N V C+F N Q LI G+ D ++
Sbjct: 542 CQYDKLLATSSGDKTVKIWSLDTFSVMKTLEGHTNAVQRCSFINKQKQLISCGA-DGLIK 600
Query: 137 IWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCL-------K 189
IWD +G+CLKTL H++ + A+ DG +IVS+ DG+ + W + Q + K
Sbjct: 601 IWDCSSGECLKTLDGHNNRLWALSTMNDGDMIVSADADGVFQFWKDCTEQEIEEEQEKAK 660
Query: 190 TLIDDDNPPVSFV-KFSPNGKYILAATLDNTLKLWD 224
++ + +++ K ++LA TLD+ ++L++
Sbjct: 661 LQVEQEQSLQNYMSKGDWTNAFLLAMTLDHPMRLFN 696
Score = 177 (67.4 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 58/212 (27%), Positives = 99/212 (46%)
Query: 30 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS-GHKLGISDVAWSSDSRLLVSGS 88
++++K +P+G++L S +L+KI+ GK +++ I D S S LL G
Sbjct: 64 ITALKLTPDGQYLTYVSQAQLLKIFHLKTGKVVRSMKISSPSYILDA--DSTSTLLAVGG 121
Query: 89 DDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSN----LIVSGSFDESVRIWDVRTGK 144
D ++ + ++ +G + KGH + F Q N L+ SG + V++WD+ K
Sbjct: 122 TDGSIIVVDIENGYITHSFKGHGGTISSLKFYGQLNSKIWLLASGDTNGMVKVWDLVKRK 181
Query: 145 CLKTLPAHSDPVSAVHF-----NRDGSL-IVSSSYDGLCRIWD-TASGQC--LKTL-IDD 194
CL TL H+ V + N + SL ++S D + +WD +C LKTL ++
Sbjct: 182 CLHTLQEHTSAVRGLDIIEVPDNDEPSLNLLSGGRDDIINLWDFNMKKKCKLLKTLPVNQ 241
Query: 195 DNPPVSFVKFSPNGKYILAATLDNTLKLWDSK 226
F+K + I A D +L DS+
Sbjct: 242 QVESCGFLKDGDGKRIIYTAGGDAIFQLIDSE 273
Score = 147 (56.8 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 51/165 (30%), Positives = 78/165 (47%)
Query: 42 LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW----SSDSRLLVSGSDDKTLKIWE 97
LA D I + +G + GH IS + + +S LL SG + +K+W+
Sbjct: 117 LAVGGTDGSIIVVDIENGYITHSFKGHGGTISSLKFYGQLNSKIWLLASGDTNGMVKVWD 176
Query: 98 LSSGKCLKTLKGHSNYVFCC-------NFNPQSNLIVSGSFDESVRIWDVRTGK-C--LK 147
L KCL TL+ H++ V N P NL+ SG D+ + +WD K C LK
Sbjct: 177 LVKRKCLHTLQEHTSAVRGLDIIEVPDNDEPSLNLL-SGGRDDIINLWDFNMKKKCKLLK 235
Query: 148 TLPAHSDPVSAVHFNRDGS---LIVSSSYDGLCRIWDTASGQCLK 189
TLP + V + F +DG +I ++ D + ++ D+ SG LK
Sbjct: 236 TLPVNQQ-VESCGFLKDGDGKRIIYTAGGDAIFQLIDSESGSVLK 279
>FB|FBgn0036733 [details] [associations]
symbol:U4-U6-60K "U4-U6 small nuclear riboprotein factor 60K"
species:7227 "Drosophila melanogaster" [GO:0005688 "U6 snRNP"
evidence=ISS] [GO:0005687 "U4 snRNP" evidence=ISS] [GO:0008380 "RNA
splicing" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0030532 "small nuclear ribonucleoprotein complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0030621 "U4 snRNA binding" evidence=IDA] [GO:0017070 "U6 snRNA
binding" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0030532
GO:GO:0017070 GO:GO:0030621 InterPro:IPR014906 Pfam:PF08799
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR HSSP:O43172
EMBL:AY061623 RefSeq:NP_648990.1 UniGene:Dm.987 SMR:Q9VVI0
MINT:MINT-295539 STRING:Q9VVI0 EnsemblMetazoa:FBtr0075209
GeneID:39955 KEGG:dme:Dmel_CG6322 UCSC:CG6322-RA CTD:39955
FlyBase:FBgn0036733 InParanoid:Q9VVI0 OrthoDB:EOG4R7SRZ
GenomeRNAi:39955 NextBio:816257 Uniprot:Q9VVI0
Length = 553
Score = 338 (124.0 bits), Expect = 3.2e-30, P = 3.2e-30
Identities = 73/204 (35%), Positives = 117/204 (57%)
Query: 23 LAGHTK-AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS-GHKLGISDVAWSSD 80
+ GH VS V F P+G +LA++ D ++W + K E GH + +++ SD
Sbjct: 348 ITGHMPHRVSKVAFHPSGRFLATACYDSSWRLWDL-EQKTEVLHQEGHAKPVHCLSYHSD 406
Query: 81 SRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 140
+LV+G D ++W+L +G+C+ L+GH VF +F+P I +GS D + +IWD+
Sbjct: 407 GSVLVTGGLDAFGRVWDLRTGRCIMFLEGHLGAVFGVDFSPNGFHIATGSQDNTCKIWDL 466
Query: 141 RTGKCLKTLPAHSDPVSAVHFNRD-GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
R + + T+PAH++ +S V + ++ GS +V+ SYD +IW + Q LKTL DN +
Sbjct: 467 RRRQPVYTIPAHTNLISDVKYQQECGSFLVTCSYDSTTKIWSNKTWQPLKTLQGHDNKVI 526
Query: 200 SFVKFSPNGKYILAATLDNTLKLW 223
S V +PN +YI + D T KLW
Sbjct: 527 S-VDIAPNSQYIATTSFDRTFKLW 549
Score = 285 (105.4 bits), Expect = 2.3e-24, P = 2.3e-24
Identities = 67/221 (30%), Positives = 109/221 (49%)
Query: 19 LKFTLAGHTKAVSSVKFSP-------NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG 71
LK TL GH V V P N +AS D +K+WG + + I+GH
Sbjct: 295 LKQTLRGHASYVGGVALRPGVKADEENVVAMASGGHDGAVKLWGFNNEESIADITGHMPH 354
Query: 72 -ISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 130
+S VA+ R L + D + ++W+L + +GH+ V C +++ +++V+G
Sbjct: 355 RVSKVAFHPSGRFLATACYDSSWRLWDLEQKTEVLHQEGHAKPVHCLSYHSDGSVLVTGG 414
Query: 131 FDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 190
D R+WD+RTG+C+ L H V V F+ +G I + S D C+IWD Q + T
Sbjct: 415 LDAFGRVWDLRTGRCIMFLEGHLGAVFGVDFSPNGFHIATGSQDNTCKIWDLRRRQPVYT 474
Query: 191 LIDDDNPPVSFVKFSPN-GKYILAATLDNTLKLWDSKVVTP 230
+ N +S VK+ G +++ + D+T K+W +K P
Sbjct: 475 IPAHTNL-ISDVKYQQECGSFLVTCSYDSTTKIWSNKTWQP 514
Score = 282 (104.3 bits), Expect = 4.9e-24, P = 4.9e-24
Identities = 67/224 (29%), Positives = 109/224 (48%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW----SSD 80
G T+ VSS FS + L +SS L K+W D + ++T+ GH + VA +D
Sbjct: 259 GDTRPVSSAAFSEDSSLLLTSSWSGLCKLWSVPDCELKQTLRGHASYVGGVALRPGVKAD 318
Query: 81 SRLLV---SGSDDKTLKIWELSSGKCLKTLKGHSNY-VFCCNFNPQSNLIVSGSFDESVR 136
+V SG D +K+W ++ + + + GH + V F+P + + +D S R
Sbjct: 319 EENVVAMASGGHDGAVKLWGFNNEESIADITGHMPHRVSKVAFHPSGRFLATACYDSSWR 378
Query: 137 IWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 196
+WD+ + H+ PV + ++ DGS++V+ D R+WD +G+C+ L +
Sbjct: 379 LWDLEQKTEVLHQEGHAKPVHCLSYHSDGSVLVTGGLDAFGRVWDLRTGRCIMFL-EGHL 437
Query: 197 PPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTPLNL 240
V V FSPNG +I + DNT K+WD + P NL
Sbjct: 438 GAVFGVDFSPNGFHIATGSQDNTCKIWDLRRRQPVYTIPAHTNL 481
Score = 200 (75.5 bits), Expect = 4.0e-15, P = 4.0e-15
Identities = 42/161 (26%), Positives = 79/161 (49%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLL 84
GH K V + + +G L + D ++W G+ + GH + V +S + +
Sbjct: 393 GHAKPVHCLSYHSDGSVLVTGGLDAFGRVWDLRTGRCIMFLEGHLGAVFGVDFSPNGFHI 452
Query: 85 VSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVRTG 143
+GS D T KIW+L + + T+ H+N + + + + +V+ S+D + +IW +T
Sbjct: 453 ATGSQDNTCKIWDLRRRQPVYTIPAHTNLISDVKYQQECGSFLVTCSYDSTTKIWSNKTW 512
Query: 144 KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 184
+ LKTL H + V +V + I ++S+D ++W S
Sbjct: 513 QPLKTLQGHDNKVISVDIAPNSQYIATTSFDRTFKLWSPDS 553
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
Identities = 70/198 (35%), Positives = 106/198 (53%)
Query: 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV 85
HT V SV FS +G++LAS+S DK IK+W Y +F ++ H + +S D RL+V
Sbjct: 101 HTAPVRSVDFSADGQFLASASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIV 160
Query: 86 SGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 145
S S+DKT+KIW+ ++ +C+ + FNP I S D +V+IWD+R K
Sbjct: 161 SCSEDKTIKIWDTTNKQCVNNFSDFVGFANFVAFNPNGTCIASAGSDHTVKIWDIRVNKL 220
Query: 146 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 205
L+ HS V+ V F+ G+ ++++S DG +I D G+ + TL PV V FS
Sbjct: 221 LQHYQVHSGGVNCVSFHPSGNYLITASSDGTLKILDLLEGRLIYTL-QGHTGPVFTVSFS 279
Query: 206 PNGKYILAATLDNTLKLW 223
G+ + D + LW
Sbjct: 280 KGGELFTSGGADAQVLLW 297
Score = 320 (117.7 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 69/205 (33%), Positives = 112/205 (54%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW-GAYDGKFEKTISGHKLGISDVAWSS 79
F GH ++SV+FSP G LAS+S D+ I++W GK + H + V +S+
Sbjct: 54 FRYVGHKDVITSVQFSPLGNLLASASRDRTIRLWIPDKRGKSSE-FKAHTAPVRSVDFSA 112
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
D + L S S+DK++K+W + + L +L H+++V C F+P LIVS S D++++IWD
Sbjct: 113 DGQFLASASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWD 172
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
+C+ + V FN +G+ I S+ D +IWD + L+ + V
Sbjct: 173 TTNKQCVNNFSDFVGFANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHY-QVHSGGV 231
Query: 200 SFVKFSPNGKYILAATLDNTLKLWD 224
+ V F P+G Y++ A+ D TLK+ D
Sbjct: 232 NCVSFHPSGNYLITASSDGTLKILD 256
Score = 316 (116.3 bits), Expect = 3.5e-28, P = 3.5e-28
Identities = 75/211 (35%), Positives = 113/211 (53%)
Query: 18 VLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW 77
VL+ GH A++SV FSPNG+ LA+ S D + +W GHK I+ V +
Sbjct: 9 VLERYFKGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVITSVQF 68
Query: 78 SSDSRLLVSGSDDKTLKIWELSS-GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 136
S LL S S D+T+++W GK + K H+ V +F+ + S S D+S++
Sbjct: 69 SPLGNLLASASRDRTIRLWIPDKRGKSSE-FKAHTAPVRSVDFSADGQFLASASEDKSIK 127
Query: 137 IWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 196
+W++ + L +L H+ V F+ DG LIVS S D +IWDT + QC+ D
Sbjct: 128 VWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVG 187
Query: 197 PPVSFVKFSPNGKYILAATLDNTLKLWDSKV 227
+FV F+PNG I +A D+T+K+WD +V
Sbjct: 188 F-ANFVAFNPNGTCIASAGSDHTVKIWDIRV 217
Score = 252 (93.8 bits), Expect = 5.9e-21, P = 5.9e-21
Identities = 54/163 (33%), Positives = 87/163 (53%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISD-VAWSS 79
++L HT V KFSP+G + S S DK IKIW + + S +G ++ VA++
Sbjct: 138 YSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDF-VGFANFVAFNP 196
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
+ + S D T+KIW++ K L+ + HS V C +F+P N +++ S D +++I D
Sbjct: 197 NGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYLITASSDGTLKILD 256
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 182
+ G+ + TL H+ PV V F++ G L S D +W T
Sbjct: 257 LLEGRLIYTLQGHTGPVFTVSFSKGGELFTSGGADAQVLLWRT 299
Score = 239 (89.2 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 56/170 (32%), Positives = 90/170 (52%)
Query: 58 DGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCC 117
D E+ GHK I+ V +S + + L +GS D L +W L GH + +
Sbjct: 7 DPVLERYFKGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVITSV 66
Query: 118 NFNPQSNLIVSGSFDESVRIW--DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 175
F+P NL+ S S D ++R+W D R GK + AH+ PV +V F+ DG + S+S D
Sbjct: 67 QFSPLGNLLASASRDRTIRLWIPDKR-GKSSE-FKAHTAPVRSVDFSADGQFLASASEDK 124
Query: 176 LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225
++W+ + L +L + V KFSP+G+ I++ + D T+K+WD+
Sbjct: 125 SIKVWNMYRQRFLYSLYRHTHW-VRCAKFSPDGRLIVSCSEDKTIKIWDT 173
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 70/205 (34%), Positives = 110/205 (53%)
Query: 20 KFT-LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
KF+ HT V SV FS +G++LA++S DK IK+W Y +F ++ H + +S
Sbjct: 94 KFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFS 153
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
D RL+VS S+DKT+KIW+ ++ +C+ + +FNP I S D++V++W
Sbjct: 154 PDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVW 213
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 198
DVR K L+ HS V+ + F+ + +V++S DG +I D G+ + TL P
Sbjct: 214 DVRVNKLLQHYQVHSGGVNCISFHPSDNYLVTASSDGTLKILDLLEGRLIYTL-QGHTGP 272
Query: 199 VSFVKFSPNGKYILAATLDNTLKLW 223
V V FS G+ + D + LW
Sbjct: 273 VFTVSFSKGGELFASGGADTQVLLW 297
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 65/205 (31%), Positives = 112/205 (54%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW-GAYDGKFEKTISGHKLGISDVAWSS 79
+ GH V+SV+FSP+G LAS+S D+ +++W GKF + H + V +S+
Sbjct: 54 YRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSE-FKAHTAPVRSVDFSA 112
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
D + L + S+DK++K+W + + L +L H+++V C F+P LIVS S D++++IWD
Sbjct: 113 DGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWD 172
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
+C+ + V FN G+ I S+ D ++WD + L+ + V
Sbjct: 173 TTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHY-QVHSGGV 231
Query: 200 SFVKFSPNGKYILAATLDNTLKLWD 224
+ + F P+ Y++ A+ D TLK+ D
Sbjct: 232 NCISFHPSDNYLVTASSDGTLKILD 256
Score = 302 (111.4 bits), Expect = 9.0e-27, P = 9.0e-27
Identities = 68/210 (32%), Positives = 108/210 (51%)
Query: 18 VLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW 77
VL+ GH A++S+ SPNG+ LA++S D + +W GHK ++ V +
Sbjct: 9 VLERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQF 68
Query: 78 SSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 137
S LL S S D+T+++W K H+ V +F+ + + S D+S+++
Sbjct: 69 SPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKV 128
Query: 138 WDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 197
W + + L +L H+ V F+ DG LIVS S D +IWDT + QC+ D
Sbjct: 129 WSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGF 188
Query: 198 PVSFVKFSPNGKYILAATLDNTLKLWDSKV 227
+FV F+P+G I +A D T+K+WD +V
Sbjct: 189 -ANFVDFNPSGTCIASAGSDQTVKVWDVRV 217
Score = 245 (91.3 bits), Expect = 2.8e-20, P = 2.8e-20
Identities = 53/163 (32%), Positives = 86/163 (52%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISD-VAWSS 79
++L HT V KFSP+G + S S DK IKIW + + S +G ++ V ++
Sbjct: 138 YSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSD-SVGFANFVDFNP 196
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
+ S D+T+K+W++ K L+ + HS V C +F+P N +V+ S D +++I D
Sbjct: 197 SGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSDNYLVTASSDGTLKILD 256
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 182
+ G+ + TL H+ PV V F++ G L S D +W T
Sbjct: 257 LLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLWRT 299
Score = 226 (84.6 bits), Expect = 3.6e-18, P = 3.6e-18
Identities = 54/170 (31%), Positives = 85/170 (50%)
Query: 58 DGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCC 117
D E+ GHK I+ + S + + L + S D L +W GH + V
Sbjct: 7 DPVLERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSV 66
Query: 118 NFNPQSNLIVSGSFDESVRIW--DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 175
F+P NL+ S S D +VR+W D R GK AH+ PV +V F+ DG + ++S D
Sbjct: 67 QFSPHGNLLASASRDRTVRLWIPDKR-GK-FSEFKAHTAPVRSVDFSADGQFLATASEDK 124
Query: 176 LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225
++W + L +L + V KFSP+G+ I++ + D T+K+WD+
Sbjct: 125 SIKVWSMYRQRFLYSLYRHTHW-VRCAKFSPDGRLIVSCSEDKTIKIWDT 173
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 64/191 (33%), Positives = 107/191 (56%)
Query: 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 79
K+ L+GH V+ V F P + S+S D IK+W G FE+T+ GH + D+++
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQ 160
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
+LL S S D T+K+W+ +C++T+ GH + V P + IVS S D+++++W+
Sbjct: 161 TGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWE 220
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
V TG C+KT H + V V N+DG+L+ S S D R+W A+ +C L + ++ V
Sbjct: 221 VATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAELREHEHV-V 279
Query: 200 SFVKFSPNGKY 210
+ ++P +
Sbjct: 280 ECISWAPESAH 290
Score = 253 (94.1 bits), Expect = 2.3e-21, P = 2.3e-21
Identities = 52/163 (31%), Positives = 95/163 (58%)
Query: 62 EK-TISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFN 120
EK +SGH+ ++ V + L+VS S+D T+K+W+ +G +TLKGH++ V +F+
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFD 159
Query: 121 PQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 180
L+ S S D ++++WD + +C++T+ H VS+V +G IVS+S D ++W
Sbjct: 160 QTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMW 219
Query: 181 DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 223
+ A+G C+KT V V+ + +G + + + D T+++W
Sbjct: 220 EVATGYCVKTFTGH-REWVRMVRPNQDGTLLASCSNDQTVRVW 261
Score = 228 (85.3 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 40/98 (40%), Positives = 66/98 (67%)
Query: 84 LVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 143
L+SGS DKT+K+W++S+G CL TL GH N+V F+P +VS + D+++RIWD +
Sbjct: 311 LLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDYKNK 370
Query: 144 KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181
+C+KTL AH V+++ F++ +V+ S D ++W+
Sbjct: 371 RCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVWE 408
Score = 216 (81.1 bits), Expect = 3.3e-17, P = 3.3e-17
Identities = 42/118 (35%), Positives = 70/118 (59%)
Query: 107 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGS 166
L GH + V F+P +L+VS S D ++++WD G +TL H+D V + F++ G
Sbjct: 104 LSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGK 163
Query: 167 LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
L+ S S D ++WD +C++T+ D+ VS V PNG +I++A+ D T+K+W+
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHN-VSSVAIMPNGDHIVSASRDKTMKMWE 220
Score = 209 (78.6 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 39/103 (37%), Positives = 62/103 (60%)
Query: 39 GEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWEL 98
G +L S S DK IK+W G T+ GH + V + R +VS +DDKTL+IW+
Sbjct: 308 GPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDY 367
Query: 99 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
+ +C+KTL H ++V +F+ S +V+GS D++V++W+ R
Sbjct: 368 KNKRCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVWECR 410
Score = 187 (70.9 bits), Expect = 5.3e-14, P = 5.3e-14
Identities = 37/103 (35%), Positives = 63/103 (61%)
Query: 126 IVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 185
++SGS D+++++WD+ TG CL TL H + V V F+ G +VS + D RIWD +
Sbjct: 311 LLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDYKNK 370
Query: 186 QCLKTLIDDDN--PPVSFVKFSPNGKYILAATLDNTLKLWDSK 226
+C+KTL ++ + F K SP Y++ ++D T+K+W+ +
Sbjct: 371 RCMKTLSAHEHFVTSLDFHKASP---YVVTGSVDQTVKVWECR 410
Score = 138 (53.6 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 27/76 (35%), Positives = 45/76 (59%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GH V V F P G ++ S + DK ++IW + + KT+S H+ ++ + + S
Sbjct: 333 TLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDYKNKRCMKTLSAHEHFVTSLDFHKAS 392
Query: 82 RLLVSGSDDKTLKIWE 97
+V+GS D+T+K+WE
Sbjct: 393 PYVVTGSVDQTVKVWE 408
Score = 130 (50.8 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 163 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 222
+ G ++S S D ++WD ++G CL TL+ DN V V F P G+++++ D TL++
Sbjct: 306 KPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNW-VRGVLFHPGGRFVVSCADDKTLRI 364
Query: 223 WDSK 226
WD K
Sbjct: 365 WDYK 368
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 75/231 (32%), Positives = 124/231 (53%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY-DGKFEKTISGHKLGISDVAWSSDS 81
L+GH V KF PNG LAS+ D+LI +W Y D T+ GH + ++ +++D
Sbjct: 62 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDG 121
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCC---NFNPQSNLIVSGSFDESVRIW 138
+L S S DKT+ +W+ +G+ +K LKGH+++V C PQ L+ +GS D +V++W
Sbjct: 122 SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQ--LVCTGSDDGTVKLW 179
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 198
D+R ++T ++ V AV FN I+S D ++WD + T+ +
Sbjct: 180 DIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADS- 237
Query: 199 VSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTPL--NLNYFYRNL 247
V+ + S G Y+L+ +DNT+++WD + P C N++ F +NL
Sbjct: 238 VTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNL 288
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 60/212 (28%), Positives = 115/212 (54%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GH+ AV + ++ +G L S+S DK + +W + G+ K + GH ++ +
Sbjct: 104 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRG 163
Query: 82 -RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 140
+L+ +GSDD T+K+W++ ++T + ++ V FN S+ I+SG D +++WD+
Sbjct: 164 PQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDL 222
Query: 141 RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA----SGQCLKTLIDD-D 195
R K T+ H+D V+ + + +GS ++S++ D R+WD +C+K +
Sbjct: 223 RQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVH 282
Query: 196 NPPVSFVK--FSPNGKYILAATLDNTLKLWDS 225
N + ++ +SP+G I A + D + +WD+
Sbjct: 283 NFEKNLLRCSWSPDGSKIAAGSADRFVYVWDT 314
Score = 205 (77.2 bits), Expect = 3.3e-16, P = 3.3e-16
Identities = 44/157 (28%), Positives = 84/157 (53%)
Query: 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV 85
+T V +V F+ + + S D IK+W K T+ GH ++ ++ SS+ L+
Sbjct: 192 NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLL 251
Query: 86 SGSDDKTLKIWELS----SGKCLKTLKGH-SNY---VFCCNFNPQSNLIVSGSFDESVRI 137
S + D T+++W++ +C+K +G+ N+ + C+++P + I +GS D V +
Sbjct: 252 SNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYV 311
Query: 138 WDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 174
WD + + L LP H+ ++ V F+ D +I+S+S D
Sbjct: 312 WDTTSRRILYKLPGHAGSINEVAFHPDEPIIISASSD 348
Score = 151 (58.2 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 31/131 (23%), Positives = 67/131 (51%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGA--YDGK------FEKTISGHKL 70
L +T+ GH +V+ + S G +L S++ D +++W + K F+ + +
Sbjct: 227 LTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEK 286
Query: 71 GISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 130
+ +WS D + +GS D+ + +W+ +S + L L GH+ + F+P +I+S S
Sbjct: 287 NLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIISAS 346
Query: 131 FDESVRIWDVR 141
D+ + + +++
Sbjct: 347 SDKRLYMGEIQ 357
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 75/231 (32%), Positives = 124/231 (53%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY-DGKFEKTISGHKLGISDVAWSSDS 81
L+GH V KF PNG LAS+ D+LI +W Y D T+ GH + ++ +++D
Sbjct: 63 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDG 122
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCC---NFNPQSNLIVSGSFDESVRIW 138
+L S S DKT+ +W+ +G+ +K LKGH+++V C PQ L+ +GS D +V++W
Sbjct: 123 SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQ--LVCTGSDDGTVKLW 180
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 198
D+R ++T ++ V AV FN I+S D ++WD + T+ +
Sbjct: 181 DIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADS- 238
Query: 199 VSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTPL--NLNYFYRNL 247
V+ + S G Y+L+ +DNT+++WD + P C N++ F +NL
Sbjct: 239 VTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNL 289
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 60/212 (28%), Positives = 115/212 (54%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GH+ AV + ++ +G L S+S DK + +W + G+ K + GH ++ +
Sbjct: 105 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRG 164
Query: 82 -RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 140
+L+ +GSDD T+K+W++ ++T + ++ V FN S+ I+SG D +++WD+
Sbjct: 165 PQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDL 223
Query: 141 RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA----SGQCLKTLIDD-D 195
R K T+ H+D V+ + + +GS ++S++ D R+WD +C+K +
Sbjct: 224 RQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVH 283
Query: 196 NPPVSFVK--FSPNGKYILAATLDNTLKLWDS 225
N + ++ +SP+G I A + D + +WD+
Sbjct: 284 NFEKNLLRCSWSPDGSKIAAGSADRFVYVWDT 315
Score = 203 (76.5 bits), Expect = 5.6e-16, P = 5.6e-16
Identities = 44/157 (28%), Positives = 84/157 (53%)
Query: 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV 85
+T V +V F+ + + S D IK+W K T+ GH ++ ++ SS+ L+
Sbjct: 193 NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLL 252
Query: 86 SGSDDKTLKIWELS----SGKCLKTLKGH-SNY---VFCCNFNPQSNLIVSGSFDESVRI 137
S + D T+++W++ +C+K +G+ N+ + C+++P + I +GS D V +
Sbjct: 253 SNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYV 312
Query: 138 WDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 174
WD + + L LP H+ ++ V F+ D +I+S+S D
Sbjct: 313 WDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSD 349
Score = 149 (57.5 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 31/131 (23%), Positives = 67/131 (51%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGA--YDGK------FEKTISGHKL 70
L +T+ GH +V+ + S G +L S++ D +++W + K F+ + +
Sbjct: 228 LTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEK 287
Query: 71 GISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 130
+ +WS D + +GS D+ + +W+ +S + L L GH+ + F+P +I+S S
Sbjct: 288 NLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSAS 347
Query: 131 FDESVRIWDVR 141
D+ + + +++
Sbjct: 348 SDKRLYMGEIQ 358
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 75/231 (32%), Positives = 124/231 (53%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY-DGKFEKTISGHKLGISDVAWSSDS 81
L+GH V KF PNG LAS+ D+LI +W Y D T+ GH + ++ +++D
Sbjct: 63 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDG 122
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCC---NFNPQSNLIVSGSFDESVRIW 138
+L S S DKT+ +W+ +G+ +K LKGH+++V C PQ L+ +GS D +V++W
Sbjct: 123 SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQ--LVCTGSDDGTVKLW 180
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 198
D+R ++T ++ V AV FN I+S D ++WD + T+ +
Sbjct: 181 DIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADS- 238
Query: 199 VSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTPL--NLNYFYRNL 247
V+ + S G Y+L+ +DNT+++WD + P C N++ F +NL
Sbjct: 239 VTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNL 289
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 60/212 (28%), Positives = 115/212 (54%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GH+ AV + ++ +G L S+S DK + +W + G+ K + GH ++ +
Sbjct: 105 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRG 164
Query: 82 -RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 140
+L+ +GSDD T+K+W++ ++T + ++ V FN S+ I+SG D +++WD+
Sbjct: 165 PQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDL 223
Query: 141 RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA----SGQCLKTLIDD-D 195
R K T+ H+D V+ + + +GS ++S++ D R+WD +C+K +
Sbjct: 224 RQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVH 283
Query: 196 NPPVSFVK--FSPNGKYILAATLDNTLKLWDS 225
N + ++ +SP+G I A + D + +WD+
Sbjct: 284 NFEKNLLRCSWSPDGSKIAAGSADRFVYVWDT 315
Score = 203 (76.5 bits), Expect = 5.6e-16, P = 5.6e-16
Identities = 44/157 (28%), Positives = 84/157 (53%)
Query: 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV 85
+T V +V F+ + + S D IK+W K T+ GH ++ ++ SS+ L+
Sbjct: 193 NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLL 252
Query: 86 SGSDDKTLKIWELS----SGKCLKTLKGH-SNY---VFCCNFNPQSNLIVSGSFDESVRI 137
S + D T+++W++ +C+K +G+ N+ + C+++P + I +GS D V +
Sbjct: 253 SNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYV 312
Query: 138 WDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 174
WD + + L LP H+ ++ V F+ D +I+S+S D
Sbjct: 313 WDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSD 349
Score = 149 (57.5 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 31/131 (23%), Positives = 67/131 (51%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGA--YDGK------FEKTISGHKL 70
L +T+ GH +V+ + S G +L S++ D +++W + K F+ + +
Sbjct: 228 LTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEK 287
Query: 71 GISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 130
+ +WS D + +GS D+ + +W+ +S + L L GH+ + F+P +I+S S
Sbjct: 288 NLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSAS 347
Query: 131 FDESVRIWDVR 141
D+ + + +++
Sbjct: 348 SDKRLYMGEIQ 358
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 75/231 (32%), Positives = 124/231 (53%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY-DGKFEKTISGHKLGISDVAWSSDS 81
L+GH V KF PNG LAS+ D+LI +W Y D T+ GH + ++ +++D
Sbjct: 62 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDG 121
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCC---NFNPQSNLIVSGSFDESVRIW 138
+L S S DKT+ +W+ +G+ +K LKGH+++V C PQ L+ +GS D +V++W
Sbjct: 122 SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQ--LVCTGSDDGTVKLW 179
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 198
D+R ++T ++ V AV FN I+S D ++WD + T+ +
Sbjct: 180 DIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADS- 237
Query: 199 VSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTPL--NLNYFYRNL 247
V+ + S G Y+L+ +DNT+++WD + P C N++ F +NL
Sbjct: 238 VTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNL 288
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 60/212 (28%), Positives = 115/212 (54%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GH+ AV + ++ +G L S+S DK + +W + G+ K + GH ++ +
Sbjct: 104 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRG 163
Query: 82 -RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 140
+L+ +GSDD T+K+W++ ++T + ++ V FN S+ I+SG D +++WD+
Sbjct: 164 PQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDL 222
Query: 141 RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA----SGQCLKTLIDD-D 195
R K T+ H+D V+ + + +GS ++S++ D R+WD +C+K +
Sbjct: 223 RQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVH 282
Query: 196 NPPVSFVK--FSPNGKYILAATLDNTLKLWDS 225
N + ++ +SP+G I A + D + +WD+
Sbjct: 283 NFEKNLLRCSWSPDGSKIAAGSADRFVYVWDT 314
Score = 209 (78.6 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 59/216 (27%), Positives = 105/216 (48%)
Query: 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV 85
+T V +V F+ + + S D IK+W K T+ GH ++ ++ SS+ L+
Sbjct: 192 NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLL 251
Query: 86 SGSDDKTLKIWELS----SGKCLKTLKGH-SNY---VFCCNFNPQSNLIVSGSFDESVRI 137
S + D T+++W++ +C+K +G+ N+ + C+++P + I +GS D V +
Sbjct: 252 SNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYV 311
Query: 138 WDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 197
WD + + L LP H+ ++ V F+ D +I + G RI GQ L+ NP
Sbjct: 312 WDTTSRRILYKLPGHAGSINEVAFHPDEPIIET----GFHRI-----GQGGHELLTSSNP 362
Query: 198 PVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAII 233
P S + + A L T+ +W S V+P +I
Sbjct: 363 PASASQSAGITGVSHCAQLQ-TVFMWVSMSVSPLLI 397
Score = 137 (53.3 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 29/119 (24%), Positives = 59/119 (49%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGA--YDGK------FEKTISGHKL 70
L +T+ GH +V+ + S G +L S++ D +++W + K F+ + +
Sbjct: 227 LTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEK 286
Query: 71 GISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 129
+ +WS D + +GS D+ + +W+ +S + L L GH+ + F+P +I +G
Sbjct: 287 NLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIETG 345
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 75/231 (32%), Positives = 124/231 (53%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY-DGKFEKTISGHKLGISDVAWSSDS 81
L+GH V KF PNG LAS+ D+LI +W Y D T+ GH + ++ +++D
Sbjct: 63 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDG 122
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCC---NFNPQSNLIVSGSFDESVRIW 138
+L S S DKT+ +W+ +G+ +K LKGH+++V C PQ L+ +GS D +V++W
Sbjct: 123 SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQ--LVCTGSDDGTVKLW 180
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 198
D+R ++T ++ V AV FN I+S D ++WD + T+ +
Sbjct: 181 DIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADS- 238
Query: 199 VSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTPL--NLNYFYRNL 247
V+ + S G Y+L+ +DNT+++WD + P C N++ F +NL
Sbjct: 239 VTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNL 289
Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
Identities = 59/212 (27%), Positives = 115/212 (54%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GH+ AV + ++ +G L S+S DK + +W + G+ K + GH ++ +
Sbjct: 105 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRG 164
Query: 82 -RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 140
+L+ +GSDD T+K+W++ ++T + ++ V FN S+ I+SG D +++WD+
Sbjct: 165 PQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDL 223
Query: 141 RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA----SGQCLKTLIDD-D 195
R K T+ H+D V+ + + +GS ++S++ D R+WD +C++ +
Sbjct: 224 RQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVH 283
Query: 196 NPPVSFVK--FSPNGKYILAATLDNTLKLWDS 225
N + ++ +SP+G I A + D + +WD+
Sbjct: 284 NFEKNLLRCSWSPDGSKIAAGSADRFVYVWDT 315
Score = 200 (75.5 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 43/157 (27%), Positives = 84/157 (53%)
Query: 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV 85
+T V +V F+ + + S D IK+W K T+ GH ++ ++ SS+ L+
Sbjct: 193 NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLL 252
Query: 86 SGSDDKTLKIWELS----SGKCLKTLKGH-SNY---VFCCNFNPQSNLIVSGSFDESVRI 137
S + D T+++W++ +C++ +G+ N+ + C+++P + I +GS D V +
Sbjct: 253 SNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYV 312
Query: 138 WDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 174
WD + + L LP H+ ++ V F+ D +I+S+S D
Sbjct: 313 WDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSD 349
Score = 149 (57.5 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 31/131 (23%), Positives = 67/131 (51%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGA--YDGK------FEKTISGHKL 70
L +T+ GH +V+ + S G +L S++ D +++W + K F+ + +
Sbjct: 228 LTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFEK 287
Query: 71 GISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 130
+ +WS D + +GS D+ + +W+ +S + L L GH+ + F+P +I+S S
Sbjct: 288 NLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSAS 347
Query: 131 FDESVRIWDVR 141
D+ + + +++
Sbjct: 348 SDKRLYMGEIQ 358
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 75/231 (32%), Positives = 124/231 (53%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY-DGKFEKTISGHKLGISDVAWSSDS 81
L+GH V KF PNG LAS+ D+LI +W Y D T+ GH + ++ +++D
Sbjct: 63 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWSVYGDCDNYATLKGHSGAVMELHYNTDG 122
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCC---NFNPQSNLIVSGSFDESVRIW 138
+L S S DKT+ +W+ +G+ +K LKGH+++V C PQ L+ +GS D +V++W
Sbjct: 123 SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQ--LVCTGSDDGTVKLW 180
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 198
D+R ++T ++ V AV FN I+S D ++WD + T+ +
Sbjct: 181 DIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADS- 238
Query: 199 VSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTPL--NLNYFYRNL 247
V+ + S G Y+L+ +DNT+++WD + P C N++ F +NL
Sbjct: 239 VTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNL 289
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 61/212 (28%), Positives = 114/212 (53%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GH+ AV + ++ +G L S+S DK + +W + G+ K + GH ++ +
Sbjct: 105 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRG 164
Query: 82 -RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 140
+L+ +GSDD T+K+W++ ++T + ++ V FN S+ I+SG D +++WD+
Sbjct: 165 PQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDL 223
Query: 141 RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA----SGQCLKTLIDD-D 195
R K T+ H+D V+ + + +GS ++S++ D R+WD +C+K +
Sbjct: 224 RQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVH 283
Query: 196 NPPVSFVK--FSPNGKYILAATLDNTLKLWDS 225
N + ++ +SP+G I A + D+ L W S
Sbjct: 284 NFEKNLLRCSWSPDGSKIAAGSADSFLYPWHS 315
Score = 167 (63.8 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 46/175 (26%), Positives = 84/175 (48%)
Query: 23 LAGHTKAVSSVKFSPNGEWLA-SSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
L GHT V+S + G L + S D +K+W +T + + V ++ S
Sbjct: 148 LKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTS 206
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
++SG D +K+W+L K T++GH++ V + + + + ++S + D +VR+WDVR
Sbjct: 207 DQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVR 266
Query: 142 T----GKCLKTLPA--HSDPVSAVH--FNRDGSLIVSSSYDGLCRIWDTASGQCL 188
+C+K H+ + + ++ DGS I + S D W + S + L
Sbjct: 267 PFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADSFLYPWHSLSVRSL 321
Score = 153 (58.9 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 41/159 (25%), Positives = 80/159 (50%)
Query: 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV 85
+T V +V F+ + + S D IK+W K T+ GH ++ ++ SS+ L+
Sbjct: 193 NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLL 252
Query: 86 SGSDDKTLKIWELS----SGKCLKTLKGH-SNY---VFCCNFNPQSNLIVSGSFDESVRI 137
S + D T+++W++ +C+K +G+ N+ + C+++P + I +GS D +
Sbjct: 253 SNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADSFLYP 312
Query: 138 WDVRTGKCLKTLPAH--SDPVSAVHFNRDGSLIVSSSYD 174
W + + L +P H S +V ++G I+S+S D
Sbjct: 313 WHSLSVRSLGQIPRHRLSRQEDSVK-PQEGIXILSASSD 350
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 75/231 (32%), Positives = 124/231 (53%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY-DGKFEKTISGHKLGISDVAWSSDS 81
L+GH V KF PNG LAS+ D+LI +W Y D T+ GH + ++ +++D
Sbjct: 63 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDG 122
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCC---NFNPQSNLIVSGSFDESVRIW 138
+L S S DKT+ +W+ +G+ +K LKGH+++V C PQ L+ +GS D +V++W
Sbjct: 123 SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQ--LVCTGSDDGTVKLW 180
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 198
D+R ++T ++ V AV FN I+S D ++WD + T+ +
Sbjct: 181 DIRKKAAVQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADS- 238
Query: 199 VSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTPL--NLNYFYRNL 247
V+ + S G Y+L+ +DNT+++WD + P C N++ F +NL
Sbjct: 239 VTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNL 289
Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
Identities = 60/212 (28%), Positives = 115/212 (54%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GH+ AV + ++ +G L S+S DK + +W + G+ K + GH ++ +
Sbjct: 105 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRG 164
Query: 82 -RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 140
+L+ +GSDD T+K+W++ ++T + ++ V FN S+ I+SG D +++WD+
Sbjct: 165 PQLVCTGSDDGTVKLWDIRKKAAVQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDL 223
Query: 141 RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA----SGQCLKTLIDD-D 195
R K T+ H+D V+ + + +GS ++S++ D R+WD +C+K +
Sbjct: 224 RQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVH 283
Query: 196 NPPVSFVK--FSPNGKYILAATLDNTLKLWDS 225
N + ++ +SP+G I A + D + +WD+
Sbjct: 284 NFEKNLLRCSWSPDGSKIAAGSADRFVYVWDT 315
Score = 203 (76.5 bits), Expect = 5.6e-16, P = 5.6e-16
Identities = 44/157 (28%), Positives = 84/157 (53%)
Query: 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV 85
+T V +V F+ + + S D IK+W K T+ GH ++ ++ SS+ L+
Sbjct: 193 NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLL 252
Query: 86 SGSDDKTLKIWELS----SGKCLKTLKGH-SNY---VFCCNFNPQSNLIVSGSFDESVRI 137
S + D T+++W++ +C+K +G+ N+ + C+++P + I +GS D V +
Sbjct: 253 SNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYV 312
Query: 138 WDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 174
WD + + L LP H+ ++ V F+ D +I+S+S D
Sbjct: 313 WDTTSRRVLYKLPGHAGSINEVAFHPDEPIILSASSD 349
Score = 149 (57.5 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 31/131 (23%), Positives = 67/131 (51%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGA--YDGK------FEKTISGHKL 70
L +T+ GH +V+ + S G +L S++ D +++W + K F+ + +
Sbjct: 228 LTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEK 287
Query: 71 GISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 130
+ +WS D + +GS D+ + +W+ +S + L L GH+ + F+P +I+S S
Sbjct: 288 NLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRVLYKLPGHAGSINEVAFHPDEPIILSAS 347
Query: 131 FDESVRIWDVR 141
D+ + + +++
Sbjct: 348 SDKRLYMGEIQ 358
>TAIR|locus:2008159 [details] [associations]
symbol:RACK1B_AT "AT1G48630" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0048364 "root development"
evidence=IGI] [GO:0048367 "shoot system development" evidence=IGI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006417 "regulation of translation" evidence=IGI]
[GO:0009845 "seed germination" evidence=IGI] [GO:0042254 "ribosome
biogenesis" evidence=IGI] [GO:0071215 "cellular response to
abscisic acid stimulus" evidence=IEP] [GO:0001510 "RNA methylation"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0009664 "plant-type cell wall
organization" evidence=RCA] [GO:0042545 "cell wall modification"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006417 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0042254 GO:GO:0048364 GO:GO:0009845 GO:GO:0004871
GO:GO:0071215 GO:GO:0048367 GO:GO:0022626 EMBL:AC073555 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AC074308 EMBL:AY059723 EMBL:AY091352 EMBL:AY087855 EMBL:Z26552
IPI:IPI00531991 RefSeq:NP_175296.1 UniGene:At.17343
ProteinModelPortal:Q9C4Z6 SMR:Q9C4Z6 IntAct:Q9C4Z6 STRING:Q9C4Z6
PaxDb:Q9C4Z6 PRIDE:Q9C4Z6 EnsemblPlants:AT1G48630.1 GeneID:841284
KEGG:ath:AT1G48630 GeneFarm:2979 TAIR:At1g48630 InParanoid:Q9C4Z6
OMA:NCKLRNT PhylomeDB:Q9C4Z6 Genevestigator:Q9C4Z6 Uniprot:Q9C4Z6
Length = 326
Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 70/207 (33%), Positives = 119/207 (57%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
+ GH+ V V S +G++ S S D +++W G+ + GH + VA+S+D+R
Sbjct: 59 MTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNR 118
Query: 83 LLVSGSDDKTLKIWELSSGKCLKTLK---GHSNYVFCCNFNPQSNL--IVSGSFDESVRI 137
+VS S D+T+K+W + G+C T+ GH +V C F+P + + IVS S+D++V++
Sbjct: 119 QIVSASRDRTIKLWN-TLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKV 177
Query: 138 WDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 197
W+++ K TL HS ++ V + DGSL S DG+ +WD A G+ L +L +
Sbjct: 178 WNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSL--EAGS 235
Query: 198 PVSFVKFSPNGKYILAATLDNTLKLWD 224
+ + FSPN +Y L A +N++++WD
Sbjct: 236 IIHSLCFSPN-RYWLCAATENSIRIWD 261
Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 66/220 (30%), Positives = 116/220 (52%)
Query: 18 VLKFTLAGHTKAVSSVKFSP--NGEWLASSSADKLIKIWG------AYDGKFEKTISGHK 69
VLK T+ HT V+++ +P N + + +SS DK I +W +Y G ++ ++GH
Sbjct: 6 VLKGTMCAHTDMVTAIA-TPVDNSDVIVTSSRDKSIILWKLTKEDKSY-GVAQRRMTGHS 63
Query: 70 LGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 129
+ DV SSD + +SGS D L++W+L++G+ + GH+ V F+ + IVS
Sbjct: 64 HFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSA 123
Query: 130 SFDESVRIWDVRTGKCLKTLP---AHSDPVSAVHFNRDGSL--IVSSSYDGLCRIWDTAS 184
S D ++++W+ G+C T+ H + VS V F+ + + IVS+S+D ++W+ +
Sbjct: 124 SRDRTIKLWNT-LGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQN 182
Query: 185 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
+ TL ++ V SP+G + D + LWD
Sbjct: 183 CKLRNTLAGHSGY-LNTVAVSPDGSLCASGGKDGVILLWD 221
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 62/175 (35%), Positives = 100/175 (57%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS---GHKLGISDVAWSSDS 81
GHTK V SV FS + + S+S D+ IK+W G+ + TIS GHK +S V +S ++
Sbjct: 103 GHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTL-GECKYTISEADGHKEWVSCVRFSPNT 161
Query: 82 RL--LVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
+ +VS S DKT+K+W L + K TL GHS Y+ +P +L SG D + +WD
Sbjct: 162 LVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWD 221
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD 194
+ GK L +L A S + ++ F+ + + +++ + + RIWD S K++++D
Sbjct: 222 LAEGKKLYSLEAGSI-IHSLCFSPNRYWLCAATENSI-RIWDLES----KSVVED 270
Score = 191 (72.3 bits), Expect = 3.2e-18, Sum P(2) = 3.2e-18
Identities = 45/135 (33%), Positives = 75/135 (55%)
Query: 20 KFTLA---GHTKAVSSVKFSPNG--EWLASSSADKLIKIWGAYDGKFEKTISGHKLGISD 74
K+T++ GH + VS V+FSPN + S+S DK +K+W + K T++GH ++
Sbjct: 139 KYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNT 198
Query: 75 VAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 134
VA S D L SG D + +W+L+ GK L +L+ S C F+P + + + + S
Sbjct: 199 VAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGSIIHSLC-FSPNRYWLCAAT-ENS 256
Query: 135 VRIWDVRTGKCLKTL 149
+RIWD+ + ++ L
Sbjct: 257 IRIWDLESKSVVEDL 271
Score = 159 (61.0 bits), Expect = 6.2e-10, P = 6.2e-10
Identities = 42/136 (30%), Positives = 72/136 (52%)
Query: 98 LSSGKCLK-TLKGHSNYVFCCNFNP--QSNLIVSGSFDESVRIW-----DVRTGKCLKTL 149
++ G LK T+ H++ V P S++IV+ S D+S+ +W D G + +
Sbjct: 1 MAEGLVLKGTMCAHTDMVTAIA-TPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRM 59
Query: 150 PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK 209
HS V V + DG +S S+DG R+WD A+G+ + + +S V FS + +
Sbjct: 60 TGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLS-VAFSTDNR 118
Query: 210 YILAATLDNTLKLWDS 225
I++A+ D T+KLW++
Sbjct: 119 QIVSASRDRTIKLWNT 134
Score = 110 (43.8 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 26/90 (28%), Positives = 50/90 (55%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L+ TLAGH+ +++V SP+G AS D +I +W +GK ++ + I + +S
Sbjct: 185 LRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGSI-IHSLCFS 243
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLK 108
+ R + + + +++IW+L S ++ LK
Sbjct: 244 PN-RYWLCAATENSIRIWDLESKSVVEDLK 272
Score = 49 (22.3 bits), Expect = 3.2e-18, Sum P(2) = 3.2e-18
Identities = 7/24 (29%), Positives = 17/24 (70%)
Query: 157 SAVHFNRDGSLIVSSSYDGLCRIW 180
++++++ DG+ + S DG+ R+W
Sbjct: 298 TSLNWSADGNTLFSGYTDGVIRVW 321
Score = 48 (22.0 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 8/29 (27%), Positives = 16/29 (55%)
Query: 114 VFCC--NFNPQSNLIVSGSFDESVRIWDV 140
++C N++ N + SG D +R+W +
Sbjct: 295 IYCTSLNWSADGNTLFSGYTDGVIRVWGI 323
>WB|WBGene00004767 [details] [associations]
symbol:sel-10 species:6239 "Caenorhabditis elegans"
[GO:0008593 "regulation of Notch signaling pathway" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660
GO:GO:0045746 GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 330 (121.2 bits), Expect = 3.3e-29, P = 3.3e-29
Identities = 67/206 (32%), Positives = 113/206 (54%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 80
+TL GHT V + + S G ++ S S D+ +K+W DG T+ GH + +A +
Sbjct: 290 YTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGS 349
Query: 81 SRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 140
+LV+GS D TL++W++ SG+ L TL GH V C F+ +VSG +D +V+IW+
Sbjct: 350 --ILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQFD--GTTVVSGGYDFTVKIWNA 405
Query: 141 RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA--SGQCLKTLIDDDNPP 198
TG+C++TL H++ V ++ F + S++ S S D R+WD GQ L+
Sbjct: 406 HTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSL 465
Query: 199 VSFVKFSPNGKYILAATLDNTLKLWD 224
S ++ G +++ D+ +++WD
Sbjct: 466 TSGMQL--RGNILVSCNADSHVRVWD 489
Score = 309 (113.8 bits), Expect = 6.7e-27, P = 6.7e-27
Identities = 67/202 (33%), Positives = 109/202 (53%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
L GH V + + + L + S D +K+W G+ T+ GH G+ S R
Sbjct: 251 LRGHEDHVITC-MQIHDDVLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGR 309
Query: 83 LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 142
+VSGS D+T+K+W G L TL+GH++ V C +++V+GS D ++R+WDV +
Sbjct: 310 YIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAM--AGSILVTGSRDTTLRVWDVES 367
Query: 143 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 202
G+ L TL H V V F DG+ +VS YD +IW+ +G+C++TL +N S +
Sbjct: 368 GRHLATLHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLL 425
Query: 203 KFSPNGKYILAATLDNTLKLWD 224
F + + +LD ++++WD
Sbjct: 426 -FESERSIVCSGSLDTSIRVWD 446
Score = 298 (110.0 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 67/209 (32%), Positives = 106/209 (50%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L TL GHT V + + G L + S D +++W G+ T+ GH + V +
Sbjct: 330 LLHTLQGHTSTVRCMAMA--GSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQF- 386
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
D +VSG D T+KIW +G+C++TL GH+N V+ F + +++ SGS D S+R+W
Sbjct: 387 -DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVW 445
Query: 139 DVRT--GK-CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD 195
D G+ C+ L H+ S + G+++VS + D R+WD G C+ L
Sbjct: 446 DFTRPEGQECVALLQGHTSLTSGMQLR--GNILVSCNADSHVRVWDIHEGTCVHMLSGHR 503
Query: 196 NPPVSFVKFSPNGKYILAATLDNTLKLWD 224
+ S F N + ++ D T+KLWD
Sbjct: 504 SAITSLQWFGRN--MVATSSDDGTVKLWD 530
Score = 254 (94.5 bits), Expect = 6.5e-21, P = 6.5e-21
Identities = 53/179 (29%), Positives = 100/179 (55%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GH AV V+F +G + S D +KIW A+ G+ +T++GH + + + S+
Sbjct: 373 TLHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESER 430
Query: 82 RLLVSGSDDKTLKIWELS--SGK-CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
++ SGS D ++++W+ + G+ C+ L+GH++ + N++VS + D VR+W
Sbjct: 431 SIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLT--SGMQLRGNILVSCNADSHVRVW 488
Query: 139 DVRTGKCLKTLPAHSDPVSAVH-FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 196
D+ G C+ L H ++++ F R+ ++ +SS DG ++WD G ++ L+ D+
Sbjct: 489 DIHEGTCVHMLSGHRSAITSLQWFGRN--MVATSSDDGTVKLWDIERGALIRDLVTLDS 545
Score = 247 (92.0 bits), Expect = 3.7e-20, P = 3.7e-20
Identities = 60/179 (33%), Positives = 93/179 (51%)
Query: 47 ADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKT 106
ADK+ K W A + GH+ + D +LV+GSDD TLK+W + G+ + T
Sbjct: 233 ADKIEKNWNANPIMGSAVLRGHEDHVITCMQIHDD-VLVTGSDDNTLKVWCIDKGEVMYT 291
Query: 107 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGS 166
L GH+ V+ + IVSGS D +V++W G L TL H+ V + GS
Sbjct: 292 LVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMA--GS 349
Query: 167 LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225
++V+ S D R+WD SG+ L TL + V V+F +G +++ D T+K+W++
Sbjct: 350 ILVTGSRDTTLRVWDVESGRHLATL-HGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNA 405
>UNIPROTKB|Q93794 [details] [associations]
symbol:sel-10 "F-box/WD repeat-containing protein sel-10"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0046660 "female
sex differentiation" evidence=IMP] [GO:0045746 "negative regulation
of Notch signaling pathway" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660 GO:GO:0045746
GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 330 (121.2 bits), Expect = 3.3e-29, P = 3.3e-29
Identities = 67/206 (32%), Positives = 113/206 (54%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 80
+TL GHT V + + S G ++ S S D+ +K+W DG T+ GH + +A +
Sbjct: 290 YTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGS 349
Query: 81 SRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 140
+LV+GS D TL++W++ SG+ L TL GH V C F+ +VSG +D +V+IW+
Sbjct: 350 --ILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQFD--GTTVVSGGYDFTVKIWNA 405
Query: 141 RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA--SGQCLKTLIDDDNPP 198
TG+C++TL H++ V ++ F + S++ S S D R+WD GQ L+
Sbjct: 406 HTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSL 465
Query: 199 VSFVKFSPNGKYILAATLDNTLKLWD 224
S ++ G +++ D+ +++WD
Sbjct: 466 TSGMQL--RGNILVSCNADSHVRVWD 489
Score = 309 (113.8 bits), Expect = 6.7e-27, P = 6.7e-27
Identities = 67/202 (33%), Positives = 109/202 (53%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
L GH V + + + L + S D +K+W G+ T+ GH G+ S R
Sbjct: 251 LRGHEDHVITC-MQIHDDVLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGR 309
Query: 83 LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 142
+VSGS D+T+K+W G L TL+GH++ V C +++V+GS D ++R+WDV +
Sbjct: 310 YIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAM--AGSILVTGSRDTTLRVWDVES 367
Query: 143 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 202
G+ L TL H V V F DG+ +VS YD +IW+ +G+C++TL +N S +
Sbjct: 368 GRHLATLHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLL 425
Query: 203 KFSPNGKYILAATLDNTLKLWD 224
F + + +LD ++++WD
Sbjct: 426 -FESERSIVCSGSLDTSIRVWD 446
Score = 298 (110.0 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 67/209 (32%), Positives = 106/209 (50%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L TL GHT V + + G L + S D +++W G+ T+ GH + V +
Sbjct: 330 LLHTLQGHTSTVRCMAMA--GSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQF- 386
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
D +VSG D T+KIW +G+C++TL GH+N V+ F + +++ SGS D S+R+W
Sbjct: 387 -DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVW 445
Query: 139 DVRT--GK-CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD 195
D G+ C+ L H+ S + G+++VS + D R+WD G C+ L
Sbjct: 446 DFTRPEGQECVALLQGHTSLTSGMQLR--GNILVSCNADSHVRVWDIHEGTCVHMLSGHR 503
Query: 196 NPPVSFVKFSPNGKYILAATLDNTLKLWD 224
+ S F N + ++ D T+KLWD
Sbjct: 504 SAITSLQWFGRN--MVATSSDDGTVKLWD 530
Score = 254 (94.5 bits), Expect = 6.5e-21, P = 6.5e-21
Identities = 53/179 (29%), Positives = 100/179 (55%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GH AV V+F +G + S D +KIW A+ G+ +T++GH + + + S+
Sbjct: 373 TLHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESER 430
Query: 82 RLLVSGSDDKTLKIWELS--SGK-CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
++ SGS D ++++W+ + G+ C+ L+GH++ + N++VS + D VR+W
Sbjct: 431 SIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLT--SGMQLRGNILVSCNADSHVRVW 488
Query: 139 DVRTGKCLKTLPAHSDPVSAVH-FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 196
D+ G C+ L H ++++ F R+ ++ +SS DG ++WD G ++ L+ D+
Sbjct: 489 DIHEGTCVHMLSGHRSAITSLQWFGRN--MVATSSDDGTVKLWDIERGALIRDLVTLDS 545
Score = 247 (92.0 bits), Expect = 3.7e-20, P = 3.7e-20
Identities = 60/179 (33%), Positives = 93/179 (51%)
Query: 47 ADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKT 106
ADK+ K W A + GH+ + D +LV+GSDD TLK+W + G+ + T
Sbjct: 233 ADKIEKNWNANPIMGSAVLRGHEDHVITCMQIHDD-VLVTGSDDNTLKVWCIDKGEVMYT 291
Query: 107 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGS 166
L GH+ V+ + IVSGS D +V++W G L TL H+ V + GS
Sbjct: 292 LVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMA--GS 349
Query: 167 LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225
++V+ S D R+WD SG+ L TL + V V+F +G +++ D T+K+W++
Sbjct: 350 ILVTGSRDTTLRVWDVESGRHLATL-HGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNA 405
>TAIR|locus:2092707 [details] [associations]
symbol:RACK1C_AT "AT3G18130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0048364 "root
development" evidence=IGI] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0009845 "seed germination" evidence=IGI]
[GO:0071215 "cellular response to abscisic acid stimulus"
evidence=IEP] [GO:0005829 "cytosol" evidence=RCA] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048364 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0048367 EMBL:AB020749 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AY050338 EMBL:AY101529 IPI:IPI00545680 RefSeq:NP_188441.1
UniGene:At.22741 ProteinModelPortal:Q9LV28 SMR:Q9LV28 IntAct:Q9LV28
STRING:Q9LV28 PaxDb:Q9LV28 PRIDE:Q9LV28 EnsemblPlants:AT3G18130.1
GeneID:821338 KEGG:ath:AT3G18130 GeneFarm:2980 TAIR:At3g18130
InParanoid:Q9LV28 OMA:NCKLRNS PhylomeDB:Q9LV28
Genevestigator:Q9LV28 Uniprot:Q9LV28
Length = 326
Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
Identities = 70/207 (33%), Positives = 119/207 (57%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
L GH+ V V S +G++ S S D +++W G+ + GH + VA+S+D+R
Sbjct: 59 LTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNR 118
Query: 83 LLVSGSDDKTLKIWELSSGKCLKTLK---GHSNYVFCCNFNPQSNL--IVSGSFDESVRI 137
+VS S D+T+K+W + G+C T+ GH +V C F+P + + IVS S+D++V++
Sbjct: 119 QIVSASRDRTIKLWN-TLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKV 177
Query: 138 WDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 197
W+++ K +L HS ++ V + DGSL S DG+ +WD A G+ L +L +
Sbjct: 178 WNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSL--EAGS 235
Query: 198 PVSFVKFSPNGKYILAATLDNTLKLWD 224
+ + FSPN +Y L A +N++++WD
Sbjct: 236 IIHSLCFSPN-RYWLCAATENSIRIWD 261
Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 63/219 (28%), Positives = 115/219 (52%)
Query: 18 VLKFTLAGHTKAVSSVKFSP--NGEWLASSSADKLIKIWG-AYDGKF----EKTISGHKL 70
VLK + HT V+++ +P N + + ++S DK I +W D K ++ ++GH
Sbjct: 6 VLKGIMRAHTDIVTAIA-TPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSH 64
Query: 71 GISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 130
+ DV SSD + +SGS D L++W+L++G+ + GH+ V F+ + IVS S
Sbjct: 65 FVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSAS 124
Query: 131 FDESVRIWDVRTGKCLKTLP---AHSDPVSAVHFNRDGSL--IVSSSYDGLCRIWDTASG 185
D ++++W+ G+C T+ H + VS V F+ + + IVS+S+D ++W+ +
Sbjct: 125 RDRTIKLWNT-LGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNC 183
Query: 186 QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
+ +L+ ++ V SP+G + D + LWD
Sbjct: 184 KLRNSLVGHSGY-LNTVAVSPDGSLCASGGKDGVILLWD 221
Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 61/175 (34%), Positives = 100/175 (57%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS---GHKLGISDVAWSSDS 81
GHTK V SV FS + + S+S D+ IK+W G+ + TIS GHK +S V +S ++
Sbjct: 103 GHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTL-GECKYTISEGDGHKEWVSCVRFSPNT 161
Query: 82 RL--LVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
+ +VS S DKT+K+W L + K +L GHS Y+ +P +L SG D + +WD
Sbjct: 162 LVPTIVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWD 221
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD 194
+ GK L +L A S + ++ F+ + + +++ + + RIWD S K++++D
Sbjct: 222 LAEGKKLYSLEAGSI-IHSLCFSPNRYWLCAATENSI-RIWDLES----KSVVED 270
Score = 184 (69.8 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 44/135 (32%), Positives = 74/135 (54%)
Query: 20 KFTLA---GHTKAVSSVKFSPNG--EWLASSSADKLIKIWGAYDGKFEKTISGHKLGISD 74
K+T++ GH + VS V+FSPN + S+S DK +K+W + K ++ GH ++
Sbjct: 139 KYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNT 198
Query: 75 VAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 134
VA S D L SG D + +W+L+ GK L +L+ S C F+P + + + + S
Sbjct: 199 VAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGSIIHSLC-FSPNRYWLCAAT-ENS 256
Query: 135 VRIWDVRTGKCLKTL 149
+RIWD+ + ++ L
Sbjct: 257 IRIWDLESKSVVEDL 271
Score = 161 (61.7 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 42/136 (30%), Positives = 72/136 (52%)
Query: 98 LSSGKCLK-TLKGHSNYVFCCNFNP--QSNLIVSGSFDESVRIW-----DVRTGKCLKTL 149
++ G LK ++ H++ V P S++IV+ S D+S+ +W D G + L
Sbjct: 1 MAEGLVLKGIMRAHTDIVTAIA-TPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRL 59
Query: 150 PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK 209
HS V V + DG +S S+DG R+WD A+G+ + + +S V FS + +
Sbjct: 60 TGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLS-VAFSTDNR 118
Query: 210 YILAATLDNTLKLWDS 225
I++A+ D T+KLW++
Sbjct: 119 QIVSASRDRTIKLWNT 134
Score = 102 (41.0 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 24/90 (26%), Positives = 49/90 (54%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L+ +L GH+ +++V SP+G AS D +I +W +GK ++ + I + +S
Sbjct: 185 LRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGSI-IHSLCFS 243
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLK 108
+ R + + + +++IW+L S ++ LK
Sbjct: 244 PN-RYWLCAATENSIRIWDLESKSVVEDLK 272
Score = 52 (23.4 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 8/24 (33%), Positives = 17/24 (70%)
Query: 157 SAVHFNRDGSLIVSSSYDGLCRIW 180
++++++ DGS + S DG+ R+W
Sbjct: 298 TSLNWSADGSTLFSGYTDGVVRVW 321
Score = 44 (20.5 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 8/29 (27%), Positives = 16/29 (55%)
Query: 114 VFCC--NFNPQSNLIVSGSFDESVRIWDV 140
++C N++ + + SG D VR+W +
Sbjct: 295 IYCTSLNWSADGSTLFSGYTDGVVRVWGI 323
>ZFIN|ZDB-GENE-030131-5143 [details] [associations]
symbol:prpf4 "PRP4 pre-mRNA processing factor 4
homolog (yeast)" species:7955 "Danio rerio" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 ZFIN:ZDB-GENE-030131-5143 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 InterPro:IPR027106 PANTHER:PTHR19846
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:BX510338 EMBL:CR925761
EMBL:CU652834 EMBL:BC056720 EMBL:BC154322 IPI:IPI00488410
RefSeq:NP_956049.1 RefSeq:XP_002662201.1 UniGene:Dr.76045
SMR:Q6PH45 STRING:Q6PH45 Ensembl:ENSDART00000097395
Ensembl:ENSDART00000111950 GeneID:100334455 GeneID:326944
KEGG:dre:100334455 KEGG:dre:326944 InParanoid:Q6PH45
NextBio:20809805 Uniprot:Q6PH45
Length = 507
Score = 326 (119.8 bits), Expect = 4.1e-29, P = 4.1e-29
Identities = 66/208 (31%), Positives = 114/208 (54%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI---SGHKLGISDVAWSS 79
+ GH+ V+ V + P+G +L ++ D ++W D + ++ I GH G+ D+ +
Sbjct: 304 IEGHSMRVARVTWHPSGRFLGTTCYDHSWRLW---DLEVQEEILHQEGHSKGVHDLHFHP 360
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
D L +G D ++W+L +G+C+ L+GH ++ NF+P + +GS D + ++WD
Sbjct: 361 DGSLAGTGGLDSFARVWDLRTGRCVMFLEGHIKEIYSINFSPNGFHVATGSGDNACKVWD 420
Query: 140 VRTGKCLKTLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 198
+R +C+ T+PAH + VS+V F DG +++ +YD +IW LKTL +
Sbjct: 421 LRQRRCIYTIPAHQNLVSSVKFQPNDGHYLLTGAYDNTAKIWTHPGWSPLKTLAGHEGK- 479
Query: 199 VSFVKFSPNGKYILAATLDNTLKLWDSK 226
V V SP+G+ I + D T KLW S+
Sbjct: 480 VMGVDLSPDGQLIATCSYDRTFKLWMSE 507
Score = 316 (116.3 bits), Expect = 5.6e-28, P = 5.6e-28
Identities = 66/211 (31%), Positives = 107/211 (50%)
Query: 22 TLAGHTKAVSSVKFSPNGEW--------LASSSADKLIKIWGAYDGKFEKTISGHKLGIS 73
TL GH V ++ F P +AS +AD +K+W + I GH + ++
Sbjct: 253 TLRGHNTNVGAISFHPQATLTLEESDVNMASCAADGSVKLWSLDSDEPIADIEGHSMRVA 312
Query: 74 DVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 133
V W R L + D + ++W+L + + +GHS V +F+P +L +G D
Sbjct: 313 RVTWHPSGRFLGTTCYDHSWRLWDLEVQEEILHQEGHSKGVHDLHFHPDGSLAGTGGLDS 372
Query: 134 SVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 193
R+WD+RTG+C+ L H + +++F+ +G + + S D C++WD +C+ T+
Sbjct: 373 FARVWDLRTGRCVMFLEGHIKEIYSINFSPNGFHVATGSGDNACKVWDLRQRRCIYTIPA 432
Query: 194 DDNPPVSFVKFSPN-GKYILAATLDNTLKLW 223
N VS VKF PN G Y+L DNT K+W
Sbjct: 433 HQNL-VSSVKFQPNDGHYLLTGAYDNTAKIW 462
Score = 278 (102.9 bits), Expect = 1.0e-23, P = 1.0e-23
Identities = 59/208 (28%), Positives = 104/208 (50%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLL 84
G + +S +FSPN + L ++S L K+W D +T+ GH + +++ + L
Sbjct: 214 GDDRPISYCQFSPNSKLLVTASWSGLCKLWKVPDCTLIRTLRGHNTNVGAISFHPQATLT 273
Query: 85 VSGSD--------DKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 136
+ SD D ++K+W L S + + ++GHS V ++P + + +D S R
Sbjct: 274 LEESDVNMASCAADGSVKLWSLDSDEPIADIEGHSMRVARVTWHPSGRFLGTTCYDHSWR 333
Query: 137 IWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 196
+WD+ + + HS V +HF+ DGSL + D R+WD +G+C+ L +
Sbjct: 334 LWDLEVQEEILHQEGHSKGVHDLHFHPDGSLAGTGGLDSFARVWDLRTGRCVMFL-EGHI 392
Query: 197 PPVSFVKFSPNGKYILAATLDNTLKLWD 224
+ + FSPNG ++ + DN K+WD
Sbjct: 393 KEIYSINFSPNGFHVATGSGDNACKVWD 420
Score = 133 (51.9 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 21 FTLAGHTKAVSSVKFSPN-GEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 79
+T+ H VSSVKF PN G +L + + D KIW KT++GH+ + V S
Sbjct: 428 YTIPAHQNLVSSVKFQPNDGHYLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGVDLSP 487
Query: 80 DSRLLVSGSDDKTLKIW 96
D +L+ + S D+T K+W
Sbjct: 488 DGQLIATCSYDRTFKLW 504
Score = 133 (51.9 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 32/127 (25%), Positives = 63/127 (49%)
Query: 109 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSL- 167
G + C F+P S L+V+ S+ ++W V ++TL H+ V A+ F+ +L
Sbjct: 214 GDDRPISYCQFSPNSKLLVTASWSGLCKLWKVPDCTLIRTLRGHNTNVGAISFHPQATLT 273
Query: 168 -------IVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTL 220
+ S + DG ++W S + + I+ + V+ V + P+G+++ D++
Sbjct: 274 LEESDVNMASCAADGSVKLWSLDSDEPIAD-IEGHSMRVARVTWHPSGRFLGTTCYDHSW 332
Query: 221 KLWDSKV 227
+LWD +V
Sbjct: 333 RLWDLEV 339
>TAIR|locus:2194060 [details] [associations]
symbol:ATARCA "AT1G18080" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP;RCA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006417
"regulation of translation" evidence=IGI] [GO:0009845 "seed
germination" evidence=IGI] [GO:0042254 "ribosome biogenesis"
evidence=IGI] [GO:0071215 "cellular response to abscisic acid
stimulus" evidence=IEP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006096
"glycolysis" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] [GO:0009651 "response to salt
stress" evidence=RCA] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] [GO:0010476 "gibberellin mediated signaling
pathway" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009507 GO:GO:0046686 GO:GO:0006417 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042254 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0022626 EMBL:AC034107
EMBL:AC069551 EMBL:U77381 EMBL:AY035007 EMBL:AY063016 EMBL:AK318781
EMBL:AY088480 IPI:IPI00524816 IPI:IPI00930983 RefSeq:NP_173248.1
UniGene:At.22612 UniGene:At.67882 PDB:3DM0 PDBsum:3DM0
ProteinModelPortal:O24456 SMR:O24456 IntAct:O24456 STRING:O24456
PaxDb:O24456 PRIDE:O24456 EnsemblPlants:AT1G18080.1 GeneID:838388
KEGG:ath:AT1G18080 GeneFarm:2809 TAIR:At1g18080
HOGENOM:HOG000091643 InParanoid:O24456 KO:K14753 OMA:IRVWQVM
PhylomeDB:O24456 ProtClustDB:CLSN2682135 EvolutionaryTrace:O24456
Genevestigator:O24456 GermOnline:AT1G18080 GO:GO:0010476
Uniprot:O24456
Length = 327
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 73/208 (35%), Positives = 117/208 (56%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
L GH+ V V S +G++ S S D +++W G + GH + VA+S D+R
Sbjct: 59 LTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNR 118
Query: 83 LLVSGSDDKTLKIWELSSGKCLKTL----KGHSNYVFCCNFNPQS--NLIVSGSFDESVR 136
+VS S D+T+K+W + G+C T+ +GH ++V C F+P + IVS S+D++V+
Sbjct: 119 QIVSASRDRTIKLWN-TLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVK 177
Query: 137 IWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 196
+W++ K TL H+ VS V + DGSL S DG+ +WD A G+ L +L + N
Sbjct: 178 VWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSL--EAN 235
Query: 197 PPVSFVKFSPNGKYILAATLDNTLKLWD 224
+ + FSPN +Y L A ++ +K+WD
Sbjct: 236 SVIHALCFSPN-RYWLCAATEHGIKIWD 262
Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 71/221 (32%), Positives = 114/221 (51%)
Query: 18 VLKFTLAGHTKAVSSVKFSP--NGEWLASSSADKLIKIWG------AYDGKFEKTISGHK 69
VLK T+ HT V+++ +P N + + S+S DK I +W AY G ++ ++GH
Sbjct: 6 VLKGTMRAHTDMVTAIA-TPIDNADIIVSASRDKSIILWKLTKDDKAY-GVAQRRLTGHS 63
Query: 70 LGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 129
+ DV SSD + +SGS D L++W+L++G + GH+ V F+ + IVS
Sbjct: 64 HFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSA 123
Query: 130 SFDESVRIWDVRTGKCLKTLP----AHSDPVSAVHF--NRDGSLIVSSSYDGLCRIWDTA 183
S D ++++W+ G+C T+ H D VS V F N IVS+S+D ++W+ +
Sbjct: 124 SRDRTIKLWNT-LGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLS 182
Query: 184 SGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
+ + TL VS V SP+G + D + LWD
Sbjct: 183 NCKLRSTLAGHTGY-VSTVAVSPDGSLCASGGKDGVVLLWD 222
Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 64/176 (36%), Positives = 101/176 (57%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS----GHKLGISDVAWSSD 80
GHTK V SV FS + + S+S D+ IK+W G+ + TIS GH+ +S V +S +
Sbjct: 103 GHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTL-GECKYTISEGGEGHRDWVSCVRFSPN 161
Query: 81 SR--LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
+ +VS S DKT+K+W LS+ K TL GH+ YV +P +L SG D V +W
Sbjct: 162 TLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLW 221
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD 194
D+ GK L +L A+S + A+ F+ + + +++ G+ +IWD S K++++D
Sbjct: 222 DLAEGKKLYSLEANS-VIHALCFSPNRYWLCAATEHGI-KIWDLES----KSIVED 271
Score = 162 (62.1 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 44/136 (32%), Positives = 71/136 (52%)
Query: 98 LSSGKCLK-TLKGHSNYVFCCNFNPQSN--LIVSGSFDESVRIW-----DVRTGKCLKTL 149
++ G LK T++ H++ V P N +IVS S D+S+ +W D G + L
Sbjct: 1 MAEGLVLKGTMRAHTDMVTAIA-TPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRL 59
Query: 150 PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK 209
HS V V + DG +S S+DG R+WD A+G + + +S V FS + +
Sbjct: 60 TGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLS-VAFSLDNR 118
Query: 210 YILAATLDNTLKLWDS 225
I++A+ D T+KLW++
Sbjct: 119 QIVSASRDRTIKLWNT 134
Score = 120 (47.3 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 30/90 (33%), Positives = 46/90 (51%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L+ TLAGHT VS+V SP+G AS D ++ +W +GK K S +
Sbjct: 186 LRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGK--KLYSLEANSVIHALCF 243
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLK 108
S +R + + + +KIW+L S ++ LK
Sbjct: 244 SPNRYWLCAATEHGIKIWDLESKSIVEDLK 273
Score = 52 (23.4 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 8/24 (33%), Positives = 17/24 (70%)
Query: 157 SAVHFNRDGSLIVSSSYDGLCRIW 180
++++++ DGS + S DG+ R+W
Sbjct: 299 TSLNWSADGSTLFSGYTDGVIRVW 322
Score = 43 (20.2 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 7/29 (24%), Positives = 16/29 (55%)
Query: 114 VFCC--NFNPQSNLIVSGSFDESVRIWDV 140
++C N++ + + SG D +R+W +
Sbjct: 296 IYCTSLNWSADGSTLFSGYTDGVIRVWGI 324
>FB|FBgn0010356 [details] [associations]
symbol:Taf5 "TBP-associated factor 5" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0005669 "transcription factor TFIID complex"
evidence=ISS;IDA;IPI] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0000124 "SAGA complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0000124 GO:GO:0005669 GO:GO:0051123
GeneTree:ENSGT00700000104377 KO:K03130 EMBL:U06460 EMBL:AY051960
PIR:S33263 RefSeq:NP_476957.1 UniGene:Dm.19905
ProteinModelPortal:P49846 SMR:P49846 DIP:DIP-48906N STRING:P49846
PaxDb:P49846 PRIDE:P49846 EnsemblMetazoa:FBtr0088240 GeneID:47900
KEGG:dme:Dmel_CG7704 CTD:6877 FlyBase:FBgn0010356 InParanoid:P49846
OMA:ERQNNQI OrthoDB:EOG4F7M11 PhylomeDB:P49846 GenomeRNAi:47900
NextBio:839215 Bgee:P49846 GermOnline:CG7704 Uniprot:P49846
Length = 704
Score = 331 (121.6 bits), Expect = 4.7e-29, P = 4.7e-29
Identities = 73/208 (35%), Positives = 107/208 (51%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
+L GHT V F+P L S S D I++W T GH + DV ++
Sbjct: 445 SLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVVTYRGHVYPVWDVRFAPHG 504
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
VS S DKT ++W S + L+ GH + V C F+P SN + +GS D +VR+WD
Sbjct: 505 YYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNM 564
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 201
TG+ ++ + H VS++ F+ G + S S D IWD ++G + TL+ + V+
Sbjct: 565 TGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDLSNGSLVTTLLRHTST-VTT 623
Query: 202 VKFSPNGKYILAATLDNTLKLWDSKVVT 229
+ FS +G + AA LDN L LWD VT
Sbjct: 624 ITFSRDGTVLAAAGLDNNLTLWDFHKVT 651
Score = 255 (94.8 bits), Expect = 7.5e-21, P = 7.5e-21
Identities = 63/206 (30%), Positives = 101/206 (49%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 80
+T+ + V+ + S + LA D ++IW K +T+ +D
Sbjct: 371 YTVLNSHQGVTCAEISDDSTMLACGFGDSSVRIWSLTPAKL-RTLK-----------DAD 418
Query: 81 S-RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
S R L S D +++ + SG+ ++L GH+ V+ C F P+ NL++S S D ++R+W
Sbjct: 419 SLRELDKESADINVRMLDDRSGEVTRSLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWS 478
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
+ T C+ T H PV V F G VS SYD R+W T S Q L+ + + V
Sbjct: 479 LLTWSCVVTYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVFVGHLSD-V 537
Query: 200 SFVKFSPNGKYILAATLDNTLKLWDS 225
V+F PN Y+ + D T++LWD+
Sbjct: 538 DCVQFHPNSNYVATGSSDRTVRLWDN 563
Score = 254 (94.5 bits), Expect = 9.6e-21, P = 9.6e-21
Identities = 51/183 (27%), Positives = 97/183 (53%)
Query: 42 LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSG 101
L SAD +++ G+ +++ GH + A++ + LL+S S+D T+++W L +
Sbjct: 423 LDKESADINVRMLDDRSGEVTRSLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTW 482
Query: 102 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHF 161
C+ T +GH V+ F P VS S+D++ R+W + + L+ H V V F
Sbjct: 483 SCVVTYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQF 542
Query: 162 NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLK 221
+ + + + + S D R+WD +GQ ++ L+ VS + FS G+Y+ + ++D+ +
Sbjct: 543 HPNSNYVATGSSDRTVRLWDNMTGQSVR-LMTGHKGSVSSLAFSACGRYLASGSVDHNII 601
Query: 222 LWD 224
+WD
Sbjct: 602 IWD 604
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
Identities = 74/231 (32%), Positives = 125/231 (54%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY-DGKFEKTISGHKLGISDVAWSSDS 81
L+GH V KF PNG LASS D+LI +W Y D + T+ GH + ++ +++D
Sbjct: 52 LSGHEGEVYCCKFHPNGATLASSGYDRLILMWNVYGDCENYATLKGHSGAVMELHYNTDG 111
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCC---NFNPQSNLIVSGSFDESVRIW 138
LL S S DKT+ +W+ +G+ +K LKGH+++V C PQ L +GS D +V++W
Sbjct: 112 SLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNSCFPARRGPQ--LACTGSDDGTVKLW 169
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 198
D+R + T ++ V +V FN I+S D ++WD + + ++
Sbjct: 170 DIRKKASVHTFQ-NTYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLIYSM-QGHGDS 227
Query: 199 VSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTPL--NLNYFYRNL 247
V+ + S +G Y+L+ ++DN++++WD + P C N++ F +NL
Sbjct: 228 VTGLSLSADGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNFEKNL 278
Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 63/224 (28%), Positives = 116/224 (51%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GH+ AV + ++ +G L S+S DK + +W + G+ K + GH ++ +
Sbjct: 94 TLKGHSGAVMELHYNTDGSLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNSCFPARRG 153
Query: 82 -RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 140
+L +GSDD T+K+W++ + T + ++ V FN S+ I+SG D +++WD+
Sbjct: 154 PQLACTGSDDGTVKLWDIRKKASVHTFQ-NTYQVLSVTFNDTSDQIISGGIDNDIKVWDL 212
Query: 141 RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD----TASGQCLKTLIDD-D 195
R K + ++ H D V+ + + DGS ++S+S D R+WD +C+K +
Sbjct: 213 RQNKLIYSMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVH 272
Query: 196 NPPVSFVK--FSPNGKYILAATLDNTLKLWDSKVVTPAIICSTP 237
N + ++ +S +G I A + D + +WD+ T I+ P
Sbjct: 273 NFEKNLLRCSWSADGSKIAAGSADRFVYIWDT--TTRRIVYKLP 314
Score = 190 (71.9 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 43/157 (27%), Positives = 82/157 (52%)
Query: 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV 85
+T V SV F+ + + S D IK+W K ++ GH ++ ++ S+D L+
Sbjct: 182 NTYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLIYSMQGHGDSVTGLSLSADGSYLL 241
Query: 86 SGSDDKTLKIWELS----SGKCLKTLKGH-SNY---VFCCNFNPQSNLIVSGSFDESVRI 137
S S D ++++W++ +C+K +G+ N+ + C+++ + I +GS D V I
Sbjct: 242 SNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNFEKNLLRCSWSADGSKIAAGSADRFVYI 301
Query: 138 WDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 174
WD T + + LP H+ V+ V F+ + +++S S D
Sbjct: 302 WDTTTRRIVYKLPGHAGSVNEVAFHPEEPIVLSGSSD 338
Score = 151 (58.2 bits), Expect = 9.1e-09, P = 9.1e-09
Identities = 32/131 (24%), Positives = 71/131 (54%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGA--YDGK------FEKTISGHKL 70
L +++ GH +V+ + S +G +L S+S D +++W + K F+ + +
Sbjct: 217 LIYSMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNFEK 276
Query: 71 GISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 130
+ +WS+D + +GS D+ + IW+ ++ + + L GH+ V F+P+ +++SGS
Sbjct: 277 NLLRCSWSADGSKIAAGSADRFVYIWDTTTRRIVYKLPGHAGSVNEVAFHPEEPIVLSGS 336
Query: 131 FDESVRIWDVR 141
D+ + I +++
Sbjct: 337 SDKRLYIGEIQ 347
>CGD|CAL0000165 [details] [associations]
symbol:orf19.536 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0046695 "SLIK (SAGA-like) complex" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0032947
"protein complex scaffold" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 CGD:CAL0000165
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03130 HOGENOM:HOG000212424
RefSeq:XP_717399.1 RefSeq:XP_717491.1 ProteinModelPortal:Q5A6L8
STRING:Q5A6L8 GeneID:3640929 GeneID:3640987 KEGG:cal:CaO19.536
KEGG:cal:CaO19.8169 Uniprot:Q5A6L8
Length = 798
Score = 331 (121.6 bits), Expect = 6.5e-29, P = 6.5e-29
Identities = 65/204 (31%), Positives = 109/204 (53%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
L GH+ V V FSP+ ++L S S DK +++W + GH + DV +S
Sbjct: 513 LIGHSGPVYGVSFSPDNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVKFSPLGH 572
Query: 83 LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 142
V+ S D+T ++W L+ GH N V C F+P SN + +GS D++ R+WDV T
Sbjct: 573 YFVTASHDQTARLWATDHIYPLRIFAGHINDVDCVEFHPNSNYVFTGSSDKTCRMWDVHT 632
Query: 143 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 202
G C++ H++ V+ + + DG + S DG+ +WD SG+ LK++ + +
Sbjct: 633 GNCVRVFLGHTNSVNCLAVSPDGRWLASGGEDGIICVWDIGSGRRLKSMRGHARASLYSL 692
Query: 203 KFSPNGKYILAATLDNTLKLWDSK 226
FS +G +++ DN++++WD K
Sbjct: 693 AFSRDGTVLVSGCADNSVRVWDVK 716
Score = 274 (101.5 bits), Expect = 8.7e-23, P = 8.7e-23
Identities = 54/167 (32%), Positives = 95/167 (56%)
Query: 17 YVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKLGISDV 75
Y + GHT+ V VKFSP G + ++S D+ ++W A D + I +GH + V
Sbjct: 549 YTALVSYKGHTQPVWDVKFSPLGHYFVTASHDQTARLW-ATDHIYPLRIFAGHINDVDCV 607
Query: 76 AWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 135
+ +S + +GS DKT ++W++ +G C++ GH+N V C +P + SG D +
Sbjct: 608 EFHPNSNYVFTGSSDKTCRMWDVHTGNCVRVFLGHTNSVNCLAVSPDGRWLASGGEDGII 667
Query: 136 RIWDVRTGKCLKTLPAHSDP-VSAVHFNRDGSLIVSSSYDGLCRIWD 181
+WD+ +G+ LK++ H+ + ++ F+RDG+++VS D R+WD
Sbjct: 668 CVWDIGSGRRLKSMRGHARASLYSLAFSRDGTVLVSGCADNSVRVWD 714
Score = 255 (94.8 bits), Expect = 9.5e-21, P = 9.5e-21
Identities = 58/222 (26%), Positives = 112/222 (50%)
Query: 18 VLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS----------- 66
V +T ++ ++F+ + +A+ D IK+W + DGK K++
Sbjct: 452 VCMYTFHNTNNNMTCIEFNDDSTLVAAGFQDSYIKLW-SLDGKPLKSVLKRDRHKPQENT 510
Query: 67 ----GHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQ 122
GH + V++S D++ L+S S+DKT+++W L + L + KGH+ V+ F+P
Sbjct: 511 RKLIGHSGPVYGVSFSPDNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVKFSPL 570
Query: 123 SNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 182
+ V+ S D++ R+W L+ H + V V F+ + + + + S D CR+WD
Sbjct: 571 GHYFVTASHDQTARLWATDHIYPLRIFAGHINDVDCVEFHPNSNYVFTGSSDKTCRMWDV 630
Query: 183 ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
+G C++ + N V+ + SP+G+++ + D + +WD
Sbjct: 631 HTGNCVRVFLGHTNS-VNCLAVSPDGRWLASGGEDGIICVWD 671
Score = 162 (62.1 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 46/152 (30%), Positives = 70/152 (46%)
Query: 103 CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTL-------P----- 150
C+ T +N + C FN S L+ +G D +++W + GK LK++ P
Sbjct: 453 CMYTFHNTNNNMTCIEFNDDSTLVAAGFQDSYIKLWSL-DGKPLKSVLKRDRHKPQENTR 511
Query: 151 ---AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPN 207
HS PV V F+ D ++S S D R+W + L + PV VKFSP
Sbjct: 512 KLIGHSGPVYGVSFSPDNKYLLSCSEDKTVRLWSLDTYTALVSY-KGHTQPVWDVKFSPL 570
Query: 208 GKYILAATLDNTLKLWDSKVVTPAIICSTPLN 239
G Y + A+ D T +LW + + P I + +N
Sbjct: 571 GHYFVTASHDQTARLWATDHIYPLRIFAGHIN 602
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 74/231 (32%), Positives = 123/231 (53%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY-DGKFEKTISGHKLGISDVAWSSDS 81
L+GH V KF P G LAS+ D+LI +W Y D T+ GH + ++ +++D
Sbjct: 89 LSGHEGEVYCCKFHPWGNTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDG 148
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCC---NFNPQSNLIVSGSFDESVRIW 138
+L S S DKT+ +W+ +G+ +K LKGH+++V C PQ L+ +GS D +V++W
Sbjct: 149 SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQ--LVCTGSDDGTVKLW 206
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 198
D+R ++T ++ V AV FN I+S D ++WD + T+ +
Sbjct: 207 DIRKKAAVQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADS- 264
Query: 199 VSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTPL--NLNYFYRNL 247
V+ + S G Y+L+ +DNT+++WD + P C N++ F +NL
Sbjct: 265 VTGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKIFQGNVHNFEKNL 315
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 60/212 (28%), Positives = 114/212 (53%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GH+ AV + ++ +G L S+S DK + +W + G+ K + GH ++ +
Sbjct: 131 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRG 190
Query: 82 -RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 140
+L+ +GSDD T+K+W++ ++T + ++ V FN S+ I+SG D +++WD+
Sbjct: 191 PQLVCTGSDDGTVKLWDIRKKAAVQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDL 249
Query: 141 RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA----SGQCLKTLIDD-D 195
R K T+ H+D V+ + + +GS ++S++ D RIWD +C+K +
Sbjct: 250 RQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKIFQGNVH 309
Query: 196 NPPVSFVK--FSPNGKYILAATLDNTLKLWDS 225
N + ++ +SP+G I + D + +WD+
Sbjct: 310 NFEKNLLRCSWSPDGSKIAGGSADRFVYVWDT 341
Score = 200 (75.5 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 58/207 (28%), Positives = 98/207 (47%)
Query: 23 LAGHTKAVSSVKFSPNGEWLA-SSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
L GHT V+S + G L + S D +K+W +T + + V ++ S
Sbjct: 174 LKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQ-NTYQVLAVTFNDTS 232
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
++SG D +K+W+L K T++GH++ V + + + + ++S + D +VRIWDVR
Sbjct: 233 DQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWDVR 292
Query: 142 T----GKCLKTLPA--HSDPVSAVH--FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 193
+C+K H+ + + ++ DGS I S D +WDT S + L L
Sbjct: 293 PFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAGGSADRFVYVWDTTSRRILYKLPG 352
Query: 194 DDNPPVSFVKFSPNGKYILAATLDNTL 220
V+ + F P IL+A+ D L
Sbjct: 353 HAGS-VNELAFHPEEPIILSASSDKRL 378
Score = 152 (58.6 bits), Expect = 8.3e-09, P = 8.3e-09
Identities = 33/131 (25%), Positives = 67/131 (51%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGA--YDGK------FEKTISGHKL 70
L +T+ GH +V+ + S G +L S++ D ++IW + K F+ + +
Sbjct: 254 LTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKIFQGNVHNFEK 313
Query: 71 GISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 130
+ +WS D + GS D+ + +W+ +S + L L GH+ V F+P+ +I+S S
Sbjct: 314 NLLRCSWSPDGSKIAGGSADRFVYVWDTTSRRILYKLPGHAGSVNELAFHPEEPIILSAS 373
Query: 131 FDESVRIWDVR 141
D+ + + +++
Sbjct: 374 SDKRLYMGEIQ 384
>UNIPROTKB|P49027 [details] [associations]
symbol:RACK1A "Guanine nucleotide-binding protein subunit
beta-like protein A" species:39947 "Oryza sativa Japonica Group"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0050832 "defense response to fungus" evidence=IMP] [GO:0060267
"positive regulation of respiratory burst" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005737 GO:GO:0009507 GO:GO:0046686
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0050832 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048364 GO:GO:0004871 GO:GO:0048367
GO:GO:0022626 EMBL:AP008207 EMBL:CM000138 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM ProtClustDB:CLSN2682135 EMBL:D38231
EMBL:AP003452 EMBL:AK060428 EMBL:AK098893 EMBL:AK121587 PIR:T03764
RefSeq:NP_001043910.1 UniGene:Os.4684 ProteinModelPortal:P49027
SMR:P49027 STRING:P49027 PRIDE:P49027
EnsemblPlants:LOC_Os01g49290.1 GeneID:4324115
KEGG:dosa:Os01t0686800-02 KEGG:osa:4324115 Gramene:P49027
GO:GO:0060267 Uniprot:P49027
Length = 334
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 78/230 (33%), Positives = 124/230 (53%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
L GH+ V V S +G++ S S D +++W G + GH + VA+S D+R
Sbjct: 71 LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLSTGVTTRRFVGHDKDVLSVAFSVDNR 130
Query: 83 LLVSGSDDKTLKIWELSSGKCLKTL-------KGHSNYVFCCNFNPQS--NLIVSGSFDE 133
+VS S D+T+K+W + G+C T+ +GH+ +V C F+P + IVSGS+D
Sbjct: 131 QIVSASRDRTIKLWN-TLGECKYTIGGDLGGGEGHNGWVSCVRFSPNTFQPTIVSGSWDR 189
Query: 134 SVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 193
+V++W++ K L H V+AV + DGSL S DG+ +WD A G+ L +L
Sbjct: 190 TVKVWNLTNCKLRCNLEGHGGYVNAVAVSPDGSLCASGGKDGVTLLWDLAEGKRLYSL-- 247
Query: 194 DDNPPVSFVKFSPNGKYILAATLDNTLKLWD--SKVVTPAIICSTPLNLN 241
D + + FSPN ++ AAT D+ +K+WD SK + + P++ N
Sbjct: 248 DAGSIIHSLCFSPNRYWLCAATQDS-IKIWDLESKHIVQDLKPEIPVSKN 296
Score = 219 (82.2 bits), Expect = 5.1e-18, P = 5.1e-18
Identities = 67/218 (30%), Positives = 111/218 (50%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG-------HKLGISDVAW 77
GH K V SV FS + + S+S D+ IK+W G+ + TI G H +S V +
Sbjct: 115 GHDKDVLSVAFSVDNRQIVSASRDRTIKLWNTL-GECKYTIGGDLGGGEGHNGWVSCVRF 173
Query: 78 SSDS--RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 135
S ++ +VSGS D+T+K+W L++ K L+GH YV +P +L SG D
Sbjct: 174 SPNTFQPTIVSGSWDRTVKVWNLTNCKLRCNLEGHGGYVNAVAVSPDGSLCASGGKDGVT 233
Query: 136 RIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD 195
+WD+ GK L +L A S + ++ F+ + + +++ D + +IWD S K ++ D
Sbjct: 234 LLWDLAEGKRLYSLDAGSI-IHSLCFSPNRYWLCAATQDSI-KIWDLES----KHIVQDL 287
Query: 196 NP--PVS--------FVKFSPNGKYILAATLDNTLKLW 223
P PVS + +S +G + A D T++++
Sbjct: 288 KPEIPVSKNQMLYCTSLNWSADGSTLYAGYTDGTIRIY 325
Score = 219 (82.2 bits), Expect = 5.1e-18, P = 5.1e-18
Identities = 67/232 (28%), Positives = 109/232 (46%)
Query: 18 VLKFTLAGHTKAVSSVKFSP--NGEWLASSSADKLIKIW---------GAYDGKFE---- 62
VL + GH V+++ +P N ++ SSS DK + +W G G E
Sbjct: 9 VLAGVMHGHNDVVTAIA-TPIDNSPFIVSSSRDKSLLVWDLTNPVQNVGEGAGASEYGVP 67
Query: 63 -KTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNP 121
+ ++GH + DV SSD + +SGS D L++W+LS+G + GH V F+
Sbjct: 68 FRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLSTGVTTRRFVGHDKDVLSVAFSV 127
Query: 122 QSNLIVSGSFDESVRIWDVRTGKCLKTL-------PAHSDPVSAVHF--NRDGSLIVSSS 172
+ IVS S D ++++W+ G+C T+ H+ VS V F N IVS S
Sbjct: 128 DNRQIVSASRDRTIKLWNT-LGECKYTIGGDLGGGEGHNGWVSCVRFSPNTFQPTIVSGS 186
Query: 173 YDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
+D ++W+ + + L+ ++ V+ V SP+G + D LWD
Sbjct: 187 WDRTVKVWNLTNCK-LRCNLEGHGGYVNAVAVSPDGSLCASGGKDGVTLLWD 237
Score = 143 (55.4 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 41/135 (30%), Positives = 66/135 (48%)
Query: 107 LKGHSNYVFCCNFNPQSN--LIVSGSFDESVRIWDVRT--------------GKCLKTLP 150
+ GH++ V P N IVS S D+S+ +WD+ G + L
Sbjct: 14 MHGHNDVVTAIA-TPIDNSPFIVSSSRDKSLLVWDLTNPVQNVGEGAGASEYGVPFRRLT 72
Query: 151 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKY 210
HS V V + DG +S S+DG R+WD ++G + + D +S V FS + +
Sbjct: 73 GHSHFVQDVVLSSDGQFALSGSWDGELRLWDLSTGVTTRRFVGHDKDVLS-VAFSVDNRQ 131
Query: 211 ILAATLDNTLKLWDS 225
I++A+ D T+KLW++
Sbjct: 132 IVSASRDRTIKLWNT 146
Score = 115 (45.5 bits), Expect = 0.00020, P = 0.00020
Identities = 33/129 (25%), Positives = 63/129 (48%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L+ L GH V++V SP+G AS D + +W +GK ++ + I + +S
Sbjct: 201 LRCNLEGHGGYVNAVAVSPDGSLCASGGKDGVTLLWDLAEGKRLYSLDAGSI-IHSLCFS 259
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGH----SNYVFCC---NFNPQSNLIVSGSF 131
+ L + + D ++KIW+L S ++ LK N + C N++ + + +G
Sbjct: 260 PNRYWLCAATQD-SIKIWDLESKHIVQDLKPEIPVSKNQMLYCTSLNWSADGSTLYAGYT 318
Query: 132 DESVRIWDV 140
D ++RI+ +
Sbjct: 319 DGTIRIYKI 327
>POMBASE|SPAC6B12.15 [details] [associations]
symbol:cpc2 "RACK1 ortholog Cpc2" species:4896
"Schizosaccharomyces pombe" [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0031137 "regulation of conjugation with cellular
fusion" evidence=IGI] [GO:0031139 "positive regulation of
conjugation with cellular fusion" evidence=IMP] [GO:0032956
"regulation of actin cytoskeleton organization" evidence=IGI]
[GO:0032995 "regulation of fungal-type cell wall biogenesis"
evidence=IGI] [GO:0034613 "cellular protein localization"
evidence=IMP] [GO:0035556 "intracellular signal transduction"
evidence=IMP] [GO:0043022 "ribosome binding" evidence=IDA]
[GO:2000766 "negative regulation of cytoplasmic translation"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC6B12.15 GO:GO:0005737 EMBL:CU329670
GO:GO:0034613 GO:GO:0016020 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0032995
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0043022 GO:GO:0032956 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM EMBL:L37885 EMBL:AF320333 EMBL:D89247
PIR:T43158 PIR:T43299 RefSeq:NP_593770.1 ProteinModelPortal:Q10281
SMR:Q10281 IntAct:Q10281 MINT:MINT-1203489 STRING:Q10281
PRIDE:Q10281 EnsemblFungi:SPAC6B12.15.1 GeneID:2543298
KEGG:spo:SPAC6B12.15 OrthoDB:EOG437VPP NextBio:20804316
GO:GO:2000766 GO:GO:0031139 Uniprot:Q10281
Length = 314
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 81/234 (34%), Positives = 121/234 (51%)
Query: 18 VLKFTLAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAY-D----GKFEKTISGHKLG 71
VL+ TL GH+ V+S+ +P N + L S S DK I +W D G ++ ++GH
Sbjct: 6 VLRATLEGHSGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHF 65
Query: 72 ISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 131
+SD A S DS +S S DKT+++W+L G+C GH++ V + +P + +VSGS
Sbjct: 66 VSDCALSFDSHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQVVSGSR 125
Query: 132 DESVRIWDVRTGKCLKTLP--AHSDPVSAVHF--NRDGSLIVSSSYDGLCRIWDTASGQC 187
D++++IW++ G C T+ HSD VS V F N D VS+ +D ++WD +
Sbjct: 126 DKTIKIWNI-IGNCKYTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLETFS- 183
Query: 188 LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTPLNLN 241
L+T VS V SP+G + D TL LWD T N+N
Sbjct: 184 LRTSHYGHTGYVSAVTISPDGSLCASGGRDGTLMLWDLNESTHLYSLEAKANIN 237
Score = 220 (82.5 bits), Expect = 3.6e-18, P = 3.6e-18
Identities = 59/210 (28%), Positives = 103/210 (49%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG-KFEKTISGHKLGISDVAWSS--DS 81
GHT V SV SP+ + S S DK IKIW K+ T GH +S V +S D+
Sbjct: 103 GHTSDVLSVSISPDNRQVVSGSRDKTIKIWNIIGNCKYTITDGGHSDWVSCVRFSPNPDN 162
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
VS DK +K+W+L + + GH+ YV +P +L SG D ++ +WD+
Sbjct: 163 LTFVSAGWDKAVKVWDLETFSLRTSHYGHTGYVSAVTISPDGSLCASGGRDGTLMLWDLN 222
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD------- 194
L +L A ++ ++A+ F+ + + +++ + RI+D + + + L D
Sbjct: 223 ESTHLYSLEAKAN-INALVFSPNRYWLCAATGSSI-RIFDLETQEKVDELTVDFVGVGKK 280
Query: 195 -DNPPVSFVKFSPNGKYILAATLDNTLKLW 223
P + +SP+G+ + + DN +++W
Sbjct: 281 SSEPECISLTWSPDGQTLFSGWTDNLIRVW 310
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 320 (117.7 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 67/198 (33%), Positives = 107/198 (54%)
Query: 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV 85
HT V SV FS +G++L ++S DK IK+W Y +F ++ H + +S D RL+V
Sbjct: 101 HTAPVRSVDFSADGQFLVTASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIV 160
Query: 86 SGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 145
S S+DKT+KIW+ +S +C+ + +F+P I S D +VRIWD+R +
Sbjct: 161 SCSEDKTIKIWDTTSKQCVNNFSDSVGFANFVDFSPNGTCIASAGSDHAVRIWDIRMNRL 220
Query: 146 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 205
L+ HS V+ + F+ G+ +V++S DG +I D G+ + TL PV V FS
Sbjct: 221 LQHYQVHSCGVNCLSFHPSGNSLVTASSDGTVKILDLVEGRLIYTL-QGHTGPVFTVSFS 279
Query: 206 PNGKYILAATLDNTLKLW 223
+G+ + D + +W
Sbjct: 280 KDGELFTSGGADAQVLVW 297
Score = 310 (114.2 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 65/205 (31%), Positives = 114/205 (55%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT-ISGHKLGISDVAWSS 79
+ GH V+S++FSP G LAS+S DK +++W D K + + H + V +S+
Sbjct: 54 YRYVGHKDVVTSLQFSPQGNLLASASRDKTVRLW-VLDRKGKSSEFKAHTAPVRSVDFSA 112
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
D + LV+ S+DK++K+W + + L +L H+++V C F+P LIVS S D++++IWD
Sbjct: 113 DGQFLVTASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWD 172
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
+ +C+ + V F+ +G+ I S+ D RIWD + L+ + V
Sbjct: 173 TTSKQCVNNFSDSVGFANFVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHY-QVHSCGV 231
Query: 200 SFVKFSPNGKYILAATLDNTLKLWD 224
+ + F P+G ++ A+ D T+K+ D
Sbjct: 232 NCLSFHPSGNSLVTASSDGTVKILD 256
Score = 310 (114.2 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 70/211 (33%), Positives = 112/211 (53%)
Query: 18 VLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW 77
+L+ GH A++S FSPN + +A++S D + +W GHK ++ + +
Sbjct: 9 ILERYFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQF 68
Query: 78 SSDSRLLVSGSDDKTLKIWELS-SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 136
S LL S S DKT+++W L GK + K H+ V +F+ +V+ S D+S++
Sbjct: 69 SPQGNLLASASRDKTVRLWVLDRKGKSSE-FKAHTAPVRSVDFSADGQFLVTASEDKSIK 127
Query: 137 IWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 196
+W + + L +L H+ V F+ DG LIVS S D +IWDT S QC+ D
Sbjct: 128 VWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNFSDSVG 187
Query: 197 PPVSFVKFSPNGKYILAATLDNTLKLWDSKV 227
+FV FSPNG I +A D+ +++WD ++
Sbjct: 188 F-ANFVDFSPNGTCIASAGSDHAVRIWDIRM 217
Score = 250 (93.1 bits), Expect = 9.8e-21, P = 9.8e-21
Identities = 55/167 (32%), Positives = 87/167 (52%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISD-VAWSS 79
++L HT V KFSP+G + S S DK IKIW + S +G ++ V +S
Sbjct: 138 YSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNFSD-SVGFANFVDFSP 196
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
+ + S D ++IW++ + L+ + HS V C +F+P N +V+ S D +V+I D
Sbjct: 197 NGTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLSFHPSGNSLVTASSDGTVKILD 256
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 186
+ G+ + TL H+ PV V F++DG L S D +W T+ Q
Sbjct: 257 LVEGRLIYTLQGHTGPVFTVSFSKDGELFTSGGADAQVLVWRTSFNQ 303
Score = 244 (91.0 bits), Expect = 4.5e-20, P = 4.5e-20
Identities = 56/172 (32%), Positives = 91/172 (52%)
Query: 55 GAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYV 114
G D E+ GHK I+ +S + + + + S D L +W L GH + V
Sbjct: 4 GPEDPILERYFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVV 63
Query: 115 FCCNFNPQSNLIVSGSFDESVRIWDV-RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY 173
F+PQ NL+ S S D++VR+W + R GK + AH+ PV +V F+ DG +V++S
Sbjct: 64 TSLQFSPQGNLLASASRDKTVRLWVLDRKGKSSE-FKAHTAPVRSVDFSADGQFLVTASE 122
Query: 174 DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225
D ++W + L +L + V KFSP+G+ I++ + D T+K+WD+
Sbjct: 123 DKSIKVWSMYRQRFLYSLYRHTHW-VRCAKFSPDGRLIVSCSEDKTIKIWDT 173
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 327 (120.2 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 66/202 (32%), Positives = 102/202 (50%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
L GH+ V V FSP+ +L SSS D I++W GH + D +S
Sbjct: 495 LHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLVGYKGHNYPVWDTQFSPFGY 554
Query: 83 LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 142
VSG D+ ++W + L+ GH V C F+P SN + +GS D +VR+WDV
Sbjct: 555 YFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYVATGSSDRTVRLWDVLN 614
Query: 143 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 202
G C++ H P+ ++ F+ +G + S S DG +WD G + L + +
Sbjct: 615 GNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDIGHGLMIAEL-KGHTGTIYAL 673
Query: 203 KFSPNGKYILAATLDNTLKLWD 224
KFS +G+ I + ++DNT++LWD
Sbjct: 674 KFSRDGEIIASGSIDNTVRLWD 695
Score = 261 (96.9 bits), Expect = 2.0e-21, P = 2.0e-21
Identities = 56/197 (28%), Positives = 95/197 (48%)
Query: 28 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSG 87
K + VK + + + S D L +I K + GH + V++S D L+S
Sbjct: 458 KKLRKVKSAADLNLIDKESDDVLERIMDEKTSSESKILHGHSGPVYGVSFSPDRNYLLSS 517
Query: 88 SDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLK 147
S+D T+++W L + CL KGH+ V+ F+P VSG D R+W + L+
Sbjct: 518 SEDGTIRLWSLQTFTCLVGYKGHNYPVWDTQFSPFGYYFVSGGHDRVARLWATDHYQPLR 577
Query: 148 TLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPN 207
H V+ F+ + + + + S D R+WD +G C++ + P+ + FSPN
Sbjct: 578 IFAGHLADVTCTRFHPNSNYVATGSSDRTVRLWDVLNGNCVR-IFTGHKGPIHSLAFSPN 636
Query: 208 GKYILAATLDNTLKLWD 224
GK++ + + D + LWD
Sbjct: 637 GKFLASGSTDGRVLLWD 653
Score = 236 (88.1 bits), Expect = 1.8e-20, Sum P(2) = 1.8e-20
Identities = 40/117 (34%), Positives = 69/117 (58%)
Query: 24 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRL 83
AGH V+ +F PN ++A+ S+D+ +++W +G + +GHK I +A+S + +
Sbjct: 580 AGHLADVTCTRFHPNSNYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKF 639
Query: 84 LVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 140
L SGS D + +W++ G + LKGH+ ++ F+ +I SGS D +VR+WDV
Sbjct: 640 LASGSTDGRVLLWDIGHGLMIAELKGHTGTIYALKFSRDGEIIASGSIDNTVRLWDV 696
Score = 233 (87.1 bits), Expect = 2.0e-18, P = 2.0e-18
Identities = 56/204 (27%), Positives = 96/204 (47%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 80
+T + +++V F+ + +A AD +++W K K S ++D
Sbjct: 420 YTFLNAYQGLTAVDFTDDSSLIAGGFADSTVRVWSVTPKKLRKVKS-----------AAD 468
Query: 81 SRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 140
L+ SDD +I + + K L GHS V+ +F+P N ++S S D ++R+W +
Sbjct: 469 LNLIDKESDDVLERIMDEKTSSESKILHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSL 528
Query: 141 RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 200
+T CL H+ PV F+ G VS +D + R+W T Q L+ + V+
Sbjct: 529 QTFTCLVGYKGHNYPVWDTQFSPFGYYFVSGGHDRVARLWATDHYQPLR-IFAGHLADVT 587
Query: 201 FVKFSPNGKYILAATLDNTLKLWD 224
+F PN Y+ + D T++LWD
Sbjct: 588 CTRFHPNSNYVATGSSDRTVRLWD 611
Score = 120 (47.3 bits), Expect = 0.00018, P = 0.00018
Identities = 40/127 (31%), Positives = 59/127 (46%)
Query: 103 CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFN 162
C T + +F S+LI G D +VR+W V T K L+ + SA N
Sbjct: 418 CFYTFLNAYQGLTAVDFTDDSSLIAGGFADSTVRVWSV-TPKKLRKVK------SAADLN 470
Query: 163 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 222
LI S D L RI D + K ++ + PV V FSP+ Y+L+++ D T++L
Sbjct: 471 ----LIDKESDDVLERIMDEKTSSESK-ILHGHSGPVYGVSFSPDRNYLLSSSEDGTIRL 525
Query: 223 WDSKVVT 229
W + T
Sbjct: 526 WSLQTFT 532
Score = 41 (19.5 bits), Expect = 1.8e-20, Sum P(2) = 1.8e-20
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 146 LKTLPAHSDPVSAVHFNRDGSLIVSSSYD 174
L T + S V +HF R L+ + SY+
Sbjct: 726 LGTYHSKSTAVIHLHFTRRNLLLAAGSYN 754
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 327 (120.2 bits), Expect = 1.6e-28, P = 1.6e-28
Identities = 76/222 (34%), Positives = 126/222 (56%)
Query: 25 GHTKAVSSVKFSP---NG--EWLASSSADKLIKIW--GAYDGK--FEK----TISGHKLG 71
GHT +V++V P NG +LASSS D+ +K + G+ K F TI H
Sbjct: 408 GHTASVTAVALGPLDVNGYPTFLASSSQDRTLKRFNLGSQLNKSDFSNRAVWTIKAHDRD 467
Query: 72 ISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 131
++ + S D R++ S S DKT+K+W+ S+G+ + L+GH V+ C+FNP S + SGS
Sbjct: 468 VNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQLASGSG 527
Query: 132 DESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 191
D ++RIW+V T +C++TL H+ + + + G+ +VS++ DGL ++W +SG+C+ TL
Sbjct: 528 DRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSLSSGECVATL 587
Query: 192 IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAII 233
D+ V + +G +++ D + +W K VT I
Sbjct: 588 -DNHEDRVWALASRFDGSLLVSGGADAVVSVW--KDVTEEYI 626
Score = 294 (108.6 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 54/160 (33%), Positives = 97/160 (60%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 80
+T+ H + V++++ S +G +AS+S DK IK+W + G+ + GH+ G+ +++
Sbjct: 459 WTIKAHDRDVNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPF 518
Query: 81 SRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 140
SR L SGS D+T++IW + + +C++TL+GH+ + + Q +VS + D V++W +
Sbjct: 519 SRQLASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSL 578
Query: 141 RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 180
+G+C+ TL H D V A+ DGSL+VS D + +W
Sbjct: 579 SSGECVATLDNHEDRVWALASRFDGSLLVSGGADAVVSVW 618
Score = 222 (83.2 bits), Expect = 3.1e-17, P = 3.1e-17
Identities = 49/194 (25%), Positives = 96/194 (49%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
++ H V ++ P LA+ A+ L+K+W + GH IS + +
Sbjct: 98 SMKAHETPVITMTIDPTNTLLATGGAEGLVKVWDIAGAYVTHSFRGHGGVISALCFGKHQ 157
Query: 82 R--LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
+L SG+DD +++W+L+S + + +GHS+ + F P + ++SGS D++V++W+
Sbjct: 158 NTWVLASGADDSRVRLWDLNSSRSMAVFEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWN 217
Query: 140 VRTGKCLKTLPA-HS-DPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID---- 193
++ ++T+P HS + + V+ + ++ ++ L WD SG L +D
Sbjct: 218 IKKRSAVRTIPVFHSVEAIGWVNGQPEEKILYTAGEGNLILAWDWKSGSRLDPGVDTTHS 277
Query: 194 DDNPPVSFVKFSPN 207
+ N + V FS N
Sbjct: 278 ETNAIIQVVPFSEN 291
Score = 201 (75.8 bits), Expect = 5.6e-15, P = 5.6e-15
Identities = 48/199 (24%), Positives = 100/199 (50%)
Query: 33 VKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG---ISDVAWSSDSRLLVSGSD 89
V F N + L ++ D++I G E+ S K ++ +A +SDS+ L++
Sbjct: 25 VAFDSNEKILVTALTDRII---GTRSETGERLFSIKKDEDDYVTALAITSDSKKLIAAFR 81
Query: 90 DKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTL 149
+ L I+E+ SG+ +K++K H V +P + L+ +G + V++WD+ +
Sbjct: 82 SRLLTIYEIPSGRRIKSMKAHETPVITMTIDPTNTLLATGGAEGLVKVWDIAGAYVTHSF 141
Query: 150 PAHSDPVSAVHFNRDGS--LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPN 207
H +SA+ F + + ++ S + D R+WD S + + + + + + + F P
Sbjct: 142 RGHGGVISALCFGKHQNTWVLASGADDSRVRLWDLNSSRSM-AVFEGHSSVIRGLTFEPT 200
Query: 208 GKYILAATLDNTLKLWDSK 226
G ++L+ + D T+++W+ K
Sbjct: 201 GSFLLSGSRDKTVQVWNIK 219
Score = 195 (73.7 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 41/200 (20%), Positives = 92/200 (46%)
Query: 30 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSD 89
V+++ + + + L ++ +L+ I+ G+ K++ H+ + + + LL +G
Sbjct: 64 VTALAITSDSKKLIAAFRSRLLTIYEIPSGRRIKSMKAHETPVITMTIDPTNTLLATGGA 123
Query: 90 DKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSN--LIVSGSFDESVRIWDVRTGKCLK 147
+ +K+W+++ + +GH + F N ++ SG+ D VR+WD+ + + +
Sbjct: 124 EGLVKVWDIAGAYVTHSFRGHGGVISALCFGKHQNTWVLASGADDSRVRLWDLNSSRSMA 183
Query: 148 TLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL-IDDDNPPVSFVKFSP 206
HS + + F GS ++S S D ++W+ ++T+ + + +V P
Sbjct: 184 VFEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWNIKKRSAVRTIPVFHSVEAIGWVNGQP 243
Query: 207 NGKYILAATLDNTLKLWDSK 226
K + A N + WD K
Sbjct: 244 EEKILYTAGEGNLILAWDWK 263
Score = 134 (52.2 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 55/223 (24%), Positives = 97/223 (43%)
Query: 22 TLAGHTKAVSSV-KFSPNGEWLASSSADKLIKIWGAYDGKFE-KTISGHKLGISDVAWSS 79
T T A+ V FS N S L++ +G K ++G + D AW
Sbjct: 274 TTHSETNAIIQVVPFSENTLLSVHSDLSLLLRKRVPGEGFITIKKLNGSFDEVIDCAWIG 333
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
D L V S+ + + + + L+GH++ V + + + +G+ D +VR+W+
Sbjct: 334 DDHLAVC-SNTEFIDVISTDGTQVFGVLEGHTDIVLTLDSSEDGVWLATGAKDNTVRLWN 392
Query: 140 VRTG----KCLKTLPAHSDPVSAVHF-----NRDGSLIVSSSYDGLCRIWDTASGQCLKT 190
+ KC+ H+ V+AV N + + SSS D + ++ S Q K+
Sbjct: 393 LNIEDNVYKCIHVFTGHTASVTAVALGPLDVNGYPTFLASSSQDRTLKRFNLGS-QLNKS 451
Query: 191 --------LIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225
I + V+ ++ S +G+ I +A+ D T+KLWDS
Sbjct: 452 DFSNRAVWTIKAHDRDVNAIQVSKDGRIIASASQDKTIKLWDS 494
Score = 124 (48.7 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 25/76 (32%), Positives = 41/76 (53%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GHT A+ + + G + S++AD L+K+W G+ T+ H+ + +A D
Sbjct: 544 TLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSLSSGECVATLDNHEDRVWALASRFDG 603
Query: 82 RLLVSGSDDKTLKIWE 97
LLVSG D + +W+
Sbjct: 604 SLLVSGGADAVVSVWK 619
Score = 114 (45.2 bits), Expect = 0.00090, P = 0.00090
Identities = 46/212 (21%), Positives = 87/212 (41%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS---DS 81
GH+ + + F P G +L S S DK +++W +TI + + W + +
Sbjct: 187 GHSSVIRGLTFEPTGSFLLSGSRDKTVQVWNIKKRSAVRTIPVFH-SVEAIGWVNGQPEE 245
Query: 82 RLLVSGSDDKTLKIWELSSGKCLK--TLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIW 138
++L + + + W+ SG L HS P S N ++S D S+ +
Sbjct: 246 KILYTAGEGNLILAWDWKSGSRLDPGVDTTHSETNAIIQVVPFSENTLLSVHSDLSLLLR 305
Query: 139 DVRTGK---CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD 195
G+ +K L D V + D L V S+ + + I + G + +++
Sbjct: 306 KRVPGEGFITIKKLNGSFDEVIDCAWIGDDHLAVCSNTEFIDVI--STDGTQVFGVLEGH 363
Query: 196 NPPVSFVKFSPNGKYILAATLDNTLKLWDSKV 227
V + S +G ++ DNT++LW+ +
Sbjct: 364 TDIVLTLDSSEDGVWLATGAKDNTVRLWNLNI 395
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 322 (118.4 bits), Expect = 3.9e-28, P = 3.9e-28
Identities = 66/202 (32%), Positives = 107/202 (52%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
L GH+ V S FSP G+++ SSSAD I++W GH + D +S
Sbjct: 414 LLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGH 473
Query: 83 LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 142
S S D+T +IW + + L+ + GH + V C ++P N I +GS D++VR+WDV+T
Sbjct: 474 YFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQT 533
Query: 143 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 202
G+C++ H V ++ + DG + S DG +WD ++ +C+ L+ N V +
Sbjct: 534 GECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGH-NSCVWSL 592
Query: 203 KFSPNGKYILAATLDNTLKLWD 224
+S G + + + D T+KLWD
Sbjct: 593 SYSGEGSLLASGSADCTVKLWD 614
Score = 271 (100.5 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 51/172 (29%), Positives = 92/172 (53%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLL 84
GH V +FSP G + AS S D+ +IW + + ++GH + V W + +
Sbjct: 458 GHNYPVWDAQFSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYI 517
Query: 85 VSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK 144
+GS DKT+++W++ +G+C++ GH + V +P + SG D ++ +WD+ T +
Sbjct: 518 ATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTAR 577
Query: 145 CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 196
C+ L H+ V ++ ++ +GSL+ S S D ++WD S L T ++ N
Sbjct: 578 CITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDVTSSTKL-TKAEEKN 628
Score = 251 (93.4 bits), Expect = 1.8e-20, P = 1.8e-20
Identities = 51/166 (30%), Positives = 93/166 (56%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
+AGH V V++ PN ++A+ S+DK +++W G+ + GH+ + +A S D R
Sbjct: 498 MAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGR 557
Query: 83 LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV-- 140
+ SG +D T+ +W+LS+ +C+ L GH++ V+ +++ + +L+ SGS D +V++WDV
Sbjct: 558 YMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDVTS 617
Query: 141 ---------RTG-----KCLKTLPAHSDPVSAVHFNRDGSLIVSSS 172
+ G + L+T P S PV A+ F+R L + +
Sbjct: 618 STKLTKAEEKNGNSNRLRSLRTFPTKSTPVHALRFSRRNLLFAAGA 663
Score = 115 (45.5 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 29/91 (31%), Positives = 42/91 (46%)
Query: 149 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG 208
L HS PV + F+ G ++SSS D R+W T L N PV +FSP G
Sbjct: 414 LLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANL-VCYKGHNYPVWDAQFSPFG 472
Query: 209 KYILAATLDNTLKLWDSKVVTPAIICSTPLN 239
Y + + D T ++W + P I + L+
Sbjct: 473 HYFASCSHDRTARIWSMDRIQPLRIMAGHLS 503
Score = 55 (24.4 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 8/29 (27%), Positives = 17/29 (58%)
Query: 112 NYVFCCNFNPQSNLIVSGSFDESVRIWDV 140
N + C + + +L+ G D S+++WD+
Sbjct: 353 NGLNCSSISHDGSLVAGGFSDSSIKVWDM 381
Score = 54 (24.1 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 10/39 (25%), Positives = 22/39 (56%)
Query: 61 FEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELS 99
F ++ H G++ + S D L+ G D ++K+W+++
Sbjct: 345 FYTFVNTHN-GLNCSSISHDGSLVAGGFSDSSIKVWDMA 382
Score = 43 (20.2 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 18/73 (24%), Positives = 29/73 (39%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 80
+T ++ S +G +A +D IK+W K + SG +D SSD
Sbjct: 346 YTFVNTHNGLNCSSISHDGSLVAGGFSDSSIKVWDM--AKIGQAGSGALQAEND---SSD 400
Query: 81 SRLLVSGSDDKTL 93
+ +G TL
Sbjct: 401 QSIGPNGRRSYTL 413
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
Identities = 67/205 (32%), Positives = 114/205 (55%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKLGISDVAWSS 79
+ GH AV+ V+FSP+ LASSS DK +++W K E + H + V +S+
Sbjct: 54 YRFTGHKDAVTCVQFSPSAHLLASSSRDKTVRLW-VPSVKGESVLFRAHTGSVRSVCFSA 112
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
D + L++ SDD+++K+W + K + TL+ H+N+V C F+P L+VS S D +V++WD
Sbjct: 113 DGQSLLTASDDQSIKLWSVHRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWD 172
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
+ + + T S V F+ + I ++S D R+WD + L+ + V
Sbjct: 173 ASSRQLIHTFCEPGGYSSYVDFHPSSTCIATASSDNTVRVWDIRTHTLLQHY-QVHSAAV 231
Query: 200 SFVKFSPNGKYILAATLDNTLKLWD 224
+ + F P+G ++L A+ D+TLK+ D
Sbjct: 232 NALSFHPSGNHLLTASSDSTLKILD 256
Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
Identities = 67/212 (31%), Positives = 113/212 (53%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L+ GH A++S+ FSP+G+ +AS S D + +W +GHK ++ V +S
Sbjct: 10 LERNFKGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFS 69
Query: 79 SDSRLLVSGSDDKTLKIWELS-SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 137
+ LL S S DKT+++W S G+ + + H+ V F+ +++ S D+S+++
Sbjct: 70 PSAHLLASSSRDKTVRLWVPSVKGESV-LFRAHTGSVRSVCFSADGQSLLTASDDQSIKL 128
Query: 138 WDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 197
W V K + TL H++ V F+ DG L+VS S D ++WD +S Q + T +
Sbjct: 129 WSVHRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEPGGY 188
Query: 198 PVSFVKFSPNGKYILAATLDNTLKLWDSKVVT 229
S+V F P+ I A+ DNT+++WD + T
Sbjct: 189 S-SYVDFHPSSTCIATASSDNTVRVWDIRTHT 219
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 70/201 (34%), Positives = 112/201 (55%)
Query: 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV 85
HT +V SV FS +G+ L ++S D+ IK+W + K T+ H + +S D +L+V
Sbjct: 101 HTGSVRSVCFSADGQSLLTASDDQSIKLWSVHRQKIICTLREHNNWVRCARFSPDGQLMV 160
Query: 86 SGSDDKTLKIWELSSGKCLKTL---KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 142
S SDD+T+K+W+ SS + + T G+S+YV +F+P S I + S D +VR+WD+RT
Sbjct: 161 SVSDDRTVKLWDASSRQLIHTFCEPGGYSSYV---DFHPSSTCIATASSDNTVRVWDIRT 217
Query: 143 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 202
L+ HS V+A+ F+ G+ ++++S D +I D G+ L TL S V
Sbjct: 218 HTLLQHYQVHSAAVNALSFHPSGNHLLTASSDSTLKILDLLEGRLLYTLHGHQGS-ASCV 276
Query: 203 KFSPNGKYILAATLDNTLKLW 223
FS +G +A D + +W
Sbjct: 277 SFSRSGDQFASAGSDQQVMVW 297
Score = 232 (86.7 bits), Expect = 5.8e-19, P = 5.8e-19
Identities = 51/169 (30%), Positives = 93/169 (55%)
Query: 58 DGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCC 117
D E+ GH+ I+ + +S + + SGS D ++ +W + GH + V C
Sbjct: 7 DPTLERNFKGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCV 66
Query: 118 NFNPQSNLIVSGSFDESVRIWDVRTGKCLKTL-PAHSDPVSAVHFNRDGSLIVSSSYDGL 176
F+P ++L+ S S D++VR+W V + K L AH+ V +V F+ DG ++++S D
Sbjct: 67 QFSPSAHLLASSSRDKTVRLW-VPSVKGESVLFRAHTGSVRSVCFSADGQSLLTASDDQS 125
Query: 177 CRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225
++W + + TL + +N V +FSP+G+ +++ + D T+KLWD+
Sbjct: 126 IKLWSVHRQKIICTLREHNNW-VRCARFSPDGQLMVSVSDDRTVKLWDA 173
Score = 210 (79.0 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 47/161 (29%), Positives = 79/161 (49%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL H V +FSP+G+ + S S D+ +K+W A + T S V + S
Sbjct: 139 TLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEPGGYSSYVDFHPSS 198
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
+ + S D T+++W++ + L+ + HS V +F+P N +++ S D +++I D+
Sbjct: 199 TCIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNALSFHPSGNHLLTASSDSTLKILDLL 258
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 182
G+ L TL H S V F+R G S+ D +W T
Sbjct: 259 EGRLLYTLHGHQGSASCVSFSRSGDQFASAGSDQQVMVWRT 299
>UNIPROTKB|Q3MHE2 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9913 "Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 HSSP:P63005 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
EMBL:BC105270 IPI:IPI00688145 RefSeq:NP_001029502.1
UniGene:Bt.16360 ProteinModelPortal:Q3MHE2 SMR:Q3MHE2 STRING:Q3MHE2
PRIDE:Q3MHE2 Ensembl:ENSBTAT00000006004 GeneID:508735
KEGG:bta:508735 CTD:9128 GeneTree:ENSGT00690000101787
HOVERGEN:HBG030892 InParanoid:Q3MHE2 OMA:CKIWDLR OrthoDB:EOG45DWP9
NextBio:20868661 Uniprot:Q3MHE2
Length = 521
Score = 316 (116.3 bits), Expect = 6.7e-28, P = 6.7e-28
Identities = 64/205 (31%), Positives = 113/205 (55%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI---SGHKLGISDVAWSS 79
+ GHT V+ V + P+G +L ++ D+ ++W D + ++ I GH +G+ D+A+
Sbjct: 318 IEGHTVRVARVTWHPSGRFLGTTCYDRSWRLW---DLEAQEEILHQEGHSMGVYDIAFHQ 374
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
D L +G D ++W+L +G+C+ L+GH ++ NF+P I +GS D + ++WD
Sbjct: 375 DGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWD 434
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 198
+R +C+ T+PAH + V+ V F G+ +++ +YD +IW LKTL +
Sbjct: 435 LRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGK- 493
Query: 199 VSFVKFSPNGKYILAATLDNTLKLW 223
V + S +G+ I + D T KLW
Sbjct: 494 VMGLDISSDGQLIATCSYDRTFKLW 518
Score = 296 (109.3 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 65/214 (30%), Positives = 108/214 (50%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEW--------LASSSADKLIKIWGAYDGKFEKTISGHKL 70
L TL GH V ++ F P LAS +AD +K+W + I GH +
Sbjct: 264 LLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTV 323
Query: 71 GISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 130
++ V W R L + D++ ++W+L + + + +GHS V+ F+ +L +G
Sbjct: 324 RVARVTWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGG 383
Query: 131 FDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 190
D R+WD+RTG+C+ L H + ++F+ +G I + S D C++WD +C+ T
Sbjct: 384 LDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYT 443
Query: 191 LIDDDNPPVSFVKFSP-NGKYILAATLDNTLKLW 223
+ N V+ VKF P +G ++L DNT K+W
Sbjct: 444 IPAHQNL-VTGVKFEPIHGNFLLTGAYDNTAKIW 476
Score = 261 (96.9 bits), Expect = 8.1e-22, P = 8.1e-22
Identities = 59/208 (28%), Positives = 102/208 (49%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRL- 83
G + +S FSPN + LA++ L K+W D T+ GH + + + S +
Sbjct: 228 GDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVS 287
Query: 84 -------LVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 136
L S + D ++K+W L S + + ++GH+ V ++P + + +D S R
Sbjct: 288 LDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVTWHPSGRFLGTTCYDRSWR 347
Query: 137 IWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 196
+WD+ + + HS V + F++DGSL + D R+WD +G+C+ L +
Sbjct: 348 LWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFL-EGHL 406
Query: 197 PPVSFVKFSPNGKYILAATLDNTLKLWD 224
+ + FSPNG +I + DNT K+WD
Sbjct: 407 KEIYGINFSPNGYHIATGSGDNTCKVWD 434
>UNIPROTKB|O43172 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9606 "Homo sapiens" [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=NAS] [GO:0005681 "spliceosomal complex"
evidence=IC;NAS] [GO:0008380 "RNA splicing" evidence=NAS;TAS]
[GO:0006396 "RNA processing" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0015030 "Cajal body" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0071001 "U4/U6 snRNP"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 EMBL:AF001687 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471090 Reactome:REACT_1675
GO:GO:0005681 GO:GO:0015030 GO:GO:0000398 InterPro:IPR027106
PANTHER:PTHR19846 EMBL:AL449305 GO:GO:0071001 PDB:1MZW PDBsum:1MZW
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 HOVERGEN:HBG030892 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:AF016369 EMBL:U82756 EMBL:BC001588 EMBL:BC007424
IPI:IPI00150269 IPI:IPI00218435 RefSeq:NP_001231855.1
RefSeq:NP_004688.2 UniGene:Hs.374973 ProteinModelPortal:O43172
SMR:O43172 IntAct:O43172 MINT:MINT-270624 STRING:O43172
PhosphoSite:O43172 PaxDb:O43172 PRIDE:O43172 DNASU:9128
Ensembl:ENST00000374198 Ensembl:ENST00000374199 GeneID:9128
KEGG:hsa:9128 UCSC:uc004bgx.3 GeneCards:GC09P116037 HGNC:HGNC:17349
HPA:HPA021794 HPA:HPA022248 MIM:607795 neXtProt:NX_O43172
PharmGKB:PA38448 InParanoid:O43172 PhylomeDB:O43172
BindingDB:O43172 ChEMBL:CHEMBL1163119 EvolutionaryTrace:O43172
GenomeRNAi:9128 NextBio:34217 ArrayExpress:O43172 Bgee:O43172
CleanEx:HS_PRPF4 Genevestigator:O43172 GermOnline:ENSG00000136875
Uniprot:O43172
Length = 522
Score = 316 (116.3 bits), Expect = 6.7e-28, P = 6.7e-28
Identities = 64/205 (31%), Positives = 113/205 (55%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI---SGHKLGISDVAWSS 79
+ GHT V+ V + P+G +L ++ D+ ++W D + ++ I GH +G+ D+A+
Sbjct: 319 IEGHTVRVARVMWHPSGRFLGTTCYDRSWRLW---DLEAQEEILHQEGHSMGVYDIAFHQ 375
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
D L +G D ++W+L +G+C+ L+GH ++ NF+P I +GS D + ++WD
Sbjct: 376 DGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWD 435
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 198
+R +C+ T+PAH + V+ V F G+ +++ +YD +IW LKTL +
Sbjct: 436 LRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGK- 494
Query: 199 VSFVKFSPNGKYILAATLDNTLKLW 223
V + S +G+ I + D T KLW
Sbjct: 495 VMGLDISSDGQLIATCSYDRTFKLW 519
Score = 295 (108.9 bits), Expect = 1.5e-25, P = 1.5e-25
Identities = 65/214 (30%), Positives = 108/214 (50%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEW--------LASSSADKLIKIWGAYDGKFEKTISGHKL 70
L TL GH V ++ F P LAS +AD +K+W + I GH +
Sbjct: 265 LLHTLRGHNTNVGAIVFHPKSTVSLDPKDVNLASCAADGSVKLWSLDSDEPVADIEGHTV 324
Query: 71 GISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 130
++ V W R L + D++ ++W+L + + + +GHS V+ F+ +L +G
Sbjct: 325 RVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGG 384
Query: 131 FDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 190
D R+WD+RTG+C+ L H + ++F+ +G I + S D C++WD +C+ T
Sbjct: 385 LDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYT 444
Query: 191 LIDDDNPPVSFVKFSP-NGKYILAATLDNTLKLW 223
+ N V+ VKF P +G ++L DNT K+W
Sbjct: 445 IPAHQNL-VTGVKFEPIHGNFLLTGAYDNTAKIW 477
Score = 259 (96.2 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 59/208 (28%), Positives = 102/208 (49%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRL- 83
G + +S FSPN + LA++ L K+W D T+ GH + + + S +
Sbjct: 229 GDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVS 288
Query: 84 -------LVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 136
L S + D ++K+W L S + + ++GH+ V ++P + + +D S R
Sbjct: 289 LDPKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWR 348
Query: 137 IWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 196
+WD+ + + HS V + F++DGSL + D R+WD +G+C+ L +
Sbjct: 349 LWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFL-EGHL 407
Query: 197 PPVSFVKFSPNGKYILAATLDNTLKLWD 224
+ + FSPNG +I + DNT K+WD
Sbjct: 408 KEIYGINFSPNGYHIATGSGDNTCKVWD 435
>UNIPROTKB|F1PZB0 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AAEX03008082
Ensembl:ENSCAFT00000005189 Uniprot:F1PZB0
Length = 537
Score = 316 (116.3 bits), Expect = 7.8e-28, P = 7.8e-28
Identities = 64/205 (31%), Positives = 113/205 (55%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI---SGHKLGISDVAWSS 79
+ GHT V+ V + P+G +L ++ D+ ++W D + ++ I GH +G+ D+A+
Sbjct: 334 IEGHTVRVARVMWHPSGRFLGTTCYDRSWRLW---DLEAQEEILHQEGHSMGVYDIAFHQ 390
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
D L +G D ++W+L +G+C+ L+GH ++ NF+P I +GS D + ++WD
Sbjct: 391 DGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWD 450
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 198
+R +C+ T+PAH + V+ V F G+ +++ +YD +IW LKTL +
Sbjct: 451 LRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGK- 509
Query: 199 VSFVKFSPNGKYILAATLDNTLKLW 223
V + S +G+ I + D T KLW
Sbjct: 510 VMGLDISSDGQLIATCSYDRTFKLW 534
Score = 295 (108.9 bits), Expect = 1.7e-25, P = 1.7e-25
Identities = 65/214 (30%), Positives = 108/214 (50%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEW--------LASSSADKLIKIWGAYDGKFEKTISGHKL 70
L TL GH V ++ F P LAS +AD +K+W + I GH +
Sbjct: 280 LLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTV 339
Query: 71 GISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 130
++ V W R L + D++ ++W+L + + + +GHS V+ F+ +L +G
Sbjct: 340 RVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGG 399
Query: 131 FDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 190
D R+WD+RTG+C+ L H + ++F+ +G I + S D C++WD +C+ T
Sbjct: 400 LDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYT 459
Query: 191 LIDDDNPPVSFVKFSP-NGKYILAATLDNTLKLW 223
+ N V+ VKF P +G ++L DNT K+W
Sbjct: 460 IPAHQNL-VTGVKFEPIHGNFLLTGAYDNTAKIW 492
Score = 259 (96.2 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 59/208 (28%), Positives = 102/208 (49%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRL- 83
G + +S FSPN + LA++ L K+W D T+ GH + + + S +
Sbjct: 244 GDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVS 303
Query: 84 -------LVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 136
L S + D ++K+W L S + + ++GH+ V ++P + + +D S R
Sbjct: 304 LDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWR 363
Query: 137 IWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 196
+WD+ + + HS V + F++DGSL + D R+WD +G+C+ L +
Sbjct: 364 LWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFL-EGHL 422
Query: 197 PPVSFVKFSPNGKYILAATLDNTLKLWD 224
+ + FSPNG +I + DNT K+WD
Sbjct: 423 KEIYGINFSPNGYHIATGSGDNTCKVWD 450
>UNIPROTKB|I3LDL8 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:FP339611
ProteinModelPortal:I3LDL8 Ensembl:ENSSSCT00000032454 Uniprot:I3LDL8
Length = 539
Score = 316 (116.3 bits), Expect = 8.0e-28, P = 8.0e-28
Identities = 64/205 (31%), Positives = 113/205 (55%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI---SGHKLGISDVAWSS 79
+ GHT V+ V + P+G +L ++ D+ ++W D + ++ I GH +G+ D+A+
Sbjct: 336 IEGHTVRVARVMWHPSGRFLGTTCYDRSWRLW---DLEAQEEILHQEGHSMGVYDIAFHQ 392
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
D L +G D ++W+L +G+C+ L+GH ++ NF+P I +GS D + ++WD
Sbjct: 393 DGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWD 452
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 198
+R +C+ T+PAH + V+ V F G+ +++ +YD +IW LKTL +
Sbjct: 453 LRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGK- 511
Query: 199 VSFVKFSPNGKYILAATLDNTLKLW 223
V + S +G+ I + D T KLW
Sbjct: 512 VMGLDISSDGQLIATCSYDRTFKLW 536
Score = 295 (108.9 bits), Expect = 1.7e-25, P = 1.7e-25
Identities = 65/214 (30%), Positives = 108/214 (50%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEW--------LASSSADKLIKIWGAYDGKFEKTISGHKL 70
L TL GH V ++ F P LAS +AD +K+W + I GH +
Sbjct: 282 LLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTV 341
Query: 71 GISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 130
++ V W R L + D++ ++W+L + + + +GHS V+ F+ +L +G
Sbjct: 342 RVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGG 401
Query: 131 FDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 190
D R+WD+RTG+C+ L H + ++F+ +G I + S D C++WD +C+ T
Sbjct: 402 LDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYT 461
Query: 191 LIDDDNPPVSFVKFSP-NGKYILAATLDNTLKLW 223
+ N V+ VKF P +G ++L DNT K+W
Sbjct: 462 IPAHQNL-VTGVKFEPIHGNFLLTGAYDNTAKIW 494
Score = 259 (96.2 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 59/208 (28%), Positives = 102/208 (49%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRL- 83
G + +S FSPN + LA++ L K+W D T+ GH + + + S +
Sbjct: 246 GDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVS 305
Query: 84 -------LVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 136
L S + D ++K+W L S + + ++GH+ V ++P + + +D S R
Sbjct: 306 LDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWR 365
Query: 137 IWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 196
+WD+ + + HS V + F++DGSL + D R+WD +G+C+ L +
Sbjct: 366 LWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFL-EGHL 424
Query: 197 PPVSFVKFSPNGKYILAATLDNTLKLWD 224
+ + FSPNG +I + DNT K+WD
Sbjct: 425 KEIYGINFSPNGYHIATGSGDNTCKVWD 452
>WB|WBGene00003047 [details] [associations]
symbol:lis-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040025
"vulval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007100 "mitotic
centrosome separation" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] [GO:0051026 "chiasma
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IGI;IMP] [GO:0048489 "synaptic vesicle transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005938
"cell cortex" evidence=IDA] [GO:0005818 "aster" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0009792 GO:GO:0000132 GO:GO:0035046 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0000776 GO:GO:0051301
GO:GO:0007052 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0048489
GO:GO:0005874 GO:GO:0040025 GO:GO:0043652 GO:GO:0005818
GO:GO:0007018 GO:GO:0000777 GO:GO:0051026 GO:GO:0051932 EMBL:Z81113
GO:GO:0007100 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AF164430 PIR:T24399
RefSeq:NP_499755.1 UniGene:Cel.19492 ProteinModelPortal:Q9NDC9
SMR:Q9NDC9 IntAct:Q9NDC9 STRING:Q9NDC9 PaxDb:Q9NDC9
EnsemblMetazoa:T03F6.5 GeneID:176758 KEGG:cel:CELE_T03F6.5
UCSC:T03F6.5 CTD:36791 WormBase:T03F6.5 InParanoid:Q9NDC9
NextBio:893884 Uniprot:Q9NDC9
Length = 404
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 63/189 (33%), Positives = 103/189 (54%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
L GH ++ V F P +AS S D IK+W G+ E+T+ GH ++D+A + +
Sbjct: 102 LTGHRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAIDAAGK 161
Query: 83 LLVSGSDDKTLKIWELSSG-KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
LVS S D ++K+W+ CLK+LKGH + V F P + ++S S D +++ WD+
Sbjct: 162 QLVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDIS 221
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 201
TG C+ T H+D V + + DG+L S+S D +W A+ + K ++ D V
Sbjct: 222 TGYCVYTFRGHNDWVRMIRISNDGTLFASASLDQTVTVWSFAT-KSAKLVLRDHEHAVEC 280
Query: 202 VKFSPNGKY 210
V+++P+ Y
Sbjct: 281 VEWAPDTAY 289
Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
Identities = 64/220 (29%), Positives = 109/220 (49%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
+L GH VSSV F P G+++ S+S D IK W G T GH + + S+D
Sbjct: 186 SLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRMIRISNDG 245
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNF------------NPQSN---LI 126
L S S D+T+ +W ++ L+ H + V C + P+ N ++
Sbjct: 246 TLFASASLDQTVTVWSFATKSAKLVLRDHEHAVECVEWAPDTAYTNVTGQQPEGNSTHIL 305
Query: 127 VSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 186
SGS D S++ W++ TG L TL AH + V + F+ G ++S + D R+W+ ++ +
Sbjct: 306 FSGSRDRSIKAWNINTGDVLFTLLAHENWVRGLAFHPKGKYLISVADDKTLRVWELSAQR 365
Query: 187 CLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSK 226
C+K I+ VS V F +++ ++D + K+W+ +
Sbjct: 366 CMKA-IEAHEHFVSTVAFHQTSPFVITGSVDMSCKVWECR 404
Score = 268 (99.4 bits), Expect = 3.5e-23, P = 3.5e-23
Identities = 66/223 (29%), Positives = 111/223 (49%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE--KTISGHKLGISDVA 76
L+ TL GHT AV+ + G+ L S S+D IK+W + ++ K++ GH+ +S V
Sbjct: 140 LERTLKGHTDAVNDIAIDAAGKQLVSCSSDLSIKLWD-FGQTYDCLKSLKGHEHTVSSVT 198
Query: 77 WSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 136
+ ++S S D T+K W++S+G C+ T +GH+++V + L S S D++V
Sbjct: 199 FLPTGDFVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRMIRISNDGTLFASASLDQTVT 258
Query: 137 IWDVRTGKCLKTLPAHSDPVSAVHFNRD------------GS---LIVSSSYDGLCRIWD 181
+W T L H V V + D G+ ++ S S D + W+
Sbjct: 259 VWSFATKSAKLVLRDHEHAVECVEWAPDTAYTNVTGQQPEGNSTHILFSGSRDRSIKAWN 318
Query: 182 TASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
+G L TL+ +N V + F P GKY+++ D TL++W+
Sbjct: 319 INTGDVLFTLLAHENW-VRGLAFHPKGKYLISVADDKTLRVWE 360
Score = 240 (89.5 bits), Expect = 6.4e-20, P = 6.4e-20
Identities = 47/176 (26%), Positives = 91/176 (51%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 80
+T GH V ++ S +G AS+S D+ + +W + + H+ + V W+ D
Sbjct: 227 YTFRGHNDWVRMIRISNDGTLFASASLDQTVTVWSFATKSAKLVLRDHEHAVECVEWAPD 286
Query: 81 S---------------RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNL 125
+ +L SGS D+++K W +++G L TL H N+V F+P+
Sbjct: 287 TAYTNVTGQQPEGNSTHILFSGSRDRSIKAWNINTGDVLFTLLAHENWVRGLAFHPKGKY 346
Query: 126 IVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181
++S + D+++R+W++ +C+K + AH VS V F++ +++ S D C++W+
Sbjct: 347 LISVADDKTLRVWELSAQRCMKAIEAHEHFVSTVAFHQTSPFVITGSVDMSCKVWE 402
Score = 188 (71.2 bits), Expect = 3.9e-14, P = 3.9e-14
Identities = 41/119 (34%), Positives = 67/119 (56%)
Query: 107 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGS 166
L GH + F+P ++ S S D ++++WD TG+ +TL H+D V+ + + G
Sbjct: 102 LTGHRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAIDAAGK 161
Query: 167 LIVSSSYDGLCRIWDTASG-QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
+VS S D ++WD CLK+L ++ VS V F P G ++L+A+ D+T+K WD
Sbjct: 162 QLVSCSSDLSIKLWDFGQTYDCLKSLKGHEHT-VSSVTFLPTGDFVLSASRDHTIKQWD 219
>ASPGD|ASPL0000014385 [details] [associations]
symbol:cpcB species:162425 "Emericella nidulans"
[GO:0034198 "cellular response to amino acid starvation"
evidence=IMP] [GO:0001965 "G-protein alpha-subunit binding"
evidence=IGI;ISS] [GO:0070798 "positive regulation of
cleistothecium development" evidence=IMP] [GO:0005622
"intracellular" evidence=IDA] [GO:0035690 "cellular response to
drug" evidence=IEP] [GO:0097308 "cellular response to farnesol"
evidence=IEP] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0005080 "protein kinase C binding" evidence=IEA] [GO:0070791
"cleistothecium development" evidence=IMP] [GO:0032995 "regulation
of fungal-type cell wall biogenesis" evidence=IEA] [GO:0031139
"positive regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032956 "regulation of actin cytoskeleton
organization" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001302
EMBL:AACD01000067 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
RefSeq:XP_661767.1 ProteinModelPortal:G5EB28 SMR:G5EB28
EnsemblFungi:CADANIAT00004509 GeneID:2873584 KEGG:ani:AN4163.2
Uniprot:G5EB28
Length = 316
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 69/209 (33%), Positives = 118/209 (56%)
Query: 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 79
K +L GH+ VS S +G + S+S DK +++W G+ +T GH + V++S+
Sbjct: 56 KRSLEGHSHIVSDCVISSDGAYALSASWDKSLRLWELSSGQTTRTFVGHTNDVLSVSFSA 115
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTL--KGHSNYVFCCNF--NPQSNLIVSGSFDESV 135
D+R +VSGS D+T+K+W + G C T+ KGH+ +V C F NPQ+ +IVS +D+ V
Sbjct: 116 DNRQIVSGSRDRTIKLWN-TLGDCKYTITDKGHTEWVSCVRFSPNPQNPVIVSAGWDKLV 174
Query: 136 RIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD 195
++W++ + + H+ ++ V + DGSL S DG+ +WD + L +L D
Sbjct: 175 KVWELASCRLQTDHIGHTGYINTVTISPDGSLCASGGKDGVTMLWDLNESKHLYSLHAGD 234
Query: 196 NPPVSFVKFSPNGKYILAATLDNTLKLWD 224
+ + FSPN +Y L A +++ ++D
Sbjct: 235 E--IHALVFSPN-RYWLCAATSSSITIFD 260
Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 78/218 (35%), Positives = 117/218 (53%)
Query: 18 VLKFTLAGHTKAVSSVKFS-PNGEWLASSSADKLIKIWG------AYDGKFEKTISGHKL 70
VL+ TL GH V+S+ S N L S S DK + IW AY G ++++ GH
Sbjct: 6 VLRGTLEGHNGWVTSLATSLENPNMLLSGSRDKTLIIWNLTRDEQAY-GYPKRSLEGHSH 64
Query: 71 GISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 130
+SD SSD +S S DK+L++WELSSG+ +T GH+N V +F+ + IVSGS
Sbjct: 65 IVSDCVISSDGAYALSASWDKSLRLWELSSGQTTRTFVGHTNDVLSVSFSADNRQIVSGS 124
Query: 131 FDESVRIWDVRTGKCLKTLP--AHSDPVSAVHF--NRDGSLIVSSSYDGLCRIWDTASGQ 186
D ++++W+ G C T+ H++ VS V F N +IVS+ +D L ++W+ AS +
Sbjct: 125 RDRTIKLWNT-LGDCKYTITDKGHTEWVSCVRFSPNPQNPVIVSAGWDKLVKVWELASCR 183
Query: 187 CLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
L+T ++ V SP+G + D LWD
Sbjct: 184 -LQTDHIGHTGYINTVTISPDGSLCASGGKDGVTMLWD 220
Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 60/213 (28%), Positives = 101/213 (47%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY-DGKFEKTISGHKLGISDVAWSSD 80
T GHT V SV FS + + S S D+ IK+W D K+ T GH +S V +S +
Sbjct: 100 TFVGHTNDVLSVSFSADNRQIVSGSRDRTIKLWNTLGDCKYTITDKGHTEWVSCVRFSPN 159
Query: 81 SR--LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
+ ++VS DK +K+WEL+S + GH+ Y+ +P +L SG D +W
Sbjct: 160 PQNPVIVSAGWDKLVKVWELASCRLQTDHIGHTGYINTVTISPDGSLCASGGKDGVTMLW 219
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL----IDD 194
D+ K L +L A D + A+ F+ + + +++ + I+D + L I+
Sbjct: 220 DLNESKHLYSLHA-GDEIHALVFSPNRYWLCAATSSSIT-IFDLEKKSKVDELKPEYIEK 277
Query: 195 DN----PPVSFVKFSPNGKYILAATLDNTLKLW 223
P + +S +G+ + A DN ++ W
Sbjct: 278 GKKSREPECVSLAWSADGQTLFAGYTDNKIRAW 310
Score = 174 (66.3 bits), Expect = 6.5e-13, P = 6.5e-13
Identities = 40/126 (31%), Positives = 75/126 (59%)
Query: 106 TLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVRT-----GKCLKTLPAHSDPVSAV 159
TL+GH+ +V + ++ N+++SGS D+++ IW++ G ++L HS VS
Sbjct: 10 TLEGHNGWVTSLATSLENPNMLLSGSRDKTLIIWNLTRDEQAYGYPKRSLEGHSHIVSDC 69
Query: 160 HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNT 219
+ DG+ +S+S+D R+W+ +SGQ +T + N +S V FS + + I++ + D T
Sbjct: 70 VISSDGAYALSASWDKSLRLWELSSGQTTRTFVGHTNDVLS-VSFSADNRQIVSGSRDRT 128
Query: 220 LKLWDS 225
+KLW++
Sbjct: 129 IKLWNT 134
>MGI|MGI:1917302 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog
(yeast)" species:10090 "Mus musculus" [GO:0000398 "mRNA splicing,
via spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=ISO] [GO:0046540 "U4/U6 x U5 tri-snRNP
complex" evidence=ISO] [GO:0071001 "U4/U6 snRNP" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 MGI:MGI:1917302 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:AK005464 EMBL:AK089838
EMBL:AK166912 EMBL:AK167216 EMBL:AK169532 EMBL:BC106089
IPI:IPI00458908 RefSeq:NP_081573.1 UniGene:Mm.30660
ProteinModelPortal:Q9DAW6 SMR:Q9DAW6 STRING:Q9DAW6
PhosphoSite:Q9DAW6 PaxDb:Q9DAW6 PRIDE:Q9DAW6
Ensembl:ENSMUST00000084524 GeneID:70052 KEGG:mmu:70052
InParanoid:Q9DAW6 ChiTaRS:PRPF4 NextBio:330897 Bgee:Q9DAW6
CleanEx:MM_PRPF4 Genevestigator:Q9DAW6
GermOnline:ENSMUSG00000066148 Uniprot:Q9DAW6
Length = 521
Score = 315 (115.9 bits), Expect = 8.7e-28, P = 8.7e-28
Identities = 64/205 (31%), Positives = 112/205 (54%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI---SGHKLGISDVAWSS 79
+ GHT V+ V + P+G +L ++ D+ ++W D + ++ I GH +G+ D+A+
Sbjct: 318 IEGHTVRVARVMWHPSGRFLGTTCYDRSWRLW---DLEAQEEILHQEGHSMGVYDIAFHQ 374
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
D L +G D ++W+L +G+C+ L+GH ++ NF+P I +GS D + ++WD
Sbjct: 375 DGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWD 434
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 198
+R +C+ T+PAH + V+ V F G +++ +YD +IW LKTL +
Sbjct: 435 LRQRRCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGK- 493
Query: 199 VSFVKFSPNGKYILAATLDNTLKLW 223
V + S +G+ I + D T KLW
Sbjct: 494 VMGLDISSDGQLIATCSYDRTFKLW 518
Score = 294 (108.6 bits), Expect = 1.9e-25, P = 1.9e-25
Identities = 65/214 (30%), Positives = 108/214 (50%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEW--------LASSSADKLIKIWGAYDGKFEKTISGHKL 70
L TL GH V ++ F P LAS +AD +K+W + I GH +
Sbjct: 264 LLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTV 323
Query: 71 GISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 130
++ V W R L + D++ ++W+L + + + +GHS V+ F+ +L +G
Sbjct: 324 RVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGG 383
Query: 131 FDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 190
D R+WD+RTG+C+ L H + ++F+ +G I + S D C++WD +C+ T
Sbjct: 384 LDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYT 443
Query: 191 LIDDDNPPVSFVKFSP-NGKYILAATLDNTLKLW 223
+ N V+ VKF P +G ++L DNT K+W
Sbjct: 444 IPAHQNL-VTGVKFEPIHGDFLLTGAYDNTAKIW 476
Score = 259 (96.2 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 59/208 (28%), Positives = 102/208 (49%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRL- 83
G + +S FSPN + LA++ L K+W D T+ GH + + + S +
Sbjct: 228 GDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCSLLHTLRGHNTNVGAIVFHPKSTVS 287
Query: 84 -------LVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 136
L S + D ++K+W L S + + ++GH+ V ++P + + +D S R
Sbjct: 288 LDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWR 347
Query: 137 IWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 196
+WD+ + + HS V + F++DGSL + D R+WD +G+C+ L +
Sbjct: 348 LWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFL-EGHL 406
Query: 197 PPVSFVKFSPNGKYILAATLDNTLKLWD 224
+ + FSPNG +I + DNT K+WD
Sbjct: 407 KEIYGINFSPNGYHIATGSGDNTCKVWD 434
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 312 (114.9 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 67/212 (31%), Positives = 112/212 (52%)
Query: 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV 85
HT V SV FS +G+ L ++S DK IK+W + +F ++ H + +S D RL+V
Sbjct: 101 HTAPVRSVDFSADGQLLVTASEDKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIV 160
Query: 86 SGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 145
S S+DKT+KIW+ ++ +C+ + +FNP I S D +V+IWD+R K
Sbjct: 161 SCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHAVKIWDIRMNKL 220
Query: 146 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 205
L+ HS V+ + F+ G+ +V++S DG ++ D G+ + TL PV V FS
Sbjct: 221 LQHYQVHSCGVNCLSFHPLGNSLVTASSDGTVKMLDLIEGRLIYTL-QGHTGPVFTVSFS 279
Query: 206 PNGKYILAATLDNTLKLWDSKVVTPAIICSTP 237
+G+ + + D + +W + + + C P
Sbjct: 280 KDGELLTSGGADAQVLIWRTNFIH--LHCKDP 309
Score = 310 (114.2 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 69/211 (32%), Positives = 114/211 (54%)
Query: 18 VLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW 77
+L+ + GH A++S FSPN + +A++S D + +W GHK ++ + +
Sbjct: 9 ILERSFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQF 68
Query: 78 SSDSRLLVSGSDDKTLKIWELS-SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 136
S LL S S D+T+++W L GK + K H+ V +F+ L+V+ S D+S++
Sbjct: 69 SPQGNLLASASRDRTVRLWVLDRKGKSSE-FKAHTAPVRSVDFSADGQLLVTASEDKSIK 127
Query: 137 IWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 196
+W + + L +L H+ V F+ DG LIVS S D +IWDT + QC+ D
Sbjct: 128 VWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVG 187
Query: 197 PPVSFVKFSPNGKYILAATLDNTLKLWDSKV 227
+FV F+PNG I +A D+ +K+WD ++
Sbjct: 188 F-ANFVDFNPNGTCIASAGSDHAVKIWDIRM 217
Score = 308 (113.5 bits), Expect = 3.0e-27, P = 3.0e-27
Identities = 65/205 (31%), Positives = 113/205 (55%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT-ISGHKLGISDVAWSS 79
+ GH V+S++FSP G LAS+S D+ +++W D K + + H + V +S+
Sbjct: 54 YRYVGHKDVVTSLQFSPQGNLLASASRDRTVRLW-VLDRKGKSSEFKAHTAPVRSVDFSA 112
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
D +LLV+ S+DK++K+W + + L +L H+++V C F+P LIVS S D++++IWD
Sbjct: 113 DGQLLVTASEDKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWD 172
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
+C+ + V FN +G+ I S+ D +IWD + L+ + V
Sbjct: 173 TTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHY-QVHSCGV 231
Query: 200 SFVKFSPNGKYILAATLDNTLKLWD 224
+ + F P G ++ A+ D T+K+ D
Sbjct: 232 NCLSFHPLGNSLVTASSDGTVKMLD 256
Score = 250 (93.1 bits), Expect = 9.8e-21, P = 9.8e-21
Identities = 57/172 (33%), Positives = 92/172 (53%)
Query: 55 GAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYV 114
G D E++ GHK I+ +S + + + + S D L +W L GH + V
Sbjct: 4 GLEDPILERSFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVV 63
Query: 115 FCCNFNPQSNLIVSGSFDESVRIWDV-RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY 173
F+PQ NL+ S S D +VR+W + R GK + AH+ PV +V F+ DG L+V++S
Sbjct: 64 TSLQFSPQGNLLASASRDRTVRLWVLDRKGKSSE-FKAHTAPVRSVDFSADGQLLVTASE 122
Query: 174 DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225
D ++W + L +L + V KFSP+G+ I++ + D T+K+WD+
Sbjct: 123 DKSIKVWSMFRQRFLYSLYRHTHW-VRCAKFSPDGRLIVSCSEDKTIKIWDT 173
Score = 248 (92.4 bits), Expect = 1.6e-20, P = 1.6e-20
Identities = 55/163 (33%), Positives = 87/163 (53%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISD-VAWSS 79
++L HT V KFSP+G + S S DK IKIW + + S +G ++ V ++
Sbjct: 138 YSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSD-SVGFANFVDFNP 196
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
+ + S D +KIW++ K L+ + HS V C +F+P N +V+ S D +V++ D
Sbjct: 197 NGTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCLSFHPLGNSLVTASSDGTVKMLD 256
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 182
+ G+ + TL H+ PV V F++DG L+ S D IW T
Sbjct: 257 LIEGRLIYTLQGHTGPVFTVSFSKDGELLTSGGADAQVLIWRT 299
>CGD|CAL0005939 [details] [associations]
symbol:TUP1 species:5476 "Candida albicans" [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IGI;ISS;IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0016337 "cell-cell adhesion" evidence=IMP]
[GO:0045827 "negative regulation of isoprenoid metabolic process"
evidence=IMP] [GO:0009372 "quorum sensing" evidence=IMP]
[GO:0044409 "entry into host" evidence=IMP] [GO:0051834 "evasion or
tolerance of defenses of other organism involved in symbiotic
interaction" evidence=IMP] [GO:0009405 "pathogenesis" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035690 "cellular
response to drug" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IEA] [GO:0000433 "negative regulation of
transcription from RNA polymerase II promoter by glucose"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0043156 "chromatin remodeling in
response to cation stress" evidence=IEA] [GO:0061418 "regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001198 "negative
regulation of mating-type specific transcription from RNA
polymerase II promoter" evidence=IEA] [GO:1900429 "negative
regulation of filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0097308
"cellular response to farnesol" evidence=IMP] [GO:0036171
"filamentous growth of a population of unicellular organisms in
response to chemical stimulus" evidence=IMP] [GO:0044114
"development of symbiont in host" evidence=IMP] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] [GO:0036033 "mediator complex binding" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0001191
"RNA polymerase II transcription factor binding transcription
factor activity involved in negative regulation of transcription"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 313 (115.2 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 76/219 (34%), Positives = 120/219 (54%)
Query: 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG--------------KFEKTISGHKLG 71
H+ V V+FS +G+++A+ +K +++ G K + T + L
Sbjct: 199 HSSVVCCVRFSRDGKFIATG-CNKTTQVFNVTTGELVAKLIDESSNENKDDNTTASGDLY 257
Query: 72 ISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 131
I V +S D +LL +G++DK ++IW+LS+ + +K L+GH ++ +F P + +VSGS
Sbjct: 258 IRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSG 317
Query: 132 DESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 191
D SVRIWD+RT +C TL D V+ V + DG LI + S D R+WD+ +G ++ L
Sbjct: 318 DRSVRIWDLRTSQCSLTLSIE-DGVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERL 376
Query: 192 IDDDNP-------PVSFVKFSPNGKYILAATLDNTLKLW 223
D N V V FS NG+ I + +LD T+KLW
Sbjct: 377 -DSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLW 414
Score = 274 (101.5 bits), Expect = 2.9e-23, P = 2.9e-23
Identities = 71/224 (31%), Positives = 111/224 (49%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
T A + SV FSP+G+ LA+ + DKLI+IW + K + GH+ I + + D
Sbjct: 250 TTASGDLYIRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDG 309
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
LVSGS D++++IW+L + +C TL V +P LI +GS D +VR+WD
Sbjct: 310 DRLVSGSGDRSVRIWDLRTSQCSLTLSIEDG-VTTVAVSPDGKLIAAGSLDRTVRVWDST 368
Query: 142 TGKCLKTLPA-------HSDPVSAVHFNRDGSLIVSSSYDGLCRIW-----DTASGQCLK 189
TG ++ L + H D V +V F+ +G I S S D ++W C
Sbjct: 369 TGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEV 428
Query: 190 TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAII 233
T I + +S V +P+ +YIL+ + D + WD P ++
Sbjct: 429 TYIGHKDFVLS-VCCTPDNEYILSGSKDRGVIFWDQASGNPLLM 471
Score = 234 (87.4 bits), Expect = 6.9e-19, P = 6.9e-19
Identities = 66/205 (32%), Positives = 102/205 (49%)
Query: 18 VLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW 77
++K L GH + + S+ F P+G+ L S S D+ ++IW + T+S G++ VA
Sbjct: 289 IIKI-LRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLSIED-GVTTVAV 346
Query: 78 SSDSRLLVSGSDDKTLKIWELSSGKCLKTL-------KGHSNYVFCCNFNPQSNLIVSGS 130
S D +L+ +GS D+T+++W+ ++G ++ L GH + V+ F+ I SGS
Sbjct: 347 SPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGS 406
Query: 131 FDESVRIWDVRTGK------CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 184
D +V++W + GK C T H D V +V D I+S S D WD AS
Sbjct: 407 LDRTVKLWHLE-GKSDKKSTCEVTYIGHKDFVLSVCCTPDNEYILSGSKDRGVIFWDQAS 465
Query: 185 GQCLKTLIDDDNPPVSFVKFSPNGK 209
G L L N +S V S N K
Sbjct: 466 GNPLLMLQGHRNSVIS-VAVSLNSK 489
Score = 203 (76.5 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 55/169 (32%), Positives = 87/169 (51%)
Query: 30 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-------SGHKLGISDVAWSSDSR 82
V++V SP+G+ +A+ S D+ +++W + G + + +GH+ + VA+S++
Sbjct: 341 VTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGE 400
Query: 83 LLVSGSDDKTLKIWELS--SGK---CLKTLKGHSNYVF--CCNFNPQSNLIVSGSFDESV 135
+ SGS D+T+K+W L S K C T GH ++V CC P + I+SGS D V
Sbjct: 401 QIASGSLDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCT--PDNEYILSGSKDRGV 458
Query: 136 RIWDVRTGKCLKTLPAHSDPVS--AVHFNRDGS--LIVSSSYDGLCRIW 180
WD +G L L H + V AV N G+ + + S D RIW
Sbjct: 459 IFWDQASGNPLLMLQGHRNSVISVAVSLNSKGTEGIFATGSGDCKARIW 507
Score = 180 (68.4 bits), Expect = 5.0e-13, P = 5.0e-13
Identities = 46/123 (37%), Positives = 63/123 (51%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIW---GAYDGKF--EKTISGHKLGISDVAWSS 79
GH +V SV FS NGE +AS S D+ +K+W G D K E T GHK + V +
Sbjct: 385 GHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCTP 444
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCC----NFNPQSNLIVSGSFDESV 135
D+ ++SGS D+ + W+ +SG L L+GH N V N + +GS D
Sbjct: 445 DNEYILSGSKDRGVIFWDQASGNPLLMLQGHRNSVISVAVSLNSKGTEGIFATGSGDCKA 504
Query: 136 RIW 138
RIW
Sbjct: 505 RIW 507
>UNIPROTKB|P0CY34 [details] [associations]
symbol:TUP1 "Transcriptional repressor TUP1" species:237561
"Candida albicans SC5314" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009372 "quorum sensing" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016337 "cell-cell adhesion"
evidence=IMP] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0035690 "cellular response to drug" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036171 "filamentous growth of a
population of unicellular organisms in response to chemical
stimulus" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0044114 "development of symbiont in host"
evidence=IMP] [GO:0044182 "filamentous growth of a population of
unicellular organisms" evidence=IMP] [GO:0044409 "entry into host"
evidence=IMP] [GO:0045827 "negative regulation of isoprenoid
metabolic process" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IGI;IMP] [GO:0051834
"evasion or tolerance of defenses of other organism involved in
symbiotic interaction" evidence=IMP] [GO:0071216 "cellular response
to biotic stimulus" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0097308 "cellular response to
farnesol" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 313 (115.2 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 76/219 (34%), Positives = 120/219 (54%)
Query: 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG--------------KFEKTISGHKLG 71
H+ V V+FS +G+++A+ +K +++ G K + T + L
Sbjct: 199 HSSVVCCVRFSRDGKFIATG-CNKTTQVFNVTTGELVAKLIDESSNENKDDNTTASGDLY 257
Query: 72 ISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 131
I V +S D +LL +G++DK ++IW+LS+ + +K L+GH ++ +F P + +VSGS
Sbjct: 258 IRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSG 317
Query: 132 DESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 191
D SVRIWD+RT +C TL D V+ V + DG LI + S D R+WD+ +G ++ L
Sbjct: 318 DRSVRIWDLRTSQCSLTLSIE-DGVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERL 376
Query: 192 IDDDNP-------PVSFVKFSPNGKYILAATLDNTLKLW 223
D N V V FS NG+ I + +LD T+KLW
Sbjct: 377 -DSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLW 414
Score = 274 (101.5 bits), Expect = 2.9e-23, P = 2.9e-23
Identities = 71/224 (31%), Positives = 111/224 (49%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
T A + SV FSP+G+ LA+ + DKLI+IW + K + GH+ I + + D
Sbjct: 250 TTASGDLYIRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDG 309
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
LVSGS D++++IW+L + +C TL V +P LI +GS D +VR+WD
Sbjct: 310 DRLVSGSGDRSVRIWDLRTSQCSLTLSIEDG-VTTVAVSPDGKLIAAGSLDRTVRVWDST 368
Query: 142 TGKCLKTLPA-------HSDPVSAVHFNRDGSLIVSSSYDGLCRIW-----DTASGQCLK 189
TG ++ L + H D V +V F+ +G I S S D ++W C
Sbjct: 369 TGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEV 428
Query: 190 TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAII 233
T I + +S V +P+ +YIL+ + D + WD P ++
Sbjct: 429 TYIGHKDFVLS-VCCTPDNEYILSGSKDRGVIFWDQASGNPLLM 471
Score = 234 (87.4 bits), Expect = 6.9e-19, P = 6.9e-19
Identities = 66/205 (32%), Positives = 102/205 (49%)
Query: 18 VLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW 77
++K L GH + + S+ F P+G+ L S S D+ ++IW + T+S G++ VA
Sbjct: 289 IIKI-LRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLSIED-GVTTVAV 346
Query: 78 SSDSRLLVSGSDDKTLKIWELSSGKCLKTL-------KGHSNYVFCCNFNPQSNLIVSGS 130
S D +L+ +GS D+T+++W+ ++G ++ L GH + V+ F+ I SGS
Sbjct: 347 SPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGS 406
Query: 131 FDESVRIWDVRTGK------CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 184
D +V++W + GK C T H D V +V D I+S S D WD AS
Sbjct: 407 LDRTVKLWHLE-GKSDKKSTCEVTYIGHKDFVLSVCCTPDNEYILSGSKDRGVIFWDQAS 465
Query: 185 GQCLKTLIDDDNPPVSFVKFSPNGK 209
G L L N +S V S N K
Sbjct: 466 GNPLLMLQGHRNSVIS-VAVSLNSK 489
Score = 203 (76.5 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 55/169 (32%), Positives = 87/169 (51%)
Query: 30 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-------SGHKLGISDVAWSSDSR 82
V++V SP+G+ +A+ S D+ +++W + G + + +GH+ + VA+S++
Sbjct: 341 VTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGE 400
Query: 83 LLVSGSDDKTLKIWELS--SGK---CLKTLKGHSNYVF--CCNFNPQSNLIVSGSFDESV 135
+ SGS D+T+K+W L S K C T GH ++V CC P + I+SGS D V
Sbjct: 401 QIASGSLDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCT--PDNEYILSGSKDRGV 458
Query: 136 RIWDVRTGKCLKTLPAHSDPVS--AVHFNRDGS--LIVSSSYDGLCRIW 180
WD +G L L H + V AV N G+ + + S D RIW
Sbjct: 459 IFWDQASGNPLLMLQGHRNSVISVAVSLNSKGTEGIFATGSGDCKARIW 507
Score = 180 (68.4 bits), Expect = 5.0e-13, P = 5.0e-13
Identities = 46/123 (37%), Positives = 63/123 (51%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIW---GAYDGKF--EKTISGHKLGISDVAWSS 79
GH +V SV FS NGE +AS S D+ +K+W G D K E T GHK + V +
Sbjct: 385 GHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCTP 444
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCC----NFNPQSNLIVSGSFDESV 135
D+ ++SGS D+ + W+ +SG L L+GH N V N + +GS D
Sbjct: 445 DNEYILSGSKDRGVIFWDQASGNPLLMLQGHRNSVISVAVSLNSKGTEGIFATGSGDCKA 504
Query: 136 RIW 138
RIW
Sbjct: 505 RIW 507
>GENEDB_PFALCIPARUM|PF08_0019 [details] [associations]
symbol:PF08_0019 "receptor for activated C
kinase homolog, PfRACK" species:5833 "Plasmodium falciparum"
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] [GO:0005080 "protein kinase C binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 68/218 (31%), Positives = 124/218 (56%)
Query: 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 79
K +L GH++A++ V S +G + S S D +++W G+ ++ GH + V++S
Sbjct: 65 KKSLTGHSQAINDVSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSP 124
Query: 80 DSRLLVSGSDDKTLKIWE-LSSGKCLKTLKGHSNYVFCCNFNPQSN--LIVSGSFDESVR 136
D+R +VS S DKT+K+W L+ K T + H++++ C F+P N +IVS +D+ V+
Sbjct: 125 DNRQIVSASRDKTIKLWNTLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVK 184
Query: 137 IWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 196
+W+++ K L H+ ++ V + DGSL S DG+ ++WD G+ L +L +
Sbjct: 185 VWNLKNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSL--ETG 242
Query: 197 PPVSFVKFSPNGKYILAATLDNTLKLW--DSKVVTPAI 232
++ + FSP ++ AAT D +++W +SK++ I
Sbjct: 243 STINSLCFSPCDYWLCAAT-DRFIRIWNLESKLIISEI 279
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 65/215 (30%), Positives = 118/215 (54%)
Query: 25 GHTKAVSSVKF--SPNGEWLASSSADKLIKIWGAYD-------GKFEKTISGHKLGISDV 75
GH+ V+SV P + + S+S DK + +W G +K+++GH I+DV
Sbjct: 19 GHSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDV 78
Query: 76 AWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 135
+ SSD +SGS D ++++W+LS G+ +++ GH++ VF +F+P + IVS S D+++
Sbjct: 79 SISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKTI 138
Query: 136 RIWDVRTGKCLKTLP--AHSDPVSAVHFNR--DGSLIVSSSYDGLCRIWDTASGQCLKTL 191
++W+ +C T+ H+D ++ V F+ + ++IVS +D L ++W+ + K L
Sbjct: 139 KLWNT-LAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNKNL 197
Query: 192 IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSK 226
+ ++ V SP+G + D KLWD K
Sbjct: 198 -EGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVK 231
>UNIPROTKB|Q8IBA0 [details] [associations]
symbol:PfRACK "Receptor for activated C kinase homolog,
PfRACK" species:36329 "Plasmodium falciparum 3D7" [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 68/218 (31%), Positives = 124/218 (56%)
Query: 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 79
K +L GH++A++ V S +G + S S D +++W G+ ++ GH + V++S
Sbjct: 65 KKSLTGHSQAINDVSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSP 124
Query: 80 DSRLLVSGSDDKTLKIWE-LSSGKCLKTLKGHSNYVFCCNFNPQSN--LIVSGSFDESVR 136
D+R +VS S DKT+K+W L+ K T + H++++ C F+P N +IVS +D+ V+
Sbjct: 125 DNRQIVSASRDKTIKLWNTLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVK 184
Query: 137 IWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 196
+W+++ K L H+ ++ V + DGSL S DG+ ++WD G+ L +L +
Sbjct: 185 VWNLKNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSL--ETG 242
Query: 197 PPVSFVKFSPNGKYILAATLDNTLKLW--DSKVVTPAI 232
++ + FSP ++ AAT D +++W +SK++ I
Sbjct: 243 STINSLCFSPCDYWLCAAT-DRFIRIWNLESKLIISEI 279
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 65/215 (30%), Positives = 118/215 (54%)
Query: 25 GHTKAVSSVKF--SPNGEWLASSSADKLIKIWGAYD-------GKFEKTISGHKLGISDV 75
GH+ V+SV P + + S+S DK + +W G +K+++GH I+DV
Sbjct: 19 GHSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDV 78
Query: 76 AWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 135
+ SSD +SGS D ++++W+LS G+ +++ GH++ VF +F+P + IVS S D+++
Sbjct: 79 SISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKTI 138
Query: 136 RIWDVRTGKCLKTLP--AHSDPVSAVHFNR--DGSLIVSSSYDGLCRIWDTASGQCLKTL 191
++W+ +C T+ H+D ++ V F+ + ++IVS +D L ++W+ + K L
Sbjct: 139 KLWNT-LAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNKNL 197
Query: 192 IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSK 226
+ ++ V SP+G + D KLWD K
Sbjct: 198 -EGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVK 231
>WB|WBGene00007972 [details] [associations]
symbol:prp-4 species:6239 "Caenorhabditis elegans"
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] [GO:0001703
"gastrulation with mouth forming first" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0008406 "gonad development" evidence=IMP]
[GO:0016477 "cell migration" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:Z80215
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0016477
GO:GO:0008406 GO:GO:0002119 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0040020 InterPro:IPR027106 PANTHER:PTHR19846
GO:GO:0001703 InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR PIR:T19776
RefSeq:NP_492363.1 HSSP:O43172 ProteinModelPortal:Q93339 SMR:Q93339
DIP:DIP-26822N IntAct:Q93339 MINT:MINT-1102466 STRING:Q93339
PaxDb:Q93339 EnsemblMetazoa:C36B1.5.1 EnsemblMetazoa:C36B1.5.2
GeneID:183250 KEGG:cel:CELE_C36B1.5 UCSC:C36B1.5.1 CTD:183250
WormBase:C36B1.5 InParanoid:Q93339 NextBio:920460 Uniprot:Q93339
Length = 496
Score = 311 (114.5 bits), Expect = 1.8e-27, P = 1.8e-27
Identities = 64/204 (31%), Positives = 110/204 (53%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI---SGHKLGISDVAWSS 79
L H + VS V F PNG LA++ D W YD +K + GH ++DVA+
Sbjct: 292 LEQHPQRVSKVAFHPNGHHLATACFDST---WRMYDLTTKKELLYQEGHSKSVADVAFHP 348
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
D + ++G D ++W++ +G+C+ L GH+ + + P +++GS D S+++WD
Sbjct: 349 DGSVALTGGHDCYGRVWDMRTGRCIMFLDGHTKEIHSVEWMPNGYEMITGSSDNSMKVWD 408
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
+R + T+PAH+ V+ V + G +VS+S+D ++W T Q L+ L D +
Sbjct: 409 LRMRRNTYTMPAHTSVVTRVRADAAGQYLVSASFDCTLKMWSTTGWQPLRQLQGHDTR-I 467
Query: 200 SFVKFSPNGKYILAATLDNTLKLW 223
V SP+G+++ ++ D T KLW
Sbjct: 468 LCVDISPDGQWMCSSAFDRTFKLW 491
Score = 218 (81.8 bits), Expect = 3.5e-17, P = 3.5e-17
Identities = 58/209 (27%), Positives = 106/209 (50%)
Query: 27 TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH--KLGISDV---AWSSD- 80
T+ V+ +FS + E + ++ + +W E GH + G + A++ +
Sbjct: 204 TRPVAFCEFSADSEHIVTAGWSGSVAVWKREQCAQEIKFIGHSSQAGCARFHPGAFTQND 263
Query: 81 -SRL-LVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
S L +VS S D T+ +W LS + L+ H V F+P + + + FD + R++
Sbjct: 264 YSSLNVVSCSYDGTVLLWSLSQESPIGELEQHPQRVSKVAFHPNGHHLATACFDSTWRMY 323
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 198
D+ T K L HS V+ V F+ DGS+ ++ +D R+WD +G+C+ L D
Sbjct: 324 DLTTKKELLYQEGHSKSVADVAFHPDGSVALTGGHDCYGRVWDMRTGRCIMFL-DGHTKE 382
Query: 199 VSFVKFSPNGKYILAATLDNTLKLWDSKV 227
+ V++ PNG ++ + DN++K+WD ++
Sbjct: 383 IHSVEWMPNGYEMITGSSDNSMKVWDLRM 411
Score = 214 (80.4 bits), Expect = 9.5e-17, P = 9.5e-17
Identities = 54/215 (25%), Positives = 104/215 (48%)
Query: 19 LKFTLAGHTKAVSSVKFSPNG----EW----LASSSADKLIKIWGAYDGKFEKTISGHKL 70
+KF GH+ +F P ++ + S S D + +W + H
Sbjct: 240 IKFI--GHSSQAGCARFHPGAFTQNDYSSLNVVSCSYDGTVLLWSLSQESPIGELEQHPQ 297
Query: 71 GISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 130
+S VA+ + L + D T ++++L++ K L +GHS V F+P ++ ++G
Sbjct: 298 RVSKVAFHPNGHHLATACFDSTWRMYDLTTKKELLYQEGHSKSVADVAFHPDGSVALTGG 357
Query: 131 FDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 190
D R+WD+RTG+C+ L H+ + +V + +G +++ S D ++WD + T
Sbjct: 358 HDCYGRVWDMRTGRCIMFLDGHTKEIHSVEWMPNGYEMITGSSDNSMKVWDLRMRRNTYT 417
Query: 191 LIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225
+ V+ V+ G+Y+++A+ D TLK+W +
Sbjct: 418 M-PAHTSVVTRVRADAAGQYLVSASFDCTLKMWST 451
Score = 112 (44.5 bits), Expect = 0.00084, P = 0.00084
Identities = 24/79 (30%), Positives = 41/79 (51%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 80
+T+ HT V+ V+ G++L S+S D +K+W + + + GH I V S D
Sbjct: 416 YTMPAHTSVVTRVRADAAGQYLVSASFDCTLKMWSTTGWQPLRQLQGHDTRILCVDISPD 475
Query: 81 SRLLVSGSDDKTLKIWELS 99
+ + S + D+T K+W S
Sbjct: 476 GQWMCSSAFDRTFKLWAQS 494
>UNIPROTKB|B4DIE6 [details] [associations]
symbol:WSB2 "cDNA FLJ59692, highly similar to WD repeat and
SOCS box-containing protein 2" species:9606 "Homo sapiens"
[GO:0035556 "intracellular signal transduction" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
EMBL:AC131159 HOGENOM:HOG000063727 HOVERGEN:HBG034543 OMA:HHPQVPD
UniGene:Hs.506985 HGNC:HGNC:19222 EMBL:AC131238 EMBL:AK295555
IPI:IPI00032828 SMR:B4DIE6 STRING:B4DIE6 Ensembl:ENST00000441406
Uniprot:B4DIE6
Length = 421
Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 67/202 (33%), Positives = 117/202 (57%)
Query: 42 LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS-SDSRLLVSGSDDKTLKIWELSS 100
LA+ D IKIW G +SGH+ + D++++ S S +LVS S DKTL+IW+L+
Sbjct: 143 LATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNK 202
Query: 101 -GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAV 159
GK ++ L GH +V+CC+ +P +++ S + ++SV +W +R+ ++ L H V +
Sbjct: 203 HGKQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSC 262
Query: 160 HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL--------IDDDNPPVSFVK---FSPNG 208
F+ D +L+V++SYD +WD +G+ L++L +DD + +S ++ FSP G
Sbjct: 263 DFSPDSALLVTASYDTNVIMWDPYTGERLRSLHHTQVDPAMDDSDVHISSLRSVCFSPEG 322
Query: 209 KYILAATLDNTLKLWDSKVVTP 230
Y+ D L++W ++ TP
Sbjct: 323 LYLATVADDRLLRIWALELKTP 344
Score = 247 (92.0 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 72/239 (30%), Positives = 121/239 (50%)
Query: 18 VLKFTLAGHTKAVSSVKFSPNGEW-LASSSADKLIKIWGAYD-GKFEKTISGHKLGISDV 75
+L L+GH V + F+P+G L S+S DK ++IW GK + +SGH +
Sbjct: 161 LLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQWVYCC 220
Query: 76 AWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 135
+ S D +L S + +K++ +W + S ++ L+GH + V C+F+P S L+V+ S+D +V
Sbjct: 221 SISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPDSALLVTASYDTNV 280
Query: 136 RIWDVRTGKCLKTL------PA------HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA 183
+WD TG+ L++L PA H + +V F+ +G + + + D L RIW
Sbjct: 281 IMWDPYTGERLRSLHHTQVDPAMDDSDVHISSLRSVCFSPEGLYLATVADDRLLRIWALE 340
Query: 184 SGQCLKTLIDDDNPPVSFV--KFSPNGKYILAATLDNTLKLWDSKVVTPAI--ICSTPL 238
LKT I P + + F P+G I T D ++ W + V ++ +C L
Sbjct: 341 ----LKTPIAFA-PMTNGLCCTFFPHGGVIATGTRDGHVQFWTAPRVLSSLKHLCRKAL 394
Score = 151 (58.2 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 59/208 (28%), Positives = 90/208 (43%)
Query: 32 SVKFSPNGEWLASSSADKLIKI--WGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSD 89
SV FSP+G W A S ++K+ W + K G + SS + GS
Sbjct: 48 SVAFSPDGSWFAWSQGHCIVKLIPWPLEEQFIPK-------GFEAKSRSSKNETKGRGSP 100
Query: 90 -DKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQ----SNLIVS-GSFDESVRIWDVRTG 143
+KTL ++ G + +PQ S L+++ G D ++IW+V+TG
Sbjct: 101 KEKTLDCGQIVWGLAFSPWPSPPSRKLWARHHPQVPDVSCLVLATGLNDGQIKIWEVQTG 160
Query: 144 KCLKTLPAHSDPVSAVHFNRDGSLI-VSSSYDGLCRIWD-TASGQCLKTLIDDDNPPVSF 201
L L H D V + F GSLI VS+S D RIWD G+ ++ L V
Sbjct: 161 LLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVL-SGHLQWVYC 219
Query: 202 VKFSPNGKYILAATLDNTLKLWDSKVVT 229
SP+ + +A + ++ LW + T
Sbjct: 220 CSISPDCSMLCSAAGEKSVFLWSMRSYT 247
Score = 126 (49.4 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 42/148 (28%), Positives = 64/148 (43%)
Query: 17 YVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG--------- 67
Y L L GH +V S FSP+ L ++S D + +W Y G+ +++
Sbjct: 246 YTLIRKLEGHQSSVVSCDFSPDSALLVTASYDTNVIMWDPYTGERLRSLHHTQVDPAMDD 305
Query: 68 ---HKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYV--FCCNFNPQ 122
H + V +S + L + +DD+ L+IW L LKT + CC F P
Sbjct: 306 SDVHISSLRSVCFSPEGLYLATVADDRLLRIWALE----LKTPIAFAPMTNGLCCTFFPH 361
Query: 123 SNLIVSGSFDESVRIWDV-RTGKCLKTL 149
+I +G+ D V+ W R LK L
Sbjct: 362 GGVIATGTRDGHVQFWTAPRVLSSLKHL 389
>UNIPROTKB|F5H280 [details] [associations]
symbol:WSB2 "WD repeat and SOCS box-containing protein 2"
species:9606 "Homo sapiens" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
EMBL:AC131159 HGNC:HGNC:19222 EMBL:AC131238 IPI:IPI01011081
ProteinModelPortal:F5H280 SMR:F5H280 Ensembl:ENST00000535496
ArrayExpress:F5H280 Bgee:F5H280 Uniprot:F5H280
Length = 406
Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 67/202 (33%), Positives = 117/202 (57%)
Query: 42 LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS-SDSRLLVSGSDDKTLKIWELSS 100
LA+ D IKIW G +SGH+ + D++++ S S +LVS S DKTL+IW+L+
Sbjct: 128 LATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNK 187
Query: 101 -GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAV 159
GK ++ L GH +V+CC+ +P +++ S + ++SV +W +R+ ++ L H V +
Sbjct: 188 HGKQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSC 247
Query: 160 HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL--------IDDDNPPVSFVK---FSPNG 208
F+ D +L+V++SYD +WD +G+ L++L +DD + +S ++ FSP G
Sbjct: 248 DFSPDSALLVTASYDTNVIMWDPYTGERLRSLHHTQVDPAMDDSDVHISSLRSVCFSPEG 307
Query: 209 KYILAATLDNTLKLWDSKVVTP 230
Y+ D L++W ++ TP
Sbjct: 308 LYLATVADDRLLRIWALELKTP 329
Score = 247 (92.0 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 72/239 (30%), Positives = 121/239 (50%)
Query: 18 VLKFTLAGHTKAVSSVKFSPNGEW-LASSSADKLIKIWGAYD-GKFEKTISGHKLGISDV 75
+L L+GH V + F+P+G L S+S DK ++IW GK + +SGH +
Sbjct: 146 LLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQWVYCC 205
Query: 76 AWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 135
+ S D +L S + +K++ +W + S ++ L+GH + V C+F+P S L+V+ S+D +V
Sbjct: 206 SISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPDSALLVTASYDTNV 265
Query: 136 RIWDVRTGKCLKTL------PA------HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA 183
+WD TG+ L++L PA H + +V F+ +G + + + D L RIW
Sbjct: 266 IMWDPYTGERLRSLHHTQVDPAMDDSDVHISSLRSVCFSPEGLYLATVADDRLLRIWALE 325
Query: 184 SGQCLKTLIDDDNPPVSFV--KFSPNGKYILAATLDNTLKLWDSKVVTPAI--ICSTPL 238
LKT I P + + F P+G I T D ++ W + V ++ +C L
Sbjct: 326 ----LKTPIAFA-PMTNGLCCTFFPHGGVIATGTRDGHVQFWTAPRVLSSLKHLCRKAL 379
Score = 151 (58.2 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 59/208 (28%), Positives = 90/208 (43%)
Query: 32 SVKFSPNGEWLASSSADKLIKI--WGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSD 89
SV FSP+G W A S ++K+ W + K G + SS + GS
Sbjct: 33 SVAFSPDGSWFAWSQGHCIVKLIPWPLEEQFIPK-------GFEAKSRSSKNETKGRGSP 85
Query: 90 -DKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQ----SNLIVS-GSFDESVRIWDVRTG 143
+KTL ++ G + +PQ S L+++ G D ++IW+V+TG
Sbjct: 86 KEKTLDCGQIVWGLAFSPWPSPPSRKLWARHHPQVPDVSCLVLATGLNDGQIKIWEVQTG 145
Query: 144 KCLKTLPAHSDPVSAVHFNRDGSLI-VSSSYDGLCRIWD-TASGQCLKTLIDDDNPPVSF 201
L L H D V + F GSLI VS+S D RIWD G+ ++ L V
Sbjct: 146 LLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVL-SGHLQWVYC 204
Query: 202 VKFSPNGKYILAATLDNTLKLWDSKVVT 229
SP+ + +A + ++ LW + T
Sbjct: 205 CSISPDCSMLCSAAGEKSVFLWSMRSYT 232
Score = 126 (49.4 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 42/148 (28%), Positives = 64/148 (43%)
Query: 17 YVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG--------- 67
Y L L GH +V S FSP+ L ++S D + +W Y G+ +++
Sbjct: 231 YTLIRKLEGHQSSVVSCDFSPDSALLVTASYDTNVIMWDPYTGERLRSLHHTQVDPAMDD 290
Query: 68 ---HKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYV--FCCNFNPQ 122
H + V +S + L + +DD+ L+IW L LKT + CC F P
Sbjct: 291 SDVHISSLRSVCFSPEGLYLATVADDRLLRIWALE----LKTPIAFAPMTNGLCCTFFPH 346
Query: 123 SNLIVSGSFDESVRIWDV-RTGKCLKTL 149
+I +G+ D V+ W R LK L
Sbjct: 347 GGVIATGTRDGHVQFWTAPRVLSSLKHL 374
>UNIPROTKB|Q9NYS7 [details] [associations]
symbol:WSB2 "WD repeat and SOCS box-containing protein 2"
species:9606 "Homo sapiens" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567
GO:GO:0005622 HOGENOM:HOG000063727 HOVERGEN:HBG034543 CTD:55884
KO:K10342 EMBL:AF229181 EMBL:AF163324 EMBL:BC015887 IPI:IPI00941604
RefSeq:NP_061109.1 UniGene:Hs.506985 ProteinModelPortal:Q9NYS7
SMR:Q9NYS7 IntAct:Q9NYS7 MINT:MINT-1379403 STRING:Q9NYS7
PhosphoSite:Q9NYS7 DMDM:20532294 PRIDE:Q9NYS7 DNASU:55884
Ensembl:ENST00000315436 GeneID:55884 KEGG:hsa:55884 UCSC:uc001twr.2
GeneCards:GC12M118470 HGNC:HGNC:19222 neXtProt:NX_Q9NYS7
PharmGKB:PA128395787 InParanoid:Q9NYS7 PhylomeDB:Q9NYS7
GenomeRNAi:55884 NextBio:61208 ArrayExpress:Q9NYS7 Bgee:Q9NYS7
CleanEx:HS_WSB2 Genevestigator:Q9NYS7 GermOnline:ENSG00000176871
Uniprot:Q9NYS7
Length = 404
Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 67/202 (33%), Positives = 117/202 (57%)
Query: 42 LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS-SDSRLLVSGSDDKTLKIWELSS 100
LA+ D IKIW G +SGH+ + D++++ S S +LVS S DKTL+IW+L+
Sbjct: 126 LATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNK 185
Query: 101 -GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAV 159
GK ++ L GH +V+CC+ +P +++ S + ++SV +W +R+ ++ L H V +
Sbjct: 186 HGKQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSC 245
Query: 160 HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL--------IDDDNPPVSFVK---FSPNG 208
F+ D +L+V++SYD +WD +G+ L++L +DD + +S ++ FSP G
Sbjct: 246 DFSPDSALLVTASYDTNVIMWDPYTGERLRSLHHTQVDPAMDDSDVHISSLRSVCFSPEG 305
Query: 209 KYILAATLDNTLKLWDSKVVTP 230
Y+ D L++W ++ TP
Sbjct: 306 LYLATVADDRLLRIWALELKTP 327
Score = 247 (92.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 72/239 (30%), Positives = 121/239 (50%)
Query: 18 VLKFTLAGHTKAVSSVKFSPNGEW-LASSSADKLIKIWGAYD-GKFEKTISGHKLGISDV 75
+L L+GH V + F+P+G L S+S DK ++IW GK + +SGH +
Sbjct: 144 LLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQWVYCC 203
Query: 76 AWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 135
+ S D +L S + +K++ +W + S ++ L+GH + V C+F+P S L+V+ S+D +V
Sbjct: 204 SISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPDSALLVTASYDTNV 263
Query: 136 RIWDVRTGKCLKTL------PA------HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA 183
+WD TG+ L++L PA H + +V F+ +G + + + D L RIW
Sbjct: 264 IMWDPYTGERLRSLHHTQVDPAMDDSDVHISSLRSVCFSPEGLYLATVADDRLLRIWALE 323
Query: 184 SGQCLKTLIDDDNPPVSFV--KFSPNGKYILAATLDNTLKLWDSKVVTPAI--ICSTPL 238
LKT I P + + F P+G I T D ++ W + V ++ +C L
Sbjct: 324 ----LKTPIAFA-PMTNGLCCTFFPHGGVIATGTRDGHVQFWTAPRVLSSLKHLCRKAL 377
Score = 151 (58.2 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 59/208 (28%), Positives = 90/208 (43%)
Query: 32 SVKFSPNGEWLASSSADKLIKI--WGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSD 89
SV FSP+G W A S ++K+ W + K G + SS + GS
Sbjct: 31 SVAFSPDGSWFAWSQGHCIVKLIPWPLEEQFIPK-------GFEAKSRSSKNETKGRGSP 83
Query: 90 -DKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQ----SNLIVS-GSFDESVRIWDVRTG 143
+KTL ++ G + +PQ S L+++ G D ++IW+V+TG
Sbjct: 84 KEKTLDCGQIVWGLAFSPWPSPPSRKLWARHHPQVPDVSCLVLATGLNDGQIKIWEVQTG 143
Query: 144 KCLKTLPAHSDPVSAVHFNRDGSLI-VSSSYDGLCRIWD-TASGQCLKTLIDDDNPPVSF 201
L L H D V + F GSLI VS+S D RIWD G+ ++ L V
Sbjct: 144 LLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVL-SGHLQWVYC 202
Query: 202 VKFSPNGKYILAATLDNTLKLWDSKVVT 229
SP+ + +A + ++ LW + T
Sbjct: 203 CSISPDCSMLCSAAGEKSVFLWSMRSYT 230
Score = 126 (49.4 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 42/148 (28%), Positives = 64/148 (43%)
Query: 17 YVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG--------- 67
Y L L GH +V S FSP+ L ++S D + +W Y G+ +++
Sbjct: 229 YTLIRKLEGHQSSVVSCDFSPDSALLVTASYDTNVIMWDPYTGERLRSLHHTQVDPAMDD 288
Query: 68 ---HKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYV--FCCNFNPQ 122
H + V +S + L + +DD+ L+IW L LKT + CC F P
Sbjct: 289 SDVHISSLRSVCFSPEGLYLATVADDRLLRIWALE----LKTPIAFAPMTNGLCCTFFPH 344
Query: 123 SNLIVSGSFDESVRIWDV-RTGKCLKTL 149
+I +G+ D V+ W R LK L
Sbjct: 345 GGVIATGTRDGHVQFWTAPRVLSSLKHL 372
>UNIPROTKB|Q0V8J1 [details] [associations]
symbol:WSB2 "WD repeat and SOCS box-containing protein 2"
species:9913 "Bos taurus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567
GO:GO:0005622 GeneTree:ENSGT00700000104017 HOGENOM:HOG000063727
HOVERGEN:HBG034543 EMBL:BT026227 IPI:IPI00708559
RefSeq:NP_001068825.1 UniGene:Bt.109198 ProteinModelPortal:Q0V8J1
Ensembl:ENSBTAT00000009395 GeneID:508388 KEGG:bta:508388 CTD:55884
InParanoid:Q0V8J1 KO:K10342 OMA:HHPQVPD OrthoDB:EOG45DWPC
NextBio:20868498 Uniprot:Q0V8J1
Length = 406
Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 67/202 (33%), Positives = 117/202 (57%)
Query: 42 LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS-SDSRLLVSGSDDKTLKIWELSS 100
LA+ D IKIW G +SGH+ + D++++ S S +LVS S DKTL+IW+L+
Sbjct: 128 LATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNK 187
Query: 101 -GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAV 159
GK ++ L GH +V+CC+ +P +++ S + ++SV +W +R+ ++ L H V +
Sbjct: 188 HGKQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSC 247
Query: 160 HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL--------IDDDNPPVSFVK---FSPNG 208
F+ D +L+V++SYD +WD +G+ L++L +DD + +S ++ FSP G
Sbjct: 248 DFSPDSALLVTASYDTNVIMWDPYTGERLRSLHHTQLNPPMDDSDVHISSLRSVCFSPEG 307
Query: 209 KYILAATLDNTLKLWDSKVVTP 230
Y+ D L++W ++ TP
Sbjct: 308 LYLATVADDRLLRIWALELKTP 329
Score = 243 (90.6 bits), Expect = 3.0e-20, P = 3.0e-20
Identities = 71/239 (29%), Positives = 120/239 (50%)
Query: 18 VLKFTLAGHTKAVSSVKFSPNGEW-LASSSADKLIKIWGAYD-GKFEKTISGHKLGISDV 75
+L L+GH V + F+P+G L S+S DK ++IW GK + +SGH +
Sbjct: 146 LLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQWVYCC 205
Query: 76 AWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 135
+ S D +L S + +K++ +W + S ++ L+GH + V C+F+P S L+V+ S+D +V
Sbjct: 206 SISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPDSALLVTASYDTNV 265
Query: 136 RIWDVRTGKCLKTL-------P-----AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA 183
+WD TG+ L++L P H + +V F+ +G + + + D L RIW
Sbjct: 266 IMWDPYTGERLRSLHHTQLNPPMDDSDVHISSLRSVCFSPEGLYLATVADDRLLRIWALE 325
Query: 184 SGQCLKTLIDDDNPPVSFV--KFSPNGKYILAATLDNTLKLWDSKVVTPAI--ICSTPL 238
LKT I P + + F P+G I T D ++ W + V ++ +C L
Sbjct: 326 ----LKTPIAFA-PMTNGLCCTFFPHGGVIATGTRDGHVQFWTAPRVLSSLKHLCRKAL 379
Score = 152 (58.6 bits), Expect = 9.3e-09, P = 9.3e-09
Identities = 60/208 (28%), Positives = 90/208 (43%)
Query: 32 SVKFSPNGEWLASSSADKLIKI--WGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSD 89
SV FSP+G W A S ++K+ W + K G + SS + GS
Sbjct: 33 SVAFSPDGSWFAWSQGHCIVKLIPWPLEEQFIPK-------GFEAKSRSSKNETKGRGSP 85
Query: 90 -DKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQ----SNLIVS-GSFDESVRIWDVRTG 143
+KTL ++ G + +PQ S LI++ G D ++IW+V+TG
Sbjct: 86 KEKTLDCGQIVWGLAFSPWPSPPSKKLWARHHPQVPDVSCLILATGLNDGQIKIWEVQTG 145
Query: 144 KCLKTLPAHSDPVSAVHFNRDGSLI-VSSSYDGLCRIWD-TASGQCLKTLIDDDNPPVSF 201
L L H D V + F GSLI VS+S D RIWD G+ ++ L V
Sbjct: 146 LLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVL-SGHLQWVYC 204
Query: 202 VKFSPNGKYILAATLDNTLKLWDSKVVT 229
SP+ + +A + ++ LW + T
Sbjct: 205 CSISPDCSMLCSAAGEKSVFLWSMRSYT 232
Score = 126 (49.4 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 44/148 (29%), Positives = 66/148 (44%)
Query: 17 YVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG----- 71
Y L L GH +V S FSP+ L ++S D + +W Y G+ +++ +L
Sbjct: 231 YTLIRKLEGHQSSVVSCDFSPDSALLVTASYDTNVIMWDPYTGERLRSLHHTQLNPPMDD 290
Query: 72 ----ISD---VAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYV--FCCNFNPQ 122
IS V +S + L + +DD+ L+IW L LKT + CC F P
Sbjct: 291 SDVHISSLRSVCFSPEGLYLATVADDRLLRIWALE----LKTPIAFAPMTNGLCCTFFPH 346
Query: 123 SNLIVSGSFDESVRIWDV-RTGKCLKTL 149
+I +G+ D V+ W R LK L
Sbjct: 347 GGVIATGTRDGHVQFWTAPRVLSSLKHL 374
>UNIPROTKB|F1RKG5 [details] [associations]
symbol:WSB2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0035556 "intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 OMA:HHPQVPD EMBL:CU468330
Ensembl:ENSSSCT00000010800 Uniprot:F1RKG5
Length = 404
Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 67/202 (33%), Positives = 117/202 (57%)
Query: 42 LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS-SDSRLLVSGSDDKTLKIWELSS 100
LA+ D IKIW G +SGH+ + D++++ S S +LVS S DKTL+IW+L+
Sbjct: 126 LATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNK 185
Query: 101 -GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAV 159
GK ++ L GH +V+CC+ +P +++ S + ++SV +W +R+ ++ L H V +
Sbjct: 186 HGKQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSC 245
Query: 160 HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL--------IDDDNPPVSFVK---FSPNG 208
F+ D +L+V++SYD +WD +G+ L++L +DD + +S ++ FSP G
Sbjct: 246 DFSPDSALLVTASYDTNVIMWDPYTGERLRSLHHTQLSPPMDDSDVHISSLRSVCFSPEG 305
Query: 209 KYILAATLDNTLKLWDSKVVTP 230
Y+ D L++W ++ TP
Sbjct: 306 LYLATVADDRLLRIWALELKTP 327
Score = 243 (90.6 bits), Expect = 2.9e-20, P = 2.9e-20
Identities = 71/239 (29%), Positives = 120/239 (50%)
Query: 18 VLKFTLAGHTKAVSSVKFSPNGEW-LASSSADKLIKIWGAYD-GKFEKTISGHKLGISDV 75
+L L+GH V + F+P+G L S+S DK ++IW GK + +SGH +
Sbjct: 144 LLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQWVYCC 203
Query: 76 AWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 135
+ S D +L S + +K++ +W + S ++ L+GH + V C+F+P S L+V+ S+D +V
Sbjct: 204 SISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPDSALLVTASYDTNV 263
Query: 136 RIWDVRTGKCLKTL-------P-----AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA 183
+WD TG+ L++L P H + +V F+ +G + + + D L RIW
Sbjct: 264 IMWDPYTGERLRSLHHTQLSPPMDDSDVHISSLRSVCFSPEGLYLATVADDRLLRIWALE 323
Query: 184 SGQCLKTLIDDDNPPVSFV--KFSPNGKYILAATLDNTLKLWDSKVVTPAI--ICSTPL 238
LKT I P + + F P+G I T D ++ W + V ++ +C L
Sbjct: 324 ----LKTPIAFA-PMTNGLCCTFFPHGGVIATGTRDGHVQFWTAPRVLSSLKHLCRKAL 377
Score = 150 (57.9 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 60/208 (28%), Positives = 90/208 (43%)
Query: 32 SVKFSPNGEWLASSSADKLIKI--WGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSD 89
SV FSP+G W A S ++K+ W + K G + SS + GS
Sbjct: 31 SVAFSPDGSWFAWSQGHCIVKLIPWPLEEQFIPK-------GFEAKSRSSKNDTKGRGSP 83
Query: 90 -DKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQ----SNLIVS-GSFDESVRIWDVRTG 143
+KTL ++ G + +PQ S LI++ G D ++IW+V+TG
Sbjct: 84 KEKTLDCGQIVWGLAFSPWPSPPSRKLWARHHPQVPDVSCLILATGLNDGQIKIWEVQTG 143
Query: 144 KCLKTLPAHSDPVSAVHFNRDGSLI-VSSSYDGLCRIWD-TASGQCLKTLIDDDNPPVSF 201
L L H D V + F GSLI VS+S D RIWD G+ ++ L V
Sbjct: 144 LLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVL-SGHLQWVYC 202
Query: 202 VKFSPNGKYILAATLDNTLKLWDSKVVT 229
SP+ + +A + ++ LW + T
Sbjct: 203 CSISPDCSMLCSAAGEKSVFLWSMRSYT 230
Score = 126 (49.4 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 44/148 (29%), Positives = 66/148 (44%)
Query: 17 YVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG----- 71
Y L L GH +V S FSP+ L ++S D + +W Y G+ +++ +L
Sbjct: 229 YTLIRKLEGHQSSVVSCDFSPDSALLVTASYDTNVIMWDPYTGERLRSLHHTQLSPPMDD 288
Query: 72 ----ISD---VAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYV--FCCNFNPQ 122
IS V +S + L + +DD+ L+IW L LKT + CC F P
Sbjct: 289 SDVHISSLRSVCFSPEGLYLATVADDRLLRIWALE----LKTPIAFAPMTNGLCCTFFPH 344
Query: 123 SNLIVSGSFDESVRIWDV-RTGKCLKTL 149
+I +G+ D V+ W R LK L
Sbjct: 345 GGVIATGTRDGHVQFWTAPRVLSSLKHL 372
>UNIPROTKB|F1NNQ9 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0071001 "U4/U6 snRNP" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AADN02026938
EMBL:AADN02026937 IPI:IPI00576508 Ensembl:ENSGALT00000014388
Uniprot:F1NNQ9
Length = 521
Score = 311 (114.5 bits), Expect = 2.4e-27, P = 2.4e-27
Identities = 63/208 (30%), Positives = 115/208 (55%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI---SGHKLGISDVAWSS 79
+ GH+ V+ V + P+G +L ++ D ++W D + ++ I GH G+ D+A+ +
Sbjct: 318 IEGHSMRVARVMWHPSGRFLGTTCYDHSWRLW---DLEAQEEILHQEGHSKGVYDIAFHT 374
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
D L +G D ++W+L +G+C+ L+GH ++ NF+P + +GS D + ++WD
Sbjct: 375 DGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGLNFSPNGYHVATGSGDNTCKVWD 434
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRD-GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 198
+R KC+ T+PAH + V+ V F + G+ +++ +YD +IW LKTL +
Sbjct: 435 LRQRKCIYTIPAHQNLVTGVKFEPNHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGK- 493
Query: 199 VSFVKFSPNGKYILAATLDNTLKLWDSK 226
V + S +G+ I + D T KLW ++
Sbjct: 494 VMGLDISLDGQLIATCSYDRTFKLWTAE 521
Score = 301 (111.0 bits), Expect = 3.1e-26, P = 3.1e-26
Identities = 65/214 (30%), Positives = 108/214 (50%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEW--------LASSSADKLIKIWGAYDGKFEKTISGHKL 70
L TL GH+ V ++ F P LAS +AD +K+W + I GH +
Sbjct: 264 LVHTLRGHSTNVGAIVFHPKATVSLDKKDVNLASCAADGSVKLWSLESDEPVADIEGHSM 323
Query: 71 GISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 130
++ V W R L + D + ++W+L + + + +GHS V+ F+ +L +G
Sbjct: 324 RVARVMWHPSGRFLGTTCYDHSWRLWDLEAQEEILHQEGHSKGVYDIAFHTDGSLAGTGG 383
Query: 131 FDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 190
D R+WD+RTG+C+ L H + ++F+ +G + + S D C++WD +C+ T
Sbjct: 384 LDAFGRVWDLRTGRCIMFLEGHLKEIYGLNFSPNGYHVATGSGDNTCKVWDLRQRKCIYT 443
Query: 191 LIDDDNPPVSFVKFSPN-GKYILAATLDNTLKLW 223
+ N V+ VKF PN G ++L DNT K+W
Sbjct: 444 IPAHQNL-VTGVKFEPNHGNFLLTGAYDNTAKIW 476
Score = 257 (95.5 bits), Expect = 2.2e-21, P = 2.2e-21
Identities = 60/208 (28%), Positives = 102/208 (49%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW------S 78
G + +S FSPN + LA++ L K+W D T+ GH + + + S
Sbjct: 228 GDDRPLSYCHFSPNSKLLATACWSGLCKLWSVPDCNLVHTLRGHSTNVGAIVFHPKATVS 287
Query: 79 SDSR--LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 136
D + L S + D ++K+W L S + + ++GHS V ++P + + +D S R
Sbjct: 288 LDKKDVNLASCAADGSVKLWSLESDEPVADIEGHSMRVARVMWHPSGRFLGTTCYDHSWR 347
Query: 137 IWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 196
+WD+ + + HS V + F+ DGSL + D R+WD +G+C+ L +
Sbjct: 348 LWDLEAQEEILHQEGHSKGVYDIAFHTDGSLAGTGGLDAFGRVWDLRTGRCIMFL-EGHL 406
Query: 197 PPVSFVKFSPNGKYILAATLDNTLKLWD 224
+ + FSPNG ++ + DNT K+WD
Sbjct: 407 KEIYGLNFSPNGYHVATGSGDNTCKVWD 434
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 311 (114.5 bits), Expect = 2.9e-27, P = 2.9e-27
Identities = 61/203 (30%), Positives = 102/203 (50%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
L GH+ V FSP+ +L SSS D +++W GH + D +S
Sbjct: 299 LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGY 358
Query: 83 LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 142
VSG D+ ++W + L+ GH V C F+P SN + +GS D +VR+WDV
Sbjct: 359 YFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLN 418
Query: 143 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 202
G C++ H P+ ++ F+ +G + + + DG +WD G + L V +
Sbjct: 419 GNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGEL-KGHTDTVCSL 477
Query: 203 KFSPNGKYILAATLDNTLKLWDS 225
+FS +G+ + + ++DNT++LWD+
Sbjct: 478 RFSRDGEILASGSMDNTVRLWDA 500
Score = 252 (93.8 bits), Expect = 8.7e-21, P = 8.7e-21
Identities = 55/197 (27%), Positives = 93/197 (47%)
Query: 28 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSG 87
K + SVK + + + S D L +I K + GH + ++S D L+S
Sbjct: 262 KKLRSVKQAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSS 321
Query: 88 SDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLK 147
S+D T+++W L + CL KGH+ V+ F+P VSG D R+W + L+
Sbjct: 322 SEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLR 381
Query: 148 TLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPN 207
H V+ F+ + + + + S D R+WD +G C++ + P+ + FSPN
Sbjct: 382 IFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVR-IFTGHKGPIHSLTFSPN 440
Query: 208 GKYILAATLDNTLKLWD 224
G+++ D + LWD
Sbjct: 441 GRFLATGATDGRVLLWD 457
Score = 231 (86.4 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 57/202 (28%), Positives = 99/202 (49%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
L + + +++V + + +A AD +++W +++ KL V ++D
Sbjct: 226 LNAYQQGLTAVDVTDDSSLIAGGFADSTVRVW---------SVTPKKL--RSVKQAADLS 274
Query: 83 LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 142
L+ SDD +I + + LK L GHS V+ +F+P N ++S S D +VR+W ++T
Sbjct: 275 LIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQT 334
Query: 143 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 202
CL H+ PV F+ G VS +D + R+W T Q L+ + V+
Sbjct: 335 FTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLR-IFAGHLADVNCT 393
Query: 203 KFSPNGKYILAATLDNTLKLWD 224
+F PN Y+ + D T++LWD
Sbjct: 394 RFHPNSNYVATGSADRTVRLWD 415
Score = 222 (83.2 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 48/151 (31%), Positives = 82/151 (54%)
Query: 24 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRL 83
AGH V+ +F PN ++A+ SAD+ +++W +G + +GHK I + +S + R
Sbjct: 384 AGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRF 443
Query: 84 LVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD-VRT 142
L +G+ D + +W++ G + LKGH++ V F+ ++ SGS D +VR+WD V+
Sbjct: 444 LATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVKA 503
Query: 143 GKCLKT-------LPAH---SDPVSAVHFNR 163
+ L+T L + S PV +HF R
Sbjct: 504 FEDLETDNSQELLLGTYMTKSTPVVHLHFTR 534
Score = 179 (68.1 bits), Expect = 7.1e-13, P = 7.1e-13
Identities = 56/189 (29%), Positives = 89/189 (47%)
Query: 61 FEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFN 120
F ++ ++ G++ V + DS L+ G D T+++W ++ K L+++K ++
Sbjct: 222 FYTFLNAYQQGLTAVDVTDDSSLIAGGFADSTVRVWSVTPKK-LRSVKQAADL------- 273
Query: 121 PQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 180
+LI S D RI D +T LK L HS PV F+ D + ++SSS DG R+W
Sbjct: 274 ---SLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLW 330
Query: 181 DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTPL-- 238
+ CL N PV +FSP G Y ++ D +LW + P I + L
Sbjct: 331 SLQTFTCLVGY-KGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLAD 389
Query: 239 -NLNYFYRN 246
N F+ N
Sbjct: 390 VNCTRFHPN 398
Score = 118 (46.6 bits), Expect = 0.00020, P = 0.00020
Identities = 40/128 (31%), Positives = 59/128 (46%)
Query: 103 CLKT-LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHF 161
C T L + + + S+LI G D +VR+W V T K L+++ +D
Sbjct: 221 CFYTFLNAYQQGLTAVDVTDDSSLIAGGFADSTVRVWSV-TPKKLRSVKQAADL------ 273
Query: 162 NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLK 221
SLI S D L RI D + LK L P V FSP+ Y+L+++ D T++
Sbjct: 274 ----SLIDKESDDVLERIMDEKTASELKILYGHSGP-VYGASFSPDRNYLLSSSEDGTVR 328
Query: 222 LWDSKVVT 229
LW + T
Sbjct: 329 LWSLQTFT 336
>RGD|1311303 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog (yeast)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=IEA;ISO] [GO:0071001 "U4/U6 snRNP"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 RGD:1311303 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 KO:K12662 CTD:9128
GeneTree:ENSGT00690000101787 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:CH473978 IPI:IPI00357902 RefSeq:NP_001100129.1
UniGene:Rn.162812 Ensembl:ENSRNOT00000019910 GeneID:298095
KEGG:rno:298095 UCSC:RGD:1311303 NextBio:643144 Uniprot:D4A7J8
Length = 521
Score = 310 (114.2 bits), Expect = 3.1e-27, P = 3.1e-27
Identities = 63/205 (30%), Positives = 112/205 (54%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI---SGHKLGISDVAWSS 79
+ GHT V+ V + P+G +L ++ D+ ++W D + ++ I GH +G+ D+A+
Sbjct: 318 IEGHTVRVARVMWHPSGRFLGTTCYDRSWRLW---DLEAQEEILHQEGHSMGVYDIAFHQ 374
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
D L +G D ++W+L +G+C+ L+GH ++ +F+P I +GS D + ++WD
Sbjct: 375 DGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGISFSPNGYHIATGSGDNTCKVWD 434
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 198
+R +C+ T+PAH + V+ V F G +++ +YD +IW LKTL +
Sbjct: 435 LRQRRCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGK- 493
Query: 199 VSFVKFSPNGKYILAATLDNTLKLW 223
V + S +G+ I + D T KLW
Sbjct: 494 VMGLDISSDGQLIATCSYDRTFKLW 518
Score = 292 (107.8 bits), Expect = 3.2e-25, P = 3.2e-25
Identities = 65/214 (30%), Positives = 107/214 (50%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEW--------LASSSADKLIKIWGAYDGKFEKTISGHKL 70
L TL GH V ++ F P LAS +AD +K+W + I GH +
Sbjct: 264 LLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTV 323
Query: 71 GISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 130
++ V W R L + D++ ++W+L + + + +GHS V+ F+ +L +G
Sbjct: 324 RVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGG 383
Query: 131 FDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 190
D R+WD+RTG+C+ L H + + F+ +G I + S D C++WD +C+ T
Sbjct: 384 LDAFGRVWDLRTGRCIMFLEGHLKEIYGISFSPNGYHIATGSGDNTCKVWDLRQRRCVYT 443
Query: 191 LIDDDNPPVSFVKFSP-NGKYILAATLDNTLKLW 223
+ N V+ VKF P +G ++L DNT K+W
Sbjct: 444 IPAHQNL-VTGVKFEPIHGDFLLTGAYDNTAKIW 476
Score = 259 (96.2 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 59/208 (28%), Positives = 102/208 (49%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRL- 83
G + +S FSPN + LA++ L K+W D T+ GH + + + S +
Sbjct: 228 GDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCSLLHTLRGHNTNVGAIVFHPKSTVS 287
Query: 84 -------LVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 136
L S + D ++K+W L S + + ++GH+ V ++P + + +D S R
Sbjct: 288 LDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWR 347
Query: 137 IWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 196
+WD+ + + HS V + F++DGSL + D R+WD +G+C+ L +
Sbjct: 348 LWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFL-EGHL 406
Query: 197 PPVSFVKFSPNGKYILAATLDNTLKLWD 224
+ + FSPNG +I + DNT K+WD
Sbjct: 407 KEIYGISFSPNGYHIATGSGDNTCKVWD 434
>SGD|S000000402 [details] [associations]
symbol:TAF5 "Subunit (90 kDa) of TFIID and SAGA complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0051123 "RNA polymerase
II transcriptional preinitiation complex assembly" evidence=IC]
[GO:0005669 "transcription factor TFIID complex" evidence=IDA]
[GO:0032947 "protein complex scaffold" evidence=IMP] [GO:0000124
"SAGA complex" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0016568 "chromatin modification" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046695 "SLIK (SAGA-like) complex"
evidence=IDA] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 SGD:S000000402 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003682
EMBL:BK006936 GO:GO:0000124 GO:GO:0046695 InterPro:IPR013720
Pfam:PF08513 EMBL:Z21487 GO:GO:0032947 GO:GO:0043130 GO:GO:0005669
GO:GO:0051123 GeneTree:ENSGT00700000104377 KO:K03130
HOGENOM:HOG000212424 OrthoDB:EOG4S1XG9 EMBL:Z36067 EMBL:AY692890
PIR:S34023 RefSeq:NP_009757.1 PDB:2J49 PDBsum:2J49
ProteinModelPortal:P38129 SMR:P38129 DIP:DIP-740N IntAct:P38129
MINT:MINT-475651 STRING:P38129 PaxDb:P38129 PeptideAtlas:P38129
EnsemblFungi:YBR198C GeneID:852497 KEGG:sce:YBR198C CYGD:YBR198c
OMA:PNINYLA EvolutionaryTrace:P38129 NextBio:971495
Genevestigator:P38129 GermOnline:YBR198C Uniprot:P38129
Length = 798
Score = 315 (115.9 bits), Expect = 3.4e-27, P = 3.4e-27
Identities = 62/208 (29%), Positives = 107/208 (51%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GH+ V S FSP+ ++L S S DK +++W + GH + DV++S
Sbjct: 520 TLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLG 579
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
+ S D+T ++W L+ GH N V C +F+P + +GS D++ R+WDV
Sbjct: 580 HYFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDVS 639
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 201
TG ++ H+ PV ++ DG + + S DG+ +WD +G+ LK + +
Sbjct: 640 TGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQMRGHGKNAIYS 699
Query: 202 VKFSPNGKYILAATLDNTLKLWDSKVVT 229
+ +S G +++ D+T+++WD K T
Sbjct: 700 LSYSKEGNVLISGGADHTVRVWDLKKAT 727
Score = 253 (94.1 bits), Expect = 2.9e-23, Sum P(2) = 2.9e-23
Identities = 45/162 (27%), Positives = 90/162 (55%)
Query: 63 KTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQ 122
KT+ GH + ++S D++ L+SGS+DKT+++W + + L + KGH++ V+ +F+P
Sbjct: 519 KTLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPL 578
Query: 123 SNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 182
+ + S D++ R+W L+ H + V V F+ +G + + S D CR+WD
Sbjct: 579 GHYFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDV 638
Query: 183 ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
++G ++ + P +S + P+G+++ + D + +WD
Sbjct: 639 STGDSVRLFLGHTAPVIS-IAVCPDGRWLSTGSEDGIINVWD 679
Score = 130 (50.8 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 41/154 (26%), Positives = 62/154 (40%)
Query: 103 CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW-----------------DVRTGKC 145
C+ T + + + C +F+ + +G D ++IW D
Sbjct: 458 CMYTFQNTNKDMSCLDFSDDCRIAAAGFQDSYIKIWSLDGSSLNNPNIALNNNDKDEDPT 517
Query: 146 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 205
KTL HS V + F+ D ++S S D R+W + L + N PV V FS
Sbjct: 518 CKTLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSY-KGHNHPVWDVSFS 576
Query: 206 PNGKYILAATLDNTLKLWDSKVVTPAIICSTPLN 239
P G Y A+ D T +LW + P I + LN
Sbjct: 577 PLGHYFATASHDQTARLWSCDHIYPLRIFAGHLN 610
Score = 51 (23.0 bits), Expect = 2.9e-23, Sum P(2) = 2.9e-23
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 18 VLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG 59
V +T K +S + FS + A+ D IKIW + DG
Sbjct: 457 VCMYTFQNTNKDMSCLDFSDDCRIAAAGFQDSYIKIW-SLDG 497
>UNIPROTKB|F1P6A3 [details] [associations]
symbol:WSB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 CTD:55884 KO:K10342 OMA:HHPQVPD
EMBL:AAEX03014719 RefSeq:XP_534697.2 ProteinModelPortal:F1P6A3
Ensembl:ENSCAFT00000015752 GeneID:477500 KEGG:cfa:477500
Uniprot:F1P6A3
Length = 406
Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 67/202 (33%), Positives = 116/202 (57%)
Query: 42 LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS-SDSRLLVSGSDDKTLKIWELSS 100
LA+ D IKIW G +SGH+ + D++++ S S +LVS S DKTL+IW+L+
Sbjct: 128 LATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNK 187
Query: 101 -GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAV 159
GK ++ L GH +V+CC+ +P +++ S + ++SV +W +R+ ++ L H V +
Sbjct: 188 HGKQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSC 247
Query: 160 HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL--------IDDDNPPVSFVK---FSPNG 208
F+ D +L+V++SYD +WD +G+ L+ L +DD + +S ++ FSP G
Sbjct: 248 DFSPDSALLVTASYDTNVIMWDPYTGERLRLLHHTQLDPPMDDSDVHISSLRSVCFSPEG 307
Query: 209 KYILAATLDNTLKLWDSKVVTP 230
Y+ D L++W ++ TP
Sbjct: 308 LYLATVADDRLLRIWALELKTP 329
Score = 241 (89.9 bits), Expect = 5.1e-20, P = 5.1e-20
Identities = 74/240 (30%), Positives = 121/240 (50%)
Query: 18 VLKFTLAGHTKAVSSVKFSPNGEW-LASSSADKLIKIWGAYD-GKFEKTISGHKLGISDV 75
+L L+GH V + F+P+G L S+S DK ++IW GK + +SGH +
Sbjct: 146 LLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQWVYCC 205
Query: 76 AWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 135
+ S D +L S + +K++ +W + S ++ L+GH + V C+F+P S L+V+ S+D +V
Sbjct: 206 SISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPDSALLVTASYDTNV 265
Query: 136 RIWDVRTGKCLKTLPAHS--DPV---SAVH--------FNRDGSLIVSSSYDGLCRIWDT 182
+WD TG+ L+ L H+ DP S VH F+ +G + + + D L RIW
Sbjct: 266 IMWDPYTGERLRLLH-HTQLDPPMDDSDVHISSLRSVCFSPEGLYLATVADDRLLRIWAL 324
Query: 183 ASGQCLKTLIDDDNPPVSFV--KFSPNGKYILAATLDNTLKLWDSKVVTPAI--ICSTPL 238
LKT I P + + F P+G I T D ++ W + V ++ +C L
Sbjct: 325 E----LKTPIAFA-PMTNGLCCTFFPHGGVIATGTRDGHVQFWTAPRVLSSLKHLCRKAL 379
Score = 150 (57.9 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 60/208 (28%), Positives = 90/208 (43%)
Query: 32 SVKFSPNGEWLASSSADKLIKI--WGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSD 89
SV FSP+G W A S ++K+ W + K G + SS + GS
Sbjct: 33 SVAFSPDGSWFAWSQGHCIVKLIPWPLEEQFIPK-------GFEAKSRSSKNDTKGRGSP 85
Query: 90 -DKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQ----SNLIVS-GSFDESVRIWDVRTG 143
+KTL ++ G + +PQ S LI++ G D ++IW+V+TG
Sbjct: 86 KEKTLDCGQIVWGLAFSPWPSPPSRKLWARHHPQVPDISCLILATGLNDGQIKIWEVQTG 145
Query: 144 KCLKTLPAHSDPVSAVHFNRDGSLI-VSSSYDGLCRIWD-TASGQCLKTLIDDDNPPVSF 201
L L H D V + F GSLI VS+S D RIWD G+ ++ L V
Sbjct: 146 LLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVL-SGHLQWVYC 204
Query: 202 VKFSPNGKYILAATLDNTLKLWDSKVVT 229
SP+ + +A + ++ LW + T
Sbjct: 205 CSISPDCSMLCSAAGEKSVFLWSMRSYT 232
Score = 124 (48.7 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 42/148 (28%), Positives = 64/148 (43%)
Query: 17 YVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKL------ 70
Y L L GH +V S FSP+ L ++S D + +W Y G+ + + +L
Sbjct: 231 YTLIRKLEGHQSSVVSCDFSPDSALLVTASYDTNVIMWDPYTGERLRLLHHTQLDPPMDD 290
Query: 71 ------GISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYV--FCCNFNPQ 122
+ V +S + L + +DD+ L+IW L LKT + CC F P
Sbjct: 291 SDVHISSLRSVCFSPEGLYLATVADDRLLRIWALE----LKTPIAFAPMTNGLCCTFFPH 346
Query: 123 SNLIVSGSFDESVRIWDV-RTGKCLKTL 149
+I +G+ D V+ W R LK L
Sbjct: 347 GGVIATGTRDGHVQFWTAPRVLSSLKHL 374
>UNIPROTKB|F1NII4 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 PRINTS:PR00319 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:AADN02025808 EMBL:AADN02025807
IPI:IPI00592422 ProteinModelPortal:F1NII4
Ensembl:ENSGALT00000007475 Uniprot:F1NII4
Length = 498
Score = 307 (113.1 bits), Expect = 5.3e-27, P = 5.3e-27
Identities = 64/176 (36%), Positives = 98/176 (55%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
+L GHT+AV SV FSP G++LAS S D ++ W + T GH+ + +AWS D
Sbjct: 122 SLEGHTEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPQFTAKGHRHWVLSIAWSPDG 181
Query: 82 RLLVSGSDDKTLKIWELSSGKCL-KTLKGHSNYVFC-C----NFNPQSNLIVSGSFDESV 135
+ L SG + + +W+ ++G + + L GHS ++ C C + NP+ + S S D S+
Sbjct: 182 KKLASGCKNSQIFLWDPATGNQIGRVLTGHSKWITCLCWEPLHINPECRYLASASKDGSI 241
Query: 136 RIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 191
RIWD G+C K L H+ V+ V + DG L+ SSS D ++W + G +TL
Sbjct: 242 RIWDTLMGRCDKILTGHTQSVTCVKWGGDG-LLYSSSQDRTIKVWRSQDGILCRTL 296
Score = 262 (97.3 bits), Expect = 5.4e-22, P = 5.4e-22
Identities = 48/116 (41%), Positives = 72/116 (62%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
+ GH ++ V FSP+ +AS+S DK IK+W GK+ ++ GH + +AWS+DSR
Sbjct: 381 MTGHQALINQVLFSPDTRIIASASFDKSIKLWEGRTGKYLTSLRGHVSAVYQIAWSADSR 440
Query: 83 LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
LLVSGS D TLK+W+ + K L GH++ VF +++P + SG D+ +RIW
Sbjct: 441 LLVSGSSDSTLKVWDAETKKLAIDLPGHADEVFATDWSPDGQRVASGGKDKCLRIW 496
Score = 254 (94.5 bits), Expect = 4.1e-21, P = 4.1e-21
Identities = 54/142 (38%), Positives = 84/142 (59%)
Query: 40 EWLASSSADKLIKIWG-AYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWEL 98
E L S S D + +W A D K + ++GH+ I+ V +S D+R++ S S DK++K+WE
Sbjct: 355 ERLVSGSDDFTLFLWRPAEDKKPLERMTGHQALINQVLFSPDTRIIASASFDKSIKLWEG 414
Query: 99 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSA 158
+GK L +L+GH + V+ ++ S L+VSGS D ++++WD T K LP H+D V A
Sbjct: 415 RTGKYLTSLRGHVSAVYQIAWSADSRLLVSGSSDSTLKVWDAETKKLAIDLPGHADEVFA 474
Query: 159 VHFNRDGSLIVSSSYDGLCRIW 180
++ DG + S D RIW
Sbjct: 475 TDWSPDGQRVASGGKDKCLRIW 496
Score = 218 (81.8 bits), Expect = 3.5e-17, P = 3.5e-17
Identities = 60/213 (28%), Positives = 111/213 (52%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
L GHT++V+ VK+ +G L SSS D+ IK+W + DG +T+ GH ++ +A S+D
Sbjct: 255 LTGHTQSVTCVKWGGDG-LLYSSSQDRTIKVWRSQDGILCRTLQGHAHWVNTMALSTDYV 313
Query: 83 LLVSGSD--DKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW-D 139
L + + T+ ++S K Y P+ +VSGS D ++ +W
Sbjct: 314 LRTGAFEPAEATINPQDMSGSLAELKDKAQQRYDKVRGQGPER--LVSGSDDFTLFLWRP 371
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
K L+ + H ++ V F+ D +I S+S+D ++W+ +G+ L +L + V
Sbjct: 372 AEDKKPLERMTGHQALINQVLFSPDTRIIASASFDKSIKLWEGRTGKYLTSLRGHVSA-V 430
Query: 200 SFVKFSPNGKYILAATLDNTLKLWDSKVVTPAI 232
+ +S + + +++ + D+TLK+WD++ AI
Sbjct: 431 YQIAWSADSRLLVSGSSDSTLKVWDAETKKLAI 463
Score = 216 (81.1 bits), Expect = 5.9e-17, P = 5.9e-17
Identities = 48/141 (34%), Positives = 77/141 (54%)
Query: 84 LVSGSDDKTLKIWELSSGKC-LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 142
LVSGSDD TL +W + K L+ + GH + F+P + +I S SFD+S+++W+ RT
Sbjct: 357 LVSGSDDFTLFLWRPAEDKKPLERMTGHQALINQVLFSPDTRIIASASFDKSIKLWEGRT 416
Query: 143 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 202
GK L +L H V + ++ D L+VS S D ++WD A + L + V
Sbjct: 417 GKYLTSLRGHVSAVYQIAWSADSRLLVSGSSDSTLKVWD-AETKKLAIDLPGHADEVFAT 475
Query: 203 KFSPNGKYILAATLDNTLKLW 223
+SP+G+ + + D L++W
Sbjct: 476 DWSPDGQRVASGGKDKCLRIW 496
Score = 206 (77.6 bits), Expect = 7.1e-16, P = 7.1e-16
Identities = 57/212 (26%), Positives = 105/212 (49%)
Query: 23 LAGHTKAVSSVKFSP---NGE--WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW 77
L GH+K ++ + + P N E +LAS+S D I+IW G+ +K ++GH ++ V W
Sbjct: 208 LTGHSKWITCLCWEPLHINPECRYLASASKDGSIRIWDTLMGRCDKILTGHTQSVTCVKW 267
Query: 78 SSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES--- 134
D LL S S D+T+K+W G +TL+GH+++V + ++ +G+F+ +
Sbjct: 268 GGDG-LLYSSSQDRTIKVWRSQDGILCRTLQGHAHWVNTMALSTDY-VLRTGAFEPAEAT 325
Query: 135 VRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD 194
+ D+ +G + V + +VS S D +W A + +
Sbjct: 326 INPQDM-SGSLAELKDKAQQRYDKVR-GQGPERLVSGSDDFTLFLWRPAEDKKPLERMTG 383
Query: 195 DNPPVSFVKFSPNGKYILAATLDNTLKLWDSK 226
++ V FSP+ + I +A+ D ++KLW+ +
Sbjct: 384 HQALINQVLFSPDTRIIASASFDKSIKLWEGR 415
Score = 198 (74.8 bits), Expect = 5.3e-15, P = 5.3e-15
Identities = 45/151 (29%), Positives = 78/151 (51%)
Query: 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG-KFEKTISGHKLGISDVAW- 77
+FT GH V S+ +SP+G+ LAS + I +W G + + ++GH I+ + W
Sbjct: 162 QFTAKGHRHWVLSIAWSPDGKKLASGCKNSQIFLWDPATGNQIGRVLTGHSKWITCLCWE 221
Query: 78 ----SSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 133
+ + R L S S D +++IW+ G+C K L GH+ V C + L+ S S D
Sbjct: 222 PLHINPECRYLASASKDGSIRIWDTLMGRCDKILTGHTQSVTCVKWGGDG-LLYSSSQDR 280
Query: 134 SVRIWDVRTGKCLKTLPAHSDPVSAVHFNRD 164
++++W + G +TL H+ V+ + + D
Sbjct: 281 TIKVWRSQDGILCRTLQGHAHWVNTMALSTD 311
Score = 153 (58.9 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 32/129 (24%), Positives = 65/129 (50%)
Query: 102 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHF 161
+C +L+GH+ V F+P + SGS D +VR WD+ T T H V ++ +
Sbjct: 118 RCTSSLEGHTEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPQFTAKGHRHWVLSIAW 177
Query: 162 NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV-----KFSPNGKYILAATL 216
+ DG + S + +WD A+G + ++ + ++ + +P +Y+ +A+
Sbjct: 178 SPDGKKLASGCKNSQIFLWDPATGNQIGRVLTGHSKWITCLCWEPLHINPECRYLASASK 237
Query: 217 DNTLKLWDS 225
D ++++WD+
Sbjct: 238 DGSIRIWDT 246
Score = 131 (51.2 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 26/75 (34%), Positives = 38/75 (50%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
+L GH AV + +S + L S S+D +K+W A K + GH + WS D
Sbjct: 422 SLRGHVSAVYQIAWSADSRLLVSGSSDSTLKVWDAETKKLAIDLPGHADEVFATDWSPDG 481
Query: 82 RLLVSGSDDKTLKIW 96
+ + SG DK L+IW
Sbjct: 482 QRVASGGKDKCLRIW 496
>MGI|MGI:1919039 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919039 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0003713
GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OMA:YVDSEGP OrthoDB:EOG4NCMCF
EMBL:AK033477 EMBL:AK089463 EMBL:BC013550 IPI:IPI00128308
RefSeq:NP_598727.1 UniGene:Mm.291777 ProteinModelPortal:Q91WQ5
SMR:Q91WQ5 IntAct:Q91WQ5 STRING:Q91WQ5 PhosphoSite:Q91WQ5
PRIDE:Q91WQ5 Ensembl:ENSMUST00000093039 Ensembl:ENSMUST00000165628
GeneID:102162 KEGG:mmu:102162 UCSC:uc009nww.1 InParanoid:Q91WQ5
NextBio:355322 Bgee:Q91WQ5 Genevestigator:Q91WQ5
GermOnline:ENSMUSG00000038697 Uniprot:Q91WQ5
Length = 589
Score = 309 (113.8 bits), Expect = 6.8e-27, P = 6.8e-27
Identities = 69/217 (31%), Positives = 110/217 (50%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI--SGHKLGISDVAWSSD 80
L GH V S +F + L S S D I+ W G F T+ GH + DV S
Sbjct: 338 LRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDL--GSFTNTVLYQGHAYPVWDVDISPF 395
Query: 81 SRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 140
S SGS D+T ++W L+ GH V C F+P SN + +GS D++VR+W
Sbjct: 396 SLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSA 455
Query: 141 RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 200
+ G ++ H PV ++ F+ +G + S+ D ++WD ASG K L + ++
Sbjct: 456 QQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDS-IT 514
Query: 201 FVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTP 237
+ FSP+ I +A++DN++++WD + + C+TP
Sbjct: 515 SLAFSPDSGLIASASMDNSVRVWDIR----STCCNTP 547
Score = 275 (101.9 bits), Expect = 3.5e-23, P = 3.5e-23
Identities = 53/135 (39%), Positives = 81/135 (60%)
Query: 17 YVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA 76
Y L+ AGH V VKF PN +LA+ S DK +++W A G + +GH+ + ++
Sbjct: 417 YPLRI-YAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLS 475
Query: 77 WSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 136
+S + + L S +D+ LK+W+L+SG K L+GH++ + F+P S LI S S D SVR
Sbjct: 476 FSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLIASASMDNSVR 535
Query: 137 IWDVRTGKCLKTLPA 151
+WD+R+ C T PA
Sbjct: 536 VWDIRS-TCCNT-PA 548
Score = 262 (97.3 bits), Expect = 8.9e-22, P = 8.9e-22
Identities = 53/170 (31%), Positives = 87/170 (51%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKLGISDVAWSSDSRL 83
GH V V SP + AS S D+ ++W ++D + I +GH + V + +S
Sbjct: 382 GHAYPVWDVDISPFSLYFASGSHDRTARLW-SFDRTYPLRIYAGHLADVDCVKFHPNSNY 440
Query: 84 LVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 143
L +GS DKT+++W G ++ GH V +F+P + S D+ +++WD+ +G
Sbjct: 441 LATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASG 500
Query: 144 KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 193
K L H+D ++++ F+ D LI S+S D R+WD S C T D
Sbjct: 501 TLFKELRGHTDSITSLAFSPDSGLIASASMDNSVRVWDIRS-TCCNTPAD 549
Score = 216 (81.1 bits), Expect = 8.5e-17, P = 8.5e-17
Identities = 50/162 (30%), Positives = 79/162 (48%)
Query: 63 KTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQ 122
K + GH + + +DS L+S S+D +++ W+L S +GH+ V+ + +P
Sbjct: 336 KILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPF 395
Query: 123 SNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 182
S SGS D + R+W L+ H V V F+ + + + + S D R+W
Sbjct: 396 SLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSA 455
Query: 183 ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
G ++ L PV + FSPNGKY+ +A D LKLWD
Sbjct: 456 QQGNSVR-LFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWD 496
Score = 170 (64.9 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 35/102 (34%), Positives = 56/102 (54%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLL 84
GH V S+ FSPNG++LAS+ D+ +K+W G K + GH I+ +A+S DS L+
Sbjct: 466 GHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLI 525
Query: 85 VSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLI 126
S S D ++++W++ S C G S + SN++
Sbjct: 526 ASASMDNSVRVWDIRSTCCNTPADGSSGELVGVYTGQMSNVL 567
Score = 157 (60.3 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 48/197 (24%), Positives = 84/197 (42%)
Query: 30 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSD 89
+++ + S + + LA+ + IK+W K + H + S + + D+ +
Sbjct: 271 LNTAEISSDSKLLAAGFDNSCIKLWSLRSKKLKS--EPHHVDTSRIRLACDTLEEEENEE 328
Query: 90 DKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTL 149
D T G +K L+GH V+ F S+ ++S S D S+R WD+ +
Sbjct: 329 DNT--------GTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLY 380
Query: 150 PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK 209
H+ PV V + S S+D R+W L+ + V VKF PN
Sbjct: 381 QGHAYPVWDVDISPFSLYFASGSHDRTARLWSFDRTYPLR-IYAGHLADVDCVKFHPNSN 439
Query: 210 YILAATLDNTLKLWDSK 226
Y+ + D T++LW ++
Sbjct: 440 YLATGSTDKTVRLWSAQ 456
>MGI|MGI:1913972 [details] [associations]
symbol:Spag16 "sperm associated antigen 16" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874
"microtubule" evidence=IDA] [GO:0005929 "cilium" evidence=IEA]
[GO:0005930 "axoneme" evidence=IDA] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0030030 "cell projection organization" evidence=IEA]
[GO:0035085 "cilium axoneme" evidence=IDA] [GO:0042384 "cilium
assembly" evidence=IDA] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1913972 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086
GeneTree:ENSGT00700000104486 CTD:79582 HOVERGEN:HBG086482
OMA:EGHNHAV OrthoDB:EOG41ZF9F EMBL:AF490391 EMBL:AK014865
EMBL:AK015884 EMBL:AK016618 EMBL:AK083083 EMBL:BC120668
IPI:IPI00177216 IPI:IPI00473221 IPI:IPI00556714 IPI:IPI00556881
RefSeq:NP_001258462.1 RefSeq:NP_080004.1 RefSeq:NP_083436.2
UniGene:Mm.440554 ProteinModelPortal:Q8K450 SMR:Q8K450
DIP:DIP-59752N STRING:Q8K450 PhosphoSite:Q8K450 PaxDb:Q8K450
PRIDE:Q8K450 Ensembl:ENSMUST00000065425 Ensembl:ENSMUST00000113940
GeneID:66722 KEGG:mmu:66722 UCSC:uc007bjg.1 UCSC:uc007bjh.1
UCSC:uc007bji.1 HOGENOM:HOG000256703 InParanoid:Q0VBE7
NextBio:322475 Bgee:Q8K450 CleanEx:MM_SPAG16 Genevestigator:Q8K450
GermOnline:ENSMUSG00000053153 Uniprot:Q8K450
Length = 639
Score = 310 (114.2 bits), Expect = 6.8e-27, P = 6.8e-27
Identities = 70/207 (33%), Positives = 108/207 (52%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
T +GHT +S F P+G LA+SS D IK+W G+ T+ GH + W S
Sbjct: 397 TGSGHTDWLSGCCFHPSGSKLATSSGDSTIKLWDLNKGECTLTLEGHNHAVWSCTWHSCG 456
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
+ S S D T KIW+++S +C TL GH++ V F P SN++++ S D+++ +WD R
Sbjct: 457 DFVASASLDMTSKIWDVNSERCRYTLYGHTDSVNSIEFFPFSNILLTASADKTLSVWDAR 516
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 201
TGKC ++L H V+ F G +I S G+ ++WD L ++ D P S
Sbjct: 517 TGKCEQSLYGHMHSVNDATFTPRGHIIASCDARGVTKLWDFRK---LIPIVSIDVGPSSG 573
Query: 202 --VKFSPNGKYILAATLDNTLKLWDSK 226
V F +G+ + A+ + + L D K
Sbjct: 574 NEVNFDQSGRVLAQASANGIIHLLDLK 600
Score = 307 (113.1 bits), Expect = 1.4e-26, P = 1.4e-26
Identities = 63/207 (30%), Positives = 110/207 (53%)
Query: 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV 85
H VS + P ++L S S D+L K+ G G T SGH +S + L
Sbjct: 359 HELPVSCIVMHPCRDYLISCSEDRLWKMVGLPQGNVLLTGSGHTDWLSGCCFHPSGSKLA 418
Query: 86 SGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 145
+ S D T+K+W+L+ G+C TL+GH++ V+ C ++ + + S S D + +IWDV + +C
Sbjct: 419 TSSGDSTIKLWDLNKGECTLTLEGHNHAVWSCTWHSCGDFVASASLDMTSKIWDVNSERC 478
Query: 146 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 205
TL H+D V+++ F ++++++S D +WD +G+C ++L + V+ F+
Sbjct: 479 RYTLYGHTDSVNSIEFFPFSNILLTASADKTLSVWDARTGKCEQSLYGHMHS-VNDATFT 537
Query: 206 PNGKYILAATLDNTLKLWDSKVVTPAI 232
P G I + KLWD + + P +
Sbjct: 538 PRGHIIASCDARGVTKLWDFRKLIPIV 564
Score = 263 (97.6 bits), Expect = 8.4e-22, P = 8.4e-22
Identities = 63/204 (30%), Positives = 107/204 (52%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GH AV S + G+++AS+S D KIW + T+ GH ++ + + S
Sbjct: 439 TLEGHNHAVWSCTWHSCGDFVASASLDMTSKIWDVNSERCRYTLYGHTDSVNSIEFFPFS 498
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
+L++ S DKTL +W+ +GKC ++L GH + V F P+ ++I S ++WD R
Sbjct: 499 NILLTASADKTLSVWDARTGKCEQSLYGHMHSVNDATFTPRGHIIASCDARGVTKLWDFR 558
Query: 142 TGKCLKTLPAHSDPVSA--VHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
K + + P S V+F++ G ++ +S +G+ + D SGQ K L+ ++ V
Sbjct: 559 --KLIPIVSIDVGPSSGNEVNFDQSGRVLAQASANGIIHLLDLKSGQIHK-LVGHESE-V 614
Query: 200 SFVKFSPNGKYILAATLDNTLKLW 223
V FS G+ + + D T++LW
Sbjct: 615 HSVVFSHLGENLYSGGSDGTIRLW 638
Score = 240 (89.5 bits), Expect = 2.6e-19, P = 2.6e-19
Identities = 50/170 (29%), Positives = 89/170 (52%)
Query: 57 YDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFC 116
+D K H+L +S + L+S S+D+ K+ L G L T GH++++
Sbjct: 348 FDYKLNNIFRLHELPVSCIVMHPCRDYLISCSEDRLWKMVGLPQGNVLLTGSGHTDWLSG 407
Query: 117 CNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGL 176
C F+P + + + S D ++++WD+ G+C TL H+ V + ++ G + S+S D
Sbjct: 408 CCFHPSGSKLATSSGDSTIKLWDLNKGECTLTLEGHNHAVWSCTWHSCGDFVASASLDMT 467
Query: 177 CRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSK 226
+IWD S +C TL + V+ ++F P +L A+ D TL +WD++
Sbjct: 468 SKIWDVNSERCRYTLYGHTDS-VNSIEFFPFSNILLTASADKTLSVWDAR 516
Score = 192 (72.6 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 46/164 (28%), Positives = 84/164 (51%)
Query: 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 79
++TL GHT +V+S++F P L ++SADK + +W A GK E+++ GH ++D ++
Sbjct: 479 RYTLYGHTDSVNSIEFFPFSNILLTASADKTLSVWDARTGKCEQSLYGHMHSVNDATFTP 538
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLK-GHS--NYVFCCNFNPQSNLIVSGSFDESVR 136
++ S K+W+ + ++ G S N V NF+ ++ S + +
Sbjct: 539 RGHIIASCDARGVTKLWDFRKLIPIVSIDVGPSSGNEV---NFDQSGRVLAQASANGIIH 595
Query: 137 IWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 180
+ D+++G+ K L H V +V F+ G + S DG R+W
Sbjct: 596 LLDLKSGQIHK-LVGHESEVHSVVFSHLGENLYSGGSDGTIRLW 638
>POMBASE|SPAC630.14c [details] [associations]
symbol:tup12 "transcriptional corepressor Tup12"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043156 "chromatin remodeling in response to cation stress"
evidence=IMP] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] [GO:0071473 "cellular response to cation stress"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC630.14c InterPro:IPR001632 GO:GO:0005829
GO:GO:0003714 GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 PRINTS:PR00319 HOGENOM:HOG000200558
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:U92792 PIR:T38992 RefSeq:NP_592910.2 ProteinModelPortal:Q9UUG8
STRING:Q9UUG8 EnsemblFungi:SPAC630.14c.1 GeneID:2543402
NextBio:20804417 GO:GO:0043156 Uniprot:Q9UUG8
Length = 598
Score = 309 (113.8 bits), Expect = 7.1e-27, P = 7.1e-27
Identities = 69/211 (32%), Positives = 121/211 (57%)
Query: 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI---SGHKLG---ISDVAWSS 79
HT + V+FS +G++LA+ ++ ++ GK + S + G + VA+S
Sbjct: 298 HTSVICYVRFSADGKFLATG-CNRAAMVFNVETGKLITLLQEESSKREGDLYVRSVAFSP 356
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
D + L +G +D+ ++IW+++ + + L GH ++ +F+ +VSGS D +V +WD
Sbjct: 357 DGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWD 416
Query: 140 VRTGKCLKTLPAHSDP-VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 198
V G+ + L H+D V+ V F+ DG I + S D + RIW T+SG ++ L +
Sbjct: 417 VEAGE--QKLILHTDDGVTTVMFSPDGQFIAAGSLDKVIRIW-TSSGTLVEQLHGHEESV 473
Query: 199 VSFVKFSPNGKYILAATLDNTLKLWDSKVVT 229
S V FSP+GKY+++ +LDNT+KLW+ + V+
Sbjct: 474 YS-VAFSPDGKYLVSGSLDNTIKLWELQCVS 503
Score = 277 (102.6 bits), Expect = 2.2e-23, P = 2.2e-23
Identities = 64/206 (31%), Positives = 111/206 (53%)
Query: 30 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSD 89
V SV FSP+G++LA+ D+ I+IW + + ++GH+ I + +S D + LVSGS
Sbjct: 349 VRSVAFSPDGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSG 408
Query: 90 DKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTL 149
D+T+ +W++ +G+ K + + V F+P I +GS D+ +RIW +G ++ L
Sbjct: 409 DRTVCLWDVEAGE-QKLILHTDDGVTTVMFSPDGQFIAAGSLDKVIRIW-TSSGTLVEQL 466
Query: 150 PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA------------SGQCLKTLIDDDNP 197
H + V +V F+ DG +VS S D ++W+ G C +T +
Sbjct: 467 HGHEESVYSVAFSPDGKYLVSGSLDNTIKLWELQCVSNVAPSMYKEGGICKQTFTGHKDF 526
Query: 198 PVSFVKFSPNGKYILAATLDNTLKLW 223
+S V SP+GK+I++ + D T++ W
Sbjct: 527 ILS-VTVSPDGKWIISGSKDRTIQFW 551
Score = 272 (100.8 bits), Expect = 7.6e-23, P = 7.6e-23
Identities = 65/213 (30%), Positives = 106/213 (49%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
L GH + + S+ FS +G+ L S S D+ + +W G+ +K I G++ V +S D +
Sbjct: 384 LTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVEAGE-QKLILHTDDGVTTVMFSPDGQ 442
Query: 83 LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 142
+ +GS DK ++IW SSG ++ L GH V+ F+P +VSGS D ++++W+++
Sbjct: 443 FIAAGSLDKVIRIWT-SSGTLVEQLHGHEESVYSVAFSPDGKYLVSGSLDNTIKLWELQC 501
Query: 143 ------------GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 190
G C +T H D + +V + DG I+S S D + W S T
Sbjct: 502 VSNVAPSMYKEGGICKQTFTGHKDFILSVTVSPDGKWIISGSKDRTIQFWSPDSPHSQLT 561
Query: 191 LIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 223
L +N +S V SPNG + D ++W
Sbjct: 562 LQGHNNSVIS-VAVSPNGHCFATGSGDLRARIW 593
Score = 134 (52.2 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 26/79 (32%), Positives = 39/79 (49%)
Query: 18 VLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW 77
+ K T GH + SV SP+G+W+ S S D+ I+ W + T+ GH + VA
Sbjct: 515 ICKQTFTGHKDFILSVTVSPDGKWIISGSKDRTIQFWSPDSPHSQLTLQGHNNSVISVAV 574
Query: 78 SSDSRLLVSGSDDKTLKIW 96
S + +GS D +IW
Sbjct: 575 SPNGHCFATGSGDLRARIW 593
Score = 122 (48.0 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 37/143 (25%), Positives = 67/143 (46%)
Query: 100 SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDP---- 155
S + L TL+ H++ + F+ + +G + + +++V TGK + L S
Sbjct: 289 SVQLLHTLE-HTSVICYVRFSADGKFLATGC-NRAAMVFNVETGKLITLLQEESSKREGD 346
Query: 156 --VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILA 213
V +V F+ DG + + D RIWD A + + L + S + FS +GK +++
Sbjct: 347 LYVRSVAFSPDGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYS-LDFSKDGKTLVS 405
Query: 214 ATLDNTLKLWDSKVVTPAIICST 236
+ D T+ LWD + +I T
Sbjct: 406 GSGDRTVCLWDVEAGEQKLILHT 428
>ZFIN|ZDB-GENE-040718-126 [details] [associations]
symbol:wdr83 "WD repeat domain containing 83"
species:7955 "Danio rerio" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040718-126 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091642
EMBL:BC076138 IPI:IPI00510406 RefSeq:NP_001002429.1
UniGene:Dr.80944 ProteinModelPortal:Q6DH44 STRING:Q6DH44
PRIDE:Q6DH44 GeneID:436702 KEGG:dre:436702 CTD:84292
HOVERGEN:HBG105288 InParanoid:Q6DH44 KO:K13124 OrthoDB:EOG4ZCT4V
NextBio:20831145 ArrayExpress:Q6DH44 Uniprot:Q6DH44
Length = 315
Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
Identities = 67/198 (33%), Positives = 117/198 (59%)
Query: 29 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGS 88
AV +V+F+ +G +L + +DK +K+W G KT SGH + D S D+ L S S
Sbjct: 27 AVRAVRFNADGNYLLTCGSDKSLKLWSVSRGTLLKTYSGHGYEVLDADGSYDNSQLCSCS 86
Query: 89 DDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC--L 146
DKT+ +W+++SG+ + L+GH+ V C FN ++ +++SGS D +VR WD R+ + +
Sbjct: 87 SDKTVILWDVASGQVTRKLRGHAGKVNCVQFNEEATVMLSGSIDGTVRCWDTRSRRMEPI 146
Query: 147 KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP 206
+ L D +S++ + +++ S DG R +D GQ L+ +D P++ V FS
Sbjct: 147 QILDESQDGISSLKVSEHE--LLTGSVDGRVRRYDLRMGQ-LQ--VDYIGSPITCVCFSR 201
Query: 207 NGKYILAATLDNTLKLWD 224
+G+ L+++LD+T++L D
Sbjct: 202 DGQCTLSSSLDSTVRLLD 219
Score = 221 (82.9 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 47/166 (28%), Positives = 92/166 (55%)
Query: 63 KTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQ 122
+T+ + + V +++D L++ DK+LK+W +S G LKT GH V + +
Sbjct: 19 RTVDCQQGAVRAVRFNADGNYLLTCGSDKSLKLWSVSRGTLLKTYSGHGYEVLDADGSYD 78
Query: 123 SNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 182
++ + S S D++V +WDV +G+ + L H+ V+ V FN + ++++S S DG R WDT
Sbjct: 79 NSQLCSCSSDKTVILWDVASGQVTRKLRGHAGKVNCVQFNEEATVMLSGSIDGTVRCWDT 138
Query: 183 ASGQCLKT-LIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKV 227
S + ++D+ +S +K S + +L ++D ++ +D ++
Sbjct: 139 RSRRMEPIQILDESQDGISSLKVSEHE--LLTGSVDGRVRRYDLRM 182
Score = 184 (69.8 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 52/210 (24%), Positives = 101/210 (48%)
Query: 18 VLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW 77
+LK T +GH V S + L S S+DK + +W G+ + + GH ++ V +
Sbjct: 59 LLK-TYSGHGYEVLDADGSYDNSQLCSCSSDKTVILWDVASGQVTRKLRGHAGKVNCVQF 117
Query: 78 SSDSRLLVSGSDDKTLKIWELSSGKC--LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 135
+ ++ +++SGS D T++ W+ S + ++ L + + + + +++GS D V
Sbjct: 118 NEEATVMLSGSIDGTVRCWDTRSRRMEPIQILDESQDGI--SSLKVSEHELLTGSVDGRV 175
Query: 136 RIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD 195
R +D+R G+ + P++ V F+RDG +SSS D R+ D ++G+ L
Sbjct: 176 RRYDLRMGQL--QVDYIGSPITCVCFSRDGQCTLSSSLDSTVRLLDKSTGEMLGEYSGHV 233
Query: 196 NPPVSF-VKFSPNGKYILAATLDNTLKLWD 224
N + ++L+ + D + WD
Sbjct: 234 NKGYKLDCCLTDKDTHVLSCSEDGHVYYWD 263
Score = 133 (51.9 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 48/209 (22%), Positives = 90/209 (43%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE--KTISGHKLGISDVAWSSD 80
L GH V+ V+F+ + S S D ++ W + E + + + GIS + S
Sbjct: 105 LRGHAGKVNCVQFNEEATVMLSGSIDGTVRCWDTRSRRMEPIQILDESQDGISSLKVSEH 164
Query: 81 SRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 140
L++GS D ++ ++L G+ G + C F+ +S S D +VR+ D
Sbjct: 165 E--LLTGSVDGRVRRYDLRMGQLQVDYIGSP--ITCVCFSRDGQCTLSSSLDSTVRLLDK 220
Query: 141 RTGKCLKTLPAHSDP---VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 197
TG+ L H + + ++D + ++S S DG WD G L +
Sbjct: 221 STGEMLGEYSGHVNKGYKLDCCLTDKD-THVLSCSEDGHVYYWDLVEGS-LTLKLPVGKA 278
Query: 198 PVSFVKFSPNGKYILAATLDNTLKLWDSK 226
V + F P +L + ++ +++W ++
Sbjct: 279 VVQSLSFHPTEPRLLTS-MEGRVQVWGAE 306
>ASPGD|ASPL0000046644 [details] [associations]
symbol:AN2021 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001307 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AACD01000032 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR007111 PROSITE:PS50837 RefSeq:XP_659625.1
ProteinModelPortal:Q5BBQ9 EnsemblFungi:CADANIAT00008689
GeneID:2875333 KEGG:ani:AN2021.2 OMA:KQVLKGH OrthoDB:EOG412QDH
Uniprot:Q5BBQ9
Length = 1311
Score = 315 (115.9 bits), Expect = 8.2e-27, P = 8.2e-27
Identities = 71/193 (36%), Positives = 107/193 (55%)
Query: 32 SVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDK 91
SV FSP+ +A+ D I IW A G +KT+ H I +A+S D + LV+ S D
Sbjct: 860 SVAFSPDSRQIAAGFKDGKIFIWDAA-GTLQKTLERHPGAIMSIAFSPDVKQLVTCSTDS 918
Query: 92 TLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPA 151
T+K W+++ G + + GHS +V +P +I SGS D+++++WD TG KTL
Sbjct: 919 TIKRWDITIGGVQEAV-GHSKHVTTMVLSPDGKVIASGSADKTIKLWDAATGDLQKTLTG 977
Query: 152 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 211
H D V V F+ D IVS S + + +IWD A+G+ + DD + V SP+GK+I
Sbjct: 978 HLDTVEKVVFSLDNRQIVSCSSEAV-KIWDAATGKVQNSFESDD--VFTIVAVSPDGKHI 1034
Query: 212 LAATLDNTLKLWD 224
+ + +KLWD
Sbjct: 1035 ASGHCNGRIKLWD 1047
Score = 293 (108.2 bits), Expect = 1.8e-24, P = 1.8e-24
Identities = 69/207 (33%), Positives = 107/207 (51%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L+ L GH+ S++ FS + L + S D +++W G EKT GH + VA S
Sbjct: 766 LQKILKGHSHECSTMAFSSDSRQLVTGSVDCTVRLWNTTTGDLEKTFVGHTGTVLSVAIS 825
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
SD R +VSGS + +K+W+ ++G LKTL S + F+P S I +G D + IW
Sbjct: 826 SDGRQIVSGSIE-AVKLWDAATGDLLKTLA--SGFAGSVAFSPDSRQIAAGFKDGKIFIW 882
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 198
D G KTL H + ++ F+ D +V+ S D + WD G + + +
Sbjct: 883 DA-AGTLQKTLERHPGAIMSIAFSPDVKQLVTCSTDSTIKRWDITIGGVQEAV--GHSKH 939
Query: 199 VSFVKFSPNGKYILAATLDNTLKLWDS 225
V+ + SP+GK I + + D T+KLWD+
Sbjct: 940 VTTMVLSPDGKVIASGSADKTIKLWDA 966
Score = 270 (100.1 bits), Expect = 2.1e-26, Sum P(2) = 2.1e-26
Identities = 62/173 (35%), Positives = 96/173 (55%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L+ TL H A+ S+ FSP+ + L + S D IK W G ++ + GH ++ + S
Sbjct: 888 LQKTLERHPGAIMSIAFSPDVKQLVTCSTDSTIKRWDITIGGVQEAV-GHSKHVTTMVLS 946
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
D +++ SGS DKT+K+W+ ++G KTL GH + V F+ + IVS S E+V+IW
Sbjct: 947 PDGKVIASGSADKTIKLWDAATGDLQKTLTGHLDTVEKVVFSLDNRQIVSCS-SEAVKIW 1005
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 191
D TGK + + D + V + DG I S +G ++WD A+G LKT+
Sbjct: 1006 DAATGKVQNSFES-DDVFTIVAVSPDGKHIASGHCNGRIKLWDMATGSLLKTM 1057
Score = 267 (99.0 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 65/175 (37%), Positives = 96/175 (54%)
Query: 51 IKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGH 110
I ++ G +K + GH S +A+SSDSR LV+GS D T+++W ++G KT GH
Sbjct: 756 IMLFDTATGDLQKILKGHSHECSTMAFSSDSRQLVTGSVDCTVRLWNTTTGDLEKTFVGH 815
Query: 111 SNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVS 170
+ V + IVSGS E+V++WD TG LKTL S +V F+ D I +
Sbjct: 816 TGTVLSVAISSDGRQIVSGSI-EAVKLWDAATGDLLKTLA--SGFAGSVAFSPDSRQIAA 872
Query: 171 SSYDGLCRIWDTASGQCLKTLIDDDNP-PVSFVKFSPNGKYILAATLDNTLKLWD 224
DG IWD A+G KTL + +P + + FSP+ K ++ + D+T+K WD
Sbjct: 873 GFKDGKIFIWD-AAGTLQKTL--ERHPGAIMSIAFSPDVKQLVTCSTDSTIKRWD 924
Score = 225 (84.3 bits), Expect = 7.8e-24, Sum P(2) = 7.8e-24
Identities = 45/128 (35%), Positives = 76/128 (59%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLL 84
GH+K V+++ SP+G+ +AS SADK IK+W A G +KT++GH + V +S D+R +
Sbjct: 935 GHSKHVTTMVLSPDGKVIASGSADKTIKLWDAATGDLQKTLTGHLDTVEKVVFSLDNRQI 994
Query: 85 VSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK 144
VS S + +KIW+ ++GK + + + +P I SG + +++WD+ TG
Sbjct: 995 VSCSSE-AVKIWDAATGKVQNSFESDDVFTIVA-VSPDGKHIASGHCNGRIKLWDMATGS 1052
Query: 145 CLKTLPAH 152
LKT+ +
Sbjct: 1053 LLKTMAGY 1060
Score = 215 (80.7 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 54/158 (34%), Positives = 86/158 (54%)
Query: 71 GISDVAWSSDSRLLVS-G-SDDKT-LKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 127
G+ A+S+D + + + G S D T + +++ ++G K LKGHS+ F+ S +V
Sbjct: 731 GLHAGAFSADCKQIAAFGWSRDSTCIMLFDTATGDLQKILKGHSHECSTMAFSSDSRQLV 790
Query: 128 SGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC 187
+GS D +VR+W+ TG KT H+ V +V + DG IVS S + + ++WD A+G
Sbjct: 791 TGSVDCTVRLWNTTTGDLEKTFVGHTGTVLSVAISSDGRQIVSGSIEAV-KLWDAATGDL 849
Query: 188 LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225
LKTL V FSP+ + I A D + +WD+
Sbjct: 850 LKTLASGF---AGSVAFSPDSRQIAAGFKDGKIFIWDA 884
Score = 153 (58.9 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 42/129 (32%), Positives = 63/129 (48%)
Query: 31 SSVKFSPNGEWLASSSADKLIKIWGAYDGKFE-------KTISGHKLGISDVAWSSDSRL 83
S++ FSP + + K + +W E +T++GH + VA+S D +
Sbjct: 576 SAIIFSPESSVVKGENLHK-VPVWLGRAPPMEDSWTPMIQTLTGHSEAVWRVAFSPDGKQ 634
Query: 84 LVSGSDDKTLKIWELSSGKCLKTLKG-HSN--Y------VFCCNFNPQSNLIVSGSFDES 134
+ SGSD +K+W+ ++G KTL G H Y V F P S LI+SG +D S
Sbjct: 635 IASGSDSGLIKLWDTTTGSLQKTLSGSHPKRRYQIQQEQVKAMAFLPDSKLIISGYYDGS 694
Query: 135 VRIWDVRTG 143
V +WD TG
Sbjct: 695 VMLWDTTTG 703
Score = 146 (56.5 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 33/89 (37%), Positives = 54/89 (60%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG-H--------KLGI 72
TL GH++AV V FSP+G+ +AS S LIK+W G +KT+SG H + +
Sbjct: 615 TLTGHSEAVWRVAFSPDGKQIASGSDSGLIKLWDTTTGSLQKTLSGSHPKRRYQIQQEQV 674
Query: 73 SDVAWSSDSRLLVSGSDDKTLKIWELSSG 101
+A+ DS+L++SG D ++ +W+ ++G
Sbjct: 675 KAMAFLPDSKLIISGYYDGSVMLWDTTTG 703
Score = 146 (56.5 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 46/140 (32%), Positives = 67/140 (47%)
Query: 64 TISGHKLGI--SDVAWSSDSRLLVSGSDDKTLKIW-------ELSSGKCLKTLKGHSNYV 114
T+S L I S + +S +S + V G + + +W E S ++TL GHS V
Sbjct: 565 TLSHWPLQIYSSAIIFSPESSV-VKGENLHKVPVWLGRAPPMEDSWTPMIQTLTGHSEAV 623
Query: 115 FCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLP-AH--------SDPVSAVHFNRDG 165
+ F+P I SGS +++WD TG KTL +H + V A+ F D
Sbjct: 624 WRVAFSPDGKQIASGSDSGLIKLWDTTTGSLQKTLSGSHPKRRYQIQQEQVKAMAFLPDS 683
Query: 166 SLIVSSSYDGLCRIWDTASG 185
LI+S YDG +WDT +G
Sbjct: 684 KLIISGYYDGSVMLWDTTTG 703
Score = 133 (51.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 38/122 (31%), Positives = 57/122 (46%)
Query: 119 FNPQSNLIVSGSFDESVRIWDVRTGKC-------LKTLPAHSDPVSAVHFNRDGSLIVSS 171
F+P+S+ +V G V +W R ++TL HS+ V V F+ DG I S
Sbjct: 580 FSPESS-VVKGENLHKVPVWLGRAPPMEDSWTPMIQTLTGHSEAVWRVAFSPDGKQIASG 638
Query: 172 SYDGLCRIWDTASGQCLKTLIDD--------DNPPVSFVKFSPNGKYILAATLDNTLKLW 223
S GL ++WDT +G KTL V + F P+ K I++ D ++ LW
Sbjct: 639 SDSGLIKLWDTTTGSLQKTLSGSHPKRRYQIQQEQVKAMAFLPDSKLIISGYYDGSVMLW 698
Query: 224 DS 225
D+
Sbjct: 699 DT 700
Score = 109 (43.4 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 27/77 (35%), Positives = 40/77 (51%)
Query: 119 FNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSD-------------P--VSAVHFNR 163
F+P + LI+S S D ++++WD TG K LP HSD P + +V F+
Sbjct: 1091 FSPDAKLILSTSTDRAIKLWDAATGDLQKRLPCHSDSIITDAFSRSSGYPNWIFSVAFSS 1150
Query: 164 DGSLIVSSSYDGLCRIW 180
DG I ++S D R+W
Sbjct: 1151 DGQHIAAASADKTIRVW 1167
Score = 91 (37.1 bits), Expect = 7.8e-24, Sum P(2) = 7.8e-24
Identities = 27/82 (32%), Positives = 43/82 (52%)
Query: 156 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL-------IDD------DNPPVSF- 201
++ + F+ D LI+S+S D ++WD A+G K L I D P F
Sbjct: 1086 ITGLVFSPDAKLILSTSTDRAIKLWDAATGDLQKRLPCHSDSIITDAFSRSSGYPNWIFS 1145
Query: 202 VKFSPNGKYILAATLDNTLKLW 223
V FS +G++I AA+ D T+++W
Sbjct: 1146 VAFSSDGQHIAAASADKTIRVW 1167
Score = 70 (29.7 bits), Expect = 2.1e-26, Sum P(2) = 2.1e-26
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 196 NPPVSFVKFSPNGKYILAATLDNTLKLWDS 225
N ++ + FSP+ K IL+ + D +KLWD+
Sbjct: 1083 NTQITGLVFSPDAKLILSTSTDRAIKLWDA 1112
>RGD|1311332 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004402
"histone acetyltransferase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0015629 "actin cytoskeleton"
evidence=IEA;ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0046983 "protein dimerization
activity" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 RGD:1311332 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212 GO:GO:0006367
GO:GO:0004402 GO:GO:0005669 EMBL:CH473986 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
OrthoDB:EOG469QW7 IPI:IPI00361559 RefSeq:NP_001099835.1
UniGene:Rn.144813 Ensembl:ENSRNOT00000027482 GeneID:294018
KEGG:rno:294018 UCSC:RGD:1311332 NextBio:637428 Uniprot:D3ZH66
Length = 798
Score = 311 (114.5 bits), Expect = 9.2e-27, P = 9.2e-27
Identities = 61/203 (30%), Positives = 102/203 (50%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
L GH+ V FSP+ +L SSS D +++W GH + D +S
Sbjct: 537 LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGY 596
Query: 83 LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 142
VSG D+ ++W + L+ GH V C F+P SN + +GS D +VR+WDV
Sbjct: 597 YFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLN 656
Query: 143 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 202
G C++ H P+ ++ F+ +G + + + DG +WD G + L V +
Sbjct: 657 GNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGEL-KGHTDTVCSL 715
Query: 203 KFSPNGKYILAATLDNTLKLWDS 225
+FS +G+ + + ++DNT++LWD+
Sbjct: 716 RFSRDGEILASGSMDNTVRLWDA 738
Score = 270 (100.1 bits), Expect = 2.3e-22, P = 2.3e-22
Identities = 51/192 (26%), Positives = 95/192 (49%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLL 84
GH V +FSP G + S D++ ++W + + +GH ++ + +S +
Sbjct: 581 GHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYV 640
Query: 85 VSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK 144
+GS D+T+++W++ +G C++ GH + F+P + +G+ D V +WD+ G
Sbjct: 641 ATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGL 700
Query: 145 CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG-QCLKTLIDDDNPPVSFVK 203
+ L H+D V ++ F+RDG ++ S S D R+WD + L+T DD +
Sbjct: 701 MVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAIKAFEDLET--DDFTTATGHIN 758
Query: 204 FSPNGKYILAAT 215
N + +L T
Sbjct: 759 LPENSQELLLGT 770
Score = 252 (93.8 bits), Expect = 2.0e-20, P = 2.0e-20
Identities = 55/197 (27%), Positives = 93/197 (47%)
Query: 28 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSG 87
K + SVK + + + S D L +I K + GH + ++S D L+S
Sbjct: 500 KKLRSVKQASDLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSS 559
Query: 88 SDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLK 147
S+D T+++W L + CL KGH+ V+ F+P VSG D R+W + L+
Sbjct: 560 SEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLR 619
Query: 148 TLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPN 207
H V+ F+ + + + + S D R+WD +G C++ + P+ + FSPN
Sbjct: 620 IFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVR-IFTGHKGPIHSLTFSPN 678
Query: 208 GKYILAATLDNTLKLWD 224
G+++ D + LWD
Sbjct: 679 GRFLATGATDGRVLLWD 695
Score = 234 (87.4 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 58/204 (28%), Positives = 99/204 (48%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 80
+T + +++V + + +A AD +++W +++ KL V +SD
Sbjct: 462 YTFLNAYQGLTAVDVTDDSSLIAGGFADSTVRVW---------SVTPKKL--RSVKQASD 510
Query: 81 SRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 140
L+ SDD +I + + LK L GHS V+ +F+P N ++S S D +VR+W +
Sbjct: 511 LSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSL 570
Query: 141 RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 200
+T CL H+ PV F+ G VS +D + R+W T Q L+ + V+
Sbjct: 571 QTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLR-IFAGHLADVN 629
Query: 201 FVKFSPNGKYILAATLDNTLKLWD 224
+F PN Y+ + D T++LWD
Sbjct: 630 CTRFHPNSNYVATGSADRTVRLWD 653
Score = 177 (67.4 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 56/179 (31%), Positives = 84/179 (46%)
Query: 71 GISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 130
G++ V + DS L+ G D T+++W ++ K L+++K S+ +LI S
Sbjct: 470 GLTAVDVTDDSSLIAGGFADSTVRVWSVTPKK-LRSVKQASDL----------SLIDKES 518
Query: 131 FDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 190
D RI D +T LK L HS PV F+ D + ++SSS DG R+W + CL
Sbjct: 519 DDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVG 578
Query: 191 LIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTPL---NLNYFYRN 246
N PV +FSP G Y ++ D +LW + P I + L N F+ N
Sbjct: 579 Y-KGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPN 636
>UNIPROTKB|Q15542 [details] [associations]
symbol:TAF5 "Transcription initiation factor TFIID subunit
5" species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003700
GO:GO:0046983 GO:GO:0044212 GO:GO:0006368 EMBL:AL591408
GO:GO:0006367 Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276
HOVERGEN:HBG050226 KO:K03130 CTD:6877 OMA:ERQNNQI EMBL:X95525
EMBL:U75309 EMBL:U80191 EMBL:AK223615 EMBL:AK291229 EMBL:BC052268
EMBL:BC136340 EMBL:BC136348 IPI:IPI00298925 IPI:IPI00298926
RefSeq:NP_008882.2 UniGene:Hs.96103 PDB:2NXP PDBsum:2NXP
ProteinModelPortal:Q15542 SMR:Q15542 DIP:DIP-28150N IntAct:Q15542
STRING:Q15542 PhosphoSite:Q15542 DMDM:78103206 PaxDb:Q15542
PRIDE:Q15542 Ensembl:ENST00000351396 Ensembl:ENST00000369839
GeneID:6877 KEGG:hsa:6877 UCSC:uc001kwv.3 UCSC:uc010qqq.2
GeneCards:GC10P105117 HGNC:HGNC:11539 HPA:HPA006195 HPA:HPA006474
MIM:601787 neXtProt:NX_Q15542 PharmGKB:PA36314 InParanoid:Q15542
OrthoDB:EOG469QW7 PhylomeDB:Q15542 EvolutionaryTrace:Q15542
GenomeRNAi:6877 NextBio:26855 Bgee:Q15542 CleanEx:HS_TAF5
Genevestigator:Q15542 GermOnline:ENSG00000148835 Uniprot:Q15542
Length = 800
Score = 311 (114.5 bits), Expect = 9.3e-27, P = 9.3e-27
Identities = 61/203 (30%), Positives = 102/203 (50%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
L GH+ V FSP+ +L SSS D +++W GH + D +S
Sbjct: 539 LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGY 598
Query: 83 LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 142
VSG D+ ++W + L+ GH V C F+P SN + +GS D +VR+WDV
Sbjct: 599 YFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLN 658
Query: 143 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 202
G C++ H P+ ++ F+ +G + + + DG +WD G + L V +
Sbjct: 659 GNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGEL-KGHTDTVCSL 717
Query: 203 KFSPNGKYILAATLDNTLKLWDS 225
+FS +G+ + + ++DNT++LWD+
Sbjct: 718 RFSRDGEILASGSMDNTVRLWDA 740
Score = 270 (100.1 bits), Expect = 2.3e-22, P = 2.3e-22
Identities = 51/192 (26%), Positives = 95/192 (49%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLL 84
GH V +FSP G + S D++ ++W + + +GH ++ + +S +
Sbjct: 583 GHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYV 642
Query: 85 VSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK 144
+GS D+T+++W++ +G C++ GH + F+P + +G+ D V +WD+ G
Sbjct: 643 ATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGL 702
Query: 145 CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG-QCLKTLIDDDNPPVSFVK 203
+ L H+D V ++ F+RDG ++ S S D R+WD + L+T DD +
Sbjct: 703 MVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAIKAFEDLET--DDFTTATGHIN 760
Query: 204 FSPNGKYILAAT 215
N + +L T
Sbjct: 761 LPENSQELLLGT 772
Score = 252 (93.8 bits), Expect = 2.0e-20, P = 2.0e-20
Identities = 55/197 (27%), Positives = 93/197 (47%)
Query: 28 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSG 87
K + SVK + + + S D L +I K + GH + ++S D L+S
Sbjct: 502 KKLRSVKQASDLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSS 561
Query: 88 SDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLK 147
S+D T+++W L + CL KGH+ V+ F+P VSG D R+W + L+
Sbjct: 562 SEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLR 621
Query: 148 TLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPN 207
H V+ F+ + + + + S D R+WD +G C++ + P+ + FSPN
Sbjct: 622 IFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVR-IFTGHKGPIHSLTFSPN 680
Query: 208 GKYILAATLDNTLKLWD 224
G+++ D + LWD
Sbjct: 681 GRFLATGATDGRVLLWD 697
Score = 234 (87.4 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 58/204 (28%), Positives = 99/204 (48%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 80
+T + +++V + + +A AD +++W +++ KL V +SD
Sbjct: 464 YTFLNAYQGLTAVDVTDDSSLIAGGFADSTVRVW---------SVTPKKL--RSVKQASD 512
Query: 81 SRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 140
L+ SDD +I + + LK L GHS V+ +F+P N ++S S D +VR+W +
Sbjct: 513 LSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSL 572
Query: 141 RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 200
+T CL H+ PV F+ G VS +D + R+W T Q L+ + V+
Sbjct: 573 QTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLR-IFAGHLADVN 631
Query: 201 FVKFSPNGKYILAATLDNTLKLWD 224
+F PN Y+ + D T++LWD
Sbjct: 632 CTRFHPNSNYVATGSADRTVRLWD 655
Score = 177 (67.4 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 56/179 (31%), Positives = 84/179 (46%)
Query: 71 GISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 130
G++ V + DS L+ G D T+++W ++ K L+++K S+ +LI S
Sbjct: 472 GLTAVDVTDDSSLIAGGFADSTVRVWSVTPKK-LRSVKQASDL----------SLIDKES 520
Query: 131 FDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 190
D RI D +T LK L HS PV F+ D + ++SSS DG R+W + CL
Sbjct: 521 DDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVG 580
Query: 191 LIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTPL---NLNYFYRN 246
N PV +FSP G Y ++ D +LW + P I + L N F+ N
Sbjct: 581 Y-KGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPN 638
>UNIPROTKB|E1BEN8 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377 KO:K03130
CTD:6877 OMA:ERQNNQI EMBL:DAAA02059036 IPI:IPI00698152
RefSeq:NP_001178407.1 UniGene:Bt.59287 ProteinModelPortal:E1BEN8
Ensembl:ENSBTAT00000012808 GeneID:516001 KEGG:bta:516001
NextBio:20872090 Uniprot:E1BEN8
Length = 800
Score = 311 (114.5 bits), Expect = 9.3e-27, P = 9.3e-27
Identities = 61/203 (30%), Positives = 102/203 (50%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
L GH+ V FSP+ +L SSS D +++W GH + D +S
Sbjct: 539 LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGY 598
Query: 83 LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 142
VSG D+ ++W + L+ GH V C F+P SN + +GS D +VR+WDV
Sbjct: 599 YFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLN 658
Query: 143 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 202
G C++ H P+ ++ F+ +G + + + DG +WD G + L V +
Sbjct: 659 GNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGEL-KGHTDTVCSL 717
Query: 203 KFSPNGKYILAATLDNTLKLWDS 225
+FS +G+ + + ++DNT++LWD+
Sbjct: 718 RFSRDGEILASGSMDNTVRLWDA 740
Score = 268 (99.4 bits), Expect = 3.8e-22, P = 3.8e-22
Identities = 50/192 (26%), Positives = 95/192 (49%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLL 84
GH V +FSP G + S D++ ++W + + +GH ++ + +S +
Sbjct: 583 GHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYV 642
Query: 85 VSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK 144
+GS D+T+++W++ +G C++ GH + F+P + +G+ D V +WD+ G
Sbjct: 643 ATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGL 702
Query: 145 CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG-QCLKTLIDDDNPPVSFVK 203
+ L H+D V ++ F+RDG ++ S S D R+WD + ++T DD +
Sbjct: 703 MVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVKAFEDVET--DDFTTATGHIN 760
Query: 204 FSPNGKYILAAT 215
N + +L T
Sbjct: 761 LPENSQELLLGT 772
Score = 252 (93.8 bits), Expect = 2.0e-20, P = 2.0e-20
Identities = 55/197 (27%), Positives = 93/197 (47%)
Query: 28 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSG 87
K + SVK + + + S D L +I K + GH + ++S D L+S
Sbjct: 502 KKLRSVKQAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSS 561
Query: 88 SDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLK 147
S+D T+++W L + CL KGH+ V+ F+P VSG D R+W + L+
Sbjct: 562 SEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLR 621
Query: 148 TLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPN 207
H V+ F+ + + + + S D R+WD +G C++ + P+ + FSPN
Sbjct: 622 IFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVR-IFTGHKGPIHSLTFSPN 680
Query: 208 GKYILAATLDNTLKLWD 224
G+++ D + LWD
Sbjct: 681 GRFLATGATDGRVLLWD 697
Score = 231 (86.4 bits), Expect = 3.6e-18, P = 3.6e-18
Identities = 57/204 (27%), Positives = 99/204 (48%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 80
+T + +++V + + +A AD +++W +++ KL V ++D
Sbjct: 464 YTFLNAYQGLTAVDVTDDSSLIAGGFADSTVRVW---------SVTPKKL--RSVKQAAD 512
Query: 81 SRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 140
L+ SDD +I + + LK L GHS V+ +F+P N ++S S D +VR+W +
Sbjct: 513 LSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSL 572
Query: 141 RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 200
+T CL H+ PV F+ G VS +D + R+W T Q L+ + V+
Sbjct: 573 QTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLR-IFAGHLADVN 631
Query: 201 FVKFSPNGKYILAATLDNTLKLWD 224
+F PN Y+ + D T++LWD
Sbjct: 632 CTRFHPNSNYVATGSADRTVRLWD 655
Score = 174 (66.3 bits), Expect = 4.5e-12, P = 4.5e-12
Identities = 55/179 (30%), Positives = 84/179 (46%)
Query: 71 GISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 130
G++ V + DS L+ G D T+++W ++ K L+++K ++ +LI S
Sbjct: 472 GLTAVDVTDDSSLIAGGFADSTVRVWSVTPKK-LRSVKQAADL----------SLIDKES 520
Query: 131 FDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 190
D RI D +T LK L HS PV F+ D + ++SSS DG R+W + CL
Sbjct: 521 DDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVG 580
Query: 191 LIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTPL---NLNYFYRN 246
N PV +FSP G Y ++ D +LW + P I + L N F+ N
Sbjct: 581 Y-KGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPN 638
>UNIPROTKB|E2RE41 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0033276 "transcription factor TFTC
complex" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
EMBL:AAEX03015497 RefSeq:XP_003433663.1 Ensembl:ENSCAFT00000016513
GeneID:100688981 KEGG:cfa:100688981 Uniprot:E2RE41
Length = 801
Score = 311 (114.5 bits), Expect = 9.3e-27, P = 9.3e-27
Identities = 61/203 (30%), Positives = 102/203 (50%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
L GH+ V FSP+ +L SSS D +++W GH + D +S
Sbjct: 540 LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGY 599
Query: 83 LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 142
VSG D+ ++W + L+ GH V C F+P SN + +GS D +VR+WDV
Sbjct: 600 YFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLN 659
Query: 143 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 202
G C++ H P+ ++ F+ +G + + + DG +WD G + L V +
Sbjct: 660 GNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGEL-KGHTDTVCSL 718
Query: 203 KFSPNGKYILAATLDNTLKLWDS 225
+FS +G+ + + ++DNT++LWD+
Sbjct: 719 RFSRDGEILASGSMDNTVRLWDA 741
Score = 271 (100.5 bits), Expect = 1.8e-22, P = 1.8e-22
Identities = 51/192 (26%), Positives = 95/192 (49%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLL 84
GH V +FSP G + S D++ ++W + + +GH ++ + +S +
Sbjct: 584 GHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYV 643
Query: 85 VSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK 144
+GS D+T+++W++ +G C++ GH + F+P + +G+ D V +WD+ G
Sbjct: 644 ATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGL 703
Query: 145 CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG-QCLKTLIDDDNPPVSFVK 203
+ L H+D V ++ F+RDG ++ S S D R+WD + L+T DD +
Sbjct: 704 MVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVKAFEDLET--DDFTTATGHIN 761
Query: 204 FSPNGKYILAAT 215
N + +L T
Sbjct: 762 LPENSQELLLGT 773
Score = 252 (93.8 bits), Expect = 2.0e-20, P = 2.0e-20
Identities = 55/197 (27%), Positives = 93/197 (47%)
Query: 28 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSG 87
K + SVK + + + S D L +I K + GH + ++S D L+S
Sbjct: 503 KKLRSVKQAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSS 562
Query: 88 SDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLK 147
S+D T+++W L + CL KGH+ V+ F+P VSG D R+W + L+
Sbjct: 563 SEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLR 622
Query: 148 TLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPN 207
H V+ F+ + + + + S D R+WD +G C++ + P+ + FSPN
Sbjct: 623 IFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVR-IFTGHKGPIHSLTFSPN 681
Query: 208 GKYILAATLDNTLKLWD 224
G+++ D + LWD
Sbjct: 682 GRFLATGATDGRVLLWD 698
Score = 231 (86.4 bits), Expect = 3.6e-18, P = 3.6e-18
Identities = 57/204 (27%), Positives = 99/204 (48%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 80
+T + +++V + + +A AD +++W +++ KL V ++D
Sbjct: 465 YTFLNAYQGLTAVDVTDDSSLIAGGFADSTVRVW---------SVTPKKL--RSVKQAAD 513
Query: 81 SRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 140
L+ SDD +I + + LK L GHS V+ +F+P N ++S S D +VR+W +
Sbjct: 514 LSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSL 573
Query: 141 RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 200
+T CL H+ PV F+ G VS +D + R+W T Q L+ + V+
Sbjct: 574 QTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLR-IFAGHLADVN 632
Query: 201 FVKFSPNGKYILAATLDNTLKLWD 224
+F PN Y+ + D T++LWD
Sbjct: 633 CTRFHPNSNYVATGSADRTVRLWD 656
Score = 174 (66.3 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 55/179 (30%), Positives = 84/179 (46%)
Query: 71 GISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 130
G++ V + DS L+ G D T+++W ++ K L+++K ++ +LI S
Sbjct: 473 GLTAVDVTDDSSLIAGGFADSTVRVWSVTPKK-LRSVKQAADL----------SLIDKES 521
Query: 131 FDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 190
D RI D +T LK L HS PV F+ D + ++SSS DG R+W + CL
Sbjct: 522 DDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVG 581
Query: 191 LIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTPL---NLNYFYRN 246
N PV +FSP G Y ++ D +LW + P I + L N F+ N
Sbjct: 582 Y-KGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPN 639
>MGI|MGI:2144041 [details] [associations]
symbol:Wsb2 "WD repeat and SOCS box-containing 2"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0035556
"intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 MGI:MGI:2144041
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0035556 EMBL:CH466529 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 HOGENOM:HOG000063727
HOVERGEN:HBG034543 CTD:55884 KO:K10342 OrthoDB:EOG45DWPC
EMBL:AF033188 EMBL:AF072881 EMBL:AK157999 EMBL:BC055100
IPI:IPI00556687 RefSeq:NP_067514.2 UniGene:Mm.28489
ProteinModelPortal:O54929 SMR:O54929 STRING:O54929
PhosphoSite:O54929 PRIDE:O54929 Ensembl:ENSMUST00000031309
GeneID:59043 KEGG:mmu:59043 NextBio:314658 Bgee:O54929
CleanEx:MM_WSB2 Genevestigator:O54929 GermOnline:ENSMUSG00000029364
Uniprot:O54929
Length = 404
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 66/202 (32%), Positives = 116/202 (57%)
Query: 42 LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS-SDSRLLVSGSDDKTLKIWELSS 100
LA+ D IKIW G +SGH+ + D++++ S S +LVS S DKTL+IW+L+
Sbjct: 126 LATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNK 185
Query: 101 -GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAV 159
GK ++ L GH +V+CC+ +P +++ S + ++SV +W +R+ ++ L H V +
Sbjct: 186 HGKQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSC 245
Query: 160 HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL--------IDDDNPPVSFVK---FSPNG 208
F+ D +L+V++SYD +WD +G+ L++L +DD + +S ++ FSP G
Sbjct: 246 DFSPDSALLVTASYDTSVIMWDPYTGERLRSLHHTQLEPTMDDSDVHMSSLRSVCFSPEG 305
Query: 209 KYILAATLDNTLKLWDSKVVTP 230
Y+ D L++W ++ P
Sbjct: 306 LYLATVADDRLLRIWALELKAP 327
Score = 241 (89.9 bits), Expect = 4.9e-20, P = 4.9e-20
Identities = 70/239 (29%), Positives = 119/239 (49%)
Query: 18 VLKFTLAGHTKAVSSVKFSPNGEW-LASSSADKLIKIWGAYD-GKFEKTISGHKLGISDV 75
+L L+GH V + F+P+G L S+S DK ++IW GK + +SGH +
Sbjct: 144 LLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQWVYCC 203
Query: 76 AWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 135
+ S D +L S + +K++ +W + S ++ L+GH + V C+F+P S L+V+ S+D SV
Sbjct: 204 SISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPDSALLVTASYDTSV 263
Query: 136 RIWDVRTGKCLKTL------PA------HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA 183
+WD TG+ L++L P H + +V F+ +G + + + D L RIW
Sbjct: 264 IMWDPYTGERLRSLHHTQLEPTMDDSDVHMSSLRSVCFSPEGLYLATVADDRLLRIWALE 323
Query: 184 SGQCLKTLIDDDNPPVSFV--KFSPNGKYILAATLDNTLKLWDSKVVTPAI--ICSTPL 238
LK + P + + F P+G I T D ++ W + V ++ +C L
Sbjct: 324 ----LKAPVAFA-PMTNGLCCTFFPHGGIIATGTRDGHVQFWTAPRVLSSLKHLCRKAL 377
Score = 147 (56.8 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 57/208 (27%), Positives = 89/208 (42%)
Query: 32 SVKFSPNGEWLASSSADKLIKI--WGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGS- 88
SV FSP+G W A S ++K+ W + K G + SS + GS
Sbjct: 31 SVAFSPDGSWFAWSQGHCVVKLVPWPLEEQFIPK-------GFEAKSRSSKNDPKGRGSL 83
Query: 89 DDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSN-----LIVSGSFDESVRIWDVRTG 143
+KTL ++ G + +PQ+ ++ +G D ++IW+V+TG
Sbjct: 84 KEKTLDCGQIVWGLAFSPWPSPPSRKLWARHHPQAPDVSCLILATGLNDGQIKIWEVQTG 143
Query: 144 KCLKTLPAHSDPVSAVHFNRDGSLI-VSSSYDGLCRIWD-TASGQCLKTLIDDDNPPVSF 201
L L H D V + F GSLI VS+S D RIWD G+ ++ L V
Sbjct: 144 LLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVL-SGHLQWVYC 202
Query: 202 VKFSPNGKYILAATLDNTLKLWDSKVVT 229
SP+ + +A + ++ LW + T
Sbjct: 203 CSISPDCSMLCSAAGEKSVFLWSMRSYT 230
Score = 137 (53.3 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 43/146 (29%), Positives = 64/146 (43%)
Query: 17 YVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK---------FEKTISG 67
Y L L GH +V S FSP+ L ++S D + +W Y G+ E T+
Sbjct: 229 YTLIRKLEGHQSSVVSCDFSPDSALLVTASYDTSVIMWDPYTGERLRSLHHTQLEPTMDD 288
Query: 68 ---HKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSN 124
H + V +S + L + +DD+ L+IW L K +N + CC F P
Sbjct: 289 SDVHMSSLRSVCFSPEGLYLATVADDRLLRIWALEL-KAPVAFAPMTNGL-CCTFFPHGG 346
Query: 125 LIVSGSFDESVRIWDV-RTGKCLKTL 149
+I +G+ D V+ W R LK L
Sbjct: 347 IIATGTRDGHVQFWTAPRVLSSLKHL 372
>UNIPROTKB|E2RR78 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:AAEX03002720
Ensembl:ENSCAFT00000019257 NextBio:20862231 Uniprot:E2RR78
Length = 607
Score = 308 (113.5 bits), Expect = 9.6e-27, P = 9.6e-27
Identities = 71/218 (32%), Positives = 110/218 (50%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI--SGHKLGISDVAWSSD 80
L GH V S +F + L S S D I+ W G F T+ GH + D+ S
Sbjct: 356 LRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDL--GSFTNTVLYQGHAYPVWDLDISPY 413
Query: 81 SRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 140
S SGS D+T ++W L+ GH V C F+P SN + +GS D++VR+W
Sbjct: 414 SLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSA 473
Query: 141 RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD-DNPPV 199
+ G ++ H PV ++ F+ +G + S+ D ++WD ASG K L DN +
Sbjct: 474 QQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDN--I 531
Query: 200 SFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTP 237
+ + FSP+ I +A++DN++++WD + CSTP
Sbjct: 532 TSLTFSPDSSLIASASMDNSVRVWDIRNT----YCSTP 565
Score = 279 (103.3 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 51/129 (39%), Positives = 78/129 (60%)
Query: 17 YVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA 76
Y L+ AGH V VKF PN +LA+ S DK +++W A G + +GH+ + +A
Sbjct: 435 YPLRI-YAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLA 493
Query: 77 WSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 136
+S + + L S +D+ LK+W+L+SG K L+GH++ + F+P S+LI S S D SVR
Sbjct: 494 FSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVR 553
Query: 137 IWDVRTGKC 145
+WD+R C
Sbjct: 554 VWDIRNTYC 562
Score = 217 (81.4 bits), Expect = 7.0e-17, P = 7.0e-17
Identities = 50/162 (30%), Positives = 79/162 (48%)
Query: 63 KTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQ 122
K + GH + + +DS L+S S+D +++ W+L S +GH+ V+ + +P
Sbjct: 354 KILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPY 413
Query: 123 SNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 182
S SGS D + R+W L+ H V V F+ + + + + S D R+W
Sbjct: 414 SLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSA 473
Query: 183 ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
G ++ L PV + FSPNGKY+ +A D LKLWD
Sbjct: 474 QQGNSVR-LFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWD 514
Score = 170 (64.9 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 48/197 (24%), Positives = 91/197 (46%)
Query: 30 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSD 89
+++ + SP+ + LA+ + IK+W K + H++ +S + + D ++ D
Sbjct: 289 LNTAEISPDSKLLAAGFDNSCIKLWSLRSKKLKS--EPHQVDVSRIHLACD---ILEEED 343
Query: 90 DKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTL 149
D+ + ++G +K L+GH V+ F S+ ++S S D S+R WD+ +
Sbjct: 344 DE-----DDNAGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLY 398
Query: 150 PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK 209
H+ PV + + S S+D R+W L+ + V VKF PN
Sbjct: 399 QGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLR-IYAGHLADVDCVKFHPNSN 457
Query: 210 YILAATLDNTLKLWDSK 226
Y+ + D T++LW ++
Sbjct: 458 YLATGSTDKTVRLWSAQ 474
Score = 166 (63.5 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 33/102 (32%), Positives = 55/102 (53%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLL 84
GH V S+ FSPNG++LAS+ D+ +K+W G K + GH I+ + +S DS L+
Sbjct: 484 GHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLI 543
Query: 85 VSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLI 126
S S D ++++W++ + C G S + SN++
Sbjct: 544 ASASMDNSVRVWDIRNTYCSTPADGSSGELVGVYTGQMSNVL 585
>RGD|1309121 [details] [associations]
symbol:Fbxw11 "F-box and WD repeat domain containing 11"
species:10116 "Rattus norvegicus" [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006470
"protein dephosphorylation" evidence=ISO] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=ISO] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0031648 "protein destabilization" evidence=ISO] [GO:0042347
"negative regulation of NF-kappaB import into nucleus"
evidence=ISO] [GO:0042753 "positive regulation of circadian rhythm"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045862 "positive regulation
of proteolysis" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 RGD:1309121 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 IPI:IPI00368750 Ensembl:ENSRNOT00000005874
UCSC:RGD:1309121 ArrayExpress:F1M7I4 Uniprot:F1M7I4
Length = 493
Score = 304 (112.1 bits), Expect = 1.1e-26, P = 1.1e-26
Identities = 72/222 (32%), Positives = 121/222 (54%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW---GAYDGKFEKTISGHKLGISDVAWS 78
TL H +AV ++FS NG + + S D+ I +W A D + + GH+ ++ V +
Sbjct: 266 TLIHHNEAVLHLRFS-NG-LMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF- 322
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
D + +VS S D+T+K+W S+ + ++TL GH + C + + L+VSGS D ++R+W
Sbjct: 323 -DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLW 379
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT---------ASGQCLK 189
D+ G CL+ L H + V + F D IVS +YDG ++WD AS CL+
Sbjct: 380 DIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLR 437
Query: 190 TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPA 231
TL++ V ++F I++++ D+T+ +WD V P+
Sbjct: 438 TLVEHSGR-VFRLQFDEF--QIISSSHDDTILIWDFLNVPPS 476
Score = 289 (106.8 bits), Expect = 5.3e-25, P = 5.3e-25
Identities = 63/172 (36%), Positives = 100/172 (58%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L+ L GH AV+ V F + +++ S+S D+ IK+W +F +T++GHK GI+ + +
Sbjct: 306 LRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR 363
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
RL+VSGS D T+++W++ G CL+ L+GH V C F+ + IVSG++D +++W
Sbjct: 364 D--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVW 419
Query: 139 DVRTGK---------CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181
D++ CL+TL HS V + F D I+SSS+D IWD
Sbjct: 420 DLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIWD 469
Score = 250 (93.1 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 55/148 (37%), Positives = 87/148 (58%)
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
D ++SG D ++KIW+ SS +CLK L GH+ V C ++ + +IV+GS D +VR+WD
Sbjct: 200 DDDKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYDER--VIVTGSSDSTVRVWD 257
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ--CLKTLIDDDNP 197
V TG+ L TL H++ V +H L+V+ S D +WD AS L+ ++
Sbjct: 258 VNTGEVLNTLIHHNEAV--LHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRA 315
Query: 198 PVSFVKFSPNGKYILAATLDNTLKLWDS 225
V+ V F + KYI++A+ D T+K+W +
Sbjct: 316 AVNVVDF--DDKYIVSASGDRTIKVWST 341
Score = 230 (86.0 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 58/218 (26%), Positives = 112/218 (51%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
L GHT +V +++ + + S+D +++W G+ T+ H + + +S+
Sbjct: 227 LTGHTGSVLCLQYDERV--IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG-- 282
Query: 83 LLVSGSDDKTLKIWELSSGKCL---KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
L+V+ S D+++ +W+++S + + L GH V +F+ + IVS S D ++++W
Sbjct: 283 LMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIKVWS 340
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
T + ++TL H ++ + + RD L+VS S D R+WD G CL+ L + V
Sbjct: 341 TSTCEFVRTLNGHKRGIACLQY-RD-RLVVSGSSDNTIRLWDIECGACLRVL-EGHEELV 397
Query: 200 SFVKFSPNGKYILAATLDNTLKLWDSKV-VTPAIICST 236
++F + K I++ D +K+WD + + P ST
Sbjct: 398 RCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPAST 433
Score = 223 (83.6 bits), Expect = 9.8e-18, P = 9.8e-18
Identities = 56/202 (27%), Positives = 112/202 (55%)
Query: 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV 85
++K V +++ + + + S D IKIW + K ++GH G S + D R++V
Sbjct: 190 NSKGVYCLQY--DDDKIISGLRDNSIKIWDKSSLECLKVLTGHT-G-SVLCLQYDERVIV 245
Query: 86 SGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 145
+GS D T+++W++++G+ L TL H+ V F+ + L+V+ S D S+ +WD+ +
Sbjct: 246 TGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKDRSIAVWDMASATD 303
Query: 146 L---KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 202
+ + L H V+ V F D IVS+S D ++W T++ + ++TL + ++ +
Sbjct: 304 ITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTL-NGHKRGIACL 360
Query: 203 KFSPNGKYILAATLDNTLKLWD 224
++ + +++ + DNT++LWD
Sbjct: 361 QY--RDRLVVSGSSDNTIRLWD 380
>ZFIN|ZDB-GENE-040426-1851 [details] [associations]
symbol:wdr61 "WD repeat domain 61" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016593 "Cdc73/Paf1 complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0055087 "Ski
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1851 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0032968 GO:GO:0016593 GO:GO:0055087 CTD:80349
HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW EMBL:BC062834
IPI:IPI00484493 RefSeq:NP_957147.1 UniGene:Dr.122500
ProteinModelPortal:Q6P5M2 STRING:Q6P5M2 PRIDE:Q6P5M2 DNASU:393827
GeneID:393827 KEGG:dre:393827 NextBio:20814815 Uniprot:Q6P5M2
Length = 305
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 67/207 (32%), Positives = 113/207 (54%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L++TL GH V SV S NG ASSS D I++W GK K++ + VA+S
Sbjct: 56 LQWTLEGHQLGVVSVNISQNGAIAASSSLDAHIRLWDLETGKQIKSMDAGPVDAWTVAFS 115
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
DS+ + +GS + I+ + SGK +L ++ ++P + SG+ D + I+
Sbjct: 116 PDSKYIATGSHLGKVNIFGVESGKKEHSLDTRGKFILSIAYSPDGKYLASGAIDGIINIF 175
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 198
D+ TGK L TL H+ P+ ++ F+ D L+V++S DG +I+D TL +
Sbjct: 176 DIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWV 235
Query: 199 VSFVKFSPNGKYILAATLDNTLKLWDS 225
+S V FSP+ + ++++ D ++K+WD+
Sbjct: 236 LS-VAFSPDDTHFVSSSSDKSIKVWDT 261
Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 65/193 (33%), Positives = 110/193 (56%)
Query: 32 SVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDK 91
+V FSP+ +++A+ S + I+G GK E ++ I +A+S D + L SG+ D
Sbjct: 111 TVAFSPDSKYIATGSHLGKVNIFGVESGKKEHSLDTRGKFILSIAYSPDGKYLASGAIDG 170
Query: 92 TLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPA 151
+ I+++++GK L TL+GH+ + F+P S L+V+ S D ++I+DV+ TL
Sbjct: 171 IINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSG 230
Query: 152 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 211
H V +V F+ D + VSSS D ++WDT+S C+ T D + S VK++P G I
Sbjct: 231 HGSWVLSVAFSPDDTHFVSSSSDKSIKVWDTSSRSCVNTFFDHQDQVWS-VKYNPTGSKI 289
Query: 212 LAATLDNTLKLWD 224
++A D + ++D
Sbjct: 290 VSAGDDRAIHIYD 302
Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 57/154 (37%), Positives = 89/154 (57%)
Query: 28 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSG 87
K + S+ +SP+G++LAS + D +I I+ GK T+ GH + I + +S DS+LLV+
Sbjct: 149 KFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTA 208
Query: 88 SDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLK 147
SDD +KI+++ TL GH ++V F+P VS S D+S+++WD + C+
Sbjct: 209 SDDGYIKIYDVQHANLAGTLSGHGSWVLSVAFSPDDTHFVSSSSDKSIKVWDTSSRSCVN 268
Query: 148 TLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181
T H D V +V +N GS IVS+ D I+D
Sbjct: 269 TFFDHQDQVWSVKYNPTGSKIVSAGDDRAIHIYD 302
Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 56/187 (29%), Positives = 101/187 (54%)
Query: 40 EWLASSSADKLIKIWGAYDGKFEK--TISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWE 97
E + + S D L+K+W D K E T+ GH+LG+ V S + + S S D +++W+
Sbjct: 33 ETIVTGSLDDLVKVWKWSDEKLELQWTLEGHQLGVVSVNISQNGAIAASSSLDAHIRLWD 92
Query: 98 LSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVS 157
L +GK +K++ + F+P S I +GS V I+ V +GK +L +
Sbjct: 93 LETGKQIKSMDAGPVDAWTVAFSPDSKYIATGSHLGKVNIFGVESGKKEHSLDTRGKFIL 152
Query: 158 AVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD 217
++ ++ DG + S + DG+ I+D A+G+ L TL + P+ + FSP+ + ++ A+ D
Sbjct: 153 SIAYSPDGKYLASGAIDGIINIFDIATGKLLHTL-EGHAMPIRSLTFSPDSQLLVTASDD 211
Query: 218 NTLKLWD 224
+K++D
Sbjct: 212 GYIKIYD 218
Score = 218 (81.8 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 44/121 (36%), Positives = 66/121 (54%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L TL GH + S+ FSP+ + L ++S D IKI+ T+SGH + VA+S
Sbjct: 182 LLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLSVAFS 241
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
D VS S DK++K+W+ SS C+ T H + V+ +NP + IVS D ++ I+
Sbjct: 242 PDDTHFVSSSSDKSIKVWDTSSRSCVNTFFDHQDQVWSVKYNPTGSKIVSAGDDRAIHIY 301
Query: 139 D 139
D
Sbjct: 302 D 302
Score = 195 (73.7 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 52/165 (31%), Positives = 84/165 (50%)
Query: 68 HKLGISDVAWSSD----SRLLVSGSDDKTLKIWELSSGKC-LK-TLKGHSNYVFCCNFNP 121
H+ I AW S +V+GS D +K+W+ S K L+ TL+GH V N +
Sbjct: 15 HEDAIWTAAWGRSEKDGSETIVTGSLDDLVKVWKWSDEKLELQWTLEGHQLGVVSVNISQ 74
Query: 122 QSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSA--VHFNRDGSLIVSSSYDGLCRI 179
+ S S D +R+WD+ TGK +K++ A PV A V F+ D I + S+ G I
Sbjct: 75 NGAIAASSSLDAHIRLWDLETGKQIKSMDA--GPVDAWTVAFSPDSKYIATGSHLGKVNI 132
Query: 180 WDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
+ SG+ +L D + + +SP+GKY+ + +D + ++D
Sbjct: 133 FGVESGKKEHSL-DTRGKFILSIAYSPDGKYLASGAIDGIINIFD 176
>RGD|1306947 [details] [associations]
symbol:Wdr83 "WD repeat domain 83" species:10116 "Rattus
norvegicus" [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=IEA;ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0005681 "spliceosomal complex"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1306947 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0071013
GO:GO:0000375 CTD:84292 HOVERGEN:HBG105288 KO:K13124
OrthoDB:EOG4ZCT4V EMBL:AY940050 IPI:IPI00209921
RefSeq:NP_001041312.1 UniGene:Rn.3570 ProteinModelPortal:Q5BLX8
PRIDE:Q5BLX8 GeneID:288924 KEGG:rno:288924 InParanoid:Q5BLX8
NextBio:629000 Genevestigator:Q5BLX8 Uniprot:Q5BLX8
Length = 315
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 68/198 (34%), Positives = 113/198 (57%)
Query: 29 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGS 88
AV +V+F+ +G + + +DK +K+W G +T SGH + D A S D+ L SG
Sbjct: 27 AVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSFDNSHLCSGG 86
Query: 89 DDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC--L 146
DKT+ +W++++G+ ++ +GH+ V FN ++ +I+SGS D SVR WD R+ K +
Sbjct: 87 GDKTVVLWDVATGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSVRCWDCRSRKPEPV 146
Query: 147 KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP 206
+TL D +S+V + D I++ S DG R +D GQ + P++ FS
Sbjct: 147 QTLDEARDGISSVKVS-DHE-ILAGSVDGRVRRYDLRMGQVTSDYVGS---PITCTCFSR 201
Query: 207 NGKYILAATLDNTLKLWD 224
+G+ L ++LD+TL+L D
Sbjct: 202 DGQCTLISSLDSTLRLLD 219
Score = 207 (77.9 bits), Expect = 8.7e-17, P = 8.7e-17
Identities = 56/188 (29%), Positives = 97/188 (51%)
Query: 63 KTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQ 122
KT+ + + V ++ D ++ DKTLK+W G L+T GH V +
Sbjct: 19 KTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSFD 78
Query: 123 SNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 182
++ + SG D++V +WDV TG+ ++ H+ V+ V FN + ++I+S S D R WD
Sbjct: 79 NSHLCSGGGDKTVVLWDVATGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSVRCWDC 138
Query: 183 ASG--QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKV--VTPAIICSTPL 238
S + ++TL D+ +S VK S + ILA ++D ++ +D ++ VT + S P+
Sbjct: 139 RSRKPEPVQTL-DEARDGISSVKVSDHE--ILAGSVDGRVRRYDLRMGQVTSDYVGS-PI 194
Query: 239 NLNYFYRN 246
F R+
Sbjct: 195 TCTCFSRD 202
Score = 183 (69.5 bits), Expect = 5.9e-14, P = 5.9e-14
Identities = 53/223 (23%), Positives = 101/223 (45%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
T +GH V S + L S DK + +W G+ + GH ++ V ++ ++
Sbjct: 62 TYSGHGYEVLDAAGSFDNSHLCSGGGDKTVVLWDVATGQVVRKFRGHAGKVNTVQFNEEA 121
Query: 82 RLLVSGSDDKTLKIWELSSGKC--LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
+++SGS D +++ W+ S K ++TL + + + I++GS D VR +D
Sbjct: 122 TVILSGSIDSSVRCWDCRSRKPEPVQTLDEARDGISSVKVSDHE--ILAGSVDGRVRRYD 179
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
+R G+ T P++ F+RDG + SS D R+ D +G+ L + N
Sbjct: 180 LRMGQV--TSDYVGSPITCTCFSRDGQCTLISSLDSTLRLLDKDTGELLGEYVGHKNQKY 237
Query: 200 SF-VKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTPLNLN 241
S ++++ + D + WD +V ++ + P+ N
Sbjct: 238 KLDCCLSERDTHVVSCSEDGKVFFWD--LVEGSLALALPVGSN 278
Score = 133 (51.9 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 34/129 (26%), Positives = 60/129 (46%)
Query: 102 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHF 161
K LKTL V FN N ++ D+++++W+ G L+T H V
Sbjct: 16 KQLKTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAG 75
Query: 162 NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLK 221
+ D S + S D +WD A+GQ ++ V+ V+F+ IL+ ++D++++
Sbjct: 76 SFDNSHLCSGGGDKTVVLWDVATGQVVRKFRGHAGK-VNTVQFNEEATVILSGSIDSSVR 134
Query: 222 LWDSKVVTP 230
WD + P
Sbjct: 135 CWDCRSRKP 143
Score = 113 (44.8 bits), Expect = 0.00030, P = 0.00030
Identities = 46/164 (28%), Positives = 75/164 (45%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG--ISDVAWSS 79
TL +SSVK S + E LA S D ++ YD + + S + +G I+ +S
Sbjct: 148 TLDEARDGISSVKVSDH-EILAGS-VDGRVR---RYDLRMGQVTSDY-VGSPITCTCFSR 201
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSN--YVFCCNFNPQSNLIVSGSFDESVRI 137
D + + S D TL++ + +G+ L GH N Y C + + +VS S D V
Sbjct: 202 DGQCTLISSLDSTLRLLDKDTGELLGEYVGHKNQKYKLDCCLSERDTHVVSCSEDGKVFF 261
Query: 138 WDVRTGKCLKTLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIW 180
WD+ G LP S+ V ++ ++ D L+ + G + W
Sbjct: 262 WDLVEGSLALALPVGSNVVQSLAYHPADPCLLTAMG--GSIQYW 303
>RGD|1359599 [details] [associations]
symbol:Wsb2 "WD repeat and SOCS box-containing 2" species:10116
"Rattus norvegicus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 RGD:1359599
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 HOGENOM:HOG000063727
HOVERGEN:HBG034543 CTD:55884 KO:K10342 OrthoDB:EOG45DWPC
EMBL:BC081901 IPI:IPI00371120 RefSeq:NP_001007617.1 UniGene:Rn.4063
Ensembl:ENSRNOT00000001499 GeneID:288692 KEGG:rno:288692
UCSC:RGD:1359599 InParanoid:Q66HE3 NextBio:628569
Genevestigator:Q66HE3 Uniprot:Q66HE3
Length = 404
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 65/202 (32%), Positives = 116/202 (57%)
Query: 42 LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD-SRLLVSGSDDKTLKIWELSS 100
LA+ D IKIW G +SGH+ + D++++ + S +LVS S DKTL+IW+L+
Sbjct: 126 LATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPNGSLILVSASRDKTLRIWDLNK 185
Query: 101 -GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAV 159
GK ++ L GH +V+CC+ +P +++ S + ++SV +W +R+ ++ L H V +
Sbjct: 186 HGKQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSC 245
Query: 160 HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL--------IDDDNPPVSFVK---FSPNG 208
F+ D +L+V++SYD +WD +G+ L++L +DD + +S ++ FSP G
Sbjct: 246 DFSPDSALLVTASYDTSVIMWDPYTGERLRSLHHTQLEAPVDDSDVHMSSLRSVCFSPEG 305
Query: 209 KYILAATLDNTLKLWDSKVVTP 230
Y+ D L++W ++ P
Sbjct: 306 LYLATVADDRLLRIWALELKAP 327
Score = 246 (91.7 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 73/238 (30%), Positives = 120/238 (50%)
Query: 18 VLKFTLAGHTKAVSSVKFSPNGEW-LASSSADKLIKIWGAYD-GKFEKTISGHKLGISDV 75
+L L+GH V + F+PNG L S+S DK ++IW GK + +SGH +
Sbjct: 144 LLLLNLSGHQDVVRDLSFTPNGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQWVYCC 203
Query: 76 AWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 135
+ S D +L S + +K++ +W + S ++ L+GH + V C+F+P S L+V+ S+D SV
Sbjct: 204 SISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPDSALLVTASYDTSV 263
Query: 136 RIWDVRTGKCLKTLPAHSD---PV--SAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 190
+WD TG+ L++L H+ PV S VH + S+ S +GL + A + L+
Sbjct: 264 IMWDPYTGERLRSLH-HTQLEAPVDDSDVHMSSLRSVCFSP--EGLY-LATVADDRLLRI 319
Query: 191 LIDDDNPPVSFVK--------FSPNGKYILAATLDNTLKLWDSKVVTPAI--ICSTPL 238
+ PV+F F P+G I T D ++ W + V ++ +C L
Sbjct: 320 WALELKAPVAFAPMTNGLCCTFFPHGGVIATGTRDGHVQFWTAPRVLSSLKHLCRKAL 377
Score = 148 (57.2 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 60/208 (28%), Positives = 91/208 (43%)
Query: 32 SVKFSPNGEWLASSSADKLIKI--WGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGS- 88
SV FSP+G W A S ++K+ W + K G + SS + GS
Sbjct: 31 SVAFSPDGSWFAWSQGHCVVKLVPWPLEEQFIPK-------GFEAKSRSSKNDSKGRGSL 83
Query: 89 DDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQ----SNLIVS-GSFDESVRIWDVRTG 143
+KTL ++ G + +PQ S LI++ G D ++IW+V+TG
Sbjct: 84 KEKTLDCGQIVWGLAFSPWPSPPSRKLWLRHHPQVPDVSCLILATGLNDGQIKIWEVQTG 143
Query: 144 KCLKTLPAHSDPVSAVHFNRDGSLI-VSSSYDGLCRIWD-TASGQCLKTLIDDDNPPVSF 201
L L H D V + F +GSLI VS+S D RIWD G+ ++ L V
Sbjct: 144 LLLLNLSGHQDVVRDLSFTPNGSLILVSASRDKTLRIWDLNKHGKQIQVL-SGHLQWVYC 202
Query: 202 VKFSPNGKYILAATLDNTLKLWDSKVVT 229
SP+ + +A + ++ LW + T
Sbjct: 203 CSISPDCSMLCSAAGEKSVFLWSMRSYT 230
Score = 132 (51.5 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 42/146 (28%), Positives = 63/146 (43%)
Query: 17 YVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK---------FEKTISG 67
Y L L GH +V S FSP+ L ++S D + +W Y G+ E +
Sbjct: 229 YTLIRKLEGHQSSVVSCDFSPDSALLVTASYDTSVIMWDPYTGERLRSLHHTQLEAPVDD 288
Query: 68 ---HKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSN 124
H + V +S + L + +DD+ L+IW L K +N + CC F P
Sbjct: 289 SDVHMSSLRSVCFSPEGLYLATVADDRLLRIWALEL-KAPVAFAPMTNGL-CCTFFPHGG 346
Query: 125 LIVSGSFDESVRIWDV-RTGKCLKTL 149
+I +G+ D V+ W R LK L
Sbjct: 347 VIATGTRDGHVQFWTAPRVLSSLKHL 372
>UNIPROTKB|G4MQX3 [details] [associations]
symbol:MGG_04719 "Guanine nucleotide-binding protein
subunit beta-like protein" species:242507 "Magnaporthe oryzae
70-15" [GO:0005575 "cellular_component" evidence=ND] [GO:0043581
"mycelium development" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001231 GO:GO:0043581 KO:K14753
RefSeq:XP_003710816.1 ProteinModelPortal:G4MQX3 SMR:G4MQX3
EnsemblFungi:MGG_04719T0 GeneID:2677887 KEGG:mgr:MGG_04719
Uniprot:G4MQX3
Length = 316
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 79/217 (36%), Positives = 116/217 (53%)
Query: 18 VLKFTLAGHTKAVSSVKFS-PNGEWLASSSADKLIKIWG-AYD----GKFEKTISGHKLG 71
+LK TL GH V+S+ S N L SSS DK + IW D G ++++ GH
Sbjct: 6 ILKGTLEGHNGWVTSLATSMENPNMLLSSSRDKTLIIWNLTRDETSYGYPKRSLKGHSHI 65
Query: 72 ISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 131
+SD SSD +S S DKTL++WEL++G + GH+N V +F+ + IVSGS
Sbjct: 66 VSDCVISSDGAYALSASWDKTLRLWELATGTTTRRFVGHTNDVLSVSFSADNRQIVSGSR 125
Query: 132 DESVRIWDVRTGKCLKTLP--AHSDPVSAVHF--NRDGSLIVSSSYDGLCRIWDTASGQC 187
D S+++W+ G C T+ HS+ VS V F N +IVSS +D L ++W+ +S +
Sbjct: 126 DRSIKLWNT-LGDCKYTITEKGHSEWVSCVRFSPNPQNPVIVSSGWDKLVKVWELSSCK- 183
Query: 188 LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
L+T ++ V SP+G + D T LWD
Sbjct: 184 LQTDHIGHTGYINTVTISPDGSLCASGGKDGTTMLWD 220
Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 60/210 (28%), Positives = 101/210 (48%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY-DGKFEKTISGHKLGISDVAWSSDSR- 82
GHT V SV FS + + S S D+ IK+W D K+ T GH +S V +S + +
Sbjct: 103 GHTNDVLSVSFSADNRQIVSGSRDRSIKLWNTLGDCKYTITEKGHSEWVSCVRFSPNPQN 162
Query: 83 -LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
++VS DK +K+WELSS K GH+ Y+ +P +L SG D + +WD+
Sbjct: 163 PVIVSSGWDKLVKVWELSSCKLQTDHIGHTGYINTVTISPDGSLCASGGKDGTTMLWDLN 222
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD------- 194
K L +L A+ D + A+ F+ + + +++ + I+D + L +
Sbjct: 223 ESKHLYSLNAN-DEIHALVFSPNRYWLCAATASSII-IFDLEKKSKVDELKPEFAAVGKK 280
Query: 195 -DNPPVSFVKFSPNGKYILAATLDNTLKLW 223
P + +S +G+ + A DN ++ W
Sbjct: 281 SREPECISLAWSADGQTLFAGYTDNIIRAW 310
Score = 155 (59.6 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 49/178 (27%), Positives = 84/178 (47%)
Query: 20 KFTLA--GHTKAVSSVKFSPNGE--WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV 75
K+T+ GH++ VS V+FSPN + + SS DKL+K+W K + GH I+ V
Sbjct: 139 KYTITEKGHSEWVSCVRFSPNPQNPVIVSSGWDKLVKVWELSSCKLQTDHIGHTGYINTV 198
Query: 76 AWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 135
S D L SG D T +W+L+ K L +L + + F+P + + + S+
Sbjct: 199 TISPDGSLCASGGKDGTTMLWDLNESKHLYSLNANDE-IHALVFSPNRYWLCAATAS-SI 256
Query: 136 RIWDV-RTGKCLKTLPAHS-------DPVS-AVHFNRDGSLIVSSSYDGLCRIWDTAS 184
I+D+ + K + P + +P ++ ++ DG + + D + R W S
Sbjct: 257 IIFDLEKKSKVDELKPEFAAVGKKSREPECISLAWSADGQTLFAGYTDNIIRAWGVMS 314
Score = 154 (59.3 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 36/126 (28%), Positives = 72/126 (57%)
Query: 106 TLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVRT-----GKCLKTLPAHSDPVSAV 159
TL+GH+ +V + ++ N+++S S D+++ IW++ G ++L HS VS
Sbjct: 10 TLEGHNGWVTSLATSMENPNMLLSSSRDKTLIIWNLTRDETSYGYPKRSLKGHSHIVSDC 69
Query: 160 HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNT 219
+ DG+ +S+S+D R+W+ A+G + + N +S V FS + + I++ + D +
Sbjct: 70 VISSDGAYALSASWDKTLRLWELATGTTTRRFVGHTNDVLS-VSFSADNRQIVSGSRDRS 128
Query: 220 LKLWDS 225
+KLW++
Sbjct: 129 IKLWNT 134
>UNIPROTKB|F1SEX9 [details] [associations]
symbol:WDR83 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GO:GO:0000375 GeneTree:ENSGT00700000104496 KO:K13124 OMA:CKQGAVR
EMBL:CU856041 RefSeq:XP_003123369.1 Ensembl:ENSSSCT00000014996
GeneID:100519823 KEGG:ssc:100519823 Uniprot:F1SEX9
Length = 311
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 67/198 (33%), Positives = 112/198 (56%)
Query: 29 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGS 88
AV +V+F+ +G + + +DK +K+W G +T SGH + D A S D+ L SG
Sbjct: 27 AVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSFDNSSLCSGG 86
Query: 89 DDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC--L 146
DK + +W+++SG+ ++ +GH+ V FN ++ +I+SGS D SVR WD R+ K +
Sbjct: 87 GDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSVRCWDCRSRKPEPV 146
Query: 147 KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP 206
+TL D +S+V + D +++ S DG R +D GQ + P++ FS
Sbjct: 147 QTLDEARDGISSVKVS-DHE-VLAGSVDGRVRRYDLRMGQLFSDYVGS---PITCTCFSR 201
Query: 207 NGKYILAATLDNTLKLWD 224
+G+ L ++LD+TL+L D
Sbjct: 202 DGQCTLVSSLDSTLRLLD 219
Score = 198 (74.8 bits), Expect = 9.7e-16, P = 9.7e-16
Identities = 48/167 (28%), Positives = 88/167 (52%)
Query: 63 KTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQ 122
KT+ + + V ++ D ++ DKTLK+W G L+T GH V +
Sbjct: 19 KTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSFD 78
Query: 123 SNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 182
++ + SG D++V +WDV +G+ ++ H+ V+ V FN + ++I+S S D R WD
Sbjct: 79 NSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSVRCWDC 138
Query: 183 ASG--QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKV 227
S + ++TL D+ +S VK S + +LA ++D ++ +D ++
Sbjct: 139 RSRKPEPVQTL-DEARDGISSVKVSDHE--VLAGSVDGRVRRYDLRM 182
Score = 176 (67.0 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 50/220 (22%), Positives = 98/220 (44%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
T +GH V S + L S DK + +W G+ + GH ++ V ++ ++
Sbjct: 62 TYSGHGYEVLDAAGSFDNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEA 121
Query: 82 RLLVSGSDDKTLKIWELSSGKC--LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
+++SGS D +++ W+ S K ++TL + + + +++GS D VR +D
Sbjct: 122 TVILSGSIDSSVRCWDCRSRKPEPVQTLDEARDGISSVKVSDHE--VLAGSVDGRVRRYD 179
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
+R G+ P++ F+RDG + SS D R+ D +G+ L N
Sbjct: 180 LRMGQLFSDYVG--SPITCTCFSRDGQCTLVSSLDSTLRLLDKDTGELLGEYTGHKNQEY 237
Query: 200 SF-VKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTPL 238
S ++++ + D + WD +V ++ + P+
Sbjct: 238 KLDCCLSERDTHVVSCSEDGKVFFWD--LVEGVLVLALPV 275
Score = 137 (53.3 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 35/129 (27%), Positives = 60/129 (46%)
Query: 102 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHF 161
K LKTL V FN N ++ D+++++W+ G L+T H V
Sbjct: 16 KRLKTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAG 75
Query: 162 NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLK 221
+ D S + S D +WD ASGQ ++ V+ V+F+ IL+ ++D++++
Sbjct: 76 SFDNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGK-VNTVQFNEEATVILSGSIDSSVR 134
Query: 222 LWDSKVVTP 230
WD + P
Sbjct: 135 CWDCRSRKP 143
>UNIPROTKB|J9P544 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:J9P544 Ensembl:ENSCAFT00000045166 Uniprot:J9P544
Length = 510
Score = 304 (112.1 bits), Expect = 1.3e-26, P = 1.3e-26
Identities = 72/222 (32%), Positives = 121/222 (54%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW---GAYDGKFEKTISGHKLGISDVAWS 78
TL H +AV ++FS NG + + S D+ I +W A D + + GH+ ++ V +
Sbjct: 283 TLIHHNEAVLHLRFS-NG-LMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF- 339
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
D + +VS S D+T+K+W S+ + ++TL GH + C + + L+VSGS D ++R+W
Sbjct: 340 -DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLW 396
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT---------ASGQCLK 189
D+ G CL+ L H + V + F D IVS +YDG ++WD AS CL+
Sbjct: 397 DIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLR 454
Query: 190 TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPA 231
TL++ V ++F I++++ D+T+ +WD V P+
Sbjct: 455 TLVEHSGR-VFRLQFDEF--QIISSSHDDTILIWDFLNVPPS 493
Score = 289 (106.8 bits), Expect = 6.2e-25, P = 6.2e-25
Identities = 63/172 (36%), Positives = 100/172 (58%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L+ L GH AV+ V F + +++ S+S D+ IK+W +F +T++GHK GI+ + +
Sbjct: 323 LRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR 380
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
RL+VSGS D T+++W++ G CL+ L+GH V C F+ + IVSG++D +++W
Sbjct: 381 D--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVW 436
Query: 139 DVRTGK---------CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181
D++ CL+TL HS V + F D I+SSS+D IWD
Sbjct: 437 DLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIWD 486
Score = 249 (92.7 bits), Expect = 1.6e-20, P = 1.6e-20
Identities = 54/148 (36%), Positives = 87/148 (58%)
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
D ++SG D ++KIW+ +S +CLK L GH+ V C ++ + +IV+GS D +VR+WD
Sbjct: 217 DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDER--VIVTGSSDSTVRVWD 274
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ--CLKTLIDDDNP 197
V TG+ L TL H++ V +H L+V+ S D +WD AS L+ ++
Sbjct: 275 VNTGEVLNTLIHHNEAV--LHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRA 332
Query: 198 PVSFVKFSPNGKYILAATLDNTLKLWDS 225
V+ V F + KYI++A+ D T+K+W +
Sbjct: 333 AVNVVDF--DDKYIVSASGDRTIKVWST 358
Score = 230 (86.0 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 58/218 (26%), Positives = 112/218 (51%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
L GHT +V +++ + + S+D +++W G+ T+ H + + +S+
Sbjct: 244 LTGHTGSVLCLQYDERV--IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG-- 299
Query: 83 LLVSGSDDKTLKIWELSSGKCL---KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
L+V+ S D+++ +W+++S + + L GH V +F+ + IVS S D ++++W
Sbjct: 300 LMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIKVWS 357
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
T + ++TL H ++ + + RD L+VS S D R+WD G CL+ L + V
Sbjct: 358 TSTCEFVRTLNGHKRGIACLQY-RD-RLVVSGSSDNTIRLWDIECGACLRVL-EGHEELV 414
Query: 200 SFVKFSPNGKYILAATLDNTLKLWDSKV-VTPAIICST 236
++F + K I++ D +K+WD + + P ST
Sbjct: 415 RCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPAST 450
Score = 226 (84.6 bits), Expect = 5.1e-18, P = 5.1e-18
Identities = 57/202 (28%), Positives = 112/202 (55%)
Query: 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV 85
++K V +++ + E + S D IKIW + K ++GH G S + D R++V
Sbjct: 207 NSKGVYCLQY--DDEKIISGLRDNSIKIWDKTSLECLKVLTGHT-G-SVLCLQYDERVIV 262
Query: 86 SGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 145
+GS D T+++W++++G+ L TL H+ V F+ + L+V+ S D S+ +WD+ +
Sbjct: 263 TGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKDRSIAVWDMASATD 320
Query: 146 L---KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 202
+ + L H V+ V F D IVS+S D ++W T++ + ++TL + ++ +
Sbjct: 321 ITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTL-NGHKRGIACL 377
Query: 203 KFSPNGKYILAATLDNTLKLWD 224
++ + +++ + DNT++LWD
Sbjct: 378 QY--RDRLVVSGSSDNTIRLWD 397
>UNIPROTKB|B4DH70 [details] [associations]
symbol:FBXW11 "cDNA FLJ54601, highly similar to F-box/WD
repeat protein 11" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AC011410 HOGENOM:HOG000006638
HOVERGEN:HBG002521 OrthoDB:EOG4F1X2M UniGene:Hs.484138
HGNC:HGNC:13607 EMBL:AC011387 EMBL:AC113342 EMBL:AK294956
IPI:IPI01013614 SMR:B4DH70 STRING:B4DH70 Ensembl:ENST00000425623
UCSC:uc011dey.1 Uniprot:B4DH70
Length = 510
Score = 304 (112.1 bits), Expect = 1.3e-26, P = 1.3e-26
Identities = 72/222 (32%), Positives = 121/222 (54%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW---GAYDGKFEKTISGHKLGISDVAWS 78
TL H +AV ++FS NG + + S D+ I +W A D + + GH+ ++ V +
Sbjct: 283 TLIHHNEAVLHLRFS-NG-LMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF- 339
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
D + +VS S D+T+K+W S+ + ++TL GH + C + + L+VSGS D ++R+W
Sbjct: 340 -DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLW 396
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT---------ASGQCLK 189
D+ G CL+ L H + V + F D IVS +YDG ++WD AS CL+
Sbjct: 397 DIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLR 454
Query: 190 TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPA 231
TL++ V ++F I++++ D+T+ +WD V P+
Sbjct: 455 TLVEHSGR-VFRLQFDEF--QIISSSHDDTILIWDFLNVPPS 493
Score = 289 (106.8 bits), Expect = 6.2e-25, P = 6.2e-25
Identities = 63/172 (36%), Positives = 100/172 (58%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L+ L GH AV+ V F + +++ S+S D+ IK+W +F +T++GHK GI+ + +
Sbjct: 323 LRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR 380
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
RL+VSGS D T+++W++ G CL+ L+GH V C F+ + IVSG++D +++W
Sbjct: 381 D--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVW 436
Query: 139 DVRTGK---------CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181
D++ CL+TL HS V + F D I+SSS+D IWD
Sbjct: 437 DLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIWD 486
Score = 249 (92.7 bits), Expect = 1.6e-20, P = 1.6e-20
Identities = 54/148 (36%), Positives = 87/148 (58%)
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
D ++SG D ++KIW+ +S +CLK L GH+ V C ++ + +IV+GS D +VR+WD
Sbjct: 217 DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDER--VIVTGSSDSTVRVWD 274
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ--CLKTLIDDDNP 197
V TG+ L TL H++ V +H L+V+ S D +WD AS L+ ++
Sbjct: 275 VNTGEVLNTLIHHNEAV--LHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRA 332
Query: 198 PVSFVKFSPNGKYILAATLDNTLKLWDS 225
V+ V F + KYI++A+ D T+K+W +
Sbjct: 333 AVNVVDF--DDKYIVSASGDRTIKVWST 358
Score = 230 (86.0 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 58/218 (26%), Positives = 112/218 (51%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
L GHT +V +++ + + S+D +++W G+ T+ H + + +S+
Sbjct: 244 LTGHTGSVLCLQYDERV--IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG-- 299
Query: 83 LLVSGSDDKTLKIWELSSGKCL---KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
L+V+ S D+++ +W+++S + + L GH V +F+ + IVS S D ++++W
Sbjct: 300 LMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIKVWS 357
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
T + ++TL H ++ + + RD L+VS S D R+WD G CL+ L + V
Sbjct: 358 TSTCEFVRTLNGHKRGIACLQY-RD-RLVVSGSSDNTIRLWDIECGACLRVL-EGHEELV 414
Query: 200 SFVKFSPNGKYILAATLDNTLKLWDSKV-VTPAIICST 236
++F + K I++ D +K+WD + + P ST
Sbjct: 415 RCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPAST 450
Score = 226 (84.6 bits), Expect = 5.1e-18, P = 5.1e-18
Identities = 57/202 (28%), Positives = 112/202 (55%)
Query: 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV 85
++K V +++ + E + S D IKIW + K ++GH G S + D R++V
Sbjct: 207 NSKGVYCLQY--DDEKIISGLRDNSIKIWDKTSLECLKVLTGHT-G-SVLCLQYDERVIV 262
Query: 86 SGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 145
+GS D T+++W++++G+ L TL H+ V F+ + L+V+ S D S+ +WD+ +
Sbjct: 263 TGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKDRSIAVWDMASATD 320
Query: 146 L---KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 202
+ + L H V+ V F D IVS+S D ++W T++ + ++TL + ++ +
Sbjct: 321 ITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTL-NGHKRGIACL 377
Query: 203 KFSPNGKYILAATLDNTLKLWD 224
++ + +++ + DNT++LWD
Sbjct: 378 QY--RDRLVVSGSSDNTIRLWD 397
>UNIPROTKB|F1RG42 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 KO:K03130 OMA:YVDSEGP
EMBL:CU468504 RefSeq:XP_001927989.1 ProteinModelPortal:F1RG42
Ensembl:ENSSSCT00000011153 GeneID:100155476 KEGG:ssc:100155476
Uniprot:F1RG42
Length = 589
Score = 306 (112.8 bits), Expect = 1.4e-26, P = 1.4e-26
Identities = 68/205 (33%), Positives = 105/205 (51%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI--SGHKLGISDVAWSSD 80
L GH V S +F + L S S D I+ W G F T+ GH + DV S
Sbjct: 338 LRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDL--GSFTNTVLYQGHAYPVWDVDISPY 395
Query: 81 SRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 140
S SGS D+T ++W L+ GH V C F+P SN + +GS D++VR+W
Sbjct: 396 SLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSA 455
Query: 141 RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD-DNPPV 199
+ G ++ H PV ++ F+ +G + S+ D ++WD ASG K L DN +
Sbjct: 456 QQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDN--I 513
Query: 200 SFVKFSPNGKYILAATLDNTLKLWD 224
+ + FSP+ I +A++DN++++WD
Sbjct: 514 TSLTFSPDSSLIASASMDNSVRVWD 538
Score = 282 (104.3 bits), Expect = 6.0e-24, P = 6.0e-24
Identities = 53/144 (36%), Positives = 82/144 (56%)
Query: 17 YVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA 76
Y L+ AGH V VKF PN +LA+ S DK +++W A G + +GH+ + +A
Sbjct: 417 YPLRI-YAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLA 475
Query: 77 WSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 136
+S + + L S +D+ LK+W+L+SG K L+GH++ + F+P S+LI S S D SVR
Sbjct: 476 FSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDNITSLTFSPDSSLIASASMDNSVR 535
Query: 137 IWDVRTGKCLKTLPAHSDPVSAVH 160
+WD+R C S + V+
Sbjct: 536 VWDIRNTHCSAPTDGSSSELVGVY 559
Score = 262 (97.3 bits), Expect = 8.9e-22, P = 8.9e-22
Identities = 51/164 (31%), Positives = 85/164 (51%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKLGISDVAWSSDSRL 83
GH V V SP + AS S D+ ++W ++D + I +GH + V + +S
Sbjct: 382 GHAYPVWDVDISPYSLYFASGSHDRTARLW-SFDRTYPLRIYAGHLADVDCVKFHPNSNY 440
Query: 84 LVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 143
L +GS DKT+++W G ++ GH V F+P + S D+ +++WD+ +G
Sbjct: 441 LATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASG 500
Query: 144 KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC 187
K L H+D ++++ F+ D SLI S+S D R+WD + C
Sbjct: 501 TLFKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRNTHC 544
Score = 218 (81.8 bits), Expect = 5.1e-17, P = 5.1e-17
Identities = 50/162 (30%), Positives = 79/162 (48%)
Query: 63 KTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQ 122
K + GH + + +DS L+S S+D +++ W+L S +GH+ V+ + +P
Sbjct: 336 KVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPY 395
Query: 123 SNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 182
S SGS D + R+W L+ H V V F+ + + + + S D R+W
Sbjct: 396 SLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSA 455
Query: 183 ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
G ++ L PV + FSPNGKY+ +A D LKLWD
Sbjct: 456 QQGNSVR-LFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWD 496
Score = 170 (64.9 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 49/197 (24%), Positives = 88/197 (44%)
Query: 30 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSD 89
+++ + SP + LA+ + IK+W K + H++ +S + + D ++ D
Sbjct: 271 LNTAEISPESKLLAAGFDNSCIKLWSLRSKKLKP--EPHRVDVSRIHLACD---ILEEED 325
Query: 90 DKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTL 149
D+ + G +K L+GH V+ F S+ ++S S D S+R WD+ +
Sbjct: 326 DEDDDV-----GTEMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLY 380
Query: 150 PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK 209
H+ PV V + S S+D R+W L+ + V VKF PN
Sbjct: 381 QGHAYPVWDVDISPYSLYFASGSHDRTARLWSFDRTYPLR-IYAGHLADVDCVKFHPNSN 439
Query: 210 YILAATLDNTLKLWDSK 226
Y+ + D T++LW ++
Sbjct: 440 YLATGSTDKTVRLWSAQ 456
Score = 167 (63.8 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 33/102 (32%), Positives = 56/102 (54%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLL 84
GH V S+ FSPNG++LAS+ D+ +K+W G K + GH I+ + +S DS L+
Sbjct: 466 GHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDNITSLTFSPDSSLI 525
Query: 85 VSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLI 126
S S D ++++W++ + C G S+ + SN++
Sbjct: 526 ASASMDNSVRVWDIRNTHCSAPTDGSSSELVGVYTGQMSNVL 567
>MGI|MGI:1915086 [details] [associations]
symbol:Wdr83 "WD repeat domain containing 83" species:10090
"Mus musculus" [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1915086 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 GO:GO:0000375
GeneTree:ENSGT00700000104496 HOGENOM:HOG000091642 CTD:84292
HOVERGEN:HBG105288 KO:K13124 OrthoDB:EOG4ZCT4V OMA:CKQGAVR
EMBL:AY365434 EMBL:AK005790 EMBL:AK020654 EMBL:BC005587
EMBL:BC019369 EMBL:BC094624 IPI:IPI00118714 IPI:IPI00407931
IPI:IPI00624217 RefSeq:NP_080675.2 UniGene:Mm.334680
ProteinModelPortal:Q9DAJ4 SMR:Q9DAJ4 STRING:Q9DAJ4
PhosphoSite:Q9DAJ4 PRIDE:Q9DAJ4 Ensembl:ENSMUST00000093357
Ensembl:ENSMUST00000149050 GeneID:67836 KEGG:mmu:67836
UCSC:uc009mph.1 InParanoid:Q9DAJ4 NextBio:325661 Bgee:Q9DAJ4
CleanEx:MM_1500041N16RIK Genevestigator:Q9DAJ4
GermOnline:ENSMUSG00000005150 Uniprot:Q9DAJ4
Length = 315
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 68/198 (34%), Positives = 113/198 (57%)
Query: 29 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGS 88
AV +V+F+ +G + + +DK +K+W G +T SGH + D A S D+ L SG
Sbjct: 27 AVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSFDNSHLCSGG 86
Query: 89 DDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC--L 146
DKT+ +W++++G+ ++ +GH+ V FN ++ +I+SGS D SVR WD R+ K +
Sbjct: 87 GDKTVVLWDVATGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSVRCWDCRSRKPEPV 146
Query: 147 KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP 206
+TL D +S+V + D I++ S DG R +D GQ + P++ FS
Sbjct: 147 QTLDEARDGISSVKVS-DHE-ILAGSVDGRVRRYDLRMGQVSSDYVGS---PITCTCFSR 201
Query: 207 NGKYILAATLDNTLKLWD 224
+G+ L ++LD+TL+L D
Sbjct: 202 DGQCTLISSLDSTLRLLD 219
Score = 204 (76.9 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 55/188 (29%), Positives = 97/188 (51%)
Query: 63 KTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQ 122
KT+ + + V ++ D ++ DKTLK+W G L+T GH V +
Sbjct: 19 KTLDCSQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSFD 78
Query: 123 SNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 182
++ + SG D++V +WDV TG+ ++ H+ V+ V FN + ++I+S S D R WD
Sbjct: 79 NSHLCSGGGDKTVVLWDVATGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSVRCWDC 138
Query: 183 ASG--QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKV--VTPAIICSTPL 238
S + ++TL D+ +S VK S + ILA ++D ++ +D ++ V+ + S P+
Sbjct: 139 RSRKPEPVQTL-DEARDGISSVKVSDHE--ILAGSVDGRVRRYDLRMGQVSSDYVGS-PI 194
Query: 239 NLNYFYRN 246
F R+
Sbjct: 195 TCTCFSRD 202
Score = 183 (69.5 bits), Expect = 5.9e-14, P = 5.9e-14
Identities = 53/223 (23%), Positives = 100/223 (44%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
T +GH V S + L S DK + +W G+ + GH ++ V ++ ++
Sbjct: 62 TYSGHGYEVLDAAGSFDNSHLCSGGGDKTVVLWDVATGQVVRKFRGHAGKVNTVQFNEEA 121
Query: 82 RLLVSGSDDKTLKIWELSSGKC--LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
+++SGS D +++ W+ S K ++TL + + + I++GS D VR +D
Sbjct: 122 TVILSGSIDSSVRCWDCRSRKPEPVQTLDEARDGISSVKVSDHE--ILAGSVDGRVRRYD 179
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
+R G+ P++ F+RDG + SS D R+ D +G+ L + N
Sbjct: 180 LRMGQVSSDYVG--SPITCTCFSRDGQCTLISSLDSTLRLLDKDTGELLGEYVGHKNQQY 237
Query: 200 SF-VKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTPLNLN 241
S ++++ + D + WD +V A+ + P+ N
Sbjct: 238 KLDCCLSERDTHVVSCSEDGKVFFWD--LVEGALALALPVGSN 278
Score = 132 (51.5 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 33/129 (25%), Positives = 60/129 (46%)
Query: 102 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHF 161
K +KTL V FN N ++ D+++++W+ G L+T H V
Sbjct: 16 KRMKTLDCSQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAG 75
Query: 162 NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLK 221
+ D S + S D +WD A+GQ ++ V+ V+F+ IL+ ++D++++
Sbjct: 76 SFDNSHLCSGGGDKTVVLWDVATGQVVRKFRGHAGK-VNTVQFNEEATVILSGSIDSSVR 134
Query: 222 LWDSKVVTP 230
WD + P
Sbjct: 135 CWDCRSRKP 143
Score = 111 (44.1 bits), Expect = 0.00052, P = 0.00052
Identities = 42/161 (26%), Positives = 71/161 (44%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL +SSVK S + E LA S D ++ + G+ G I+ +S D
Sbjct: 148 TLDEARDGISSVKVSDH-EILAGS-VDGRVRRYDLRMGQVSSDYVGSP--ITCTCFSRDG 203
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSN--YVFCCNFNPQSNLIVSGSFDESVRIWD 139
+ + S D TL++ + +G+ L GH N Y C + + +VS S D V WD
Sbjct: 204 QCTLISSLDSTLRLLDKDTGELLGEYVGHKNQQYKLDCCLSERDTHVVSCSEDGKVFFWD 263
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 180
+ G LP S+ V ++ ++ ++++ G + W
Sbjct: 264 LVEGALALALPVGSNVVQSLAYHPTEPCLLTAM-GGSIQYW 303
>UNIPROTKB|Q0VCN2 [details] [associations]
symbol:MORG1 "Mitogen-activated protein kinase organizer 1"
species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=IEA] [GO:0016301 "kinase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016301 GO:GO:0071013 GO:GO:0000375
GeneTree:ENSGT00700000104496 HOGENOM:HOG000091642 CTD:84292
HOVERGEN:HBG105288 KO:K13124 OrthoDB:EOG4ZCT4V OMA:CKQGAVR
EMBL:DAAA02019387 EMBL:DAAA02019388 EMBL:BC120088 IPI:IPI00687810
RefSeq:NP_001073118.1 UniGene:Bt.64656 Ensembl:ENSBTAT00000008196
GeneID:780845 KEGG:bta:780845 InParanoid:Q0VCN2 NextBio:20924512
Uniprot:Q0VCN2
Length = 315
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 65/198 (32%), Positives = 113/198 (57%)
Query: 29 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGS 88
AV +V+F+ +G + + +DK +K+W G +T SGH + D A S D+ L SG
Sbjct: 27 AVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSFDNSSLCSGG 86
Query: 89 DDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC--L 146
DK + +W+++SG+ ++ +GH+ V FN ++ +I+SGS D ++R WD R+ K +
Sbjct: 87 GDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSTIRCWDCRSRKPEPV 146
Query: 147 KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP 206
+TL D +S+V + D +++ S DG R +D GQ + P++ + FS
Sbjct: 147 QTLDEARDGISSVKVS-DHE-VLAGSVDGRVRRYDLRMGQLFSDYVGS---PITCICFSR 201
Query: 207 NGKYILAATLDNTLKLWD 224
+G+ L ++LD+TL+L D
Sbjct: 202 DGQCTLVSSLDSTLRLLD 219
Score = 199 (75.1 bits), Expect = 8.1e-16, P = 8.1e-16
Identities = 48/167 (28%), Positives = 88/167 (52%)
Query: 63 KTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQ 122
KT+ + + V ++ D ++ DKTLK+W G L+T GH V +
Sbjct: 19 KTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSFD 78
Query: 123 SNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 182
++ + SG D++V +WDV +G+ ++ H+ V+ V FN + ++I+S S D R WD
Sbjct: 79 NSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSTIRCWDC 138
Query: 183 ASG--QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKV 227
S + ++TL D+ +S VK S + +LA ++D ++ +D ++
Sbjct: 139 RSRKPEPVQTL-DEARDGISSVKVSDHE--VLAGSVDGRVRRYDLRM 182
Score = 184 (69.8 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 52/220 (23%), Positives = 99/220 (45%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
T +GH V S + L S DK + +W G+ + GH ++ V ++ ++
Sbjct: 62 TYSGHGYEVLDAAGSFDNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEA 121
Query: 82 RLLVSGSDDKTLKIWELSSGKC--LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
+++SGS D T++ W+ S K ++TL + + + +++GS D VR +D
Sbjct: 122 TVILSGSIDSTIRCWDCRSRKPEPVQTLDEARDGISSVKVSDHE--VLAGSVDGRVRRYD 179
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
+R G+ P++ + F+RDG + SS D R+ D +G+ L N
Sbjct: 180 LRMGQLFSDYVG--SPITCICFSRDGQCTLVSSLDSTLRLLDKDTGELLGEYTGHKNKEY 237
Query: 200 SF-VKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTPL 238
S ++++ + D + WD +V A+ + P+
Sbjct: 238 KLDCCLSERDTHVVSCSEDGKVFFWD--LVEGALALALPV 275
Score = 142 (55.0 bits), Expect = 9.9e-08, P = 9.9e-08
Identities = 36/129 (27%), Positives = 60/129 (46%)
Query: 102 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHF 161
K LKTL V FN N ++ D+++++W+ G L+T H V
Sbjct: 16 KRLKTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAG 75
Query: 162 NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLK 221
+ D S + S D +WD ASGQ ++ V+ V+F+ IL+ ++D+T++
Sbjct: 76 SFDNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGK-VNTVQFNEEATVILSGSIDSTIR 134
Query: 222 LWDSKVVTP 230
WD + P
Sbjct: 135 CWDCRSRKP 143
>UNIPROTKB|E2RRL3 [details] [associations]
symbol:WDR83 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GO:GO:0000375 GeneTree:ENSGT00700000104496 CTD:84292 KO:K13124
OMA:CKQGAVR EMBL:AAEX03012407 RefSeq:XP_542047.1
ProteinModelPortal:E2RRL3 Ensembl:ENSCAFT00000027316 GeneID:484931
KEGG:cfa:484931 NextBio:20858998 Uniprot:E2RRL3
Length = 315
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 66/198 (33%), Positives = 112/198 (56%)
Query: 29 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGS 88
AV +V+F+ +G + + +DK +K+W G +T SGH + D A S D+ L SG
Sbjct: 27 AVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSFDNSSLCSGG 86
Query: 89 DDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC--L 146
DK + +W+++SG+ ++ +GH+ V FN ++ +I+SGS D S+R WD R+ + +
Sbjct: 87 GDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSIRCWDCRSRRPEPV 146
Query: 147 KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP 206
+TL D +S+V + D ++S S DG R +D GQ + P++ FS
Sbjct: 147 QTLDEARDGISSVKVS-DHE-VLSGSVDGRVRRYDLRMGQLFSDYVGS---PITCTCFSR 201
Query: 207 NGKYILAATLDNTLKLWD 224
+G+ L ++LD+TL+L D
Sbjct: 202 DGQCTLVSSLDSTLRLLD 219
Score = 195 (73.7 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 47/167 (28%), Positives = 88/167 (52%)
Query: 63 KTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQ 122
KT+ + + V ++ D ++ DKTLK+W G L+T GH V +
Sbjct: 19 KTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSFD 78
Query: 123 SNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 182
++ + SG D++V +WDV +G+ ++ H+ V+ V FN + ++I+S S D R WD
Sbjct: 79 NSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSIRCWDC 138
Query: 183 ASG--QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKV 227
S + ++TL D+ +S VK S + +L+ ++D ++ +D ++
Sbjct: 139 RSRRPEPVQTL-DEARDGISSVKVSDHE--VLSGSVDGRVRRYDLRM 182
Score = 178 (67.7 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 51/220 (23%), Positives = 98/220 (44%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
T +GH V S + L S DK + +W G+ + GH ++ V ++ ++
Sbjct: 62 TYSGHGYEVLDAAGSFDNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEA 121
Query: 82 RLLVSGSDDKTLKIWELSSGKC--LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
+++SGS D +++ W+ S + ++TL + + + ++SGS D VR +D
Sbjct: 122 TVILSGSIDSSIRCWDCRSRRPEPVQTLDEARDGISSVKVSDHE--VLSGSVDGRVRRYD 179
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
+R G+ P++ F+RDG + SS D R+ D +G+ L N
Sbjct: 180 LRMGQLFSDYVG--SPITCTCFSRDGQCTLVSSLDSTLRLLDKDTGELLGEYTGHKNQEY 237
Query: 200 SF-VKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTPL 238
S ++++ + D + WD +V A+ + P+
Sbjct: 238 KLDCCLSERDTHVVSCSEDGKVYFWD--LVEGALALALPV 275
Score = 135 (52.6 bits), Expect = 7.4e-07, P = 7.4e-07
Identities = 34/129 (26%), Positives = 60/129 (46%)
Query: 102 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHF 161
K +KTL V FN N ++ D+++++W+ G L+T H V
Sbjct: 16 KRVKTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAG 75
Query: 162 NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLK 221
+ D S + S D +WD ASGQ ++ V+ V+F+ IL+ ++D++++
Sbjct: 76 SFDNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGK-VNTVQFNEEATVILSGSIDSSIR 134
Query: 222 LWDSKVVTP 230
WD + P
Sbjct: 135 CWDCRSRRP 143
>UNIPROTKB|F1M373 [details] [associations]
symbol:Fbxw11 "Protein Fbxw11" species:10116 "Rattus
norvegicus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1309121 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 GO:GO:0045892
GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842
GO:GO:0045862 GO:GO:0000209 GO:GO:0031648 GO:GO:0042347
GO:GO:0031146 GO:GO:0042753 IPI:IPI00870648
Ensembl:ENSRNOT00000006078 ArrayExpress:F1M373 Uniprot:F1M373
Length = 527
Score = 304 (112.1 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 72/222 (32%), Positives = 121/222 (54%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW---GAYDGKFEKTISGHKLGISDVAWS 78
TL H +AV ++FS NG + + S D+ I +W A D + + GH+ ++ V +
Sbjct: 300 TLIHHNEAVLHLRFS-NG-LMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF- 356
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
D + +VS S D+T+K+W S+ + ++TL GH + C + + L+VSGS D ++R+W
Sbjct: 357 -DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLW 413
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT---------ASGQCLK 189
D+ G CL+ L H + V + F D IVS +YDG ++WD AS CL+
Sbjct: 414 DIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLR 471
Query: 190 TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPA 231
TL++ V ++F I++++ D+T+ +WD V P+
Sbjct: 472 TLVEHSGR-VFRLQFDEF--QIISSSHDDTILIWDFLNVPPS 510
Score = 289 (106.8 bits), Expect = 7.1e-25, P = 7.1e-25
Identities = 63/172 (36%), Positives = 100/172 (58%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L+ L GH AV+ V F + +++ S+S D+ IK+W +F +T++GHK GI+ + +
Sbjct: 340 LRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR 397
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
RL+VSGS D T+++W++ G CL+ L+GH V C F+ + IVSG++D +++W
Sbjct: 398 D--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVW 453
Query: 139 DVRTGK---------CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181
D++ CL+TL HS V + F D I+SSS+D IWD
Sbjct: 454 DLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIWD 503
Score = 250 (93.1 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 55/148 (37%), Positives = 87/148 (58%)
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
D ++SG D ++KIW+ SS +CLK L GH+ V C ++ + +IV+GS D +VR+WD
Sbjct: 234 DDDKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYDER--VIVTGSSDSTVRVWD 291
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ--CLKTLIDDDNP 197
V TG+ L TL H++ V +H L+V+ S D +WD AS L+ ++
Sbjct: 292 VNTGEVLNTLIHHNEAV--LHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRA 349
Query: 198 PVSFVKFSPNGKYILAATLDNTLKLWDS 225
V+ V F + KYI++A+ D T+K+W +
Sbjct: 350 AVNVVDF--DDKYIVSASGDRTIKVWST 375
Score = 230 (86.0 bits), Expect = 2.0e-18, P = 2.0e-18
Identities = 58/218 (26%), Positives = 112/218 (51%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
L GHT +V +++ + + S+D +++W G+ T+ H + + +S+
Sbjct: 261 LTGHTGSVLCLQYDERV--IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG-- 316
Query: 83 LLVSGSDDKTLKIWELSSGKCL---KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
L+V+ S D+++ +W+++S + + L GH V +F+ + IVS S D ++++W
Sbjct: 317 LMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIKVWS 374
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
T + ++TL H ++ + + RD L+VS S D R+WD G CL+ L + V
Sbjct: 375 TSTCEFVRTLNGHKRGIACLQY-RD-RLVVSGSSDNTIRLWDIECGACLRVL-EGHEELV 431
Query: 200 SFVKFSPNGKYILAATLDNTLKLWDSKV-VTPAIICST 236
++F + K I++ D +K+WD + + P ST
Sbjct: 432 RCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPAST 467
Score = 223 (83.6 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 56/202 (27%), Positives = 112/202 (55%)
Query: 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV 85
++K V +++ + + + S D IKIW + K ++GH G S + D R++V
Sbjct: 224 NSKGVYCLQY--DDDKIISGLRDNSIKIWDKSSLECLKVLTGHT-G-SVLCLQYDERVIV 279
Query: 86 SGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 145
+GS D T+++W++++G+ L TL H+ V F+ + L+V+ S D S+ +WD+ +
Sbjct: 280 TGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKDRSIAVWDMASATD 337
Query: 146 L---KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 202
+ + L H V+ V F D IVS+S D ++W T++ + ++TL + ++ +
Sbjct: 338 ITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTL-NGHKRGIACL 394
Query: 203 KFSPNGKYILAATLDNTLKLWD 224
++ + +++ + DNT++LWD
Sbjct: 395 QY--RDRLVVSGSSDNTIRLWD 414
>UNIPROTKB|E2RTE4 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:E2RTE4 Ensembl:ENSCAFT00000026749 Uniprot:E2RTE4
Length = 529
Score = 304 (112.1 bits), Expect = 1.6e-26, P = 1.6e-26
Identities = 72/222 (32%), Positives = 121/222 (54%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW---GAYDGKFEKTISGHKLGISDVAWS 78
TL H +AV ++FS NG + + S D+ I +W A D + + GH+ ++ V +
Sbjct: 302 TLIHHNEAVLHLRFS-NG-LMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF- 358
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
D + +VS S D+T+K+W S+ + ++TL GH + C + + L+VSGS D ++R+W
Sbjct: 359 -DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLW 415
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT---------ASGQCLK 189
D+ G CL+ L H + V + F D IVS +YDG ++WD AS CL+
Sbjct: 416 DIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLR 473
Query: 190 TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPA 231
TL++ V ++F I++++ D+T+ +WD V P+
Sbjct: 474 TLVEHSGR-VFRLQFDEF--QIISSSHDDTILIWDFLNVPPS 512
Score = 289 (106.8 bits), Expect = 7.2e-25, P = 7.2e-25
Identities = 63/172 (36%), Positives = 100/172 (58%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L+ L GH AV+ V F + +++ S+S D+ IK+W +F +T++GHK GI+ + +
Sbjct: 342 LRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR 399
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
RL+VSGS D T+++W++ G CL+ L+GH V C F+ + IVSG++D +++W
Sbjct: 400 D--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVW 455
Query: 139 DVRTGK---------CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181
D++ CL+TL HS V + F D I+SSS+D IWD
Sbjct: 456 DLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIWD 505
Score = 249 (92.7 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 54/148 (36%), Positives = 87/148 (58%)
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
D ++SG D ++KIW+ +S +CLK L GH+ V C ++ + +IV+GS D +VR+WD
Sbjct: 236 DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDER--VIVTGSSDSTVRVWD 293
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ--CLKTLIDDDNP 197
V TG+ L TL H++ V +H L+V+ S D +WD AS L+ ++
Sbjct: 294 VNTGEVLNTLIHHNEAV--LHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRA 351
Query: 198 PVSFVKFSPNGKYILAATLDNTLKLWDS 225
V+ V F + KYI++A+ D T+K+W +
Sbjct: 352 AVNVVDF--DDKYIVSASGDRTIKVWST 377
Score = 230 (86.0 bits), Expect = 2.0e-18, P = 2.0e-18
Identities = 58/218 (26%), Positives = 112/218 (51%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
L GHT +V +++ + + S+D +++W G+ T+ H + + +S+
Sbjct: 263 LTGHTGSVLCLQYDERV--IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG-- 318
Query: 83 LLVSGSDDKTLKIWELSSGKCL---KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
L+V+ S D+++ +W+++S + + L GH V +F+ + IVS S D ++++W
Sbjct: 319 LMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIKVWS 376
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
T + ++TL H ++ + + RD L+VS S D R+WD G CL+ L + V
Sbjct: 377 TSTCEFVRTLNGHKRGIACLQY-RD-RLVVSGSSDNTIRLWDIECGACLRVL-EGHEELV 433
Query: 200 SFVKFSPNGKYILAATLDNTLKLWDSKV-VTPAIICST 236
++F + K I++ D +K+WD + + P ST
Sbjct: 434 RCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPAST 469
Score = 226 (84.6 bits), Expect = 5.5e-18, P = 5.5e-18
Identities = 57/202 (28%), Positives = 112/202 (55%)
Query: 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV 85
++K V +++ + E + S D IKIW + K ++GH G S + D R++V
Sbjct: 226 NSKGVYCLQY--DDEKIISGLRDNSIKIWDKTSLECLKVLTGHT-G-SVLCLQYDERVIV 281
Query: 86 SGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 145
+GS D T+++W++++G+ L TL H+ V F+ + L+V+ S D S+ +WD+ +
Sbjct: 282 TGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKDRSIAVWDMASATD 339
Query: 146 L---KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 202
+ + L H V+ V F D IVS+S D ++W T++ + ++TL + ++ +
Sbjct: 340 ITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTL-NGHKRGIACL 396
Query: 203 KFSPNGKYILAATLDNTLKLWD 224
++ + +++ + DNT++LWD
Sbjct: 397 QY--RDRLVVSGSSDNTIRLWD 416
>UNIPROTKB|F1MLG0 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045862 "positive
regulation of proteolysis" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0031648 "protein destabilization" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:DAAA02049882
EMBL:DAAA02049883 IPI:IPI00699126 Ensembl:ENSBTAT00000061118
Uniprot:F1MLG0
Length = 530
Score = 304 (112.1 bits), Expect = 1.6e-26, P = 1.6e-26
Identities = 72/222 (32%), Positives = 121/222 (54%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW---GAYDGKFEKTISGHKLGISDVAWS 78
TL H +AV ++FS NG + + S D+ I +W A D + + GH+ ++ V +
Sbjct: 303 TLIHHNEAVLHLRFS-NG-LMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF- 359
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
D + +VS S D+T+K+W S+ + ++TL GH + C + + L+VSGS D ++R+W
Sbjct: 360 -DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLW 416
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT---------ASGQCLK 189
D+ G CL+ L H + V + F D IVS +YDG ++WD AS CL+
Sbjct: 417 DIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLR 474
Query: 190 TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPA 231
TL++ V ++F I++++ D+T+ +WD V P+
Sbjct: 475 TLVEHSGR-VFRLQFDEF--QIISSSHDDTILIWDFLNVPPS 513
Score = 289 (106.8 bits), Expect = 7.2e-25, P = 7.2e-25
Identities = 63/172 (36%), Positives = 100/172 (58%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L+ L GH AV+ V F + +++ S+S D+ IK+W +F +T++GHK GI+ + +
Sbjct: 343 LRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR 400
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
RL+VSGS D T+++W++ G CL+ L+GH V C F+ + IVSG++D +++W
Sbjct: 401 D--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVW 456
Query: 139 DVRTGK---------CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181
D++ CL+TL HS V + F D I+SSS+D IWD
Sbjct: 457 DLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIWD 506
Score = 249 (92.7 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 54/148 (36%), Positives = 87/148 (58%)
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
D ++SG D ++KIW+ +S +CLK L GH+ V C ++ + +IV+GS D +VR+WD
Sbjct: 237 DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDER--VIVTGSSDSTVRVWD 294
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ--CLKTLIDDDNP 197
V TG+ L TL H++ V +H L+V+ S D +WD AS L+ ++
Sbjct: 295 VNTGEVLNTLIHHNEAV--LHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRA 352
Query: 198 PVSFVKFSPNGKYILAATLDNTLKLWDS 225
V+ V F + KYI++A+ D T+K+W +
Sbjct: 353 AVNVVDF--DDKYIVSASGDRTIKVWST 378
Score = 230 (86.0 bits), Expect = 2.0e-18, P = 2.0e-18
Identities = 58/218 (26%), Positives = 112/218 (51%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
L GHT +V +++ + + S+D +++W G+ T+ H + + +S+
Sbjct: 264 LTGHTGSVLCLQYDERV--IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG-- 319
Query: 83 LLVSGSDDKTLKIWELSSGKCL---KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
L+V+ S D+++ +W+++S + + L GH V +F+ + IVS S D ++++W
Sbjct: 320 LMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIKVWS 377
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
T + ++TL H ++ + + RD L+VS S D R+WD G CL+ L + V
Sbjct: 378 TSTCEFVRTLNGHKRGIACLQY-RD-RLVVSGSSDNTIRLWDIECGACLRVL-EGHEELV 434
Query: 200 SFVKFSPNGKYILAATLDNTLKLWDSKV-VTPAIICST 236
++F + K I++ D +K+WD + + P ST
Sbjct: 435 RCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPAST 470
Score = 226 (84.6 bits), Expect = 5.6e-18, P = 5.6e-18
Identities = 57/202 (28%), Positives = 112/202 (55%)
Query: 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV 85
++K V +++ + E + S D IKIW + K ++GH G S + D R++V
Sbjct: 227 NSKGVYCLQY--DDEKIISGLRDNSIKIWDKTSLECLKVLTGHT-G-SVLCLQYDERVIV 282
Query: 86 SGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 145
+GS D T+++W++++G+ L TL H+ V F+ + L+V+ S D S+ +WD+ +
Sbjct: 283 TGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKDRSIAVWDMASATD 340
Query: 146 L---KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 202
+ + L H V+ V F D IVS+S D ++W T++ + ++TL + ++ +
Sbjct: 341 ITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTL-NGHKRGIACL 397
Query: 203 KFSPNGKYILAATLDNTLKLWD 224
++ + +++ + DNT++LWD
Sbjct: 398 QY--RDRLVVSGSSDNTIRLWD 417
>DICTYBASE|DDB_G0278353 [details] [associations]
symbol:smu1 "suppressor of mec-8 and unc-52-like
protein" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
dictyBase:DDB_G0278353 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR EMBL:AAFI02000023
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 HSSP:P26449
PROSITE:PS50897 KO:K13111 OMA:NGHWDTV RefSeq:XP_642306.2
ProteinModelPortal:Q54Y96 EnsemblProtists:DDB0233537 GeneID:8621512
KEGG:ddi:DDB_G0278353 ProtClustDB:CLSZ2430773 Uniprot:Q54Y96
Length = 530
Score = 304 (112.1 bits), Expect = 1.6e-26, P = 1.6e-26
Identities = 66/184 (35%), Positives = 102/184 (55%)
Query: 18 VLKFTLAGHTK-AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG--------H 68
VL T+ + K ++KFSP+ ++L + S D I++W GK K+++ H
Sbjct: 215 VLDKTIKFNNKNKPETIKFSPDSKYLLTGSMDGFIEVWDYNTGKLSKSLAYQSNDDFMMH 274
Query: 69 KLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLK-GHSNYVFCCNFNPQSNLIV 127
I +A+S D L +GS D +K+W++ SGKCL+ + H+N V C F+ S I+
Sbjct: 275 DDAILCIAFSKDGEFLATGSLDNKIKVWQIKSGKCLRKFEPAHTNGVTCLQFSRNSTQIL 334
Query: 128 SGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC 187
SGSFD S++I +++GK LK H V+ FN D ++S S DG +IWD S C
Sbjct: 335 SGSFDSSLKIHGLKSGKALKIFRGHQSFVNDCCFNHDEDRVISCSSDGKIKIWDAKSSDC 394
Query: 188 LKTL 191
L+T+
Sbjct: 395 LQTI 398
Score = 251 (93.4 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 64/206 (31%), Positives = 100/206 (48%)
Query: 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-FEKTISGHKLGISDVAWSSDSRLL 84
H A+ + FS +GE+LA+ S D IK+W GK K H G++ + +S +S +
Sbjct: 274 HDDAILCIAFSKDGEFLATGSLDNKIKVWQIKSGKCLRKFEPAHTNGVTCLQFSRNSTQI 333
Query: 85 VSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK 144
+SGS D +LKI L SGK LK +GH ++V C FN + ++S S D ++IWD ++
Sbjct: 334 LSGSFDSSLKIHGLKSGKALKIFRGHQSFVNDCCFNHDEDRVISCSSDGKIKIWDAKSSD 393
Query: 145 CLKTL-PAHSDPVSAVHFNRDGSLIVSSSYDGLCR-----IWDTASGQCLKTLIDDDNPP 198
CL+T+ P V + L+ + + +C I S KT +++
Sbjct: 394 CLQTITPTSVVTVRDISIRSITILLKNPEFLLVCNSSQISIVSMKSQTISKTFTSENSKT 453
Query: 199 VSFVKFSPNGKYILAATLDNTLKLWD 224
SP Y+ A DN L +D
Sbjct: 454 FLVCTLSPLQNYLYAVDEDNILYTFD 479
Score = 232 (86.7 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 50/175 (28%), Positives = 97/175 (55%)
Query: 62 EKTIS-GHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSN-------- 112
+KTI +K + +S DS+ L++GS D +++W+ ++GK K+L SN
Sbjct: 217 DKTIKFNNKNKPETIKFSPDSKYLLTGSMDGFIEVWDYNTGKLSKSLAYQSNDDFMMHDD 276
Query: 113 YVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTL-PAHSDPVSAVHFNRDGSLIVSS 171
+ C F+ + +GS D +++W +++GKCL+ PAH++ V+ + F+R+ + I+S
Sbjct: 277 AILCIAFSKDGEFLATGSLDNKIKVWQIKSGKCLRKFEPAHTNGVTCLQFSRNSTQILSG 336
Query: 172 SYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSK 226
S+D +I SG+ LK + V+ F+ + +++ + D +K+WD+K
Sbjct: 337 SFDSSLKIHGLKSGKALK-IFRGHQSFVNDCCFNHDEDRVISCSSDGKIKIWDAK 390
Score = 114 (45.2 bits), Expect = 0.00054, P = 0.00054
Identities = 38/167 (22%), Positives = 72/167 (43%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKL-GISDVAWSSDSRL 83
GH V+ F+ + + + S S+D IKIW A +TI+ + + D++ S + L
Sbjct: 358 GHQSFVNDCCFNHDEDRVISCSSDGKIKIWDAKSSDCLQTITPTSVVTVRDISIRSITIL 417
Query: 84 LVSGS-----DDKTLKIWELSSGKCLKTLKGHSNYVFC-CNFNPQSNLIVSGSFDESVRI 137
L + + + I + S KT ++ F C +P N + + D +
Sbjct: 418 LKNPEFLLVCNSSQISIVSMKSQTISKTFTSENSKTFLVCTLSPLQNYLYAVDEDNILYT 477
Query: 138 WDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 184
+D +G L H V ++ + +L+ ++ D L +IW + S
Sbjct: 478 FDFNSGSLLNKFKIHDQEVISISHHPTKNLLATTGSDCLLKIWKSNS 524
>UNIPROTKB|F1PBF1 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 KO:K03362 GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AAEX03003014 RefSeq:XP_866627.1
ProteinModelPortal:F1PBF1 Ensembl:ENSCAFT00000026752 GeneID:479291
KEGG:cfa:479291 Uniprot:F1PBF1
Length = 542
Score = 304 (112.1 bits), Expect = 1.7e-26, P = 1.7e-26
Identities = 72/222 (32%), Positives = 121/222 (54%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW---GAYDGKFEKTISGHKLGISDVAWS 78
TL H +AV ++FS NG + + S D+ I +W A D + + GH+ ++ V +
Sbjct: 315 TLIHHNEAVLHLRFS-NG-LMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF- 371
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
D + +VS S D+T+K+W S+ + ++TL GH + C + + L+VSGS D ++R+W
Sbjct: 372 -DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLW 428
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT---------ASGQCLK 189
D+ G CL+ L H + V + F D IVS +YDG ++WD AS CL+
Sbjct: 429 DIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLR 486
Query: 190 TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPA 231
TL++ V ++F I++++ D+T+ +WD V P+
Sbjct: 487 TLVEHSGR-VFRLQFDEF--QIISSSHDDTILIWDFLNVPPS 525
Score = 289 (106.8 bits), Expect = 7.9e-25, P = 7.9e-25
Identities = 63/172 (36%), Positives = 100/172 (58%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L+ L GH AV+ V F + +++ S+S D+ IK+W +F +T++GHK GI+ + +
Sbjct: 355 LRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR 412
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
RL+VSGS D T+++W++ G CL+ L+GH V C F+ + IVSG++D +++W
Sbjct: 413 D--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVW 468
Query: 139 DVRTGK---------CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181
D++ CL+TL HS V + F D I+SSS+D IWD
Sbjct: 469 DLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIWD 518
Score = 249 (92.7 bits), Expect = 1.9e-20, P = 1.9e-20
Identities = 54/148 (36%), Positives = 87/148 (58%)
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
D ++SG D ++KIW+ +S +CLK L GH+ V C ++ + +IV+GS D +VR+WD
Sbjct: 249 DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDER--VIVTGSSDSTVRVWD 306
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ--CLKTLIDDDNP 197
V TG+ L TL H++ V +H L+V+ S D +WD AS L+ ++
Sbjct: 307 VNTGEVLNTLIHHNEAV--LHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRA 364
Query: 198 PVSFVKFSPNGKYILAATLDNTLKLWDS 225
V+ V F + KYI++A+ D T+K+W +
Sbjct: 365 AVNVVDF--DDKYIVSASGDRTIKVWST 390
Score = 230 (86.0 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 58/218 (26%), Positives = 112/218 (51%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
L GHT +V +++ + + S+D +++W G+ T+ H + + +S+
Sbjct: 276 LTGHTGSVLCLQYDERV--IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG-- 331
Query: 83 LLVSGSDDKTLKIWELSSGKCL---KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
L+V+ S D+++ +W+++S + + L GH V +F+ + IVS S D ++++W
Sbjct: 332 LMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIKVWS 389
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
T + ++TL H ++ + + RD L+VS S D R+WD G CL+ L + V
Sbjct: 390 TSTCEFVRTLNGHKRGIACLQY-RD-RLVVSGSSDNTIRLWDIECGACLRVL-EGHEELV 446
Query: 200 SFVKFSPNGKYILAATLDNTLKLWDSKV-VTPAIICST 236
++F + K I++ D +K+WD + + P ST
Sbjct: 447 RCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPAST 482
Score = 226 (84.6 bits), Expect = 5.9e-18, P = 5.9e-18
Identities = 57/202 (28%), Positives = 112/202 (55%)
Query: 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV 85
++K V +++ + E + S D IKIW + K ++GH G S + D R++V
Sbjct: 239 NSKGVYCLQY--DDEKIISGLRDNSIKIWDKTSLECLKVLTGHT-G-SVLCLQYDERVIV 294
Query: 86 SGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 145
+GS D T+++W++++G+ L TL H+ V F+ + L+V+ S D S+ +WD+ +
Sbjct: 295 TGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKDRSIAVWDMASATD 352
Query: 146 L---KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 202
+ + L H V+ V F D IVS+S D ++W T++ + ++TL + ++ +
Sbjct: 353 ITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTL-NGHKRGIACL 409
Query: 203 KFSPNGKYILAATLDNTLKLWD 224
++ + +++ + DNT++LWD
Sbjct: 410 QY--RDRLVVSGSSDNTIRLWD 429
>UNIPROTKB|Q9UKB1 [details] [associations]
symbol:FBXW11 "F-box/WD repeat-containing protein 11"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=NAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA;NAS] [GO:0016567
"protein ubiquitination" evidence=IDA;NAS] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IDA] [GO:0006470 "protein
dephosphorylation" evidence=ISS] [GO:0042753 "positive regulation
of circadian rhythm" evidence=ISS] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0031648 "protein destabilization"
evidence=IMP] [GO:0045862 "positive regulation of proteolysis"
evidence=IMP] [GO:0005813 "centrosome" evidence=IDA] [GO:0005829
"cytosol" evidence=ISS;TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 Reactome:REACT_6900
GO:GO:0045892 GO:GO:0045893
Pathway_Interaction_DB:wnt_canonical_pathway
Pathway_Interaction_DB:ps1pathway GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862
Pathway_Interaction_DB:hedgehog_glipathway GO:GO:0000209
Pathway_Interaction_DB:hdac_classi_pathway
Pathway_Interaction_DB:nfkappabatypicalpathway
Pathway_Interaction_DB:nfkappabcanonicalpathway GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753 HOGENOM:HOG000006638
HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M EMBL:AF176022
EMBL:AB033279 EMBL:AB033280 EMBL:AB033281 EMBL:AB014596
EMBL:AK314999 EMBL:BC026213 IPI:IPI00301283 IPI:IPI00306671
IPI:IPI00328796 RefSeq:NP_036432.2 RefSeq:NP_387448.2
RefSeq:NP_387449.2 UniGene:Hs.484138 ProteinModelPortal:Q9UKB1
SMR:Q9UKB1 DIP:DIP-27593N IntAct:Q9UKB1 MINT:MINT-120522
STRING:Q9UKB1 PhosphoSite:Q9UKB1 DMDM:13124267 PRIDE:Q9UKB1
DNASU:23291 Ensembl:ENST00000265094 Ensembl:ENST00000296933
Ensembl:ENST00000393802 GeneID:23291 KEGG:hsa:23291 UCSC:uc003mbl.1
UCSC:uc003mbm.1 UCSC:uc003mbn.1 CTD:23291 GeneCards:GC05M171288
HGNC:HGNC:13607 MIM:605651 neXtProt:NX_Q9UKB1 PharmGKB:PA28050
InParanoid:Q9UKB1 OMA:FDQWSEA PhylomeDB:Q9UKB1
Pathway_Interaction_DB:nfkappabalternativepathway GenomeRNAi:23291
NextBio:45108 ArrayExpress:Q9UKB1 Bgee:Q9UKB1 CleanEx:HS_FBXW11
Genevestigator:Q9UKB1 GermOnline:ENSG00000072803 Uniprot:Q9UKB1
Length = 542
Score = 304 (112.1 bits), Expect = 1.7e-26, P = 1.7e-26
Identities = 72/222 (32%), Positives = 121/222 (54%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW---GAYDGKFEKTISGHKLGISDVAWS 78
TL H +AV ++FS NG + + S D+ I +W A D + + GH+ ++ V +
Sbjct: 315 TLIHHNEAVLHLRFS-NG-LMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF- 371
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
D + +VS S D+T+K+W S+ + ++TL GH + C + + L+VSGS D ++R+W
Sbjct: 372 -DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLW 428
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT---------ASGQCLK 189
D+ G CL+ L H + V + F D IVS +YDG ++WD AS CL+
Sbjct: 429 DIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLR 486
Query: 190 TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPA 231
TL++ V ++F I++++ D+T+ +WD V P+
Sbjct: 487 TLVEHSGR-VFRLQFDEF--QIISSSHDDTILIWDFLNVPPS 525
Score = 289 (106.8 bits), Expect = 7.9e-25, P = 7.9e-25
Identities = 63/172 (36%), Positives = 100/172 (58%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L+ L GH AV+ V F + +++ S+S D+ IK+W +F +T++GHK GI+ + +
Sbjct: 355 LRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR 412
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
RL+VSGS D T+++W++ G CL+ L+GH V C F+ + IVSG++D +++W
Sbjct: 413 D--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVW 468
Query: 139 DVRTGK---------CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181
D++ CL+TL HS V + F D I+SSS+D IWD
Sbjct: 469 DLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIWD 518
Score = 249 (92.7 bits), Expect = 1.9e-20, P = 1.9e-20
Identities = 54/148 (36%), Positives = 87/148 (58%)
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
D ++SG D ++KIW+ +S +CLK L GH+ V C ++ + +IV+GS D +VR+WD
Sbjct: 249 DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDER--VIVTGSSDSTVRVWD 306
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ--CLKTLIDDDNP 197
V TG+ L TL H++ V +H L+V+ S D +WD AS L+ ++
Sbjct: 307 VNTGEVLNTLIHHNEAV--LHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRA 364
Query: 198 PVSFVKFSPNGKYILAATLDNTLKLWDS 225
V+ V F + KYI++A+ D T+K+W +
Sbjct: 365 AVNVVDF--DDKYIVSASGDRTIKVWST 390
Score = 230 (86.0 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 58/218 (26%), Positives = 112/218 (51%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
L GHT +V +++ + + S+D +++W G+ T+ H + + +S+
Sbjct: 276 LTGHTGSVLCLQYDERV--IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG-- 331
Query: 83 LLVSGSDDKTLKIWELSSGKCL---KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
L+V+ S D+++ +W+++S + + L GH V +F+ + IVS S D ++++W
Sbjct: 332 LMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIKVWS 389
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
T + ++TL H ++ + + RD L+VS S D R+WD G CL+ L + V
Sbjct: 390 TSTCEFVRTLNGHKRGIACLQY-RD-RLVVSGSSDNTIRLWDIECGACLRVL-EGHEELV 446
Query: 200 SFVKFSPNGKYILAATLDNTLKLWDSKV-VTPAIICST 236
++F + K I++ D +K+WD + + P ST
Sbjct: 447 RCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPAST 482
Score = 226 (84.6 bits), Expect = 5.9e-18, P = 5.9e-18
Identities = 57/202 (28%), Positives = 112/202 (55%)
Query: 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV 85
++K V +++ + E + S D IKIW + K ++GH G S + D R++V
Sbjct: 239 NSKGVYCLQY--DDEKIISGLRDNSIKIWDKTSLECLKVLTGHT-G-SVLCLQYDERVIV 294
Query: 86 SGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 145
+GS D T+++W++++G+ L TL H+ V F+ + L+V+ S D S+ +WD+ +
Sbjct: 295 TGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKDRSIAVWDMASATD 352
Query: 146 L---KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 202
+ + L H V+ V F D IVS+S D ++W T++ + ++TL + ++ +
Sbjct: 353 ITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTL-NGHKRGIACL 409
Query: 203 KFSPNGKYILAATLDNTLKLWD 224
++ + +++ + DNT++LWD
Sbjct: 410 QY--RDRLVVSGSSDNTIRLWD 429
>MGI|MGI:2144023 [details] [associations]
symbol:Fbxw11 "F-box and WD-40 domain protein 11"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=ISO;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006470
"protein dephosphorylation" evidence=IDA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO;IDA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO;IMP] [GO:0031648 "protein
destabilization" evidence=ISO] [GO:0042347 "negative regulation of
NF-kappaB import into nucleus" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048511 "rhythmic process"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
MGI:MGI:2144023 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 EMBL:AL669951 GO:GO:0042753
EMBL:AL669844 HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362
OrthoDB:EOG4F1X2M GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AY038079 EMBL:AK041532 EMBL:AK149139 EMBL:AK152181
EMBL:AK160086 EMBL:AK166226 EMBL:AK168667 EMBL:BC034261
IPI:IPI00473301 IPI:IPI00474016 IPI:IPI00515142 IPI:IPI00969335
RefSeq:NP_001258276.1 RefSeq:NP_001258277.1 RefSeq:NP_001258278.1
RefSeq:NP_598776.1 UniGene:Mm.28017 UniGene:Mm.474118
ProteinModelPortal:Q5SRY7 SMR:Q5SRY7 DIP:DIP-59921N STRING:Q5SRY7
PhosphoSite:Q5SRY7 PRIDE:Q5SRY7 Ensembl:ENSMUST00000076383
Ensembl:ENSMUST00000093205 Ensembl:ENSMUST00000109366 GeneID:103583
KEGG:mmu:103583 UCSC:uc007ijx.1 UCSC:uc007ijy.1 UCSC:uc007ijz.1
UCSC:uc007ika.1 InParanoid:Q923H0 ChiTaRS:FBXW11 NextBio:356027
Bgee:Q5SRY7 Genevestigator:Q5SRY7 Uniprot:Q5SRY7
Length = 542
Score = 304 (112.1 bits), Expect = 1.7e-26, P = 1.7e-26
Identities = 72/222 (32%), Positives = 121/222 (54%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW---GAYDGKFEKTISGHKLGISDVAWS 78
TL H +AV ++FS NG + + S D+ I +W A D + + GH+ ++ V +
Sbjct: 315 TLIHHNEAVLHLRFS-NG-LMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF- 371
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
D + +VS S D+T+K+W S+ + ++TL GH + C + + L+VSGS D ++R+W
Sbjct: 372 -DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLW 428
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT---------ASGQCLK 189
D+ G CL+ L H + V + F D IVS +YDG ++WD AS CL+
Sbjct: 429 DIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLR 486
Query: 190 TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPA 231
TL++ V ++F I++++ D+T+ +WD V P+
Sbjct: 487 TLVEHSGR-VFRLQFDEF--QIISSSHDDTILIWDFLNVPPS 525
Score = 289 (106.8 bits), Expect = 7.9e-25, P = 7.9e-25
Identities = 63/172 (36%), Positives = 100/172 (58%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L+ L GH AV+ V F + +++ S+S D+ IK+W +F +T++GHK GI+ + +
Sbjct: 355 LRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR 412
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
RL+VSGS D T+++W++ G CL+ L+GH V C F+ + IVSG++D +++W
Sbjct: 413 D--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVW 468
Query: 139 DVRTGK---------CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181
D++ CL+TL HS V + F D I+SSS+D IWD
Sbjct: 469 DLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIWD 518
Score = 250 (93.1 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 55/148 (37%), Positives = 87/148 (58%)
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
D ++SG D ++KIW+ SS +CLK L GH+ V C ++ + +IV+GS D +VR+WD
Sbjct: 249 DDDKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYDER--VIVTGSSDSTVRVWD 306
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ--CLKTLIDDDNP 197
V TG+ L TL H++ V +H L+V+ S D +WD AS L+ ++
Sbjct: 307 VNTGEVLNTLIHHNEAV--LHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRA 364
Query: 198 PVSFVKFSPNGKYILAATLDNTLKLWDS 225
V+ V F + KYI++A+ D T+K+W +
Sbjct: 365 AVNVVDF--DDKYIVSASGDRTIKVWST 390
Score = 230 (86.0 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 58/218 (26%), Positives = 112/218 (51%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
L GHT +V +++ + + S+D +++W G+ T+ H + + +S+
Sbjct: 276 LTGHTGSVLCLQYDERV--IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG-- 331
Query: 83 LLVSGSDDKTLKIWELSSGKCL---KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
L+V+ S D+++ +W+++S + + L GH V +F+ + IVS S D ++++W
Sbjct: 332 LMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIKVWS 389
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
T + ++TL H ++ + + RD L+VS S D R+WD G CL+ L + V
Sbjct: 390 TSTCEFVRTLNGHKRGIACLQY-RD-RLVVSGSSDNTIRLWDIECGACLRVL-EGHEELV 446
Query: 200 SFVKFSPNGKYILAATLDNTLKLWDSKV-VTPAIICST 236
++F + K I++ D +K+WD + + P ST
Sbjct: 447 RCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPAST 482
Score = 223 (83.6 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 56/202 (27%), Positives = 112/202 (55%)
Query: 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV 85
++K V +++ + + + S D IKIW + K ++GH G S + D R++V
Sbjct: 239 NSKGVYCLQY--DDDKIISGLRDNSIKIWDKSSLECLKVLTGHT-G-SVLCLQYDERVIV 294
Query: 86 SGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 145
+GS D T+++W++++G+ L TL H+ V F+ + L+V+ S D S+ +WD+ +
Sbjct: 295 TGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKDRSIAVWDMASATD 352
Query: 146 L---KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 202
+ + L H V+ V F D IVS+S D ++W T++ + ++TL + ++ +
Sbjct: 353 ITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTL-NGHKRGIACL 409
Query: 203 KFSPNGKYILAATLDNTLKLWD 224
++ + +++ + DNT++LWD
Sbjct: 410 QY--RDRLVVSGSSDNTIRLWD 429
>TAIR|locus:2012971 [details] [associations]
symbol:AT1G71840 "AT1G71840" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0005829 "cytosol" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684 GO:GO:0005829
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 HOGENOM:HOG000261676 OMA:VWSFEVG HSSP:P16649
EMBL:AY080732 EMBL:BT001964 IPI:IPI00538190 RefSeq:NP_177329.2
UniGene:At.44000 ProteinModelPortal:Q8RXQ4 SMR:Q8RXQ4 IntAct:Q8RXQ4
PRIDE:Q8RXQ4 EnsemblPlants:AT1G71840.1 GeneID:843514
KEGG:ath:AT1G71840 TAIR:At1g71840 InParanoid:Q8RXQ4
PhylomeDB:Q8RXQ4 ProtClustDB:CLSN2680639 ArrayExpress:Q8RXQ4
Genevestigator:Q8RXQ4 Uniprot:Q8RXQ4
Length = 407
Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 72/218 (33%), Positives = 115/218 (52%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
L GH +VS + FS +G+ LAS D +++I+ A G + + G GI V W
Sbjct: 109 LPGHKDSVSCLAFSYDGQLLASGGLDGVVQIFDASSGTLKCVLDGPGAGIEWVRWHPRGH 168
Query: 83 LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 142
++++GS+D +L +W L GH+ V C +F P LI +GS D S+ +W+ +T
Sbjct: 169 IVLAGSEDCSLWMWNADKEAYLNMFSGHNLNVTCGDFTPDGKLICTGSDDASLIVWNPKT 228
Query: 143 GKCL---KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
+ + K P H++ ++ + N + SL +S S DG I + +G+ + +L + V
Sbjct: 229 CESIHIVKGHPYHTEGLTCLDINSNSSLAISGSKDGSVHIVNIVTGKVVSSL-NSHTDSV 287
Query: 200 SFVKFSPNGKYI-LAAT--LDNTLKLWDSKVVTPAIIC 234
VKFSP+ I LAAT +D L +WD + TP IC
Sbjct: 288 ECVKFSPSSATIPLAATGGMDKKLIIWDLQHSTPRFIC 325
Score = 241 (89.9 bits), Expect = 5.1e-20, P = 5.1e-20
Identities = 59/213 (27%), Positives = 105/213 (49%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
LK L G + V++ P G + + S D + +W A + SGH L ++ ++
Sbjct: 147 LKCVLDGPGAGIEWVRWHPRGHIVLAGSEDCSLWMWNADKEAYLNMFSGHNLNVTCGDFT 206
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNY---VFCCNFNPQSNLIVSGSFDESV 135
D +L+ +GSDD +L +W + + + +KGH + + C + N S+L +SGS D SV
Sbjct: 207 PDGKLICTGSDDASLIVWNPKTCESIHIVKGHPYHTEGLTCLDINSNSSLAISGSKDGSV 266
Query: 136 RIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCR---IWDTASGQCLKTLI 192
I ++ TGK + +L +H+D V V F+ + I ++ G+ + IWD I
Sbjct: 267 HIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIPLAATGGMDKKLIIWDLQHST--PRFI 324
Query: 193 DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225
+ V+ + + KY+ + T+ +WDS
Sbjct: 325 CEHEEGVTSLTWIGTSKYLATGCANGTVSIWDS 357
Score = 217 (81.4 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 52/208 (25%), Positives = 106/208 (50%)
Query: 24 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKL---GISDVAWSSD 80
+GH V+ F+P+G+ + + S D + +W + + GH G++ + +S+
Sbjct: 194 SGHNLNVTCGDFTPDGKLICTGSDDASLIVWNPKTCESIHIVKGHPYHTEGLTCLDINSN 253
Query: 81 SRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLI---VSGSFDESVRI 137
S L +SGS D ++ I + +GK + +L H++ V C F+P S I +G D+ + I
Sbjct: 254 SSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIPLAATGGMDKKLII 313
Query: 138 WDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 197
WD++ + + H + V+++ + + + +G IWD+ G C+ T +
Sbjct: 314 WDLQHSTP-RFICEHEEGVTSLTWIGTSKYLATGCANGTVSIWDSLLGNCVHTYHGHQDA 372
Query: 198 PVSFVKFSPNGKYILAATLDNTLKLWDS 225
V + S N +I++ ++DNT ++++S
Sbjct: 373 -VQAISVSTNTDFIVSVSVDNTARVFES 399
Score = 188 (71.2 bits), Expect = 4.0e-14, P = 4.0e-14
Identities = 37/121 (30%), Positives = 65/121 (53%)
Query: 106 TLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRD 164
T GH ++ +P + L+ +G D+ +W + G LP H D VS + F+ D
Sbjct: 65 TFTGHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFSYD 124
Query: 165 GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
G L+ S DG+ +I+D +SG LK ++D + +V++ P G +LA + D +L +W+
Sbjct: 125 GQLLASGGLDGVVQIFDASSGT-LKCVLDGPGAGIEWVRWHPRGHIVLAGSEDCSLWMWN 183
Query: 225 S 225
+
Sbjct: 184 A 184
Score = 177 (67.4 bits), Expect = 6.5e-13, P = 6.5e-13
Identities = 45/161 (27%), Positives = 78/161 (48%)
Query: 22 TLAGHTKAVSSVKFSPNGEWL-ASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 80
T GH + ++ SP L A+ D +W +G + + GHK +S +A+S D
Sbjct: 65 TFTGHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFSYD 124
Query: 81 SRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 140
+LL SG D ++I++ SSG L G + ++P+ +++++GS D S+ +W+
Sbjct: 125 GQLLASGGLDGVVQIFDASSGTLKCVLDGPGAGIEWVRWHPRGHIVLAGSEDCSLWMWNA 184
Query: 141 RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181
L H+ V+ F DG LI + S D +W+
Sbjct: 185 DKEAYLNMFSGHNLNVTCGDFTPDGKLICTGSDDASLIVWN 225
Score = 162 (62.1 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 36/121 (29%), Positives = 62/121 (51%)
Query: 22 TLAGHTKAVSSVKFSPNGEWL---ASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
+L HT +V VKFSP+ + A+ DK + IW + I H+ G++ + W
Sbjct: 279 SLNSHTDSVECVKFSPSSATIPLAATGGMDKKLIIWDLQHST-PRFICEHEEGVTSLTWI 337
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
S+ L +G + T+ IW+ G C+ T GH + V + + ++ IVS S D + R++
Sbjct: 338 GTSKYLATGCANGTVSIWDSLLGNCVHTYHGHQDAVQAISVSTNTDFIVSVSVDNTARVF 397
Query: 139 D 139
+
Sbjct: 398 E 398
Score = 159 (61.0 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 43/164 (26%), Positives = 72/164 (43%)
Query: 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR--- 82
HT+ ++ + + N S S D + I GK +++ H + V +S S
Sbjct: 241 HTEGLTCLDINSNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIP 300
Query: 83 LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 142
L +G DK L IW+L + + H V + S + +G + +V IWD
Sbjct: 301 LAATGGMDKKLIIWDLQHSTP-RFICEHEEGVTSLTWIGTSKYLATGCANGTVSIWDSLL 359
Query: 143 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 186
G C+ T H D V A+ + + IVS S D R+++++ Q
Sbjct: 360 GNCVHTYHGHQDAVQAISVSTNTDFIVSVSVDNTARVFESSEFQ 403
>UNIPROTKB|Q9BRX9 [details] [associations]
symbol:WDR83 "WD repeat domain-containing protein 83"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;IDA] [GO:0000375 "RNA
splicing, via transesterification reactions" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH471106 GO:GO:0000398 GO:GO:0071013 UniGene:Hs.657204
HOGENOM:HOG000091642 CTD:84292 HOVERGEN:HBG105288 KO:K13124
OrthoDB:EOG4ZCT4V OMA:CKQGAVR EMBL:AK223195 EMBL:AK314164
EMBL:BC005870 IPI:IPI00031581 RefSeq:NP_001093207.1
RefSeq:NP_115708.1 ProteinModelPortal:Q9BRX9 SMR:Q9BRX9
STRING:Q9BRX9 PhosphoSite:Q9BRX9 DMDM:74761224 PRIDE:Q9BRX9
DNASU:84292 Ensembl:ENST00000242796 Ensembl:ENST00000418543
GeneID:84292 KEGG:hsa:84292 UCSC:uc002mue.4 GeneCards:GC19P012777
HGNC:HGNC:32672 HPA:HPA042629 HPA:HPA042838 neXtProt:NX_Q9BRX9
PharmGKB:PA165394765 InParanoid:Q9BRX9 PhylomeDB:Q9BRX9
ChiTaRS:WDR83 GenomeRNAi:84292 NextBio:73931 ArrayExpress:Q9BRX9
Bgee:Q9BRX9 Genevestigator:Q9BRX9 GermOnline:ENSG00000123154
Uniprot:Q9BRX9
Length = 315
Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 67/198 (33%), Positives = 112/198 (56%)
Query: 29 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGS 88
AV +V+F+ +G + + +DK +K+W G +T SGH + D A S D+ L SG
Sbjct: 27 AVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSFDNSSLCSGG 86
Query: 89 DDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC--L 146
DK + +W+++SG+ ++ +GH+ V FN ++ +I+SGS D S+R WD R+ + +
Sbjct: 87 GDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSIRCWDCRSRRPEPV 146
Query: 147 KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP 206
+TL D VS+V + D I++ S DG R +D GQ + P++ FS
Sbjct: 147 QTLDEARDGVSSVKVS-DHE-ILAGSVDGRVRRYDLRMGQLFSDYVGS---PITCTCFSR 201
Query: 207 NGKYILAATLDNTLKLWD 224
+G+ L ++LD+TL+L D
Sbjct: 202 DGQCTLVSSLDSTLRLLD 219
Score = 200 (75.5 bits), Expect = 6.1e-16, P = 6.1e-16
Identities = 50/167 (29%), Positives = 88/167 (52%)
Query: 63 KTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQ 122
KT+ + + V ++ D ++ DKTLK+W G L+T GH V +
Sbjct: 19 KTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSFD 78
Query: 123 SNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 182
++ + SG D++V +WDV +G+ ++ H+ V+ V FN + ++I+S S D R WD
Sbjct: 79 NSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSIRCWDC 138
Query: 183 ASG--QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKV 227
S + ++TL D+ VS VK S + ILA ++D ++ +D ++
Sbjct: 139 RSRRPEPVQTL-DEARDGVSSVKVSDHE--ILAGSVDGRVRRYDLRM 182
Score = 174 (66.3 bits), Expect = 6.4e-13, P = 6.4e-13
Identities = 52/220 (23%), Positives = 98/220 (44%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
T +GH V S + L S DK + +W G+ + GH ++ V ++ ++
Sbjct: 62 TYSGHGYEVLDAAGSFDNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEA 121
Query: 82 RLLVSGSDDKTLKIWELSSGKC--LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
+++SGS D +++ W+ S + ++TL + V + I++GS D VR +D
Sbjct: 122 TVILSGSIDSSIRCWDCRSRRPEPVQTLDEARDGVSSVKVSDHE--ILAGSVDGRVRRYD 179
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
+R G+ P++ F+RDG + SS D R+ D +G+ L N
Sbjct: 180 LRMGQLFSDYVG--SPITCTCFSRDGQCTLVSSLDSTLRLLDKDTGELLGEYKGHKNQEY 237
Query: 200 SF-VKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTPL 238
S ++++ + D + WD +V A+ + P+
Sbjct: 238 KLDCCLSERDTHVVSCSEDGKVFFWD--LVEGALALALPV 275
Score = 138 (53.6 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 35/129 (27%), Positives = 60/129 (46%)
Query: 102 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHF 161
K LKTL V FN N ++ D+++++W+ G L+T H V
Sbjct: 16 KRLKTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAG 75
Query: 162 NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLK 221
+ D S + S D +WD ASGQ ++ V+ V+F+ IL+ ++D++++
Sbjct: 76 SFDNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGK-VNTVQFNEEATVILSGSIDSSIR 134
Query: 222 LWDSKVVTP 230
WD + P
Sbjct: 135 CWDCRSRRP 143
Score = 117 (46.2 bits), Expect = 0.00010, P = 0.00010
Identities = 46/163 (28%), Positives = 75/163 (46%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG--ISDVAWSS 79
TL VSSVK S + E LA S D ++ YD + + S + +G I+ +S
Sbjct: 148 TLDEARDGVSSVKVSDH-EILAGS-VDGRVR---RYDLRMGQLFSDY-VGSPITCTCFSR 201
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSN--YVFCCNFNPQSNLIVSGSFDESVRI 137
D + + S D TL++ + +G+ L KGH N Y C + + +VS S D V
Sbjct: 202 DGQCTLVSSLDSTLRLLDKDTGELLGEYKGHKNQEYKLDCCLSERDTHVVSCSEDGKVFF 261
Query: 138 WDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 180
WD+ G LP S V ++ ++ ++++ G + W
Sbjct: 262 WDLVEGALALALPVGSGVVQSLAYHPTEPCLLTAM-GGSVQCW 303
>MGI|MGI:2442144 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005669
"transcription factor TFIID complex" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISO] [GO:0016573 "histone acetylation"
evidence=ISO] [GO:0033276 "transcription factor TFTC complex"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:2442144
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0005669 HOVERGEN:HBG050226
KO:K03130 CTD:6877 OrthoDB:EOG469QW7 EMBL:AK031985 EMBL:AK088953
IPI:IPI00223695 RefSeq:NP_796316.2 UniGene:Mm.301522
ProteinModelPortal:Q8C092 SMR:Q8C092 STRING:Q8C092
PhosphoSite:Q8C092 PaxDb:Q8C092 PRIDE:Q8C092 DNASU:226182
GeneID:226182 KEGG:mmu:226182 UCSC:uc008hun.1 HOGENOM:HOG000212424
InParanoid:Q8C092 NextBio:378056 Genevestigator:Q8C092
GermOnline:ENSMUSG00000025049 Uniprot:Q8C092
Length = 801
Score = 308 (113.5 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 60/203 (29%), Positives = 102/203 (50%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
L GH+ V FSP+ +L SSS D +++W GH + D +S
Sbjct: 540 LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGY 599
Query: 83 LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 142
VSG D+ ++W + L+ GH V C ++P SN + +GS D +VR+WDV
Sbjct: 600 YFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRYHPNSNYVATGSADRTVRLWDVLN 659
Query: 143 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 202
G C++ H P+ ++ F+ +G + + + DG +WD G + L V +
Sbjct: 660 GNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGEL-KGHTDTVCSL 718
Query: 203 KFSPNGKYILAATLDNTLKLWDS 225
+FS +G+ + + ++DNT++LWD+
Sbjct: 719 RFSRDGEILASGSMDNTVRLWDA 741
Score = 272 (100.8 bits), Expect = 1.4e-22, P = 1.4e-22
Identities = 51/192 (26%), Positives = 95/192 (49%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLL 84
GH V +FSP G + S D++ ++W + + +GH ++ + +S +
Sbjct: 584 GHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRYHPNSNYV 643
Query: 85 VSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK 144
+GS D+T+++W++ +G C++ GH + F+P + +G+ D V +WD+ G
Sbjct: 644 ATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGL 703
Query: 145 CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG-QCLKTLIDDDNPPVSFVK 203
+ L H+D V ++ F+RDG ++ S S D R+WD + L+T DD +
Sbjct: 704 MVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVKAFEDLET--DDFTTATGHIN 761
Query: 204 FSPNGKYILAAT 215
N + +L T
Sbjct: 762 LPENSQELLLGT 773
Score = 249 (92.7 bits), Expect = 4.2e-20, P = 4.2e-20
Identities = 54/197 (27%), Positives = 93/197 (47%)
Query: 28 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSG 87
K + SVK + + + S D L +I K + GH + ++S D L+S
Sbjct: 503 KKLRSVKQASDLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSS 562
Query: 88 SDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLK 147
S+D T+++W L + CL KGH+ V+ F+P VSG D R+W + L+
Sbjct: 563 SEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLR 622
Query: 148 TLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPN 207
H V+ ++ + + + + S D R+WD +G C++ + P+ + FSPN
Sbjct: 623 IFAGHLADVNCTRYHPNSNYVATGSADRTVRLWDVLNGNCVR-IFTGHKGPIHSLTFSPN 681
Query: 208 GKYILAATLDNTLKLWD 224
G+++ D + LWD
Sbjct: 682 GRFLATGATDGRVLLWD 698
Score = 231 (86.4 bits), Expect = 3.6e-18, P = 3.6e-18
Identities = 57/204 (27%), Positives = 99/204 (48%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 80
+T + +++V + + +A AD +++W +++ KL V +SD
Sbjct: 465 YTFLNAYQGLTAVDVTDDSSLIAGGFADSTVRVW---------SVTPKKL--RSVKQASD 513
Query: 81 SRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 140
L+ SDD +I + + LK L GHS V+ +F+P N ++S S D +VR+W +
Sbjct: 514 LSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSL 573
Query: 141 RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 200
+T CL H+ PV F+ G VS +D + R+W T Q L+ + V+
Sbjct: 574 QTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLR-IFAGHLADVN 632
Query: 201 FVKFSPNGKYILAATLDNTLKLWD 224
++ PN Y+ + D T++LWD
Sbjct: 633 CTRYHPNSNYVATGSADRTVRLWD 656
Score = 118 (46.6 bits), Expect = 0.00033, P = 0.00033
Identities = 38/107 (35%), Positives = 53/107 (49%)
Query: 123 SNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 182
S+LI G D +VR+W V T K L+++ SD SLI S D L RI D
Sbjct: 483 SSLIAGGFADSTVRVWSV-TPKKLRSVKQASDL----------SLIDKESDDVLERIMDE 531
Query: 183 ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVT 229
+ LK L P V FSP+ Y+L+++ D T++LW + T
Sbjct: 532 KTASELKILYGHSGP-VYGASFSPDRNYLLSSSEDGTVRLWSLQTFT 577
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 67/209 (32%), Positives = 112/209 (53%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L + LAGH V S FSP+G +ASSS+D I++W K + GH+ + V++S
Sbjct: 60 LLWRLAGHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFS 119
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
DS+ L SG DK +WE+ SG+ + L GH + + +F+P S+ + +GS+D +V IW
Sbjct: 120 PDSKQLASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIW 179
Query: 139 DVRTGKCLKT---LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD 195
D+R + + L H+ +S + ++ G L+ S S+D +W + L +
Sbjct: 180 DLRASTPVVSYHNLEGHTGNISCLCYSASG-LLASGSWDKTICVWKPTTNN-LPLQLKGH 237
Query: 196 NPPVSFVKFSPNGKYILAATLDNTLKLWD 224
V+ + FSP+ + +A T+K+WD
Sbjct: 238 TIWVNSLAFSPDELKLASAGYSRTVKVWD 266
Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
Identities = 54/200 (27%), Positives = 105/200 (52%)
Query: 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV 85
H V+ FSP+G L ++S D + +WG G+ ++GH+ + +S D RL+
Sbjct: 25 HHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIA 84
Query: 86 SGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 145
S S D ++++W+++ KCL LKGH V +F+P S + SG +D+ +W+V++G+
Sbjct: 85 SSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRR 144
Query: 146 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL--IDDDNPPVSFVK 203
+ L H D + + F+ + + S+D IWD + + + ++ +S +
Sbjct: 145 VHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCLC 204
Query: 204 FSPNGKYILAATLDNTLKLW 223
+S +G + + + D T+ +W
Sbjct: 205 YSASG-LLASGSWDKTICVW 223
Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 53/157 (33%), Positives = 79/157 (50%)
Query: 76 AWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 135
A+S D R L++ SDD + +W SG+ L L GH V C F+P LI S S D S+
Sbjct: 33 AFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIASSSSDHSI 92
Query: 136 RIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD 195
R+WDV KCL L H V V F+ D + S +D +W+ SG+ + L+
Sbjct: 93 RLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRRVHLLVGHC 152
Query: 196 NPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAI 232
+ + FSP + + D+T+ +WD + TP +
Sbjct: 153 DS-IQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVV 188
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 60/196 (30%), Positives = 108/196 (55%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH--KLGISDVAWSSD 80
L GH ++V +V FSP+ + LAS DK +W G+ + GH + SD + +SD
Sbjct: 106 LKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSD 165
Query: 81 SRLLVSGSDDKTLKIWELSSGKCLKT---LKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 137
S L +GS D T+ IW+L + + + L+GH+ + C ++ S L+ SGS+D+++ +
Sbjct: 166 S--LATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCLCYSA-SGLLASGSWDKTICV 222
Query: 138 WDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 197
W T L H+ V+++ F+ D + S+ Y ++WD +G+CL+TL +
Sbjct: 223 WKPTTNNLPLQLKGHTIWVNSLAFSPDELKLASAGYSRTVKVWDCLTGKCLETLKGMLDV 282
Query: 198 PVSFVKFSPNGKYILA 213
+ + F+P+GK +++
Sbjct: 283 AHACI-FTPDGKLLVS 297
Score = 231 (86.4 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 54/153 (35%), Positives = 79/153 (51%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK---FEKTISGHKLGISDVAWSS 79
L GH ++ S FSP + LA+ S D + IW + GH IS + +S+
Sbjct: 148 LVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCLCYSA 207
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
S LL SGS DKT+ +W+ ++ LKGH+ +V F+P + S + +V++WD
Sbjct: 208 -SGLLASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPDELKLASAGYSRTVKVWD 266
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSS 172
TGKCL+TL D A F DG L+VS +
Sbjct: 267 CLTGKCLETLKGMLDVAHACIFTPDGKLLVSGA 299
>UNIPROTKB|F1N575 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:DAAA02061261
EMBL:DAAA02061262 IPI:IPI00905134 Ensembl:ENSBTAT00000048510
ArrayExpress:F1N575 Uniprot:F1N575
Length = 585
Score = 303 (111.7 bits), Expect = 3.0e-26, P = 3.0e-26
Identities = 69/218 (31%), Positives = 110/218 (50%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI--SGHKLGISDVAWSSD 80
L GH V S +F + L S S D I+ W G F T+ GH + D+ S
Sbjct: 334 LRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDL--GSFTNTVLYQGHAYPVWDLDISPH 391
Query: 81 SRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 140
S S S D+T ++W L+ GH V C F+P SN + +GS D++VR+W
Sbjct: 392 SLYFASASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWST 451
Query: 141 RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD-DNPPV 199
+ G ++ H PV ++ F+ +G + S+ D ++WD ASG K L DN +
Sbjct: 452 QQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDN--I 509
Query: 200 SFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTP 237
+ + FSP+ + +A++DN++++WD + + CSTP
Sbjct: 510 TSLTFSPDSSLVASASMDNSVRVWDIR----SSHCSTP 543
Score = 279 (103.3 bits), Expect = 1.2e-23, P = 1.2e-23
Identities = 51/144 (35%), Positives = 82/144 (56%)
Query: 17 YVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA 76
Y L+ AGH V VKF PN +LA+ S DK +++W G + +GH+ + +A
Sbjct: 413 YPLRI-YAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLA 471
Query: 77 WSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 136
+S + + L S +D+ LK+W+L+SG K L+GH++ + F+P S+L+ S S D SVR
Sbjct: 472 FSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLVASASMDNSVR 531
Query: 137 IWDVRTGKCLKTLPAHSDPVSAVH 160
+WD+R+ C S + V+
Sbjct: 532 VWDIRSSHCSTPADGSSSELVGVY 555
Score = 218 (81.8 bits), Expect = 5.1e-17, P = 5.1e-17
Identities = 50/162 (30%), Positives = 79/162 (48%)
Query: 63 KTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQ 122
K + GH + + +DS L+S S+D +++ W+L S +GH+ V+ + +P
Sbjct: 332 KVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPH 391
Query: 123 SNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 182
S S S D + R+W L+ H V V F+ + + + + S D R+W T
Sbjct: 392 SLYFASASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWST 451
Query: 183 ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
G ++ L PV + FSPNGKY+ +A D LKLWD
Sbjct: 452 QQGNSVR-LFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWD 492
Score = 172 (65.6 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 34/102 (33%), Positives = 56/102 (54%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLL 84
GH V S+ FSPNG++LAS+ D+ +K+W G K + GH I+ + +S DS L+
Sbjct: 462 GHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLV 521
Query: 85 VSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLI 126
S S D ++++W++ S C G S+ + SN++
Sbjct: 522 ASASMDNSVRVWDIRSSHCSTPADGSSSELVGVYTGQMSNVL 563
Score = 168 (64.2 bits), Expect = 7.5e-11, P = 7.5e-11
Identities = 48/197 (24%), Positives = 89/197 (45%)
Query: 30 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSD 89
+++ + SP+ + LA+ + IK+W K + H++ +S + + D + D
Sbjct: 267 LNTAEVSPDSKLLAAGFDNSCIKLWSLRSKKLKS--EPHQVDVSRIHLACD---FLEEED 321
Query: 90 DKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTL 149
D+ + G +K L+GH V+ F S+ ++S S D S+R WD+ +
Sbjct: 322 DEDDNL-----GTEMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLY 376
Query: 150 PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK 209
H+ PV + + S+S+D R+W L+ + V VKF PN
Sbjct: 377 QGHAYPVWDLDISPHSLYFASASHDRTARLWSFDRTYPLR-IYAGHLADVDCVKFHPNSN 435
Query: 210 YILAATLDNTLKLWDSK 226
Y+ + D T++LW ++
Sbjct: 436 YLATGSTDKTVRLWSTQ 452
>UNIPROTKB|E1C4U3 [details] [associations]
symbol:E1C4U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:ERQNNQI EMBL:AADN02030830
EMBL:AADN02030831 IPI:IPI00579493 ProteinModelPortal:E1C4U3
Ensembl:ENSGALT00000013413 Uniprot:E1C4U3
Length = 780
Score = 306 (112.8 bits), Expect = 3.0e-26, P = 3.0e-26
Identities = 60/203 (29%), Positives = 101/203 (49%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
L GH+ V FSP+ +L S S D +++W GH + D +S
Sbjct: 519 LYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGY 578
Query: 83 LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 142
VSG D+ ++W + L+ GH V C F+P SN I +GS D +VR+WDV
Sbjct: 579 YFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRTVRLWDVLN 638
Query: 143 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 202
G C++ H P+ ++ F+ +G + + + DG +WD G + L + +
Sbjct: 639 GNCVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGEL-KGHTDTIYAL 697
Query: 203 KFSPNGKYILAATLDNTLKLWDS 225
+FS +G+ + + ++DNT++LWD+
Sbjct: 698 RFSRDGEILASGSMDNTVRLWDA 720
Score = 270 (100.1 bits), Expect = 2.2e-22, P = 2.2e-22
Identities = 51/192 (26%), Positives = 95/192 (49%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLL 84
GH V +FSP G + S D++ ++W + + +GH ++ + +S +
Sbjct: 563 GHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYI 622
Query: 85 VSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK 144
+GS D+T+++W++ +G C++ GH + F+P + +G+ D V +WD+ G
Sbjct: 623 ATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWDIGHGL 682
Query: 145 CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG-QCLKTLIDDDNPPVSFVK 203
+ L H+D + A+ F+RDG ++ S S D R+WD + L+T DD +
Sbjct: 683 MVGELKGHTDTIYALRFSRDGEILASGSMDNTVRLWDAVKAFEDLET--DDFTTATGHIN 740
Query: 204 FSPNGKYILAAT 215
N + +L T
Sbjct: 741 LPENSQDLLLGT 752
Score = 251 (93.4 bits), Expect = 2.5e-20, P = 2.5e-20
Identities = 56/197 (28%), Positives = 93/197 (47%)
Query: 28 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSG 87
K + SVK + + + S D L +I K + GH + ++S D L+S
Sbjct: 482 KKLRSVKAAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGTSFSPDRNYLLSC 541
Query: 88 SDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLK 147
S+D T+++W L + CL KGH+ V+ F+P VSG D R+W + L+
Sbjct: 542 SEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLR 601
Query: 148 TLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPN 207
H V+ F+ + + I + S D R+WD +G C++ + P+ + FSPN
Sbjct: 602 IFAGHLADVTCTRFHPNSNYIATGSADRTVRLWDVLNGNCVR-IFTGHKGPIHSLAFSPN 660
Query: 208 GKYILAATLDNTLKLWD 224
G+++ D + LWD
Sbjct: 661 GRFLATGATDGRVLLWD 677
Score = 225 (84.3 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 57/204 (27%), Positives = 98/204 (48%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 80
+T + +++V + + + AD +++W +++ KL V ++D
Sbjct: 444 YTFLNAYQGLTAVDITDDSSMIVGGFADSTVRVW---------SVTPKKL--RSVKAAAD 492
Query: 81 SRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 140
L+ SDD +I + + LK L GHS V+ +F+P N ++S S D +VR+W +
Sbjct: 493 LSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSL 552
Query: 141 RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 200
+T CL H+ PV F+ G VS +D + R+W T Q L+ + V+
Sbjct: 553 QTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLR-IFAGHLADVT 611
Query: 201 FVKFSPNGKYILAATLDNTLKLWD 224
+F PN YI + D T++LWD
Sbjct: 612 CTRFHPNSNYIATGSADRTVRLWD 635
Score = 122 (48.0 bits), Expect = 0.00011, P = 0.00011
Identities = 40/127 (31%), Positives = 58/127 (45%)
Query: 103 CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFN 162
C T + + S++IV G D +VR+W V T K L+++ A +D
Sbjct: 442 CFYTFLNAYQGLTAVDITDDSSMIVGGFADSTVRVWSV-TPKKLRSVKAAADL------- 493
Query: 163 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 222
SLI S D L RI D + LK L P V FSP+ Y+L+ + D T++L
Sbjct: 494 ---SLIDKESDDVLERIMDEKTASELKILYGHSGP-VYGTSFSPDRNYLLSCSEDGTVRL 549
Query: 223 WDSKVVT 229
W + T
Sbjct: 550 WSLQTFT 556
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 68/214 (31%), Positives = 107/214 (50%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY-DGKFEKTISGHKLGISDVAWSSDS 81
L GH + + +F P GE L SS D+ I IW Y D + +SGH + + ++ D
Sbjct: 51 LEGHEGEIFTAEFHPEGELLLSSGFDRQIYIWQVYEDCENVMAMSGHSGAVMEAHFTPDG 110
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDV 140
+ + S DKTL W++++G+ + KGH N+V + + L+ SGS D +++IWD
Sbjct: 111 SHIFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDA 170
Query: 141 RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 200
R TL + V+AV F G ++S D +IWD L L + ++
Sbjct: 171 RKKHAAHTLESPFQ-VTAVCFGDTGEQVISGGIDNEVKIWDIRKQAVLHHLRGHSDT-IT 228
Query: 201 FVKFSPNGKYILAATLDNTLKLWDSKVVTPAIIC 234
+ SP G +IL +DNTL++WD + P C
Sbjct: 229 GMSLSPEGDFILTNAMDNTLRVWDVRPYAPGERC 262
Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
Identities = 65/223 (29%), Positives = 108/223 (48%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS-DS 81
++GH+ AV F+P+G + + S DK + W G+ ++ GH ++ V S
Sbjct: 94 MSGHSGAVMEAHFTPDGSHIFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRGQ 153
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
+LL SGSDD+T+KIW+ TL+ C F ++SG D V+IWD+R
Sbjct: 154 QLLCSGSDDRTIKIWDARKKHAAHTLESPFQVTAVC-FGDTGEQVISGGIDNEVKIWDIR 212
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT---ASGQ-CLKTLIDDD-N 196
L L HSD ++ + + +G I++++ D R+WD A G+ C+K N
Sbjct: 213 KQAVLHHLRGHSDTITGMSLSPEGDFILTNAMDNTLRVWDVRPYAPGERCVKVFQGHQHN 272
Query: 197 PPVSFVK--FSPNGKYILAATLDNTLKLWDSKVVTPAIICSTP 237
+ ++ +SP I + + D + +WD V T I+ P
Sbjct: 273 FEKNLLRCAWSPGSDKITSGSADRHVYIWD--VNTRRILYKLP 313
Score = 218 (81.8 bits), Expect = 8.9e-18, P = 8.9e-18
Identities = 62/207 (29%), Positives = 97/207 (46%)
Query: 25 GHTKAVSSVKFSPNGEWL-ASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRL 83
GH V+SV+ S G+ L S S D+ IKIW A T+ ++ V +
Sbjct: 138 GHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARKKHAAHTLES-PFQVTAVCFGDTGEQ 196
Query: 84 LVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT- 142
++SG D +KIW++ L L+GHS+ + + +P+ + I++ + D ++R+WDVR
Sbjct: 197 VISGGIDNEVKIWDIRKQAVLHHLRGHSDTITGMSLSPEGDFILTNAMDNTLRVWDVRPY 256
Query: 143 --G-KCLKTLPAHSDPVSA----VHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD 195
G +C+K H ++ I S S D IWD + + L L
Sbjct: 257 APGERCVKVFQGHQHNFEKNLLRCAWSPGSDKITSGSADRHVYIWDVNTRRILYKL-PGH 315
Query: 196 NPPVSFVKFSPNGKYILAATLDNTLKL 222
N V+ V FSP IL+ + D TL L
Sbjct: 316 NGSVNAVDFSPKEPLILSGSSDKTLYL 342
Score = 177 (67.4 bits), Expect = 4.1e-13, P = 4.1e-13
Identities = 43/137 (31%), Positives = 67/137 (48%)
Query: 107 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC--LKTLPAHSDPVSAVHFNRD 164
L+GH +F F+P+ L++S FD + IW V C + + HS V HF D
Sbjct: 51 LEGHEGEIFTAEFHPEGELLLSSGFDRQIYIWQVYED-CENVMAMSGHSGAVMEAHFTPD 109
Query: 165 GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN-TLKLW 223
GS I + S D WD A+GQ + N V+ V+ S G+ +L + D+ T+K+W
Sbjct: 110 GSHIFTCSTDKTLAFWDIATGQRQRRFKGHGNF-VNSVQGSRRGQQLLCSGSDDRTIKIW 168
Query: 224 DSKVVTPAIICSTPLNL 240
D++ A +P +
Sbjct: 169 DARKKHAAHTLESPFQV 185
Score = 167 (63.8 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 36/126 (28%), Positives = 70/126 (55%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGA--Y-DG-KFEKTISGHKLGISD---- 74
L GH+ ++ + SP G+++ +++ D +++W Y G + K GH+
Sbjct: 220 LRGHSDTITGMSLSPEGDFILTNAMDNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLR 279
Query: 75 VAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 134
AWS S + SGS D+ + IW++++ + L L GH+ V +F+P+ LI+SGS D++
Sbjct: 280 CAWSPGSDKITSGSADRHVYIWDVNTRRILYKLPGHNGSVNAVDFSPKEPLILSGSSDKT 339
Query: 135 VRIWDV 140
+ + ++
Sbjct: 340 LYLGEI 345
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 304 (112.1 bits), Expect = 3.8e-26, P = 3.8e-26
Identities = 62/204 (30%), Positives = 109/204 (53%)
Query: 23 LAGHTKAVSSVKFSPN-GEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
+ H+ VSS+ + G LA+ D + IW +++GH + + ++S
Sbjct: 16 IVAHSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSSE 75
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
+V+GS +L++W+L + K L+TL GH + +F+P + SGS D ++++WDVR
Sbjct: 76 ERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVR 135
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 201
C+ H+ V + F+ DG + S+S D ++WD +G+ + T V+
Sbjct: 136 RKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMI-TEFTSHTSAVNV 194
Query: 202 VKFSPNGKYILAA-TLDNTLKLWD 224
V+F PN +Y+LA+ + D T+KLWD
Sbjct: 195 VQFHPN-EYLLASGSADRTVKLWD 217
Score = 286 (105.7 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 58/202 (28%), Positives = 106/202 (52%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
+L GHT AV ++F+ + E + + S +++W K +T+ GHK IS + +
Sbjct: 58 SLTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMG 117
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
L SGS D +K+W++ C+ KGH+ V C F+P + S S D +V++WD+
Sbjct: 118 EYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLI 177
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 201
GK + +H+ V+ V F+ + L+ S S D ++WD + + + + V
Sbjct: 178 AGKMITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWDLEKFNMIGSS-EGETGVVRS 236
Query: 202 VKFSPNGKYILAATLDNTLKLW 223
V F+P+G + + + +NTL+++
Sbjct: 237 VLFNPDGSCLYSGS-ENTLRVY 257
Score = 271 (100.5 bits), Expect = 1.4e-22, P = 1.4e-22
Identities = 58/166 (34%), Positives = 89/166 (53%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GH ++SS+ F P GE+LAS S D IK+W GH + +A+S D
Sbjct: 100 TLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDG 159
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
+ L S SDD T+K+W+L +GK + H++ V F+P L+ SGS D +V++WD+
Sbjct: 160 KWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWDLE 219
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC 187
+ + + V +V FN DGS + S S + L R++ +C
Sbjct: 220 KFNMIGSSEGETGVVRSVLFNPDGSCLYSGSENTL-RVYGWEPDRC 264
Score = 225 (84.3 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 54/183 (29%), Positives = 92/183 (50%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 80
F GHT+AV + FSP+G+WLAS+S D +K+W GK + H ++ V + +
Sbjct: 141 FRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPN 200
Query: 81 SRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 140
LL SGS D+T+K+W+L + + +G + V FNP + + SGS + ++R++
Sbjct: 201 EYLLASGSADRTVKLWDLEKFNMIGSSEGETGVVRSVLFNPDGSCLYSGS-ENTLRVYGW 259
Query: 141 RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC-RIWDT----ASGQCLKTLIDDD 195
+C + VS + + + + VS S+ + + D SG ++ LI D
Sbjct: 260 EPDRCFDVVHVGWGKVSDLAISNNQMIAVSYSHTNVSWYVVDLNRVKKSGSVIQGLIQDK 319
Query: 196 NPP 198
P
Sbjct: 320 PIP 322
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 303 (111.7 bits), Expect = 4.2e-26, P = 4.2e-26
Identities = 63/216 (29%), Positives = 109/216 (50%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
+L GHT V SV+ + E + + S I++W K +T+ GHK I + +
Sbjct: 58 SLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYG 117
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
+ SGS D +K+W++ C+ +GHS V C F+P + S + D +V++WD+
Sbjct: 118 EFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLT 177
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 201
GK + P H+ PV+ V F+ + L+ S S D R WD Q + + I+ + PV
Sbjct: 178 AGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVV-SCIEGEPGPVRS 236
Query: 202 VKFSPNGKYILAATLDNTLKL--WDSKVVTPAIICS 235
V F+P+G + + D+ L++ W+ + ++ S
Sbjct: 237 VLFNPDGCCLYSGCQDS-LRVYGWEPERCFDVVLVS 271
Score = 297 (109.6 bits), Expect = 1.9e-25, P = 1.9e-25
Identities = 58/204 (28%), Positives = 107/204 (52%)
Query: 23 LAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
+ H VSS+ +G LA+ D + +W +++GH + V ++
Sbjct: 16 IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPE 75
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
L+V+GS ++++W+L + K L+TL GH + +F+P + SGS D ++++WD+R
Sbjct: 76 ELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR 135
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 201
C+ HS V + F+ DG + S++ D ++WD +G+ + PV+
Sbjct: 136 RKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEF-PGHTGPVNV 194
Query: 202 VKFSPNGKYILAA-TLDNTLKLWD 224
V+F PN +Y+LA+ + D T++ WD
Sbjct: 195 VEFHPN-EYLLASGSSDRTIRFWD 217
Score = 204 (76.9 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 57/188 (30%), Positives = 92/188 (48%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 80
F GH++AV ++FSP+G+WLAS++ D +K+W GK GH ++ V + +
Sbjct: 141 FRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPN 200
Query: 81 SRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI--W 138
LL SGS D+T++ W+L + + ++G V FNP + SG D S+R+ W
Sbjct: 201 EYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQD-SLRVYGW 259
Query: 139 D---------VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLK 189
+ V GK + L +D + V F++ VSS L R+ T +G +
Sbjct: 260 EPERCFDVVLVSWGK-VADLAVCNDQLIGVAFSQSN---VSSYVVDLTRV--TRTGTVAQ 313
Query: 190 TLIDDDNP 197
+ D P
Sbjct: 314 DPVQDSRP 321
>UNIPROTKB|F1P5E8 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AADN02035964
EMBL:AADN02035965 EMBL:AADN02035966 IPI:IPI00735168
Ensembl:ENSGALT00000003489 ArrayExpress:F1P5E8 Uniprot:F1P5E8
Length = 515
Score = 299 (110.3 bits), Expect = 5.0e-26, P = 5.0e-26
Identities = 71/222 (31%), Positives = 120/222 (54%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW---GAYDGKFEKTISGHKLGISDVAWS 78
TL H +AV ++FS NG + + S D+ I +W D + + GH+ ++ V +
Sbjct: 288 TLIHHNEAVLHLRFS-NG-LMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF- 344
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
D + +VS S D+T+K+W S+ + ++TL GH + C + + L+VSGS D ++R+W
Sbjct: 345 -DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLW 401
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT---------ASGQCLK 189
D+ G CL+ L H + V + F D IVS +YDG ++WD AS CL+
Sbjct: 402 DIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLR 459
Query: 190 TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPA 231
TL++ V ++F I++++ D+T+ +WD V P+
Sbjct: 460 TLVEHSGR-VFRLQFDEF--QIISSSHDDTILIWDFLNVPPS 498
Score = 289 (106.8 bits), Expect = 6.5e-25, P = 6.5e-25
Identities = 63/172 (36%), Positives = 100/172 (58%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L+ L GH AV+ V F + +++ S+S D+ IK+W +F +T++GHK GI+ + +
Sbjct: 328 LRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR 385
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
RL+VSGS D T+++W++ G CL+ L+GH V C F+ + IVSG++D +++W
Sbjct: 386 D--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVW 441
Query: 139 DVRTGK---------CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181
D++ CL+TL HS V + F D I+SSS+D IWD
Sbjct: 442 DLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIWD 491
Score = 247 (92.0 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 54/148 (36%), Positives = 87/148 (58%)
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
D ++SG D ++KIW+ +S +CLK L GH+ V C ++ + +IV+GS D +VR+WD
Sbjct: 222 DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDER--VIVTGSSDSTVRVWD 279
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ--CLKTLIDDDNP 197
V TG+ L TL H++ V +H L+V+ S D +WD AS L+ ++
Sbjct: 280 VNTGEVLNTLIHHNEAV--LHLRFSNGLMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 337
Query: 198 PVSFVKFSPNGKYILAATLDNTLKLWDS 225
V+ V F + KYI++A+ D T+K+W +
Sbjct: 338 AVNVVDF--DDKYIVSASGDRTIKVWST 363
Score = 228 (85.3 bits), Expect = 3.1e-18, P = 3.1e-18
Identities = 58/218 (26%), Positives = 112/218 (51%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
L GHT +V +++ + + S+D +++W G+ T+ H + + +S+
Sbjct: 249 LTGHTGSVLCLQYDERV--IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG-- 304
Query: 83 LLVSGSDDKTLKIWELSSGKCL---KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
L+V+ S D+++ +W+++S + + L GH V +F+ + IVS S D ++++W
Sbjct: 305 LMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIKVWS 362
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
T + ++TL H ++ + + RD L+VS S D R+WD G CL+ L + V
Sbjct: 363 TSTCEFVRTLNGHKRGIACLQY-RD-RLVVSGSSDNTIRLWDIECGACLRVL-EGHEELV 419
Query: 200 SFVKFSPNGKYILAATLDNTLKLWDSKV-VTPAIICST 236
++F + K I++ D +K+WD + + P ST
Sbjct: 420 RCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPAST 455
Score = 224 (83.9 bits), Expect = 8.6e-18, P = 8.6e-18
Identities = 57/202 (28%), Positives = 112/202 (55%)
Query: 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV 85
++K V +++ + E + S D IKIW + K ++GH G S + D R++V
Sbjct: 212 NSKGVYCLQY--DDEKIISGLRDNSIKIWDKTSLECLKVLTGHT-G-SVLCLQYDERVIV 267
Query: 86 SGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 145
+GS D T+++W++++G+ L TL H+ V F+ + L+V+ S D S+ +WD+ +
Sbjct: 268 TGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKDRSIAVWDMASPTD 325
Query: 146 L---KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 202
+ + L H V+ V F D IVS+S D ++W T++ + ++TL + ++ +
Sbjct: 326 ITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTL-NGHKRGIACL 382
Query: 203 KFSPNGKYILAATLDNTLKLWD 224
++ + +++ + DNT++LWD
Sbjct: 383 QY--RDRLVVSGSSDNTIRLWD 402
>UNIPROTKB|O75529 [details] [associations]
symbol:TAF5L "TAF5-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 5L"
species:9606 "Homo sapiens" [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AJ009770
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 EMBL:AL121990 EMBL:CH471098 GO:GO:0003713
GO:GO:0006366 GO:GO:0043966 GO:GO:0030914 GO:GO:0033276
EMBL:AF069736 EMBL:BC041094 IPI:IPI00004325 IPI:IPI00410088
RefSeq:NP_001020418.1 RefSeq:NP_055224.1 UniGene:Hs.270621
ProteinModelPortal:O75529 SMR:O75529 DIP:DIP-28147N IntAct:O75529
STRING:O75529 PhosphoSite:O75529 PaxDb:O75529 PRIDE:O75529
DNASU:27097 Ensembl:ENST00000258281 Ensembl:ENST00000366675
Ensembl:ENST00000366676 GeneID:27097 KEGG:hsa:27097 UCSC:uc001htq.3
UCSC:uc001htr.3 CTD:27097 GeneCards:GC01M229728 HGNC:HGNC:17304
neXtProt:NX_O75529 PharmGKB:PA38223 HOGENOM:HOG000212423
HOVERGEN:HBG050226 InParanoid:O75529 KO:K03130 OMA:YVDSEGP
OrthoDB:EOG4NCMCF PhylomeDB:O75529 ChiTaRS:TAF5L GenomeRNAi:27097
NextBio:49741 ArrayExpress:O75529 Bgee:O75529 CleanEx:HS_TAF5L
Genevestigator:O75529 GermOnline:ENSG00000135801 Uniprot:O75529
Length = 589
Score = 301 (111.0 bits), Expect = 5.1e-26, P = 5.1e-26
Identities = 70/218 (32%), Positives = 109/218 (50%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI--SGHKLGISDVAWSSD 80
L GH V S +F + L S S D I+ W G F T+ GH + D+ S
Sbjct: 338 LRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDL--GSFTNTVLYQGHAYPVWDLDISPY 395
Query: 81 SRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 140
S SGS D+T ++W L+ GH V C F+P SN + +GS D++VR+W
Sbjct: 396 SLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSA 455
Query: 141 RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD-DNPPV 199
+ G ++ H PV ++ F+ +G + S+ D ++WD ASG K L DN +
Sbjct: 456 QQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDN--I 513
Query: 200 SFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTP 237
+ + FSP+ I +A++DN++++WD + CS P
Sbjct: 514 TSLTFSPDSGLIASASMDNSVRVWDIRNT----YCSAP 547
Score = 279 (103.3 bits), Expect = 1.3e-23, P = 1.3e-23
Identities = 53/144 (36%), Positives = 81/144 (56%)
Query: 17 YVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA 76
Y L+ AGH V VKF PN +LA+ S DK +++W A G + +GH+ + +A
Sbjct: 417 YPLRI-YAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLA 475
Query: 77 WSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 136
+S + + L S +D+ LK+W+L+SG K L+GH++ + F+P S LI S S D SVR
Sbjct: 476 FSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSGLIASASMDNSVR 535
Query: 137 IWDVRTGKCLKTLPAHSDPVSAVH 160
+WD+R C S + V+
Sbjct: 536 VWDIRNTYCSAPADGSSSELVGVY 559
Score = 217 (81.4 bits), Expect = 6.6e-17, P = 6.6e-17
Identities = 50/162 (30%), Positives = 79/162 (48%)
Query: 63 KTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQ 122
K + GH + + +DS L+S S+D +++ W+L S +GH+ V+ + +P
Sbjct: 336 KILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPY 395
Query: 123 SNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 182
S SGS D + R+W L+ H V V F+ + + + + S D R+W
Sbjct: 396 SLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSA 455
Query: 183 ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
G ++ L PV + FSPNGKY+ +A D LKLWD
Sbjct: 456 QQGNSVR-LFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWD 496
Score = 170 (64.9 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 48/197 (24%), Positives = 91/197 (46%)
Query: 30 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSD 89
+++ + SP+ + LA+ + IK+W K + H++ +S + + D ++ D
Sbjct: 271 LNTAEISPDSKLLAAGFDNSCIKLWSLRSKKLKS--EPHQVDVSRIHLACD---ILEEED 325
Query: 90 DKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTL 149
D+ + ++G +K L+GH V+ F S+ ++S S D S+R WD+ +
Sbjct: 326 DE-----DDNAGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLY 380
Query: 150 PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK 209
H+ PV + + S S+D R+W L+ + V VKF PN
Sbjct: 381 QGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLR-IYAGHLADVDCVKFHPNSN 439
Query: 210 YILAATLDNTLKLWDSK 226
Y+ + D T++LW ++
Sbjct: 440 YLATGSTDKTVRLWSAQ 456
Score = 166 (63.5 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 33/102 (32%), Positives = 56/102 (54%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLL 84
GH V S+ FSPNG++LAS+ D+ +K+W G K + GH I+ + +S DS L+
Sbjct: 466 GHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSGLI 525
Query: 85 VSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLI 126
S S D ++++W++ + C G S+ + SN++
Sbjct: 526 ASASMDNSVRVWDIRNTYCSAPADGSSSELVGVYTGQMSNVL 567
>CGD|CAL0000293 [details] [associations]
symbol:UTP13 species:5476 "Candida albicans" [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0034388
"Pwp2p-containing subcomplex of 90S preribosome" evidence=IEA]
[GO:0030515 "snoRNA binding" evidence=IEA] [GO:0000472
"endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA
from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480 "endonucleolytic
cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR013934 InterPro:IPR015943
Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0000293 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 EMBL:AACQ01000021 EMBL:AACQ01000022 KO:K14555
RefSeq:XP_720576.1 RefSeq:XP_720704.1 ProteinModelPortal:Q5AGB1
STRING:Q5AGB1 GeneID:3637636 GeneID:3637718 KEGG:cal:CaO19.11744
KEGG:cal:CaO19.4268 Uniprot:Q5AGB1
Length = 799
Score = 304 (112.1 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 66/214 (30%), Positives = 116/214 (54%)
Query: 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 79
++T H K ++S+ SPN E+ A++S DKL K+W G+ + GHK G+ D+ +
Sbjct: 471 EYTRRAHDKDINSIDVSPNDEYFATASYDKLGKVWQTDSGETIGVLKGHKRGLWDINFYK 530
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNF-NPQSNLIVSGSFDESVRIW 138
+L+V+GS DKT+K+W L C KTL+GH+N V F N + ++S D +++W
Sbjct: 531 FDKLIVTGSGDKTIKVWSLLDFSCKKTLEGHTNSVQRVKFFNREHPQLLSCGADGLIKLW 590
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW--DTASGQCLKTL----- 191
D + G+ +K+L H + A+ DG ++ DG W +T K L
Sbjct: 591 DYKQGEIIKSLDNHDQRIWAMDLKNDGEYFTTADADGKLSFWTDNTEEEVKFKELQAKEK 650
Query: 192 IDDDNPPVSFVKFSP-NGKYILAATLDNTLKLWD 224
I+ + +++K + ++LA TLD++++L++
Sbjct: 651 IEQEQSLSNYIKNKDWSNAFLLALTLDHSMRLYN 684
Score = 258 (95.9 bits), Expect = 4.5e-21, P = 4.5e-21
Identities = 61/209 (29%), Positives = 103/209 (49%)
Query: 25 GHTKAVSSVKFSPNG---EWLASSSADKLIKIW------GAYDGKFEKTISGHKLGISDV 75
GH A++++ S + ++L + S D IK W + E T H I+ +
Sbjct: 425 GHAGAITAISLSKSQNEPKFLVTGSTDLTIKKWKIPNTPNSIVKTSEYTRRAHDKDINSI 484
Query: 76 AWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 135
S + + S DK K+W+ SG+ + LKGH ++ NF LIV+GS D+++
Sbjct: 485 DVSPNDEYFATASYDKLGKVWQTDSGETIGVLKGHKRGLWDINFYKFDKLIVTGSGDKTI 544
Query: 136 RIWDVRTGKCLKTLPAHSDPVSAVHF-NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD 194
++W + C KTL H++ V V F NR+ ++S DGL ++WD G+ +K+L D+
Sbjct: 545 KVWSLLDFSCKKTLEGHTNSVQRVKFFNREHPQLLSCGADGLIKLWDYKQGEIIKSL-DN 603
Query: 195 DNPPVSFVKFSPNGKYILAATLDNTLKLW 223
+ + + +G+Y A D L W
Sbjct: 604 HDQRIWAMDLKNDGEYFTTADADGKLSFW 632
Score = 241 (89.9 bits), Expect = 3.0e-19, P = 3.0e-19
Identities = 58/212 (27%), Positives = 102/212 (48%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS-GHKLGISDVAWSS 79
+ + G + ++++ +P+G +LA S +L++I+ G K + IS V S
Sbjct: 54 YKIPGDGEVITNLTITPDGSYLAMISQSQLLRIFDLNKGSVIKNFKLPSPVYISSV--DS 111
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNF----NPQSNLIVSGSFDESV 135
S L G D + +W++ +G +LKGH + F N Q + SG +V
Sbjct: 112 TSSLFAFGGSDGVITVWDIENGYVTHSLKGHGTTICSLTFHGELNSQDWRLASGDTMGTV 171
Query: 136 RIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL-IDD 194
+IWD+ +C+ TL H+ V V F++DG L +S D + I++T + + + T I++
Sbjct: 172 KIWDLVKRRCIHTLKDHNTAVRGVGFDQDGDLFISGGRDNVVIIYNTKNFKTINTFPINE 231
Query: 195 DNPPVSFVKFSPNGKYILAATLDNTLKLWDSK 226
FV + +Y +N LK+WD K
Sbjct: 232 QIEAAGFVSLIDDRQYFYTGGSENVLKIWDIK 263
Score = 225 (84.3 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 59/217 (27%), Positives = 107/217 (49%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK---FEK--TISGHKLGISDVAWS- 78
GHT +++V S +G+W+A++S D ++W ++G+ FE GH I+ ++ S
Sbjct: 379 GHTDILNAVDVSTDGKWIATASKDNEARLW-RWNGELQDFEPFARFQGHAGAITAISLSK 437
Query: 79 --SDSRLLVSGSDDKTLKIWELSS--GKCLKTL----KGHSNYVFCCNFNPQSNLIVSGS 130
++ + LV+GS D T+K W++ + +KT + H + + +P + S
Sbjct: 438 SQNEPKFLVTGSTDLTIKKWKIPNTPNSIVKTSEYTRRAHDKDINSIDVSPNDEYFATAS 497
Query: 131 FDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 190
+D+ ++W +G+ + L H + ++F + LIV+ S D ++W C KT
Sbjct: 498 YDKLGKVWQTDSGETIGVLKGHKRGLWDINFYKFDKLIVTGSGDKTIKVWSLLDFSCKKT 557
Query: 191 LIDDDNPPVSFVKF-SPNGKYILAATLDNTLKLWDSK 226
L N V VKF + +L+ D +KLWD K
Sbjct: 558 LEGHTNS-VQRVKFFNREHPQLLSCGADGLIKLWDYK 593
Score = 174 (66.3 bits), Expect = 4.5e-12, P = 4.5e-12
Identities = 56/213 (26%), Positives = 97/213 (45%)
Query: 30 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW-----SSDSRLL 84
+SSV A +D +I +W +G ++ GH I + + S D RL
Sbjct: 106 ISSV--DSTSSLFAFGGSDGVITVWDIENGYVTHSLKGHGTTICSLTFHGELNSQDWRL- 162
Query: 85 VSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK 144
SG T+KIW+L +C+ TLK H+ V F+ +L +SG D V I++ + K
Sbjct: 163 ASGDTMGTVKIWDLVKRRCIHTLKDHNTAVRGVGFDQDGDLFISGGRDNVVIIYNTKNFK 222
Query: 145 CLKTLPAHSDPVSA--VHFNRDGSLIVSSSYDGLCRIWDTASGQCL-KTLI----DDDNP 197
+ T P + +A V D + + + +IWD SG+ + ++ I +++
Sbjct: 223 TINTFPINEQIEAAGFVSLIDDRQYFYTGGSENVLKIWDIKSGEMIGRSPIPLKTNEELL 282
Query: 198 PVSFVKFSPNGKYILAATLDNTLKLWDSKVVTP 230
+ +K N Y++ + D TL D + +TP
Sbjct: 283 IIDVIKLYNNNLYLVIS--DQTLIELDLQELTP 313
Score = 164 (62.8 bits), Expect = 5.9e-10, P = 5.9e-10
Identities = 52/206 (25%), Positives = 92/206 (44%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLL 84
G T A S+ S NGE L ++ ++ + I + I G I+++ + D L
Sbjct: 19 GGTSA--SISTS-NGELLLATPLNEDVIITNLDTNEIIYKIPGDGEVITNLTITPDGSYL 75
Query: 85 VSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK 144
S + L+I++L+ G +K K S V+ + + S+L G D + +WD+ G
Sbjct: 76 AMISQSQLLRIFDLNKGSVIKNFKLPSP-VYISSVDSTSSLFAFGGSDGVITVWDIENGY 134
Query: 145 CLKTLPAHSDPVSAVHF----NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 200
+L H + ++ F N + S G +IWD +C+ TL D N V
Sbjct: 135 VTHSLKGHGTTICSLTFHGELNSQDWRLASGDTMGTVKIWDLVKRRCIHTL-KDHNTAVR 193
Query: 201 FVKFSPNGKYILAATLDNTLKLWDSK 226
V F +G ++ DN + ++++K
Sbjct: 194 GVGFDQDGDLFISGGRDNVVIIYNTK 219
>UNIPROTKB|Q5AGB1 [details] [associations]
symbol:CaO19.11744 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0032040 "small-subunit
processome" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0000293
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364 GO:GO:0032040
EMBL:AACQ01000021 EMBL:AACQ01000022 KO:K14555 RefSeq:XP_720576.1
RefSeq:XP_720704.1 ProteinModelPortal:Q5AGB1 STRING:Q5AGB1
GeneID:3637636 GeneID:3637718 KEGG:cal:CaO19.11744
KEGG:cal:CaO19.4268 Uniprot:Q5AGB1
Length = 799
Score = 304 (112.1 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 66/214 (30%), Positives = 116/214 (54%)
Query: 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 79
++T H K ++S+ SPN E+ A++S DKL K+W G+ + GHK G+ D+ +
Sbjct: 471 EYTRRAHDKDINSIDVSPNDEYFATASYDKLGKVWQTDSGETIGVLKGHKRGLWDINFYK 530
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNF-NPQSNLIVSGSFDESVRIW 138
+L+V+GS DKT+K+W L C KTL+GH+N V F N + ++S D +++W
Sbjct: 531 FDKLIVTGSGDKTIKVWSLLDFSCKKTLEGHTNSVQRVKFFNREHPQLLSCGADGLIKLW 590
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW--DTASGQCLKTL----- 191
D + G+ +K+L H + A+ DG ++ DG W +T K L
Sbjct: 591 DYKQGEIIKSLDNHDQRIWAMDLKNDGEYFTTADADGKLSFWTDNTEEEVKFKELQAKEK 650
Query: 192 IDDDNPPVSFVKFSP-NGKYILAATLDNTLKLWD 224
I+ + +++K + ++LA TLD++++L++
Sbjct: 651 IEQEQSLSNYIKNKDWSNAFLLALTLDHSMRLYN 684
Score = 258 (95.9 bits), Expect = 4.5e-21, P = 4.5e-21
Identities = 61/209 (29%), Positives = 103/209 (49%)
Query: 25 GHTKAVSSVKFSPNG---EWLASSSADKLIKIW------GAYDGKFEKTISGHKLGISDV 75
GH A++++ S + ++L + S D IK W + E T H I+ +
Sbjct: 425 GHAGAITAISLSKSQNEPKFLVTGSTDLTIKKWKIPNTPNSIVKTSEYTRRAHDKDINSI 484
Query: 76 AWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 135
S + + S DK K+W+ SG+ + LKGH ++ NF LIV+GS D+++
Sbjct: 485 DVSPNDEYFATASYDKLGKVWQTDSGETIGVLKGHKRGLWDINFYKFDKLIVTGSGDKTI 544
Query: 136 RIWDVRTGKCLKTLPAHSDPVSAVHF-NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD 194
++W + C KTL H++ V V F NR+ ++S DGL ++WD G+ +K+L D+
Sbjct: 545 KVWSLLDFSCKKTLEGHTNSVQRVKFFNREHPQLLSCGADGLIKLWDYKQGEIIKSL-DN 603
Query: 195 DNPPVSFVKFSPNGKYILAATLDNTLKLW 223
+ + + +G+Y A D L W
Sbjct: 604 HDQRIWAMDLKNDGEYFTTADADGKLSFW 632
Score = 241 (89.9 bits), Expect = 3.0e-19, P = 3.0e-19
Identities = 58/212 (27%), Positives = 102/212 (48%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS-GHKLGISDVAWSS 79
+ + G + ++++ +P+G +LA S +L++I+ G K + IS V S
Sbjct: 54 YKIPGDGEVITNLTITPDGSYLAMISQSQLLRIFDLNKGSVIKNFKLPSPVYISSV--DS 111
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNF----NPQSNLIVSGSFDESV 135
S L G D + +W++ +G +LKGH + F N Q + SG +V
Sbjct: 112 TSSLFAFGGSDGVITVWDIENGYVTHSLKGHGTTICSLTFHGELNSQDWRLASGDTMGTV 171
Query: 136 RIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL-IDD 194
+IWD+ +C+ TL H+ V V F++DG L +S D + I++T + + + T I++
Sbjct: 172 KIWDLVKRRCIHTLKDHNTAVRGVGFDQDGDLFISGGRDNVVIIYNTKNFKTINTFPINE 231
Query: 195 DNPPVSFVKFSPNGKYILAATLDNTLKLWDSK 226
FV + +Y +N LK+WD K
Sbjct: 232 QIEAAGFVSLIDDRQYFYTGGSENVLKIWDIK 263
Score = 225 (84.3 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 59/217 (27%), Positives = 107/217 (49%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK---FEK--TISGHKLGISDVAWS- 78
GHT +++V S +G+W+A++S D ++W ++G+ FE GH I+ ++ S
Sbjct: 379 GHTDILNAVDVSTDGKWIATASKDNEARLW-RWNGELQDFEPFARFQGHAGAITAISLSK 437
Query: 79 --SDSRLLVSGSDDKTLKIWELSS--GKCLKTL----KGHSNYVFCCNFNPQSNLIVSGS 130
++ + LV+GS D T+K W++ + +KT + H + + +P + S
Sbjct: 438 SQNEPKFLVTGSTDLTIKKWKIPNTPNSIVKTSEYTRRAHDKDINSIDVSPNDEYFATAS 497
Query: 131 FDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 190
+D+ ++W +G+ + L H + ++F + LIV+ S D ++W C KT
Sbjct: 498 YDKLGKVWQTDSGETIGVLKGHKRGLWDINFYKFDKLIVTGSGDKTIKVWSLLDFSCKKT 557
Query: 191 LIDDDNPPVSFVKF-SPNGKYILAATLDNTLKLWDSK 226
L N V VKF + +L+ D +KLWD K
Sbjct: 558 LEGHTNS-VQRVKFFNREHPQLLSCGADGLIKLWDYK 593
Score = 174 (66.3 bits), Expect = 4.5e-12, P = 4.5e-12
Identities = 56/213 (26%), Positives = 97/213 (45%)
Query: 30 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW-----SSDSRLL 84
+SSV A +D +I +W +G ++ GH I + + S D RL
Sbjct: 106 ISSV--DSTSSLFAFGGSDGVITVWDIENGYVTHSLKGHGTTICSLTFHGELNSQDWRL- 162
Query: 85 VSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK 144
SG T+KIW+L +C+ TLK H+ V F+ +L +SG D V I++ + K
Sbjct: 163 ASGDTMGTVKIWDLVKRRCIHTLKDHNTAVRGVGFDQDGDLFISGGRDNVVIIYNTKNFK 222
Query: 145 CLKTLPAHSDPVSA--VHFNRDGSLIVSSSYDGLCRIWDTASGQCL-KTLI----DDDNP 197
+ T P + +A V D + + + +IWD SG+ + ++ I +++
Sbjct: 223 TINTFPINEQIEAAGFVSLIDDRQYFYTGGSENVLKIWDIKSGEMIGRSPIPLKTNEELL 282
Query: 198 PVSFVKFSPNGKYILAATLDNTLKLWDSKVVTP 230
+ +K N Y++ + D TL D + +TP
Sbjct: 283 IIDVIKLYNNNLYLVIS--DQTLIELDLQELTP 313
Score = 164 (62.8 bits), Expect = 5.9e-10, P = 5.9e-10
Identities = 52/206 (25%), Positives = 92/206 (44%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLL 84
G T A S+ S NGE L ++ ++ + I + I G I+++ + D L
Sbjct: 19 GGTSA--SISTS-NGELLLATPLNEDVIITNLDTNEIIYKIPGDGEVITNLTITPDGSYL 75
Query: 85 VSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK 144
S + L+I++L+ G +K K S V+ + + S+L G D + +WD+ G
Sbjct: 76 AMISQSQLLRIFDLNKGSVIKNFKLPSP-VYISSVDSTSSLFAFGGSDGVITVWDIENGY 134
Query: 145 CLKTLPAHSDPVSAVHF----NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 200
+L H + ++ F N + S G +IWD +C+ TL D N V
Sbjct: 135 VTHSLKGHGTTICSLTFHGELNSQDWRLASGDTMGTVKIWDLVKRRCIHTL-KDHNTAVR 193
Query: 201 FVKFSPNGKYILAATLDNTLKLWDSK 226
V F +G ++ DN + ++++K
Sbjct: 194 GVGFDQDGDLFISGGRDNVVIIYNTK 219
>UNIPROTKB|E1BWK2 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031648 "protein destabilization"
evidence=IEA] [GO:0042347 "negative regulation of NF-kappaB import
into nucleus" evidence=IEA] [GO:0042753 "positive regulation of
circadian rhythm" evidence=IEA] [GO:0045862 "positive regulation of
proteolysis" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 GeneTree:ENSGT00690000101849 OMA:FDQWSEA
EMBL:AADN02035964 EMBL:AADN02035965 EMBL:AADN02035966
IPI:IPI00818493 Ensembl:ENSGALT00000041199 ArrayExpress:E1BWK2
Uniprot:E1BWK2
Length = 523
Score = 299 (110.3 bits), Expect = 5.4e-26, P = 5.4e-26
Identities = 71/222 (31%), Positives = 120/222 (54%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW---GAYDGKFEKTISGHKLGISDVAWS 78
TL H +AV ++FS NG + + S D+ I +W D + + GH+ ++ V +
Sbjct: 296 TLIHHNEAVLHLRFS-NG-LMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF- 352
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
D + +VS S D+T+K+W S+ + ++TL GH + C + + L+VSGS D ++R+W
Sbjct: 353 -DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLW 409
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT---------ASGQCLK 189
D+ G CL+ L H + V + F D IVS +YDG ++WD AS CL+
Sbjct: 410 DIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLR 467
Query: 190 TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPA 231
TL++ V ++F I++++ D+T+ +WD V P+
Sbjct: 468 TLVEHSGR-VFRLQFDEF--QIISSSHDDTILIWDFLNVPPS 506
Score = 289 (106.8 bits), Expect = 6.9e-25, P = 6.9e-25
Identities = 63/172 (36%), Positives = 100/172 (58%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L+ L GH AV+ V F + +++ S+S D+ IK+W +F +T++GHK GI+ + +
Sbjct: 336 LRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR 393
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
RL+VSGS D T+++W++ G CL+ L+GH V C F+ + IVSG++D +++W
Sbjct: 394 D--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVW 449
Query: 139 DVRTGK---------CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181
D++ CL+TL HS V + F D I+SSS+D IWD
Sbjct: 450 DLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIWD 499
Score = 238 (88.8 bits), Expect = 2.7e-19, P = 2.7e-19
Identities = 54/149 (36%), Positives = 87/149 (58%)
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV-RIW 138
D ++SG D ++KIW+ +S +CLK L GH+ V C ++ + +IV+GS D +V R+W
Sbjct: 229 DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDER--VIVTGSSDSTVSRVW 286
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ--CLKTLIDDDN 196
DV TG+ L TL H++ V +H L+V+ S D +WD AS L+ ++
Sbjct: 287 DVNTGEVLNTLIHHNEAV--LHLRFSNGLMVTCSKDRSIAVWDMASPTDITLRRVLVGHR 344
Query: 197 PPVSFVKFSPNGKYILAATLDNTLKLWDS 225
V+ V F + KYI++A+ D T+K+W +
Sbjct: 345 AAVNVVDF--DDKYIVSASGDRTIKVWST 371
Score = 219 (82.2 bits), Expect = 3.1e-17, P = 3.1e-17
Identities = 58/219 (26%), Positives = 112/219 (51%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLI-KIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
L GHT +V +++ + + S+D + ++W G+ T+ H + + +S+
Sbjct: 256 LTGHTGSVLCLQYDERV--IVTGSSDSTVSRVWDVNTGEVLNTLIHHNEAVLHLRFSNG- 312
Query: 82 RLLVSGSDDKTLKIWELSSGKCL---KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
L+V+ S D+++ +W+++S + + L GH V +F+ + IVS S D ++++W
Sbjct: 313 -LMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIKVW 369
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 198
T + ++TL H ++ + + RD L+VS S D R+WD G CL+ L +
Sbjct: 370 STSTCEFVRTLNGHKRGIACLQY-RD-RLVVSGSSDNTIRLWDIECGACLRVL-EGHEEL 426
Query: 199 VSFVKFSPNGKYILAATLDNTLKLWDSKV-VTPAIICST 236
V ++F + K I++ D +K+WD + + P ST
Sbjct: 427 VRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPAST 463
Score = 215 (80.7 bits), Expect = 8.4e-17, P = 8.4e-17
Identities = 57/203 (28%), Positives = 112/203 (55%)
Query: 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV 85
++K V +++ + E + S D IKIW + K ++GH G S + D R++V
Sbjct: 219 NSKGVYCLQY--DDEKIISGLRDNSIKIWDKTSLECLKVLTGHT-G-SVLCLQYDERVIV 274
Query: 86 SGSDDKTL-KIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK 144
+GS D T+ ++W++++G+ L TL H+ V F+ + L+V+ S D S+ +WD+ +
Sbjct: 275 TGSSDSTVSRVWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKDRSIAVWDMASPT 332
Query: 145 CL---KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 201
+ + L H V+ V F D IVS+S D ++W T++ + ++TL + ++
Sbjct: 333 DITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTL-NGHKRGIAC 389
Query: 202 VKFSPNGKYILAATLDNTLKLWD 224
+++ + +++ + DNT++LWD
Sbjct: 390 LQY--RDRLVVSGSSDNTIRLWD 410
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 302 (111.4 bits), Expect = 5.4e-26, P = 5.4e-26
Identities = 60/197 (30%), Positives = 100/197 (50%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
+L GHT V SV+ + E + + S I++W K +T+ GHK I + +
Sbjct: 58 SLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYG 117
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
+ SGS D +K+W++ C+ +GHS V C F+P + S + D +V++WD+
Sbjct: 118 EFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLT 177
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 201
GK + P H+ PV+ V F+ + L+ S S D R WD Q + + I+ + PV
Sbjct: 178 AGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVV-SCIEGEPGPVRS 236
Query: 202 VKFSPNGKYILAATLDN 218
V F+P+G + + D+
Sbjct: 237 VLFNPDGCCLYSGCQDS 253
Score = 297 (109.6 bits), Expect = 1.9e-25, P = 1.9e-25
Identities = 58/204 (28%), Positives = 107/204 (52%)
Query: 23 LAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
+ H VSS+ +G LA+ D + +W +++GH + V ++
Sbjct: 16 IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPE 75
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
L+V+GS ++++W+L + K L+TL GH + +F+P + SGS D ++++WD+R
Sbjct: 76 ELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR 135
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 201
C+ HS V + F+ DG + S++ D ++WD +G+ + PV+
Sbjct: 136 RKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEF-PGHTGPVNV 194
Query: 202 VKFSPNGKYILAA-TLDNTLKLWD 224
V+F PN +Y+LA+ + D T++ WD
Sbjct: 195 VEFHPN-EYLLASGSSDRTIRFWD 217
Score = 265 (98.3 bits), Expect = 5.4e-22, P = 5.4e-22
Identities = 55/171 (32%), Positives = 87/171 (50%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GH + S+ F P GE++AS S D IK+W GH + + +S D
Sbjct: 100 TLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDG 159
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
+ L S +DD T+K+W+L++GK + GH+ V F+P L+ SGS D ++R WD+
Sbjct: 160 KWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLE 219
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLI 192
+ + + PV +V FN DG + S D L R++ +C ++
Sbjct: 220 KFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSL-RVYGWEPERCFDVVL 269
Score = 204 (76.9 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 53/184 (28%), Positives = 90/184 (48%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 80
F GH++AV ++FSP+G+WLAS++ D +K+W GK GH ++ V + +
Sbjct: 141 FRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPN 200
Query: 81 SRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 140
LL SGS D+T++ W+L + + ++G V FNP + SG D S+R++
Sbjct: 201 EYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQD-SLRVYGW 259
Query: 141 RTGKCLKTLPAHSDPVSAVHFNRDGSLIVS------SSYD-GLCRIWDTASGQCLKTLID 193
+C + + V+ + D + V+ SSY L R+ T +G + +
Sbjct: 260 EPERCFDVVLVNWGKVADLAICNDQLIGVAFSQSNVSSYVVDLTRV--TRTGTVARDPVQ 317
Query: 194 DDNP 197
D P
Sbjct: 318 DHRP 321
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 302 (111.4 bits), Expect = 5.4e-26, P = 5.4e-26
Identities = 60/197 (30%), Positives = 100/197 (50%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
+L GHT V SV+ + E + + S I++W K +T+ GHK I + +
Sbjct: 58 SLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYG 117
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
+ SGS D +K+W++ C+ +GHS V C F+P + S + D +V++WD+
Sbjct: 118 EFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLT 177
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 201
GK + P H+ PV+ V F+ + L+ S S D R WD Q + + I+ + PV
Sbjct: 178 AGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVV-SCIEGEPGPVRS 236
Query: 202 VKFSPNGKYILAATLDN 218
V F+P+G + + D+
Sbjct: 237 VLFNPDGCCLYSGCQDS 253
Score = 297 (109.6 bits), Expect = 1.9e-25, P = 1.9e-25
Identities = 58/204 (28%), Positives = 107/204 (52%)
Query: 23 LAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
+ H VSS+ +G LA+ D + +W +++GH + V ++
Sbjct: 16 IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPE 75
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
L+V+GS ++++W+L + K L+TL GH + +F+P + SGS D ++++WD+R
Sbjct: 76 ELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR 135
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 201
C+ HS V + F+ DG + S++ D ++WD +G+ + PV+
Sbjct: 136 RKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEF-PGHTGPVNV 194
Query: 202 VKFSPNGKYILAA-TLDNTLKLWD 224
V+F PN +Y+LA+ + D T++ WD
Sbjct: 195 VEFHPN-EYLLASGSSDRTIRFWD 217
Score = 265 (98.3 bits), Expect = 5.4e-22, P = 5.4e-22
Identities = 55/171 (32%), Positives = 87/171 (50%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GH + S+ F P GE++AS S D IK+W GH + + +S D
Sbjct: 100 TLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDG 159
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
+ L S +DD T+K+W+L++GK + GH+ V F+P L+ SGS D ++R WD+
Sbjct: 160 KWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLE 219
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLI 192
+ + + PV +V FN DG + S D L R++ +C ++
Sbjct: 220 KFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSL-RVYGWEPERCFDVVL 269
Score = 203 (76.5 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 41/125 (32%), Positives = 68/125 (54%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 80
F GH++AV ++FSP+G+WLAS++ D +K+W GK GH ++ V + +
Sbjct: 141 FRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPN 200
Query: 81 SRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 140
LL SGS D+T++ W+L + + ++G V FNP + SG D S+R++
Sbjct: 201 EYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQD-SLRVYGW 259
Query: 141 RTGKC 145
+C
Sbjct: 260 EPERC 264
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 302 (111.4 bits), Expect = 5.5e-26, P = 5.5e-26
Identities = 60/197 (30%), Positives = 100/197 (50%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
+L GHT V SV+ + E + + S I++W K +T+ GHK I + +
Sbjct: 58 SLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYG 117
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
+ SGS D +K+W++ C+ +GHS V C F+P + S + D +V++WD+
Sbjct: 118 EFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLT 177
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 201
GK + P H+ PV+ V F+ + L+ S S D R WD Q + + I+ + PV
Sbjct: 178 AGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVV-SCIEGEPGPVRS 236
Query: 202 VKFSPNGKYILAATLDN 218
V F+P+G + + D+
Sbjct: 237 VLFNPDGCCLYSGCQDS 253
Score = 297 (109.6 bits), Expect = 1.9e-25, P = 1.9e-25
Identities = 58/204 (28%), Positives = 107/204 (52%)
Query: 23 LAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
+ H VSS+ +G LA+ D + +W +++GH + V ++
Sbjct: 16 IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPE 75
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
L+V+GS ++++W+L + K L+TL GH + +F+P + SGS D ++++WD+R
Sbjct: 76 ELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR 135
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 201
C+ HS V + F+ DG + S++ D ++WD +G+ + PV+
Sbjct: 136 RKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEF-PGHTGPVNV 194
Query: 202 VKFSPNGKYILAA-TLDNTLKLWD 224
V+F PN +Y+LA+ + D T++ WD
Sbjct: 195 VEFHPN-EYLLASGSSDRTIRFWD 217
Score = 265 (98.3 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 55/171 (32%), Positives = 87/171 (50%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GH + S+ F P GE++AS S D IK+W GH + + +S D
Sbjct: 100 TLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDG 159
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
+ L S +DD T+K+W+L++GK + GH+ V F+P L+ SGS D ++R WD+
Sbjct: 160 KWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLE 219
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLI 192
+ + + PV +V FN DG + S D L R++ +C ++
Sbjct: 220 KFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSL-RVYGWEPERCFDVVL 269
Score = 203 (76.5 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 41/125 (32%), Positives = 68/125 (54%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 80
F GH++AV ++FSP+G+WLAS++ D +K+W GK GH ++ V + +
Sbjct: 141 FRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPN 200
Query: 81 SRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 140
LL SGS D+T++ W+L + + ++G V FNP + SG D S+R++
Sbjct: 201 EYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQD-SLRVYGW 259
Query: 141 RTGKC 145
+C
Sbjct: 260 EPERC 264
>UNIPROTKB|Q8N0X2 [details] [associations]
symbol:SPAG16 "Sperm-associated antigen 16 protein"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0035085 "cilium axoneme" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086 EMBL:AF310672
EMBL:AF426740 EMBL:AF490390 EMBL:AK026377 EMBL:AK095036
EMBL:CR457359 EMBL:CR749477 EMBL:AL832962 EMBL:BC009614
EMBL:BC067756 EMBL:BC100282 IPI:IPI00166103 IPI:IPI00396021
IPI:IPI00470876 IPI:IPI00556122 IPI:IPI00556405
RefSeq:NP_001020607.1 RefSeq:NP_078808.3 UniGene:Hs.602792
ProteinModelPortal:Q8N0X2 SMR:Q8N0X2 IntAct:Q8N0X2 STRING:Q8N0X2
PhosphoSite:Q8N0X2 DMDM:146329993 PRIDE:Q8N0X2
Ensembl:ENST00000272898 Ensembl:ENST00000331683
Ensembl:ENST00000413312 Ensembl:ENST00000432529 GeneID:79582
KEGG:hsa:79582 UCSC:uc002veo.3 UCSC:uc002veq.3 UCSC:uc002ves.1
UCSC:uc010fuz.2 CTD:79582 GeneCards:GC02P214149 H-InvDB:HIX0021055
HGNC:HGNC:23225 HPA:HPA037542 MIM:612173 neXtProt:NX_Q8N0X2
PharmGKB:PA134887898 HOVERGEN:HBG086482 InParanoid:Q8N0X2
OMA:EGHNHAV OrthoDB:EOG41ZF9F PhylomeDB:Q8N0X2 GenomeRNAi:79582
NextBio:68570 ArrayExpress:Q8N0X2 Bgee:Q8N0X2 CleanEx:HS_SPAG16
Genevestigator:Q8N0X2 GermOnline:ENSG00000144451 Uniprot:Q8N0X2
Length = 631
Score = 301 (111.0 bits), Expect = 6.2e-26, P = 6.2e-26
Identities = 68/203 (33%), Positives = 106/203 (52%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLL 84
GHT +S F P+G+ LA+SS D +K+W G T GH + W S +
Sbjct: 392 GHTDWLSDCCFHPSGDKLATSSGDTTVKLWDLCKGDCILTFEGHSRAVWSCTWHSCGNFV 451
Query: 85 VSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK 144
S S DKT KIW+++S +C TL GH++ V F P SN +++ S D+++ IWD RTG
Sbjct: 452 ASSSLDKTSKIWDVNSERCRCTLYGHTDSVNSIEFFPFSNTLLTSSADKTLSIWDARTGI 511
Query: 145 CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP-PVSFVK 203
C ++L H ++ F+ G +I S G+ ++WD + L + D P P + V
Sbjct: 512 CEQSLYGHMHSINDAIFDPRGHMIASCDACGVTKLWDFR--KLLPIVSIDIGPSPGNEVN 569
Query: 204 FSPNGKYILAATLDNTLKLWDSK 226
F +G+ + A+ + + L D K
Sbjct: 570 FDSSGRVLAQASGNGVIHLLDLK 592
Score = 299 (110.3 bits), Expect = 1.0e-25, P = 1.0e-25
Identities = 67/216 (31%), Positives = 106/216 (49%)
Query: 17 YVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA 76
Y LK H VS V P+ + L S D+L K+ G T GH +SD
Sbjct: 342 YKLKNIFRLHELPVSCVSMQPHKDILVSCGEDRLWKVLGLPKCNVLLTGFGHTDWLSDCC 401
Query: 77 WSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 136
+ L + S D T+K+W+L G C+ T +GHS V+ C ++ N + S S D++ +
Sbjct: 402 FHPSGDKLATSSGDTTVKLWDLCKGDCILTFEGHSRAVWSCTWHSCGNFVASSSLDKTSK 461
Query: 137 IWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 196
IWDV + +C TL H+D V+++ F + +++SS D IWD +G C ++L +
Sbjct: 462 IWDVNSERCRCTLYGHTDSVNSIEFFPFSNTLLTSSADKTLSIWDARTGICEQSLYGHMH 521
Query: 197 PPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAI 232
++ F P G I + KLWD + + P +
Sbjct: 522 S-INDAIFDPRGHMIASCDACGVTKLWDFRKLLPIV 556
Score = 254 (94.5 bits), Expect = 7.7e-21, P = 7.7e-21
Identities = 59/202 (29%), Positives = 106/202 (52%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
T GH++AV S + G ++ASSS DK KIW + T+ GH ++ + + S
Sbjct: 431 TFEGHSRAVWSCTWHSCGNFVASSSLDKTSKIWDVNSERCRCTLYGHTDSVNSIEFFPFS 490
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
L++ S DKTL IW+ +G C ++L GH + + F+P+ ++I S ++WD R
Sbjct: 491 NTLLTSSADKTLSIWDARTGICEQSLYGHMHSINDAIFDPRGHMIASCDACGVTKLWDFR 550
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 201
+ ++ P + V+F+ G ++ +S +G+ + D SG+ K L+ +N +
Sbjct: 551 KLLPIVSIDIGPSPGNEVNFDSSGRVLAQASGNGVIHLLDLKSGEIHK-LMGHENEAHTV 609
Query: 202 VKFSPNGKYILAATLDNTLKLW 223
V FS +G+ + + D T++ W
Sbjct: 610 V-FSHDGEILFSGGSDGTVRTW 630
Score = 237 (88.5 bits), Expect = 5.3e-19, P = 5.3e-19
Identities = 59/208 (28%), Positives = 103/208 (49%)
Query: 20 KFTLAGHTK-AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
K + G+TK + + PN S + K +D K + H+L +S V+
Sbjct: 306 KTKMKGNTKDSEFPIDMQPNPNLNVSKESLSPAK----FDYKLKNIFRLHELPVSCVSMQ 361
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
+LVS +D+ K+ L L T GH++++ C F+P + + + S D +V++W
Sbjct: 362 PHKDILVSCGEDRLWKVLGLPKCNVLLTGFGHTDWLSDCCFHPSGDKLATSSGDTTVKLW 421
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 198
D+ G C+ T HS V + ++ G+ + SSS D +IWD S +C TL +
Sbjct: 422 DLCKGDCILTFEGHSRAVWSCTWHSCGNFVASSSLDKTSKIWDVNSERCRCTLYGHTDS- 480
Query: 199 VSFVKFSPNGKYILAATLDNTLKLWDSK 226
V+ ++F P +L ++ D TL +WD++
Sbjct: 481 VNSIEFFPFSNTLLTSSADKTLSIWDAR 508
>UNIPROTKB|Q6GMD2 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GO:GO:0055087 CTD:80349 HOVERGEN:HBG059813 KO:K12602
EMBL:BC074136 RefSeq:NP_001086055.1 UniGene:Xl.23922
ProteinModelPortal:Q6GMD2 GeneID:444484 KEGG:xla:444484
Xenbase:XB-GENE-5751613 Uniprot:Q6GMD2
Length = 305
Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 64/206 (31%), Positives = 113/206 (54%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
+++ L GH V SV SP+G +ASSS D I++W GK ++I + VA+S
Sbjct: 56 MQWALEGHQLGVVSVDVSPSGNIMASSSLDAHIRLWDLESGKQIRSIDAGPVDAWSVAFS 115
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
DS+ L +GS + I+ + +GK +L ++ ++P + SG+ D + I+
Sbjct: 116 PDSQHLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIF 175
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 198
D+ TGK L TL H+ P+ ++ F+ D L+V++S DG +I+D TL +
Sbjct: 176 DIATGKLLHTLEGHAMPIRSLTFSTDSQLLVTASDDGYIKIYDVQHASLAATLSGHGSWV 235
Query: 199 VSFVKFSPNGKYILAATLDNTLKLWD 224
++ V FSP+ + ++++ D ++K+WD
Sbjct: 236 LN-VAFSPDDAHFVSSSSDKSVKVWD 260
Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 60/162 (37%), Positives = 94/162 (58%)
Query: 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 79
+++L K + S+ +SP+G++LAS + D +I I+ GK T+ GH + I + +S+
Sbjct: 141 EYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFST 200
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
DS+LLV+ SDD +KI+++ TL GH ++V F+P VS S D+SV++WD
Sbjct: 201 DSQLLVTASDDGYIKIYDVQHASLAATLSGHGSWVLNVAFSPDDAHFVSSSSDKSVKVWD 260
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181
V C+ T H D V V +NR+GS IVS D ++D
Sbjct: 261 VSARTCVHTFLDHQDQVWGVKYNRNGSKIVSVGDDQEIHVYD 302
Score = 271 (100.5 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 63/196 (32%), Positives = 107/196 (54%)
Query: 32 SVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDK 91
SV FSP+ + LA+ S + I+G GK E ++ I +A+S D + L SG+ D
Sbjct: 111 SVAFSPDSQHLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDG 170
Query: 92 TLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPA 151
+ I+++++GK L TL+GH+ + F+ S L+V+ S D ++I+DV+ TL
Sbjct: 171 IINIFDIATGKLLHTLEGHAMPIRSLTFSTDSQLLVTASDDGYIKIYDVQHASLAATLSG 230
Query: 152 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 211
H V V F+ D + VSSS D ++WD ++ C+ T +D + V VK++ NG I
Sbjct: 231 HGSWVLNVAFSPDDAHFVSSSSDKSVKVWDVSARTCVHTFLDHQDQ-VWGVKYNRNGSKI 289
Query: 212 LAATLDNTLKLWDSKV 227
++ D + ++D +
Sbjct: 290 VSVGDDQEIHVYDCPI 305
Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 59/205 (28%), Positives = 106/205 (51%)
Query: 26 HTKAVSSVKFSPNG----EWLASSSADKLIKIWGAYDGKFEK--TISGHKLGISDVAWSS 79
H A+ SV + N E + S S D L+K+W D + E + GH+LG+ V S
Sbjct: 15 HEDAIWSVGWGKNSNDGSELVISGSLDDLVKVWKWSDERLEMQWALEGHQLGVVSVDVSP 74
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
++ S S D +++W+L SGK ++++ + F+P S + +GS V I+
Sbjct: 75 SGNIMASSSLDAHIRLWDLESGKQIRSIDAGPVDAWSVAFSPDSQHLATGSHVGKVNIFG 134
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
V TGK +L + ++ ++ DG + S + DG+ I+D A+G+ L TL + P+
Sbjct: 135 VETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTL-EGHAMPI 193
Query: 200 SFVKFSPNGKYILAATLDNTLKLWD 224
+ FS + + ++ A+ D +K++D
Sbjct: 194 RSLTFSTDSQLLVTASDDGYIKIYD 218
Score = 196 (74.1 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 40/121 (33%), Positives = 66/121 (54%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L TL GH + S+ FS + + L ++S D IKI+ T+SGH + +VA+S
Sbjct: 182 LLHTLEGHAMPIRSLTFSTDSQLLVTASDDGYIKIYDVQHASLAATLSGHGSWVLNVAFS 241
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
D VS S DK++K+W++S+ C+ T H + V+ +N + IVS D+ + ++
Sbjct: 242 PDDAHFVSSSSDKSVKVWDVSARTCVHTFLDHQDQVWGVKYNRNGSKIVSVGDDQEIHVY 301
Query: 139 D 139
D
Sbjct: 302 D 302
>DICTYBASE|DDB_G0271788 [details] [associations]
symbol:wdr57 "putative U5 small nuclear
ribonucleoprotein" species:44689 "Dictyostelium discoideum"
[GO:0005681 "spliceosomal complex" evidence=IEA;ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0271788
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR GO:GO:0005681 EMBL:AAFI02000006
GO:GO:0000398 KO:K12857 OMA:HAGSVNE HSSP:P61964 RefSeq:XP_645454.1
ProteinModelPortal:Q55AR8 STRING:Q55AR8 EnsemblProtists:DDB0233518
GeneID:8618082 KEGG:ddi:DDB_G0271788 Uniprot:Q55AR8
Length = 355
Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 67/211 (31%), Positives = 111/211 (52%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKLGISDVAWSSDS 81
L GH + S KF+ G LAS +DK I +W Y ++ GHK I ++ WS+DS
Sbjct: 58 LIGHKGEIYSCKFNSYGTALASGGSDKEIFLWNVYGECINYSVLKGHKGTILELHWSTDS 117
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYV-FCCNFNPQSNLIVSGSFDESVRIWDV 140
+ + DK++ +W+ + G+ +K ++ HS V CC L+ SGS D S RI+D
Sbjct: 118 NEIYTACTDKSIGVWDSNKGELIKRIREHSGVVNSCCPARRGPPLVASGSDDRSARIFDT 177
Query: 141 RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC-LKTLIDDDNPPV 199
R+ K L H PV++V F+ +++ D + R+WD + + L TL + +
Sbjct: 178 RS-KGSTHLFQHKYPVTSVCFSDASDQLITGGIDNVIRVWDIRNQEDPLYTLASHQDT-I 235
Query: 200 SFVKFSPNGKYILAATLDNTLKLWDSKVVTP 230
+ S +G Y+L+ ++DN+ K+WD + P
Sbjct: 236 TSTSVSKDGAYLLSNSMDNSCKIWDIRPYAP 266
Score = 159 (61.0 bits), Expect = 7.8e-10, P = 7.8e-10
Identities = 46/158 (29%), Positives = 76/158 (48%)
Query: 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK-TISGHKLGISDVAWSSDSRLL 84
H V+SV FS + L + D +I++W + + T++ H+ I+ + S D L
Sbjct: 188 HKYPVTSVCFSDASDQLITGGIDNVIRVWDIRNQEDPLYTLASHQDTITSTSVSKDGAYL 247
Query: 85 VSGSDDKTLKIWELSS----GKCLKTLKG-HSNY---VFCCNFNPQSNLIVSGSFDESVR 136
+S S D + KIW++ + +KT G +N+ + +++ I GS D V
Sbjct: 248 LSNSMDNSCKIWDIRPYAPPNRNIKTFNGAQNNFEKNLIKSSWSIDGRRIGCGSSDRQVY 307
Query: 137 IWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 174
IWD T + LP HS V+ V F+ + +I S S D
Sbjct: 308 IWDTNTKQLQYCLPGHSGTVNEVTFHPNEPIIASCSSD 345
Score = 151 (58.2 bits), Expect = 9.6e-09, P = 9.6e-09
Identities = 38/129 (29%), Positives = 65/129 (50%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWG----AYDGKFEKTISG----HKLGI 72
+TLA H ++S S +G +L S+S D KIW A + KT +G + +
Sbjct: 226 YTLASHQDTITSTSVSKDGAYLLSNSMDNSCKIWDIRPYAPPNRNIKTFNGAQNNFEKNL 285
Query: 73 SDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 132
+WS D R + GS D+ + IW+ ++ + L GHS V F+P +I S S D
Sbjct: 286 IKSSWSIDGRRIGCGSSDRQVYIWDTNTKQLQYCLPGHSGTVNEVTFHPNEPIIASCSSD 345
Query: 133 ESVRIWDVR 141
+++ + +++
Sbjct: 346 KTIYLGEIK 354
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 301 (111.0 bits), Expect = 7.1e-26, P = 7.1e-26
Identities = 59/197 (29%), Positives = 100/197 (50%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
+L GHT V SV+ + E + + S I++W K +T+ GHK I + +
Sbjct: 58 SLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYG 117
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
+ SGS D +K+W++ C+ +GHS V C F+P + S + D +V++WD+
Sbjct: 118 EFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLT 177
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 201
GK + P H+ PV+ V F+ + L+ S S D R WD Q + + I+ + PV
Sbjct: 178 AGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVV-SCIEGEPGPVRS 236
Query: 202 VKFSPNGKYILAATLDN 218
+ F+P+G + + D+
Sbjct: 237 ILFNPDGCCLYSGCQDS 253
Score = 297 (109.6 bits), Expect = 1.9e-25, P = 1.9e-25
Identities = 58/204 (28%), Positives = 107/204 (52%)
Query: 23 LAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
+ H VSS+ +G LA+ D + +W +++GH + V ++
Sbjct: 16 IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPE 75
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
L+V+GS ++++W+L + K L+TL GH + +F+P + SGS D ++++WD+R
Sbjct: 76 ELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR 135
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 201
C+ HS V + F+ DG + S++ D ++WD +G+ + PV+
Sbjct: 136 RKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEF-PGHTGPVNV 194
Query: 202 VKFSPNGKYILAA-TLDNTLKLWD 224
V+F PN +Y+LA+ + D T++ WD
Sbjct: 195 VEFHPN-EYLLASGSSDRTIRFWD 217
Score = 264 (98.0 bits), Expect = 7.1e-22, P = 7.1e-22
Identities = 54/171 (31%), Positives = 87/171 (50%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GH + S+ F P GE++AS S D IK+W GH + + +S D
Sbjct: 100 TLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDG 159
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
+ L S +DD T+K+W+L++GK + GH+ V F+P L+ SGS D ++R WD+
Sbjct: 160 KWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLE 219
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLI 192
+ + + PV ++ FN DG + S D L R++ +C ++
Sbjct: 220 KFQVVSCIEGEPGPVRSILFNPDGCCLYSGCQDSL-RVYGWEPERCFDVVL 269
Score = 216 (81.1 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 56/185 (30%), Positives = 92/185 (49%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 80
F GH++AV ++FSP+G+WLAS++ D +K+W GK GH ++ V + +
Sbjct: 141 FRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPN 200
Query: 81 SRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 140
LL SGS D+T++ W+L + + ++G V FNP + SG D S+R++
Sbjct: 201 EYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSILFNPDGCCLYSGCQD-SLRVYGW 259
Query: 141 RTGKCLKTLPAHSDPVS--AVHFNRDGSLIVS----SSYD-GLCRIWDTASGQCLKTLID 193
+C + H V+ A+ N+ + S SSY L R+ T +G + +
Sbjct: 260 EPERCFDVVLVHWGKVADLAICNNQLIGVAFSQSNVSSYVVDLTRV--TRTGTVARDPVQ 317
Query: 194 DDNPP 198
D PP
Sbjct: 318 DSRPP 322
>POMBASE|SPAC227.12 [details] [associations]
symbol:SPAC227.12 "U4/U6 x U5 tri-snRNP complex subunit
Prp4 family (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] [GO:0045292 "mRNA cis splicing, via spliceosome"
evidence=ISS] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 PomBase:SPAC227.12
GO:GO:0005829 EMBL:CU329670 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0046540 HSSP:P16649 GO:GO:0045292
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
OMA:CKIWDLR OrthoDB:EOG4V1B90 PIR:T50168 RefSeq:NP_592966.1
ProteinModelPortal:Q9UTC7 IntAct:Q9UTC7 STRING:Q9UTC7
EnsemblFungi:SPAC227.12.1 GeneID:2541477 KEGG:spo:SPAC227.12
NextBio:20802576 Uniprot:Q9UTC7
Length = 462
Score = 295 (108.9 bits), Expect = 7.5e-26, P = 7.5e-26
Identities = 63/203 (31%), Positives = 103/203 (50%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
L GH V V F P+G++L S+S D ++W + G GH GI +A D
Sbjct: 261 LEGHLARVGRVAFHPSGDYLVSASFDTTWRLWDVHTGVELLMQEGHSEGIFSIACQPDGS 320
Query: 83 LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 142
L+ SG +D +IW+L SGK + L H + ++P + + S D++V+IWD+R
Sbjct: 321 LVSSGGNDAIGRIWDLRSGKSIMVLDEHIRQIVAMAWSPNGYQLATSSADDTVKIWDLRK 380
Query: 143 GKCLKTLPAHSDPVSAVHFNRDG--SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 200
T+PAHS VS V + G I +S YDG ++W+ + +K+++ + +S
Sbjct: 381 VSLAHTIPAHSSLVSDVRYIESGVNRFIATSGYDGCVKLWNPLNCSLIKSMVGHEEKVMS 440
Query: 201 FVKFSPNGKYILAATLDNTLKLW 223
+ G +++ D T+KLW
Sbjct: 441 VDGY---GDRFISSGYDRTIKLW 460
Score = 294 (108.6 bits), Expect = 9.8e-26, P = 9.8e-26
Identities = 70/216 (32%), Positives = 113/216 (52%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV-------AW 77
G + ++ V+FS NG AS S +K+W + + + GH +S + AW
Sbjct: 170 GGERPIAIVRFSNNGNHFASGSWGGQVKVWNSDNLSEVQLFRGHTDRVSGLDWYPLCQAW 229
Query: 78 SSDSR--LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 135
+DS L +G+ D T+ +W+ S L L+GH V F+P + +VS SFD +
Sbjct: 230 DADSEQLTLATGAADNTVCLWKASQSTPLLRLEGHLARVGRVAFHPSGDYLVSASFDTTW 289
Query: 136 RIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD 195
R+WDV TG L HS+ + ++ DGSL+ S D + RIWD SG+ + L D+
Sbjct: 290 RLWDVHTGVELLMQEGHSEGIFSIACQPDGSLVSSGGNDAIGRIWDLRSGKSIMVL-DEH 348
Query: 196 NPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPA 231
+ + +SPNG + ++ D+T+K+WD + V+ A
Sbjct: 349 IRQIVAMAWSPNGYQLATSSADDTVKIWDLRKVSLA 384
Score = 236 (88.1 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 63/211 (29%), Positives = 102/211 (48%)
Query: 25 GHTKAVSSVKFSPNGE-W--------LASSSADKLIKIWGAYDGKFEKTISGHKLGISDV 75
GHT VS + + P + W LA+ +AD + +W A + GH + V
Sbjct: 212 GHTDRVSGLDWYPLCQAWDADSEQLTLATGAADNTVCLWKASQSTPLLRLEGHLARVGRV 271
Query: 76 AWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 135
A+ LVS S D T ++W++ +G L +GHS +F P +L+ SG D
Sbjct: 272 AFHPSGDYLVSASFDTTWRLWDVHTGVELLMQEGHSEGIFSIACQPDGSLVSSGGNDAIG 331
Query: 136 RIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD 195
RIWD+R+GK + L H + A+ ++ +G + +SS D +IWD T I
Sbjct: 332 RIWDLRSGKSIMVLDEHIRQIVAMAWSPNGYQLATSSADDTVKIWDLRKVSLAHT-IPAH 390
Query: 196 NPPVSFVKFSPNG--KYILAATLDNTLKLWD 224
+ VS V++ +G ++I + D +KLW+
Sbjct: 391 SSLVSDVRYIESGVNRFIATSGYDGCVKLWN 421
>TAIR|locus:2005539 [details] [associations]
symbol:PRL1 "AT4G15900" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0009870 "defense
response signaling pathway, resistance gene-dependent"
evidence=IMP] [GO:0010204 "defense response signaling pathway,
resistance gene-independent" evidence=IMP] [GO:0042742 "defense
response to bacterium" evidence=IMP] [GO:0050832 "defense response
to fungus" evidence=IMP] [GO:0006508 "proteolysis" evidence=IMP]
[GO:0009755 "hormone-mediated signaling pathway" evidence=RCA;IMP]
[GO:0010154 "fruit development" evidence=IMP] [GO:0010182 "sugar
mediated signaling pathway" evidence=RCA;IMP] [GO:0048364 "root
development" evidence=IMP] [GO:0048366 "leaf development"
evidence=RCA;IMP] [GO:0048825 "cotyledon development"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IPI] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0050826 "response to freezing" evidence=RCA] [GO:0051301 "cell
division" evidence=RCA] [GO:0009749 "response to glucose stimulus"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0005634 GO:GO:0045892
EMBL:CP002687 GenomeReviews:CT486007_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0050832
GO:GO:0009749 GO:GO:0042742 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006508 GO:GO:0045087 GO:GO:0048364
GO:GO:0010182 GO:GO:0016567 GO:GO:0009870 GO:GO:0009755
GO:GO:0048366 GO:GO:0048825 EMBL:Z97339 GO:GO:0010204 GO:GO:0080008
EMBL:AL161542 HOGENOM:HOG000207595 KO:K12862 OMA:ITAEADK
EMBL:X82824 EMBL:X82825 IPI:IPI00524936 PIR:S49820
RefSeq:NP_193325.1 UniGene:At.103 ProteinModelPortal:Q42384
SMR:Q42384 IntAct:Q42384 STRING:Q42384 PaxDb:Q42384 PRIDE:Q42384
EnsemblPlants:AT4G15900.1 GeneID:827272 KEGG:ath:AT4G15900
GeneFarm:2847 TAIR:At4g15900 InParanoid:Q42384 PhylomeDB:Q42384
ProtClustDB:CLSN2685622 Genevestigator:Q42384 GermOnline:AT4G15900
Uniprot:Q42384
Length = 486
Score = 296 (109.3 bits), Expect = 8.0e-26, P = 8.0e-26
Identities = 61/199 (30%), Positives = 99/199 (49%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
+ GH V SV F P+ EW + SAD+ IKIW G + T++GH + +A S+
Sbjct: 172 IQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHT 231
Query: 83 LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 142
+ S DDK +K W+L K +++ GH + V+C +P +++++G D R+WD+RT
Sbjct: 232 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRT 291
Query: 143 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 202
+ L H + V +V +V+ S+D + WD G+ + TL V +
Sbjct: 292 KMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKS-VRAM 350
Query: 203 KFSPNGKYILAATLDNTLK 221
P +A+ DNT K
Sbjct: 351 TLHPKENAFASASADNTKK 369
Score = 224 (83.9 bits), Expect = 7.4e-18, P = 7.4e-18
Identities = 55/211 (26%), Positives = 98/211 (46%)
Query: 18 VLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW 77
VLK TL GH + V + S ++ S+ DK +K W K ++ GH G+ +A
Sbjct: 209 VLKLTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLAL 268
Query: 78 SSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFN-PQSNLIVSGSFDESVR 136
+L++G D ++W++ + + L GH N V C F P +V+GS D +++
Sbjct: 269 HPTLDVLLTGGRDSVCRVWDIRTKMQIFALSGHDNTV-CSVFTRPTDPQVVTGSHDTTIK 327
Query: 137 IWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 196
WD+R GK + TL H V A+ + + S+S D + + G+ ++
Sbjct: 328 FWDLRYGKTMSTLTHHKKSVRAMTLHPKENAFASASADNTKK-FSLPKGEFCHNMLSQQK 386
Query: 197 PPVSFVKFSPNGKYILAATLDN-TLKLWDSK 226
++ + + +G + DN ++ WD K
Sbjct: 387 TIINAMAVNEDGVMVTGG--DNGSIWFWDWK 415
Score = 194 (73.4 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 45/171 (26%), Positives = 79/171 (46%)
Query: 54 WGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNY 113
W A K + I GH + VA+ + +GS D+T+KIW++++G TL GH
Sbjct: 162 WHA-PWKNYRVIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQ 220
Query: 114 VFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY 173
V + + + S D+ V+ WD+ K +++ H V + + ++++
Sbjct: 221 VRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGR 280
Query: 174 DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
D +CR+WD + + L DN S V P ++ + D T+K WD
Sbjct: 281 DSVCRVWDIRTKMQIFALSGHDNTVCS-VFTRPTDPQVVTGSHDTTIKFWD 330
Score = 182 (69.1 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 52/215 (24%), Positives = 91/215 (42%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLL 84
GH V + P + L + D + ++W +SGH + V +
Sbjct: 258 GHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQIFALSGHDNTVCSVFTRPTDPQV 317
Query: 85 VSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK 144
V+GS D T+K W+L GK + TL H V +P+ N S S D + + + + G+
Sbjct: 318 VTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPKENAFASASADNTKK-FSLPKGE 376
Query: 145 -CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG---QCLKTLID----DDN 196
C L ++A+ N DG ++V+ +G WD SG Q +T++ +
Sbjct: 377 FCHNMLSQQKTIINAMAVNEDG-VMVTGGDNGSIWFWDWKSGHSFQQSETIVQPGSLESE 435
Query: 197 PPVSFVKFSPNGKYILAATLDNTLKLW-DSKVVTP 230
+ + G ++ D T+K+W + + TP
Sbjct: 436 AGIYAACYDNTGSRLVTCEADKTIKMWKEDENATP 470
Score = 134 (52.2 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 45/193 (23%), Positives = 78/193 (40%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 80
F L+GH V SV P + + S D IK W GK T++ HK + +
Sbjct: 296 FALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPK 355
Query: 81 SRLLVSGSDDKTLKIWELSSGK-CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
S S D T K + L G+ C L + N + ++V+G + S+ WD
Sbjct: 356 ENAFASASADNTKK-FSLPKGEFCHNMLSQQKTIINAMAVN-EDGVMVTGGDNGSIWFWD 413
Query: 140 VRTGKCLK---TL--PAHSDPVSAVH---FNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 191
++G + T+ P + + ++ ++ GS +V+ D ++W +T
Sbjct: 414 WKSGHSFQQSETIVQPGSLESEAGIYAACYDNTGSRLVTCEADKTIKMWKEDENATPETH 473
Query: 192 IDDDNPPVSFVKF 204
+ PP +F
Sbjct: 474 PINFKPPKEIRRF 486
>UNIPROTKB|E1BHK9 [details] [associations]
symbol:E1BHK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 EMBL:DAAA02074871 IPI:IPI00726849
ProteinModelPortal:E1BHK9 Ensembl:ENSBTAT00000028149 OMA:RTATERK
Uniprot:E1BHK9
Length = 586
Score = 299 (110.3 bits), Expect = 8.2e-26, P = 8.2e-26
Identities = 67/206 (32%), Positives = 102/206 (49%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI--SGHKLGISDVAWSSD 80
L GH V S +F P+ L S S D I+ W F T+ GH + D+ S
Sbjct: 335 LLGHCGPVYSTRFLPDSSALLSCSEDTSIRYWDLES--FTNTVLYQGHAYPVWDLDISPH 392
Query: 81 SRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 140
S S S D T ++W L+ GH V C F+P SN + +GS D++VR+W
Sbjct: 393 SLFFASASYDHTARLWSFDRTYPLRIYAGHLAGVDCVKFHPNSNYLATGSTDKTVRLWSA 452
Query: 141 RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 200
+ G ++ H PV + F+ +G +VS+ D L ++WD ASG K L ++
Sbjct: 453 QQGNSVRLFTGHCGPVRCLAFSPNGQYLVSAGEDQLLKLWDLASGTLYKDL-HGHTDDIT 511
Query: 201 FVKFSPNGKYILAATLDNTLKLWDSK 226
V FS + I +A++DN++++WD K
Sbjct: 512 SVTFSLDSSVIASASMDNSVRIWDIK 537
Score = 273 (101.2 bits), Expect = 5.6e-23, P = 5.6e-23
Identities = 54/161 (33%), Positives = 88/161 (54%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKLGISDVAWSSDSRL 83
GH V + SP+ + AS+S D ++W ++D + I +GH G+ V + +S
Sbjct: 379 GHAYPVWDLDISPHSLFFASASYDHTARLW-SFDRTYPLRIYAGHLAGVDCVKFHPNSNY 437
Query: 84 LVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 143
L +GS DKT+++W G ++ GH V C F+P +VS D+ +++WD+ +G
Sbjct: 438 LATGSTDKTVRLWSAQQGNSVRLFTGHCGPVRCLAFSPNGQYLVSAGEDQLLKLWDLASG 497
Query: 144 KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 184
K L H+D +++V F+ D S+I S+S D RIWD S
Sbjct: 498 TLYKDLHGHTDDITSVTFSLDSSVIASASMDNSVRIWDIKS 538
Score = 254 (94.5 bits), Expect = 6.5e-21, P = 6.5e-21
Identities = 49/126 (38%), Positives = 76/126 (60%)
Query: 17 YVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA 76
Y L+ AGH V VKF PN +LA+ S DK +++W A G + +GH + +A
Sbjct: 414 YPLRI-YAGHLAGVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHCGPVRCLA 472
Query: 77 WSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 136
+S + + LVS +D+ LK+W+L+SG K L GH++ + F+ S++I S S D SVR
Sbjct: 473 FSPNGQYLVSAGEDQLLKLWDLASGTLYKDLHGHTDDITSVTFSLDSSVIASASMDNSVR 532
Query: 137 IWDVRT 142
IWD+++
Sbjct: 533 IWDIKS 538
Score = 213 (80.0 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 48/162 (29%), Positives = 79/162 (48%)
Query: 63 KTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQ 122
K + GH + + DS L+S S+D +++ W+L S +GH+ V+ + +P
Sbjct: 333 KVLLGHCGPVYSTRFLPDSSALLSCSEDTSIRYWDLESFTNTVLYQGHAYPVWDLDISPH 392
Query: 123 SNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 182
S S S+D + R+W L+ H V V F+ + + + + S D R+W
Sbjct: 393 SLFFASASYDHTARLWSFDRTYPLRIYAGHLAGVDCVKFHPNSNYLATGSTDKTVRLWSA 452
Query: 183 ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
G ++ L PV + FSPNG+Y+++A D LKLWD
Sbjct: 453 QQGNSVR-LFTGHCGPVRCLAFSPNGQYLVSAGEDQLLKLWD 493
Score = 177 (67.4 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 51/197 (25%), Positives = 93/197 (47%)
Query: 30 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSD 89
+++ + SP+ + LA+ + IK+W + KF+ H++ +S + +D+ L +
Sbjct: 271 LNTAEASPDNKLLATGLNNSSIKLW-SLTSKFKS--KPHQIDVSHIHLINDT--LEVDEE 325
Query: 90 DKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTL 149
D+T ++ + K L GH V+ F P S+ ++S S D S+R WD+ +
Sbjct: 326 DRT------ATER--KVLLGHCGPVYSTRFLPDSSALLSCSEDTSIRYWDLESFTNTVLY 377
Query: 150 PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK 209
H+ PV + + S+SYD R+W L+ + V VKF PN
Sbjct: 378 QGHAYPVWDLDISPHSLFFASASYDHTARLWSFDRTYPLR-IYAGHLAGVDCVKFHPNSN 436
Query: 210 YILAATLDNTLKLWDSK 226
Y+ + D T++LW ++
Sbjct: 437 YLATGSTDKTVRLWSAQ 453
Score = 162 (62.1 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 39/121 (32%), Positives = 62/121 (51%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLL 84
GH V + FSPNG++L S+ D+L+K+W G K + GH I+ V +S DS ++
Sbjct: 463 GHCGPVRCLAFSPNGQYLVSAGEDQLLKLWDLASGTLYKDLHGHTDDITSVTFSLDSSVI 522
Query: 85 VSGSDDKTLKIWEL-----------SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 133
S S D +++IW++ SS + L G + V F S L+V+G +E
Sbjct: 523 ASASMDNSVRIWDIKSKHNSTPADGSSSELLGVYTGQMSTVLNVQFMAGSRLLVTGIREE 582
Query: 134 S 134
+
Sbjct: 583 N 583
>UNIPROTKB|Q6PBD6 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:BC059759 RefSeq:NP_988871.1 UniGene:Str.5901
ProteinModelPortal:Q6PBD6 Ensembl:ENSXETT00000020997 GeneID:394466
KEGG:xtr:394466 Xenbase:XB-GENE-5751496 InParanoid:Q6PBD6
Bgee:Q6PBD6 Uniprot:Q6PBD6
Length = 305
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 60/162 (37%), Positives = 94/162 (58%)
Query: 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 79
+++L K + S+ +SP+G++LAS + D +I I+ GK T+ GH + I + +S
Sbjct: 141 EYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP 200
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
DS+LLV+ SDD +KI+E+ TL GH ++V F+P VS S D+SV++WD
Sbjct: 201 DSQLLVTASDDGYIKIYEVQHASLAATLSGHGSWVLNVAFSPDDTHFVSSSSDKSVKVWD 260
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181
V C+ T H D V V +N++GS IVS + D ++D
Sbjct: 261 VSARTCVHTFLDHQDQVWGVKYNKNGSKIVSVADDQEIHVYD 302
Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 65/206 (31%), Positives = 112/206 (54%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L+ TL GH V SV SP+G +ASSS D I++W GK + I + VA+S
Sbjct: 56 LQSTLEGHQLGVVSVDVSPSGNIMASSSLDAHIRLWDLESGKQIRAIDAGPVDAWSVAFS 115
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
DS+ L +GS + I+ + +GK +L ++ ++P + SG+ D + I+
Sbjct: 116 PDSQHLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIF 175
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 198
D+ TGK L TL H+ P+ ++ F+ D L+V++S DG +I++ TL +
Sbjct: 176 DIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYEVQHASLAATLSGHGSWV 235
Query: 199 VSFVKFSPNGKYILAATLDNTLKLWD 224
++ V FSP+ + ++++ D ++K+WD
Sbjct: 236 LN-VAFSPDDTHFVSSSSDKSVKVWD 260
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 63/196 (32%), Positives = 108/196 (55%)
Query: 32 SVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDK 91
SV FSP+ + LA+ S + I+G GK E ++ I +A+S D + L SG+ D
Sbjct: 111 SVAFSPDSQHLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDG 170
Query: 92 TLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPA 151
+ I+++++GK L TL+GH+ + F+P S L+V+ S D ++I++V+ TL
Sbjct: 171 IINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYEVQHASLAATLSG 230
Query: 152 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 211
H V V F+ D + VSSS D ++WD ++ C+ T +D + V VK++ NG I
Sbjct: 231 HGSWVLNVAFSPDDTHFVSSSSDKSVKVWDVSARTCVHTFLDHQDQ-VWGVKYNKNGSKI 289
Query: 212 LAATLDNTLKLWDSKV 227
++ D + ++D +
Sbjct: 290 VSVADDQEIHVYDCPI 305
Score = 257 (95.5 bits), Expect = 4.3e-22, P = 4.3e-22
Identities = 60/205 (29%), Positives = 107/205 (52%)
Query: 26 HTKAVSSVKFSPNG----EWLASSSADKLIKIWGAYDGKFE--KTISGHKLGISDVAWSS 79
H A+ SV + N E + S S D L+K+W D + E T+ GH+LG+ V S
Sbjct: 15 HEDAIWSVGWGKNSNDGSELVISGSLDDLVKVWKWSDERLELQSTLEGHQLGVVSVDVSP 74
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
++ S S D +++W+L SGK ++ + + F+P S + +GS V I+
Sbjct: 75 SGNIMASSSLDAHIRLWDLESGKQIRAIDAGPVDAWSVAFSPDSQHLATGSHVGKVNIFG 134
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
V TGK +L + ++ ++ DG + S + DG+ I+D A+G+ L TL + P+
Sbjct: 135 VETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTL-EGHAMPI 193
Query: 200 SFVKFSPNGKYILAATLDNTLKLWD 224
+ FSP+ + ++ A+ D +K+++
Sbjct: 194 RSLTFSPDSQLLVTASDDGYIKIYE 218
Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 41/121 (33%), Positives = 68/121 (56%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L TL GH + S+ FSP+ + L ++S D IKI+ T+SGH + +VA+S
Sbjct: 182 LLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYEVQHASLAATLSGHGSWVLNVAFS 241
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
D VS S DK++K+W++S+ C+ T H + V+ +N + IVS + D+ + ++
Sbjct: 242 PDDTHFVSSSSDKSVKVWDVSARTCVHTFLDHQDQVWGVKYNKNGSKIVSVADDQEIHVY 301
Query: 139 D 139
D
Sbjct: 302 D 302
>POMBASE|SPBC15D4.14 [details] [associations]
symbol:taf73 "transcription factor TFIID complex subunit
Taf5-like" species:4896 "Schizosaccharomyces pombe" [GO:0000991
"core RNA polymerase II binding transcription factor activity"
evidence=IC] [GO:0005669 "transcription factor TFIID complex"
evidence=TAS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=TAS] [GO:0030071 "regulation of mitotic
metaphase/anaphase transition" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
PomBase:SPBC15D4.14 GO:GO:0005829 GO:GO:0006355 GO:GO:0030071
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0006367
GO:GO:0000991 GO:GO:0005669 KO:K03130 HOGENOM:HOG000212424
EMBL:AB039954 PIR:T39490 RefSeq:NP_596254.1
ProteinModelPortal:O74319 IntAct:O74319 STRING:O74319
EnsemblFungi:SPBC15D4.14.1 GeneID:2539882 KEGG:spo:SPBC15D4.14
OMA:CATISED OrthoDB:EOG4CRQ92 NextBio:20801027 Uniprot:O74319
Length = 642
Score = 300 (110.7 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 62/205 (30%), Positives = 102/205 (49%)
Query: 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 79
K +L GHT+ V V SP E++ S S D ++W +GH I DV +S
Sbjct: 396 KSSLIGHTRPVFGVSISPQKEFILSCSEDGFTRLWSKDTKSTIVKYAGHNAPIWDVQFSP 455
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
+ S D+T ++W++ L+ GH N V C +F+P + + +GS D + R+WD
Sbjct: 456 FGYYFATASHDQTARLWDVEHAAPLRVFVGHQNDVDCVSFHPNAAYLATGSSDHTTRMWD 515
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
VRTG ++ AH PVSA+ + DG + S+ G+ ++WD S + + +
Sbjct: 516 VRTGGTVRVFNAHHSPVSALCMSADGLSLASADESGIIKVWDLRSSNQHVSFVKHSSIVY 575
Query: 200 SFVKFSPNGKYILAATLDNTLKLWD 224
S + FS + K +++ D + WD
Sbjct: 576 S-LSFSYDNKILVSGGADTDVNFWD 599
Score = 175 (66.7 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 36/117 (30%), Positives = 61/117 (52%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLL 84
GH V V F PN +LA+ S+D ++W G + + H +S + S+D L
Sbjct: 485 GHQNDVDCVSFHPNAAYLATGSSDHTTRMWDVRTGGTVRVFNAHHSPVSALCMSADGLSL 544
Query: 85 VSGSDDKTLKIWEL-SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 140
S + +K+W+L SS + + +K HS+ V+ +F+ + ++VSG D V WD+
Sbjct: 545 ASADESGIIKVWDLRSSNQHVSFVK-HSSIVYSLSFSYDNKILVSGGADTDVNFWDL 600
Score = 116 (45.9 bits), Expect = 0.00042, P = 0.00042
Identities = 38/139 (27%), Positives = 61/139 (43%)
Query: 106 TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD-VRTG---------KCLK--TLPAHS 153
T+ + V C F+ +++ G D S+ ++ G + L+ +L H+
Sbjct: 344 TMHNTLSAVNCAAFSDDASMFALGCADSSIHLYSSTNNGPQPLVGSQNEPLQKSSLIGHT 403
Query: 154 DPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID--DDNPPVSFVKFSPNGKYI 211
PV V + I+S S DG R+W S T++ N P+ V+FSP G Y
Sbjct: 404 RPVFGVSISPQKEFILSCSEDGFTRLW---SKDTKSTIVKYAGHNAPIWDVQFSPFGYYF 460
Query: 212 LAATLDNTLKLWDSKVVTP 230
A+ D T +LWD + P
Sbjct: 461 ATASHDQTARLWDVEHAAP 479
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 299 (110.3 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 58/204 (28%), Positives = 109/204 (53%)
Query: 23 LAGHTKAVSSVKFSPN-GEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
+ H+ VSS+ + G LA+ D + +W +++GH I + S+
Sbjct: 16 IVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKE 75
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
L+V+GS ++++W+L + K L+TL GH + +F+P + + SGS D +++WDVR
Sbjct: 76 ELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVR 135
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 201
C+ +H+ V + F+ DG + S++ D ++WD +G+ + P V+
Sbjct: 136 RKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGP-VNV 194
Query: 202 VKFSPNGKYILAA-TLDNTLKLWD 224
V+F P+ +Y+LA+ + D T++ WD
Sbjct: 195 VEFHPS-EYLLASGSSDRTIRFWD 217
Score = 276 (102.2 bits), Expect = 3.5e-23, P = 3.5e-23
Identities = 55/187 (29%), Positives = 93/187 (49%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
+L GHT + S++ S E + + S I++W K +T+ GHK I + +
Sbjct: 58 SLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYG 117
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
+ SGS D +K+W++ C+ K H+ V C F+P + S + D +V++WD+
Sbjct: 118 SFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLT 177
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 201
GK + HS PV+ V F+ L+ S S D R WD + + I+++ PV
Sbjct: 178 AGKVMFEFTGHSGPVNVVEFHPSEYLLASGSSDRTIRFWDLEKFHVV-SCIEEEATPVRC 236
Query: 202 VKFSPNG 208
+ F+P+G
Sbjct: 237 ILFNPDG 243
Score = 247 (92.0 bits), Expect = 4.8e-20, P = 4.8e-20
Identities = 55/172 (31%), Positives = 86/172 (50%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY-DGKFEKTISGHKLGISDVAWSSD 80
TL GH + S+ F P G ++AS S D IK+W G K S H + + +S D
Sbjct: 100 TLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKS-HTQAVRCLRFSPD 158
Query: 81 SRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 140
+ L S +DD T+K+W+L++GK + GHS V F+P L+ SGS D ++R WD+
Sbjct: 159 GKWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHPSEYLLASGSSDRTIRFWDL 218
Query: 141 RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLI 192
+ + + PV + FN DG + D L R++ +C ++
Sbjct: 219 EKFHVVSCIEEEATPVRCILFNPDGCCLYGGFQDSL-RVYGWEPERCFDVVV 269
Score = 203 (76.5 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 40/125 (32%), Positives = 67/125 (53%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 80
F HT+AV ++FSP+G+WLAS++ D +K+W GK +GH ++ V +
Sbjct: 141 FKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHPS 200
Query: 81 SRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 140
LL SGS D+T++ W+L + ++ + V C FNP + G F +S+R++
Sbjct: 201 EYLLASGSSDRTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLYGG-FQDSLRVYGW 259
Query: 141 RTGKC 145
+C
Sbjct: 260 EPERC 264
>ZFIN|ZDB-GENE-030131-6305 [details] [associations]
symbol:fbxw11a "F-box and WD-40 domain protein
11a" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-030131-6305 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
HSSP:Q9Y297 GeneTree:ENSGT00690000101849 EMBL:CABZ01001943
EMBL:CABZ01001944 EMBL:CABZ01001945 EMBL:CABZ01001946 EMBL:BC045356
IPI:IPI00502564 RefSeq:NP_958467.1 UniGene:Dr.78612 SMR:Q7ZVZ1
STRING:Q7ZVZ1 Ensembl:ENSDART00000036901 GeneID:334373
KEGG:dre:334373 CTD:334373 OMA:MESQINT NextBio:20810369
Uniprot:Q7ZVZ1
Length = 527
Score = 296 (109.3 bits), Expect = 1.2e-25, P = 1.2e-25
Identities = 69/215 (32%), Positives = 117/215 (54%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW---GAYDGKFEKTISGHKLGISDVAWS 78
TL H +AV ++F NG + + S D+ I +W A D + + GH+ ++ V +
Sbjct: 300 TLIHHNEAVLHLRFC-NG-LMVTCSKDRSIAVWDMASATDISLRRVLVGHRAAVNVVDF- 356
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
D + +VS S D+T+K+W S+ + ++TL GH + C + + L+VSGS D ++R+W
Sbjct: 357 -DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLW 413
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT---------ASGQCLK 189
D+ G CL+ L H + V + F D IVS +YDG ++WD AS CL+
Sbjct: 414 DIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLR 471
Query: 190 TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
TL++ V ++F I++++ D+T+ +WD
Sbjct: 472 TLVEHSGR-VFRLQFDEF--QIISSSHDDTILIWD 503
Score = 289 (106.8 bits), Expect = 7.1e-25, P = 7.1e-25
Identities = 63/172 (36%), Positives = 100/172 (58%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L+ L GH AV+ V F + +++ S+S D+ IK+W +F +T++GHK GI+ + +
Sbjct: 340 LRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR 397
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
RL+VSGS D T+++W++ G CL+ L+GH V C F+ + IVSG++D +++W
Sbjct: 398 D--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVW 453
Query: 139 DVRTGK---------CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181
D++ CL+TL HS V + F D I+SSS+D IWD
Sbjct: 454 DLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIWD 503
Score = 226 (84.6 bits), Expect = 5.5e-18, P = 5.5e-18
Identities = 58/202 (28%), Positives = 111/202 (54%)
Query: 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV 85
++K V +++ + + + S D IKIW + K ++GH G S + D R++V
Sbjct: 224 NSKGVYCLQY--DDDKIISGLRDNSIKIWDKQSLECLKVLTGHT-G-SVLCLQYDERVIV 279
Query: 86 SGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 145
+GS D T+++W++SSG+ L TL H+ V F + L+V+ S D S+ +WD+ +
Sbjct: 280 TGSSDSTVRVWDVSSGEVLNTLIHHNEAVLHLRFC--NGLMVTCSKDRSIAVWDMASATD 337
Query: 146 L---KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 202
+ + L H V+ V F D IVS+S D ++W T++ + ++TL + ++ +
Sbjct: 338 ISLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTL-NGHKRGIACL 394
Query: 203 KFSPNGKYILAATLDNTLKLWD 224
++ + +++ + DNT++LWD
Sbjct: 395 QY--RDRLVVSGSSDNTIRLWD 414
Score = 226 (84.6 bits), Expect = 5.5e-18, P = 5.5e-18
Identities = 57/218 (26%), Positives = 111/218 (50%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
L GHT +V +++ + + S+D +++W G+ T+ H + + + +
Sbjct: 261 LTGHTGSVLCLQYDERV--IVTGSSDSTVRVWDVSSGEVLNTLIHHNEAVLHLRFCNG-- 316
Query: 83 LLVSGSDDKTLKIWELSSGKCL---KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
L+V+ S D+++ +W+++S + + L GH V +F+ + IVS S D ++++W
Sbjct: 317 LMVTCSKDRSIAVWDMASATDISLRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIKVWS 374
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
T + ++TL H ++ + + RD L+VS S D R+WD G CL+ L + V
Sbjct: 375 TSTCEFVRTLNGHKRGIACLQY-RD-RLVVSGSSDNTIRLWDIECGACLRVL-EGHEELV 431
Query: 200 SFVKFSPNGKYILAATLDNTLKLWDSKV-VTPAIICST 236
++F + K I++ D +K+WD + + P ST
Sbjct: 432 RCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPAST 467
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 297 (109.6 bits), Expect = 1.3e-25, P = 1.3e-25
Identities = 58/204 (28%), Positives = 107/204 (52%)
Query: 23 LAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
+ H VSS+ +G LA+ D + +W +++GH + V ++
Sbjct: 16 IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPE 75
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
L+V+GS ++++W+L + K L+TL GH + +F+P + SGS D ++++WD+R
Sbjct: 76 ELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR 135
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 201
C+ HS V + F+ DG + S++ D ++WD +G+ + PV+
Sbjct: 136 RKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEF-PGHTGPVNV 194
Query: 202 VKFSPNGKYILAA-TLDNTLKLWD 224
V+F PN +Y+LA+ + D T++ WD
Sbjct: 195 VEFHPN-EYLLASGSSDRTIRFWD 217
Score = 283 (104.7 bits), Expect = 4.5e-24, P = 4.5e-24
Identities = 55/180 (30%), Positives = 91/180 (50%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
+L GHT V SV+ + E + + S I++W K +T+ GHK I + +
Sbjct: 58 SLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYG 117
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
+ SGS D +K+W++ C+ +GHS V C F+P + S + D +V++WD+
Sbjct: 118 EFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLT 177
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 201
GK + P H+ PV+ V F+ + L+ S S D R WD Q + + I+ + PV +
Sbjct: 178 AGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVV-SCIEGEPGPVRY 236
Score = 184 (69.8 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 52/187 (27%), Positives = 89/187 (47%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 80
F GH++AV ++FSP+G+WLAS++ D +K+W GK GH ++ V + +
Sbjct: 141 FRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPN 200
Query: 81 SRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYV-----FCCNFNPQSNLI-------VS 128
LL SGS D+T++ W+L + + ++G V + +P ++ VS
Sbjct: 201 EYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRYAGSWVVGLSPPPKVVGCRYGAGVS 260
Query: 129 GSFDESVRIWD-VRTG--KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 185
S S ++ + T L+ P HS +V FN DG + S D L R++
Sbjct: 261 RSHHRSCSLFPGLPTAFPDFLRPTP-HSRLPRSVLFNPDGCCLYSGCQDSL-RVYGWEPE 318
Query: 186 QCLKTLI 192
+C ++
Sbjct: 319 RCFDVVL 325
>UNIPROTKB|Q9NVX2 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9606
"Homo sapiens" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602
OrthoDB:EOG4BCDMS EMBL:AK001320 EMBL:AB209111 EMBL:AC022916
EMBL:BC002884 EMBL:BC012075 EMBL:AJ005257 IPI:IPI00018196
IPI:IPI00556116 RefSeq:NP_001014445.1 RefSeq:NP_060566.2
UniGene:Hs.85570 ProteinModelPortal:Q9NVX2 SMR:Q9NVX2 IntAct:Q9NVX2
MINT:MINT-1474299 STRING:Q9NVX2 PhosphoSite:Q9NVX2 DMDM:296439488
SWISS-2DPAGE:Q9NVX2 PaxDb:Q9NVX2 PRIDE:Q9NVX2
Ensembl:ENST00000360831 Ensembl:ENST00000442241 GeneID:54475
KEGG:hsa:54475 UCSC:uc002hiy.1 UCSC:uc002hiz.1
GeneCards:GC17M033458 HGNC:HGNC:19889 HPA:HPA018807
neXtProt:NX_Q9NVX2 PharmGKB:PA142671263 GenomeRNAi:54475
NextBio:56780 ArrayExpress:Q9NVX2 Bgee:Q9NVX2 CleanEx:HS_NLE1
Genevestigator:Q9NVX2 GermOnline:ENSG00000073536 Uniprot:Q9NVX2
Length = 485
Score = 294 (108.6 bits), Expect = 1.3e-25, P = 1.3e-25
Identities = 62/176 (35%), Positives = 97/176 (55%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
+L GH++AV SV FSP G++LAS S D ++ W T GH+ + ++WS D
Sbjct: 109 SLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDG 168
Query: 82 RLLVSGSDDKTLKIWELSSGKCL-KTLKGHSNYVFCCNF-----NPQSNLIVSGSFDESV 135
R L SG + + +W+ S+GK + +TL GHS ++ ++ NP+ + S S D SV
Sbjct: 169 RKLASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPECRYVASSSKDGSV 228
Query: 136 RIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 191
RIWD G+C + L H+ V+ + + DG L+ S+S D ++W G +TL
Sbjct: 229 RIWDTTAGRCERILTGHTQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRTL 283
Score = 266 (98.7 bits), Expect = 1.8e-22, P = 1.8e-22
Identities = 47/116 (40%), Positives = 73/116 (62%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
+ GH ++ V FSP+ +AS+S DK IK+W GK+ ++ GH + +AWS+DSR
Sbjct: 368 MTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSR 427
Query: 83 LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
LLVSGS D TLK+W++ + K L GH++ V+ +++P + SG D+ +RIW
Sbjct: 428 LLVSGSSDSTLKVWDVKAQKLAMDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 257 (95.5 bits), Expect = 1.8e-21, P = 1.8e-21
Identities = 54/142 (38%), Positives = 84/142 (59%)
Query: 40 EWLASSSADKLIKIWGAYDGKFEKT-ISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWEL 98
E L S S D + +W + K T ++GH+ I+ V +S DSR++ S S DK++K+W+
Sbjct: 342 ERLVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASFDKSIKLWDG 401
Query: 99 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSA 158
+GK L +L+GH V+ ++ S L+VSGS D ++++WDV+ K LP H+D V A
Sbjct: 402 RTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAMDLPGHADEVYA 461
Query: 159 VHFNRDGSLIVSSSYDGLCRIW 180
V ++ DG + S D RIW
Sbjct: 462 VDWSPDGQRVASGGKDKCLRIW 483
Score = 218 (81.8 bits), Expect = 3.3e-17, P = 3.3e-17
Identities = 58/207 (28%), Positives = 106/207 (51%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
L GHT++V+ +++ +G L S+S D+ IK+W A+DG +T+ GH ++ +A S+D
Sbjct: 242 LTGHTQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYA 300
Query: 83 LLVSGSDDKTLKIWELSSGKCLKTLKGH--SNYVFCCNFNPQSNLIVSGSFDESVRIWD- 139
L + + L+ LK S Y P+ +VSGS D ++ +W
Sbjct: 301 LRTGAFEPAEASVNPQDLQGSLQELKERALSRYNLVRGQGPER--LVSGSDDFTLFLWSP 358
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
K L + H ++ V F+ D ++ S+S+D ++WD +G+ L +L V
Sbjct: 359 AEDKKPLTRMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASL-RGHVAAV 417
Query: 200 SFVKFSPNGKYILAATLDNTLKLWDSK 226
+ +S + + +++ + D+TLK+WD K
Sbjct: 418 YQIAWSADSRLLVSGSSDSTLKVWDVK 444
Score = 209 (78.6 bits), Expect = 3.2e-16, P = 3.2e-16
Identities = 46/153 (30%), Positives = 80/153 (52%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-FEKTISGHKLGISDVAW-- 77
FT GH V S+ +SP+G LAS + I +W GK +T++GH I+ ++W
Sbjct: 150 FTCKGHRHWVLSISWSPDGRKLASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEP 209
Query: 78 ---SSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 134
+ + R + S S D +++IW+ ++G+C + L GH+ V C + L+ S S D +
Sbjct: 210 LHANPECRYVASSSKDGSVRIWDTTAGRCERILTGHTQSVTCLRWGGDG-LLYSASQDRT 268
Query: 135 VRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSL 167
+++W G +TL H V+ + + D +L
Sbjct: 269 IKVWRAHDGVLCRTLQGHGHWVNTMALSTDYAL 301
Score = 157 (60.3 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 36/129 (27%), Positives = 67/129 (51%)
Query: 102 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHF 161
+C +L+GHS V F+P + SGS D +VR WD+ T T H V ++ +
Sbjct: 105 RCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISW 164
Query: 162 NRDGSLIVSSSYDGLCRIWDTASG-QCLKTLIDDDN--PPVSF--VKFSPNGKYILAATL 216
+ DG + S +G +WD ++G Q +TL +S+ + +P +Y+ +++
Sbjct: 165 SPDGRKLASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPECRYVASSSK 224
Query: 217 DNTLKLWDS 225
D ++++WD+
Sbjct: 225 DGSVRIWDT 233
Score = 131 (51.2 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 26/75 (34%), Positives = 38/75 (50%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
+L GH AV + +S + L S S+D +K+W K + GH + V WS D
Sbjct: 409 SLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAMDLPGHADEVYAVDWSPDG 468
Query: 82 RLLVSGSDDKTLKIW 96
+ + SG DK L+IW
Sbjct: 469 QRVASGGKDKCLRIW 483
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 294 (108.6 bits), Expect = 1.3e-25, P = 1.3e-25
Identities = 60/176 (34%), Positives = 97/176 (55%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
+L GH++AV SV FSP G++LAS S D ++ W T GH+ + ++WS D
Sbjct: 110 SLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDG 169
Query: 82 RLLVSGSDDKTLKIWELSSGKCL-KTLKGHSNYVFCCNF-----NPQSNLIVSGSFDESV 135
+ L SG + + +W+ S+GK + + L GHS ++ ++ NP+ + S S D SV
Sbjct: 170 KKLASGCKNGQILLWDPSTGKQVGRALTGHSKWITALSWEPLHANPECRYVASSSKDGSV 229
Query: 136 RIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 191
R+WD G+C +TL H+ V+ + + DG L+ S+S D ++W G +TL
Sbjct: 230 RVWDTTAGRCERTLTGHAQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRTL 284
Score = 266 (98.7 bits), Expect = 1.8e-22, P = 1.8e-22
Identities = 47/116 (40%), Positives = 73/116 (62%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
+ GH ++ V FSP+ +AS+S DK IK+W GK+ ++ GH + +AWS+DSR
Sbjct: 369 MTGHQALINQVVFSPDSRVIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSR 428
Query: 83 LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
LLVSGS D TLK+W++ + K L GH++ V+ +++P + SG D+ +RIW
Sbjct: 429 LLVSGSSDSTLKVWDVKAQKLSTDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 484
Score = 257 (95.5 bits), Expect = 1.8e-21, P = 1.8e-21
Identities = 55/142 (38%), Positives = 84/142 (59%)
Query: 40 EWLASSSADKLIKIWG-AYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWEL 98
E L S S D + +W A D K ++GH+ I+ V +S DSR++ S S DK++K+W+
Sbjct: 343 ERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVVFSPDSRVIASASFDKSIKLWDG 402
Query: 99 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSA 158
+GK L +L+GH V+ ++ S L+VSGS D ++++WDV+ K LP H+D V A
Sbjct: 403 RTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLSTDLPGHADEVYA 462
Query: 159 VHFNRDGSLIVSSSYDGLCRIW 180
V ++ DG + S D RIW
Sbjct: 463 VDWSPDGQRVASGGKDKCLRIW 484
Score = 218 (81.8 bits), Expect = 3.3e-17, P = 3.3e-17
Identities = 59/208 (28%), Positives = 106/208 (50%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GH ++V+ +++ +G L S+S D+ IK+W A+DG +T+ GH ++ +A S+D
Sbjct: 242 TLTGHAQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDY 300
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGH--SNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
L + + L+ LK S Y P+ +VSGS D ++ +W
Sbjct: 301 ALRTGAFEPAEASVNAQDLRGSLQELKERALSRYNLVRGQGPER--LVSGSDDFTLFLWS 358
Query: 140 -VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 198
K L + H ++ V F+ D +I S+S+D ++WD +G+ L +L
Sbjct: 359 PAEDKKPLARMTGHQALINQVVFSPDSRVIASASFDKSIKLWDGRTGKYLASL-RGHVAA 417
Query: 199 VSFVKFSPNGKYILAATLDNTLKLWDSK 226
V + +S + + +++ + D+TLK+WD K
Sbjct: 418 VYQIAWSADSRLLVSGSSDSTLKVWDVK 445
Score = 209 (78.6 bits), Expect = 3.2e-16, P = 3.2e-16
Identities = 45/153 (29%), Positives = 81/153 (52%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-FEKTISGHKLGISDVAW-- 77
FT GH V S+ +SP+G+ LAS + I +W GK + ++GH I+ ++W
Sbjct: 151 FTCQGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGKQVGRALTGHSKWITALSWEP 210
Query: 78 ---SSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 134
+ + R + S S D ++++W+ ++G+C +TL GH+ V C + L+ S S D +
Sbjct: 211 LHANPECRYVASSSKDGSVRVWDTTAGRCERTLTGHAQSVTCLRWGGDG-LLYSASQDRT 269
Query: 135 VRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSL 167
+++W G +TL H V+ + + D +L
Sbjct: 270 IKVWRAHDGVLCRTLQGHGHWVNTMALSTDYAL 302
Score = 156 (60.0 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 32/129 (24%), Positives = 67/129 (51%)
Query: 102 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHF 161
+C +L+GHS V F+P + SGS D +VR WD+ T T H V ++ +
Sbjct: 106 RCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISW 165
Query: 162 NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKF-----SPNGKYILAATL 216
+ DG + S +G +WD ++G+ + + + ++ + + +P +Y+ +++
Sbjct: 166 SPDGKKLASGCKNGQILLWDPSTGKQVGRALTGHSKWITALSWEPLHANPECRYVASSSK 225
Query: 217 DNTLKLWDS 225
D ++++WD+
Sbjct: 226 DGSVRVWDT 234
Score = 132 (51.5 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 26/75 (34%), Positives = 38/75 (50%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
+L GH AV + +S + L S S+D +K+W K + GH + V WS D
Sbjct: 410 SLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLSTDLPGHADEVYAVDWSPDG 469
Query: 82 RLLVSGSDDKTLKIW 96
+ + SG DK L+IW
Sbjct: 470 QRVASGGKDKCLRIW 484
>TAIR|locus:2089303 [details] [associations]
symbol:AT3G16650 "AT3G16650" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AB022217 GO:GO:0080008 HOGENOM:HOG000207595
ProtClustDB:CLSN2685622 EMBL:X82826 EMBL:AY054181 EMBL:BT020378
IPI:IPI00521576 RefSeq:NP_566557.1 UniGene:At.104
ProteinModelPortal:Q39190 SMR:Q39190 IntAct:Q39190 STRING:Q39190
EnsemblPlants:AT3G16650.1 GeneID:820917 KEGG:ath:AT3G16650
GeneFarm:2851 TAIR:At3g16650 InParanoid:Q39190 OMA:HKKTVRA
PhylomeDB:Q39190 Genevestigator:Q39190 GermOnline:AT3G16650
Uniprot:Q39190
Length = 479
Score = 293 (108.2 bits), Expect = 1.6e-25, P = 1.6e-25
Identities = 62/199 (31%), Positives = 101/199 (50%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
L GH V SV F P+ EW + SAD+ IKIW G + T++GH + +A S+
Sbjct: 166 LQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHT 225
Query: 83 LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 142
+ S DDK +K W+L K +++ GH + V+C +P +++++G D R+WD+RT
Sbjct: 226 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRVWDIRT 285
Query: 143 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 202
+ LP SD S + D +++ S+D + WD G+ + T I + V +
Sbjct: 286 KMQIFVLPHDSDVFSVLARPTDPQ-VITGSHDSTIKFWDLRYGKSMAT-ITNHKKTVRAM 343
Query: 203 KFSPNGKYILAATLDNTLK 221
P ++A+ DN K
Sbjct: 344 ALHPKENDFVSASADNIKK 362
Score = 197 (74.4 bits), Expect = 6.2e-15, P = 6.2e-15
Identities = 50/209 (23%), Positives = 94/209 (44%)
Query: 18 VLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW 77
VLK TL GH V + S ++ S+ DK +K W K ++ GH G+ +A
Sbjct: 203 VLKLTLTGHIGQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLAL 262
Query: 78 SSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 137
++++G D ++W++ + + L H + VF P +++GS D +++
Sbjct: 263 HPTLDVVLTGGRDSVCRVWDIRTKMQIFVLP-HDSDVFSVLARPTDPQVITGSHDSTIKF 321
Query: 138 WDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 197
WD+R GK + T+ H V A+ + + VS+S D + + + G+ ++
Sbjct: 322 WDLRYGKSMATITNHKKTVRAMALHPKENDFVSASADNIKK-FSLPKGEFCHNMLSLQRD 380
Query: 198 PVSFVKFSPNGKYILAATLDNTLKLWDSK 226
++ V + +G + L WD K
Sbjct: 381 IINAVAVNEDGVMVTGGDKGG-LWFWDWK 408
Score = 188 (71.2 bits), Expect = 5.9e-14, P = 5.9e-14
Identities = 43/171 (25%), Positives = 80/171 (46%)
Query: 54 WGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNY 113
W A K + + GH + VA+ + +GS D+T+KIW++++G TL GH
Sbjct: 156 WHA-PWKNYRVLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQ 214
Query: 114 VFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY 173
V + + + S D+ V+ WD+ K +++ H V + + ++++
Sbjct: 215 VRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGGR 274
Query: 174 DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
D +CR+WD + + L D + V V P ++ + D+T+K WD
Sbjct: 275 DSVCRVWDIRTKMQIFVLPHDSD--VFSVLARPTDPQVITGSHDSTIKFWD 323
Score = 184 (69.8 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 54/224 (24%), Positives = 96/224 (42%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLL 84
GH V + P + + + D + ++W K + + H + V +
Sbjct: 252 GHLHGVYCLALHPTLDVVLTGGRDSVCRVWDIRT-KMQIFVLPHDSDVFSVLARPTDPQV 310
Query: 85 VSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK 144
++GS D T+K W+L GK + T+ H V +P+ N VS S D +++ + + G+
Sbjct: 311 ITGSHDSTIKFWDLRYGKSMATITNHKKTVRAMALHPKENDFVSASAD-NIKKFSLPKGE 369
Query: 145 -CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG---QCLKTLID----DDN 196
C L D ++AV N DG ++ GL WD SG Q +T++ +
Sbjct: 370 FCHNMLSLQRDIINAVAVNEDGVMVTGGDKGGLW-FWDWKSGHNFQRAETIVQPGSLESE 428
Query: 197 PPVSFVKFSPNGKYILAATLDNTLKLW-DSKVVTPAIICSTPLN 239
+ + G ++ D T+K+W + + TP + PLN
Sbjct: 429 AGIYAACYDQTGSRLVTCEGDKTIKMWKEDEDATPE---THPLN 469
>UNIPROTKB|Q229Z6 [details] [associations]
symbol:TTHERM_01308010 "POC1 centriolar protein homolog"
species:312017 "Tetrahymena thermophila SB210" [GO:0005932
"microtubule basal body" evidence=IDA] [GO:0051297 "centrosome
organization" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GO:GO:0030030 KO:K16482 EMBL:GG662475 RefSeq:XP_001029778.1
UniGene:Tth.7377 ProteinModelPortal:Q229Z6 EnsemblProtists:EAR82115
GeneID:7835570 KEGG:tet:TTHERM_01308010 ProtClustDB:CLSZ2449456
Uniprot:Q229Z6
Length = 634
Score = 297 (109.6 bits), Expect = 1.7e-25, P = 1.7e-25
Identities = 74/220 (33%), Positives = 113/220 (51%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW-GAYDGKFEKTISGHKLGISDVAWSS 79
F GH AV VK+SP+GE +AS D+ I++W K I H I +++S+
Sbjct: 83 FKFVGHKGAVYCVKYSPDGETIASCGQDRQIRLWQNTVQSKCS-IIKAHCGAIRSMSFSA 141
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
D L+S SDDKTLK+W L K + + GH N+V +P L+ SGS D++V +WD
Sbjct: 142 DGGYLLSSSDDKTLKLWRLQDKKFMCSFAGHKNWVRSGVISPDMRLVASGSDDKTVMLWD 201
Query: 140 VRTGKCLK---TLPA------------HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 184
+ K + TL H D VS V F+ DG+ ++SSS+D +I D S
Sbjct: 202 LNFQKIVSKYSTLDDNVKISQINSYSDHMDTVSQVLFHPDGTCLISSSFDHKIKITDIRS 261
Query: 185 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
+ ++ D V+ + P G ++ +A D+ +K+WD
Sbjct: 262 NKLIQHYNAHD-AQVNSISIHPTGYFLASAGSDSKIKIWD 300
Score = 289 (106.8 bits), Expect = 1.3e-24, P = 1.3e-24
Identities = 67/216 (31%), Positives = 109/216 (50%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
+ H A+ S+ FS +G +L SSS DK +K+W D KF + +GHK + S D R
Sbjct: 127 IKAHCGAIRSMSFSADGGYLLSSSDDKTLKLWRLQDKKFMCSFAGHKNWVRSGVISPDMR 186
Query: 83 LLVSGSDDKTLKIWELSSGKCLK---TL------------KGHSNYVFCCNFNPQSNLIV 127
L+ SGSDDKT+ +W+L+ K + TL H + V F+P ++
Sbjct: 187 LVASGSDDKTVMLWDLNFQKIVSKYSTLDDNVKISQINSYSDHMDTVSQVLFHPDGTCLI 246
Query: 128 SGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC 187
S SFD ++I D+R+ K ++ AH V+++ + G + S+ D +IWD G+
Sbjct: 247 SSSFDHKIKITDIRSNKLIQHYNAHDAQVNSISIHPTGYFLASAGSDSKIKIWDLRQGRQ 306
Query: 188 LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 223
+ TL +D ++ V+F+ +G Y N +W
Sbjct: 307 IYTLYSNDKD-ITTVQFNQSGDYFATGGSQNLCMVW 341
Score = 202 (76.2 bits), Expect = 3.1e-15, P = 3.1e-15
Identities = 59/217 (27%), Positives = 95/217 (43%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW--------GAY---DGKFE----KTIS 66
+ AGH V S SP+ +AS S DK + +W Y D + + S
Sbjct: 168 SFAGHKNWVRSGVISPDMRLVASGSDDKTVMLWDLNFQKIVSKYSTLDDNVKISQINSYS 227
Query: 67 GHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLI 126
H +S V + D L+S S D +KI ++ S K ++ H V + +P +
Sbjct: 228 DHMDTVSQVLFHPDGTCLISSSFDHKIKITDIRSNKLIQHYNAHDAQVNSISIHPTGYFL 287
Query: 127 VSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 186
S D ++IWD+R G+ + TL ++ ++ V FN+ G + LC +W T Q
Sbjct: 288 ASAGSDSKIKIWDLRQGRQIYTLYSNDKDITTVQFNQSGDYFATGGSQNLCMVWKTNFDQ 347
Query: 187 CLKTLIDDDNPPV--SFVKFSPNGKYILAATLDNTLK 221
++ + V + V++S G Y A TL T K
Sbjct: 348 NIQNIEQVQRSTVRQNDVEYSSGGLY--AQTLFKTNK 382
Score = 185 (70.2 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 51/221 (23%), Positives = 99/221 (44%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L + GH ++ F P +AS S D ++ +W + GHK + V +S
Sbjct: 39 LSRSFRGHEDIITCADFDPKMRQVASCSKDSIVYVWNFKPQQRPFKFVGHKGAVYCVKYS 98
Query: 79 SDSRLLVSGSDDKTLKIWELS-SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 137
D + S D+ +++W+ + KC +K H + +F+ ++S S D+++++
Sbjct: 99 PDGETIASCGQDRQIRLWQNTVQSKC-SIIKAHCGAIRSMSFSADGGYLLSSSDDKTLKL 157
Query: 138 WDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLK---TLID- 193
W ++ K + + H + V + + D L+ S S D +WD + + TL D
Sbjct: 158 WRLQDKKFMCSFAGHKNWVRSGVISPDMRLVASGSDDKTVMLWDLNFQKIVSKYSTLDDN 217
Query: 194 ----------DDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
D VS V F P+G +++++ D+ +K+ D
Sbjct: 218 VKISQINSYSDHMDTVSQVLFHPDGTCLISSSFDHKIKITD 258
Score = 172 (65.6 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 51/206 (24%), Positives = 95/206 (46%)
Query: 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 79
K T+A + AV+S K + + L ++S+ K+ + +D ++ GH+ I+ +
Sbjct: 3 KTTIA--SSAVASQKQTQSK--LGNTSS-KITEQQTTHDPALSRSFRGHEDIITCADFDP 57
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW- 138
R + S S D + +W + GH V+C ++P I S D +R+W
Sbjct: 58 KMRQVASCSKDSIVYVWNFKPQQRPFKFVGHKGAVYCVKYSPDGETIASCGQDRQIRLWQ 117
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 198
+ KC + AH + ++ F+ DG ++SSS D ++W + + + N
Sbjct: 118 NTVQSKC-SIIKAHCGAIRSMSFSADGGYLLSSSDDKTLKLWRLQDKKFMCSFAGHKNWV 176
Query: 199 VSFVKFSPNGKYILAATLDNTLKLWD 224
S V SP+ + + + + D T+ LWD
Sbjct: 177 RSGV-ISPDMRLVASGSDDKTVMLWD 201
>POMBASE|SPAC4D7.03 [details] [associations]
symbol:pop2 "F-box/WD repeat protein Pop2" species:4896
"Schizosaccharomyces pombe" [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IC]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=IPI] [GO:0032876
"negative regulation of DNA endoreduplication" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
PomBase:SPAC4D7.03 GO:GO:0007346 GO:GO:0005737 GO:GO:0005635
EMBL:CU329670 GenomeReviews:CU329670_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0006511
GO:GO:0019005 GO:GO:0032876 KO:K03361 OrthoDB:EOG4B2X5M
EMBL:AF038867 EMBL:AF064515 PIR:T43557 RefSeq:NP_594956.1
ProteinModelPortal:O14170 IntAct:O14170 STRING:O14170
EnsemblFungi:SPAC4D7.03.1 GeneID:2543514 KEGG:spo:SPAC4D7.03
OMA:RIANMEC NextBio:20804524 Uniprot:O14170
Length = 703
Score = 298 (110.0 bits), Expect = 1.7e-25, P = 1.7e-25
Identities = 65/173 (37%), Positives = 101/173 (58%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GHT +V ++ S G+ L S S D I+IW G+ + GH L I V + +
Sbjct: 502 TLIGHTDSVRTI--SGYGDILVSGSYDSSIRIWRVSTGECLYHLRGHSLRIYSVLYEPER 559
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
+ +SGS DK++++W+LS+G C L+GH +V N N ++SGS D ++RIWD+
Sbjct: 560 NICISGSMDKSIRVWDLSTGTCKYVLEGHDAFVTLLNVF--QNRLISGSADSTIRIWDLN 617
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD 194
TGK L LP++S +S+ F D I+S + DG ++WD +G+ L+ L+ D
Sbjct: 618 TGKPLMVLPSNSGYISS--FVSDEHKIISGN-DGSVKLWDVRTGKLLRFLLTD 667
Score = 259 (96.2 bits), Expect = 2.8e-21, P = 2.8e-21
Identities = 58/164 (35%), Positives = 94/164 (57%)
Query: 61 FEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFN 120
F T+ GH + ++ D +LVSGS D +++IW +S+G+CL L+GHS ++ +
Sbjct: 499 FVHTLIGHTDSVRTISGYGD--ILVSGSYDSSIRIWRVSTGECLYHLRGHSLRIYSVLYE 556
Query: 121 PQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 180
P+ N+ +SGS D+S+R+WD+ TG C L H V+ ++ ++ ++S S D RIW
Sbjct: 557 PERNICISGSMDKSIRVWDLSTGTCKYVLEGHDAFVTLLNVFQNR--LISGSADSTIRIW 614
Query: 181 DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
D +G+ L L + SFV S K I++ D ++KLWD
Sbjct: 615 DLNTGKPLMVLPSNSGYISSFV--SDEHK-IISGN-DGSVKLWD 654
Score = 204 (76.9 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 46/129 (35%), Positives = 73/129 (56%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 80
+ L GH+ + SV + P S S DK I++W G + + GH ++ + +
Sbjct: 541 YHLRGHSLRIYSVLYEPERNICISGSMDKSIRVWDLSTGTCKYVLEGHDAFVTLL--NVF 598
Query: 81 SRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 140
L+SGS D T++IW+L++GK L L +S Y+ +F + I+SG+ D SV++WDV
Sbjct: 599 QNRLISGSADSTIRIWDLNTGKPLMVLPSNSGYI--SSFVSDEHKIISGN-DGSVKLWDV 655
Query: 141 RTGKCLKTL 149
RTGK L+ L
Sbjct: 656 RTGKLLRFL 664
Score = 196 (74.1 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 51/181 (28%), Positives = 90/181 (49%)
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQ----------------- 122
D +VSGS D TL++W+L L ++N + NP
Sbjct: 456 DQPYIVSGSRDHTLRVWKLPKNTDPPYLPDNTNSIDRWEKNPYFVHTLIGHTDSVRTISG 515
Query: 123 -SNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181
+++VSGS+D S+RIW V TG+CL L HS + +V + + ++ +S S D R+WD
Sbjct: 516 YGDILVSGSYDSSIRIWRVSTGECLYHLRGHSLRIYSVLYEPERNICISGSMDKSIRVWD 575
Query: 182 TASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTPLNLN 241
++G C K +++ + V+ + N +++ + D+T+++WD P ++ P N
Sbjct: 576 LSTGTC-KYVLEGHDAFVTLLNVFQNR--LISGSADSTIRIWDLNTGKPLMVL--PSNSG 630
Query: 242 Y 242
Y
Sbjct: 631 Y 631
Score = 135 (52.6 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 36/129 (27%), Positives = 59/129 (45%)
Query: 42 LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSG 101
+ ++S I+I A G E + GHK G+ V ++ LVSGS DKT+++W +
Sbjct: 364 IITTSGSGTIQIHNAITGVLEARLEGHKEGVWAVKIHENT--LVSGSIDKTVRVWNIEKA 421
Query: 102 KCLKTLKGHSNYVFCCNF--------------NPQSNLIVSGSFDESVRIWDVRTGKCLK 147
KC +GH + + C P IVSGS D ++R+W +
Sbjct: 422 KCTHIFRGHISIIRCLEILVPSRLIRHGVEIVEPDQPYIVSGSRDHTLRVWKLPKNTDPP 481
Query: 148 TLPAHSDPV 156
LP +++ +
Sbjct: 482 YLPDNTNSI 490
>UNIPROTKB|F1MFJ6 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024
EMBL:DAAA02002018 EMBL:DAAA02002019 EMBL:DAAA02002020
EMBL:DAAA02002021 EMBL:DAAA02002022 EMBL:DAAA02002023
EMBL:DAAA02002024 IPI:IPI00732449 UniGene:Bt.25104
ProteinModelPortal:F1MFJ6 Ensembl:ENSBTAT00000029211 OMA:GYARIWM
NextBio:20899067 Uniprot:F1MFJ6
Length = 514
Score = 294 (108.6 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 64/226 (28%), Positives = 117/226 (51%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L TL H + ++K++ G ++ S+ DK IW A+ G+ ++ H DV W
Sbjct: 258 LASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQLFPFHSAPALDVDWQ 317
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
S++ S S D + + +L + +KT +GH+N V ++P NL+ S S D +++IW
Sbjct: 318 SNNTF-ASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIW 376
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGS---------LIVSSSYDGLCRIWDTASGQCLK 189
++ C+ L AH+ + + ++ G ++ S+S+D R+WD G C+
Sbjct: 377 SMKQDNCVHDLQAHNKEIYTIKWSPTGPGTSNPNANLMLASASFDSTVRLWDVDRGICIH 436
Query: 190 TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICS 235
TL P S V FSP+G+Y+ + + D + +W+++ T A++ S
Sbjct: 437 TLTKHQEPVYS-VAFSPDGRYLASGSFDKCVHIWNTQ--TGALVHS 479
Score = 225 (84.3 bits), Expect = 6.6e-18, P = 6.6e-18
Identities = 51/166 (30%), Positives = 82/166 (49%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS--- 78
T GHT V+++K+ P G LAS S D +KIW + H I + WS
Sbjct: 344 TFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTG 403
Query: 79 ------SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 132
+ + +L S S D T+++W++ G C+ TL H V+ F+P + SGSFD
Sbjct: 404 PGTSNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFD 463
Query: 133 ESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LC 177
+ V IW+ +TG + + + + V +N G + +S+ DG +C
Sbjct: 464 KCVHIWNTQTGALVHSYRG-TGGIFEVCWNAAGDKVGASASDGSVC 508
Score = 217 (81.4 bits), Expect = 4.9e-17, P = 4.9e-17
Identities = 61/218 (27%), Positives = 94/218 (43%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE---KTISGHKL--GISDVA- 76
L GH V ++P + LAS S D +IW + + + H + G DV
Sbjct: 165 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPS 224
Query: 77 --------WSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVS 128
W+S+ LL +GS D +IW G TL H +F +N + N I+S
Sbjct: 225 NKDVTSLDWNSEGTLLATGSYDGFARIWT-KDGNLASTLGQHKGPIFALKWNKKGNFILS 283
Query: 129 GSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCL 188
D++ IWD TG+ + P HS P V + + + S S D + + +
Sbjct: 284 AGVDKTTIIWDAHTGEAKQLFPFHSAPALDVDWQSNNTF-ASCSTDMCIHVCKLGQDRPI 342
Query: 189 KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSK 226
KT N V+ +K+ P G + + + D TLK+W K
Sbjct: 343 KTFQGHTNE-VNAIKWDPTGNLLASCSDDMTLKIWSMK 379
Score = 148 (57.2 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 38/128 (29%), Positives = 63/128 (49%)
Query: 23 LAGHTKAVSSVKFSPNGE---------WLASSSADKLIKIWGAYDGKFEKTISGHKLGIS 73
L H K + ++K+SP G LAS+S D +++W G T++ H+ +
Sbjct: 387 LQAHNKEIYTIKWSPTGPGTSNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVY 446
Query: 74 DVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 133
VA+S D R L SGS DK + IW +G + + +G C +N + + + + D
Sbjct: 447 SVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRGTGGIFEVC-WNAAGDKVGASASDG 505
Query: 134 SVRIWDVR 141
SV + D+R
Sbjct: 506 SVCVLDLR 513
>UNIPROTKB|Q9BZK7 [details] [associations]
symbol:TBL1XR1 "F-box-like/WD repeat-containing protein
TBL1XR1" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=IMP] [GO:0003714 "transcription corepressor
activity" evidence=IGI;IDA] [GO:0042393 "histone binding"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISS;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0008013 "beta-catenin binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=IDA] [GO:0000118
"histone deacetylase complex" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0044255 "cellular lipid metabolic process"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_111217 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0044281 EMBL:CH471052 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0007219
GO:GO:0044255 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393
GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AF314544 EMBL:AF268193
EMBL:AK022956 EMBL:BC060320 EMBL:BC113421 IPI:IPI00002922
RefSeq:NP_078941.2 UniGene:Hs.581171 ProteinModelPortal:Q9BZK7
SMR:Q9BZK7 IntAct:Q9BZK7 STRING:Q9BZK7 PhosphoSite:Q9BZK7
DMDM:23396874 PaxDb:Q9BZK7 PRIDE:Q9BZK7 Ensembl:ENST00000430069
Ensembl:ENST00000457928 GeneID:79718 KEGG:hsa:79718 UCSC:uc003fiw.4
CTD:79718 GeneCards:GC03M176737 H-InvDB:HIX0147994 HGNC:HGNC:29529
HPA:HPA019182 MIM:608628 neXtProt:NX_Q9BZK7 PharmGKB:PA134928556
HOGENOM:HOG000220902 HOVERGEN:HBG050240 InParanoid:Q9BZK7
OMA:LANNHAD OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 GenomeRNAi:79718
NextBio:69065 PMAP-CutDB:Q9BZK7 ArrayExpress:Q9BZK7 Bgee:Q9BZK7
CleanEx:HS_TBL1XR1 Genevestigator:Q9BZK7 GermOnline:ENSG00000177565
Uniprot:Q9BZK7
Length = 514
Score = 294 (108.6 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 64/226 (28%), Positives = 117/226 (51%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L TL H + ++K++ G ++ S+ DK IW A+ G+ ++ H DV W
Sbjct: 258 LASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ 317
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
S++ S S D + + +L + +KT +GH+N V ++P NL+ S S D +++IW
Sbjct: 318 SNNTF-ASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIW 376
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGS---------LIVSSSYDGLCRIWDTASGQCLK 189
++ C+ L AH+ + + ++ G ++ S+S+D R+WD G C+
Sbjct: 377 SMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIH 436
Query: 190 TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICS 235
TL P S V FSP+G+Y+ + + D + +W+++ T A++ S
Sbjct: 437 TLTKHQEPVYS-VAFSPDGRYLASGSFDKCVHIWNTQ--TGALVHS 479
Score = 225 (84.3 bits), Expect = 6.6e-18, P = 6.6e-18
Identities = 51/166 (30%), Positives = 82/166 (49%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS--- 78
T GHT V+++K+ P G LAS S D +KIW + H I + WS
Sbjct: 344 TFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTG 403
Query: 79 ------SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 132
+ + +L S S D T+++W++ G C+ TL H V+ F+P + SGSFD
Sbjct: 404 PGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFD 463
Query: 133 ESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LC 177
+ V IW+ +TG + + + + V +N G + +S+ DG +C
Sbjct: 464 KCVHIWNTQTGALVHSYRG-TGGIFEVCWNAAGDKVGASASDGSVC 508
Score = 217 (81.4 bits), Expect = 4.9e-17, P = 4.9e-17
Identities = 61/218 (27%), Positives = 94/218 (43%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE---KTISGHKL--GISDVA- 76
L GH V ++P + LAS S D +IW + + + H + G DV
Sbjct: 165 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPS 224
Query: 77 --------WSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVS 128
W+S+ LL +GS D +IW G TL H +F +N + N I+S
Sbjct: 225 NKDVTSLDWNSEGTLLATGSYDGFARIWT-KDGNLASTLGQHKGPIFALKWNKKGNFILS 283
Query: 129 GSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCL 188
D++ IWD TG+ + P HS P V + + + S S D + + +
Sbjct: 284 AGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTF-ASCSTDMCIHVCKLGQDRPI 342
Query: 189 KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSK 226
KT N V+ +K+ P G + + + D TLK+W K
Sbjct: 343 KTFQGHTNE-VNAIKWDPTGNLLASCSDDMTLKIWSMK 379
Score = 148 (57.2 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 38/128 (29%), Positives = 63/128 (49%)
Query: 23 LAGHTKAVSSVKFSPNGE---------WLASSSADKLIKIWGAYDGKFEKTISGHKLGIS 73
L H K + ++K+SP G LAS+S D +++W G T++ H+ +
Sbjct: 387 LQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVY 446
Query: 74 DVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 133
VA+S D R L SGS DK + IW +G + + +G C +N + + + + D
Sbjct: 447 SVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRGTGGIFEVC-WNAAGDKVGASASDG 505
Query: 134 SVRIWDVR 141
SV + D+R
Sbjct: 506 SVCVLDLR 513
>UNIPROTKB|F1SGD0 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 OMA:GYARIWM
EMBL:CU856317 Ensembl:ENSSSCT00000012871 Uniprot:F1SGD0
Length = 514
Score = 294 (108.6 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 64/226 (28%), Positives = 117/226 (51%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L TL H + ++K++ G ++ S+ DK IW A+ G+ ++ H DV W
Sbjct: 258 LASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ 317
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
S++ S S D + + +L + +KT +GH+N V ++P NL+ S S D +++IW
Sbjct: 318 SNNTF-ASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIW 376
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGS---------LIVSSSYDGLCRIWDTASGQCLK 189
++ C+ L AH+ + + ++ G ++ S+S+D R+WD G C+
Sbjct: 377 SMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIH 436
Query: 190 TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICS 235
TL P S V FSP+G+Y+ + + D + +W+++ T A++ S
Sbjct: 437 TLTKHQEPVYS-VAFSPDGRYLASGSFDKCVHIWNTQ--TGALVHS 479
Score = 225 (84.3 bits), Expect = 6.6e-18, P = 6.6e-18
Identities = 51/166 (30%), Positives = 82/166 (49%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS--- 78
T GHT V+++K+ P G LAS S D +KIW + H I + WS
Sbjct: 344 TFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTG 403
Query: 79 ------SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 132
+ + +L S S D T+++W++ G C+ TL H V+ F+P + SGSFD
Sbjct: 404 PGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFD 463
Query: 133 ESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LC 177
+ V IW+ +TG + + + + V +N G + +S+ DG +C
Sbjct: 464 KCVHIWNTQTGALVHSYRG-TGGIFEVCWNAAGDKVGASASDGSVC 508
Score = 217 (81.4 bits), Expect = 4.9e-17, P = 4.9e-17
Identities = 61/218 (27%), Positives = 94/218 (43%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE---KTISGHKL--GISDVA- 76
L GH V ++P + LAS S D +IW + + + H + G DV
Sbjct: 165 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPS 224
Query: 77 --------WSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVS 128
W+S+ LL +GS D +IW G TL H +F +N + N I+S
Sbjct: 225 NKDVTSLDWNSEGTLLATGSYDGFARIWT-KDGNLASTLGQHKGPIFALKWNKKGNFILS 283
Query: 129 GSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCL 188
D++ IWD TG+ + P HS P V + + + S S D + + +
Sbjct: 284 AGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTF-ASCSTDMCIHVCKLGQDRPI 342
Query: 189 KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSK 226
KT N V+ +K+ P G + + + D TLK+W K
Sbjct: 343 KTFQGHTNE-VNAIKWDPTGNLLASCSDDMTLKIWSMK 379
Score = 148 (57.2 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 38/128 (29%), Positives = 63/128 (49%)
Query: 23 LAGHTKAVSSVKFSPNGE---------WLASSSADKLIKIWGAYDGKFEKTISGHKLGIS 73
L H K + ++K+SP G LAS+S D +++W G T++ H+ +
Sbjct: 387 LQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVY 446
Query: 74 DVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 133
VA+S D R L SGS DK + IW +G + + +G C +N + + + + D
Sbjct: 447 SVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRGTGGIFEVC-WNAAGDKVGASASDG 505
Query: 134 SVRIWDVR 141
SV + D+R
Sbjct: 506 SVCVLDLR 513
>MGI|MGI:2441730 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1X-linked receptor 1"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=ISO;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IC]
[GO:0005876 "spindle microtubule" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=ISO] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] [GO:0044212 "transcription
regulatory region DNA binding" evidence=ISO;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IMP] [GO:0047485
"protein N-terminus binding" evidence=ISO] [GO:0060070 "canonical
Wnt receptor signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:2441730 GO:GO:0017053
GO:GO:0003714 GO:GO:0045892 GO:GO:0005654 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024 KO:K04508
CTD:79718 HOGENOM:HOG000220902 HOVERGEN:HBG050240 OMA:LANNHAD
OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 EMBL:AF268195 EMBL:AK029595
EMBL:AK033347 EMBL:AK036064 EMBL:AK136255 EMBL:BC018512
IPI:IPI00308283 RefSeq:NP_109657.2 UniGene:Mm.202966
UniGene:Mm.446265 ProteinModelPortal:Q8BHJ5 SMR:Q8BHJ5
IntAct:Q8BHJ5 STRING:Q8BHJ5 PhosphoSite:Q8BHJ5 PaxDb:Q8BHJ5
PRIDE:Q8BHJ5 DNASU:81004 Ensembl:ENSMUST00000063988 GeneID:81004
KEGG:mmu:81004 InParanoid:Q8BHJ5 NextBio:350342 Bgee:Q8BHJ5
CleanEx:MM_TBL1XR1 Genevestigator:Q8BHJ5
GermOnline:ENSMUSG00000027630 Uniprot:Q8BHJ5
Length = 514
Score = 294 (108.6 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 64/226 (28%), Positives = 117/226 (51%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L TL H + ++K++ G ++ S+ DK IW A+ G+ ++ H DV W
Sbjct: 258 LASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ 317
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
S++ S S D + + +L + +KT +GH+N V ++P NL+ S S D +++IW
Sbjct: 318 SNNTF-ASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIW 376
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGS---------LIVSSSYDGLCRIWDTASGQCLK 189
++ C+ L AH+ + + ++ G ++ S+S+D R+WD G C+
Sbjct: 377 SMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIH 436
Query: 190 TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICS 235
TL P S V FSP+G+Y+ + + D + +W+++ T A++ S
Sbjct: 437 TLTKHQEPVYS-VAFSPDGRYLASGSFDKCVHIWNTQ--TGALVHS 479
Score = 225 (84.3 bits), Expect = 6.6e-18, P = 6.6e-18
Identities = 51/166 (30%), Positives = 82/166 (49%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS--- 78
T GHT V+++K+ P G LAS S D +KIW + H I + WS
Sbjct: 344 TFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTG 403
Query: 79 ------SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 132
+ + +L S S D T+++W++ G C+ TL H V+ F+P + SGSFD
Sbjct: 404 PGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFD 463
Query: 133 ESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LC 177
+ V IW+ +TG + + + + V +N G + +S+ DG +C
Sbjct: 464 KCVHIWNTQTGALVHSYRG-TGGIFEVCWNAAGDKVGASASDGSVC 508
Score = 217 (81.4 bits), Expect = 4.9e-17, P = 4.9e-17
Identities = 61/218 (27%), Positives = 94/218 (43%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE---KTISGHKL--GISDVA- 76
L GH V ++P + LAS S D +IW + + + H + G DV
Sbjct: 165 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGPTQLVLRHCIREGGQDVPS 224
Query: 77 --------WSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVS 128
W+S+ LL +GS D +IW G TL H +F +N + N I+S
Sbjct: 225 NKDVTSLDWNSEGTLLATGSYDGFARIWT-KDGNLASTLGQHKGPIFALKWNKKGNFILS 283
Query: 129 GSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCL 188
D++ IWD TG+ + P HS P V + + + S S D + + +
Sbjct: 284 AGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTF-ASCSTDMCIHVCKLGQDRPI 342
Query: 189 KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSK 226
KT N V+ +K+ P G + + + D TLK+W K
Sbjct: 343 KTFQGHTNE-VNAIKWDPTGNLLASCSDDMTLKIWSMK 379
Score = 148 (57.2 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 38/128 (29%), Positives = 63/128 (49%)
Query: 23 LAGHTKAVSSVKFSPNGE---------WLASSSADKLIKIWGAYDGKFEKTISGHKLGIS 73
L H K + ++K+SP G LAS+S D +++W G T++ H+ +
Sbjct: 387 LQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVY 446
Query: 74 DVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 133
VA+S D R L SGS DK + IW +G + + +G C +N + + + + D
Sbjct: 447 SVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRGTGGIFEVC-WNAAGDKVGASASDG 505
Query: 134 SVRIWDVR 141
SV + D+R
Sbjct: 506 SVCVLDLR 513
>RGD|1560053 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1 X-linked receptor 1"
species:10116 "Rattus norvegicus" [GO:0000118 "histone deacetylase
complex" evidence=IEA;ISO] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003714 "transcription corepressor
activity" evidence=IEA;ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005876
"spindle microtubule" evidence=IEA;ISO] [GO:0008013 "beta-catenin
binding" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0017053 "transcriptional repressor complex"
evidence=IEA;ISO] [GO:0042393 "histone binding" evidence=IEA;ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA;ISO] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0047485
"protein N-terminus binding" evidence=IEA;ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 RGD:1560053 GO:GO:0017053 GO:GO:0003714
GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513
GO:GO:0060070 GO:GO:0005876 EMBL:CH473961 GO:GO:0000118
GeneTree:ENSGT00690000102024 KO:K04508 CTD:79718 OrthoDB:EOG412M5M
IPI:IPI00367976 RefSeq:NP_001102411.1 UniGene:Rn.140831
Ensembl:ENSRNOT00000015573 GeneID:365755 KEGG:rno:365755
UCSC:RGD:1560053 NextBio:687981 Uniprot:D3ZNF4
Length = 514
Score = 294 (108.6 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 64/226 (28%), Positives = 117/226 (51%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L TL H + ++K++ G ++ S+ DK IW A+ G+ ++ H DV W
Sbjct: 258 LASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ 317
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
S++ S S D + + +L + +KT +GH+N V ++P NL+ S S D +++IW
Sbjct: 318 SNNTF-ASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIW 376
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGS---------LIVSSSYDGLCRIWDTASGQCLK 189
++ C+ L AH+ + + ++ G ++ S+S+D R+WD G C+
Sbjct: 377 SMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIH 436
Query: 190 TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICS 235
TL P S V FSP+G+Y+ + + D + +W+++ T A++ S
Sbjct: 437 TLTKHQEPVYS-VAFSPDGRYLASGSFDKCVHIWNTQ--TGALVHS 479
Score = 225 (84.3 bits), Expect = 6.6e-18, P = 6.6e-18
Identities = 51/166 (30%), Positives = 82/166 (49%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS--- 78
T GHT V+++K+ P G LAS S D +KIW + H I + WS
Sbjct: 344 TFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTG 403
Query: 79 ------SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 132
+ + +L S S D T+++W++ G C+ TL H V+ F+P + SGSFD
Sbjct: 404 PGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFD 463
Query: 133 ESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LC 177
+ V IW+ +TG + + + + V +N G + +S+ DG +C
Sbjct: 464 KCVHIWNTQTGALVHSYRG-TGGIFEVCWNAAGDKVGASASDGSVC 508
Score = 217 (81.4 bits), Expect = 4.9e-17, P = 4.9e-17
Identities = 61/218 (27%), Positives = 94/218 (43%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE---KTISGHKL--GISDVA- 76
L GH V ++P + LAS S D +IW + + + H + G DV
Sbjct: 165 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGPTQLVLRHCIREGGQDVPS 224
Query: 77 --------WSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVS 128
W+S+ LL +GS D +IW G TL H +F +N + N I+S
Sbjct: 225 NKDVTSLDWNSEGTLLATGSYDGFARIWT-KDGNLASTLGQHKGPIFALKWNKKGNFILS 283
Query: 129 GSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCL 188
D++ IWD TG+ + P HS P V + + + S S D + + +
Sbjct: 284 AGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTF-ASCSTDMCIHVCKLGQDRPI 342
Query: 189 KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSK 226
KT N V+ +K+ P G + + + D TLK+W K
Sbjct: 343 KTFQGHTNE-VNAIKWDPTGNLLASCSDDMTLKIWSMK 379
Score = 148 (57.2 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 38/128 (29%), Positives = 63/128 (49%)
Query: 23 LAGHTKAVSSVKFSPNGE---------WLASSSADKLIKIWGAYDGKFEKTISGHKLGIS 73
L H K + ++K+SP G LAS+S D +++W G T++ H+ +
Sbjct: 387 LQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVY 446
Query: 74 DVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 133
VA+S D R L SGS DK + IW +G + + +G C +N + + + + D
Sbjct: 447 SVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRGTGGIFEVC-WNAAGDKVGASASDG 505
Query: 134 SVRIWDVR 141
SV + D+R
Sbjct: 506 SVCVLDLR 513
>TAIR|locus:2060560 [details] [associations]
symbol:LIS "AT2G41500" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS;RCA] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0016607 "nuclear speck" evidence=IDA] [GO:0007267
"cell-cell signaling" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000741 "karyogamy" evidence=RCA] [GO:0006312
"mitotic recombination" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0009909 "regulation of flower development" evidence=RCA]
[GO:0009933 "meristem structural organization" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010182
"sugar mediated signaling pathway" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010388 "cullin deneddylation" evidence=RCA]
[GO:0016567 "protein ubiquitination" evidence=RCA] [GO:0016571
"histone methylation" evidence=RCA] [GO:0016579 "protein
deubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007267 GO:GO:0005681
EMBL:AC002510 GO:GO:0000398 GO:GO:0001709 EMBL:AC004625
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 EMBL:BT008700 EMBL:BT020589 EMBL:AK229530
IPI:IPI00545392 PIR:T00806 RefSeq:NP_181681.1 UniGene:At.12395
UniGene:At.42825 ProteinModelPortal:O22212 SMR:O22212 STRING:O22212
PaxDb:O22212 PRIDE:O22212 EnsemblPlants:AT2G41500.1 GeneID:818748
KEGG:ath:AT2G41500 GeneFarm:4669 TAIR:At2g41500
HOGENOM:HOG000157615 InParanoid:O22212 KO:K12662 OMA:CIATVSH
PhylomeDB:O22212 ProtClustDB:CLSN2683778 Genevestigator:O22212
GermOnline:AT2G41500 GO:GO:0009560 Uniprot:O22212
Length = 554
Score = 295 (108.9 bits), Expect = 1.9e-25, P = 1.9e-25
Identities = 68/205 (33%), Positives = 105/205 (51%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
L H + + V FSP + LA++SAD+ K+W DG +T GH ++ VA+ +
Sbjct: 294 LKDHKERATDVVFSPVDDCLATASADRTAKLWKT-DGTLLQTFEGHLDRLARVAFHPSGK 352
Query: 83 LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 142
L + S DKT ++W++++G L +GHS V+ F L S D R+WD+RT
Sbjct: 353 YLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRT 412
Query: 143 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 202
G+ + H PV +V+F+ +G + S D CRIWD + L + N VS V
Sbjct: 413 GRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANL-VSQV 471
Query: 203 KFSPNGKYILA-ATLDNTLKLWDSK 226
K+ P Y LA A+ D + +W +
Sbjct: 472 KYEPQEGYFLATASYDMKVNIWSGR 496
Score = 292 (107.8 bits), Expect = 4.0e-25, P = 4.0e-25
Identities = 62/205 (30%), Positives = 103/205 (50%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
T GH ++ V F P+G++L ++S DK ++W G GH + +A+ D
Sbjct: 334 TFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDG 393
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
L S D ++W+L +G+ + +GH VF NF+P + SG D RIWD+R
Sbjct: 394 ALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLR 453
Query: 142 TGKCLKTLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 200
K L +PAH++ VS V + ++G + ++SYD IW +K+L ++ V+
Sbjct: 454 MRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDFSLVKSLAGHESK-VA 512
Query: 201 FVKFSPNGKYILAATLDNTLKLWDS 225
+ + + I + D T+KLW S
Sbjct: 513 SLDITADSSCIATVSHDRTIKLWTS 537
Score = 279 (103.3 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 66/219 (30%), Positives = 110/219 (50%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS---GHKLGISDVAWSSDS 81
G + ++ FS +G+ LA+ S + K+W + TI+ HK +DV +S
Sbjct: 253 GDDRPLTGCSFSRDGKILATCSLSGVTKLWEM--PQVTNTIAVLKDHKERATDVVFSPVD 310
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
L + S D+T K+W+ + G L+T +GH + + F+P + + S+D++ R+WD+
Sbjct: 311 DCLATASADRTAKLWK-TDGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDIN 369
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 201
TG L HS V + F +DG+L S D L R+WD +G+ + + PV
Sbjct: 370 TGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSI-LVFQGHIKPVFS 428
Query: 202 VKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTPLNL 240
V FSPNG ++ + DN ++WD ++ I NL
Sbjct: 429 VNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANL 467
Score = 224 (83.9 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 48/162 (29%), Positives = 78/162 (48%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLL 84
GH+++V + F +G AS D L ++W G+ GH + V +S + L
Sbjct: 379 GHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHL 438
Query: 85 VSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVRTG 143
SG +D +IW+L K L + H+N V + PQ + + S+D V IW R
Sbjct: 439 ASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDF 498
Query: 144 KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 185
+K+L H V+++ D S I + S+D ++W T+SG
Sbjct: 499 SLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLW-TSSG 539
Score = 135 (52.6 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 27/82 (32%), Positives = 48/82 (58%)
Query: 21 FTLAGHTKAVSSVKFSPN-GEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 79
+ + H VS VK+ P G +LA++S D + IW D K+++GH+ ++ + ++
Sbjct: 459 YIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITA 518
Query: 80 DSRLLVSGSDDKTLKIWELSSG 101
DS + + S D+T+K+W SSG
Sbjct: 519 DSSCIATVSHDRTIKLWT-SSG 539
>POMBASE|SPBC1289.11 [details] [associations]
symbol:spf38 "splicing factor Spf38" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IC] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC1289.11
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0045292 PIR:T39362 RefSeq:NP_596835.1
ProteinModelPortal:O94620 IntAct:O94620 STRING:O94620
EnsemblFungi:SPBC1289.11.1 GeneID:2539984 KEGG:spo:SPBC1289.11
HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE OrthoDB:EOG43BQZ4
NextBio:20801127 Uniprot:O94620
Length = 340
Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 63/204 (30%), Positives = 108/204 (52%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY-DGKFEKTISGHKLGISDVAWSSDSRL 83
GHT V +F P+G + AS D+ I +W + D K ++G K I+D+ WS DSR+
Sbjct: 48 GHTAEVLVARFDPSGSYFASGGMDRQILLWNVFGDVKNYGVLNGCKGAITDLQWSRDSRV 107
Query: 84 LVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCN-FNPQSNLIVSGSFDESVRIWDVRT 142
+ S D L W+ SG+ ++ KGH+ V + S L+ S S D ++++WD R+
Sbjct: 108 VYCSSSDTHLMSWDAVSGQKIRKHKGHAGVVNALDVLKVGSELLTSVSDDCTMKVWDSRS 167
Query: 143 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 202
C+KT+ P++AV + G+ + DG +IWD + C L ++ +
Sbjct: 168 KDCIKTIE-EKYPLTAVAIAQQGTQVFIGGIDGAIKIWDLRNNHCSHVL-KGHKDIITSL 225
Query: 203 KFSPNGKYILAATLDNTLKLWDSK 226
S +G +L+ ++DNT++++D K
Sbjct: 226 AISKDGSSLLSNSMDNTVRIFDVK 249
Score = 216 (81.1 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 59/213 (27%), Positives = 103/213 (48%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK--LGISDVAWSSD 80
L G A++ +++S + + SS+D + W A G+ + GH + DV
Sbjct: 89 LNGCKGAITDLQWSRDSRVVYCSSSDTHLMSWDAVSGQKIRKHKGHAGVVNALDVL-KVG 147
Query: 81 SRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNY-VFCCNFNPQSNLIVSGSFDESVRIWD 139
S LL S SDD T+K+W+ S C+KT++ Y + Q + G D +++IWD
Sbjct: 148 SELLTSVSDDCTMKVWDSRSKDCIKTIE--EKYPLTAVAIAQQGTQVFIGGIDGAIKIWD 205
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT---ASGQ----CLKTLI 192
+R C L H D ++++ ++DGS ++S+S D RI+D AS Q + I
Sbjct: 206 LRNNHCSHVLKGHKDIITSLAISKDGSSLLSNSMDNTVRIFDVKPFASAQRQLQIFEGAI 265
Query: 193 DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225
+ V +S N +++ A + D + +W +
Sbjct: 266 HGQEHNLLGVAWSRNSRFVGAGSSDKNVYVWSA 298
Score = 169 (64.5 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 54/207 (26%), Positives = 94/207 (45%)
Query: 25 GHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRL 83
GH V+++ G E L S S D +K+W + KTI K ++ VA +
Sbjct: 133 GHAGVVNALDVLKVGSELLTSVSDDCTMKVWDSRSKDCIKTIE-EKYPLTAVAIAQQGTQ 191
Query: 84 LVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT- 142
+ G D +KIW+L + C LKGH + + + + ++S S D +VRI+DV+
Sbjct: 192 VFIGGIDGAIKIWDLRNNHCSHVLKGHKDIITSLAISKDGSSLLSNSMDNTVRIFDVKPF 251
Query: 143 GKCLKTLPAHSDPVSA-------VHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD 195
+ L + V ++R+ + + S D +W +A+G L+ ++
Sbjct: 252 ASAQRQLQIFEGAIHGQEHNLLGVAWSRNSRFVGAGSSDKNVYVW-SATGD-LRYVLPGH 309
Query: 196 NPPVSFVKFSPNGKYILAATLDNTLKL 222
V+ V F P+ IL+ + D T+ L
Sbjct: 310 EGSVNHVDFHPHQDIILSCSSDRTIFL 336
Score = 145 (56.1 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 37/121 (30%), Positives = 61/121 (50%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK--------FEKTISGHKLGISD 74
L GH ++S+ S +G L S+S D ++I+ FE I G + +
Sbjct: 215 LKGHKDIITSLAISKDGSSLLSNSMDNTVRIFDVKPFASAQRQLQIFEGAIHGQEHNLLG 274
Query: 75 VAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 134
VAWS +SR + +GS DK + +W ++G L GH V +F+P ++I+S S D +
Sbjct: 275 VAWSRNSRFVGAGSSDKNVYVWS-ATGDLRYVLPGHEGSVNHVDFHPHQDIILSCSSDRT 333
Query: 135 V 135
+
Sbjct: 334 I 334
>ZFIN|ZDB-GENE-040426-2903 [details] [associations]
symbol:fbxw11b "F-box and WD-40 domain protein
11b" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-040426-2903 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:BX465186
EMBL:BC056809 IPI:IPI00494842 RefSeq:NP_998669.2 UniGene:Dr.75211
SMR:Q6PGW4 STRING:Q6PGW4 Ensembl:ENSDART00000019252 GeneID:406825
KEGG:dre:406825 CTD:406825 InParanoid:Q6PGW4 NextBio:20818332
Uniprot:Q6PGW4
Length = 527
Score = 291 (107.5 bits), Expect = 4.3e-25, P = 4.3e-25
Identities = 68/215 (31%), Positives = 116/215 (53%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW---GAYDGKFEKTISGHKLGISDVAWS 78
TL H +AV ++F NG + + S D+ I +W D + + GH+ ++ V +
Sbjct: 300 TLIHHNEAVLHLRFC-NG-LMVTCSKDRSIAVWDMASPTDISLRRVLVGHRAAVNVVDF- 356
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
D + +VS S D+T+K+W S+ + ++TL GH + C + + L+VSGS D ++R+W
Sbjct: 357 -DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLW 413
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT---------ASGQCLK 189
D+ G CL+ L H + V + F D IVS +YDG ++WD AS CL+
Sbjct: 414 DIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLR 471
Query: 190 TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
TL++ V ++F I++++ D+T+ +WD
Sbjct: 472 TLVEHSGR-VFRLQFDEF--QIISSSHDDTILIWD 503
Score = 289 (106.8 bits), Expect = 7.1e-25, P = 7.1e-25
Identities = 63/172 (36%), Positives = 100/172 (58%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L+ L GH AV+ V F + +++ S+S D+ IK+W +F +T++GHK GI+ + +
Sbjct: 340 LRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR 397
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
RL+VSGS D T+++W++ G CL+ L+GH V C F+ + IVSG++D +++W
Sbjct: 398 D--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVW 453
Query: 139 DVRTGK---------CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181
D++ CL+TL HS V + F D I+SSS+D IWD
Sbjct: 454 DLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIWD 503
Score = 224 (83.9 bits), Expect = 9.0e-18, P = 9.0e-18
Identities = 57/218 (26%), Positives = 111/218 (50%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
L GHT +V +++ + + S+D +++W G+ T+ H + + + +
Sbjct: 261 LTGHTGSVLCLQYDERV--IVTGSSDSTVRVWDVNSGEVLNTLIHHNEAVLHLRFCNG-- 316
Query: 83 LLVSGSDDKTLKIWELSSGKCL---KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
L+V+ S D+++ +W+++S + + L GH V +F+ + IVS S D ++++W
Sbjct: 317 LMVTCSKDRSIAVWDMASPTDISLRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIKVWS 374
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
T + ++TL H ++ + + RD L+VS S D R+WD G CL+ L + V
Sbjct: 375 TSTCEFVRTLNGHKRGIACLQY-RD-RLVVSGSSDNTIRLWDIECGACLRVL-EGHEELV 431
Query: 200 SFVKFSPNGKYILAATLDNTLKLWDSKV-VTPAIICST 236
++F + K I++ D +K+WD + + P ST
Sbjct: 432 RCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPAST 467
Score = 222 (83.2 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 58/202 (28%), Positives = 111/202 (54%)
Query: 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV 85
++K V +++ + E + S D IKIW + K ++GH G S + D R++V
Sbjct: 224 NSKGVYCLQY--DDEKIISGLRDNSIKIWDKQTLECLKILTGHT-G-SVLCLQYDERVIV 279
Query: 86 SGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 145
+GS D T+++W+++SG+ L TL H+ V F + L+V+ S D S+ +WD+ +
Sbjct: 280 TGSSDSTVRVWDVNSGEVLNTLIHHNEAVLHLRFC--NGLMVTCSKDRSIAVWDMASPTD 337
Query: 146 L---KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 202
+ + L H V+ V F D IVS+S D ++W T++ + ++TL + ++ +
Sbjct: 338 ISLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTL-NGHKRGIACL 394
Query: 203 KFSPNGKYILAATLDNTLKLWD 224
++ + +++ + DNT++LWD
Sbjct: 395 QY--RDRLVVSGSSDNTIRLWD 414
>UNIPROTKB|Q2TBS9 [details] [associations]
symbol:SMU1 "WD40 repeat-containing protein SMU1"
species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
GeneTree:ENSGT00700000104461 EMBL:BC109712 IPI:IPI00726295
RefSeq:NP_001033662.1 UniGene:Bt.25206 ProteinModelPortal:Q2TBS9
SMR:Q2TBS9 STRING:Q2TBS9 PRIDE:Q2TBS9 Ensembl:ENSBTAT00000020865
GeneID:540842 KEGG:bta:540842 CTD:55234 HOGENOM:HOG000264846
HOVERGEN:HBG079573 InParanoid:Q2TBS9 KO:K13111 OMA:NGHWDTV
OrthoDB:EOG49ZXP0 NextBio:20878868 Uniprot:Q2TBS9
Length = 513
Score = 290 (107.1 bits), Expect = 4.9e-25, P = 4.9e-25
Identities = 58/175 (33%), Positives = 100/175 (57%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS----GHKLGISD----VA 76
G V +FSP+G++L + S D I++W GK K + + + + D +
Sbjct: 212 GQKSHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMC 271
Query: 77 WSSDSRLLVSGSDDKTLKIWELSSGKCLKTL-KGHSNYVFCCNFNPQSNLIVSGSFDESV 135
+S D+ +L +G+ D +K+W++ SG+CL+ + HS V C +F+ S+ I+S SFD+++
Sbjct: 272 FSRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTI 331
Query: 136 RIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 190
RI +++GK LK HS V+ F +DG I+S+S DG +IW+ + +C T
Sbjct: 332 RIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKTTECSNT 386
Score = 239 (89.2 bits), Expect = 2.0e-19, P = 2.0e-19
Identities = 53/169 (31%), Positives = 95/169 (56%)
Query: 67 GHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLK--GHSNY------VFCCN 118
G K + +S D + LV+GS D +++W ++GK K LK N+ V C
Sbjct: 212 GQKSHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMC 271
Query: 119 FNPQSNLIVSGSFDESVRIWDVRTGKCLKTLP-AHSDPVSAVHFNRDGSLIVSSSYDGLC 177
F+ + ++ +G+ D +++W +++G+CL+ AHS V+ + F++D S I+S+S+D
Sbjct: 272 FSRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTI 331
Query: 178 RIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSK 226
RI SG+ LK + V+ F+ +G YI++A+ D T+K+W+ K
Sbjct: 332 RIHGLKSGKTLKEFRGHSSF-VNEATFTQDGHYIISASSDGTVKIWNMK 379
Score = 156 (60.0 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 53/211 (25%), Positives = 96/211 (45%)
Query: 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV 85
H+K V+ + FS + + S+S D+ I+I G GK K GH +++ ++ D ++
Sbjct: 306 HSKGVTCLSFSKDSSQILSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYII 365
Query: 86 SGSDDKTLKIWELSSGKCLKTLK--GHS-------NYVFCCNFNPQSNLIVSGSFDESVR 136
S S D T+KIW + + +C T K G + N V NP+ ++ + S +V
Sbjct: 366 SASSDGTVKIWNMKTTECSNTFKSLGSTAGTDITVNSVILLPKNPEHFVVCNRS--NTVV 423
Query: 137 IWDVRTGKCLKTLPAHS----DPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLI 192
I +++ G+ +++ + D V R G I D + + T +G+ +TL
Sbjct: 424 IMNMQ-GQIVRSFSSGKREGGDFVCCALSPR-GEWIYCVGEDFVLYCFSTVTGKLERTLT 481
Query: 193 DDDNPPVSFVKFSPNGKYILAATLDNTLKLW 223
+ + + P+ I + D LKLW
Sbjct: 482 VHEKDVIG-IAHHPHQNLIATYSEDGLLKLW 511
>UNIPROTKB|Q2TAY7 [details] [associations]
symbol:SMU1 "WD40 repeat-containing protein SMU1"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL162590 PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
CTD:55234 HOGENOM:HOG000264846 HOVERGEN:HBG079573 KO:K13111
OMA:NGHWDTV OrthoDB:EOG49ZXP0 EMBL:AK001667 EMBL:AK022032
EMBL:BC002876 EMBL:BC110654 IPI:IPI00305833 RefSeq:NP_060695.2
UniGene:Hs.655351 ProteinModelPortal:Q2TAY7 SMR:Q2TAY7
IntAct:Q2TAY7 MINT:MINT-256588 STRING:Q2TAY7 PhosphoSite:Q2TAY7
DMDM:109939732 PaxDb:Q2TAY7 PeptideAtlas:Q2TAY7 PRIDE:Q2TAY7
DNASU:55234 Ensembl:ENST00000397149 GeneID:55234 KEGG:hsa:55234
UCSC:uc003zsf.1 GeneCards:GC09M033041 HGNC:HGNC:18247 HPA:HPA019228
HPA:HPA019708 neXtProt:NX_Q2TAY7 PharmGKB:PA134903890
PhylomeDB:Q2TAY7 ChiTaRS:SMU1 GenomeRNAi:55234 NextBio:59249
ArrayExpress:Q2TAY7 Bgee:Q2TAY7 CleanEx:HS_SMU1
Genevestigator:Q2TAY7 GermOnline:ENSG00000122692 Uniprot:Q2TAY7
Length = 513
Score = 290 (107.1 bits), Expect = 4.9e-25, P = 4.9e-25
Identities = 58/175 (33%), Positives = 100/175 (57%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS----GHKLGISD----VA 76
G V +FSP+G++L + S D I++W GK K + + + + D +
Sbjct: 212 GQKSHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMC 271
Query: 77 WSSDSRLLVSGSDDKTLKIWELSSGKCLKTL-KGHSNYVFCCNFNPQSNLIVSGSFDESV 135
+S D+ +L +G+ D +K+W++ SG+CL+ + HS V C +F+ S+ I+S SFD+++
Sbjct: 272 FSRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTI 331
Query: 136 RIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 190
RI +++GK LK HS V+ F +DG I+S+S DG +IW+ + +C T
Sbjct: 332 RIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKTTECSNT 386
Score = 239 (89.2 bits), Expect = 2.0e-19, P = 2.0e-19
Identities = 53/169 (31%), Positives = 95/169 (56%)
Query: 67 GHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLK--GHSNY------VFCCN 118
G K + +S D + LV+GS D +++W ++GK K LK N+ V C
Sbjct: 212 GQKSHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMC 271
Query: 119 FNPQSNLIVSGSFDESVRIWDVRTGKCLKTLP-AHSDPVSAVHFNRDGSLIVSSSYDGLC 177
F+ + ++ +G+ D +++W +++G+CL+ AHS V+ + F++D S I+S+S+D
Sbjct: 272 FSRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTI 331
Query: 178 RIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSK 226
RI SG+ LK + V+ F+ +G YI++A+ D T+K+W+ K
Sbjct: 332 RIHGLKSGKTLKEFRGHSSF-VNEATFTQDGHYIISASSDGTVKIWNMK 379
Score = 156 (60.0 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 53/211 (25%), Positives = 96/211 (45%)
Query: 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV 85
H+K V+ + FS + + S+S D+ I+I G GK K GH +++ ++ D ++
Sbjct: 306 HSKGVTCLSFSKDSSQILSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYII 365
Query: 86 SGSDDKTLKIWELSSGKCLKTLK--GHS-------NYVFCCNFNPQSNLIVSGSFDESVR 136
S S D T+KIW + + +C T K G + N V NP+ ++ + S +V
Sbjct: 366 SASSDGTVKIWNMKTTECSNTFKSLGSTAGTDITVNSVILLPKNPEHFVVCNRS--NTVV 423
Query: 137 IWDVRTGKCLKTLPAHS----DPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLI 192
I +++ G+ +++ + D V R G I D + + T +G+ +TL
Sbjct: 424 IMNMQ-GQIVRSFSSGKREGGDFVCCALSPR-GEWIYCVGEDFVLYCFSTVTGKLERTLT 481
Query: 193 DDDNPPVSFVKFSPNGKYILAATLDNTLKLW 223
+ + + P+ I + D LKLW
Sbjct: 482 VHEKDVIG-IAHHPHQNLIATYSEDGLLKLW 511
>MGI|MGI:1915546 [details] [associations]
symbol:Smu1 "smu-1 suppressor of mec-8 and unc-52 homolog
(C. elegans)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
MGI:MGI:1915546 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 GeneTree:ENSGT00700000104461
CTD:55234 HOGENOM:HOG000264846 HOVERGEN:HBG079573 KO:K13111
OMA:NGHWDTV OrthoDB:EOG49ZXP0 EMBL:AB044414 EMBL:AK003493
EMBL:AK011140 EMBL:AK145982 EMBL:AK159635 EMBL:AK168813
EMBL:BC057446 IPI:IPI00331342 IPI:IPI00760034 RefSeq:NP_067510.3
UniGene:Mm.289929 ProteinModelPortal:Q3UKJ7 SMR:Q3UKJ7
STRING:Q3UKJ7 PhosphoSite:Q3UKJ7 PaxDb:Q3UKJ7 PRIDE:Q3UKJ7
Ensembl:ENSMUST00000030117 GeneID:74255 KEGG:mmu:74255
UCSC:uc008shv.2 InParanoid:Q3UKJ7 NextBio:340258 Bgee:Q3UKJ7
Genevestigator:Q3UKJ7 GermOnline:ENSMUSG00000028409 Uniprot:Q3UKJ7
Length = 513
Score = 290 (107.1 bits), Expect = 4.9e-25, P = 4.9e-25
Identities = 58/175 (33%), Positives = 100/175 (57%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS----GHKLGISD----VA 76
G V +FSP+G++L + S D I++W GK K + + + + D +
Sbjct: 212 GQKSHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMC 271
Query: 77 WSSDSRLLVSGSDDKTLKIWELSSGKCLKTL-KGHSNYVFCCNFNPQSNLIVSGSFDESV 135
+S D+ +L +G+ D +K+W++ SG+CL+ + HS V C +F+ S+ I+S SFD+++
Sbjct: 272 FSRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTI 331
Query: 136 RIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 190
RI +++GK LK HS V+ F +DG I+S+S DG +IW+ + +C T
Sbjct: 332 RIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKTTECSNT 386
Score = 239 (89.2 bits), Expect = 2.0e-19, P = 2.0e-19
Identities = 53/169 (31%), Positives = 95/169 (56%)
Query: 67 GHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLK--GHSNY------VFCCN 118
G K + +S D + LV+GS D +++W ++GK K LK N+ V C
Sbjct: 212 GQKSHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMC 271
Query: 119 FNPQSNLIVSGSFDESVRIWDVRTGKCLKTLP-AHSDPVSAVHFNRDGSLIVSSSYDGLC 177
F+ + ++ +G+ D +++W +++G+CL+ AHS V+ + F++D S I+S+S+D
Sbjct: 272 FSRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTI 331
Query: 178 RIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSK 226
RI SG+ LK + V+ F+ +G YI++A+ D T+K+W+ K
Sbjct: 332 RIHGLKSGKTLKEFRGHSSF-VNEATFTQDGHYIISASSDGTVKIWNMK 379
Score = 156 (60.0 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 53/211 (25%), Positives = 96/211 (45%)
Query: 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV 85
H+K V+ + FS + + S+S D+ I+I G GK K GH +++ ++ D ++
Sbjct: 306 HSKGVTCLSFSKDSSQILSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYII 365
Query: 86 SGSDDKTLKIWELSSGKCLKTLK--GHS-------NYVFCCNFNPQSNLIVSGSFDESVR 136
S S D T+KIW + + +C T K G + N V NP+ ++ + S +V
Sbjct: 366 SASSDGTVKIWNMKTTECSNTFKSLGSTAGTDITVNSVILLPKNPEHFVVCNRS--NTVV 423
Query: 137 IWDVRTGKCLKTLPAHS----DPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLI 192
I +++ G+ +++ + D V R G I D + + T +G+ +TL
Sbjct: 424 IMNMQ-GQIVRSFSSGKREGGDFVCCALSPR-GEWIYCVGEDFVLYCFSTVTGKLERTLT 481
Query: 193 DDDNPPVSFVKFSPNGKYILAATLDNTLKLW 223
+ + + P+ I + D LKLW
Sbjct: 482 VHEKDVIG-IAHHPHQNLIATYSEDGLLKLW 511
>RGD|620694 [details] [associations]
symbol:Smu1 "smu-1 suppressor of mec-8 and unc-52 homolog (C.
elegans)" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620694
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 CTD:55234 HOGENOM:HOG000264846
HOVERGEN:HBG079573 KO:K13111 OrthoDB:EOG49ZXP0 EMBL:AY029526
IPI:IPI00197468 RefSeq:NP_476543.1 UniGene:Rn.54978
ProteinModelPortal:Q99M63 STRING:Q99M63 PRIDE:Q99M63 GeneID:117541
KEGG:rno:117541 UCSC:RGD:620694 InParanoid:Q99M63 NextBio:620357
Genevestigator:Q99M63 GermOnline:ENSRNOG00000007671 Uniprot:Q99M63
Length = 513
Score = 290 (107.1 bits), Expect = 4.9e-25, P = 4.9e-25
Identities = 58/175 (33%), Positives = 100/175 (57%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS----GHKLGISD----VA 76
G V +FSP+G++L + S D I++W GK K + + + + D +
Sbjct: 212 GQKSHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMC 271
Query: 77 WSSDSRLLVSGSDDKTLKIWELSSGKCLKTL-KGHSNYVFCCNFNPQSNLIVSGSFDESV 135
+S D+ +L +G+ D +K+W++ SG+CL+ + HS V C +F+ S+ I+S SFD+++
Sbjct: 272 FSRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTI 331
Query: 136 RIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 190
RI +++GK LK HS V+ F +DG I+S+S DG +IW+ + +C T
Sbjct: 332 RIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKTTECSNT 386
Score = 239 (89.2 bits), Expect = 2.0e-19, P = 2.0e-19
Identities = 53/169 (31%), Positives = 95/169 (56%)
Query: 67 GHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLK--GHSNY------VFCCN 118
G K + +S D + LV+GS D +++W ++GK K LK N+ V C
Sbjct: 212 GQKSHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMC 271
Query: 119 FNPQSNLIVSGSFDESVRIWDVRTGKCLKTLP-AHSDPVSAVHFNRDGSLIVSSSYDGLC 177
F+ + ++ +G+ D +++W +++G+CL+ AHS V+ + F++D S I+S+S+D
Sbjct: 272 FSRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTI 331
Query: 178 RIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSK 226
RI SG+ LK + V+ F+ +G YI++A+ D T+K+W+ K
Sbjct: 332 RIHGLKSGKTLKEFRGHSSF-VNEATFTQDGHYIISASSDGTVKIWNMK 379
Score = 156 (60.0 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 53/211 (25%), Positives = 96/211 (45%)
Query: 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV 85
H+K V+ + FS + + S+S D+ I+I G GK K GH +++ ++ D ++
Sbjct: 306 HSKGVTCLSFSKDSSQILSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYII 365
Query: 86 SGSDDKTLKIWELSSGKCLKTLK--GHS-------NYVFCCNFNPQSNLIVSGSFDESVR 136
S S D T+KIW + + +C T K G + N V NP+ ++ + S +V
Sbjct: 366 SASSDGTVKIWNMKTTECSNTFKSLGSTAGTDITVNSVILLPKNPEHFVVCNRS--NTVV 423
Query: 137 IWDVRTGKCLKTLPAHS----DPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLI 192
I +++ G+ +++ + D V R G I D + + T +G+ +TL
Sbjct: 424 IMNMQ-GQIVRSFSSGKREGGDFVCCALSPR-GEWIYCVGEDFVLYCFSTVTGKLERTLT 481
Query: 193 DDDNPPVSFVKFSPNGKYILAATLDNTLKLW 223
+ + + P+ I + D LKLW
Sbjct: 482 VHEKDVIG-IAHHPHQNLIATYSEDGLLKLW 511
>UNIPROTKB|Q5ZME8 [details] [associations]
symbol:SMU1 "WD40 repeat-containing protein SMU1"
species:9031 "Gallus gallus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
GeneTree:ENSGT00700000104461 CTD:55234 HOGENOM:HOG000264846
HOVERGEN:HBG079573 KO:K13111 OMA:NGHWDTV OrthoDB:EOG49ZXP0
EMBL:AJ719436 IPI:IPI00571757 RefSeq:NP_001007980.1
UniGene:Gga.5532 ProteinModelPortal:Q5ZME8 PRIDE:Q5ZME8
Ensembl:ENSGALT00000003135 GeneID:427377 KEGG:gga:427377
InParanoid:Q5ZME8 NextBio:20828644 Uniprot:Q5ZME8
Length = 513
Score = 290 (107.1 bits), Expect = 4.9e-25, P = 4.9e-25
Identities = 57/175 (32%), Positives = 100/175 (57%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS----GHKLGISD----VA 76
G V +FSP+G++L + S D I++W GK K + + + + D +
Sbjct: 212 GQKSHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMC 271
Query: 77 WSSDSRLLVSGSDDKTLKIWELSSGKCLKTL-KGHSNYVFCCNFNPQSNLIVSGSFDESV 135
+S D+ +L +G+ D +K+W++ SG+CL+ + HS V C +F+ S+ I+S SFD+++
Sbjct: 272 FSRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTI 331
Query: 136 RIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 190
RI +++GK LK HS V+ F +DG I+S+S DG ++W+ + +C T
Sbjct: 332 RIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKVWNVKTTECSNT 386
Score = 237 (88.5 bits), Expect = 3.2e-19, P = 3.2e-19
Identities = 53/169 (31%), Positives = 95/169 (56%)
Query: 67 GHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLK--GHSNY------VFCCN 118
G K + +S D + LV+GS D +++W ++GK K LK N+ V C
Sbjct: 212 GQKSHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMC 271
Query: 119 FNPQSNLIVSGSFDESVRIWDVRTGKCLKTLP-AHSDPVSAVHFNRDGSLIVSSSYDGLC 177
F+ + ++ +G+ D +++W +++G+CL+ AHS V+ + F++D S I+S+S+D
Sbjct: 272 FSRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTI 331
Query: 178 RIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSK 226
RI SG+ LK + V+ F+ +G YI++A+ D T+K+W+ K
Sbjct: 332 RIHGLKSGKTLKEFRGHSSF-VNEATFTQDGHYIISASSDGTVKVWNVK 379
Score = 154 (59.3 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 52/211 (24%), Positives = 96/211 (45%)
Query: 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV 85
H+K V+ + FS + + S+S D+ I+I G GK K GH +++ ++ D ++
Sbjct: 306 HSKGVTCLSFSKDSSQILSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYII 365
Query: 86 SGSDDKTLKIWELSSGKCLKTLK--GHS-------NYVFCCNFNPQSNLIVSGSFDESVR 136
S S D T+K+W + + +C T K G + N V NP+ ++ + S +V
Sbjct: 366 SASSDGTVKVWNVKTTECSNTFKSLGSTAGTDITVNSVILLPKNPEHFVVCNRS--NTVV 423
Query: 137 IWDVRTGKCLKTLPAHS----DPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLI 192
I +++ G+ +++ + D V R G I D + + T +G+ +TL
Sbjct: 424 IMNMQ-GQIVRSFSSGKREGGDFVCCALSPR-GEWIYCVGEDFVLYCFSTVTGKLERTLT 481
Query: 193 DDDNPPVSFVKFSPNGKYILAATLDNTLKLW 223
+ + + P+ I + D LKLW
Sbjct: 482 VHEKDVIG-IAHHPHQNLIATYSEDGLLKLW 511
>DICTYBASE|DDB_G0287337 [details] [associations]
symbol:taf5 "TFIID subunit" species:44689
"Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005669 "transcription factor TFIID complex"
evidence=ISS] [GO:0000124 "SAGA complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0287337 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016568 GenomeReviews:CM000154_GR GO:GO:0006366
EMBL:AAFI02000100 GO:GO:0000124 GO:GO:0003743 GO:GO:0005669
KO:K03130 OMA:PNINYLA RefSeq:XP_637246.1 ProteinModelPortal:Q54KH7
STRING:Q54KH7 EnsemblProtists:DDB0231003 GeneID:8626077
KEGG:ddi:DDB_G0287337 InParanoid:Q54KH7 ProtClustDB:CLSZ2497147
Uniprot:Q54KH7
Length = 948
Score = 296 (109.3 bits), Expect = 5.2e-25, P = 5.2e-25
Identities = 62/219 (28%), Positives = 110/219 (50%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
T GH+ V FSP+ ++L S S D ++W GH + DV++S
Sbjct: 674 TFLGHSGPVYGCSFSPDSQYLLSCSEDTTARLWSMETMSNLVCYKGHNFPVWDVSFSPFG 733
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
+ S D+T ++W + L+ GH + F+P N + +GS D+S R+W+++
Sbjct: 734 FYFATASHDRTARLWTTNHISPLRIFTGHLSDCNTVRFHPNINYLATGSNDKSARLWEIQ 793
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 201
TGKC++ H P+ V F+ DG L+ ++ D +WD ++G+ +K + D V
Sbjct: 794 TGKCVRIFMGHRAPIYTVAFSPDGRLLATAGEDTSVILWDLSTGKKVKKM-DGHTKCVYS 852
Query: 202 VKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTPLNL 240
+ FS +G + + + D T++LWD K + + + P +L
Sbjct: 853 LDFSCDGSILASGSSDCTVRLWDVKKAFNSSLSTQPSSL 891
Score = 271 (100.5 bits), Expect = 2.5e-22, P = 2.5e-22
Identities = 66/221 (29%), Positives = 110/221 (49%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLL 84
GH V V FSP G + A++S D+ ++W + +GH + V + + L
Sbjct: 719 GHNFPVWDVSFSPFGFYFATASHDRTARLWTTNHISPLRIFTGHLSDCNTVRFHPNINYL 778
Query: 85 VSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK 144
+GS+DK+ ++WE+ +GKC++ GH ++ F+P L+ + D SV +WD+ TGK
Sbjct: 779 ATGSNDKSARLWEIQTGKCVRIFMGHRAPIYTVAFSPDGRLLATAGEDTSVILWDLSTGK 838
Query: 145 CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT--ASGQCLKTLIDDDNPPVSFV 202
+K + H+ V ++ F+ DGS++ S S D R+WD A L T P S +
Sbjct: 839 KVKKMDGHTKCVYSLDFSCDGSILASGSSDCTVRLWDVKKAFNSSLST------QPSSLI 892
Query: 203 KFSPNGKYILAATL--DNTLKLWDSKVVTPAI-ICSTPLNL 240
+ L + L D L+ + +K TP +C + NL
Sbjct: 893 NDESRKRKTLKSKLFSDELLETYPTKQ-TPVYNVCFSRRNL 932
Score = 223 (83.6 bits), Expect = 4.2e-19, Sum P(2) = 4.2e-19
Identities = 52/182 (28%), Positives = 94/182 (51%)
Query: 43 ASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGK 102
+SSS++KL K + +F KT GH + ++S DS+ L+S S+D T ++W + +
Sbjct: 656 SSSSSNKLQK--QQKESEF-KTFLGHSGPVYGCSFSPDSQYLLSCSEDTTARLWSMETMS 712
Query: 103 CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFN 162
L KGH+ V+ +F+P + S D + R+W L+ H + V F+
Sbjct: 713 NLVCYKGHNFPVWDVSFSPFGFYFATASHDRTARLWTTNHISPLRIFTGHLSDCNTVRFH 772
Query: 163 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 222
+ + + + S D R+W+ +G+C++ + P+ V FSP+G+ + A D ++ L
Sbjct: 773 PNINYLATGSNDKSARLWEIQTGKCVRIFMGH-RAPIYTVAFSPDGRLLATAGEDTSVIL 831
Query: 223 WD 224
WD
Sbjct: 832 WD 833
Score = 176 (67.0 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 42/141 (29%), Positives = 68/141 (48%)
Query: 84 LVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 143
L SGS + K+ + KT GHS V+ C+F+P S ++S S D + R+W + T
Sbjct: 652 LNSGSSSSSNKLQKQQKESEFKTFLGHSGPVYGCSFSPDSQYLLSCSEDTTARLWSMETM 711
Query: 144 KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK 203
L H+ PV V F+ G ++S+D R+W T L+ + + V+
Sbjct: 712 SNLVCYKGHNFPVWDVSFSPFGFYFATASHDRTARLWTTNHISPLR-IFTGHLSDCNTVR 770
Query: 204 FSPNGKYILAATLDNTLKLWD 224
F PN Y+ + D + +LW+
Sbjct: 771 FHPNINYLATGSNDKSARLWE 791
Score = 143 (55.4 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 42/153 (27%), Positives = 71/153 (46%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLL 84
GH + +V FSP+G LA++ D + +W GK K + GH + + +S D +L
Sbjct: 803 GHRAPIYTVAFSPDGRLLATAGEDTSVILWDLSTGKKVKKMDGHTKCVYSLDFSCDGSIL 862
Query: 85 VSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVRTG 143
SGS D T+++W++ F + + Q S+LI S + +
Sbjct: 863 ASGSSDCTVRLWDVKKA-------------FNSSLSTQPSSLINDESRKRKTLKSKLFSD 909
Query: 144 KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGL 176
+ L+T P PV V F+R L+ S +++ L
Sbjct: 910 ELLETYPTKQTPVYNVCFSRRNLLLASGAFNTL 942
Score = 128 (50.1 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 35/110 (31%), Positives = 52/110 (47%)
Query: 123 SNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 182
+N + SGS S ++ + KT HS PV F+ D ++S S D R+W
Sbjct: 649 NNNLNSGSSSSSNKLQKQQKESEFKTFLGHSGPVYGCSFSPDSQYLLSCSEDTTARLW-- 706
Query: 183 ASGQCLKTLI--DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTP 230
S + + L+ N PV V FSP G Y A+ D T +LW + ++P
Sbjct: 707 -SMETMSNLVCYKGHNFPVWDVSFSPFGFYFATASHDRTARLWTTNHISP 755
Score = 59 (25.8 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 64 TISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGK 102
TI G++ S D++L+ G D ++KIW L K
Sbjct: 553 TIFNTYQGLNTTDISKDAQLVAGGFSDSSVKIWNLKEMK 591
Score = 44 (20.5 bits), Expect = 4.2e-19, Sum P(2) = 4.2e-19
Identities = 8/43 (18%), Positives = 22/43 (51%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK 63
+T+ + +++ S + + +A +D +KIW + K ++
Sbjct: 552 YTIFNTYQGLNTTDISKDAQLVAGGFSDSSVKIWNLKEMKEQR 594
>UNIPROTKB|F1P0F4 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00821846
Ensembl:ENSGALT00000040449 ArrayExpress:F1P0F4 Uniprot:F1P0F4
Length = 661
Score = 293 (108.2 bits), Expect = 5.2e-25, P = 5.2e-25
Identities = 57/204 (27%), Positives = 108/204 (52%)
Query: 23 LAGHTKAVSSVKFSPN-GEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
+ H+ VSS+ + G LA+ D + +W +++GH I + S+
Sbjct: 16 IVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKE 75
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
L+V+GS ++++W+L + K L+TL GH + +F+P + + SGS D +++WDVR
Sbjct: 76 ELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVR 135
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 201
C+ +H+ V + F+ DG + S++ D ++WD +G+ + P V+
Sbjct: 136 RKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHYGP-VNV 194
Query: 202 VKFSPNGKYILAATLDN-TLKLWD 224
V+F P+ +Y+LA+ + T++ WD
Sbjct: 195 VEFHPSIEYLLASGSSSMTIRFWD 218
Score = 254 (94.5 bits), Expect = 8.5e-21, P = 8.5e-21
Identities = 53/188 (28%), Positives = 91/188 (48%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
+L GHT + S++ S E + + S I++W K +T+ GHK I + +
Sbjct: 58 SLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYG 117
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
+ SGS D +K+W++ C+ K H+ V C F+P + S + D +V++WD+
Sbjct: 118 SFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLT 177
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGS-LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 200
GK + H PV+ V F+ L+ S S R WD + + I+++ PV
Sbjct: 178 AGKVMFEFTGHYGPVNVVEFHPSIEYLLASGSSSMTIRFWDLEKFHVV-SCIEEEATPVR 236
Query: 201 FVKFSPNG 208
+ F+P+G
Sbjct: 237 CILFNPDG 244
Score = 224 (83.9 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 53/173 (30%), Positives = 84/173 (48%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY-DGKFEKTISGHKLGISDVAWSSD 80
TL GH + S+ F P G ++AS S D IK+W G K S H + + +S D
Sbjct: 100 TLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKS-HTQAVRCLRFSPD 158
Query: 81 SRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWD 139
+ L S +DD T+K+W+L++GK + GH V F+P L+ SGS ++R WD
Sbjct: 159 GKWLASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFHPSIEYLLASGSSSMTIRFWD 218
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLI 192
+ + + + PV + FN DG + D L R++ +C ++
Sbjct: 219 LEKFHVVSCIEEEATPVRCILFNPDGCCLYGGFQDSL-RVYGWEPERCFDVVV 270
Score = 185 (70.2 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 40/126 (31%), Positives = 66/126 (52%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS-S 79
F HT+AV ++FSP+G+WLAS++ D +K+W GK +GH ++ V + S
Sbjct: 141 FKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFHPS 200
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
LL SGS T++ W+L + ++ + V C FNP + G F +S+R++
Sbjct: 201 IEYLLASGSSSMTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLYGG-FQDSLRVYG 259
Query: 140 VRTGKC 145
+C
Sbjct: 260 WEPERC 265
>ASPGD|ASPL0000002074 [details] [associations]
symbol:rcoA species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0043941
"positive regulation of sexual sporulation resulting in formation
of a cellular spore" evidence=IMP] [GO:0045461 "sterigmatocystin
biosynthetic process" evidence=IMP] [GO:0016584 "nucleosome
positioning" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0080025 "phosphatidylinositol-3,5-bisphosphate
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0010914 "positive
regulation of sterigmatocystin biosynthetic process" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:0000433 "negative regulation of transcription
from RNA polymerase II promoter by glucose" evidence=IEA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043156 "chromatin
remodeling in response to cation stress" evidence=IEA] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0001198 "negative regulation
of mating-type specific transcription from RNA polymerase II
promoter" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000200558
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
ProteinModelPortal:C8V0I4 EnsemblFungi:CADANIAT00007274 OMA:SQYIVNP
Uniprot:C8V0I4
Length = 574
Score = 291 (107.5 bits), Expect = 5.8e-25, P = 5.8e-25
Identities = 66/219 (30%), Positives = 113/219 (51%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
+K +GH + + S+ F+ NG ++AS S DK +++W +GK T+S G++ VA S
Sbjct: 350 IKHIFSGHEQDIYSLDFAGNGRYIASGSGDKTVRLWDIAEGKLVYTLSIED-GVTTVAMS 408
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLK---GHSNYVFCCNFNPQSNLIVSGSFDESV 135
D + +GS DKT+++W+ ++G ++ L+ GH + V+ F P +VSGS D+++
Sbjct: 409 PDGLYVAAGSLDKTVRVWDTTTGYLVERLENPDGHKDSVYSVAFAPNGKELVSGSLDKTI 468
Query: 136 RIWDV-----------RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 184
++W++ + GKC +T H D V +V DG ++S S D + WD +
Sbjct: 469 KLWELNLPRQQYNSAGKGGKCHRTFEGHKDFVLSVCLTPDGHWVMSGSKDRGVQFWDPIT 528
Query: 185 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 223
G L N +S V SP G + D ++W
Sbjct: 529 GNAQMMLQGHKNSVIS-VAPSPTGNLFATGSGDMRARIW 566
Score = 286 (105.7 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 65/207 (31%), Positives = 112/207 (54%)
Query: 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI---SGHKLG---ISDVAWSS 79
H V V+FS +G++LA+ ++ +I+ G+ + S K G I V +S
Sbjct: 268 HDSVVCCVRFSRDGKYLATG-CNRSAQIFDVTLGQNVAVLQDESVDKSGDLYIRSVCFSP 326
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
D + L +G++DK +++W++++ GH ++ +F I SGS D++VR+WD
Sbjct: 327 DGKYLATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFAGNGRYIASGSGDKTVRLWD 386
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN--P 197
+ GK + TL D V+ V + DG + + S D R+WDT +G ++ L + D
Sbjct: 387 IAEGKLVYTLSIE-DGVTTVAMSPDGLYVAAGSLDKTVRVWDTTTGYLVERLENPDGHKD 445
Query: 198 PVSFVKFSPNGKYILAATLDNTLKLWD 224
V V F+PNGK +++ +LD T+KLW+
Sbjct: 446 SVYSVAFAPNGKELVSGSLDKTIKLWE 472
Score = 272 (100.8 bits), Expect = 6.8e-23, P = 6.8e-23
Identities = 62/209 (29%), Positives = 110/209 (52%)
Query: 30 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSD 89
+ SV FSP+G++LA+ + DK I++W + SGH+ I + ++ + R + SGS
Sbjct: 319 IRSVCFSPDGKYLATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFAGNGRYIASGSG 378
Query: 90 DKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTL 149
DKT+++W+++ GK + TL V +P + +GS D++VR+WD TG ++ L
Sbjct: 379 DKTVRLWDIAEGKLVYTLSIEDG-VTTVAMSPDGLYVAAGSLDKTVRVWDTTTGYLVERL 437
Query: 150 --P-AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT-----------ASGQCLKTLIDDD 195
P H D V +V F +G +VS S D ++W+ G+C +T +
Sbjct: 438 ENPDGHKDSVYSVAFAPNGKELVSGSLDKTIKLWELNLPRQQYNSAGKGGKCHRTF-EGH 496
Query: 196 NPPVSFVKFSPNGKYILAATLDNTLKLWD 224
V V +P+G ++++ + D ++ WD
Sbjct: 497 KDFVLSVCLTPDGHWVMSGSKDRGVQFWD 525
Score = 205 (77.2 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 46/164 (28%), Positives = 86/164 (52%)
Query: 68 HKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSN------YVFCCNFNP 121
H + V +S D + L +G + ++ +I++++ G+ + L+ S Y+ F+P
Sbjct: 268 HDSVVCCVRFSRDGKYLATGCN-RSAQIFDVTLGQNVAVLQDESVDKSGDLYIRSVCFSP 326
Query: 122 QSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181
+ +G+ D+ +R+WD+ T H + ++ F +G I S S D R+WD
Sbjct: 327 DGKYLATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFAGNGRYIASGSGDKTVRLWD 386
Query: 182 TASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225
A G+ + TL +D V+ V SP+G Y+ A +LD T+++WD+
Sbjct: 387 IAEGKLVYTLSIEDG--VTTVAMSPDGLYVAAGSLDKTVRVWDT 428
Score = 136 (52.9 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 27/79 (34%), Positives = 39/79 (49%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
T GH V SV +P+G W+ S S D+ ++ W G + + GHK + VA S
Sbjct: 492 TFEGHKDFVLSVCLTPDGHWVMSGSKDRGVQFWDPITGNAQMMLQGHKNSVISVAPSPTG 551
Query: 82 RLLVSGSDDKTLKIWELSS 100
L +GS D +IW S+
Sbjct: 552 NLFATGSGDMRARIWRYSA 570
>UNIPROTKB|Q5ZJH5 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045638 "negative regulation of myeloid
cell differentiation" evidence=ISS] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISS] [GO:2001162
"positive regulation of histone H3-K79 methylation" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0080182
"histone H3-K4 trimethylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW
EMBL:AJ720459 IPI:IPI00584957 RefSeq:NP_001005805.1
UniGene:Gga.4665 ProteinModelPortal:Q5ZJH5 GeneID:415359
KEGG:gga:415359 InParanoid:Q5ZJH5 NextBio:20818980 Uniprot:Q5ZJH5
Length = 305
Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 64/207 (30%), Positives = 111/207 (53%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L++TL GH V SV S G ASSS D I++W GK K+I + +A+S
Sbjct: 56 LQWTLEGHQLGVVSVDISHTGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVDAWSLAFS 115
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
DS+ L +GS + I+ + +GK +L ++ ++P + SG+ D + I+
Sbjct: 116 PDSQFLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIF 175
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 198
D+ TGK L TL H+ P+ ++ F+ D L+V++S DG +I+D TL +
Sbjct: 176 DIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWV 235
Query: 199 VSFVKFSPNGKYILAATLDNTLKLWDS 225
++ V F P+ + ++++ D ++K+WD+
Sbjct: 236 LN-VAFCPDDTHFVSSSSDKSVKVWDA 261
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 60/162 (37%), Positives = 90/162 (55%)
Query: 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 79
+++L K + S+ +SP+G++LAS + D +I I+ GK T+ GH + I + +S
Sbjct: 141 EYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP 200
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
DS+LLV+ SDD +KI+++ TL GH ++V F P VS S D+SV++WD
Sbjct: 201 DSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFCPDDTHFVSSSSDKSVKVWD 260
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181
T C+ T H D V V +N GS IVS D I+D
Sbjct: 261 AGTRTCVHTFFDHQDQVWGVKYNGSGSKIVSVGDDQEIHIYD 302
Score = 268 (99.4 bits), Expect = 2.9e-23, P = 2.9e-23
Identities = 63/196 (32%), Positives = 106/196 (54%)
Query: 32 SVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDK 91
S+ FSP+ ++LA+ S + I+G GK E ++ I +A+S D + L SG+ D
Sbjct: 111 SLAFSPDSQFLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDG 170
Query: 92 TLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPA 151
+ I+++++GK L TL+GH+ + F+P S L+V+ S D ++I+DV+ TL
Sbjct: 171 IINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSG 230
Query: 152 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 211
H V V F D + VSSS D ++WD + C+ T D + V VK++ +G I
Sbjct: 231 HGSWVLNVAFCPDDTHFVSSSSDKSVKVWDAGTRTCVHTFFDHQDQ-VWGVKYNGSGSKI 289
Query: 212 LAATLDNTLKLWDSKV 227
++ D + ++D V
Sbjct: 290 VSVGDDQEIHIYDCPV 305
Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 63/205 (30%), Positives = 108/205 (52%)
Query: 26 HTKAVSSV---KFSPNG-EWLASSSADKLIKIWGAYDGKFEK--TISGHKLGISDVAWSS 79
H A+ SV K NG E + S S D L+K+W D K + T+ GH+LG+ V S
Sbjct: 15 HDDAIWSVAWGKNKKNGSETVISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGVVSVDISH 74
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
+ S S D +++W+L +GK +K++ + F+P S + +GS V I+
Sbjct: 75 TGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVDAWSLAFSPDSQFLATGSHVGKVNIFG 134
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
V TGK +L + ++ ++ DG + S + DG+ I+D A+G+ L TL + P+
Sbjct: 135 VETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTL-EGHAMPI 193
Query: 200 SFVKFSPNGKYILAATLDNTLKLWD 224
+ FSP+ + ++ A+ D +K++D
Sbjct: 194 RSLTFSPDSQLLVTASDDGYIKIYD 218
Score = 192 (72.6 bits), Expect = 4.4e-15, P = 4.4e-15
Identities = 40/121 (33%), Positives = 64/121 (52%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L TL GH + S+ FSP+ + L ++S D IKI+ T+SGH + +VA+
Sbjct: 182 LLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFC 241
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
D VS S DK++K+W+ + C+ T H + V+ +N + IVS D+ + I+
Sbjct: 242 PDDTHFVSSSSDKSVKVWDAGTRTCVHTFFDHQDQVWGVKYNGSGSKIVSVGDDQEIHIY 301
Query: 139 D 139
D
Sbjct: 302 D 302
>UNIPROTKB|F1NFT8 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0016593 "Cdc73/Paf1 complex" evidence=IEA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IEA] [GO:0035327
"transcriptionally active chromatin" evidence=IEA] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=IEA] [GO:0055087
"Ski complex" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087
OMA:IATGSHH IPI:IPI00584957 EMBL:AADN02040454
ProteinModelPortal:F1NFT8 PRIDE:F1NFT8 Ensembl:ENSGALT00000034634
Uniprot:F1NFT8
Length = 305
Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 64/207 (30%), Positives = 111/207 (53%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L++TL GH V SV S G ASSS D I++W GK K+I + +A+S
Sbjct: 56 LQWTLEGHQLGVVSVDISHTGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVDAWSLAFS 115
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
DS+ L +GS + I+ + +GK +L ++ ++P + SG+ D + I+
Sbjct: 116 PDSQFLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIF 175
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 198
D+ TGK L TL H+ P+ ++ F+ D L+V++S DG +I+D TL +
Sbjct: 176 DIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWV 235
Query: 199 VSFVKFSPNGKYILAATLDNTLKLWDS 225
++ V F P+ + ++++ D ++K+WD+
Sbjct: 236 LN-VAFCPDDTHFVSSSSDKSVKVWDA 261
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 60/162 (37%), Positives = 90/162 (55%)
Query: 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 79
+++L K + S+ +SP+G++LAS + D +I I+ GK T+ GH + I + +S
Sbjct: 141 EYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP 200
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
DS+LLV+ SDD +KI+++ TL GH ++V F P VS S D+SV++WD
Sbjct: 201 DSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFCPDDTHFVSSSSDKSVKVWD 260
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181
T C+ T H D V V +N GS IVS D I+D
Sbjct: 261 AGTRTCVHTFFDHQDQVWGVKYNGSGSKIVSVGDDQEIHIYD 302
Score = 268 (99.4 bits), Expect = 2.9e-23, P = 2.9e-23
Identities = 63/196 (32%), Positives = 106/196 (54%)
Query: 32 SVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDK 91
S+ FSP+ ++LA+ S + I+G GK E ++ I +A+S D + L SG+ D
Sbjct: 111 SLAFSPDSQFLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDG 170
Query: 92 TLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPA 151
+ I+++++GK L TL+GH+ + F+P S L+V+ S D ++I+DV+ TL
Sbjct: 171 IINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSG 230
Query: 152 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 211
H V V F D + VSSS D ++WD + C+ T D + V VK++ +G I
Sbjct: 231 HGSWVLNVAFCPDDTHFVSSSSDKSVKVWDAGTRTCVHTFFDHQDQ-VWGVKYNGSGSKI 289
Query: 212 LAATLDNTLKLWDSKV 227
++ D + ++D V
Sbjct: 290 VSVGDDQEIHIYDCPV 305
Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 61/205 (29%), Positives = 107/205 (52%)
Query: 26 HTKAVSSVKFSPN----GEWLASSSADKLIKIWGAYDGKFEK--TISGHKLGISDVAWSS 79
H A+ SV + N E + S S D L+K+W D K + T+ GH+LG+ V S
Sbjct: 15 HDDAIWSVAWGKNKKDGSETVISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGVVSVDISH 74
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
+ S S D +++W+L +GK +K++ + F+P S + +GS V I+
Sbjct: 75 TGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVDAWSLAFSPDSQFLATGSHVGKVNIFG 134
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
V TGK +L + ++ ++ DG + S + DG+ I+D A+G+ L TL + P+
Sbjct: 135 VETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTL-EGHAMPI 193
Query: 200 SFVKFSPNGKYILAATLDNTLKLWD 224
+ FSP+ + ++ A+ D +K++D
Sbjct: 194 RSLTFSPDSQLLVTASDDGYIKIYD 218
Score = 192 (72.6 bits), Expect = 4.4e-15, P = 4.4e-15
Identities = 40/121 (33%), Positives = 64/121 (52%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L TL GH + S+ FSP+ + L ++S D IKI+ T+SGH + +VA+
Sbjct: 182 LLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFC 241
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
D VS S DK++K+W+ + C+ T H + V+ +N + IVS D+ + I+
Sbjct: 242 PDDTHFVSSSSDKSVKVWDAGTRTCVHTFFDHQDQVWGVKYNGSGSKIVSVGDDQEIHIY 301
Query: 139 D 139
D
Sbjct: 302 D 302
>UNIPROTKB|Q32LN7 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9913
"Bos taurus" [GO:0080182 "histone H3-K4 trimethylation"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:2001162 "positive regulation of histone H3-K79 methylation"
evidence=ISS] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=ISS] [GO:0045638 "negative regulation of
myeloid cell differentiation" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISS] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 GO:GO:0045638 GO:GO:2001162
GeneTree:ENSGT00700000104507 GO:GO:0055087 EMBL:BC109495
IPI:IPI00695868 RefSeq:NP_001033186.1 UniGene:Bt.20040
ProteinModelPortal:Q32LN7 PRIDE:Q32LN7 Ensembl:ENSBTAT00000021203
GeneID:513208 KEGG:bta:513208 CTD:80349 HOGENOM:HOG000036765
HOVERGEN:HBG059813 InParanoid:Q32LN7 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW NextBio:20870747 Uniprot:Q32LN7
Length = 305
Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 61/162 (37%), Positives = 93/162 (57%)
Query: 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 79
+++L K + S+ +SP+G++LAS + D +I I+ GK T+ GH + I + +S
Sbjct: 141 EYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP 200
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
DS+LLV+ SDD +KI+++ TL GH+++V F P VS S D+SV++WD
Sbjct: 201 DSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWD 260
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181
V T C+ T H D V V +N +GS IVS D I+D
Sbjct: 261 VGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYD 302
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 61/196 (31%), Positives = 107/196 (54%)
Query: 32 SVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDK 91
++ FSP+ ++LA+ + + I+G GK E ++ I +A+S D + L SG+ D
Sbjct: 111 TLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDG 170
Query: 92 TLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPA 151
+ I+++++GK L TL+GH+ + F+P S L+V+ S D ++I+DV+ TL
Sbjct: 171 IINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSG 230
Query: 152 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 211
H+ V V F D + VSSS D ++WD + C+ T D + V VK++ NG I
Sbjct: 231 HASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQ-VWGVKYNGNGSKI 289
Query: 212 LAATLDNTLKLWDSKV 227
++ D + ++D +
Sbjct: 290 VSVGDDQEIHIYDCPI 305
Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 62/206 (30%), Positives = 110/206 (53%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L+++L GH V SV S ASSS D I++W +GK K+I + +A+S
Sbjct: 56 LQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFS 115
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
DS+ L +G+ + I+ + SGK +L ++ ++P + SG+ D + I+
Sbjct: 116 PDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIF 175
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 198
D+ TGK L TL H+ P+ ++ F+ D L+V++S DG +I+D TL +
Sbjct: 176 DIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWV 235
Query: 199 VSFVKFSPNGKYILAATLDNTLKLWD 224
++ V F P+ + ++++ D ++K+WD
Sbjct: 236 LN-VAFCPDDTHFVSSSSDKSVKVWD 260
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 57/205 (27%), Positives = 107/205 (52%)
Query: 26 HTKAVSSVKFSPN----GEWLASSSADKLIKIWGAYDGKFEK--TISGHKLGISDVAWSS 79
H A+ SV + N E + + S D L+K+W D K + ++ GH+LG+ V S
Sbjct: 15 HDDAIWSVAWGSNKKENSETVVTGSLDDLVKVWKWRDEKLDLQWSLEGHQLGVVSVDISH 74
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
+ S S D +++W+L +GK +K++ + F+P S + +G+ V I+
Sbjct: 75 TLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFG 134
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
V +GK +L + ++ ++ DG + S + DG+ I+D A+G+ L TL + P+
Sbjct: 135 VESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTL-EGHAMPI 193
Query: 200 SFVKFSPNGKYILAATLDNTLKLWD 224
+ FSP+ + ++ A+ D +K++D
Sbjct: 194 RSLTFSPDSQLLVTASDDGYIKIYD 218
Score = 195 (73.7 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 40/121 (33%), Positives = 65/121 (53%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L TL GH + S+ FSP+ + L ++S D IKI+ T+SGH + +VA+
Sbjct: 182 LLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFC 241
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
D VS S DK++K+W++ + C+ T H + V+ +N + IVS D+ + I+
Sbjct: 242 PDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIY 301
Query: 139 D 139
D
Sbjct: 302 D 302
>MGI|MGI:1917493 [details] [associations]
symbol:Wdr61 "WD repeat domain 61" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=ISO]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISO] [GO:0035327
"transcriptionally active chromatin" evidence=ISO] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISO] [GO:0055087
"Ski complex" evidence=ISO] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISO] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1917493 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309554 EMBL:AK012342 EMBL:AK013114
EMBL:AK142498 EMBL:AK153862 EMBL:AK167706 EMBL:BC023026
IPI:IPI00112320 RefSeq:NP_001020546.1 RefSeq:NP_075680.1
UniGene:Mm.28437 ProteinModelPortal:Q9ERF3 SMR:Q9ERF3 IntAct:Q9ERF3
PhosphoSite:Q9ERF3 PaxDb:Q9ERF3 PRIDE:Q9ERF3
Ensembl:ENSMUST00000051822 Ensembl:ENSMUST00000121204 GeneID:66317
KEGG:mmu:66317 InParanoid:Q9ERF3 NextBio:321305 Bgee:Q9ERF3
CleanEx:MM_WDR61 Genevestigator:Q9ERF3
GermOnline:ENSMUSG00000061559 Uniprot:Q9ERF3
Length = 305
Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 60/162 (37%), Positives = 93/162 (57%)
Query: 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 79
+++L K + S+ +SP+G++LAS + D +I I+ GK T+ GH + I + +S
Sbjct: 141 EYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP 200
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
DS+LLV+ SDD +KI+++ TL GH+++V F P VS S D+SV++WD
Sbjct: 201 DSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWD 260
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181
V T C+ T H D V V +N +GS IVS D ++D
Sbjct: 261 VGTRTCIHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVYD 302
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 61/196 (31%), Positives = 107/196 (54%)
Query: 32 SVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDK 91
++ FSP+ ++LA+ + + I+G GK E ++ I +A+S D + L SG+ D
Sbjct: 111 TLAFSPDSQYLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDG 170
Query: 92 TLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPA 151
+ I+++++GK L TL+GH+ + F+P S L+V+ S D ++I+DV+ TL
Sbjct: 171 IINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSG 230
Query: 152 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 211
H+ V V F D + VSSS D ++WD + C+ T D + V VK++ NG I
Sbjct: 231 HASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQ-VWGVKYNGNGSKI 289
Query: 212 LAATLDNTLKLWDSKV 227
++ D + ++D +
Sbjct: 290 VSVGDDQEIHVYDCPI 305
Score = 268 (99.4 bits), Expect = 2.9e-23, P = 2.9e-23
Identities = 62/206 (30%), Positives = 110/206 (53%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L+++L GH V SV S ASSS D I++W +GK K+I + +A+S
Sbjct: 56 LQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQMKSIDAGPVDAWTLAFS 115
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
DS+ L +G+ + I+ + SGK +L ++ ++P + SG+ D + I+
Sbjct: 116 PDSQYLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIF 175
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 198
D+ TGK L TL H+ P+ ++ F+ D L+V++S DG +I+D TL +
Sbjct: 176 DIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWV 235
Query: 199 VSFVKFSPNGKYILAATLDNTLKLWD 224
++ V F P+ + ++++ D ++K+WD
Sbjct: 236 LN-VAFCPDDTHFVSSSSDKSVKVWD 260
Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 57/205 (27%), Positives = 107/205 (52%)
Query: 26 HTKAVSSVKFSPNG----EWLASSSADKLIKIWGAYDGKFEK--TISGHKLGISDVAWSS 79
H A+ SV + N E + + S D L+K+W D + E ++ GH+LG+ V S
Sbjct: 15 HDDAIWSVAWETNKKENIETVVTGSLDDLVKVWKWRDERLELQWSLEGHQLGVVSVDISH 74
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
+ S S D +++W+L +GK +K++ + F+P S + +G+ V I+
Sbjct: 75 TLPIAASSSLDAHIRLWDLENGKQMKSIDAGPVDAWTLAFSPDSQYLATGTHMGKVNIFG 134
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
V +GK +L + ++ ++ DG + S + DG+ I+D A+G+ L TL + P+
Sbjct: 135 VESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTL-EGHAMPI 193
Query: 200 SFVKFSPNGKYILAATLDNTLKLWD 224
+ FSP+ + ++ A+ D +K++D
Sbjct: 194 RSLTFSPDSQLLVTASDDGYIKIYD 218
Score = 195 (73.7 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 39/121 (32%), Positives = 65/121 (53%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L TL GH + S+ FSP+ + L ++S D IKI+ T+SGH + +VA+
Sbjct: 182 LLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFC 241
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
D VS S DK++K+W++ + C+ T H + V+ +N + IVS D+ + ++
Sbjct: 242 PDDTHFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVY 301
Query: 139 D 139
D
Sbjct: 302 D 302
>UNIPROTKB|Q9GZS3 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=IDA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0045638 "negative regulation of myeloid cell
differentiation" evidence=IDA] [GO:0055087 "Ski complex"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0035327 "transcriptionally active
chromatin" evidence=IDA] [GO:0051571 "positive regulation of
histone H3-K4 methylation" evidence=IMP] [GO:2001162 "positive
regulation of histone H3-K79 methylation" evidence=IMP] [GO:0080182
"histone H3-K4 trimethylation" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 EMBL:CH471136 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309553 EMBL:AF100786 EMBL:AF127799
EMBL:AK024754 EMBL:CR457333 EMBL:BC010080 IPI:IPI00019269
RefSeq:NP_079510.1 UniGene:Hs.513055 PDB:3OW8 PDBsum:3OW8
ProteinModelPortal:Q9GZS3 SMR:Q9GZS3 DIP:DIP-36672N IntAct:Q9GZS3
MINT:MINT-1376321 STRING:Q9GZS3 PhosphoSite:Q9GZS3 DMDM:74761365
PaxDb:Q9GZS3 PeptideAtlas:Q9GZS3 PRIDE:Q9GZS3 DNASU:80349
Ensembl:ENST00000267973 Ensembl:ENST00000558311 GeneID:80349
KEGG:hsa:80349 UCSC:uc002bdn.3 GeneCards:GC15M078575
HGNC:HGNC:30300 HPA:HPA039932 HPA:HPA040065 MIM:609540
neXtProt:NX_Q9GZS3 PharmGKB:PA142670595 InParanoid:Q9GZS3
PhylomeDB:Q9GZS3 ChiTaRS:WDR61 EvolutionaryTrace:Q9GZS3
GenomeRNAi:80349 NextBio:70956 Bgee:Q9GZS3 CleanEx:HS_WDR61
Genevestigator:Q9GZS3 GermOnline:ENSG00000140395 Uniprot:Q9GZS3
Length = 305
Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 61/162 (37%), Positives = 93/162 (57%)
Query: 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 79
+++L K + S+ +SP+G++LAS + D +I I+ GK T+ GH + I + +S
Sbjct: 141 EYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP 200
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
DS+LLV+ SDD +KI+++ TL GH+++V F P VS S D+SV++WD
Sbjct: 201 DSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWD 260
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181
V T C+ T H D V V +N +GS IVS D I+D
Sbjct: 261 VGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYD 302
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 61/196 (31%), Positives = 107/196 (54%)
Query: 32 SVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDK 91
++ FSP+ ++LA+ + + I+G GK E ++ I +A+S D + L SG+ D
Sbjct: 111 TLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDG 170
Query: 92 TLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPA 151
+ I+++++GK L TL+GH+ + F+P S L+V+ S D ++I+DV+ TL
Sbjct: 171 IINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSG 230
Query: 152 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 211
H+ V V F D + VSSS D ++WD + C+ T D + V VK++ NG I
Sbjct: 231 HASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQ-VWGVKYNGNGSKI 289
Query: 212 LAATLDNTLKLWDSKV 227
++ D + ++D +
Sbjct: 290 VSVGDDQEIHIYDCPI 305
Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 62/206 (30%), Positives = 110/206 (53%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L+++L GH V SV S ASSS D I++W +GK K+I + +A+S
Sbjct: 56 LQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFS 115
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
DS+ L +G+ + I+ + SGK +L ++ ++P + SG+ D + I+
Sbjct: 116 PDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIF 175
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 198
D+ TGK L TL H+ P+ ++ F+ D L+V++S DG +I+D TL +
Sbjct: 176 DIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWV 235
Query: 199 VSFVKFSPNGKYILAATLDNTLKLWD 224
++ V F P+ + ++++ D ++K+WD
Sbjct: 236 LN-VAFCPDDTHFVSSSSDKSVKVWD 260
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 56/205 (27%), Positives = 107/205 (52%)
Query: 26 HTKAVSSVKFSPN----GEWLASSSADKLIKIWGAYDGKFEK--TISGHKLGISDVAWSS 79
H A+ SV + N E + + S D L+K+W D + + ++ GH+LG+ V S
Sbjct: 15 HDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISH 74
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
+ S S D +++W+L +GK +K++ + F+P S + +G+ V I+
Sbjct: 75 TLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFG 134
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
V +GK +L + ++ ++ DG + S + DG+ I+D A+G+ L TL + P+
Sbjct: 135 VESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTL-EGHAMPI 193
Query: 200 SFVKFSPNGKYILAATLDNTLKLWD 224
+ FSP+ + ++ A+ D +K++D
Sbjct: 194 RSLTFSPDSQLLVTASDDGYIKIYD 218
Score = 195 (73.7 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 40/121 (33%), Positives = 65/121 (53%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L TL GH + S+ FSP+ + L ++S D IKI+ T+SGH + +VA+
Sbjct: 182 LLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFC 241
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
D VS S DK++K+W++ + C+ T H + V+ +N + IVS D+ + I+
Sbjct: 242 PDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIY 301
Query: 139 D 139
D
Sbjct: 302 D 302
>RGD|1308228 [details] [associations]
symbol:Wdr61 "WD repeat domain 61" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=ISO;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISO;ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISO;ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISO;ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISO;ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0055087 "Ski complex" evidence=ISO;ISS]
[GO:0080182 "histone H3-K4 trimethylation" evidence=ISO;ISS]
[GO:2001162 "positive regulation of histone H3-K79 methylation"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1308228 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW
EMBL:BC098059 IPI:IPI00366523 RefSeq:NP_001020914.1 UniGene:Rn.3698
ProteinModelPortal:Q4V7A0 STRING:Q4V7A0 PRIDE:Q4V7A0 GeneID:363064
KEGG:rno:363064 UCSC:RGD:1308228 InParanoid:Q4V7A0 NextBio:682300
ArrayExpress:Q4V7A0 Genevestigator:Q4V7A0
GermOnline:ENSRNOG00000012803 Uniprot:Q4V7A0
Length = 305
Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 60/162 (37%), Positives = 93/162 (57%)
Query: 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 79
+++L K + S+ +SP+G++LAS + D +I I+ GK T+ GH + I + +S
Sbjct: 141 EYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP 200
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
DS+LLV+ SDD +KI+++ TL GH+++V F P VS S D+SV++WD
Sbjct: 201 DSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWD 260
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181
V T C+ T H D V V +N +GS IVS D ++D
Sbjct: 261 VGTRTCIHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVYD 302
Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 62/206 (30%), Positives = 110/206 (53%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L+++L GH V SV S ASSS D I++W +GK K+I + +A+S
Sbjct: 56 LQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQMKSIDAGPVDAWTLAFS 115
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
DS+ L +G+ + I+ + SGK +L ++ ++P + SG+ D + I+
Sbjct: 116 PDSQHLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIF 175
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 198
D+ TGK L TL H+ P+ ++ F+ D L+V++S DG +I+D TL +
Sbjct: 176 DIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWV 235
Query: 199 VSFVKFSPNGKYILAATLDNTLKLWD 224
++ V F P+ + ++++ D ++K+WD
Sbjct: 236 LN-VAFCPDDTHFVSSSSDKSVKVWD 260
Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
Identities = 61/196 (31%), Positives = 106/196 (54%)
Query: 32 SVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDK 91
++ FSP+ + LA+ + + I+G GK E ++ I +A+S D + L SG+ D
Sbjct: 111 TLAFSPDSQHLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDG 170
Query: 92 TLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPA 151
+ I+++++GK L TL+GH+ + F+P S L+V+ S D ++I+DV+ TL
Sbjct: 171 IINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSG 230
Query: 152 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 211
H+ V V F D + VSSS D ++WD + C+ T D + V VK++ NG I
Sbjct: 231 HASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQ-VWGVKYNGNGSKI 289
Query: 212 LAATLDNTLKLWDSKV 227
++ D + ++D +
Sbjct: 290 VSVGDDQEIHVYDCPI 305
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 57/205 (27%), Positives = 107/205 (52%)
Query: 26 HTKAVSSVKFSPNG----EWLASSSADKLIKIWGAYDGKFEK--TISGHKLGISDVAWSS 79
H A+ SV + N E + + S D L+K+W D + E ++ GH+LG+ V S
Sbjct: 15 HDDAIWSVAWETNKKENIETVVTGSLDDLVKVWKWRDERLELQWSLEGHQLGVVSVDISH 74
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
+ S S D +++W+L +GK +K++ + F+P S + +G+ V I+
Sbjct: 75 TLPIAASSSLDAHIRLWDLENGKQMKSIDAGPVDAWTLAFSPDSQHLATGTHMGKVNIFG 134
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
V +GK +L + ++ ++ DG + S + DG+ I+D A+G+ L TL + P+
Sbjct: 135 VESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTL-EGHAMPI 193
Query: 200 SFVKFSPNGKYILAATLDNTLKLWD 224
+ FSP+ + ++ A+ D +K++D
Sbjct: 194 RSLTFSPDSQLLVTASDDGYIKIYD 218
Score = 195 (73.7 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 39/121 (32%), Positives = 65/121 (53%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L TL GH + S+ FSP+ + L ++S D IKI+ T+SGH + +VA+
Sbjct: 182 LLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFC 241
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
D VS S DK++K+W++ + C+ T H + V+ +N + IVS D+ + ++
Sbjct: 242 PDDTHFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVY 301
Query: 139 D 139
D
Sbjct: 302 D 302
>UNIPROTKB|F1RKU4 [details] [associations]
symbol:WDR61 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001162 "positive regulation of histone H3-K79
methylation" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:0055087 "Ski complex"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035327 "transcriptionally active chromatin"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0016593 "Cdc73/Paf1 complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GeneTree:ENSGT00700000104507
GO:GO:0055087 EMBL:CU467054 Ensembl:ENSSSCT00000001963 OMA:PPSEVWG
Uniprot:F1RKU4
Length = 287
Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 61/162 (37%), Positives = 93/162 (57%)
Query: 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 79
+++L K + S+ +SP+G++LAS + D +I I+ GK T+ GH + I + +S
Sbjct: 123 EYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP 182
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
DS+LLV+ SDD +KI+++ TL GH+++V F P VS S D+SV++WD
Sbjct: 183 DSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWD 242
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181
V T C+ T H D V V +N +GS IVS D I+D
Sbjct: 243 VGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYD 284
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 61/196 (31%), Positives = 107/196 (54%)
Query: 32 SVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDK 91
++ FSP+ ++LA+ + + I+G GK E ++ I +A+S D + L SG+ D
Sbjct: 93 TLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDG 152
Query: 92 TLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPA 151
+ I+++++GK L TL+GH+ + F+P S L+V+ S D ++I+DV+ TL
Sbjct: 153 IINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSG 212
Query: 152 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 211
H+ V V F D + VSSS D ++WD + C+ T D + V VK++ NG I
Sbjct: 213 HASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQ-VWGVKYNGNGSKI 271
Query: 212 LAATLDNTLKLWDSKV 227
++ D + ++D +
Sbjct: 272 VSVGDDQEIHIYDCPI 287
Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
Identities = 48/174 (27%), Positives = 94/174 (54%)
Query: 51 IKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGH 110
+++W +GK K+I + +A+S DS+ L +G+ + I+ + SGK +L
Sbjct: 70 VRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTR 129
Query: 111 SNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVS 170
++ ++P + SG+ D + I+D+ TGK L TL H+ P+ ++ F+ D L+V+
Sbjct: 130 GKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVT 189
Query: 171 SSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
+S DG +I+D TL + ++ V F P+ + ++++ D ++K+WD
Sbjct: 190 ASDDGYIKIYDVQHANLAGTLSGHASWVLN-VAFCPDDTHFVSSSSDKSVKVWD 242
Score = 195 (73.7 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 40/121 (33%), Positives = 65/121 (53%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L TL GH + S+ FSP+ + L ++S D IKI+ T+SGH + +VA+
Sbjct: 164 LLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFC 223
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
D VS S DK++K+W++ + C+ T H + V+ +N + IVS D+ + I+
Sbjct: 224 PDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIY 283
Query: 139 D 139
D
Sbjct: 284 D 284
Score = 191 (72.3 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 53/203 (26%), Positives = 99/203 (48%)
Query: 26 HTKAVSSVKFSPN----GEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
H A+ SV + N E + + S D L+K+W D K D+ WS +
Sbjct: 15 HDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDEKL------------DLQWSLEG 62
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
L S +++W+L +GK +K++ + F+P S + +G+ V I+ V
Sbjct: 63 HQLGVVS----VRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVE 118
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 201
+GK +L + ++ ++ DG + S + DG+ I+D A+G+ L TL + P+
Sbjct: 119 SGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTL-EGHAMPIRS 177
Query: 202 VKFSPNGKYILAATLDNTLKLWD 224
+ FSP+ + ++ A+ D +K++D
Sbjct: 178 LTFSPDSQLLVTASDDGYIKIYD 200
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 288 (106.4 bits), Expect = 6.3e-25, P = 6.3e-25
Identities = 59/176 (33%), Positives = 96/176 (54%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
+L GH++AV SV FSP G++LAS S D ++ W T GH+ + ++WS D
Sbjct: 109 SLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDG 168
Query: 82 RLLVSGSDDKTLKIWELSSGKCL-KTLKGHSNYVFCCNF-----NPQSNLIVSGSFDESV 135
+ L SG + + +W+ S+GK + + L GHS ++ ++ NP+ + S S D SV
Sbjct: 169 KKLASGCKNGQILLWDPSTGKQVGRALAGHSKWITALSWEPLHANPECRYVASSSKDGSV 228
Query: 136 RIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 191
R+WD G+C + L H+ V+ + + DG L+ S+S D ++W G +TL
Sbjct: 229 RVWDTTAGRCERILTGHTQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRTL 283
Score = 267 (99.0 bits), Expect = 1.4e-22, P = 1.4e-22
Identities = 47/116 (40%), Positives = 73/116 (62%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
+ GH ++ V FSP+ +AS+S DK IK+W GK+ ++ GH + +AWS+DSR
Sbjct: 368 MTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSR 427
Query: 83 LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
LLVSGS D TLK+W++ + K L GH++ V+ +++P + SG D+ +RIW
Sbjct: 428 LLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 258 (95.9 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 55/142 (38%), Positives = 84/142 (59%)
Query: 40 EWLASSSADKLIKIWG-AYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWEL 98
E L S S D + +W A D K ++GH+ I+ V +S DSR++ S S DK++K+W+
Sbjct: 342 ERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDG 401
Query: 99 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSA 158
+GK L +L+GH V+ ++ S L+VSGS D ++++WDV+ K LP H+D V A
Sbjct: 402 RTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYA 461
Query: 159 VHFNRDGSLIVSSSYDGLCRIW 180
V ++ DG + S D RIW
Sbjct: 462 VDWSPDGQRVASGGKDKCLRIW 483
Score = 226 (84.6 bits), Expect = 4.4e-18, P = 4.4e-18
Identities = 51/141 (36%), Positives = 77/141 (54%)
Query: 84 LVSGSDDKTLKIWELSSGKC-LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 142
LVSGSDD TL +W + K L + GH + F+P S +I S SFD+S+++WD RT
Sbjct: 344 LVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRT 403
Query: 143 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 202
GK L +L H V + ++ D L+VS S D ++WD + Q L + V V
Sbjct: 404 GKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKA-QKLAADLPGHADEVYAV 462
Query: 203 KFSPNGKYILAATLDNTLKLW 223
+SP+G+ + + D L++W
Sbjct: 463 DWSPDGQRVASGGKDKCLRIW 483
Score = 210 (79.0 bits), Expect = 2.5e-16, P = 2.5e-16
Identities = 56/205 (27%), Positives = 104/205 (50%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
L GHT++V+ +++ +G L S+S D+ IK+W A+DG +T+ GH ++ +A S+D
Sbjct: 242 LTGHTQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYA 300
Query: 83 LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD-VR 141
L + + L+ LK + + +VSGS D ++ +W
Sbjct: 301 LRTGAFEPAEASVNAQDLRGSLQELKERALSRYNLVRGRGLERLVSGSDDFTLFLWSPAE 360
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 201
K L + H ++ V F+ D +I S+S+D ++WD +G+ L +L V
Sbjct: 361 DKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASL-RGHVAAVYQ 419
Query: 202 VKFSPNGKYILAATLDNTLKLWDSK 226
+ +S + + +++ + D+TLK+WD K
Sbjct: 420 IAWSADSRLLVSGSSDSTLKVWDVK 444
Score = 203 (76.5 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 44/153 (28%), Positives = 80/153 (52%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-FEKTISGHKLGISDVAW-- 77
FT GH V S+ +SP+G+ LAS + I +W GK + ++GH I+ ++W
Sbjct: 150 FTCQGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGKQVGRALAGHSKWITALSWEP 209
Query: 78 ---SSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 134
+ + R + S S D ++++W+ ++G+C + L GH+ V C + L+ S S D +
Sbjct: 210 LHANPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDG-LLYSASQDRT 268
Query: 135 VRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSL 167
+++W G +TL H V+ + + D +L
Sbjct: 269 IKVWRAHDGVLCRTLQGHGHWVNTMALSTDYAL 301
Score = 155 (59.6 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 32/129 (24%), Positives = 67/129 (51%)
Query: 102 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHF 161
+C +L+GHS V F+P + SGS D +VR WD+ T T H V ++ +
Sbjct: 105 RCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISW 164
Query: 162 NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKF-----SPNGKYILAATL 216
+ DG + S +G +WD ++G+ + + + ++ + + +P +Y+ +++
Sbjct: 165 SPDGKKLASGCKNGQILLWDPSTGKQVGRALAGHSKWITALSWEPLHANPECRYVASSSK 224
Query: 217 DNTLKLWDS 225
D ++++WD+
Sbjct: 225 DGSVRVWDT 233
Score = 131 (51.2 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 26/75 (34%), Positives = 38/75 (50%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
+L GH AV + +S + L S S+D +K+W K + GH + V WS D
Sbjct: 409 SLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSPDG 468
Query: 82 RLLVSGSDDKTLKIW 96
+ + SG DK L+IW
Sbjct: 469 QRVASGGKDKCLRIW 483
>ZFIN|ZDB-GENE-030131-5987 [details] [associations]
symbol:taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:7955
"Danio rerio" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-5987
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OrthoDB:EOG4NCMCF EMBL:BC056820
IPI:IPI00498551 RefSeq:NP_956146.1 UniGene:Dr.80603
ProteinModelPortal:Q6PGV3 STRING:Q6PGV3 GeneID:334055
KEGG:dre:334055 InParanoid:Q6PGV3 NextBio:20810247
ArrayExpress:Q6PGV3 Uniprot:Q6PGV3
Length = 601
Score = 291 (107.5 bits), Expect = 6.6e-25, P = 6.6e-25
Identities = 68/222 (30%), Positives = 108/222 (48%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI--SGHKLGISDVAWSS 79
TL GH+ V F + L S S D ++ W F T+ GH + DV S
Sbjct: 349 TLRGHSGPVYRTAFLTDASGLLSCSEDSTVRYWDLKS--FTNTVLYRGHAYPVWDVDVSP 406
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
S + S D+T ++W + L+ GH + V C F+P SN I +GS D++VR+W
Sbjct: 407 CSLYFSTASHDRTARLWSFARTYPLRLYAGHLSDVDCVKFHPNSNYIATGSTDKTVRLWS 466
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
R G ++ H PV + F+ +G + S+ D ++WD ASG K L + +
Sbjct: 467 TRQGASVRLFTGHRGPVLTLAFSPNGKYLASAGEDQRLKLWDLASGGLFKDLRGHTDT-I 525
Query: 200 SFVKFSPNGKYILAATLDNTLKLWDSKVV---TPAIICSTPL 238
S + FS + + +A++DNT+++WD + P CS+ L
Sbjct: 526 SSLSFSQDSSLVASASMDNTVRVWDIRNAHGSAPTDGCSSEL 567
Score = 255 (94.8 bits), Expect = 5.4e-21, P = 5.4e-21
Identities = 45/125 (36%), Positives = 76/125 (60%)
Query: 17 YVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA 76
Y L+ AGH V VKF PN ++A+ S DK +++W G + +GH+ + +A
Sbjct: 429 YPLRL-YAGHLSDVDCVKFHPNSNYIATGSTDKTVRLWSTRQGASVRLFTGHRGPVLTLA 487
Query: 77 WSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 136
+S + + L S +D+ LK+W+L+SG K L+GH++ + +F+ S+L+ S S D +VR
Sbjct: 488 FSPNGKYLASAGEDQRLKLWDLASGGLFKDLRGHTDTISSLSFSQDSSLVASASMDNTVR 547
Query: 137 IWDVR 141
+WD+R
Sbjct: 548 VWDIR 552
Score = 226 (84.6 bits), Expect = 7.3e-18, P = 7.3e-18
Identities = 52/162 (32%), Positives = 81/162 (50%)
Query: 63 KTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQ 122
KT+ GH + A+ +D+ L+S S+D T++ W+L S +GH+ V+ + +P
Sbjct: 348 KTLRGHSGPVYRTAFLTDASGLLSCSEDSTVRYWDLKSFTNTVLYRGHAYPVWDVDVSPC 407
Query: 123 SNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 182
S + S D + R+W L+ H V V F+ + + I + S D R+W T
Sbjct: 408 SLYFSTASHDRTARLWSFARTYPLRLYAGHLSDVDCVKFHPNSNYIATGSTDKTVRLWST 467
Query: 183 ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
G ++ L PV + FSPNGKY+ +A D LKLWD
Sbjct: 468 RQGASVR-LFTGHRGPVLTLAFSPNGKYLASAGEDQRLKLWD 508
Score = 187 (70.9 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 56/202 (27%), Positives = 96/202 (47%)
Query: 26 HTKAV-SSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLL 84
HT+ + ++ + S + LA+ + +K+W K + HK +S + + D +L
Sbjct: 278 HTEQLLNTAEVSADSRLLAAGFDNSAVKLWSLRARKLKA--GPHKADVSKIRLACD--VL 333
Query: 85 VSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK 144
+DD E +SG +KTL+GHS V+ F ++ ++S S D +VR WD+++
Sbjct: 334 EEEADD------EDASGSEIKTLRGHSGPVYRTAFLTDASGLLSCSEDSTVRYWDLKSFT 387
Query: 145 CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKF 204
H+ PV V + ++S+D R+W A L+ L V VKF
Sbjct: 388 NTVLYRGHAYPVWDVDVSPCSLYFSTASHDRTARLWSFARTYPLR-LYAGHLSDVDCVKF 446
Query: 205 SPNGKYILAATLDNTLKLWDSK 226
PN YI + D T++LW ++
Sbjct: 447 HPNSNYIATGSTDKTVRLWSTR 468
>UNIPROTKB|E1C8E9 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966 GO:GO:0004402
GO:GO:0030914 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:YVDSEGP EMBL:AADN02035649 EMBL:AADN02035650 IPI:IPI00584483
ProteinModelPortal:E1C8E9 Ensembl:ENSGALT00000018081 Uniprot:E1C8E9
Length = 560
Score = 290 (107.1 bits), Expect = 6.8e-25, P = 6.8e-25
Identities = 66/205 (32%), Positives = 103/205 (50%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI--SGHKLGISDVAWSSD 80
L GH V S +F + L S S D I+ W F T+ GH + D+ S
Sbjct: 338 LRGHCGPVYSTRFLSDSSGLLSCSEDMSIRYWDLRS--FTNTVLYQGHAYPVWDLDISPC 395
Query: 81 SRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 140
S S S D+T ++W L+ GH V C F+P SN + +GS D++VR+W
Sbjct: 396 SLYFASASHDRTARLWSFDRTYPLRIYAGHLLDVDCVKFHPNSNYLATGSTDKTVRLWST 455
Query: 141 RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD-DNPPV 199
+ G ++ H PV A+ F+ +G + S+ D ++WD ASG K L DN +
Sbjct: 456 QQGNSVRLFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDN--I 513
Query: 200 SFVKFSPNGKYILAATLDNTLKLWD 224
+ + FSP+ I +A++DN++++WD
Sbjct: 514 TSLTFSPDSSLIASASMDNSVRVWD 538
Score = 272 (100.8 bits), Expect = 6.3e-23, P = 6.3e-23
Identities = 50/129 (38%), Positives = 77/129 (59%)
Query: 17 YVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA 76
Y L+ AGH V VKF PN +LA+ S DK +++W G + +GH+ + +A
Sbjct: 417 YPLRI-YAGHLLDVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALA 475
Query: 77 WSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 136
+S + + L S +D+ LK+W+L+SG K L+GH++ + F+P S+LI S S D SVR
Sbjct: 476 FSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVR 535
Query: 137 IWDVRTGKC 145
+WD+R C
Sbjct: 536 VWDIRNTYC 544
Score = 263 (97.6 bits), Expect = 6.1e-22, P = 6.1e-22
Identities = 51/164 (31%), Positives = 87/164 (53%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKLGISDVAWSSDSRL 83
GH V + SP + AS+S D+ ++W ++D + I +GH L + V + +S
Sbjct: 382 GHAYPVWDLDISPCSLYFASASHDRTARLW-SFDRTYPLRIYAGHLLDVDCVKFHPNSNY 440
Query: 84 LVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 143
L +GS DKT+++W G ++ GH V F+P + S D+ +++WD+ +G
Sbjct: 441 LATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLASG 500
Query: 144 KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC 187
K L H+D ++++ F+ D SLI S+S D R+WD + C
Sbjct: 501 TLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRNTYC 544
Score = 214 (80.4 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 51/162 (31%), Positives = 79/162 (48%)
Query: 63 KTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQ 122
K + GH + + SDS L+S S+D +++ W+L S +GH+ V+ + +P
Sbjct: 336 KILRGHCGPVYSTRFLSDSSGLLSCSEDMSIRYWDLRSFTNTVLYQGHAYPVWDLDISPC 395
Query: 123 SNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 182
S S S D + R+W L+ H V V F+ + + + + S D R+W T
Sbjct: 396 SLYFASASHDRTARLWSFDRTYPLRIYAGHLLDVDCVKFHPNSNYLATGSTDKTVRLWST 455
Query: 183 ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
G ++ L PV + FSPNGKY+ +A D LKLWD
Sbjct: 456 QQGNSVR-LFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWD 496
Score = 173 (66.0 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 50/197 (25%), Positives = 88/197 (44%)
Query: 30 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSD 89
+++ + SPN + LA+ + +K+W K + H + +S + + D D
Sbjct: 271 LNTAEISPNSKLLAAGFDNSCVKLWSLRSKKLKS--EPHLVDVSRIRLACDILDEEEEED 328
Query: 90 DKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTL 149
D S+G +K L+GH V+ F S+ ++S S D S+R WD+R+
Sbjct: 329 D--------SAGTEMKILRGHCGPVYSTRFLSDSSGLLSCSEDMSIRYWDLRSFTNTVLY 380
Query: 150 PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK 209
H+ PV + + S+S+D R+W L+ + V VKF PN
Sbjct: 381 QGHAYPVWDLDISPCSLYFASASHDRTARLWSFDRTYPLR-IYAGHLLDVDCVKFHPNSN 439
Query: 210 YILAATLDNTLKLWDSK 226
Y+ + D T++LW ++
Sbjct: 440 YLATGSTDKTVRLWSTQ 456
Score = 161 (61.7 bits), Expect = 9.8e-10, P = 9.8e-10
Identities = 30/88 (34%), Positives = 51/88 (57%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLL 84
GH V ++ FSPNG++LAS+ D+ +K+W G K + GH I+ + +S DS L+
Sbjct: 466 GHRGPVLALAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLI 525
Query: 85 VSGSDDKTLKIWELSSGKCLKTLKGHSN 112
S S D ++++W++ + C G S+
Sbjct: 526 ASASMDNSVRVWDIRNTYCNAPADGSSS 553
>UNIPROTKB|B7TCI5 [details] [associations]
symbol:TBL1X "Transducin beta-like 1" species:9913 "Bos
taurus" [GO:0006508 "proteolysis" evidence=ISS] [GO:0007605
"sensory perception of sound" evidence=ISS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0008013 "beta-catenin binding" evidence=ISS]
[GO:0042393 "histone binding" evidence=ISS] [GO:0005876 "spindle
microtubule" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006508
GO:GO:0003682 GO:GO:0005667 GO:GO:0000122 GO:GO:0044212
GO:GO:0007605 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0045444 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 GeneTree:ENSGT00690000102024 KO:K04508
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:6907
OMA:RAHSVNN EMBL:FJ195366 EMBL:DAAA02075574 IPI:IPI00717120
RefSeq:NP_001138704.1 UniGene:Bt.27699 STRING:B7TCI5
Ensembl:ENSBTAT00000024105 GeneID:515972 KEGG:bta:515972
NextBio:20872077 Uniprot:B7TCI5
Length = 528
Score = 289 (106.8 bits), Expect = 7.1e-25, P = 7.1e-25
Identities = 62/217 (28%), Positives = 110/217 (50%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L TL H + ++K++ G ++ S+ DK IW A+ G+ ++ H DV W
Sbjct: 272 LASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ 331
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
+++ S S D + + L + +KT +GH+N V ++P L+ S S D +++IW
Sbjct: 332 NNTTF-ASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIW 390
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGS---------LIVSSSYDGLCRIWDTASGQCLK 189
++ C+ L AHS + + ++ G ++ S+S+D R+WD G CL
Sbjct: 391 SMKQDTCVHDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVERGVCLH 450
Query: 190 TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSK 226
TL P S V FSP+GKY+ + + D + +W+++
Sbjct: 451 TLTKHQEPVYS-VAFSPDGKYLASGSFDKCVHIWNTQ 486
Score = 268 (99.4 bits), Expect = 1.4e-22, P = 1.4e-22
Identities = 58/157 (36%), Positives = 81/157 (51%)
Query: 38 NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWE 97
N AS S D I + + KT GH ++ + W LL S SDD TLKIW
Sbjct: 332 NNTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWS 391
Query: 98 LSSGKCLKTLKGHSNYVFCCNF--------NPQSNLIV-SGSFDESVRIWDVRTGKCLKT 148
+ C+ L+ HS ++ + NP S++++ S SFD +VR+WDV G CL T
Sbjct: 392 MKQDTCVHDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVERGVCLHT 451
Query: 149 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 185
L H +PV +V F+ DG + S S+D IW+T SG
Sbjct: 452 LTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSG 488
Score = 227 (85.0 bits), Expect = 4.3e-18, P = 4.3e-18
Identities = 52/166 (31%), Positives = 83/166 (50%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS--- 78
T GHT V+++K+ P+G LAS S D +KIW + H I + WS
Sbjct: 358 TFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSPTG 417
Query: 79 ------SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 132
+ S +L S S D T+++W++ G CL TL H V+ F+P + SGSFD
Sbjct: 418 PATSNPNSSIMLASASFDSTVRLWDVERGVCLHTLTKHQEPVYSVAFSPDGKYLASGSFD 477
Query: 133 ESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LC 177
+ V IW+ ++G + + + + V +N G + +S+ DG +C
Sbjct: 478 KCVHIWNTQSGSLVHSYRG-TGGIFEVCWNARGDKVGASASDGSVC 522
Score = 225 (84.3 bits), Expect = 7.1e-18, P = 7.1e-18
Identities = 61/218 (27%), Positives = 98/218 (44%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD----GKFEKTI------SGHKL-- 70
L GH V ++P + LAS S D +IW + G + + GH +
Sbjct: 179 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPS 238
Query: 71 --GISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVS 128
++ + W+SD LL +GS D +IW G TL H +F +N + N I+S
Sbjct: 239 NKDVTSLDWNSDGTLLATGSYDGFARIWT-EDGNLASTLGQHKGPIFALKWNKKGNYILS 297
Query: 129 GSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCL 188
D++ IWD TG+ + P HS P V + ++ + S S D + + +
Sbjct: 298 AGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDW-QNNTTFASCSTDMCIHVCRLGCDRPV 356
Query: 189 KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSK 226
KT N V+ +K+ P+G + + + D TLK+W K
Sbjct: 357 KTFQGHTNE-VNAIKWDPSGMLLASCSDDMTLKIWSMK 393
Score = 154 (59.3 bits), Expect = 8.5e-09, P = 8.5e-09
Identities = 38/128 (29%), Positives = 65/128 (50%)
Query: 23 LAGHTKAVSSVKFSPNGE---------WLASSSADKLIKIWGAYDGKFEKTISGHKLGIS 73
L H+K + ++K+SP G LAS+S D +++W G T++ H+ +
Sbjct: 401 LQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVERGVCLHTLTKHQEPVY 460
Query: 74 DVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 133
VA+S D + L SGS DK + IW SG + + +G C +N + + + + + D
Sbjct: 461 SVAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYRGTGGIFEVC-WNARGDKVGASASDG 519
Query: 134 SVRIWDVR 141
SV + D+R
Sbjct: 520 SVCVLDLR 527
>UNIPROTKB|E2RBV0 [details] [associations]
symbol:WDR61 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001162 "positive regulation of histone
H3-K79 methylation" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:0055087 "Ski complex"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035327 "transcriptionally active chromatin"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0016593 "Cdc73/Paf1 complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
KO:K12602 OMA:IATGSHH EMBL:AAEX03002395 EMBL:AAEX03002396
RefSeq:XP_536215.2 ProteinModelPortal:E2RBV0
Ensembl:ENSCAFT00000022589 GeneID:479068 KEGG:cfa:479068
NextBio:20854309 Uniprot:E2RBV0
Length = 305
Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
Identities = 60/162 (37%), Positives = 93/162 (57%)
Query: 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 79
+++L K + S+ +SP+G++LAS + D +I I+ GK T+ GH + I + +S
Sbjct: 141 EYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP 200
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
DS+LLV+ SDD +KI+++ TL GH+++V F P VS S D+SV++WD
Sbjct: 201 DSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWD 260
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181
V T C+ T H D V V +N +GS IVS D ++D
Sbjct: 261 VGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVYD 302
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 62/196 (31%), Positives = 107/196 (54%)
Query: 32 SVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDK 91
++ FSP+ ++LA+ + + I+G GK E ++ I +A+S D + L SG+ D
Sbjct: 111 TLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDG 170
Query: 92 TLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPA 151
+ I+++++GK L TL+GH+ + F+P S L+V+ S D ++I+DV+ TL
Sbjct: 171 IINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSG 230
Query: 152 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 211
H+ V V F D + VSSS D ++WD + C+ T D + V VK++ NG I
Sbjct: 231 HASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQ-VWGVKYNGNGSKI 289
Query: 212 LAATLDNTLKLWDSKV 227
++ D + ++D V
Sbjct: 290 VSVGDDQEIHVYDCPV 305
Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 62/206 (30%), Positives = 110/206 (53%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L+++L GH V SV S ASSS D I++W +GK K+I + +A+S
Sbjct: 56 LQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLDNGKQIKSIDAGPVDAWTLAFS 115
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
DS+ L +G+ + I+ + SGK +L ++ ++P + SG+ D + I+
Sbjct: 116 PDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIF 175
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 198
D+ TGK L TL H+ P+ ++ F+ D L+V++S DG +I+D TL +
Sbjct: 176 DIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWV 235
Query: 199 VSFVKFSPNGKYILAATLDNTLKLWD 224
++ V F P+ + ++++ D ++K+WD
Sbjct: 236 LN-VAFCPDDTHFVSSSSDKSVKVWD 260
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 56/205 (27%), Positives = 107/205 (52%)
Query: 26 HTKAVSSVKFSPN----GEWLASSSADKLIKIWGAYDGKFEK--TISGHKLGISDVAWSS 79
H A+ SV + N E + + S D L+K+W D + + ++ GH+LG+ V S
Sbjct: 15 HDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWCDERLDLQWSLEGHQLGVVSVDISH 74
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
+ S S D +++W+L +GK +K++ + F+P S + +G+ V I+
Sbjct: 75 TLPIAASSSLDAHIRLWDLDNGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFG 134
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
V +GK +L + ++ ++ DG + S + DG+ I+D A+G+ L TL + P+
Sbjct: 135 VESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTL-EGHAMPI 193
Query: 200 SFVKFSPNGKYILAATLDNTLKLWD 224
+ FSP+ + ++ A+ D +K++D
Sbjct: 194 RSLTFSPDSQLLVTASDDGYIKIYD 218
Score = 194 (73.4 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 39/121 (32%), Positives = 65/121 (53%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L TL GH + S+ FSP+ + L ++S D IKI+ T+SGH + +VA+
Sbjct: 182 LLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFC 241
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
D VS S DK++K+W++ + C+ T H + V+ +N + IVS D+ + ++
Sbjct: 242 PDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVY 301
Query: 139 D 139
D
Sbjct: 302 D 302
>RGD|1359721 [details] [associations]
symbol:Btrc "beta-transducin repeat containing E3 ubiquitin
protein ligase" species:10116 "Rattus norvegicus" [GO:0000209
"protein polyubiquitination" evidence=IEA;ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;ISO] [GO:0006470
"protein dephosphorylation" evidence=IEA;ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;ISO]
[GO:0008013 "beta-catenin binding" evidence=IEA;ISO] [GO:0016567
"protein ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA;ISO] [GO:0030163 "protein catabolic
process" evidence=ISO] [GO:0031648 "protein destabilization"
evidence=IEA;ISO] [GO:0033598 "mammary gland epithelial cell
proliferation" evidence=IEA;ISO] [GO:0042753 "positive regulation
of circadian rhythm" evidence=IEA;ISO] [GO:0043122 "regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA;ISO] [GO:0045309
"protein phosphorylated amino acid binding" evidence=IEA;ISO]
[GO:0045862 "positive regulation of proteolysis" evidence=IEA;ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA;ISO] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA;ISO]
[GO:0061136 "regulation of proteasomal protein catabolic process"
evidence=IEA;ISO] [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 CTD:8945 HOGENOM:HOG000006638 HOVERGEN:HBG002521
KO:K03362 OrthoDB:EOG4F1X2M EMBL:BC085125 IPI:IPI00951294
RefSeq:NP_001007149.2 UniGene:Rn.21800 SMR:Q5U4E5 STRING:Q5U4E5
Ensembl:ENSRNOT00000064259 GeneID:361765 KEGG:rno:361765
UCSC:RGD:1359721 InParanoid:Q5U4E5 NextBio:677539
Genevestigator:Q5U4E5 Uniprot:Q5U4E5
Length = 506
Score = 288 (106.4 bits), Expect = 7.7e-25, P = 7.7e-25
Identities = 64/172 (37%), Positives = 99/172 (57%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L+ L GH AV+ V F + +++ S+S D+ IK+W +F +T++GHK GI+ + +
Sbjct: 319 LRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR 376
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
RL+VSGS D T+++W++ G CL+ L+GH V C F+ + IVSG++D +++W
Sbjct: 377 D--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVW 432
Query: 139 DVRTGK---------CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181
D+ CL+TL HS V + F D IVSSS+D IWD
Sbjct: 433 DLMAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWD 482
Score = 287 (106.1 bits), Expect = 9.9e-25, P = 9.9e-25
Identities = 67/215 (31%), Positives = 116/215 (53%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW---GAYDGKFEKTISGHKLGISDVAWS 78
TL H +AV ++F+ NG + + S D+ I +W D + + GH+ ++ V +
Sbjct: 279 TLIHHCEAVLHLRFN-NG-MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF- 335
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
D + +VS S D+T+K+W S+ + ++TL GH + C + + L+VSGS D ++R+W
Sbjct: 336 -DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLW 392
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT---------ASGQCLK 189
D+ G CL+ L H + V + F D IVS +YDG ++WD A CL+
Sbjct: 393 DIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLMAALDPRAPAGTLCLR 450
Query: 190 TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
TL++ V ++F I++++ D+T+ +WD
Sbjct: 451 TLVEHSGR-VFRLQFDEF--QIVSSSHDDTILIWD 482
Score = 237 (88.5 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 52/148 (35%), Positives = 87/148 (58%)
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
D + +VSG D T+KIW+ S+ +C + L GH+ V C ++ + +I++GS D +VR+WD
Sbjct: 213 DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDER--VIITGSSDSTVRVWD 270
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ--CLKTLIDDDNP 197
V G+ L TL H + V + FN ++V+ S D +WD AS L+ ++
Sbjct: 271 VNAGEMLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 328
Query: 198 PVSFVKFSPNGKYILAATLDNTLKLWDS 225
V+ V F + KYI++A+ D T+K+W++
Sbjct: 329 AVNVVDF--DDKYIVSASGDRTIKVWNT 354
Score = 222 (83.2 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 52/186 (27%), Positives = 104/186 (55%)
Query: 42 LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSG 101
+ S D IKIW + ++ ++GH G S + D R++++GS D T+++W++++G
Sbjct: 217 IVSGLRDNTIKIWDKSTLECKRILTGHT-G-SVLCLQYDERVIITGSSDSTVRVWDVNAG 274
Query: 102 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCL---KTLPAHSDPVSA 158
+ L TL H V FN + ++V+ S D S+ +WD+ + + + L H V+
Sbjct: 275 EMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNV 332
Query: 159 VHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN 218
V F D IVS+S D ++W+T++ + ++TL + ++ +++ + +++ + DN
Sbjct: 333 VDF--DDKYIVSASGDRTIKVWNTSTCEFVRTL-NGHKRGIACLQY--RDRLVVSGSSDN 387
Query: 219 TLKLWD 224
T++LWD
Sbjct: 388 TIRLWD 393
Score = 220 (82.5 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 54/208 (25%), Positives = 109/208 (52%)
Query: 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 79
K L GHT +V +++ + + S+D +++W G+ T+ H + + +++
Sbjct: 237 KRILTGHTGSVLCLQYDERV--IITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNN 294
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCL---KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 136
++V+ S D+++ +W+++S + + L GH V +F+ + IVS S D +++
Sbjct: 295 G--MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIK 350
Query: 137 IWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 196
+W+ T + ++TL H ++ + + RD L+VS S D R+WD G CL+ L +
Sbjct: 351 VWNTSTCEFVRTLNGHKRGIACLQY-RD-RLVVSGSSDNTIRLWDIECGACLRVL-EGHE 407
Query: 197 PPVSFVKFSPNGKYILAATLDNTLKLWD 224
V ++F + K I++ D +K+WD
Sbjct: 408 ELVRCIRF--DNKRIVSGAYDGKIKVWD 433
Score = 146 (56.5 bits), Expect = 8.3e-08, P = 8.3e-08
Identities = 40/151 (26%), Positives = 72/151 (47%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GH + ++ +++ + S S+D I++W G + + GH+ + + + D+
Sbjct: 362 TLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DN 417
Query: 82 RLLVSGSDDKTLKIWELSSGK---------CLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 132
+ +VSG+ D +K+W+L + CL+TL HS VF F+ IVS S D
Sbjct: 418 KRIVSGAYDGKIKVWDLMAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQ--IVSSSHD 475
Query: 133 ESVRIWDVRTGKCLKTLPAHSDPVSAVHFNR 163
+++ IWD P S + + +R
Sbjct: 476 DTILIWDFLNDPATHAEPPRSPSRTYTYISR 506
>FB|FBgn0030365 [details] [associations]
symbol:Tango4 "Transport and Golgi organization 4"
species:7227 "Drosophila melanogaster" [GO:0003674
"molecular_function" evidence=ND] [GO:0009306 "protein secretion"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0071011 "precatalytic spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009306 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 GO:GO:0007030 HSSP:P16649
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:AY051707
RefSeq:NP_572778.1 UniGene:Dm.4503 SMR:Q9VYQ9 MINT:MINT-757865
STRING:Q9VYQ9 EnsemblMetazoa:FBtr0073622 GeneID:32168
KEGG:dme:Dmel_CG1796 UCSC:CG1796-RA CTD:32168 FlyBase:FBgn0030365
InParanoid:Q9VYQ9 OrthoDB:EOG4C2FRR GenomeRNAi:32168 NextBio:777227
Uniprot:Q9VYQ9
Length = 482
Score = 287 (106.1 bits), Expect = 7.9e-25, P = 7.9e-25
Identities = 60/205 (29%), Positives = 106/205 (51%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L ++GH V + P EW A+ + D++IKIW GK + +++GH + VA S
Sbjct: 164 LSRVISGHLGWVRCIAVEPGNEWFATGAGDRVIKIWDLASGKLKLSLTGHVSTVRGVAVS 223
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
+ L S +D+ +K W+L K ++ GH + V+ +P +++ + D + RIW
Sbjct: 224 TKHPYLFSCGEDRQVKCWDLEYNKVIRHYHGHLSAVYSLALHPTIDVLATSGRDSTARIW 283
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 198
D+RT + TL H++ V++V I++ S+D R+WD A+G+ + TL +
Sbjct: 284 DMRTKANVHTLTGHTNTVASVVAQATNPQIITGSHDSTVRLWDLAAGKSVCTLTNHKKSV 343
Query: 199 VSFVKFSPNGKYILAATLDNTLKLW 223
S V P+ Y+ A+ + +K W
Sbjct: 344 RSIV-LHPS-LYMFASASPDNIKQW 366
Score = 211 (79.3 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 53/206 (25%), Positives = 99/206 (48%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLL 84
GH AV S+ P + LA+S D +IW T++GH ++ V + + +
Sbjct: 254 GHLSAVYSLALHPTIDVLATSGRDSTARIWDMRTKANVHTLTGHTNTVASVVAQATNPQI 313
Query: 85 VSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK 144
++GS D T+++W+L++GK + TL H V +P + S S D +++ W GK
Sbjct: 314 ITGSHDSTVRLWDLAAGKSVCTLTNHKKSVRSIVLHPSLYMFASASPD-NIKQWRCPEGK 372
Query: 145 CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG---QCLKTLID----DDNP 197
++ + H+ V+ + N +G ++VS +G WD +G Q + + D
Sbjct: 373 FVQNISGHTSIVNCMAANSEG-VLVSGGDNGTMFFWDWRTGYNFQRFQAPVQPGSMDSEA 431
Query: 198 PVSFVKFSPNGKYILAATLDNTLKLW 223
+ + F +G ++ A D T+K++
Sbjct: 432 GIFAMCFDQSGSRLITAEADKTIKVY 457
Score = 189 (71.6 bits), Expect = 4.7e-14, P = 4.7e-14
Identities = 47/171 (27%), Positives = 81/171 (47%)
Query: 54 WGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNY 113
W A K + ISGH + +A + +G+ D+ +KIW+L+SGK +L GH +
Sbjct: 158 WHA-PWKLSRVISGHLGWVRCIAVEPGNEWFATGAGDRVIKIWDLASGKLKLSLTGHVST 216
Query: 114 VFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY 173
V + + + S D V+ WD+ K ++ H V ++ + ++ +S
Sbjct: 217 VRGVAVSTKHPYLFSCGEDRQVKCWDLEYNKVIRHYHGHLSAVYSLALHPTIDVLATSGR 276
Query: 174 DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
D RIWD + + TL N S V + N + I+ + D+T++LWD
Sbjct: 277 DSTARIWDMRTKANVHTLTGHTNTVASVVAQATNPQ-IITGSHDSTVRLWD 326
Score = 177 (67.4 bits), Expect = 9.4e-13, P = 9.4e-13
Identities = 44/167 (26%), Positives = 78/167 (46%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GHT V+SV + + S D +++W GK T++ HK + +
Sbjct: 293 TLTGHTNTVASVVAQATNPQIITGSHDSTVRLWDLAAGKSVCTLTNHKKSVRSIVLHPSL 352
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
+ S S D +K W GK ++ + GH++ V C N + ++VSG + ++ WD R
Sbjct: 353 YMFASASPDN-IKQWRCPEGKFVQNISGHTSIVNCMAANSEG-VLVSGGDNGTMFFWDWR 410
Query: 142 TGKCLKTLPAHSDPVS--------AVHFNRDGSLIVSSSYDGLCRIW 180
TG + A P S A+ F++ GS ++++ D +++
Sbjct: 411 TGYNFQRFQAPVQPGSMDSEAGIFAMCFDQSGSRLITAEADKTIKVY 457
Score = 113 (44.8 bits), Expect = 0.00062, P = 0.00062
Identities = 29/131 (22%), Positives = 54/131 (41%)
Query: 96 WELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDP 155
W+LS + + GH +V C P + +G+ D ++IWD+ +GK +L H
Sbjct: 162 WKLS-----RVISGHLGWVRCIAVEPGNEWFATGAGDRVIKIWDLASGKLKLSLTGHVST 216
Query: 156 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT 215
V V + + S D + WD + ++ + S P + +
Sbjct: 217 VRGVAVSTKHPYLFSCGEDRQVKCWDLEYNKVIRHYHGHLSAVYSLA-LHPTIDVLATSG 275
Query: 216 LDNTLKLWDSK 226
D+T ++WD +
Sbjct: 276 RDSTARIWDMR 286
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 284 (105.0 bits), Expect = 9.1e-25, P = 9.1e-25
Identities = 59/176 (33%), Positives = 96/176 (54%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
+L GH++AV SV FSP G++LAS S D ++ W T GH+ + ++WS D
Sbjct: 60 SLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDG 119
Query: 82 RLLVSGSDDKTLKIWELSSGKCL-KTLKGHSNYVFCCNF-----NPQSNLIVSGSFDESV 135
+ L SG + + +W+ S+GK + + L GHS ++ ++ NP+ + S S D SV
Sbjct: 120 KTLASGCKNGQILLWDPSTGKQVGRVLAGHSKWITGLSWEPLHANPECRYMASSSKDGSV 179
Query: 136 RIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 191
R+WD G+C + L H+ V+ + + DG L+ S+S D ++W G +TL
Sbjct: 180 RVWDTTAGRCERILTGHTQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRTL 234
Score = 267 (99.0 bits), Expect = 8.3e-23, P = 8.3e-23
Identities = 47/116 (40%), Positives = 73/116 (62%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
+ GH ++ V FSP+ +AS+S DK IK+W GK+ ++ GH + +AWS+DSR
Sbjct: 319 MTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSR 378
Query: 83 LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
LLVSGS D TLK+W++ + K L GH++ V+ +++P + SG D+ +RIW
Sbjct: 379 LLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 434
Score = 257 (95.5 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 55/142 (38%), Positives = 84/142 (59%)
Query: 40 EWLASSSADKLIKIWG-AYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWEL 98
E L S S D + +W A D K ++GH+ I+ V +S DSR++ S S DK++K+W+
Sbjct: 293 ERLVSGSDDFTLFMWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDG 352
Query: 99 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSA 158
+GK L +L+GH V+ ++ S L+VSGS D ++++WDV+ K LP H+D V A
Sbjct: 353 RTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYA 412
Query: 159 VHFNRDGSLIVSSSYDGLCRIW 180
V ++ DG + S D RIW
Sbjct: 413 VDWSPDGQRVASGGKDKCLRIW 434
Score = 225 (84.3 bits), Expect = 4.2e-18, P = 4.2e-18
Identities = 51/141 (36%), Positives = 77/141 (54%)
Query: 84 LVSGSDDKTLKIWELSSGKC-LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 142
LVSGSDD TL +W + K L + GH + F+P S +I S SFD+S+++WD RT
Sbjct: 295 LVSGSDDFTLFMWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRT 354
Query: 143 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 202
GK L +L H V + ++ D L+VS S D ++WD + Q L + V V
Sbjct: 355 GKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKA-QKLAADLPGHADEVYAV 413
Query: 203 KFSPNGKYILAATLDNTLKLW 223
+SP+G+ + + D L++W
Sbjct: 414 DWSPDGQRVASGGKDKCLRIW 434
Score = 217 (81.4 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 59/207 (28%), Positives = 106/207 (51%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
L GHT++V+ +++ +G L S+S D+ IK+W A+DG +T+ GH ++ +A S+D
Sbjct: 193 LTGHTQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYA 251
Query: 83 LLVSGSDDKTLKIWELSSGKCLKTLKGHS--NYVFCCNFNPQSNLIVSGSFDESVRIWD- 139
L + I L+ LK + Y P+ +VSGS D ++ +W
Sbjct: 252 LRTGAFEPAEASINAQDLQGSLQELKDRALRRYNLVRGQGPER--LVSGSDDFTLFMWSP 309
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
K L + H ++ V F+ D +I S+S+D ++WD +G+ L +L V
Sbjct: 310 AEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASL-RGHVAAV 368
Query: 200 SFVKFSPNGKYILAATLDNTLKLWDSK 226
+ +S + + +++ + D+TLK+WD K
Sbjct: 369 YQIAWSADSRLLVSGSSDSTLKVWDVK 395
Score = 206 (77.6 bits), Expect = 5.1e-16, P = 5.1e-16
Identities = 44/153 (28%), Positives = 80/153 (52%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-FEKTISGHKLGISDVAW-- 77
FT GH V S+ +SP+G+ LAS + I +W GK + ++GH I+ ++W
Sbjct: 101 FTCQGHRHWVLSISWSPDGKTLASGCKNGQILLWDPSTGKQVGRVLAGHSKWITGLSWEP 160
Query: 78 ---SSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 134
+ + R + S S D ++++W+ ++G+C + L GH+ V C + L+ S S D +
Sbjct: 161 LHANPECRYMASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDG-LLYSASQDRT 219
Query: 135 VRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSL 167
+++W G +TL H V+ + + D +L
Sbjct: 220 IKVWRAHDGVLCRTLQGHGHWVNTMALSTDYAL 252
Score = 155 (59.6 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 32/129 (24%), Positives = 68/129 (52%)
Query: 102 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHF 161
+C +L+GHS V F+P + SGS D +VR WD+ T T H V ++ +
Sbjct: 56 RCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISW 115
Query: 162 NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKF-----SPNGKYILAATL 216
+ DG + S +G +WD ++G+ + ++ + ++ + + +P +Y+ +++
Sbjct: 116 SPDGKTLASGCKNGQILLWDPSTGKQVGRVLAGHSKWITGLSWEPLHANPECRYMASSSK 175
Query: 217 DNTLKLWDS 225
D ++++WD+
Sbjct: 176 DGSVRVWDT 184
Score = 131 (51.2 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 26/75 (34%), Positives = 38/75 (50%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
+L GH AV + +S + L S S+D +K+W K + GH + V WS D
Sbjct: 360 SLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSPDG 419
Query: 82 RLLVSGSDDKTLKIW 96
+ + SG DK L+IW
Sbjct: 420 QRVASGGKDKCLRIW 434
>ZFIN|ZDB-GENE-041114-104 [details] [associations]
symbol:tbl3 "transducin (beta)-like 3" species:7955
"Danio rerio" [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0010564 "regulation of cell
cycle process" evidence=IMP] [GO:0030098 "lymphocyte
differentiation" evidence=IMP] [GO:0048538 "thymus development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-041114-104 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048538 GO:GO:0006364 GO:GO:0032040
GO:GO:0010564 GO:GO:0030098 GeneTree:ENSGT00690000102183
EMBL:CABZ01040209 EMBL:CABZ01040210 EMBL:CABZ01079585
EMBL:CABZ01079586 IPI:IPI00489593 Ensembl:ENSDART00000074174
ArrayExpress:F1QYF0 Bgee:F1QYF0 Uniprot:F1QYF0
Length = 898
Score = 293 (108.2 bits), Expect = 9.9e-25, P = 9.9e-25
Identities = 72/223 (32%), Positives = 113/223 (50%)
Query: 25 GHTKAVSSVKFSP-NGEWLASSSADKLIKIW------GAYDG----KFEKTISGHKLGIS 73
GH+ AV S+ S +++ S S D +K+W GA +G K T H+ ++
Sbjct: 430 GHSNAVGSIACSRMKQQFVVSGSQDCTVKVWDLPETTGA-EGVMMMKARSTERAHEKDVN 488
Query: 74 DVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 133
V S + +LL SGS D+T K+W LS + L +GH V+ F+P ++ S S D
Sbjct: 489 SVCVSPNDKLLASGSQDRTAKLWALSDLRLLGVCRGHRRGVWSVQFSPVDQILGSASADG 548
Query: 134 SVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 193
SVRIW ++ CLKT H V + F G+ +VSS DGL ++W + +C++TL D
Sbjct: 549 SVRIWSIQDFSCLKTFEGHDASVLKIIFVSRGTQLVSSGSDGLVKLWTIKTNECVRTL-D 607
Query: 194 DDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICST 236
V + + ++ + D+T+ +W K+ II ST
Sbjct: 608 AHQDKVWALHGGCRDELMVTGSADSTITVWTDKLRKTVIIKST 650
Score = 268 (99.4 bits), Expect = 4.7e-22, P = 4.7e-22
Identities = 63/186 (33%), Positives = 95/186 (51%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
T H K V+SV SPN + LAS S D+ K+W D + GH+ G+ V +S
Sbjct: 479 TERAHEKDVNSVCVSPNDKLLASGSQDRTAKLWALSDLRLLGVCRGHRRGVWSVQFSPVD 538
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
++L S S D +++IW + CLKT +GH V F + +VS D V++W ++
Sbjct: 539 QILGSASADGSVRIWSIQDFSCLKTFEGHDASVLKIIFVSRGTQLVSSGSDGLVKLWTIK 598
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV-- 199
T +C++TL AH D V A+H L+V+ S D +W + + KT+I V
Sbjct: 599 TNECVRTLDAHQDKVWALHGGCRDELMVTGSADSTITVW---TDKLRKTVIIKSTKKVDQ 655
Query: 200 SFVKFS 205
S KF+
Sbjct: 656 SLFKFT 661
Score = 249 (92.7 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21
Identities = 52/165 (31%), Positives = 91/165 (55%)
Query: 30 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG-HKLGISDVAWSSDSRLLVSGS 88
+++ SP+ E L S+S L++ W + ++ H + ++ +++ S LL +G
Sbjct: 66 ITAFALSPDDEMLVSASRALLLRQWDWKQQQCRRSWRAVHSVPVASMSFDCTSTLLATGG 125
Query: 89 DDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQ-SNL-IVSGSFDESVRIWDVRTGKCL 146
D T+K+W++ C LKG S V F+P S L + S S D ++RIWD+R+ +C+
Sbjct: 126 CDGTIKLWDVIKQYCTHNLKGSSGVVHLVEFHPDISRLQLFSSSSDCAIRIWDLRSSRCV 185
Query: 147 KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 191
L +H PV+A+ F+ DG +VSS D +C +WD + +T+
Sbjct: 186 CVLESHYSPVTALAFSPDGHTLVSSGRDKICSVWDLQEQKVKRTI 230
Score = 219 (82.2 bits), Expect = 8.3e-17, P = 8.3e-17
Identities = 60/218 (27%), Positives = 98/218 (44%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIW--GAYDGKFEKTI--SGHKLGISDVAWS 78
L GHT + S+ G A+ + DK +++W G+ +GH + +A S
Sbjct: 382 LHGHTDTILSIDVFRKGSMFATCAKDKSVRVWRMDVSSGRVHCVAQGTGHSNAVGSIACS 441
Query: 79 S-DSRLLVSGSDDKTLKIWEL--SSG-------KCLKTLKGHSNYVFCCNFNPQSNLIVS 128
+ +VSGS D T+K+W+L ++G K T + H V +P L+ S
Sbjct: 442 RMKQQFVVSGSQDCTVKVWDLPETTGAEGVMMMKARSTERAHEKDVNSVCVSPNDKLLAS 501
Query: 129 GSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCL 188
GS D + ++W + + L H V +V F+ ++ S+S DG RIW CL
Sbjct: 502 GSQDRTAKLWALSDLRLLGVCRGHRRGVWSVQFSPVDQILGSASADGSVRIWSIQDFSCL 561
Query: 189 KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSK 226
KT D + + F G ++++ D +KLW K
Sbjct: 562 KTFEGHDASVLKII-FVSRGTQLVSSGSDGLVKLWTIK 598
Score = 198 (74.8 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 49/156 (31%), Positives = 80/156 (51%)
Query: 72 ISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKG-HSNYVFCCNFNPQSNLIVSGS 130
I+ A S D +LVS S L+ W+ +C ++ + HS V +F+ S L+ +G
Sbjct: 66 ITAFALSPDDEMLVSASRALLLRQWDWKQQQCRRSWRAVHSVPVASMSFDCTSTLLATGG 125
Query: 131 FDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLI--VSSSYDGLCRIWDTASGQCL 188
D ++++WDV C L S V V F+ D S + SSS D RIWD S +C+
Sbjct: 126 CDGTIKLWDVIKQYCTHNLKGSSGVVHLVEFHPDISRLQLFSSSSDCAIRIWDLRSSRCV 185
Query: 189 KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
+++ PV+ + FSP+G ++++ D +WD
Sbjct: 186 -CVLESHYSPVTALAFSPDGHTLVSSGRDKICSVWD 220
Score = 190 (71.9 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 50/180 (27%), Positives = 85/180 (47%)
Query: 24 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD-SR 82
A H+ V+S+ F LA+ D IK+W + G + V + D SR
Sbjct: 103 AVHSVPVASMSFDCTSTLLATGGCDGTIKLWDVIKQYCTHNLKGSSGVVHLVEFHPDISR 162
Query: 83 L-LVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
L L S S D ++IW+L S +C+ L+ H + V F+P + +VS D+ +WD++
Sbjct: 163 LQLFSSSSDCAIRIWDLRSSRCVCVLESHYSPVTALAFSPDGHTLVSSGRDKICSVWDLQ 222
Query: 142 TGKCLKTLPAH-----------SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 190
K +T+P + S S + D +V++ G+ R+WD++S +C+ T
Sbjct: 223 EQKVKRTIPVYEAVEGVVLLSGSADYSEMGVKSDALHLVTAGSKGVLRVWDSSSSRCVFT 282
Score = 154 (59.3 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 47/172 (27%), Positives = 86/172 (50%)
Query: 67 GHKLGISDVAW--SSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSN 124
G+ + DV + D+ + V+ ++ LK++ELS+ C + L GH++ + + + +
Sbjct: 342 GYNDDVLDVKFVGKDDTHIAVA-TNSSQLKVFELSTNSC-QILHGHTDTILSIDVFRKGS 399
Query: 125 LIVSGSFDESVRIW--DVRTGK--CLKTLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRI 179
+ + + D+SVR+W DV +G+ C+ HS+ V ++ +R +VS S D ++
Sbjct: 400 MFATCAKDKSVRVWRMDVSSGRVHCVAQGTGHSNAVGSIACSRMKQQFVVSGSQDCTVKV 459
Query: 180 WDT-----ASG-QCLKTLIDD--DNPPVSFVKFSPNGKYILAATLDNTLKLW 223
WD A G +K + V+ V SPN K + + + D T KLW
Sbjct: 460 WDLPETTGAEGVMMMKARSTERAHEKDVNSVCVSPNDKLLASGSQDRTAKLW 511
Score = 115 (45.5 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 28/95 (29%), Positives = 49/95 (51%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKL--GI-------- 72
L H V+++ FSP+G L SS DK+ +W + K ++TI ++ G+
Sbjct: 188 LESHYSPVTALAFSPDGHTLVSSGRDKICSVWDLQEQKVKRTIPVYEAVEGVVLLSGSAD 247
Query: 73 -SDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKT 106
S++ SD+ LV+ L++W+ SS +C+ T
Sbjct: 248 YSEMGVKSDALHLVTAGSKGVLRVWDSSSSRCVFT 282
Score = 41 (19.5 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21
Identities = 6/12 (50%), Positives = 8/12 (66%)
Query: 177 CRIWDTASGQCL 188
C +W+T S CL
Sbjct: 724 CTVWNTNSRSCL 735
>UNIPROTKB|F1S8U2 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:CU469143 EMBL:CT737224
EMBL:CT737143 Ensembl:ENSSSCT00000011555 Uniprot:F1S8U2
Length = 506
Score = 287 (106.1 bits), Expect = 9.9e-25, P = 9.9e-25
Identities = 65/172 (37%), Positives = 100/172 (58%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L+ L GH AV+ V F + +++ S+S D+ IK+W +F +T++GHK GI+ + +
Sbjct: 319 LRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR 376
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
RL+VSGS D T+++W++ G CL+ L+GH V C F+ + IVSG++D +++W
Sbjct: 377 D--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVW 432
Query: 139 DV--------RTGK-CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181
D+ G CL+TL HS V + F D IVSSS+D IWD
Sbjct: 433 DLIAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWD 482
Score = 287 (106.1 bits), Expect = 9.9e-25, P = 9.9e-25
Identities = 67/215 (31%), Positives = 116/215 (53%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW---GAYDGKFEKTISGHKLGISDVAWS 78
TL H +AV ++F+ NG + + S D+ I +W D + + GH+ ++ V +
Sbjct: 279 TLIHHCEAVLHLRFN-NG-MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF- 335
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
D + +VS S D+T+K+W S+ + ++TL GH + C + + L+VSGS D ++R+W
Sbjct: 336 -DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLW 392
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT---------ASGQCLK 189
D+ G CL+ L H + V + F D IVS +YDG ++WD A CL+
Sbjct: 393 DIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLIAALDPRAPAGTLCLR 450
Query: 190 TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
TL++ V ++F I++++ D+T+ +WD
Sbjct: 451 TLVEHSGR-VFRLQFDEF--QIVSSSHDDTILIWD 482
Score = 242 (90.2 bits), Expect = 8.9e-20, P = 8.9e-20
Identities = 53/148 (35%), Positives = 88/148 (59%)
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
D + +VSG D T+KIW+ S+ +C + L GH+ V C ++ + +I++GS D +VR+WD
Sbjct: 213 DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDER--VIITGSSDSTVRVWD 270
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ--CLKTLIDDDNP 197
V TG+ L TL H + V + FN ++V+ S D +WD AS L+ ++
Sbjct: 271 VNTGEMLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 328
Query: 198 PVSFVKFSPNGKYILAATLDNTLKLWDS 225
V+ V F + KYI++A+ D T+K+W++
Sbjct: 329 AVNVVDF--DDKYIVSASGDRTIKVWNT 354
Score = 222 (83.2 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 52/186 (27%), Positives = 104/186 (55%)
Query: 42 LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSG 101
+ S D IKIW + ++ ++GH G S + D R++++GS D T+++W++++G
Sbjct: 217 IVSGLRDNTIKIWDKSTLECKRILTGHT-G-SVLCLQYDERVIITGSSDSTVRVWDVNTG 274
Query: 102 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCL---KTLPAHSDPVSA 158
+ L TL H V FN + ++V+ S D S+ +WD+ + + + L H V+
Sbjct: 275 EMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNV 332
Query: 159 VHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN 218
V F D IVS+S D ++W+T++ + ++TL + ++ +++ + +++ + DN
Sbjct: 333 VDF--DDKYIVSASGDRTIKVWNTSTCEFVRTL-NGHKRGIACLQY--RDRLVVSGSSDN 387
Query: 219 TLKLWD 224
T++LWD
Sbjct: 388 TIRLWD 393
Score = 221 (82.9 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 54/208 (25%), Positives = 109/208 (52%)
Query: 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 79
K L GHT +V +++ + + S+D +++W G+ T+ H + + +++
Sbjct: 237 KRILTGHTGSVLCLQYDERV--IITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNN 294
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCL---KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 136
++V+ S D+++ +W+++S + + L GH V +F+ + IVS S D +++
Sbjct: 295 G--MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIK 350
Query: 137 IWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 196
+W+ T + ++TL H ++ + + RD L+VS S D R+WD G CL+ L +
Sbjct: 351 VWNTSTCEFVRTLNGHKRGIACLQY-RD-RLVVSGSSDNTIRLWDIECGACLRVL-EGHE 407
Query: 197 PPVSFVKFSPNGKYILAATLDNTLKLWD 224
V ++F + K I++ D +K+WD
Sbjct: 408 ELVRCIRF--DNKRIVSGAYDGKIKVWD 433
Score = 148 (57.2 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 41/151 (27%), Positives = 74/151 (49%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GH + ++ +++ + S S+D I++W G + + GH+ + + + D+
Sbjct: 362 TLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DN 417
Query: 82 RLLVSGSDDKTLKIWEL--------SSGK-CLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 132
+ +VSG+ D +K+W+L +G CL+TL HS VF F+ IVS S D
Sbjct: 418 KRIVSGAYDGKIKVWDLIAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQ--IVSSSHD 475
Query: 133 ESVRIWDVRTGKCLKTLPAHSDPVSAVHFNR 163
+++ IWD + P S + + +R
Sbjct: 476 DTILIWDFLNDPAAQAEPPRSPSRTYTYISR 506
>UNIPROTKB|F1NM37 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 OMA:HHFRGSP GeneTree:ENSGT00690000102183
EMBL:AADN02023671 EMBL:AADN02023670 IPI:IPI00583117
Ensembl:ENSGALT00000008918 Uniprot:F1NM37
Length = 812
Score = 292 (107.8 bits), Expect = 1.1e-24, P = 1.1e-24
Identities = 56/161 (34%), Positives = 89/161 (55%)
Query: 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 79
+ T GH K ++SV SPN + +A+ S D+L K+W D +GHK GI V +S
Sbjct: 483 QMTERGHDKDINSVAVSPNDKLIATGSQDRLAKLWSCPDCSLLGVFTGHKRGIWCVQFSP 542
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
++L + S D TLK+W L CLKT +GH V F + ++SG D +++W
Sbjct: 543 VDQILATSSADGTLKLWGLQDFSCLKTFEGHDASVLKIIFVSRGTQLLSGGSDGLLKLWT 602
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 180
++T +C+KTL H D + +H N+ ++V++S D +W
Sbjct: 603 IKTNECVKTLDGHEDKIWGLHTNKQDDMVVTASSDSSITLW 643
Score = 263 (97.6 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 65/222 (29%), Positives = 110/222 (49%)
Query: 30 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG-HKLGISDVAWSSDSRLLVSGS 88
++S SP+ E L + S L+K W + + +T H ++ + + S S LL +G
Sbjct: 70 ITSFVLSPDDEVLVTGSRALLLKQWNWRENRCVRTWKAVHIAPVATMVFDSTSTLLATGG 129
Query: 89 DDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQ-SNL-IVSGSFDESVRIWDVRTGKCL 146
D T+KIW++ C LKG S V F+P S L + S S D +RIWD+ + KC+
Sbjct: 130 CDSTIKIWDMIKQYCTHNLKGSSGVVHLVEFHPDISRLQLFSSSMDYKIRIWDLNSSKCV 189
Query: 147 KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV---- 202
L H V+++ F DG+ ++SS D +C +W+ + + ++T+ ++ + +
Sbjct: 190 AVLDGHFSAVTSLAFTADGNTLISSGRDKICMVWNLKTRESIRTIPIYESVEAAVLLPEQ 249
Query: 203 -KFSP-----NGKYILAATLDNTLKLWDSKVVTPAIICSTPL 238
FS G + L A LK+W+ V T A + S P+
Sbjct: 250 GDFSQLGVKKQGLHFLTAGSKGVLKVWE--VATAACVYSQPV 289
Score = 232 (86.7 bits), Expect = 6.0e-20, Sum P(2) = 6.0e-20
Identities = 44/162 (27%), Positives = 82/162 (50%)
Query: 62 EKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNP 121
+ T GH I+ VA S + +L+ +GS D+ K+W L GH ++C F+P
Sbjct: 483 QMTERGHDKDINSVAVSPNDKLIATGSQDRLAKLWSCPDCSLLGVFTGHKRGIWCVQFSP 542
Query: 122 QSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181
++ + S D ++++W ++ CLKT H V + F G+ ++S DGL ++W
Sbjct: 543 VDQILATSSADGTLKLWGLQDFSCLKTFEGHDASVLKIIFVSRGTQLLSGGSDGLLKLWT 602
Query: 182 TASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 223
+ +C+KTL D + + + ++ A+ D+++ LW
Sbjct: 603 IKTNECVKTL-DGHEDKIWGLHTNKQDDMVVTASSDSSITLW 643
Score = 182 (69.1 bits), Expect = 6.5e-13, P = 6.5e-13
Identities = 47/178 (26%), Positives = 84/178 (47%)
Query: 24 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD-SR 82
A H V+++ F LA+ D IKIW + G + V + D SR
Sbjct: 107 AVHIAPVATMVFDSTSTLLATGGCDSTIKIWDMIKQYCTHNLKGSSGVVHLVEFHPDISR 166
Query: 83 L-LVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
L L S S D ++IW+L+S KC+ L GH + V F N ++S D+ +W+++
Sbjct: 167 LQLFSSSMDYKIRIWDLNSSKCVAVLDGHFSAVTSLAFTADGNTLISSGRDKICMVWNLK 226
Query: 142 TGKCLKTLPAHSDPVSAV------HFN-----RDGSLIVSSSYDGLCRIWDTASGQCL 188
T + ++T+P + +AV F+ + G +++ G+ ++W+ A+ C+
Sbjct: 227 TRESIRTIPIYESVEAAVLLPEQGDFSQLGVKKQGLHFLTAGSKGVLKVWEVATAACV 284
Score = 156 (60.0 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 47/177 (26%), Positives = 72/177 (40%)
Query: 67 GHKLGISDVAWSS-DSRLLVSGSDDKTLKIWEL-----SSGKCL-----KTL------KG 109
GH G+ V+ S +V+ S D T+K+W + S K +TL +G
Sbjct: 429 GHAHGVGAVSCSRLKESFVVTSSQDCTIKVWNIPESLTSKAKAALISGPETLHAQMTERG 488
Query: 110 HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIV 169
H + +P LI +GS D ++W L H + V F+ ++
Sbjct: 489 HDKDINSVAVSPNDKLIATGSQDRLAKLWSCPDCSLLGVFTGHKRGIWCVQFSPVDQILA 548
Query: 170 SSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSK 226
+SS DG ++W CLKT D + + F G +L+ D LKLW K
Sbjct: 549 TSSADGTLKLWGLQDFSCLKTFEGHDASVLKII-FVSRGTQLLSGGSDGLLKLWTIK 604
Score = 136 (52.9 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 56/228 (24%), Positives = 97/228 (42%)
Query: 23 LAGHTKAVSSVKFSPNGEWLA--SSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 80
L G + V V+F P+ L SSS D I+IW K + GH ++ +A+++D
Sbjct: 148 LKGSSGVVHLVEFHPDISRLQLFSSSMDYKIRIWDLNSSKCVAVLDGHFSAVTSLAFTAD 207
Query: 81 SRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNL------------IVS 128
L+S DK +W L + + ++T+ + + Q + + +
Sbjct: 208 GNTLISSGRDKICMVWNLKTRESIRTIPIYESVEAAVLLPEQGDFSQLGVKKQGLHFLTA 267
Query: 129 GSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSL-----------IVSSSYDGLC 177
GS +++W+V T C+ + P +PV + + SL IV+ S +
Sbjct: 268 GS-KGVLKVWEVATAACVYSQPVPFEPVESEEEASEHSLTHCMLVPERNEIVTVSVEHNI 326
Query: 178 RIWDTASGQCLKTLIDDDNPPVSFVKF-SPNGKYILAATLDNTLKLWD 224
+D + Q K L N V VKF P +I+ AT LK+++
Sbjct: 327 VFYDAQTLQLRKQLAGY-NDEVLDVKFLGPGDSHIVVATNSPQLKVFE 373
Score = 41 (19.5 bits), Expect = 6.0e-20, Sum P(2) = 6.0e-20
Identities = 17/52 (32%), Positives = 23/52 (44%)
Query: 27 TKAVSSVKFSPNGEWLASSSADKLIK---IWGAYDGKFEKTISGHKLGISDV 75
T A S V+F N + S + K + + DGKF G KL + DV
Sbjct: 4 TAAGSVVRFKSN--YAVSRRIEPFYKGGRVQVSRDGKFMFCPCGTKLNVIDV 53
>DICTYBASE|DDB_G0293070 [details] [associations]
symbol:DDB_G0293070 "TROVE domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA;ISS] [GO:0005697 "telomerase holoenzyme complex"
evidence=ISS] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008858
InterPro:IPR015943 Pfam:PF00400 Pfam:PF05731 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50988 SMART:SM00320
dictyBase:DDB_G0293070 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003723 EMBL:AAFI02000199
GO:GO:0005697 KO:K11127 InterPro:IPR025139 Pfam:PF13271
RefSeq:XP_629304.1 ProteinModelPortal:Q54CB5 PRIDE:Q54CB5
EnsemblProtists:DDB0237515 GeneID:8629027 KEGG:ddi:DDB_G0293070
InParanoid:Q54CB5 OMA:LPSDWIE ProtClustDB:CLSZ2429313
Uniprot:Q54CB5
Length = 2430
Score = 293 (108.2 bits), Expect = 1.1e-24, Sum P(2) = 1.1e-24
Identities = 74/212 (34%), Positives = 115/212 (54%)
Query: 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 79
K T+ G ++ +S +G +AS+ D +I I+ A +G T+ GH IS ++S
Sbjct: 1515 KQTITGLEDGATACCYSRDGSMIASAGKDSIIHIFKASNGSELLTLVGHSNWISCFSFSD 1574
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIW 138
D + L S S D T+ +W+L G + K HS V C F+P +N L++S ++D S+ I+
Sbjct: 1575 DGKTLASSSWDNTVIVWDLIVGNQIHQFKDHSRAVNYCEFSPTANNLLMSCAWDSSIIIF 1634
Query: 139 DVRTGKCLKTL-PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW---DTASGQCLKTLIDD 194
+ + AHS PV++ ++ DG+LI SSS+DG +IW DT + LK +ID
Sbjct: 1635 NTSDKNIFRNFRSAHSKPVNSCCWSPDGTLIASSSWDGTIKIWNPFDTIAKDRLKHVIDA 1694
Query: 195 DNP--PVSFVKFSPNGKYILAATLDNTLKLWD 224
+ KFS N K ILA T+ N + L+D
Sbjct: 1695 SLSYGSIKSCKFSANSKQILATTMKNDVLLFD 1726
Score = 273 (101.2 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 63/206 (30%), Positives = 113/206 (54%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS-GHKLGISDVAWSSDS 81
L GHT+A++S+ FSP+G +AS+S D LIK+W K E TI H I+ ++++ +
Sbjct: 1824 LHGHTRAITSITFSPSGNLIASTSEDLLIKVWNVQTHKAEYTIEKAHNDPINCISFNPTN 1883
Query: 82 RL-LVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 140
L+S SDD + K+W + + +G +N + C ++P I + S D S+ ++
Sbjct: 1884 ECELISCSDDYSTKVWSRFTTSTTLSTEGSTNTIKHCVYSPDGKYIATVSRDCSIAVYLC 1943
Query: 141 RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 200
+ K L L H+D V+ F+ D +VS +D R+W+ + + L L + +
Sbjct: 1944 SSKKLLFRLKGHTDWVNFCTFSPDSKKLVSGGWDFNLRVWNIKTQKELLCL-KGHSSSIE 2002
Query: 201 FVKFSPNGKYILAATLDNTLKLWDSK 226
F+ + KYI++A+ D ++K+WD++
Sbjct: 2003 KAFFTKDQKYIISASFDGSVKVWDAQ 2028
Score = 267 (99.0 bits), Expect = 5.8e-22, Sum P(2) = 5.8e-22
Identities = 63/184 (34%), Positives = 97/184 (52%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLL 84
G T + +SP+G+++A+ S D I ++ K + GH ++ +S DS+ L
Sbjct: 1912 GSTNTIKHCVYSPDGKYIATVSRDCSIAVYLCSSKKLLFRLKGHTDWVNFCTFSPDSKKL 1971
Query: 85 VSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK 144
VSG D L++W + + K L LKGHS+ + F I+S SFD SV++WD + G
Sbjct: 1972 VSGGWDFNLRVWNIKTQKELLCLKGHSSSIEKAFFTKDQKYIISASFDGSVKVWDAQFGS 2031
Query: 145 CLKTLPAHSDPVSAVHFNRDGS-LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK 203
+ +L H +S V + D S I SSS DG+ + W +G CL TL P + V+
Sbjct: 2032 EITSL-RHQTRISDVVSSSDASGRIFSSSDDGIIKSWYPVAGSCLATLTGHSGP-IKQVQ 2089
Query: 204 FSPN 207
F+PN
Sbjct: 2090 FNPN 2093
Score = 263 (97.6 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 60/207 (28%), Positives = 105/207 (50%)
Query: 20 KFTLA-GHTKAVSSVKFSPNGEW-LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW 77
++T+ H ++ + F+P E L S S D K+W + + G I +
Sbjct: 1863 EYTIEKAHNDPINCISFNPTNECELISCSDDYSTKVWSRFTTSTTLSTEGSTNTIKHCVY 1922
Query: 78 SSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 137
S D + + + S D ++ ++ SS K L LKGH+++V C F+P S +VSG +D ++R+
Sbjct: 1923 SPDGKYIATVSRDCSIAVYLCSSKKLLFRLKGHTDWVNFCTFSPDSKKLVSGGWDFNLRV 1982
Query: 138 WDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 197
W+++T K L L HS + F +D I+S+S+DG ++WD G + +L
Sbjct: 1983 WNIKTQKELLCLKGHSSSIEKAFFTKDQKYIISASFDGSVKVWDAQFGSEITSLRHQTR- 2041
Query: 198 PVSFVKFSPNGK-YILAATLDNTLKLW 223
+S V S + I +++ D +K W
Sbjct: 2042 -ISDVVSSSDASGRIFSSSDDGIIKSW 2067
Score = 220 (82.5 bits), Expect = 4.8e-17, Sum P(2) = 4.8e-17
Identities = 54/208 (25%), Positives = 104/208 (50%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG-KFEKTISGHKLGISDVAWSSDS 81
+ H+K+V+ S +G ++ + S D K+W + G + + + +A+S
Sbjct: 1736 MGNHSKSVNHCSLSNDGNYIVTGSDDATAKVWSSTLGTQLTNFLIPGDCWANCLAFSPTQ 1795
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKT---LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
LL G+ D T++++++SS + L GH+ + F+P NLI S S D +++W
Sbjct: 1796 PLLAVGATDCTVRLFDVSSNTIYREVAKLHGHTRAITSITFSPSGNLIASTSEDLLIKVW 1855
Query: 139 DVRTGKCLKTLP-AHSDPVSAVHFNRDGSL-IVSSSYDGLCRIWDT-ASGQCLKTLIDDD 195
+V+T K T+ AH+DP++ + FN ++S S D ++W + L T +
Sbjct: 1856 NVQTHKAEYTIEKAHNDPINCISFNPTNECELISCSDDYSTKVWSRFTTSTTLST--EGS 1913
Query: 196 NPPVSFVKFSPNGKYILAATLDNTLKLW 223
+ +SP+GKYI + D ++ ++
Sbjct: 1914 TNTIKHCVYSPDGKYIATVSRDCSIAVY 1941
Score = 208 (78.3 bits), Expect = 8.7e-16, Sum P(2) = 8.7e-16
Identities = 55/207 (26%), Positives = 94/207 (45%)
Query: 26 HTKAVSSVKFSPNGEWLASSSA-DKLIKIWGAYDGK-FEKTISGHKLGISDVAWSSDSRL 83
H++AV+ +FSP L S A D I I+ D F S H ++ WS D L
Sbjct: 1605 HSRAVNYCEFSPTANNLLMSCAWDSSIIIFNTSDKNIFRNFRSAHSKPVNSCCWSPDGTL 1664
Query: 84 LVSGSDDKTLKIWE----LSSGKCLKTLKGHSNY--VFCCNFNPQSNLIVSGSFDESVRI 137
+ S S D T+KIW ++ + + +Y + C F+ S I++ + V +
Sbjct: 1665 IASSSWDGTIKIWNPFDTIAKDRLKHVIDASLSYGSIKSCKFSANSKQILATTMKNDVLL 1724
Query: 138 WDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 197
+DV + K + + HS V+ + DG+ IV+ S D ++W + G L + +
Sbjct: 1725 FDVNSQKLISVMGNHSKSVNHCSLSNDGNYIVTGSDDATAKVWSSTLGTQLTNFLIPGDC 1784
Query: 198 PVSFVKFSPNGKYILAATLDNTLKLWD 224
+ + FSP + D T++L+D
Sbjct: 1785 WANCLAFSPTQPLLAVGATDCTVRLFD 1811
Score = 195 (73.7 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 46/155 (29%), Positives = 73/155 (47%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L F L GHT V+ FSP+ + L S D +++W K + GH I ++
Sbjct: 1948 LLFRLKGHTDWVNFCTFSPDSKKLVSGGWDFNLRVWNIKTQKELLCLKGHSSSIEKAFFT 2007
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
D + ++S S D ++K+W+ G + +L+ + + + S I S S D ++ W
Sbjct: 2008 KDQKYIISASFDGSVKVWDAQFGSEITSLRHQTRISDVVSSSDASGRIFSSSDDGIIKSW 2067
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY 173
G CL TL HS P+ V FN + SSS+
Sbjct: 2068 YPVAGSCLATLTGHSGPIKQVQFNPNSGGGGSSSF 2102
Score = 186 (70.5 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 54/216 (25%), Positives = 103/216 (47%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS-SD 80
TL GH+ +S FS +G+ LASSS D + +W G H ++ +S +
Sbjct: 1559 TLVGHSNWISCFSFSDDGKTLASSSWDNTVIVWDLIVGNQIHQFKDHSRAVNYCEFSPTA 1618
Query: 81 SRLLVSGSDDKTLKIWELSSGKCLKTLKG-HSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
+ LL+S + D ++ I+ S + + HS V C ++P LI S S+D +++IW+
Sbjct: 1619 NNLLMSCAWDSSIIIFNTSDKNIFRNFRSAHSKPVNSCCWSPDGTLIASSSWDGTIKIWN 1678
Query: 140 ----VRTGKCLKTLPAHSD--PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 193
+ + + A + + F+ + I++++ ++D S Q L +++
Sbjct: 1679 PFDTIAKDRLKHVIDASLSYGSIKSCKFSANSKQILATTMKNDVLLFDVNS-QKLISVMG 1737
Query: 194 DDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVT 229
+ + V+ S +G YI+ + D T K+W S + T
Sbjct: 1738 NHSKSVNHCSLSNDGNYIVTGSDDATAKVWSSTLGT 1773
Score = 144 (55.7 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 34/126 (26%), Positives = 58/126 (46%)
Query: 103 CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFN 162
C +T+ G + C ++ ++I S D + I+ G L TL HS+ +S F+
Sbjct: 1514 CKQTITGLEDGATACCYSRDGSMIASAGKDSIIHIFKASNGSELLTLVGHSNWISCFSFS 1573
Query: 163 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 222
DG + SSS+D +WD G + D + V++ +FSP +L +
Sbjct: 1574 DDGKTLASSSWDNTVIVWDLIVGNQIHQF-KDHSRAVNYCEFSPTANNLLMSCA------ 1626
Query: 223 WDSKVV 228
WDS ++
Sbjct: 1627 WDSSII 1632
Score = 127 (49.8 bits), Expect = 0.00011, P = 0.00011
Identities = 37/138 (26%), Positives = 74/138 (53%)
Query: 30 VSSVKFSPNGEWLASSSADKLIKIWGAYDGK--FEKTISGHKLGISDVAWSSDSRLLVSG 87
V SV+FS +G+ LA+ S K +KI+ + K +T S + ++ +++S + + L G
Sbjct: 2281 VESVEFSTSGDLLAAGSRTKQVKIFSPLNDKPVTHQTSSSY---VTSLSFSPNDKYLAIG 2337
Query: 88 SDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLK 147
+ D T+++ +++SGK + L + + F + L VS S D S+ +W+ T ++
Sbjct: 2338 TFDGTVELLDIASGKLRRILTTQVSSITSLKFLDSTRL-VSVSNDRSLIVWNFSTSS-IE 2395
Query: 148 TLPAHSDPVSA--VHFNR 163
H P+++ +H N+
Sbjct: 2396 NEFIHQSPITSMDIHQNQ 2413
Score = 124 (48.7 bits), Expect = 0.00024, P = 0.00024
Identities = 31/110 (28%), Positives = 58/110 (52%)
Query: 72 ISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 131
+ V +S+ LL +GS K +KI+ + K + T + S+YV +F+P + G+F
Sbjct: 2281 VESVEFSTSGDLLAAGSRTKQVKIFSPLNDKPV-THQTSSSYVTSLSFSPNDKYLAIGTF 2339
Query: 132 DESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181
D +V + D+ +GK + L ++++ F D + +VS S D +W+
Sbjct: 2340 DGTVELLDIASGKLRRILTTQVSSITSLKF-LDSTRLVSVSNDRSLIVWN 2388
Score = 123 (48.4 bits), Expect = 0.00031, P = 0.00031
Identities = 49/212 (23%), Positives = 94/212 (44%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGA---YDGK---FEKTISGHKLGISDV 75
T + H +++ FS +G+++A+ D ++ IW A + K FE ++ S V
Sbjct: 2140 TTSAHKGSINQCVFSKDGKYVATCGQDCVLNIWDAKTHINLKTMIFESPVTTCSFNRSGV 2199
Query: 76 AWSS--DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSGSFD 132
+ D L V D KT+ E ++GK ++ H + +P +L ++
Sbjct: 2200 LFIGLQDGTLEVYSKDWKTVLHKEKTNGKITRS-SAHPSLNIQSTESPDYIDLFAFSTWT 2258
Query: 133 ESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLI 192
V + + + K + + D V +V F+ G L+ + S +I+ + + +
Sbjct: 2259 NCVNLLNC-SEKYFDPIVSFDDWVESVEFSTSGDLLAAGSRTKQVKIFSPLNDKPVTH-- 2315
Query: 193 DDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
+ V+ + FSPN KY+ T D T++L D
Sbjct: 2316 QTSSSYVTSLSFSPNDKYLAIGTFDGTVELLD 2347
Score = 37 (18.1 bits), Expect = 1.1e-24, Sum P(2) = 1.1e-24
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 211 ILAATLDNTLKLWDSKVVT 229
I +++ D T+KLW+ T
Sbjct: 2120 IASSSDDGTVKLWEFNSAT 2138
>POMBASE|SPAC18B11.10 [details] [associations]
symbol:tup11 "transcriptional corepressor Tup11"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=IEP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC18B11.10 GO:GO:0005829 GO:GO:0003714
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 EMBL:AB027768 PIR:S58306
RefSeq:NP_592873.1 ProteinModelPortal:Q09715 STRING:Q09715
EnsemblFungi:SPAC18B11.10.1 GeneID:2542299 KEGG:spo:SPAC18B11.10
HOGENOM:HOG000200558 KO:K06666 OMA:KPRENEN OrthoDB:EOG4KM2C2
NextBio:20803361 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
Uniprot:Q09715
Length = 614
Score = 289 (106.8 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 64/205 (31%), Positives = 110/205 (53%)
Query: 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK--F----EKTISGHKLGISDVAWSS 79
H V VKFS NG++LA+ ++ ++ GK F E L + +A+S
Sbjct: 312 HPSVVCCVKFSNNGKYLATG-CNQAANVFDVQTGKKLFTLHEESPDPSRDLYVRTIAFSP 370
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
D + LV+G++D+ +K+W+LS+ K GH ++ +F+ IVSGS D + R+WD
Sbjct: 371 DGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWD 430
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
V TG+C+ L + V+A+ + + I S D + R+W + SG ++ L + V
Sbjct: 431 VETGQCILKLEIENG-VTAIAISPNDQFIAVGSLDQIIRVW-SVSGTLVERL-EGHKESV 487
Query: 200 SFVKFSPNGKYILAATLDNTLKLWD 224
+ FSP+ +L+ +LD T+K+W+
Sbjct: 488 YSIAFSPDSSILLSGSLDKTIKVWE 512
Score = 277 (102.6 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 62/217 (28%), Positives = 114/217 (52%)
Query: 30 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSD 89
V ++ FSP+G++L + + D+ IK+W K SGH+ I + +S + R +VSGS
Sbjct: 363 VRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSG 422
Query: 90 DKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTL 149
D+T ++W++ +G+C+ L+ N V +P I GS D+ +R+W V +G ++ L
Sbjct: 423 DRTARLWDVETGQCILKLE-IENGVTAIAISPNDQFIAVGSLDQIIRVWSV-SGTLVERL 480
Query: 150 PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD---TAS---------GQCLKTLIDDDNP 197
H + V ++ F+ D S+++S S D ++W+ T S G C T +
Sbjct: 481 EGHKESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHTDF 540
Query: 198 PVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIIC 234
+S V SP+ ++ L+ + D +++ WD + + C
Sbjct: 541 VLS-VAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTC 576
Score = 272 (100.8 bits), Expect = 8.1e-23, P = 8.1e-23
Identities = 61/169 (36%), Positives = 94/169 (55%)
Query: 30 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSD 89
V+++ SPN +++A S D++I++W G + + GHK + +A+S DS +L+SGS
Sbjct: 446 VTAIAISPNDQFIAVGSLDQIIRVWSV-SGTLVERLEGHKESVYSIAFSPDSSILLSGSL 504
Query: 90 DKTLKIWELSS------------GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 137
DKT+K+WEL + G C T GH+++V +P S +SGS D S++
Sbjct: 505 DKTIKVWELQATRSVGLSAIKPEGICKATYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQF 564
Query: 138 WDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW--DTAS 184
WD++TG+ T H + V +V F+ DG S S D RIW D AS
Sbjct: 565 WDLQTGQSYLTCQGHKNSVISVCFSPDGRQFASGSGDLRARIWSIDPAS 613
Score = 198 (74.8 bits), Expect = 8.0e-15, P = 8.0e-15
Identities = 47/130 (36%), Positives = 67/130 (51%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY------------DGKFEKTISGHKL 70
L GH ++V S+ FSP+ L S S DK IK+W +G + T +GH
Sbjct: 480 LEGHKESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHTD 539
Query: 71 GISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 130
+ VA S DSR +SGS D++++ W+L +G+ T +GH N V F+P SGS
Sbjct: 540 FVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDGRQFASGS 599
Query: 131 FDESVRIWDV 140
D RIW +
Sbjct: 600 GDLRARIWSI 609
Score = 146 (56.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 30/81 (37%), Positives = 40/81 (49%)
Query: 18 VLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW 77
+ K T GHT V SV SP+ W S S D+ ++ W G+ T GHK + V +
Sbjct: 529 ICKATYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCF 588
Query: 78 SSDSRLLVSGSDDKTLKIWEL 98
S D R SGS D +IW +
Sbjct: 589 SPDGRQFASGSGDLRARIWSI 609
>MGI|MGI:1336172 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0003714 "transcription corepressor
activity" evidence=ISO;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0005876 "spindle
microtubule" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0006508 "proteolysis" evidence=ISO] [GO:0007605 "sensory
perception of sound" evidence=ISO] [GO:0008013 "beta-catenin
binding" evidence=ISO] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0017053 "transcriptional repressor complex"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0043627 "response to estrogen stimulus"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO;IDA] [GO:0045444 "fat cell differentiation"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IMP] [GO:0048545 "response to steroid hormone
stimulus" evidence=IMP] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:1336172 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0003682 GO:GO:0005667 GO:GO:0044212 GO:GO:0043627
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045444
GeneTree:ENSGT00690000102024 KO:K04508 HOGENOM:HOG000220902
OrthoDB:EOG412M5M CTD:6907 EMBL:AK030547 EMBL:AK031937
EMBL:AK038674 EMBL:BC043105 EMBL:F38006 IPI:IPI00223056
RefSeq:NP_065626.1 UniGene:Mm.258476 ProteinModelPortal:Q9QXE7
SMR:Q9QXE7 STRING:Q9QXE7 PhosphoSite:Q9QXE7 PaxDb:Q9QXE7
PRIDE:Q9QXE7 Ensembl:ENSMUST00000088217 GeneID:21372 KEGG:mmu:21372
InParanoid:Q9QXE7 NextBio:300588 Bgee:Q9QXE7 CleanEx:MM_TBL1X
Genevestigator:Q9QXE7 GermOnline:ENSMUSG00000025246 Uniprot:Q9QXE7
Length = 527
Score = 287 (106.1 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 61/217 (28%), Positives = 110/217 (50%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L TL H + ++K++ G ++ S+ DK IW A+ G+ ++ H DV W
Sbjct: 271 LASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ 330
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
+++ S S D + + L + +KT +GH+N V ++P L+ S S D +++IW
Sbjct: 331 NNTTF-ASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIW 389
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGS---------LIVSSSYDGLCRIWDTASGQCLK 189
++ C+ L AHS + + ++ G ++ S+S+D R+WD G C+
Sbjct: 390 SMKQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDVERGVCIH 449
Query: 190 TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSK 226
TL P S V FSP+GKY+ + + D + +W+++
Sbjct: 450 TLTKHQEPVYS-VAFSPDGKYLASGSFDKCVHIWNTQ 485
Score = 271 (100.5 bits), Expect = 6.7e-23, P = 6.7e-23
Identities = 58/157 (36%), Positives = 81/157 (51%)
Query: 38 NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWE 97
N AS S D I + + KT GH ++ + W LL S SDD TLKIW
Sbjct: 331 NNTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWS 390
Query: 98 LSSGKCLKTLKGHSNYVFCCNF--------NPQSNLIV-SGSFDESVRIWDVRTGKCLKT 148
+ C+ L+ HS ++ + NP SN+++ S SFD +VR+WDV G C+ T
Sbjct: 391 MKQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDVERGVCIHT 450
Query: 149 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 185
L H +PV +V F+ DG + S S+D IW+T SG
Sbjct: 451 LTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSG 487
Score = 225 (84.3 bits), Expect = 7.1e-18, P = 7.1e-18
Identities = 61/218 (27%), Positives = 98/218 (44%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD----GKFEKTI------SGHKL-- 70
L GH V ++P + LAS S D +IW + G + + GH +
Sbjct: 178 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPS 237
Query: 71 --GISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVS 128
++ + W+SD LL +GS D +IW G TL H +F +N + N I+S
Sbjct: 238 NKDVTSLDWNSDGTLLATGSYDGFARIWT-EDGNLASTLGQHKGPIFALKWNKKGNYILS 296
Query: 129 GSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCL 188
D++ IWD TG+ + P HS P V + ++ + S S D + + +
Sbjct: 297 AGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDW-QNNTTFASCSTDMCIHVCRLGCDRPV 355
Query: 189 KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSK 226
KT N V+ +K+ P+G + + + D TLK+W K
Sbjct: 356 KTFQGHTNE-VNAIKWDPSGMLLASCSDDMTLKIWSMK 392
Score = 222 (83.2 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 50/166 (30%), Positives = 83/166 (50%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS--- 78
T GHT V+++K+ P+G LAS S D +KIW + H I + WS
Sbjct: 357 TFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTG 416
Query: 79 ------SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 132
+ + +L S S D T+++W++ G C+ TL H V+ F+P + SGSFD
Sbjct: 417 PATSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFD 476
Query: 133 ESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LC 177
+ V IW+ ++G + + + + V +N G + +S+ DG +C
Sbjct: 477 KCVHIWNTQSGSLVHSYRG-TGGIFEVCWNARGDKVGASASDGSVC 521
Score = 154 (59.3 bits), Expect = 8.4e-09, P = 8.4e-09
Identities = 38/128 (29%), Positives = 65/128 (50%)
Query: 23 LAGHTKAVSSVKFSPNGE---------WLASSSADKLIKIWGAYDGKFEKTISGHKLGIS 73
L H+K + ++K+SP G LAS+S D +++W G T++ H+ +
Sbjct: 400 LQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVY 459
Query: 74 DVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 133
VA+S D + L SGS DK + IW SG + + +G C +N + + + + + D
Sbjct: 460 SVAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYRGTGGIFEVC-WNARGDKVGASASDG 518
Query: 134 SVRIWDVR 141
SV + D+R
Sbjct: 519 SVCVLDLR 526
>RGD|1563868 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0003714 "transcription corepressor activity"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005667 "transcription
factor complex" evidence=IEA;ISO] [GO:0005876 "spindle microtubule"
evidence=ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0007605 "sensory perception of sound"
evidence=ISO] [GO:0008013 "beta-catenin binding" evidence=ISO]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0019904 "protein domain
specific binding" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA;ISO] [GO:0043627 "response to
estrogen stimulus" evidence=IEA;ISO] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA;ISO] [GO:0045444 "fat
cell differentiation" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048545
"response to steroid hormone stimulus" evidence=ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISO]
[GO:0000118 "histone deacetylase complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:1563868
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
KO:K04508 EMBL:CH473966 CTD:6907 RefSeq:NP_001100434.1
UniGene:Rn.107002 SMR:G3V6G5 Ensembl:ENSRNOT00000004901
GeneID:302711 KEGG:rno:302711 NextBio:650027 Uniprot:G3V6G5
Length = 527
Score = 287 (106.1 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 61/217 (28%), Positives = 110/217 (50%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L TL H + ++K++ G ++ S+ DK IW A+ G+ ++ H DV W
Sbjct: 271 LASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ 330
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
+++ S S D + + L + +KT +GH+N V ++P L+ S S D +++IW
Sbjct: 331 NNTTF-ASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIW 389
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGS---------LIVSSSYDGLCRIWDTASGQCLK 189
++ C+ L AHS + + ++ G ++ S+S+D R+WD G C+
Sbjct: 390 SMKQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDVERGVCIH 449
Query: 190 TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSK 226
TL P S V FSP+GKY+ + + D + +W+++
Sbjct: 450 TLTKHQEPVYS-VAFSPDGKYLASGSFDKCVHIWNTQ 485
Score = 271 (100.5 bits), Expect = 6.7e-23, P = 6.7e-23
Identities = 58/157 (36%), Positives = 81/157 (51%)
Query: 38 NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWE 97
N AS S D I + + KT GH ++ + W LL S SDD TLKIW
Sbjct: 331 NNTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWS 390
Query: 98 LSSGKCLKTLKGHSNYVFCCNF--------NPQSNLIV-SGSFDESVRIWDVRTGKCLKT 148
+ C+ L+ HS ++ + NP SN+++ S SFD +VR+WDV G C+ T
Sbjct: 391 MKQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDVERGVCIHT 450
Query: 149 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 185
L H +PV +V F+ DG + S S+D IW+T SG
Sbjct: 451 LTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSG 487
Score = 225 (84.3 bits), Expect = 7.1e-18, P = 7.1e-18
Identities = 61/218 (27%), Positives = 98/218 (44%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD----GKFEKTI------SGHKL-- 70
L GH V ++P + LAS S D +IW + G + + GH +
Sbjct: 178 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPS 237
Query: 71 --GISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVS 128
++ + W+SD LL +GS D +IW G TL H +F +N + N I+S
Sbjct: 238 NKDVTSLDWNSDGTLLATGSYDGFARIWT-EDGNLASTLGQHKGPIFALKWNKKGNYILS 296
Query: 129 GSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCL 188
D++ IWD TG+ + P HS P V + ++ + S S D + + +
Sbjct: 297 AGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDW-QNNTTFASCSTDMCIHVCRLGCDRPV 355
Query: 189 KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSK 226
KT N V+ +K+ P+G + + + D TLK+W K
Sbjct: 356 KTFQGHTNE-VNAIKWDPSGMLLASCSDDMTLKIWSMK 392
Score = 222 (83.2 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 50/166 (30%), Positives = 83/166 (50%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS--- 78
T GHT V+++K+ P+G LAS S D +KIW + H I + WS
Sbjct: 357 TFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTG 416
Query: 79 ------SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 132
+ + +L S S D T+++W++ G C+ TL H V+ F+P + SGSFD
Sbjct: 417 PATSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFD 476
Query: 133 ESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LC 177
+ V IW+ ++G + + + + V +N G + +S+ DG +C
Sbjct: 477 KCVHIWNTQSGSLVHSYRG-TGGIFEVCWNARGDKVGASASDGSVC 521
Score = 154 (59.3 bits), Expect = 8.4e-09, P = 8.4e-09
Identities = 38/128 (29%), Positives = 65/128 (50%)
Query: 23 LAGHTKAVSSVKFSPNGE---------WLASSSADKLIKIWGAYDGKFEKTISGHKLGIS 73
L H+K + ++K+SP G LAS+S D +++W G T++ H+ +
Sbjct: 400 LQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVY 459
Query: 74 DVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 133
VA+S D + L SGS DK + IW SG + + +G C +N + + + + + D
Sbjct: 460 SVAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYRGTGGIFEVC-WNARGDKVGASASDG 518
Query: 134 SVRIWDVR 141
SV + D+R
Sbjct: 519 SVCVLDLR 526
>FB|FBgn0023423 [details] [associations]
symbol:slmb "supernumerary limbs" species:7227 "Drosophila
melanogaster" [GO:0045879 "negative regulation of smoothened
signaling pathway" evidence=IMP] [GO:0030111 "regulation of Wnt
receptor signaling pathway" evidence=IMP;TAS] [GO:0008588 "release
of cytoplasmic sequestered NF-kappaB" evidence=IMP;TAS] [GO:0008589
"regulation of smoothened signaling pathway" evidence=TAS]
[GO:0000151 "ubiquitin ligase complex" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0030512
"negative regulation of transforming growth factor beta receptor
signaling pathway" evidence=NAS] [GO:0030178 "negative regulation
of Wnt receptor signaling pathway" evidence=IMP;NAS] [GO:0019005
"SCF ubiquitin ligase complex" evidence=NAS;TAS] [GO:0006508
"proteolysis" evidence=IMP] [GO:0045475 "locomotor rhythm"
evidence=IMP] [GO:0007623 "circadian rhythm" evidence=IMP;IPI]
[GO:0007611 "learning or memory" evidence=IMP] [GO:0008355
"olfactory learning" evidence=IMP] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0030708 "germarium-derived female
germ-line cyst encapsulation" evidence=IMP] [GO:0046843 "dorsal
appendage formation" evidence=IMP] [GO:0030720 "oocyte localization
involved in germarium-derived egg chamber formation" evidence=IMP]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0030727
"germarium-derived female germ-line cyst formation" evidence=IMP]
[GO:0045849 "negative regulation of nurse cell apoptotic process"
evidence=IMP] [GO:0030707 "ovarian follicle cell development"
evidence=IMP] [GO:0007293 "germarium-derived egg chamber formation"
evidence=IMP] [GO:0030713 "ovarian follicle cell stalk formation"
evidence=IMP] [GO:0007304 "chorion-containing eggshell formation"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0007298 "border follicle cell migration" evidence=IMP]
[GO:0046599 "regulation of centriole replication" evidence=IDA]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 SMART:SM01028 GO:GO:0007088
GO:GO:0008355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 GO:GO:0006508 SUPFAM:SSF81383 GO:GO:0007298
GO:GO:0045475 GO:GO:0019005 GO:GO:0004842 GO:GO:0030178
GO:GO:0046843 GO:GO:0030720 GO:GO:0030713 GO:GO:0030512
GO:GO:0030727 GO:GO:0030708 GO:GO:0008588 GO:GO:0045879
GO:GO:0046599 HSSP:Q9Y297 GO:GO:0060253 EMBL:AF032878
ProteinModelPortal:O44382 SMR:O44382 IntAct:O44382 STRING:O44382
PaxDb:O44382 PRIDE:O44382 FlyBase:FBgn0023423 HOGENOM:HOG000102803
InParanoid:O44382 OrthoDB:EOG4S7H55 ArrayExpress:O44382 Bgee:O44382
GO:GO:0045849 Uniprot:O44382
Length = 510
Score = 286 (105.7 bits), Expect = 1.3e-24, P = 1.3e-24
Identities = 70/221 (31%), Positives = 117/221 (52%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK---FEKTISGHKLGISDVAWS 78
TL H +AV ++F+ NG + + S D+ I +W + + GH+ ++ V +
Sbjct: 285 TLIHHCEAVLHLRFN-NG-MMVTCSKDRSIAVWDMTSPSEITLRRVLVGHRAAVNVVDF- 341
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
D + +VS S D+T+K+W S+ + ++TL GH + C + + L+VSGS D S+R+W
Sbjct: 342 -DEKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNSIRLW 398
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD--------TASGQ-CLK 189
D+ G CL+ L H + V + F D IVS +YDG ++WD AS CL
Sbjct: 399 DIECGACLRVLEGHEELVRCIRF--DTKRIVSGAYDGKIKVWDLVAALDPRAASNTLCLN 456
Query: 190 TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTP 230
TL++ V ++F I++++ D+T+ +WD TP
Sbjct: 457 TLVEHTGR-VFRLQFDEF--QIVSSSHDDTILIWDFLNFTP 494
Score = 279 (103.3 bits), Expect = 7.9e-24, P = 7.9e-24
Identities = 63/172 (36%), Positives = 98/172 (56%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L+ L GH AV+ V F +++ S+S D+ IK+W +F +T++GHK GI+ + +
Sbjct: 325 LRRVLVGHRAAVNVVDFDE--KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR 382
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
RL+VSGS D ++++W++ G CL+ L+GH V C F+ + IVSG++D +++W
Sbjct: 383 D--RLVVSGSSDNSIRLWDIECGACLRVLEGHEELVRCIRFDTKR--IVSGAYDGKIKVW 438
Query: 139 DV------RTGK---CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181
D+ R CL TL H+ V + F D IVSSS+D IWD
Sbjct: 439 DLVAALDPRAASNTLCLNTLVEHTGRVFRLQF--DEFQIVSSSHDDTILIWD 488
Score = 242 (90.2 bits), Expect = 9.1e-20, P = 9.1e-20
Identities = 53/148 (35%), Positives = 85/148 (57%)
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
D +VSG D T+KIW+ + +C+KTL GH+ V C ++ + +I+SGS D +VR+WD
Sbjct: 219 DDGKIVSGLRDNTIKIWDRTDLQCVKTLMGHTGSVLCLQYDDK--VIISGSSDSTVRVWD 276
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ--CLKTLIDDDNP 197
V TG+ + TL H + V + FN ++V+ S D +WD S L+ ++
Sbjct: 277 VNTGEMVNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMTSPSEITLRRVLVGHRA 334
Query: 198 PVSFVKFSPNGKYILAATLDNTLKLWDS 225
V+ V F KYI++A+ D T+K+W +
Sbjct: 335 AVNVVDFDE--KYIVSASGDRTIKVWST 360
Score = 229 (85.7 bits), Expect = 2.4e-18, P = 2.4e-18
Identities = 59/223 (26%), Positives = 113/223 (50%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GHT +V +++ + + + S S+D +++W G+ T+ H + + +++
Sbjct: 245 TLMGHTGSVLCLQY--DDKVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFNNG- 301
Query: 82 RLLVSGSDDKTLKIWELSSGKCL---KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
++V+ S D+++ +W+++S + + L GH V +F+ + IVS S D ++++W
Sbjct: 302 -MMVTCSKDRSIAVWDMTSPSEITLRRVLVGHRAAVNVVDFDEK--YIVSASGDRTIKVW 358
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 198
T + ++TL H ++ + + RD L+VS S D R+WD G CL+ L +
Sbjct: 359 STSTCEFVRTLNGHKRGIACLQY-RD-RLVVSGSSDNSIRLWDIECGACLRVL-EGHEEL 415
Query: 199 VSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTPLNLN 241
V ++F K I++ D +K+WD S L LN
Sbjct: 416 VRCIRFDT--KRIVSGAYDGKIKVWDLVAALDPRAASNTLCLN 456
Score = 227 (85.0 bits), Expect = 3.9e-18, P = 3.9e-18
Identities = 56/202 (27%), Positives = 113/202 (55%)
Query: 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV 85
++K V +++ +G+ + S D IKIW D + KT+ GH G S + D ++++
Sbjct: 209 NSKGVYCLQYD-DGK-IVSGLRDNTIKIWDRTDLQCVKTLMGHT-G-SVLCLQYDDKVII 264
Query: 86 SGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 145
SGS D T+++W++++G+ + TL H V FN + ++V+ S D S+ +WD+ +
Sbjct: 265 SGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMTSPSE 322
Query: 146 L---KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 202
+ + L H V+ V F D IVS+S D ++W T++ + ++TL + ++ +
Sbjct: 323 ITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWSTSTCEFVRTL-NGHKRGIACL 379
Query: 203 KFSPNGKYILAATLDNTLKLWD 224
++ + +++ + DN+++LWD
Sbjct: 380 QY--RDRLVVSGSSDNSIRLWD 399
>UNIPROTKB|E1BQV9 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00594543
ProteinModelPortal:E1BQV9 Ensembl:ENSGALT00000001552
ArrayExpress:E1BQV9 Uniprot:E1BQV9
Length = 660
Score = 289 (106.8 bits), Expect = 1.4e-24, P = 1.4e-24
Identities = 57/204 (27%), Positives = 109/204 (53%)
Query: 23 LAGHTKAVSSVKFSPN-GEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
+ H+ VSS+ + G LA+ D + +W + + ++GH I + S+
Sbjct: 16 IVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVAQLRHD-LLTGHTTPIESLQISAKE 74
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
L+V+GS ++++W+L + K L+TL GH + +F+P + + SGS D +++WDVR
Sbjct: 75 ELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVR 134
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 201
C+ +H+ V + F+ DG + S++ D ++WD +G+ + P V+
Sbjct: 135 RKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHYGP-VNV 193
Query: 202 VKFSPNGKYILAATLDN-TLKLWD 224
V+F P+ +Y+LA+ + T++ WD
Sbjct: 194 VEFHPSIEYLLASGSSSMTIRFWD 217
Score = 253 (94.1 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 53/187 (28%), Positives = 90/187 (48%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
L GHT + S++ S E + + S I++W K +T+ GHK I + +
Sbjct: 58 LTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGS 117
Query: 83 LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 142
+ SGS D +K+W++ C+ K H+ V C F+P + S + D +V++WD+
Sbjct: 118 FVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTA 177
Query: 143 GKCLKTLPAHSDPVSAVHFNRDGS-LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 201
GK + H PV+ V F+ L+ S S R WD + + I+++ PV
Sbjct: 178 GKVMFEFTGHYGPVNVVEFHPSIEYLLASGSSSMTIRFWDLEKFHVV-SCIEEEATPVRC 236
Query: 202 VKFSPNG 208
+ F+P+G
Sbjct: 237 ILFNPDG 243
Score = 224 (83.9 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 53/173 (30%), Positives = 84/173 (48%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY-DGKFEKTISGHKLGISDVAWSSD 80
TL GH + S+ F P G ++AS S D IK+W G K S H + + +S D
Sbjct: 99 TLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKS-HTQAVRCLRFSPD 157
Query: 81 SRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWD 139
+ L S +DD T+K+W+L++GK + GH V F+P L+ SGS ++R WD
Sbjct: 158 GKWLASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFHPSIEYLLASGSSSMTIRFWD 217
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLI 192
+ + + + PV + FN DG + D L R++ +C ++
Sbjct: 218 LEKFHVVSCIEEEATPVRCILFNPDGCCLYGGFQDSL-RVYGWEPERCFDVVV 269
Score = 185 (70.2 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 40/126 (31%), Positives = 66/126 (52%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS-S 79
F HT+AV ++FSP+G+WLAS++ D +K+W GK +GH ++ V + S
Sbjct: 140 FKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFHPS 199
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
LL SGS T++ W+L + ++ + V C FNP + G F +S+R++
Sbjct: 200 IEYLLASGSSSMTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLYGG-FQDSLRVYG 258
Query: 140 VRTGKC 145
+C
Sbjct: 259 WEPERC 264
>UNIPROTKB|F1NYZ8 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0008013 "beta-catenin
binding" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0047485 "protein N-terminus binding" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 EMBL:AADN02020878
EMBL:AADN02020879 EMBL:AADN02020880 EMBL:AADN02020881
EMBL:AADN02020882 EMBL:AADN02020883 EMBL:AADN02020884
EMBL:AADN02020885 EMBL:AADN02020886 EMBL:AADN02020887
EMBL:AADN02020888 EMBL:AADN02020889 EMBL:AADN02020890
EMBL:AADN02020891 EMBL:AADN02020892 EMBL:AADN02020893
EMBL:AADN02020894 EMBL:AADN02020895 EMBL:AADN02020896
EMBL:AADN02020897 EMBL:AADN02020898 IPI:IPI00594570
Ensembl:ENSGALT00000001912 ArrayExpress:F1NYZ8 Uniprot:F1NYZ8
Length = 517
Score = 286 (105.7 bits), Expect = 1.4e-24, P = 1.4e-24
Identities = 65/229 (28%), Positives = 119/229 (51%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L TL H + ++K++ G ++ S+ DK IW A+ G+ ++ H DV W
Sbjct: 258 LASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ 317
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
S++ S S D + + +L + +KT +GH+N V ++P NL+ S S D +++IW
Sbjct: 318 SNNTF-ASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIW 376
Query: 139 DVRTGKCLKTLPAHSDPVSAVHF--------NRDGSLIVSS----SYDGLCRIWDTASGQ 186
++ C+ L AH+ + + + N + +L+++S S+D R+WD G
Sbjct: 377 SMKQDSCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASLDSASFDSTVRLWDVDRGI 436
Query: 187 CLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICS 235
C+ TL P S V FSP+G+Y+ + + D + +W+++ T A++ S
Sbjct: 437 CIHTLTKHQEPVYS-VAFSPDGRYLASGSFDKCVHIWNTQ--TGALVHS 482
Score = 217 (81.4 bits), Expect = 5.0e-17, P = 5.0e-17
Identities = 61/218 (27%), Positives = 94/218 (43%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE---KTISGHKL--GISDVA- 76
L GH V ++P + LAS S D +IW + + + H + G DV
Sbjct: 165 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPS 224
Query: 77 --------WSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVS 128
W+S+ LL +GS D +IW G TL H +F +N + N I+S
Sbjct: 225 NKDVTSLDWNSEGTLLATGSYDGFARIWT-KDGNLASTLGQHKGPIFALKWNKKGNFILS 283
Query: 129 GSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCL 188
D++ IWD TG+ + P HS P V + + + S S D + + +
Sbjct: 284 AGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTF-ASCSTDMCIHVCKLGQDRPI 342
Query: 189 KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSK 226
KT N V+ +K+ P G + + + D TLK+W K
Sbjct: 343 KTFQGHTNE-VNAIKWDPTGNLLASCSDDMTLKIWSMK 379
Score = 216 (81.1 bits), Expect = 6.4e-17, P = 6.4e-17
Identities = 50/169 (29%), Positives = 83/169 (49%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS-- 79
T GHT V+++K+ P G LAS S D +KIW + H I + WS
Sbjct: 344 TFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDSCVHDLQAHNKEIYTIKWSPTG 403
Query: 80 ------DSRLLVSGSD----DKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 129
++ L+++ D D T+++W++ G C+ TL H V+ F+P + SG
Sbjct: 404 PGTNNPNANLMLASLDSASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASG 463
Query: 130 SFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LC 177
SFD+ V IW+ +TG + + + + V +N G + +S+ DG +C
Sbjct: 464 SFDKCVHIWNTQTGALVHSYRG-TGGIFEVCWNAAGDKVGASASDGSVC 511
Score = 135 (52.6 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 37/131 (28%), Positives = 62/131 (47%)
Query: 23 LAGHTKAVSSVKFSPNGEW------------LASSSADKLIKIWGAYDGKFEKTISGHKL 70
L H K + ++K+SP G L S+S D +++W G T++ H+
Sbjct: 387 LQAHNKEIYTIKWSPTGPGTNNPNANLMLASLDSASFDSTVRLWDVDRGICIHTLTKHQE 446
Query: 71 GISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 130
+ VA+S D R L SGS DK + IW +G + + +G C +N + + + +
Sbjct: 447 PVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRGTGGIFEVC-WNAAGDKVGASA 505
Query: 131 FDESVRIWDVR 141
D SV + D+R
Sbjct: 506 SDGSVCVLDLR 516
>MGI|MGI:1338871 [details] [associations]
symbol:Btrc "beta-transducin repeat containing protein"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008013 "beta-catenin binding"
evidence=IDA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0031648
"protein destabilization" evidence=ISO] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IMP]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IDA] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IMP] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IMP] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IDA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
UniPathway:UPA00143 MGI:MGI:1338871 GO:GO:0005829 GO:GO:0005634
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH466534 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511
GO:GO:0019005 GO:GO:0004842 GO:GO:0045862 GO:GO:0008013
GO:GO:0000209 GO:GO:0071407 GO:GO:0045309 Reactome:REACT_109335
Reactome:REACT_24972 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OMA:NAYLKPM
OrthoDB:EOG4F1X2M EMBL:AF099932 EMBL:AF110396 EMBL:AF112979
EMBL:AF081887 EMBL:AF391190 EMBL:AF391178 EMBL:AF391179
EMBL:AF391180 EMBL:AF391181 EMBL:AF391182 EMBL:AF391183
EMBL:AF391184 EMBL:AF391185 EMBL:AF391186 EMBL:AF391187
EMBL:AF391188 EMBL:AF391189 EMBL:AK145624 EMBL:AK156660
EMBL:AK220183 EMBL:BC003989 IPI:IPI00402788 IPI:IPI00877195
RefSeq:NP_001032847.2 RefSeq:NP_033901.1 UniGene:Mm.119717
UniGene:Mm.446448 HSSP:Q9Y297 ProteinModelPortal:Q3ULA2 SMR:Q3ULA2
IntAct:Q3ULA2 STRING:Q3ULA2 PhosphoSite:Q3ULA2
Ensembl:ENSMUST00000065601 Ensembl:ENSMUST00000111936 GeneID:12234
KEGG:mmu:12234 UCSC:uc008hqy.2 UCSC:uc008hqz.2
GeneTree:ENSGT00690000101849 InParanoid:Q571K6 NextBio:280656
Bgee:Q3ULA2 Genevestigator:Q3ULA2 Uniprot:Q3ULA2
Length = 605
Score = 288 (106.4 bits), Expect = 1.4e-24, P = 1.4e-24
Identities = 64/172 (37%), Positives = 99/172 (57%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L+ L GH AV+ V F + +++ S+S D+ IK+W +F +T++GHK GI+ + +
Sbjct: 418 LRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR 475
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
RL+VSGS D T+++W++ G CL+ L+GH V C F+ + IVSG++D +++W
Sbjct: 476 D--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVW 531
Query: 139 DVRTGK---------CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181
D+ CL+TL HS V + F D IVSSS+D IWD
Sbjct: 532 DLMAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWD 581
Score = 287 (106.1 bits), Expect = 1.8e-24, P = 1.8e-24
Identities = 67/215 (31%), Positives = 116/215 (53%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW---GAYDGKFEKTISGHKLGISDVAWS 78
TL H +AV ++F+ NG + + S D+ I +W D + + GH+ ++ V +
Sbjct: 378 TLIHHCEAVLHLRFN-NG-MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF- 434
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
D + +VS S D+T+K+W S+ + ++TL GH + C + + L+VSGS D ++R+W
Sbjct: 435 -DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLW 491
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT---------ASGQCLK 189
D+ G CL+ L H + V + F D IVS +YDG ++WD A CL+
Sbjct: 492 DIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLMAALDPRAPAGTLCLR 549
Query: 190 TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
TL++ V ++F I++++ D+T+ +WD
Sbjct: 550 TLVEHSGR-VFRLQFDEF--QIVSSSHDDTILIWD 581
Score = 237 (88.5 bits), Expect = 4.8e-19, P = 4.8e-19
Identities = 52/148 (35%), Positives = 87/148 (58%)
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
D + +VSG D T+KIW+ S+ +C + L GH+ V C ++ + +I++GS D +VR+WD
Sbjct: 312 DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDER--VIITGSSDSTVRVWD 369
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ--CLKTLIDDDNP 197
V G+ L TL H + V + FN ++V+ S D +WD AS L+ ++
Sbjct: 370 VNAGEMLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 427
Query: 198 PVSFVKFSPNGKYILAATLDNTLKLWDS 225
V+ V F + KYI++A+ D T+K+W++
Sbjct: 428 AVNVVDF--DDKYIVSASGDRTIKVWNT 453
Score = 222 (83.2 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 52/186 (27%), Positives = 104/186 (55%)
Query: 42 LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSG 101
+ S D IKIW + ++ ++GH G S + D R++++GS D T+++W++++G
Sbjct: 316 IVSGLRDNTIKIWDKSTLECKRILTGHT-G-SVLCLQYDERVIITGSSDSTVRVWDVNAG 373
Query: 102 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCL---KTLPAHSDPVSA 158
+ L TL H V FN + ++V+ S D S+ +WD+ + + + L H V+
Sbjct: 374 EMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNV 431
Query: 159 VHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN 218
V F D IVS+S D ++W+T++ + ++TL + ++ +++ + +++ + DN
Sbjct: 432 VDF--DDKYIVSASGDRTIKVWNTSTCEFVRTL-NGHKRGIACLQY--RDRLVVSGSSDN 486
Query: 219 TLKLWD 224
T++LWD
Sbjct: 487 TIRLWD 492
Score = 220 (82.5 bits), Expect = 3.3e-17, P = 3.3e-17
Identities = 54/208 (25%), Positives = 109/208 (52%)
Query: 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 79
K L GHT +V +++ + + S+D +++W G+ T+ H + + +++
Sbjct: 336 KRILTGHTGSVLCLQYDERV--IITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNN 393
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCL---KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 136
++V+ S D+++ +W+++S + + L GH V +F+ + IVS S D +++
Sbjct: 394 G--MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIK 449
Query: 137 IWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 196
+W+ T + ++TL H ++ + + RD L+VS S D R+WD G CL+ L +
Sbjct: 450 VWNTSTCEFVRTLNGHKRGIACLQY-RD-RLVVSGSSDNTIRLWDIECGACLRVL-EGHE 506
Query: 197 PPVSFVKFSPNGKYILAATLDNTLKLWD 224
V ++F + K I++ D +K+WD
Sbjct: 507 ELVRCIRF--DNKRIVSGAYDGKIKVWD 532
Score = 147 (56.8 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 41/143 (28%), Positives = 72/143 (50%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GH + ++ +++ + S S+D I++W G + + GH+ + + + D+
Sbjct: 461 TLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DN 516
Query: 82 RLLVSGSDDKTLKIWELSSGK---------CLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 132
+ +VSG+ D +K+W+L + CL+TL HS VF F+ IVS S D
Sbjct: 517 KRIVSGAYDGKIKVWDLMAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQ--IVSSSHD 574
Query: 133 ESVRIWDVRTGKCLKTLPAHSDP 155
+++ IWD L AH++P
Sbjct: 575 DTILIWDF-----LNDPAAHAEP 592
>UNIPROTKB|F1LMH8 [details] [associations]
symbol:Btrc "Protein Btrc" species:10116 "Rattus
norvegicus" [GO:0000209 "protein polyubiquitination" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 GeneTree:ENSGT00690000101849 IPI:IPI00372531
PRIDE:F1LMH8 Ensembl:ENSRNOT00000022426 ArrayExpress:F1LMH8
Uniprot:F1LMH8
Length = 605
Score = 288 (106.4 bits), Expect = 1.4e-24, P = 1.4e-24
Identities = 64/172 (37%), Positives = 99/172 (57%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L+ L GH AV+ V F + +++ S+S D+ IK+W +F +T++GHK GI+ + +
Sbjct: 418 LRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR 475
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
RL+VSGS D T+++W++ G CL+ L+GH V C F+ + IVSG++D +++W
Sbjct: 476 D--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVW 531
Query: 139 DVRTGK---------CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181
D+ CL+TL HS V + F D IVSSS+D IWD
Sbjct: 532 DLMAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWD 581
Score = 287 (106.1 bits), Expect = 1.8e-24, P = 1.8e-24
Identities = 67/215 (31%), Positives = 116/215 (53%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW---GAYDGKFEKTISGHKLGISDVAWS 78
TL H +AV ++F+ NG + + S D+ I +W D + + GH+ ++ V +
Sbjct: 378 TLIHHCEAVLHLRFN-NG-MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF- 434
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
D + +VS S D+T+K+W S+ + ++TL GH + C + + L+VSGS D ++R+W
Sbjct: 435 -DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLW 491
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT---------ASGQCLK 189
D+ G CL+ L H + V + F D IVS +YDG ++WD A CL+
Sbjct: 492 DIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLMAALDPRAPAGTLCLR 549
Query: 190 TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
TL++ V ++F I++++ D+T+ +WD
Sbjct: 550 TLVEHSGR-VFRLQFDEF--QIVSSSHDDTILIWD 581
Score = 237 (88.5 bits), Expect = 4.8e-19, P = 4.8e-19
Identities = 52/148 (35%), Positives = 87/148 (58%)
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
D + +VSG D T+KIW+ S+ +C + L GH+ V C ++ + +I++GS D +VR+WD
Sbjct: 312 DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDER--VIITGSSDSTVRVWD 369
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ--CLKTLIDDDNP 197
V G+ L TL H + V + FN ++V+ S D +WD AS L+ ++
Sbjct: 370 VNAGEMLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 427
Query: 198 PVSFVKFSPNGKYILAATLDNTLKLWDS 225
V+ V F + KYI++A+ D T+K+W++
Sbjct: 428 AVNVVDF--DDKYIVSASGDRTIKVWNT 453
Score = 222 (83.2 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 52/186 (27%), Positives = 104/186 (55%)
Query: 42 LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSG 101
+ S D IKIW + ++ ++GH G S + D R++++GS D T+++W++++G
Sbjct: 316 IVSGLRDNTIKIWDKSTLECKRILTGHT-G-SVLCLQYDERVIITGSSDSTVRVWDVNAG 373
Query: 102 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCL---KTLPAHSDPVSA 158
+ L TL H V FN + ++V+ S D S+ +WD+ + + + L H V+
Sbjct: 374 EMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNV 431
Query: 159 VHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN 218
V F D IVS+S D ++W+T++ + ++TL + ++ +++ + +++ + DN
Sbjct: 432 VDF--DDKYIVSASGDRTIKVWNTSTCEFVRTL-NGHKRGIACLQY--RDRLVVSGSSDN 486
Query: 219 TLKLWD 224
T++LWD
Sbjct: 487 TIRLWD 492
Score = 220 (82.5 bits), Expect = 3.3e-17, P = 3.3e-17
Identities = 54/208 (25%), Positives = 109/208 (52%)
Query: 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 79
K L GHT +V +++ + + S+D +++W G+ T+ H + + +++
Sbjct: 336 KRILTGHTGSVLCLQYDERV--IITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNN 393
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCL---KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 136
++V+ S D+++ +W+++S + + L GH V +F+ + IVS S D +++
Sbjct: 394 G--MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIK 449
Query: 137 IWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 196
+W+ T + ++TL H ++ + + RD L+VS S D R+WD G CL+ L +
Sbjct: 450 VWNTSTCEFVRTLNGHKRGIACLQY-RD-RLVVSGSSDNTIRLWDIECGACLRVL-EGHE 506
Query: 197 PPVSFVKFSPNGKYILAATLDNTLKLWD 224
V ++F + K I++ D +K+WD
Sbjct: 507 ELVRCIRF--DNKRIVSGAYDGKIKVWD 532
Score = 146 (56.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 40/151 (26%), Positives = 72/151 (47%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GH + ++ +++ + S S+D I++W G + + GH+ + + + D+
Sbjct: 461 TLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DN 516
Query: 82 RLLVSGSDDKTLKIWELSSGK---------CLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 132
+ +VSG+ D +K+W+L + CL+TL HS VF F+ IVS S D
Sbjct: 517 KRIVSGAYDGKIKVWDLMAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQ--IVSSSHD 574
Query: 133 ESVRIWDVRTGKCLKTLPAHSDPVSAVHFNR 163
+++ IWD P S + + +R
Sbjct: 575 DTILIWDFLNDPATHAEPPRSPSRTYTYISR 605
>POMBASE|SPAC57A10.05c [details] [associations]
symbol:pof1 "F-box/WD repeat protein protein Pof1"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0030674 "protein binding, bridging" evidence=IPI]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IPI] [GO:0071276 "cellular
response to cadmium ion" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 PomBase:SPAC57A10.05c
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071276 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0042787
HOGENOM:HOG000166480 KO:K10259 OrthoDB:EOG496313 EMBL:AB032410
PIR:T38932 RefSeq:NP_593310.1 ProteinModelPortal:P87053
IntAct:P87053 STRING:P87053 EnsemblFungi:SPAC57A10.05c.1
GeneID:2542914 KEGG:spo:SPAC57A10.05c NextBio:20803951
Uniprot:P87053
Length = 605
Score = 288 (106.4 bits), Expect = 1.4e-24, P = 1.4e-24
Identities = 68/202 (33%), Positives = 105/202 (51%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
L+GH+ V ++ N LAS S D I++W + + GH G++ + + D
Sbjct: 269 LSGHSDGVMCLQLVRN--ILASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQF--DQC 324
Query: 83 LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 142
L+SGS DKT++IW + +C+ L GH++ V C F+ S L+VSGS D +V++W
Sbjct: 325 KLISGSMDKTIRIWNYRTSECISILHGHTDSVLCLTFD--STLLVSGSADCTVKLWHFSG 382
Query: 143 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 202
GK + TL H+ PV++V RD L++S S D +IW + CL T P S
Sbjct: 383 GKRI-TLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHTFSAHIGPVQSLA 441
Query: 203 KFSPNGKYILAATLDNTLKLWD 224
+ + +LD T+K WD
Sbjct: 442 LADSR---LFSCSLDGTIKQWD 460
Score = 236 (88.1 bits), Expect = 6.2e-19, P = 6.2e-19
Identities = 54/165 (32%), Positives = 94/165 (56%)
Query: 65 ISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSN 124
+SGH G+ + +L SGS D T+++W L++ + + L+GHS+ V C F+ Q
Sbjct: 269 LSGHSDGV--MCLQLVRNILASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQFD-QCK 325
Query: 125 LIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 184
LI SGS D+++RIW+ RT +C+ L H+D V + F D +L+VS S D ++W +
Sbjct: 326 LI-SGSMDKTIRIWNYRTSECISILHGHTDSVLCLTF--DSTLLVSGSADCTVKLWHFSG 382
Query: 185 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVT 229
G+ + + PV+ V+ + +L+ + D+T+K+W + T
Sbjct: 383 GK--RITLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNT 425
Score = 235 (87.8 bits), Expect = 7.9e-19, P = 7.9e-19
Identities = 63/201 (31%), Positives = 100/201 (49%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
L GHT +V + F + L S SAD +K+W GK T+ GH ++ V D
Sbjct: 349 LHGHTDSVLCLTF--DSTLLVSGSADCTVKLWHFSGGK-RITLRGHTGPVNSVRIIRDRG 405
Query: 83 LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 142
L++SGSDD T+KIW L + CL T H V S L S S D +++ WD+
Sbjct: 406 LVLSGSDDSTIKIWSLETNTCLHTFSAHIGPVQSLAL-ADSRLF-SCSLDGTIKQWDIEK 463
Query: 143 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 202
KC+ TL H + V + D ++S ++DG+ ++W+ +C+ TL + + PV+ V
Sbjct: 464 KKCVHTLFGHIEGVWEIA--ADHLRLISGAHDGVVKVWEAC--ECVHTL-KNHSEPVTSV 518
Query: 203 KFSPNGKYILAATLDNTLKLW 223
+++ + D + LW
Sbjct: 519 ALGDCE--VVSGSEDGKIYLW 537
Score = 201 (75.8 bits), Expect = 3.7e-15, P = 3.7e-15
Identities = 56/161 (34%), Positives = 82/161 (50%)
Query: 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 79
+ TL GHT V+SV+ + + S S D IKIW T S H + +A +
Sbjct: 385 RITLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHTFSAHIGPVQSLALA- 443
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
DSRL S S D T+K W++ KC+ TL GH V+ ++SG+ D V++W+
Sbjct: 444 DSRLF-SCSLDGTIKQWDIEKKKCVHTLFGHIEGVW--EIAADHLRLISGAHDGVVKVWE 500
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 180
+C+ TL HS+PV++V D +VS S DG +W
Sbjct: 501 AC--ECVHTLKNHSEPVTSVALG-DCE-VVSGSEDGKIYLW 537
Score = 143 (55.4 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 43/147 (29%), Positives = 67/147 (45%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
T + H V S+ + + L S S D IK W K T+ GH G+ ++A +D
Sbjct: 429 TFSAHIGPVQSLALADSR--LFSCSLDGTIKQWDIEKKKCVHTLFGHIEGVWEIA--ADH 484
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
L+SG+ D +K+WE +C+ TLK HS V +VSGS D + +W
Sbjct: 485 LRLISGAHDGVVKVWEAC--ECVHTLKNHSEPVTSVALGDCE--VVSGSEDGKIYLWLFN 540
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLI 168
+ S P+S+++ R S +
Sbjct: 541 NAPNESPVSTQSVPISSLNGQRSNSSV 567
>UNIPROTKB|E1BV27 [details] [associations]
symbol:TBL1X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0003682 GO:GO:0005667
GO:GO:0044212 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045444 GeneTree:ENSGT00690000102024 KO:K04508 CTD:6907
OMA:RAHSVNN EMBL:AADN02017315 EMBL:AADN02017316 EMBL:AADN02017317
EMBL:AADN02017318 EMBL:AADN02017319 EMBL:AADN02017320
EMBL:AADN02017321 EMBL:AADN02017322 EMBL:AADN02017323
EMBL:AADN02017324 IPI:IPI00589153 RefSeq:NP_001153226.1
UniGene:Gga.5909 ProteinModelPortal:E1BV27
Ensembl:ENSGALT00000021808 GeneID:426045 KEGG:gga:426045
NextBio:20827776 Uniprot:E1BV27
Length = 523
Score = 286 (105.7 bits), Expect = 1.5e-24, P = 1.5e-24
Identities = 61/217 (28%), Positives = 110/217 (50%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L TL H + ++K++ G ++ S+ DK IW A+ G+ ++ H DV W
Sbjct: 267 LASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ 326
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
+++ S S D + + L + +KT +GH+N V ++P L+ S S D +++IW
Sbjct: 327 NNTTF-ASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIW 385
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGS---------LIVSSSYDGLCRIWDTASGQCLK 189
++ C+ L AHS + + ++ G ++ S+S+D R+WD G C+
Sbjct: 386 SMKQDTCVHDLQAHSKEIYTIKWSPTGPGTSNPNSNIMLASASFDSTVRLWDVDRGVCIH 445
Query: 190 TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSK 226
TL P S V FSP+GKY+ + + D + +W+++
Sbjct: 446 TLTKHQEPVYS-VAFSPDGKYLASGSFDKCVHIWNTQ 481
Score = 269 (99.8 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 58/157 (36%), Positives = 81/157 (51%)
Query: 38 NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWE 97
N AS S D I + + KT GH ++ + W LL S SDD TLKIW
Sbjct: 327 NNTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWS 386
Query: 98 LSSGKCLKTLKGHSNYVFCCNF--------NPQSNLIV-SGSFDESVRIWDVRTGKCLKT 148
+ C+ L+ HS ++ + NP SN+++ S SFD +VR+WDV G C+ T
Sbjct: 387 MKQDTCVHDLQAHSKEIYTIKWSPTGPGTSNPNSNIMLASASFDSTVRLWDVDRGVCIHT 446
Query: 149 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 185
L H +PV +V F+ DG + S S+D IW+T SG
Sbjct: 447 LTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSG 483
Score = 225 (84.3 bits), Expect = 6.9e-18, P = 6.9e-18
Identities = 61/218 (27%), Positives = 98/218 (44%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD----GKFEKTI------SGHKL-- 70
L GH V ++P + LAS S D +IW + G + + GH +
Sbjct: 174 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNSGSTQLVLRHCIREGGHDVPS 233
Query: 71 --GISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVS 128
++ + W+SD LL +GS D +IW G TL H +F +N + N I+S
Sbjct: 234 NKDVTSLDWNSDGTLLATGSYDGFARIWT-EDGNLASTLGQHKGPIFALKWNKKGNYILS 292
Query: 129 GSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCL 188
D++ IWD TG+ + P HS P V + ++ + S S D + + +
Sbjct: 293 AGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDW-QNNTTFASCSTDMCIHVCRLGCDRPV 351
Query: 189 KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSK 226
KT N V+ +K+ P+G + + + D TLK+W K
Sbjct: 352 KTFQGHTNE-VNAIKWDPSGMLLASCSDDMTLKIWSMK 388
Score = 221 (82.9 bits), Expect = 1.9e-17, P = 1.9e-17
Identities = 50/166 (30%), Positives = 83/166 (50%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS--- 78
T GHT V+++K+ P+G LAS S D +KIW + H I + WS
Sbjct: 353 TFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSPTG 412
Query: 79 ------SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 132
+ + +L S S D T+++W++ G C+ TL H V+ F+P + SGSFD
Sbjct: 413 PGTSNPNSNIMLASASFDSTVRLWDVDRGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFD 472
Query: 133 ESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LC 177
+ V IW+ ++G + + + + V +N G + +S+ DG +C
Sbjct: 473 KCVHIWNTQSGTLVHSYRG-TGGIFEVCWNARGDKVGASASDGSVC 517
Score = 152 (58.6 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 38/128 (29%), Positives = 65/128 (50%)
Query: 23 LAGHTKAVSSVKFSPNGE---------WLASSSADKLIKIWGAYDGKFEKTISGHKLGIS 73
L H+K + ++K+SP G LAS+S D +++W G T++ H+ +
Sbjct: 396 LQAHSKEIYTIKWSPTGPGTSNPNSNIMLASASFDSTVRLWDVDRGVCIHTLTKHQEPVY 455
Query: 74 DVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 133
VA+S D + L SGS DK + IW SG + + +G C +N + + + + + D
Sbjct: 456 SVAFSPDGKYLASGSFDKCVHIWNTQSGTLVHSYRGTGGIFEVC-WNARGDKVGASASDG 514
Query: 134 SVRIWDVR 141
SV + D+R
Sbjct: 515 SVCVLDLR 522
>UNIPROTKB|Q68DS0 [details] [associations]
symbol:DKFZp781N011 "Putative uncharacterized protein
DKFZp781N011" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AL627424 EMBL:AL133387 EMBL:AL445463
RefSeq:NP_003930.1 RefSeq:NP_378663.1 UniGene:Hs.643802
UniGene:Hs.713753 GeneID:8945 KEGG:hsa:8945 CTD:8945 HGNC:HGNC:1144
HOVERGEN:HBG002521 KO:K03362 ChiTaRS:BTRC GenomeRNAi:8945
EMBL:CR749295 IPI:IPI01012795 RefSeq:NP_001243785.1 SMR:Q68DS0
STRING:Q68DS0 Ensembl:ENST00000393441 Uniprot:Q68DS0
Length = 564
Score = 287 (106.1 bits), Expect = 1.5e-24, P = 1.5e-24
Identities = 65/172 (37%), Positives = 100/172 (58%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L+ L GH AV+ V F + +++ S+S D+ IK+W +F +T++GHK GI+ + +
Sbjct: 377 LRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR 434
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
RL+VSGS D T+++W++ G CL+ L+GH V C F+ + IVSG++D +++W
Sbjct: 435 D--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVW 490
Query: 139 DV--------RTGK-CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181
D+ G CL+TL HS V + F D IVSSS+D IWD
Sbjct: 491 DLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWD 540
Score = 287 (106.1 bits), Expect = 1.5e-24, P = 1.5e-24
Identities = 67/215 (31%), Positives = 116/215 (53%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW---GAYDGKFEKTISGHKLGISDVAWS 78
TL H +AV ++F+ NG + + S D+ I +W D + + GH+ ++ V +
Sbjct: 337 TLIHHCEAVLHLRFN-NG-MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF- 393
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
D + +VS S D+T+K+W S+ + ++TL GH + C + + L+VSGS D ++R+W
Sbjct: 394 -DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLW 450
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT---------ASGQCLK 189
D+ G CL+ L H + V + F D IVS +YDG ++WD A CL+
Sbjct: 451 DIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLR 508
Query: 190 TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
TL++ V ++F I++++ D+T+ +WD
Sbjct: 509 TLVEHSGR-VFRLQFDEF--QIVSSSHDDTILIWD 540
Score = 239 (89.2 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 52/148 (35%), Positives = 88/148 (59%)
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
D + +VSG D T+KIW+ ++ +C + L GH+ V C ++ + +I++GS D +VR+WD
Sbjct: 271 DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDER--VIITGSSDSTVRVWD 328
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ--CLKTLIDDDNP 197
V TG+ L TL H + V + FN ++V+ S D +WD AS L+ ++
Sbjct: 329 VNTGEMLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 386
Query: 198 PVSFVKFSPNGKYILAATLDNTLKLWDS 225
V+ V F + KYI++A+ D T+K+W++
Sbjct: 387 AVNVVDF--DDKYIVSASGDRTIKVWNT 412
Score = 222 (83.2 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 52/186 (27%), Positives = 104/186 (55%)
Query: 42 LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSG 101
+ S D IKIW + ++ ++GH G S + D R++++GS D T+++W++++G
Sbjct: 275 IVSGLRDNTIKIWDKNTLECKRILTGHT-G-SVLCLQYDERVIITGSSDSTVRVWDVNTG 332
Query: 102 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCL---KTLPAHSDPVSA 158
+ L TL H V FN + ++V+ S D S+ +WD+ + + + L H V+
Sbjct: 333 EMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNV 390
Query: 159 VHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN 218
V F D IVS+S D ++W+T++ + ++TL + ++ +++ + +++ + DN
Sbjct: 391 VDF--DDKYIVSASGDRTIKVWNTSTCEFVRTL-NGHKRGIACLQY--RDRLVVSGSSDN 445
Query: 219 TLKLWD 224
T++LWD
Sbjct: 446 TIRLWD 451
Score = 221 (82.9 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 54/208 (25%), Positives = 109/208 (52%)
Query: 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 79
K L GHT +V +++ + + S+D +++W G+ T+ H + + +++
Sbjct: 295 KRILTGHTGSVLCLQYDERV--IITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNN 352
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCL---KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 136
++V+ S D+++ +W+++S + + L GH V +F+ + IVS S D +++
Sbjct: 353 G--MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIK 408
Query: 137 IWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 196
+W+ T + ++TL H ++ + + RD L+VS S D R+WD G CL+ L +
Sbjct: 409 VWNTSTCEFVRTLNGHKRGIACLQY-RD-RLVVSGSSDNTIRLWDIECGACLRVL-EGHE 465
Query: 197 PPVSFVKFSPNGKYILAATLDNTLKLWD 224
V ++F + K I++ D +K+WD
Sbjct: 466 ELVRCIRF--DNKRIVSGAYDGKIKVWD 491
Score = 148 (57.2 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 41/151 (27%), Positives = 74/151 (49%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GH + ++ +++ + S S+D I++W G + + GH+ + + + D+
Sbjct: 420 TLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DN 475
Query: 82 RLLVSGSDDKTLKIWEL--------SSGK-CLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 132
+ +VSG+ D +K+W+L +G CL+TL HS VF F+ IVS S D
Sbjct: 476 KRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQ--IVSSSHD 533
Query: 133 ESVRIWDVRTGKCLKTLPAHSDPVSAVHFNR 163
+++ IWD + P S + + +R
Sbjct: 534 DTILIWDFLNDPAAQAEPPRSPSRTYTYISR 564
>UNIPROTKB|F1MVN1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:DAAA02058986 EMBL:DAAA02058987
EMBL:DAAA02058988 EMBL:DAAA02058989 EMBL:DAAA02058990
EMBL:DAAA02058991 IPI:IPI00717164 UniGene:Bt.25271
Ensembl:ENSBTAT00000009830 Uniprot:F1MVN1
Length = 569
Score = 287 (106.1 bits), Expect = 1.5e-24, P = 1.5e-24
Identities = 65/172 (37%), Positives = 100/172 (58%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L+ L GH AV+ V F + +++ S+S D+ IK+W +F +T++GHK GI+ + +
Sbjct: 382 LRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR 439
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
RL+VSGS D T+++W++ G CL+ L+GH V C F+ + IVSG++D +++W
Sbjct: 440 D--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVW 495
Query: 139 DV--------RTGK-CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181
D+ G CL+TL HS V + F D IVSSS+D IWD
Sbjct: 496 DLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWD 545
Score = 287 (106.1 bits), Expect = 1.5e-24, P = 1.5e-24
Identities = 67/215 (31%), Positives = 116/215 (53%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW---GAYDGKFEKTISGHKLGISDVAWS 78
TL H +AV ++F+ NG + + S D+ I +W D + + GH+ ++ V +
Sbjct: 342 TLIHHCEAVLHLRFN-NG-MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF- 398
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
D + +VS S D+T+K+W S+ + ++TL GH + C + + L+VSGS D ++R+W
Sbjct: 399 -DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLW 455
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT---------ASGQCLK 189
D+ G CL+ L H + V + F D IVS +YDG ++WD A CL+
Sbjct: 456 DIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLR 513
Query: 190 TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
TL++ V ++F I++++ D+T+ +WD
Sbjct: 514 TLVEHSGR-VFRLQFDEF--QIVSSSHDDTILIWD 545
Score = 242 (90.2 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 53/148 (35%), Positives = 88/148 (59%)
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
D + +VSG D T+KIW+ S+ +C + L GH+ V C ++ + +I++GS D +VR+WD
Sbjct: 276 DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDER--VIITGSSDSTVRVWD 333
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ--CLKTLIDDDNP 197
V TG+ L TL H + V + FN ++V+ S D +WD AS L+ ++
Sbjct: 334 VNTGEMLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 391
Query: 198 PVSFVKFSPNGKYILAATLDNTLKLWDS 225
V+ V F + KYI++A+ D T+K+W++
Sbjct: 392 AVNVVDF--DDKYIVSASGDRTIKVWNT 417
Score = 222 (83.2 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 52/186 (27%), Positives = 104/186 (55%)
Query: 42 LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSG 101
+ S D IKIW + ++ ++GH G S + D R++++GS D T+++W++++G
Sbjct: 280 IVSGLRDNTIKIWDKSTLECKRILTGHT-G-SVLCLQYDERVIITGSSDSTVRVWDVNTG 337
Query: 102 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCL---KTLPAHSDPVSA 158
+ L TL H V FN + ++V+ S D S+ +WD+ + + + L H V+
Sbjct: 338 EMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNV 395
Query: 159 VHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN 218
V F D IVS+S D ++W+T++ + ++TL + ++ +++ + +++ + DN
Sbjct: 396 VDF--DDKYIVSASGDRTIKVWNTSTCEFVRTL-NGHKRGIACLQY--RDRLVVSGSSDN 450
Query: 219 TLKLWD 224
T++LWD
Sbjct: 451 TIRLWD 456
Score = 221 (82.9 bits), Expect = 2.3e-17, P = 2.3e-17
Identities = 54/208 (25%), Positives = 109/208 (52%)
Query: 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 79
K L GHT +V +++ + + S+D +++W G+ T+ H + + +++
Sbjct: 300 KRILTGHTGSVLCLQYDERV--IITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNN 357
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCL---KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 136
++V+ S D+++ +W+++S + + L GH V +F+ + IVS S D +++
Sbjct: 358 G--MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIK 413
Query: 137 IWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 196
+W+ T + ++TL H ++ + + RD L+VS S D R+WD G CL+ L +
Sbjct: 414 VWNTSTCEFVRTLNGHKRGIACLQY-RD-RLVVSGSSDNTIRLWDIECGACLRVL-EGHE 470
Query: 197 PPVSFVKFSPNGKYILAATLDNTLKLWD 224
V ++F + K I++ D +K+WD
Sbjct: 471 ELVRCIRF--DNKRIVSGAYDGKIKVWD 496
Score = 148 (57.2 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 41/151 (27%), Positives = 74/151 (49%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GH + ++ +++ + S S+D I++W G + + GH+ + + + D+
Sbjct: 425 TLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DN 480
Query: 82 RLLVSGSDDKTLKIWEL--------SSGK-CLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 132
+ +VSG+ D +K+W+L +G CL+TL HS VF F+ IVS S D
Sbjct: 481 KRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQ--IVSSSHD 538
Query: 133 ESVRIWDVRTGKCLKTLPAHSDPVSAVHFNR 163
+++ IWD + P S + + +R
Sbjct: 539 DTILIWDFLNDPAAQAEPPRSPSRTYTYISR 569
>ZFIN|ZDB-GENE-040426-1192 [details] [associations]
symbol:tbl1xr1 "transducin (beta)-like 1 X-linked
receptor 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040426-1192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
EMBL:CT027646 IPI:IPI00854144 Ensembl:ENSDART00000085132
Bgee:F1Q5U2 Uniprot:F1Q5U2
Length = 511
Score = 285 (105.4 bits), Expect = 1.7e-24, P = 1.7e-24
Identities = 61/218 (27%), Positives = 114/218 (52%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L TL H + ++K++ G ++ S+ DK IW A+ G+ ++ H DV W
Sbjct: 254 LASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ 313
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
S++ S S D + + +L + +KT +GH+N V ++P NL+ S S D ++++W
Sbjct: 314 SNNTF-ASCSTDMCIHVCKLGQERPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKLW 372
Query: 139 DVRTGKCLKTLPAHSDPVSAVHF--------NRDGSLIV--SSSYDGLCRIWDTASGQCL 188
++ C+ L AHS + + + N + +L++ S+S+D R+WD G C+
Sbjct: 373 SMKQDTCVHDLQAHSKEIYTIKWSPTGPGTNNPNANLMLARSASFDSTVRLWDAERGACI 432
Query: 189 KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSK 226
TL P S V FSP+G+++ + + D + +W+++
Sbjct: 433 HTLTKHQEPVYS-VAFSPDGRHLASGSFDKCVHIWNTQ 469
Score = 263 (97.6 bits), Expect = 4.6e-22, P = 4.6e-22
Identities = 58/170 (34%), Positives = 85/170 (50%)
Query: 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV 85
H+ V + N + AS S D I + + KT GH ++ + W LL
Sbjct: 303 HSAPALDVDWQSNNTF-ASCSTDMCIHVCKLGQERPIKTFQGHTNEVNAIKWDPTGNLLA 361
Query: 86 SGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNF--------NPQSNLIV--SGSFDESV 135
S SDD TLK+W + C+ L+ HS ++ + NP +NL++ S SFD +V
Sbjct: 362 SCSDDMTLKLWSMKQDTCVHDLQAHSKEIYTIKWSPTGPGTNNPNANLMLARSASFDSTV 421
Query: 136 RIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 185
R+WD G C+ TL H +PV +V F+ DG + S S+D IW+T SG
Sbjct: 422 RLWDAERGACIHTLTKHQEPVYSVAFSPDGRHLASGSFDKCVHIWNTQSG 471
Score = 221 (82.9 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 63/218 (28%), Positives = 95/218 (43%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD---GKFEKTISGHKL--GISDVA- 76
L GH V ++P + LAS S D +IW + G + + H + G DV
Sbjct: 161 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSESSTGGSTQLVLRHCIREGGQDVPS 220
Query: 77 --------WSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVS 128
W+S+ LL +GS D +IW G TL H +F +N + N I+S
Sbjct: 221 NKDVTSLDWNSEGTLLATGSYDGFARIWT-KDGNLASTLGQHKGPIFALKWNKKGNFILS 279
Query: 129 GSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCL 188
D++ IWD TG+ + P HS P V + + + S S D + + +
Sbjct: 280 AGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTF-ASCSTDMCIHVCKLGQERPI 338
Query: 189 KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSK 226
KT N V+ +K+ P G + + + D TLKLW K
Sbjct: 339 KTFQGHTNE-VNAIKWDPTGNLLASCSDDMTLKLWSMK 375
Score = 213 (80.0 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 49/167 (29%), Positives = 82/167 (49%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS-- 79
T GHT V+++K+ P G LAS S D +K+W + H I + WS
Sbjct: 340 TFQGHTNEVNAIKWDPTGNLLASCSDDMTLKLWSMKQDTCVHDLQAHSKEIYTIKWSPTG 399
Query: 80 ------DSRLLV--SGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 131
++ L++ S S D T+++W+ G C+ TL H V+ F+P + SGSF
Sbjct: 400 PGTNNPNANLMLARSASFDSTVRLWDAERGACIHTLTKHQEPVYSVAFSPDGRHLASGSF 459
Query: 132 DESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LC 177
D+ V IW+ ++G + + + + V +N G + +S+ DG +C
Sbjct: 460 DKCVHIWNTQSGALVNSYRG-TGGIFEVCWNSTGDKVGASASDGSVC 505
Score = 149 (57.5 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 40/129 (31%), Positives = 65/129 (50%)
Query: 23 LAGHTKAVSSVKFSPNGE---------WLA-SSSADKLIKIWGAYDGKFEKTISGHKLGI 72
L H+K + ++K+SP G LA S+S D +++W A G T++ H+ +
Sbjct: 383 LQAHSKEIYTIKWSPTGPGTNNPNANLMLARSASFDSTVRLWDAERGACIHTLTKHQEPV 442
Query: 73 SDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 132
VA+S D R L SGS DK + IW SG + + +G C +N + + + + D
Sbjct: 443 YSVAFSPDGRHLASGSFDKCVHIWNTQSGALVNSYRGTGGIFEVC-WNSTGDKVGASASD 501
Query: 133 ESVRIWDVR 141
SV + D+R
Sbjct: 502 GSVCVLDLR 510
>TAIR|locus:2027749 [details] [associations]
symbol:SMU1 "AT1G73720" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0008380 "RNA splicing"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
EMBL:CP002684 GO:GO:0005634 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 GO:GO:0080008
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668 KO:K13111
OMA:NGHWDTV EMBL:AF462796 EMBL:AY102129 IPI:IPI00544131
RefSeq:NP_177513.2 UniGene:At.27865 ProteinModelPortal:Q8W117
SMR:Q8W117 IntAct:Q8W117 PaxDb:Q8W117 PRIDE:Q8W117
EnsemblPlants:AT1G73720.1 GeneID:843707 KEGG:ath:AT1G73720
TAIR:At1g73720 InParanoid:Q8W117 PhylomeDB:Q8W117
ProtClustDB:CLSN2690492 Genevestigator:Q8W117 Uniprot:Q8W117
Length = 511
Score = 285 (105.4 bits), Expect = 1.7e-24, P = 1.7e-24
Identities = 64/203 (31%), Positives = 107/203 (52%)
Query: 17 YVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG--------H 68
+ +KF H + +FSP+G++LASSS D I++W GK +K + H
Sbjct: 206 HTIKFGKKSHAECA---RFSPDGQFLASSSVDGFIEVWDYISGKLKKDLQYQADESFMMH 262
Query: 69 KLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVS 128
+ + +S DS +L SGS D +KIW + +G C++ HS V +F+ + ++S
Sbjct: 263 DDPVLCIDFSRDSEMLASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLLS 322
Query: 129 GSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCL 188
SFD++ RI +++GK LK H+ V+ F DGS I+++S D ++WD+ + CL
Sbjct: 323 TSFDQTARIHGLKSGKLLKEFRGHTSYVNHAIFTSDGSRIITASSDCTVKVWDSKTTDCL 382
Query: 189 KTLIDDDNPPVSFVKFSPNGKYI 211
+T PP+ S N ++
Sbjct: 383 QTF--KPPPPLRGTDASVNSIHL 403
Score = 258 (95.9 bits), Expect = 1.6e-21, P = 1.6e-21
Identities = 59/168 (35%), Positives = 93/168 (55%)
Query: 67 GHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKG--------HSNYVFCCN 118
G K +S D + L S S D +++W+ SGK K L+ H + V C +
Sbjct: 211 GKKSHAECARFSPDGQFLASSSVDGFIEVWDYISGKLKKDLQYQADESFMMHDDPVLCID 270
Query: 119 FNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCR 178
F+ S ++ SGS D ++IW +RTG C++ AHS V+++ F+RDGS ++S+S+D R
Sbjct: 271 FSRDSEMLASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQTAR 330
Query: 179 IWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSK 226
I SG+ LK + V+ F+ +G I+ A+ D T+K+WDSK
Sbjct: 331 IHGLKSGKLLKEFRGHTSY-VNHAIFTSDGSRIITASSDCTVKVWDSK 377
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 284 (105.0 bits), Expect = 1.8e-24, P = 1.8e-24
Identities = 59/176 (33%), Positives = 96/176 (54%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
+L GH++AV SV FSP G++LAS S D ++ W T GH+ + ++WS D
Sbjct: 111 SLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDG 170
Query: 82 RLLVSGSDDKTLKIWELSSGKCL-KTLKGHSNYVFCCNF-----NPQSNLIVSGSFDESV 135
+ L SG + + +W+ S+G + +TL GHS ++ ++ NP+ + S S D SV
Sbjct: 171 KKLASGCKNGQILLWDPSTGTQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSV 230
Query: 136 RIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 191
R+WD G+C + L H+ V+ + + DG L+ S+S D ++W G +TL
Sbjct: 231 RVWDTTAGRCERILTGHTQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRTL 285
Score = 266 (98.7 bits), Expect = 1.8e-22, P = 1.8e-22
Identities = 47/116 (40%), Positives = 73/116 (62%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
+ GH ++ V FSP+ +AS+S DK IK+W GK+ ++ GH + +AWS+DSR
Sbjct: 370 MTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSR 429
Query: 83 LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
LLVSGS D TLK+W++ + K L GH++ V+ +++P + SG D+ +RIW
Sbjct: 430 LLVSGSSDSTLKVWDVKAQKLTTDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 485
Score = 257 (95.5 bits), Expect = 1.8e-21, P = 1.8e-21
Identities = 55/142 (38%), Positives = 84/142 (59%)
Query: 40 EWLASSSADKLIKIWG-AYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWEL 98
E L S S D + +W A D K ++GH+ I+ V +S DSR++ S S DK++K+W+
Sbjct: 344 ERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDG 403
Query: 99 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSA 158
+GK L +L+GH V+ ++ S L+VSGS D ++++WDV+ K LP H+D V A
Sbjct: 404 RTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLTTDLPGHADEVYA 463
Query: 159 VHFNRDGSLIVSSSYDGLCRIW 180
V ++ DG + S D RIW
Sbjct: 464 VDWSPDGQRVASGGKDKCLRIW 485
Score = 230 (86.0 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 51/141 (36%), Positives = 78/141 (55%)
Query: 84 LVSGSDDKTLKIWELSSGKC-LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 142
LVSGSDD TL +W + K L + GH + F+P S ++ S SFD+S+++WD RT
Sbjct: 346 LVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRT 405
Query: 143 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 202
GK L +L H V + ++ D L+VS S D ++WD + Q L T + V V
Sbjct: 406 GKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKA-QKLTTDLPGHADEVYAV 464
Query: 203 KFSPNGKYILAATLDNTLKLW 223
+SP+G+ + + D L++W
Sbjct: 465 DWSPDGQRVASGGKDKCLRIW 485
Score = 226 (84.6 bits), Expect = 4.5e-18, P = 4.5e-18
Identities = 61/209 (29%), Positives = 110/209 (52%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
L GHT++V+ +++ +G L S+S D+ IK+W A+DG +T+ GH ++ +A S+D
Sbjct: 244 LTGHTQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYA 302
Query: 83 LLVSGSD--DKTLKIWELSSGKCLKTLK--GHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
L + + T+ +L LK LK S Y P+ +VSGS D ++ +W
Sbjct: 303 LRTGAFEPAEATVNAQDLQGS--LKELKERASSRYNLVRGQGPER--LVSGSDDFTLFLW 358
Query: 139 D-VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 197
K L + H ++ V F+ D ++ S+S+D ++WD +G+ L +L
Sbjct: 359 SPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASL-RGHVA 417
Query: 198 PVSFVKFSPNGKYILAATLDNTLKLWDSK 226
V + +S + + +++ + D+TLK+WD K
Sbjct: 418 AVYQIAWSADSRLLVSGSSDSTLKVWDVK 446
Score = 205 (77.2 bits), Expect = 8.7e-16, P = 8.7e-16
Identities = 44/153 (28%), Positives = 81/153 (52%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG-KFEKTISGHKLGISDVAW-- 77
FT GH V S+ +SP+G+ LAS + I +W G + +T++GH I+ ++W
Sbjct: 152 FTCKGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGTQVGRTLTGHSKWITGLSWEP 211
Query: 78 ---SSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 134
+ + R + S S D ++++W+ ++G+C + L GH+ V C + L+ S S D +
Sbjct: 212 LHMNPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDG-LLYSASQDRT 270
Query: 135 VRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSL 167
+++W G +TL H V+ + + D +L
Sbjct: 271 IKVWRAHDGVLCRTLQGHGHWVNTMALSTDYAL 303
Score = 159 (61.0 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 36/129 (27%), Positives = 67/129 (51%)
Query: 102 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHF 161
+C +L+GHS V F+P + SGS D +VR WD+ T T H V ++ +
Sbjct: 107 RCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISW 166
Query: 162 NRDGSLIVSSSYDGLCRIWDTASG-QCLKTLIDDDN--PPVSF--VKFSPNGKYILAATL 216
+ DG + S +G +WD ++G Q +TL +S+ + +P +Y+ +++
Sbjct: 167 SPDGKKLASGCKNGQILLWDPSTGTQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSK 226
Query: 217 DNTLKLWDS 225
D ++++WD+
Sbjct: 227 DGSVRVWDT 235
Score = 131 (51.2 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 26/75 (34%), Positives = 38/75 (50%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
+L GH AV + +S + L S S+D +K+W K + GH + V WS D
Sbjct: 411 SLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLTTDLPGHADEVYAVDWSPDG 470
Query: 82 RLLVSGSDDKTLKIW 96
+ + SG DK L+IW
Sbjct: 471 QRVASGGKDKCLRIW 485
>TAIR|locus:2150788 [details] [associations]
symbol:AT5G08390 "AT5G08390" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0042546 "cell
wall biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0080008
GO:GO:0008352 PANTHER:PTHR19845 OMA:YWERNDI IPI:IPI00533677
RefSeq:NP_568194.2 UniGene:At.10141 UniGene:At.72630
ProteinModelPortal:F4KB17 SMR:F4KB17 PRIDE:F4KB17
EnsemblPlants:AT5G08390.1 GeneID:830737 KEGG:ath:AT5G08390
Uniprot:F4KB17
Length = 839
Score = 290 (107.1 bits), Expect = 1.8e-24, P = 1.8e-24
Identities = 64/212 (30%), Positives = 108/212 (50%)
Query: 17 YVLKFTLAGHTKAVSSVKFS-PNGEWLASSSADKLIKIWGAYDGKFEKTIS--GHKLGIS 73
Y L+ +A H+ AV+ +K + L + D + +W GK +S GH GI
Sbjct: 7 YKLQEFVA-HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAI--GKPNAILSLYGHSSGID 63
Query: 74 DVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 133
V + + L+ +G+ T+K+W+L K ++TL GH + NF+P SGS D
Sbjct: 64 SVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDT 123
Query: 134 SVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 193
+++IWD+R C+ T H+ V+ + F DG IVS D + ++WD +G+ L
Sbjct: 124 NLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKS 183
Query: 194 DDNPPVSFVKFSPNGKYILAA-TLDNTLKLWD 224
+ + + F P+ +++LA + D T+K WD
Sbjct: 184 HEGK-IQSLDFHPH-EFLLATGSADKTVKFWD 213
Score = 276 (102.2 bits), Expect = 5.8e-23, P = 5.8e-23
Identities = 60/205 (29%), Positives = 101/205 (49%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
+L GH+ + SV F + +A+ +A IK+W + K +T++GH+ V +
Sbjct: 54 SLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFG 113
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
SGS D LKIW++ C+ T KGH+ V F P IVSG D V++WD+
Sbjct: 114 EFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLT 173
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 201
GK L +H + ++ F+ L+ + S D + WD + + + + + V
Sbjct: 174 AGKLLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWDLETFELIGSG-GTETTGVRC 232
Query: 202 VKFSPNGKYILAATLDNTLKL--WD 224
+ F+P+GK +L L +LK+ W+
Sbjct: 233 LTFNPDGKSVLCG-LQESLKIFSWE 256
>SGD|S000005261 [details] [associations]
symbol:PFS2 "Subunit of the cleavage and polyadenylation
factor (CPF) complex" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=IDA]
[GO:0006379 "mRNA cleavage" evidence=IMP;IDA] [GO:0006378 "mRNA
polyadenylation" evidence=IMP;IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000005261 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 GO:GO:0006378 EMBL:BK006947 EMBL:Z46259
GO:GO:0005847 GO:GO:0006379 GeneTree:ENSGT00540000070914 KO:K15542
HOGENOM:HOG000213918 OrthoDB:EOG4QVGMD EMBL:Z71593 EMBL:AY693058
PIR:S51295 RefSeq:NP_014082.1 ProteinModelPortal:P42841 SMR:P42841
DIP:DIP-5816N IntAct:P42841 MINT:MINT-381244 STRING:P42841
PaxDb:P42841 PeptideAtlas:P42841 EnsemblFungi:YNL317W GeneID:855399
KEGG:sce:YNL317W CYGD:YNL317w OMA:NGMTFNF NextBio:979220
Genevestigator:P42841 GermOnline:YNL317W Uniprot:P42841
Length = 465
Score = 283 (104.7 bits), Expect = 1.8e-24, P = 1.8e-24
Identities = 64/210 (30%), Positives = 109/210 (51%)
Query: 17 YVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA 76
+ + + H AV+++K+S + +W+ S AD +IKIW ++ + H I D+A
Sbjct: 125 FTFETLMQAHDSAVTTMKYSHDSDWMISGDADGMIKIWQPNFSMVKEIDAAHTESIRDMA 184
Query: 77 WSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 136
+SS+ V+ SDD LKIW S+GK + L GH V C+++P+ LI S S D V+
Sbjct: 185 FSSNDSKFVTCSDDNILKIWNFSNGKQERVLSGHHWDVKSCDWHPEMGLIASASKDNLVK 244
Query: 137 IWDVRTGKCLKTLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD 195
+WD R+G C+ ++ V F G+L+++ S D CR++D + D+
Sbjct: 245 LWDPRSGNCISSILKFKHTVLKTRFQPTKGNLLMAISKDKSCRVFDIRYSMKELMCVRDE 304
Query: 196 NPPVSFVKFSP-NGKYILAATLDNTLKLWD 224
++ +++ P N A D +LK +D
Sbjct: 305 TDYMT-LEWHPINESMFTLACYDGSLKHFD 333
Score = 234 (87.4 bits), Expect = 5.2e-19, P = 5.2e-19
Identities = 53/204 (25%), Positives = 101/204 (49%)
Query: 24 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRL 83
A HT+++ + FS N + S D ++KIW +GK E+ +SGH + W + L
Sbjct: 174 AAHTESIRDMAFSSNDSKFVTCSDDNILKIWNFSNGKQERVLSGHHWDVKSCDWHPEMGL 233
Query: 84 LVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVRT 142
+ S S D +K+W+ SG C+ ++ + V F P + NL+++ S D+S R++D+R
Sbjct: 234 IASASKDNLVKLWDPRSGNCISSILKFKHTVLKTRFQPTKGNLLMAISKDKSCRVFDIRY 293
Query: 143 G-KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG--QCLKTLIDDDNPPV 199
K L + +D ++ + S+ + YDG + +D + + T+ + +
Sbjct: 294 SMKELMCVRDETDYMTLEWHPINESMFTLACYDGSLKHFDLLQNLNEPILTIPYAHDKCI 353
Query: 200 SFVKFSPNGKYILAATLDNTLKLW 223
+ + ++P G A D T++ W
Sbjct: 354 TSLSYNPVGHIFATAAKDRTIRFW 377
Score = 223 (83.6 bits), Expect = 8.4e-18, P = 8.4e-18
Identities = 51/219 (23%), Positives = 104/219 (47%)
Query: 20 KFTLAGHTKA---VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA 76
KFT K + +++++P G L ++ +W A FE + H ++ +
Sbjct: 83 KFTHLSSNKVKHVIPAIQWTPEGRRLVVATYSGEFSLWNASSFTFETLMQAHDSAVTTMK 142
Query: 77 WSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 136
+S DS ++SG D +KIW+ + + H+ + F+ + V+ S D ++
Sbjct: 143 YSHDSDWMISGDADGMIKIWQPNFSMVKEIDAAHTESIRDMAFSSNDSKFVTCSDDNILK 202
Query: 137 IWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 196
IW+ GK + L H V + ++ + LI S+S D L ++WD SG C+ +++ +
Sbjct: 203 IWNFSNGKQERVLSGHHWDVKSCDWHPEMGLIASASKDNLVKLWDPRSGNCISSILKFKH 262
Query: 197 PPVSFVKFSPN-GKYILAATLDNTLKLWDSKVVTPAIIC 234
+ +F P G ++A + D + +++D + ++C
Sbjct: 263 TVLK-TRFQPTKGNLLMAISKDKSCRVFDIRYSMKELMC 300
Score = 131 (51.2 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 39/167 (23%), Positives = 83/167 (49%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS-SDS 81
L+GH V S + P +AS+S D L+K+W G +I K + + +
Sbjct: 215 LSGHHWDVKSCDWHPEMGLIASASKDNLVKLWDPRSGNCISSILKFKHTVLKTRFQPTKG 274
Query: 82 RLLVSGSDDKTLKIWELS-SGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWD 139
LL++ S DK+ +++++ S K L ++ ++Y+ ++P ++ +D S++ +D
Sbjct: 275 NLLMAISKDKSCRVFDIRYSMKELMCVRDETDYM-TLEWHPINESMFTLACYDGSLKHFD 333
Query: 140 V--RTGKCLKTLP-AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA 183
+ + + T+P AH ++++ +N G + +++ D R W A
Sbjct: 334 LLQNLNEPILTIPYAHDKCITSLSYNPVGHIFATAAKDRTIRFWTRA 380
>UNIPROTKB|E2RDC4 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA] [GO:0061136 "regulation of proteasomal
protein catabolic process" evidence=IEA] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945 KO:K03362
OMA:NAYLKPM GeneTree:ENSGT00690000101849 EMBL:AAEX03015480
EMBL:AAEX03015479 RefSeq:XP_543980.3 ProteinModelPortal:E2RDC4
Ensembl:ENSCAFT00000015696 GeneID:486851 KEGG:cfa:486851
NextBio:20860562 Uniprot:E2RDC4
Length = 605
Score = 287 (106.1 bits), Expect = 1.8e-24, P = 1.8e-24
Identities = 65/172 (37%), Positives = 100/172 (58%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L+ L GH AV+ V F + +++ S+S D+ IK+W +F +T++GHK GI+ + +
Sbjct: 418 LRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR 475
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
RL+VSGS D T+++W++ G CL+ L+GH V C F+ + IVSG++D +++W
Sbjct: 476 D--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVW 531
Query: 139 DV--------RTGK-CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181
D+ G CL+TL HS V + F D IVSSS+D IWD
Sbjct: 532 DLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWD 581
Score = 287 (106.1 bits), Expect = 1.8e-24, P = 1.8e-24
Identities = 67/215 (31%), Positives = 116/215 (53%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW---GAYDGKFEKTISGHKLGISDVAWS 78
TL H +AV ++F+ NG + + S D+ I +W D + + GH+ ++ V +
Sbjct: 378 TLIHHCEAVLHLRFN-NG-MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF- 434
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
D + +VS S D+T+K+W S+ + ++TL GH + C + + L+VSGS D ++R+W
Sbjct: 435 -DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLW 491
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT---------ASGQCLK 189
D+ G CL+ L H + V + F D IVS +YDG ++WD A CL+
Sbjct: 492 DIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLR 549
Query: 190 TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
TL++ V ++F I++++ D+T+ +WD
Sbjct: 550 TLVEHSGR-VFRLQFDEF--QIVSSSHDDTILIWD 581
Score = 242 (90.2 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 53/148 (35%), Positives = 88/148 (59%)
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
D + +VSG D T+KIW+ S+ +C + L GH+ V C ++ + +I++GS D +VR+WD
Sbjct: 312 DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDER--VIITGSSDSTVRVWD 369
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ--CLKTLIDDDNP 197
V TG+ L TL H + V + FN ++V+ S D +WD AS L+ ++
Sbjct: 370 VNTGEMLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 427
Query: 198 PVSFVKFSPNGKYILAATLDNTLKLWDS 225
V+ V F + KYI++A+ D T+K+W++
Sbjct: 428 AVNVVDF--DDKYIVSASGDRTIKVWNT 453
Score = 222 (83.2 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 52/186 (27%), Positives = 104/186 (55%)
Query: 42 LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSG 101
+ S D IKIW + ++ ++GH G S + D R++++GS D T+++W++++G
Sbjct: 316 IVSGLRDNTIKIWDKSTLECKRILTGHT-G-SVLCLQYDERVIITGSSDSTVRVWDVNTG 373
Query: 102 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCL---KTLPAHSDPVSA 158
+ L TL H V FN + ++V+ S D S+ +WD+ + + + L H V+
Sbjct: 374 EMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNV 431
Query: 159 VHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN 218
V F D IVS+S D ++W+T++ + ++TL + ++ +++ + +++ + DN
Sbjct: 432 VDF--DDKYIVSASGDRTIKVWNTSTCEFVRTL-NGHKRGIACLQY--RDRLVVSGSSDN 486
Query: 219 TLKLWD 224
T++LWD
Sbjct: 487 TIRLWD 492
Score = 221 (82.9 bits), Expect = 2.6e-17, P = 2.6e-17
Identities = 54/208 (25%), Positives = 109/208 (52%)
Query: 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 79
K L GHT +V +++ + + S+D +++W G+ T+ H + + +++
Sbjct: 336 KRILTGHTGSVLCLQYDERV--IITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNN 393
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCL---KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 136
++V+ S D+++ +W+++S + + L GH V +F+ + IVS S D +++
Sbjct: 394 G--MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIK 449
Query: 137 IWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 196
+W+ T + ++TL H ++ + + RD L+VS S D R+WD G CL+ L +
Sbjct: 450 VWNTSTCEFVRTLNGHKRGIACLQY-RD-RLVVSGSSDNTIRLWDIECGACLRVL-EGHE 506
Query: 197 PPVSFVKFSPNGKYILAATLDNTLKLWD 224
V ++F + K I++ D +K+WD
Sbjct: 507 ELVRCIRF--DNKRIVSGAYDGKIKVWD 532
Score = 148 (57.2 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 41/151 (27%), Positives = 74/151 (49%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GH + ++ +++ + S S+D I++W G + + GH+ + + + D+
Sbjct: 461 TLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DN 516
Query: 82 RLLVSGSDDKTLKIWEL--------SSGK-CLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 132
+ +VSG+ D +K+W+L +G CL+TL HS VF F+ IVS S D
Sbjct: 517 KRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQ--IVSSSHD 574
Query: 133 ESVRIWDVRTGKCLKTLPAHSDPVSAVHFNR 163
+++ IWD + P S + + +R
Sbjct: 575 DTILIWDFLNDPAAQAEPPRSPSRTYTYISR 605
>UNIPROTKB|Q9Y297 [details] [associations]
symbol:BTRC "F-box/WD repeat-containing protein 1A"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0033598
"mammary gland epithelial cell proliferation" evidence=IEA]
[GO:0042753 "positive regulation of circadian rhythm" evidence=IEA]
[GO:0043122 "regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0031648 "protein destabilization" evidence=IMP] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0045862 "positive
regulation of proteolysis" evidence=IMP] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0016032
"viral reproduction" evidence=TAS] [GO:0031145 "anaphase-promoting
complex-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=TAS] [GO:0051437 "positive regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0051439 "regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=TAS] [GO:0045879 "negative regulation of
smoothened signaling pathway" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0045892 Reactome:REACT_115566 GO:GO:0019048 GO:GO:0007165
GO:GO:0045893 GO:GO:0016032 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016874 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0016567
GO:GO:0051726 GO:GO:0043433 GO:GO:0019005 GO:GO:0045862
GO:GO:0000209 GO:GO:0031145 GO:GO:0051437 GO:GO:0071407
Reactome:REACT_24941 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0045879 GO:GO:0042753 PDB:1P22
PDBsum:1P22 EMBL:AL627424 EMBL:AF101784 EMBL:Y14153 EMBL:AF129530
EMBL:GU727631 EMBL:AK313353 EMBL:AL133387 EMBL:AL445463
EMBL:BC027994 IPI:IPI00307418 IPI:IPI00413142 RefSeq:NP_003930.1
RefSeq:NP_378663.1 UniGene:Hs.643802 UniGene:Hs.713753 PDB:2P64
PDBsum:2P64 ProteinModelPortal:Q9Y297 SMR:Q9Y297 DIP:DIP-31607N
IntAct:Q9Y297 MINT:MINT-108636 STRING:Q9Y297 PhosphoSite:Q9Y297
DMDM:13124271 PRIDE:Q9Y297 DNASU:8945 Ensembl:ENST00000370187
Ensembl:ENST00000408038 GeneID:8945 KEGG:hsa:8945 UCSC:uc001kta.3
UCSC:uc001ktb.3 CTD:8945 GeneCards:GC10P103103 HGNC:HGNC:1144
HPA:CAB032986 MIM:603482 neXtProt:NX_Q9Y297 PharmGKB:PA25465
HOGENOM:HOG000006638 HOVERGEN:HBG002521 InParanoid:Q9Y297 KO:K03362
OMA:NAYLKPM OrthoDB:EOG4F1X2M PhylomeDB:Q9Y297 ChiTaRS:BTRC
EvolutionaryTrace:Q9Y297 GenomeRNAi:8945 NextBio:33645
ArrayExpress:Q9Y297 Bgee:Q9Y297 CleanEx:HS_BTRC
Genevestigator:Q9Y297 Uniprot:Q9Y297
Length = 605
Score = 287 (106.1 bits), Expect = 1.8e-24, P = 1.8e-24
Identities = 65/172 (37%), Positives = 100/172 (58%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L+ L GH AV+ V F + +++ S+S D+ IK+W +F +T++GHK GI+ + +
Sbjct: 418 LRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR 475
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
RL+VSGS D T+++W++ G CL+ L+GH V C F+ + IVSG++D +++W
Sbjct: 476 D--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVW 531
Query: 139 DV--------RTGK-CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181
D+ G CL+TL HS V + F D IVSSS+D IWD
Sbjct: 532 DLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWD 581
Score = 287 (106.1 bits), Expect = 1.8e-24, P = 1.8e-24
Identities = 67/215 (31%), Positives = 116/215 (53%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW---GAYDGKFEKTISGHKLGISDVAWS 78
TL H +AV ++F+ NG + + S D+ I +W D + + GH+ ++ V +
Sbjct: 378 TLIHHCEAVLHLRFN-NG-MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF- 434
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
D + +VS S D+T+K+W S+ + ++TL GH + C + + L+VSGS D ++R+W
Sbjct: 435 -DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLW 491
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT---------ASGQCLK 189
D+ G CL+ L H + V + F D IVS +YDG ++WD A CL+
Sbjct: 492 DIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLR 549
Query: 190 TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
TL++ V ++F I++++ D+T+ +WD
Sbjct: 550 TLVEHSGR-VFRLQFDEF--QIVSSSHDDTILIWD 581
Score = 239 (89.2 bits), Expect = 2.9e-19, P = 2.9e-19
Identities = 52/148 (35%), Positives = 88/148 (59%)
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
D + +VSG D T+KIW+ ++ +C + L GH+ V C ++ + +I++GS D +VR+WD
Sbjct: 312 DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDER--VIITGSSDSTVRVWD 369
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ--CLKTLIDDDNP 197
V TG+ L TL H + V + FN ++V+ S D +WD AS L+ ++
Sbjct: 370 VNTGEMLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 427
Query: 198 PVSFVKFSPNGKYILAATLDNTLKLWDS 225
V+ V F + KYI++A+ D T+K+W++
Sbjct: 428 AVNVVDF--DDKYIVSASGDRTIKVWNT 453
Score = 222 (83.2 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 52/186 (27%), Positives = 104/186 (55%)
Query: 42 LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSG 101
+ S D IKIW + ++ ++GH G S + D R++++GS D T+++W++++G
Sbjct: 316 IVSGLRDNTIKIWDKNTLECKRILTGHT-G-SVLCLQYDERVIITGSSDSTVRVWDVNTG 373
Query: 102 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCL---KTLPAHSDPVSA 158
+ L TL H V FN + ++V+ S D S+ +WD+ + + + L H V+
Sbjct: 374 EMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNV 431
Query: 159 VHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN 218
V F D IVS+S D ++W+T++ + ++TL + ++ +++ + +++ + DN
Sbjct: 432 VDF--DDKYIVSASGDRTIKVWNTSTCEFVRTL-NGHKRGIACLQY--RDRLVVSGSSDN 486
Query: 219 TLKLWD 224
T++LWD
Sbjct: 487 TIRLWD 492
Score = 221 (82.9 bits), Expect = 2.6e-17, P = 2.6e-17
Identities = 54/208 (25%), Positives = 109/208 (52%)
Query: 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 79
K L GHT +V +++ + + S+D +++W G+ T+ H + + +++
Sbjct: 336 KRILTGHTGSVLCLQYDERV--IITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNN 393
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCL---KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 136
++V+ S D+++ +W+++S + + L GH V +F+ + IVS S D +++
Sbjct: 394 G--MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIK 449
Query: 137 IWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 196
+W+ T + ++TL H ++ + + RD L+VS S D R+WD G CL+ L +
Sbjct: 450 VWNTSTCEFVRTLNGHKRGIACLQY-RD-RLVVSGSSDNTIRLWDIECGACLRVL-EGHE 506
Query: 197 PPVSFVKFSPNGKYILAATLDNTLKLWD 224
V ++F + K I++ D +K+WD
Sbjct: 507 ELVRCIRF--DNKRIVSGAYDGKIKVWD 532
Score = 148 (57.2 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 41/151 (27%), Positives = 74/151 (49%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GH + ++ +++ + S S+D I++W G + + GH+ + + + D+
Sbjct: 461 TLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DN 516
Query: 82 RLLVSGSDDKTLKIWEL--------SSGK-CLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 132
+ +VSG+ D +K+W+L +G CL+TL HS VF F+ IVS S D
Sbjct: 517 KRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQ--IVSSSHD 574
Query: 133 ESVRIWDVRTGKCLKTLPAHSDPVSAVHFNR 163
+++ IWD + P S + + +R
Sbjct: 575 DTILIWDFLNDPAAQAEPPRSPSRTYTYISR 605
>UNIPROTKB|F1NYG1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0006470
"protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0042753 OMA:NAYLKPM GeneTree:ENSGT00690000101849
EMBL:AADN02046404 IPI:IPI00684527 Ensembl:ENSGALT00000033197
Uniprot:F1NYG1
Length = 605
Score = 287 (106.1 bits), Expect = 1.8e-24, P = 1.8e-24
Identities = 65/172 (37%), Positives = 100/172 (58%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L+ L GH AV+ V F + +++ S+S D+ IK+W +F +T++GHK GI+ + +
Sbjct: 418 LRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR 475
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
RL+VSGS D T+++W++ G CL+ L+GH V C F+ + IVSG++D +++W
Sbjct: 476 D--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVW 531
Query: 139 DV--------RTGK-CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181
D+ G CL+TL HS V + F D IVSSS+D IWD
Sbjct: 532 DLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWD 581
Score = 287 (106.1 bits), Expect = 1.8e-24, P = 1.8e-24
Identities = 67/215 (31%), Positives = 116/215 (53%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW---GAYDGKFEKTISGHKLGISDVAWS 78
TL H +AV ++F+ NG + + S D+ I +W D + + GH+ ++ V +
Sbjct: 378 TLIHHCEAVLHLRFN-NG-MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF- 434
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
D + +VS S D+T+K+W S+ + ++TL GH + C + + L+VSGS D ++R+W
Sbjct: 435 -DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLW 491
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT---------ASGQCLK 189
D+ G CL+ L H + V + F D IVS +YDG ++WD A CL+
Sbjct: 492 DIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLR 549
Query: 190 TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
TL++ V ++F I++++ D+T+ +WD
Sbjct: 550 TLVEHSGR-VFRLQFDEF--QIVSSSHDDTILIWD 581
Score = 234 (87.4 bits), Expect = 1.0e-18, P = 1.0e-18
Identities = 51/148 (34%), Positives = 87/148 (58%)
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
D + +VSG D T+KIW+ ++ +C + L GH+ V C ++ + +I++GS D +VR+WD
Sbjct: 312 DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDER--VIITGSSDSTVRVWD 369
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ--CLKTLIDDDNP 197
V G+ L TL H + V + FN ++V+ S D +WD AS L+ ++
Sbjct: 370 VNAGEMLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 427
Query: 198 PVSFVKFSPNGKYILAATLDNTLKLWDS 225
V+ V F + KYI++A+ D T+K+W++
Sbjct: 428 AVNVVDF--DDKYIVSASGDRTIKVWNT 453
Score = 222 (83.2 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 52/186 (27%), Positives = 104/186 (55%)
Query: 42 LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSG 101
+ S D IKIW + ++ ++GH G S + D R++++GS D T+++W++++G
Sbjct: 316 IVSGLRDNTIKIWDKNTLECKRILTGHT-G-SVLCLQYDERVIITGSSDSTVRVWDVNAG 373
Query: 102 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCL---KTLPAHSDPVSA 158
+ L TL H V FN + ++V+ S D S+ +WD+ + + + L H V+
Sbjct: 374 EMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNV 431
Query: 159 VHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN 218
V F D IVS+S D ++W+T++ + ++TL + ++ +++ + +++ + DN
Sbjct: 432 VDF--DDKYIVSASGDRTIKVWNTSTCEFVRTL-NGHKRGIACLQY--RDRLVVSGSSDN 486
Query: 219 TLKLWD 224
T++LWD
Sbjct: 487 TIRLWD 492
Score = 220 (82.5 bits), Expect = 3.3e-17, P = 3.3e-17
Identities = 54/208 (25%), Positives = 109/208 (52%)
Query: 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 79
K L GHT +V +++ + + S+D +++W G+ T+ H + + +++
Sbjct: 336 KRILTGHTGSVLCLQYDERV--IITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNN 393
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCL---KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 136
++V+ S D+++ +W+++S + + L GH V +F+ + IVS S D +++
Sbjct: 394 G--MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIK 449
Query: 137 IWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 196
+W+ T + ++TL H ++ + + RD L+VS S D R+WD G CL+ L +
Sbjct: 450 VWNTSTCEFVRTLNGHKRGIACLQY-RD-RLVVSGSSDNTIRLWDIECGACLRVL-EGHE 506
Query: 197 PPVSFVKFSPNGKYILAATLDNTLKLWD 224
V ++F + K I++ D +K+WD
Sbjct: 507 ELVRCIRF--DNKRIVSGAYDGKIKVWD 532
>GENEDB_PFALCIPARUM|PFC0100c [details] [associations]
symbol:PFC0100c "regulatory protein, putative"
species:5833 "Plasmodium falciparum" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
EMBL:AL844502 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_001351097.1
ProteinModelPortal:O97334 IntAct:O97334 MINT:MINT-1755911
EnsemblProtists:PFC0100c:mRNA GeneID:814338 KEGG:pfa:PFC0100c
EuPathDB:PlasmoDB:PF3D7_0302000 OMA:GHINSIR ProtClustDB:CLSZ2733686
Uniprot:O97334
Length = 600
Score = 286 (105.7 bits), Expect = 2.3e-24, P = 2.3e-24
Identities = 62/207 (29%), Positives = 103/207 (49%)
Query: 17 YVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA 76
Y L + GH+ V+ V + EW A+ S D+LIKIW K + T++GH I D+
Sbjct: 276 YKLYRVILGHSGWVNCVDVDISNEWFATGSNDRLIKIWDLASCKLKLTLTGHINSIRDIK 335
Query: 77 WSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 136
S + L S +D +K W+L K ++ GH + V+C + +P +L++SG D VR
Sbjct: 336 ISKKNPYLFSCGEDNRVKCWDLEYNKVIRDYHGHLSGVYCLSLHPSLDLLMSGGRDAVVR 395
Query: 137 IWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 196
+WD+RT + L H+ V ++ +VS S D + R+WD +G+C + +
Sbjct: 396 VWDIRTKSSVFVLSGHTGTVMSICSQSVEPQVVSGSQDKMIRLWDLNNGKC-RISLTHHK 454
Query: 197 PPVSFVKFSPNGKYILAATLDNTLKLW 223
+ + P + DN +K+W
Sbjct: 455 KSIRSLSIHPFEYSFCSCGTDN-VKVW 480
Score = 168 (64.2 bits), Expect = 7.8e-11, P = 7.8e-11
Identities = 49/221 (22%), Positives = 99/221 (44%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLL 84
GH V + P+ + L S D ++++W +SGH + + S +
Sbjct: 368 GHLSGVYCLSLHPSLDLLMSGGRDAVVRVWDIRTKSSVFVLSGHTGTVMSICSQSVEPQV 427
Query: 85 VSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK 144
VSGS DK +++W+L++GKC +L H + + +P S D +V++W +
Sbjct: 428 VSGSQDKMIRLWDLNNGKCRISLTHHKKSIRSLSIHPFEYSFCSCGTD-NVKVWCGADAE 486
Query: 145 CLKTLPAHSDPVSAV------HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL------- 191
+ + + ++ +FN D S+++ S +G +D +SG TL
Sbjct: 487 FDRNITGFNSIINCSLIKQDPYFN-DSSILILGSNNGQLHFYDWSSGYKYDTLSNKVVPG 545
Query: 192 -IDDDNPPVSFVKFSPNGKYILAATLDNTLKLW-DSKVVTP 230
++ +N +S F + ++ D ++K+W +++ TP
Sbjct: 546 TVECENSTLSMA-FDKSESRLITTHGDKSIKIWKENEDATP 585
>UNIPROTKB|O97334 [details] [associations]
symbol:PFC0100c "Regulatory protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
EMBL:AL844502 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_001351097.1
ProteinModelPortal:O97334 IntAct:O97334 MINT:MINT-1755911
EnsemblProtists:PFC0100c:mRNA GeneID:814338 KEGG:pfa:PFC0100c
EuPathDB:PlasmoDB:PF3D7_0302000 OMA:GHINSIR ProtClustDB:CLSZ2733686
Uniprot:O97334
Length = 600
Score = 286 (105.7 bits), Expect = 2.3e-24, P = 2.3e-24
Identities = 62/207 (29%), Positives = 103/207 (49%)
Query: 17 YVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA 76
Y L + GH+ V+ V + EW A+ S D+LIKIW K + T++GH I D+
Sbjct: 276 YKLYRVILGHSGWVNCVDVDISNEWFATGSNDRLIKIWDLASCKLKLTLTGHINSIRDIK 335
Query: 77 WSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 136
S + L S +D +K W+L K ++ GH + V+C + +P +L++SG D VR
Sbjct: 336 ISKKNPYLFSCGEDNRVKCWDLEYNKVIRDYHGHLSGVYCLSLHPSLDLLMSGGRDAVVR 395
Query: 137 IWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 196
+WD+RT + L H+ V ++ +VS S D + R+WD +G+C + +
Sbjct: 396 VWDIRTKSSVFVLSGHTGTVMSICSQSVEPQVVSGSQDKMIRLWDLNNGKC-RISLTHHK 454
Query: 197 PPVSFVKFSPNGKYILAATLDNTLKLW 223
+ + P + DN +K+W
Sbjct: 455 KSIRSLSIHPFEYSFCSCGTDN-VKVW 480
Score = 168 (64.2 bits), Expect = 7.8e-11, P = 7.8e-11
Identities = 49/221 (22%), Positives = 99/221 (44%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLL 84
GH V + P+ + L S D ++++W +SGH + + S +
Sbjct: 368 GHLSGVYCLSLHPSLDLLMSGGRDAVVRVWDIRTKSSVFVLSGHTGTVMSICSQSVEPQV 427
Query: 85 VSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK 144
VSGS DK +++W+L++GKC +L H + + +P S D +V++W +
Sbjct: 428 VSGSQDKMIRLWDLNNGKCRISLTHHKKSIRSLSIHPFEYSFCSCGTD-NVKVWCGADAE 486
Query: 145 CLKTLPAHSDPVSAV------HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL------- 191
+ + + ++ +FN D S+++ S +G +D +SG TL
Sbjct: 487 FDRNITGFNSIINCSLIKQDPYFN-DSSILILGSNNGQLHFYDWSSGYKYDTLSNKVVPG 545
Query: 192 -IDDDNPPVSFVKFSPNGKYILAATLDNTLKLW-DSKVVTP 230
++ +N +S F + ++ D ++K+W +++ TP
Sbjct: 546 TVECENSTLSMA-FDKSESRLITTHGDKSIKIWKENEDATP 585
>FB|FBgn0039067 [details] [associations]
symbol:wda "will decrease acetylation" species:7227
"Drosophila melanogaster" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043970 "histone H3-K9
acetylation" evidence=IMP] [GO:0000124 "SAGA complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014297 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0000124
GeneTree:ENSGT00700000104377 KO:K03130 HSSP:Q02793 EMBL:AY118904
RefSeq:NP_651136.1 UniGene:Dm.13737 SMR:Q9VCN9 STRING:Q9VCN9
EnsemblMetazoa:FBtr0084387 GeneID:42750 KEGG:dme:Dmel_CG4448
UCSC:CG4448-RA CTD:42750 FlyBase:FBgn0039067 InParanoid:Q9VCN9
OMA:LWCATSG OrthoDB:EOG49W0WQ GenomeRNAi:42750 NextBio:830376
Uniprot:Q9VCN9
Length = 743
Score = 288 (106.4 bits), Expect = 2.4e-24, P = 2.4e-24
Identities = 65/210 (30%), Positives = 108/210 (51%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 80
F L GHTK V+ V+FS + + S S D ++ W A++ H I + S
Sbjct: 491 FQLRGHTKGVTDVRFSAHYPLMYSVSKDATMRCWRAHNLHCAAIYRSHNYPIWCLDESPV 550
Query: 81 SRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 140
+ +V+GS D + ++W L L GH+ V C F+P N I +GS D SVR+W
Sbjct: 551 GQYVVTGSKDLSARLWSLEKEHALIIYAGHTQDVECVAFHPNGNYIATGSADHSVRLWCA 610
Query: 141 RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 200
+GK ++ V+ + F+ DG ++ ++ + RI+D A+G L L D + +S
Sbjct: 611 TSGKLMRVFADCRQAVTQLAFSPDGKMLAAAGEETKVRIFDLAAGAQLAEL-KDHSASIS 669
Query: 201 FVKFSPNGKYILAATLDNTLKLWDSKVVTP 230
+ +S + +++ A D TL+LWD K ++P
Sbjct: 670 SLSWSTHNRHLATACSDGTLRLWDIKKLSP 699
>FB|FBgn0027524 [details] [associations]
symbol:CG3909 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GeneTree:ENSGT00700000104507 KO:K12602 EMBL:AF132174
RefSeq:NP_649969.1 UniGene:Dm.3198 SMR:Q9XZ19 IntAct:Q9XZ19
MINT:MINT-1753051 STRING:Q9XZ19 EnsemblMetazoa:FBtr0082172
GeneID:41226 KEGG:dme:Dmel_CG3909 UCSC:CG3909-RA
FlyBase:FBgn0027524 InParanoid:Q9XZ19 OMA:HETWVEC OrthoDB:EOG4R7SSH
GenomeRNAi:41226 NextBio:822821 Uniprot:Q9XZ19
Length = 331
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 62/208 (29%), Positives = 115/208 (55%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
L+ L GH V SV S +G+ +ASSS D + +W A G + +S + + V +S
Sbjct: 77 LRHKLKGHALGVVSVAVSSDGQTIASSSLDSTMCLWDARSGDKKHLLSFGPVDLWTVQFS 136
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSN-YVFCCNFNPQSNLIVSGSFDESVRI 137
++ ++SG +D + ++ + +GK +TL + Y ++P I SG+ D + I
Sbjct: 137 PCNKYVISGLNDGKISMYSVETGKAEQTLDAQNGKYTLSIAYSPDGKYIASGAIDGIITI 196
Query: 138 WDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 197
+DV GK ++TL H+ PV ++ F+ + L++++S DG +++D + TL +
Sbjct: 197 FDVAAGKVVQTLEGHAMPVRSLCFSPNSQLLLTASDDGHMKLYDVTHSDVVGTLSGHASW 256
Query: 198 PVSFVKFSPNGKYILAATLDNTLKLWDS 225
V V FS +GK+ +++ DN++K+WD+
Sbjct: 257 -VLCVAFSEDGKHFASSSSDNSVKIWDT 283
Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 61/194 (31%), Positives = 110/194 (56%)
Query: 32 SVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH--KLGISDVAWSSDSRLLVSGSD 89
+V+FSP +++ S D I ++ GK E+T+ K +S +A+S D + + SG+
Sbjct: 132 TVQFSPCNKYVISGLNDGKISMYSVETGKAEQTLDAQNGKYTLS-IAYSPDGKYIASGAI 190
Query: 90 DKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTL 149
D + I+++++GK ++TL+GH+ V F+P S L+++ S D ++++DV + TL
Sbjct: 191 DGIITIFDVAAGKVVQTLEGHAMPVRSLCFSPNSQLLLTASDDGHMKLYDVTHSDVVGTL 250
Query: 150 PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK 209
H+ V V F+ DG SSS D +IWDT+ +CL T + + V V++SP
Sbjct: 251 SGHASWVLCVAFSEDGKHFASSSSDNSVKIWDTSERKCLHTFAEHTDQ-VWGVRYSPGND 309
Query: 210 YILAATLDNTLKLW 223
+ +A+ D +L ++
Sbjct: 310 KVASASEDKSLNIY 323
Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 51/157 (32%), Positives = 89/157 (56%)
Query: 24 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRL 83
A + K S+ +SP+G+++AS + D +I I+ GK +T+ GH + + + +S +S+L
Sbjct: 167 AQNGKYTLSIAYSPDGKYIASGAIDGIITIFDVAAGKVVQTLEGHAMPVRSLCFSPNSQL 226
Query: 84 LVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 143
L++ SDD +K+++++ + TL GH+++V C F+ S S D SV+IWD
Sbjct: 227 LLTASDDGHMKLYDVTHSDVVGTLSGHASWVLCVAFSEDGKHFASSSSDNSVKIWDTSER 286
Query: 144 KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 180
KCL T H+D V V ++ + S+S D I+
Sbjct: 287 KCLHTFAEHTDQVWGVRYSPGNDKVASASEDKSLNIY 323
Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 59/189 (31%), Positives = 102/189 (53%)
Query: 40 EWLASSSADKLIKIWGAYDG---KFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIW 96
++L + D L+K+W + K + GH LG+ VA SSD + + S S D T+ +W
Sbjct: 53 DFLVTGGLDDLVKVWDLQEDNTLKLRHKLKGHALGVVSVAVSSDGQTIASSSLDSTMCLW 112
Query: 97 ELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPV 156
+ SG L ++ F+P + ++SG D + ++ V TGK +TL A +
Sbjct: 113 DARSGDKKHLLSFGPVDLWTVQFSPCNKYVISGLNDGKISMYSVETGKAEQTLDAQNGKY 172
Query: 157 S-AVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT 215
+ ++ ++ DG I S + DG+ I+D A+G+ ++TL + PV + FSPN + +L A+
Sbjct: 173 TLSIAYSPDGKYIASGAIDGIITIFDVAAGKVVQTL-EGHAMPVRSLCFSPNSQLLLTAS 231
Query: 216 LDNTLKLWD 224
D +KL+D
Sbjct: 232 DDGHMKLYD 240
Score = 195 (73.7 bits), Expect = 3.2e-15, P = 3.2e-15
Identities = 41/117 (35%), Positives = 66/117 (56%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL GH V S+ FSPN + L ++S D +K++ T+SGH + VA+S D
Sbjct: 207 TLEGHAMPVRSLCFSPNSQLLLTASDDGHMKLYDVTHSDVVGTLSGHASWVLCVAFSEDG 266
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
+ S S D ++KIW+ S KCL T H++ V+ ++P ++ + S S D+S+ I+
Sbjct: 267 KHFASSSSDNSVKIWDTSERKCLHTFAEHTDQVWGVRYSPGNDKVASASEDKSLNIY 323
>TAIR|locus:2176897 [details] [associations]
symbol:AT5G52820 "AT5G52820" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AB009055 HSSP:P16649
InterPro:IPR011044 SUPFAM:SSF50969 PRINTS:PR00319 GO:GO:0080008
EMBL:AK227330 EMBL:BT004562 IPI:IPI00528132 RefSeq:NP_200094.1
UniGene:At.29592 ProteinModelPortal:Q9FLX9 SMR:Q9FLX9 STRING:Q9FLX9
PaxDb:Q9FLX9 PRIDE:Q9FLX9 EnsemblPlants:AT5G52820.1 GeneID:835359
KEGG:ath:AT5G52820 GeneFarm:3344 TAIR:At5g52820
HOGENOM:HOG000091641 InParanoid:Q9FLX9 KO:K14855 OMA:HFTCKGH
PhylomeDB:Q9FLX9 ProtClustDB:CLSN2686131 Genevestigator:Q9FLX9
InterPro:IPR012972 Pfam:PF08154 Uniprot:Q9FLX9
Length = 473
Score = 282 (104.3 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 51/119 (42%), Positives = 77/119 (64%)
Query: 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 79
K L GH + V+ V FSP+G+W+AS+S DK +++W G+F GH + V+WS+
Sbjct: 353 KKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSA 412
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
DSRLL+SGS D TLKIWE+ + K + L GH++ VF +++P +VSG D +++W
Sbjct: 413 DSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVVSGGKDRVLKLW 471
Score = 251 (93.4 bits), Expect = 7.4e-21, P = 7.4e-21
Identities = 59/176 (33%), Positives = 89/176 (50%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
T+AGH +AV V FSP+G+ LAS S D +++W Y T GHK + VAWS D
Sbjct: 104 TIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDG 163
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKT-LKGHSNYVFCCNFNP-----QSNLIVSGSFDESV 135
+ LVSGS + W G+ + L GH ++ ++ P V+ S D
Sbjct: 164 KHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSKDGDA 223
Query: 136 RIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 191
RIWD+ K + L H+ V+ V + DG +I + S D ++W+T G+ ++ L
Sbjct: 224 RIWDITLKKSIICLSGHTLAVTCVKWGGDG-IIYTGSQDCTIKMWETTQGKLIREL 278
Score = 227 (85.0 bits), Expect = 3.2e-18, P = 3.2e-18
Identities = 46/142 (32%), Positives = 84/142 (59%)
Query: 40 EWLASSSADKLIKIWGAYDGKF-EKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWEL 98
E L S S D + +W K +K ++GH+ ++ V +S D + + S S DK++++W
Sbjct: 330 ERLVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNG 389
Query: 99 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSA 158
+G+ + +GH V+ +++ S L++SGS D +++IW++RT K + LP H+D V A
Sbjct: 390 ITGQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFA 449
Query: 159 VHFNRDGSLIVSSSYDGLCRIW 180
V ++ DG +VS D + ++W
Sbjct: 450 VDWSPDGEKVVSGGKDRVLKLW 471
Score = 222 (83.2 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 53/141 (37%), Positives = 76/141 (53%)
Query: 84 LVSGSDDKTLKIWELSSGKC-LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 142
LVSGSDD T+ +WE S K K L GH V F+P I S SFD+SVR+W+ T
Sbjct: 332 LVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGIT 391
Query: 143 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 202
G+ + H PV V ++ D L++S S D +IW+ + + LK + V V
Sbjct: 392 GQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKK-LKQDLPGHADEVFAV 450
Query: 203 KFSPNGKYILAATLDNTLKLW 223
+SP+G+ +++ D LKLW
Sbjct: 451 DWSPDGEKVVSGGKDRVLKLW 471
Score = 218 (81.8 bits), Expect = 3.1e-17, P = 3.1e-17
Identities = 63/203 (31%), Positives = 111/203 (54%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
L+GHT AV+ VK+ +G + + S D IK+W GK + + GH I+ +A S++
Sbjct: 237 LSGHTLAVTCVKWGGDGI-IYTGSQDCTIKMWETTQGKLIRELKGHGHWINSLALSTEY- 294
Query: 83 LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 142
+L +G+ D T + + + K K L+ ++ +P+ +VSGS D ++ +W+
Sbjct: 295 VLRTGAFDHTGRQYPPNEEK-QKALERYNKTK---GDSPER--LVSGSDDFTMFLWEPSV 348
Query: 143 GKC-LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 201
K K L H V+ V+F+ DG I S+S+D R+W+ +GQ + T+ PV
Sbjct: 349 SKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFV-TVFRGHVGPVYQ 407
Query: 202 VKFSPNGKYILAATLDNTLKLWD 224
V +S + + +L+ + D+TLK+W+
Sbjct: 408 VSWSADSRLLLSGSKDSTLKIWE 430
Score = 205 (77.2 bits), Expect = 8.2e-16, P = 8.2e-16
Identities = 56/207 (27%), Positives = 101/207 (48%)
Query: 23 LAGHTKAVSSVKFSPNG-----EWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW 77
L GH K ++ + + P +SS D +IW K +SGH L ++ V W
Sbjct: 190 LTGHKKWITGISWEPVHLSSPCRRFVTSSKDGDARIWDITLKKSIICLSGHTLAVTCVKW 249
Query: 78 SSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 137
D ++ +GS D T+K+WE + GK ++ LKGH +++ + + ++ +G+FD + R
Sbjct: 250 GGDG-IIYTGSQDCTIKMWETTQGKLIRELKGHGHWINSLALSTEY-VLRTGAFDHTGRQ 307
Query: 138 WDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 197
+ K K L ++ +VS S D +W+ + + K +
Sbjct: 308 YPPNEEK-QKALERYNKTKGD-----SPERLVSGSDDFTMFLWEPSVSKQPKKRLTGHQQ 361
Query: 198 PVSFVKFSPNGKYILAATLDNTLKLWD 224
V+ V FSP+GK+I +A+ D +++LW+
Sbjct: 362 LVNHVYFSPDGKWIASASFDKSVRLWN 388
Score = 198 (74.8 bits), Expect = 4.7e-15, P = 4.7e-15
Identities = 52/169 (30%), Positives = 86/169 (50%)
Query: 63 KTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQ 122
+TI+GH + V++S D + L SGS D T+++W+L + L T KGH N+V ++P
Sbjct: 103 QTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPD 162
Query: 123 SNLIVSGSFDESVRIWDVRTGKCLKT-LPAHSDPVSA-----VHFNRDGSLIVSSSYDGL 176
+VSGS + W+ + G+ + L H ++ VH + V+SS DG
Sbjct: 163 GKHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSKDGD 222
Query: 177 CRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225
RIWD + + L V+ VK+ +G I + D T+K+W++
Sbjct: 223 ARIWDITLKKSIICL-SGHTLAVTCVKWGGDG-IIYTGSQDCTIKMWET 269
Score = 189 (71.6 bits), Expect = 4.5e-14, P = 4.5e-14
Identities = 44/145 (30%), Positives = 76/145 (52%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT-ISGHKLGISDVAW-- 77
FT GH V +V +SP+G+ L S S I W G+ E + ++GHK I+ ++W
Sbjct: 145 FTCKGHKNWVLTVAWSPDGKHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEP 204
Query: 78 ---SSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 134
SS R V+ S D +IW+++ K + L GH+ V C + +I +GS D +
Sbjct: 205 VHLSSPCRRFVTSSKDGDARIWDITLKKSIICLSGHTLAVTCVKWGGDG-IIYTGSQDCT 263
Query: 135 VRIWDVRTGKCLKTLPAHSDPVSAV 159
+++W+ GK ++ L H ++++
Sbjct: 264 IKMWETTQGKLIRELKGHGHWINSL 288
Score = 157 (60.3 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 37/138 (26%), Positives = 67/138 (48%)
Query: 102 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHF 161
+C +T+ GH+ V C +F+P + SGS D +VR+WD+ T L T H + V V +
Sbjct: 100 RCSQTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAW 159
Query: 162 NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG-----KYILAATL 216
+ DG +VS S G W+ G+ + + ++ + + P + + ++
Sbjct: 160 SPDGKHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSK 219
Query: 217 DNTLKLWDSKVVTPAIIC 234
D ++WD + +IIC
Sbjct: 220 DGDARIWDI-TLKKSIIC 236
Score = 127 (49.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 26/73 (35%), Positives = 37/73 (50%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLL 84
GH V V +S + L S S D +KIW K ++ + GH + V WS D +
Sbjct: 400 GHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKV 459
Query: 85 VSGSDDKTLKIWE 97
VSG D+ LK+W+
Sbjct: 460 VSGGKDRVLKLWK 472
>DICTYBASE|DDB_G0295761 [details] [associations]
symbol:nle1 "putative notchless" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0295761 InterPro:IPR001632
GO:GO:0005634 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 PRINTS:PR00319
KO:K14855 OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154
RefSeq:XP_002649195.1 ProteinModelPortal:C7FZX3
EnsemblProtists:DDB0252725 GeneID:8616962 KEGG:ddi:DDB_G0295761
Uniprot:C7FZX3
Length = 507
Score = 283 (104.7 bits), Expect = 2.8e-24, P = 2.8e-24
Identities = 54/118 (45%), Positives = 74/118 (62%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
L GH + ++ V FSP+G + AS+S DK IK+W GKF GH + V WSSDSR
Sbjct: 390 LTGHQQLINLVSFSPDGRYFASASFDKSIKLWDGQSGKFLGNFRGHVGAVYQVCWSSDSR 449
Query: 83 LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 140
LVSGS D TLKIW++ + K K L GH++ V+ +++P + + SGS D +RIW V
Sbjct: 450 YLVSGSKDSTLKIWDIKTKKMEKELPGHADEVYTVDWSPDGDRVASGSKDRLLRIWTV 507
Score = 268 (99.4 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 66/211 (31%), Positives = 113/211 (53%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
+++GHT+AV + FSP+G+ S D ++IW Y T+ GH + VAWS DS
Sbjct: 135 SMSGHTEAVLNCAFSPDGKGFVSVGGDTTVRIWDIYTSTPTHTLKGHTNWVLQVAWSPDS 194
Query: 82 RLLVSGSDDKTLKIWELSSGKCL-KTLKGHSNYVFCCNF-----NPQSNLIVSGSFDESV 135
+ + + + ++IW +GK L TLKGH+ ++ ++ NP+ + S S D ++
Sbjct: 195 KKIATAGMEGDIRIWCPQTGKQLGSTLKGHTKFITGLSWEPFHLNPKCVRLASSSKDSTI 254
Query: 136 RIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD 195
RIWD + K L +L H+ V+ + + +G LI S S D R+++T G+ ++ L D
Sbjct: 255 RIWDTESCKNLMSLSGHTMSVTCLKWGGEG-LIYSGSQDRTVRVFNTTDGRLVRVL-DGH 312
Query: 196 NPPVSFVKFSPNGKYIL-AATLDNTLKLWDS 225
V+ + N Y+L + D+T K +D+
Sbjct: 313 AHWVNTLAL--NTDYVLRTGSYDHTGKEYDT 341
Score = 249 (92.7 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 57/152 (37%), Positives = 84/152 (55%)
Query: 31 SSVKFSPNG-EWLASSSADKLIKIWGAYDGKFE-KTISGHKLGISDVAWSSDSRLLVSGS 88
+ VK G E L S S D + +W K ++GH+ I+ V++S D R S S
Sbjct: 354 NDVKAKSKGMEILISGSDDFTVIMWNPSVTKTSISRLTGHQQLINLVSFSPDGRYFASAS 413
Query: 89 DDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKT 148
DK++K+W+ SGK L +GH V+ ++ S +VSGS D +++IWD++T K K
Sbjct: 414 FDKSIKLWDGQSGKFLGNFRGHVGAVYQVCWSSDSRYLVSGSKDSTLKIWDIKTKKMEKE 473
Query: 149 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 180
LP H+D V V ++ DG + S S D L RIW
Sbjct: 474 LPGHADEVYTVDWSPDGDRVASGSKDRLLRIW 505
Score = 245 (91.3 bits), Expect = 4.2e-20, P = 4.2e-20
Identities = 58/210 (27%), Positives = 113/210 (53%)
Query: 22 TLAGHTKAVSSVKFSP---NGEW--LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA 76
TL GHTK ++ + + P N + LASSS D I+IW K ++SGH + ++ +
Sbjct: 220 TLKGHTKFITGLSWEPFHLNPKCVRLASSSKDSTIRIWDTESCKNLMSLSGHTMSVTCLK 279
Query: 77 WSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 136
W + L+ SGS D+T++++ + G+ ++ L GH+++V N ++ +GS+D + +
Sbjct: 280 WGGEG-LIYSGSQDRTVRVFNTTDGRLVRVLDGHAHWVNTLALNTDY-VLRTGSYDHTGK 337
Query: 137 IWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 196
+D L ++D V A ++ +++S S D +W+ + + + +
Sbjct: 338 EYDTLEEAQRVALERYND-VKAK--SKGMEILISGSDDFTVIMWNPSVTKTSISRLTGHQ 394
Query: 197 PPVSFVKFSPNGKYILAATLDNTLKLWDSK 226
++ V FSP+G+Y +A+ D ++KLWD +
Sbjct: 395 QLINLVSFSPDGRYFASASFDKSIKLWDGQ 424
Score = 215 (80.7 bits), Expect = 7.8e-17, P = 7.8e-17
Identities = 56/177 (31%), Positives = 90/177 (50%)
Query: 55 GAYD--GKFEKTIS-GHKLGI---SDV-AWSSDSRLLVSGSDDKTLKIWELSSGKC-LKT 106
G+YD GK T+ ++ + +DV A S +L+SGSDD T+ +W S K +
Sbjct: 330 GSYDHTGKEYDTLEEAQRVALERYNDVKAKSKGMEILISGSDDFTVIMWNPSVTKTSISR 389
Query: 107 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGS 166
L GH + +F+P S SFD+S+++WD ++GK L H V V ++ D
Sbjct: 390 LTGHQQLINLVSFSPDGRYFASASFDKSIKLWDGQSGKFLGNFRGHVGAVYQVCWSSDSR 449
Query: 167 LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 223
+VS S D +IWD + + K L + V V +SP+G + + + D L++W
Sbjct: 450 YLVSGSKDSTLKIWDIKTKKMEKELPGHADE-VYTVDWSPDGDRVASGSKDRLLRIW 505
Score = 210 (79.0 bits), Expect = 2.7e-16, P = 2.7e-16
Identities = 57/206 (27%), Positives = 109/206 (52%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
+L+GHT +V+ +K+ G + S S D+ ++++ DG+ + + GH ++ +A ++D
Sbjct: 267 SLSGHTMSVTCLKWGGEG-LIYSGSQDRTVRVFNTTDGRLVRVLDGHAHWVNTLALNTDY 325
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
+L +GS D T K ++ L+ + N V + + +++SGS D +V +W+
Sbjct: 326 -VLRTGSYDHTGKEYDTLEEAQRVALERY-NDVKAKSKGME--ILISGSDDFTVIMWNPS 381
Query: 142 TGKC-LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 200
K + L H ++ V F+ DG S+S+D ++WD SG+ L V
Sbjct: 382 VTKTSISRLTGHQQLINLVSFSPDGRYFASASFDKSIKLWDGQSGKFLGNFRGHVGA-VY 440
Query: 201 FVKFSPNGKYILAATLDNTLKLWDSK 226
V +S + +Y+++ + D+TLK+WD K
Sbjct: 441 QVCWSSDSRYLVSGSKDSTLKIWDIK 466
Score = 163 (62.4 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 44/174 (25%), Positives = 85/174 (48%)
Query: 58 DGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCC 117
D + + H G+SD ++ L + ++ ++ +C ++ GH+ V C
Sbjct: 94 DQEITNNLKNHLEGLSD-----ETTLSIYYQPQAVFRVRPVT--RCASSMSGHTEAVLNC 146
Query: 118 NFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 177
F+P VS D +VRIWD+ T TL H++ V V ++ D I ++ +G
Sbjct: 147 AFSPDGKGFVSVGGDTTVRIWDIYTSTPTHTLKGHTNWVLQVAWSPDSKKIATAGMEGDI 206
Query: 178 RIWDTASGQCLKTLIDDDNPPVSFVKFSP---NGKYI-LAATL-DNTLKLWDSK 226
RIW +G+ L + + ++ + + P N K + LA++ D+T+++WD++
Sbjct: 207 RIWCPQTGKQLGSTLKGHTKFITGLSWEPFHLNPKCVRLASSSKDSTIRIWDTE 260
>UNIPROTKB|Q2KID6 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9913 "Bos
taurus" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0071013 EMBL:BC112677
IPI:IPI00704198 RefSeq:NP_001039827.1 UniGene:Bt.74313
ProteinModelPortal:Q2KID6 STRING:Q2KID6 PRIDE:Q2KID6
Ensembl:ENSBTAT00000029844 GeneID:533951 KEGG:bta:533951 CTD:5356
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595
HOVERGEN:HBG053621 InParanoid:Q2KID6 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB NextBio:20876207 Uniprot:Q2KID6
Length = 513
Score = 283 (104.7 bits), Expect = 2.9e-24, P = 2.9e-24
Identities = 62/201 (30%), Positives = 102/201 (50%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
++GH V + P +W + SAD+ IKIW GK + +++GH + V S+ S
Sbjct: 199 ISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSP 258
Query: 83 LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 142
L S +DK +K W+L K ++ GH + V+ + +P +++V+ S D + RIWDVRT
Sbjct: 259 YLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRT 318
Query: 143 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 202
+ TL H++ V+ V I++ S+D R+WD +G+ TL + V V
Sbjct: 319 KASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKS-VRAV 377
Query: 203 KFSPNGKYILAATLDNTLKLW 223
P Y A+ + +K W
Sbjct: 378 VLHPR-HYTFASGSPDNIKQW 397
Score = 222 (83.2 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 60/207 (28%), Positives = 93/207 (44%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
LK +L GH V V S +L S DK +K W K + GH + +
Sbjct: 237 LKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLH 296
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
+LV+ S D T +IW++ + + TL GH+N V I++GS D ++R+W
Sbjct: 297 PTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLW 356
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 198
D+ GK TL H V AV + S S D + + W G ++ L N
Sbjct: 357 DLVAGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPDNI-KQWKFPDGSFIQNL-SGHNAI 414
Query: 199 VSFVKFSPNGKYILAATLDN-TLKLWD 224
++ + + +G +L + DN T+ LWD
Sbjct: 415 INTLTVNSDG--VLVSGADNGTMHLWD 439
Score = 202 (76.2 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 49/165 (29%), Positives = 82/165 (49%)
Query: 60 KFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNF 119
K + ISGH + +A ++ V+GS D+T+KIW+L+SGK +L GH + V
Sbjct: 194 KLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIV 253
Query: 120 NPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 179
+ +S + S D+ V+ WD+ K ++ H V + + ++V+ S D RI
Sbjct: 254 STRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARI 313
Query: 180 WDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
WD + + TL N V+ V+ I+ + D T++LWD
Sbjct: 314 WDVRTKASVHTLSGHTNA-VATVRCQAAEPQIITGSHDTTIRLWD 357
Score = 171 (65.3 bits), Expect = 9.4e-12, P = 9.4e-12
Identities = 44/174 (25%), Positives = 79/174 (45%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL+GHT AV++V+ + + S D I++W GK T++ HK + V
Sbjct: 324 TLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRH 383
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
SGS D +K W+ G ++ L GH+ + N ++VSG+ + ++ +WD R
Sbjct: 384 YTFASGSPDN-IKQWKFPDGSFIQNLSGHNAIINTLTVN-SDGVLVSGADNGTMHLWDWR 441
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD 195
TG + + A P S + + + + R+ + + +K +DD
Sbjct: 442 TGYNFQRVHAAVQPGS---LDSESGIFACAFDQSESRLLTAEADKTIKVYKEDD 492
>ZFIN|ZDB-GENE-040426-916 [details] [associations]
symbol:smu1 "smu-1 suppressor of mec-8 and unc-52
homolog (C. elegans)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
ZFIN:ZDB-GENE-040426-916 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668 CTD:55234
HOGENOM:HOG000264846 HOVERGEN:HBG079573 KO:K13111 OrthoDB:EOG49ZXP0
EMBL:BC045945 IPI:IPI00505889 RefSeq:NP_956493.1 UniGene:Dr.31728
ProteinModelPortal:Q7ZVA0 STRING:Q7ZVA0 PRIDE:Q7ZVA0 GeneID:393168
KEGG:dre:393168 InParanoid:Q7ZVA0 NextBio:20814238
ArrayExpress:Q7ZVA0 Uniprot:Q7ZVA0
Length = 513
Score = 283 (104.7 bits), Expect = 2.9e-24, P = 2.9e-24
Identities = 56/175 (32%), Positives = 98/175 (56%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS----GHKLGISD----VA 76
G V +FSP+G++L + S D I++W GK K + + + + D ++
Sbjct: 212 GQKSHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMS 271
Query: 77 WSSDSRLLVSGSDDKTLKIWELSSGKCLKTL-KGHSNYVFCCNFNPQSNLIVSGSFDESV 135
+S D+ +L +G+ D +K+W++ SG+CL+ + HS V C +F+ S I+S SFD+++
Sbjct: 272 FSRDTEMLATGAQDGKIKVWKIQSGQCLRRYERAHSKGVTCLSFSKDSTQILSASFDQTI 331
Query: 136 RIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 190
RI +++GKCLK HS V+ DG +S+S DG ++W+ + +C T
Sbjct: 332 RIHGLKSGKCLKEFRGHSSFVNEATLTPDGHHAISASSDGTVKVWNMKTTECTST 386
Score = 240 (89.5 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 51/169 (30%), Positives = 96/169 (56%)
Query: 67 GHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLK--GHSNY------VFCCN 118
G K + +S D + LV+GS D +++W ++GK K LK N+ V C +
Sbjct: 212 GQKSHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMS 271
Query: 119 FNPQSNLIVSGSFDESVRIWDVRTGKCLKTLP-AHSDPVSAVHFNRDGSLIVSSSYDGLC 177
F+ + ++ +G+ D +++W +++G+CL+ AHS V+ + F++D + I+S+S+D
Sbjct: 272 FSRDTEMLATGAQDGKIKVWKIQSGQCLRRYERAHSKGVTCLSFSKDSTQILSASFDQTI 331
Query: 178 RIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSK 226
RI SG+CLK + V+ +P+G + ++A+ D T+K+W+ K
Sbjct: 332 RIHGLKSGKCLKEFRGHSSF-VNEATLTPDGHHAISASSDGTVKVWNMK 379
Score = 145 (56.1 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 53/211 (25%), Positives = 94/211 (44%)
Query: 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV 85
H+K V+ + FS + + S+S D+ I+I G GK K GH +++ + D +
Sbjct: 306 HSKGVTCLSFSKDSTQILSASFDQTIRIHGLKSGKCLKEFRGHSSFVNEATLTPDGHHAI 365
Query: 86 SGSDDKTLKIWELSSGKCLKTLK--GHS-------NYVFCCNFNPQSNLIVSGSFDESVR 136
S S D T+K+W + + +C T K G S N V NP+ ++ + S +V
Sbjct: 366 SASSDGTVKVWNMKTTECTSTFKSLGTSAGTDITVNNVILLPKNPEHFVVCNRS--NTVV 423
Query: 137 IWDVRTGKCLKTLPAHS----DPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLI 192
I +++ G+ +++ + D V R G I D + + T +G+ +TL
Sbjct: 424 IMNMQ-GQIVRSFSSGKREGGDFVCCTLSPR-GEWIYCVGEDYVLYCFSTVTGKLERTLT 481
Query: 193 DDDNPPVSFVKFSPNGKYILAATLDNTLKLW 223
+ + + P+ I + D LKLW
Sbjct: 482 VHEKDVIG-IAHHPHQNLIGTYSEDGLLKLW 511
>UNIPROTKB|O43660 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9606 "Homo
sapiens" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0004871 "signal transducer activity" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0003714 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871
EMBL:CH471056 GO:GO:0000398 GO:GO:0071013 CTD:5356
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF044333 EMBL:AK002108 EMBL:BC020786 EMBL:BC106004
IPI:IPI00002624 IPI:IPI00382756 RefSeq:NP_001188493.1
RefSeq:NP_002660.1 UniGene:Hs.249996 ProteinModelPortal:O43660
SMR:O43660 IntAct:O43660 MINT:MINT-2999551 STRING:O43660
PhosphoSite:O43660 PaxDb:O43660 PRIDE:O43660
Ensembl:ENST00000302078 Ensembl:ENST00000499023 GeneID:5356
KEGG:hsa:5356 UCSC:uc003iny.3 UCSC:uc003inz.3 GeneCards:GC04M155457
HGNC:HGNC:9089 HPA:HPA035932 MIM:605961 neXtProt:NX_O43660
PharmGKB:PA33416 PhylomeDB:O43660 GenomeRNAi:5356 NextBio:20762
ArrayExpress:O43660 Bgee:O43660 CleanEx:HS_PLRG1
Genevestigator:O43660 GermOnline:ENSG00000171566 Uniprot:O43660
Length = 514
Score = 283 (104.7 bits), Expect = 3.0e-24, P = 3.0e-24
Identities = 62/201 (30%), Positives = 102/201 (50%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
++GH V + P +W + SAD+ IKIW GK + +++GH + V S+ S
Sbjct: 200 ISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSP 259
Query: 83 LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 142
L S +DK +K W+L K ++ GH + V+ + +P +++V+ S D + RIWDVRT
Sbjct: 260 YLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRT 319
Query: 143 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 202
+ TL H++ V+ V I++ S+D R+WD +G+ TL + V V
Sbjct: 320 KASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKS-VRAV 378
Query: 203 KFSPNGKYILAATLDNTLKLW 223
P Y A+ + +K W
Sbjct: 379 VLHPR-HYTFASGSPDNIKQW 398
Score = 222 (83.2 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 60/207 (28%), Positives = 93/207 (44%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
LK +L GH V V S +L S DK +K W K + GH + +
Sbjct: 238 LKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLH 297
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
+LV+ S D T +IW++ + + TL GH+N V I++GS D ++R+W
Sbjct: 298 PTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLW 357
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 198
D+ GK TL H V AV + S S D + + W G ++ L N
Sbjct: 358 DLVAGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPDNI-KQWKFPDGSFIQNL-SGHNAI 415
Query: 199 VSFVKFSPNGKYILAATLDN-TLKLWD 224
++ + + +G +L + DN T+ LWD
Sbjct: 416 INTLTVNSDG--VLVSGADNGTMHLWD 440
Score = 202 (76.2 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 49/165 (29%), Positives = 82/165 (49%)
Query: 60 KFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNF 119
K + ISGH + +A ++ V+GS D+T+KIW+L+SGK +L GH + V
Sbjct: 195 KLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIV 254
Query: 120 NPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 179
+ +S + S D+ V+ WD+ K ++ H V + + ++V+ S D RI
Sbjct: 255 STRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARI 314
Query: 180 WDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
WD + + TL N V+ V+ I+ + D T++LWD
Sbjct: 315 WDVRTKASVHTLSGHTNA-VATVRCQAAEPQIITGSHDTTIRLWD 358
Score = 171 (65.3 bits), Expect = 9.5e-12, P = 9.5e-12
Identities = 44/174 (25%), Positives = 79/174 (45%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL+GHT AV++V+ + + S D I++W GK T++ HK + V
Sbjct: 325 TLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRH 384
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
SGS D +K W+ G ++ L GH+ + N ++VSG+ + ++ +WD R
Sbjct: 385 YTFASGSPDN-IKQWKFPDGSFIQNLSGHNAIINTLTVN-SDGVLVSGADNGTMHLWDWR 442
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD 195
TG + + A P S + + + + R+ + + +K +DD
Sbjct: 443 TGYNFQRVHAAVQPGS---LDSESGIFACAFDQSESRLLTAEADKTIKVYREDD 493
>MGI|MGI:2429770 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:2429770 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
EMBL:AL603745 GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855
OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154 CTD:54475
HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS EMBL:BC018399 IPI:IPI00124677
RefSeq:NP_663406.2 UniGene:Mm.29176 ProteinModelPortal:Q8VEJ4
SMR:Q8VEJ4 STRING:Q8VEJ4 PhosphoSite:Q8VEJ4 PaxDb:Q8VEJ4
PRIDE:Q8VEJ4 Ensembl:ENSMUST00000103213 GeneID:217011
KEGG:mmu:217011 InParanoid:B1ARD5 NextBio:375506 Bgee:Q8VEJ4
CleanEx:MM_NLE1 Genevestigator:Q8VEJ4 GermOnline:ENSMUSG00000020692
Uniprot:Q8VEJ4
Length = 485
Score = 282 (104.3 bits), Expect = 3.0e-24, P = 3.0e-24
Identities = 59/176 (33%), Positives = 96/176 (54%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
+L GH++AV SV FSP G++LAS S D ++ W T GH+ + ++WS D
Sbjct: 109 SLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDG 168
Query: 82 RLLVSGSDDKTLKIWELSSGKCL-KTLKGHSNYVFCCNF-----NPQSNLIVSGSFDESV 135
+ L SG + + +W+ S+G + +TL GHS ++ ++ NP+ + S S D SV
Sbjct: 169 KKLASGCKNGQVLLWDPSTGLQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSV 228
Query: 136 RIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 191
R+WD G+C + L H+ V+ + + DG L+ S+S D ++W G +TL
Sbjct: 229 RVWDTTAGRCERILTGHTQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRTL 283
Score = 266 (98.7 bits), Expect = 1.8e-22, P = 1.8e-22
Identities = 47/116 (40%), Positives = 73/116 (62%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
+ GH ++ V FSP+ +AS+S DK IK+W GK+ ++ GH + +AWS+DSR
Sbjct: 368 MTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSR 427
Query: 83 LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
LLVSGS D TLK+W++ + K L GH++ V+ +++P + SG D+ +RIW
Sbjct: 428 LLVSGSSDSTLKVWDVKAQKLATDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 257 (95.5 bits), Expect = 1.8e-21, P = 1.8e-21
Identities = 55/142 (38%), Positives = 84/142 (59%)
Query: 40 EWLASSSADKLIKIWG-AYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWEL 98
E L S S D + +W A D K ++GH+ I+ V +S DSR++ S S DK++K+W+
Sbjct: 342 ERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDG 401
Query: 99 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSA 158
+GK L +L+GH V+ ++ S L+VSGS D ++++WDV+ K LP H+D V A
Sbjct: 402 RTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLATDLPGHADEVYA 461
Query: 159 VHFNRDGSLIVSSSYDGLCRIW 180
V ++ DG + S D RIW
Sbjct: 462 VDWSPDGQRVASGGKDKCLRIW 483
Score = 230 (86.0 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 51/141 (36%), Positives = 78/141 (55%)
Query: 84 LVSGSDDKTLKIWELSSGKC-LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 142
LVSGSDD TL +W + K L + GH + F+P S ++ S SFD+S+++WD RT
Sbjct: 344 LVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRT 403
Query: 143 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 202
GK L +L H V + ++ D L+VS S D ++WD + Q L T + V V
Sbjct: 404 GKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKA-QKLATDLPGHADEVYAV 462
Query: 203 KFSPNGKYILAATLDNTLKLW 223
+SP+G+ + + D L++W
Sbjct: 463 DWSPDGQRVASGGKDKCLRIW 483
Score = 226 (84.6 bits), Expect = 4.4e-18, P = 4.4e-18
Identities = 61/209 (29%), Positives = 110/209 (52%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
L GHT++V+ +++ +G L S+S D+ IK+W A+DG +T+ GH ++ +A S+D
Sbjct: 242 LTGHTQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYA 300
Query: 83 LLVSGSD--DKTLKIWELSSGKCLKTLK--GHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
L + + T+ +L LK LK S Y P+ +VSGS D ++ +W
Sbjct: 301 LRTGAFEPAEATVNAQDLQGS--LKELKERASSRYNLVRGQGPER--LVSGSDDFTLFLW 356
Query: 139 D-VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 197
K L + H ++ V F+ D ++ S+S+D ++WD +G+ L +L
Sbjct: 357 SPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASL-RGHVA 415
Query: 198 PVSFVKFSPNGKYILAATLDNTLKLWDSK 226
V + +S + + +++ + D+TLK+WD K
Sbjct: 416 AVYQIAWSADSRLLVSGSSDSTLKVWDVK 444
Score = 204 (76.9 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 43/153 (28%), Positives = 81/153 (52%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG-KFEKTISGHKLGISDVAW-- 77
FT GH V S+ +SP+G+ LAS + + +W G + +T++GH I+ ++W
Sbjct: 150 FTCKGHRHWVLSISWSPDGKKLASGCKNGQVLLWDPSTGLQVGRTLTGHSKWITGLSWEP 209
Query: 78 ---SSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 134
+ + R + S S D ++++W+ ++G+C + L GH+ V C + L+ S S D +
Sbjct: 210 LHMNPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDG-LLYSASQDRT 268
Query: 135 VRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSL 167
+++W G +TL H V+ + + D +L
Sbjct: 269 IKVWRAHDGVLCRTLQGHGHWVNTMALSTDYAL 301
Score = 159 (61.0 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 36/129 (27%), Positives = 67/129 (51%)
Query: 102 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHF 161
+C +L+GHS V F+P + SGS D +VR WD+ T T H V ++ +
Sbjct: 105 RCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISW 164
Query: 162 NRDGSLIVSSSYDGLCRIWDTASG-QCLKTLIDDDN--PPVSF--VKFSPNGKYILAATL 216
+ DG + S +G +WD ++G Q +TL +S+ + +P +Y+ +++
Sbjct: 165 SPDGKKLASGCKNGQVLLWDPSTGLQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSK 224
Query: 217 DNTLKLWDS 225
D ++++WD+
Sbjct: 225 DGSVRVWDT 233
Score = 131 (51.2 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 26/75 (34%), Positives = 38/75 (50%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
+L GH AV + +S + L S S+D +K+W K + GH + V WS D
Sbjct: 409 SLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLATDLPGHADEVYAVDWSPDG 468
Query: 82 RLLVSGSDDKTLKIW 96
+ + SG DK L+IW
Sbjct: 469 QRVASGGKDKCLRIW 483
>UNIPROTKB|E2QYT6 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GeneTree:ENSGT00700000104496 OMA:ITAEADK EMBL:AAEX03010065
Ensembl:ENSCAFT00000013353 Uniprot:E2QYT6
Length = 515
Score = 283 (104.7 bits), Expect = 3.0e-24, P = 3.0e-24
Identities = 62/201 (30%), Positives = 102/201 (50%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
++GH V + P +W + SAD+ IKIW GK + +++GH + V S+ S
Sbjct: 201 ISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSP 260
Query: 83 LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 142
L S +DK +K W+L K ++ GH + V+ + +P +++V+ S D + RIWDVRT
Sbjct: 261 YLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRT 320
Query: 143 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 202
+ TL H++ V+ V I++ S+D R+WD +G+ TL + V V
Sbjct: 321 KASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKS-VRAV 379
Query: 203 KFSPNGKYILAATLDNTLKLW 223
P Y A+ + +K W
Sbjct: 380 VLHPR-HYTFASGSPDNIKQW 399
Score = 222 (83.2 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 60/207 (28%), Positives = 93/207 (44%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
LK +L GH V V S +L S DK +K W K + GH + +
Sbjct: 239 LKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLH 298
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
+LV+ S D T +IW++ + + TL GH+N V I++GS D ++R+W
Sbjct: 299 PTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLW 358
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 198
D+ GK TL H V AV + S S D + + W G ++ L N
Sbjct: 359 DLVAGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPDNI-KQWKFPDGSFIQNL-SGHNAI 416
Query: 199 VSFVKFSPNGKYILAATLDN-TLKLWD 224
++ + + +G +L + DN T+ LWD
Sbjct: 417 INTLTVNSDG--VLVSGADNGTMHLWD 441
Score = 210 (79.0 bits), Expect = 2.8e-16, P = 2.8e-16
Identities = 57/201 (28%), Positives = 93/201 (46%)
Query: 24 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRL 83
AG T AV + N +A + W K + ISGH + +A ++
Sbjct: 161 AGMTSAVMEAGNAKNSALMAKKAPTMPKPQWHP-PWKLYRVISGHLGWVRCIAVEPGNQW 219
Query: 84 LVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 143
V+GS D+T+KIW+L+SGK +L GH + V + +S + S D+ V+ WD+
Sbjct: 220 FVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYN 279
Query: 144 KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK 203
K ++ H V + + ++V+ S D RIWD + + TL N V+ V+
Sbjct: 280 KVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNA-VATVR 338
Query: 204 FSPNGKYILAATLDNTLKLWD 224
I+ + D T++LWD
Sbjct: 339 CQAAEPQIITGSHDTTIRLWD 359
Score = 171 (65.3 bits), Expect = 9.5e-12, P = 9.5e-12
Identities = 44/174 (25%), Positives = 79/174 (45%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
TL+GHT AV++V+ + + S D I++W GK T++ HK + V
Sbjct: 326 TLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRH 385
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
SGS D +K W+ G ++ L GH+ + N ++VSG+ + ++ +WD R
Sbjct: 386 YTFASGSPDN-IKQWKFPDGSFIQNLSGHNAIINTLTVN-SDGVLVSGADNGTMHLWDWR 443
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD 195
TG + + A P S + + + + R+ + + +K +DD
Sbjct: 444 TGYNFQRVHAAVQPGS---LDSESGIFACAFDQSESRLLTAEADKTIKVYKEDD 494
WARNING: HSPs involving 1865 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.134 0.419 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 247 234 0.00087 113 3 11 22 0.42 33
32 0.43 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 2115
No. of states in DFA: 611 (65 KB)
Total size of DFA: 207 KB (2113 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 23.15u 0.08s 23.23t Elapsed: 00:00:05
Total cpu time: 23.33u 0.08s 23.41t Elapsed: 00:00:05
Start: Thu Aug 15 15:10:24 2013 End: Thu Aug 15 15:10:29 2013
WARNINGS ISSUED: 2