RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy4393
(247 letters)
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor
acetylhydrolase IB subunit alpha {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 317
Score = 139 bits (349), Expect = 3e-40
Identities = 79/274 (28%), Positives = 116/274 (42%), Gaps = 63/274 (22%)
Query: 15 PNYVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISD 74
P K+ L+GH V+ V F P + S+S D IK+W G FE+T+ GH + D
Sbjct: 5 PRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQD 64
Query: 75 V------------------------------------------AWSSDSRLLVSGSDDKT 92
+ + + +VS S DKT
Sbjct: 65 ISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKT 124
Query: 93 LKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAH 152
+K+WE+ +G C+KT GH +V N LI S S D++VR+W V T +C L H
Sbjct: 125 IKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREH 184
Query: 153 SDPVSAVHFN--------------------RDGSLIVSSSYDGLCRIWDTASGQCLKTLI 192
V + + + G ++S S D ++WD ++G CL TL+
Sbjct: 185 RHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLV 244
Query: 193 DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSK 226
DN V V F GK+IL+ D TL++WD K
Sbjct: 245 GHDN-WVRGVLFHSGGKFILSCADDKTLRVWDYK 277
Score = 138 bits (348), Expect = 3e-40
Identities = 63/210 (30%), Positives = 111/210 (52%), Gaps = 21/210 (10%)
Query: 35 FSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLK 94
PNG+ + S+S DK IK+W G KT +GH+ + V + D L+ S S+D+T++
Sbjct: 109 IMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVR 168
Query: 95 IWELSSGKCLKTLKGHSNYVFCCNFN--------------------PQSNLIVSGSFDES 134
+W +++ +C L+ H + V C ++ ++SGS D++
Sbjct: 169 VWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKT 228
Query: 135 VRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD 194
+++WDV TG CL TL H + V V F+ G I+S + D R+WD + +C+KTL
Sbjct: 229 IKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAH 288
Query: 195 DNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
++ V+ + F Y++ ++D T+K+W+
Sbjct: 289 EH-FVTSLDFHKTAPYVVTGSVDQTVKVWE 317
Score = 134 bits (337), Expect = 2e-38
Identities = 51/181 (28%), Positives = 94/181 (51%), Gaps = 20/181 (11%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW--- 77
T GH + V V+ + +G +AS S D+ +++W + + + H+ + ++W
Sbjct: 137 KTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPE 196
Query: 78 -----------------SSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFN 120
L+SGS DKT+K+W++S+G CL TL GH N+V F+
Sbjct: 197 SSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH 256
Query: 121 PQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 180
I+S + D+++R+WD + +C+KTL AH V+++ F++ +V+ S D ++W
Sbjct: 257 SGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 316
Query: 181 D 181
+
Sbjct: 317 E 317
Score = 81.3 bits (199), Expect = 1e-18
Identities = 23/79 (29%), Positives = 45/79 (56%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
TL GH V V F G+++ S + DK +++W + + KT++ H+ ++ + +
Sbjct: 239 CLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFH 298
Query: 79 SDSRLLVSGSDDKTLKIWE 97
+ +V+GS D+T+K+WE
Sbjct: 299 KTAPYVVTGSVDQTVKVWE 317
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G
protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Length = 340
Score = 127 bits (319), Expect = 9e-36
Identities = 58/262 (22%), Positives = 101/262 (38%), Gaps = 46/262 (17%)
Query: 11 SNPKPNYVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKL 70
+ + TL GH + ++ + + L S+S D + IW +Y I
Sbjct: 39 PVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSS 98
Query: 71 GISDVAWSSDSRLLVSGSD----------------------------------------- 89
+ A++ + G
Sbjct: 99 WVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIV 158
Query: 90 ----DKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 145
D T +W++ +G+ T GH+ V + P + L VSG+ D S ++WDVR G C
Sbjct: 159 TSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMC 218
Query: 146 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP-PVSFVKF 204
+T H ++A+ F +G+ + S D CR++D + Q L T D+ ++ V F
Sbjct: 219 RQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSF 278
Query: 205 SPNGKYILAATLDNTLKLWDSK 226
S +G+ +LA D +WD+
Sbjct: 279 SKSGRLLLAGYDDFNCNVWDAL 300
Score = 126 bits (315), Expect = 5e-35
Identities = 38/158 (24%), Positives = 74/158 (46%), Gaps = 2/158 (1%)
Query: 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV 85
HT V S+ +P+ S + D K+W +G +T +GH+ I+ + + +
Sbjct: 183 HTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFA 242
Query: 86 SGSDDKTLKIWELSSGKCLKTLKGHSNY--VFCCNFNPQSNLIVSGSFDESVRIWDVRTG 143
+GSDD T ++++L + + L T + + +F+ L+++G D + +WD
Sbjct: 243 TGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKA 302
Query: 144 KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181
L H + VS + DG + + S+D +IW+
Sbjct: 303 DRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 121 bits (304), Expect = 2e-33
Identities = 45/179 (25%), Positives = 82/179 (45%), Gaps = 3/179 (1%)
Query: 48 DKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTL 107
D +W G+ T +GH + ++ + D+RL VSG+ D + K+W++ G C +T
Sbjct: 163 DTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTF 222
Query: 108 KGHSNYVFCCNFNPQSNLIVSGSFDESVRI--WDVRTGKCLKTLPAHSDPVSAVHFNRDG 165
GH + + F P N +GS D + R+ + +++V F++ G
Sbjct: 223 TGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSG 282
Query: 166 SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
L+++ D C +WD L DN VS + + +G + + D+ LK+W+
Sbjct: 283 RLLLAGYDDFNCNVWDALKADRAGVLAGHDN-RVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 119 bits (297), Expect = 2e-32
Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 2/123 (1%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKL--GISDVA 76
+ T GH ++++ F PNG A+ S D +++ + T S + GI+ V+
Sbjct: 218 CRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVS 277
Query: 77 WSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 136
+S RLL++G DD +W+ L GH N V C + +GS+D ++
Sbjct: 278 FSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLK 337
Query: 137 IWD 139
IW+
Sbjct: 338 IWN 340
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 388
Score = 115 bits (287), Expect = 1e-30
Identities = 43/172 (25%), Positives = 77/172 (44%), Gaps = 25/172 (14%)
Query: 35 FSPNGEWLASSSADKLIKIWGAYDGKFEKTI-------SGHKLGISDVAWSSDSRLLVSG 87
+G+++A+ S D+ +++W + G + + +GHK + V ++ D + +VSG
Sbjct: 213 SPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSG 272
Query: 88 SDDKTLKIWELSSGK------------CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 135
S D+++K+W L + C T GH ++V I+SGS D V
Sbjct: 273 SLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGV 332
Query: 136 RIWDVRTGKCLKTLPAHSDPVSAVH------FNRDGSLIVSSSYDGLCRIWD 181
WD ++G L L H + V +V + ++ + S D RIW
Sbjct: 333 LFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWK 384
Score = 106 bits (264), Expect = 2e-27
Identities = 59/284 (20%), Positives = 102/284 (35%), Gaps = 66/284 (23%)
Query: 9 SSSNPKPNYVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKL------------------ 50
S++N P + + + SV FSP+G++LA+ + D+L
Sbjct: 103 SAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGH 162
Query: 51 ------------------------IKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVS 86
++IW G+ T+S + D + + +
Sbjct: 163 EQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAA 222
Query: 87 GSDDKTLKIWELSSGKCLKTLK-------GHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
GS D+ +++W+ +G ++ L GH + V+ F +VSGS D SV++W+
Sbjct: 223 GSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWN 282
Query: 140 VRTGK------------CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC 187
++ C T H D V +V ++ I+S S D WD SG
Sbjct: 283 LQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNP 342
Query: 188 LKTLIDDDNPPVS-----FVKFSPNGKYILAATLDNTLKLWDSK 226
L L N +S P + D ++W K
Sbjct: 343 LLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYK 386
Score = 96.0 bits (237), Expect = 1e-23
Identities = 70/253 (27%), Positives = 121/253 (47%), Gaps = 28/253 (11%)
Query: 12 NPKPNYVLKFTLA---GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG- 67
NP + L HT V VKFS +GE+LA+ +K +++ DG +S
Sbjct: 44 NPALPREIDVELHKSLDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDD 102
Query: 68 -----------------HKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGH 110
L I V +S D + L +G++D+ ++IW++ + K + L+GH
Sbjct: 103 SAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGH 162
Query: 111 SNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVS 170
++ ++ P + +VSGS D +VRIWD+RTG+C TL + DG I +
Sbjct: 163 EQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAA 222
Query: 171 SSYDGLCRIWDTASGQCLKTLIDDDNP------PVSFVKFSPNGKYILAATLDNTLKLWD 224
S D R+WD+ +G ++ L ++ V V F+ +G+ +++ +LD ++KLW+
Sbjct: 223 GSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWN 282
Query: 225 SKVVTPAIICSTP 237
+ TP
Sbjct: 283 LQNANNKSDSKTP 295
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein
7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Length = 342
Score = 103 bits (256), Expect = 1e-26
Identities = 66/241 (27%), Positives = 104/241 (43%), Gaps = 46/241 (19%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD- 80
L GH V + G + S S D +K+W A GK +T+ GH G+ +
Sbjct: 11 VLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNI 69
Query: 81 -------------------------------------SRLLVSGSDDKTLKIWELSSGKC 103
+ +VSGS D TL++W++ +G+C
Sbjct: 70 IISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQC 129
Query: 104 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNR 163
L L GH V C ++ +VSG++D V++WD T CL TL H++ V ++ F
Sbjct: 130 LHVLMGHVAAVRCVQYDG--RRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF-- 185
Query: 164 DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 223
DG +VS S D R+WD +G C+ TL + +++ D+T+K+W
Sbjct: 186 DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSG---MELKDNILVSGNADSTVKIW 242
Query: 224 D 224
D
Sbjct: 243 D 243
Score = 101 bits (250), Expect = 9e-26
Identities = 51/193 (26%), Positives = 98/193 (50%), Gaps = 13/193 (6%)
Query: 41 WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSS 100
+ S + D ++K+W T+ GH + D +VSGS D ++++W++ +
Sbjct: 149 RVVSGAYDFMVKVWDPETETCLHTLQGHT--NRVYSLQFDGIHVVSGSLDTSIRVWDVET 206
Query: 101 GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVH 160
G C+ TL GH + N++VSG+ D +V+IWD++TG+CL+TL + SAV
Sbjct: 207 GNCIHTLTGHQSLTSGMELKD--NILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVT 264
Query: 161 FNR-DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP----PVSFVKFSPNGKYILAAT 215
+ + + +++SS DG ++WD +G+ ++ L+ ++ V ++ S +
Sbjct: 265 CLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGS 324
Query: 216 LDNT----LKLWD 224
+ T L + D
Sbjct: 325 RNGTEETKLLVLD 337
Score = 93.0 bits (229), Expect = 8e-23
Identities = 44/176 (25%), Positives = 80/176 (45%), Gaps = 14/176 (7%)
Query: 16 NYVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV 75
TL GHT +G + S S D I++W G T++GH+ S +
Sbjct: 166 TETCLHTLQGHTN--RVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGM 223
Query: 76 AWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYV-FCCNFNPQSNLIVSGSFDES 134
+ +LVSG+ D T+KIW++ +G+CL+TL+G + + N +++ S D +
Sbjct: 224 ELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGT 281
Query: 135 VRIWDVRTGKCLKTLPA-----HSDPVSAVHFNRDGSLIVSSSYDGL----CRIWD 181
V++WD++TG+ ++ L V + + + S +G + D
Sbjct: 282 VKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLD 337
Score = 87.6 bits (215), Expect = 8e-21
Identities = 57/209 (27%), Positives = 88/209 (42%), Gaps = 44/209 (21%)
Query: 54 WGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNY 113
W + K K + GH + +VSGSDD TLK+W +GKCL+TL GH+
Sbjct: 1 WRRGELKSPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGG 59
Query: 114 VFCCNFNP--------------------------------------QSNLIVSGSFDESV 135
V+ +VSGS D ++
Sbjct: 60 VWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATL 119
Query: 136 RIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD 195
R+WD+ TG+CL L H V DG +VS +YD + ++WD + CL TL
Sbjct: 120 RVWDIETGQCLHVLMGHVAAV--RCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHT 177
Query: 196 NPPVSFVKFSPNGKYILAATLDNTLKLWD 224
N +G ++++ +LD ++++WD
Sbjct: 178 NR---VYSLQFDGIHVVSGSLDTSIRVWD 203
Score = 87.2 bits (214), Expect = 1e-20
Identities = 68/244 (27%), Positives = 107/244 (43%), Gaps = 44/244 (18%)
Query: 19 LKFTLAGHTKAVSSVKFSPN--------------------------------------GE 40
TL GHT V S + N +
Sbjct: 49 CLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEK 108
Query: 41 WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSS 100
+ S S D +++W G+ + GH + D R +VSG+ D +K+W+ +
Sbjct: 109 RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRC--VQYDGRRVVSGAYDFMVKVWDPET 166
Query: 101 GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVH 160
CL TL+GH+N V+ F+ +VSGS D S+R+WDV TG C+ TL H S +
Sbjct: 167 ETCLHTLQGHTNRVYSLQFDG--IHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGME 224
Query: 161 FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTL 220
+++VS + D +IWD +GQCL+TL + + N +++ ++ D T+
Sbjct: 225 L--KDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTV 282
Query: 221 KLWD 224
KLWD
Sbjct: 283 KLWD 286
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 360
Score = 92.2 bits (227), Expect = 2e-22
Identities = 20/189 (10%), Positives = 46/189 (24%), Gaps = 18/189 (9%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE-------KTISGHKLGISDVAW 77
+ F + + L S L F I +
Sbjct: 176 TENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKL 235
Query: 78 SSDSRLLVSGS-------DDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 130
S +G + + + + L+ +
Sbjct: 236 VPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAP 295
Query: 131 FDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 190
+ +DV+T K + + ++ + + D ++ DG + + +T
Sbjct: 296 EKGVLLKYDVKTRK----VTEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPEDERT 351
Query: 191 LIDDDNPPV 199
+ D P V
Sbjct: 352 VETDKRPLV 360
Score = 81.1 bits (198), Expect = 2e-18
Identities = 20/219 (9%), Positives = 57/219 (26%), Gaps = 20/219 (9%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
+ P + I ++ K + A+ +DS
Sbjct: 132 DFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKI-FAATTENSHDYAPAFDADS 190
Query: 82 RLLVSGSDDKTLKIWELSSGKC-------LKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 134
+ L S + + P+S +G +D +
Sbjct: 191 KNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLN 250
Query: 135 VRIW-------DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC 187
D + + L + S + + G+ +D + +
Sbjct: 251 DMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRK- 309
Query: 188 LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSK 226
+ + ++ ++ ++ S + K ++ D + + +
Sbjct: 310 VTEVKNN----LTDLRLSADRKTVMVRKDDGKIYTFPLE 344
Score = 75.7 bits (184), Expect = 1e-16
Identities = 12/143 (8%), Positives = 36/143 (25%), Gaps = 11/143 (7%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSA-------DKLIKIWGAYDGKFEKTISGHKLGIS 73
F + + + K P + D + + L S
Sbjct: 221 FVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYS 280
Query: 74 DVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 133
+ + L +++ + K + N + + ++ D
Sbjct: 281 VPVHGEFAAYYQGAPEKGVLLKYDVKTRK----VTEVKNNLTDLRLSADRKTVMVRKDDG 336
Query: 134 SVRIWDVRTGKCLKTLPAHSDPV 156
+ + + + +T+ P+
Sbjct: 337 KIYTFPLEKPEDERTVETDKRPL 359
Score = 69.1 bits (167), Expect = 3e-14
Identities = 12/95 (12%), Positives = 33/95 (34%), Gaps = 4/95 (4%)
Query: 13 PKPNYVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 72
+Y + L S + + ++ + K ++ K +
Sbjct: 262 DPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRK----VTEVKNNL 317
Query: 73 SDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTL 107
+D+ S+D + ++ DD + + L + +T+
Sbjct: 318 TDLRLSADRKTVMVRKDDGKIYTFPLEKPEDERTV 352
Score = 56.4 bits (134), Expect = 6e-10
Identities = 25/213 (11%), Positives = 55/213 (25%), Gaps = 20/213 (9%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSAD--KLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 82
+ V+ + + + I+ + + + + + +
Sbjct: 40 PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDY-RTGKAEKFEENLGNVFAMGVDRNGK 98
Query: 83 LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYV----------FCCNFNPQSNLIVSGSFD 132
V +D + +L +GK + + F P + G
Sbjct: 99 FAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVM 158
Query: 133 ESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT-- 190
+++ ++D+ K +S A F+ D + SY L D
Sbjct: 159 QAIHVYDMEGRKIFAATTENSH-DYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVV 217
Query: 191 ----LIDDDNPPVSFVKFSPNGKYILAATLDNT 219
+I + K P A D
Sbjct: 218 SKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLN 250
Score = 42.9 bits (99), Expect = 2e-05
Identities = 23/133 (17%), Positives = 43/133 (32%), Gaps = 7/133 (5%)
Query: 75 VAWS-SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 133
+S D L+ S + I ++S LK + + + E
Sbjct: 8 EDFSPLDGDLIAFVSRGQ-AFIQDVSGTYVLKV--PEPLRIRYVRRGGDTKVAFIHGTRE 64
Query: 134 --SVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 191
+ I+D RTGK + + V A+ +R+G V ++ D +G+
Sbjct: 65 GDFLGIYDYRTGK-AEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIE 123
Query: 192 IDDDNPPVSFVKF 204
+ F
Sbjct: 124 RSREAMITDFTIS 136
Score = 40.2 bits (92), Expect = 1e-04
Identities = 13/65 (20%), Positives = 23/65 (35%), Gaps = 6/65 (9%)
Query: 164 DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD--NTLK 221
DG LI S I D + LK + + +V+ + K + L
Sbjct: 14 DGDLIAFVSRGQA-FIQDVSGTYVLKVP---EPLRIRYVRRGGDTKVAFIHGTREGDFLG 69
Query: 222 LWDSK 226
++D +
Sbjct: 70 IYDYR 74
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 293
Score = 90.7 bits (223), Expect = 3e-22
Identities = 53/154 (34%), Positives = 83/154 (53%), Gaps = 15/154 (9%)
Query: 37 PNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIW 96
+ +++ S+S D+ IK+W +F +T++GHK GI+ RL+VSGS D T+++W
Sbjct: 146 FDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIAC--LQYRDRLVVSGSSDNTIRLW 203
Query: 97 ELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG---------KCLK 147
++ G CL+ L+GH + IVSG++D +++WD+ CL+
Sbjct: 204 DIECGACLRVLEGH--EELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLR 261
Query: 148 TLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181
TL HS V + F D IVSSS+D IWD
Sbjct: 262 TLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWD 293
Score = 83.7 bits (205), Expect = 1e-19
Identities = 47/157 (29%), Positives = 80/157 (50%), Gaps = 16/157 (10%)
Query: 77 WSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 136
D + +VS S D+T+K+W S+ + ++TL GH + C + L+VSGS D ++R
Sbjct: 144 VDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIR 201
Query: 137 IWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG---------QC 187
+WD+ G CL+ L H + V D IVS +YDG ++WD + C
Sbjct: 202 LWDIECGACLRVLEGHEELV--RCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLC 259
Query: 188 LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
L+TL++ + I++++ D+T+ +WD
Sbjct: 260 LRTLVEHSGRVFRL---QFDEFQIVSSSHDDTILIWD 293
Score = 79.5 bits (194), Expect = 4e-18
Identities = 46/244 (18%), Positives = 93/244 (38%), Gaps = 50/244 (20%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
+ +K V + + + S D IKIW + ++ ++GH + + +
Sbjct: 10 CRSETSKGVYC--LQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERV 67
Query: 82 RLLVSGS--------------------------------------DDKTLKIWELSSGKC 103
+ S D+++ +W+++S
Sbjct: 68 IITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTD 127
Query: 104 L---KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVH 160
+ + L GH V +F+ + IVS S D ++++W+ T + ++TL H ++ +
Sbjct: 128 ITLRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQ 185
Query: 161 FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTL 220
+ L+VS S D R+WD G CL+ + + K I++ D +
Sbjct: 186 Y--RDRLVVSGSSDNTIRLWDIECGACLRV---LEGHEELVRCIRFDNKRIVSGAYDGKI 240
Query: 221 KLWD 224
K+WD
Sbjct: 241 KVWD 244
Score = 79.5 bits (194), Expect = 4e-18
Identities = 43/222 (19%), Positives = 86/222 (38%), Gaps = 48/222 (21%)
Query: 66 SGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNL 125
S G+ + + D + +VSG D T+KIW+ ++ +C + L GH+ V C ++ + +
Sbjct: 12 SETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVII 69
Query: 126 IVSGSFDE--------------------------------------SVRIWDVRTGKCL- 146
S S+ +WD+ + +
Sbjct: 70 TGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDIT 129
Query: 147 --KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKF 204
+ L H V+ V F+ IVS+S D ++W+T++ + ++TL +
Sbjct: 130 LRRVLVGHRAAVNVVDFDDKY--IVSASGDRTIKVWNTSTCEFVRTL---NGHKRGIACL 184
Query: 205 SPNGKYILAATLDNTLKLWDSKVVTPAIICSTPLNLNYFYRN 246
+ +++ + DNT++LWD + + L R
Sbjct: 185 QYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF 226
Score = 38.7 bits (88), Expect = 4e-04
Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 54
TL H+ V ++F + SSS D I IW
Sbjct: 262 TLVEHSGRVFRLQFDEF--QIVSSSHDDTILIW 292
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos
taurus) [TaxId: 9913]}
Length = 371
Score = 86.5 bits (212), Expect = 2e-20
Identities = 27/170 (15%), Positives = 59/170 (34%), Gaps = 8/170 (4%)
Query: 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK--TISGHKLGISDVAWSSDSRL 83
+ +S ++ + +A + + I+ K+ + + H ++ V W+ DS
Sbjct: 6 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNR 65
Query: 84 LVSGSDDKTLKIWELSSG--KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
+V+ D+ +W L K + + C + P GS + I
Sbjct: 66 IVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFE 125
Query: 142 TGK----CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC 187
C V ++ ++ + L+ + S D CRI+ +
Sbjct: 126 QENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEV 175
Score = 81.4 bits (199), Expect = 2e-18
Identities = 30/163 (18%), Positives = 60/163 (36%), Gaps = 7/163 (4%)
Query: 72 ISDVAWSSDSRLLVSGSDDKTLKIWELSSGK--CLKTLKGHSNYVFCCNFNPQSNLIVSG 129
IS AW+ D + ++ + I+E S K + LK H+ V ++ P SN IV+
Sbjct: 10 ISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTC 69
Query: 130 SFDESVRIWDVRTG--KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ- 186
D + +W ++ K + + V + + S + I
Sbjct: 70 GTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQEND 129
Query: 187 --CLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKV 227
K + V + + PN + A + D +++ + +
Sbjct: 130 WWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYI 172
Score = 71.8 bits (174), Expect = 4e-15
Identities = 35/184 (19%), Positives = 62/184 (33%), Gaps = 6/184 (3%)
Query: 7 PSSSSNPKPNYVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS 66
P+ + P L F + V V FS NG +A S D + + A T++
Sbjct: 181 PTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLA 240
Query: 67 GHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLI 126
L + V + ++S L+ +G D ++ S + G + + +
Sbjct: 241 SETLPLLAVTFITESSLVAAGHDCFP-VLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARE 299
Query: 127 VSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDG----SLIVSSSYDGLCRIWDT 182
+ D+ H + VS + G S ++ DG IWD
Sbjct: 300 RFQNLDKKASSEG-SAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDV 358
Query: 183 ASGQ 186
S +
Sbjct: 359 RSLE 362
Score = 66.0 bits (159), Expect = 3e-13
Identities = 44/248 (17%), Positives = 80/248 (32%), Gaps = 26/248 (10%)
Query: 16 NYVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW--GAYDGKFEKTISGHKLGIS 73
+V L H V+ V ++P+ + + D+ +W K I
Sbjct: 40 KWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAAR 99
Query: 74 DVAWSSDSRLLVSGSDDKTLKIWELSSGK----CLKTLKGHSNYVFCCNFNPQSNLIVSG 129
V W+ + + GS + + I C K + V +++P S L+ +G
Sbjct: 100 CVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAG 159
Query: 130 SFDESVRIWDVRTGK------------------CLKTLPAHSDPVSAVHFNRDGSLIVSS 171
S D RI+ + + + V V F+ +GS +
Sbjct: 160 SCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWV 219
Query: 172 SYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPA 231
S+D + D + TL + P V F ++AA D L+
Sbjct: 220 SHDSTVCLADADKKMAVATLASETLPL-LAVTFITESS-LVAAGHDCFPVLFTYDSAAGK 277
Query: 232 IICSTPLN 239
+ L+
Sbjct: 278 LSFGGRLD 285
Score = 64.5 bits (155), Expect = 1e-12
Identities = 13/74 (17%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Query: 152 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC-LKTLIDDDNPPVSFVKFSPNGKY 210
+P+S +N+D + I + I++ + + + + N V+ V ++P+
Sbjct: 6 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNR 65
Query: 211 ILAATLDNTLKLWD 224
I+ D +W
Sbjct: 66 IVTCGTDRNAYVWT 79
Score = 62.6 bits (150), Expect = 5e-12
Identities = 24/175 (13%), Positives = 54/175 (30%), Gaps = 7/175 (4%)
Query: 54 WGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNY 113
G+ S + V +S++ + S D T+ + + + TL +
Sbjct: 186 SKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLP 245
Query: 114 VFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY 173
+ F +S+L+ +G D ++ + + D + +
Sbjct: 246 LLAVTFITESSLVAAGH-DCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNL 304
Query: 174 DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKY----ILAATLDNTLKLWD 224
D +A+ + + VS + GK +D + +WD
Sbjct: 305 DKKASSEGSAAAGAGLDSLHKN--SVSQISVLSGGKAKCSQFCTTGMDGGMSIWD 357
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 355
Score = 86.1 bits (211), Expect = 3e-20
Identities = 27/178 (15%), Positives = 60/178 (33%), Gaps = 2/178 (1%)
Query: 20 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 79
+ TL GH +V + ++ + + DK+I+++ + + KF +SGH G+ + ++
Sbjct: 5 RTTLRGHMTSVITC-LQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAH 63
Query: 80 DSRLLVSGSDDKTLKIWELS-SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
L+ +D + + IV+GS D ++ +W
Sbjct: 64 GGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVW 123
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 196
+ + D H + V + + + + DN
Sbjct: 124 KLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDN 181
Score = 84.9 bits (208), Expect = 9e-20
Identities = 29/119 (24%), Positives = 49/119 (41%), Gaps = 1/119 (0%)
Query: 106 TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDG 165
TL+GH V C + N +++G+ D+ +R++D K L L H V A+ + G
Sbjct: 7 TLRGHMTSVITC-LQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG 65
Query: 166 SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
L+ S+ + + + N KYI+ + DNTL +W
Sbjct: 66 ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWK 124
Score = 77.6 bits (189), Expect = 3e-17
Identities = 30/150 (20%), Positives = 65/150 (43%), Gaps = 4/150 (2%)
Query: 64 TISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQS 123
T+ GH + + +++G+DDK +++++ + K L L GH V+ +
Sbjct: 7 TLRGHMTSVIT-CLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAH-G 64
Query: 124 NLIVSGSFDESVRIWDVRT--GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181
++VSGS D +VR+WD++ + + + ++ IV+ S D +W
Sbjct: 65 GILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWK 124
Query: 182 TASGQCLKTLIDDDNPPVSFVKFSPNGKYI 211
+ ++ + P+ F N ++
Sbjct: 125 LPKESSVPDHGEEHDYPLVFHTPEENPYFV 154
Score = 64.1 bits (154), Expect = 1e-12
Identities = 39/187 (20%), Positives = 72/187 (38%), Gaps = 5/187 (2%)
Query: 38 NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWE 97
+G + S S D + +W K +SGH I + + + +S S D T++IW+
Sbjct: 170 HGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWD 229
Query: 98 LSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVS 157
L +G+ + TL+GH+ V + + + + + + K H +S
Sbjct: 230 LENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKF----SYHHTNLS 285
Query: 158 AVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD 217
A+ I+ S + I++ SG+ + I D + V F + A D
Sbjct: 286 AITTFYVSDNILVSGSENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKT-LVAAVEKD 344
Query: 218 NTLKLWD 224
L
Sbjct: 345 GQSFLEI 351
Score = 51.4 bits (121), Expect = 2e-08
Identities = 12/75 (16%), Positives = 24/75 (32%), Gaps = 2/75 (2%)
Query: 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK-TISGHKLGISDVAWSSDSRLL 84
H +S++ + + S ++ I+ GK I I V + L+
Sbjct: 280 HHTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHANILKDADQIWSVNFKGK-TLV 338
Query: 85 VSGSDDKTLKIWELS 99
+ D + L
Sbjct: 339 AAVEKDGQSFLEILD 353
Score = 48.4 bits (113), Expect = 2e-07
Identities = 46/265 (17%), Positives = 90/265 (33%), Gaps = 59/265 (22%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGA-YDGKFEKTISGHKLGISDVAW 77
L+GH V ++K++ G ++ S+ + + D+
Sbjct: 45 FLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVE 104
Query: 78 SSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVF---------------------C 116
+ + +V+GS D TL +W+L + +Y
Sbjct: 105 YKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASV 164
Query: 117 CNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGL 176
+ N++VSGS+D ++ +WDV KCL L H+D + + ++ + +S+S D
Sbjct: 165 RTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTT 224
Query: 177 CRIWDTASGQCLKTLIDDDNP-------------------------------------PV 199
RIWD +G+ + TL +
Sbjct: 225 IRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNL 284
Query: 200 SFVKFSPNGKYILAATLDNTLKLWD 224
S + IL + +N +++
Sbjct: 285 SAITTFYVSDNILVSGSENQFNIYN 309
Score = 34.9 bits (78), Expect = 0.007
Identities = 5/37 (13%), Positives = 12/37 (32%), Gaps = 1/37 (2%)
Query: 18 VLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 54
++ + + SV F +A+ D +
Sbjct: 315 LVHANILKDADQIWSVNFKGKTL-VAAVEKDGQSFLE 350
Score = 29.5 bits (64), Expect = 0.41
Identities = 4/23 (17%), Positives = 10/23 (43%)
Query: 204 FSPNGKYILAATLDNTLKLWDSK 226
Y++ D ++++DS
Sbjct: 19 LQFEDNYVITGADDKMIRVYDSI 41
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 393
Score = 83.4 bits (204), Expect = 3e-19
Identities = 33/228 (14%), Positives = 73/228 (32%), Gaps = 43/228 (18%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWG------AYDGKFEKTISGHKLGISDV 75
+ ++ +SV S G +A+ + ++I Y+ + + ++ + I V
Sbjct: 179 SPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSV 237
Query: 76 AWSSDSRLLVSGSDDKTLKIW----------------ELSSGKCLKTLKGHSNYVFCCNF 119
+S LL D + S + HS++V +F
Sbjct: 238 KFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSF 297
Query: 120 NPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVS----AVHFNRDGSLIVSSSYDG 175
N + S +D +R WDV+T + + TL H D + + + G +
Sbjct: 298 NDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFD 357
Query: 176 LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 223
+ + + + + LD +++ +
Sbjct: 358 VKFLKKGWRSGM----------------GADLNESLCCVCLDRSIRWF 389
Score = 73.7 bits (179), Expect = 7e-16
Identities = 28/202 (13%), Positives = 57/202 (28%), Gaps = 49/202 (24%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS------GHKLGISDVAW- 77
H + SV + + S S D +K+W E HK G+ V
Sbjct: 12 AHDADIFSVSACNS--FTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVL 69
Query: 78 ------SSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQS-------- 123
+ + L+ + S L + ++ K + + + S
Sbjct: 70 QAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGA 129
Query: 124 -------NLIVSGSFDESVRIWDVRTGK------------------CLKTLPAHSDPVSA 158
+ +V+ + IW +++ S ++
Sbjct: 130 SNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATS 189
Query: 159 VHFNRDGSLIVSSSYDGLCRIW 180
V + G LI + +G +I
Sbjct: 190 VDISERG-LIATGFNNGTVQIS 210
Score = 68.7 bits (166), Expect = 4e-14
Identities = 25/202 (12%), Positives = 49/202 (24%), Gaps = 48/202 (23%)
Query: 67 GHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKC----LKTLKGH---------SNY 113
H I V+ + VS S D LK+W+ K+
Sbjct: 12 AHDADIFSVSACNS--FTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVL 69
Query: 114 VFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDG-------- 165
+ L+ + SF + + + K + + +
Sbjct: 70 QAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGA 129
Query: 166 -------SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP-----------------VSF 201
+V++ G IW + + P +
Sbjct: 130 SNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATS 189
Query: 202 VKFSPNGKYILAATLDNTLKLW 223
V S G I + T+++
Sbjct: 190 VDISERG-LIATGFNNGTVQIS 210
Score = 64.9 bits (156), Expect = 8e-13
Identities = 20/149 (13%), Positives = 45/149 (30%), Gaps = 29/149 (19%)
Query: 103 CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC------LKTLPAHSDPV 156
K H +F + + VS S D +++WD + + H +
Sbjct: 6 TANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGL 63
Query: 157 SAVHF-------NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF-------- 201
V + L+ ++S+ G + K +I + +
Sbjct: 64 HHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFW 123
Query: 202 -VKFSPNG-----KYILAATLDNTLKLWD 224
+K+ + ++A + T +W
Sbjct: 124 ALKWGASNDRLLSHRLVATDVKGTTYIWK 152
Score = 58.7 bits (140), Expect = 1e-10
Identities = 36/277 (12%), Positives = 88/277 (31%), Gaps = 62/277 (22%)
Query: 9 SSSNPKPNYVLKFTLAGHTKAVSSVKF-------SPNGEWLASSSADKLIKIWGAYDGKF 61
+ + ++ H + V + +A++S + +
Sbjct: 42 KLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDE 101
Query: 62 EKTISGHKLG----------ISDVAWSSDS-----RLLVSGSDDKTLKIWELSSGK---- 102
K + KL + W + + LV+ T IW+
Sbjct: 102 TKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESN 161
Query: 103 --------------CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI------WDVRT 142
+++ S + + + LI +G + +V+I +
Sbjct: 162 SLTLNWSPTLELQGTVESPMTPSQFATSVDISE-RGLIATGFNNGTVQISELSTLRPLYN 220
Query: 143 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG---LCRIWDTASGQCLKTLIDDDNP-- 197
+ ++ +S+ + +V F+ GSL+ + +++T G+ + +L +
Sbjct: 221 FESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQ 280
Query: 198 ----------PVSFVKFSPNGKYILAATLDNTLKLWD 224
V + F+ +G+ + +A D L+ WD
Sbjct: 281 ASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWD 317
Score = 49.9 bits (117), Expect = 1e-07
Identities = 23/134 (17%), Positives = 40/134 (29%), Gaps = 19/134 (14%)
Query: 9 SSSNPKPNYVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH 68
S S P + H+ V S+ F+ +GE L S+ D ++ W + T++ H
Sbjct: 271 SLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMH 330
Query: 69 KLGISD----VAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSN 124
I +A L + L G +
Sbjct: 331 CDDIEIEEDILAVDEHGDSLAEPG---VFDVKFLKKGWRSGMGADL------------NE 375
Query: 125 LIVSGSFDESVRIW 138
+ D S+R +
Sbjct: 376 SLCCVCLDRSIRWF 389
Score = 27.1 bits (58), Expect = 2.2
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 205 SPNGKYILAATLDNTLKLWDSK 226
S + ++ + D LK+WD+K
Sbjct: 21 SACNSFTVSCSGDGYLKVWDNK 42
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 337
Score = 82.5 bits (202), Expect = 4e-19
Identities = 24/116 (20%), Positives = 46/116 (39%), Gaps = 2/116 (1%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLL 84
T + S+ + P GEWLA +++ + H+ + + ++ +
Sbjct: 222 DFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHL-HESCVLSLKFAYCGKWF 280
Query: 85 VSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 140
VS D L W G + S+ V C+ + IV+GS D+ +++V
Sbjct: 281 VSTGKDNLLNAWRTPYGASIFQS-KESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335
Score = 77.2 bits (188), Expect = 3e-17
Identities = 15/72 (20%), Positives = 24/72 (33%), Gaps = 1/72 (1%)
Query: 110 HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIV 169
H + V F VS D + W G + S V + + D IV
Sbjct: 264 HESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS-KESSSVLSCDISVDDKYIV 322
Query: 170 SSSYDGLCRIWD 181
+ S D +++
Sbjct: 323 TGSGDKKATVYE 334
Score = 75.6 bits (184), Expect = 1e-16
Identities = 41/259 (15%), Positives = 74/259 (28%), Gaps = 48/259 (18%)
Query: 10 SSNPKPNYVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK 69
S + V + + S K P+G L + IW
Sbjct: 80 SHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTS 139
Query: 70 LGIS--------------------------------------------DVAWSSDSRLLV 85
+ + S+D L
Sbjct: 140 SAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLW 199
Query: 86 SGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 145
+G D T++ W+L G+ L+ ++ +F + P + G +V + V
Sbjct: 200 TGGLDNTVRSWDLREGRQLQQ-HDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDK 258
Query: 146 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 205
+ H V ++ F G VS+ D L W T G + + V S
Sbjct: 259 YQL-HLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESS--SVLSCDIS 315
Query: 206 PNGKYILAATLDNTLKLWD 224
+ KYI+ + D +++
Sbjct: 316 VDDKYIVTGSGDKKATVYE 334
Score = 67.1 bits (162), Expect = 1e-13
Identities = 37/261 (14%), Positives = 78/261 (29%), Gaps = 53/261 (20%)
Query: 15 PNYVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS-----GHK 69
P + + H + V +V S + + +K+W + +S
Sbjct: 39 PRHARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRD 97
Query: 70 LGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNY---------------- 113
I D L+ G + TL IW+L++ + S+
Sbjct: 98 NYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCF 157
Query: 114 ----------------------------VFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 145
C + + + +G D +VR WD+R G+
Sbjct: 158 SCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQ 217
Query: 146 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 205
L+ + + ++ + G + + + + + +KF+
Sbjct: 218 LQQ-HDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVL--SLKFA 274
Query: 206 PNGKYILAATLDNTLKLWDSK 226
GK+ ++ DN L W +
Sbjct: 275 YCGKWFVSTGKDNLLNAWRTP 295
Score = 64.4 bits (155), Expect = 9e-13
Identities = 25/131 (19%), Positives = 47/131 (35%), Gaps = 8/131 (6%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLA-SSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 79
F A +K S + +G+ D LI + T+ H + V S+
Sbjct: 3 FQGAMGSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTL-NHGEVVCAVTISN 61
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTL-----KGHSNYVFCCNFNPQSNLIVSGSFDES 134
+R + +G +K+W++S + NY+ C P ++ G +
Sbjct: 62 PTRHVYTGGKG-CVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEAST 120
Query: 135 VRIWDVRTGKC 145
+ IWD+
Sbjct: 121 LSIWDLAAPTP 131
Score = 44.4 bits (103), Expect = 5e-06
Identities = 16/74 (21%), Positives = 26/74 (35%), Gaps = 4/74 (5%)
Query: 152 HSDPVSAVHFNRDGSL-IVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKY 210
S P + H DG + V D L + + TL + V V S ++
Sbjct: 8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGE--VVCAVTISNPTRH 65
Query: 211 ILAATLDNTLKLWD 224
+ +K+WD
Sbjct: 66 VYTGG-KGCVKVWD 78
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 355
Score = 79.4 bits (194), Expect = 6e-18
Identities = 24/205 (11%), Positives = 51/205 (24%), Gaps = 28/205 (13%)
Query: 8 SSSSNPKPNYVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK--FEKTI 65
+ + ++ +S L + I G F +
Sbjct: 175 FGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAV 234
Query: 66 SGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNL 125
W V+ Q +
Sbjct: 235 EALTEAERADGWRPGGWQQVAYHRALDRIYL----------------------LVDQRDE 272
Query: 126 IVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGS--LIVSSSYDGLCRIWDTA 183
+ V + D +TG+ L + +++ ++D L S+ D I D
Sbjct: 273 WRHKTASRFVVVLDAKTGERLAKFE-MGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAE 331
Query: 184 SGQCLKTLIDDDNPPVSFVKFSPNG 208
SG+ L+++ + P + + G
Sbjct: 332 SGEELRSVNQLGHGP-QVITTADMG 355
Score = 63.7 bits (153), Expect = 2e-12
Identities = 27/222 (12%), Positives = 55/222 (24%), Gaps = 32/222 (14%)
Query: 7 PSSSSNPKPNYVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS 66
+ + V T + +G + + E
Sbjct: 136 LEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHT----EVFHP 191
Query: 67 GHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKC--LKTLKGHSNYVFCCNFNPQSN 124
+ I+ A+S + LV + + +LSSG L ++ + + P
Sbjct: 192 EDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGW 251
Query: 125 LIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 184
V+ + + D +
Sbjct: 252 QQVAYHRALDRIYL----------------------LVDQRDEWRHKTASRFVVVLDAKT 289
Query: 185 GQCLKTLIDDDNPPVSFVKFSPNGKYILAAT--LDNTLKLWD 224
G+ L + + + S + K +L A D TL + D
Sbjct: 290 GERLAKF--EMGHEIDSINVSQDEKPLLYALSTGDKTLYIHD 329
Score = 57.5 bits (137), Expect = 2e-10
Identities = 23/187 (12%), Positives = 53/187 (28%), Gaps = 33/187 (17%)
Query: 75 VAWSSDSRLL-----VSGSDDKTLKIWELSSGKCLKTLKGHS----------NYVFCCNF 119
A + D+R + + + + +G+ + + G +++ +
Sbjct: 7 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLPNPVVADDGSFIAHAST 66
Query: 120 NPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLI---------VS 170
+ I G + V ++D T + P V + +
Sbjct: 67 V--FSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQ 124
Query: 171 SSYDGLCRIWDTASGQCLKTLIDDDNP------PVSFVKFSPNGKYIL-AATLDNTLKLW 223
S + D + L D P +F +G A + T ++
Sbjct: 125 FSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEIT 184
Query: 224 DSKVVTP 230
++V P
Sbjct: 185 HTEVFHP 191
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Pseudomonas putida [TaxId: 303]}
Length = 346
Score = 79.4 bits (194), Expect = 7e-18
Identities = 29/242 (11%), Positives = 65/242 (26%), Gaps = 46/242 (19%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSAD------------KLIKIWGAYDGKFEKTISGHKL-- 70
+++ S SP+G+ + ++ ++++ DG K + +
Sbjct: 86 EVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPR 145
Query: 71 GISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHS------------------- 111
+ + + D L V+G D ++ +GK L +
Sbjct: 146 QVYLMRAADDGSLYVAGPDIY---KMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQS 202
Query: 112 ------NYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPA-HSDPVSAVHFNRD 164
F + D++TGK A ++ +
Sbjct: 203 PRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPK 262
Query: 165 GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
+ +D + +K D V F G + N L +++
Sbjct: 263 DPNQIYGV-LNRLAKYDLKQRKLIKAANLDHTY--YCVAFDKKGDKLYLGGTFNDLAVFN 319
Query: 225 SK 226
Sbjct: 320 PD 321
Score = 78.6 bits (192), Expect = 1e-17
Identities = 14/118 (11%), Positives = 39/118 (33%), Gaps = 3/118 (2%)
Query: 75 VAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKG-HSNYVFCCNFNPQSNLIVSGSFDE 133
+ D + + +L +GK + F +P+ + G +
Sbjct: 214 ARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLNR 273
Query: 134 SVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 191
+ +D++ K +K V F++ G + +++ + + +K +
Sbjct: 274 -LAKYDLKQRKLIKAAN-LDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNI 329
Score = 74.8 bits (182), Expect = 2e-16
Identities = 25/240 (10%), Positives = 55/240 (22%), Gaps = 49/240 (20%)
Query: 33 VKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS-GHKLGISDVAWSSD-SRLLVSGSDD 90
E++ ++ + + K+ K G + D V +
Sbjct: 2 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHY 61
Query: 91 KTLKIWELSSGKCLKTL------KGHSNYVFCCNFNPQSNLIVSGSFDES---------- 134
+ +L + K ++ +P + +
Sbjct: 62 GDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKP 121
Query: 135 --VRIWDVRTGKCLKTLPAHS--DPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 190
+ ++ G K + V + DGSL V+ D +G+
Sbjct: 122 PRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPD---IYKMDVKTGKYTVA 178
Query: 191 LIDDDNP------------------------PVSFVKFSPNGKYILAATLDNTLKLWDSK 226
L + + +F + + A L D K
Sbjct: 179 LPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLK 238
Score = 74.0 bits (180), Expect = 6e-16
Identities = 16/135 (11%), Positives = 44/135 (32%), Gaps = 3/135 (2%)
Query: 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE-KTISGHKLGISDVAWSSDSRLL 84
+ + +F + + A++ GK + + S
Sbjct: 207 FSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQ 266
Query: 85 VSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK 144
+ G + L ++L K +K + +C F+ + + + G + +++ T +
Sbjct: 267 IYGVLN-RLAKYDLKQRKLIKAAN-LDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLE 324
Query: 145 CLKTLPAHSDPVSAV 159
+K + +S
Sbjct: 325 KVKNIKLPGGDMSTT 339
Score = 65.1 bits (157), Expect = 7e-13
Identities = 15/184 (8%), Positives = 45/184 (24%), Gaps = 21/184 (11%)
Query: 75 VAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLK-GHSNYVFCCNFNPQSN-LIVSGSFD 132
A + ++ + L + +++S K+ P + V +
Sbjct: 2 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHY 61
Query: 133 ESVRIWDVRTGKCLKTLP------AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 186
+ D+ T K + + + DG + ++
Sbjct: 62 GDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKP 121
Query: 187 CLKTLIDDDNP-------------PVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAII 233
+ + V ++ + +G +A + + K +
Sbjct: 122 PRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALPL 181
Query: 234 CSTP 237
+
Sbjct: 182 RNWN 185
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 299
Score = 75.8 bits (184), Expect = 9e-17
Identities = 17/86 (19%), Positives = 32/86 (37%), Gaps = 1/86 (1%)
Query: 101 GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLP-AHSDPVSAV 159
G + GH+ + + + + S + + WD+ TG + P H+ ++ +
Sbjct: 2 GSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGI 61
Query: 160 HFNRDGSLIVSSSYDGLCRIWDTASG 185
G L S D L + SG
Sbjct: 62 KTTSKGDLFTVSWDDHLKVVPAGGSG 87
Score = 72.3 bits (175), Expect = 1e-15
Identities = 14/88 (15%), Positives = 34/88 (38%), Gaps = 2/88 (2%)
Query: 59 GKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTL-KGHSNYVFCC 117
G ++ GH I+ ++ S+D + L S + + W++S+G + H+ +
Sbjct: 2 GSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGI 61
Query: 118 NFNPQSNLIVSGSFDESVRIWDVRTGKC 145
+ +L D +++
Sbjct: 62 KTTSKGDLFTVSWDDH-LKVVPAGGSGV 88
Score = 65.0 bits (156), Expect = 6e-13
Identities = 12/62 (19%), Positives = 27/62 (43%)
Query: 143 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 202
G + H+ ++A+ + DG + S+ +G WD ++G + D ++ +
Sbjct: 2 GSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGI 61
Query: 203 KF 204
K
Sbjct: 62 KT 63
Score = 61.2 bits (146), Expect = 1e-11
Identities = 22/123 (17%), Positives = 42/123 (34%), Gaps = 3/123 (2%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS-GHKLGISDVAW 77
+ GH KA++++ S +G+ L S+ A+ I W G + H I+ +
Sbjct: 4 IDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKT 63
Query: 78 SSDSRLLVSGSDDKTLKIWELSSG--KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 135
+S L DD + SG S+ + ++ V+ +
Sbjct: 64 TSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIA 123
Query: 136 RIW 138
Sbjct: 124 IYS 126
Score = 56.5 bits (134), Expect = 4e-10
Identities = 17/74 (22%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 110 HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVH--FNRDGSL 167
H+ V C +++P + + +GS D SV +W++ + + +S+V+ + +
Sbjct: 223 HTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETT 282
Query: 168 IVSSSYDGLCRIWD 181
IVS+ D + W+
Sbjct: 283 IVSAGQDSNIKFWN 296
Score = 53.8 bits (127), Expect = 4e-09
Identities = 11/58 (18%), Positives = 23/58 (39%), Gaps = 2/58 (3%)
Query: 85 VSGSDDKTLKIWELSSGKCLKTL--KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 140
+GS D ++ +W ++ + H+ IVS D +++ W+V
Sbjct: 240 ATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWNV 297
Score = 50.8 bits (119), Expect = 4e-08
Identities = 13/65 (20%), Positives = 23/65 (35%), Gaps = 2/65 (3%)
Query: 37 PNGEWLASSSADKLIKIWGAYDGKFEKTIS--GHKLGISDVAWSSDSRLLVSGSDDKTLK 94
P+ LA+ S D + +W I H + + + +VS D +K
Sbjct: 234 PDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIK 293
Query: 95 IWELS 99
W +
Sbjct: 294 FWNVP 298
Score = 46.5 bits (108), Expect = 9e-07
Identities = 16/123 (13%), Positives = 34/123 (27%), Gaps = 1/123 (0%)
Query: 103 CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFN 162
V N + + + H+ V+ V ++
Sbjct: 174 KTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWS 233
Query: 163 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP-PVSFVKFSPNGKYILAATLDNTLK 221
D + + S D +W+ +I + N I++A D+ +K
Sbjct: 234 PDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIK 293
Query: 222 LWD 224
W+
Sbjct: 294 FWN 296
Score = 37.7 bits (85), Expect = 8e-04
Identities = 9/41 (21%), Positives = 14/41 (34%)
Query: 14 KPNYVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 54
KP+ H + + N + S+ D IK W
Sbjct: 255 KPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFW 295
Score = 36.5 bits (82), Expect = 0.002
Identities = 7/40 (17%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Query: 185 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
G + + ++ + S +GK + +A + + WD
Sbjct: 2 GSIDQVRYGHNKA-ITALSSSADGKTLFSADAEGHINSWD 40
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 311
Score = 75.7 bits (184), Expect = 1e-16
Identities = 36/257 (14%), Positives = 78/257 (30%), Gaps = 54/257 (21%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG--KFEKTISGHKLGISDVAWSS 79
H+ + K SP+G + AS ++IW + TI + D++W S
Sbjct: 53 IYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDS 112
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFC----------------------- 116
+S+ + + + +
Sbjct: 113 ESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVA 172
Query: 117 ----------------------CNFNPQSNLIVSGSFDESVRIWDVRTGKCLKT------ 148
+NP +L S D ++ +++ G
Sbjct: 173 IFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSL 232
Query: 149 -LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPN 207
AHS V + ++ DG+ I S+S D +IW+ A+ + KT+ +
Sbjct: 233 KNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWT 292
Query: 208 GKYILAATLDNTLKLWD 224
+ +++ + + + +
Sbjct: 293 KQALVSISANGFINFVN 309
Score = 57.6 bits (137), Expect = 2e-10
Identities = 18/92 (19%), Positives = 26/92 (28%), Gaps = 2/92 (2%)
Query: 97 ELSSGKCLKTLKGHS-NYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDP 155
E S +L + P + I + SV V + + HS
Sbjct: 2 EFSQTALFPSLPRTARGTAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQ 60
Query: 156 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC 187
+ + G S G RIWDT
Sbjct: 61 TTVAKTSPSGYYCASGDVHGNVRIWDTTQTTH 92
Score = 56.8 bits (135), Expect = 3e-10
Identities = 11/71 (15%), Positives = 22/71 (30%), Gaps = 1/71 (1%)
Query: 75 VAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 134
+ + + + ++ + S + HS+ +P SG +
Sbjct: 23 LGNTPAGDKIQYCNGT-SVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGN 81
Query: 135 VRIWDVRTGKC 145
VRIWD
Sbjct: 82 VRIWDTTQTTH 92
Score = 55.7 bits (132), Expect = 9e-10
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 34 KFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH-KLGISDVAWSSDSRLLVSGSDDKT 92
+SP+G +AS+SADK IKIW K EKTI ++ + + LVS S +
Sbjct: 245 TWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGF 304
Query: 93 LKIWEL 98
+
Sbjct: 305 INFVNP 310
Score = 54.9 bits (130), Expect = 2e-09
Identities = 12/98 (12%), Positives = 30/98 (30%), Gaps = 3/98 (3%)
Query: 30 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSD 89
+ +P G+ + + + + + H + S SG
Sbjct: 20 AVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDV 78
Query: 90 DKTLKIWELSSG--KCLKTLKGHSNYVFCCNFNPQSNL 125
++IW+ + T+ S V +++ +S
Sbjct: 79 HGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKR 116
Score = 31.8 bits (70), Expect = 0.065
Identities = 7/37 (18%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Query: 19 LKFTLAGHTK-AVSSVKFSPNGEWLASSSADKLIKIW 54
++ T+ T+ + + L S SA+ I
Sbjct: 272 VEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFV 308
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 337
Score = 74.5 bits (181), Expect = 3e-16
Identities = 18/136 (13%), Positives = 40/136 (29%), Gaps = 4/136 (2%)
Query: 68 HKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKT-LKGHSNYVFCCNFNPQSNLI 126
+ D + L +L +G+ ++ + F NP
Sbjct: 196 GVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRA 255
Query: 127 VSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 186
+ +D+ +K +P +V+ + DGS + G +D + +
Sbjct: 256 FG--AYNVLESFDLEKNASIKRVP-LPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLE 312
Query: 187 CLKTLIDDDNPPVSFV 202
+ N +S
Sbjct: 313 KKGQVDLPGNASMSLA 328
Score = 67.5 bits (163), Expect = 8e-14
Identities = 13/143 (9%), Positives = 40/143 (27%), Gaps = 6/143 (4%)
Query: 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV 85
A + + ++ + G+ + + + + +
Sbjct: 196 GVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRI-MDVFYFSTAVNPAKTR 254
Query: 86 SGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 145
+ L+ ++L +K + + + N + + + G + +D T +
Sbjct: 255 AFGAYNVLESFDLEKNASIKRV-PLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEK 313
Query: 146 LKTLPAHSDP----VSAVHFNRD 164
+ + S F RD
Sbjct: 314 KGQVDLPGNASMSLASVRLFTRD 336
Score = 64.4 bits (155), Expect = 1e-12
Identities = 25/235 (10%), Positives = 61/235 (25%), Gaps = 39/235 (16%)
Query: 26 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF-----------EKTISGHKLGISD 74
K++ SP+G+ LA + +++ + I+
Sbjct: 80 RVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITM 139
Query: 75 VAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCC----------------- 117
+AW+ D L D + + +G ++ S
Sbjct: 140 LAWARDGSKLYGLGRDL--HVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGV 197
Query: 118 ------NFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSS 171
+ ++ + D+ TG+ V + + +
Sbjct: 198 MATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRI-MDVFYFSTAVNPAKTRAF 256
Query: 172 SYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSK 226
+ +D +K + + V S +G + L +D++
Sbjct: 257 GAYNVLESFDLEKNASIKRVPLPHSY--YSVNVSTDGSTVWLGGALGDLAAYDAE 309
Score = 62.1 bits (149), Expect = 6e-12
Identities = 20/211 (9%), Positives = 59/211 (27%), Gaps = 25/211 (11%)
Query: 40 EWLASSSADKLIKIWGAYDGKFEKTISGHKLGIS--DVAWSSD-SRLLVSGSDDKTLKIW 96
+++ + + + + +K I+ G + + + + ++L
Sbjct: 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKI 61
Query: 97 ELSSGKCLKTLKGHS-----------------NYVFCCNFNPQSNLIVSGSFDESVRIWD 139
+L +G+ L + + + + L V ++D
Sbjct: 62 DLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYD 121
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 199
T K ++ + + RDGS + D + D +G ++
Sbjct: 122 AETLSRRKAFE-APRQITMLAWARDGSKLYGLGRD--LHVMDPEAGTLVEDKPIQSWEAE 178
Query: 200 SFVKFSPNGKYILAATLDNTLKLWDSKVVTP 230
++ P+ + + +
Sbjct: 179 TY--AQPDVLAVWNQHESSGVMATPFYTARK 207
Score = 60.6 bits (145), Expect = 2e-11
Identities = 16/180 (8%), Positives = 47/180 (26%), Gaps = 18/180 (10%)
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLK--GHSNYVFCCNFNPQSN-LIVSGSFDESVRIW 138
+++ + L + + K + P + + ES+
Sbjct: 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKI 61
Query: 139 DVRTGKCLKTLPAHS-----DPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 193
D+ TG+ L + + + + DG + + L D
Sbjct: 62 DLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYD 121
Query: 194 ----------DDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIICSTPLNLNYF 243
+ ++ + ++ +G + D + ++ + + Y
Sbjct: 122 AETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYA 181
Score = 40.9 bits (94), Expect = 7e-05
Identities = 7/54 (12%), Positives = 16/54 (29%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
+ SV S +G + A + + A + + + +A
Sbjct: 277 PLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLPGNASMSLASV 330
>gi|206564140|ref|YP_002234903.1|(51-382:385) putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|198040180|emb|CAR56163.1| putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|194561004|ref|YP_002096029.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|124876520|gb|EAY66510.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|170737581|ref|YP_001778841.1| amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|169819769|gb|ACA94351.1| Amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|78061451|ref|YP_371359.1| amine dehydrogenase
[Burkholderia sp. 383] gi|77969336|gb|ABB10715.1|
Amine dehydrogenase [Burkholderia sp. 383]
gi|107025662|ref|YP_623173.1| amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116693156|ref|YP_838689.1| amine dehydrogenase
[Burkholderia cenocepacia HI2424]
gi|105895036|gb|ABF78200.1| Amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116651156|gb|ABK11796.1| Amine dehydrogenase
[Burkholderia cenocepacia HI2424] E=8e-14 s/c=0.25
id=29% cov=82%
Length = 321
Score = 73.5 bits (179), Expect = 6e-16
Identities = 24/203 (11%), Positives = 53/203 (26%), Gaps = 26/203 (12%)
Query: 53 IWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV----------SGSDDKTLKIWELSSGK 102
++ A K I G A + D + V G+ ++I + ++
Sbjct: 2 VYDADAKKLLGQIDGGF--GPGFAIAPDRKASVVATTYFSRGSHGTRTDVVEIIDNTTLD 59
Query: 103 CLKTLKGHSNYVFCCNFNPQS------NLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPV 156
+ + + + + + + + + + D
Sbjct: 60 HAGEIVIPAKHAQHVPSPYNTAFSADGKRLYVANITPAASVTVIDAVSKKML--SEIDTA 117
Query: 157 SAVHFNRDGS-LIVSSSYDGL-CRIWDTASGQCLKTLIDD-DNPPVSFVKFSPNGKY--- 210
+ V G + G + A+G+ K + D F +Y
Sbjct: 118 ACVLAYPAGDDRFTALCESGKALTVTLDANGKEAKRTMSDAFIDVDKDPAFVNASRYKGD 177
Query: 211 ILAATLDNTLKLWDSKVVTPAII 233
L T ++ D PA
Sbjct: 178 YLFTTYGGNVRSADFSGDKPAFG 200
Score = 70.8 bits (172), Expect = 6e-15
Identities = 27/216 (12%), Positives = 60/216 (27%), Gaps = 32/216 (14%)
Query: 20 KFTLAGHTKAVSSVKFSPNGEWL--ASSSADKLIKIWGAYDGKFEK--TISGHKLGISDV 75
+ + V P G+ A + K + + +GK K D
Sbjct: 107 SKKMLSEIDTAACVLAYPAGDDRFTALCESGKALTVTLDANGKEAKRTMSDAFIDVDKDP 166
Query: 76 AWSSDSR---LLVSGSDDKTLKIWELSSGK--CLKTLKGHSNYVFCCNFNPQSNLIVSGS 130
A+ + SR + + ++ + S K K ++ + P +
Sbjct: 167 AFVNASRYKGDYLFTTYGGNVRSADFSGDKPAFGKPWSLLTDAERAEGWRPGGMQQTAVQ 226
Query: 131 FDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 190
++ + G T +H DP + V + Q ++
Sbjct: 227 AKQNRYYVLMHKG----TDGSHKDP--------GTQVWVYDLKSKQRVARWDLAQQKVEP 274
Query: 191 LIDDDNPPVSFVKFSPNGKYILAAT--LDNTLKLWD 224
L ++ S + K + + + + D
Sbjct: 275 L--------VSIQVSEDDKPLFYGLTATSDLV-VMD 301
Score = 70.4 bits (171), Expect = 7e-15
Identities = 16/162 (9%), Positives = 37/162 (22%), Gaps = 24/162 (14%)
Query: 41 WLASSSADKLIKIWGAYDGK--FEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWEL 98
++ ++ K F K S W + + +
Sbjct: 177 DYLFTTYGGNVRSADFSGDKPAFGKPWSLLTDAERAEGWRPGGMQQTAVQAKQNRYYVLM 236
Query: 99 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSA 158
G T H + P + + V + + ++ L +
Sbjct: 237 HKG----TDGSHKD--------PGTQVWVYDLKSKQRVARWDLAQQKVEPLV-------S 277
Query: 159 VHFNRDG--SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 198
+ + D ++ L + D +G N
Sbjct: 278 IQVSEDDKPLFYGLTATSDLV-VMDARTGALQHVEKQIGNTS 318
Score = 62.3 bits (150), Expect = 5e-12
Identities = 18/140 (12%), Positives = 38/140 (27%), Gaps = 22/140 (15%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
+ T A + + P G + A + + G T HK +
Sbjct: 202 PWSLLTDAERAEGWRPGGMQQTAVQAKQNRYYVLMHKG----TDGSHK--------DPGT 249
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNP--QSNLIVSGSFDESVRIWD 139
++ V K + + ++ L + + + + V + D
Sbjct: 250 QVWVYDLKSKQRVARWDLAQQKVEPLVS-------IQVSEDDKPLFYGLTATSDLV-VMD 301
Query: 140 VRTGKCLKTLPAHSDPVSAV 159
RTG + S +
Sbjct: 302 ARTGALQHVEKQIGNTSSLL 321
Score = 52.7 bits (125), Expect = 9e-09
Identities = 9/104 (8%), Positives = 22/104 (21%), Gaps = 17/104 (16%)
Query: 136 RIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY----------DGLCRIWDTASG 185
++D K L + P D V ++ + I D +
Sbjct: 1 YVYDADAKKLLGQIDGGFGP--GFAIAPDRKASVVATTYFSRGSHGTRTDVVEIIDNTTL 58
Query: 186 QCLKTLIDDDNPPVSF--VKFSPNGK---YILAATLDNTLKLWD 224
++ + + A + +
Sbjct: 59 DHAGEIVIPAKHAQHVPSPYNTAFSADGKRLYVANITPAASVTV 102
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 368
Score = 73.1 bits (178), Expect = 1e-15
Identities = 20/186 (10%), Positives = 53/186 (28%), Gaps = 26/186 (13%)
Query: 8 SSSSNPKPNYVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG 67
+++ V + + + + G + + ++ L A + I G
Sbjct: 192 LAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDG 251
Query: 68 HKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 127
++ G + S +V+ + +
Sbjct: 252 NESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHS-----------------------RS 288
Query: 128 SGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGS--LIVSSSYDGLCRIWDTASG 185
+ E+ G+ + + A+ +DG+ +S+ + I+D AS
Sbjct: 289 CLAAAENTSSVTASVGQTSGPIS-NGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASD 347
Query: 186 QCLKTL 191
Q ++
Sbjct: 348 QDQSSV 353
Score = 60.8 bits (146), Expect = 2e-11
Identities = 16/196 (8%), Positives = 34/196 (17%), Gaps = 24/196 (12%)
Query: 66 SGHKLGISDVAWSSDSRLLVSGSDDKTLKIW--ELSSGKCLKTLKGHSNYV--------F 115
G A S S + + T + W G L G +
Sbjct: 19 DGSSCDHGPGAISRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLSLAVAGHSGSD 78
Query: 116 CCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSA-------VHFNRDGS-L 167
+ G + V ++D T + + P + + + L
Sbjct: 79 FALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACL 138
Query: 168 IVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS------FVKFSPNGKYILAATLDNTLK 221
+ + + S +
Sbjct: 139 LFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAA 198
Query: 222 LWDSKVVTPAIICSTP 237
+
Sbjct: 199 AGIVGAQCTGAQNCSS 214
Score = 32.6 bits (73), Expect = 0.035
Identities = 6/47 (12%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Query: 25 GHTKAVSSVKFSPNGEWL--ASSSADKLIKIWGAYDGKFEKTISGHK 69
+ ++ + +G A+S+ +++ I+ A + + ++ K
Sbjct: 311 SNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDK 357
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 342
Score = 72.6 bits (176), Expect = 2e-15
Identities = 20/155 (12%), Positives = 47/155 (30%), Gaps = 21/155 (13%)
Query: 89 DDKTLKIWELSSGKCLKTLKGHSNY----VFCCNFNPQSNLIVSGSFDESVRIWDVRTG- 143
++ ++ + L + S + S D V +
Sbjct: 168 NNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQG 227
Query: 144 --------------KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLK 189
+ + PV+++ F+ + ++ DG+ W+ + + +K
Sbjct: 228 DDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIK 287
Query: 190 TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
+ S VK + + + AT D+T K
Sbjct: 288 NFAKFN--EDSVVKIACSDNILCLATSDDTFKTNA 320
Score = 71.8 bits (174), Expect = 3e-15
Identities = 17/217 (7%), Positives = 59/217 (27%), Gaps = 14/217 (6%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI---SGHKLGISDVAWS 78
+S +K P+ L +S D + ++ + +K + +
Sbjct: 6 IEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFI 65
Query: 79 SDS-RLLVSGSDDKTLKIWELSS-GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 136
++ + G+ + +L +N C + +++ S+D +
Sbjct: 66 DNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIE 125
Query: 137 IWDVRTGKCLKTLPAHSDPVSAV------HFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 190
+ D R + + + + + S ++ + + + +
Sbjct: 126 VIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNG 185
Query: 191 ---LIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
+ +++D + +
Sbjct: 186 TIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEF 222
Score = 68.3 bits (165), Expect = 5e-14
Identities = 17/87 (19%), Positives = 31/87 (35%), Gaps = 4/87 (4%)
Query: 63 KTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLK---GHSNYVFCCNF 119
+ K ISD+ LL+ S D +L +++ L + + + CCNF
Sbjct: 5 QIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNF 64
Query: 120 NPQS-NLIVSGSFDESVRIWDVRTGKC 145
+ I G+ + D+
Sbjct: 65 IDNTDLQIYVGTVQGEILKVDLIGSPS 91
Score = 68.0 bits (164), Expect = 6e-14
Identities = 15/163 (9%), Positives = 42/163 (25%), Gaps = 20/163 (12%)
Query: 38 NGEWLASSSADKLIKIWGAYDGKFEKTI----SGHKLGISDVAWSSDSRLLVSGSDDKTL 93
N L + ++ + + + + S D +
Sbjct: 159 NSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRV 218
Query: 94 KIWELSSG---------------KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
+ + + V F+P+ + + D + W
Sbjct: 219 AVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCW 278
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 181
+++T K +K + S V +++ ++ D +
Sbjct: 279 NLQTRKKIKNFAKF-NEDSVVKIACSDNILCLATSDDTFKTNA 320
Score = 67.6 bits (163), Expect = 8e-14
Identities = 16/141 (11%), Positives = 42/141 (29%), Gaps = 20/141 (14%)
Query: 35 FSPNGEWLASSSADKLIKIWGAYDG---------------KFEKTISGHKLGISDVAWSS 79
E A SS D + + D + + ++ + +S
Sbjct: 202 LPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSP 261
Query: 80 DSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 139
+ L + D + W L + K +K + N++ + D++ +
Sbjct: 262 RHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNE-DSVVKIACSDNILCLATSDDTFKTN- 319
Query: 140 VRTGKCLKTLPAHSDPVSAVH 160
+T+ ++ + +
Sbjct: 320 ---AAIDQTIELNASSIYIIF 337
Score = 66.8 bits (161), Expect = 2e-13
Identities = 12/90 (13%), Positives = 30/90 (33%), Gaps = 4/90 (4%)
Query: 102 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC---LKTLPAHSDPVSA 158
+ ++ + +Y+ P +L++ S+D S+ ++ L + P+
Sbjct: 2 QIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLC 61
Query: 159 VHFNRD-GSLIVSSSYDGLCRIWDTASGQC 187
+F + I + G D
Sbjct: 62 CNFIDNTDLQIYVGTVQGEILKVDLIGSPS 91
Score = 62.2 bits (149), Expect = 6e-12
Identities = 21/108 (19%), Positives = 43/108 (39%), Gaps = 5/108 (4%)
Query: 8 SSSSNPKPNYVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG 67
SS + L V+S++FSP ++L ++ +D +I W K K +
Sbjct: 232 SSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAK 291
Query: 68 HKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVF 115
S V + +L + D T K +T++ +++ ++
Sbjct: 292 FN-EDSVVKIACSDNILCLATSDDTFKTN----AAIDQTIELNASSIY 334
Score = 60.2 bits (144), Expect = 2e-11
Identities = 12/72 (16%), Positives = 26/72 (36%), Gaps = 2/72 (2%)
Query: 144 KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLI--DDDNPPVSF 201
+ ++ A D +S + SL++ +S+DG ++ L+ P+
Sbjct: 2 QIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLC 61
Query: 202 VKFSPNGKYILA 213
F N +
Sbjct: 62 CNFIDNTDLQIY 73
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 325
Score = 66.9 bits (161), Expect = 1e-13
Identities = 46/278 (16%), Positives = 79/278 (28%), Gaps = 65/278 (23%)
Query: 12 NPKPNYVLKFTLAGH-TKAVSSVKFSP--NGEWLASSSADKLIKIWGAYDGKFEKTI--- 65
+ GH + V++VKFSP ++L S + +WG K ++
Sbjct: 47 DGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVN 106
Query: 66 -----SGHKLGISDVAWSSDSRLLVSGSD--DKTLKIWELSSGKCLKTLKGHSNYVFCCN 118
ISD++W + R L + D SG L + GHS + C+
Sbjct: 107 VKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACH 166
Query: 119 FNPQSNLIVSGSFDESVR----IWDVRTGKCLKTLPAHSDPVSAVHFNR----------- 163
+ D+ + +T V V F+
Sbjct: 167 LKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGS 226
Query: 164 -----------------------------------DGSLIVSSSYDGLCRIWDTASGQCL 188
D + D R+WD + +C+
Sbjct: 227 DRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCV 286
Query: 189 KTLIDDDNP-PVSFVKFSPNG-KYILAATLDNTLKLWD 224
+ D V G I++ +LD TL ++
Sbjct: 287 QKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYE 324
Score = 62.2 bits (149), Expect = 5e-12
Identities = 11/68 (16%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Query: 76 AWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFC---CNFNPQSNLIVSGSFD 132
DS+ + D T+++W++++ KC++ + + I+S S D
Sbjct: 258 LSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLD 317
Query: 133 ESVRIWDV 140
++ +++
Sbjct: 318 GTLNFYEL 325
Score = 53.4 bits (126), Expect = 6e-09
Identities = 22/167 (13%), Positives = 56/167 (33%), Gaps = 16/167 (9%)
Query: 30 VSSVKFSPNGEWLASSSADK-LIKIWGAYDGKFEK--TISGHKLG-ISDVAWS--SDSRL 83
+ + + P +A ++ D K +GH ++ V +S S+
Sbjct: 20 TTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQY 79
Query: 84 LVSGSDDKTLKIWELSSGKCLKTL--------KGHSNYVFCCNFNPQSNLIV--SGSFDE 133
L SG + + +W + K ++ + + + +++ + + D
Sbjct: 80 LCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDN 139
Query: 134 SVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 180
+G L + HS ++A H + + + D ++
Sbjct: 140 FGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVF 186
Score = 44.9 bits (104), Expect = 4e-06
Identities = 19/114 (16%), Positives = 38/114 (33%), Gaps = 13/114 (11%)
Query: 110 HSNYVFCCNFNPQSNLIVSGSFDES-VRIWDVRTGK--CLKTLPAH-SDPVSAVHF--NR 163
N+ +++P +N I + VR D K + H S V+ V F +
Sbjct: 16 QRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIK 75
Query: 164 DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP-------PVSFVKFSPNGKY 210
+ S G +W + ++ + P+S + + G+
Sbjct: 76 GSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRR 129
Score = 38.0 bits (86), Expect = 7e-04
Identities = 11/73 (15%), Positives = 24/73 (32%), Gaps = 5/73 (6%)
Query: 156 VSAVHFNRDGSLIVSSSYDGLC-RIWDTASG--QCLKTLIDDDNPPVSFVKFSP--NGKY 210
+ + ++ + I R D + + V+ VKFSP +Y
Sbjct: 20 TTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQY 79
Query: 211 ILAATLDNTLKLW 223
+ + + +W
Sbjct: 80 LCSGDESGKVIVW 92
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa
[TaxId: 287]}
Length = 426
Score = 65.4 bits (158), Expect = 7e-13
Identities = 15/165 (9%), Positives = 43/165 (26%), Gaps = 6/165 (3%)
Query: 75 VAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 134
+ V+ D + + + S K +K + V + ++ D
Sbjct: 26 NDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTG-YAVHISRMSASGRYLLVIGRDAR 84
Query: 135 VRIWDVRTGKC-----LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLK 189
+ + D+ + +K S+ + ++ +Y K
Sbjct: 85 IDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPK 144
Query: 190 TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVTPAIIC 234
++ V + P + + + T ++
Sbjct: 145 QIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLL 189
Score = 55.3 bits (132), Expect = 1e-09
Identities = 30/234 (12%), Positives = 75/234 (32%), Gaps = 47/234 (20%)
Query: 14 KPNYVLKFTLAGHTKAVSSVKFSPNGE-WLASSSADKLIKIWGAYDGKFEKTISGHKLGI 72
K L T G ++ + + ++ +++ + + + D + + K
Sbjct: 193 KDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPH 252
Query: 73 SDVA---------------WSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCC 117
D + + G+D K + + K + L+G
Sbjct: 253 PGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQY---AWKKVAELQGQGGGSLFI 309
Query: 118 NFNPQSNLIV-------SGSFDESVRIWDVRTGKCLKTLPAHSD-------PVSAVH--F 161
+P+S+ + +SV ++D++ + ++ V +
Sbjct: 310 KTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEY 369
Query: 162 NRDGSLIVSSSY-----DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKY 210
N+ G + S + + D + + LK ++ D P + +P GK+
Sbjct: 370 NKRGDEVWFSVWNGKNDSSALVVVDDKTLK-LKAVVKD--PRL----ITPTGKF 416
Score = 45.3 bits (106), Expect = 3e-06
Identities = 29/236 (12%), Positives = 66/236 (27%), Gaps = 34/236 (14%)
Query: 28 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE-----KTISGHKLGISDVAWSSDSR 82
AV + S +G +L D I + + + K + S + R
Sbjct: 62 YAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDR 121
Query: 83 -LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNL-IVSGSFDESVRIWDV 140
+ I + + + + + V ++P+ + + S + I +V
Sbjct: 122 YTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNV 181
Query: 141 R-TGKCL-----------KTLPAHSDPVSAVHFNRDGSL-IVSSSYDGLCRIWDTASGQC 187
+ TGK L T + ++ ++ + +++ + D+ +
Sbjct: 182 KETGKVLLVNYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRL 241
Query: 188 LKT--------------LIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVVT 229
+ PV +G L T + K V
Sbjct: 242 SALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVA 297
Score = 38.8 bits (89), Expect = 4e-04
Identities = 16/123 (13%), Positives = 31/123 (25%), Gaps = 29/123 (23%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLA-------SSSADKLIKIWGAYDGKFEKTISGHK-- 69
L G +K P L + + + ++ + + +
Sbjct: 295 KVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEW 354
Query: 70 -------LGISDVAWSSD-SRLLVSGS------------DDKTLKIWELSSGKCLKTLKG 109
+ ++ + S DDKTLK+ + L T G
Sbjct: 355 ADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVKDPRLITPTG 414
Query: 110 HSN 112
N
Sbjct: 415 KFN 417
Score = 38.4 bits (88), Expect = 5e-04
Identities = 24/239 (10%), Positives = 54/239 (22%), Gaps = 41/239 (17%)
Query: 25 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA--WSSDSR 82
SS + + + + K I + D
Sbjct: 106 EARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRV 165
Query: 83 LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV-- 140
+ S + I + + + + + G +D S R +
Sbjct: 166 AAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAA 225
Query: 141 --------------------------RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 174
G+ + PV + DGS+ + +
Sbjct: 226 NNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDP 285
Query: 175 GLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT-------LDNTLKLWDSK 226
+ L+ F+K P ++ T + ++ ++D K
Sbjct: 286 KNHPQYAWKKVAELQGQ----GGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLK 340
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Paracoccus
denitrificans [TaxId: 266]}
Length = 432
Score = 65.2 bits (158), Expect = 7e-13
Identities = 15/121 (12%), Positives = 34/121 (28%), Gaps = 6/121 (4%)
Query: 118 NFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 177
+++ ++ V+ + + D T + L + G + DG
Sbjct: 27 DWDLENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHI-SRLSASGRYLFVIGRDGKV 85
Query: 178 RIWDTASGQCLKTL-IDDDNPP---VSFVKFSPNGKYILAA-TLDNTLKLWDSKVVTPAI 232
+ D + I + + KY +A + D + + P
Sbjct: 86 NMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKK 145
Query: 233 I 233
I
Sbjct: 146 I 146
Score = 64.8 bits (157), Expect = 8e-13
Identities = 18/159 (11%), Positives = 42/159 (26%), Gaps = 18/159 (11%)
Query: 83 LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 142
V+ D + + + S+ + L V + + D V + D+
Sbjct: 34 FSVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWM 92
Query: 143 GKC-----LKTLPAHSDPVSAVHFNRDGS-LIVSSSYDGLCRIWDTASGQCLKTLID--- 193
+ +K ++ + I + + I D + + K
Sbjct: 93 KEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGM 152
Query: 194 -------DDNPPVSFVKFSPNGKYILAATLD-NTLKLWD 224
P V+ + S + + + L D
Sbjct: 153 TYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVD 191
Score = 60.6 bits (146), Expect = 3e-11
Identities = 23/220 (10%), Positives = 55/220 (25%), Gaps = 20/220 (9%)
Query: 28 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE-----KTISGHKLGISDVAWSSDSR 82
AV + S +G +L D + + + + K S + + + +
Sbjct: 62 YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDK 121
Query: 83 LL-VSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSN------------LIVSG 129
I + + + K ++P+ IV+
Sbjct: 122 YAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNV 181
Query: 130 SFDESVRIWDVRTGKCLKTLPAHSDPV-SAVHFNRDGSLIVSSSYDGLCRIWDTASGQCL 188
+ + D LKT ++ + ++++ + L
Sbjct: 182 KETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKL 241
Query: 189 KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDSKVV 228
+ D N + + T + D V
Sbjct: 242 VAIEDTGGQTPH-PGRGANFVHPTFGPVWATSHMGDDSVA 280
Score = 45.2 bits (106), Expect = 3e-06
Identities = 23/151 (15%), Positives = 42/151 (27%), Gaps = 15/151 (9%)
Query: 65 ISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSN 124
I G D AW G +K S + +
Sbjct: 282 IGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIK 341
Query: 125 LIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY-----DGLCRI 179
+ D + + + V FN+DG+ + S + + +
Sbjct: 342 AMTGDGSDPEFKTLPIAEWA---GITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVV 398
Query: 180 WDTASGQCLKTLIDDDNPPVSFVKFSPNGKY 210
D + + LK +I D+ +P GK+
Sbjct: 399 VDDKTLE-LKHVIKDER------LVTPTGKF 422
Score = 41.3 bits (96), Expect = 7e-05
Identities = 17/112 (15%), Positives = 34/112 (30%), Gaps = 17/112 (15%)
Query: 14 KPNYVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGIS 73
+ TL + SV + + + +D K + I+ + +
Sbjct: 316 SQYLYVDATLNPEAEISGSV-AVFDIKAMTGDGSDPEFKTLPIAEWA---GITEGQPRVV 371
Query: 74 DVAWSSDSRLLVSGS-------------DDKTLKIWELSSGKCLKTLKGHSN 112
++ D + DDKTL++ + + L T G N
Sbjct: 372 QGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLELKHVIKDERLVTPTGKFN 423
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 287
Score = 62.3 bits (149), Expect = 4e-12
Identities = 15/74 (20%), Positives = 29/74 (39%), Gaps = 2/74 (2%)
Query: 68 HKLGISDVAWSSDSRLLVSGSDDKTLKIWELSS-GKCLKTLKGHSNYVFCCNFNPQSNLI 126
+ L+ +GS D + I+ + K +K L H + V + + +
Sbjct: 214 KPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWET-PSTL 272
Query: 127 VSGSFDESVRIWDV 140
VS D ++ W+V
Sbjct: 273 VSSGADACIKRWNV 286
Score = 58.8 bits (140), Expect = 8e-11
Identities = 17/81 (20%), Positives = 32/81 (39%), Gaps = 9/81 (11%)
Query: 100 SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAV 159
+ LKT+ GH+ + NP ++SGS+D + W + HS+ + ++
Sbjct: 2 HDEVLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSSMHQ-----DHSNLIVSL 52
Query: 160 HFNRDGSLIVSSSYDGLCRIW 180
++ S D L
Sbjct: 53 DNSKAQEYSSISWDDTLKVNG 73
Score = 54.2 bits (128), Expect = 3e-09
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 31 SSVKFSPNGEWLASSSADKLIKIWGAYD-GKFEKTISGHKLGISDVAWSSDSRLLVSGSD 89
+ + + +A+ S D I I+ K K ++ HK G++++ W + S LVS
Sbjct: 219 GANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGA 277
Query: 90 DKTLKIW 96
D +K W
Sbjct: 278 DACIKRW 284
Score = 53.0 bits (125), Expect = 6e-09
Identities = 21/93 (22%), Positives = 34/93 (36%), Gaps = 9/93 (9%)
Query: 63 KTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQ 122
KTISGH GI+ + + L+SGS D + W SS + HSN + + +
Sbjct: 7 KTISGHNKGITALTVNP----LISGSYDGRIMEWSSSSM-----HQDHSNLIVSLDNSKA 57
Query: 123 SNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDP 155
D + + A ++
Sbjct: 58 QEYSSISWDDTLKVNGITKHEFGSQPKVASANN 90
Score = 49.6 bits (116), Expect = 9e-08
Identities = 12/115 (10%), Positives = 31/115 (26%), Gaps = 1/115 (0%)
Query: 110 HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIV 169
S L+ E + + A + L+
Sbjct: 172 PSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVA 231
Query: 170 SSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
+ S D I+ + ++ V+ + + ++++ D +K W+
Sbjct: 232 TGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADACIKRWN 285
Score = 49.2 bits (115), Expect = 1e-07
Identities = 24/186 (12%), Positives = 52/186 (27%), Gaps = 20/186 (10%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 81
T++GH K ++++ +P L S S D I W + H I + S
Sbjct: 8 TISGHNKGITALTVNP----LISGSYDGRIMEWSSSSMH-----QDHSNLIVSLDNSKAQ 58
Query: 82 RLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 141
W+ + T + + N V + D+ + +
Sbjct: 59 EYSSI--------SWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFT 110
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 201
+ + + V +++ + + L S+
Sbjct: 111 ---GDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSY 167
Query: 202 VKFSPN 207
+ SP+
Sbjct: 168 ISISPS 173
Score = 48.0 bits (112), Expect = 3e-07
Identities = 15/70 (21%), Positives = 29/70 (41%), Gaps = 10/70 (14%)
Query: 142 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 201
+ LKT+ H+ ++A+ N ++S SYDG W ++S + +
Sbjct: 2 HDEVLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSSMHQDHS------NLIVS 51
Query: 202 VKFSPNGKYI 211
+ S +Y
Sbjct: 52 LDNSKAQEYS 61
Score = 40.7 bits (93), Expect = 8e-05
Identities = 11/33 (33%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 54
L H V+++ + L SS AD IK W
Sbjct: 253 ALNAHKDGVNNLLWETPS-TLVSSGADACIKRW 284
Score = 31.5 bits (69), Expect = 0.089
Identities = 20/206 (9%), Positives = 45/206 (21%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 78
H+ + S+ S E+ + S D L + A
Sbjct: 38 SSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVL 97
Query: 79 SDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 138
++ L+ I + + NYV + + S E
Sbjct: 98 TNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDL 157
Query: 139 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 198
+ + G +++ + A I
Sbjct: 158 KTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAE 217
Query: 199 VSFVKFSPNGKYILAATLDNTLKLWD 224
+ + +LD + ++
Sbjct: 218 KGANEEEIEEDLVATGSLDTNIFIYS 243
Score = 25.7 bits (54), Expect = 6.6
Identities = 6/41 (14%), Positives = 18/41 (43%), Gaps = 5/41 (12%)
Query: 184 SGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
+ LKT+ + ++ + +P +++ + D + W
Sbjct: 2 HDEVLKTISGHNKG-ITALTVNP----LISGSYDGRIMEWS 37
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon
Methanosarcina mazei [TaxId: 2209]}
Length = 301
Score = 58.0 bits (138), Expect = 1e-10
Identities = 15/62 (24%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 127 VSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGS-LIVSSSYDGLCRIWDTASG 185
++ S +++ + DV + K T+P S+P+ + DG+ + V++++ I DTA+
Sbjct: 6 IANSESDNISVIDVTSNKVTATIPVGSNPMG-AVISPDGTKVYVANAHSNDVSIIDTATN 64
Query: 186 QC 187
Sbjct: 65 NV 66
Score = 55.6 bits (132), Expect = 8e-10
Identities = 17/90 (18%), Positives = 34/90 (37%), Gaps = 2/90 (2%)
Query: 109 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGS-L 167
+ + ++ + + +V + D T K +P DP + + DG +
Sbjct: 200 AAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPDP-AGIAVTPDGKKV 258
Query: 168 IVSSSYDGLCRIWDTASGQCLKTLIDDDNP 197
V+ S+ + DTA+ T+ NP
Sbjct: 259 YVALSFCNTVSVIDTATNTITATMAVGKNP 288
Score = 55.3 bits (131), Expect = 1e-09
Identities = 12/71 (16%), Positives = 26/71 (36%), Gaps = 2/71 (2%)
Query: 92 TLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVRTGKCLKTLP 150
T+ + + + K + + P + V+ SF +V + D T T+
Sbjct: 225 TVSMIDTGTNKITARIPVGPD-PAGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATMA 283
Query: 151 AHSDPVSAVHF 161
+P ++ F
Sbjct: 284 VGKNPYASGQF 294
Score = 53.7 bits (127), Expect = 4e-09
Identities = 21/155 (13%), Positives = 53/155 (34%), Gaps = 2/155 (1%)
Query: 44 SSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD-SRLLVSGSDDKTLKIWELSSGK 102
++S I + K TI S D +++ V+ + + I + ++
Sbjct: 7 ANSESDNISVIDVTSNKVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNN 65
Query: 103 CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFN 162
+ T+ S+ + V+ ++ + D + T+ P+
Sbjct: 66 VIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSP 125
Query: 163 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 197
L V+++ D + +T + + T+ +P
Sbjct: 126 DGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSP 160
Score = 51.4 bits (121), Expect = 2e-08
Identities = 27/128 (21%), Positives = 51/128 (39%), Gaps = 4/128 (3%)
Query: 85 VSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVRTG 143
++ S+ + + +++S K T+ SN +P + V+ + V I D T
Sbjct: 6 IANSESDNISVIDVTSNKVTATIPVGSN-PMGAVISPDGTKVYVANAHSNDVSIIDTATN 64
Query: 144 KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK 203
+ T+PA S P + V++ + DT S T+ +P +
Sbjct: 65 NVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPL--GLA 122
Query: 204 FSPNGKYI 211
SP+GK +
Sbjct: 123 LSPDGKKL 130
Score = 48.3 bits (113), Expect = 2e-07
Identities = 8/56 (14%), Positives = 20/56 (35%), Gaps = 2/56 (3%)
Query: 54 WGAYDGKFEKTISGHKLGISDVAWSSD-SRLLVSGSDDKTLKIWELSSGKCLKTLK 108
K I + +A + D ++ V+ S T+ + + ++ T+
Sbjct: 229 IDTGTNKITARIPVGP-DPAGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATMA 283
Score = 47.6 bits (111), Expect = 4e-07
Identities = 12/57 (21%), Positives = 22/57 (38%), Gaps = 3/57 (5%)
Query: 169 VSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAA-TLDNTLKLWD 224
+++S + D S + T+ NP SP+G + A N + + D
Sbjct: 6 IANSESDNISVIDVTSNKVTATIPVGSNP--MGAVISPDGTKVYVANAHSNDVSIID 60
Score = 37.2 bits (84), Expect = 0.001
Identities = 29/243 (11%), Positives = 67/243 (27%), Gaps = 48/243 (19%)
Query: 28 KAVSSVKFSPNGEWL-ASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVS 86
SP+G + +++ + I T+ ++ V+
Sbjct: 32 SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVT 91
Query: 87 GSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCL 146
TL + + +S T+K + + L V+ + D++V + + T +
Sbjct: 92 NMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVI 151
Query: 147 KTLPAHSDPVSAV--------------------------------------------HFN 162
T+ P
Sbjct: 152 NTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEG 211
Query: 163 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAA-TLDNTLK 221
+ Y + DT + + + +P + + +P+GK + A + NT+
Sbjct: 212 TKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPDP--AGIAVTPDGKKVYVALSFCNTVS 269
Query: 222 LWD 224
+ D
Sbjct: 270 VID 272
Score = 34.1 bits (76), Expect = 0.011
Identities = 4/46 (8%), Positives = 16/46 (34%), Gaps = 2/46 (4%)
Query: 22 TLAGHTKAVSSVKFSPNGEWL-ASSSADKLIKIWGAYDGKFEKTIS 66
+ + + +P+G+ + + S + + T++
Sbjct: 239 RIPVG-PDPAGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATMA 283
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli
[TaxId: 562]}
Length = 333
Score = 49.4 bits (116), Expect = 1e-07
Identities = 15/109 (13%), Positives = 33/109 (30%), Gaps = 6/109 (5%)
Query: 78 SSDSRLLVSGSDDKTLKIWELSSGKCLKTLK--GHSNYVFCCNFNPQSN-LIVSGSFDES 134
S + ++ + + + +W L+ L + V +P L V +
Sbjct: 1 SLKQTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFR 60
Query: 135 VRIWDVRTGKCLKTLPAHSDPVSA---VHFNRDGSLIVSSSYDGLCRIW 180
V + + T A S + + + G + SY+
Sbjct: 61 VLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSV 109
Score = 36.0 bits (81), Expect = 0.003
Identities = 9/60 (15%), Positives = 21/60 (35%), Gaps = 2/60 (3%)
Query: 167 LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP-VSFVKFSPNGKYILAATL-DNTLKLWD 224
+ ++S +W+ L D P V + SP+ +Y+ + + +
Sbjct: 6 VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYR 65
Score = 30.2 bits (66), Expect = 0.22
Identities = 11/120 (9%), Positives = 31/120 (25%), Gaps = 18/120 (15%)
Query: 63 KTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHS---NYVFCCNF 119
+ S + L + ++ +S + + +G N
Sbjct: 224 ENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNV 283
Query: 120 NPQSN-LIVSGSFDESVRIW--DVRTGKC--LKTLPAHSDPVSAVHFNRDGSLIVSSSYD 174
+ LI +G + ++ G P+ +V ++++
Sbjct: 284 DHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVGQGPMW----------VVVNAHE 333
Score = 27.9 bits (60), Expect = 1.3
Identities = 9/81 (11%), Positives = 21/81 (25%), Gaps = 3/81 (3%)
Query: 33 VKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGIS--DVAWSSD-SRLLVSGSD 89
+ + +A + + DG L+ +G
Sbjct: 237 ITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQK 296
Query: 90 DKTLKIWELSSGKCLKTLKGH 110
+ ++E+ + L KG
Sbjct: 297 SHHISVYEIVGEQGLLHEKGR 317
Score = 27.5 bits (59), Expect = 1.8
Identities = 13/119 (10%), Positives = 31/119 (26%), Gaps = 5/119 (4%)
Query: 110 HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIV 169
+ Y +C N S + + L
Sbjct: 187 NEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYA 246
Query: 170 SSSYDGLCRIWDTASGQCLKTLID---DDNPPVSFVKFSPNGKYILAA-TLDNTLKLWD 224
L ++ + + + + P F +GKY++AA + + +++
Sbjct: 247 CDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFN-VDHSGKYLIAAGQKSHHISVYE 304
>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal
domain {Pseudomonas nautica [TaxId: 2743]}
Length = 441
Score = 49.1 bits (117), Expect = 2e-07
Identities = 21/212 (9%), Positives = 53/212 (25%), Gaps = 32/212 (15%)
Query: 30 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSD 89
+ + G++ S+ + + A + ++ A G D
Sbjct: 178 LDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAAVKAGNFKTIG-D 236
Query: 90 DKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVRTGKCLKT 148
K + + + + N +P I +G +V + + K
Sbjct: 237 SKVPVVDGRGESEFTRYIPVP-KNPHGLNTSPDGKYFIANGKLSPTVSVIAID--KLDDL 293
Query: 149 LPAHSDPVSAVH-------------FNRDGSLIVSSSYDGLCRIWD---------TASGQ 186
+ + F+ G+ + D W+
Sbjct: 294 FEDKIELRDTIVAEPELGLGPLHTTFDGRGNAYTTLFIDSQVCKWNIADAIKHYNGDRVN 353
Query: 187 CLKTLIDDDNPP-----VSFVKFSPNGKYILA 213
++ +D P +GK+++
Sbjct: 354 YIRQKLDVQYQPGHNHASLTESRDADGKWLVV 385
Score = 48.0 bits (114), Expect = 4e-07
Identities = 21/149 (14%), Positives = 40/149 (26%), Gaps = 15/149 (10%)
Query: 83 LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 142
SG +++ + S + L + VF N S G +ES I
Sbjct: 13 GFWSGGHQGEVRVLGVPSMRELMRI-----PVF----NVDSAT-GWGITNESKEILG--G 60
Query: 143 GKCLKTLPAHSDPVSAVHFNRDGS-LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 201
+ H +S DG L ++ + + K + +
Sbjct: 61 DQQYLNGDCHHPHISMTDGRYDGKYLFINDKANTRVARIRLDIMKTDKITHIPNVQAIHG 120
Query: 202 VKFSPNGK--YILAATLDNTLKLWDSKVV 228
++ K Y+ + D
Sbjct: 121 LRLQKVPKTNYVFCNAEFVIPQPNDGTDF 149
Score = 45.7 bits (108), Expect = 2e-06
Identities = 22/221 (9%), Positives = 50/221 (22%), Gaps = 13/221 (5%)
Query: 12 NPKPNYVLKFTLAGHTKAVSS-----VKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS 66
N + + L+ T V + +G + ++ + A +
Sbjct: 114 NVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAETMDVAWQVI 173
Query: 67 GHKLGISDVAWSSDSRLLVSGS-DDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNL 125
+ + + S + + + + N N
Sbjct: 174 VDG-NLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVF-NVERIAAAVKAGNF 231
Query: 126 IVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 185
G V + + + +P +P I + +
Sbjct: 232 KTIGDSKVPV-VDGRGESEFTRYIPVPKNPHGLNTSPDGKYFIANGKLSPTVSVIAIDK- 289
Query: 186 QCLKTLIDDDNPPVSFVKFSPN-GKYILAATLDNTLKLWDS 225
L L +D + P G L T D + +
Sbjct: 290 --LDDLFEDKIELRDTIVAEPELGLGPLHTTFDGRGNAYTT 328
Score = 45.3 bits (107), Expect = 3e-06
Identities = 19/112 (16%), Positives = 34/112 (30%), Gaps = 14/112 (12%)
Query: 127 VSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 186
SG VR+ V + + L +P FN D + + + I
Sbjct: 15 WSGGHQGEVRVLGVPSMRELMRIPV---------FNVDSATGWGITNESK-EILGGDQQ- 63
Query: 187 CLKTLIDDDNPPVSFVKFSPNGKYILAA-TLDNTLKLWDSKVVTPAIICSTP 237
D +P +S +GKY+ + + ++ I P
Sbjct: 64 --YLNGDCHHPHISMTDGRYDGKYLFINDKANTRVARIRLDIMKTDKITHIP 113
Score = 29.9 bits (67), Expect = 0.25
Identities = 10/47 (21%), Positives = 20/47 (42%), Gaps = 4/47 (8%)
Query: 2 NLSNAPSSSSNPKPNYVLK----FTLAGHTKAVSSVKFSPNGEWLAS 44
N+++A + + NY+ + GH A + +G+WL
Sbjct: 339 NIADAIKHYNGDRVNYIRQKLDVQYQPGHNHASLTESRDADGKWLVV 385
>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain
{Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Length = 281
Score = 42.4 bits (98), Expect = 2e-05
Identities = 19/227 (8%), Positives = 64/227 (28%), Gaps = 28/227 (12%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSS------ADKLIKIWGAYDGKFEK------TISGHKL 70
+ + +++ +F P+G +A + + +G+ ++ +G ++
Sbjct: 36 IVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKRITYFSGKSTGRRM 95
Query: 71 GISDVAWSSDSRLLVS---GSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 127
+ D L++S ++ + + + F +I
Sbjct: 96 FTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIG 155
Query: 128 SGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD------ 181
+F+ + + +S + + I D
Sbjct: 156 RNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGHRIYFITDIDGFGQ 215
Query: 182 ----TASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 224
G+ L+ + + +G+ I + ++ +++
Sbjct: 216 IYSTDLDGKDLRKHTSFTDYYPRH--LNTDGRRI-LFSKGGSIYIFN 259
Score = 31.7 bits (70), Expect = 0.065
Identities = 20/168 (11%), Positives = 50/168 (29%), Gaps = 19/168 (11%)
Query: 36 SPNGEWLASSSADKLIKIWGA-YDGKFEKTISGHKLGISDVAWSSDSRLLVSGS------ 88
+G+ + D +W + I + I++ + D R +
Sbjct: 9 DIHGDRIIFVCCDD---LWEHDLKSGSTRKIVSNLGVINNARFFPDGRKIAIRVMRGSSL 65
Query: 89 DDKTLKIWELSSGKCLK------TLKGHSNYVFCCNFNPQSNLIVSGSFDESV---RIWD 139
+ L + +G+ + G + F+P NLI+S +
Sbjct: 66 NTADLYFYNGENGEIKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLY 125
Query: 140 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC 187
+ +P + P + + F +I ++++ +
Sbjct: 126 RVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGYRGGTRG 173
>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26,
N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Length = 470
Score = 39.3 bits (90), Expect = 2e-04
Identities = 24/213 (11%), Positives = 50/213 (23%), Gaps = 14/213 (6%)
Query: 10 SSNPKPNYVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK 69
+ NP + + T + + ++ + W + + + +
Sbjct: 223 AVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQ 282
Query: 70 LGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 129
D L + + + S +
Sbjct: 283 NYSVMDICDYDES----SGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIIS 338
Query: 130 SFDESVRIWDVRTGKCLKTLPAHSDP--VSAVHFNRDGSLIVSSSYDG------LCRI-- 179
+ + I + K T + D +S+ Y G L +I
Sbjct: 339 NEEGYRHICYFQIDKKDCTFITKGTWEVIGIEALTSDYLYYISNEYKGMPGGRNLYKIQL 398
Query: 180 WDTASGQCLKTLIDDDNPPVSFVKFSPNGKYIL 212
D CL ++ + V FS KY
Sbjct: 399 SDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQ 431
Score = 32.4 bits (72), Expect = 0.041
Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 14/141 (9%)
Query: 23 LAGHTKAVSSVKFSPNGEWLASSSAD--KLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 80
+ + N + S+ + + I + G I A +SD
Sbjct: 316 VGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFITKGTWEVIGIEALTSD 375
Query: 81 SRLLVSGSDDKT--------LKIWELSSGKCL-KTLKGHSNYVFCCNFNPQSNLIV---S 128
+S +++ + + CL L + +F+ ++ S
Sbjct: 376 YLYYISNEYKGMPGGRNLYKIQLSDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCS 435
Query: 129 GSFDESVRIWDVRTGKCLKTL 149
G + K L+ L
Sbjct: 436 GPGLPLYTLHSSVNDKGLRVL 456
Score = 31.6 bits (70), Expect = 0.095
Identities = 21/221 (9%), Positives = 50/221 (22%), Gaps = 21/221 (9%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGA------YDGKFEK--TISGHKLGIS 73
T +++ SP+G+++ YD + T
Sbjct: 56 TFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQ 115
Query: 74 DVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVF-----------CCNFNPQ 122
V WS L ++ E + T G + ++ +
Sbjct: 116 WVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSA 175
Query: 123 SNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 182
+G+F + D + + + + + +T
Sbjct: 176 LWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNT 235
Query: 183 ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 223
S + + Y+ T ++
Sbjct: 236 DSLSSVTNATSIQITAPA--SMLIGDHYLCDVTWATQERIS 274
Score = 29.7 bits (65), Expect = 0.37
Identities = 7/49 (14%), Positives = 19/49 (38%), Gaps = 3/49 (6%)
Query: 63 KTISGHKLGISDVAWSSDSRLLV---SGSDDKTLKIWELSSGKCLKTLK 108
++ + V++S +++ SG + + K L+ L+
Sbjct: 409 CELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRVLE 457
Score = 27.4 bits (59), Expect = 2.1
Identities = 11/54 (20%), Positives = 22/54 (40%), Gaps = 6/54 (11%)
Query: 174 DGLCRIWDTASGQCLKTL----IDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 223
+ +++ G L D+ ++ SP+G++IL N +K W
Sbjct: 35 ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEY--NYVKQW 86
Score = 26.2 bits (56), Expect = 4.8
Identities = 9/50 (18%), Positives = 16/50 (32%), Gaps = 3/50 (6%)
Query: 19 LKFTLAGHTKAVSSVKFSPNGEWLA---SSSADKLIKIWGAYDGKFEKTI 65
L L SV FS ++ S L + + + K + +
Sbjct: 407 LSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRVL 456
>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue
{Nostoc punctiforme [TaxId: 272131]}
Length = 302
Score = 39.3 bits (90), Expect = 2e-04
Identities = 15/134 (11%), Positives = 40/134 (29%), Gaps = 5/134 (3%)
Query: 72 ISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 131
+ ++A + D + V+ + I ++ + V F +L+ +G
Sbjct: 30 LENLASAPDGTIFVTNHEVGE--IVSITPDGNQQIHATVEGKVSGLAFTSNGDLVATGWN 87
Query: 132 DESVRIWDVR---TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCL 188
+S+ + + + ++ + D + + SY G + D
Sbjct: 88 ADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGS 147
Query: 189 KTLIDDDNPPVSFV 202
L +
Sbjct: 148 IWLEHPMLARSNSE 161
Score = 36.2 bits (82), Expect = 0.002
Identities = 22/208 (10%), Positives = 62/208 (29%), Gaps = 15/208 (7%)
Query: 30 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSD 89
+ ++ +P+G ++ I DG + + + +S +A++S+ L+ +G +
Sbjct: 30 LENLASAPDGTIFVTNHEVGEIVSITP-DGNQQ-IHATVEGKVSGLAFTSNGDLVATGWN 87
Query: 90 DKTLKIWELS---SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCL 146
++ + L + ++ + + + S+ ++ + DV
Sbjct: 88 ADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGS 147
Query: 147 KTLPAHSDPVSAVHFNRDGSLIVSSSYDGL-------CRIWDTASGQCLKTLIDDDNPPV 199
L S + + + L + K +
Sbjct: 148 IWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQ 207
Query: 200 SF---VKFSPNGKYILAATLDNTLKLWD 224
+ F G A + N++
Sbjct: 208 TNIDDFAFDVEGNLYGATHIYNSVVRIA 235
>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia
coli [TaxId: 562]}
Length = 269
Score = 37.1 bits (84), Expect = 0.001
Identities = 12/61 (19%), Positives = 24/61 (39%), Gaps = 4/61 (6%)
Query: 21 FTLAGHTKAVSSVKFSPNGEWLASSSAD---KLIKIWGAYDGKFEKTISGHKLGISDVAW 77
+ T + +PNG + SS+ ++ + DG+F+ + + AW
Sbjct: 207 VQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVST-DGRFKARLPATDGQVKFPAW 265
Query: 78 S 78
S
Sbjct: 266 S 266
Score = 37.1 bits (84), Expect = 0.001
Identities = 25/213 (11%), Positives = 60/213 (28%), Gaps = 11/213 (5%)
Query: 22 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF--EKTISGHKLGISDVAWSS 79
+ + + S +SP+G LA + + + ++ A+S
Sbjct: 33 VVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSP 92
Query: 80 DSRLLV-----SGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 134
D L +GS + + + + + ++ + +
Sbjct: 93 DGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQ 152
Query: 135 VRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD 194
V ++ G + S A + +++ SS G I ++
Sbjct: 153 VYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVL-S 211
Query: 195 DNPPVSFVKFSPNGKYILAATLDNT---LKLWD 224
+PNG ++ ++ L L
Sbjct: 212 STFLDETPSLAPNGTMVIYSSSQGMGSVLNLVS 244
Score = 25.2 bits (53), Expect = 9.1
Identities = 18/131 (13%), Positives = 31/131 (23%), Gaps = 8/131 (6%)
Query: 57 YDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFC 116
YDG + + + AWS D L + + + V
Sbjct: 26 YDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSAL--------VIQTLANGAVRQ 77
Query: 117 CNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGL 176
P+ N + S D S + + L S ++
Sbjct: 78 VASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPD 137
Query: 177 CRIWDTASGQC 187
+ S Q
Sbjct: 138 SQNLAFTSDQA 148
>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 279
Score = 34.2 bits (77), Expect = 0.010
Identities = 13/74 (17%), Positives = 32/74 (43%), Gaps = 5/74 (6%)
Query: 110 HSNYVFCCNFNPQSNLIVSGSF-DESVRIWDVRTGKCLKTLPAHSDP--VSAVHFNRDGS 166
+NY N ++++ + + ++ I+ + G+ + L + V DGS
Sbjct: 198 ITNYPIGVGINSNGEILIADNHNNFNLTIFT-QDGQLISALESKVKHAQCFDVALMDDGS 256
Query: 167 LIVSSSYDGLCRIW 180
+++ +S D I+
Sbjct: 257 VVL-ASKDYRLYIY 269
Score = 25.4 bits (54), Expect = 7.6
Identities = 9/66 (13%), Positives = 27/66 (40%), Gaps = 9/66 (13%)
Query: 54 WGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNY 113
+G +G+F S VA ++ + ++V+ +++ ++I++ G+
Sbjct: 15 FGVMEGQFT--------EPSGVAVNAQNDIIVADTNNHRIQIFDK-EGRFKFQFGECGKR 65
Query: 114 VFCCNF 119
+
Sbjct: 66 DSQLLY 71
>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein
6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId:
9606]}
Length = 465
Score = 33.4 bits (75), Expect = 0.020
Identities = 15/107 (14%), Positives = 30/107 (28%), Gaps = 13/107 (12%)
Query: 132 DESVRIWDVRTGKCLKTLPAHSD---PVSAVHFNRDGSLIVSS---------SYDGLCRI 179
+VR+W+V T + + D + S SY G +
Sbjct: 36 KGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVL 95
Query: 180 WDTASGQCLK-TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDS 225
G + N + + + P G+ ++ +N
Sbjct: 96 SKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFENNIYYCAHV 142
Score = 29.9 bits (66), Expect = 0.25
Identities = 12/63 (19%), Positives = 24/63 (38%), Gaps = 7/63 (11%)
Query: 164 DGSLIVSSSYDGLCRIWDTASGQCLKTLID---DDNPPVSFVKFSPNGKYILAATLDNTL 220
D I G R+W+ + LI+ ++ + SP+ +Y L + N
Sbjct: 27 DTEFIYREQ-KGTVRLWNVETNT-STVLIEGKKIESLRAIRYEISPDREYALFSY--NVE 82
Query: 221 KLW 223
++
Sbjct: 83 PIY 85
Score = 27.2 bits (59), Expect = 1.8
Identities = 6/66 (9%), Positives = 19/66 (28%), Gaps = 3/66 (4%)
Query: 134 SVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIV---SSSYDGLCRIWDTASGQCLKT 190
S +CL + + F+ + + + +T + +
Sbjct: 390 SANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKCEGPGVPMVTVHNTTDKKKMFD 449
Query: 191 LIDDDN 196
L +++
Sbjct: 450 LETNEH 455
Score = 26.9 bits (58), Expect = 2.5
Identities = 25/170 (14%), Positives = 49/170 (28%), Gaps = 30/170 (17%)
Query: 72 ISDVAWSSDSRLLVS----GSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 127
I+ V W++ +++ V+ + L + + ++G C K + S
Sbjct: 257 ITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKD 316
Query: 128 SGSFDESVRIWDVRTGKCLKTLPAHSDP-----------------VSAVHFNRDGSLIV- 169
F I GK + S P + ++ G+ I
Sbjct: 317 GRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYF 376
Query: 170 -----SSSYDGLCRI--WDTASGQCLKTLIDDDNPPVSFVKFSPNGKYIL 212
L + QCL + ++ S FS + + L
Sbjct: 377 LSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFS-ASFSHSMDFFL 425
>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus
[TaxId: 1280]}
Length = 319
Score = 32.0 bits (71), Expect = 0.062
Identities = 15/99 (15%), Positives = 36/99 (36%), Gaps = 6/99 (6%)
Query: 125 LIVSGSFDESVRIWD-----VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 179
L SG + +V I T + + + ++F+R G L + ++G
Sbjct: 6 LFYSGKSNSAVPIISESELQTITAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFK 65
Query: 180 WDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN 218
+ + + + + P + +K +G+ + D
Sbjct: 66 INPETKEIKRPFVSHKANPAA-IKIHKDGRLFVCYLGDF 103
>d1c8ua2 d.38.1.3 (A:116-286) Thioesterase II (TesB) {Escherichia
coli [TaxId: 562]}
Length = 171
Score = 29.4 bits (65), Expect = 0.24
Identities = 11/61 (18%), Positives = 21/61 (34%), Gaps = 9/61 (14%)
Query: 130 SFDESVRIWDVRTGKCLKTLPAHSDPVSAVH---------FNRDGSLIVSSSYDGLCRIW 180
+W R + L + SA + +DG L+ S+ +G+ R
Sbjct: 111 IATIDHSMWFHRPFNLNEWLLYSVESTSASSARGFVRGEFYTQDGVLVASTVQEGVMRNH 170
Query: 181 D 181
+
Sbjct: 171 N 171
>d1l1oc_ b.40.4.3 (C:) Replication protein A 70 KDa subunit (RPA70)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 178
Score = 29.5 bits (66), Expect = 0.25
Identities = 10/58 (17%), Positives = 21/58 (36%)
Query: 8 SSSSNPKPNYVLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI 65
+ N K +L +A + F + E + +A L ++ + FE+
Sbjct: 67 TEFPNFKYRMILSVNIADFQENQWVTCFQESAEAILGQNAAYLGELKDKNEQAFEEVF 124
>d1sr4a_ b.42.2.1 (A:) Cytolethal distending toxin subunit A
{Haemophilus ducreyi [TaxId: 730]}
Length = 167
Score = 28.9 bits (64), Expect = 0.35
Identities = 17/111 (15%), Positives = 36/111 (32%), Gaps = 13/111 (11%)
Query: 83 LLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 142
+ + G + L +W L+ L + N N ++ + G E R +
Sbjct: 22 MTLMGQNGALLTVWALAKRN---WLWAYPNIYSQDFGNIRNWKMEPGKHREYFRFVNQSL 78
Query: 143 GKCLKTLPAHSDPVSAVHFNRDGSL-----IVSSSYDGLCRIWDTASGQCL 188
G C++ + +H + + G I + G+C+
Sbjct: 79 GTCVE-----AYGNGLIHDICSLDKLAQEFELLPTDSGAVVIKSVSQGRCV 124
>d1zsoa1 b.166.1.1 (A:1-156) Hypothetical protein MAL13P1.257
{Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
Length = 156
Score = 27.4 bits (61), Expect = 1.1
Identities = 8/52 (15%), Positives = 20/52 (38%), Gaps = 12/52 (23%)
Query: 33 VKFSPNGEWLASSSADKLI-------KIWGAYDGKFEKTISGHKLGISDVAW 77
+ F P+ ++ + KL + W Y+ + +GI ++ +
Sbjct: 107 IDFFPSNNFIVEDTKGKLYYDVNLSDQNWCDYNEE-----HEMCVGIYNLEY 153
>d3c9fa2 d.159.1.2 (A:16-337) 5'-nucleotidase (syn. UDP-sugar
hydrolase), N-terminal domain {Candida albicans [TaxId:
5476]}
Length = 322
Score = 27.8 bits (61), Expect = 1.2
Identities = 21/86 (24%), Positives = 33/86 (38%), Gaps = 3/86 (3%)
Query: 109 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLI 168
GHS+ F+ S + SG + E+V V K LP D +
Sbjct: 233 GHSHIRDFTVFDSLSTGLQSGRYCETVGWTSVNLDKADLNLPVR---QRFSRSYIDFNTD 289
Query: 169 VSSSYDGLCRIWDTASGQCLKTLIDD 194
+ L + +DTA G+ + LI +
Sbjct: 290 SFKYHTNLDKEFDTAKGKLVSKLIRE 315
>d1umga_ d.280.1.1 (A:) ST0318 {Archaeon Sulfolobus tokodaii [TaxId:
111955]}
Length = 362
Score = 27.0 bits (60), Expect = 2.1
Identities = 10/43 (23%), Positives = 16/43 (37%)
Query: 18 VLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK 60
+L + V + + A S ++L I G Y GK
Sbjct: 188 LLALIGTPARYVIRRVYRNEDNLLAAVVSIERLNLIAGKYVGK 230
>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 260
Score = 26.0 bits (55), Expect = 4.6
Identities = 11/107 (10%), Positives = 30/107 (28%)
Query: 76 AWSSDSRLLVSGSDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 135
A + + V+ +D+ + E S + + + + V+ V
Sbjct: 146 AVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQV 205
Query: 136 RIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 182
+ + AV + D ++ V+ + +
Sbjct: 206 VKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTS 252
>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa
[TaxId: 287]}
Length = 582
Score = 26.1 bits (56), Expect = 5.0
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 123 SNLIVSGSFDESVRIWDVRTGKCL 146
NL+ +G+ D + +D ++GK L
Sbjct: 497 GNLVFTGTGDGYFKAFDAKSGKEL 520
>d1vcla1 b.42.2.1 (A:1-150) Hemolytic lectin CEL-III, domains 1 and
2 {Cucumaria echinata [TaxId: 40245]}
Length = 150
Score = 25.2 bits (54), Expect = 6.1
Identities = 14/104 (13%), Positives = 31/104 (29%), Gaps = 8/104 (7%)
Query: 43 ASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKIWELSSGK 102
+ I + ++ I I + A + GS + +
Sbjct: 25 VGNQGSGNIATYDCDGLSDQQIIICGDGTIRNEARNYC--FTPDGSGNANVMSS-----P 77
Query: 103 CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCL 146
C + S+ + ++ G + I ++ +GKCL
Sbjct: 78 CTLYPEIPSSQRWRQG-RRKTFTDNGGIEQVATEIINLASGKCL 120
>d1smba_ d.111.1.1 (A:) Golgi-associated PR-1 protein {Human (Homo
sapiens) [TaxId: 9606]}
Length = 149
Score = 24.5 bits (52), Expect = 9.1
Identities = 6/24 (25%), Positives = 12/24 (50%)
Query: 112 NYVFCCNFNPQSNLIVSGSFDESV 135
+ + P N++ G F+E+V
Sbjct: 123 SSFVVARYFPAGNVVNEGFFEENV 146
>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing
enzyme {Neurospora crassa [TaxId: 5141]}
Length = 365
Score = 25.2 bits (54), Expect = 9.2
Identities = 9/27 (33%), Positives = 12/27 (44%), Gaps = 1/27 (3%)
Query: 189 KTLIDDDNPPVSFVKFSPNGKYILAAT 215
+T I D P S++ F K I A
Sbjct: 33 RTEIPQDEPI-SWMTFDHERKNIYGAA 58
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.316 0.132 0.410
Gapped
Lambda K H
0.267 0.0510 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 924,390
Number of extensions: 40702
Number of successful extensions: 575
Number of sequences better than 10.0: 1
Number of HSP's gapped: 298
Number of HSP's successfully gapped: 205
Length of query: 247
Length of database: 2,407,596
Length adjustment: 83
Effective length of query: 164
Effective length of database: 1,268,006
Effective search space: 207952984
Effective search space used: 207952984
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 52 (24.3 bits)