Query psy4394
Match_columns 286
No_of_seqs 329 out of 2410
Neff 10.5
Searched_HMMs 46136
Date Sat Aug 17 00:25:43 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4394.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/4394hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1552|consensus 100.0 1.8E-35 3.8E-40 229.8 19.7 231 14-286 1-231 (258)
2 PRK13604 luxD acyl transferase 100.0 1.9E-28 4.2E-33 199.5 17.2 210 67-286 10-242 (307)
3 KOG4391|consensus 100.0 1.7E-28 3.7E-33 184.4 12.1 205 65-285 53-260 (300)
4 PLN02298 hydrolase, alpha/beta 99.9 4.3E-26 9.4E-31 193.6 18.1 215 66-286 32-291 (330)
5 KOG1455|consensus 99.9 4E-26 8.7E-31 181.1 15.1 215 65-285 26-285 (313)
6 PHA02857 monoglyceride lipase; 99.9 1.5E-25 3.3E-30 185.6 18.7 207 72-286 6-248 (276)
7 PLN02385 hydrolase; alpha/beta 99.9 5.6E-25 1.2E-29 188.0 20.2 215 66-286 61-319 (349)
8 COG1506 DAP2 Dipeptidyl aminop 99.9 3.1E-25 6.8E-30 201.5 13.1 221 60-286 359-593 (620)
9 PRK10749 lysophospholipase L2; 99.9 1.5E-23 3.3E-28 177.7 18.5 212 66-286 30-304 (330)
10 PRK05077 frsA fermentation/res 99.9 2E-23 4.4E-28 180.8 19.4 212 65-285 167-392 (414)
11 COG2267 PldB Lysophospholipase 99.9 2.7E-23 5.9E-28 172.2 18.3 211 67-285 10-268 (298)
12 PLN02652 hydrolase; alpha/beta 99.9 1.6E-22 3.4E-27 174.0 21.3 213 66-286 110-364 (395)
13 PRK10566 esterase; Provisional 99.9 3.6E-22 7.9E-27 162.9 14.4 186 89-286 25-230 (249)
14 TIGR03611 RutD pyrimidine util 99.9 2.8E-22 6E-27 163.7 13.4 192 81-286 3-236 (257)
15 COG1647 Esterase/lipase [Gener 99.9 1.4E-22 3E-27 153.5 8.8 184 92-286 16-221 (243)
16 TIGR02240 PHA_depoly_arom poly 99.9 3.2E-21 6.9E-26 159.7 17.8 196 74-284 9-243 (276)
17 TIGR03056 bchO_mg_che_rel puta 99.9 4.7E-21 1E-25 158.6 18.3 202 73-286 12-258 (278)
18 PLN02824 hydrolase, alpha/beta 99.9 1.1E-21 2.5E-26 163.9 14.4 196 74-286 15-272 (294)
19 PF12695 Abhydrolase_5: Alpha/ 99.9 8.4E-22 1.8E-26 147.2 12.0 142 93-286 1-143 (145)
20 PRK00870 haloalkane dehalogena 99.9 5.2E-21 1.1E-25 160.5 16.4 199 75-286 30-279 (302)
21 TIGR03343 biphenyl_bphD 2-hydr 99.9 9.2E-21 2E-25 157.4 17.5 184 90-286 29-261 (282)
22 PRK10115 protease 2; Provision 99.9 6.2E-21 1.3E-25 174.6 17.8 215 65-286 415-651 (686)
23 TIGR01607 PST-A Plasmodium sub 99.9 1.9E-20 4.1E-25 158.5 17.1 208 71-286 2-310 (332)
24 PRK10673 acyl-CoA esterase; Pr 99.9 9.3E-21 2E-25 155.0 13.4 184 89-286 14-233 (255)
25 PF05448 AXE1: Acetyl xylan es 99.9 1.4E-21 3E-26 163.0 8.0 215 65-286 55-301 (320)
26 PLN02511 hydrolase 99.9 5E-20 1.1E-24 159.0 17.8 212 66-286 71-337 (388)
27 PLN03087 BODYGUARD 1 domain co 99.9 2.5E-20 5.4E-25 162.6 15.9 206 73-286 182-456 (481)
28 PRK10985 putative hydrolase; P 99.8 1.3E-20 2.7E-25 159.4 13.3 209 69-286 34-293 (324)
29 PLN02965 Probable pheophorbida 99.8 4.2E-20 9E-25 151.3 15.8 183 92-286 4-231 (255)
30 PRK03204 haloalkane dehalogena 99.8 2E-19 4.4E-24 149.5 19.3 121 66-200 14-136 (286)
31 PRK10349 carboxylesterase BioH 99.8 1.2E-20 2.7E-25 154.5 11.2 180 91-286 13-234 (256)
32 COG3458 Acetyl esterase (deace 99.8 7.1E-21 1.5E-25 148.3 9.1 210 66-283 56-295 (321)
33 TIGR02427 protocat_pcaD 3-oxoa 99.8 1.6E-20 3.4E-25 152.4 11.7 183 90-286 12-231 (251)
34 PRK03592 haloalkane dehalogena 99.8 1.6E-19 3.4E-24 151.0 18.0 110 73-199 13-127 (295)
35 PLN02679 hydrolase, alpha/beta 99.8 4.6E-20 1E-24 158.1 14.4 113 75-200 69-191 (360)
36 PRK06489 hypothetical protein; 99.8 4E-20 8.7E-25 158.6 13.2 202 74-285 47-331 (360)
37 TIGR01250 pro_imino_pep_2 prol 99.8 2.7E-19 5.8E-24 148.3 17.1 204 73-286 8-268 (288)
38 PLN02578 hydrolase 99.8 3.2E-19 7E-24 152.7 17.5 109 74-199 73-186 (354)
39 KOG4409|consensus 99.8 2.5E-19 5.4E-24 145.3 14.3 121 71-200 70-195 (365)
40 PLN02211 methyl indole-3-aceta 99.8 5.9E-19 1.3E-23 145.6 16.9 197 75-283 5-246 (273)
41 TIGR01249 pro_imino_pep_1 prol 99.8 5.5E-19 1.2E-23 148.4 16.5 121 69-200 7-130 (306)
42 PF00326 Peptidase_S9: Prolyl 99.8 9.2E-21 2E-25 150.9 5.4 165 109-286 5-186 (213)
43 TIGR03100 hydr1_PEP hydrolase, 99.8 2E-19 4.3E-24 148.5 13.2 124 69-201 5-135 (274)
44 TIGR01738 bioH putative pimelo 99.8 4.3E-19 9.2E-24 143.5 14.2 180 91-286 4-226 (245)
45 TIGR01840 esterase_phb esteras 99.8 3.6E-19 7.8E-24 141.5 13.3 179 82-275 2-196 (212)
46 PF12697 Abhydrolase_6: Alpha/ 99.8 1.3E-20 2.8E-25 150.4 4.8 182 94-286 1-214 (228)
47 PRK07581 hypothetical protein; 99.8 3.8E-19 8.2E-24 151.6 13.9 118 75-200 24-159 (339)
48 PLN02894 hydrolase, alpha/beta 99.8 2.2E-18 4.9E-23 149.3 18.7 119 70-199 83-210 (402)
49 KOG4178|consensus 99.8 3.4E-18 7.5E-23 138.2 18.3 118 66-198 22-146 (322)
50 KOG1454|consensus 99.8 2E-18 4.3E-23 144.7 16.8 190 89-286 56-302 (326)
51 PRK11460 putative hydrolase; P 99.8 1.3E-18 2.9E-23 139.8 15.0 162 87-286 12-190 (232)
52 TIGR03695 menH_SHCHC 2-succiny 99.8 1.3E-18 2.9E-23 140.8 14.7 102 91-201 1-106 (251)
53 PF06500 DUF1100: Alpha/beta h 99.8 2.1E-18 4.6E-23 145.1 13.6 208 63-283 162-387 (411)
54 PRK11071 esterase YqiA; Provis 99.8 2.1E-18 4.5E-23 134.2 12.3 164 92-286 2-171 (190)
55 PLN03084 alpha/beta hydrolase 99.8 8.2E-18 1.8E-22 144.0 16.8 113 73-200 111-232 (383)
56 COG0429 Predicted hydrolase of 99.8 2.7E-18 5.8E-23 138.6 12.9 205 69-282 52-309 (345)
57 PRK14875 acetoin dehydrogenase 99.8 2.9E-18 6.3E-23 148.0 14.0 196 75-286 117-349 (371)
58 KOG4667|consensus 99.8 6.8E-18 1.5E-22 127.4 13.5 208 67-286 11-237 (269)
59 PRK10162 acetyl esterase; Prov 99.8 1.1E-17 2.4E-22 140.8 16.0 206 66-285 57-287 (318)
60 PRK11126 2-succinyl-6-hydroxy- 99.8 6.3E-18 1.4E-22 137.2 13.5 98 91-200 2-102 (242)
61 TIGR03101 hydr2_PEP hydrolase, 99.8 1.1E-17 2.3E-22 135.9 14.2 126 68-203 2-137 (266)
62 TIGR02821 fghA_ester_D S-formy 99.8 2.8E-17 6.1E-22 135.7 16.9 198 75-286 23-254 (275)
63 KOG2100|consensus 99.8 1E-17 2.2E-22 154.1 15.0 211 60-286 492-724 (755)
64 PLN02442 S-formylglutathione h 99.8 9.1E-17 2E-21 133.1 18.4 199 75-286 28-260 (283)
65 PF01738 DLH: Dienelactone hyd 99.8 8.3E-18 1.8E-22 134.4 11.8 169 79-286 1-187 (218)
66 KOG1838|consensus 99.8 3.2E-17 6.8E-22 137.1 15.2 197 61-264 88-339 (409)
67 PLN02872 triacylglycerol lipas 99.8 1E-17 2.3E-22 143.7 12.4 129 63-200 41-197 (395)
68 PLN00021 chlorophyllase 99.7 1.3E-16 2.8E-21 133.0 17.7 176 77-286 37-238 (313)
69 TIGR01836 PHA_synth_III_C poly 99.7 5E-17 1.1E-21 139.0 14.5 103 91-201 62-172 (350)
70 COG0412 Dienelactone hydrolase 99.7 4E-16 8.7E-21 125.1 18.1 181 68-285 4-199 (236)
71 TIGR01392 homoserO_Ac_trn homo 99.7 1.9E-17 4E-22 141.7 10.3 120 73-200 12-162 (351)
72 PRK08775 homoserine O-acetyltr 99.7 1.7E-16 3.7E-21 135.4 15.2 198 75-286 44-317 (343)
73 PRK05855 short chain dehydroge 99.7 8.7E-17 1.9E-21 146.8 13.3 102 73-188 9-115 (582)
74 COG2945 Predicted hydrolase of 99.7 6.3E-16 1.4E-20 115.1 13.7 176 67-286 5-186 (210)
75 TIGR00976 /NonD putative hydro 99.7 5.9E-16 1.3E-20 139.7 14.7 126 72-204 2-136 (550)
76 PRK00175 metX homoserine O-ace 99.7 3.9E-16 8.4E-21 134.8 12.3 118 75-200 31-182 (379)
77 PLN02980 2-oxoglutarate decarb 99.7 9.1E-16 2E-20 152.4 16.0 187 90-286 1370-1617(1655)
78 KOG2281|consensus 99.7 5.3E-16 1.2E-20 134.0 12.3 208 67-285 614-843 (867)
79 TIGR01838 PHA_synth_I poly(R)- 99.7 2.7E-15 5.8E-20 132.5 16.7 201 77-286 172-453 (532)
80 PF02230 Abhydrolase_2: Phosph 99.7 2.7E-15 5.8E-20 119.6 14.7 171 83-286 6-197 (216)
81 PF07859 Abhydrolase_3: alpha/ 99.7 2.8E-16 6E-21 125.0 8.1 180 94-285 1-205 (211)
82 PF12715 Abhydrolase_7: Abhydr 99.6 5.6E-16 1.2E-20 128.5 8.3 206 64-283 86-342 (390)
83 PF02129 Peptidase_S15: X-Pro 99.6 1.7E-15 3.7E-20 125.0 11.3 201 75-283 1-267 (272)
84 COG0657 Aes Esterase/lipase [L 99.6 2.6E-14 5.6E-19 120.4 17.8 199 73-284 58-283 (312)
85 PF02273 Acyl_transf_2: Acyl t 99.6 1E-14 2.2E-19 112.6 12.9 208 70-286 6-235 (294)
86 KOG2564|consensus 99.6 6.2E-15 1.3E-19 115.9 11.0 112 78-197 61-179 (343)
87 COG0400 Predicted esterase [Ge 99.6 1.3E-14 2.9E-19 112.8 12.4 160 86-284 13-186 (207)
88 PF06342 DUF1057: Alpha/beta h 99.6 4.6E-14 1E-18 112.0 14.3 186 87-279 31-244 (297)
89 PF10503 Esterase_phd: Esteras 99.6 3.9E-14 8.4E-19 111.4 13.3 185 80-274 2-196 (220)
90 PF00561 Abhydrolase_1: alpha/ 99.6 5.7E-16 1.2E-20 124.3 2.5 159 120-286 1-213 (230)
91 KOG1515|consensus 99.6 1.5E-13 3.1E-18 114.5 16.7 130 69-207 64-214 (336)
92 KOG2984|consensus 99.6 6.7E-15 1.5E-19 110.3 7.9 200 74-285 28-253 (277)
93 KOG1553|consensus 99.6 2.5E-15 5.4E-20 121.3 4.9 184 64-264 212-400 (517)
94 COG4099 Predicted peptidase [G 99.5 8.6E-14 1.9E-18 110.4 10.9 160 73-275 168-343 (387)
95 PF12740 Chlorophyllase2: Chlo 99.5 2.9E-12 6.4E-17 102.1 17.0 166 87-286 13-203 (259)
96 KOG2382|consensus 99.5 4.8E-13 1E-17 108.7 12.7 191 88-286 49-291 (315)
97 PRK06765 homoserine O-acetyltr 99.5 7.2E-13 1.6E-17 113.9 14.5 117 76-199 40-195 (389)
98 PF05677 DUF818: Chlamydia CHL 99.5 3.4E-13 7.4E-18 109.7 11.5 123 60-188 106-236 (365)
99 COG3571 Predicted hydrolase of 99.5 3.7E-12 8.1E-17 92.1 14.3 168 84-286 7-179 (213)
100 PRK07868 acyl-CoA synthetase; 99.4 2.5E-12 5.4E-17 123.8 15.7 103 90-201 66-178 (994)
101 COG3208 GrsT Predicted thioest 99.4 1.5E-12 3.3E-17 101.5 11.5 186 88-285 4-214 (244)
102 PRK05371 x-prolyl-dipeptidyl a 99.4 1.2E-12 2.7E-17 121.2 12.4 167 112-284 273-495 (767)
103 cd00707 Pancreat_lipase_like P 99.4 8.1E-13 1.8E-17 108.8 10.0 108 89-201 34-148 (275)
104 COG3509 LpqC Poly(3-hydroxybut 99.4 1.7E-12 3.6E-17 103.6 11.1 128 73-200 41-179 (312)
105 TIGR03230 lipo_lipase lipoprot 99.4 1.7E-12 3.6E-17 111.9 11.6 107 89-200 39-154 (442)
106 COG1505 Serine proteases of th 99.4 8.4E-13 1.8E-17 114.2 9.5 236 25-276 359-609 (648)
107 TIGR01839 PHA_synth_II poly(R) 99.4 8E-12 1.7E-16 109.7 14.9 200 78-285 200-479 (560)
108 PF06821 Ser_hydrolase: Serine 99.4 3.2E-12 6.9E-17 97.3 10.6 147 94-286 1-151 (171)
109 PF12146 Hydrolase_4: Putative 99.4 1.6E-12 3.5E-17 85.5 7.7 74 76-155 1-78 (79)
110 KOG3043|consensus 99.4 5.2E-12 1.1E-16 96.6 11.5 161 80-285 29-206 (242)
111 COG0596 MhpC Predicted hydrola 99.4 1.2E-10 2.5E-15 94.5 18.2 100 91-200 21-123 (282)
112 PF07224 Chlorophyllase: Chlor 99.3 7.4E-11 1.6E-15 92.5 15.1 112 80-201 34-158 (307)
113 KOG4627|consensus 99.3 9.7E-12 2.1E-16 93.7 9.7 181 80-285 57-244 (270)
114 KOG2624|consensus 99.3 2.3E-11 5E-16 103.6 12.5 131 63-200 45-199 (403)
115 PF05728 UPF0227: Uncharacteri 99.3 4E-11 8.6E-16 92.3 12.6 164 94-286 2-169 (187)
116 COG4757 Predicted alpha/beta h 99.3 2.3E-11 4.9E-16 93.5 9.8 206 69-283 8-253 (281)
117 PF08840 BAAT_C: BAAT / Acyl-C 99.3 6.5E-12 1.4E-16 99.5 7.1 138 149-286 4-160 (213)
118 KOG2237|consensus 99.3 4.3E-11 9.4E-16 104.4 11.8 204 64-274 439-659 (712)
119 PF08538 DUF1749: Protein of u 99.2 1.8E-10 4E-15 93.7 10.9 108 89-201 31-149 (303)
120 COG1770 PtrB Protease II [Amin 99.2 9.6E-10 2.1E-14 96.7 15.8 205 64-275 417-637 (682)
121 COG3545 Predicted esterase of 99.2 1.7E-09 3.6E-14 80.1 14.3 148 92-285 3-153 (181)
122 PF03403 PAF-AH_p_II: Platelet 99.2 1.3E-10 2.9E-15 99.5 9.5 106 89-200 98-262 (379)
123 TIGR03502 lipase_Pla1_cef extr 99.2 1.5E-10 3.2E-15 106.0 10.1 93 90-188 448-576 (792)
124 PF03959 FSH1: Serine hydrolas 99.2 2E-10 4.3E-15 91.1 9.3 161 90-285 3-199 (212)
125 PF10230 DUF2305: Uncharacteri 99.1 1.2E-09 2.6E-14 89.5 12.6 106 91-201 2-123 (266)
126 COG4188 Predicted dienelactone 99.1 8.5E-10 1.8E-14 91.5 11.4 188 90-285 70-291 (365)
127 PF09752 DUF2048: Uncharacteri 99.1 4E-09 8.7E-14 87.2 13.5 196 80-285 78-326 (348)
128 PF07819 PGAP1: PGAP1-like pro 99.1 2.4E-09 5.2E-14 85.4 11.8 107 90-201 3-124 (225)
129 COG2936 Predicted acyl esteras 99.1 3.4E-09 7.4E-14 93.1 13.6 130 66-202 19-161 (563)
130 KOG2112|consensus 99.0 3E-09 6.5E-14 81.1 10.9 161 91-284 3-184 (206)
131 COG2021 MET2 Homoserine acetyl 99.0 1.9E-09 4.2E-14 89.2 10.5 116 76-198 35-180 (368)
132 PF06028 DUF915: Alpha/beta hy 99.0 1.9E-09 4.1E-14 87.0 9.1 181 90-284 10-230 (255)
133 KOG2551|consensus 99.0 1.3E-08 2.9E-13 78.1 12.0 101 149-285 90-200 (230)
134 cd00312 Esterase_lipase Estera 99.0 2.7E-09 5.9E-14 95.7 8.9 120 79-200 79-213 (493)
135 KOG3847|consensus 98.9 1.1E-08 2.5E-13 82.2 11.1 107 88-200 115-275 (399)
136 COG3243 PhaC Poly(3-hydroxyalk 98.9 1.5E-08 3.2E-13 85.2 11.2 103 91-201 107-218 (445)
137 PF00975 Thioesterase: Thioest 98.9 1.9E-08 4.2E-13 80.8 10.8 98 92-199 1-103 (229)
138 PF00151 Lipase: Lipase; Inte 98.9 7.3E-09 1.6E-13 87.1 8.1 107 89-201 69-188 (331)
139 PRK04940 hypothetical protein; 98.9 7.2E-08 1.6E-12 72.9 12.5 100 167-286 60-160 (180)
140 PF03583 LIP: Secretory lipase 98.8 4.2E-08 9.1E-13 81.4 11.5 85 110-202 18-115 (290)
141 PRK10439 enterobactin/ferric e 98.8 2E-07 4.4E-12 81.0 16.1 191 67-285 181-389 (411)
142 PF10340 DUF2424: Protein of u 98.8 5.1E-08 1.1E-12 82.0 11.7 115 80-203 107-238 (374)
143 COG2272 PnbA Carboxylesterase 98.8 1.8E-08 3.9E-13 86.5 8.9 124 73-201 76-218 (491)
144 PF06057 VirJ: Bacterial virul 98.8 8.4E-08 1.8E-12 72.8 10.5 143 92-260 3-152 (192)
145 KOG3101|consensus 98.8 5.6E-08 1.2E-12 74.0 8.5 163 88-262 41-230 (283)
146 PF11144 DUF2920: Protein of u 98.7 2.7E-07 5.9E-12 77.9 12.7 124 73-201 16-220 (403)
147 TIGR01849 PHB_depoly_PhaZ poly 98.7 3.2E-07 7E-12 78.7 13.0 97 92-202 103-210 (406)
148 PF03096 Ndr: Ndr family; Int 98.7 1.5E-07 3.2E-12 76.2 10.3 204 71-286 4-257 (283)
149 KOG3253|consensus 98.7 1.6E-07 3.5E-12 81.9 10.9 160 90-286 175-343 (784)
150 PF00135 COesterase: Carboxyle 98.7 1.2E-07 2.6E-12 86.0 9.8 119 79-199 109-244 (535)
151 PF05990 DUF900: Alpha/beta hy 98.7 2.2E-07 4.7E-12 74.6 10.0 106 89-201 16-138 (233)
152 PF00756 Esterase: Putative es 98.6 3.1E-07 6.6E-12 74.9 9.6 121 76-201 5-151 (251)
153 PF01674 Lipase_2: Lipase (cla 98.6 2.7E-07 5.8E-12 72.8 8.6 87 93-188 3-96 (219)
154 PTZ00472 serine carboxypeptida 98.6 1.2E-06 2.7E-11 77.3 13.2 122 76-201 60-217 (462)
155 KOG2565|consensus 98.5 6E-07 1.3E-11 74.2 8.8 114 75-195 132-259 (469)
156 KOG2931|consensus 98.5 6.5E-06 1.4E-10 66.2 14.1 121 66-200 22-157 (326)
157 COG1073 Hydrolases of the alph 98.5 4E-08 8.6E-13 81.8 0.8 177 90-286 87-272 (299)
158 KOG3975|consensus 98.5 4.3E-06 9.4E-11 65.6 11.8 105 89-199 27-146 (301)
159 PLN02733 phosphatidylcholine-s 98.4 1.1E-06 2.3E-11 76.7 8.8 92 103-203 106-204 (440)
160 PRK10252 entF enterobactin syn 98.4 3.3E-06 7.3E-11 84.5 12.7 98 90-199 1067-1170(1296)
161 COG3319 Thioesterase domains o 98.4 2.1E-06 4.5E-11 69.3 8.2 98 92-201 1-104 (257)
162 COG4814 Uncharacterized protei 98.3 4.6E-06 1E-10 65.6 9.5 102 93-201 47-177 (288)
163 PF05577 Peptidase_S28: Serine 98.3 8.3E-06 1.8E-10 72.1 12.2 107 90-201 28-149 (434)
164 PF12048 DUF3530: Protein of u 98.3 6.7E-05 1.5E-09 62.9 15.2 155 65-259 61-258 (310)
165 COG4782 Uncharacterized protei 98.2 8.3E-06 1.8E-10 67.7 9.2 106 89-201 114-235 (377)
166 PF05057 DUF676: Putative seri 98.2 8.6E-06 1.9E-10 64.8 7.5 92 89-186 2-97 (217)
167 COG3150 Predicted esterase [Ge 98.1 1.8E-05 4E-10 58.3 8.4 90 94-201 2-92 (191)
168 COG0627 Predicted esterase [Ge 98.1 5.4E-05 1.2E-09 63.3 11.6 114 89-202 52-189 (316)
169 PF10142 PhoPQ_related: PhoPQ- 98.0 0.0001 2.2E-09 62.6 12.2 133 154-286 159-301 (367)
170 PF11339 DUF3141: Protein of u 98.0 0.00014 3.1E-09 63.3 13.0 70 117-198 98-173 (581)
171 KOG1516|consensus 98.0 2.1E-05 4.4E-10 71.7 7.6 106 91-198 112-230 (545)
172 KOG2183|consensus 98.0 2.7E-05 5.8E-10 65.6 7.4 104 92-200 81-203 (492)
173 KOG3724|consensus 97.9 4.6E-05 1E-09 69.0 8.6 103 91-198 89-218 (973)
174 PF00450 Peptidase_S10: Serine 97.9 0.00015 3.2E-09 63.7 11.6 123 75-201 22-182 (415)
175 KOG4388|consensus 97.9 4.3E-05 9.3E-10 67.0 6.9 112 78-199 384-507 (880)
176 KOG4840|consensus 97.8 6.8E-05 1.5E-09 58.0 6.7 104 91-201 36-145 (299)
177 COG1075 LipA Predicted acetylt 97.7 0.00016 3.5E-09 61.5 8.4 101 91-202 59-166 (336)
178 KOG2541|consensus 97.7 0.00083 1.8E-08 53.7 10.5 100 92-200 24-128 (296)
179 smart00824 PKS_TE Thioesterase 97.6 0.00054 1.2E-08 53.7 9.8 86 102-198 10-100 (212)
180 COG2819 Predicted hydrolase of 97.6 0.0015 3.3E-08 52.5 12.0 47 154-200 124-172 (264)
181 COG2382 Fes Enterochelin ester 97.6 0.0021 4.6E-08 52.5 12.7 121 76-201 80-213 (299)
182 PF07082 DUF1350: Protein of u 97.5 0.0018 3.9E-08 51.5 10.5 101 89-197 15-122 (250)
183 KOG1282|consensus 97.5 0.002 4.4E-08 56.4 11.6 125 73-202 53-215 (454)
184 PLN02209 serine carboxypeptida 97.5 0.0025 5.4E-08 56.1 12.0 123 75-201 50-213 (437)
185 PLN03016 sinapoylglucose-malat 97.4 0.0027 5.8E-08 55.8 11.9 123 75-201 48-211 (433)
186 PF05705 DUF829: Eukaryotic pr 97.4 0.0011 2.3E-08 53.7 8.1 173 94-275 2-206 (240)
187 PF04083 Abhydro_lipase: Parti 97.3 0.00064 1.4E-08 42.2 4.9 45 64-108 10-60 (63)
188 KOG2182|consensus 97.3 0.0021 4.5E-08 55.9 9.5 106 89-199 84-206 (514)
189 PLN02633 palmitoyl protein thi 97.3 0.0042 9E-08 51.3 10.6 101 92-201 26-132 (314)
190 KOG1551|consensus 97.2 0.0026 5.7E-08 50.8 8.0 190 89-285 111-343 (371)
191 KOG3967|consensus 97.1 0.0063 1.4E-07 47.0 9.1 103 89-196 99-223 (297)
192 PF02089 Palm_thioest: Palmito 97.0 0.0018 3.9E-08 52.8 5.7 102 90-200 4-116 (279)
193 PF06259 Abhydrolase_8: Alpha/ 96.9 0.09 2E-06 40.2 14.4 52 148-200 91-145 (177)
194 PF11288 DUF3089: Protein of u 96.9 0.0018 3.9E-08 50.5 5.1 40 148-188 77-116 (207)
195 PF02450 LCAT: Lecithin:choles 96.9 0.0064 1.4E-07 52.9 8.8 82 106-201 66-161 (389)
196 TIGR03712 acc_sec_asp2 accesso 96.9 0.014 3.1E-07 50.9 10.6 118 73-201 272-391 (511)
197 cd00741 Lipase Lipase. Lipase 96.8 0.0051 1.1E-07 46.0 6.3 49 149-199 12-66 (153)
198 PF08386 Abhydrolase_4: TAP-li 96.7 0.0029 6.2E-08 43.9 4.5 39 247-286 34-72 (103)
199 PLN02606 palmitoyl-protein thi 96.7 0.021 4.6E-07 47.1 10.1 100 92-201 27-133 (306)
200 PF11187 DUF2974: Protein of u 96.6 0.0052 1.1E-07 49.0 5.8 47 153-199 70-123 (224)
201 PF01764 Lipase_3: Lipase (cla 96.6 0.0039 8.5E-08 45.7 4.9 39 148-188 47-85 (140)
202 PF01083 Cutinase: Cutinase; 96.4 0.032 6.9E-07 42.9 8.5 49 148-198 64-120 (179)
203 COG3946 VirJ Type IV secretory 96.4 0.027 5.9E-07 47.9 8.6 96 77-182 245-341 (456)
204 COG2939 Carboxypeptidase C (ca 96.3 0.029 6.3E-07 49.2 8.8 117 79-199 87-235 (498)
205 PF04301 DUF452: Protein of un 96.3 0.0094 2E-07 46.8 5.1 78 90-198 10-88 (213)
206 KOG4389|consensus 96.1 0.049 1.1E-06 47.6 9.3 92 87-180 131-231 (601)
207 cd00519 Lipase_3 Lipase (class 96.1 0.013 2.8E-07 47.0 5.3 50 149-200 112-168 (229)
208 PLN02454 triacylglycerol lipas 95.8 0.016 3.4E-07 50.1 4.9 42 146-187 207-248 (414)
209 PF03283 PAE: Pectinacetyleste 95.8 0.049 1.1E-06 46.8 7.9 38 148-186 137-175 (361)
210 PF07519 Tannase: Tannase and 95.7 0.19 4.2E-06 44.9 11.7 115 78-201 16-151 (474)
211 PLN02517 phosphatidylcholine-s 95.7 0.03 6.5E-07 50.4 6.4 84 107-200 158-263 (642)
212 PLN02408 phospholipase A1 95.4 0.028 6E-07 47.9 5.0 40 149-188 182-221 (365)
213 PF06441 EHN: Epoxide hydrolas 95.4 0.018 4E-07 40.3 3.3 55 54-109 56-110 (112)
214 PLN02571 triacylglycerol lipas 95.2 0.033 7.1E-07 48.2 4.8 40 148-187 207-246 (413)
215 KOG4540|consensus 94.9 0.069 1.5E-06 43.4 5.5 50 148-199 259-308 (425)
216 COG5153 CVT17 Putative lipase 94.9 0.069 1.5E-06 43.4 5.5 50 148-199 259-308 (425)
217 PLN02324 triacylglycerol lipas 94.9 0.053 1.1E-06 46.9 5.2 41 147-187 195-235 (415)
218 COG3673 Uncharacterized conser 94.9 0.48 1E-05 39.4 10.2 95 88-188 28-143 (423)
219 PF05576 Peptidase_S37: PS-10 94.8 0.15 3.2E-06 43.9 7.5 100 87-197 59-166 (448)
220 PLN02802 triacylglycerol lipas 94.5 0.056 1.2E-06 47.8 4.5 40 149-188 312-351 (509)
221 PLN02162 triacylglycerol lipas 94.1 0.082 1.8E-06 46.3 4.6 35 150-186 263-297 (475)
222 PLN02753 triacylglycerol lipas 94.0 0.085 1.8E-06 46.9 4.5 40 148-187 290-332 (531)
223 KOG2369|consensus 93.9 0.2 4.4E-06 43.8 6.5 72 106-188 125-203 (473)
224 PLN02213 sinapoylglucose-malat 93.9 0.34 7.3E-06 41.1 7.9 76 121-201 3-97 (319)
225 PLN00413 triacylglycerol lipas 93.9 0.1 2.2E-06 45.9 4.7 35 150-186 269-303 (479)
226 PLN02934 triacylglycerol lipas 93.8 0.11 2.4E-06 46.0 4.9 37 149-187 305-341 (515)
227 PLN02761 lipase class 3 family 93.6 0.11 2.4E-06 46.1 4.6 40 148-187 271-314 (527)
228 PLN02310 triacylglycerol lipas 93.5 0.11 2.3E-06 45.0 4.2 38 150-187 190-229 (405)
229 COG4947 Uncharacterized protei 93.4 0.48 1E-05 35.7 6.8 56 145-202 81-138 (227)
230 PLN02719 triacylglycerol lipas 93.2 0.15 3.2E-06 45.3 4.6 40 148-187 276-318 (518)
231 PF09994 DUF2235: Uncharacteri 93.2 0.64 1.4E-05 38.5 8.3 42 146-188 72-113 (277)
232 PLN03037 lipase class 3 family 92.7 0.15 3.3E-06 45.3 4.1 21 167-187 318-338 (525)
233 PLN02847 triacylglycerol lipas 92.4 1.6 3.5E-05 39.7 10.0 21 167-187 251-271 (633)
234 KOG4372|consensus 92.1 0.29 6.3E-06 42.0 4.9 88 89-185 78-168 (405)
235 KOG1283|consensus 92.0 3.5 7.6E-05 34.5 10.6 125 74-202 11-168 (414)
236 PF08237 PE-PPE: PE-PPE domain 91.6 0.98 2.1E-05 36.1 7.2 24 165-188 46-69 (225)
237 KOG4569|consensus 90.3 0.38 8.3E-06 41.0 4.0 38 149-188 155-192 (336)
238 KOG2521|consensus 89.3 13 0.00028 31.8 12.2 88 89-182 37-124 (350)
239 COG4822 CbiK Cobalamin biosynt 87.9 2.9 6.4E-05 32.7 6.8 59 85-161 132-191 (265)
240 COG4287 PqaA PhoPQ-activated p 87.8 0.25 5.4E-06 41.8 1.1 134 150-285 216-367 (507)
241 COG2830 Uncharacterized protei 83.9 1.2 2.7E-05 33.1 2.9 78 91-198 11-88 (214)
242 PF05277 DUF726: Protein of un 83.6 3.5 7.6E-05 35.2 6.0 36 165-200 218-260 (345)
243 KOG2029|consensus 79.2 5.4 0.00012 36.4 5.7 39 147-185 506-544 (697)
244 KOG1202|consensus 78.9 13 0.00028 37.2 8.4 92 89-198 2121-2217(2376)
245 COG1073 Hydrolases of the alph 75.9 9.2 0.0002 31.2 6.2 111 77-188 31-153 (299)
246 PF12242 Eno-Rase_NADH_b: NAD( 73.5 8.9 0.00019 24.7 4.1 44 145-188 17-61 (78)
247 PF10081 Abhydrolase_9: Alpha/ 71.7 32 0.0007 28.5 7.9 34 167-200 109-147 (289)
248 cd07224 Pat_like Patatin-like 59.5 11 0.00024 30.3 3.3 37 151-188 14-50 (233)
249 PF07519 Tannase: Tannase and 58.6 7.6 0.00016 35.0 2.3 40 247-286 353-403 (474)
250 PF06792 UPF0261: Uncharacteri 55.1 1.4E+02 0.0031 26.2 9.3 28 168-195 96-125 (403)
251 PRK02399 hypothetical protein; 54.2 1.5E+02 0.0034 26.1 9.4 28 168-195 98-127 (406)
252 COG5441 Uncharacterized conser 52.8 98 0.0021 26.0 7.4 90 94-188 4-114 (401)
253 PRK05282 (alpha)-aspartyl dipe 52.6 24 0.00052 28.4 4.1 37 91-127 31-69 (233)
254 COG0552 FtsY Signal recognitio 51.4 1.6E+02 0.0034 25.3 8.9 71 116-196 218-292 (340)
255 PF11713 Peptidase_C80: Peptid 51.1 12 0.00027 28.0 2.1 29 151-179 86-116 (157)
256 TIGR02069 cyanophycinase cyano 49.3 82 0.0018 25.7 6.7 39 89-127 26-65 (250)
257 PF06850 PHB_depo_C: PHB de-po 48.7 26 0.00055 27.3 3.4 40 247-286 134-177 (202)
258 KOG4287|consensus 48.2 3.6 7.8E-05 34.8 -1.2 33 151-183 160-192 (402)
259 PRK10279 hypothetical protein; 47.3 21 0.00045 30.0 3.1 35 151-188 20-54 (300)
260 cd07198 Patatin Patatin-like p 46.2 24 0.00053 26.6 3.1 35 151-188 13-47 (172)
261 COG2240 PdxK Pyridoxal/pyridox 46.1 1.7E+02 0.0038 24.3 8.2 82 117-201 26-114 (281)
262 PF00326 Peptidase_S9: Prolyl 45.6 1E+02 0.0022 23.9 6.7 66 90-163 143-211 (213)
263 PF10605 3HBOH: 3HB-oligomer h 44.9 14 0.00029 34.0 1.7 33 169-201 287-322 (690)
264 PF06309 Torsin: Torsin; Inte 44.7 24 0.00053 25.3 2.6 21 88-108 49-69 (127)
265 COG3340 PepE Peptidase E [Amin 44.2 55 0.0012 25.9 4.7 38 90-127 31-70 (224)
266 cd07225 Pat_PNPLA6_PNPLA7 Pata 43.7 27 0.00058 29.5 3.2 34 151-187 30-63 (306)
267 cd07212 Pat_PNPLA9 Patatin-lik 43.2 39 0.00085 28.6 4.1 37 152-188 15-53 (312)
268 TIGR00128 fabD malonyl CoA-acy 42.4 25 0.00055 29.0 2.9 31 154-186 72-102 (290)
269 PRK13690 hypothetical protein; 41.5 66 0.0014 24.5 4.5 31 145-175 4-34 (184)
270 cd07207 Pat_ExoU_VipD_like Exo 39.9 34 0.00073 26.3 3.1 34 152-188 15-48 (194)
271 cd07227 Pat_Fungal_NTE1 Fungal 39.6 34 0.00074 28.2 3.2 33 152-187 26-58 (269)
272 cd07230 Pat_TGL4-5_like Triacy 39.5 34 0.00074 30.3 3.3 35 151-188 88-122 (421)
273 cd07210 Pat_hypo_W_succinogene 38.2 40 0.00087 26.8 3.3 34 152-188 16-49 (221)
274 PF08484 Methyltransf_14: C-me 37.7 98 0.0021 23.3 5.1 36 166-201 68-105 (160)
275 PRK10824 glutaredoxin-4; Provi 37.0 1.5E+02 0.0032 20.9 5.9 79 90-188 14-93 (115)
276 COG2312 Erythromycin esterase 36.3 53 0.0011 28.7 3.8 88 98-185 55-159 (405)
277 smart00827 PKS_AT Acyl transfe 35.9 51 0.0011 27.4 3.8 32 152-186 70-101 (298)
278 PRK12467 peptide synthase; Pro 35.2 1.3E+02 0.0029 35.3 7.6 86 91-188 3692-3778(3956)
279 KOG2872|consensus 35.1 40 0.00088 28.0 2.8 77 90-175 251-336 (359)
280 cd07218 Pat_iPLA2 Calcium-inde 34.0 55 0.0012 26.6 3.5 35 151-187 15-50 (245)
281 TIGR02690 resist_ArsH arsenica 33.9 87 0.0019 25.0 4.5 30 150-180 108-141 (219)
282 PF09949 DUF2183: Uncharacteri 33.7 1.6E+02 0.0034 20.2 7.5 83 106-195 11-97 (100)
283 cd07228 Pat_NTE_like_bacteria 33.1 56 0.0012 24.7 3.3 34 152-188 16-49 (175)
284 PF10686 DUF2493: Protein of u 32.5 58 0.0013 20.6 2.7 34 90-125 30-63 (71)
285 cd00382 beta_CA Carbonic anhyd 32.5 74 0.0016 22.5 3.6 32 149-182 43-74 (119)
286 PF14253 AbiH: Bacteriophage a 32.4 35 0.00076 27.9 2.2 13 166-178 234-246 (270)
287 TIGR03131 malonate_mdcH malona 32.3 61 0.0013 26.9 3.7 30 154-186 66-95 (295)
288 PF04260 DUF436: Protein of un 32.3 71 0.0015 24.1 3.5 26 150-175 2-27 (172)
289 COG0331 FabD (acyl-carrier-pro 32.2 81 0.0018 26.7 4.3 42 144-186 63-104 (310)
290 cd07205 Pat_PNPLA6_PNPLA7_NTE1 32.2 58 0.0012 24.6 3.2 34 152-188 16-49 (175)
291 TIGR02816 pfaB_fam PfaB family 31.6 50 0.0011 30.4 3.1 28 158-187 258-285 (538)
292 PF00698 Acyl_transf_1: Acyl t 31.5 38 0.00083 28.6 2.3 32 152-186 72-103 (318)
293 PF09419 PGP_phosphatase: Mito 31.5 1.3E+02 0.0029 22.8 5.0 51 117-177 38-88 (168)
294 cd07204 Pat_PNPLA_like Patatin 30.5 64 0.0014 26.1 3.4 37 151-188 14-52 (243)
295 COG0529 CysC Adenylylsulfate k 29.9 2.7E+02 0.0058 21.7 8.0 38 89-127 20-59 (197)
296 COG3007 Uncharacterized paraqu 29.6 2.2E+02 0.0048 24.0 6.1 55 146-200 19-79 (398)
297 cd03146 GAT1_Peptidase_E Type 29.1 2.9E+02 0.0062 21.7 7.4 38 90-127 30-68 (212)
298 cd00883 beta_CA_cladeA Carboni 29.0 78 0.0017 24.3 3.5 33 150-184 66-98 (182)
299 cd07209 Pat_hypo_Ecoli_Z1214_l 28.9 62 0.0014 25.5 3.0 34 152-188 14-47 (215)
300 KOG1199|consensus 28.3 2.7E+02 0.0059 21.4 6.0 80 91-182 8-97 (260)
301 cd01819 Patatin_and_cPLA2 Pata 28.1 80 0.0017 23.4 3.3 33 152-185 14-46 (155)
302 COG0541 Ffh Signal recognition 27.9 4.5E+02 0.0097 23.6 8.6 66 115-196 178-247 (451)
303 COG1752 RssA Predicted esteras 27.9 61 0.0013 27.2 2.9 33 152-187 27-59 (306)
304 PLN03006 carbonate dehydratase 27.2 87 0.0019 26.3 3.6 32 151-184 158-189 (301)
305 KOG0855|consensus 27.1 1.9E+02 0.0041 22.0 4.9 59 65-127 68-132 (211)
306 PLN02213 sinapoylglucose-malat 26.9 70 0.0015 27.1 3.1 28 247-274 233-260 (319)
307 cd03129 GAT1_Peptidase_E_like 26.2 3.2E+02 0.0069 21.3 7.1 17 168-184 114-130 (210)
308 TIGR00632 vsr DNA mismatch end 25.8 1.2E+02 0.0026 21.5 3.6 11 90-100 55-65 (117)
309 KOG2385|consensus 25.8 2.7E+02 0.0058 25.5 6.4 35 166-200 446-487 (633)
310 TIGR01440 conserved hypothetic 25.5 1E+02 0.0022 23.3 3.3 26 150-175 2-27 (172)
311 PF10566 Glyco_hydro_97: Glyco 25.1 1.8E+02 0.0039 24.2 5.0 63 110-178 36-98 (273)
312 PRK05368 homoserine O-succinyl 25.1 1.9E+02 0.004 24.5 5.2 38 144-187 117-154 (302)
313 PF13728 TraF: F plasmid trans 24.5 1.4E+02 0.0031 23.6 4.3 44 90-138 121-164 (215)
314 cd00884 beta_CA_cladeB Carboni 23.7 1.2E+02 0.0025 23.7 3.5 34 150-185 72-105 (190)
315 COG4475 Uncharacterized protei 23.6 1.7E+02 0.0037 21.8 4.0 30 147-176 4-33 (180)
316 KOG0780|consensus 23.6 5.2E+02 0.011 22.9 8.4 64 116-195 180-247 (483)
317 PF01734 Patatin: Patatin-like 23.6 63 0.0014 24.2 2.1 21 168-188 28-48 (204)
318 PF08394 Arc_trans_TRASH: Arch 23.6 26 0.00055 19.1 -0.1 14 11-24 23-36 (37)
319 COG4553 DepA Poly-beta-hydroxy 23.5 4.6E+02 0.0099 22.2 9.7 102 89-201 101-210 (415)
320 COG1506 DAP2 Dipeptidyl aminop 23.0 3.1E+02 0.0068 25.8 6.9 64 89-162 549-617 (620)
321 PF01583 APS_kinase: Adenylyls 23.0 1.3E+02 0.0029 22.5 3.6 36 91-127 1-38 (156)
322 PLN03016 sinapoylglucose-malat 22.9 98 0.0021 27.6 3.4 28 247-274 347-374 (433)
323 PLN00416 carbonate dehydratase 22.6 1.2E+02 0.0026 24.9 3.6 34 150-185 125-158 (258)
324 PF07945 Toxin_16: Janus-atrac 22.4 29 0.00063 17.8 0.0 12 9-20 9-20 (36)
325 PLN02752 [acyl-carrier protein 22.2 93 0.002 26.6 3.1 18 169-186 126-143 (343)
326 cd03131 GATase1_HTS Type 1 glu 22.2 61 0.0013 24.8 1.7 39 143-187 79-117 (175)
327 cd07211 Pat_PNPLA8 Patatin-lik 21.9 63 0.0014 27.2 1.9 35 152-186 24-60 (308)
328 KOG0094|consensus 21.8 2.9E+02 0.0062 21.8 5.2 55 105-174 82-136 (221)
329 PLN02994 1-aminocyclopropane-1 21.6 2.1E+02 0.0045 21.3 4.4 52 149-200 96-151 (153)
330 PRK15219 carbonic anhydrase; P 21.4 1.4E+02 0.003 24.4 3.6 33 150-184 128-160 (245)
331 cd07208 Pat_hypo_Ecoli_yjju_li 21.4 70 0.0015 26.1 2.1 35 152-188 14-48 (266)
332 cd07222 Pat_PNPLA4 Patatin-lik 21.4 1E+02 0.0022 25.1 2.9 35 151-186 14-50 (246)
333 cd07220 Pat_PNPLA2 Patatin-lik 21.3 1.1E+02 0.0024 25.0 3.1 37 151-188 19-57 (249)
334 PRK05844 pyruvate flavodoxin o 21.3 1.3E+02 0.0027 23.2 3.3 40 95-134 4-44 (186)
335 cd07232 Pat_PLPL Patain-like p 21.2 94 0.002 27.5 2.9 35 151-188 82-116 (407)
336 PTZ00472 serine carboxypeptida 20.8 1E+02 0.0022 27.8 3.0 28 247-274 364-391 (462)
337 TIGR03334 IOR_beta indolepyruv 20.7 93 0.002 24.0 2.5 40 95-134 3-43 (189)
338 PF13242 Hydrolase_like: HAD-h 20.6 1.9E+02 0.0042 18.0 3.6 45 154-201 9-54 (75)
339 cd07213 Pat17_PNPLA8_PNPLA9_li 20.6 68 0.0015 26.7 1.8 37 152-188 18-55 (288)
340 PF00484 Pro_CA: Carbonic anhy 20.4 2.2E+02 0.0048 20.8 4.5 35 148-184 38-72 (153)
341 PF05116 S6PP: Sucrose-6F-phos 20.4 93 0.002 25.2 2.6 26 152-177 167-192 (247)
342 PLN03014 carbonic anhydrase 20.1 1.2E+02 0.0027 26.0 3.2 33 150-184 205-237 (347)
343 cd03145 GAT1_cyanophycinase Ty 20.1 4.3E+02 0.0094 20.8 6.3 17 168-184 117-133 (217)
No 1
>KOG1552|consensus
Probab=100.00 E-value=1.8e-35 Score=229.76 Aligned_cols=231 Identities=60% Similarity=1.033 Sum_probs=197.1
Q ss_pred cCCChhhhhhhccccCCCCceeeeeCCCCCCceEEEecCccccccccccCCccccEEEeccCCCEEEEEEEeecCCCCeE
Q psy4394 14 FPPCPSRIASKVAFLPPESTYSFTPTESGSSTYHVQFNDKAEWQYGDNERSNIEGFFTRTSRGNRLACMFMKCSPNARFT 93 (286)
Q Consensus 14 ~~~~~~~~~~~~~f~~p~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~p~ 93 (286)
|+++...++.+++|..... ....+....+. ..+.++.+..++..|..+.+.++.|.....++
T Consensus 1 ~~~~~~~iaaklaf~~~~~-----------~~~~~~~~~~~-------~~~~v~v~~~~t~rgn~~~~~y~~~~~~~~~~ 62 (258)
T KOG1552|consen 1 MPPVTSSIAAKLAFFPPEP-----------PRLLLLPEIRA-------MREFVEVFKVKTSRGNEIVCMYVRPPEAAHPT 62 (258)
T ss_pred CCccchhHHHHhhccccCC-----------cCeeecccccc-------cCCccceEEeecCCCCEEEEEEEcCccccceE
Confidence 7899999999999882221 11111111111 11257778888999999999999887667799
Q ss_pred EEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCCChhhHHHHHHHHHHHHHHHhCCCCCcEEEEE
Q psy4394 94 ILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSEKNLYADIDAAWNTLRTRYGISPENIILYG 173 (286)
Q Consensus 94 vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G 173 (286)
++|.||+..+.++...++..+....+++++.+|| +|+|.|.+.++..+..+|+.++.+|+++.+| +.++|+|+|
T Consensus 63 lly~hGNa~Dlgq~~~~~~~l~~~ln~nv~~~DY-----SGyG~S~G~psE~n~y~Di~avye~Lr~~~g-~~~~Iil~G 136 (258)
T KOG1552|consen 63 LLYSHGNAADLGQMVELFKELSIFLNCNVVSYDY-----SGYGRSSGKPSERNLYADIKAVYEWLRNRYG-SPERIILYG 136 (258)
T ss_pred EEEcCCcccchHHHHHHHHHHhhcccceEEEEec-----ccccccCCCcccccchhhHHHHHHHHHhhcC-CCceEEEEE
Confidence 9999999998888888998888778999999999 9999999999999999999999999999998 788999999
Q ss_pred eecChHHHHHHHhhcCccEEEEeCCCCcccccccccccccccccccchhhhcccccccccCCccccCCCCCCCCCCEEEE
Q psy4394 174 QSIGTVPTIDLASRYQVGAVILHSPLMSGMRVAFPRTKRTWFFDVFPRVIFANVKTPIMGLSTLENIDKVPKVTSPVLVI 253 (286)
Q Consensus 174 ~S~Gg~~a~~~a~~~~i~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii 253 (286)
+|+|+..++.+|.+..++++|+.+|+.++.+.+.+.....++.+.|+ .++.++.+++|+|++
T Consensus 137 ~SiGt~~tv~Lasr~~~~alVL~SPf~S~~rv~~~~~~~~~~~d~f~------------------~i~kI~~i~~PVLii 198 (258)
T KOG1552|consen 137 QSIGTVPTVDLASRYPLAAVVLHSPFTSGMRVAFPDTKTTYCFDAFP------------------NIEKISKITCPVLII 198 (258)
T ss_pred ecCCchhhhhHhhcCCcceEEEeccchhhhhhhccCcceEEeecccc------------------ccCcceeccCCEEEE
Confidence 99999999999999999999999999998888877544445555555 688899999999999
Q ss_pred ecCCCCccChhHHHHHHHHCCCCCCceEecCCC
Q psy4394 254 HGTEDEVIDLSHGIAIYERCPRPVEPLWVEGLS 286 (286)
Q Consensus 254 ~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~ga~ 286 (286)
||++|++++..++.++++..+++.+-.|+.|+|
T Consensus 199 HgtdDevv~~sHg~~Lye~~k~~~epl~v~g~g 231 (258)
T KOG1552|consen 199 HGTDDEVVDFSHGKALYERCKEKVEPLWVKGAG 231 (258)
T ss_pred ecccCceecccccHHHHHhccccCCCcEEecCC
Confidence 999999999999999999999988899999986
No 2
>PRK13604 luxD acyl transferase; Provisional
Probab=99.96 E-value=1.9e-28 Score=199.50 Aligned_cols=210 Identities=15% Similarity=0.132 Sum_probs=152.3
Q ss_pred ccEEEeccCCCEEEEEEEeec---CCCCeEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCc-cCCCCCC
Q psy4394 67 EGFFTRTSRGNRLACMFMKCS---PNARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGY-GISTGRP 142 (286)
Q Consensus 67 ~~~~~~~~~g~~l~~~~~~~~---~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~-G~s~~~~ 142 (286)
.+..+.+.||.+|.+|+.+|+ .++.++||++||++.+...+..++..|+ +.||+|+.+|+ ||+ |.|++..
T Consensus 10 ~~~~~~~~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~~~~~~A~~La-~~G~~vLrfD~-----rg~~GeS~G~~ 83 (307)
T PRK13604 10 IDHVICLENGQSIRVWETLPKENSPKKNNTILIASGFARRMDHFAGLAEYLS-SNGFHVIRYDS-----LHHVGLSSGTI 83 (307)
T ss_pred hhheEEcCCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChHHHHHHHHHHH-HCCCEEEEecC-----CCCCCCCCCcc
Confidence 345567889999999999984 3466899999999998766777888887 55999999999 987 8888753
Q ss_pred ---ChhhHHHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhcCccEEEEeCCCCccccccccccccccc---c
Q psy4394 143 ---SEKNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRYQVGAVILHSPLMSGMRVAFPRTKRTWF---F 216 (286)
Q Consensus 143 ---~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~i~~~v~~~p~~~~~~~~~~~~~~~~~---~ 216 (286)
+......|+.++++|++++ +.++++|+||||||.+|+.+|....++++|+.+|+.+..+.........+. .
T Consensus 84 ~~~t~s~g~~Dl~aaid~lk~~---~~~~I~LiG~SmGgava~~~A~~~~v~~lI~~sp~~~l~d~l~~~~~~~~~~~p~ 160 (307)
T PRK13604 84 DEFTMSIGKNSLLTVVDWLNTR---GINNLGLIAASLSARIAYEVINEIDLSFLITAVGVVNLRDTLERALGYDYLSLPI 160 (307)
T ss_pred ccCcccccHHHHHHHHHHHHhc---CCCceEEEEECHHHHHHHHHhcCCCCCEEEEcCCcccHHHHHHHhhhcccccCcc
Confidence 2223468999999999886 345899999999999998777765899999999998844322211111000 0
Q ss_pred cccc------------hhhhcccccccccCCccccCCCCCCCCCCEEEEecCCCCccChhHHHHHHHHCCC-CCCceEec
Q psy4394 217 DVFP------------RVIFANVKTPIMGLSTLENIDKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPR-PVEPLWVE 283 (286)
Q Consensus 217 ~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~-~~~~~~~~ 283 (286)
...+ ..+...... .......++.+.+++++.|+|+|||++|++||+++++++++++++ +++++++|
T Consensus 161 ~~lp~~~d~~g~~l~~~~f~~~~~~-~~~~~~~s~i~~~~~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s~~kkl~~i~ 239 (307)
T PRK13604 161 DELPEDLDFEGHNLGSEVFVTDCFK-HGWDTLDSTINKMKGLDIPFIAFTANNDSWVKQSEVIDLLDSIRSEQCKLYSLI 239 (307)
T ss_pred cccccccccccccccHHHHHHHHHh-cCccccccHHHHHhhcCCCEEEEEcCCCCccCHHHHHHHHHHhccCCcEEEEeC
Confidence 0000 000000000 000112334466777889999999999999999999999999874 58999999
Q ss_pred CCC
Q psy4394 284 GLS 286 (286)
Q Consensus 284 ga~ 286 (286)
|++
T Consensus 240 Ga~ 242 (307)
T PRK13604 240 GSS 242 (307)
T ss_pred CCc
Confidence 985
No 3
>KOG4391|consensus
Probab=99.96 E-value=1.7e-28 Score=184.39 Aligned_cols=205 Identities=27% Similarity=0.387 Sum_probs=169.0
Q ss_pred ccccEEEeccCCCEEEEEEEeecCCCCeEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCCCh
Q psy4394 65 NIEGFFTRTSRGNRLACMFMKCSPNARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSE 144 (286)
Q Consensus 65 ~~~~~~~~~~~g~~l~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~~ 144 (286)
+.+.+.+.|+|..++++++.. .+.+.|+++++|+++++.+.....+.-+-.+++.+|+.++| ||+|.|.+.+++
T Consensus 53 pye~i~l~T~D~vtL~a~~~~-~E~S~pTlLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsY-----RGYG~S~GspsE 126 (300)
T KOG4391|consen 53 PYERIELRTRDKVTLDAYLML-SESSRPTLLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSY-----RGYGKSEGSPSE 126 (300)
T ss_pred CceEEEEEcCcceeEeeeeec-ccCCCceEEEEccCCCcccchhhHHHHHHHHcCceEEEEEe-----eccccCCCCccc
Confidence 467788999999999999887 45689999999999999988887777777788999999999 999999999999
Q ss_pred hhHHHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc--CccEEEEeCCCCcccccccccccccccccccchh
Q psy4394 145 KNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY--QVGAVILHSPLMSGMRVAFPRTKRTWFFDVFPRV 222 (286)
Q Consensus 145 ~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 222 (286)
.+..-|.+++++|+..+...|..+++++|.|.||++|..+|++. ++.++|+.+.+.+..+...+..... ....++.+
T Consensus 127 ~GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~i~~v~p~-~~k~i~~l 205 (300)
T KOG4391|consen 127 EGLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMAIPLVFPF-PMKYIPLL 205 (300)
T ss_pred cceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccchhhhhheeccc-hhhHHHHH
Confidence 99999999999999999989999999999999999999999987 9999999999988544443322110 00111211
Q ss_pred hhcccccccccCCccccCCCCCCCCCCEEEEecCCCCccChhHHHHHHHHCCCC-CCceEecCC
Q psy4394 223 IFANVKTPIMGLSTLENIDKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPRP-VEPLWVEGL 285 (286)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~-~~~~~~~ga 285 (286)
...+ .+.....+.+.+.|.|++.|..|++||+.+.+++++..++. |++..||++
T Consensus 206 c~kn---------~~~S~~ki~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~g 260 (300)
T KOG4391|consen 206 CYKN---------KWLSYRKIGQCRMPFLFISGLKDELVPPVMMRQLYELCPSRTKRLAEFPDG 260 (300)
T ss_pred HHHh---------hhcchhhhccccCceEEeecCccccCCcHHHHHHHHhCchhhhhheeCCCC
Confidence 1111 11134555677899999999999999999999999999887 899999986
No 4
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.94 E-value=4.3e-26 Score=193.57 Aligned_cols=215 Identities=22% Similarity=0.238 Sum_probs=144.7
Q ss_pred cccEEEeccCCCEEEEEEEeecC--CCCeEEEEecCCccccc-hhhHHHHhhccccceeEEEeeccCcCCCCccCCCCC-
Q psy4394 66 IEGFFTRTSRGNRLACMFMKCSP--NARFTILFSHGNAVDIG-QMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGR- 141 (286)
Q Consensus 66 ~~~~~~~~~~g~~l~~~~~~~~~--~~~p~vv~~HG~~~~~~-~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~- 141 (286)
.+...+++.||.++.++.+.|.+ .++++||++||++.+.. .+......+. +.||+|+++|+ ||||.|.+.
T Consensus 32 ~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~-~~Gy~V~~~D~-----rGhG~S~~~~ 105 (330)
T PLN02298 32 GSKSFFTSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFLA-QMGFACFALDL-----EGHGRSEGLR 105 (330)
T ss_pred cccceEEcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHHH-hCCCEEEEecC-----CCCCCCCCcc
Confidence 34556778899999998887643 45789999999986643 2344455566 44999999999 999998753
Q ss_pred ---CChhhHHHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc--CccEEEEeCCCCcccccccccc------
Q psy4394 142 ---PSEKNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY--QVGAVILHSPLMSGMRVAFPRT------ 210 (286)
Q Consensus 142 ---~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~~~~~~~~~~~------ 210 (286)
.+.....+|+.++++++......+..+++|+||||||.+++.++.++ +++++|+++|............
T Consensus 106 ~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 185 (330)
T PLN02298 106 AYVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRPPWPIPQIL 185 (330)
T ss_pred ccCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCcccCCchHHHHHH
Confidence 34556678999999999876434445899999999999999999887 7999999998754221110000
Q ss_pred --cccccccc----cchhhhccc---------ccccccCCc-------------c-ccCCCCCCCCCCEEEEecCCCCcc
Q psy4394 211 --KRTWFFDV----FPRVIFANV---------KTPIMGLST-------------L-ENIDKVPKVTSPVLVIHGTEDEVI 261 (286)
Q Consensus 211 --~~~~~~~~----~~~~~~~~~---------~~~~~~~~~-------------~-~~~~~~~~i~~Pvlii~G~~D~~v 261 (286)
...+.... ......... ......+.. . .....+.++++|+|++||++|.++
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~iv 265 (330)
T PLN02298 186 TFVARFLPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTDYLGKKLKDVSIPFIVLHGSADVVT 265 (330)
T ss_pred HHHHHHCCCCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHHHHHHHhhhhcCCCEEEEecCCCCCC
Confidence 00000000 000000000 000000000 0 012346678999999999999999
Q ss_pred ChhHHHHHHHHCCC-CCCceEecCCC
Q psy4394 262 DLSHGIAIYERCPR-PVEPLWVEGLS 286 (286)
Q Consensus 262 ~~~~~~~l~~~~~~-~~~~~~~~ga~ 286 (286)
|++.+++++++++. .+++++++|++
T Consensus 266 p~~~~~~l~~~i~~~~~~l~~~~~a~ 291 (330)
T PLN02298 266 DPDVSRALYEEAKSEDKTIKIYDGMM 291 (330)
T ss_pred CHHHHHHHHHHhccCCceEEEcCCcE
Confidence 99999999999864 36899999874
No 5
>KOG1455|consensus
Probab=99.94 E-value=4e-26 Score=181.14 Aligned_cols=215 Identities=21% Similarity=0.284 Sum_probs=155.4
Q ss_pred ccccEEEeccCCCEEEEEEEeecC--CCCeEEEEecCCcccc-chhhHHHHhhccccceeEEEeeccCcCCCCccCCCCC
Q psy4394 65 NIEGFFTRTSRGNRLACMFMKCSP--NARFTILFSHGNAVDI-GQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGR 141 (286)
Q Consensus 65 ~~~~~~~~~~~g~~l~~~~~~~~~--~~~p~vv~~HG~~~~~-~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~ 141 (286)
......+++.+|.++....|.|.. +++..|+++||+++.. ..+...+..++ ..||.|+++|+ +|||.|++.
T Consensus 26 ~~~~~~~~n~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~-~~g~~v~a~D~-----~GhG~SdGl 99 (313)
T KOG1455|consen 26 TYSESFFTNPRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRLA-KSGFAVYAIDY-----EGHGRSDGL 99 (313)
T ss_pred ceeeeeEEcCCCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHHHH-hCCCeEEEeec-----cCCCcCCCC
Confidence 345566778999999999988843 6778999999999876 45556777777 55999999999 999999875
Q ss_pred ----CChhhHHHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc--CccEEEEeCCCCcccccccc-------
Q psy4394 142 ----PSEKNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY--QVGAVILHSPLMSGMRVAFP------- 208 (286)
Q Consensus 142 ----~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~~~~~~~~~------- 208 (286)
++....++|+...++.++.+......+.+++||||||++++.++.++ ..+++|+++|.....+...+
T Consensus 100 ~~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p~v~~~ 179 (313)
T KOG1455|consen 100 HAYVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHPPVISI 179 (313)
T ss_pred cccCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCcHHHHH
Confidence 56778889999999988877655566899999999999999999977 88999999987653222211
Q ss_pred -----ccccccccc--------ccchhhh-cccccccc-------------cCC-ccccCCCCCCCCCCEEEEecCCCCc
Q psy4394 209 -----RTKRTWFFD--------VFPRVIF-ANVKTPIM-------------GLS-TLENIDKVPKVTSPVLVIHGTEDEV 260 (286)
Q Consensus 209 -----~~~~~~~~~--------~~~~~~~-~~~~~~~~-------------~~~-~~~~~~~~~~i~~Pvlii~G~~D~~ 260 (286)
.....|..- .++.... .....+.. .+. ..+..+.+.+++.|++++||++|.+
T Consensus 180 l~~l~~liP~wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtvPflilHG~dD~V 259 (313)
T KOG1455|consen 180 LTLLSKLIPTWKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTVPFLILHGTDDKV 259 (313)
T ss_pred HHHHHHhCCceeecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhcccccccEEEEecCCCcc
Confidence 111111100 0000000 00000000 001 1122356788999999999999999
Q ss_pred cChhHHHHHHHHCCCC-CCceEecCC
Q psy4394 261 IDLSHGIAIYERCPRP-VEPLWVEGL 285 (286)
Q Consensus 261 v~~~~~~~l~~~~~~~-~~~~~~~ga 285 (286)
+.++.++++++...+. |++.+|||+
T Consensus 260 TDp~~Sk~Lye~A~S~DKTlKlYpGm 285 (313)
T KOG1455|consen 260 TDPKVSKELYEKASSSDKTLKLYPGM 285 (313)
T ss_pred cCcHHHHHHHHhccCCCCceeccccH
Confidence 9999999999999876 899999984
No 6
>PHA02857 monoglyceride lipase; Provisional
Probab=99.94 E-value=1.5e-25 Score=185.62 Aligned_cols=207 Identities=22% Similarity=0.292 Sum_probs=144.9
Q ss_pred eccCCCEEEEEEEeecCCCCeEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCC----ChhhH
Q psy4394 72 RTSRGNRLACMFMKCSPNARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRP----SEKNL 147 (286)
Q Consensus 72 ~~~~g~~l~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~----~~~~~ 147 (286)
.+.||..+.+.+|.|.+.++++|+++||++++...|..+...+.+ .||+|+++|+ ||||.|.+.. .....
T Consensus 6 ~~~~g~~l~~~~~~~~~~~~~~v~llHG~~~~~~~~~~~~~~l~~-~g~~via~D~-----~G~G~S~~~~~~~~~~~~~ 79 (276)
T PHA02857 6 FNLDNDYIYCKYWKPITYPKALVFISHGAGEHSGRYEELAENISS-LGILVFSHDH-----IGHGRSNGEKMMIDDFGVY 79 (276)
T ss_pred ecCCCCEEEEEeccCCCCCCEEEEEeCCCccccchHHHHHHHHHh-CCCEEEEccC-----CCCCCCCCccCCcCCHHHH
Confidence 367999999999988666778999999999999999998888874 4999999999 9999987542 33445
Q ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc--CccEEEEeCCCCccccccccc----------cccccc
Q psy4394 148 YADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY--QVGAVILHSPLMSGMRVAFPR----------TKRTWF 215 (286)
Q Consensus 148 ~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~~~~~~~~~~----------~~~~~~ 215 (286)
.+|+...++++++... ..+++++|||+||.+|+.+|.++ .++++|+++|........... ......
T Consensus 80 ~~d~~~~l~~~~~~~~--~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (276)
T PHA02857 80 VRDVVQHVVTIKSTYP--GVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEAVPRLNLLAAKLMGIFYPNKIV 157 (276)
T ss_pred HHHHHHHHHHHHhhCC--CCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccccccccHHHHHHHHHHHHhCCCCcc
Confidence 6777777777766543 35899999999999999999877 689999999976421100000 000000
Q ss_pred ccccchhhh-------cccccccc-----------cCC--ccccCCCCCCCCCCEEEEecCCCCccChhHHHHHHHHCCC
Q psy4394 216 FDVFPRVIF-------ANVKTPIM-----------GLS--TLENIDKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPR 275 (286)
Q Consensus 216 ~~~~~~~~~-------~~~~~~~~-----------~~~--~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~ 275 (286)
......... ........ ... ..+..+.++++++|+|++||++|.++|++.++++.+.+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~~ 237 (276)
T PHA02857 158 GKLCPESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKTPILILQGTNNEISDVSGAYYFMQHANC 237 (276)
T ss_pred CCCCHhhccCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCCCCEEEEecCCCCcCChHHHHHHHHHccC
Confidence 000000000 00000000 000 0011245678899999999999999999999999998865
Q ss_pred CCCceEecCCC
Q psy4394 276 PVEPLWVEGLS 286 (286)
Q Consensus 276 ~~~~~~~~ga~ 286 (286)
.+++.+++++|
T Consensus 238 ~~~~~~~~~~g 248 (276)
T PHA02857 238 NREIKIYEGAK 248 (276)
T ss_pred CceEEEeCCCc
Confidence 56899999875
No 7
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.94 E-value=5.6e-25 Score=187.99 Aligned_cols=215 Identities=20% Similarity=0.301 Sum_probs=146.5
Q ss_pred cccEEEeccCCCEEEEEEEeec-CCCCeEEEEecCCccccch-hhHHHHhhccccceeEEEeeccCcCCCCccCCCCC--
Q psy4394 66 IEGFFTRTSRGNRLACMFMKCS-PNARFTILFSHGNAVDIGQ-MSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGR-- 141 (286)
Q Consensus 66 ~~~~~~~~~~g~~l~~~~~~~~-~~~~p~vv~~HG~~~~~~~-~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~-- 141 (286)
.++.++.+.+|.++.+..+.|. .+++++|||+||++++... |..+...+++ .||+|+++|+ ||||.|++.
T Consensus 61 ~~~~~~~~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~-~g~~v~~~D~-----~G~G~S~~~~~ 134 (349)
T PLN02385 61 TEESYEVNSRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIARKIAS-SGYGVFAMDY-----PGFGLSEGLHG 134 (349)
T ss_pred eeeeeEEcCCCCEEEEEEEecCCCCCCeEEEEECCCCCccchHHHHHHHHHHh-CCCEEEEecC-----CCCCCCCCCCC
Confidence 3444566789999999888774 3567999999999887654 4567777764 4999999999 999999754
Q ss_pred --CChhhHHHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc--CccEEEEeCCCCcccccccc---------
Q psy4394 142 --PSEKNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY--QVGAVILHSPLMSGMRVAFP--------- 208 (286)
Q Consensus 142 --~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~~~~~~~~~--------- 208 (286)
.+...+.+|+.++++.+.....++..+++|+||||||.+++.++.++ .++++|+++|.........+
T Consensus 135 ~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~~~~~~~~ 214 (349)
T PLN02385 135 YIPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPPLVLQILI 214 (349)
T ss_pred CcCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCchHHHHHHH
Confidence 24566678888888887665434455899999999999999999888 79999999986542111000
Q ss_pred -------cc---cccccccc-cchh----hhcccccccc---c-------CCc-cccCCCCCCCCCCEEEEecCCCCccC
Q psy4394 209 -------RT---KRTWFFDV-FPRV----IFANVKTPIM---G-------LST-LENIDKVPKVTSPVLVIHGTEDEVID 262 (286)
Q Consensus 209 -------~~---~~~~~~~~-~~~~----~~~~~~~~~~---~-------~~~-~~~~~~~~~i~~Pvlii~G~~D~~v~ 262 (286)
.. ........ +... .......... . +.. .+....+.++++|+|++||++|.++|
T Consensus 215 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i~~P~Lii~G~~D~vv~ 294 (349)
T PLN02385 215 LLANLLPKAKLVPQKDLAELAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSLPLLILHGEADKVTD 294 (349)
T ss_pred HHHHHCCCceecCCCccccccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhcccCCCCEEEEEeCCCCccC
Confidence 00 00000000 0000 0000000000 0 000 11124567889999999999999999
Q ss_pred hhHHHHHHHHCCC-CCCceEecCCC
Q psy4394 263 LSHGIAIYERCPR-PVEPLWVEGLS 286 (286)
Q Consensus 263 ~~~~~~l~~~~~~-~~~~~~~~ga~ 286 (286)
++.++.+++.+.. .+++++++|+|
T Consensus 295 ~~~~~~l~~~~~~~~~~l~~i~~~g 319 (349)
T PLN02385 295 PSVSKFLYEKASSSDKKLKLYEDAY 319 (349)
T ss_pred hHHHHHHHHHcCCCCceEEEeCCCe
Confidence 9999999999864 36899999875
No 8
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.93 E-value=3.1e-25 Score=201.50 Aligned_cols=221 Identities=17% Similarity=0.128 Sum_probs=160.7
Q ss_pred cccCCccccEEEeccCCCEEEEEEEeecCC----CCeEEEEecCCccccch--hhHHHHhhccccceeEEEeeccCcCCC
Q psy4394 60 DNERSNIEGFFTRTSRGNRLACMFMKCSPN----ARFTILFSHGNAVDIGQ--MSSFFTGLGSRINCNIFSYDYSGYDYS 133 (286)
Q Consensus 60 ~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~----~~p~vv~~HG~~~~~~~--~~~~~~~l~~~~g~~vi~~d~~~~~~~ 133 (286)
.......|.+++++.||.++.+|++.|.+. +.|+||++||++..... +...++.++ ..||.|+.+|+||+ -
T Consensus 359 ~~~~~~~e~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~-~~G~~V~~~n~RGS--~ 435 (620)
T COG1506 359 KVKLAEPEPVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLA-SAGYAVLAPNYRGS--T 435 (620)
T ss_pred ccccCCceEEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHh-cCCeEEEEeCCCCC--C
Confidence 345667788999999999999999998432 24999999999865433 455666666 45999999999555 4
Q ss_pred CccCCCCC----CChhhHHHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc-CccEEEEeCCCCcccccccc
Q psy4394 134 GYGISTGR----PSEKNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY-QVGAVILHSPLMSGMRVAFP 208 (286)
Q Consensus 134 G~G~s~~~----~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-~i~~~v~~~p~~~~~~~~~~ 208 (286)
|+|+.-.. ..-....+|+.++++++.+...+|++|++++|+|+||++++.++.+. .+++.+...+.++.......
T Consensus 436 GyG~~F~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~~f~a~~~~~~~~~~~~~~~~ 515 (620)
T COG1506 436 GYGREFADAIRGDWGGVDLEDLIAAVDALVKLPLVDPERIGITGGSYGGYMTLLAATKTPRFKAAVAVAGGVDWLLYFGE 515 (620)
T ss_pred ccHHHHHHhhhhccCCccHHHHHHHHHHHHhCCCcChHHeEEeccChHHHHHHHHHhcCchhheEEeccCcchhhhhccc
Confidence 44433211 11234468999999988888889999999999999999999999988 78999888887763332222
Q ss_pred cccccccccccchhhhcccccccccCCccccCCCCCCCCCCEEEEecCCCCccChhHHHHHHHHCCCC---CCceEecCC
Q psy4394 209 RTKRTWFFDVFPRVIFANVKTPIMGLSTLENIDKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPRP---VEPLWVEGL 285 (286)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~---~~~~~~~ga 285 (286)
.....+.. .......... ....+...+++..+.++++|+|+|||++|..||.+++.+++++++.. ++++++|++
T Consensus 516 ~~~~~~~~--~~~~~~~~~~-~~~~~~~~sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e 592 (620)
T COG1506 516 STEGLRFD--PEENGGGPPE-DREKYEDRSPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDE 592 (620)
T ss_pred cchhhcCC--HHHhCCCccc-ChHHHHhcChhhhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCC
Confidence 11111110 0000000000 23446677789999999999999999999999999999999988643 789999987
Q ss_pred C
Q psy4394 286 S 286 (286)
Q Consensus 286 ~ 286 (286)
|
T Consensus 593 ~ 593 (620)
T COG1506 593 G 593 (620)
T ss_pred C
Confidence 5
No 9
>PRK10749 lysophospholipase L2; Provisional
Probab=99.92 E-value=1.5e-23 Score=177.68 Aligned_cols=212 Identities=14% Similarity=0.122 Sum_probs=143.7
Q ss_pred cccEEEeccCCCEEEEEEEeecCCCCeEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCCC----
Q psy4394 66 IEGFFTRTSRGNRLACMFMKCSPNARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGR---- 141 (286)
Q Consensus 66 ~~~~~~~~~~g~~l~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~---- 141 (286)
.++.++...+|.++.+..+.+. .++++||++||.+++...|..++..+++ .||+|+++|+ ||||.|+..
T Consensus 30 ~~~~~~~~~~g~~l~~~~~~~~-~~~~~vll~HG~~~~~~~y~~~~~~l~~-~g~~v~~~D~-----~G~G~S~~~~~~~ 102 (330)
T PRK10749 30 REEAEFTGVDDIPIRFVRFRAP-HHDRVVVICPGRIESYVKYAELAYDLFH-LGYDVLIIDH-----RGQGRSGRLLDDP 102 (330)
T ss_pred ccceEEEcCCCCEEEEEEccCC-CCCcEEEEECCccchHHHHHHHHHHHHH-CCCeEEEEcC-----CCCCCCCCCCCCC
Confidence 4556666789999999988754 4567899999999888888888877774 4999999999 999998643
Q ss_pred -----CChhhHHHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc--CccEEEEeCCCCcccccccc------
Q psy4394 142 -----PSEKNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY--QVGAVILHSPLMSGMRVAFP------ 208 (286)
Q Consensus 142 -----~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~~~~~~~~~------ 208 (286)
.+...+.+|+.++++.+.+..+ ..+++++||||||.+++.++.++ .++++|+.+|..........
T Consensus 103 ~~~~~~~~~~~~~d~~~~~~~~~~~~~--~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~ 180 (330)
T PRK10749 103 HRGHVERFNDYVDDLAAFWQQEIQPGP--YRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPLPSWMARRI 180 (330)
T ss_pred CcCccccHHHHHHHHHHHHHHHHhcCC--CCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCCCcHHHHHH
Confidence 2345666788888877655433 35999999999999999999887 89999999986531100000
Q ss_pred --c------c-------ccccccccc--------chh---hhccc-ccccc-----c-------CCc-cccCCCCCCCCC
Q psy4394 209 --R------T-------KRTWFFDVF--------PRV---IFANV-KTPIM-----G-------LST-LENIDKVPKVTS 248 (286)
Q Consensus 209 --~------~-------~~~~~~~~~--------~~~---~~~~~-~~~~~-----~-------~~~-~~~~~~~~~i~~ 248 (286)
. . ...|....+ ... ..... ..+.. . +.. ......+.++++
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 260 (330)
T PRK10749 181 LNWAEGHPRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILAGEQVLAGAGDITT 260 (330)
T ss_pred HHHHHHhcCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHHHHHHHhhccCCCC
Confidence 0 0 000100000 000 00000 00000 0 000 011245677899
Q ss_pred CEEEEecCCCCccChhHHHHHHHHCCC------CCCceEecCCC
Q psy4394 249 PVLVIHGTEDEVIDLSHGIAIYERCPR------PVEPLWVEGLS 286 (286)
Q Consensus 249 Pvlii~G~~D~~v~~~~~~~l~~~~~~------~~~~~~~~ga~ 286 (286)
|+|++||++|.+++++.++.+++.+++ .++++++||++
T Consensus 261 P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gag 304 (330)
T PRK10749 261 PLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAY 304 (330)
T ss_pred CEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCc
Confidence 999999999999999999999887642 25799999985
No 10
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.92 E-value=2e-23 Score=180.81 Aligned_cols=212 Identities=13% Similarity=0.066 Sum_probs=143.3
Q ss_pred ccccEEEeccCCCEEEEEEEeec-CCCCeEEEEecCCcccc-chhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCC
Q psy4394 65 NIEGFFTRTSRGNRLACMFMKCS-PNARFTILFSHGNAVDI-GQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRP 142 (286)
Q Consensus 65 ~~~~~~~~~~~g~~l~~~~~~~~-~~~~p~vv~~HG~~~~~-~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~ 142 (286)
.++.+.++..+|..+.++++.|. +++.|+||++||.++.. ..|..+...++ +.||+|+++|+ ||+|.|.+.+
T Consensus 167 ~~e~v~i~~~~g~~l~g~l~~P~~~~~~P~Vli~gG~~~~~~~~~~~~~~~La-~~Gy~vl~~D~-----pG~G~s~~~~ 240 (414)
T PRK05077 167 ELKELEFPIPGGGPITGFLHLPKGDGPFPTVLVCGGLDSLQTDYYRLFRDYLA-PRGIAMLTIDM-----PSVGFSSKWK 240 (414)
T ss_pred ceEEEEEEcCCCcEEEEEEEECCCCCCccEEEEeCCcccchhhhHHHHHHHHH-hCCCEEEEECC-----CCCCCCCCCC
Confidence 46788888888889999998774 35678888888877654 34555566666 55999999999 9999987643
Q ss_pred ChhhHHHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc--CccEEEEeCCCCcccccccccccccccccccc
Q psy4394 143 SEKNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY--QVGAVILHSPLMSGMRVAFPRTKRTWFFDVFP 220 (286)
Q Consensus 143 ~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~ 220 (286)
...+......++++++.....+|.++|+++|||+||++|+.+|..+ +++++|+++|..+.......... .....+.
T Consensus 241 ~~~d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~~~~~~--~~p~~~~ 318 (414)
T PRK05077 241 LTQDSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTDPKRQQ--QVPEMYL 318 (414)
T ss_pred ccccHHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhhcchhhhh--hchHHHH
Confidence 3233334456788999888777888999999999999999999875 89999999987652111000000 0000000
Q ss_pred hhhhccc---ccc----cccCCccc--cCCC-CCCCCCCEEEEecCCCCccChhHHHHHHHHCCCCCCceEecCC
Q psy4394 221 RVIFANV---KTP----IMGLSTLE--NIDK-VPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPRPVEPLWVEGL 285 (286)
Q Consensus 221 ~~~~~~~---~~~----~~~~~~~~--~~~~-~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~ga 285 (286)
..+.... ... ...+..+. .... .+++++|+|+|||++|+++|+++++.+.+..++. +++.+|++
T Consensus 319 ~~la~~lg~~~~~~~~l~~~l~~~sl~~~~~l~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~~~~-~l~~i~~~ 392 (414)
T PRK05077 319 DVLASRLGMHDASDEALRVELNRYSLKVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLIASSSADG-KLLEIPFK 392 (414)
T ss_pred HHHHHHhCCCCCChHHHHHHhhhccchhhhhhccCCCCcEEEEecCCCCCCCHHHHHHHHHhCCCC-eEEEccCC
Confidence 0000000 000 00000111 1111 2568899999999999999999999988887765 78888874
No 11
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.91 E-value=2.7e-23 Score=172.21 Aligned_cols=211 Identities=21% Similarity=0.355 Sum_probs=149.4
Q ss_pred ccEEEeccCCCEEEEEEEeecCCCCeEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccCCC-CC----
Q psy4394 67 EGFFTRTSRGNRLACMFMKCSPNARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGIST-GR---- 141 (286)
Q Consensus 67 ~~~~~~~~~g~~l~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~-~~---- 141 (286)
.+..+...||..+.++.+.+...+..+||++||.+.+...|..++..+.. .||.|+++|. ||||.|. +.
T Consensus 10 ~~~~~~~~d~~~~~~~~~~~~~~~~g~Vvl~HG~~Eh~~ry~~la~~l~~-~G~~V~~~D~-----RGhG~S~r~~rg~~ 83 (298)
T COG2267 10 TEGYFTGADGTRLRYRTWAAPEPPKGVVVLVHGLGEHSGRYEELADDLAA-RGFDVYALDL-----RGHGRSPRGQRGHV 83 (298)
T ss_pred ccceeecCCCceEEEEeecCCCCCCcEEEEecCchHHHHHHHHHHHHHHh-CCCEEEEecC-----CCCCCCCCCCcCCc
Confidence 44456688999999999987655668999999999999999999999884 4999999999 9999997 43
Q ss_pred CChhhHHHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc--CccEEEEeCCCCcccc--cc--ccccccccc
Q psy4394 142 PSEKNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY--QVGAVILHSPLMSGMR--VA--FPRTKRTWF 215 (286)
Q Consensus 142 ~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~~~~~--~~--~~~~~~~~~ 215 (286)
..+..+..|+.++++.+.... ...+++++||||||.+++.++.++ .++++|+.+|+..... .. .........
T Consensus 84 ~~f~~~~~dl~~~~~~~~~~~--~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~~~~~~~~~~~~~~~~ 161 (298)
T COG2267 84 DSFADYVDDLDAFVETIAEPD--PGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGGAILRLILARLALKLL 161 (298)
T ss_pred hhHHHHHHHHHHHHHHHhccC--CCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCChhHHHHHHHHHhcccc
Confidence 234555677777777776642 345999999999999999999998 9999999999887441 01 000000000
Q ss_pred ccccchh---------------------hhccccccccc------------CCcc--ccCCCCCCCCCCEEEEecCCCCc
Q psy4394 216 FDVFPRV---------------------IFANVKTPIMG------------LSTL--ENIDKVPKVTSPVLVIHGTEDEV 260 (286)
Q Consensus 216 ~~~~~~~---------------------~~~~~~~~~~~------------~~~~--~~~~~~~~i~~Pvlii~G~~D~~ 260 (286)
....+.. ......++... .... ........+++|+|+++|++|.+
T Consensus 162 ~~~~p~~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~PvLll~g~~D~v 241 (298)
T COG2267 162 GRIRPKLPVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALPVLLLQGGDDRV 241 (298)
T ss_pred cccccccccCcccccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchhccccccCCEEEEecCCCcc
Confidence 0000000 00000111000 0111 12233556789999999999999
Q ss_pred cC-hhHHHHHHHHCCCC-CCceEecCC
Q psy4394 261 ID-LSHGIAIYERCPRP-VEPLWVEGL 285 (286)
Q Consensus 261 v~-~~~~~~l~~~~~~~-~~~~~~~ga 285 (286)
++ .+.+.+++++++.+ +++.+++|+
T Consensus 242 v~~~~~~~~~~~~~~~~~~~~~~~~g~ 268 (298)
T COG2267 242 VDNVEGLARFFERAGSPDKELKVIPGA 268 (298)
T ss_pred ccCcHHHHHHHHhcCCCCceEEecCCc
Confidence 99 79999999998877 689999886
No 12
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.91 E-value=1.6e-22 Score=173.97 Aligned_cols=213 Identities=23% Similarity=0.297 Sum_probs=147.2
Q ss_pred cccEEEeccCCCEEEEEEEeec-CCCCeEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCCC---
Q psy4394 66 IEGFFTRTSRGNRLACMFMKCS-PNARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGR--- 141 (286)
Q Consensus 66 ~~~~~~~~~~g~~l~~~~~~~~-~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~--- 141 (286)
.....+...++..+.+..+.|. ++++++||++||++++...|..+...+.+ .||+|+++|+ ||||.|++.
T Consensus 110 ~~~~~~~~~~~~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~~~~~~~a~~L~~-~Gy~V~~~D~-----rGhG~S~~~~~~ 183 (395)
T PLN02652 110 WATSLFYGARRNALFCRSWAPAAGEMRGILIIIHGLNEHSGRYLHFAKQLTS-CGFGVYAMDW-----IGHGGSDGLHGY 183 (395)
T ss_pred EEEEEEECCCCCEEEEEEecCCCCCCceEEEEECCchHHHHHHHHHHHHHHH-CCCEEEEeCC-----CCCCCCCCCCCC
Confidence 3445566778889999988874 45678999999999888778888888874 4999999999 999998864
Q ss_pred -CChhhHHHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc----CccEEEEeCCCCcccccc----------
Q psy4394 142 -PSEKNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY----QVGAVILHSPLMSGMRVA---------- 206 (286)
Q Consensus 142 -~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~----~i~~~v~~~p~~~~~~~~---------- 206 (286)
.+.....+|+.++++++..... ..+++++||||||.+++.++... .++++|+.+|........
T Consensus 184 ~~~~~~~~~Dl~~~l~~l~~~~~--~~~i~lvGhSmGG~ial~~a~~p~~~~~v~glVL~sP~l~~~~~~~~~~~~~~l~ 261 (395)
T PLN02652 184 VPSLDYVVEDTEAFLEKIRSENP--GVPCFLFGHSTGGAVVLKAASYPSIEDKLEGIVLTSPALRVKPAHPIVGAVAPIF 261 (395)
T ss_pred CcCHHHHHHHHHHHHHHHHHhCC--CCCEEEEEECHHHHHHHHHHhccCcccccceEEEECcccccccchHHHHHHHHHH
Confidence 2445567899999999987642 34899999999999999877542 689999999976422100
Q ss_pred ---ccccccccccc---cc---chhhhcccccccc---c---------CCccc-cCCCCCCCCCCEEEEecCCCCccChh
Q psy4394 207 ---FPRTKRTWFFD---VF---PRVIFANVKTPIM---G---------LSTLE-NIDKVPKVTSPVLVIHGTEDEVIDLS 264 (286)
Q Consensus 207 ---~~~~~~~~~~~---~~---~~~~~~~~~~~~~---~---------~~~~~-~~~~~~~i~~Pvlii~G~~D~~v~~~ 264 (286)
.+......... .. +........++.. . +...+ ....+.++++|+|++||++|.++|++
T Consensus 262 ~~~~p~~~~~~~~~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I~vPvLIi~G~~D~vvp~~ 341 (395)
T PLN02652 262 SLVAPRFQFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSVTVPFMVLHGTADRVTDPL 341 (395)
T ss_pred HHhCCCCcccCcccccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcccCCCCEEEEEeCCCCCCCHH
Confidence 00000000000 00 0000000000000 0 00000 12456788999999999999999999
Q ss_pred HHHHHHHHCCCC-CCceEecCCC
Q psy4394 265 HGIAIYERCPRP-VEPLWVEGLS 286 (286)
Q Consensus 265 ~~~~l~~~~~~~-~~~~~~~ga~ 286 (286)
.++++++++.+. +++.+++|++
T Consensus 342 ~a~~l~~~~~~~~k~l~~~~ga~ 364 (395)
T PLN02652 342 ASQDLYNEAASRHKDIKLYDGFL 364 (395)
T ss_pred HHHHHHHhcCCCCceEEEECCCe
Confidence 999999997654 7899999874
No 13
>PRK10566 esterase; Provisional
Probab=99.89 E-value=3.6e-22 Score=162.88 Aligned_cols=186 Identities=17% Similarity=0.241 Sum_probs=120.6
Q ss_pred CCCeEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCCC-C--Ch-------hhHHHHHHHHHHHH
Q psy4394 89 NARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGR-P--SE-------KNLYADIDAAWNTL 158 (286)
Q Consensus 89 ~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~-~--~~-------~~~~~d~~~~~~~l 158 (286)
++.|+||++||++++...+..+...+.+ .||+|+++|+ ||+|.+... . .. ....+|+.++++++
T Consensus 25 ~~~p~vv~~HG~~~~~~~~~~~~~~l~~-~G~~v~~~d~-----~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 98 (249)
T PRK10566 25 TPLPTVFFYHGFTSSKLVYSYFAVALAQ-AGFRVIMPDA-----PMHGARFSGDEARRLNHFWQILLQNMQEFPTLRAAI 98 (249)
T ss_pred CCCCEEEEeCCCCcccchHHHHHHHHHh-CCCEEEEecC-----CcccccCCCccccchhhHHHHHHHHHHHHHHHHHHH
Confidence 3568999999999888778777777764 5999999999 999875321 1 11 12346778888898
Q ss_pred HHHhCCCCCcEEEEEeecChHHHHHHHhhc-CccEEEEeCC--CCccc-ccccccccccccccccchhhhcccccccccC
Q psy4394 159 RTRYGISPENIILYGQSIGTVPTIDLASRY-QVGAVILHSP--LMSGM-RVAFPRTKRTWFFDVFPRVIFANVKTPIMGL 234 (286)
Q Consensus 159 ~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-~i~~~v~~~p--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (286)
.+...++.++++++|||+||.+++.++.++ .+++.+.+.+ ..... ...++... ............. ....
T Consensus 99 ~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~---~~~~ 172 (249)
T PRK10566 99 REEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGYFTSLARTLFPPLI---PETAAQQAEFNNI---VAPL 172 (249)
T ss_pred HhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHHHHHHHHHhccccc---ccccccHHHHHHH---HHHH
Confidence 887667888999999999999999998877 6665544322 11100 00000000 0000000000000 0011
Q ss_pred CccccCCCCCCC-CCCEEEEecCCCCccChhHHHHHHHHCCCC-----CCceEecCCC
Q psy4394 235 STLENIDKVPKV-TSPVLVIHGTEDEVIDLSHGIAIYERCPRP-----VEPLWVEGLS 286 (286)
Q Consensus 235 ~~~~~~~~~~~i-~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~-----~~~~~~~ga~ 286 (286)
..++....+.++ ++|+|++||++|+++|+++++++++.+++. .++++++|+|
T Consensus 173 ~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~ 230 (249)
T PRK10566 173 AEWEVTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEPGVR 230 (249)
T ss_pred hhcChhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecCCCC
Confidence 122233445555 689999999999999999999999988653 3566778865
No 14
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.89 E-value=2.8e-22 Score=163.68 Aligned_cols=192 Identities=15% Similarity=0.206 Sum_probs=122.4
Q ss_pred EEEEeecCCCCeEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCC----ChhhHHHHHHHHHH
Q psy4394 81 CMFMKCSPNARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRP----SEKNLYADIDAAWN 156 (286)
Q Consensus 81 ~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~----~~~~~~~d~~~~~~ 156 (286)
+..+.+...+.|+||++||++++...|...+..+.+ +|+|+++|+ ||||.|.... +..+..+|+.++++
T Consensus 3 ~~~~~~~~~~~~~iv~lhG~~~~~~~~~~~~~~l~~--~~~vi~~D~-----~G~G~S~~~~~~~~~~~~~~~~~~~~i~ 75 (257)
T TIGR03611 3 YELHGPPDADAPVVVLSSGLGGSGSYWAPQLDVLTQ--RFHVVTYDH-----RGTGRSPGELPPGYSIAHMADDVLQLLD 75 (257)
T ss_pred EEEecCCCCCCCEEEEEcCCCcchhHHHHHHHHHHh--ccEEEEEcC-----CCCCCCCCCCcccCCHHHHHHHHHHHHH
Confidence 334433224568999999999998888888777753 799999999 9999997543 22333334443333
Q ss_pred HHHHHhCCCCCcEEEEEeecChHHHHHHHhhc--CccEEEEeCCCCccccccc----------ccccc------------
Q psy4394 157 TLRTRYGISPENIILYGQSIGTVPTIDLASRY--QVGAVILHSPLMSGMRVAF----------PRTKR------------ 212 (286)
Q Consensus 157 ~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~~~~~~~~----------~~~~~------------ 212 (286)
..+ .++++++||||||.+++.++.++ .++++|+++++........ .....
T Consensus 76 ----~~~--~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (257)
T TIGR03611 76 ----ALN--IERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPDPHTRRCFDVRIALLQHAGPEAYVHAQALFLY 149 (257)
T ss_pred ----HhC--CCcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCChhHHHHHHHHHHHHhccCcchhhhhhhhhhc
Confidence 333 34899999999999999999887 7999999887554210000 00000
Q ss_pred --cccccccchhhhcc--ccccc----------ccCCccccCCCCCCCCCCEEEEecCCCCccChhHHHHHHHHCCCCCC
Q psy4394 213 --TWFFDVFPRVIFAN--VKTPI----------MGLSTLENIDKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPRPVE 278 (286)
Q Consensus 213 --~~~~~~~~~~~~~~--~~~~~----------~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~ 278 (286)
.|............ ..... ......+....++++++|+++++|++|..+|++.++++++.+++. +
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~-~ 228 (257)
T TIGR03611 150 PADWISENAARLAADEAHALAHFPGKANVLRRINALEAFDVSARLDRIQHPVLLIANRDDMLVPYTQSLRLAAALPNA-Q 228 (257)
T ss_pred cccHhhccchhhhhhhhhcccccCccHHHHHHHHHHHcCCcHHHhcccCccEEEEecCcCcccCHHHHHHHHHhcCCc-e
Confidence 00000000000000 00000 001111223456678999999999999999999999999998776 7
Q ss_pred ceEecCCC
Q psy4394 279 PLWVEGLS 286 (286)
Q Consensus 279 ~~~~~ga~ 286 (286)
+++++++|
T Consensus 229 ~~~~~~~g 236 (257)
T TIGR03611 229 LKLLPYGG 236 (257)
T ss_pred EEEECCCC
Confidence 88888875
No 15
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.88 E-value=1.4e-22 Score=153.54 Aligned_cols=184 Identities=20% Similarity=0.328 Sum_probs=135.5
Q ss_pred eEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCC---CCChhhHHHHHHHHHHHHHHHhCCCCCc
Q psy4394 92 FTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTG---RPSEKNLYADIDAAWNTLRTRYGISPEN 168 (286)
Q Consensus 92 p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~---~~~~~~~~~d~~~~~~~l~~~~~~~~~~ 168 (286)
..|+++||+.++..+...+.+.|.++ ||.|.++.| ||||.... ..+..+|.+|+.+..+++++. +.+ .
T Consensus 16 ~AVLllHGFTGt~~Dvr~Lgr~L~e~-GyTv~aP~y-----pGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~-gy~--e 86 (243)
T COG1647 16 RAVLLLHGFTGTPRDVRMLGRYLNEN-GYTVYAPRY-----PGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEA-GYD--E 86 (243)
T ss_pred EEEEEEeccCCCcHHHHHHHHHHHHC-CceEecCCC-----CCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHc-CCC--e
Confidence 78999999999999999888888755 999999999 99998763 367889999999999999976 334 9
Q ss_pred EEEEEeecChHHHHHHHhhcCccEEEEeCCCCcccccc--cccccccccccccc-------hhhh----cccccccccCC
Q psy4394 169 IILYGQSIGTVPTIDLASRYQVGAVILHSPLMSGMRVA--FPRTKRTWFFDVFP-------RVIF----ANVKTPIMGLS 235 (286)
Q Consensus 169 i~l~G~S~Gg~~a~~~a~~~~i~~~v~~~p~~~~~~~~--~~~~~~~~~~~~~~-------~~~~----~~~~~~~~~~~ 235 (286)
|+++|.||||.+|+.+|.++.++++|.+++........ +..... ++ +.++ .... .....+.....
T Consensus 87 I~v~GlSmGGv~alkla~~~p~K~iv~m~a~~~~k~~~~iie~~l~-y~-~~~kk~e~k~~e~~~~e~~~~~~~~~~~~~ 164 (243)
T COG1647 87 IAVVGLSMGGVFALKLAYHYPPKKIVPMCAPVNVKSWRIIIEGLLE-YF-RNAKKYEGKDQEQIDKEMKSYKDTPMTTTA 164 (243)
T ss_pred EEEEeecchhHHHHHHHhhCCccceeeecCCcccccchhhhHHHHH-HH-HHhhhccCCCHHHHHHHHHHhhcchHHHHH
Confidence 99999999999999999999999999998876522111 000000 00 0000 0000 00000000000
Q ss_pred c-----cccCCCCCCCCCCEEEEecCCCCccChhHHHHHHHHCCCC-CCceEecCCC
Q psy4394 236 T-----LENIDKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPRP-VEPLWVEGLS 286 (286)
Q Consensus 236 ~-----~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~-~~~~~~~ga~ 286 (286)
. .+....+..|..|+++++|.+|++||.+.+..+++...+. +++.+++++|
T Consensus 165 ~~~~~i~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~Sg 221 (243)
T COG1647 165 QLKKLIKDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSG 221 (243)
T ss_pred HHHHHHHHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCC
Confidence 0 1123566778999999999999999999999999998765 8999999876
No 16
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.88 E-value=3.2e-21 Score=159.72 Aligned_cols=196 Identities=17% Similarity=0.225 Sum_probs=129.5
Q ss_pred cCCCEEEEEEEeecCCCCeEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCC---ChhhHHHH
Q psy4394 74 SRGNRLACMFMKCSPNARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRP---SEKNLYAD 150 (286)
Q Consensus 74 ~~g~~l~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~---~~~~~~~d 150 (286)
.+|.+++++....+ ...+.|||+||.+++...|..++..+.+ +|+|+++|+ ||||.|+... +...+.+|
T Consensus 9 ~~~~~~~~~~~~~~-~~~~plvllHG~~~~~~~w~~~~~~L~~--~~~vi~~Dl-----~G~G~S~~~~~~~~~~~~~~~ 80 (276)
T TIGR02240 9 LDGQSIRTAVRPGK-EGLTPLLIFNGIGANLELVFPFIEALDP--DLEVIAFDV-----PGVGGSSTPRHPYRFPGLAKL 80 (276)
T ss_pred cCCcEEEEEEecCC-CCCCcEEEEeCCCcchHHHHHHHHHhcc--CceEEEECC-----CCCCCCCCCCCcCcHHHHHHH
Confidence 47788888765322 2346899999999999999989888864 799999999 9999997542 33444556
Q ss_pred HHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc--CccEEEEeCCCCcccc-----cc---cccccc--------
Q psy4394 151 IDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY--QVGAVILHSPLMSGMR-----VA---FPRTKR-------- 212 (286)
Q Consensus 151 ~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~~~~~-----~~---~~~~~~-------- 212 (286)
+.++++.+ ++ ++++|+||||||.+++.+|.++ +++++|++++...... .. ......
T Consensus 81 ~~~~i~~l----~~--~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (276)
T TIGR02240 81 AARMLDYL----DY--GQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKPKVLMMMASPRRYIQPSHGI 154 (276)
T ss_pred HHHHHHHh----Cc--CceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCchhHHHHhcCchhhhcccccc
Confidence 55555554 33 3899999999999999999998 9999999987653110 00 000000
Q ss_pred ----cccccccc---hhh---hcccccc-c----c---cCCccccCCCCCCCCCCEEEEecCCCCccChhHHHHHHHHCC
Q psy4394 213 ----TWFFDVFP---RVI---FANVKTP-I----M---GLSTLENIDKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCP 274 (286)
Q Consensus 213 ----~~~~~~~~---~~~---~~~~~~~-~----~---~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~ 274 (286)
.+....+. ... ....... . . .....+..+.++++++|+|+|+|++|+++|+++++++.+.++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~~~~~ 234 (276)
T TIGR02240 155 HIAPDIYGGAFRRDPELAMAHASKVRSGGKLGYYWQLFAGLGWTSIHWLHKIQQPTLVLAGDDDPIIPLINMRLLAWRIP 234 (276)
T ss_pred chhhhhccceeeccchhhhhhhhhcccCCCchHHHHHHHHcCCchhhHhhcCCCCEEEEEeCCCCcCCHHHHHHHHHhCC
Confidence 00000000 000 0000000 0 0 000111124467889999999999999999999999999998
Q ss_pred CCCCceEecC
Q psy4394 275 RPVEPLWVEG 284 (286)
Q Consensus 275 ~~~~~~~~~g 284 (286)
+. +++++++
T Consensus 235 ~~-~~~~i~~ 243 (276)
T TIGR02240 235 NA-ELHIIDD 243 (276)
T ss_pred CC-EEEEEcC
Confidence 75 7777765
No 17
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.88 E-value=4.7e-21 Score=158.60 Aligned_cols=202 Identities=17% Similarity=0.162 Sum_probs=127.2
Q ss_pred ccCCCEEEEEEEeecCCCCeEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCCChhhHHHHHH
Q psy4394 73 TSRGNRLACMFMKCSPNARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSEKNLYADID 152 (286)
Q Consensus 73 ~~~g~~l~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~~~~~~~d~~ 152 (286)
+.+|.++.+.... +...|+||++||++++...|..+...+.+ +|+|+++|+ ||||.|..........++..
T Consensus 12 ~~~~~~~~~~~~g--~~~~~~vv~~hG~~~~~~~~~~~~~~l~~--~~~vi~~D~-----~G~G~S~~~~~~~~~~~~~~ 82 (278)
T TIGR03056 12 TVGPFHWHVQDMG--PTAGPLLLLLHGTGASTHSWRDLMPPLAR--SFRVVAPDL-----PGHGFTRAPFRFRFTLPSMA 82 (278)
T ss_pred eECCEEEEEEecC--CCCCCeEEEEcCCCCCHHHHHHHHHHHhh--CcEEEeecC-----CCCCCCCCccccCCCHHHHH
Confidence 4477777766543 22458899999999998889988888864 799999999 99999875433111223333
Q ss_pred HHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc--CccEEEEeCCCCccccccc----ccccc-----ccc------
Q psy4394 153 AAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY--QVGAVILHSPLMSGMRVAF----PRTKR-----TWF------ 215 (286)
Q Consensus 153 ~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~~~~~~~~----~~~~~-----~~~------ 215 (286)
+.+..+.+..++ ++++|+||||||.+++.++..+ +++++|++++......... +.... .+.
T Consensus 83 ~~l~~~i~~~~~--~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (278)
T TIGR03056 83 EDLSALCAAEGL--SPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPYMARVLACNPFTPPMMSR 160 (278)
T ss_pred HHHHHHHHHcCC--CCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccccccccchhhHhhhhcccchHHHHh
Confidence 333333344443 4899999999999999999888 6899998876543211000 00000 000
Q ss_pred ----ccccchhhhc--------------cccccc----------ccCCccccCCCCCCCCCCEEEEecCCCCccChhHHH
Q psy4394 216 ----FDVFPRVIFA--------------NVKTPI----------MGLSTLENIDKVPKVTSPVLVIHGTEDEVIDLSHGI 267 (286)
Q Consensus 216 ----~~~~~~~~~~--------------~~~~~~----------~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~ 267 (286)
...+...... ...... ...........++++++|+++++|++|..+|.+.++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g~~D~~vp~~~~~ 240 (278)
T TIGR03056 161 GAADQQRVERLIRDTGSLLDKAGMTYYGRLIRSPAHVDGALSMMAQWDLAPLNRDLPRITIPLHLIAGEEDKAVPPDESK 240 (278)
T ss_pred hcccCcchhHHhhccccccccchhhHHHHhhcCchhhhHHHHHhhcccccchhhhcccCCCCEEEEEeCCCcccCHHHHH
Confidence 0000000000 000000 000000112345678999999999999999999999
Q ss_pred HHHHHCCCCCCceEecCCC
Q psy4394 268 AIYERCPRPVEPLWVEGLS 286 (286)
Q Consensus 268 ~l~~~~~~~~~~~~~~ga~ 286 (286)
.+.+.+++. ++..++++|
T Consensus 241 ~~~~~~~~~-~~~~~~~~g 258 (278)
T TIGR03056 241 RAATRVPTA-TLHVVPGGG 258 (278)
T ss_pred HHHHhccCC-eEEEECCCC
Confidence 998888765 788899875
No 18
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.88 E-value=1.1e-21 Score=163.87 Aligned_cols=196 Identities=16% Similarity=0.215 Sum_probs=125.3
Q ss_pred cCCCEEEEEEEeecCCCCeEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCC----------C
Q psy4394 74 SRGNRLACMFMKCSPNARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRP----------S 143 (286)
Q Consensus 74 ~~g~~l~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~----------~ 143 (286)
-+|..+.+.... .+.++||++||++++...|...+..+.. .|+|+++|+ ||||.|+... +
T Consensus 15 ~~~~~i~y~~~G---~~~~~vlllHG~~~~~~~w~~~~~~L~~--~~~vi~~Dl-----pG~G~S~~~~~~~~~~~~~~~ 84 (294)
T PLN02824 15 WKGYNIRYQRAG---TSGPALVLVHGFGGNADHWRKNTPVLAK--SHRVYAIDL-----LGYGYSDKPNPRSAPPNSFYT 84 (294)
T ss_pred EcCeEEEEEEcC---CCCCeEEEECCCCCChhHHHHHHHHHHh--CCeEEEEcC-----CCCCCCCCCccccccccccCC
Confidence 367777665442 2347899999999999999999998875 479999999 9999997532 2
Q ss_pred hhhHHHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc--CccEEEEeCCCCcccccc-ccc-----------
Q psy4394 144 EKNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY--QVGAVILHSPLMSGMRVA-FPR----------- 209 (286)
Q Consensus 144 ~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~~~~~~~-~~~----------- 209 (286)
..++.+|+.++++ +.++ ++++++||||||.+++.+|.++ +|+++|+++|........ .+.
T Consensus 85 ~~~~a~~l~~~l~----~l~~--~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (294)
T PLN02824 85 FETWGEQLNDFCS----DVVG--DPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQN 158 (294)
T ss_pred HHHHHHHHHHHHH----HhcC--CCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHHHH
Confidence 2333444444444 3343 4999999999999999999988 899999998754211000 000
Q ss_pred -ccc-----cccccc-----cchh----h----------hcccccc------------cccCCc-cccCCCCCCCCCCEE
Q psy4394 210 -TKR-----TWFFDV-----FPRV----I----------FANVKTP------------IMGLST-LENIDKVPKVTSPVL 251 (286)
Q Consensus 210 -~~~-----~~~~~~-----~~~~----~----------~~~~~~~------------~~~~~~-~~~~~~~~~i~~Pvl 251 (286)
... .++... .... + ....... ...+.. ......+.++++|+|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l 238 (294)
T PLN02824 159 LLRETAVGKAFFKSVATPETVKNILCQCYHDDSAVTDELVEAILRPGLEPGAVDVFLDFISYSGGPLPEELLPAVKCPVL 238 (294)
T ss_pred HHhchhHHHHHHHhhcCHHHHHHHHHHhccChhhccHHHHHHHHhccCCchHHHHHHHHhccccccchHHHHhhcCCCeE
Confidence 000 000000 0000 0 0000000 000000 011234677899999
Q ss_pred EEecCCCCccChhHHHHHHHHCCCCCCceEecCCC
Q psy4394 252 VIHGTEDEVIDLSHGIAIYERCPRPVEPLWVEGLS 286 (286)
Q Consensus 252 ii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~ga~ 286 (286)
+|+|++|..++.+.++.+.+..+. .++++++++|
T Consensus 239 vi~G~~D~~~~~~~~~~~~~~~~~-~~~~~i~~~g 272 (294)
T PLN02824 239 IAWGEKDPWEPVELGRAYANFDAV-EDFIVLPGVG 272 (294)
T ss_pred EEEecCCCCCChHHHHHHHhcCCc-cceEEeCCCC
Confidence 999999999999999887665544 4899999876
No 19
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.88 E-value=8.4e-22 Score=147.20 Aligned_cols=142 Identities=29% Similarity=0.511 Sum_probs=117.1
Q ss_pred EEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCCChhhHHHHHHHHHHHHHHHhCCCCCcEEEE
Q psy4394 93 TILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSEKNLYADIDAAWNTLRTRYGISPENIILY 172 (286)
Q Consensus 93 ~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~ 172 (286)
+||++||++++...+..+...++++ ||.|+.+|+ |++|.+.. ..+..++++++.+... +.++++++
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~~-G~~v~~~~~-----~~~~~~~~-------~~~~~~~~~~~~~~~~-~~~~i~l~ 66 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAEQ-GYAVVAFDY-----PGHGDSDG-------ADAVERVLADIRAGYP-DPDRIILI 66 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHHT-TEEEEEESC-----TTSTTSHH-------SHHHHHHHHHHHHHHC-TCCEEEEE
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHC-CCEEEEEec-----CCCCccch-------hHHHHHHHHHHHhhcC-CCCcEEEE
Confidence 5899999999988888888888865 999999999 99998622 2366667777655434 67899999
Q ss_pred EeecChHHHHHHHhhc-CccEEEEeCCCCcccccccccccccccccccchhhhcccccccccCCccccCCCCCCCCCCEE
Q psy4394 173 GQSIGTVPTIDLASRY-QVGAVILHSPLMSGMRVAFPRTKRTWFFDVFPRVIFANVKTPIMGLSTLENIDKVPKVTSPVL 251 (286)
Q Consensus 173 G~S~Gg~~a~~~a~~~-~i~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl 251 (286)
|||+||.+++.++.+. +++++|+++|+. ..+.+...+.|++
T Consensus 67 G~S~Gg~~a~~~~~~~~~v~~~v~~~~~~--------------------------------------~~~~~~~~~~pv~ 108 (145)
T PF12695_consen 67 GHSMGGAIAANLAARNPRVKAVVLLSPYP--------------------------------------DSEDLAKIRIPVL 108 (145)
T ss_dssp EETHHHHHHHHHHHHSTTESEEEEESESS--------------------------------------GCHHHTTTTSEEE
T ss_pred EEccCcHHHHHHhhhccceeEEEEecCcc--------------------------------------chhhhhccCCcEE
Confidence 9999999999999987 999999999832 1222345567999
Q ss_pred EEecCCCCccChhHHHHHHHHCCCCCCceEecCCC
Q psy4394 252 VIHGTEDEVIDLSHGIAIYERCPRPVEPLWVEGLS 286 (286)
Q Consensus 252 ii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~ga~ 286 (286)
+++|++|+.+++++.++++++++.++++++++|++
T Consensus 109 ~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~g~~ 143 (145)
T PF12695_consen 109 FIHGENDPLVPPEQVRRLYEALPGPKELYIIPGAG 143 (145)
T ss_dssp EEEETT-SSSHHHHHHHHHHHHCSSEEEEEETTS-
T ss_pred EEEECCCCcCCHHHHHHHHHHcCCCcEEEEeCCCc
Confidence 99999999999999999999999778999999985
No 20
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.87 E-value=5.2e-21 Score=160.48 Aligned_cols=199 Identities=13% Similarity=0.136 Sum_probs=121.2
Q ss_pred CCCEEEEEEEeecCCCCeEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCC-----ChhhHHH
Q psy4394 75 RGNRLACMFMKCSPNARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRP-----SEKNLYA 149 (286)
Q Consensus 75 ~g~~l~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~-----~~~~~~~ 149 (286)
+|.+....+....+...|+|||+||++++...|..++..|.+ .||+|+++|+ ||||.|.... +.....+
T Consensus 30 ~~~~~~i~y~~~G~~~~~~lvliHG~~~~~~~w~~~~~~L~~-~gy~vi~~Dl-----~G~G~S~~~~~~~~~~~~~~a~ 103 (302)
T PRK00870 30 DGGPLRMHYVDEGPADGPPVLLLHGEPSWSYLYRKMIPILAA-AGHRVIAPDL-----IGFGRSDKPTRREDYTYARHVE 103 (302)
T ss_pred CCceEEEEEEecCCCCCCEEEEECCCCCchhhHHHHHHHHHh-CCCEEEEECC-----CCCCCCCCCCCcccCCHHHHHH
Confidence 454443333322222357899999999988899999988874 3899999999 9999997532 2223333
Q ss_pred HHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc--CccEEEEeCCCCccccc--c--cc-------cccc----
Q psy4394 150 DIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY--QVGAVILHSPLMSGMRV--A--FP-------RTKR---- 212 (286)
Q Consensus 150 d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~~~~~~--~--~~-------~~~~---- 212 (286)
|+.+++ ++.++ ++++++|||+||.+|+.+|.++ .++++|++++....... . .. ....
T Consensus 104 ~l~~~l----~~l~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (302)
T PRK00870 104 WMRSWF----EQLDL--TDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPMPDAFWAWRAFSQYSPVLPVG 177 (302)
T ss_pred HHHHHH----HHcCC--CCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCccccchHHHhhhhcccccCchhhHH
Confidence 333333 33344 4899999999999999999988 89999999864321100 0 00 0000
Q ss_pred ccc----ccccchhhhcccc---------cc---cccCC-----------ccccCCCCCCCCCCEEEEecCCCCccChhH
Q psy4394 213 TWF----FDVFPRVIFANVK---------TP---IMGLS-----------TLENIDKVPKVTSPVLVIHGTEDEVIDLSH 265 (286)
Q Consensus 213 ~~~----~~~~~~~~~~~~~---------~~---~~~~~-----------~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~ 265 (286)
.+. ...+......... .. ...+. .......+.++++|+++|+|++|.++|.+.
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~ 257 (302)
T PRK00870 178 RLVNGGTVRDLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLERWDKPFLTAFSDSDPITGGGD 257 (302)
T ss_pred HHhhccccccCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhhcCCCceEEEecCCCCcccCch
Confidence 000 0000000000000 00 00000 000113457789999999999999999866
Q ss_pred HHHHHHHCCCCC--CceEecCCC
Q psy4394 266 GIAIYERCPRPV--EPLWVEGLS 286 (286)
Q Consensus 266 ~~~l~~~~~~~~--~~~~~~ga~ 286 (286)
+++.+.+++.. ++.+++++|
T Consensus 258 -~~~~~~~~~~~~~~~~~i~~~g 279 (302)
T PRK00870 258 -AILQKRIPGAAGQPHPTIKGAG 279 (302)
T ss_pred -HHHHhhcccccccceeeecCCC
Confidence 88888887652 378899875
No 21
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.87 E-value=9.2e-21 Score=157.38 Aligned_cols=184 Identities=18% Similarity=0.295 Sum_probs=115.0
Q ss_pred CCeEEEEecCCccccchhhHH---HHhhccccceeEEEeeccCcCCCCccCCCCCCCh-h---hHHHHHHHHHHHHHHHh
Q psy4394 90 ARFTILFSHGNAVDIGQMSSF---FTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSE-K---NLYADIDAAWNTLRTRY 162 (286)
Q Consensus 90 ~~p~vv~~HG~~~~~~~~~~~---~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~~-~---~~~~d~~~~~~~l~~~~ 162 (286)
..|.||++||++.+...|... +..+.+ .||+|+++|+ ||||.|+..... . ...+|+.++++ ..
T Consensus 29 ~~~~ivllHG~~~~~~~~~~~~~~~~~l~~-~~~~vi~~D~-----~G~G~S~~~~~~~~~~~~~~~~l~~~l~----~l 98 (282)
T TIGR03343 29 NGEAVIMLHGGGPGAGGWSNYYRNIGPFVD-AGYRVILKDS-----PGFNKSDAVVMDEQRGLVNARAVKGLMD----AL 98 (282)
T ss_pred CCCeEEEECCCCCchhhHHHHHHHHHHHHh-CCCEEEEECC-----CCCCCCCCCcCcccccchhHHHHHHHHH----Hc
Confidence 457799999998876666543 444543 3899999999 999999754211 1 12344444333 33
Q ss_pred CCCCCcEEEEEeecChHHHHHHHhhc--CccEEEEeCCCCccccccccc-----------cccc-------c-----ccc
Q psy4394 163 GISPENIILYGQSIGTVPTIDLASRY--QVGAVILHSPLMSGMRVAFPR-----------TKRT-------W-----FFD 217 (286)
Q Consensus 163 ~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~~~~~~~~~~-----------~~~~-------~-----~~~ 217 (286)
+ .++++++||||||.+++.++.++ +++++|+++|........... .... + ...
T Consensus 99 ~--~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (282)
T TIGR03343 99 D--IEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSYETLKQMLNVFLFDQ 176 (282)
T ss_pred C--CCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHHHHhcCCCHHHHHHHHhhCccCc
Confidence 4 34999999999999999999988 899999998753210000000 0000 0 000
Q ss_pred -ccchhhhc-c---ccc-c-----------cccCCccccCCCCCCCCCCEEEEecCCCCccChhHHHHHHHHCCCCCCce
Q psy4394 218 -VFPRVIFA-N---VKT-P-----------IMGLSTLENIDKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPRPVEPL 280 (286)
Q Consensus 218 -~~~~~~~~-~---~~~-~-----------~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~ 280 (286)
........ . ... . .......+....++++++|+|+++|++|.+++++.++++.+.+++. +++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~~~~~~~~~~~-~~~ 255 (282)
T TIGR03343 177 SLITEELLQGRWENIQRQPEHLKNFLISSQKAPLSTWDVTARLGEIKAKTLVTWGRDDRFVPLDHGLKLLWNMPDA-QLH 255 (282)
T ss_pred ccCcHHHHHhHHHHhhcCHHHHHHHHHhccccccccchHHHHHhhCCCCEEEEEccCCCcCCchhHHHHHHhCCCC-EEE
Confidence 00000000 0 000 0 0001111222346788999999999999999999999999998865 889
Q ss_pred EecCCC
Q psy4394 281 WVEGLS 286 (286)
Q Consensus 281 ~~~ga~ 286 (286)
+++++|
T Consensus 256 ~i~~ag 261 (282)
T TIGR03343 256 VFSRCG 261 (282)
T ss_pred EeCCCC
Confidence 999876
No 22
>PRK10115 protease 2; Provisional
Probab=99.87 E-value=6.2e-21 Score=174.62 Aligned_cols=215 Identities=15% Similarity=0.062 Sum_probs=154.0
Q ss_pred ccccEEEeccCCCEEEEEE-Eeec---CCCCeEEEEecCCccccc--hhhHHHHhhccccceeEEEeeccCcCCCCccCC
Q psy4394 65 NIEGFFTRTSRGNRLACMF-MKCS---PNARFTILFSHGNAVDIG--QMSSFFTGLGSRINCNIFSYDYSGYDYSGYGIS 138 (286)
Q Consensus 65 ~~~~~~~~~~~g~~l~~~~-~~~~---~~~~p~vv~~HG~~~~~~--~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s 138 (286)
..+.+++++.||.+|++++ ++|. +++.|+||++||+.+... .|......++. .||.|+.+++||+ -|+|+.
T Consensus 415 ~~e~v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~-rG~~v~~~n~RGs--~g~G~~ 491 (686)
T PRK10115 415 RSEHLWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLD-RGFVYAIVHVRGG--GELGQQ 491 (686)
T ss_pred EEEEEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHH-CCcEEEEEEcCCC--CccCHH
Confidence 6788899999999999854 4452 356799999999776542 35555566664 4999999999444 333322
Q ss_pred CCC----CChhhHHHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc--CccEEEEeCCCCcccccccc-ccc
Q psy4394 139 TGR----PSEKNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY--QVGAVILHSPLMSGMRVAFP-RTK 211 (286)
Q Consensus 139 ~~~----~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~~~~~~~~~-~~~ 211 (286)
-.. .......+|+.++++++.++..+++++++++|.|+||+++..++.++ .++++|+..|+.|....+.. ..+
T Consensus 492 w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~~~~~~~~~~p 571 (686)
T PRK10115 492 WYEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVVTTMLDESIP 571 (686)
T ss_pred HHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhHhhhcccCCCC
Confidence 111 12235578999999999999778999999999999999999998876 99999999999996654332 111
Q ss_pred ccccccccchhhhcccccc--cccCCccccCCCCCCCCCC-EEEEecCCCCccChhHHHHHHHHCCCC---CCceEe---
Q psy4394 212 RTWFFDVFPRVIFANVKTP--IMGLSTLENIDKVPKVTSP-VLVIHGTEDEVIDLSHGIAIYERCPRP---VEPLWV--- 282 (286)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~P-vlii~G~~D~~v~~~~~~~l~~~~~~~---~~~~~~--- 282 (286)
..+. .+.. .++...+ ...+..++++..+++++.| +|++||.+|..||+.++.+++.+++.. .+++++
T Consensus 572 ~~~~--~~~e--~G~p~~~~~~~~l~~~SP~~~v~~~~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~~~~~vl~~~~ 647 (686)
T PRK10115 572 LTTG--EFEE--WGNPQDPQYYEYMKSYSPYDNVTAQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDDHLLLLCTD 647 (686)
T ss_pred CChh--HHHH--hCCCCCHHHHHHHHHcCchhccCccCCCceeEEecCCCCCcCchHHHHHHHHHHhcCCCCceEEEEec
Confidence 1111 1111 1112211 2334567899999999999 667799999999999999999988542 566777
Q ss_pred cCCC
Q psy4394 283 EGLS 286 (286)
Q Consensus 283 ~ga~ 286 (286)
+++|
T Consensus 648 ~~~G 651 (686)
T PRK10115 648 MDSG 651 (686)
T ss_pred CCCC
Confidence 6654
No 23
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.86 E-value=1.9e-20 Score=158.47 Aligned_cols=208 Identities=19% Similarity=0.188 Sum_probs=133.4
Q ss_pred EeccCCCEEEEEEEeecCCCCeEEEEecCCccccch-h-------------------------hHHHHhhccccceeEEE
Q psy4394 71 TRTSRGNRLACMFMKCSPNARFTILFSHGNAVDIGQ-M-------------------------SSFFTGLGSRINCNIFS 124 (286)
Q Consensus 71 ~~~~~g~~l~~~~~~~~~~~~p~vv~~HG~~~~~~~-~-------------------------~~~~~~l~~~~g~~vi~ 124 (286)
+.+.||..|.++.+.|. +++.+|+++||.+++... + ..++..+. +.||+|++
T Consensus 2 ~~~~~g~~l~~~~~~~~-~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~-~~G~~V~~ 79 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIVK-NAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFN-KNGYSVYG 79 (332)
T ss_pred ccCCCCCeEEEeeeecc-CCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHH-HCCCcEEE
Confidence 45679999999988875 577899999999987741 1 24566666 45999999
Q ss_pred eeccCcCCCCccCCCCC-------CChhhHHHHHHHHHHHHHHHh-----------------CCC-CCcEEEEEeecChH
Q psy4394 125 YDYSGYDYSGYGISTGR-------PSEKNLYADIDAAWNTLRTRY-----------------GIS-PENIILYGQSIGTV 179 (286)
Q Consensus 125 ~d~~~~~~~G~G~s~~~-------~~~~~~~~d~~~~~~~l~~~~-----------------~~~-~~~i~l~G~S~Gg~ 179 (286)
+|+ ||||.|.+. .......+|+..+++.+++.. ... ..+++++||||||.
T Consensus 80 ~D~-----rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~ 154 (332)
T TIGR01607 80 LDL-----QGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGN 154 (332)
T ss_pred ecc-----cccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccH
Confidence 999 999998753 234556678888888776520 011 34899999999999
Q ss_pred HHHHHHhhc----------CccEEEEeCCCCcccccc---------------------cccccc---cccccccchhhhc
Q psy4394 180 PTIDLASRY----------QVGAVILHSPLMSGMRVA---------------------FPRTKR---TWFFDVFPRVIFA 225 (286)
Q Consensus 180 ~a~~~a~~~----------~i~~~v~~~p~~~~~~~~---------------------~~~~~~---~~~~~~~~~~~~~ 225 (286)
+++.++... .++++|+.+|........ .+.... .+.. ..+.....
T Consensus 155 i~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~-~~~~~~~~ 233 (332)
T TIGR01607 155 IALRLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTFRISKKIRYE-KSPYVNDI 233 (332)
T ss_pred HHHHHHHHhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCcccccCccccc-cChhhhhH
Confidence 999987542 488999888875321100 000000 0000 00000000
Q ss_pred cccccccc-----------C-Cccc-cCCCCCCC--CCCEEEEecCCCCccChhHHHHHHHHCCCC-CCceEecCCC
Q psy4394 226 NVKTPIMG-----------L-STLE-NIDKVPKV--TSPVLVIHGTEDEVIDLSHGIAIYERCPRP-VEPLWVEGLS 286 (286)
Q Consensus 226 ~~~~~~~~-----------~-~~~~-~~~~~~~i--~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~-~~~~~~~ga~ 286 (286)
...++... + .... ....+.++ ++|+|++||++|.+++++.++++++++... +++.+++|++
T Consensus 234 ~~~Dp~~~~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~~~~g~~ 310 (332)
T TIGR01607 234 IKFDKFRYDGGITFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELHTLEDMD 310 (332)
T ss_pred HhcCccccCCcccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCCcEEEEECCCC
Confidence 00000000 0 0000 01233444 689999999999999999999999887643 6888898864
No 24
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.85 E-value=9.3e-21 Score=155.03 Aligned_cols=184 Identities=14% Similarity=0.209 Sum_probs=121.0
Q ss_pred CCCeEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCCC--CChhhHHHHHHHHHHHHHHHhCCCC
Q psy4394 89 NARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGR--PSEKNLYADIDAAWNTLRTRYGISP 166 (286)
Q Consensus 89 ~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~--~~~~~~~~d~~~~~~~l~~~~~~~~ 166 (286)
..+|+||++||++++...|..++..+.+ +|+|+++|+ ||||.|... .+..++.+|+.++++++ +.
T Consensus 14 ~~~~~iv~lhG~~~~~~~~~~~~~~l~~--~~~vi~~D~-----~G~G~s~~~~~~~~~~~~~d~~~~l~~l----~~-- 80 (255)
T PRK10673 14 HNNSPIVLVHGLFGSLDNLGVLARDLVN--DHDIIQVDM-----RNHGLSPRDPVMNYPAMAQDLLDTLDAL----QI-- 80 (255)
T ss_pred CCCCCEEEECCCCCchhHHHHHHHHHhh--CCeEEEECC-----CCCCCCCCCCCCCHHHHHHHHHHHHHHc----CC--
Confidence 4678999999999988888888888864 799999999 999998754 23445556666666554 33
Q ss_pred CcEEEEEeecChHHHHHHHhhc--CccEEEEeCCC--Cccccc---cc---ccccc-c---------ccccccc-----h
Q psy4394 167 ENIILYGQSIGTVPTIDLASRY--QVGAVILHSPL--MSGMRV---AF---PRTKR-T---------WFFDVFP-----R 221 (286)
Q Consensus 167 ~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~--~~~~~~---~~---~~~~~-~---------~~~~~~~-----~ 221 (286)
++++++||||||.+++.+|.++ +|+++|++++. ...... .. ..... . .....+. .
T Consensus 81 ~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (255)
T PRK10673 81 EKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSEAGATTRQQAAAIMRQHLNEEGVIQ 160 (255)
T ss_pred CceEEEEECHHHHHHHHHHHhCHhhcceEEEEecCCCCccchhhHHHHHHHHHhhhcccccHHHHHHHHHHhcCCHHHHH
Confidence 4899999999999999999887 89999997532 110000 00 00000 0 0000000 0
Q ss_pred hhhccccccc---------ccCCccccCCCCCCCCCCEEEEecCCCCccChhHHHHHHHHCCCCCCceEecCCC
Q psy4394 222 VIFANVKTPI---------MGLSTLENIDKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPRPVEPLWVEGLS 286 (286)
Q Consensus 222 ~~~~~~~~~~---------~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~ga~ 286 (286)
.......... ..+........++++++|+|+|+|++|..++.+.++.+.+.+++. ++.+++|+|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~g 233 (255)
T PRK10673 161 FLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQFPQA-RAHVIAGAG 233 (255)
T ss_pred HHHhcCCcceeEeeHHHHHHhHHHHhCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhCCCc-EEEEeCCCC
Confidence 0000000000 001111122345677899999999999999999999998888776 788898875
No 25
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.85 E-value=1.4e-21 Score=162.97 Aligned_cols=215 Identities=18% Similarity=0.186 Sum_probs=141.6
Q ss_pred ccccEEEeccCCCEEEEEEEeec--CCCCeEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCCC-
Q psy4394 65 NIEGFFTRTSRGNRLACMFMKCS--PNARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGR- 141 (286)
Q Consensus 65 ~~~~~~~~~~~g~~l~~~~~~~~--~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~- 141 (286)
.+.++.+.+.+|..+.++++.|. +++.|.||.+||.++....+...+. ++ ..||.|+.+|. ||.|.....
T Consensus 55 ~vy~v~f~s~~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~~~~~~~-~a-~~G~~vl~~d~-----rGqg~~~~d~ 127 (320)
T PF05448_consen 55 EVYDVSFESFDGSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSGDPFDLLP-WA-AAGYAVLAMDV-----RGQGGRSPDY 127 (320)
T ss_dssp EEEEEEEEEGGGEEEEEEEEEES-SSSSEEEEEEE--TT--GGGHHHHHH-HH-HTT-EEEEE-------TTTSSSS-B-
T ss_pred EEEEEEEEccCCCEEEEEEEecCCCCCCcCEEEEecCCCCCCCCcccccc-cc-cCCeEEEEecC-----CCCCCCCCCc
Confidence 45678888889999999999996 4567999999999987666655544 33 44999999999 777722110
Q ss_pred ----------------CC------hhhHHHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc-CccEEEEeCC
Q psy4394 142 ----------------PS------EKNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY-QVGAVILHSP 198 (286)
Q Consensus 142 ----------------~~------~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-~i~~~v~~~p 198 (286)
.. ...++.|+..+++++.....+|+++|++.|.|+||.+++.+|+.. +|+++++..|
T Consensus 128 ~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~rv~~~~~~vP 207 (320)
T PF05448_consen 128 RGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDPRVKAAAADVP 207 (320)
T ss_dssp SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSST-SEEEEESE
T ss_pred cccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCccccEEEecCC
Confidence 01 123458999999999999999999999999999999999999988 9999999999
Q ss_pred CCcccccccccccccccccccchhhh---c---ccccccccCCccccCCCCCCCCCCEEEEecCCCCccChhHHHHHHHH
Q psy4394 199 LMSGMRVAFPRTKRTWFFDVFPRVIF---A---NVKTPIMGLSTLENIDKVPKVTSPVLVIHGTEDEVIDLSHGIAIYER 272 (286)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~ 272 (286)
+..-+...+...........+...+. . .....+..+.-++..+.++++++|+++-.|-.|+++|++.....+++
T Consensus 208 ~l~d~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~v~~~L~Y~D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~ 287 (320)
T PF05448_consen 208 FLCDFRRALELRADEGPYPEIRRYFRWRDPHHEREPEVFETLSYFDAVNFARRIKCPVLFSVGLQDPVCPPSTQFAAYNA 287 (320)
T ss_dssp SSSSHHHHHHHT--STTTHHHHHHHHHHSCTHCHHHHHHHHHHTT-HHHHGGG--SEEEEEEETT-SSS-HHHHHHHHCC
T ss_pred CccchhhhhhcCCccccHHHHHHHHhccCCCcccHHHHHHHHhhhhHHHHHHHcCCCEEEEEecCCCCCCchhHHHHHhc
Confidence 87644332221110111111111111 0 00111122334455667788999999999999999999999999999
Q ss_pred CCCCCCceEecCCC
Q psy4394 273 CPRPVEPLWVEGLS 286 (286)
Q Consensus 273 ~~~~~~~~~~~ga~ 286 (286)
++..|++.++|..|
T Consensus 288 i~~~K~l~vyp~~~ 301 (320)
T PF05448_consen 288 IPGPKELVVYPEYG 301 (320)
T ss_dssp --SSEEEEEETT--
T ss_pred cCCCeeEEeccCcC
Confidence 99999999998754
No 26
>PLN02511 hydrolase
Probab=99.85 E-value=5e-20 Score=159.01 Aligned_cols=212 Identities=12% Similarity=0.123 Sum_probs=135.9
Q ss_pred cccEEEeccCCCEEEEEEEee----cCCCCeEEEEecCCccccch-hh-HHHHhhccccceeEEEeeccCcCCCCccCCC
Q psy4394 66 IEGFFTRTSRGNRLACMFMKC----SPNARFTILFSHGNAVDIGQ-MS-SFFTGLGSRINCNIFSYDYSGYDYSGYGIST 139 (286)
Q Consensus 66 ~~~~~~~~~~g~~l~~~~~~~----~~~~~p~vv~~HG~~~~~~~-~~-~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~ 139 (286)
.++..+.+.||..+...++.+ .+..+|+||++||++++... |. .....+. +.||+|+++|+ ||||.|.
T Consensus 71 ~~re~l~~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~-~~g~~vv~~d~-----rG~G~s~ 144 (388)
T PLN02511 71 YRRECLRTPDGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLLRAR-SKGWRVVVFNS-----RGCADSP 144 (388)
T ss_pred eeEEEEECCCCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHHHHH-HCCCEEEEEec-----CCCCCCC
Confidence 344567788999888766542 22457899999998765533 43 3444444 45999999999 9999987
Q ss_pred CC---CChhhHHHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc--C--ccEEEEeCCCCcccccc--ccc-
Q psy4394 140 GR---PSEKNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY--Q--VGAVILHSPLMSGMRVA--FPR- 209 (286)
Q Consensus 140 ~~---~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~--i~~~v~~~p~~~~~~~~--~~~- 209 (286)
.. .......+|+.++++++..++. ..+++++||||||.+++.++.++ + +++++++++..+..... +..
T Consensus 145 ~~~~~~~~~~~~~Dl~~~i~~l~~~~~--~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~~~~~~~ 222 (388)
T PLN02511 145 VTTPQFYSASFTGDLRQVVDHVAGRYP--SANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIADEDFHKG 222 (388)
T ss_pred CCCcCEEcCCchHHHHHHHHHHHHHCC--CCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHHHHHhcc
Confidence 43 1234667899999999998763 35899999999999999999887 3 78888877655421000 000
Q ss_pred --------ccccc---cc----------cccchh----------hhcccccccccC-------CccccCCCCCCCCCCEE
Q psy4394 210 --------TKRTW---FF----------DVFPRV----------IFANVKTPIMGL-------STLENIDKVPKVTSPVL 251 (286)
Q Consensus 210 --------~~~~~---~~----------~~~~~~----------~~~~~~~~~~~~-------~~~~~~~~~~~i~~Pvl 251 (286)
+...+ .. ..+... +..........+ ...+....++++++|+|
T Consensus 223 ~~~~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~gf~~~~~yy~~~s~~~~L~~I~vPtL 302 (388)
T PLN02511 223 FNNVYDKALAKALRKIFAKHALLFEGLGGEYNIPLVANAKTVRDFDDGLTRVSFGFKSVDAYYSNSSSSDSIKHVRVPLL 302 (388)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCHHHHHhCCCHHHHHHhhhhhcCCCCCHHHHHHHcCchhhhccCCCCeE
Confidence 00000 00 000000 000000000111 12234567888999999
Q ss_pred EEecCCCCccChhHH-HHHHHHCCCCCCceEecCCC
Q psy4394 252 VIHGTEDEVIDLSHG-IAIYERCPRPVEPLWVEGLS 286 (286)
Q Consensus 252 ii~G~~D~~v~~~~~-~~l~~~~~~~~~~~~~~ga~ 286 (286)
+|+|++|+++|.+.. ....+..++. ++++++++|
T Consensus 303 iI~g~dDpi~p~~~~~~~~~~~~p~~-~l~~~~~gG 337 (388)
T PLN02511 303 CIQAANDPIAPARGIPREDIKANPNC-LLIVTPSGG 337 (388)
T ss_pred EEEcCCCCcCCcccCcHhHHhcCCCE-EEEECCCcc
Confidence 999999999998755 3455555554 788888775
No 27
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.85 E-value=2.5e-20 Score=162.63 Aligned_cols=206 Identities=17% Similarity=0.301 Sum_probs=127.5
Q ss_pred ccCCCEEEEEEEeecC-CCCeEEEEecCCccccchhhHH-HHhhcc--ccceeEEEeeccCcCCCCccCCCCCCChhhHH
Q psy4394 73 TSRGNRLACMFMKCSP-NARFTILFSHGNAVDIGQMSSF-FTGLGS--RINCNIFSYDYSGYDYSGYGISTGRPSEKNLY 148 (286)
Q Consensus 73 ~~~g~~l~~~~~~~~~-~~~p~vv~~HG~~~~~~~~~~~-~~~l~~--~~g~~vi~~d~~~~~~~G~G~s~~~~~~~~~~ 148 (286)
+.+|.++++....|.+ ..+|.||++||++++...|... +..+.+ +.+|+|+++|+ ||||.|+.........
T Consensus 182 ~~~~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl-----~G~G~S~~p~~~~ytl 256 (481)
T PLN03087 182 SSSNESLFVHVQQPKDNKAKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDL-----LGFGRSPKPADSLYTL 256 (481)
T ss_pred eeCCeEEEEEEecCCCCCCCCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECC-----CCCCCCcCCCCCcCCH
Confidence 3455788888776643 3468899999999988877753 344432 24899999999 9999987542211112
Q ss_pred HHHHHHH-HHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc--CccEEEEeCCCCcccccc-------ccc--ccc----
Q psy4394 149 ADIDAAW-NTLRTRYGISPENIILYGQSIGTVPTIDLASRY--QVGAVILHSPLMSGMRVA-------FPR--TKR---- 212 (286)
Q Consensus 149 ~d~~~~~-~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~~~~~~~-------~~~--~~~---- 212 (286)
++..+.+ +.+.+..+++ +++++||||||.+++.+|.++ +++++|+++|........ ... ...
T Consensus 257 ~~~a~~l~~~ll~~lg~~--k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (481)
T PLN03087 257 REHLEMIERSVLERYKVK--SFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKGVQATQYVMRKVAPRRVWPP 334 (481)
T ss_pred HHHHHHHHHHHHHHcCCC--CEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccccchhHHHHHHHHhcccccCCc
Confidence 3333333 3445555544 999999999999999999988 899999998643211000 000 000
Q ss_pred --------cccc---ccc----------chhhhcccccc-ccc-C----------Cc--------------cc-cCC-CC
Q psy4394 213 --------TWFF---DVF----------PRVIFANVKTP-IMG-L----------ST--------------LE-NID-KV 243 (286)
Q Consensus 213 --------~~~~---~~~----------~~~~~~~~~~~-~~~-~----------~~--------------~~-~~~-~~ 243 (286)
.|.. ... ........... ... . .. .+ ... ..
T Consensus 335 ~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~l~~l~ 414 (481)
T PLN03087 335 IAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICGSGSKLDGYLDHVR 414 (481)
T ss_pred cccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHHhchhhhhhhHHHHHH
Confidence 0000 000 00000000000 000 0 00 00 001 11
Q ss_pred CCCCCCEEEEecCCCCccChhHHHHHHHHCCCCCCceEecCCC
Q psy4394 244 PKVTSPVLVIHGTEDEVIDLSHGIAIYERCPRPVEPLWVEGLS 286 (286)
Q Consensus 244 ~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~ga~ 286 (286)
+++++|+|+++|++|.++|++.++.+.+.+++. ++++++++|
T Consensus 415 ~~I~vPtLII~Ge~D~ivP~~~~~~la~~iP~a-~l~vI~~aG 456 (481)
T PLN03087 415 DQLKCDVAIFHGGDDELIPVECSYAVKAKVPRA-RVKVIDDKD 456 (481)
T ss_pred HhCCCCEEEEEECCCCCCCHHHHHHHHHhCCCC-EEEEeCCCC
Confidence 258899999999999999999999999999876 899999986
No 28
>PRK10985 putative hydrolase; Provisional
Probab=99.85 E-value=1.3e-20 Score=159.42 Aligned_cols=209 Identities=12% Similarity=0.099 Sum_probs=131.8
Q ss_pred EEEeccCCCEEEEEEEe-e-cCCCCeEEEEecCCccccch--hhHHHHhhccccceeEEEeeccCcCCCCccCCCCCC--
Q psy4394 69 FFTRTSRGNRLACMFMK-C-SPNARFTILFSHGNAVDIGQ--MSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRP-- 142 (286)
Q Consensus 69 ~~~~~~~g~~l~~~~~~-~-~~~~~p~vv~~HG~~~~~~~--~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~-- 142 (286)
..+++.||..+...+.. + .+.++|+||++||++++... ...++..+. +.||+|+++|+ ||+|.+....
T Consensus 34 ~~~~~~dg~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~~~l~-~~G~~v~~~d~-----rG~g~~~~~~~~ 107 (324)
T PRK10985 34 QRLELPDGDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLLEAAQ-KRGWLGVVMHF-----RGCSGEPNRLHR 107 (324)
T ss_pred eEEECCCCCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHHHHHH-HCCCEEEEEeC-----CCCCCCccCCcc
Confidence 34567888877655442 2 22357899999999876433 334556665 55999999999 9998765331
Q ss_pred -ChhhHHHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc----CccEEEEeCCCCcccccccc--c----cc
Q psy4394 143 -SEKNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY----QVGAVILHSPLMSGMRVAFP--R----TK 211 (286)
Q Consensus 143 -~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~----~i~~~v~~~p~~~~~~~~~~--~----~~ 211 (286)
......+|+.+++++++++++. .+++++||||||.+++.++.++ .++++|++++..+....... . ..
T Consensus 108 ~~~~~~~~D~~~~i~~l~~~~~~--~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~~~~~~~~~~~ 185 (324)
T PRK10985 108 IYHSGETEDARFFLRWLQREFGH--VPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSYRMEQGFSRVY 185 (324)
T ss_pred eECCCchHHHHHHHHHHHHhCCC--CCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHHHHhhhHHHHH
Confidence 1234568999999999988653 4899999999999888877765 38888888877552211000 0 00
Q ss_pred cccc---------------ccc--cch-hhhc---------cccccccc-------CCccccCCCCCCCCCCEEEEecCC
Q psy4394 212 RTWF---------------FDV--FPR-VIFA---------NVKTPIMG-------LSTLENIDKVPKVTSPVLVIHGTE 257 (286)
Q Consensus 212 ~~~~---------------~~~--~~~-~~~~---------~~~~~~~~-------~~~~~~~~~~~~i~~Pvlii~G~~ 257 (286)
...+ ... ... .... ........ +...+....++++++|+++|+|++
T Consensus 186 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~~y~~~~~~~~l~~i~~P~lii~g~~ 265 (324)
T PRK10985 186 QRYLLNLLKANAARKLAAYPGTLPINLAQLKSVRRLREFDDLITARIHGFADAIDYYRQCSALPLLNQIRKPTLIIHAKD 265 (324)
T ss_pred HHHHHHHHHHHHHHHHHhccccccCCHHHHhcCCcHHHHhhhheeccCCCCCHHHHHHHCChHHHHhCCCCCEEEEecCC
Confidence 0000 000 000 0000 00001001 112233456688899999999999
Q ss_pred CCccChhHHHHHHHHCCCCCCceEecCCC
Q psy4394 258 DEVIDLSHGIAIYERCPRPVEPLWVEGLS 286 (286)
Q Consensus 258 D~~v~~~~~~~l~~~~~~~~~~~~~~ga~ 286 (286)
|++++.+....+.+..++ .++++++++|
T Consensus 266 D~~~~~~~~~~~~~~~~~-~~~~~~~~~G 293 (324)
T PRK10985 266 DPFMTHEVIPKPESLPPN-VEYQLTEHGG 293 (324)
T ss_pred CCCCChhhChHHHHhCCC-eEEEECCCCC
Confidence 999999887777555544 4677777765
No 29
>PLN02965 Probable pheophorbidase
Probab=99.85 E-value=4.2e-20 Score=151.26 Aligned_cols=183 Identities=18% Similarity=0.243 Sum_probs=118.4
Q ss_pred eEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCC----ChhhHHHHHHHHHHHHHHHhCCCCC
Q psy4394 92 FTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRP----SEKNLYADIDAAWNTLRTRYGISPE 167 (286)
Q Consensus 92 p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~----~~~~~~~d~~~~~~~l~~~~~~~~~ 167 (286)
-+|||+||++.+...|...+..|.+. ||+|+++|+ ||||.|.... +...+.+|+.++++.+ +. .+
T Consensus 4 ~~vvllHG~~~~~~~w~~~~~~L~~~-~~~via~Dl-----~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l----~~-~~ 72 (255)
T PLN02965 4 IHFVFVHGASHGAWCWYKLATLLDAA-GFKSTCVDL-----TGAGISLTDSNTVSSSDQYNRPLFALLSDL----PP-DH 72 (255)
T ss_pred eEEEEECCCCCCcCcHHHHHHHHhhC-CceEEEecC-----CcCCCCCCCccccCCHHHHHHHHHHHHHhc----CC-CC
Confidence 35999999999888899888888633 899999999 9999997432 2334445555555443 22 14
Q ss_pred cEEEEEeecChHHHHHHHhhc--CccEEEEeCCCCc--c---cccc---ccccccccc-------ccc-----cch-hh-
Q psy4394 168 NIILYGQSIGTVPTIDLASRY--QVGAVILHSPLMS--G---MRVA---FPRTKRTWF-------FDV-----FPR-VI- 223 (286)
Q Consensus 168 ~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~~--~---~~~~---~~~~~~~~~-------~~~-----~~~-~~- 223 (286)
+++++||||||.+++.++.++ +|+++|++++... . .... .......+. ... ... ..
T Consensus 73 ~~~lvGhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (255)
T PLN02965 73 KVILVGHSIGGGSVTEALCKFTDKISMAIYVAAAMVKPGSIISPRLKNVMEGTEKIWDYTFGEGPDKPPTGIMMKPEFVR 152 (255)
T ss_pred CEEEEecCcchHHHHHHHHhCchheeEEEEEccccCCCCCCccHHHHhhhhccccceeeeeccCCCCCcchhhcCHHHHH
Confidence 999999999999999999987 9999999886521 0 0000 000000000 000 000 00
Q ss_pred ---hcccc-------------cccccCCccc-cCCCCCCCCCCEEEEecCCCCccChhHHHHHHHHCCCCCCceEecCCC
Q psy4394 224 ---FANVK-------------TPIMGLSTLE-NIDKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPRPVEPLWVEGLS 286 (286)
Q Consensus 224 ---~~~~~-------------~~~~~~~~~~-~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~ga~ 286 (286)
..... .......... ....+.++++|+++++|++|..+|++.++.+.+.+++. ++++++|+|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~~a-~~~~i~~~G 231 (255)
T PLN02965 153 HYYYNQSPLEDYTLSSKLLRPAPVRAFQDLDKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENWPPA-QTYVLEDSD 231 (255)
T ss_pred HHHhcCCCHHHHHHHHHhcCCCCCcchhhhhhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhCCcc-eEEEecCCC
Confidence 00000 0000000000 11133468999999999999999999999999999887 788898876
No 30
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.84 E-value=2e-19 Score=149.51 Aligned_cols=121 Identities=17% Similarity=0.229 Sum_probs=90.8
Q ss_pred cccEEEeccCCCEEEEEEEeecCCCCeEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCCChh
Q psy4394 66 IEGFFTRTSRGNRLACMFMKCSPNARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSEK 145 (286)
Q Consensus 66 ~~~~~~~~~~g~~l~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~~~ 145 (286)
.+...++. +|.++++... +..|+|||+||++.+...|...+..+.+ +|+|+++|+ ||||.|+......
T Consensus 14 ~~~~~~~~-~~~~i~y~~~----G~~~~iv~lHG~~~~~~~~~~~~~~l~~--~~~vi~~D~-----~G~G~S~~~~~~~ 81 (286)
T PRK03204 14 FESRWFDS-SRGRIHYIDE----GTGPPILLCHGNPTWSFLYRDIIVALRD--RFRCVAPDY-----LGFGLSERPSGFG 81 (286)
T ss_pred ccceEEEc-CCcEEEEEEC----CCCCEEEEECCCCccHHHHHHHHHHHhC--CcEEEEECC-----CCCCCCCCCCccc
Confidence 34445544 6677765543 2457899999998877778888887764 699999999 9999997543322
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc--CccEEEEeCCCC
Q psy4394 146 NLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY--QVGAVILHSPLM 200 (286)
Q Consensus 146 ~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~ 200 (286)
...++..+.+..+.++.++ ++++++||||||.+++.++..+ +++++|++++..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~--~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~ 136 (286)
T PRK03204 82 YQIDEHARVIGEFVDHLGL--DRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWF 136 (286)
T ss_pred cCHHHHHHHHHHHHHHhCC--CCEEEEEECccHHHHHHHHHhChhheeEEEEECccc
Confidence 3346666666666666654 4899999999999999999887 999999887643
No 31
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.84 E-value=1.2e-20 Score=154.47 Aligned_cols=180 Identities=19% Similarity=0.230 Sum_probs=117.1
Q ss_pred CeEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCCChhhHHHHHHHHHHHHHHHhCCCCCcEE
Q psy4394 91 RFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSEKNLYADIDAAWNTLRTRYGISPENII 170 (286)
Q Consensus 91 ~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~ 170 (286)
.|.||++||++++...|..++..+.+ .|+|+++|+ ||||.|.... .... + ++++.+.+. . .++++
T Consensus 13 ~~~ivllHG~~~~~~~w~~~~~~L~~--~~~vi~~Dl-----~G~G~S~~~~-~~~~-~---~~~~~l~~~-~--~~~~~ 77 (256)
T PRK10349 13 NVHLVLLHGWGLNAEVWRCIDEELSS--HFTLHLVDL-----PGFGRSRGFG-ALSL-A---DMAEAVLQQ-A--PDKAI 77 (256)
T ss_pred CCeEEEECCCCCChhHHHHHHHHHhc--CCEEEEecC-----CCCCCCCCCC-CCCH-H---HHHHHHHhc-C--CCCeE
Confidence 35699999999999999998888864 699999999 9999987542 1122 2 223333332 3 35999
Q ss_pred EEEeecChHHHHHHHhhc--CccEEEEeCCCCccccc-ccccccccc-------ccc----ccchhhh----c-c-----
Q psy4394 171 LYGQSIGTVPTIDLASRY--QVGAVILHSPLMSGMRV-AFPRTKRTW-------FFD----VFPRVIF----A-N----- 226 (286)
Q Consensus 171 l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~~~~~~-~~~~~~~~~-------~~~----~~~~~~~----~-~----- 226 (286)
++||||||.+|+.+|.++ +++++|++++....... ........+ ... ....... . .
T Consensus 78 lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (256)
T PRK10349 78 WLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQTMGTETARQD 157 (256)
T ss_pred EEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHHHHHccCchHHHH
Confidence 999999999999999887 99999998764221000 000000000 000 0000000 0 0
Q ss_pred -------c-cccc----------ccCCccccCCCCCCCCCCEEEEecCCCCccChhHHHHHHHHCCCCCCceEecCCC
Q psy4394 227 -------V-KTPI----------MGLSTLENIDKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPRPVEPLWVEGLS 286 (286)
Q Consensus 227 -------~-~~~~----------~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~ga~ 286 (286)
. .... ..+...+..+.+.++++|+|+++|++|.++|.+.++.+.+.+++. ++++++++|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i~~~-~~~~i~~~g 234 (256)
T PRK10349 158 ARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHS-ESYIFAKAA 234 (256)
T ss_pred HHHHHHHhhccCCCcHHHHHHHHHHHHhCccHHHHhhcCCCeEEEecCCCccCCHHHHHHHHHhCCCC-eEEEeCCCC
Confidence 0 0000 000112223456788999999999999999999998888888776 899999886
No 32
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.84 E-value=7.1e-21 Score=148.34 Aligned_cols=210 Identities=18% Similarity=0.159 Sum_probs=156.5
Q ss_pred cccEEEeccCCCEEEEEEEeec--CCCCeEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCCC--
Q psy4394 66 IEGFFTRTSRGNRLACMFMKCS--PNARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGR-- 141 (286)
Q Consensus 66 ~~~~~~~~~~g~~l~~~~~~~~--~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~-- 141 (286)
.-+++++..+|.+|.+|+..|. .++.|.||-+||+++..+.|..++..-+ .||.|+.+|. ||.|.+...
T Consensus 56 ~ydvTf~g~~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g~~~~~l~wa~--~Gyavf~Mdv-----RGQg~~~~dt~ 128 (321)
T COG3458 56 VYDVTFTGYGGARIKGWLVLPRHEKGKLPAVVQFHGYGGRGGEWHDMLHWAV--AGYAVFVMDV-----RGQGSSSQDTA 128 (321)
T ss_pred EEEEEEeccCCceEEEEEEeecccCCccceEEEEeeccCCCCCccccccccc--cceeEEEEec-----ccCCCccccCC
Confidence 3456777889999999999984 3578999999999998888877776544 3999999999 998877321
Q ss_pred -----CC-----------------hhhHHHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc-CccEEEEeCC
Q psy4394 142 -----PS-----------------EKNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY-QVGAVILHSP 198 (286)
Q Consensus 142 -----~~-----------------~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-~i~~~v~~~p 198 (286)
++ ..+...|+..+++-+.....+|.+||.+.|.|+||.+++.++... +++++++..|
T Consensus 129 ~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~rik~~~~~~P 208 (321)
T COG3458 129 DPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDPRIKAVVADYP 208 (321)
T ss_pred CCCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcChhhhccccccc
Confidence 01 123457999999999998889999999999999999999999988 9999999999
Q ss_pred CCcccccccccccccccccccchhhhc---ccccccccCCccccCCCCCCCCCCEEEEecCCCCccChhHHHHHHHHCCC
Q psy4394 199 LMSGMRVAFPRTKRTWFFDVFPRVIFA---NVKTPIMGLSTLENIDKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPR 275 (286)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~ 275 (286)
+.+-+..........-... +...+.. .....+..+.-++..+.+.+++.|+|+..|-.|+++|+.-.-.+++++..
T Consensus 209 fl~df~r~i~~~~~~~yde-i~~y~k~h~~~e~~v~~TL~yfD~~n~A~RiK~pvL~svgL~D~vcpPstqFA~yN~l~~ 287 (321)
T COG3458 209 FLSDFPRAIELATEGPYDE-IQTYFKRHDPKEAEVFETLSYFDIVNLAARIKVPVLMSVGLMDPVCPPSTQFAAYNALTT 287 (321)
T ss_pred ccccchhheeecccCcHHH-HHHHHHhcCchHHHHHHHHhhhhhhhHHHhhccceEEeecccCCCCCChhhHHHhhcccC
Confidence 9875544433321111110 0001000 01111223334445566788999999999999999999999999999999
Q ss_pred CCCceEec
Q psy4394 276 PVEPLWVE 283 (286)
Q Consensus 276 ~~~~~~~~ 283 (286)
.|++.+++
T Consensus 288 ~K~i~iy~ 295 (321)
T COG3458 288 SKTIEIYP 295 (321)
T ss_pred CceEEEee
Confidence 88777776
No 33
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.84 E-value=1.6e-20 Score=152.37 Aligned_cols=183 Identities=19% Similarity=0.281 Sum_probs=117.9
Q ss_pred CCeEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCCC---hhhHHHHHHHHHHHHHHHhCCCC
Q psy4394 90 ARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPS---EKNLYADIDAAWNTLRTRYGISP 166 (286)
Q Consensus 90 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~---~~~~~~d~~~~~~~l~~~~~~~~ 166 (286)
.+|+||++||.+.+...|..++..+.. ||+|+++|+ ||+|.|..... ...+.+|+.++++ ..+ .
T Consensus 12 ~~~~li~~hg~~~~~~~~~~~~~~l~~--~~~v~~~d~-----~G~G~s~~~~~~~~~~~~~~~~~~~i~----~~~--~ 78 (251)
T TIGR02427 12 GAPVLVFINSLGTDLRMWDPVLPALTP--DFRVLRYDK-----RGHGLSDAPEGPYSIEDLADDVLALLD----HLG--I 78 (251)
T ss_pred CCCeEEEEcCcccchhhHHHHHHHhhc--ccEEEEecC-----CCCCCCCCCCCCCCHHHHHHHHHHHHH----HhC--C
Confidence 568999999999988888888887753 899999999 99999865432 2333344443333 333 3
Q ss_pred CcEEEEEeecChHHHHHHHhhc--CccEEEEeCCCCccccc--ccc---ccc------------ccccccccc----h--
Q psy4394 167 ENIILYGQSIGTVPTIDLASRY--QVGAVILHSPLMSGMRV--AFP---RTK------------RTWFFDVFP----R-- 221 (286)
Q Consensus 167 ~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~~~~~~--~~~---~~~------------~~~~~~~~~----~-- 221 (286)
++++++|||+||.+++.+|.++ .++++|++++....... ... ... ..++...+. .
T Consensus 79 ~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (251)
T TIGR02427 79 ERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNARIAAVRAEGLAALADAVLERWFTPGFREAHPARL 158 (251)
T ss_pred CceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchhhHHHHHhhhhhccHHHHHHHHHHHHcccccccCChHHH
Confidence 4899999999999999999887 88998888764321100 000 000 000000000 0
Q ss_pred -hhhccc-ccc-------cccCCccccCCCCCCCCCCEEEEecCCCCccChhHHHHHHHHCCCCCCceEecCCC
Q psy4394 222 -VIFANV-KTP-------IMGLSTLENIDKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPRPVEPLWVEGLS 286 (286)
Q Consensus 222 -~~~~~~-~~~-------~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~ga~ 286 (286)
...... ... ...+...+..+.++++++|+++++|++|..+|.+..+.+.+.+++. ++++++++|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~g 231 (251)
T TIGR02427 159 DLYRNMLVRQPPDGYAGCCAAIRDADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLVPGA-RFAEIRGAG 231 (251)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHhcccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhCCCc-eEEEECCCC
Confidence 000000 000 0001112223446678899999999999999999999999988765 788898765
No 34
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.84 E-value=1.6e-19 Score=151.03 Aligned_cols=110 Identities=21% Similarity=0.309 Sum_probs=85.7
Q ss_pred ccCCCEEEEEEEeecCCCCeEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCC---ChhhHHH
Q psy4394 73 TSRGNRLACMFMKCSPNARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRP---SEKNLYA 149 (286)
Q Consensus 73 ~~~g~~l~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~---~~~~~~~ 149 (286)
+.+|.++.+.... ..+.||++||++++...|...+..+++. ++|+++|+ ||||.|+... +...+.+
T Consensus 13 ~~~g~~i~y~~~G----~g~~vvllHG~~~~~~~w~~~~~~L~~~--~~via~D~-----~G~G~S~~~~~~~~~~~~a~ 81 (295)
T PRK03592 13 EVLGSRMAYIETG----EGDPIVFLHGNPTSSYLWRNIIPHLAGL--GRCLAPDL-----IGMGASDKPDIDYTFADHAR 81 (295)
T ss_pred EECCEEEEEEEeC----CCCEEEEECCCCCCHHHHHHHHHHHhhC--CEEEEEcC-----CCCCCCCCCCCCCCHHHHHH
Confidence 3478777776542 3478999999999999999999988754 59999999 9999997543 2333344
Q ss_pred HHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc--CccEEEEeCCC
Q psy4394 150 DIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY--QVGAVILHSPL 199 (286)
Q Consensus 150 d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~ 199 (286)
|+.++++. .++ ++++++|||+||.+|+.++.++ +++++|++++.
T Consensus 82 dl~~ll~~----l~~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~ 127 (295)
T PRK03592 82 YLDAWFDA----LGL--DDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAI 127 (295)
T ss_pred HHHHHHHH----hCC--CCeEEEEECHHHHHHHHHHHhChhheeEEEEECCC
Confidence 44444443 343 4999999999999999999998 89999999874
No 35
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.84 E-value=4.6e-20 Score=158.07 Aligned_cols=113 Identities=19% Similarity=0.254 Sum_probs=82.1
Q ss_pred CCC-EEEEEEEeec--CCCCeEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCCC----hhhH
Q psy4394 75 RGN-RLACMFMKCS--PNARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPS----EKNL 147 (286)
Q Consensus 75 ~g~-~l~~~~~~~~--~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~----~~~~ 147 (286)
+|. ++++....+. ....|+||++||++++...|..++..+.+ +|+|+++|+ ||||.|+.... ...+
T Consensus 69 ~g~~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~w~~~~~~L~~--~~~via~Dl-----~G~G~S~~~~~~~~~~~~~ 141 (360)
T PLN02679 69 KGEYSINYLVKGSPEVTSSGPPVLLVHGFGASIPHWRRNIGVLAK--NYTVYAIDL-----LGFGASDKPPGFSYTMETW 141 (360)
T ss_pred CCceeEEEEEecCcccCCCCCeEEEECCCCCCHHHHHHHHHHHhc--CCEEEEECC-----CCCCCCCCCCCccccHHHH
Confidence 344 6666544321 01347899999999999999999988864 799999999 99999975432 2333
Q ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhh-c--CccEEEEeCCCC
Q psy4394 148 YADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASR-Y--QVGAVILHSPLM 200 (286)
Q Consensus 148 ~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~-~--~i~~~v~~~p~~ 200 (286)
.+|+.++++ ..++ ++++|+||||||.+++.++.. + +|+++|++++..
T Consensus 142 a~~l~~~l~----~l~~--~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~ 191 (360)
T PLN02679 142 AELILDFLE----EVVQ--KPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAG 191 (360)
T ss_pred HHHHHHHHH----HhcC--CCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCcc
Confidence 344444443 3343 499999999999999988864 3 899999998753
No 36
>PRK06489 hypothetical protein; Provisional
Probab=99.83 E-value=4e-20 Score=158.64 Aligned_cols=202 Identities=17% Similarity=0.192 Sum_probs=121.7
Q ss_pred cCCCEEEEEEEeecCCC-------CeEEEEecCCccccchhh--HHHHhhcc------ccceeEEEeeccCcCCCCccCC
Q psy4394 74 SRGNRLACMFMKCSPNA-------RFTILFSHGNAVDIGQMS--SFFTGLGS------RINCNIFSYDYSGYDYSGYGIS 138 (286)
Q Consensus 74 ~~g~~l~~~~~~~~~~~-------~p~vv~~HG~~~~~~~~~--~~~~~l~~------~~g~~vi~~d~~~~~~~G~G~s 138 (286)
.+|.++++..+.. .. .|.||++||++++...|. .+...+.. ..+|+|+++|+ ||||.|
T Consensus 47 ~~g~~i~y~~~G~--~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl-----~GhG~S 119 (360)
T PRK06489 47 LPELRLHYTTLGT--PHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDG-----IGHGKS 119 (360)
T ss_pred cCCceEEEEecCC--CCcccccCCCCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCC-----CCCCCC
Confidence 4566776665531 12 578999999998776664 33333310 23799999999 999998
Q ss_pred CCCCCh------hhHHHHHH-HHHHHHHHHhCCCCCcEE-EEEeecChHHHHHHHhhc--CccEEEEeCCCCccc---cc
Q psy4394 139 TGRPSE------KNLYADID-AAWNTLRTRYGISPENII-LYGQSIGTVPTIDLASRY--QVGAVILHSPLMSGM---RV 205 (286)
Q Consensus 139 ~~~~~~------~~~~~d~~-~~~~~l~~~~~~~~~~i~-l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~~~~---~~ 205 (286)
+..... ....++.. .++..+.++.+++ ++. ++||||||++|+.+|.++ +++++|++++..... ..
T Consensus 120 ~~p~~~~~~~~~~~~~~~~a~~~~~~l~~~lgi~--~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~~~~~~~ 197 (360)
T PRK06489 120 SKPSDGLRAAFPRYDYDDMVEAQYRLVTEGLGVK--HLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTEMSGRNW 197 (360)
T ss_pred CCCCcCCCCCCCcccHHHHHHHHHHHHHHhcCCC--ceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCcccccHHHH
Confidence 753211 11123333 3444455666655 775 899999999999999998 899999987642110 00
Q ss_pred -c----ccccc--cccc----cc---ccc----------------------------hhhhc----ccccc-------cc
Q psy4394 206 -A----FPRTK--RTWF----FD---VFP----------------------------RVIFA----NVKTP-------IM 232 (286)
Q Consensus 206 -~----~~~~~--~~~~----~~---~~~----------------------------~~~~~----~~~~~-------~~ 232 (286)
. ..... ..+. .. .+. ..... ..... ..
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (360)
T PRK06489 198 MWRRMLIESIRNDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAAPVTADANDFLYQWD 277 (360)
T ss_pred HHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhhhcCHHHHHHHHH
Confidence 0 00000 0000 00 000 00000 00000 00
Q ss_pred cCCccccCCCCCCCCCCEEEEecCCCCccChhHH--HHHHHHCCCCCCceEecCC
Q psy4394 233 GLSTLENIDKVPKVTSPVLVIHGTEDEVIDLSHG--IAIYERCPRPVEPLWVEGL 285 (286)
Q Consensus 233 ~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~--~~l~~~~~~~~~~~~~~ga 285 (286)
.....+..+.++++++|+|+|+|++|.++|++.+ +++.+.+++. ++++++++
T Consensus 278 ~~~~~d~~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip~a-~l~~i~~a 331 (360)
T PRK06489 278 SSRDYNPSPDLEKIKAPVLAINSADDERNPPETGVMEAALKRVKHG-RLVLIPAS 331 (360)
T ss_pred HhhccChHHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhCcCC-eEEEECCC
Confidence 0011122345678899999999999999999876 7888888876 89999985
No 37
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.83 E-value=2.7e-19 Score=148.31 Aligned_cols=204 Identities=16% Similarity=0.147 Sum_probs=121.1
Q ss_pred ccCCCEEEEEEEeecCCCCeEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCCChh--hHHHH
Q psy4394 73 TSRGNRLACMFMKCSPNARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSEK--NLYAD 150 (286)
Q Consensus 73 ~~~g~~l~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~~~--~~~~d 150 (286)
+.+|..+.+....+ ++.+++||++||++++...+...+..+..+.||+|+++|+ ||+|.|....... ...++
T Consensus 8 ~~~~~~~~~~~~~~-~~~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~-----~G~G~s~~~~~~~~~~~~~~ 81 (288)
T TIGR01250 8 TVDGGYHLFTKTGG-EGEKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQ-----LGCGYSDQPDDSDELWTIDY 81 (288)
T ss_pred cCCCCeEEEEeccC-CCCCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcC-----CCCCCCCCCCcccccccHHH
Confidence 34555555444432 2345789999998766655655566665555899999999 9999987542211 11233
Q ss_pred HHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc--CccEEEEeCCCCcccccc------ccccccc---------
Q psy4394 151 IDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY--QVGAVILHSPLMSGMRVA------FPRTKRT--------- 213 (286)
Q Consensus 151 ~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~~~~~~~------~~~~~~~--------- 213 (286)
..+.+..+.+..+. ++++++|||+||.+++.++..+ +++++|+.++........ .......
T Consensus 82 ~~~~~~~~~~~~~~--~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (288)
T TIGR01250 82 FVDELEEVREKLGL--DKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDSAPEYVKELNRLRKELPPEVRAAIKRCE 159 (288)
T ss_pred HHHHHHHHHHHcCC--CcEEEEEeehHHHHHHHHHHhCccccceeeEecccccchHHHHHHHHHHhhcChhHHHHHHHHH
Confidence 33334444445443 3799999999999999999887 799999988754311100 0000000
Q ss_pred ----cccc----ccchhh--------------hcc---cccc----c---------ccCCccccCCCCCCCCCCEEEEec
Q psy4394 214 ----WFFD----VFPRVI--------------FAN---VKTP----I---------MGLSTLENIDKVPKVTSPVLVIHG 255 (286)
Q Consensus 214 ----~~~~----~~~~~~--------------~~~---~~~~----~---------~~~~~~~~~~~~~~i~~Pvlii~G 255 (286)
+... ...... ... .... . ..+...+..+.++++++|+++++|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G 239 (288)
T TIGR01250 160 ASGDYDNPEYQEAVEVFYHHLLCRTRKWPEALKHLKSGMNTNVYNIMQGPNEFTITGNLKDWDITDKLSEIKVPTLLTVG 239 (288)
T ss_pred hccCcchHHHHHHHHHHHHHhhcccccchHHHHHHhhccCHHHHhcccCCccccccccccccCHHHHhhccCCCEEEEec
Confidence 0000 000000 000 0000 0 000111222445678999999999
Q ss_pred CCCCccChhHHHHHHHHCCCCCCceEecCCC
Q psy4394 256 TEDEVIDLSHGIAIYERCPRPVEPLWVEGLS 286 (286)
Q Consensus 256 ~~D~~v~~~~~~~l~~~~~~~~~~~~~~ga~ 286 (286)
++|.+ +++..+.+.+.+++. ++++++++|
T Consensus 240 ~~D~~-~~~~~~~~~~~~~~~-~~~~~~~~g 268 (288)
T TIGR01250 240 EFDTM-TPEAAREMQELIAGS-RLVVFPDGS 268 (288)
T ss_pred CCCcc-CHHHHHHHHHhccCC-eEEEeCCCC
Confidence 99985 668888888887765 788888875
No 38
>PLN02578 hydrolase
Probab=99.83 E-value=3.2e-19 Score=152.66 Aligned_cols=109 Identities=18% Similarity=0.272 Sum_probs=82.4
Q ss_pred cCCCEEEEEEEeecCCCCeEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCCC---hhhHHHH
Q psy4394 74 SRGNRLACMFMKCSPNARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPS---EKNLYAD 150 (286)
Q Consensus 74 ~~g~~l~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~---~~~~~~d 150 (286)
-+|.++++... ++.|.||++||++++...|...+..+++ +|+|+++|+ ||+|.|+.... ...+.+|
T Consensus 73 ~~~~~i~Y~~~----g~g~~vvliHG~~~~~~~w~~~~~~l~~--~~~v~~~D~-----~G~G~S~~~~~~~~~~~~a~~ 141 (354)
T PLN02578 73 WRGHKIHYVVQ----GEGLPIVLIHGFGASAFHWRYNIPELAK--KYKVYALDL-----LGFGWSDKALIEYDAMVWRDQ 141 (354)
T ss_pred ECCEEEEEEEc----CCCCeEEEECCCCCCHHHHHHHHHHHhc--CCEEEEECC-----CCCCCCCCcccccCHHHHHHH
Confidence 35666665532 2346789999999988888888888864 699999999 99999986532 2333345
Q ss_pred HHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc--CccEEEEeCCC
Q psy4394 151 IDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY--QVGAVILHSPL 199 (286)
Q Consensus 151 ~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~ 199 (286)
+.++++.+. .++++++|||+||.+++.+|.++ +++++|++++.
T Consensus 142 l~~~i~~~~------~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~ 186 (354)
T PLN02578 142 VADFVKEVV------KEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSA 186 (354)
T ss_pred HHHHHHHhc------cCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCC
Confidence 544444432 24899999999999999999998 99999998764
No 39
>KOG4409|consensus
Probab=99.82 E-value=2.5e-19 Score=145.31 Aligned_cols=121 Identities=21% Similarity=0.353 Sum_probs=93.5
Q ss_pred EeccCCCEEEEEEEeecCCCCeEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCCChh---hH
Q psy4394 71 TRTSRGNRLACMFMKCSPNARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSEK---NL 147 (286)
Q Consensus 71 ~~~~~g~~l~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~~~---~~ 147 (286)
+...++..+......++...+..+|++||+|.....|..-+..+++ ..+|.++|+ +|+|+|+...-.. ..
T Consensus 70 v~i~~~~~iw~~~~~~~~~~~~plVliHGyGAg~g~f~~Nf~~La~--~~~vyaiDl-----lG~G~SSRP~F~~d~~~~ 142 (365)
T KOG4409|consen 70 VRIPNGIEIWTITVSNESANKTPLVLIHGYGAGLGLFFRNFDDLAK--IRNVYAIDL-----LGFGRSSRPKFSIDPTTA 142 (365)
T ss_pred eecCCCceeEEEeecccccCCCcEEEEeccchhHHHHHHhhhhhhh--cCceEEecc-----cCCCCCCCCCCCCCcccc
Confidence 3344555665555555556778899999999999999999999986 789999999 9999998653221 11
Q ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc--CccEEEEeCCCC
Q psy4394 148 YADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY--QVGAVILHSPLM 200 (286)
Q Consensus 148 ~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~ 200 (286)
.....+-++..+...++. +.+|+|||+||++|..+|.++ +|+.+|+++|.-
T Consensus 143 e~~fvesiE~WR~~~~L~--KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~G 195 (365)
T KOG4409|consen 143 EKEFVESIEQWRKKMGLE--KMILVGHSFGGYLAAKYALKYPERVEKLILVSPWG 195 (365)
T ss_pred hHHHHHHHHHHHHHcCCc--ceeEeeccchHHHHHHHHHhChHhhceEEEecccc
Confidence 233444444455555766 999999999999999999999 999999999864
No 40
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.82 E-value=5.9e-19 Score=145.57 Aligned_cols=197 Identities=15% Similarity=0.212 Sum_probs=120.0
Q ss_pred CCCEEEEEEEeecCCCCeEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCCCh-hhHHHHHHH
Q psy4394 75 RGNRLACMFMKCSPNARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSE-KNLYADIDA 153 (286)
Q Consensus 75 ~g~~l~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~~-~~~~~d~~~ 153 (286)
+|.++++.- | .+.+|+|||+||++.+...|..+...|.+ .||+|+++|+ ||||.|...+.. ..+.++...
T Consensus 5 ~~~~~~~~~--~-~~~~p~vvliHG~~~~~~~w~~~~~~L~~-~g~~vi~~dl-----~g~G~s~~~~~~~~~~~~~~~~ 75 (273)
T PLN02211 5 NGEEVTDMK--P-NRQPPHFVLIHGISGGSWCWYKIRCLMEN-SGYKVTCIDL-----KSAGIDQSDADSVTTFDEYNKP 75 (273)
T ss_pred ccccccccc--c-cCCCCeEEEECCCCCCcCcHHHHHHHHHh-CCCEEEEecc-----cCCCCCCCCcccCCCHHHHHHH
Confidence 455544332 3 24568999999999988888888887764 4999999999 999987543221 233333444
Q ss_pred HHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc--CccEEEEeCCCCc--ccccc------ccccc---c----cccc
Q psy4394 154 AWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY--QVGAVILHSPLMS--GMRVA------FPRTK---R----TWFF 216 (286)
Q Consensus 154 ~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~~--~~~~~------~~~~~---~----~~~~ 216 (286)
+.+++.+..+ .++++|+||||||.++..++..+ +++++|++++... ..... .+... . .+..
T Consensus 76 l~~~i~~l~~--~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (273)
T PLN02211 76 LIDFLSSLPE--NEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLKLGFQTDEDMKDGVPDLSEFGDVYELGFGL 153 (273)
T ss_pred HHHHHHhcCC--CCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccCCCCCCHHHHHhccccchhhhccceeeeecc
Confidence 4444444322 35999999999999999999877 8999999976432 10000 00000 0 0000
Q ss_pred -------c-ccc-----hhhhcccc-----------c--ccccCCccccCCCCCCC-CCCEEEEecCCCCccChhHHHHH
Q psy4394 217 -------D-VFP-----RVIFANVK-----------T--PIMGLSTLENIDKVPKV-TSPVLVIHGTEDEVIDLSHGIAI 269 (286)
Q Consensus 217 -------~-~~~-----~~~~~~~~-----------~--~~~~~~~~~~~~~~~~i-~~Pvlii~G~~D~~v~~~~~~~l 269 (286)
. ... ..+..... . ....+..........++ ++|+++|.|++|..+|++.++.+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~l~I~g~~D~~ip~~~~~~m 233 (273)
T PLN02211 154 GPDQPPTSAIIKKEFRRKILYQMSPQEDSTLAAMLLRPGPILALRSARFEEETGDIDKVPRVYIKTLHDHVVKPEQQEAM 233 (273)
T ss_pred CCCCCCceeeeCHHHHHHHHhcCCCHHHHHHHHHhcCCcCccccccccccccccccCccceEEEEeCCCCCCCHHHHHHH
Confidence 0 000 00000000 0 00011111111122344 78999999999999999999999
Q ss_pred HHHCCCCCCceEec
Q psy4394 270 YERCPRPVEPLWVE 283 (286)
Q Consensus 270 ~~~~~~~~~~~~~~ 283 (286)
.+.++.. +++.++
T Consensus 234 ~~~~~~~-~~~~l~ 246 (273)
T PLN02211 234 IKRWPPS-QVYELE 246 (273)
T ss_pred HHhCCcc-EEEEEC
Confidence 9998766 777776
No 41
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.82 E-value=5.5e-19 Score=148.41 Aligned_cols=121 Identities=21% Similarity=0.248 Sum_probs=85.1
Q ss_pred EEEeccCCCEEEEEEEeecCCCCeEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCCC-hhhH
Q psy4394 69 FFTRTSRGNRLACMFMKCSPNARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPS-EKNL 147 (286)
Q Consensus 69 ~~~~~~~g~~l~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~-~~~~ 147 (286)
.++...+|.++++.... +.+.+.||++||++++...+ .....+. ..+|+|+++|+ ||||.|..... ....
T Consensus 7 ~~~~~~~~~~l~y~~~g--~~~~~~lvllHG~~~~~~~~-~~~~~~~-~~~~~vi~~D~-----~G~G~S~~~~~~~~~~ 77 (306)
T TIGR01249 7 GYLNVSDNHQLYYEQSG--NPDGKPVVFLHGGPGSGTDP-GCRRFFD-PETYRIVLFDQ-----RGCGKSTPHACLEENT 77 (306)
T ss_pred CeEEcCCCcEEEEEECc--CCCCCEEEEECCCCCCCCCH-HHHhccC-ccCCEEEEECC-----CCCCCCCCCCCcccCC
Confidence 45556678888876543 22346799999987764332 2333332 34899999999 99999985432 1222
Q ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc--CccEEEEeCCCC
Q psy4394 148 YADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY--QVGAVILHSPLM 200 (286)
Q Consensus 148 ~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~ 200 (286)
.+|+.+.+..+.++.+++ +++++||||||.+++.++.++ +++++|+.+++.
T Consensus 78 ~~~~~~dl~~l~~~l~~~--~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~ 130 (306)
T TIGR01249 78 TWDLVADIEKLREKLGIK--NWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFL 130 (306)
T ss_pred HHHHHHHHHHHHHHcCCC--CEEEEEECHHHHHHHHHHHHChHhhhhheeecccc
Confidence 345555556666665544 899999999999999999988 899999988654
No 42
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.82 E-value=9.2e-21 Score=150.92 Aligned_cols=165 Identities=20% Similarity=0.213 Sum_probs=112.7
Q ss_pred HHHHhhccccceeEEEeeccCcCCCCccCCC-------CCCChhhHHHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHH
Q psy4394 109 SFFTGLGSRINCNIFSYDYSGYDYSGYGIST-------GRPSEKNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPT 181 (286)
Q Consensus 109 ~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~-------~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a 181 (286)
.....++ +.||.|+.+|+ ||.+..+ .........+|+.++++++.++..+|+++|+++|+|+||+++
T Consensus 5 ~~~~~la-~~Gy~v~~~~~-----rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a 78 (213)
T PF00326_consen 5 WNAQLLA-SQGYAVLVPNY-----RGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLA 78 (213)
T ss_dssp HHHHHHH-TTT-EEEEEE------TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHH
T ss_pred HHHHHHH-hCCEEEEEEcC-----CCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEccccccccc
Confidence 3444555 45999999999 5554322 112223457899999999999988999999999999999999
Q ss_pred HHHHhhc--CccEEEEeCCCCcccccccccccccccccccch-hhh--cccccccccCCccccCCCCCC--CCCCEEEEe
Q psy4394 182 IDLASRY--QVGAVILHSPLMSGMRVAFPRTKRTWFFDVFPR-VIF--ANVKTPIMGLSTLENIDKVPK--VTSPVLVIH 254 (286)
Q Consensus 182 ~~~a~~~--~i~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~--i~~Pvlii~ 254 (286)
+.++.++ .+++++..+|+.+.......... +.. ... .........+...++...+.+ +++|+|++|
T Consensus 79 ~~~~~~~~~~f~a~v~~~g~~d~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~P~li~h 151 (213)
T PF00326_consen 79 LLAATQHPDRFKAAVAGAGVSDLFSYYGTTDI-------YTKAEYLEYGDPWDNPEFYRELSPISPADNVQIKPPVLIIH 151 (213)
T ss_dssp HHHHHHTCCGSSEEEEESE-SSTTCSBHHTCC-------HHHGHHHHHSSTTTSHHHHHHHHHGGGGGGCGGGSEEEEEE
T ss_pred chhhcccceeeeeeeccceecchhcccccccc-------cccccccccCccchhhhhhhhhccccccccccCCCCEEEEc
Confidence 9999966 88999999999884433222111 111 000 111111222333445555555 789999999
Q ss_pred cCCCCccChhHHHHHHHHCCC---CCCceEecCCC
Q psy4394 255 GTEDEVIDLSHGIAIYERCPR---PVEPLWVEGLS 286 (286)
Q Consensus 255 G~~D~~v~~~~~~~l~~~~~~---~~~~~~~~ga~ 286 (286)
|++|..||++++.++++++.+ +.+++++|++|
T Consensus 152 G~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~g 186 (213)
T PF00326_consen 152 GENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEG 186 (213)
T ss_dssp ETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-S
T ss_pred cCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCC
Confidence 999999999999999988754 36888999875
No 43
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.82 E-value=2e-19 Score=148.47 Aligned_cols=124 Identities=19% Similarity=0.277 Sum_probs=94.0
Q ss_pred EEEeccCCCEEEEEEEeecCCCCeEEEEecCCccc----cchhhHHHHhhccccceeEEEeeccCcCCCCccCCCCC-CC
Q psy4394 69 FFTRTSRGNRLACMFMKCSPNARFTILFSHGNAVD----IGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGR-PS 143 (286)
Q Consensus 69 ~~~~~~~g~~l~~~~~~~~~~~~p~vv~~HG~~~~----~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~-~~ 143 (286)
+.+ ..+|..+.+++..|.+.+++.||++||+... ...+..+...++ +.||+|+++|+ ||||.|.+. ..
T Consensus 5 ~~~-~~~~~~l~g~~~~p~~~~~~~vv~i~gg~~~~~g~~~~~~~la~~l~-~~G~~v~~~Dl-----~G~G~S~~~~~~ 77 (274)
T TIGR03100 5 LTF-SCEGETLVGVLHIPGASHTTGVLIVVGGPQYRVGSHRQFVLLARRLA-EAGFPVLRFDY-----RGMGDSEGENLG 77 (274)
T ss_pred EEE-EcCCcEEEEEEEcCCCCCCCeEEEEeCCccccCCchhHHHHHHHHHH-HCCCEEEEeCC-----CCCCCCCCCCCC
Confidence 444 3467889988888764445567777765432 222444556666 44999999999 999998765 45
Q ss_pred hhhHHHHHHHHHHHHHHHh-CCCCCcEEEEEeecChHHHHHHHhhc-CccEEEEeCCCCc
Q psy4394 144 EKNLYADIDAAWNTLRTRY-GISPENIILYGQSIGTVPTIDLASRY-QVGAVILHSPLMS 201 (286)
Q Consensus 144 ~~~~~~d~~~~~~~l~~~~-~~~~~~i~l~G~S~Gg~~a~~~a~~~-~i~~~v~~~p~~~ 201 (286)
...+.+|+.+++++++++. ++ ++++++|||+||.+++.++... +++++|+++|+..
T Consensus 78 ~~~~~~d~~~~~~~l~~~~~g~--~~i~l~G~S~Gg~~a~~~a~~~~~v~~lil~~p~~~ 135 (274)
T TIGR03100 78 FEGIDADIAAAIDAFREAAPHL--RRIVAWGLCDAASAALLYAPADLRVAGLVLLNPWVR 135 (274)
T ss_pred HHHHHHHHHHHHHHHHhhCCCC--CcEEEEEECHHHHHHHHHhhhCCCccEEEEECCccC
Confidence 5667789999999998764 33 4899999999999999998765 9999999999864
No 44
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.81 E-value=4.3e-19 Score=143.51 Aligned_cols=180 Identities=16% Similarity=0.235 Sum_probs=116.8
Q ss_pred CeEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCCChhhHHHHHHHHHHHHHHHhCCCCCcEE
Q psy4394 91 RFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSEKNLYADIDAAWNTLRTRYGISPENII 170 (286)
Q Consensus 91 ~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~ 170 (286)
+|.||++||++++...|...+..+.+ +|+|+++|+ ||+|.|..... .++.++++.+.+.. .++++
T Consensus 4 ~~~iv~~HG~~~~~~~~~~~~~~l~~--~~~vi~~d~-----~G~G~s~~~~~-----~~~~~~~~~~~~~~---~~~~~ 68 (245)
T TIGR01738 4 NVHLVLIHGWGMNAEVFRCLDEELSA--HFTLHLVDL-----PGHGRSRGFGP-----LSLADAAEAIAAQA---PDPAI 68 (245)
T ss_pred CceEEEEcCCCCchhhHHHHHHhhcc--CeEEEEecC-----CcCccCCCCCC-----cCHHHHHHHHHHhC---CCCeE
Confidence 47899999999999889888888864 799999999 99999875422 12333444444442 25999
Q ss_pred EEEeecChHHHHHHHhhc--CccEEEEeCCCCcccc-cccc-ccc----ccc---ccccc----chhh----hcc-----
Q psy4394 171 LYGQSIGTVPTIDLASRY--QVGAVILHSPLMSGMR-VAFP-RTK----RTW---FFDVF----PRVI----FAN----- 226 (286)
Q Consensus 171 l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~~~~~-~~~~-~~~----~~~---~~~~~----~~~~----~~~----- 226 (286)
++||||||.+++.++.++ +++++|++++...... .... ... ..+ ....+ .... ...
T Consensus 69 lvG~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (245)
T TIGR01738 69 WLGWSLGGLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQTLGTPTARQ 148 (245)
T ss_pred EEEEcHHHHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCccch
Confidence 999999999999999988 7999999876432100 0000 000 000 00000 0000 000
Q ss_pred --------cccc-----------cccCCccccCCCCCCCCCCEEEEecCCCCccChhHHHHHHHHCCCCCCceEecCCC
Q psy4394 227 --------VKTP-----------IMGLSTLENIDKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPRPVEPLWVEGLS 286 (286)
Q Consensus 227 --------~~~~-----------~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~ga~ 286 (286)
.... ...+...+....+.++++|+++++|++|.++|++..+.+.+.+++. ++++++++|
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~g 226 (245)
T TIGR01738 149 DARALKQTLLARPTPNVQVLQAGLEILATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLAPHS-ELYIFAKAA 226 (245)
T ss_pred HHHHHHHHhhccCCCCHHHHHHHHHHhhcccHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhCCCC-eEEEeCCCC
Confidence 0000 0000111112345688999999999999999999999998888765 889999875
No 45
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.81 E-value=3.6e-19 Score=141.51 Aligned_cols=179 Identities=13% Similarity=0.116 Sum_probs=113.3
Q ss_pred EEEeec--CCCCeEEEEecCCccccchhhH--HHHhhccccceeEEEeeccCcCCCCccCCCCC---------CChhhHH
Q psy4394 82 MFMKCS--PNARFTILFSHGNAVDIGQMSS--FFTGLGSRINCNIFSYDYSGYDYSGYGISTGR---------PSEKNLY 148 (286)
Q Consensus 82 ~~~~~~--~~~~p~vv~~HG~~~~~~~~~~--~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~---------~~~~~~~ 148 (286)
+++.|. +++.|+||++||++++...+.. .+..++++.||.|+++|+ +|++.+... .......
T Consensus 2 ~ly~P~~~~~~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~-----~g~~~~~~~~~~~~~~~~~~~~~~~ 76 (212)
T TIGR01840 2 YVYVPAGLTGPRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQ-----TSYNSSNNCWDWFFTHHRARGTGEV 76 (212)
T ss_pred EEEcCCCCCCCCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCC-----cCccccCCCCCCCCccccCCCCccH
Confidence 344443 3567999999999887655431 244555567999999999 887643321 0112345
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc--CccEEEEeCCCCccccccccccccccc-ccccchhhhc
Q psy4394 149 ADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY--QVGAVILHSPLMSGMRVAFPRTKRTWF-FDVFPRVIFA 225 (286)
Q Consensus 149 ~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 225 (286)
.|+..+++++.+++++++++++|+|||+||.+++.++.++ .+.+++.+++................. ...... +..
T Consensus 77 ~~~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 155 (212)
T TIGR01840 77 ESLHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPYGEASSSISATPQMCTAATAAS-VCR 155 (212)
T ss_pred HHHHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCcccccccchhhHhhcCCCCCHHH-HHH
Confidence 7888999999999889999999999999999999999888 688888887654211100000000000 000000 000
Q ss_pred ccccccccCCccccCCCCCCCCCCEEEEecCCCCccChhHHHHHHHHCCC
Q psy4394 226 NVKTPIMGLSTLENIDKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPR 275 (286)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~ 275 (286)
. .. ...........|++++||++|.+||++.++++.+++.+
T Consensus 156 ~-------~~--~~~~~~~~~~p~~~i~hG~~D~vVp~~~~~~~~~~l~~ 196 (212)
T TIGR01840 156 L-------VR--GMQSEYNGPTPIMSVVHGDADYTVLPGNADEIRDAMLK 196 (212)
T ss_pred H-------Hh--ccCCcccCCCCeEEEEEcCCCceeCcchHHHHHHHHHH
Confidence 0 00 00111222344578999999999999999999887654
No 46
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.81 E-value=1.3e-20 Score=150.41 Aligned_cols=182 Identities=24% Similarity=0.396 Sum_probs=119.5
Q ss_pred EEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCCC--hhhHHHHHHHHHHHHHHHhCCCCCcEEE
Q psy4394 94 ILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPS--EKNLYADIDAAWNTLRTRYGISPENIIL 171 (286)
Q Consensus 94 vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~--~~~~~~d~~~~~~~l~~~~~~~~~~i~l 171 (286)
||++||++++...|..++..+. + ||+|+++|+ ||+|.|..... ...+.+++.++.+.+ +..+. +++++
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~-~-~~~v~~~d~-----~G~G~s~~~~~~~~~~~~~~~~~l~~~l-~~~~~--~~~~l 70 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALA-R-GYRVIAFDL-----PGHGRSDPPPDYSPYSIEDYAEDLAELL-DALGI--KKVIL 70 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHH-T-TSEEEEEEC-----TTSTTSSSHSSGSGGSHHHHHHHHHHHH-HHTTT--SSEEE
T ss_pred eEEECCCCCCHHHHHHHHHHHh-C-CCEEEEEec-----CCccccccccccCCcchhhhhhhhhhcc-ccccc--ccccc
Confidence 7999999999999999999885 3 999999999 99999987543 223333333333333 44343 59999
Q ss_pred EEeecChHHHHHHHhhc--CccEEEEeCCCCcccccc----ccccccccc-----------ccccchhhhc----c-ccc
Q psy4394 172 YGQSIGTVPTIDLASRY--QVGAVILHSPLMSGMRVA----FPRTKRTWF-----------FDVFPRVIFA----N-VKT 229 (286)
Q Consensus 172 ~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~~~~~~~----~~~~~~~~~-----------~~~~~~~~~~----~-~~~ 229 (286)
+|||+||.+++.++.++ .++++|+++|........ .......+. ...+...... . ...
T Consensus 71 vG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (228)
T PF12697_consen 71 VGHSMGGMIALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLASRFFYRWFDGDEPEDLIRS 150 (228)
T ss_dssp EEETHHHHHHHHHHHHSGGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred cccccccccccccccccccccccceeecccccccccccccccchhhhhhhhccccccccccccccccccccccccccccc
Confidence 99999999999999987 899999999987522110 000000000 0000000000 0 000
Q ss_pred ---cccc-----CCccccCCCCCCCCCCEEEEecCCCCccChhHHHHHHHHCCCCCCceEecCCC
Q psy4394 230 ---PIMG-----LSTLENIDKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPRPVEPLWVEGLS 286 (286)
Q Consensus 230 ---~~~~-----~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~ga~ 286 (286)
.... ....+....++++++|+++++|++|.+++.+..+++.+.+++. ++++++|+|
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~g 214 (228)
T PF12697_consen 151 SRRALAEYLRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKLPNA-ELVVIPGAG 214 (228)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHSTTE-EEEEETTSS
T ss_pred cccccccccccccccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHCCCC-EEEEECCCC
Confidence 0000 0111223455677999999999999999999999999998765 899999875
No 47
>PRK07581 hypothetical protein; Validated
Probab=99.81 E-value=3.8e-19 Score=151.60 Aligned_cols=118 Identities=19% Similarity=0.227 Sum_probs=83.1
Q ss_pred CCCEEEEEEEeec-CCCCeEEEEecCCccccchhhHHH---HhhccccceeEEEeeccCcCCCCccCCCCCCC------h
Q psy4394 75 RGNRLACMFMKCS-PNARFTILFSHGNAVDIGQMSSFF---TGLGSRINCNIFSYDYSGYDYSGYGISTGRPS------E 144 (286)
Q Consensus 75 ~g~~l~~~~~~~~-~~~~p~vv~~HG~~~~~~~~~~~~---~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~------~ 144 (286)
+|.++++..+.+. +...|+||+.||++++...|...+ ..+. ..+|+|+++|+ ||||.|..... .
T Consensus 24 ~~~~l~y~~~G~~~~~~~~~vll~~~~~~~~~~~~~~~~~~~~l~-~~~~~vi~~D~-----~G~G~S~~~~~~~~~~~~ 97 (339)
T PRK07581 24 PDARLAYKTYGTLNAAKDNAILYPTWYSGTHQDNEWLIGPGRALD-PEKYFIIIPNM-----FGNGLSSSPSNTPAPFNA 97 (339)
T ss_pred CCceEEEEecCccCCCCCCEEEEeCCCCCCcccchhhccCCCccC-cCceEEEEecC-----CCCCCCCCCCCCCCCCCC
Confidence 5666666655431 134577888888776655554433 2343 33899999999 99999874421 1
Q ss_pred hh-----HHHHHHHHHHHHHHHhCCCCCc-EEEEEeecChHHHHHHHhhc--CccEEEEeCCCC
Q psy4394 145 KN-----LYADIDAAWNTLRTRYGISPEN-IILYGQSIGTVPTIDLASRY--QVGAVILHSPLM 200 (286)
Q Consensus 145 ~~-----~~~d~~~~~~~l~~~~~~~~~~-i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~ 200 (286)
.. ..+|+.+....+.+.++++ + ++|+||||||++|+.+|.++ +|+++|++++..
T Consensus 98 ~~~~~~~~~~~~~~~~~~l~~~lgi~--~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~ 159 (339)
T PRK07581 98 ARFPHVTIYDNVRAQHRLLTEKFGIE--RLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTA 159 (339)
T ss_pred CCCCceeHHHHHHHHHHHHHHHhCCC--ceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCC
Confidence 12 3567776666677777765 8 57999999999999999999 899999986543
No 48
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.81 E-value=2.2e-18 Score=149.34 Aligned_cols=119 Identities=20% Similarity=0.227 Sum_probs=84.3
Q ss_pred EEeccCCC--EEEEEEEeecCCCCeEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCCCh---
Q psy4394 70 FTRTSRGN--RLACMFMKCSPNARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSE--- 144 (286)
Q Consensus 70 ~~~~~~g~--~l~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~~--- 144 (286)
++...+|. .+....+++ ++.+|+||++||++++...|...+..+.+ +|+|+++|+ ||+|.|+.....
T Consensus 83 ~~~~~~~~~~~~~~~~~~~-~~~~p~vvllHG~~~~~~~~~~~~~~L~~--~~~vi~~D~-----rG~G~S~~~~~~~~~ 154 (402)
T PLN02894 83 WFRSASNEPRFINTVTFDS-KEDAPTLVMVHGYGASQGFFFRNFDALAS--RFRVIAIDQ-----LGWGGSSRPDFTCKS 154 (402)
T ss_pred ceecccCcCCeEEEEEecC-CCCCCEEEEECCCCcchhHHHHHHHHHHh--CCEEEEECC-----CCCCCCCCCCccccc
Confidence 33344543 565555543 34668999999999888888888887764 699999999 999998754211
Q ss_pred -hhHHHHHHH-HHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc--CccEEEEeCCC
Q psy4394 145 -KNLYADIDA-AWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY--QVGAVILHSPL 199 (286)
Q Consensus 145 -~~~~~d~~~-~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~ 199 (286)
....+.+.+ +.+++ +..++ ++++++||||||.+++.+|.++ +++++|+++|.
T Consensus 155 ~~~~~~~~~~~i~~~~-~~l~~--~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~ 210 (402)
T PLN02894 155 TEETEAWFIDSFEEWR-KAKNL--SNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPA 210 (402)
T ss_pred HHHHHHHHHHHHHHHH-HHcCC--CCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCc
Confidence 111122222 22333 33344 4899999999999999999998 89999999875
No 49
>KOG4178|consensus
Probab=99.81 E-value=3.4e-18 Score=138.24 Aligned_cols=118 Identities=26% Similarity=0.407 Sum_probs=93.1
Q ss_pred cccEEEeccCCCEEEEEEEeecCCCCeEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCCC--
Q psy4394 66 IEGFFTRTSRGNRLACMFMKCSPNARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPS-- 143 (286)
Q Consensus 66 ~~~~~~~~~~g~~l~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~-- 143 (286)
++...+ +.+| +.+++....++..|+|+++||++.....|+.++..++.. ||+|+++|+ ||+|.|+..+.
T Consensus 22 ~~hk~~-~~~g--I~~h~~e~g~~~gP~illlHGfPe~wyswr~q~~~la~~-~~rviA~Dl-----rGyG~Sd~P~~~~ 92 (322)
T KOG4178|consen 22 ISHKFV-TYKG--IRLHYVEGGPGDGPIVLLLHGFPESWYSWRHQIPGLASR-GYRVIAPDL-----RGYGFSDAPPHIS 92 (322)
T ss_pred cceeeE-EEcc--EEEEEEeecCCCCCEEEEEccCCccchhhhhhhhhhhhc-ceEEEecCC-----CCCCCCCCCCCcc
Confidence 344444 4466 555555556667899999999999999999999999855 899999999 99999987654
Q ss_pred ---hhhHHHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc--CccEEEEeCC
Q psy4394 144 ---EKNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY--QVGAVILHSP 198 (286)
Q Consensus 144 ---~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p 198 (286)
......|+.++++.+ +.+ +++++||+||+.+|..++..+ +++++|+.+.
T Consensus 93 ~Yt~~~l~~di~~lld~L----g~~--k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv 146 (322)
T KOG4178|consen 93 EYTIDELVGDIVALLDHL----GLK--KAFLVGHDWGAIVAWRLALFYPERVDGLVTLNV 146 (322)
T ss_pred eeeHHHHHHHHHHHHHHh----ccc--eeEEEeccchhHHHHHHHHhChhhcceEEEecC
Confidence 233345656655555 433 999999999999999999998 9999999864
No 50
>KOG1454|consensus
Probab=99.80 E-value=2e-18 Score=144.68 Aligned_cols=190 Identities=16% Similarity=0.220 Sum_probs=125.5
Q ss_pred CCCeEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCC-CCChhhHHHHHHHHHHHHHHHhCCCCC
Q psy4394 89 NARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTG-RPSEKNLYADIDAAWNTLRTRYGISPE 167 (286)
Q Consensus 89 ~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~-~~~~~~~~~d~~~~~~~l~~~~~~~~~ 167 (286)
..++.||++||++++...|+..+..+.+..|+.|+++|+ +|+|.++. +....-...+....+..+..+.+..
T Consensus 56 ~~~~pvlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl-----~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~~~~-- 128 (326)
T KOG1454|consen 56 KDKPPVLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDL-----PGHGYSSPLPRGPLYTLRELVELIRRFVKEVFVE-- 128 (326)
T ss_pred CCCCcEEEeccccCCcccHhhhccccccccceEEEEEec-----CCCCcCCCCCCCCceehhHHHHHHHHHHHhhcCc--
Confidence 467899999999999999999999998877899999999 99995443 3333333455566665555555533
Q ss_pred cEEEEEeecChHHHHHHHhhc--CccEEE---EeCCCCcccccc-------cc---------------cccccccccccc
Q psy4394 168 NIILYGQSIGTVPTIDLASRY--QVGAVI---LHSPLMSGMRVA-------FP---------------RTKRTWFFDVFP 220 (286)
Q Consensus 168 ~i~l~G~S~Gg~~a~~~a~~~--~i~~~v---~~~p~~~~~~~~-------~~---------------~~~~~~~~~~~~ 220 (286)
++.++|||+||.+|+.+|+.+ .+++++ +++|.....+.. .. .....+......
T Consensus 129 ~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 208 (326)
T KOG1454|consen 129 PVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLSALELLIPLSLTEPVRLVSEGLLR 208 (326)
T ss_pred ceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhhhhhccHhhhcCccccccchhheeHhhhc
Confidence 799999999999999999998 889999 555543211111 00 000000000000
Q ss_pred hhhh-------------cccc---------ccccc----CCc--cccCCCCCCCC-CCEEEEecCCCCccChhHHHHHHH
Q psy4394 221 RVIF-------------ANVK---------TPIMG----LST--LENIDKVPKVT-SPVLVIHGTEDEVIDLSHGIAIYE 271 (286)
Q Consensus 221 ~~~~-------------~~~~---------~~~~~----~~~--~~~~~~~~~i~-~Pvlii~G~~D~~v~~~~~~~l~~ 271 (286)
.... .... +.... ... ......++++. +|+|+++|++|+++|.+.+..+.+
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~~~~~~~ 288 (326)
T KOG1454|consen 209 CLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLIKKIWKCPVLIIWGDKDQIVPLELAEELKK 288 (326)
T ss_pred ceeeeccccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHhhccccCCceEEEEcCcCCccCHHHHHHHHh
Confidence 0000 0000 00000 000 12233456666 999999999999999999999999
Q ss_pred HCCCCCCceEecCCC
Q psy4394 272 RCPRPVEPLWVEGLS 286 (286)
Q Consensus 272 ~~~~~~~~~~~~ga~ 286 (286)
++++ .+++.++++|
T Consensus 289 ~~pn-~~~~~I~~~g 302 (326)
T KOG1454|consen 289 KLPN-AELVEIPGAG 302 (326)
T ss_pred hCCC-ceEEEeCCCC
Confidence 9954 4999999886
No 51
>PRK11460 putative hydrolase; Provisional
Probab=99.80 E-value=1.3e-18 Score=139.80 Aligned_cols=162 Identities=22% Similarity=0.250 Sum_probs=109.0
Q ss_pred cCCCCeEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCC-----CCCh-------hhHHHHHHHH
Q psy4394 87 SPNARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTG-----RPSE-------KNLYADIDAA 154 (286)
Q Consensus 87 ~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~-----~~~~-------~~~~~d~~~~ 154 (286)
...+.|+||++||.+++...+......+... ++.+..++++|....+.+.... .... ....+.+.+.
T Consensus 12 ~~~~~~~vIlLHG~G~~~~~~~~l~~~l~~~-~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~ 90 (232)
T PRK11460 12 DKPAQQLLLLFHGVGDNPVAMGEIGSWFAPA-FPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIET 90 (232)
T ss_pred CCCCCcEEEEEeCCCCChHHHHHHHHHHHHH-CCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHH
Confidence 4456789999999999998898888888643 5555555563321111111000 0011 1222345566
Q ss_pred HHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc--CccEEEEeCCCCcccccccccccccccccccchhhhcccccccc
Q psy4394 155 WNTLRTRYGISPENIILYGQSIGTVPTIDLASRY--QVGAVILHSPLMSGMRVAFPRTKRTWFFDVFPRVIFANVKTPIM 232 (286)
Q Consensus 155 ~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (286)
++++.++++++.++++++|+|+||.+++.++..+ .+.+++..++.... .+
T Consensus 91 i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~~----------------~~------------ 142 (232)
T PRK11460 91 VRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYAS----------------LP------------ 142 (232)
T ss_pred HHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEecccccc----------------cc------------
Confidence 6777777888888999999999999999988776 45666666653210 00
Q ss_pred cCCccccCCCCCCCCCCEEEEecCCCCccChhHHHHHHHHCCCC---CCceEecCCC
Q psy4394 233 GLSTLENIDKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPRP---VEPLWVEGLS 286 (286)
Q Consensus 233 ~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~---~~~~~~~ga~ 286 (286)
.....++|++++||++|++||++.++++.+.++.. .++.+++++|
T Consensus 143 ---------~~~~~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~g 190 (232)
T PRK11460 143 ---------ETAPTATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLG 190 (232)
T ss_pred ---------ccccCCCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCC
Confidence 01123689999999999999999999999887543 5677788764
No 52
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.80 E-value=1.3e-18 Score=140.83 Aligned_cols=102 Identities=24% Similarity=0.301 Sum_probs=78.7
Q ss_pred CeEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCCC-hhhHHHHHH-HHHHHHHHHhCCCCCc
Q psy4394 91 RFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPS-EKNLYADID-AAWNTLRTRYGISPEN 168 (286)
Q Consensus 91 ~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~-~~~~~~d~~-~~~~~l~~~~~~~~~~ 168 (286)
+|+||++||.+++...|..+...+. + ||+|+++|+ ||+|.|..... .....++.. .++..+.+..+ .++
T Consensus 1 ~~~vv~~hG~~~~~~~~~~~~~~L~-~-~~~v~~~d~-----~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 71 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQALIELLG-P-HFRCLAIDL-----PGHGSSQSPDEIERYDFEEAAQDILATLLDQLG--IEP 71 (251)
T ss_pred CCEEEEEcCCCCchhhHHHHHHHhc-c-cCeEEEEcC-----CCCCCCCCCCccChhhHHHHHHHHHHHHHHHcC--CCe
Confidence 3689999999999999999998887 3 899999999 99999875432 111223333 32555555544 459
Q ss_pred EEEEEeecChHHHHHHHhhc--CccEEEEeCCCCc
Q psy4394 169 IILYGQSIGTVPTIDLASRY--QVGAVILHSPLMS 201 (286)
Q Consensus 169 i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~~ 201 (286)
++++|||+||.+++.++.++ .+++++++++...
T Consensus 72 ~~l~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~~~ 106 (251)
T TIGR03695 72 FFLVGYSMGGRIALYYALQYPERVQGLILESGSPG 106 (251)
T ss_pred EEEEEeccHHHHHHHHHHhCchheeeeEEecCCCC
Confidence 99999999999999999987 7999999887543
No 53
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.79 E-value=2.1e-18 Score=145.12 Aligned_cols=208 Identities=16% Similarity=0.175 Sum_probs=128.5
Q ss_pred CCccccEEEeccCCCEEEEEEEeec-CCCCeEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCCC
Q psy4394 63 RSNIEGFFTRTSRGNRLACMFMKCS-PNARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGR 141 (286)
Q Consensus 63 ~~~~~~~~~~~~~g~~l~~~~~~~~-~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~ 141 (286)
...++++.++.. |..|.+++..|. +++.|+||++.|..+-..++...+...+...|++++++|. ||.|.|...
T Consensus 162 ~~~i~~v~iP~e-g~~I~g~LhlP~~~~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDm-----PG~G~s~~~ 235 (411)
T PF06500_consen 162 DYPIEEVEIPFE-GKTIPGYLHLPSGEKPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDM-----PGQGESPKW 235 (411)
T ss_dssp SSEEEEEEEEET-TCEEEEEEEESSSSS-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE-------TTSGGGTTT
T ss_pred CCCcEEEEEeeC-CcEEEEEEEcCCCCCCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEcc-----CCCcccccC
Confidence 345778888765 488988887774 4567999999998888888777776655466999999999 999998654
Q ss_pred CChhhHHHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc--CccEEEEeCCCCccccccccccccccccccc
Q psy4394 142 PSEKNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY--QVGAVILHSPLMSGMRVAFPRTKRTWFFDVF 219 (286)
Q Consensus 142 ~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~~~~~~~~~~~~~~~~~~~~ 219 (286)
+..++...-..++++|+.+...+|.++|+++|.|+||++|..+|..+ +++++|..+|.++-+ +.. .+.....
T Consensus 236 ~l~~D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~---ft~---~~~~~~~ 309 (411)
T PF06500_consen 236 PLTQDSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHF---FTD---PEWQQRV 309 (411)
T ss_dssp -S-S-CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCG---GH----HHHHTTS
T ss_pred CCCcCHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhh---hcc---HHHHhcC
Confidence 43333334567899999999889999999999999999999998644 999999999875421 100 0000111
Q ss_pred chhhh----cccccc-------cccCCccccCC--CC--CCCCCCEEEEecCCCCccChhHHHHHHHHCCCCCCceEec
Q psy4394 220 PRVIF----ANVKTP-------IMGLSTLENID--KV--PKVTSPVLVIHGTEDEVIDLSHGIAIYERCPRPVEPLWVE 283 (286)
Q Consensus 220 ~~~~~----~~~~~~-------~~~~~~~~~~~--~~--~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~ 283 (286)
+..+. ...... ...+..++... .+ ++..+|+|.+.|++|+++|.++.+-+...-... +...++
T Consensus 310 P~my~d~LA~rlG~~~~~~~~l~~el~~~SLk~qGlL~~rr~~~plL~i~~~~D~v~P~eD~~lia~~s~~g-k~~~~~ 387 (411)
T PF06500_consen 310 PDMYLDVLASRLGMAAVSDESLRGELNKFSLKTQGLLSGRRCPTPLLAINGEDDPVSPIEDSRLIAESSTDG-KALRIP 387 (411)
T ss_dssp -HHHHHHHHHHCT-SCE-HHHHHHHGGGGSTTTTTTTTSS-BSS-EEEEEETT-SSS-HHHHHHHHHTBTT--EEEEE-
T ss_pred CHHHHHHHHHHhCCccCCHHHHHHHHHhcCcchhccccCCCCCcceEEeecCCCCCCCHHHHHHHHhcCCCC-ceeecC
Confidence 11111 000000 01122333322 23 667899999999999999999998888775554 444444
No 54
>PRK11071 esterase YqiA; Provisional
Probab=99.78 E-value=2.1e-18 Score=134.25 Aligned_cols=164 Identities=18% Similarity=0.259 Sum_probs=103.6
Q ss_pred eEEEEecCCccccchhhH-HHHhhccc--cceeEEEeeccCcCCCCccCCCCCCChhhHHHHHHHHHHHHHHHhCCCCCc
Q psy4394 92 FTILFSHGNAVDIGQMSS-FFTGLGSR--INCNIFSYDYSGYDYSGYGISTGRPSEKNLYADIDAAWNTLRTRYGISPEN 168 (286)
Q Consensus 92 p~vv~~HG~~~~~~~~~~-~~~~l~~~--~g~~vi~~d~~~~~~~G~G~s~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~ 168 (286)
|+||++||++++...|.. .+..+..+ .+|+|+++|+ ||++ ++..+.+..+.++.+. ++
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl-----~g~~------------~~~~~~l~~l~~~~~~--~~ 62 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQL-----PPYP------------ADAAELLESLVLEHGG--DP 62 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCC-----CCCH------------HHHHHHHHHHHHHcCC--CC
Confidence 579999999998877763 23333322 2799999999 9875 2344555555555554 48
Q ss_pred EEEEEeecChHHHHHHHhhcCccEEEEeCCCCcccccccccccc---cccccccchhhhcccccccccCCccccCCCCCC
Q psy4394 169 IILYGQSIGTVPTIDLASRYQVGAVILHSPLMSGMRVAFPRTKR---TWFFDVFPRVIFANVKTPIMGLSTLENIDKVPK 245 (286)
Q Consensus 169 i~l~G~S~Gg~~a~~~a~~~~i~~~v~~~p~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (286)
++++|+|+||.+++.+|.++.. .+|+++|..+..+........ .+..+.+. . ........... ....+.
T Consensus 63 ~~lvG~S~Gg~~a~~~a~~~~~-~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~d~~~~-~~~~i~- 134 (190)
T PRK11071 63 LGLVGSSLGGYYATWLSQCFML-PAVVVNPAVRPFELLTDYLGENENPYTGQQYV---L--ESRHIYDLKVM-QIDPLE- 134 (190)
T ss_pred eEEEEECHHHHHHHHHHHHcCC-CEEEECCCCCHHHHHHHhcCCcccccCCCcEE---E--cHHHHHHHHhc-CCccCC-
Confidence 9999999999999999998853 357788876622211111110 00000000 0 00000001111 122233
Q ss_pred CCCCEEEEecCCCCccChhHHHHHHHHCCCCCCceEecCCC
Q psy4394 246 VTSPVLVIHGTEDEVIDLSHGIAIYERCPRPVEPLWVEGLS 286 (286)
Q Consensus 246 i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~ga~ 286 (286)
..+|++++||++|++||++.+.++++.. +.+.++|+|
T Consensus 135 ~~~~v~iihg~~De~V~~~~a~~~~~~~----~~~~~~ggd 171 (190)
T PRK11071 135 SPDLIWLLQQTGDEVLDYRQAVAYYAAC----RQTVEEGGN 171 (190)
T ss_pred ChhhEEEEEeCCCCcCCHHHHHHHHHhc----ceEEECCCC
Confidence 6789999999999999999999999954 456778875
No 55
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.78 E-value=8.2e-18 Score=144.04 Aligned_cols=113 Identities=19% Similarity=0.281 Sum_probs=86.2
Q ss_pred ccCCCEEEEEEEeecCCCCeEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCC-------Chh
Q psy4394 73 TSRGNRLACMFMKCSPNARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRP-------SEK 145 (286)
Q Consensus 73 ~~~g~~l~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~-------~~~ 145 (286)
+.+|.++++... .+...|+||++||++.+...|..++..+.+ +|+|+++|+ ||||.|+... +..
T Consensus 111 ~~~~~~~~y~~~--G~~~~~~ivllHG~~~~~~~w~~~~~~L~~--~~~Via~Dl-----pG~G~S~~p~~~~~~~ys~~ 181 (383)
T PLN03084 111 SSDLFRWFCVES--GSNNNPPVLLIHGFPSQAYSYRKVLPVLSK--NYHAIAFDW-----LGFGFSDKPQPGYGFNYTLD 181 (383)
T ss_pred cCCceEEEEEec--CCCCCCeEEEECCCCCCHHHHHHHHHHHhc--CCEEEEECC-----CCCCCCCCCcccccccCCHH
Confidence 456666655543 223468899999999999999998888864 799999999 9999987643 223
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc--CccEEEEeCCCC
Q psy4394 146 NLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY--QVGAVILHSPLM 200 (286)
Q Consensus 146 ~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~ 200 (286)
.+.+|+.++++ +.+++ +++|+|||+||.+++.++.++ +++++|+++|..
T Consensus 182 ~~a~~l~~~i~----~l~~~--~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~ 232 (383)
T PLN03084 182 EYVSSLESLID----ELKSD--KVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPL 232 (383)
T ss_pred HHHHHHHHHHH----HhCCC--CceEEEECHHHHHHHHHHHhChHhhcEEEEECCCC
Confidence 33444444444 33443 899999999999999999988 899999999864
No 56
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.78 E-value=2.7e-18 Score=138.60 Aligned_cols=205 Identities=15% Similarity=0.168 Sum_probs=129.5
Q ss_pred EEEeccCCCEEEEEEEe-ecCCCCeEEEEecCCcccc-chhh-HHHHhhccccceeEEEeeccCcCCCCccCCCCC---C
Q psy4394 69 FFTRTSRGNRLACMFMK-CSPNARFTILFSHGNAVDI-GQMS-SFFTGLGSRINCNIFSYDYSGYDYSGYGISTGR---P 142 (286)
Q Consensus 69 ~~~~~~~g~~l~~~~~~-~~~~~~p~vv~~HG~~~~~-~~~~-~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~---~ 142 (286)
..+.+.||..+...+.. |....+|.||++||..++. +.+. .+...+. +.||.|+++|+ |||+.+... .
T Consensus 52 e~v~~pdg~~~~ldw~~~p~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~-~rg~~~Vv~~~-----Rgcs~~~n~~p~~ 125 (345)
T COG0429 52 ERLETPDGGFIDLDWSEDPRAAKKPLVVLFHGLEGSSNSPYARGLMRALS-RRGWLVVVFHF-----RGCSGEANTSPRL 125 (345)
T ss_pred EEEEcCCCCEEEEeeccCccccCCceEEEEeccCCCCcCHHHHHHHHHHH-hcCCeEEEEec-----ccccCCcccCcce
Confidence 35667888776655544 5666779999999976544 3343 4445555 55999999999 999987643 3
Q ss_pred ChhhHHHHHHHHHHHHHHHhCCCCCcEEEEEeecCh-HHHHHHHhhc---CccEEEEeCCCCcccccccccccccccccc
Q psy4394 143 SEKNLYADIDAAWNTLRTRYGISPENIILYGQSIGT-VPTIDLASRY---QVGAVILHSPLMSGMRVAFPRTKRTWFFDV 218 (286)
Q Consensus 143 ~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg-~~a~~~a~~~---~i~~~v~~~p~~~~~~~~~~~~~~~~~~~~ 218 (286)
...+..+|+..+++++++... +.++..+|.|+|| +++..++.+- .+.+.+.++...+.. .....+...+....
T Consensus 126 yh~G~t~D~~~~l~~l~~~~~--~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~-~~~~~l~~~~s~~l 202 (345)
T COG0429 126 YHSGETEDIRFFLDWLKARFP--PRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLE-ACAYRLDSGFSLRL 202 (345)
T ss_pred ecccchhHHHHHHHHHHHhCC--CCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHH-HHHHHhcCchhhhh
Confidence 446677999999999999764 5699999999999 5555555443 666666665444421 11111111111000
Q ss_pred cchhh-----------------------hc-------------cccccc-------ccCCccccCCCCCCCCCCEEEEec
Q psy4394 219 FPRVI-----------------------FA-------------NVKTPI-------MGLSTLENIDKVPKVTSPVLVIHG 255 (286)
Q Consensus 219 ~~~~~-----------------------~~-------------~~~~~~-------~~~~~~~~~~~~~~i~~Pvlii~G 255 (286)
+.+.+ .. ....+. .-+...+.+..+.+|.+|+||||+
T Consensus 203 y~r~l~~~L~~~~~~kl~~l~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aSs~~~L~~Ir~PtLii~A 282 (345)
T COG0429 203 YSRYLLRNLKRNAARKLKELEPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQASSLPLLPKIRKPTLIINA 282 (345)
T ss_pred hHHHHHHHHHHHHHHHHHhcCcccCcHHHHHHHhhchHHhccceeeecccCCCcHHHHHHhccccccccccccceEEEec
Confidence 00000 00 000111 114455677889999999999999
Q ss_pred CCCCccChhHHHHHHHHCCCCCCceEe
Q psy4394 256 TEDEVIDLSHGIAIYERCPRPVEPLWV 282 (286)
Q Consensus 256 ~~D~~v~~~~~~~l~~~~~~~~~~~~~ 282 (286)
.+|++++++..-+.....+..+.+..-
T Consensus 283 ~DDP~~~~~~iP~~~~~~np~v~l~~t 309 (345)
T COG0429 283 KDDPFMPPEVIPKLQEMLNPNVLLQLT 309 (345)
T ss_pred CCCCCCChhhCCcchhcCCCceEEEee
Confidence 999999998776666544444444433
No 57
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.78 E-value=2.9e-18 Score=147.97 Aligned_cols=196 Identities=20% Similarity=0.276 Sum_probs=120.0
Q ss_pred CCCEEEEEEEeecCCCCeEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCCChhhHHHHHHHH
Q psy4394 75 RGNRLACMFMKCSPNARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSEKNLYADIDAA 154 (286)
Q Consensus 75 ~g~~l~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~~~~~~~d~~~~ 154 (286)
++..+.+... .++..++||++||++++...|......+.. +|+|+++|+ ||||.|........ .+++.+.
T Consensus 117 ~~~~i~~~~~--g~~~~~~vl~~HG~~~~~~~~~~~~~~l~~--~~~v~~~d~-----~g~G~s~~~~~~~~-~~~~~~~ 186 (371)
T PRK14875 117 GGRTVRYLRL--GEGDGTPVVLIHGFGGDLNNWLFNHAALAA--GRPVIALDL-----PGHGASSKAVGAGS-LDELAAA 186 (371)
T ss_pred cCcEEEEecc--cCCCCCeEEEECCCCCccchHHHHHHHHhc--CCEEEEEcC-----CCCCCCCCCCCCCC-HHHHHHH
Confidence 4555544332 224468899999999999999988888864 699999999 99999865433222 2344444
Q ss_pred HHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc--CccEEEEeCCCCccccccccc---c----ccc----ccc-----
Q psy4394 155 WNTLRTRYGISPENIILYGQSIGTVPTIDLASRY--QVGAVILHSPLMSGMRVAFPR---T----KRT----WFF----- 216 (286)
Q Consensus 155 ~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~~~~~~~~~~---~----~~~----~~~----- 216 (286)
+..+.+..+ ..+++++|||+||.+++.+|..+ +++++|+++|........... + ... +..
T Consensus 187 ~~~~~~~~~--~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (371)
T PRK14875 187 VLAFLDALG--IERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEINGDYIDGFVAAESRRELKPVLELLFAD 264 (371)
T ss_pred HHHHHHhcC--CccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCcccchhHHHHhhcccchhHHHHHHHHHhcC
Confidence 444444444 44899999999999999999887 899999998753211100000 0 000 000
Q ss_pred -cccchhh----hcccc-cc------------cc-cCCccccCCCCCCCCCCEEEEecCCCCccChhHHHHHHHHCCCCC
Q psy4394 217 -DVFPRVI----FANVK-TP------------IM-GLSTLENIDKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPRPV 277 (286)
Q Consensus 217 -~~~~~~~----~~~~~-~~------------~~-~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~ 277 (286)
..+.... ..... .. .. .....+....+.++++|+|+++|++|.++|++.++.+. ...
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~~~~l~----~~~ 340 (371)
T PRK14875 265 PALVTRQMVEDLLKYKRLDGVDDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIPAAHAQGLP----DGV 340 (371)
T ss_pred hhhCCHHHHHHHHHHhccccHHHHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCCccCHHHHhhcc----CCC
Confidence 0000000 00000 00 00 00011122345678999999999999999988776543 345
Q ss_pred CceEecCCC
Q psy4394 278 EPLWVEGLS 286 (286)
Q Consensus 278 ~~~~~~ga~ 286 (286)
++.+++++|
T Consensus 341 ~~~~~~~~g 349 (371)
T PRK14875 341 AVHVLPGAG 349 (371)
T ss_pred eEEEeCCCC
Confidence 788888775
No 58
>KOG4667|consensus
Probab=99.78 E-value=6.8e-18 Score=127.39 Aligned_cols=208 Identities=19% Similarity=0.208 Sum_probs=135.1
Q ss_pred ccEEEeccCCCEEEEEEEeecCCCCeEEEEecCCccccch--hhHHHHhhccccceeEEEeeccCcCCCCccCCCCCCC-
Q psy4394 67 EGFFTRTSRGNRLACMFMKCSPNARFTILFSHGNAVDIGQ--MSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPS- 143 (286)
Q Consensus 67 ~~~~~~~~~g~~l~~~~~~~~~~~~p~vv~~HG~~~~~~~--~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~- 143 (286)
+.+.+++..+.++..... ..+...++|++||+.++... +...+..+. +.||.++.+|+ +|.|.|++...
T Consensus 11 ~~ivi~n~~ne~lvg~lh--~tgs~e~vvlcHGfrS~Kn~~~~~~vA~~~e-~~gis~fRfDF-----~GnGeS~gsf~~ 82 (269)
T KOG4667|consen 11 QKIVIPNSRNEKLVGLLH--ETGSTEIVVLCHGFRSHKNAIIMKNVAKALE-KEGISAFRFDF-----SGNGESEGSFYY 82 (269)
T ss_pred eEEEeccCCCchhhccee--ccCCceEEEEeeccccccchHHHHHHHHHHH-hcCceEEEEEe-----cCCCCcCCcccc
Confidence 445555666666665443 34567899999999887643 223344444 66999999999 99999987633
Q ss_pred --hhhHHHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc-CccEEEEeCCCCcccccccccccccccc----
Q psy4394 144 --EKNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY-QVGAVILHSPLMSGMRVAFPRTKRTWFF---- 216 (286)
Q Consensus 144 --~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-~i~~~v~~~p~~~~~~~~~~~~~~~~~~---- 216 (286)
.....+|+..+++++... +..--+++|||-||.+++.++.++ .++-+|-.++-.++....-......++.
T Consensus 83 Gn~~~eadDL~sV~q~~s~~---nr~v~vi~gHSkGg~Vvl~ya~K~~d~~~viNcsGRydl~~~I~eRlg~~~l~~ike 159 (269)
T KOG4667|consen 83 GNYNTEADDLHSVIQYFSNS---NRVVPVILGHSKGGDVVLLYASKYHDIRNVINCSGRYDLKNGINERLGEDYLERIKE 159 (269)
T ss_pred CcccchHHHHHHHHHHhccC---ceEEEEEEeecCccHHHHHHHHhhcCchheEEcccccchhcchhhhhcccHHHHHHh
Confidence 234458999999999774 222347999999999999999998 8888888887776443331111111110
Q ss_pred cccchhhh-----cccccccccCC--ccccCCCCCC--CCCCEEEEecCCCCccChhHHHHHHHHCCCCCCceEecCCC
Q psy4394 217 DVFPRVIF-----ANVKTPIMGLS--TLENIDKVPK--VTSPVLVIHGTEDEVIDLSHGIAIYERCPRPVEPLWVEGLS 286 (286)
Q Consensus 217 ~~~~~~~~-----~~~~~~~~~~~--~~~~~~~~~~--i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~ga~ 286 (286)
.-+..... .........+. ..+..+...+ .+||||-+||..|.+||.+.+.++.+.+++. ++.++|||+
T Consensus 160 ~Gfid~~~rkG~y~~rvt~eSlmdrLntd~h~aclkId~~C~VLTvhGs~D~IVPve~AkefAk~i~nH-~L~iIEgAD 237 (269)
T KOG4667|consen 160 QGFIDVGPRKGKYGYRVTEESLMDRLNTDIHEACLKIDKQCRVLTVHGSEDEIVPVEDAKEFAKIIPNH-KLEIIEGAD 237 (269)
T ss_pred CCceecCcccCCcCceecHHHHHHHHhchhhhhhcCcCccCceEEEeccCCceeechhHHHHHHhccCC-ceEEecCCC
Confidence 00000000 00000000000 0011111122 2699999999999999999999999999995 999999986
No 59
>PRK10162 acetyl esterase; Provisional
Probab=99.77 E-value=1.1e-17 Score=140.84 Aligned_cols=206 Identities=17% Similarity=0.235 Sum_probs=132.7
Q ss_pred cccEEEeccCCCEEEEEEEeecCCCCeEEEEecCCcc---ccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCC
Q psy4394 66 IEGFFTRTSRGNRLACMFMKCSPNARFTILFSHGNAV---DIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRP 142 (286)
Q Consensus 66 ~~~~~~~~~~g~~l~~~~~~~~~~~~p~vv~~HG~~~---~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~ 142 (286)
.+++.+...+| .+...+|.|.....|+||++||++. +...+......++...|+.|+.+|| |.... .
T Consensus 57 ~~~~~i~~~~g-~i~~~~y~P~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdY-----rlape----~ 126 (318)
T PRK10162 57 TRAYMVPTPYG-QVETRLYYPQPDSQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDY-----TLSPE----A 126 (318)
T ss_pred EEEEEEecCCC-ceEEEEECCCCCCCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecC-----CCCCC----C
Confidence 56677777777 5888888886556799999999884 3345666778887667999999999 75332 2
Q ss_pred ChhhHHHHHHHHHHHHHHH---hCCCCCcEEEEEeecChHHHHHHHhhc--------CccEEEEeCCCCccccccc-ccc
Q psy4394 143 SEKNLYADIDAAWNTLRTR---YGISPENIILYGQSIGTVPTIDLASRY--------QVGAVILHSPLMSGMRVAF-PRT 210 (286)
Q Consensus 143 ~~~~~~~d~~~~~~~l~~~---~~~~~~~i~l~G~S~Gg~~a~~~a~~~--------~i~~~v~~~p~~~~~~~~~-~~~ 210 (286)
..+...+|+.++++|+.++ +++++++|+|+|+|+||.+|+.++.+. .++++++++|+.+...... ...
T Consensus 127 ~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~s~~~~ 206 (318)
T PRK10162 127 RFPQAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGLRDSVSRRLL 206 (318)
T ss_pred CCCCcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCCCCChhHHHh
Confidence 3445678999999998764 678889999999999999999888642 5889999999877421100 000
Q ss_pred cccccccccch----hhhccc-ccccccCC-ccccC-CCCCCCCCCEEEEecCCCCccChhHHHHHHHHCCC---CCCce
Q psy4394 211 KRTWFFDVFPR----VIFANV-KTPIMGLS-TLENI-DKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPR---PVEPL 280 (286)
Q Consensus 211 ~~~~~~~~~~~----~~~~~~-~~~~~~~~-~~~~~-~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~---~~~~~ 280 (286)
...+ ..+.. .+.... ........ ..++. ..+.+.-.|+++++|+.|.+.+ +++.+.+++.. .++++
T Consensus 207 ~~~~--~~l~~~~~~~~~~~y~~~~~~~~~p~~~p~~~~l~~~lPp~~i~~g~~D~L~d--e~~~~~~~L~~aGv~v~~~ 282 (318)
T PRK10162 207 GGVW--DGLTQQDLQMYEEAYLSNDADRESPYYCLFNNDLTRDVPPCFIAGAEFDPLLD--DSRLLYQTLAAHQQPCEFK 282 (318)
T ss_pred CCCc--cccCHHHHHHHHHHhCCCccccCCcccCcchhhhhcCCCCeEEEecCCCcCcC--hHHHHHHHHHHcCCCEEEE
Confidence 0000 00100 000000 00000000 00111 1121223699999999999864 67777777644 36788
Q ss_pred EecCC
Q psy4394 281 WVEGL 285 (286)
Q Consensus 281 ~~~ga 285 (286)
.++|.
T Consensus 283 ~~~g~ 287 (318)
T PRK10162 283 LYPGT 287 (318)
T ss_pred EECCC
Confidence 88875
No 60
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.77 E-value=6.3e-18 Score=137.21 Aligned_cols=98 Identities=18% Similarity=0.130 Sum_probs=73.8
Q ss_pred CeEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCCChhhHHHHHHHHHHHHHHHhCCCCCcEE
Q psy4394 91 RFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSEKNLYADIDAAWNTLRTRYGISPENII 170 (286)
Q Consensus 91 ~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~ 170 (286)
+|+||++||++++...|..++..+ + +|+|+++|+ ||||.|..... ..+ ++..+.+..+.++.++ ++++
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l--~-~~~vi~~D~-----~G~G~S~~~~~-~~~-~~~~~~l~~~l~~~~~--~~~~ 69 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEAL--P-DYPRLYIDL-----PGHGGSAAISV-DGF-ADVSRLLSQTLQSYNI--LPYW 69 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHc--C-CCCEEEecC-----CCCCCCCCccc-cCH-HHHHHHHHHHHHHcCC--CCeE
Confidence 467999999999999999888876 3 699999999 99999875432 122 2222222222233343 4999
Q ss_pred EEEeecChHHHHHHHhhc---CccEEEEeCCCC
Q psy4394 171 LYGQSIGTVPTIDLASRY---QVGAVILHSPLM 200 (286)
Q Consensus 171 l~G~S~Gg~~a~~~a~~~---~i~~~v~~~p~~ 200 (286)
++||||||.+|+.+|.++ +++++++.++..
T Consensus 70 lvG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~~ 102 (242)
T PRK11126 70 LVGYSLGGRIAMYYACQGLAGGLCGLIVEGGNP 102 (242)
T ss_pred EEEECHHHHHHHHHHHhCCcccccEEEEeCCCC
Confidence 999999999999999987 499999987654
No 61
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.77 E-value=1.1e-17 Score=135.92 Aligned_cols=126 Identities=21% Similarity=0.342 Sum_probs=96.3
Q ss_pred cEEEeccCCCEEEEEEEee-cCCCCeEEEEecCCccccc----hhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCC
Q psy4394 68 GFFTRTSRGNRLACMFMKC-SPNARFTILFSHGNAVDIG----QMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRP 142 (286)
Q Consensus 68 ~~~~~~~~g~~l~~~~~~~-~~~~~p~vv~~HG~~~~~~----~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~ 142 (286)
.+++++..|.. .++++.| .++++++||++||++++.. .|..+...++ +.||.|+++|+ ||||.|.+..
T Consensus 2 ~~~l~~~~g~~-~~~~~~p~~~~~~~~VlllHG~g~~~~~~~~~~~~la~~La-~~Gy~Vl~~Dl-----~G~G~S~g~~ 74 (266)
T TIGR03101 2 PFFLDAPHGFR-FCLYHPPVAVGPRGVVIYLPPFAEEMNKSRRMVALQARAFA-AGGFGVLQIDL-----YGCGDSAGDF 74 (266)
T ss_pred CEEecCCCCcE-EEEEecCCCCCCceEEEEECCCcccccchhHHHHHHHHHHH-HCCCEEEEECC-----CCCCCCCCcc
Confidence 35666666654 4555555 3445789999999886543 3444556666 45999999999 9999997643
Q ss_pred ---ChhhHHHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc--CccEEEEeCCCCccc
Q psy4394 143 ---SEKNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY--QVGAVILHSPLMSGM 203 (286)
Q Consensus 143 ---~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~~~~ 203 (286)
....+.+|+.++++++++. + .++++++||||||.+++.++.++ .++++|+++|+.++.
T Consensus 75 ~~~~~~~~~~Dv~~ai~~L~~~-~--~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~g~ 137 (266)
T TIGR03101 75 AAARWDVWKEDVAAAYRWLIEQ-G--HPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVSGK 137 (266)
T ss_pred ccCCHHHHHHHHHHHHHHHHhc-C--CCCEEEEEECHHHHHHHHHHHhCccccceEEEeccccchH
Confidence 3455678999999999875 3 35999999999999999999887 889999999988754
No 62
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.77 E-value=2.8e-17 Score=135.75 Aligned_cols=198 Identities=15% Similarity=0.180 Sum_probs=120.5
Q ss_pred CCCEEEEEEEeec---CCCCeEEEEecCCccccchhhH--HHHhhccccceeEEEeeccCcCCCCccCCCCC--------
Q psy4394 75 RGNRLACMFMKCS---PNARFTILFSHGNAVDIGQMSS--FFTGLGSRINCNIFSYDYSGYDYSGYGISTGR-------- 141 (286)
Q Consensus 75 ~g~~l~~~~~~~~---~~~~p~vv~~HG~~~~~~~~~~--~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~-------- 141 (286)
.+..+.+.++.|. .++.|+|+++||.+++...|.. .+..++.+.|+.|+++|.. ++|+|.+...
T Consensus 23 ~~~~~~~~v~~P~~~~~~~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~---~~g~~~~~~~~~w~~g~~ 99 (275)
T TIGR02821 23 CGVPMTFGVFLPPQAAAGPVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTS---PRGTGIAGEDDAWDFGKG 99 (275)
T ss_pred cCCceEEEEEcCCCccCCCCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCC---CCcCCCCCCcccccccCC
Confidence 4667778777763 3467999999999987766643 3456666669999999971 1333322100
Q ss_pred ----------CC--hhhHHHHH-HHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc--CccEEEEeCCCCcccccc
Q psy4394 142 ----------PS--EKNLYADI-DAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY--QVGAVILHSPLMSGMRVA 206 (286)
Q Consensus 142 ----------~~--~~~~~~d~-~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~~~~~~~ 206 (286)
+. .......+ .++...+.+.++++.++++++||||||++|+.++.++ .++++++++|+.+.....
T Consensus 100 ~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~~~ 179 (275)
T TIGR02821 100 AGFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIVAPSRCP 179 (275)
T ss_pred ccccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCccCcccCc
Confidence 00 01122332 3334445555677888999999999999999999987 889999999987632110
Q ss_pred cccccccccccccchhhhcccccccccCCccccCCCCC--CCCCCEEEEecCCCCccCh-hHHHHHHHHCC---CCCCce
Q psy4394 207 FPRTKRTWFFDVFPRVIFANVKTPIMGLSTLENIDKVP--KVTSPVLVIHGTEDEVIDL-SHGIAIYERCP---RPVEPL 280 (286)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~i~~Pvlii~G~~D~~v~~-~~~~~l~~~~~---~~~~~~ 280 (286)
+....+...+ .. ........++...+. ....|+++.||+.|+.++. .++..+.+.+. .+.++.
T Consensus 180 -------~~~~~~~~~l-~~---~~~~~~~~~~~~~~~~~~~~~plli~~G~~D~~v~~~~~~~~~~~~l~~~g~~v~~~ 248 (275)
T TIGR02821 180 -------WGQKAFSAYL-GA---DEAAWRSYDASLLVADGGRHSTILIDQGTADQFLDEQLRPDAFEQACRAAGQALTLR 248 (275)
T ss_pred -------chHHHHHHHh-cc---cccchhhcchHHHHhhcccCCCeeEeecCCCcccCccccHHHHHHHHHHcCCCeEEE
Confidence 0000111111 00 000111111222111 2467999999999999998 45556655553 336777
Q ss_pred EecCCC
Q psy4394 281 WVEGLS 286 (286)
Q Consensus 281 ~~~ga~ 286 (286)
.+||++
T Consensus 249 ~~~g~~ 254 (275)
T TIGR02821 249 RQAGYD 254 (275)
T ss_pred EeCCCC
Confidence 888754
No 63
>KOG2100|consensus
Probab=99.76 E-value=1e-17 Score=154.08 Aligned_cols=211 Identities=12% Similarity=0.045 Sum_probs=149.1
Q ss_pred cccCCccccEEEeccCCCEEEEEEEee----cCCCCeEEEEecCCccccc----hhhHHHHhhccccceeEEEeeccCcC
Q psy4394 60 DNERSNIEGFFTRTSRGNRLACMFMKC----SPNARFTILFSHGNAVDIG----QMSSFFTGLGSRINCNIFSYDYSGYD 131 (286)
Q Consensus 60 ~~~~~~~~~~~~~~~~g~~l~~~~~~~----~~~~~p~vv~~HG~~~~~~----~~~~~~~~l~~~~g~~vi~~d~~~~~ 131 (286)
....+..+...+.. +|....+.+..| ..++.|+++.+||++++.. ....+...++...|+.|+.+|+
T Consensus 492 ~~~~p~~~~~~i~~-~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~---- 566 (755)
T KOG2100|consen 492 NVALPIVEFGKIEI-DGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDG---- 566 (755)
T ss_pred cccCCcceeEEEEe-ccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcC----
Confidence 34445555555544 888888888877 2456799999999997431 2223444455577999999999
Q ss_pred CCCccCCCCCC-----Chh--hHHHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc---CccEEEEeCCCCc
Q psy4394 132 YSGYGISTGRP-----SEK--NLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY---QVGAVILHSPLMS 201 (286)
Q Consensus 132 ~~G~G~s~~~~-----~~~--~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~---~i~~~v~~~p~~~ 201 (286)
||.|...... ..- ...+|...+++++.+...+|.+++.++|+|+||++++.++... -+++.++++|+++
T Consensus 567 -RGs~~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd 645 (755)
T KOG2100|consen 567 -RGSGGYGWDFRSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTD 645 (755)
T ss_pred -CCcCCcchhHHHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceee
Confidence 6655444331 111 2358999999999999899999999999999999999998887 4566699999998
Q ss_pred ccccccccccccccccccchhhhcccccccccCCccccCCCCCCCCCCE-EEEecCCCCccChhHHHHHHHHCCCC---C
Q psy4394 202 GMRVAFPRTKRTWFFDVFPRVIFANVKTPIMGLSTLENIDKVPKVTSPV-LVIHGTEDEVIDLSHGIAIYERCPRP---V 277 (286)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pv-lii~G~~D~~v~~~~~~~l~~~~~~~---~ 277 (286)
.. .........+ ..........+.+.+....+..++.|. |++||+.|..|+++++.+++++++.. .
T Consensus 646 ~~-~yds~~tery---------mg~p~~~~~~y~e~~~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~ 715 (755)
T KOG2100|consen 646 WL-YYDSTYTERY---------MGLPSENDKGYEESSVSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPF 715 (755)
T ss_pred ee-eecccccHhh---------cCCCccccchhhhccccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCce
Confidence 33 3222222222 112222222344555667777777776 99999999999999999999988654 6
Q ss_pred CceEecCCC
Q psy4394 278 EPLWVEGLS 286 (286)
Q Consensus 278 ~~~~~~ga~ 286 (286)
+++++|+.+
T Consensus 716 ~~~vypde~ 724 (755)
T KOG2100|consen 716 RLLVYPDEN 724 (755)
T ss_pred EEEEeCCCC
Confidence 888888864
No 64
>PLN02442 S-formylglutathione hydrolase
Probab=99.76 E-value=9.1e-17 Score=133.06 Aligned_cols=199 Identities=13% Similarity=0.189 Sum_probs=119.3
Q ss_pred CCCEEEEEEEeec---CCCCeEEEEecCCccccchhhHH--HHhhccccceeEEEeeccCcCCCCcc-----CCC-----
Q psy4394 75 RGNRLACMFMKCS---PNARFTILFSHGNAVDIGQMSSF--FTGLGSRINCNIFSYDYSGYDYSGYG-----IST----- 139 (286)
Q Consensus 75 ~g~~l~~~~~~~~---~~~~p~vv~~HG~~~~~~~~~~~--~~~l~~~~g~~vi~~d~~~~~~~G~G-----~s~----- 139 (286)
-|..+.+.++.|. +++.|+|+++||++++...|... +..+....|+.|+.+|. .++| .+.
T Consensus 28 l~~~~~~~vy~P~~~~~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~-----~~~g~~~~~~~~~~~~~ 102 (283)
T PLN02442 28 LGCSMTFSVYFPPASDSGKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDT-----SPRGLNVEGEADSWDFG 102 (283)
T ss_pred cCCceEEEEEcCCcccCCCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCC-----CCCCCCCCCCccccccC
Confidence 4667888777663 34679999999988876554322 23444456999999998 5444 110
Q ss_pred -CC-----CChh-----hHHH-HHHHHHHHHHHHh-CCCCCcEEEEEeecChHHHHHHHhhc--CccEEEEeCCCCcccc
Q psy4394 140 -GR-----PSEK-----NLYA-DIDAAWNTLRTRY-GISPENIILYGQSIGTVPTIDLASRY--QVGAVILHSPLMSGMR 204 (286)
Q Consensus 140 -~~-----~~~~-----~~~~-d~~~~~~~l~~~~-~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~~~~~ 204 (286)
+. .... ...+ ...++.+++.+.+ .++.++++++|+||||++|+.++.++ .++++++.+|..+...
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~ 182 (283)
T PLN02442 103 VGAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIANPIN 182 (283)
T ss_pred CCcceeeccccCCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccCccc
Confidence 00 0000 1111 1223333444432 24677999999999999999999988 8899999999876221
Q ss_pred cccccccccccccccchhhhcccccccccCCccccCCCCCCCCCCEEEEecCCCCccChh-HHHHHHHHC---CCCCCce
Q psy4394 205 VAFPRTKRTWFFDVFPRVIFANVKTPIMGLSTLENIDKVPKVTSPVLVIHGTEDEVIDLS-HGIAIYERC---PRPVEPL 280 (286)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~-~~~~l~~~~---~~~~~~~ 280 (286)
.... ...+... ..........+...+++..+.+.++|++++||++|+.++.. +++.+++.+ +.+.++.
T Consensus 183 ~~~~-------~~~~~~~-~g~~~~~~~~~d~~~~~~~~~~~~~pvli~~G~~D~~v~~~~~s~~~~~~l~~~g~~~~~~ 254 (283)
T PLN02442 183 CPWG-------QKAFTNY-LGSDKADWEEYDATELVSKFNDVSATILIDQGEADKFLKEQLLPENFEEACKEAGAPVTLR 254 (283)
T ss_pred Cchh-------hHHHHHH-cCCChhhHHHcChhhhhhhccccCCCEEEEECCCCccccccccHHHHHHHHHHcCCCeEEE
Confidence 1000 0001111 11111112222333344555667899999999999999973 355555444 4446788
Q ss_pred EecCCC
Q psy4394 281 WVEGLS 286 (286)
Q Consensus 281 ~~~ga~ 286 (286)
++||++
T Consensus 255 ~~pg~~ 260 (283)
T PLN02442 255 LQPGYD 260 (283)
T ss_pred EeCCCC
Confidence 888864
No 65
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.76 E-value=8.3e-18 Score=134.35 Aligned_cols=169 Identities=21% Similarity=0.231 Sum_probs=115.6
Q ss_pred EEEEEEeecCC-CCeEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCCC-C------------Ch
Q psy4394 79 LACMFMKCSPN-ARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGR-P------------SE 144 (286)
Q Consensus 79 l~~~~~~~~~~-~~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~-~------------~~ 144 (286)
+.+++..|.+. +.|.||++|+..+-..........+++ .||.|+++|+.. |.+..... . ..
T Consensus 1 ~~ay~~~P~~~~~~~~Vvv~~d~~G~~~~~~~~ad~lA~-~Gy~v~~pD~f~----~~~~~~~~~~~~~~~~~~~~~~~~ 75 (218)
T PF01738_consen 1 IDAYVARPEGGGPRPAVVVIHDIFGLNPNIRDLADRLAE-EGYVVLAPDLFG----GRGAPPSDPEEAFAAMRELFAPRP 75 (218)
T ss_dssp EEEEEEEETTSSSEEEEEEE-BTTBS-HHHHHHHHHHHH-TT-EEEEE-CCC----CTS--CCCHHCHHHHHHHCHHHSH
T ss_pred CeEEEEeCCCCCCCCEEEEEcCCCCCchHHHHHHHHHHh-cCCCEEeccccc----CCCCCccchhhHHHHHHHHHhhhH
Confidence 35677777654 789999999987766666677888885 499999999822 22201111 0 11
Q ss_pred hhHHHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc-CccEEEEeCCCCcccccccccccccccccccchhh
Q psy4394 145 KNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY-QVGAVILHSPLMSGMRVAFPRTKRTWFFDVFPRVI 223 (286)
Q Consensus 145 ~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-~i~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (286)
....+|+.+++++++++..++.++|.++|+|+||.+++.++.+. .+++++...|.... ..
T Consensus 76 ~~~~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~~~~~a~v~~yg~~~~----------------~~--- 136 (218)
T PF01738_consen 76 EQVAADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARDPRVDAAVSFYGGSPP----------------PP--- 136 (218)
T ss_dssp HHHHHHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCTTTSSEEEEES-SSSG----------------GG---
T ss_pred HHHHHHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhhhccccceEEEEcCCCCC----------------Cc---
Confidence 23457888999999998767778999999999999999999988 89999998881110 00
Q ss_pred hcccccccccCCccccCCCCCCCCCCEEEEecCCCCccChhHHHHHHHHC---CCCCCceEecCCC
Q psy4394 224 FANVKTPIMGLSTLENIDKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERC---PRPVEPLWVEGLS 286 (286)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~---~~~~~~~~~~ga~ 286 (286)
......++++|+++++|++|+.++.+..+++.+.+ +...++.+|+|++
T Consensus 137 ---------------~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~ 187 (218)
T PF01738_consen 137 ---------------PLEDAPKIKAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAG 187 (218)
T ss_dssp ---------------HHHHGGG--S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--
T ss_pred ---------------chhhhcccCCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCc
Confidence 22345567899999999999999999888888777 3346888999864
No 66
>KOG1838|consensus
Probab=99.75 E-value=3.2e-17 Score=137.11 Aligned_cols=197 Identities=13% Similarity=0.119 Sum_probs=131.6
Q ss_pred ccCCccccEEEeccCCCEEEEEEEeec-C------CCCeEEEEecCCcccc-chhhHHHHhhccccceeEEEeeccCcCC
Q psy4394 61 NERSNIEGFFTRTSRGNRLACMFMKCS-P------NARFTILFSHGNAVDI-GQMSSFFTGLGSRINCNIFSYDYSGYDY 132 (286)
Q Consensus 61 ~~~~~~~~~~~~~~~g~~l~~~~~~~~-~------~~~p~vv~~HG~~~~~-~~~~~~~~~l~~~~g~~vi~~d~~~~~~ 132 (286)
......++..++++||-.+...++.+. . ...|+||++||..+++ +.+...+...+.+.||++++++.
T Consensus 88 ~p~~~y~Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~----- 162 (409)
T KOG1838|consen 88 KPPVEYTREIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNH----- 162 (409)
T ss_pred CCCCcceeEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECC-----
Confidence 344456777788999999998887542 2 3569999999976544 55666666666677999999999
Q ss_pred CCccCCCCC---CChhhHHHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc----CccEEE-EeCCCCcc-c
Q psy4394 133 SGYGISTGR---PSEKNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY----QVGAVI-LHSPLMSG-M 203 (286)
Q Consensus 133 ~G~G~s~~~---~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~----~i~~~v-~~~p~~~~-~ 203 (286)
||+|.+.-. ....++.+|+.++++++++++. ..+++.+|+||||.+...+..+. .+.+.+ +.+|+.-. .
T Consensus 163 RG~~g~~LtTpr~f~ag~t~Dl~~~v~~i~~~~P--~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~ 240 (409)
T KOG1838|consen 163 RGLGGSKLTTPRLFTAGWTEDLREVVNHIKKRYP--QAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAA 240 (409)
T ss_pred CCCCCCccCCCceeecCCHHHHHHHHHHHHHhCC--CCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhhh
Confidence 998887643 3345677999999999999984 45899999999999999998876 454444 44554321 0
Q ss_pred ccccccccccc-cccc----cch--------------------------hhhccccc-------ccccCCccccCCCCCC
Q psy4394 204 RVAFPRTKRTW-FFDV----FPR--------------------------VIFANVKT-------PIMGLSTLENIDKVPK 245 (286)
Q Consensus 204 ~~~~~~~~~~~-~~~~----~~~--------------------------~~~~~~~~-------~~~~~~~~~~~~~~~~ 245 (286)
...+......+ +... +.+ .+...... ...-+...+..+.+.+
T Consensus 241 ~~~~~~~~~~~~y~~~l~~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~~~deYY~~aSs~~~v~~ 320 (409)
T KOG1838|consen 241 SRSIETPLYRRFYNRALTLNLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMFGFKSVDEYYKKASSSNYVDK 320 (409)
T ss_pred hhHHhcccchHHHHHHHHHhHHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcCCCcHHHHHhhcchhhhccc
Confidence 00000000000 0000 000 00000000 1112455567788999
Q ss_pred CCCCEEEEecCCCCccChh
Q psy4394 246 VTSPVLVIHGTEDEVIDLS 264 (286)
Q Consensus 246 i~~Pvlii~G~~D~~v~~~ 264 (286)
|++|+|+|++.+|+++|.+
T Consensus 321 I~VP~L~ina~DDPv~p~~ 339 (409)
T KOG1838|consen 321 IKVPLLCINAADDPVVPEE 339 (409)
T ss_pred ccccEEEEecCCCCCCCcc
Confidence 9999999999999999986
No 67
>PLN02872 triacylglycerol lipase
Probab=99.75 E-value=1e-17 Score=143.69 Aligned_cols=129 Identities=19% Similarity=0.134 Sum_probs=93.9
Q ss_pred CCccccEEEeccCCCEEEEEEEeecC-----CCCeEEEEecCCccccchhh------HHHHhhccccceeEEEeeccCcC
Q psy4394 63 RSNIEGFFTRTSRGNRLACMFMKCSP-----NARFTILFSHGNAVDIGQMS------SFFTGLGSRINCNIFSYDYSGYD 131 (286)
Q Consensus 63 ~~~~~~~~~~~~~g~~l~~~~~~~~~-----~~~p~vv~~HG~~~~~~~~~------~~~~~l~~~~g~~vi~~d~~~~~ 131 (286)
-.+.|+..++|.||..|..+.+++.. .++|+|+++||...+...|. .....++ +.||+|+++|.
T Consensus 41 gy~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La-~~GydV~l~n~---- 115 (395)
T PLN02872 41 GYSCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILA-DHGFDVWVGNV---- 115 (395)
T ss_pred CCCceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHH-hCCCCcccccc----
Confidence 34578888999999999988875421 24688999999987766553 2223344 45999999999
Q ss_pred CCCccCCCCC------------CChhhHH-HHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc----CccEEE
Q psy4394 132 YSGYGISTGR------------PSEKNLY-ADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY----QVGAVI 194 (286)
Q Consensus 132 ~~G~G~s~~~------------~~~~~~~-~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~----~i~~~v 194 (286)
||++.+.+. .+..+.. .|+.++++++.+.. .++++++|||+||.+++.++.+. .|++++
T Consensus 116 -RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~---~~~v~~VGhS~Gg~~~~~~~~~p~~~~~v~~~~ 191 (395)
T PLN02872 116 -RGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSIT---NSKIFIVGHSQGTIMSLAALTQPNVVEMVEAAA 191 (395)
T ss_pred -cccccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhcc---CCceEEEEECHHHHHHHHHhhChHHHHHHHHHH
Confidence 887755321 1222333 79999999998753 35999999999999998666432 677888
Q ss_pred EeCCCC
Q psy4394 195 LHSPLM 200 (286)
Q Consensus 195 ~~~p~~ 200 (286)
+++|..
T Consensus 192 ~l~P~~ 197 (395)
T PLN02872 192 LLCPIS 197 (395)
T ss_pred Hhcchh
Confidence 888764
No 68
>PLN00021 chlorophyllase
Probab=99.75 E-value=1.3e-16 Score=133.00 Aligned_cols=176 Identities=15% Similarity=0.129 Sum_probs=121.1
Q ss_pred CEEEEEEEee-cCCCCeEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCCChhhHHHHHHHHH
Q psy4394 77 NRLACMFMKC-SPNARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSEKNLYADIDAAW 155 (286)
Q Consensus 77 ~~l~~~~~~~-~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~~~~~~~d~~~~~ 155 (286)
..+.+.++.| ..+..|+||++||++.+...|...+..++++ ||.|+++|+ +|++... .....+|..+++
T Consensus 37 ~~~p~~v~~P~~~g~~PvVv~lHG~~~~~~~y~~l~~~Las~-G~~VvapD~-----~g~~~~~----~~~~i~d~~~~~ 106 (313)
T PLN00021 37 PPKPLLVATPSEAGTYPVLLFLHGYLLYNSFYSQLLQHIASH-GFIVVAPQL-----YTLAGPD----GTDEIKDAAAVI 106 (313)
T ss_pred CCceEEEEeCCCCCCCCEEEEECCCCCCcccHHHHHHHHHhC-CCEEEEecC-----CCcCCCC----chhhHHHHHHHH
Confidence 3456666666 3456799999999999888888888888754 999999999 7754322 122345677778
Q ss_pred HHHHHHh--------CCCCCcEEEEEeecChHHHHHHHhhc-------CccEEEEeCCCCcccccccccccccccccccc
Q psy4394 156 NTLRTRY--------GISPENIILYGQSIGTVPTIDLASRY-------QVGAVILHSPLMSGMRVAFPRTKRTWFFDVFP 220 (286)
Q Consensus 156 ~~l~~~~--------~~~~~~i~l~G~S~Gg~~a~~~a~~~-------~i~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~ 220 (286)
+|+.+.. .++.++++++|||+||.+|+.+|..+ +++++|++.|+....... ...... +.
T Consensus 107 ~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g~~~~~--~~~p~i----l~ 180 (313)
T PLN00021 107 NWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDGTSKGK--QTPPPV----LT 180 (313)
T ss_pred HHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeecccccccccc--CCCCcc----cc
Confidence 8877532 24557999999999999999999775 578999999876421000 000000 00
Q ss_pred hhhhcccccccccCCccccCCCCCCCCCCEEEEecCCCC-----c----cChh-HHHHHHHHCCCCCCceEecCCC
Q psy4394 221 RVIFANVKTPIMGLSTLENIDKVPKVTSPVLVIHGTEDE-----V----IDLS-HGIAIYERCPRPVEPLWVEGLS 286 (286)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~-----~----v~~~-~~~~l~~~~~~~~~~~~~~ga~ 286 (286)
......++.+|+|++++..|. . .|.. +-.++++.++.++.+.+++++|
T Consensus 181 ------------------~~~~s~~~~~P~liig~g~~~~~~~~~~p~~ap~~~~~~~f~~~~~~~~~~~~~~~~g 238 (313)
T PLN00021 181 ------------------YAPHSFNLDIPVLVIGTGLGGEPRNPLFPPCAPDGVNHAEFFNECKAPAVHFVAKDYG 238 (313)
T ss_pred ------------------cCcccccCCCCeEEEecCCCcccccccccccCCCCCCHHHHHHhcCCCeeeeeecCCC
Confidence 111223368999999999763 2 2344 4488999998887777777764
No 69
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.74 E-value=5e-17 Score=139.02 Aligned_cols=103 Identities=13% Similarity=0.119 Sum_probs=82.1
Q ss_pred CeEEEEecCCcccc-----chhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCCChhhHH-HHHHHHHHHHHHHhCC
Q psy4394 91 RFTILFSHGNAVDI-----GQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSEKNLY-ADIDAAWNTLRTRYGI 164 (286)
Q Consensus 91 ~p~vv~~HG~~~~~-----~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~~~~~~-~d~~~~~~~l~~~~~~ 164 (286)
++.||++||...+. ..+..++..+.+ .||+|+++|+ +|+|.+....+..++. +|+.++++++.++.+.
T Consensus 62 ~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~-~G~~V~~~D~-----~g~g~s~~~~~~~d~~~~~~~~~v~~l~~~~~~ 135 (350)
T TIGR01836 62 KTPLLIVYALVNRPYMLDLQEDRSLVRGLLE-RGQDVYLIDW-----GYPDRADRYLTLDDYINGYIDKCVDYICRTSKL 135 (350)
T ss_pred CCcEEEeccccccceeccCCCCchHHHHHHH-CCCeEEEEeC-----CCCCHHHhcCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 45699999965332 223567777774 5999999999 9999877666666665 4588999999998764
Q ss_pred CCCcEEEEEeecChHHHHHHHhhc--CccEEEEeCCCCc
Q psy4394 165 SPENIILYGQSIGTVPTIDLASRY--QVGAVILHSPLMS 201 (286)
Q Consensus 165 ~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~~ 201 (286)
+ +++++||||||.+++.++..+ +++++|+++|..+
T Consensus 136 ~--~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~ 172 (350)
T TIGR01836 136 D--QISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVD 172 (350)
T ss_pred C--cccEEEECHHHHHHHHHHHhCchheeeEEEeccccc
Confidence 4 999999999999999998877 7999999988765
No 70
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.73 E-value=4e-16 Score=125.08 Aligned_cols=181 Identities=18% Similarity=0.139 Sum_probs=137.4
Q ss_pred cEEEeccCCCEEEEEEEeecCCC-CeEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCCC-----
Q psy4394 68 GFFTRTSRGNRLACMFMKCSPNA-RFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGR----- 141 (286)
Q Consensus 68 ~~~~~~~~g~~l~~~~~~~~~~~-~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~----- 141 (286)
.+.+.+.+ ..+.+++..|.... .|.||++|+..+-........+.++. .||.|+++|+.....+........
T Consensus 4 ~v~~~~~~-~~~~~~~a~P~~~~~~P~VIv~hei~Gl~~~i~~~a~rlA~-~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~ 81 (236)
T COG0412 4 DVTIPAPD-GELPAYLARPAGAGGFPGVIVLHEIFGLNPHIRDVARRLAK-AGYVVLAPDLYGRQGDPTDIEDEPAELET 81 (236)
T ss_pred ceEeeCCC-ceEeEEEecCCcCCCCCEEEEEecccCCchHHHHHHHHHHh-CCcEEEechhhccCCCCCcccccHHHHhh
Confidence 45565655 78899988885443 49999999988877788888999985 499999999954322222111100
Q ss_pred -----CChhhHHHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc-CccEEEEeCCCCccccccccccccccc
Q psy4394 142 -----PSEKNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY-QVGAVILHSPLMSGMRVAFPRTKRTWF 215 (286)
Q Consensus 142 -----~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-~i~~~v~~~p~~~~~~~~~~~~~~~~~ 215 (286)
........|+.+.++|+..+...+.++|+++|+||||.+++.++... ++++.++..|..-..
T Consensus 82 ~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~~v~a~v~fyg~~~~~------------ 149 (236)
T COG0412 82 GLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAPEVKAAVAFYGGLIAD------------ 149 (236)
T ss_pred hhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccCCccEEEEecCCCCCC------------
Confidence 11245568999999999998767788999999999999999999998 899999887643200
Q ss_pred ccccchhhhcccccccccCCccccCCCCCCCCCCEEEEecCCCCccChhHHHHHHHHCCCC---CCceEecCC
Q psy4394 216 FDVFPRVIFANVKTPIMGLSTLENIDKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPRP---VEPLWVEGL 285 (286)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~---~~~~~~~ga 285 (286)
......++++|+|+.+|+.|..+|.+....+.+.+... +++.+++++
T Consensus 150 -----------------------~~~~~~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga 199 (236)
T COG0412 150 -----------------------DTADAPKIKVPVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYPGA 199 (236)
T ss_pred -----------------------cccccccccCcEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeCCC
Confidence 12235688999999999999999999888888877554 567777775
No 71
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.73 E-value=1.9e-17 Score=141.75 Aligned_cols=120 Identities=17% Similarity=0.174 Sum_probs=82.0
Q ss_pred ccCCCEEEEEEEeec-CCCCeEEEEecCCccccc-----------hhhHHHH---hhccccceeEEEeeccCcCCCC--c
Q psy4394 73 TSRGNRLACMFMKCS-PNARFTILFSHGNAVDIG-----------QMSSFFT---GLGSRINCNIFSYDYSGYDYSG--Y 135 (286)
Q Consensus 73 ~~~g~~l~~~~~~~~-~~~~p~vv~~HG~~~~~~-----------~~~~~~~---~l~~~~g~~vi~~d~~~~~~~G--~ 135 (286)
+.+|.++++..+.+. ....+.||++||.+++.. .|..++. .+. ..+|.|+++|+ || +
T Consensus 12 ~~~~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~-~~~~~vi~~D~-----~G~~~ 85 (351)
T TIGR01392 12 VLSDVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAID-TDRYFVVCSNV-----LGGCY 85 (351)
T ss_pred ccCCceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcC-CCceEEEEecC-----CCCCC
Confidence 346777888877542 234578999999988652 2444431 333 34899999999 99 5
Q ss_pred cCCCCCC----C-------hhhHHHHHHHHHHHHHHHhCCCCCc-EEEEEeecChHHHHHHHhhc--CccEEEEeCCCC
Q psy4394 136 GISTGRP----S-------EKNLYADIDAAWNTLRTRYGISPEN-IILYGQSIGTVPTIDLASRY--QVGAVILHSPLM 200 (286)
Q Consensus 136 G~s~~~~----~-------~~~~~~d~~~~~~~l~~~~~~~~~~-i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~ 200 (286)
|.|.... . .....+|..+.+..+.++++++ + ++++||||||.+++.++.++ +++++|++++..
T Consensus 86 g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 162 (351)
T TIGR01392 86 GSTGPSSINPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIE--QIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSA 162 (351)
T ss_pred CCCCCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCC--CceEEEEECHHHHHHHHHHHHChHhhheEEEEccCC
Confidence 5544210 0 0122355555555555666665 7 99999999999999999988 899999998754
No 72
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.72 E-value=1.7e-16 Score=135.40 Aligned_cols=198 Identities=16% Similarity=0.178 Sum_probs=114.2
Q ss_pred CCCEEEEEEEeecCCCCeEEEEecCCccccc------------hhhHHHH---hhccccceeEEEeeccCcCCCCccCCC
Q psy4394 75 RGNRLACMFMKCSPNARFTILFSHGNAVDIG------------QMSSFFT---GLGSRINCNIFSYDYSGYDYSGYGIST 139 (286)
Q Consensus 75 ~g~~l~~~~~~~~~~~~p~vv~~HG~~~~~~------------~~~~~~~---~l~~~~g~~vi~~d~~~~~~~G~G~s~ 139 (286)
+|.++.+....+ ...| +|++||+.++.. .|..++. .+..+ +|+|+++|+ ||+|.|.
T Consensus 44 ~~~~l~y~~~G~--~~~p-~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~-~~~Vi~~Dl-----~G~g~s~ 114 (343)
T PRK08775 44 EDLRLRYELIGP--AGAP-VVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPA-RFRLLAFDF-----IGADGSL 114 (343)
T ss_pred CCceEEEEEecc--CCCC-EEEEecCCCcccccccccCCCCCCcchhccCCCCccCcc-ccEEEEEeC-----CCCCCCC
Confidence 667777665532 2335 555555554433 4555664 34323 799999999 9999775
Q ss_pred CCC-ChhhHHHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc--CccEEEEeCCCCcccccc--cc----c-
Q psy4394 140 GRP-SEKNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY--QVGAVILHSPLMSGMRVA--FP----R- 209 (286)
Q Consensus 140 ~~~-~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~~~~~~~--~~----~- 209 (286)
... +.....+|+.+++ +..+++ +.++|+||||||++|+.+|.++ +++++|++++........ .. .
T Consensus 115 ~~~~~~~~~a~dl~~ll----~~l~l~-~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~~~~~~~~~~~~~~ 189 (343)
T PRK08775 115 DVPIDTADQADAIALLL----DALGIA-RLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAHPYAAAWRALQRRA 189 (343)
T ss_pred CCCCCHHHHHHHHHHHH----HHcCCC-cceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCCHHHHHHHHHHHHH
Confidence 331 2233334444433 344544 2357999999999999999998 999999998754211000 00 0
Q ss_pred --cccc------------------ccc-cccchhhhcccc-------cc-----------c-c--------cCC-ccc-c
Q psy4394 210 --TKRT------------------WFF-DVFPRVIFANVK-------TP-----------I-M--------GLS-TLE-N 239 (286)
Q Consensus 210 --~~~~------------------~~~-~~~~~~~~~~~~-------~~-----------~-~--------~~~-~~~-~ 239 (286)
.... +.. ..+...+..... .. . . ... ..+ .
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (343)
T PRK08775 190 VALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYVARTPVNAYLRLSESIDLH 269 (343)
T ss_pred HHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHHHHhcChhHHHHHHHHHhhc
Confidence 0000 000 000000000000 00 0 0 000 000 1
Q ss_pred CCCCCCCCCCEEEEecCCCCccChhHHHHHHHHCCCCCCceEecC-CC
Q psy4394 240 IDKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPRPVEPLWVEG-LS 286 (286)
Q Consensus 240 ~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~g-a~ 286 (286)
...+.++++|+|+++|++|.++|++.++++.+.+....+++++++ +|
T Consensus 270 ~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~a~l~~i~~~aG 317 (343)
T PRK08775 270 RVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLGPRGSLRVLRSPYG 317 (343)
T ss_pred CCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCCCCeEEEEeCCcc
Confidence 123578899999999999999999999999998854458899984 54
No 73
>PRK05855 short chain dehydrogenase; Validated
Probab=99.71 E-value=8.7e-17 Score=146.79 Aligned_cols=102 Identities=21% Similarity=0.245 Sum_probs=78.9
Q ss_pred ccCCCEEEEEEEeecCCCCeEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCC-----ChhhH
Q psy4394 73 TSRGNRLACMFMKCSPNARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRP-----SEKNL 147 (286)
Q Consensus 73 ~~~g~~l~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~-----~~~~~ 147 (286)
..+|.+++++.+.+ ...|+||++||++++...|..+...+.+ +|+|+++|+ ||||.|.... +...+
T Consensus 9 ~~~g~~l~~~~~g~--~~~~~ivllHG~~~~~~~w~~~~~~L~~--~~~Vi~~D~-----~G~G~S~~~~~~~~~~~~~~ 79 (582)
T PRK05855 9 SSDGVRLAVYEWGD--PDRPTVVLVHGYPDNHEVWDGVAPLLAD--RFRVVAYDV-----RGAGRSSAPKRTAAYTLARL 79 (582)
T ss_pred eeCCEEEEEEEcCC--CCCCeEEEEcCCCchHHHHHHHHHHhhc--ceEEEEecC-----CCCCCCCCCCcccccCHHHH
Confidence 56888888876642 3468999999999998889988888843 899999999 9999997532 34555
Q ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc
Q psy4394 148 YADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY 188 (286)
Q Consensus 148 ~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 188 (286)
.+|+..+++.+ +. ..+++|+||||||.+++.++...
T Consensus 80 a~dl~~~i~~l----~~-~~~~~lvGhS~Gg~~a~~~a~~~ 115 (582)
T PRK05855 80 ADDFAAVIDAV----SP-DRPVHLLAHDWGSIQGWEAVTRP 115 (582)
T ss_pred HHHHHHHHHHh----CC-CCcEEEEecChHHHHHHHHHhCc
Confidence 66766666654 22 23599999999999998887664
No 74
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.70 E-value=6.3e-16 Score=115.06 Aligned_cols=176 Identities=20% Similarity=0.250 Sum_probs=125.0
Q ss_pred ccEEEeccCCCEEEEEEEeecCCCCeEEEEecCCc---cccch-hhHHHHhhccccceeEEEeeccCcCCCCccCCCCCC
Q psy4394 67 EGFFTRTSRGNRLACMFMKCSPNARFTILFSHGNA---VDIGQ-MSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRP 142 (286)
Q Consensus 67 ~~~~~~~~~g~~l~~~~~~~~~~~~p~vv~~HG~~---~~~~~-~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~ 142 (286)
+++.+.-..| .+...+-+++....|+.|++|-.+ +++.. ....+...+.+.||.++.+|+ ||.|+|.+..
T Consensus 5 ~~v~i~Gp~G-~le~~~~~~~~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNf-----RgVG~S~G~f 78 (210)
T COG2945 5 PTVIINGPAG-RLEGRYEPAKTPAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNF-----RGVGRSQGEF 78 (210)
T ss_pred CcEEecCCcc-cceeccCCCCCCCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecc-----cccccccCcc
Confidence 3444433333 445555555556789999999743 33222 122333334466999999999 9999999885
Q ss_pred Ch-hhHHHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc-CccEEEEeCCCCcccccccccccccccccccc
Q psy4394 143 SE-KNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY-QVGAVILHSPLMSGMRVAFPRTKRTWFFDVFP 220 (286)
Q Consensus 143 ~~-~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-~i~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~ 220 (286)
+. .+-.+|..++++|++++.. +.....+.|+|+|+++++.+|.+. .....+..+|..+..
T Consensus 79 D~GiGE~~Da~aaldW~~~~hp-~s~~~~l~GfSFGa~Ia~~la~r~~e~~~~is~~p~~~~~----------------- 140 (210)
T COG2945 79 DNGIGELEDAAAALDWLQARHP-DSASCWLAGFSFGAYIAMQLAMRRPEILVFISILPPINAY----------------- 140 (210)
T ss_pred cCCcchHHHHHHHHHHHHhhCC-CchhhhhcccchHHHHHHHHHHhcccccceeeccCCCCch-----------------
Confidence 43 4557999999999999864 222347899999999999999998 888888888766510
Q ss_pred hhhhcccccccccCCccccCCCCCCCCCCEEEEecCCCCccChhHHHHHHHHCCCCCCceEecCCC
Q psy4394 221 RVIFANVKTPIMGLSTLENIDKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPRPVEPLWVEGLS 286 (286)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~ga~ 286 (286)
....+.-..+|.++|+|+.|++++.....++++..+ . +++.++|++
T Consensus 141 ------------------dfs~l~P~P~~~lvi~g~~Ddvv~l~~~l~~~~~~~-~-~~i~i~~a~ 186 (210)
T COG2945 141 ------------------DFSFLAPCPSPGLVIQGDADDVVDLVAVLKWQESIK-I-TVITIPGAD 186 (210)
T ss_pred ------------------hhhhccCCCCCceeEecChhhhhcHHHHHHhhcCCC-C-ceEEecCCC
Confidence 112334456899999999999999999988888732 2 577787764
No 75
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.69 E-value=5.9e-16 Score=139.74 Aligned_cols=126 Identities=17% Similarity=0.032 Sum_probs=99.3
Q ss_pred eccCCCEEEEEEEeec-CCCCeEEEEecCCccccc----hhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCCCh--
Q psy4394 72 RTSRGNRLACMFMKCS-PNARFTILFSHGNAVDIG----QMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSE-- 144 (286)
Q Consensus 72 ~~~~g~~l~~~~~~~~-~~~~p~vv~~HG~~~~~~----~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~~-- 144 (286)
++.||.+|.+.++.|. .++.|+||++||++.+.. ........++ +.||.|+++|+ ||+|.|.+....
T Consensus 2 ~~~DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~-~~Gy~vv~~D~-----RG~g~S~g~~~~~~ 75 (550)
T TIGR00976 2 PMRDGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFV-AQGYAVVIQDT-----RGRGASEGEFDLLG 75 (550)
T ss_pred cCCCCCEEEEEEEecCCCCCCCEEEEecCCCCchhhccccccccHHHHH-hCCcEEEEEec-----cccccCCCceEecC
Confidence 4679999999999885 347799999999987643 1122334444 45999999999 999999876322
Q ss_pred hhHHHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc--CccEEEEeCCCCcccc
Q psy4394 145 KNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY--QVGAVILHSPLMSGMR 204 (286)
Q Consensus 145 ~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~~~~~ 204 (286)
....+|+.++++|+.++... ..+|+++|+|+||.+++.+|..+ .++++|..++..+..+
T Consensus 76 ~~~~~D~~~~i~~l~~q~~~-~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d~~~ 136 (550)
T TIGR00976 76 SDEAADGYDLVDWIAKQPWC-DGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWDLYR 136 (550)
T ss_pred cccchHHHHHHHHHHhCCCC-CCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccchhH
Confidence 45568999999999887543 36999999999999999999886 8999999888776443
No 76
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.68 E-value=3.9e-16 Score=134.76 Aligned_cols=118 Identities=17% Similarity=0.142 Sum_probs=78.1
Q ss_pred CCCEEEEEEEee-cCCCCeEEEEecCCccccch-------------hhHHHH---hhccccceeEEEeeccCcCCCCc-c
Q psy4394 75 RGNRLACMFMKC-SPNARFTILFSHGNAVDIGQ-------------MSSFFT---GLGSRINCNIFSYDYSGYDYSGY-G 136 (286)
Q Consensus 75 ~g~~l~~~~~~~-~~~~~p~vv~~HG~~~~~~~-------------~~~~~~---~l~~~~g~~vi~~d~~~~~~~G~-G 136 (286)
+|.++.|..+.. ++...|.||++||++++... |..++. .+. ..+|+|+++|+ +|+ |
T Consensus 31 ~~~~~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~-~~~~~vi~~Dl-----~G~~~ 104 (379)
T PRK00175 31 PPVELAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPID-TDRYFVICSNV-----LGGCK 104 (379)
T ss_pred CCceEEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccC-ccceEEEeccC-----CCCCC
Confidence 455666666642 12336899999999988764 333332 222 23899999999 883 4
Q ss_pred CCCCCC----C---------hhhHHHHHHHHHHHHHHHhCCCCCc-EEEEEeecChHHHHHHHhhc--CccEEEEeCCCC
Q psy4394 137 ISTGRP----S---------EKNLYADIDAAWNTLRTRYGISPEN-IILYGQSIGTVPTIDLASRY--QVGAVILHSPLM 200 (286)
Q Consensus 137 ~s~~~~----~---------~~~~~~d~~~~~~~l~~~~~~~~~~-i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~ 200 (286)
.|.+.. . .....+|..+.+..+.++++++ + ++++||||||.+++.+|.++ +++++|++++..
T Consensus 105 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~--~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 182 (379)
T PRK00175 105 GSTGPSSINPDTGKPYGSDFPVITIRDWVRAQARLLDALGIT--RLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSA 182 (379)
T ss_pred CCCCCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCCC--CceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCc
Confidence 443211 0 0112345455555555555654 7 58999999999999999998 999999997654
No 77
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.68 E-value=9.1e-16 Score=152.42 Aligned_cols=187 Identities=13% Similarity=0.186 Sum_probs=116.7
Q ss_pred CCeEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCCC-------hhhHHHHHHHHHHHHHHHh
Q psy4394 90 ARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPS-------EKNLYADIDAAWNTLRTRY 162 (286)
Q Consensus 90 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~-------~~~~~~d~~~~~~~l~~~~ 162 (286)
..++|||+||++++...|..++..+.. +|+|+++|+ ||||.|..... .....+++.+.+..+.++.
T Consensus 1370 ~~~~vVllHG~~~s~~~w~~~~~~L~~--~~rVi~~Dl-----~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l 1442 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTGEDWIPIMKAISG--SARCISIDL-----PGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHI 1442 (1655)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHhC--CCEEEEEcC-----CCCCCCCCccccccccccccCCHHHHHHHHHHHHHHh
Confidence 457999999999999999998888864 699999999 99999864321 1111334444343334444
Q ss_pred CCCCCcEEEEEeecChHHHHHHHhhc--CccEEEEeCCCCccccccccc--------------------cccccccccc-
Q psy4394 163 GISPENIILYGQSIGTVPTIDLASRY--QVGAVILHSPLMSGMRVAFPR--------------------TKRTWFFDVF- 219 (286)
Q Consensus 163 ~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~~~~~~~~~~--------------------~~~~~~~~~~- 219 (286)
+. ++++|+||||||.+++.++.++ +++++|++++........... ....|....+
T Consensus 1443 ~~--~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~ 1520 (1655)
T PLN02980 1443 TP--GKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEVARKIRSAKDDSRARMLIDHGLEIFLENWYSGELW 1520 (1655)
T ss_pred CC--CCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchHHHHHHhhhhhHHHHHHHhhhHHHHHHHhccHHHh
Confidence 43 4999999999999999999988 899999987642211000000 0000100000
Q ss_pred c---------hhhhcccc-ccc-------ccC---CccccCCCCCCCCCCEEEEecCCCCccChhHHHHHHHHCCCC---
Q psy4394 220 P---------RVIFANVK-TPI-------MGL---STLENIDKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPRP--- 276 (286)
Q Consensus 220 ~---------~~~~~~~~-~~~-------~~~---~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~--- 276 (286)
. ........ ... ..+ ...+..+.++++++|+|+|+|++|..++ +.++++.+.+++.
T Consensus 1521 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a~~~ 1599 (1655)
T PLN02980 1521 KSLRNHPHFNKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDTPLLLVVGEKDVKFK-QIAQKMYREIGKSKES 1599 (1655)
T ss_pred hhhccCHHHHHHHHHHHhcCCHHHHHHHHHHhhhcccchHHHHHhhCCCCEEEEEECCCCccH-HHHHHHHHHccccccc
Confidence 0 00000000 000 000 0111224577889999999999999875 6777888777652
Q ss_pred --------CCceEecCCC
Q psy4394 277 --------VEPLWVEGLS 286 (286)
Q Consensus 277 --------~~~~~~~ga~ 286 (286)
.++++++++|
T Consensus 1600 ~~~~~~~~a~lvvI~~aG 1617 (1655)
T PLN02980 1600 GNDKGKEIIEIVEIPNCG 1617 (1655)
T ss_pred cccccccceEEEEECCCC
Confidence 3789999986
No 78
>KOG2281|consensus
Probab=99.68 E-value=5.3e-16 Score=134.03 Aligned_cols=208 Identities=17% Similarity=0.142 Sum_probs=142.8
Q ss_pred ccEEEeccCCCEEEEEEEeec----CCCCeEEEEecCCccccch-----hh--HHHHhhccccceeEEEeeccCcCCCCc
Q psy4394 67 EGFFTRTSRGNRLACMFMKCS----PNARFTILFSHGNAVDIGQ-----MS--SFFTGLGSRINCNIFSYDYSGYDYSGY 135 (286)
Q Consensus 67 ~~~~~~~~~g~~l~~~~~~~~----~~~~p~vv~~HG~~~~~~~-----~~--~~~~~l~~~~g~~vi~~d~~~~~~~G~ 135 (286)
|.+.+.+..|..+.+.+++|. +++.|+++++.|+++-..- +. -.+..|+ .+||.|+.+|-||+-+||-
T Consensus 614 eif~fqs~tg~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~La-slGy~Vv~IDnRGS~hRGl 692 (867)
T KOG2281|consen 614 EIFSFQSKTGLTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLA-SLGYVVVFIDNRGSAHRGL 692 (867)
T ss_pred hheeeecCCCcEEEEEEEccccCCCCCCCceEEEEcCCCceEEeeccccceehhhhhhhh-hcceEEEEEcCCCccccch
Confidence 557778888999999999983 3568999999999874311 11 2234455 5699999999965555543
Q ss_pred cCCCCCCCh--hhHHHHHHHHHHHHHHHhC-CCCCcEEEEEeecChHHHHHHHhhc--CccEEEEeCCCCcccccccccc
Q psy4394 136 GISTGRPSE--KNLYADIDAAWNTLRTRYG-ISPENIILYGQSIGTVPTIDLASRY--QVGAVILHSPLMSGMRVAFPRT 210 (286)
Q Consensus 136 G~s~~~~~~--~~~~~d~~~~~~~l~~~~~-~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~~~~~~~~~~~ 210 (286)
-..+.-... .--++|..+.++++.++++ +|.++|++.|+|+||++++....++ -++.+|+-+|+++ |+..-.
T Consensus 693 kFE~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT~-W~~YDT-- 769 (867)
T KOG2281|consen 693 KFESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVTD-WRLYDT-- 769 (867)
T ss_pred hhHHHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcceeeEEeccCccee-eeeecc--
Confidence 221111111 1124799999999999985 7889999999999999999999998 6678888888876 332222
Q ss_pred cccccccccchhhhcccccccccCCccccC---CCCCCCCCCEEEEecCCCCccChhHHHHHHHHCC---CCCCceEecC
Q psy4394 211 KRTWFFDVFPRVIFANVKTPIMGLSTLENI---DKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCP---RPVEPLWVEG 284 (286)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~---~~~~~~~~~g 284 (286)
.+...++.....+...+...+.. +.+..-...+|++||--|+.|++.+...+.+++. ++.++.+||+
T Consensus 770 -------gYTERYMg~P~~nE~gY~agSV~~~VeklpdepnRLlLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~IfP~ 842 (867)
T KOG2281|consen 770 -------GYTERYMGYPDNNEHGYGAGSVAGHVEKLPDEPNRLLLVHGLIDENVHFAHTSRLVSALVKAGKPYELQIFPN 842 (867)
T ss_pred -------cchhhhcCCCccchhcccchhHHHHHhhCCCCCceEEEEecccccchhhhhHHHHHHHHHhCCCceEEEEccc
Confidence 22222333222233333333333 3444445679999999999999999999988764 3478889887
Q ss_pred C
Q psy4394 285 L 285 (286)
Q Consensus 285 a 285 (286)
.
T Consensus 843 E 843 (867)
T KOG2281|consen 843 E 843 (867)
T ss_pred c
Confidence 4
No 79
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.67 E-value=2.7e-15 Score=132.53 Aligned_cols=201 Identities=13% Similarity=0.085 Sum_probs=127.1
Q ss_pred CEEEEEEEeecC--CCCeEEEEecCCccccchh-----hHHHHhhccccceeEEEeeccCcCCCCccCCCCCCChhhHH-
Q psy4394 77 NRLACMFMKCSP--NARFTILFSHGNAVDIGQM-----SSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSEKNLY- 148 (286)
Q Consensus 77 ~~l~~~~~~~~~--~~~p~vv~~HG~~~~~~~~-----~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~~~~~~- 148 (286)
..+..+.|.|.. ..++.||++||......-+ ..++..+.++ ||.|+++|+ +|+|.+.......+..
T Consensus 172 ~~~eLi~Y~P~t~~~~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~q-Gf~V~~iDw-----rgpg~s~~~~~~ddY~~ 245 (532)
T TIGR01838 172 ELFQLIQYEPTTETVHKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQ-GHTVFVISW-----RNPDASQADKTFDDYIR 245 (532)
T ss_pred CcEEEEEeCCCCCcCCCCcEEEECcccccceeeecccchHHHHHHHHC-CcEEEEEEC-----CCCCcccccCChhhhHH
Confidence 345555666642 2457799999987554333 3677777754 999999999 9999887655555555
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHH----HHhhc---CccEEEEeCCCCcccccc-----ccc-------
Q psy4394 149 ADIDAAWNTLRTRYGISPENIILYGQSIGTVPTID----LASRY---QVGAVILHSPLMSGMRVA-----FPR------- 209 (286)
Q Consensus 149 ~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~----~a~~~---~i~~~v~~~p~~~~~~~~-----~~~------- 209 (286)
+++.++++.+.+..+.+ +++++|||+||.++.. ++... ++++++++++..+..... ...
T Consensus 246 ~~i~~al~~v~~~~g~~--kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l~~f~~~~~~~~~e 323 (532)
T TIGR01838 246 DGVIAALEVVEAITGEK--QVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGELGVFVDEEIVAGIE 323 (532)
T ss_pred HHHHHHHHHHHHhcCCC--CeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchhhhhcCchhHHHHH
Confidence 56889999999877644 9999999999998522 33332 689999987765522100 000
Q ss_pred --------cc-------ccccc--cccch-hh----hcc-----------------------------ccccc---ccCC
Q psy4394 210 --------TK-------RTWFF--DVFPR-VI----FAN-----------------------------VKTPI---MGLS 235 (286)
Q Consensus 210 --------~~-------~~~~~--~~~~~-~~----~~~-----------------------------~~~~~---~~~~ 235 (286)
++ ..++. +.+.. .. ... ...+. ..+.
T Consensus 324 ~~~~~~G~lpg~~m~~~F~~lrp~~l~w~~~v~~yl~g~~~~~fdll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~~G~~~ 403 (532)
T TIGR01838 324 RQNGGGGYLDGRQMAVTFSLLRENDLIWNYYVDNYLKGKSPVPFDLLFWNSDSTNLPGKMHNFYLRNLYLQNALTTGGLE 403 (532)
T ss_pred HHHHhcCCCCHHHHHHHHHhcChhhHHHHHHHHHHhcCCCccchhHHHHhccCccchHHHHHHHHHHHHhcCCCcCCeeE
Confidence 00 00000 00000 00 000 00000 0011
Q ss_pred ccccCCCCCCCCCCEEEEecCCCCccChhHHHHHHHHCCCCCCceEecCCC
Q psy4394 236 TLENIDKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPRPVEPLWVEGLS 286 (286)
Q Consensus 236 ~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~ga~ 286 (286)
..+....++++++|+|+++|++|.++|++.++.+.+.+++. +.++++++|
T Consensus 404 v~g~~~dL~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i~~~-~~~vL~~sG 453 (532)
T TIGR01838 404 VCGVRLDLSKVKVPVYIIATREDHIAPWQSAYRGAALLGGP-KTFVLGESG 453 (532)
T ss_pred ECCEecchhhCCCCEEEEeeCCCCcCCHHHHHHHHHHCCCC-EEEEECCCC
Confidence 11223567789999999999999999999999999998865 667787765
No 80
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.67 E-value=2.7e-15 Score=119.61 Aligned_cols=171 Identities=21% Similarity=0.225 Sum_probs=94.8
Q ss_pred EEeecCCCCeEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCC-CccC---CC-----CCC----ChhhHH-
Q psy4394 83 FMKCSPNARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYS-GYGI---ST-----GRP----SEKNLY- 148 (286)
Q Consensus 83 ~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~-G~G~---s~-----~~~----~~~~~~- 148 (286)
+..|.++.+++||++||.|.+...+..............++.++-...... ..|. +- ... ...+..
T Consensus 6 i~~~~~~~~~lvi~LHG~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~ 85 (216)
T PF02230_consen 6 IIEPKGKAKPLVILLHGYGDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEE 85 (216)
T ss_dssp EE--SST-SEEEEEE--TTS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHH
T ss_pred EeCCCCCCceEEEEECCCCCCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHH
Confidence 344566788999999999988855554444222233667776643110000 0111 10 001 112222
Q ss_pred --HHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc--CccEEEEeCCCCcccccccccccccccccccchhhh
Q psy4394 149 --ADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY--QVGAVILHSPLMSGMRVAFPRTKRTWFFDVFPRVIF 224 (286)
Q Consensus 149 --~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (286)
+.+.++++...+ .++++++|++.|+|+||.+|+.++.++ .+.++|+++++...... ..
T Consensus 86 s~~~l~~li~~~~~-~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~-------------~~---- 147 (216)
T PF02230_consen 86 SAERLDELIDEEVA-YGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESE-------------LE---- 147 (216)
T ss_dssp HHHHHHHHHHHHHH-TT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCC-------------CH----
T ss_pred HHHHHHHHHHHHHH-cCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeecccccccc-------------cc----
Confidence 233344443333 368889999999999999999999988 99999999986641100 00
Q ss_pred cccccccccCCccccCCCCCCCCCCEEEEecCCCCccChhHHHHHHHHCCCC---CCceEecCCC
Q psy4394 225 ANVKTPIMGLSTLENIDKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPRP---VEPLWVEGLS 286 (286)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~---~~~~~~~ga~ 286 (286)
+...... ++|++++||++|+++|.+.+++..+.+.+. .++..++|.|
T Consensus 148 -------------~~~~~~~--~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~g 197 (216)
T PF02230_consen 148 -------------DRPEALA--KTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGG 197 (216)
T ss_dssp -------------CCHCCCC--TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-S
T ss_pred -------------ccccccC--CCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCC
Confidence 0011111 689999999999999999888888877554 5677888654
No 81
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.66 E-value=2.8e-16 Score=124.96 Aligned_cols=180 Identities=22% Similarity=0.280 Sum_probs=113.0
Q ss_pred EEEecCCcccc---chhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCCChhhHHHHHHHHHHHHHHH---hCCCCC
Q psy4394 94 ILFSHGNAVDI---GQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSEKNLYADIDAAWNTLRTR---YGISPE 167 (286)
Q Consensus 94 vv~~HG~~~~~---~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~~~~~~~d~~~~~~~l~~~---~~~~~~ 167 (286)
||++||++... .....+...++.+.|+.|+.+|| |- .++...+...+|+.++++|+.++ ++++.+
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Y-----rl----~p~~~~p~~~~D~~~a~~~l~~~~~~~~~d~~ 71 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDY-----RL----APEAPFPAALEDVKAAYRWLLKNADKLGIDPE 71 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE------------TTTSSTTHHHHHHHHHHHHHHHTHHHHTEEEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeec-----cc----cccccccccccccccceeeecccccccccccc
Confidence 79999988643 34456677777657999999999 63 34456778899999999999998 577889
Q ss_pred cEEEEEeecChHHHHHHHhhc------CccEEEEeCCCCccccccccccc--ccccc-cccch----hhhcccc-ccccc
Q psy4394 168 NIILYGQSIGTVPTIDLASRY------QVGAVILHSPLMSGMRVAFPRTK--RTWFF-DVFPR----VIFANVK-TPIMG 233 (286)
Q Consensus 168 ~i~l~G~S~Gg~~a~~~a~~~------~i~~~v~~~p~~~~~~~~~~~~~--~~~~~-~~~~~----~~~~~~~-~~~~~ 233 (286)
+|+|+|+|.||.+|+.++... .++++++++|..+.......... ..... ..+.. ....... .....
T Consensus 72 ~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (211)
T PF07859_consen 72 RIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDLQDFDGPSYDDSNENKDDPFLPAPKIDWFWKLYLPGSDRD 151 (211)
T ss_dssp EEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSSTSTSSCHHHHHHHHHSTTSSSBHHHHHHHHHHHHSTGGTT
T ss_pred ceEEeecccccchhhhhhhhhhhhcccchhhhhcccccccchhccccccccccccccccccccccccccccccccccccc
Confidence 999999999999999998754 48999999998764111101100 00000 01110 0000000 11111
Q ss_pred CCccccCCC--CCCCCCCEEEEecCCCCccChhHHHHHHHHCCCC---CCceEecCC
Q psy4394 234 LSTLENIDK--VPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPRP---VEPLWVEGL 285 (286)
Q Consensus 234 ~~~~~~~~~--~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~---~~~~~~~ga 285 (286)
....++... .+. -.|+++++|+.|.++ +++..+.+++++. ++++.++|+
T Consensus 152 ~~~~sp~~~~~~~~-~Pp~~i~~g~~D~l~--~~~~~~~~~L~~~gv~v~~~~~~g~ 205 (211)
T PF07859_consen 152 DPLASPLNASDLKG-LPPTLIIHGEDDVLV--DDSLRFAEKLKKAGVDVELHVYPGM 205 (211)
T ss_dssp STTTSGGGSSCCTT-CHEEEEEEETTSTTH--HHHHHHHHHHHHTT-EEEEEEETTE
T ss_pred cccccccccccccc-CCCeeeeccccccch--HHHHHHHHHHHHCCCCEEEEEECCC
Confidence 112223322 222 359999999999876 4677888777543 677788774
No 82
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.64 E-value=5.6e-16 Score=128.46 Aligned_cols=206 Identities=16% Similarity=0.150 Sum_probs=109.9
Q ss_pred CccccEEEeccCCCEEEEEEEeecC--CCCeEEEEecCCccccch--------------h----hHHHHhhccccceeEE
Q psy4394 64 SNIEGFFTRTSRGNRLACMFMKCSP--NARFTILFSHGNAVDIGQ--------------M----SSFFTGLGSRINCNIF 123 (286)
Q Consensus 64 ~~~~~~~~~~~~g~~l~~~~~~~~~--~~~p~vv~~HG~~~~~~~--------------~----~~~~~~l~~~~g~~vi 123 (286)
...|.+.+.+..+..+.++++.|++ ++.|.||++||-++.... + ......++ +.||.|+
T Consensus 86 Y~~EKv~f~~~p~~~vpaylLvPd~~~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LA-k~GYVvl 164 (390)
T PF12715_consen 86 YTREKVEFNTTPGSRVPAYLLVPDGAKGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLA-KRGYVVL 164 (390)
T ss_dssp EEEEEEEE--STTB-EEEEEEEETT--S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHH-TTTSEEE
T ss_pred eEEEEEEEEccCCeeEEEEEEecCCCCCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHH-hCCCEEE
Confidence 4567888888899999999998865 577999999997654321 1 12345566 4599999
Q ss_pred EeeccCcCCCCccCCCCCC--------Ch--------------hhH-HHHHHHHHHHHHHHhCCCCCcEEEEEeecChHH
Q psy4394 124 SYDYSGYDYSGYGISTGRP--------SE--------------KNL-YADIDAAWNTLRTRYGISPENIILYGQSIGTVP 180 (286)
Q Consensus 124 ~~d~~~~~~~G~G~s~~~~--------~~--------------~~~-~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~ 180 (286)
++|. +|+|...... .. .++ ..|...+++|+.....+|+++|+++|+||||+.
T Consensus 165 a~D~-----~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~ 239 (390)
T PF12715_consen 165 APDA-----LGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYR 239 (390)
T ss_dssp EE-------TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHH
T ss_pred EEcc-----ccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHH
Confidence 9999 8887654321 00 011 146677999999999999999999999999999
Q ss_pred HHHHHhhc-CccEEEEeCCCCccccc--cc--ccccc-cccccccchhhhcccccccccCCccccCCCCCCCCCCEEEEe
Q psy4394 181 TIDLASRY-QVGAVILHSPLMSGMRV--AF--PRTKR-TWFFDVFPRVIFANVKTPIMGLSTLENIDKVPKVTSPVLVIH 254 (286)
Q Consensus 181 a~~~a~~~-~i~~~v~~~p~~~~~~~--~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~ 254 (286)
++.+++.. +|++.|..+-+....+. .+ +.... ..+...+... .-.+..+.++..+..+- -..|+|++.
T Consensus 240 a~~LaALDdRIka~v~~~~l~~~~~~~~~mt~~~~~~~~~~~~~~~~~-----iPgl~r~~D~PdIasli-APRPll~~n 313 (390)
T PF12715_consen 240 AWWLAALDDRIKATVANGYLCTTQERALLMTMPNNNGLRGFPNCICNY-----IPGLWRYFDFPDIASLI-APRPLLFEN 313 (390)
T ss_dssp HHHHHHH-TT--EEEEES-B--HHHHHHHB----TTS----SS-GGG-------TTCCCC--HHHHHHTT-TTS-EEESS
T ss_pred HHHHHHcchhhHhHhhhhhhhccchhhHhhccccccccCcCcchhhhh-----CccHHhhCccHHHHHHh-CCCcchhhc
Confidence 99999988 99988876543221110 00 00000 0000000000 00000011111111111 147999999
Q ss_pred cCCCCccChhHHHHHHHHCCCC--CCceEec
Q psy4394 255 GTEDEVIDLSHGIAIYERCPRP--VEPLWVE 283 (286)
Q Consensus 255 G~~D~~v~~~~~~~l~~~~~~~--~~~~~~~ 283 (286)
|..|..+|. .++.|+..+.+ .+++.+|
T Consensus 314 G~~Dklf~i--V~~AY~~~~~p~n~~~~~~p 342 (390)
T PF12715_consen 314 GGKDKLFPI--VRRAYAIMGAPDNFQIHHYP 342 (390)
T ss_dssp -B-HHHHHH--HHHHHHHTT-GGGEEE---G
T ss_pred CCcccccHH--HHHHHHhcCCCcceEEeecc
Confidence 999999765 77888877655 4444444
No 83
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.64 E-value=1.7e-15 Score=124.99 Aligned_cols=201 Identities=17% Similarity=0.135 Sum_probs=126.6
Q ss_pred CCCEEEEEEEee---cCCCCeEEEEecCCccccchhhHHH---H-------hhccccceeEEEeeccCcCCCCccCCCCC
Q psy4394 75 RGNRLACMFMKC---SPNARFTILFSHGNAVDIGQMSSFF---T-------GLGSRINCNIFSYDYSGYDYSGYGISTGR 141 (286)
Q Consensus 75 ~g~~l~~~~~~~---~~~~~p~vv~~HG~~~~~~~~~~~~---~-------~l~~~~g~~vi~~d~~~~~~~G~G~s~~~ 141 (286)
||.+|.+.++.| .+++.|+||..|+++.+........ . .++ +.||.|+..|. ||.|.|++.
T Consensus 1 DGv~L~adv~~P~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~-~~GY~vV~~D~-----RG~g~S~G~ 74 (272)
T PF02129_consen 1 DGVRLAADVYRPGADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFA-ERGYAVVVQDV-----RGTGGSEGE 74 (272)
T ss_dssp TS-EEEEEEEEE--TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHH-HTT-EEEEEE------TTSTTS-S-
T ss_pred CCCEEEEEEEecCCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHH-hCCCEEEEECC-----cccccCCCc
Confidence 789999999988 4567899999999886431111111 1 144 55999999999 999999987
Q ss_pred CC--hhhHHHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc--CccEEEEeCCCCcccc-cccccc------
Q psy4394 142 PS--EKNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY--QVGAVILHSPLMSGMR-VAFPRT------ 210 (286)
Q Consensus 142 ~~--~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~~~~~-~~~~~~------ 210 (286)
.. .....+|..++++|+.++ .....+|.++|.|++|..++.+|... .+++++..++..+..+ ...+.-
T Consensus 75 ~~~~~~~e~~D~~d~I~W~~~Q-pws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~~~~~~~~gG~~~~~~ 153 (272)
T PF02129_consen 75 FDPMSPNEAQDGYDTIEWIAAQ-PWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDLYRDSIYPGGAFRLGF 153 (272)
T ss_dssp B-TTSHHHHHHHHHHHHHHHHC-TTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBTCCTSSEETTEEBCCH
T ss_pred cccCChhHHHHHHHHHHHHHhC-CCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcccccchhcCCcccccc
Confidence 54 344568999999999998 44557999999999999999999865 9999999988887654 221110
Q ss_pred ccccc----------cc--c----cc---------hhhhcccccc-------------cccCCccccCCCCCCCCCCEEE
Q psy4394 211 KRTWF----------FD--V----FP---------RVIFANVKTP-------------IMGLSTLENIDKVPKVTSPVLV 252 (286)
Q Consensus 211 ~~~~~----------~~--~----~~---------~~~~~~~~~~-------------~~~~~~~~~~~~~~~i~~Pvli 252 (286)
...|. .. . .. .......... .......+..+.+.++++|+|+
T Consensus 154 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~i~vP~l~ 233 (272)
T PF02129_consen 154 FAGWEDLQSQQEDPQSRPAPDRDYLRERARYEALGDSPLGRLPRDPPYWDEWLDHPPYDPFWQERSPSERLDKIDVPVLI 233 (272)
T ss_dssp HHHHHHHHHHHHHHTCCCCSSSHHHHHHHHHHCHHHHHHHHCHGGTHHHHHHHHT-SSSHHHHTTBHHHHHGG--SEEEE
T ss_pred hhHHHHHHHHhhcccCCCchhhhhhhhhhhhhhhhhHHHhhhccccHHHHHHHhCCCcCHHHHhCChHHHHhhCCCCEEE
Confidence 00110 00 0 00 0000000000 0001111222345788999999
Q ss_pred EecCCCCccChhHHHHHHHHCCCCC----CceEec
Q psy4394 253 IHGTEDEVIDLSHGIAIYERCPRPV----EPLWVE 283 (286)
Q Consensus 253 i~G~~D~~v~~~~~~~l~~~~~~~~----~~~~~~ 283 (286)
+.|-.|.... ..+.+.++++.... ++++-|
T Consensus 234 v~Gw~D~~~~-~~~~~~~~~l~~~~~~~~~Liigp 267 (272)
T PF02129_consen 234 VGGWYDTLFL-RGALRAYEALRAPGSKPQRLIIGP 267 (272)
T ss_dssp EEETTCSSTS-HHHHHHHHHHCTTSTC-EEEEEES
T ss_pred ecccCCcccc-hHHHHHHHHhhcCCCCCCEEEEeC
Confidence 9999997777 78888888887764 555544
No 84
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.63 E-value=2.6e-14 Score=120.43 Aligned_cols=199 Identities=20% Similarity=0.186 Sum_probs=128.4
Q ss_pred ccCCCEEEEEEEee--c-CCCCeEEEEecCCcccc---chhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCCChhh
Q psy4394 73 TSRGNRLACMFMKC--S-PNARFTILFSHGNAVDI---GQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSEKN 146 (286)
Q Consensus 73 ~~~g~~l~~~~~~~--~-~~~~p~vv~~HG~~~~~---~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~~~~ 146 (286)
...+..+.+..+.| . ..+.|+||++||++... .........++...|+.|+.+|| | ..++..++.
T Consensus 58 ~~~~~~~~~~~y~p~~~~~~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdY-----r----laPe~~~p~ 128 (312)
T COG0657 58 GPSGDGVPVRVYRPDRKAAATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDY-----R----LAPEHPFPA 128 (312)
T ss_pred CCCCCceeEEEECCCCCCCCCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCC-----C----CCCCCCCCc
Confidence 33455567777776 2 22479999999998644 33445666777777999999999 5 333446677
Q ss_pred HHHHHHHHHHHHHHH---hCCCCCcEEEEEeecChHHHHHHHhhc------CccEEEEeCCCCccccccccccccccccc
Q psy4394 147 LYADIDAAWNTLRTR---YGISPENIILYGQSIGTVPTIDLASRY------QVGAVILHSPLMSGMRVAFPRTKRTWFFD 217 (286)
Q Consensus 147 ~~~d~~~~~~~l~~~---~~~~~~~i~l~G~S~Gg~~a~~~a~~~------~i~~~v~~~p~~~~~~~~~~~~~~~~~~~ 217 (286)
..+|+.++++|+.++ +++|+++|+++|+|.||.+++.++... ...+.++++|..+... ............
T Consensus 129 ~~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~-~~~~~~~~~~~~ 207 (312)
T COG0657 129 ALEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTS-SAASLPGYGEAD 207 (312)
T ss_pred hHHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcc-cccchhhcCCcc
Confidence 789999999999977 578999999999999999999988754 4689999999988543 111111111001
Q ss_pred ccch-----hhhccccccccc-C-CccccCCC--CCCCCCCEEEEecCCCCccChhHHHHHHHHCCCC---CCceEecC
Q psy4394 218 VFPR-----VIFANVKTPIMG-L-STLENIDK--VPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPRP---VEPLWVEG 284 (286)
Q Consensus 218 ~~~~-----~~~~~~~~~~~~-~-~~~~~~~~--~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~---~~~~~~~g 284 (286)
.+.. .+.......... . ...+++.. +.. -.|+++++|+.|.+.+ +++.+.+++... .++..++|
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~p~~spl~~~~~~~-lPP~~i~~a~~D~l~~--~~~~~a~~L~~agv~~~~~~~~g 283 (312)
T COG0657 208 LLDAAAILAWFADLYLGAAPDREDPEASPLASDDLSG-LPPTLIQTAEFDPLRD--EGEAYAERLRAAGVPVELRVYPG 283 (312)
T ss_pred ccCHHHHHHHHHHHhCcCccccCCCccCccccccccC-CCCEEEEecCCCcchh--HHHHHHHHHHHcCCeEEEEEeCC
Confidence 1110 111111110000 0 11222211 333 5789999999999988 677777766443 45666665
No 85
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.62 E-value=1e-14 Score=112.57 Aligned_cols=208 Identities=15% Similarity=0.150 Sum_probs=120.3
Q ss_pred EEeccCCCEEEEEEEeecC---CCCeEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCc-cCCCCCCC--
Q psy4394 70 FTRTSRGNRLACMFMKCSP---NARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGY-GISTGRPS-- 143 (286)
Q Consensus 70 ~~~~~~g~~l~~~~~~~~~---~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~-G~s~~~~~-- 143 (286)
.+...+|..|+.|..+|.. ...++||+..|++..+..+...+..++ .+|++|+.+|. -.| |.|++...
T Consensus 6 vi~~~~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmdh~agLA~YL~-~NGFhViRyDs-----l~HvGlSsG~I~ef 79 (294)
T PF02273_consen 6 VIRLEDGRQIRVWETRPKNNEPKRNNTILIAPGFARRMDHFAGLAEYLS-ANGFHVIRYDS-----LNHVGLSSGDINEF 79 (294)
T ss_dssp EEEETTTEEEEEEEE---TTS---S-EEEEE-TT-GGGGGGHHHHHHHH-TTT--EEEE--------B------------
T ss_pred eeEcCCCCEEEEeccCCCCCCcccCCeEEEecchhHHHHHHHHHHHHHh-hCCeEEEeccc-----cccccCCCCChhhc
Confidence 4557789999999999843 356999999999999999999999888 55999999999 766 88887643
Q ss_pred -hhhHHHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhcCccEEEEeCCCCcccccccccccccccccccchh
Q psy4394 144 -EKNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRYQVGAVILHSPLMSGMRVAFPRTKRTWFFDVFPRV 222 (286)
Q Consensus 144 -~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~i~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 222 (286)
.....+|+..+++|+.+. |+ .++.|+..|+.|-+|+..|.+..+.-+|...++.++...........++.......
T Consensus 80 tms~g~~sL~~V~dwl~~~-g~--~~~GLIAaSLSaRIAy~Va~~i~lsfLitaVGVVnlr~TLe~al~~Dyl~~~i~~l 156 (294)
T PF02273_consen 80 TMSIGKASLLTVIDWLATR-GI--RRIGLIAASLSARIAYEVAADINLSFLITAVGVVNLRDTLEKALGYDYLQLPIEQL 156 (294)
T ss_dssp -HHHHHHHHHHHHHHHHHT-T-----EEEEEETTHHHHHHHHTTTS--SEEEEES--S-HHHHHHHHHSS-GGGS-GGG-
T ss_pred chHHhHHHHHHHHHHHHhc-CC--CcchhhhhhhhHHHHHHHhhccCcceEEEEeeeeeHHHHHHHHhccchhhcchhhC
Confidence 344468999999999955 54 48999999999999999999778888888888887543332222222211111100
Q ss_pred hhcc------------ccccc-ccCC-ccccCCCCCCCCCCEEEEecCCCCccChhHHHHHHHHCCCC-CCceEecCCC
Q psy4394 223 IFAN------------VKTPI-MGLS-TLENIDKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPRP-VEPLWVEGLS 286 (286)
Q Consensus 223 ~~~~------------~~~~~-~~~~-~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~-~~~~~~~ga~ 286 (286)
.... ..... ..+. ..+....++.+++|++.+++.+|.+|...+..++.+.+... .+++.++|+.
T Consensus 157 p~dldfeGh~l~~~vFv~dc~e~~w~~l~ST~~~~k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~~s~~~klysl~Gs~ 235 (294)
T PF02273_consen 157 PEDLDFEGHNLGAEVFVTDCFEHGWDDLDSTINDMKRLSIPFIAFTANDDDWVKQSEVEELLDNINSNKCKLYSLPGSS 235 (294)
T ss_dssp -SEEEETTEEEEHHHHHHHHHHTT-SSHHHHHHHHTT--S-EEEEEETT-TTS-HHHHHHHHTT-TT--EEEEEETT-S
T ss_pred CCcccccccccchHHHHHHHHHcCCccchhHHHHHhhCCCCEEEEEeCCCccccHHHHHHHHHhcCCCceeEEEecCcc
Confidence 0000 00000 0011 11234567788999999999999999999999999988776 5778888763
No 86
>KOG2564|consensus
Probab=99.61 E-value=6.2e-15 Score=115.89 Aligned_cols=112 Identities=21% Similarity=0.312 Sum_probs=88.9
Q ss_pred EEEEEEEeecCCCCeEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCCC----CChhhHHHHHHH
Q psy4394 78 RLACMFMKCSPNARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGR----PSEKNLYADIDA 153 (286)
Q Consensus 78 ~l~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~----~~~~~~~~d~~~ 153 (286)
++..++..|.....|++++.||++.+...|..+...+......+++++|+ ||||.+.-+ .+.+.+..|+.+
T Consensus 61 t~n~Y~t~~~~t~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~Dl-----RgHGeTk~~~e~dlS~eT~~KD~~~ 135 (343)
T KOG2564|consen 61 TFNVYLTLPSATEGPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDL-----RGHGETKVENEDDLSLETMSKDFGA 135 (343)
T ss_pred eEEEEEecCCCCCccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeec-----cccCccccCChhhcCHHHHHHHHHH
Confidence 56666665555678999999999999999999999998888899999999 999988644 344566677777
Q ss_pred HHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc---CccEEEEeC
Q psy4394 154 AWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY---QVGAVILHS 197 (286)
Q Consensus 154 ~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~---~i~~~v~~~ 197 (286)
+++++-.. .+.+|+|+||||||.+|...|... .+.|++.+.
T Consensus 136 ~i~~~fge---~~~~iilVGHSmGGaIav~~a~~k~lpsl~Gl~viD 179 (343)
T KOG2564|consen 136 VIKELFGE---LPPQIILVGHSMGGAIAVHTAASKTLPSLAGLVVID 179 (343)
T ss_pred HHHHHhcc---CCCceEEEeccccchhhhhhhhhhhchhhhceEEEE
Confidence 76666433 566899999999999999888766 667777653
No 87
>COG0400 Predicted esterase [General function prediction only]
Probab=99.61 E-value=1.3e-14 Score=112.80 Aligned_cols=160 Identities=25% Similarity=0.270 Sum_probs=109.0
Q ss_pred ecCCCCeEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCcc-----C-CCCCCChhhHH---HHHHHHHH
Q psy4394 86 CSPNARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYG-----I-STGRPSEKNLY---ADIDAAWN 156 (286)
Q Consensus 86 ~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G-----~-s~~~~~~~~~~---~d~~~~~~ 156 (286)
+.....|+||++||.|++...+.+....+.. .+.++.+ ||.-....| + ..+..+.++.. +...+.++
T Consensus 13 ~~~p~~~~iilLHG~Ggde~~~~~~~~~~~P--~~~~is~--rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~ 88 (207)
T COG0400 13 PGDPAAPLLILLHGLGGDELDLVPLPELILP--NATLVSP--RGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLE 88 (207)
T ss_pred CCCCCCcEEEEEecCCCChhhhhhhhhhcCC--CCeEEcC--CCCccccCcccceeecCCCccchhhHHHHHHHHHHHHH
Confidence 3445678999999999988888776666554 4566655 222100000 0 01112233333 44556666
Q ss_pred HHHHHhCCCCCcEEEEEeecChHHHHHHHhhc--CccEEEEeCCCCcccccccccccccccccccchhhhcccccccccC
Q psy4394 157 TLRTRYGISPENIILYGQSIGTVPTIDLASRY--QVGAVILHSPLMSGMRVAFPRTKRTWFFDVFPRVIFANVKTPIMGL 234 (286)
Q Consensus 157 ~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (286)
.+.++++++.++++++|+|.||.+++.+..++ .++++|+.+|..-..
T Consensus 89 ~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~------------------------------- 137 (207)
T COG0400 89 ELAEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLE------------------------------- 137 (207)
T ss_pred HHHHHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCC-------------------------------
Confidence 66777899999999999999999999999888 799999999876410
Q ss_pred CccccCCCCCCCCCCEEEEecCCCCccChhHHHHHHHHCCCC---CCceEecC
Q psy4394 235 STLENIDKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPRP---VEPLWVEG 284 (286)
Q Consensus 235 ~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~---~~~~~~~g 284 (286)
....-....+|++++||+.|++||...+.++.+.+.+. ++..++++
T Consensus 138 ----~~~~~~~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~~ 186 (207)
T COG0400 138 ----PELLPDLAGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHEG 186 (207)
T ss_pred ----CccccccCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEecC
Confidence 11111223589999999999999999998888776543 56666663
No 88
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.59 E-value=4.6e-14 Score=112.03 Aligned_cols=186 Identities=20% Similarity=0.266 Sum_probs=129.5
Q ss_pred cCCCCeEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCCChhhHHHHHHHHHHHHHHHhCCCC
Q psy4394 87 SPNARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSEKNLYADIDAAWNTLRTRYGISP 166 (286)
Q Consensus 87 ~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~~~~~~~d~~~~~~~l~~~~~~~~ 166 (286)
.+.+..+||-+||.+++-.++......|. +.|++++.++| ||+|.+.+.+.......+-...++.+.++.+++
T Consensus 31 ~gs~~gTVv~~hGsPGSH~DFkYi~~~l~-~~~iR~I~iN~-----PGf~~t~~~~~~~~~n~er~~~~~~ll~~l~i~- 103 (297)
T PF06342_consen 31 SGSPLGTVVAFHGSPGSHNDFKYIRPPLD-EAGIRFIGINY-----PGFGFTPGYPDQQYTNEERQNFVNALLDELGIK- 103 (297)
T ss_pred CCCCceeEEEecCCCCCccchhhhhhHHH-HcCeEEEEeCC-----CCCCCCCCCcccccChHHHHHHHHHHHHHcCCC-
Confidence 44456799999999998888887777776 55999999999 999999988777666677788888888888886
Q ss_pred CcEEEEEeecChHHHHHHHhhcCccEEEEeCCCCccc-ccccc---cccccccccccchhhhcc------------ccc-
Q psy4394 167 ENIILYGQSIGTVPTIDLASRYQVGAVILHSPLMSGM-RVAFP---RTKRTWFFDVFPRVIFAN------------VKT- 229 (286)
Q Consensus 167 ~~i~l~G~S~Gg~~a~~~a~~~~i~~~v~~~p~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~------------~~~- 229 (286)
++++.+|||.|+-.|+.++..+...++++++|.--.. +...+ .....|+...++...... ...
T Consensus 104 ~~~i~~gHSrGcenal~la~~~~~~g~~lin~~G~r~HkgIrp~~r~~~i~~l~~~lp~~~~~~i~~~~y~~iG~KV~~G 183 (297)
T PF06342_consen 104 GKLIFLGHSRGCENALQLAVTHPLHGLVLINPPGLRPHKGIRPLSRMETINYLYDLLPRFIINAIMYFYYRMIGFKVSDG 183 (297)
T ss_pred CceEEEEeccchHHHHHHHhcCccceEEEecCCccccccCcCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhCeeecCh
Confidence 6999999999999999999999888999998753111 11111 000111111111111000 000
Q ss_pred -----------ccccCCccccCCCCCCCCCCEEEEecCCCCccChhHHHHHHHHCCCCCCc
Q psy4394 230 -----------PIMGLSTLENIDKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPRPVEP 279 (286)
Q Consensus 230 -----------~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~ 279 (286)
....-.....++.+.+-++|+|+..|.+|.+|.-+.+.++.+....-.++
T Consensus 184 eeA~na~r~m~~~df~~q~~~I~~ln~~~ikvli~ygg~DhLIEeeI~~E~a~~f~~l~Hf 244 (297)
T PF06342_consen 184 EEAINAMRSMQNCDFEEQKEYIDKLNKKPIKVLIAYGGKDHLIEEEISFEFAMKFKGLDHF 244 (297)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHhccCCCcEEEEEcCcchhhHHHHHHHHHHHhCCccce
Confidence 00111122334566667799999999999999999999998887654333
No 89
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.59 E-value=3.9e-14 Score=111.41 Aligned_cols=185 Identities=16% Similarity=0.158 Sum_probs=110.2
Q ss_pred EEEEEeecC---CCCeEEEEecCCccccchhhH--HHHhhccccceeEEEeeccCc-CCCCc-cCCC-CCCChhhHHHHH
Q psy4394 80 ACMFMKCSP---NARFTILFSHGNAVDIGQMSS--FFTGLGSRINCNIFSYDYSGY-DYSGY-GIST-GRPSEKNLYADI 151 (286)
Q Consensus 80 ~~~~~~~~~---~~~p~vv~~HG~~~~~~~~~~--~~~~l~~~~g~~vi~~d~~~~-~~~G~-G~s~-~~~~~~~~~~d~ 151 (286)
.|.+|-|.. .+.|+||++||.+.+...+.. -+..++++.|+.|+.++-... +..++ .... ....-.+....+
T Consensus 2 ~Y~lYvP~~~~~~~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i 81 (220)
T PF10503_consen 2 SYRLYVPPGAPRGPVPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFI 81 (220)
T ss_pred cEEEecCCCCCCCCCCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhH
Confidence 456665532 256999999999987765543 356688888999999986110 00000 0000 001111224567
Q ss_pred HHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc--CccEEEEeCCCCcccccccccccccccccccchhhhccccc
Q psy4394 152 DAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY--QVGAVILHSPLMSGMRVAFPRTKRTWFFDVFPRVIFANVKT 229 (286)
Q Consensus 152 ~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (286)
..+++++..++++|++||++.|+|.||+++..++..+ .|.++...++..-.-.. .... .+ ..+. ......
T Consensus 82 ~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~~~a~--~~~~--a~-~~m~---~g~~~~ 153 (220)
T PF10503_consen 82 AALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPYGCAA--SGAS--AL-SAMR---SGPRPA 153 (220)
T ss_pred HHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeeccccccccc--Cccc--HH-HHhh---CCCCCC
Confidence 7889999999999999999999999999999999988 77887777664321100 0000 00 0000 000000
Q ss_pred ccccCCccccCCCCCCCCCCEEEEecCCCCccChhHHHHHHHHCC
Q psy4394 230 PIMGLSTLENIDKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCP 274 (286)
Q Consensus 230 ~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~ 274 (286)
+............. -..|++++||+.|.+|.+..+.++.+.+.
T Consensus 154 p~~~~~a~~~~g~~--~~~P~~v~hG~~D~tV~~~n~~~~~~q~~ 196 (220)
T PF10503_consen 154 PAAAWGARSDAGAY--PGYPRIVFHGTADTTVNPQNADQLVAQWL 196 (220)
T ss_pred hHHHHHhhhhccCC--CCCCEEEEecCCCCccCcchHHHHHHHHH
Confidence 00000000000011 13599999999999999998888877653
No 90
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.58 E-value=5.7e-16 Score=124.33 Aligned_cols=159 Identities=21% Similarity=0.349 Sum_probs=106.9
Q ss_pred eeEEEeeccCcCCCCccCCCC---CCChhhHHHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc--CccEEE
Q psy4394 120 CNIFSYDYSGYDYSGYGISTG---RPSEKNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY--QVGAVI 194 (286)
Q Consensus 120 ~~vi~~d~~~~~~~G~G~s~~---~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v 194 (286)
|+|+++|. ||+|.|++ ........+|+.+.++.+.+..+++ +++++||||||.+++.+|.++ +++++|
T Consensus 1 f~vi~~d~-----rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~vG~S~Gg~~~~~~a~~~p~~v~~lv 73 (230)
T PF00561_consen 1 FDVILFDL-----RGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIK--KINLVGHSMGGMLALEYAAQYPERVKKLV 73 (230)
T ss_dssp EEEEEEEC-----TTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTS--SEEEEEETHHHHHHHHHHHHSGGGEEEEE
T ss_pred CEEEEEeC-----CCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCC--CeEEEEECCChHHHHHHHHHCchhhcCcE
Confidence 68999999 99999996 3344444689999999999999876 699999999999999999999 899999
Q ss_pred EeCCCC--c--cccccccc-cc--------cccccccc-----------------------chhhhccccc--------c
Q psy4394 195 LHSPLM--S--GMRVAFPR-TK--------RTWFFDVF-----------------------PRVIFANVKT--------P 230 (286)
Q Consensus 195 ~~~p~~--~--~~~~~~~~-~~--------~~~~~~~~-----------------------~~~~~~~~~~--------~ 230 (286)
++++.. . ........ .. ..+..... .......... .
T Consensus 74 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (230)
T PF00561_consen 74 LISPPPDLPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFAETDAFDN 153 (230)
T ss_dssp EESESSHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHH
T ss_pred EEeeeccchhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhccchhhhhHHHHHHHHhh
Confidence 999851 0 00000000 00 00000000 0000000000 0
Q ss_pred -----cccCCccccCCCCCCCCCCEEEEecCCCCccChhHHHHHHHHCCCCCCceEecCCC
Q psy4394 231 -----IMGLSTLENIDKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPRPVEPLWVEGLS 286 (286)
Q Consensus 231 -----~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~ga~ 286 (286)
.......+....+.++++|+++++|++|.++|++.+..+.+.+++. +++.++++|
T Consensus 154 ~~~~~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~~~-~~~~~~~~G 213 (230)
T PF00561_consen 154 MFWNALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIPNS-QLVLIEGSG 213 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHSTTE-EEEEETTCC
T ss_pred hccccccccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcCCC-EEEECCCCC
Confidence 0001111223445679999999999999999999999988888886 888999865
No 91
>KOG1515|consensus
Probab=99.58 E-value=1.5e-13 Score=114.54 Aligned_cols=130 Identities=22% Similarity=0.254 Sum_probs=102.6
Q ss_pred EEEeccCCCEEEEEEEeec---C-CCCeEEEEecCCcccc-----chhhHHHHhhccccceeEEEeeccCcCCCCccCCC
Q psy4394 69 FFTRTSRGNRLACMFMKCS---P-NARFTILFSHGNAVDI-----GQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGIST 139 (286)
Q Consensus 69 ~~~~~~~g~~l~~~~~~~~---~-~~~p~vv~~HG~~~~~-----~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~ 139 (286)
..+.......+..++|.|. . .+.|+|||+||+|.-. ..+..+...++.+.+..|+++|| | -.
T Consensus 64 ~dv~~~~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdY-----R----LA 134 (336)
T KOG1515|consen 64 KDVTIDPFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDY-----R----LA 134 (336)
T ss_pred eeeEecCCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCc-----c----cC
Confidence 3344455667888888883 2 4679999999998643 34667888888888999999999 5 34
Q ss_pred CCCChhhHHHHHHHHHHHHHHH----hCCCCCcEEEEEeecChHHHHHHHhhc--------CccEEEEeCCCCccccccc
Q psy4394 140 GRPSEKNLYADIDAAWNTLRTR----YGISPENIILYGQSIGTVPTIDLASRY--------QVGAVILHSPLMSGMRVAF 207 (286)
Q Consensus 140 ~~~~~~~~~~d~~~~~~~l~~~----~~~~~~~i~l~G~S~Gg~~a~~~a~~~--------~i~~~v~~~p~~~~~~~~~ 207 (286)
++...+..++|..+++.|+.++ ++.|+++++|+|-|.||.+|..++.+. ++++.|++.|+..+.....
T Consensus 135 PEh~~Pa~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~~~ 214 (336)
T KOG1515|consen 135 PEHPFPAAYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDRTE 214 (336)
T ss_pred CCCCCCccchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCCCC
Confidence 4555677789999999999885 578999999999999999998887653 7899999999987554443
No 92
>KOG2984|consensus
Probab=99.58 E-value=6.7e-15 Score=110.26 Aligned_cols=200 Identities=18% Similarity=0.175 Sum_probs=130.2
Q ss_pred cCCCEEEEEEEeecCCCCeEEEEecCCc-cccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCC---ChhhHHH
Q psy4394 74 SRGNRLACMFMKCSPNARFTILFSHGNA-VDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRP---SEKNLYA 149 (286)
Q Consensus 74 ~~g~~l~~~~~~~~~~~~p~vv~~HG~~-~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~---~~~~~~~ 149 (286)
.+|..+.+.-+. .....|+++.|.- +....|...+..+.+..-+.+++.|. ||+|.|.+.. ..+-+.+
T Consensus 28 vng~ql~y~~~G---~G~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDP-----pGYG~SrPP~Rkf~~~ff~~ 99 (277)
T KOG2984|consen 28 VNGTQLGYCKYG---HGPNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDP-----PGYGTSRPPERKFEVQFFMK 99 (277)
T ss_pred ecCceeeeeecC---CCCceeEecccccccccccCCHHHHhcCCCCceEEEEECC-----CCCCCCCCCcccchHHHHHH
Confidence 367788777653 2334577888854 45577888998888776799999999 9999997653 2234457
Q ss_pred HHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc--CccEEEEeCCCCccc---cccccccc--ccccc------
Q psy4394 150 DIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY--QVGAVILHSPLMSGM---RVAFPRTK--RTWFF------ 216 (286)
Q Consensus 150 d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~~~~---~~~~~~~~--~~~~~------ 216 (286)
|.+.+++-++.. +..++.++|+|-||..|+.+|+++ .|..+|+.+...... .+.+..++ ..|..
T Consensus 100 Da~~avdLM~aL---k~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma~kgiRdv~kWs~r~R~P~ 176 (277)
T KOG2984|consen 100 DAEYAVDLMEAL---KLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMAFKGIRDVNKWSARGRQPY 176 (277)
T ss_pred hHHHHHHHHHHh---CCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHHHhchHHHhhhhhhhcchH
Confidence 888888877665 455999999999999999999998 888888876543211 11111110 11111
Q ss_pred -cccchhhhcccccc-------cccCCccc-cCCCCCCCCCCEEEEecCCCCccChhHHHHHHHHCCCCCCceEecCC
Q psy4394 217 -DVFPRVIFANVKTP-------IMGLSTLE-NIDKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPRPVEPLWVEGL 285 (286)
Q Consensus 217 -~~~~~~~~~~~~~~-------~~~~~~~~-~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~ga 285 (286)
+.+....+...+.. +.....-+ -...+.+++||+||+||+.|++++-.++.-+-...+.+ ++.+.|.+
T Consensus 177 e~~Yg~e~f~~~wa~wvD~v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~~~a-~~~~~peG 253 (277)
T KOG2984|consen 177 EDHYGPETFRTQWAAWVDVVDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLKSLA-KVEIHPEG 253 (277)
T ss_pred HHhcCHHHHHHHHHHHHHHHHHHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCCCCccchhhhcccc-eEEEccCC
Confidence 11111111110000 11111111 12456889999999999999999999988777766655 77777765
No 93
>KOG1553|consensus
Probab=99.56 E-value=2.5e-15 Score=121.27 Aligned_cols=184 Identities=26% Similarity=0.350 Sum_probs=138.7
Q ss_pred CccccEEEeccCCCEEEEEEEeec----CCCCeEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccCCC
Q psy4394 64 SNIEGFFTRTSRGNRLACMFMKCS----PNARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGIST 139 (286)
Q Consensus 64 ~~~~~~~~~~~~g~~l~~~~~~~~----~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~ 139 (286)
.+.++.++++.||.+|...+.... ++.+..||++-|+.+-.+- ..+..-+ ++||.|+..+. ||++.|.
T Consensus 212 ~NG~R~kiks~dgneiDtmF~d~r~n~~~ngq~LvIC~EGNAGFYEv--G~m~tP~-~lgYsvLGwNh-----PGFagST 283 (517)
T KOG1553|consen 212 KNGQRLKIKSSDGNEIDTMFLDGRPNQSGNGQDLVICFEGNAGFYEV--GVMNTPA-QLGYSVLGWNH-----PGFAGST 283 (517)
T ss_pred CCCeEEEEeecCCcchhheeecCCCCCCCCCceEEEEecCCccceEe--eeecChH-HhCceeeccCC-----CCccccC
Confidence 356778899999999988877542 3346789999998763321 1222222 45999999999 9999999
Q ss_pred CCCChhhHHHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc-CccEEEEeCCCCcccccccccccccccccc
Q psy4394 140 GRPSEKNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY-QVGAVILHSPLMSGMRVAFPRTKRTWFFDV 218 (286)
Q Consensus 140 ~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-~i~~~v~~~p~~~~~~~~~~~~~~~~~~~~ 218 (286)
+.+...+...-+.+++++..+.+++..+.|+++|+|.||..++++|..+ +++++|+.+.|.|..-.....++..
T Consensus 284 G~P~p~n~~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPdVkavvLDAtFDDllpLAl~rMP~~----- 358 (517)
T KOG1553|consen 284 GLPYPVNTLNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPDVKAVVLDATFDDLLPLALFRMPTF----- 358 (517)
T ss_pred CCCCcccchHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCCceEEEeecchhhhhhHHhhhchHH-----
Confidence 9988878778888999999999999999999999999999999999999 9999999999988655444433322
Q ss_pred cchhhhcccccccccCCccccCCCCCCCCCCEEEEecCCCCccChh
Q psy4394 219 FPRVIFANVKTPIMGLSTLENIDKVPKVTSPVLVIHGTEDEVIDLS 264 (286)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~ 264 (286)
+..............+..+.+.+.+.|+.+|.-.+|+++...
T Consensus 359 ----~~giV~~aiRnh~NLnnaell~ry~GPi~lIRRt~dEIitt~ 400 (517)
T KOG1553|consen 359 ----FSGIVEHAIRNHMNLNNAELLARYKGPIRLIRRTQDEIITTA 400 (517)
T ss_pred ----HHHHHHHHHHHhcccchHHHHHhhcCchhHhhhhhHhhhhcc
Confidence 222222222223333455666778899999999999988765
No 94
>COG4099 Predicted peptidase [General function prediction only]
Probab=99.53 E-value=8.6e-14 Score=110.36 Aligned_cols=160 Identities=21% Similarity=0.276 Sum_probs=107.2
Q ss_pred ccCCCEEEEEEEeec----CCCC-eEEEEecCCccccchhhHHH-------HhhccccceeEEEeeccCcCCCC-ccCCC
Q psy4394 73 TSRGNRLACMFMKCS----PNAR-FTILFSHGNAVDIGQMSSFF-------TGLGSRINCNIFSYDYSGYDYSG-YGIST 139 (286)
Q Consensus 73 ~~~g~~l~~~~~~~~----~~~~-p~vv~~HG~~~~~~~~~~~~-------~~l~~~~g~~vi~~d~~~~~~~G-~G~s~ 139 (286)
...|.+|.+.++.|+ +++. |.|||+||.+.......... .....+.++-|+++.| -- +..++
T Consensus 168 ~~tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy-----~~if~d~e 242 (387)
T COG4099 168 ESTGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQY-----NPIFADSE 242 (387)
T ss_pred cccCceeeEEEecccccCCCCccccEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEcccc-----cccccccc
Confidence 356889999999883 3444 99999999876543322211 1111223456677665 11 11111
Q ss_pred CCCChhhHHHHHHHHH-HHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc--CccEEEEeCCCCcccccccccccccccc
Q psy4394 140 GRPSEKNLYADIDAAW-NTLRTRYGISPENIILYGQSIGTVPTIDLASRY--QVGAVILHSPLMSGMRVAFPRTKRTWFF 216 (286)
Q Consensus 140 ~~~~~~~~~~d~~~~~-~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~~~~~~~~~~~~~~~~~ 216 (286)
. ...........++ +-+.+++++|.+||+++|.|+||+.++.++.++ .+.+.+.+++--+...
T Consensus 243 ~--~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~d~v~------------ 308 (387)
T COG4099 243 E--KTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGGDRVY------------ 308 (387)
T ss_pred c--ccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCCchhh------------
Confidence 1 1122333334444 478889999999999999999999999999998 8888898887544100
Q ss_pred cccchhhhcccccccccCCccccCCCCCCCCCCEEEEecCCCCccChhHHHHHHHHCCC
Q psy4394 217 DVFPRVIFANVKTPIMGLSTLENIDKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPR 275 (286)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~ 275 (286)
..+.++ +.|++++|+.+|.++|.+.++-+++.++.
T Consensus 309 ----------------------lv~~lk--~~piWvfhs~dDkv~Pv~nSrv~y~~lk~ 343 (387)
T COG4099 309 ----------------------LVRTLK--KAPIWVFHSSDDKVIPVSNSRVLYERLKA 343 (387)
T ss_pred ----------------------hhhhhc--cCceEEEEecCCCccccCcceeehHHHHh
Confidence 112222 58999999999999999999888877654
No 95
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.50 E-value=2.9e-12 Score=102.15 Aligned_cols=166 Identities=17% Similarity=0.157 Sum_probs=112.6
Q ss_pred cCCCCeEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCCChhhHHHHHHHHHHHHHHHh----
Q psy4394 87 SPNARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSEKNLYADIDAAWNTLRTRY---- 162 (286)
Q Consensus 87 ~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~~~~~~~d~~~~~~~l~~~~---- 162 (286)
+.+..|+|||+||+.....+|...+++++. .||.|+++|+ ...+. .......+++.++++|+.+..
T Consensus 13 ~~g~yPVv~f~~G~~~~~s~Ys~ll~hvAS-hGyIVV~~d~-----~~~~~----~~~~~~~~~~~~vi~Wl~~~L~~~l 82 (259)
T PF12740_consen 13 SAGTYPVVLFLHGFLLINSWYSQLLEHVAS-HGYIVVAPDL-----YSIGG----PDDTDEVASAAEVIDWLAKGLESKL 82 (259)
T ss_pred CCCCcCEEEEeCCcCCCHHHHHHHHHHHHh-CceEEEEecc-----cccCC----CCcchhHHHHHHHHHHHHhcchhhc
Confidence 456789999999999777778889999985 5999999997 33221 223344677888888887642
Q ss_pred ----CCCCCcEEEEEeecChHHHHHHHhhc-------CccEEEEeCCCCcccccccccccccccccccchhhhccccccc
Q psy4394 163 ----GISPENIILYGQSIGTVPTIDLASRY-------QVGAVILHSPLMSGMRVAFPRTKRTWFFDVFPRVIFANVKTPI 231 (286)
Q Consensus 163 ----~~~~~~i~l~G~S~Gg~~a~~~a~~~-------~i~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (286)
..|-+++.|.|||.||-+|..++..+ ++++++++.|+... .......+ ..+.
T Consensus 83 ~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVdG~-~~~~~~~P-----~v~~----------- 145 (259)
T PF12740_consen 83 PLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVDGM-SKGSQTEP-----PVLT----------- 145 (259)
T ss_pred cccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEecccccc-ccccCCCC-----cccc-----------
Confidence 23667999999999999999888775 79999999998731 11100000 0000
Q ss_pred ccCCccccCCCCCCCCCCEEEEecCCCC---------ccChh-HHHHHHHHCCCCCCceEecCCC
Q psy4394 232 MGLSTLENIDKVPKVTSPVLVIHGTEDE---------VIDLS-HGIAIYERCPRPVEPLWVEGLS 286 (286)
Q Consensus 232 ~~~~~~~~~~~~~~i~~Pvlii~G~~D~---------~v~~~-~~~~l~~~~~~~~~~~~~~ga~ 286 (286)
.....-+...|+++|...-+. -.|.. .-++++++++.+.-.+..+++|
T Consensus 146 -------~~p~s~~~~~P~lviGtGLg~~~~~~~~~~CaP~g~n~~~Ff~~~~~p~~~~v~~~~G 203 (259)
T PF12740_consen 146 -------YTPQSFDFSMPALVIGTGLGGEPRNPLFPPCAPAGVNYREFFDECKPPSWHFVAKDYG 203 (259)
T ss_pred -------CcccccCCCCCeEEEecccCcccccccCCCCCCCCCCHHHHHHhcCCCEEEEEeCCCC
Confidence 111112346999999777664 22332 6688899998875455555544
No 96
>KOG2382|consensus
Probab=99.49 E-value=4.8e-13 Score=108.68 Aligned_cols=191 Identities=16% Similarity=0.194 Sum_probs=123.7
Q ss_pred CCCCeEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCCC--CChhhHHHHHHHHHHHHHHHhCCC
Q psy4394 88 PNARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGR--PSEKNLYADIDAAWNTLRTRYGIS 165 (286)
Q Consensus 88 ~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~--~~~~~~~~d~~~~~~~l~~~~~~~ 165 (286)
....|.++++||.-++...|..+...++...+-.|+++|. |.||.|... .+...+.+|+..+++........+
T Consensus 49 ~~~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~-----RnHG~Sp~~~~h~~~~ma~dv~~Fi~~v~~~~~~~ 123 (315)
T KOG2382|consen 49 LERAPPAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDV-----RNHGSSPKITVHNYEAMAEDVKLFIDGVGGSTRLD 123 (315)
T ss_pred cCCCCceEEecccccCCCCHHHHHHHhcccccCceEEEec-----ccCCCCccccccCHHHHHHHHHHHHHHcccccccC
Confidence 3567999999999999999999999999999999999999 999998754 345667788888888887654333
Q ss_pred CCcEEEEEeecCh-HHHHHHHhhc--CccEEEEe--CCCCcccc-----cccc-------c----ccccccc--------
Q psy4394 166 PENIILYGQSIGT-VPTIDLASRY--QVGAVILH--SPLMSGMR-----VAFP-------R----TKRTWFF-------- 216 (286)
Q Consensus 166 ~~~i~l~G~S~Gg-~~a~~~a~~~--~i~~~v~~--~p~~~~~~-----~~~~-------~----~~~~~~~-------- 216 (286)
++.++|||||| .+++..+... .+..+|+. +|..-... ..+. . ...++..
T Consensus 124 --~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~~~~ 201 (315)
T KOG2382|consen 124 --PVVLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGVSRGRKEALKSLIEVGF 201 (315)
T ss_pred --CceecccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHhccccccccccHHHHHHHHHHHhc
Confidence 99999999999 4444444444 55554443 44211000 0000 0 0000000
Q ss_pred -cccchhhhcccc-ccc-----------------ccCCccccCCCC--CCCCCCEEEEecCCCCccChhHHHHHHHHCCC
Q psy4394 217 -DVFPRVIFANVK-TPI-----------------MGLSTLENIDKV--PKVTSPVLVIHGTEDEVIDLSHGIAIYERCPR 275 (286)
Q Consensus 217 -~~~~~~~~~~~~-~~~-----------------~~~~~~~~~~~~--~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~ 275 (286)
..+.+++..+.. ... ..+...+....+ .....|||+++|.++..++.++-.++.+.++.
T Consensus 202 d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvlfi~g~~S~fv~~~~~~~~~~~fp~ 281 (315)
T KOG2382|consen 202 DNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGPVLFIKGLQSKFVPDEHYPRMEKIFPN 281 (315)
T ss_pred chHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccceeEEecCCCCCcChhHHHHHHHhccc
Confidence 011111111111 000 001111112222 55678999999999999999999998888887
Q ss_pred CCCceEecCCC
Q psy4394 276 PVEPLWVEGLS 286 (286)
Q Consensus 276 ~~~~~~~~ga~ 286 (286)
. ++.++++||
T Consensus 282 ~-e~~~ld~aG 291 (315)
T KOG2382|consen 282 V-EVHELDEAG 291 (315)
T ss_pred h-heeecccCC
Confidence 5 899999776
No 97
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.49 E-value=7.2e-13 Score=113.95 Aligned_cols=117 Identities=15% Similarity=0.073 Sum_probs=77.0
Q ss_pred CCEEEEEEEee-cCCCCeEEEEecCCccccc-------------hhhHHHHh--hccccceeEEEeeccCcCCCCccCCC
Q psy4394 76 GNRLACMFMKC-SPNARFTILFSHGNAVDIG-------------QMSSFFTG--LGSRINCNIFSYDYSGYDYSGYGIST 139 (286)
Q Consensus 76 g~~l~~~~~~~-~~~~~p~vv~~HG~~~~~~-------------~~~~~~~~--l~~~~g~~vi~~d~~~~~~~G~G~s~ 139 (286)
..+|.|..+.. ...+.++||++|+..++.. +|..++-. ......|-||++|. .|.+.|.
T Consensus 40 ~~~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~-----lG~~~~~ 114 (389)
T PRK06765 40 DVQMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDT-----LCNVQVK 114 (389)
T ss_pred CceEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecc-----cCCCcCC
Confidence 35566777654 3445689999999877541 23333221 12233699999999 5544311
Q ss_pred -------CC----C--------Chh-hHHHHHHHHHHHHHHHhCCCCCcEE-EEEeecChHHHHHHHhhc--CccEEEEe
Q psy4394 140 -------GR----P--------SEK-NLYADIDAAWNTLRTRYGISPENII-LYGQSIGTVPTIDLASRY--QVGAVILH 196 (286)
Q Consensus 140 -------~~----~--------~~~-~~~~d~~~~~~~l~~~~~~~~~~i~-l~G~S~Gg~~a~~~a~~~--~i~~~v~~ 196 (286)
++ + .++ -..+|..+.+..+.++++++ ++. ++||||||++|+.+|.++ +++++|++
T Consensus 115 ~p~~g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~--~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~i 192 (389)
T PRK06765 115 DPNVITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIA--RLHAVMGPSMGGMQAQEWAVHYPHMVERMIGV 192 (389)
T ss_pred CCCCCCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCC--CceEEEEECHHHHHHHHHHHHChHhhheEEEE
Confidence 00 0 111 23466666666666777775 775 999999999999999998 89999998
Q ss_pred CCC
Q psy4394 197 SPL 199 (286)
Q Consensus 197 ~p~ 199 (286)
+..
T Consensus 193 a~~ 195 (389)
T PRK06765 193 IGN 195 (389)
T ss_pred ecC
Confidence 643
No 98
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=99.49 E-value=3.4e-13 Score=109.74 Aligned_cols=123 Identities=28% Similarity=0.428 Sum_probs=101.4
Q ss_pred cccCCccccEEEeccCCCEEEEEEEe-ecCCCCeEEEEecCCccccchh------hHHHHhhccccceeEEEeeccCcCC
Q psy4394 60 DNERSNIEGFFTRTSRGNRLACMFMK-CSPNARFTILFSHGNAVDIGQM------SSFFTGLGSRINCNIFSYDYSGYDY 132 (286)
Q Consensus 60 ~~~~~~~~~~~~~~~~g~~l~~~~~~-~~~~~~p~vv~~HG~~~~~~~~------~~~~~~l~~~~g~~vi~~d~~~~~~ 132 (286)
........++.++. |+..+...... |+.++...||++-|+++..+.. ...+..+++..+.+|+.++|
T Consensus 106 ~~~~~~~kRv~Iq~-D~~~IDt~~I~~~~a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNY----- 179 (365)
T PF05677_consen 106 DDEVSSVKRVPIQY-DGVKIDTMAIHQPEAKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNY----- 179 (365)
T ss_pred cccccceeeEEEee-CCEEEEEEEeeCCCCCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECC-----
Confidence 34444566677755 89999877665 4556778999999999876652 25677777788999999999
Q ss_pred CCccCCCCCCChhhHHHHHHHHHHHHHHHh-CCCCCcEEEEEeecChHHHHHHHhhc
Q psy4394 133 SGYGISTGRPSEKNLYADIDAAWNTLRTRY-GISPENIILYGQSIGTVPTIDLASRY 188 (286)
Q Consensus 133 ~G~G~s~~~~~~~~~~~d~~~~~~~l~~~~-~~~~~~i~l~G~S~Gg~~a~~~a~~~ 188 (286)
||.|.|.+.++..++..|..+.++|++++. |+.+++|++.|||+||.++..++.++
T Consensus 180 pGVg~S~G~~s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 180 PGVGSSTGPPSRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred CccccCCCCCCHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 999999999999999999999999999854 67788999999999999988877665
No 99
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.47 E-value=3.7e-12 Score=92.11 Aligned_cols=168 Identities=18% Similarity=0.298 Sum_probs=110.6
Q ss_pred EeecCCCCeEEEEecCCccccch--hhHHHHhhccccceeEEEeeccCcCCCCccCCCCCCChhhHHHHHHHHHHHHHHH
Q psy4394 84 MKCSPNARFTILFSHGNAVDIGQ--MSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSEKNLYADIDAAWNTLRTR 161 (286)
Q Consensus 84 ~~~~~~~~p~vv~~HG~~~~~~~--~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~~~~~~~d~~~~~~~l~~~ 161 (286)
+.|.+....+||+.||.+.+.+. +......++ ..|+.|..+++...-.|-.|...+.+...........++..+...
T Consensus 7 ~~pag~~~~tilLaHGAGasmdSt~m~~~a~~la-~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~ 85 (213)
T COG3571 7 FDPAGPAPVTILLAHGAGASMDSTSMTAVAAALA-RRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAG 85 (213)
T ss_pred cCCCCCCCEEEEEecCCCCCCCCHHHHHHHHHHH-hCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhc
Confidence 33444556789999998876643 445555566 559999999984443344453333333333334444555555554
Q ss_pred hCCCCCcEEEEEeecChHHHHHHHhhc--CccEEEEeC-CCCcccccccccccccccccccchhhhcccccccccCCccc
Q psy4394 162 YGISPENIILYGQSIGTVPTIDLASRY--QVGAVILHS-PLMSGMRVAFPRTKRTWFFDVFPRVIFANVKTPIMGLSTLE 238 (286)
Q Consensus 162 ~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (286)
. +..++++-|+||||-++..++..- .|+++++++ |+... ..+.. .
T Consensus 86 l--~~gpLi~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhpp------GKPe~-----~------------------- 133 (213)
T COG3571 86 L--AEGPLIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFHPP------GKPEQ-----L------------------- 133 (213)
T ss_pred c--cCCceeeccccccchHHHHHHHhhcCCcceEEEecCccCCC------CCccc-----c-------------------
Confidence 3 556899999999999999888766 889998875 44320 00000 0
Q ss_pred cCCCCCCCCCCEEEEecCCCCccChhHHHHHHHHCCCCCCceEecCCC
Q psy4394 239 NIDKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPRPVEPLWVEGLS 286 (286)
Q Consensus 239 ~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~ga~ 286 (286)
..+++.-+++|+||.||+.|++-..++.. .-.+....+++|+++++
T Consensus 134 Rt~HL~gl~tPtli~qGtrD~fGtr~~Va--~y~ls~~iev~wl~~ad 179 (213)
T COG3571 134 RTEHLTGLKTPTLITQGTRDEFGTRDEVA--GYALSDPIEVVWLEDAD 179 (213)
T ss_pred hhhhccCCCCCeEEeecccccccCHHHHH--hhhcCCceEEEEeccCc
Confidence 34667788999999999999988776652 23345557899999874
No 100
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.44 E-value=2.5e-12 Score=123.80 Aligned_cols=103 Identities=12% Similarity=0.117 Sum_probs=68.0
Q ss_pred CCeEEEEecCCccccchhhHH-----HHhhccccceeEEEeeccCcCCCCccCCCCC--CChhhHHHHHHHHHHHHHHHh
Q psy4394 90 ARFTILFSHGNAVDIGQMSSF-----FTGLGSRINCNIFSYDYSGYDYSGYGISTGR--PSEKNLYADIDAAWNTLRTRY 162 (286)
Q Consensus 90 ~~p~vv~~HG~~~~~~~~~~~-----~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~--~~~~~~~~d~~~~~~~l~~~~ 162 (286)
..+.||++||++.+...|... +..|.+ .||+|+++|+ ...+..... .+..+...++.++++.+++..
T Consensus 66 ~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~-~g~~v~~~d~-----G~~~~~~~~~~~~l~~~i~~l~~~l~~v~~~~ 139 (994)
T PRK07868 66 VGPPVLMVHPMMMSADMWDVTRDDGAVGILHR-AGLDPWVIDF-----GSPDKVEGGMERNLADHVVALSEAIDTVKDVT 139 (994)
T ss_pred CCCcEEEECCCCCCccceecCCcccHHHHHHH-CCCEEEEEcC-----CCCChhHcCccCCHHHHHHHHHHHHHHHHHhh
Confidence 458899999999887777643 666664 4999999998 211111111 122222333444444444442
Q ss_pred CCCCCcEEEEEeecChHHHHHHHhhc---CccEEEEeCCCCc
Q psy4394 163 GISPENIILYGQSIGTVPTIDLASRY---QVGAVILHSPLMS 201 (286)
Q Consensus 163 ~~~~~~i~l~G~S~Gg~~a~~~a~~~---~i~~~v~~~p~~~ 201 (286)
.++++++||||||.+++.+++.+ +|+++|++++..+
T Consensus 140 ---~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d 178 (994)
T PRK07868 140 ---GRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVD 178 (994)
T ss_pred ---CCceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccc
Confidence 34899999999999998887643 7999998766544
No 101
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.44 E-value=1.5e-12 Score=101.46 Aligned_cols=186 Identities=15% Similarity=0.195 Sum_probs=118.8
Q ss_pred CCCCeEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCCChhhHHHHHHHHHHHHHHHhC--CC
Q psy4394 88 PNARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSEKNLYADIDAAWNTLRTRYG--IS 165 (286)
Q Consensus 88 ~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~~~~~~~d~~~~~~~l~~~~~--~~ 165 (286)
+..++.++++|-.|++...++.+...+-. .+.++++++ ||+|...+++.. .|+.++++.+..... ..
T Consensus 4 ~~~~~~L~cfP~AGGsa~~fr~W~~~lp~--~iel~avql-----PGR~~r~~ep~~----~di~~Lad~la~el~~~~~ 72 (244)
T COG3208 4 PGARLRLFCFPHAGGSASLFRSWSRRLPA--DIELLAVQL-----PGRGDRFGEPLL----TDIESLADELANELLPPLL 72 (244)
T ss_pred CCCCceEEEecCCCCCHHHHHHHHhhCCc--hhheeeecC-----CCcccccCCccc----ccHHHHHHHHHHHhccccC
Confidence 34567889999888888888888887653 589999999 999977655443 455556666655543 33
Q ss_pred CCcEEEEEeecChHHHHHHHhhc-----CccEEEEeC---CCCcccccccccc--------------cccccc-cccchh
Q psy4394 166 PENIILYGQSIGTVPTIDLASRY-----QVGAVILHS---PLMSGMRVAFPRT--------------KRTWFF-DVFPRV 222 (286)
Q Consensus 166 ~~~i~l~G~S~Gg~~a~~~a~~~-----~i~~~v~~~---p~~~~~~~~~~~~--------------~~~~~~-~~~~~~ 222 (286)
..++.++||||||++|..+|.+. ...++.+.+ |..+......... +...+. ..+...
T Consensus 73 d~P~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i~~~~D~~~l~~l~~lgG~p~e~led~El~~l 152 (244)
T COG3208 73 DAPFALFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQIHHLDDADFLADLVDLGGTPPELLEDPELMAL 152 (244)
T ss_pred CCCeeecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCccCCCHHHHHHHHHHhCCCChHHhcCHHHHHH
Confidence 45899999999999999999876 445555543 2111100000000 000000 001111
Q ss_pred hhcccccccccCCccccCCCCCCCCCCEEEEecCCCCccChhHHHHHHHHCCCCCCceEecCC
Q psy4394 223 IFANVKTPIMGLSTLENIDKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPRPVEPLWVEGL 285 (286)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~ga 285 (286)
+.............++.... ..++||+..+.|++|..|..++...+.+..++..++..++|+
T Consensus 153 ~LPilRAD~~~~e~Y~~~~~-~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~~f~l~~fdGg 214 (244)
T COG3208 153 FLPILRADFRALESYRYPPP-APLACPIHAFGGEKDHEVSRDELGAWREHTKGDFTLRVFDGG 214 (244)
T ss_pred HHHHHHHHHHHhcccccCCC-CCcCcceEEeccCcchhccHHHHHHHHHhhcCCceEEEecCc
Confidence 11111111222222222222 467899999999999999999999999999988899999985
No 102
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.43 E-value=1.2e-12 Score=121.17 Aligned_cols=167 Identities=16% Similarity=0.121 Sum_probs=109.6
Q ss_pred HhhccccceeEEEeeccCcCCCCccCCCCCCCh--hhHHHHHHHHHHHHHHHh--------------CCCCCcEEEEEee
Q psy4394 112 TGLGSRINCNIFSYDYSGYDYSGYGISTGRPSE--KNLYADIDAAWNTLRTRY--------------GISPENIILYGQS 175 (286)
Q Consensus 112 ~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~~--~~~~~d~~~~~~~l~~~~--------------~~~~~~i~l~G~S 175 (286)
..++ ..||+|+.+|. ||.|.|++.... ....+|..++++|+..+. .....+|+++|.|
T Consensus 273 ~~~~-~rGYaVV~~D~-----RGtg~SeG~~~~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~S 346 (767)
T PRK05371 273 DYFL-PRGFAVVYVSG-----IGTRGSDGCPTTGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKS 346 (767)
T ss_pred HHHH-hCCeEEEEEcC-----CCCCCCCCcCccCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEc
Confidence 3444 55999999999 999999987433 445689999999998531 2234699999999
Q ss_pred cChHHHHHHHhhc--CccEEEEeCCCCccccccccc----ccccccc---cccchh-----------------h---hcc
Q psy4394 176 IGTVPTIDLASRY--QVGAVILHSPLMSGMRVAFPR----TKRTWFF---DVFPRV-----------------I---FAN 226 (286)
Q Consensus 176 ~Gg~~a~~~a~~~--~i~~~v~~~p~~~~~~~~~~~----~~~~~~~---~~~~~~-----------------~---~~~ 226 (286)
+||++++.+|... .++++|..+++.+........ ....|.. +.+... . ...
T Consensus 347 Y~G~~~~~aAa~~pp~LkAIVp~a~is~~yd~yr~~G~~~~~~g~~ged~d~l~~~~~~r~~~~~~~~~~~~~~~~~~~~ 426 (767)
T PRK05371 347 YLGTLPNAVATTGVEGLETIIPEAAISSWYDYYRENGLVRAPGGYQGEDLDVLAELTYSRNLLAGDYLRHNEACEKLLAE 426 (767)
T ss_pred HHHHHHHHHHhhCCCcceEEEeeCCCCcHHHHhhcCCceeccCCcCCcchhhHHHHhhhcccCcchhhcchHHHHHHHhh
Confidence 9999999988876 899999998887632221110 0000100 000000 0 000
Q ss_pred ccc--------ccccCCccccCCCCCCCCCCEEEEecCCCCccChhHHHHHHHHCCC---CCCceEecC
Q psy4394 227 VKT--------PIMGLSTLENIDKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPR---PVEPLWVEG 284 (286)
Q Consensus 227 ~~~--------~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~---~~~~~~~~g 284 (286)
... ........+....+.++++|+|++||..|..++++++.+++++++. ++++++.++
T Consensus 427 ~~~~~~~~~~~y~~fW~~rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~~g 495 (767)
T PRK05371 427 LTAAQDRKTGDYNDFWDDRNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFLHQG 495 (767)
T ss_pred hhhhhhhcCCCccHHHHhCCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEeCC
Confidence 000 0001122344566778999999999999999999999999998854 456655554
No 103
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.43 E-value=8.1e-13 Score=108.78 Aligned_cols=108 Identities=20% Similarity=0.163 Sum_probs=81.1
Q ss_pred CCCeEEEEecCCcccc-chhhHHH-HhhccccceeEEEeeccCcCCCCccCCCCC---CChhhHHHHHHHHHHHHHHHhC
Q psy4394 89 NARFTILFSHGNAVDI-GQMSSFF-TGLGSRINCNIFSYDYSGYDYSGYGISTGR---PSEKNLYADIDAAWNTLRTRYG 163 (286)
Q Consensus 89 ~~~p~vv~~HG~~~~~-~~~~~~~-~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~---~~~~~~~~d~~~~~~~l~~~~~ 163 (286)
..+|++|++||+.++. ..|...+ ..+..+.+++|+++|+ ++++..... .......+++..+++++.+..+
T Consensus 34 ~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~-----~~~~~~~y~~a~~~~~~v~~~la~~l~~L~~~~g 108 (275)
T cd00707 34 PSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDW-----GRGANPNYPQAVNNTRVVGAELAKFLDFLVDNTG 108 (275)
T ss_pred CCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEEC-----ccccccChHHHHHhHHHHHHHHHHHHHHHHHhcC
Confidence 4568999999998876 4555444 3454445899999999 887332211 1122334678889999988766
Q ss_pred CCCCcEEEEEeecChHHHHHHHhhc--CccEEEEeCCCCc
Q psy4394 164 ISPENIILYGQSIGTVPTIDLASRY--QVGAVILHSPLMS 201 (286)
Q Consensus 164 ~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~~ 201 (286)
++.++++++|||+||.+|..++.+. ++++++.+.|...
T Consensus 109 ~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p 148 (275)
T cd00707 109 LSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGP 148 (275)
T ss_pred CChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCcc
Confidence 6777999999999999999999887 7999999988654
No 104
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.43 E-value=1.7e-12 Score=103.60 Aligned_cols=128 Identities=19% Similarity=0.179 Sum_probs=94.4
Q ss_pred ccCCCEEEEEEEeec--CCCCeEEEEecCCccccchhhH--HHHhhccccceeEEEeecc--CcCCCCccCCCCCC---C
Q psy4394 73 TSRGNRLACMFMKCS--PNARFTILFSHGNAVDIGQMSS--FFTGLGSRINCNIFSYDYS--GYDYSGYGISTGRP---S 143 (286)
Q Consensus 73 ~~~g~~l~~~~~~~~--~~~~p~vv~~HG~~~~~~~~~~--~~~~l~~~~g~~vi~~d~~--~~~~~G~G~s~~~~---~ 143 (286)
..+|.+..++++.|. +++.|+||++||..++...+.. -+..++++.|+.|+.+|-. .++..+.+.+.++. .
T Consensus 41 ~~~g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~~~~ 120 (312)
T COG3509 41 DVNGLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPADRRR 120 (312)
T ss_pred ccCCCccceEEEcCCCCCCCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCccccccCCCcccccCCcccccC
Confidence 347888899988873 3455899999998887755543 3578888889999999542 22233444442222 2
Q ss_pred hhhHHHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc--CccEEEEeCCCC
Q psy4394 144 EKNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY--QVGAVILHSPLM 200 (286)
Q Consensus 144 ~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~ 200 (286)
-.+.+..+.+++..+..++++|+.+|++.|.|-||.|+..++..+ .+.++..+++..
T Consensus 121 g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 121 GVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred CccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 234456788999999999999999999999999999999999987 666666665433
No 105
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.42 E-value=1.7e-12 Score=111.92 Aligned_cols=107 Identities=18% Similarity=0.133 Sum_probs=80.9
Q ss_pred CCCeEEEEecCCcccc--chhhH-HHHhhccc-cceeEEEeeccCcCCCCccCCCCCC---ChhhHHHHHHHHHHHHHHH
Q psy4394 89 NARFTILFSHGNAVDI--GQMSS-FFTGLGSR-INCNIFSYDYSGYDYSGYGISTGRP---SEKNLYADIDAAWNTLRTR 161 (286)
Q Consensus 89 ~~~p~vv~~HG~~~~~--~~~~~-~~~~l~~~-~g~~vi~~d~~~~~~~G~G~s~~~~---~~~~~~~d~~~~~~~l~~~ 161 (286)
..+|++|++||++.+. ..|.. +...+... ..++|+++|+ +|+|.+.... ......+++.++++++.+.
T Consensus 39 ~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw-----~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~ 113 (442)
T TIGR03230 39 HETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDW-----LSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEE 113 (442)
T ss_pred CCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEEC-----CCcCCCCCccccccHHHHHHHHHHHHHHHHHh
Confidence 3568999999998653 33554 34444322 2699999999 9999775432 1233447888899999877
Q ss_pred hCCCCCcEEEEEeecChHHHHHHHhhc--CccEEEEeCCCC
Q psy4394 162 YGISPENIILYGQSIGTVPTIDLASRY--QVGAVILHSPLM 200 (286)
Q Consensus 162 ~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~ 200 (286)
.+++.++++|+||||||.+|..++... ++..++++.|..
T Consensus 114 ~gl~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAg 154 (442)
T TIGR03230 114 FNYPWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAG 154 (442)
T ss_pred hCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCC
Confidence 777778999999999999999988876 899999998854
No 106
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=99.42 E-value=8.4e-13 Score=114.21 Aligned_cols=236 Identities=16% Similarity=0.188 Sum_probs=157.8
Q ss_pred ccccCCCCceeeeeCCCCCCceEEEecCccccccccccCCccccEEEeccCCCEEEEEEEe-e-cCCCCeEEEEecCCcc
Q psy4394 25 VAFLPPESTYSFTPTESGSSTYHVQFNDKAEWQYGDNERSNIEGFFTRTSRGNRLACMFMK-C-SPNARFTILFSHGNAV 102 (286)
Q Consensus 25 ~~f~~p~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~-~-~~~~~p~vv~~HG~~~ 102 (286)
..|..|...|...... .+++..-.. ..+++. ....+++++.++.||.+|++.++. . +..+.|++|+-.|+-.
T Consensus 359 t~F~tP~~~~r~~~~~---~eLe~ik~~--p~~FDa-~~~~veQ~~atSkDGT~IPYFiv~K~~~~d~~pTll~aYGGF~ 432 (648)
T COG1505 359 TSFTTPSTLYRLDLFG---GELEVIREQ--PVQFDA-DNYEVEQFFATSKDGTRIPYFIVRKGAKKDENPTLLYAYGGFN 432 (648)
T ss_pred ecccCCCceEEEecCC---ceehhhhhc--cCCcCc-cCceEEEEEEEcCCCccccEEEEecCCcCCCCceEEEeccccc
Confidence 3466666666655443 222221111 112222 233467777889999999999985 2 1226789998888654
Q ss_pred cc--chhhHHHHhhccccceeEEEeeccCcCCCCccCCCCC-------CChhhHHHHHHHHHHHHHHHhCCCCCcEEEEE
Q psy4394 103 DI--GQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGR-------PSEKNLYADIDAAWNTLRTRYGISPENIILYG 173 (286)
Q Consensus 103 ~~--~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~-------~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G 173 (286)
-. ..+........ +.|...+..+. ||=|.-.+. ...+...+|..++.+.|.++.-..++++.+.|
T Consensus 433 vsltP~fs~~~~~WL-erGg~~v~ANI-----RGGGEfGp~WH~Aa~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~G 506 (648)
T COG1505 433 ISLTPRFSGSRKLWL-ERGGVFVLANI-----RGGGEFGPEWHQAGMKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQG 506 (648)
T ss_pred cccCCccchhhHHHH-hcCCeEEEEec-----ccCCccCHHHHHHHhhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhcc
Confidence 22 23444443333 45888889999 887765533 34456679999999999999656788999999
Q ss_pred eecChHHHHHHHhhc--CccEEEEeCCCCcccccccccccccccccccchhhhcccccccccCCccccCCCCCCC--CCC
Q psy4394 174 QSIGTVPTIDLASRY--QVGAVILHSPLMSGMRVAFPRTKRTWFFDVFPRVIFANVKTPIMGLSTLENIDKVPKV--TSP 249 (286)
Q Consensus 174 ~S~Gg~~a~~~a~~~--~i~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~P 249 (286)
.|-||.+......++ .+.++|+-.|+.|+++...-.....|..+. .....-.....+..++|.+.++.- -.|
T Consensus 507 gSNGGLLvg~alTQrPelfgA~v~evPllDMlRYh~l~aG~sW~~EY----G~Pd~P~d~~~l~~YSPy~nl~~g~kYP~ 582 (648)
T COG1505 507 GSNGGLLVGAALTQRPELFGAAVCEVPLLDMLRYHLLTAGSSWIAEY----GNPDDPEDRAFLLAYSPYHNLKPGQKYPP 582 (648)
T ss_pred CCCCceEEEeeeccChhhhCceeeccchhhhhhhcccccchhhHhhc----CCCCCHHHHHHHHhcCchhcCCccccCCC
Confidence 999998887777777 889999999999977654433344443211 011111122345566777776552 369
Q ss_pred EEEEecCCCCccChhHHHHHHHHCCCC
Q psy4394 250 VLVIHGTEDEVIDLSHGIAIYERCPRP 276 (286)
Q Consensus 250 vlii~G~~D~~v~~~~~~~l~~~~~~~ 276 (286)
+||..+..|+.|+|.|+++++.++...
T Consensus 583 ~LITTs~~DDRVHPaHarKfaa~L~e~ 609 (648)
T COG1505 583 TLITTSLHDDRVHPAHARKFAAKLQEV 609 (648)
T ss_pred eEEEcccccccccchHHHHHHHHHHhc
Confidence 999999999999999999999888654
No 107
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.41 E-value=8e-12 Score=109.73 Aligned_cols=200 Identities=11% Similarity=0.032 Sum_probs=127.7
Q ss_pred EEEEEEEeecC--CCCeEEEEecCCcccc-----chhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCCChhhHHHH
Q psy4394 78 RLACMFMKCSP--NARFTILFSHGNAVDI-----GQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSEKNLYAD 150 (286)
Q Consensus 78 ~l~~~~~~~~~--~~~p~vv~~HG~~~~~-----~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~~~~~~~d 150 (286)
.+..+.|.|.. ..+..||+++..-... ..-.++++.+.+ .|+.|+.+|+ ++-+......+.+++++.
T Consensus 200 l~eLiqY~P~te~v~~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~-qG~~VflIsW-----~nP~~~~r~~~ldDYv~~ 273 (560)
T TIGR01839 200 VLELIQYKPITEQQHARPLLVVPPQINKFYIFDLSPEKSFVQYCLK-NQLQVFIISW-----RNPDKAHREWGLSTYVDA 273 (560)
T ss_pred ceEEEEeCCCCCCcCCCcEEEechhhhhhheeecCCcchHHHHHHH-cCCeEEEEeC-----CCCChhhcCCCHHHHHHH
Confidence 34555566632 3346788888865322 223467777775 4999999999 777766666777788888
Q ss_pred HHHHHHHHHHHhCCCCCcEEEEEeecChHHHHH----HHhhc---CccEEEEeCCCCcccccc-ccccc-----------
Q psy4394 151 IDAAWNTLRTRYGISPENIILYGQSIGTVPTID----LASRY---QVGAVILHSPLMSGMRVA-FPRTK----------- 211 (286)
Q Consensus 151 ~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~----~a~~~---~i~~~v~~~p~~~~~~~~-~~~~~----------- 211 (286)
+.++++.+++..+. +++.++|+|+||.+++. +++.+ +|+.++++.+..|..... .....
T Consensus 274 i~~Ald~V~~~tG~--~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~~~g~l~~f~~e~~~~~~e~~ 351 (560)
T TIGR01839 274 LKEAVDAVRAITGS--RDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDSTMESPAALFADEQTLEAAKRR 351 (560)
T ss_pred HHHHHHHHHHhcCC--CCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccCCCCcchhccChHHHHHHHHH
Confidence 99999999998764 49999999999998886 55554 599999887766522100 00000
Q ss_pred ---ccc------------cc--ccc-chhhhcccc-------------cc--------------ccc---CCc------c
Q psy4394 212 ---RTW------------FF--DVF-PRVIFANVK-------------TP--------------IMG---LST------L 237 (286)
Q Consensus 212 ---~~~------------~~--~~~-~~~~~~~~~-------------~~--------------~~~---~~~------~ 237 (286)
... +. +.+ ......... .. +.. +.. .
T Consensus 352 ~~~~G~lpg~~ma~~F~~LrP~dliw~y~v~~yllg~~p~~fdll~Wn~D~t~lPg~~~~e~l~ly~~N~L~~pG~l~v~ 431 (560)
T TIGR01839 352 SYQAGVLDGSEMAKVFAWMRPNDLIWNYWVNNYLLGNEPPAFDILYWNNDTTRLPAAFHGDLLDMFKSNPLTRPDALEVC 431 (560)
T ss_pred HHhcCCcCHHHHHHHHHhcCchhhhHHHHHHHhhcCCCcchhhHHHHhCcCccchHHHHHHHHHHHhcCCCCCCCCEEEC
Confidence 000 00 000 000000000 00 000 000 0
Q ss_pred ccCCCCCCCCCCEEEEecCCCCccChhHHHHHHHHCCCCCCceEecCC
Q psy4394 238 ENIDKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPRPVEPLWVEGL 285 (286)
Q Consensus 238 ~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~ga 285 (286)
...-.+++|++|++++.|+.|.++|++.+.++.+.+.+.++++..+++
T Consensus 432 G~~idL~~I~~Pvl~va~~~DHIvPw~s~~~~~~l~gs~~~fvl~~gG 479 (560)
T TIGR01839 432 GTPIDLKKVKCDSFSVAGTNDHITPWDAVYRSALLLGGKRRFVLSNSG 479 (560)
T ss_pred CEEechhcCCCCeEEEecCcCCcCCHHHHHHHHHHcCCCeEEEecCCC
Confidence 111246789999999999999999999999999999887777777654
No 108
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.40 E-value=3.2e-12 Score=97.27 Aligned_cols=147 Identities=18% Similarity=0.283 Sum_probs=88.8
Q ss_pred EEEecCCcccc-chhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCCChhhHHHHHHHHHHHHHHHhCCCCCcEEEE
Q psy4394 94 ILFSHGNAVDI-GQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSEKNLYADIDAAWNTLRTRYGISPENIILY 172 (286)
Q Consensus 94 vv~~HG~~~~~-~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~ 172 (286)
|+++||++++. ..|..+++.-.... ++|-..++ ..+ +..++++.+.+......++++++
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~------------~~P-------~~~~W~~~l~~~i~~~~~~~ilV 60 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDW------------DNP-------DLDEWVQALDQAIDAIDEPTILV 60 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC--------------TS---------HHHHHHHHHHCCHC-TTTEEEE
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEecccc------------CCC-------CHHHHHHHHHHHHhhcCCCeEEE
Confidence 68999988764 56777777655443 55555444 122 34445555555443234579999
Q ss_pred EeecChHHHHHHH-hhc--CccEEEEeCCCCcccccccccccccccccccchhhhcccccccccCCccccCCCCCCCCCC
Q psy4394 173 GQSIGTVPTIDLA-SRY--QVGAVILHSPLMSGMRVAFPRTKRTWFFDVFPRVIFANVKTPIMGLSTLENIDKVPKVTSP 249 (286)
Q Consensus 173 G~S~Gg~~a~~~a-~~~--~i~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P 249 (286)
|||+|+..++.++ .+. +|+++++++|+.......... . ...+. ... ......|
T Consensus 61 aHSLGc~~~l~~l~~~~~~~v~g~lLVAp~~~~~~~~~~~--~---~~~f~------------------~~p-~~~l~~~ 116 (171)
T PF06821_consen 61 AHSLGCLTALRWLAEQSQKKVAGALLVAPFDPDDPEPFPP--E---LDGFT------------------PLP-RDPLPFP 116 (171)
T ss_dssp EETHHHHHHHHHHHHTCCSSEEEEEEES--SCGCHHCCTC--G---GCCCT------------------TSH-CCHHHCC
T ss_pred EeCHHHHHHHHHHhhcccccccEEEEEcCCCcccccchhh--h---ccccc------------------cCc-ccccCCC
Confidence 9999999999999 443 999999999986510000000 0 00000 111 1233567
Q ss_pred EEEEecCCCCccChhHHHHHHHHCCCCCCceEecCCC
Q psy4394 250 VLVIHGTEDEVIDLSHGIAIYERCPRPVEPLWVEGLS 286 (286)
Q Consensus 250 vlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~ga~ 286 (286)
.+++.+++|+.+|++.++++.+++.. +++.++++|
T Consensus 117 ~~viaS~nDp~vp~~~a~~~A~~l~a--~~~~~~~~G 151 (171)
T PF06821_consen 117 SIVIASDNDPYVPFERAQRLAQRLGA--ELIILGGGG 151 (171)
T ss_dssp EEEEEETTBSSS-HHHHHHHHHHHT---EEEEETS-T
T ss_pred eEEEEcCCCCccCHHHHHHHHHHcCC--CeEECCCCC
Confidence 79999999999999999999999976 578888775
No 109
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.40 E-value=1.6e-12 Score=85.45 Aligned_cols=74 Identities=22% Similarity=0.296 Sum_probs=61.8
Q ss_pred CCEEEEEEEeecCCCCeEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCCC----CChhhHHHHH
Q psy4394 76 GNRLACMFMKCSPNARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGR----PSEKNLYADI 151 (286)
Q Consensus 76 g~~l~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~----~~~~~~~~d~ 151 (286)
|.+|.+..|.|+++++.+|+++||.+.+...+..++..|++ .||.|+++|+ ||||+|.+. ...+.+++|+
T Consensus 1 G~~L~~~~w~p~~~~k~~v~i~HG~~eh~~ry~~~a~~L~~-~G~~V~~~D~-----rGhG~S~g~rg~~~~~~~~v~D~ 74 (79)
T PF12146_consen 1 GTKLFYRRWKPENPPKAVVVIVHGFGEHSGRYAHLAEFLAE-QGYAVFAYDH-----RGHGRSEGKRGHIDSFDDYVDDL 74 (79)
T ss_pred CcEEEEEEecCCCCCCEEEEEeCCcHHHHHHHHHHHHHHHh-CCCEEEEECC-----CcCCCCCCcccccCCHHHHHHHH
Confidence 67899999988766789999999999999999999999985 5999999999 999999875 3445556666
Q ss_pred HHHH
Q psy4394 152 DAAW 155 (286)
Q Consensus 152 ~~~~ 155 (286)
..++
T Consensus 75 ~~~~ 78 (79)
T PF12146_consen 75 HQFI 78 (79)
T ss_pred HHHh
Confidence 6554
No 110
>KOG3043|consensus
Probab=99.40 E-value=5.2e-12 Score=96.63 Aligned_cols=161 Identities=14% Similarity=0.183 Sum_probs=112.9
Q ss_pred EEEEEeecCCCCeEEEEecC-CccccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCC-C----------CChhhH
Q psy4394 80 ACMFMKCSPNARFTILFSHG-NAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTG-R----------PSEKNL 147 (286)
Q Consensus 80 ~~~~~~~~~~~~p~vv~~HG-~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~-~----------~~~~~~ 147 (286)
.++.......+ .+||.+-- +|.+....+..+..++.. ||.|+.+|+ .+|--.+.. . .+.+..
T Consensus 29 daYv~gs~~~~-~~li~i~DvfG~~~~n~r~~Adk~A~~-Gy~v~vPD~----~~Gdp~~~~~~~~~~~~w~~~~~~~~~ 102 (242)
T KOG3043|consen 29 DAYVVGSTSSK-KVLIVIQDVFGFQFPNTREGADKVALN-GYTVLVPDF----FRGDPWSPSLQKSERPEWMKGHSPPKI 102 (242)
T ss_pred eEEEecCCCCC-eEEEEEEeeeccccHHHHHHHHHHhcC-CcEEEcchh----hcCCCCCCCCChhhhHHHHhcCCcccc
Confidence 34444332223 45555544 444444466667777644 999999999 233212221 1 122344
Q ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc-CccEEEEeCCCCcccccccccccccccccccchhhhcc
Q psy4394 148 YADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY-QVGAVILHSPLMSGMRVAFPRTKRTWFFDVFPRVIFAN 226 (286)
Q Consensus 148 ~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-~i~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (286)
..|+..+++|++.+. +..+|.++|++|||.++..+.... .+.+++..-|...
T Consensus 103 ~~~i~~v~k~lk~~g--~~kkIGv~GfCwGak~vv~~~~~~~~f~a~v~~hps~~------------------------- 155 (242)
T KOG3043|consen 103 WKDITAVVKWLKNHG--DSKKIGVVGFCWGAKVVVTLSAKDPEFDAGVSFHPSFV------------------------- 155 (242)
T ss_pred hhHHHHHHHHHHHcC--CcceeeEEEEeecceEEEEeeccchhheeeeEecCCcC-------------------------
Confidence 589999999999664 456999999999999888887777 8888887776443
Q ss_pred cccccccCCccccCCCCCCCCCCEEEEecCCCCccChhHHHHHHHHCCCC----CCceEecCC
Q psy4394 227 VKTPIMGLSTLENIDKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPRP----VEPLWVEGL 285 (286)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~----~~~~~~~ga 285 (286)
....+.++++|+|++.|+.|..+|++...++-+++++. .++.+++|-
T Consensus 156 ------------d~~D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~ 206 (242)
T KOG3043|consen 156 ------------DSADIANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGV 206 (242)
T ss_pred ------------ChhHHhcCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCc
Confidence 34566788899999999999999999999888888765 257788774
No 111
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.36 E-value=1.2e-10 Score=94.49 Aligned_cols=100 Identities=20% Similarity=0.272 Sum_probs=71.2
Q ss_pred CeEEEEecCCccccchhhHHHHhhcccc-ceeEEEeeccCcCCCCccCCCCCCChhhHHHHHHHHHHHHHHHhCCCCCcE
Q psy4394 91 RFTILFSHGNAVDIGQMSSFFTGLGSRI-NCNIFSYDYSGYDYSGYGISTGRPSEKNLYADIDAAWNTLRTRYGISPENI 169 (286)
Q Consensus 91 ~p~vv~~HG~~~~~~~~~~~~~~l~~~~-g~~vi~~d~~~~~~~G~G~s~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i 169 (286)
.|.++++||++++...|......+.... .|+++.+|+ ||||.|. .. ..........+..+.+..+.+ ++
T Consensus 21 ~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-----~g~g~s~-~~--~~~~~~~~~~~~~~~~~~~~~--~~ 90 (282)
T COG0596 21 GPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDL-----RGHGRSD-PA--GYSLSAYADDLAALLDALGLE--KV 90 (282)
T ss_pred CCeEEEeCCCCCchhhhHHHHHHhhccccceEEEEecc-----cCCCCCC-cc--cccHHHHHHHHHHHHHHhCCC--ce
Confidence 4589999999988877776433333221 189999999 9999987 11 111112234444444455544 69
Q ss_pred EEEEeecChHHHHHHHhhc--CccEEEEeCCCC
Q psy4394 170 ILYGQSIGTVPTIDLASRY--QVGAVILHSPLM 200 (286)
Q Consensus 170 ~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~ 200 (286)
.++|||+||.+++.++.++ .++++|++++..
T Consensus 91 ~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~ 123 (282)
T COG0596 91 VLVGHSMGGAVALALALRHPDRVRGLVLIGPAP 123 (282)
T ss_pred EEEEecccHHHHHHHHHhcchhhheeeEecCCC
Confidence 9999999999999999988 799999998653
No 112
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.34 E-value=7.4e-11 Score=92.51 Aligned_cols=112 Identities=18% Similarity=0.174 Sum_probs=87.4
Q ss_pred EEEEEee-cCCCCeEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCCChhhHHHHHHHHHHHH
Q psy4394 80 ACMFMKC-SPNARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSEKNLYADIDAAWNTL 158 (286)
Q Consensus 80 ~~~~~~~-~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~~~~~~~d~~~~~~~l 158 (286)
...++.| .++..|+|+|+||+.-....|...+.+++. .||.|++++. -. ...++..+.+++..++++|+
T Consensus 34 pLlI~tP~~~G~yPVilF~HG~~l~ns~Ys~lL~HIAS-HGfIVVAPQl-----~~----~~~p~~~~Ei~~aa~V~~WL 103 (307)
T PF07224_consen 34 PLLIVTPSEAGTYPVILFLHGFNLYNSFYSQLLAHIAS-HGFIVVAPQL-----YT----LFPPDGQDEIKSAASVINWL 103 (307)
T ss_pred CeEEecCCcCCCccEEEEeechhhhhHHHHHHHHHHhh-cCeEEEechh-----hc----ccCCCchHHHHHHHHHHHHH
Confidence 3444444 456789999999998877888889999985 4999999999 32 22244456678889999999
Q ss_pred HHHh--------CCCCCcEEEEEeecChHHHHHHHhhc----CccEEEEeCCCCc
Q psy4394 159 RTRY--------GISPENIILYGQSIGTVPTIDLASRY----QVGAVILHSPLMS 201 (286)
Q Consensus 159 ~~~~--------~~~~~~i~l~G~S~Gg~~a~~~a~~~----~i~~~v~~~p~~~ 201 (286)
.+.+ ..+..+++++|||.||..|..+|..+ .+.++|-+.|+..
T Consensus 104 ~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G 158 (307)
T PF07224_consen 104 PEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAG 158 (307)
T ss_pred HhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhcccccCchhheecccccCC
Confidence 8763 12345999999999999999988876 7899999998765
No 113
>KOG4627|consensus
Probab=99.34 E-value=9.7e-12 Score=93.72 Aligned_cols=181 Identities=11% Similarity=0.085 Sum_probs=122.3
Q ss_pred EEEEEeecCCCCeEEEEecCCccccchh---hHHHHhhccccceeEEEeeccCcCCCCccCCCCCCChhhHHHHHHHHHH
Q psy4394 80 ACMFMKCSPNARFTILFSHGNAVDIGQM---SSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSEKNLYADIDAAWN 156 (286)
Q Consensus 80 ~~~~~~~~~~~~p~vv~~HG~~~~~~~~---~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~~~~~~~d~~~~~~ 156 (286)
...+|.| ....++.||+||+-+..+.. ..... .+.+.||+|..++| +.+....+......+....++
T Consensus 57 ~VDIwg~-~~~~klfIfIHGGYW~~g~rk~clsiv~-~a~~~gY~vasvgY--------~l~~q~htL~qt~~~~~~gv~ 126 (270)
T KOG4627|consen 57 LVDIWGS-TNQAKLFIFIHGGYWQEGDRKMCLSIVG-PAVRRGYRVASVGY--------NLCPQVHTLEQTMTQFTHGVN 126 (270)
T ss_pred EEEEecC-CCCccEEEEEecchhhcCchhcccchhh-hhhhcCeEEEEecc--------CcCcccccHHHHHHHHHHHHH
Confidence 3344443 35678999999976544332 23333 33466999999888 455555677788889999999
Q ss_pred HHHHHhCCCCCcEEEEEeecChHHHHHHHhhc---CccEEEEeCCCCcccccccccccccccccccchhhhccccccccc
Q psy4394 157 TLRTRYGISPENIILYGQSIGTVPTIDLASRY---QVGAVILHSPLMSGMRVAFPRTKRTWFFDVFPRVIFANVKTPIMG 233 (286)
Q Consensus 157 ~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~---~i~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (286)
|+.+.+. ..+.+.+-|||.|+.+|+.+..+. +|.|+++.++.++..+..-..... .+. +. . ..
T Consensus 127 filk~~~-n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l~EL~~te~g~-dlg--Lt-------~---~~ 192 (270)
T KOG4627|consen 127 FILKYTE-NTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDLRELSNTESGN-DLG--LT-------E---RN 192 (270)
T ss_pred HHHHhcc-cceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhHHHHhCCcccc-ccC--cc-------c---ch
Confidence 9998865 445799999999999999887765 999999999988743322111110 000 00 0 00
Q ss_pred CCccc-cCCCCCCCCCCEEEEecCCCCccChhHHHHHHHHCCCCCCceEecCC
Q psy4394 234 LSTLE-NIDKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPRPVEPLWVEGL 285 (286)
Q Consensus 234 ~~~~~-~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~ga 285 (286)
....+ .+.....++.|+|++.+++|..--.++.+.+.+.+.++ ++..+++.
T Consensus 193 ae~~Scdl~~~~~v~~~ilVv~~~~espklieQnrdf~~q~~~a-~~~~f~n~ 244 (270)
T KOG4627|consen 193 AESVSCDLWEYTDVTVWILVVAAEHESPKLIEQNRDFADQLRKA-SFTLFKNY 244 (270)
T ss_pred hhhcCccHHHhcCceeeeeEeeecccCcHHHHhhhhHHHHhhhc-ceeecCCc
Confidence 00000 22345667889999999999888889999999887776 66677763
No 114
>KOG2624|consensus
Probab=99.33 E-value=2.3e-11 Score=103.57 Aligned_cols=131 Identities=18% Similarity=0.164 Sum_probs=99.5
Q ss_pred CCccccEEEeccCCCEEEEEEEeecCCCCeEEEEecCCccccchhh-----HHHHhhccccceeEEEeeccCcCCCCccC
Q psy4394 63 RSNIEGFFTRTSRGNRLACMFMKCSPNARFTILFSHGNAVDIGQMS-----SFFTGLGSRINCNIFSYDYSGYDYSGYGI 137 (286)
Q Consensus 63 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~p~vv~~HG~~~~~~~~~-----~~~~~l~~~~g~~vi~~d~~~~~~~G~G~ 137 (286)
..+.|+..++|.||..+....++...+++|+|++.||.-.++..|. .-+..+....||.|..-+. ||.-.
T Consensus 45 gy~~E~h~V~T~DgYiL~lhRIp~~~~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~-----RGn~y 119 (403)
T KOG2624|consen 45 GYPVEEHEVTTEDGYILTLHRIPRGKKKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNN-----RGNTY 119 (403)
T ss_pred CCceEEEEEEccCCeEEEEeeecCCCCCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecC-----cCccc
Confidence 3457888999999998777766655478999999999877665554 2233344456999999999 88655
Q ss_pred CCCC----C---------Chhh-HHHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc-----CccEEEEeCC
Q psy4394 138 STGR----P---------SEKN-LYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY-----QVGAVILHSP 198 (286)
Q Consensus 138 s~~~----~---------~~~~-~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-----~i~~~v~~~p 198 (286)
|... + +..+ ...|+-++++++.+..+. ++++.+|||+|+.....+++.. +|+..++++|
T Consensus 120 Sr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~--~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP 197 (403)
T KOG2624|consen 120 SRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQ--EKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAP 197 (403)
T ss_pred chhhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhccc--cceEEEEEEccchhheehhcccchhhhhhheeeeecc
Confidence 5432 1 1122 236999999999998753 4999999999999888877765 7999999999
Q ss_pred CC
Q psy4394 199 LM 200 (286)
Q Consensus 199 ~~ 200 (286)
..
T Consensus 198 ~~ 199 (403)
T KOG2624|consen 198 AA 199 (403)
T ss_pred hh
Confidence 76
No 115
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.32 E-value=4e-11 Score=92.28 Aligned_cols=164 Identities=21% Similarity=0.221 Sum_probs=88.7
Q ss_pred EEEecCCccccchhh-HHHHhhcccc--ceeEEEeeccCcCCCCccCCCCCCChhhHHHHHHHHHHHHHHHhCCCCCcEE
Q psy4394 94 ILFSHGNAVDIGQMS-SFFTGLGSRI--NCNIFSYDYSGYDYSGYGISTGRPSEKNLYADIDAAWNTLRTRYGISPENII 170 (286)
Q Consensus 94 vv~~HG~~~~~~~~~-~~~~~l~~~~--g~~vi~~d~~~~~~~G~G~s~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~ 170 (286)
|+|+||+.++..... ..+.....+. ...+..+|+ + ...++..+.+..+.++. .++.+.
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l-----~------------~~p~~a~~~l~~~i~~~--~~~~~~ 62 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDL-----P------------PFPEEAIAQLEQLIEEL--KPENVV 62 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCC-----C------------cCHHHHHHHHHHHHHhC--CCCCeE
Confidence 799999988764433 2333333232 345566666 2 11233333344444443 234699
Q ss_pred EEEeecChHHHHHHHhhcCccEEEEeCCCCcccccccccccccccccccchhhhcccccccccCCccccCCCC-CCCCCC
Q psy4394 171 LYGQSIGTVPTIDLASRYQVGAVILHSPLMSGMRVAFPRTKRTWFFDVFPRVIFANVKTPIMGLSTLENIDKV-PKVTSP 249 (286)
Q Consensus 171 l~G~S~Gg~~a~~~a~~~~i~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~P 249 (286)
|+|.|+||+.|..+|.++.+++ |+++|................... ....+ .... ..+.....++.. .....+
T Consensus 63 liGSSlGG~~A~~La~~~~~~a-vLiNPav~p~~~l~~~iG~~~~~~-~~e~~-~~~~---~~~~~l~~l~~~~~~~~~~ 136 (187)
T PF05728_consen 63 LIGSSLGGFYATYLAERYGLPA-VLINPAVRPYELLQDYIGEQTNPY-TGESY-ELTE---EHIEELKALEVPYPTNPER 136 (187)
T ss_pred EEEEChHHHHHHHHHHHhCCCE-EEEcCCCCHHHHHHHhhCccccCC-CCccc-eech---HhhhhcceEeccccCCCcc
Confidence 9999999999999999887777 888998874443322222111000 00000 0000 000011111111 122568
Q ss_pred EEEEecCCCCccChhHHHHHHHHCCCCCCceEecCCC
Q psy4394 250 VLVIHGTEDEVIDLSHGIAIYERCPRPVEPLWVEGLS 286 (286)
Q Consensus 250 vlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~ga~ 286 (286)
+++++++.|++++++.+...++ +.++ ++.+|++
T Consensus 137 ~lvll~~~DEvLd~~~a~~~~~---~~~~-~i~~ggd 169 (187)
T PF05728_consen 137 YLVLLQTGDEVLDYREAVAKYR---GCAQ-IIEEGGD 169 (187)
T ss_pred EEEEEecCCcccCHHHHHHHhc---CceE-EEEeCCC
Confidence 9999999999999976655554 3323 3445543
No 116
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.30 E-value=2.3e-11 Score=93.50 Aligned_cols=206 Identities=13% Similarity=0.074 Sum_probs=124.8
Q ss_pred EEEeccCCCEEEEEEEeecCCCCeEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCC------
Q psy4394 69 FFTRTSRGNRLACMFMKCSPNARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRP------ 142 (286)
Q Consensus 69 ~~~~~~~g~~l~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~------ 142 (286)
..+...||..+.+..++..++....++.-.+.+.....+..+....+ +.||.|+.+|| ||.|.|....
T Consensus 8 ~~l~~~DG~~l~~~~~pA~~~~~g~~~va~a~Gv~~~fYRrfA~~a~-~~Gf~Vlt~dy-----RG~g~S~p~~~~~~~~ 81 (281)
T COG4757 8 AHLPAPDGYSLPGQRFPADGKASGRLVVAGATGVGQYFYRRFAAAAA-KAGFEVLTFDY-----RGIGQSRPASLSGSQW 81 (281)
T ss_pred cccccCCCccCccccccCCCCCCCcEEecccCCcchhHhHHHHHHhh-ccCceEEEEec-----ccccCCCccccccCcc
Confidence 55678899999999998765555566666666665566666666665 56999999999 9999987542
Q ss_pred ChhhHH-HHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhcCccEEEEeCCCCccccccccc------------
Q psy4394 143 SEKNLY-ADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRYQVGAVILHSPLMSGMRVAFPR------------ 209 (286)
Q Consensus 143 ~~~~~~-~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~i~~~v~~~p~~~~~~~~~~~------------ 209 (286)
...++. .|+.++++++++.. ...+.+.+|||+||.+.-.+....+..+......... ++..+..
T Consensus 82 ~~~DwA~~D~~aal~~~~~~~--~~~P~y~vgHS~GGqa~gL~~~~~k~~a~~vfG~gag-wsg~m~~~~~l~~~~l~~l 158 (281)
T COG4757 82 RYLDWARLDFPAALAALKKAL--PGHPLYFVGHSFGGQALGLLGQHPKYAAFAVFGSGAG-WSGWMGLRERLGAVLLWNL 158 (281)
T ss_pred chhhhhhcchHHHHHHHHhhC--CCCceEEeeccccceeecccccCcccceeeEeccccc-cccchhhhhcccceeeccc
Confidence 233333 69999999999865 3558999999999976554444333333333221111 1111100
Q ss_pred --ccccccccccchhhhccccc-------c------cccCCcccc-----CCCCCCCCCCEEEEecCCCCccChhHHHHH
Q psy4394 210 --TKRTWFFDVFPRVIFANVKT-------P------IMGLSTLEN-----IDKVPKVTSPVLVIHGTEDEVIDLSHGIAI 269 (286)
Q Consensus 210 --~~~~~~~~~~~~~~~~~~~~-------~------~~~~~~~~~-----~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l 269 (286)
....++...++..+...-.+ . ...+.-.++ .+..+.+.+|+.++...+|+.+|+...+.+
T Consensus 159 v~p~lt~w~g~~p~~l~G~G~d~p~~v~RdW~RwcR~p~y~fddp~~~~~~q~yaaVrtPi~~~~~~DD~w~P~As~d~f 238 (281)
T COG4757 159 VGPPLTFWKGYMPKDLLGLGSDLPGTVMRDWARWCRHPRYYFDDPAMRNYRQVYAAVRTPITFSRALDDPWAPPASRDAF 238 (281)
T ss_pred cccchhhccccCcHhhcCCCccCcchHHHHHHHHhcCccccccChhHhHHHHHHHHhcCceeeeccCCCCcCCHHHHHHH
Confidence 00111111121111111100 0 000111111 123456789999999999999999999999
Q ss_pred HHHCCCC-CCceEec
Q psy4394 270 YERCPRP-VEPLWVE 283 (286)
Q Consensus 270 ~~~~~~~-~~~~~~~ 283 (286)
.+...+. .+...++
T Consensus 239 ~~~y~nApl~~~~~~ 253 (281)
T COG4757 239 ASFYRNAPLEMRDLP 253 (281)
T ss_pred HHhhhcCcccceecC
Confidence 9887765 3444443
No 117
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.30 E-value=6.5e-12 Score=99.46 Aligned_cols=138 Identities=23% Similarity=0.209 Sum_probs=75.1
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc-CccEEEEeCCCCcccccccccccc----cccccccchh-
Q psy4394 149 ADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY-QVGAVILHSPLMSGMRVAFPRTKR----TWFFDVFPRV- 222 (286)
Q Consensus 149 ~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-~i~~~v~~~p~~~~~~~~~~~~~~----~~~~~~~~~~- 222 (286)
+..+.+++||+++..+++++|+|+|.|.||-+|+.+|+.+ .|+++|+++|..-.+......... ..+.......
T Consensus 4 Eyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~~i~avVa~~ps~~~~~~~~~~~~~~~~lp~~~~~~~~~~ 83 (213)
T PF08840_consen 4 EYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFPQISAVVAISPSSVVFQGIGFYRDSSKPLPYLPFDISKFS 83 (213)
T ss_dssp HHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSSSEEEEEEES--SB--SSEEEETTE--EE----B-GGG-E
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCCCccEEEEeCCceeEecchhcccCCCccCCcCCcChhhce
Confidence 4578899999999988889999999999999999999999 999999998864322211100000 0000000000
Q ss_pred --hhcc--cccccccCC---ccccCCCCCCCCCCEEEEecCCCCccChhHHH-HHHHHCCC-----CCCceEecCCC
Q psy4394 223 --IFAN--VKTPIMGLS---TLENIDKVPKVTSPVLVIHGTEDEVIDLSHGI-AIYERCPR-----PVEPLWVEGLS 286 (286)
Q Consensus 223 --~~~~--~~~~~~~~~---~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~-~l~~~~~~-----~~~~~~~~ga~ 286 (286)
.... ......... ..+..-.+.++++|+|+|.|++|.+.|..... .+.++++. ..+++.+|+||
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~a~IpvE~i~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~~~~~~l~Y~~aG 160 (213)
T PF08840_consen 84 WNEPGLLRSRYAFELADDKAVEEARIPVEKIKGPILLISGEDDQIWPSSEMAEQIEERLKAAGFPHNVEHLSYPGAG 160 (213)
T ss_dssp E-TTS-EE-TT-B--TTTGGGCCCB--GGG--SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT-----EEEEETTB-
T ss_pred ecCCcceehhhhhhcccccccccccccHHHcCCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCCCcceEEEcCCCC
Confidence 0000 000000000 00111235678999999999999999987544 44444432 25678889886
No 118
>KOG2237|consensus
Probab=99.28 E-value=4.3e-11 Score=104.35 Aligned_cols=204 Identities=14% Similarity=0.089 Sum_probs=136.6
Q ss_pred CccccEEEeccCCCEEEEEEEee----cCCCCeEEEEecCCcccc--chhhHHHHhhccccceeEEEeeccCcCCCCccC
Q psy4394 64 SNIEGFFTRTSRGNRLACMFMKC----SPNARFTILFSHGNAVDI--GQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGI 137 (286)
Q Consensus 64 ~~~~~~~~~~~~g~~l~~~~~~~----~~~~~p~vv~~HG~~~~~--~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~ 137 (286)
...+.+++.+.||..++..++.- ..+++|.+|+.||+-+-. ..|..-...+.. .|+.....|. ||=|.
T Consensus 439 y~~~r~~~~SkDGt~VPM~Iv~kk~~k~dg~~P~LLygYGay~isl~p~f~~srl~lld-~G~Vla~a~V-----RGGGe 512 (712)
T KOG2237|consen 439 YVVERIEVSSKDGTKVPMFIVYKKDIKLDGSKPLLLYGYGAYGISLDPSFRASRLSLLD-RGWVLAYANV-----RGGGE 512 (712)
T ss_pred eEEEEEEEecCCCCccceEEEEechhhhcCCCceEEEEecccceeeccccccceeEEEe-cceEEEEEee-----ccCcc
Confidence 35778889999999998876643 245789999999864422 123322333443 5999999999 77665
Q ss_pred CCCC-------CChhhHHHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc--CccEEEEeCCCCcccccccc
Q psy4394 138 STGR-------PSEKNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY--QVGAVILHSPLMSGMRVAFP 208 (286)
Q Consensus 138 s~~~-------~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~~~~~~~~~ 208 (286)
-+.. ....+..+|..+.++||.++....+++..+.|.|.||.++...+-++ -+.++|+-.|+.|..+....
T Consensus 513 ~G~~WHk~G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmDvL~t~~~ 592 (712)
T KOG2237|consen 513 YGEQWHKDGRLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMDVLNTHKD 592 (712)
T ss_pred cccchhhccchhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchHhhhhhhcCcceehhhhhcc
Confidence 4322 33456679999999999999777889999999999999888888777 88999999999997665544
Q ss_pred cccccccccccchhhhcccccccccCCccccCCCCCCC--CCCEEEEecCCCCccChhHHHHHHHHCC
Q psy4394 209 RTKRTWFFDVFPRVIFANVKTPIMGLSTLENIDKVPKV--TSPVLVIHGTEDEVIDLSHGIAIYERCP 274 (286)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~Pvlii~G~~D~~v~~~~~~~l~~~~~ 274 (286)
.....|..+. ..+-..........+..+++.+.+.+- -.-+|+..+.+|+.|++.++.++.++++
T Consensus 593 tilplt~sd~-ee~g~p~~~~~~~~i~~y~pv~~i~~q~~YPS~lvtta~hD~RV~~~~~~K~vAklr 659 (712)
T KOG2237|consen 593 TILPLTTSDY-EEWGNPEDFEDLIKISPYSPVDNIKKQVQYPSMLVTTADHDDRVGPLESLKWVAKLR 659 (712)
T ss_pred Cccccchhhh-cccCChhhhhhhheecccCccCCCchhccCcceEEeeccCCCcccccchHHHHHHHH
Confidence 4333332211 101011111111223333344333321 2458899999999999988888877654
No 119
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.20 E-value=1.8e-10 Score=93.70 Aligned_cols=108 Identities=23% Similarity=0.315 Sum_probs=66.8
Q ss_pred CCCeEEEEecCCccccc--hhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCCChhhHHHHHHHHHHHHHHHhC--C
Q psy4394 89 NARFTILFSHGNAVDIG--QMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSEKNLYADIDAAWNTLRTRYG--I 164 (286)
Q Consensus 89 ~~~p~vv~~HG~~~~~~--~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~~~~~~~d~~~~~~~l~~~~~--~ 164 (286)
.+..+|||+.|.+.... .|...+....+..||.++-+.+ .+.+.|+|.++ ...-.+|+.++++|++...+ .
T Consensus 31 ~~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~L-sSSy~G~G~~S----L~~D~~eI~~~v~ylr~~~~g~~ 105 (303)
T PF08538_consen 31 SAPNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQL-SSSYSGWGTSS----LDRDVEEIAQLVEYLRSEKGGHF 105 (303)
T ss_dssp TSSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE---GGGBTTS-S------HHHHHHHHHHHHHHHHHHS----
T ss_pred CCCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEe-cCccCCcCcch----hhhHHHHHHHHHHHHHHhhcccc
Confidence 35678999999765332 2333333333456999999987 22235566443 56668999999999999842 2
Q ss_pred CCCcEEEEEeecChHHHHHHHhhc-------CccEEEEeCCCCc
Q psy4394 165 SPENIILYGQSIGTVPTIDLASRY-------QVGAVILHSPLMS 201 (286)
Q Consensus 165 ~~~~i~l~G~S~Gg~~a~~~a~~~-------~i~~~v~~~p~~~ 201 (286)
..++|+|+|||-|..-++.++... .|+++|+-+|+.|
T Consensus 106 ~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSD 149 (303)
T PF08538_consen 106 GREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSD 149 (303)
T ss_dssp --S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---
T ss_pred CCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCC
Confidence 356999999999999999988765 5999999999887
No 120
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=99.19 E-value=9.6e-10 Score=96.73 Aligned_cols=205 Identities=14% Similarity=0.074 Sum_probs=134.1
Q ss_pred CccccEEEeccCCCEEEEEEEee----cCCCCeEEEEecCCcc-ccc-hhhHHHHhhccccceeEEEeeccCcCCCCccC
Q psy4394 64 SNIEGFFTRTSRGNRLACMFMKC----SPNARFTILFSHGNAV-DIG-QMSSFFTGLGSRINCNIFSYDYSGYDYSGYGI 137 (286)
Q Consensus 64 ~~~~~~~~~~~~g~~l~~~~~~~----~~~~~p~vv~~HG~~~-~~~-~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~ 137 (286)
...+.++.+..||.++...++-- .+++.|++|+..|.=+ +.. .+....-.|..+ |+....... ||=|.
T Consensus 417 Y~s~riwa~a~dgv~VPVSLvyrkd~~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDR-GfiyAIAHV-----RGGge 490 (682)
T COG1770 417 YVSRRIWATADDGVQVPVSLVYRKDTKLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDR-GFVYAIAHV-----RGGGE 490 (682)
T ss_pred eEEEEEEEEcCCCcEeeEEEEEecccCCCCCCcEEEEEeccccccCCcCcccceeeeecC-ceEEEEEEe-----ecccc
Confidence 34567777778999998765532 3467799999998433 222 233333345533 888777788 66544
Q ss_pred CCCC-------CChhhHHHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc--CccEEEEeCCCCcccccccc
Q psy4394 138 STGR-------PSEKNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY--QVGAVILHSPLMSGMRVAFP 208 (286)
Q Consensus 138 s~~~-------~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~~~~~~~~~ 208 (286)
-+.. ....+...|..++.++|.++...++++++++|.|.||++...++-+. .++++|+..||+|....+..
T Consensus 491 lG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDvltTMlD 570 (682)
T COG1770 491 LGRAWYEDGKLLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDVLTTMLD 570 (682)
T ss_pred cChHHHHhhhhhhccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccchhhhhcC
Confidence 3321 23345568999999999999767788999999999999998888877 89999999999986655433
Q ss_pred cccccccccccchhhhcccccccccCCccccCCCCCC-CCCCEEEEecCCCCccChhHHHHHHHHCCC
Q psy4394 209 RTKRTWFFDVFPRVIFANVKTPIMGLSTLENIDKVPK-VTSPVLVIHGTEDEVIDLSHGIAIYERCPR 275 (286)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~ 275 (286)
...... ...+..+..........-+..++|.+.+.. --.|+|++.|..|+.|.+-+..++..++..
T Consensus 571 ~slPLT-~~E~~EWGNP~d~e~y~yikSYSPYdNV~a~~YP~ilv~~Gl~D~rV~YwEpAKWvAkLR~ 637 (682)
T COG1770 571 PSLPLT-VTEWDEWGNPLDPEYYDYIKSYSPYDNVEAQPYPAILVTTGLNDPRVQYWEPAKWVAKLRE 637 (682)
T ss_pred CCCCCC-ccchhhhCCcCCHHHHHHHhhcCchhccccCCCCceEEEccccCCccccchHHHHHHHHhh
Confidence 221110 011111111110111112334445554443 346899999999999999988888887754
No 121
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=99.18 E-value=1.7e-09 Score=80.10 Aligned_cols=148 Identities=16% Similarity=0.162 Sum_probs=92.0
Q ss_pred eEEEEecCCcccc-chhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCCChhhHHHHHHHHHHHHHHHhCCCCCcEE
Q psy4394 92 FTILFSHGNAVDI-GQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSEKNLYADIDAAWNTLRTRYGISPENII 170 (286)
Q Consensus 92 p~vv~~HG~~~~~-~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~ 170 (286)
+.+|++||+.++. ..|....+.-.. ++-.++. .+...+...++++.+...++.+ +++++
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we~~l~----~a~rveq---------~~w~~P~~~dWi~~l~~~v~a~-------~~~~v 62 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWESALP----NARRVEQ---------DDWEAPVLDDWIARLEKEVNAA-------EGPVV 62 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHHhhCc----cchhccc---------CCCCCCCHHHHHHHHHHHHhcc-------CCCeE
Confidence 4689999987655 445554443221 1233444 1222344444443333333322 44799
Q ss_pred EEEeecChHHHHHHHhhc--CccEEEEeCCCCcccccccccccccccccccchhhhcccccccccCCccccCCCCCCCCC
Q psy4394 171 LYGQSIGTVPTIDLASRY--QVGAVILHSPLMSGMRVAFPRTKRTWFFDVFPRVIFANVKTPIMGLSTLENIDKVPKVTS 248 (286)
Q Consensus 171 l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 248 (286)
|++||+|+.+++.++.+. .|+|+++++|+.-......+.. ...+++... ....-
T Consensus 63 lVAHSLGc~~v~h~~~~~~~~V~GalLVAppd~~~~~~~~~~-----------------------~~tf~~~p~-~~lpf 118 (181)
T COG3545 63 LVAHSLGCATVAHWAEHIQRQVAGALLVAPPDVSRPEIRPKH-----------------------LMTFDPIPR-EPLPF 118 (181)
T ss_pred EEEecccHHHHHHHHHhhhhccceEEEecCCCccccccchhh-----------------------ccccCCCcc-ccCCC
Confidence 999999999999999887 9999999999764221111000 011112222 23356
Q ss_pred CEEEEecCCCCccChhHHHHHHHHCCCCCCceEecCC
Q psy4394 249 PVLVIHGTEDEVIDLSHGIAIYERCPRPVEPLWVEGL 285 (286)
Q Consensus 249 Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~ga 285 (286)
|.+++++++|+.+++++++.+.+.+++. ++.+..+
T Consensus 119 ps~vvaSrnDp~~~~~~a~~~a~~wgs~--lv~~g~~ 153 (181)
T COG3545 119 PSVVVASRNDPYVSYEHAEDLANAWGSA--LVDVGEG 153 (181)
T ss_pred ceeEEEecCCCCCCHHHHHHHHHhccHh--heecccc
Confidence 8999999999999999999999999874 5555444
No 122
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=99.17 E-value=1.3e-10 Score=99.50 Aligned_cols=106 Identities=20% Similarity=0.193 Sum_probs=65.6
Q ss_pred CCCeEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCc-cC-----------CCC-------C--------
Q psy4394 89 NARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGY-GI-----------STG-------R-------- 141 (286)
Q Consensus 89 ~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~-G~-----------s~~-------~-------- 141 (286)
++.|+|||-||.+++...+..++..|+.+ ||.|+++|. |.. +- ... +
T Consensus 98 ~~~PvvIFSHGlgg~R~~yS~~~~eLAS~-GyVV~aieH-----rDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRTSYSAICGELASH-GYVVAAIEH-----RDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRD 171 (379)
T ss_dssp S-EEEEEEE--TT--TTTTHHHHHHHHHT-T-EEEEE--------SS-SSEEEE-SSHHHHHHT---------EEEE---
T ss_pred CCCCEEEEeCCCCcchhhHHHHHHHHHhC-CeEEEEecc-----CCCceeEEEeccCCCccccccccccccccceecccc
Confidence 56899999999999999999999999955 999999999 421 10 000 0
Q ss_pred C-Ch----------hhHHHHHHHHHHHHHHHh--------------------CCCCCcEEEEEeecChHHHHHHHhhc-C
Q psy4394 142 P-SE----------KNLYADIDAAWNTLRTRY--------------------GISPENIILYGQSIGTVPTIDLASRY-Q 189 (286)
Q Consensus 142 ~-~~----------~~~~~d~~~~~~~l~~~~--------------------~~~~~~i~l~G~S~Gg~~a~~~a~~~-~ 189 (286)
. .. ....+|+..+++.+.+.- .+|.++|+++|||+||+.++..+.+. +
T Consensus 172 ~~~~~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d~r 251 (379)
T PF03403_consen 172 FDPEEEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQDTR 251 (379)
T ss_dssp --GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH-TT
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhccC
Confidence 0 00 011256777777776411 13456899999999999999988888 9
Q ss_pred ccEEEEeCCCC
Q psy4394 190 VGAVILHSPLM 200 (286)
Q Consensus 190 i~~~v~~~p~~ 200 (286)
+++.|++.|+.
T Consensus 252 ~~~~I~LD~W~ 262 (379)
T PF03403_consen 252 FKAGILLDPWM 262 (379)
T ss_dssp --EEEEES---
T ss_pred cceEEEeCCcc
Confidence 99999988765
No 123
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.17 E-value=1.5e-10 Score=106.03 Aligned_cols=93 Identities=13% Similarity=0.133 Sum_probs=71.9
Q ss_pred CCeEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCCC--------------------------CC
Q psy4394 90 ARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGR--------------------------PS 143 (286)
Q Consensus 90 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~--------------------------~~ 143 (286)
..|+||++||.+++...|..+...+.+ .||+|+++|+ ||||.+... ..
T Consensus 448 g~P~VVllHG~~g~~~~~~~lA~~La~-~Gy~VIaiDl-----pGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn 521 (792)
T TIGR03502 448 GWPVVIYQHGITGAKENALAFAGTLAA-AGVATIAIDH-----PLHGARSFDANASGVNATNANVLAYMNLASLLVARDN 521 (792)
T ss_pred CCcEEEEeCCCCCCHHHHHHHHHHHHh-CCcEEEEeCC-----CCCCccccccccccccccccCccceeccccccccccC
Confidence 357999999999999999989888874 4999999999 999988321 12
Q ss_pred hhhHHHHHHHHHHHHH------HHh----CCCCCcEEEEEeecChHHHHHHHhhc
Q psy4394 144 EKNLYADIDAAWNTLR------TRY----GISPENIILYGQSIGTVPTIDLASRY 188 (286)
Q Consensus 144 ~~~~~~d~~~~~~~l~------~~~----~~~~~~i~l~G~S~Gg~~a~~~a~~~ 188 (286)
.+....|+..+...+. ..+ .++..+++++||||||.++..++...
T Consensus 522 ~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~a 576 (792)
T TIGR03502 522 LRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAYA 576 (792)
T ss_pred HHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHhc
Confidence 3444577777777776 221 24567999999999999999988753
No 124
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=99.16 E-value=2e-10 Score=91.09 Aligned_cols=161 Identities=16% Similarity=0.103 Sum_probs=79.3
Q ss_pred CCeEEEEecCCccccchhhHHHHhhccc---cceeEEEeeccCcCCCCccCCC-------------CC------C----C
Q psy4394 90 ARFTILFSHGNAVDIGQMSSFFTGLGSR---INCNIFSYDYSGYDYSGYGIST-------------GR------P----S 143 (286)
Q Consensus 90 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~---~g~~vi~~d~~~~~~~G~G~s~-------------~~------~----~ 143 (286)
+++-||++||++.+..-+...+..+.+. .++..+.+|-.-.-.++-|... .. . .
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~ 82 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHE 82 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGG
T ss_pred CCceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCccc
Confidence 4678999999999987766555544332 2466666665211101111110 00 0 0
Q ss_pred hhhHHHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc----------CccEEEEeCCCCccccccccccccc
Q psy4394 144 EKNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY----------QVGAVILHSPLMSGMRVAFPRTKRT 213 (286)
Q Consensus 144 ~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~----------~i~~~v~~~p~~~~~~~~~~~~~~~ 213 (286)
..++.+-+..+.+++.++.. =..|+|+|+||.+|..++... .++.+|+++++......
T Consensus 83 ~~~~~~sl~~l~~~i~~~GP----fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~-------- 150 (212)
T PF03959_consen 83 YEGLDESLDYLRDYIEENGP----FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPD-------- 150 (212)
T ss_dssp G---HHHHHHHHHHHHHH-------SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE---------
T ss_pred ccCHHHHHHHHHHHHHhcCC----eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchh--------
Confidence 12222333444444444422 347999999999998887543 46888988876641110
Q ss_pred ccccccchhhhcccccccccCCccccCCCCCCCCCCEEEEecCCCCccChhHHHHHHHHCCCCCCceEecCC
Q psy4394 214 WFFDVFPRVIFANVKTPIMGLSTLENIDKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPRPVEPLWVEGL 285 (286)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~ga 285 (286)
+. ..-.-..+++|+|-++|++|.+++.+.++.+.+...+..+++..+|+
T Consensus 151 -----~~------------------~~~~~~~i~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~~~v~~h~gG 199 (212)
T PF03959_consen 151 -----YQ------------------ELYDEPKISIPTLHVIGENDPVVPPERSEALAEMFDPDARVIEHDGG 199 (212)
T ss_dssp -----GT------------------TTT--TT---EEEEEEETT-SSS-HHHHHHHHHHHHHHEEEEEESSS
T ss_pred -----hh------------------hhhccccCCCCeEEEEeCCCCCcchHHHHHHHHhccCCcEEEEECCC
Confidence 00 11123467899999999999999999999999887662256666553
No 125
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.12 E-value=1.2e-09 Score=89.50 Aligned_cols=106 Identities=23% Similarity=0.256 Sum_probs=77.9
Q ss_pred CeEEEEecCCccccchhhHHHHhhccc--cceeEEEeeccCcCCCCccCCCCC---------CChhhHHHHHHHHHHHHH
Q psy4394 91 RFTILFSHGNAVDIGQMSSFFTGLGSR--INCNIFSYDYSGYDYSGYGISTGR---------PSEKNLYADIDAAWNTLR 159 (286)
Q Consensus 91 ~p~vv~~HG~~~~~~~~~~~~~~l~~~--~g~~vi~~d~~~~~~~G~G~s~~~---------~~~~~~~~d~~~~~~~l~ 159 (286)
+..++++.|++|-.+.|..++..+.+. ..+.|+++.+ .||-.+... .+.++.++.-.+.++.+.
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish-----~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~ 76 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISH-----AGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELI 76 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecC-----CCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHh
Confidence 578999999999999999998888765 3799999999 888655433 122333333344444444
Q ss_pred HHhCCCCCcEEEEEeecChHHHHHHHhhc-----CccEEEEeCCCCc
Q psy4394 160 TRYGISPENIILYGQSIGTVPTIDLASRY-----QVGAVILHSPLMS 201 (286)
Q Consensus 160 ~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-----~i~~~v~~~p~~~ 201 (286)
........+++++|||.|+++++.++.+. +|++++++.|...
T Consensus 77 ~~~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~ 123 (266)
T PF10230_consen 77 PQKNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIE 123 (266)
T ss_pred hhhcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccc
Confidence 43221346999999999999999999876 7889999988754
No 126
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=99.12 E-value=8.5e-10 Score=91.48 Aligned_cols=188 Identities=18% Similarity=0.178 Sum_probs=109.8
Q ss_pred CCeEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCc--cCCCCC------CCh---hhHHHHHHHHHHHH
Q psy4394 90 ARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGY--GISTGR------PSE---KNLYADIDAAWNTL 158 (286)
Q Consensus 90 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~--G~s~~~------~~~---~~~~~d~~~~~~~l 158 (286)
..|+|++-||.++....+....+.++ ..||.|..+|. +|. |..... +.. .+...|+..+++++
T Consensus 70 ~~PlvvlshG~Gs~~~~f~~~A~~lA-s~Gf~Va~~~h-----pgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L 143 (365)
T COG4188 70 LLPLVVLSHGSGSYVTGFAWLAEHLA-SYGFVVAAPDH-----PGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDAL 143 (365)
T ss_pred cCCeEEecCCCCCCccchhhhHHHHh-hCceEEEeccC-----CCcccccCChhhcCCcccchhhhhcccccHHHHHHHH
Confidence 67999999999999888888888888 55999999999 763 222211 111 23347999999999
Q ss_pred HHH---h----CCCCCcEEEEEeecChHHHHHHHhhc----------CccEEEEeCCCCcccccccccccccccccccch
Q psy4394 159 RTR---Y----GISPENIILYGQSIGTVPTIDLASRY----------QVGAVILHSPLMSGMRVAFPRTKRTWFFDVFPR 221 (286)
Q Consensus 159 ~~~---~----~~~~~~i~l~G~S~Gg~~a~~~a~~~----------~i~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~ 221 (286)
.+. . .++..+|.++|||+||+.++.++.-+ .....++..+..-..+... .-...|.. ....
T Consensus 144 ~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~~~~~~~~C~~~~~~~~~~~~~~~~~l~-q~~av~~~-~~~~ 221 (365)
T COG4188 144 LQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGAELDAEALLQHCESASRICLDPPGLNGRLLN-QCAAVWLP-RQAY 221 (365)
T ss_pred HHhhcCcccccccCccceEEEecccccHHHHHhccccccHHHHHHHhhhhhhcccCCCCcChhhhc-cccccccc-hhhh
Confidence 887 3 46788999999999999999988654 1111111111100000000 00000000 0000
Q ss_pred hhhcc-ccccccc---CCccccCCCCCCCCCCEEEEecCCCCccChh-HHHHHHHHCCCC-CCceEecCC
Q psy4394 222 VIFAN-VKTPIMG---LSTLENIDKVPKVTSPVLVIHGTEDEVIDLS-HGIAIYERCPRP-VEPLWVEGL 285 (286)
Q Consensus 222 ~~~~~-~~~~~~~---~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~-~~~~l~~~~~~~-~~~~~~~ga 285 (286)
.+... ++..+.. +...--.+.+.+++.|++++.|..|...|+. +....+..+++. +-+..++|+
T Consensus 222 ~~rDpriravvA~~p~~~~~Fg~tgl~~v~~P~~~~a~s~D~~aP~~~~~~~~f~~l~g~~k~~~~vp~a 291 (365)
T COG4188 222 DLRDPRIRAVVAINPALGMIFGTTGLVKVTDPVLLAAGSADGFAPPVTEQIRPFGYLPGALKYLRLVPGA 291 (365)
T ss_pred ccccccceeeeeccCCcccccccccceeeecceeeecccccccCCcccccccccccCCcchhheeecCCC
Confidence 00000 0000000 0000013556788999999999999987775 455556666665 445566654
No 127
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=99.07 E-value=4e-09 Score=87.23 Aligned_cols=196 Identities=13% Similarity=0.083 Sum_probs=117.8
Q ss_pred EEEEEeec---CCCCeEEEEecCCccccchhhH-H-HHhhccccceeEEEeeccCcCCCCccCCCCCCC-------h---
Q psy4394 80 ACMFMKCS---PNARFTILFSHGNAVDIGQMSS-F-FTGLGSRINCNIFSYDYSGYDYSGYGISTGRPS-------E--- 144 (286)
Q Consensus 80 ~~~~~~~~---~~~~p~vv~~HG~~~~~~~~~~-~-~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~-------~--- 144 (286)
+..++.|. .+.+|++|.+.|.|.+....+. + ...|.++ |+..+.+.. |=||...+... .
T Consensus 78 ~~~~~~P~~~~~~~rp~~IhLagTGDh~f~rR~~l~a~pLl~~-gi~s~~le~-----Pyyg~RkP~~Q~~s~l~~VsDl 151 (348)
T PF09752_consen 78 RFQLLLPKRWDSPYRPVCIHLAGTGDHGFWRRRRLMARPLLKE-GIASLILEN-----PYYGQRKPKDQRRSSLRNVSDL 151 (348)
T ss_pred EEEEEECCccccCCCceEEEecCCCccchhhhhhhhhhHHHHc-CcceEEEec-----ccccccChhHhhcccccchhHH
Confidence 34445553 3468999999998876544332 3 4667755 999999999 88887654311 1
Q ss_pred ----hhHHHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc--CccEEEEeCCCCccc-------c--ccccc
Q psy4394 145 ----KNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY--QVGAVILHSPLMSGM-------R--VAFPR 209 (286)
Q Consensus 145 ----~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~~~~-------~--~~~~~ 209 (286)
...+.+...+++|++++ |.. ++.+.|.||||.+|...|+.. .+..+-++++.+... + ..+..
T Consensus 152 ~~~g~~~i~E~~~Ll~Wl~~~-G~~--~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~vFt~Gvls~~i~W~~ 228 (348)
T PF09752_consen 152 FVMGRATILESRALLHWLERE-GYG--PLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVVFTEGVLSNSINWDA 228 (348)
T ss_pred HHHHhHHHHHHHHHHHHHHhc-CCC--ceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcchhhhhhhcCCCHHH
Confidence 23347889999999999 654 999999999999999998887 444444444322100 0 00000
Q ss_pred ccccccccccchhhhcccc-----------ccc-------ccCCccccCCCCCCCC-----CCEEEEecCCCCccChhHH
Q psy4394 210 TKRTWFFDVFPRVIFANVK-----------TPI-------MGLSTLENIDKVPKVT-----SPVLVIHGTEDEVIDLSHG 266 (286)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~-----------~~~-------~~~~~~~~~~~~~~i~-----~Pvlii~G~~D~~v~~~~~ 266 (286)
+...+....+......... ... .....++....+.+.. ..+.++.+++|..||.+..
T Consensus 229 L~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ea~~~m~~~md~~T~l~nf~~P~dp~~ii~V~A~~DaYVPr~~v 308 (348)
T PF09752_consen 229 LEKQFEDTVYEEEISDIPAQNKSLPLDSMEERRRDREALRFMRGVMDSFTHLTNFPVPVDPSAIIFVAAKNDAYVPRHGV 308 (348)
T ss_pred HHHHhcccchhhhhcccccCcccccchhhccccchHHHHHHHHHHHHhhccccccCCCCCCCcEEEEEecCceEechhhc
Confidence 0000000000000000000 000 0001111223333333 3478899999999999999
Q ss_pred HHHHHHCCCCCCceEecCC
Q psy4394 267 IAIYERCPRPVEPLWVEGL 285 (286)
Q Consensus 267 ~~l~~~~~~~~~~~~~~ga 285 (286)
..+.+.+++. ++.+++|+
T Consensus 309 ~~Lq~~WPGs-EvR~l~gG 326 (348)
T PF09752_consen 309 LSLQEIWPGS-EVRYLPGG 326 (348)
T ss_pred chHHHhCCCC-eEEEecCC
Confidence 9999999887 88888874
No 128
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.07 E-value=2.4e-09 Score=85.39 Aligned_cols=107 Identities=21% Similarity=0.235 Sum_probs=71.3
Q ss_pred CCeEEEEecCCccccchhhHHHHhhc-------cccceeEEEeeccCcCCCCccCCCCCCChhhHHHHHHHHHHHHHHHh
Q psy4394 90 ARFTILFSHGNAVDIGQMSSFFTGLG-------SRINCNIFSYDYSGYDYSGYGISTGRPSEKNLYADIDAAWNTLRTRY 162 (286)
Q Consensus 90 ~~p~vv~~HG~~~~~~~~~~~~~~l~-------~~~g~~vi~~d~~~~~~~G~G~s~~~~~~~~~~~d~~~~~~~l~~~~ 162 (286)
.+..|||+||++++...++.+..... ....++++++|+ ......-.........+.+...++++.+.+
T Consensus 3 ~g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df-----~~~~s~~~g~~l~~q~~~~~~~i~~i~~~~ 77 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDF-----NEELSAFHGRTLQRQAEFLAEAIKYILELY 77 (225)
T ss_pred CCCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEecc-----CccccccccccHHHHHHHHHHHHHHHHHhh
Confidence 34679999999998877666554442 122588899998 543221111222333455666777776665
Q ss_pred ---CCCCCcEEEEEeecChHHHHHHHhhc-----CccEEEEeCCCCc
Q psy4394 163 ---GISPENIILYGQSIGTVPTIDLASRY-----QVGAVILHSPLMS 201 (286)
Q Consensus 163 ---~~~~~~i~l~G~S~Gg~~a~~~a~~~-----~i~~~v~~~p~~~ 201 (286)
...+++++++||||||.+|-.++... .++.+|.++....
T Consensus 78 ~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~ 124 (225)
T PF07819_consen 78 KSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHR 124 (225)
T ss_pred hhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCC
Confidence 33567999999999999988877654 6888888865543
No 129
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=99.07 E-value=3.4e-09 Score=93.06 Aligned_cols=130 Identities=16% Similarity=0.064 Sum_probs=98.3
Q ss_pred cccEEEeccCCCEEEEEEEeec-CCCCeEEEEec--CCccc---cchhhHHHH---hhccccceeEEEeeccCcCCCCcc
Q psy4394 66 IEGFFTRTSRGNRLACMFMKCS-PNARFTILFSH--GNAVD---IGQMSSFFT---GLGSRINCNIFSYDYSGYDYSGYG 136 (286)
Q Consensus 66 ~~~~~~~~~~g~~l~~~~~~~~-~~~~p~vv~~H--G~~~~---~~~~~~~~~---~l~~~~g~~vi~~d~~~~~~~G~G 136 (286)
..++.+++.||.+|...+|.|. .++.|+++..+ -+... ......... .++ ..||.|+..|. ||.|
T Consensus 19 ~~~v~V~MRDGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~a-a~GYavV~qDv-----RG~~ 92 (563)
T COG2936 19 ERDVMVPMRDGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFA-AQGYAVVNQDV-----RGRG 92 (563)
T ss_pred eeeeeEEecCCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceee-cCceEEEEecc-----cccc
Confidence 3457788999999999999985 56789999888 22221 111112222 234 55999999999 9999
Q ss_pred CCCCCCChh--hHHHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc--CccEEEEeCCCCcc
Q psy4394 137 ISTGRPSEK--NLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY--QVGAVILHSPLMSG 202 (286)
Q Consensus 137 ~s~~~~~~~--~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~~~ 202 (286)
.|++..... .-.+|..+.++|+.++.. .-.+|+.+|.|++|...+.+|+.. .+++++..++..+.
T Consensus 93 ~SeG~~~~~~~~E~~Dg~D~I~Wia~QpW-sNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D~ 161 (563)
T COG2936 93 GSEGVFDPESSREAEDGYDTIEWLAKQPW-SNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVDR 161 (563)
T ss_pred cCCcccceeccccccchhHHHHHHHhCCc-cCCeeeeecccHHHHHHHHHHhcCCchheeeccccccccc
Confidence 999874432 246899999999999754 446999999999999999998887 88888888777663
No 130
>KOG2112|consensus
Probab=99.05 E-value=3e-09 Score=81.09 Aligned_cols=161 Identities=20% Similarity=0.228 Sum_probs=95.6
Q ss_pred CeEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCC---CccCC---------C-CCCChhh---HHHHHHHH
Q psy4394 91 RFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYS---GYGIS---------T-GRPSEKN---LYADIDAA 154 (286)
Q Consensus 91 ~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~---G~G~s---------~-~~~~~~~---~~~d~~~~ 154 (286)
+.+||++||.+.+...|..++..+..+ +...+.+.-.-.... |.+.. . ...+..+ ..+.+..+
T Consensus 3 ~atIi~LHglGDsg~~~~~~~~~l~l~-NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~L 81 (206)
T KOG2112|consen 3 TATIIFLHGLGDSGSGWAQFLKQLPLP-NIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANL 81 (206)
T ss_pred eEEEEEEecCCCCCccHHHHHHcCCCC-CeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHH
Confidence 468999999999888888777775433 566666532000000 00000 0 0001111 11222233
Q ss_pred HHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc--CccEEEEeCCCCcccccccccccccccccccchhhhcccccccc
Q psy4394 155 WNTLRTRYGISPENIILYGQSIGTVPTIDLASRY--QVGAVILHSPLMSGMRVAFPRTKRTWFFDVFPRVIFANVKTPIM 232 (286)
Q Consensus 155 ~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (286)
+++-.+ .+++.++|.+-|+|+||.+++..+..+ .+.+++..+++.......++..
T Consensus 82 i~~e~~-~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~~~~~~~~---------------------- 138 (206)
T KOG2112|consen 82 IDNEPA-NGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRASIGLPGW---------------------- 138 (206)
T ss_pred HHHHHH-cCCCccceeEcccCchHHHHHHHHhccccccceeeccccccccchhhccCC----------------------
Confidence 333322 378889999999999999999999877 6677777666554111111110
Q ss_pred cCCccccCCCCCCCCCCEEEEecCCCCccChhHHHHHHHHCCC---CCCceEecC
Q psy4394 233 GLSTLENIDKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPR---PVEPLWVEG 284 (286)
Q Consensus 233 ~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~---~~~~~~~~g 284 (286)
.... + ..|++..||+.|++||..-.++..+.+.. .+++..++|
T Consensus 139 -------~~~~-~-~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~~~f~~y~g 184 (206)
T KOG2112|consen 139 -------LPGV-N-YTPILLCHGTADPLVPFRFGEKSAQFLKSLGVRVTFKPYPG 184 (206)
T ss_pred -------cccc-C-cchhheecccCCceeehHHHHHHHHHHHHcCCceeeeecCC
Confidence 0111 1 78999999999999999877666665433 256666665
No 131
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.04 E-value=1.9e-09 Score=89.18 Aligned_cols=116 Identities=19% Similarity=0.154 Sum_probs=76.8
Q ss_pred CCEEEEEEEee-cCCCCeEEEEecCCccccc-----------hhhHHHHhh--ccccceeEEEeeccCcCCCCcc-CCCC
Q psy4394 76 GNRLACMFMKC-SPNARFTILFSHGNAVDIG-----------QMSSFFTGL--GSRINCNIFSYDYSGYDYSGYG-ISTG 140 (286)
Q Consensus 76 g~~l~~~~~~~-~~~~~p~vv~~HG~~~~~~-----------~~~~~~~~l--~~~~g~~vi~~d~~~~~~~G~G-~s~~ 140 (286)
+..+.+..+.. .....++|+++|+..++.. +|..++-.= ..-..|-||++|. -|.. .|.+
T Consensus 35 ~~~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~Nv-----lG~c~GStg 109 (368)
T COG2021 35 DARVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNV-----LGGCKGSTG 109 (368)
T ss_pred CcEEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecC-----CCCCCCCCC
Confidence 34555555533 3345679999999887542 233332211 1223699999999 6654 3332
Q ss_pred CC----C--------hhhHHHHHHHHHHHHHHHhCCCCCcEE-EEEeecChHHHHHHHhhc--CccEEEEeCC
Q psy4394 141 RP----S--------EKNLYADIDAAWNTLRTRYGISPENII-LYGQSIGTVPTIDLASRY--QVGAVILHSP 198 (286)
Q Consensus 141 ~~----~--------~~~~~~d~~~~~~~l~~~~~~~~~~i~-l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p 198 (286)
+. . ..-.+.|...+-+.+.+.+||. ++. ++|.||||+.|+.++..+ +++.+|.++.
T Consensus 110 P~s~~p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~--~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~ 180 (368)
T COG2021 110 PSSINPGGKPYGSDFPVITIRDMVRAQRLLLDALGIK--KLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIAT 180 (368)
T ss_pred CCCcCCCCCccccCCCcccHHHHHHHHHHHHHhcCcc--eEeeeeccChHHHHHHHHHHhChHHHhhhheecc
Confidence 21 1 1123478888888899999987 665 999999999999999988 7777766654
No 132
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=99.01 E-value=1.9e-09 Score=86.99 Aligned_cols=181 Identities=17% Similarity=0.219 Sum_probs=99.8
Q ss_pred CCeEEEEecCCccccchhhHHHHhhc-cc-cceeEEEeeccCcCCCCc----cCCC---CCC------------ChhhHH
Q psy4394 90 ARFTILFSHGNAVDIGQMSSFFTGLG-SR-INCNIFSYDYSGYDYSGY----GIST---GRP------------SEKNLY 148 (286)
Q Consensus 90 ~~p~vv~~HG~~~~~~~~~~~~~~l~-~~-~g~~vi~~d~~~~~~~G~----G~s~---~~~------------~~~~~~ 148 (286)
.....||+||++++...+..++..+. +. ..-.++.++... -|. |.-. ..| +.....
T Consensus 10 ~~tPTifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~---~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa 86 (255)
T PF06028_consen 10 STTPTIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSK---NGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQA 86 (255)
T ss_dssp S-EEEEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEET---TSEEEEES---TT-SS-EEEEEESSTT-CHHHHHH
T ss_pred CCCcEEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECC---CCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHH
Confidence 34568999999999888888888775 22 123333333300 332 2111 111 122334
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc-------CccEEEEeCCCCcccccccccccc-cccccccc
Q psy4394 149 ADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY-------QVGAVILHSPLMSGMRVAFPRTKR-TWFFDVFP 220 (286)
Q Consensus 149 ~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-------~i~~~v~~~p~~~~~~~~~~~~~~-~~~~~~~~ 220 (286)
.-+..++.+|.++++++ ++-++||||||..++.++..+ .+..+|.+++.+++.......... ...... +
T Consensus 87 ~wl~~vl~~L~~~Y~~~--~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~~~~~~~~~~g-p 163 (255)
T PF06028_consen 87 KWLKKVLKYLKKKYHFK--KFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDDQNQNDLNKNG-P 163 (255)
T ss_dssp HHHHHHHHHHHHCC--S--EEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-TTTT-CSTT--B
T ss_pred HHHHHHHHHHHHhcCCC--EEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccccchhhhhcccC-C
Confidence 67788999999999877 999999999999999988775 678999997766643221111000 000000 0
Q ss_pred hhhhcccccccccCCccc-c-CCCCCCCCCCEEEEecC------CCCccChhHHHHHHHHCCCC---CCceEecC
Q psy4394 221 RVIFANVKTPIMGLSTLE-N-IDKVPKVTSPVLVIHGT------EDEVIDLSHGIAIYERCPRP---VEPLWVEG 284 (286)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~-~-~~~~~~i~~Pvlii~G~------~D~~v~~~~~~~l~~~~~~~---~~~~~~~g 284 (286)
. ... ..+..+- . ...+.+ ++.+|-|.|. .|..||...++.+..-+++. .+..++.|
T Consensus 164 ~-----~~~--~~y~~l~~~~~~~~p~-~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~~~~Y~e~~v~G 230 (255)
T PF06028_consen 164 K-----SMT--PMYQDLLKNRRKNFPK-NIQVLNIYGDLEDGSNSDGIVPNASSLSLRYLLKNRAKSYQEKTVTG 230 (255)
T ss_dssp S-----S----HHHHHHHHTHGGGSTT-T-EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCTTTSSEEEEEEEES
T ss_pred c-----ccC--HHHHHHHHHHHhhCCC-CeEEEEEecccCCCCCCCeEEeHHHHHHHHHHhhcccCceEEEEEEC
Confidence 0 000 0000000 1 122222 5789999998 89999999998888887663 34445544
No 133
>KOG2551|consensus
Probab=98.98 E-value=1.3e-08 Score=78.15 Aligned_cols=101 Identities=15% Similarity=0.093 Sum_probs=75.7
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc----------CccEEEEeCCCCcccccccccccccccccc
Q psy4394 149 ADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY----------QVGAVILHSPLMSGMRVAFPRTKRTWFFDV 218 (286)
Q Consensus 149 ~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~----------~i~~~v~~~p~~~~~~~~~~~~~~~~~~~~ 218 (286)
+-+..+.+|++++...| .|+|+|+|+.++..++... .++-+|++|++...- ..
T Consensus 90 esl~yl~~~i~enGPFD----GllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~-------------~~ 152 (230)
T KOG2551|consen 90 ESLEYLEDYIKENGPFD----GLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFPS-------------KK 152 (230)
T ss_pred HHHHHHHHHHHHhCCCc----cccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCCc-------------ch
Confidence 44677778888886566 6999999999999888721 668888888876410 00
Q ss_pred cchhhhcccccccccCCccccCCCCCCCCCCEEEEecCCCCccChhHHHHHHHHCCCCCCceEecCC
Q psy4394 219 FPRVIFANVKTPIMGLSTLENIDKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPRPVEPLWVEGL 285 (286)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~ga 285 (286)
+ +.....+.+++|.|-|.|+.|.++|.+.++.|++.+.++ .++.-+|+
T Consensus 153 ~------------------~~~~~~~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a-~vl~Hpgg 200 (230)
T KOG2551|consen 153 L------------------DESAYKRPLSTPSLHIFGETDTIVPSERSEQLAESFKDA-TVLEHPGG 200 (230)
T ss_pred h------------------hhhhhccCCCCCeeEEecccceeecchHHHHHHHhcCCC-eEEecCCC
Confidence 0 022334578999999999999999999999999999988 55555553
No 134
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.96 E-value=2.7e-09 Score=95.70 Aligned_cols=120 Identities=18% Similarity=0.174 Sum_probs=79.4
Q ss_pred EEEEEEeec----CCCCeEEEEecCCccccchhhH-HHHhhccccc-eeEEEeecc-CcCCCCccCCCCC-CChhhHHHH
Q psy4394 79 LACMFMKCS----PNARFTILFSHGNAVDIGQMSS-FFTGLGSRIN-CNIFSYDYS-GYDYSGYGISTGR-PSEKNLYAD 150 (286)
Q Consensus 79 l~~~~~~~~----~~~~p~vv~~HG~~~~~~~~~~-~~~~l~~~~g-~~vi~~d~~-~~~~~G~G~s~~~-~~~~~~~~d 150 (286)
+...++.|. .++.|++|++||++...+.... ....++...+ +.|+.++|| |. -|+...... ..-..-..|
T Consensus 79 l~l~i~~p~~~~~~~~~pv~v~ihGG~~~~g~~~~~~~~~~~~~~~~~~vv~~~yRlg~--~g~~~~~~~~~~~n~g~~D 156 (493)
T cd00312 79 LYLNVYTPKNTKPGNSLPVMVWIHGGGFMFGSGSLYPGDGLAREGDNVIVVSINYRLGV--LGFLSTGDIELPGNYGLKD 156 (493)
T ss_pred CeEEEEeCCCCCCCCCCCEEEEEcCCccccCCCCCCChHHHHhcCCCEEEEEecccccc--cccccCCCCCCCcchhHHH
Confidence 344445553 3467999999998754322111 2233443434 999999994 32 244333221 112233689
Q ss_pred HHHHHHHHHHH---hCCCCCcEEEEEeecChHHHHHHHhhc----CccEEEEeCCCC
Q psy4394 151 IDAAWNTLRTR---YGISPENIILYGQSIGTVPTIDLASRY----QVGAVILHSPLM 200 (286)
Q Consensus 151 ~~~~~~~l~~~---~~~~~~~i~l~G~S~Gg~~a~~~a~~~----~i~~~v~~~p~~ 200 (286)
+..+++|++++ ++.|+++|.|+|+|.||.++..++... .++++|+.|+..
T Consensus 157 ~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~ 213 (493)
T cd00312 157 QRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSA 213 (493)
T ss_pred HHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCc
Confidence 99999999886 477999999999999999988877653 678888887644
No 135
>KOG3847|consensus
Probab=98.95 E-value=1.1e-08 Score=82.24 Aligned_cols=107 Identities=18% Similarity=0.189 Sum_probs=75.5
Q ss_pred CCCCeEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccCCC---------CCC-------------Ch-
Q psy4394 88 PNARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGIST---------GRP-------------SE- 144 (286)
Q Consensus 88 ~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~---------~~~-------------~~- 144 (286)
+.+.|+|||-||.++++..|..+...++. .||.|.+++. |-+.... ..+ ..
T Consensus 115 ~~k~PvvvFSHGLggsRt~YSa~c~~LAS-hG~VVaavEH-----RD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ek 188 (399)
T KOG3847|consen 115 NDKYPVVVFSHGLGGSRTLYSAYCTSLAS-HGFVVAAVEH-----RDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEK 188 (399)
T ss_pred CCCccEEEEecccccchhhHHHHhhhHhh-CceEEEEeec-----ccCcceeEEEecccccCCcccccceEeeeeccCce
Confidence 45679999999999999999999999985 4999999999 6543211 000 00
Q ss_pred ---------hhHHHHHHHHHHHHHHH---------------------hCCCCCcEEEEEeecChHHHHHHHhhc-CccEE
Q psy4394 145 ---------KNLYADIDAAWNTLRTR---------------------YGISPENIILYGQSIGTVPTIDLASRY-QVGAV 193 (286)
Q Consensus 145 ---------~~~~~d~~~~~~~l~~~---------------------~~~~~~~i~l~G~S~Gg~~a~~~a~~~-~i~~~ 193 (286)
....+++..+++-+++- .+++..++.++|||+||+.++...+.+ ++++.
T Consensus 189 ef~irNeqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t~Frca 268 (399)
T KOG3847|consen 189 EFHIRNEQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHTDFRCA 268 (399)
T ss_pred eEEeeCHHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccccceeee
Confidence 01123444455444332 134556899999999999999888877 99988
Q ss_pred EEeCCCC
Q psy4394 194 ILHSPLM 200 (286)
Q Consensus 194 v~~~p~~ 200 (286)
|+...+.
T Consensus 269 I~lD~WM 275 (399)
T KOG3847|consen 269 IALDAWM 275 (399)
T ss_pred eeeeeee
Confidence 8866543
No 136
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=98.92 E-value=1.5e-08 Score=85.20 Aligned_cols=103 Identities=13% Similarity=0.137 Sum_probs=75.6
Q ss_pred CeEEEEecCCcccc-----chhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCCChhhHH-HHHHHHHHHHHHHhCC
Q psy4394 91 RFTILFSHGNAVDI-----GQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSEKNLY-ADIDAAWNTLRTRYGI 164 (286)
Q Consensus 91 ~p~vv~~HG~~~~~-----~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~~~~~~-~d~~~~~~~l~~~~~~ 164 (286)
++.++++|-.-... ..-..+...+. +.|..|+.+++ ++-..+......++.. +++..+++.+++..+.
T Consensus 107 ~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~-~~g~~vfvIsw-----~nPd~~~~~~~~edYi~e~l~~aid~v~~itg~ 180 (445)
T COG3243 107 KRPLLIVPPWINKFYILDLSPEKSLVRWLL-EQGLDVFVISW-----RNPDASLAAKNLEDYILEGLSEAIDTVKDITGQ 180 (445)
T ss_pred CCceEeeccccCceeEEeCCCCccHHHHHH-HcCCceEEEec-----cCchHhhhhccHHHHHHHHHHHHHHHHHHHhCc
Confidence 45688888754322 22335556565 45999999999 6655555566666666 8889999999998775
Q ss_pred CCCcEEEEEeecChHHHHHHHhhc---CccEEEEeCCCCc
Q psy4394 165 SPENIILYGQSIGTVPTIDLASRY---QVGAVILHSPLMS 201 (286)
Q Consensus 165 ~~~~i~l~G~S~Gg~~a~~~a~~~---~i~~~v~~~p~~~ 201 (286)
+ +|.++|+|.||.++..+++.. +|+.+.++....|
T Consensus 181 ~--~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~D 218 (445)
T COG3243 181 K--DINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVD 218 (445)
T ss_pred c--ccceeeEecchHHHHHHHHhhhhcccccceeeecchh
Confidence 5 999999999999888877766 4888877755444
No 137
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=98.89 E-value=1.9e-08 Score=80.82 Aligned_cols=98 Identities=15% Similarity=0.227 Sum_probs=72.1
Q ss_pred eEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCCChhhHHHHHHHHHHHHHHHhCCCCCcEEE
Q psy4394 92 FTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSEKNLYADIDAAWNTLRTRYGISPENIIL 171 (286)
Q Consensus 92 p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l 171 (286)
++|+++|+++++...|..+.+.+... .+.|+.+++ +|.+.. .+...+..+-+...++.++.... ..++.|
T Consensus 1 ~~lf~~p~~gG~~~~y~~la~~l~~~-~~~v~~i~~-----~~~~~~--~~~~~si~~la~~y~~~I~~~~~--~gp~~L 70 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRPLARALPDD-VIGVYGIEY-----PGRGDD--EPPPDSIEELASRYAEAIRARQP--EGPYVL 70 (229)
T ss_dssp -EEEEESSTTCSGGGGHHHHHHHTTT-EEEEEEECS-----TTSCTT--SHEESSHHHHHHHHHHHHHHHTS--SSSEEE
T ss_pred CeEEEEcCCccCHHHHHHHHHhCCCC-eEEEEEEec-----CCCCCC--CCCCCCHHHHHHHHHHHhhhhCC--CCCeee
Confidence 36999999999999999999988754 589999999 888722 22222333334445556655532 239999
Q ss_pred EEeecChHHHHHHHhhc-----CccEEEEeCCC
Q psy4394 172 YGQSIGTVPTIDLASRY-----QVGAVILHSPL 199 (286)
Q Consensus 172 ~G~S~Gg~~a~~~a~~~-----~i~~~v~~~p~ 199 (286)
+|||+||.+|..+|.+- .+..++++.+.
T Consensus 71 ~G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~ 103 (229)
T PF00975_consen 71 AGWSFGGILAFEMARQLEEAGEEVSRLILIDSP 103 (229)
T ss_dssp EEETHHHHHHHHHHHHHHHTT-SESEEEEESCS
T ss_pred hccCccHHHHHHHHHHHHHhhhccCceEEecCC
Confidence 99999999999999865 68888888743
No 138
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.88 E-value=7.3e-09 Score=87.15 Aligned_cols=107 Identities=18% Similarity=0.217 Sum_probs=66.3
Q ss_pred CCCeEEEEecCCcccc--chhh-HHHHhhccc--cceeEEEeeccCcCCCCccCCCCC----CChhhHHHHHHHHHHHHH
Q psy4394 89 NARFTILFSHGNAVDI--GQMS-SFFTGLGSR--INCNIFSYDYSGYDYSGYGISTGR----PSEKNLYADIDAAWNTLR 159 (286)
Q Consensus 89 ~~~p~vv~~HG~~~~~--~~~~-~~~~~l~~~--~g~~vi~~d~~~~~~~G~G~s~~~----~~~~~~~~d~~~~~~~l~ 159 (286)
.++|++|++||+.++. ..|. .....+..+ .+++|+++|+ ...-. ... ......-+.+..++++|.
T Consensus 69 ~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDW-----s~~a~-~~Y~~a~~n~~~vg~~la~~l~~L~ 142 (331)
T PF00151_consen 69 PSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDW-----SRGAS-NNYPQAVANTRLVGRQLAKFLSFLI 142 (331)
T ss_dssp TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE------HHHHS-S-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcc-----hhhcc-ccccchhhhHHHHHHHHHHHHHHHH
Confidence 5689999999998776 3344 444545555 5899999999 42211 111 011222356677788888
Q ss_pred HHhCCCCCcEEEEEeecChHHHHHHHhhc----CccEEEEeCCCCc
Q psy4394 160 TRYGISPENIILYGQSIGTVPTIDLASRY----QVGAVILHSPLMS 201 (286)
Q Consensus 160 ~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~----~i~~~v~~~p~~~ 201 (286)
+..+++.++++|+|||+||.+|-.++... ++..+..+.|..-
T Consensus 143 ~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP 188 (331)
T PF00151_consen 143 NNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGP 188 (331)
T ss_dssp HHH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-T
T ss_pred hhcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccc
Confidence 77788999999999999999999888765 5777888777543
No 139
>PRK04940 hypothetical protein; Provisional
Probab=98.87 E-value=7.2e-08 Score=72.92 Aligned_cols=100 Identities=16% Similarity=0.181 Sum_probs=61.9
Q ss_pred CcEEEEEeecChHHHHHHHhhcCccEEEEeCCCCcccccccccccccccccccchhhhcccccccccCCccccCCCCC-C
Q psy4394 167 ENIILYGQSIGTVPTIDLASRYQVGAVILHSPLMSGMRVAFPRTKRTWFFDVFPRVIFANVKTPIMGLSTLENIDKVP-K 245 (286)
Q Consensus 167 ~~i~l~G~S~Gg~~a~~~a~~~~i~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 245 (286)
+++.|+|.|+||+.|..++.++.+++ |+++|.+...+..........-...+.. ..++.++ +
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g~~a-VLiNPAv~P~~~L~~~ig~~~~y~~~~~----------------~h~~eL~~~ 122 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCGIRQ-VIFNPNLFPEENMEGKIDRPEEYADIAT----------------KCVTNFREK 122 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHCCCE-EEECCCCChHHHHHHHhCCCcchhhhhH----------------HHHHHhhhc
Confidence 47999999999999999999998765 5678887744322221111000000000 0111121 1
Q ss_pred CCCCEEEEecCCCCccChhHHHHHHHHCCCCCCceEecCCC
Q psy4394 246 VTSPVLVIHGTEDEVIDLSHGIAIYERCPRPVEPLWVEGLS 286 (286)
Q Consensus 246 i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~ga~ 286 (286)
..-..+++..+.|++.++.++.+.++.. .++.+.+|++
T Consensus 123 ~p~r~~vllq~gDEvLDyr~a~~~y~~~---y~~~v~~GGd 160 (180)
T PRK04940 123 NRDRCLVILSRNDEVLDSQRTAEELHPY---YEIVWDEEQT 160 (180)
T ss_pred CcccEEEEEeCCCcccCHHHHHHHhccC---ceEEEECCCC
Confidence 1234699999999999999888777544 1356777764
No 140
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.84 E-value=4.2e-08 Score=81.43 Aligned_cols=85 Identities=19% Similarity=0.206 Sum_probs=52.9
Q ss_pred HHHhhccccceeEEEeeccCcCCCCccCCCCCCChhhH---HHHHHHHHHHHHHHhCCC-CCcEEEEEeecChHHHHHHH
Q psy4394 110 FFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSEKNL---YADIDAAWNTLRTRYGIS-PENIILYGQSIGTVPTIDLA 185 (286)
Q Consensus 110 ~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~~~~~---~~d~~~~~~~l~~~~~~~-~~~i~l~G~S~Gg~~a~~~a 185 (286)
++..+. ..||.|+++|| .|.|. ....-... .-|...+.+.+....++. ..+++++|+|.||..++..+
T Consensus 18 ~l~~~L-~~GyaVv~pDY-----~Glg~--~y~~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA 89 (290)
T PF03583_consen 18 FLAAWL-ARGYAVVAPDY-----EGLGT--PYLNGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAA 89 (290)
T ss_pred HHHHHH-HCCCEEEecCC-----CCCCC--cccCcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHH
Confidence 444444 44999999999 88876 11111111 223333333333323332 35899999999998887766
Q ss_pred hhc-------C--ccEEEEeCCCCcc
Q psy4394 186 SRY-------Q--VGAVILHSPLMSG 202 (286)
Q Consensus 186 ~~~-------~--i~~~v~~~p~~~~ 202 (286)
... . +.+.++.+|..+.
T Consensus 90 ~l~~~YApeL~~~l~Gaa~gg~~~dl 115 (290)
T PF03583_consen 90 ELAPSYAPELNRDLVGAAAGGPPADL 115 (290)
T ss_pred HHhHHhCcccccceeEEeccCCccCH
Confidence 432 5 8888888887663
No 141
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.84 E-value=2e-07 Score=80.97 Aligned_cols=191 Identities=15% Similarity=0.183 Sum_probs=107.1
Q ss_pred ccEEEecc-CCCEEEEEEEeec---CCCCeEEEEecCCcccc-chhhHHHHhhccccc----eeEEEeeccCcCCCCc-c
Q psy4394 67 EGFFTRTS-RGNRLACMFMKCS---PNARFTILFSHGNAVDI-GQMSSFFTGLGSRIN----CNIFSYDYSGYDYSGY-G 136 (286)
Q Consensus 67 ~~~~~~~~-~g~~l~~~~~~~~---~~~~p~vv~~HG~~~~~-~~~~~~~~~l~~~~g----~~vi~~d~~~~~~~G~-G 136 (286)
+...+.+. -|.+..+++|.|. +++.|+|+++||..... ......+..+..+ | ..++.+|. .+. .
T Consensus 181 ~~~~~~S~~Lg~~r~v~VY~P~~y~~~~~PvlyllDG~~w~~~~~~~~~ld~li~~-g~i~P~ivV~id~-----~~~~~ 254 (411)
T PRK10439 181 KEIIWKSERLGNSRRVWIYTTGDAAPEERPLAILLDGQFWAESMPVWPALDSLTHR-GQLPPAVYLLIDA-----IDTTH 254 (411)
T ss_pred EEEEEEccccCCceEEEEEECCCCCCCCCCEEEEEECHHhhhcCCHHHHHHHHHHc-CCCCceEEEEECC-----CCccc
Confidence 34444333 4666777777763 24679999999965422 1233344444432 3 34567765 221 1
Q ss_pred CCCCCCChhhHHHHH-HHHHHHHHHHhCC--CCCcEEEEEeecChHHHHHHHhhc--CccEEEEeCCCCccccccccccc
Q psy4394 137 ISTGRPSEKNLYADI-DAAWNTLRTRYGI--SPENIILYGQSIGTVPTIDLASRY--QVGAVILHSPLMSGMRVAFPRTK 211 (286)
Q Consensus 137 ~s~~~~~~~~~~~d~-~~~~~~l~~~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~~~~~~~~~~~~ 211 (286)
++........+.+.+ .+++-++.+++.+ ++++.+|.|+||||..|+.++.++ .|.++++.||.+-. +...
T Consensus 255 R~~el~~~~~f~~~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ww-----~~~~ 329 (411)
T PRK10439 255 RSQELPCNADFWLAVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSFWW-----PHRG 329 (411)
T ss_pred ccccCCchHHHHHHHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccceec-----CCcc
Confidence 111112222333333 5677788887765 567899999999999999999998 89999999985410 0000
Q ss_pred ccccccccchhhhcccccccccCCccccCCCCCCCCCCEEEEecCCCCccChhHHHHHHHHCCCC---CCceEecCC
Q psy4394 212 RTWFFDVFPRVIFANVKTPIMGLSTLENIDKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPRP---VEPLWVEGL 285 (286)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~---~~~~~~~ga 285 (286)
......+.... ...........+++-+|+.|..+ .+..+++.+.+... .++.+++|+
T Consensus 330 -----~~~~~~l~~~l-----------~~~~~~~~~lr~~i~~G~~E~~~-~~~~~~l~~~L~~~G~~~~~~~~~GG 389 (411)
T PRK10439 330 -----GQQEGVLLEQL-----------KAGEVSARGLRIVLEAGRREPMI-MRANQALYAQLHPAGHSVFWRQVDGG 389 (411)
T ss_pred -----CCchhHHHHHH-----------HhcccCCCCceEEEeCCCCCchH-HHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 00000000000 00011122346888899988654 45667777766543 455666653
No 142
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.84 E-value=5.1e-08 Score=82.02 Aligned_cols=115 Identities=22% Similarity=0.265 Sum_probs=77.9
Q ss_pred EEEEEe-ec---CCCCeEEEEecCCccccchhhHH------HHhhccccceeEEEeeccCcCCCCccCCCCCCChhhHHH
Q psy4394 80 ACMFMK-CS---PNARFTILFSHGNAVDIGQMSSF------FTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSEKNLYA 149 (286)
Q Consensus 80 ~~~~~~-~~---~~~~p~vv~~HG~~~~~~~~~~~------~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~~~~~~~ 149 (286)
..|+.+ |. ++..|+|||+||+|--......+ +..+.. ...+++.|| .-..........+....
T Consensus 107 s~Wlvk~P~~~~pk~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~--~~SILvLDY-----sLt~~~~~~~~yPtQL~ 179 (374)
T PF10340_consen 107 SYWLVKAPNRFKPKSDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP--EVSILVLDY-----SLTSSDEHGHKYPTQLR 179 (374)
T ss_pred eEEEEeCCcccCCCCCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC--CCeEEEEec-----cccccccCCCcCchHHH
Confidence 356665 43 34569999999998644322211 222332 458999999 43321112233455567
Q ss_pred HHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc-------CccEEEEeCCCCccc
Q psy4394 150 DIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY-------QVGAVILHSPLMSGM 203 (286)
Q Consensus 150 d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-------~i~~~v~~~p~~~~~ 203 (286)
++.+..+++.+..+- ++|.|+|-|.||.+++.+.... .-+++|++||+.+..
T Consensus 180 qlv~~Y~~Lv~~~G~--~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 180 QLVATYDYLVESEGN--KNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred HHHHHHHHHHhccCC--CeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 889999999966553 5999999999999998876543 468999999998754
No 143
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=98.83 E-value=1.8e-08 Score=86.52 Aligned_cols=124 Identities=19% Similarity=0.198 Sum_probs=80.2
Q ss_pred ccCCCEEEEEEEeec--CCCCeEEEEecCCcccc---chhhHHHHhhccccceeEEEeecc-CcCCCCc------cCCCC
Q psy4394 73 TSRGNRLACMFMKCS--PNARFTILFSHGNAVDI---GQMSSFFTGLGSRINCNIFSYDYS-GYDYSGY------GISTG 140 (286)
Q Consensus 73 ~~~g~~l~~~~~~~~--~~~~p~vv~~HG~~~~~---~~~~~~~~~l~~~~g~~vi~~d~~-~~~~~G~------G~s~~ 140 (286)
+.|...|.. +.|+ .++.|++|++||++... .....--..|+++-++.|++++|| |. -|+ +....
T Consensus 76 sEDCL~LNI--waP~~~a~~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~--lGfL~~~~~~~~~~ 151 (491)
T COG2272 76 SEDCLYLNI--WAPEVPAEKLPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRLGA--LGFLDLSSLDTEDA 151 (491)
T ss_pred cccceeEEe--eccCCCCCCCcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCccccc--ceeeehhhcccccc
Confidence 445544443 4443 34569999999987443 222233455665544999999994 11 122 11111
Q ss_pred CCChhhHHHHHHHHHHHHHHH---hCCCCCcEEEEEeecChHHHHHHHhhc----CccEEEEeCCCCc
Q psy4394 141 RPSEKNLYADIDAAWNTLRTR---YGISPENIILYGQSIGTVPTIDLASRY----QVGAVILHSPLMS 201 (286)
Q Consensus 141 ~~~~~~~~~d~~~~~~~l~~~---~~~~~~~i~l~G~S~Gg~~a~~~a~~~----~i~~~v~~~p~~~ 201 (286)
..+. --..|+..+++|++++ +|-|+++|.|+|+|.||+.++.+...- -++.+|+.||...
T Consensus 152 ~~~n-~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 152 FASN-LGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred cccc-ccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCCC
Confidence 1111 2358999999999986 577999999999999999887776654 5667777776553
No 144
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.79 E-value=8.4e-08 Score=72.78 Aligned_cols=143 Identities=20% Similarity=0.239 Sum_probs=92.9
Q ss_pred eEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCCChhhHHHHHHHHHHHHHHHhCCCCCcEEE
Q psy4394 92 FTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSEKNLYADIDAAWNTLRTRYGISPENIIL 171 (286)
Q Consensus 92 p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l 171 (286)
..+|++-|-++....-......|+ +.|+.|+.+|- +-|=.+ +.+.++...|+.+++++..++-+. ++++|
T Consensus 3 t~~v~~SGDgGw~~~d~~~a~~l~-~~G~~VvGvds-----l~Yfw~--~rtP~~~a~Dl~~~i~~y~~~w~~--~~vvL 72 (192)
T PF06057_consen 3 TLAVFFSGDGGWRDLDKQIAEALA-KQGVPVVGVDS-----LRYFWS--ERTPEQTAADLARIIRHYRARWGR--KRVVL 72 (192)
T ss_pred EEEEEEeCCCCchhhhHHHHHHHH-HCCCeEEEech-----HHHHhh--hCCHHHHHHHHHHHHHHHHHHhCC--ceEEE
Confidence 357788886665544455666676 45999999998 655443 345567789999999999888664 49999
Q ss_pred EEeecChHHHHHHHhhc------CccEEEEeCCCCcccccccccccccccccccchhhhcccccccccCCccccCCCCCC
Q psy4394 172 YGQSIGTVPTIDLASRY------QVGAVILHSPLMSGMRVAFPRTKRTWFFDVFPRVIFANVKTPIMGLSTLENIDKVPK 245 (286)
Q Consensus 172 ~G~S~Gg~~a~~~a~~~------~i~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (286)
+|+|+|+-+.-.+..+. +|+.+++++|.... .+......|+...-. -..++....+++
T Consensus 73 iGYSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~~---dFeihv~~wlg~~~~-------------~~~~~~~pei~~ 136 (192)
T PF06057_consen 73 IGYSFGADVLPFIYNRLPAALRARVAQVVLLSPSTTA---DFEIHVSGWLGMGGD-------------DAAYPVIPEIAK 136 (192)
T ss_pred EeecCCchhHHHHHhhCCHHHHhheeEEEEeccCCcc---eEEEEhhhhcCCCCC-------------cccCCchHHHHh
Confidence 99999997665555433 89999999986541 111111122110000 000113444555
Q ss_pred CC-CCEEEEecCCCCc
Q psy4394 246 VT-SPVLVIHGTEDEV 260 (286)
Q Consensus 246 i~-~Pvlii~G~~D~~ 260 (286)
+. .|+++|+|++|.-
T Consensus 137 l~~~~v~CiyG~~E~d 152 (192)
T PF06057_consen 137 LPPAPVQCIYGEDEDD 152 (192)
T ss_pred CCCCeEEEEEcCCCCC
Confidence 54 5999999988765
No 145
>KOG3101|consensus
Probab=98.76 E-value=5.6e-08 Score=74.00 Aligned_cols=163 Identities=13% Similarity=0.184 Sum_probs=95.7
Q ss_pred CCCCeEEEEecCCccccchhh--HHHHhhccccceeEEEeeccCcCCCCcc---CCCCC-----------CChhhHHHHH
Q psy4394 88 PNARFTILFSHGNAVDIGQMS--SFFTGLGSRINCNIFSYDYSGYDYSGYG---ISTGR-----------PSEKNLYADI 151 (286)
Q Consensus 88 ~~~~p~vv~~HG~~~~~~~~~--~~~~~l~~~~g~~vi~~d~~~~~~~G~G---~s~~~-----------~~~~~~~~d~ 151 (286)
+++-|++.++-|.....+.+. ..++..+.+.|..|+.+|- .+||.. ..+.. .+.+-+ ..-
T Consensus 41 ~k~~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDT---SPRG~~v~g~~eswDFG~GAGFYvnAt~epw-~~~ 116 (283)
T KOG3101|consen 41 GKRCPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDT---SPRGVEVAGDDESWDFGQGAGFYVNATQEPW-AKH 116 (283)
T ss_pred CCcCceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCC---CCCccccCCCcccccccCCceeEEecccchH-hhh
Confidence 344699999999887665544 3456666677999999996 235542 11100 111111 111
Q ss_pred HHHHHHHHHH---------hCCCCCcEEEEEeecChHHHHHHHhhc--CccEEEEeCCCCcccccccccccccccccccc
Q psy4394 152 DAAWNTLRTR---------YGISPENIILYGQSIGTVPTIDLASRY--QVGAVILHSPLMSGMRVAFPRTKRTWFFDVFP 220 (286)
Q Consensus 152 ~~~~~~l~~~---------~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~ 220 (286)
-.+.+|+.++ ..+|+.++.|.||||||.-|+-.+.+. +.+.+-+.+|+.+..... |-.+.+.
T Consensus 117 yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP~~cp-------WGqKAf~ 189 (283)
T KOG3101|consen 117 YRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNPINCP-------WGQKAFT 189 (283)
T ss_pred hhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccCcccCc-------chHHHhh
Confidence 2233333332 357888999999999999998887776 778888888877643222 1112222
Q ss_pred hhhhcccccccccCCccccCCCCCCCCCCEEEEecCCCCccC
Q psy4394 221 RVIFANVKTPIMGLSTLENIDKVPKVTSPVLVIHGTEDEVID 262 (286)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~ 262 (286)
..+. .-...+..++....+...+....-+||=+|+.|....
T Consensus 190 gYLG-~~ka~W~~yDat~lik~y~~~~~~ilIdqG~~D~Fl~ 230 (283)
T KOG3101|consen 190 GYLG-DNKAQWEAYDATHLIKNYRGVGDDILIDQGAADNFLA 230 (283)
T ss_pred cccC-CChHHHhhcchHHHHHhcCCCCccEEEecCccchhhh
Confidence 1111 1112222233333344455556678999999998877
No 146
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=98.73 E-value=2.7e-07 Score=77.93 Aligned_cols=124 Identities=15% Similarity=0.102 Sum_probs=82.9
Q ss_pred ccCCCEEEEEEE-eecCCCCeEEEEecCCccccch-h-hHHHHhhccccceeEEEeeccCcCCCCccCCCCC--------
Q psy4394 73 TSRGNRLACMFM-KCSPNARFTILFSHGNAVDIGQ-M-SSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGR-------- 141 (286)
Q Consensus 73 ~~~g~~l~~~~~-~~~~~~~p~vv~~HG~~~~~~~-~-~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~-------- 141 (286)
.....+|.+++. ....+.+..|+++.|+|++... + ....+.+|++.+..|+.++| -+.|.....
T Consensus 16 ikR~sKLEyri~ydd~Ke~kaIvfiI~GfG~dan~~~~d~~r~~iA~~fnvv~I~V~Y-----HCf~~R~q~~A~~~~~~ 90 (403)
T PF11144_consen 16 IKRESKLEYRISYDDEKEIKAIVFIIPGFGADANSNYLDFMREYIAKKFNVVVISVNY-----HCFCNRPQYGAKFYFDD 90 (403)
T ss_pred ccccceeeEEeecCCCCCceEEEEEeCCcCCCcchHHHHHHHHHHHHhCCEEEEEeee-----eheeeccccCchhcCCH
Confidence 334456666653 2234457889999999998753 3 35566677787889999999 776633210
Q ss_pred --------------------CC-h-----------------------------------------h----hHHHHHHHHH
Q psy4394 142 --------------------PS-E-----------------------------------------K----NLYADIDAAW 155 (286)
Q Consensus 142 --------------------~~-~-----------------------------------------~----~~~~d~~~~~ 155 (286)
.+ . + ....|+..++
T Consensus 91 ~D~~iLk~~L~~i~i~~~~i~~~~~~~~~~~~L~~~I~~lK~~~~L~~d~kl~ls~tl~P~n~EYQN~GIMqAiD~INAl 170 (403)
T PF11144_consen 91 IDKEILKKSLEKINIDSESINTYDNAEQIYELLNQNITELKEQGILPQDYKLNLSCTLIPPNGEYQNFGIMQAIDIINAL 170 (403)
T ss_pred HHHHHHHHHHHHcCccccccccchhHHHHHHHHHHHHHHHHhcCCCCCCcEEeEEEEecCCchhhhhhHHHHHHHHHHHH
Confidence 00 0 0 0124777778
Q ss_pred HHHHHHhCCCCC--cEEEEEeecChHHHHHHHhhc--CccEEEEeCCCCc
Q psy4394 156 NTLRTRYGISPE--NIILYGQSIGTVPTIDLASRY--QVGAVILHSPLMS 201 (286)
Q Consensus 156 ~~l~~~~~~~~~--~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~~ 201 (286)
.++.+.+.-... +++++|+|.||++|...|.-. -+++++-.|....
T Consensus 171 ~~l~k~~~~~~~~lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~ 220 (403)
T PF11144_consen 171 LDLKKIFPKNGGGLPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYAL 220 (403)
T ss_pred HHHHHhhhcccCCCcEEEEecCcHHHHHHHHHhhCccceeEEEecCcccc
Confidence 888777643333 899999999999999888766 7777777666543
No 147
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=98.71 E-value=3.2e-07 Score=78.72 Aligned_cols=97 Identities=14% Similarity=0.168 Sum_probs=64.9
Q ss_pred eEEEEecCCccccch-hhHHHHhhccccceeEEEeeccCcCCCCcc---CCCCCCChhhHHHHHHHHHHHHHHHhCCCCC
Q psy4394 92 FTILFSHGNAVDIGQ-MSSFFTGLGSRINCNIFSYDYSGYDYSGYG---ISTGRPSEKNLYADIDAAWNTLRTRYGISPE 167 (286)
Q Consensus 92 p~vv~~HG~~~~~~~-~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G---~s~~~~~~~~~~~d~~~~~~~l~~~~~~~~~ 167 (286)
|.||++.-..++... .+...+.+. . |+.|+..|+ ..-+ .+.+..+.+++++-+.++++.+ | +
T Consensus 103 ~pvLiV~Pl~g~~~~L~RS~V~~Ll-~-g~dVYl~DW-----~~p~~vp~~~~~f~ldDYi~~l~~~i~~~----G--~- 168 (406)
T TIGR01849 103 PAVLIVAPMSGHYATLLRSTVEALL-P-DHDVYITDW-----VNARMVPLSAGKFDLEDYIDYLIEFIRFL----G--P- 168 (406)
T ss_pred CcEEEEcCCchHHHHHHHHHHHHHh-C-CCcEEEEeC-----CCCCCCchhcCCCCHHHHHHHHHHHHHHh----C--C-
Confidence 678888877654432 356677776 4 999999999 5444 3334555555554444444333 3 3
Q ss_pred cEEEEEeecChHHHHHHHhhc-------CccEEEEeCCCCcc
Q psy4394 168 NIILYGQSIGTVPTIDLASRY-------QVGAVILHSPLMSG 202 (286)
Q Consensus 168 ~i~l~G~S~Gg~~a~~~a~~~-------~i~~~v~~~p~~~~ 202 (286)
++.++|+|+||.+++.+++.. .++.++++++.+|.
T Consensus 169 ~v~l~GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~ 210 (406)
T TIGR01849 169 DIHVIAVCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDA 210 (406)
T ss_pred CCcEEEEchhhHHHHHHHHHHHhcCCCCCcceEEEEecCccC
Confidence 499999999999877665543 58999988776663
No 148
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=98.71 E-value=1.5e-07 Score=76.19 Aligned_cols=204 Identities=14% Similarity=0.173 Sum_probs=105.6
Q ss_pred EeccCCCEEEEEEEeecCCCCeEEEEecCCccccch-hhH-----HHHhhccccceeEEEeeccCcCCCCccCCCCCCCh
Q psy4394 71 TRTSRGNRLACMFMKCSPNARFTILFSHGNAVDIGQ-MSS-----FFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSE 144 (286)
Q Consensus 71 ~~~~~g~~l~~~~~~~~~~~~p~vv~~HG~~~~~~~-~~~-----~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~~ 144 (286)
++|.-| .++........+++|++|=+|-.|-+... +.. -+..+.+ .+.++-+|. ||+.........
T Consensus 4 v~t~~G-~v~V~v~G~~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~--~f~i~Hi~a-----PGqe~ga~~~p~ 75 (283)
T PF03096_consen 4 VETPYG-SVHVTVQGDPKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQ--NFCIYHIDA-----PGQEEGAATLPE 75 (283)
T ss_dssp EEETTE-EEEEEEESS--TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHT--TSEEEEEE------TTTSTT-----T
T ss_pred eccCce-EEEEEEEecCCCCCceEEEeccccccchHHHHHHhcchhHHHHhh--ceEEEEEeC-----CCCCCCcccccc
Confidence 445555 56665554333468999999998876544 333 3344443 689999999 998653322110
Q ss_pred ---hhHHHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc--CccEEEEeCCCCccccc---ccccccc----
Q psy4394 145 ---KNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY--QVGAVILHSPLMSGMRV---AFPRTKR---- 212 (286)
Q Consensus 145 ---~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~~~~~~---~~~~~~~---- 212 (286)
.-..+++.+.+..+.++++++ .++-+|--.||++-..+|..+ ++.|+|+++|....... .......
T Consensus 76 ~y~yPsmd~LAe~l~~Vl~~f~lk--~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~gw~Ew~~~K~~~~~L~ 153 (283)
T PF03096_consen 76 GYQYPSMDQLAEMLPEVLDHFGLK--SVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAGWMEWFYQKLSSWLLY 153 (283)
T ss_dssp T-----HHHHHCTHHHHHHHHT-----EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---HHHHHHHHHH-----
T ss_pred cccccCHHHHHHHHHHHHHhCCcc--EEEEEeeccchhhhhhccccCccceeEEEEEecCCCCccHHHHHHHHHhccccc
Confidence 111355666666666677766 899999999999999999998 99999999986542110 0000000
Q ss_pred -cc---------cccccchhhhcc---------------cc-cc----cccCCcc-ccCCCCCCCCCCEEEEecCCCCcc
Q psy4394 213 -TW---------FFDVFPRVIFAN---------------VK-TP----IMGLSTL-ENIDKVPKVTSPVLVIHGTEDEVI 261 (286)
Q Consensus 213 -~~---------~~~~~~~~~~~~---------------~~-~~----~~~~~~~-~~~~~~~~i~~Pvlii~G~~D~~v 261 (286)
.- ....|....... .. .+ ...+... +.....+...||+|++.|+.-+.
T Consensus 154 ~~gmt~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~~c~vLlvvG~~Sp~- 232 (283)
T PF03096_consen 154 SYGMTSSVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALFLNSYNSRTDLSIERPSLGCPVLLVVGDNSPH- 232 (283)
T ss_dssp --CTTS-HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----SECTTCCS-EEEEEETTSTT-
T ss_pred ccccccchHHhhhhcccccccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhcCCCCCCeEEEEecCCcc-
Confidence 00 001111000000 00 00 0011111 12233455569999999977665
Q ss_pred ChhHHHHHHHHCCCC-CCceEecCCC
Q psy4394 262 DLSHGIAIYERCPRP-VEPLWVEGLS 286 (286)
Q Consensus 262 ~~~~~~~l~~~~~~~-~~~~~~~ga~ 286 (286)
.+.+.++.+++.+. .+++.++++|
T Consensus 233 -~~~vv~~ns~Ldp~~ttllkv~dcG 257 (283)
T PF03096_consen 233 -VDDVVEMNSKLDPTKTTLLKVADCG 257 (283)
T ss_dssp -HHHHHHHHHHS-CCCEEEEEETT-T
T ss_pred -hhhHHHHHhhcCcccceEEEecccC
Confidence 55788999999665 5788888774
No 149
>KOG3253|consensus
Probab=98.71 E-value=1.6e-07 Score=81.93 Aligned_cols=160 Identities=14% Similarity=0.078 Sum_probs=101.6
Q ss_pred CCeEEEEecCCc--cccchhhHHHHhhcccc--ceeEEEeeccCcCCCCccCCCCCCChhhHHHHHHHHHHHHHHH--hC
Q psy4394 90 ARFTILFSHGNA--VDIGQMSSFFTGLGSRI--NCNIFSYDYSGYDYSGYGISTGRPSEKNLYADIDAAWNTLRTR--YG 163 (286)
Q Consensus 90 ~~p~vv~~HG~~--~~~~~~~~~~~~l~~~~--g~~vi~~d~~~~~~~G~G~s~~~~~~~~~~~d~~~~~~~l~~~--~~ 163 (286)
..|.+|+.||.+ .....+...+....... -..+-.+|+ +.- .++ .......+.+..+.++...+ ..
T Consensus 175 ~spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl-----~n~--igG-~nI~h~ae~~vSf~r~kvlei~ge 246 (784)
T KOG3253|consen 175 ASPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDL-----NNP--IGG-ANIKHAAEYSVSFDRYKVLEITGE 246 (784)
T ss_pred CCceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccc-----cCC--CCC-cchHHHHHHHHHHhhhhhhhhhcc
Confidence 358899999987 11222222222222111 245556666 321 111 22233344455555543333 23
Q ss_pred CCCCcEEEEEeecChHHHHHHHhhc---CccEEEEeCCCCcccccccccccccccccccchhhhcccccccccCCccccC
Q psy4394 164 ISPENIILYGQSIGTVPTIDLASRY---QVGAVILHSPLMSGMRVAFPRTKRTWFFDVFPRVIFANVKTPIMGLSTLENI 240 (286)
Q Consensus 164 ~~~~~i~l~G~S~Gg~~a~~~a~~~---~i~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (286)
+...+|+|+|+|||+.++.+++... .|+++|+++=..+..+..- . ...
T Consensus 247 fpha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~vdgpr-----g------------------------irD 297 (784)
T KOG3253|consen 247 FPHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVDGPR-----G------------------------IRD 297 (784)
T ss_pred CCCCceEEEecccCceeeEEeccccCCceEEEEEEecccccCCCccc-----C------------------------Ccc
Confidence 4567999999999988888777665 5899998864443211100 0 023
Q ss_pred CCCCCCCCCEEEEecCCCCccChhHHHHHHHHCCCCCCceEecCCC
Q psy4394 241 DKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPRPVEPLWVEGLS 286 (286)
Q Consensus 241 ~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~ga~ 286 (286)
+.+-.++.|+|++.|.+|..++++..+++.++++...+++++.++|
T Consensus 298 E~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA~~elhVI~~ad 343 (784)
T KOG3253|consen 298 EALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQAEVELHVIGGAD 343 (784)
T ss_pred hhhHhcCCceEEEecCCcccCCHHHHHHHHHHhhccceEEEecCCC
Confidence 4455678899999999999999999999999999998999999886
No 150
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=98.67 E-value=1.2e-07 Score=85.99 Aligned_cols=119 Identities=20% Similarity=0.194 Sum_probs=71.3
Q ss_pred EEEEEEeecC---C-CCeEEEEecCCccccchh---hHHHHhhccccceeEEEeecc-CcCCCCccCCCCCCC--hhhHH
Q psy4394 79 LACMFMKCSP---N-ARFTILFSHGNAVDIGQM---SSFFTGLGSRINCNIFSYDYS-GYDYSGYGISTGRPS--EKNLY 148 (286)
Q Consensus 79 l~~~~~~~~~---~-~~p~vv~~HG~~~~~~~~---~~~~~~l~~~~g~~vi~~d~~-~~~~~G~G~s~~~~~--~~~~~ 148 (286)
|..-++.|.. + +.|++|++||++...+.- ......++...+..|+.++|| |. -|+-.+..... -..-+
T Consensus 109 L~LnI~~P~~~~~~~~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~--~Gfl~~~~~~~~~gN~Gl 186 (535)
T PF00135_consen 109 LYLNIYTPSNASSNSKLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGA--FGFLSLGDLDAPSGNYGL 186 (535)
T ss_dssp -EEEEEEETSSSSTTSEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HH--HHH-BSSSTTSHBSTHHH
T ss_pred HHHhhhhccccccccccceEEEeecccccCCCcccccccccccccCCCEEEEEecccccc--cccccccccccCchhhhh
Confidence 4444555531 2 469999999987543221 122223333459999999993 11 13322221111 23346
Q ss_pred HHHHHHHHHHHHH---hCCCCCcEEEEEeecChHHHHHHHhhc----CccEEEEeCCC
Q psy4394 149 ADIDAAWNTLRTR---YGISPENIILYGQSIGTVPTIDLASRY----QVGAVILHSPL 199 (286)
Q Consensus 149 ~d~~~~~~~l~~~---~~~~~~~i~l~G~S~Gg~~a~~~a~~~----~i~~~v~~~p~ 199 (286)
.|...+++|++++ +|-|+++|.|+|+|.||..+..++... -++++|+.|+.
T Consensus 187 ~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs 244 (535)
T PF00135_consen 187 LDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGS 244 (535)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--
T ss_pred hhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeeccccccccccccccccc
Confidence 8999999999987 466899999999999998776655433 78999999873
No 151
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.66 E-value=2.2e-07 Score=74.60 Aligned_cols=106 Identities=14% Similarity=0.195 Sum_probs=69.7
Q ss_pred CCCeEEEEecCCccccchhhHHHHhhccccce--eEEEeeccCcCCCCccCCCCCCCh----hhHHHHHHHHHHHHHHHh
Q psy4394 89 NARFTILFSHGNAVDIGQMSSFFTGLGSRINC--NIFSYDYSGYDYSGYGISTGRPSE----KNLYADIDAAWNTLRTRY 162 (286)
Q Consensus 89 ~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~--~vi~~d~~~~~~~G~G~s~~~~~~----~~~~~d~~~~~~~l~~~~ 162 (286)
+.+.++||+||+..+.......+..+....++ .++.+.| |..|...+.... .....++..+++.+.+..
T Consensus 16 ~~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsW-----PS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~ 90 (233)
T PF05990_consen 16 PDKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSW-----PSDGSLLGYFYDRESARFSGPALARFLRDLARAP 90 (233)
T ss_pred CCCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEc-----CCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhcc
Confidence 46789999999988765544444444433333 7999999 877753322111 111245555555555553
Q ss_pred CCCCCcEEEEEeecChHHHHHHHhhc-----------CccEEEEeCCCCc
Q psy4394 163 GISPENIILYGQSIGTVPTIDLASRY-----------QVGAVILHSPLMS 201 (286)
Q Consensus 163 ~~~~~~i~l~G~S~Gg~~a~~~a~~~-----------~i~~~v~~~p~~~ 201 (286)
+ ..+|.|++||||+.+.+...... .+..+|+.+|=.+
T Consensus 91 ~--~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid 138 (233)
T PF05990_consen 91 G--IKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDID 138 (233)
T ss_pred C--CceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCC
Confidence 3 45999999999999988876542 4678888888655
No 152
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.61 E-value=3.1e-07 Score=74.94 Aligned_cols=121 Identities=14% Similarity=0.079 Sum_probs=76.0
Q ss_pred CCEEEEEEEeec----CCCCeEEEEecCCccccc--hhhHHHHhhcccc---ceeEEEeeccCcCCCCccCC--------
Q psy4394 76 GNRLACMFMKCS----PNARFTILFSHGNAVDIG--QMSSFFTGLGSRI---NCNIFSYDYSGYDYSGYGIS-------- 138 (286)
Q Consensus 76 g~~l~~~~~~~~----~~~~p~vv~~HG~~~~~~--~~~~~~~~l~~~~---g~~vi~~d~~~~~~~G~G~s-------- 138 (286)
|.....+++.|. .++.|+|+++||...... .....+..+..+. -..+++++. -+.+..
T Consensus 5 g~~~~~~VylP~~y~~~~~~PvlylldG~~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~-----~~~~~~~~~~~~~~ 79 (251)
T PF00756_consen 5 GRDRRVWVYLPPGYDPSKPYPVLYLLDGQSGWFRNGNAQEALDRLIAEGKIPPMIIVVIPN-----GDNSRFYTSWYLPA 79 (251)
T ss_dssp TEEEEEEEEECTTGGTTTTEEEEEEESHTTHHHHHHHHHHHHHHHHHHHTSEEEEEEEEES-----SSTSSTTSBTTSSB
T ss_pred CCeEEEEEEECCCCCCCCCCEEEEEccCCccccccchHHHHHHHHHHhCCCCceEEEEEec-----cccccccccccccc
Confidence 445555655552 456799999999622111 1223343333321 245566666 333200
Q ss_pred ---C--CC-CChhhHHHH-HHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc--CccEEEEeCCCCc
Q psy4394 139 ---T--GR-PSEKNLYAD-IDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY--QVGAVILHSPLMS 201 (286)
Q Consensus 139 ---~--~~-~~~~~~~~d-~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~~ 201 (286)
. .. .....+.+. ..+++.++.+++.+.+++.+|+|+||||..|+.++.++ .+.+++++||..+
T Consensus 80 ~~~~~~~~~~~~~~~~~~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~ 151 (251)
T PF00756_consen 80 GSSRRADDSGGGDAYETFLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALD 151 (251)
T ss_dssp CTTCBCTSTTTHHHHHHHHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESE
T ss_pred ccccccccCCCCcccceehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCcccc
Confidence 0 00 111222222 35788899999987766699999999999999999998 8999999999866
No 153
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.60 E-value=2.7e-07 Score=72.77 Aligned_cols=87 Identities=13% Similarity=0.121 Sum_probs=53.4
Q ss_pred EEEEecCCcc-ccchhhHHHHhhcccccee---EEEeeccCcCCCCccCCCCC---CChhhHHHHHHHHHHHHHHHhCCC
Q psy4394 93 TILFSHGNAV-DIGQMSSFFTGLGSRINCN---IFSYDYSGYDYSGYGISTGR---PSEKNLYADIDAAWNTLRTRYGIS 165 (286)
Q Consensus 93 ~vv~~HG~~~-~~~~~~~~~~~l~~~~g~~---vi~~d~~~~~~~G~G~s~~~---~~~~~~~~d~~~~~~~l~~~~~~~ 165 (286)
.|||+||.++ ....|....+.|. +.||. +++++| -........ ....+...++.++++.+++..+
T Consensus 3 PVVlVHG~~~~~~~~w~~~~~~l~-~~GY~~~~vya~ty-----g~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TG-- 74 (219)
T PF01674_consen 3 PVVLVHGTGGNAYSNWSTLAPYLK-AAGYCDSEVYALTY-----GSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTG-- 74 (219)
T ss_dssp -EEEE--TTTTTCGGCCHHHHHHH-HTT--CCCEEEE-------S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT--
T ss_pred CEEEECCCCcchhhCHHHHHHHHH-HcCCCcceeEeccC-----CCCCCCCcccccccchhhHHHHHHHHHHHHHhhC--
Confidence 5999999998 4567888888777 45999 799999 222111100 0112223678888888887765
Q ss_pred CCcEEEEEeecChHHHHHHHhhc
Q psy4394 166 PENIILYGQSIGTVPTIDLASRY 188 (286)
Q Consensus 166 ~~~i~l~G~S~Gg~~a~~~a~~~ 188 (286)
. +|-|+||||||.++-.+....
T Consensus 75 a-kVDIVgHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 75 A-KVDIVGHSMGGTIARYYIKGG 96 (219)
T ss_dssp ---EEEEEETCHHHHHHHHHHHC
T ss_pred C-EEEEEEcCCcCHHHHHHHHHc
Confidence 4 999999999999988887543
No 154
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=98.58 E-value=1.2e-06 Score=77.35 Aligned_cols=122 Identities=11% Similarity=0.108 Sum_probs=81.1
Q ss_pred CCEEEEEEEeec--CCCCeEEEEecCCccccchhhHHHH-----------hh-----ccccceeEEEeeccCcCCCCccC
Q psy4394 76 GNRLACMFMKCS--PNARFTILFSHGNAVDIGQMSSFFT-----------GL-----GSRINCNIFSYDYSGYDYSGYGI 137 (286)
Q Consensus 76 g~~l~~~~~~~~--~~~~p~vv~~HG~~~~~~~~~~~~~-----------~l-----~~~~g~~vi~~d~~~~~~~G~G~ 137 (286)
+..+.+|+++.. +...|+||+++|+++.......+.+ .+ .-..-.+++.+|. +.|+|.
T Consensus 60 ~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~~~~l~iDq----P~G~G~ 135 (462)
T PTZ00472 60 DKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNEAYVIYVDQ----PAGVGF 135 (462)
T ss_pred CceEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccccccCeEEEeC----CCCcCc
Confidence 567888988763 3467999999999887644321110 00 0011367888886 148887
Q ss_pred CCCC-----CChhhHHHHHHHHHHHHHHHh-CCCCCcEEEEEeecChHHHHHHHhhc------------CccEEEEeCCC
Q psy4394 138 STGR-----PSEKNLYADIDAAWNTLRTRY-GISPENIILYGQSIGTVPTIDLASRY------------QVGAVILHSPL 199 (286)
Q Consensus 138 s~~~-----~~~~~~~~d~~~~~~~l~~~~-~~~~~~i~l~G~S~Gg~~a~~~a~~~------------~i~~~v~~~p~ 199 (286)
|-.. .+.....+|+.++++.+.+++ .+...+++|+|+|+||..+..+|.+. .++++++.+|+
T Consensus 136 S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~ 215 (462)
T PTZ00472 136 SYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGL 215 (462)
T ss_pred ccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEeccc
Confidence 7543 223455678877777665554 23457999999999998887766541 57899998887
Q ss_pred Cc
Q psy4394 200 MS 201 (286)
Q Consensus 200 ~~ 201 (286)
++
T Consensus 216 ~d 217 (462)
T PTZ00472 216 TD 217 (462)
T ss_pred cC
Confidence 65
No 155
>KOG2565|consensus
Probab=98.52 E-value=6e-07 Score=74.21 Aligned_cols=114 Identities=20% Similarity=0.265 Sum_probs=86.7
Q ss_pred CCCEEEEEEEeecC----CCCeEEEEecCCccccchhhHHHHhhcccc--------ceeEEEeeccCcCCCCccCCCCCC
Q psy4394 75 RGNRLACMFMKCSP----NARFTILFSHGNAVDIGQMSSFFTGLGSRI--------NCNIFSYDYSGYDYSGYGISTGRP 142 (286)
Q Consensus 75 ~g~~l~~~~~~~~~----~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~--------g~~vi~~d~~~~~~~G~G~s~~~~ 142 (286)
.|.+++.....|.+ ++...++++||++++..++..+++-|.... -+.|+++.+ ||+|.|++..
T Consensus 132 eGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSl-----PGygwSd~~s 206 (469)
T KOG2565|consen 132 EGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSL-----PGYGWSDAPS 206 (469)
T ss_pred cceeEEEEEecCCccccCCcccceEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCC-----CCcccCcCCc
Confidence 79999988876631 222468999999999988888887765431 388999999 9999998654
Q ss_pred ChhhHHHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc--CccEEEE
Q psy4394 143 SEKNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY--QVGAVIL 195 (286)
Q Consensus 143 ~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~ 195 (286)
..---......+++.+.-++|.+ +++|-|.-+|..++..+|..+ .|.|+=+
T Consensus 207 k~GFn~~a~ArvmrkLMlRLg~n--kffiqGgDwGSiI~snlasLyPenV~GlHl 259 (469)
T KOG2565|consen 207 KTGFNAAATARVMRKLMLRLGYN--KFFIQGGDWGSIIGSNLASLYPENVLGLHL 259 (469)
T ss_pred cCCccHHHHHHHHHHHHHHhCcc--eeEeecCchHHHHHHHHHhhcchhhhHhhh
Confidence 32222345677778888888866 999999999999999999987 6655433
No 156
>KOG2931|consensus
Probab=98.51 E-value=6.5e-06 Score=66.21 Aligned_cols=121 Identities=13% Similarity=0.132 Sum_probs=82.3
Q ss_pred cccEEEeccCCCEEEEEEEeecCCCCeEEEEecCCccccch-hh-----HHHHhhccccceeEEEeeccCcCCCCccCCC
Q psy4394 66 IEGFFTRTSRGNRLACMFMKCSPNARFTILFSHGNAVDIGQ-MS-----SFFTGLGSRINCNIFSYDYSGYDYSGYGIST 139 (286)
Q Consensus 66 ~~~~~~~~~~g~~l~~~~~~~~~~~~p~vv~~HG~~~~~~~-~~-----~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~ 139 (286)
.++..+.|..| .++..++...++++|++|-+|..+-+... +. +.+..+.+ .+.++-+|- ||+-...
T Consensus 22 ~~e~~V~T~~G-~v~V~V~Gd~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~--~fcv~HV~~-----PGqe~gA 93 (326)
T KOG2931|consen 22 CQEHDVETAHG-VVHVTVYGDPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILE--HFCVYHVDA-----PGQEDGA 93 (326)
T ss_pred ceeeeeccccc-cEEEEEecCCCCCCceEEEecccccchHhHhHHhhcCHhHHHHHh--heEEEecCC-----CccccCC
Confidence 45566667665 45666664333468889999998876543 33 33444443 488899999 9885432
Q ss_pred C-------CCChhhHHHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc--CccEEEEeCCCC
Q psy4394 140 G-------RPSEKNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY--QVGAVILHSPLM 200 (286)
Q Consensus 140 ~-------~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~ 200 (286)
. .|+.+ ++.+.+-.+.+++++. .++-+|.-.|+++-.++|..+ +|-|+|++++..
T Consensus 94 p~~p~~y~yPsmd----~LAd~l~~VL~~f~lk--~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~ 157 (326)
T KOG2931|consen 94 PSFPEGYPYPSMD----DLADMLPEVLDHFGLK--SVIGMGVGAGAYILARFALNHPERVLGLVLINCDP 157 (326)
T ss_pred ccCCCCCCCCCHH----HHHHHHHHHHHhcCcc--eEEEecccccHHHHHHHHhcChhheeEEEEEecCC
Confidence 2 13334 4444444455555544 899999999999999999998 999999998754
No 157
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=98.47 E-value=4e-08 Score=81.82 Aligned_cols=177 Identities=21% Similarity=0.213 Sum_probs=104.1
Q ss_pred CCeEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCCChhhHHHHHHHHHHHHHHHh-CCCCCc
Q psy4394 90 ARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSEKNLYADIDAAWNTLRTRY-GISPEN 168 (286)
Q Consensus 90 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~~~~~~~d~~~~~~~l~~~~-~~~~~~ 168 (286)
....++..||...+......+........++.++..|+ ++++.+.+.........+...+..++.... ..+..+
T Consensus 87 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 161 (299)
T COG1073 87 FGESGGDPRGLADSEGYAEDFSAAVLLLLSEGVLDKDY-----RLLGASLGPRILAGLSLGGPSAGALLAWGPTRLDASR 161 (299)
T ss_pred ccccccccccccCccccccccchhheeeeccccccHHH-----HHHhhhcCcceEEEEEeeccchHHHhhcchhHHHhhc
Confidence 44567788887555444433333333344788888888 888888766555554444444444444332 113448
Q ss_pred EEEEEeecChHHHHHHHhh-----c-CccEEEEeCCCCcccccccccccccccccccchhhhcccccccccCCccccCCC
Q psy4394 169 IILYGQSIGTVPTIDLASR-----Y-QVGAVILHSPLMSGMRVAFPRTKRTWFFDVFPRVIFANVKTPIMGLSTLENIDK 242 (286)
Q Consensus 169 i~l~G~S~Gg~~a~~~a~~-----~-~i~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (286)
+.++|.|+||..++..... . .+..++..+++... . ........... . ...+...+....
T Consensus 162 ~~~~g~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~--------~-~~~~~~~d~~~~ 226 (299)
T COG1073 162 IVVWGESLGGALALLLLGANPELARELIDYLITPGGFAPL---P---APEAPLDTLPL--------R-AVLLLLLDPFDD 226 (299)
T ss_pred ccceeeccCceeeccccccchHHHHhhhhhhccCCCCCCC---C---ccccccccccc--------c-hhhhccCcchhh
Confidence 8899999999887775543 1 44444444444432 0 00000000000 0 011122223344
Q ss_pred CCCCC-CCEEEEecCCCCccChhHHHHHHHHCCC-CCCceEecCCC
Q psy4394 243 VPKVT-SPVLVIHGTEDEVIDLSHGIAIYERCPR-PVEPLWVEGLS 286 (286)
Q Consensus 243 ~~~i~-~Pvlii~G~~D~~v~~~~~~~l~~~~~~-~~~~~~~~ga~ 286 (286)
+.++. +|+|++||.+|..||...+..+++.... +++.+++++++
T Consensus 227 ~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (299)
T COG1073 227 AEKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGG 272 (299)
T ss_pred HhhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCc
Confidence 44455 7999999999999999999999999888 66777777763
No 158
>KOG3975|consensus
Probab=98.46 E-value=4.3e-06 Score=65.56 Aligned_cols=105 Identities=16% Similarity=0.231 Sum_probs=73.2
Q ss_pred CCCeEEEEecCCccccchhhHHHHhhccccc--eeEEEeeccCcCCCCccCCCC------CC---ChhhHHHHHHHHHHH
Q psy4394 89 NARFTILFSHGNAVDIGQMSSFFTGLGSRIN--CNIFSYDYSGYDYSGYGISTG------RP---SEKNLYADIDAAWNT 157 (286)
Q Consensus 89 ~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~g--~~vi~~d~~~~~~~G~G~s~~------~~---~~~~~~~d~~~~~~~ 157 (286)
..++.++++.|+++..+.+.++...+....+ ..+..+-. -||-.-.. .. ..-+..+.+..-+++
T Consensus 27 ~~~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh-----~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaF 101 (301)
T KOG3975|consen 27 EDKPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISH-----AGHALMPASLREDHSHTNEEIFSLQDQVDHKLAF 101 (301)
T ss_pred CCceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEec-----cccccCCcccccccccccccccchhhHHHHHHHH
Confidence 5679999999999999999988888776544 44566555 56543321 11 112223455666777
Q ss_pred HHHHhCCCCCcEEEEEeecChHHHHHHHhhc----CccEEEEeCCC
Q psy4394 158 LRTRYGISPENIILYGQSIGTVPTIDLASRY----QVGAVILHSPL 199 (286)
Q Consensus 158 l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~----~i~~~v~~~p~ 199 (286)
+++... ...+++++|||.|+++.+.+.... .+.+++++-|-
T Consensus 102 ik~~~P-k~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPT 146 (301)
T KOG3975|consen 102 IKEYVP-KDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPT 146 (301)
T ss_pred HHHhCC-CCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecch
Confidence 776643 346999999999999999988744 77788887664
No 159
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.43 E-value=1.1e-06 Score=76.71 Aligned_cols=92 Identities=12% Similarity=0.113 Sum_probs=70.0
Q ss_pred ccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCCC-hhhHHHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHH
Q psy4394 103 DIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPS-EKNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPT 181 (286)
Q Consensus 103 ~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~-~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a 181 (286)
....|..+++.|.+ .||.+ ..|+ +|+|.+..... .....+++.+.++.+.+..+. +++.|+||||||.++
T Consensus 106 ~~~~~~~li~~L~~-~GY~~-~~dL-----~g~gYDwR~~~~~~~~~~~Lk~lIe~~~~~~g~--~kV~LVGHSMGGlva 176 (440)
T PLN02733 106 EVYYFHDMIEQLIK-WGYKE-GKTL-----FGFGYDFRQSNRLPETMDGLKKKLETVYKASGG--KKVNIISHSMGGLLV 176 (440)
T ss_pred hHHHHHHHHHHHHH-cCCcc-CCCc-----ccCCCCccccccHHHHHHHHHHHHHHHHHHcCC--CCEEEEEECHhHHHH
Confidence 34567778888774 58866 7899 99998776533 345568888888888877653 499999999999999
Q ss_pred HHHHhhc------CccEEEEeCCCCccc
Q psy4394 182 IDLASRY------QVGAVILHSPLMSGM 203 (286)
Q Consensus 182 ~~~a~~~------~i~~~v~~~p~~~~~ 203 (286)
..++..+ .|+.+|++++...+.
T Consensus 177 ~~fl~~~p~~~~k~I~~~I~la~P~~Gs 204 (440)
T PLN02733 177 KCFMSLHSDVFEKYVNSWIAIAAPFQGA 204 (440)
T ss_pred HHHHHHCCHhHHhHhccEEEECCCCCCC
Confidence 9888765 578899988766543
No 160
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=98.40 E-value=3.3e-06 Score=84.54 Aligned_cols=98 Identities=16% Similarity=0.052 Sum_probs=71.0
Q ss_pred CCeEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCCC-CChhhHHHHHHHHHHHHHHHhCCCCCc
Q psy4394 90 ARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGR-PSEKNLYADIDAAWNTLRTRYGISPEN 168 (286)
Q Consensus 90 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~-~~~~~~~~d~~~~~~~l~~~~~~~~~~ 168 (286)
..+.++++||.+++...|..+...+.. ++.|+.++. +|++..... .+...+.+++.+.++. . . ...+
T Consensus 1067 ~~~~l~~lh~~~g~~~~~~~l~~~l~~--~~~v~~~~~-----~g~~~~~~~~~~l~~la~~~~~~i~~---~-~-~~~p 1134 (1296)
T PRK10252 1067 DGPTLFCFHPASGFAWQFSVLSRYLDP--QWSIYGIQS-----PRPDGPMQTATSLDEVCEAHLATLLE---Q-Q-PHGP 1134 (1296)
T ss_pred CCCCeEEecCCCCchHHHHHHHHhcCC--CCcEEEEEC-----CCCCCCCCCCCCHHHHHHHHHHHHHh---h-C-CCCC
Confidence 346799999999988888888887754 699999999 999865322 2334444444444432 2 1 1248
Q ss_pred EEEEEeecChHHHHHHHhhc-----CccEEEEeCCC
Q psy4394 169 IILYGQSIGTVPTIDLASRY-----QVGAVILHSPL 199 (286)
Q Consensus 169 i~l~G~S~Gg~~a~~~a~~~-----~i~~~v~~~p~ 199 (286)
+.++|||+||.+|..+|.+. ++..++++.+.
T Consensus 1135 ~~l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~ 1170 (1296)
T PRK10252 1135 YHLLGYSLGGTLAQGIAARLRARGEEVAFLGLLDTW 1170 (1296)
T ss_pred EEEEEechhhHHHHHHHHHHHHcCCceeEEEEecCC
Confidence 99999999999999998853 77888877653
No 161
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.36 E-value=2.1e-06 Score=69.30 Aligned_cols=98 Identities=16% Similarity=0.227 Sum_probs=70.2
Q ss_pred eEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccC-CCCCCChhhHHHHHHHHHHHHHHHhCCCCCcEE
Q psy4394 92 FTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGI-STGRPSEKNLYADIDAAWNTLRTRYGISPENII 170 (286)
Q Consensus 92 p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~-s~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~ 170 (286)
|+++++|+.++....|..+...+.. -..|+..+. +|++. .....+.+++.+.. ++.+++.. +..++.
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~--~~~v~~l~a-----~g~~~~~~~~~~l~~~a~~y---v~~Ir~~Q--P~GPy~ 68 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGP--LLPVYGLQA-----PGYGAGEQPFASLDDMAAAY---VAAIRRVQ--PEGPYV 68 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhcc--Cceeecccc-----CcccccccccCCHHHHHHHH---HHHHHHhC--CCCCEE
Confidence 4689999999988888888777764 478999999 98874 22334444444444 44444432 245999
Q ss_pred EEEeecChHHHHHHHhhc-----CccEEEEeCCCCc
Q psy4394 171 LYGQSIGTVPTIDLASRY-----QVGAVILHSPLMS 201 (286)
Q Consensus 171 l~G~S~Gg~~a~~~a~~~-----~i~~~v~~~p~~~ 201 (286)
|.|+|+||.+|..+|.+- .+..++++.+...
T Consensus 69 L~G~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 69 LLGWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred EEeeccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 999999999999999875 6777777755443
No 162
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.35 E-value=4.6e-06 Score=65.60 Aligned_cols=102 Identities=16% Similarity=0.221 Sum_probs=72.5
Q ss_pred EEEEecCCccccchhhHHHHhhcccc----ceeEEEeeccCcCCCCc----cCCC--------------CCCChhhHHHH
Q psy4394 93 TILFSHGNAVDIGQMSSFFTGLGSRI----NCNIFSYDYSGYDYSGY----GIST--------------GRPSEKNLYAD 150 (286)
Q Consensus 93 ~vv~~HG~~~~~~~~~~~~~~l~~~~----g~~vi~~d~~~~~~~G~----G~s~--------------~~~~~~~~~~d 150 (286)
..||+||.+++..........+.... .--++.+|- -|. |.-+ ...+...+..-
T Consensus 47 PTIfIhGsgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~-----dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~w 121 (288)
T COG4814 47 PTIFIHGSGGTASSLNGMVNQLLPDYKAGTESLTMTVDV-----DGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKW 121 (288)
T ss_pred ceEEEecCCCChhHHHHHHHHhhhcccccccceEEEEcC-----CCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHH
Confidence 47899999999988888887776532 234566666 442 1111 11222344567
Q ss_pred HHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc-------CccEEEEeCCCCc
Q psy4394 151 IDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY-------QVGAVILHSPLMS 201 (286)
Q Consensus 151 ~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-------~i~~~v~~~p~~~ 201 (286)
+..++.+|.++++++ ++-++||||||.....++..+ .+..+|.+.+.++
T Consensus 122 lk~~msyL~~~Y~i~--k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 122 LKKAMSYLQKHYNIP--KFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHHHHHhcCCc--eeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 788999999999887 999999999998888888765 6778887765443
No 163
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=98.33 E-value=8.3e-06 Score=72.06 Aligned_cols=107 Identities=15% Similarity=0.165 Sum_probs=73.1
Q ss_pred CCeEEEEecCCccccch--hhHHHHhhccccceeEEEeeccCcCCCCccCCCCC----------CChhhHHHHHHHHHHH
Q psy4394 90 ARFTILFSHGNAVDIGQ--MSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGR----------PSEKNLYADIDAAWNT 157 (286)
Q Consensus 90 ~~p~vv~~HG~~~~~~~--~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~----------~~~~~~~~d~~~~~~~ 157 (286)
..|++|++-|-+.-... ....+..++++.|-.+++++. |-+|.|.+. .+.+..++|+..++++
T Consensus 28 ~gpifl~~ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEH-----RyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~ 102 (434)
T PF05577_consen 28 GGPIFLYIGGEGPIEPFWINNGFMWELAKEFGALVVALEH-----RYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRY 102 (434)
T ss_dssp TSEEEEEE--SS-HHHHHHH-HHHHHHHHHHTEEEEEE-------TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCccchhhhcCChHHHHHHHcCCcEEEeeh-----hhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHH
Confidence 37888888664432211 234677788888999999999 999999754 2345667999999999
Q ss_pred HHHHhC-CCCCcEEEEEeecChHHHHHHHhhc--CccEEEEeCCCCc
Q psy4394 158 LRTRYG-ISPENIILYGQSIGTVPTIDLASRY--QVGAVILHSPLMS 201 (286)
Q Consensus 158 l~~~~~-~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~~ 201 (286)
++.+.. .+..+++++|.|+||++|.++-.++ -|.|.++.|+.+.
T Consensus 103 ~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 103 VKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQ 149 (434)
T ss_dssp HHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CC
T ss_pred HHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceee
Confidence 997763 3446999999999999999999998 7788888876654
No 164
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.25 E-value=6.7e-05 Score=62.91 Aligned_cols=155 Identities=14% Similarity=0.126 Sum_probs=97.4
Q ss_pred ccccEEEeccCCCEEEEEEEee-cCCCCeEEEEecCCccccch--h-hHHHHhhccccceeEEEeeccCcCCCCc--cC-
Q psy4394 65 NIEGFFTRTSRGNRLACMFMKC-SPNARFTILFSHGNAVDIGQ--M-SSFFTGLGSRINCNIFSYDYSGYDYSGY--GI- 137 (286)
Q Consensus 65 ~~~~~~~~~~~g~~l~~~~~~~-~~~~~p~vv~~HG~~~~~~~--~-~~~~~~l~~~~g~~vi~~d~~~~~~~G~--G~- 137 (286)
.-|..++.. ++.++-+.+.+. .++.+..||++||.+.+..+ . ......|. ..||+++++.. +.- ..
T Consensus 61 ~~e~~~L~~-~~~~flaL~~~~~~~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~-~~GW~Tlsit~-----P~~~~~~~ 133 (310)
T PF12048_consen 61 ADEVQWLQA-GEERFLALWRPANSAKPQGAVIILPDWGEHPDWPGLIAPLRRELP-DHGWATLSITL-----PDPAPPAS 133 (310)
T ss_pred HhhcEEeec-CCEEEEEEEecccCCCCceEEEEecCCCCCCCcHhHHHHHHHHhh-hcCceEEEecC-----CCcccccC
Confidence 345566644 555555544443 34567899999999876532 2 33334444 56999999988 541 00
Q ss_pred -----------------CCCCC----------------ChhhHHHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHH
Q psy4394 138 -----------------STGRP----------------SEKNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDL 184 (286)
Q Consensus 138 -----------------s~~~~----------------~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~ 184 (286)
..... ....+..-+.+++.++.++. ..+++|+||+.|++.++.+
T Consensus 134 p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~---~~~ivlIg~G~gA~~~~~~ 210 (310)
T PF12048_consen 134 PNRATEAEEVPSAGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQG---GKNIVLIGHGTGAGWAARY 210 (310)
T ss_pred CccCCCCCCCCCCCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcC---CceEEEEEeChhHHHHHHH
Confidence 00000 01122345566777776662 3369999999999999999
Q ss_pred Hhhc---CccEEEEeCCCCcccccccccccccccccccchhhhcccccccccCCccccCCCCCCCCCCEEEEecCCCC
Q psy4394 185 ASRY---QVGAVILHSPLMSGMRVAFPRTKRTWFFDVFPRVIFANVKTPIMGLSTLENIDKVPKVTSPVLVIHGTEDE 259 (286)
Q Consensus 185 a~~~---~i~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~ 259 (286)
..+. .++++|++++....... .. ...+.+.+++.|||=|++.+..
T Consensus 211 la~~~~~~~daLV~I~a~~p~~~~----------n~--------------------~l~~~la~l~iPvLDi~~~~~~ 258 (310)
T PF12048_consen 211 LAEKPPPMPDALVLINAYWPQPDR----------NP--------------------ALAEQLAQLKIPVLDIYSADNP 258 (310)
T ss_pred HhcCCCcccCeEEEEeCCCCcchh----------hh--------------------hHHHHhhccCCCEEEEecCCCh
Confidence 9887 68999999987641100 00 0224566788999999988733
No 165
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.24 E-value=8.3e-06 Score=67.69 Aligned_cols=106 Identities=17% Similarity=0.212 Sum_probs=71.5
Q ss_pred CCCeEEEEecCCccccchhhHHHHhhcccc--ceeEEEeeccCcCCCCccCCCCC----CChhhHHHHHHHHHHHHHHHh
Q psy4394 89 NARFTILFSHGNAVDIGQMSSFFTGLGSRI--NCNIFSYDYSGYDYSGYGISTGR----PSEKNLYADIDAAWNTLRTRY 162 (286)
Q Consensus 89 ~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~--g~~vi~~d~~~~~~~G~G~s~~~----~~~~~~~~d~~~~~~~l~~~~ 162 (286)
..+.++||+||+..+-..-..-...+.... ....+.+.| |..|.--+. .+......+++.++++|.+..
T Consensus 114 ~~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSW-----PS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~ 188 (377)
T COG4782 114 SAKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSW-----PSRGSLLGYNYDRESTNYSRPALERLLRYLATDK 188 (377)
T ss_pred CCCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEc-----CCCCeeeecccchhhhhhhHHHHHHHHHHHHhCC
Confidence 456799999998775544333333333333 345667777 655543322 222233478899999999886
Q ss_pred CCCCCcEEEEEeecChHHHHHHHhhc----------CccEEEEeCCCCc
Q psy4394 163 GISPENIILYGQSIGTVPTIDLASRY----------QVGAVILHSPLMS 201 (286)
Q Consensus 163 ~~~~~~i~l~G~S~Gg~~a~~~a~~~----------~i~~~v~~~p~~~ 201 (286)
.. .+|+|++||||.++++....+- +|+-+|+.+|=.|
T Consensus 189 ~~--~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD 235 (377)
T COG4782 189 PV--KRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDID 235 (377)
T ss_pred CC--ceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCC
Confidence 54 4999999999999998877653 6778888888554
No 166
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.15 E-value=8.6e-06 Score=64.82 Aligned_cols=92 Identities=12% Similarity=0.028 Sum_probs=47.6
Q ss_pred CCCeEEEEecCCccccchhhHHHHhhccc-cceeEEEeeccCcCCCCccCCCCCCChhhHHHHHHHHHHHHHHHh---CC
Q psy4394 89 NARFTILFSHGNAVDIGQMSSFFTGLGSR-INCNIFSYDYSGYDYSGYGISTGRPSEKNLYADIDAAWNTLRTRY---GI 164 (286)
Q Consensus 89 ~~~p~vv~~HG~~~~~~~~~~~~~~l~~~-~g~~vi~~d~~~~~~~G~G~s~~~~~~~~~~~d~~~~~~~l~~~~---~~ 164 (286)
++.-+||++||..++...|..+-..+... ..+.-..+.+ .++.... ..+..+...-...+++++.+.. ..
T Consensus 2 ~~~hLvV~vHGL~G~~~d~~~~~~~l~~~~~~~~~~~i~~-----~~~~~n~-~~T~~gI~~~g~rL~~eI~~~~~~~~~ 75 (217)
T PF05057_consen 2 KPVHLVVFVHGLWGNPADMRYLKNHLEKIPEDLPNARIVV-----LGYSNNE-FKTFDGIDVCGERLAEEILEHIKDYES 75 (217)
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHHHhhhhcchhhhhh-----hcccccc-cccchhhHHHHHHHHHHHHHhcccccc
Confidence 35578999999999887776555544430 0111111122 2211111 1122222222334444444432 11
Q ss_pred CCCcEEEEEeecChHHHHHHHh
Q psy4394 165 SPENIILYGQSIGTVPTIDLAS 186 (286)
Q Consensus 165 ~~~~i~l~G~S~Gg~~a~~~a~ 186 (286)
...+|.++|||+||.++-.+..
T Consensus 76 ~~~~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 76 KIRKISFIGHSLGGLIARYALG 97 (217)
T ss_pred ccccceEEEecccHHHHHHHHH
Confidence 2248999999999988765544
No 167
>COG3150 Predicted esterase [General function prediction only]
Probab=98.15 E-value=1.8e-05 Score=58.28 Aligned_cols=90 Identities=19% Similarity=0.224 Sum_probs=53.0
Q ss_pred EEEecCCccccchhhHHHH-hhccccceeEEEeeccCcCCCCccCCCCCCChhhHHHHHHHHHHHHHHHhCCCCCcEEEE
Q psy4394 94 ILFSHGNAVDIGQMSSFFT-GLGSRINCNIFSYDYSGYDYSGYGISTGRPSEKNLYADIDAAWNTLRTRYGISPENIILY 172 (286)
Q Consensus 94 vv~~HG~~~~~~~~~~~~~-~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~ 172 (286)
||++||+.++.......+. ..... .+..+.| +...+ ....+.+.+-++.+.++.+ .....|+
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~---~~~~i~y----------~~p~l--~h~p~~a~~ele~~i~~~~--~~~p~iv 64 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDE---DVRDIEY----------STPHL--PHDPQQALKELEKAVQELG--DESPLIV 64 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhc---cccceee----------ecCCC--CCCHHHHHHHHHHHHHHcC--CCCceEE
Confidence 8999999887655443332 22211 2223333 22221 1112333444444444443 2359999
Q ss_pred EeecChHHHHHHHhhcCccEEEEeCCCCc
Q psy4394 173 GQSIGTVPTIDLASRYQVGAVILHSPLMS 201 (286)
Q Consensus 173 G~S~Gg~~a~~~a~~~~i~~~v~~~p~~~ 201 (286)
|-|+||+.|.+++.+..+++++ ++|...
T Consensus 65 GssLGGY~At~l~~~~Girav~-~NPav~ 92 (191)
T COG3150 65 GSSLGGYYATWLGFLCGIRAVV-FNPAVR 92 (191)
T ss_pred eecchHHHHHHHHHHhCChhhh-cCCCcC
Confidence 9999999999999999888765 466654
No 168
>COG0627 Predicted esterase [General function prediction only]
Probab=98.11 E-value=5.4e-05 Score=63.26 Aligned_cols=114 Identities=12% Similarity=0.071 Sum_probs=67.6
Q ss_pred CCCeEEEEecCCccccch--hhHHHHhhccccceeEEEeecc--Cc-------CCCCccCC--CCCCC-----h-hhHHH
Q psy4394 89 NARFTILFSHGNAVDIGQ--MSSFFTGLGSRINCNIFSYDYS--GY-------DYSGYGIS--TGRPS-----E-KNLYA 149 (286)
Q Consensus 89 ~~~p~vv~~HG~~~~~~~--~~~~~~~l~~~~g~~vi~~d~~--~~-------~~~G~G~s--~~~~~-----~-~~~~~ 149 (286)
++-|+++++||..++... ...-++..+...|+.++++|-. +. .+.|-+.+ ..... . ..+..
T Consensus 52 ~~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~t 131 (316)
T COG0627 52 RDIPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWET 131 (316)
T ss_pred CCCCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchhH
Confidence 467889999998766322 2234555555668888886430 00 00121111 00000 0 12221
Q ss_pred HH-HHHHHHHHHHhCCCC--CcEEEEEeecChHHHHHHHhhc--CccEEEEeCCCCcc
Q psy4394 150 DI-DAAWNTLRTRYGISP--ENIILYGQSIGTVPTIDLASRY--QVGAVILHSPLMSG 202 (286)
Q Consensus 150 d~-~~~~~~l~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~~~ 202 (286)
-+ .++-..+.+.+..+. ++..++||||||+-|+.+|.++ +++.+...+|+.+.
T Consensus 132 fl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~ 189 (316)
T COG0627 132 FLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSP 189 (316)
T ss_pred HHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceeccccccccc
Confidence 11 233334445555444 2899999999999999999998 89999999998873
No 169
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=98.04 E-value=0.0001 Score=62.64 Aligned_cols=133 Identities=18% Similarity=0.233 Sum_probs=85.9
Q ss_pred HHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc-CccEEEEeC-CCCcccccc---cccccccccc---cccchhhhc
Q psy4394 154 AWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY-QVGAVILHS-PLMSGMRVA---FPRTKRTWFF---DVFPRVIFA 225 (286)
Q Consensus 154 ~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-~i~~~v~~~-p~~~~~~~~---~~~~~~~~~~---~~~~~~~~~ 225 (286)
+-+++++..+++.+++++.|.|==|..+...|... +|++++-+. ++.+....+ +......|-. +.+..-+..
T Consensus 159 vq~~~~~~~~~~i~~FvV~GaSKRGWTtWltaa~D~RV~aivP~Vid~LN~~~~l~h~y~~yG~~ws~a~~dY~~~gi~~ 238 (367)
T PF10142_consen 159 VQEFLKKKFGVNIEKFVVTGASKRGWTTWLTAAVDPRVKAIVPIVIDVLNMKANLEHQYRSYGGNWSFAFQDYYNEGITQ 238 (367)
T ss_pred HHHHHHhhcCCCccEEEEeCCchHhHHHHHhhccCcceeEEeeEEEccCCcHHHHHHHHHHhCCCCccchhhhhHhCchh
Confidence 33444444566778999999999999999999876 888877653 233321111 1111111111 111111111
Q ss_pred ccccc--cccCCccccCCCCCCCCCCEEEEecCCCCccChhHHHHHHHHCCCCCCceEecCCC
Q psy4394 226 NVKTP--IMGLSTLENIDKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPRPVEPLWVEGLS 286 (286)
Q Consensus 226 ~~~~~--~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~ga~ 286 (286)
....+ ...+...++..+..++++|-++|.|..|+...+..+.-.++.+++.|.+..+|+++
T Consensus 239 ~l~tp~f~~L~~ivDP~~Y~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G~K~lr~vPN~~ 301 (367)
T PF10142_consen 239 QLDTPEFDKLMQIVDPYSYRDRLTMPKYIINATGDEFFVPDSSNFYYDKLPGEKYLRYVPNAG 301 (367)
T ss_pred hcCCHHHHHHHHhcCHHHHHHhcCccEEEEecCCCceeccCchHHHHhhCCCCeeEEeCCCCC
Confidence 11111 01123445777778889999999999999999999999999999999999999875
No 170
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.04 E-value=0.00014 Score=63.29 Aligned_cols=70 Identities=19% Similarity=0.260 Sum_probs=44.3
Q ss_pred ccceeEEEeeccCcCCCCccCCCCCCChhhHHHHH----HHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc--Cc
Q psy4394 117 RINCNIFSYDYSGYDYSGYGISTGRPSEKNLYADI----DAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY--QV 190 (286)
Q Consensus 117 ~~g~~vi~~d~~~~~~~G~G~s~~~~~~~~~~~d~----~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i 190 (286)
+.|+-|+.+.+ ...+.+ ...++|+ .+.++.+.+... +..+..|+|-++||..++.+|+.. .+
T Consensus 98 ~~GHPvYFV~F---------~p~P~p--gQTl~DV~~ae~~Fv~~V~~~hp-~~~kp~liGnCQgGWa~~mlAA~~Pd~~ 165 (581)
T PF11339_consen 98 RAGHPVYFVGF---------FPEPEP--GQTLEDVMRAEAAFVEEVAERHP-DAPKPNLIGNCQGGWAAMMLAALRPDLV 165 (581)
T ss_pred HcCCCeEEEEe---------cCCCCC--CCcHHHHHHHHHHHHHHHHHhCC-CCCCceEEeccHHHHHHHHHHhcCcCcc
Confidence 34889888888 222222 2233444 344444444433 223899999999999999999988 55
Q ss_pred cEEEEeCC
Q psy4394 191 GAVILHSP 198 (286)
Q Consensus 191 ~~~v~~~p 198 (286)
.-+|+.+.
T Consensus 166 gplvlaGa 173 (581)
T PF11339_consen 166 GPLVLAGA 173 (581)
T ss_pred CceeecCC
Confidence 55555543
No 171
>KOG1516|consensus
Probab=97.99 E-value=2.1e-05 Score=71.71 Aligned_cols=106 Identities=17% Similarity=0.180 Sum_probs=67.2
Q ss_pred CeEEEEecCCccccch---h-hHHHHhhccccceeEEEeecc-CcCCCCccCCCCCCC-hhhHHHHHHHHHHHHHHH---
Q psy4394 91 RFTILFSHGNAVDIGQ---M-SSFFTGLGSRINCNIFSYDYS-GYDYSGYGISTGRPS-EKNLYADIDAAWNTLRTR--- 161 (286)
Q Consensus 91 ~p~vv~~HG~~~~~~~---~-~~~~~~l~~~~g~~vi~~d~~-~~~~~G~G~s~~~~~-~~~~~~d~~~~~~~l~~~--- 161 (286)
.|++|++||++-..+. + ......+.......|+.+.|| |. -|+........ -.-...|...+++|++++
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~--lGF~st~d~~~~gN~gl~Dq~~AL~wv~~~I~~ 189 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGP--LGFLSTGDSAAPGNLGLFDQLLALRWVKDNIPS 189 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEeccccee--ceeeecCCCCCCCcccHHHHHHHHHHHHHHHHh
Confidence 7999999998753322 1 112222333336888899994 22 24332221111 122246999999999987
Q ss_pred hCCCCCcEEEEEeecChHHHHHHHhhc----CccEEEEeCC
Q psy4394 162 YGISPENIILYGQSIGTVPTIDLASRY----QVGAVILHSP 198 (286)
Q Consensus 162 ~~~~~~~i~l~G~S~Gg~~a~~~a~~~----~i~~~v~~~p 198 (286)
+|-|+++|.|+|||.||..+..+.... .+..+|.+|+
T Consensus 190 FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG 230 (545)
T KOG1516|consen 190 FGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSG 230 (545)
T ss_pred cCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhcc
Confidence 466899999999999998887665432 5555565554
No 172
>KOG2183|consensus
Probab=97.98 E-value=2.7e-05 Score=65.60 Aligned_cols=104 Identities=21% Similarity=0.272 Sum_probs=79.3
Q ss_pred eEEEEecCCccccchhh---HHHHhhccccceeEEEeeccCcCCCCccCCCCC-------------CChhhHHHHHHHHH
Q psy4394 92 FTILFSHGNAVDIGQMS---SFFTGLGSRINCNIFSYDYSGYDYSGYGISTGR-------------PSEKNLYADIDAAW 155 (286)
Q Consensus 92 p~vv~~HG~~~~~~~~~---~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~-------------~~~~~~~~d~~~~~ 155 (286)
..|++.-|+-++.+.+. .++..++.+.+..++..+. |=+|+|.+- .+.+....|...++
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~~AllVFaEH-----RyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll 155 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMWDLAPELKALLVFAEH-----RYYGESLPFGSQSYKDARHLGYLTSEQALADFAELL 155 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHHhhhHhhCceEEEeeh-----hccccCCCCcchhccChhhhccccHHHHHHHHHHHH
Confidence 55888889887765543 4666777777889999999 999988643 12355568999999
Q ss_pred HHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc--Ccc-EEEEeCCCC
Q psy4394 156 NTLRTRYGISPENIILYGQSIGTVPTIDLASRY--QVG-AVILHSPLM 200 (286)
Q Consensus 156 ~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~-~~v~~~p~~ 200 (286)
.+++..++-...+++.+|.|+||++|.++=.++ -+. ++...+|+.
T Consensus 156 ~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAPvl 203 (492)
T KOG2183|consen 156 TFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAPVL 203 (492)
T ss_pred HHHhhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCceE
Confidence 999999877778999999999999999998888 333 444445543
No 173
>KOG3724|consensus
Probab=97.94 E-value=4.6e-05 Score=69.04 Aligned_cols=103 Identities=19% Similarity=0.225 Sum_probs=63.8
Q ss_pred CeEEEEecCCccccchhhHHHHhhcc---------------ccceeEEEeeccCcCCCCccCCCCCCChhhHHHHHHHHH
Q psy4394 91 RFTILFSHGNAVDIGQMSSFFTGLGS---------------RINCNIFSYDYSGYDYSGYGISTGRPSEKNLYADIDAAW 155 (286)
Q Consensus 91 ~p~vv~~HG~~~~~~~~~~~~~~l~~---------------~~g~~vi~~d~~~~~~~G~G~s~~~~~~~~~~~d~~~~~ 155 (286)
.-.|+|++|++|+..+.+........ ...++.+++|+ -+-=-.-.-....+..+.+.+++
T Consensus 89 GIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDF-----nEe~tAm~G~~l~dQtEYV~dAI 163 (973)
T KOG3724|consen 89 GIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDF-----NEEFTAMHGHILLDQTEYVNDAI 163 (973)
T ss_pred CceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcc-----cchhhhhccHhHHHHHHHHHHHH
Confidence 34699999999987665544433221 11467777777 21000000012244456777888
Q ss_pred HHHHHHhCC----C---CCcEEEEEeecChHHHHHHHhhc-----CccEEEEeCC
Q psy4394 156 NTLRTRYGI----S---PENIILYGQSIGTVPTIDLASRY-----QVGAVILHSP 198 (286)
Q Consensus 156 ~~l~~~~~~----~---~~~i~l~G~S~Gg~~a~~~a~~~-----~i~~~v~~~p 198 (286)
.++.+.+.- + |..|+++||||||.+|..++... .|.-++..+.
T Consensus 164 k~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlss 218 (973)
T KOG3724|consen 164 KYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSS 218 (973)
T ss_pred HHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcC
Confidence 888877642 2 45699999999999998877643 5555565543
No 174
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=97.92 E-value=0.00015 Score=63.71 Aligned_cols=123 Identities=16% Similarity=0.184 Sum_probs=74.2
Q ss_pred CCCEEEEEEEeec--CCCCeEEEEecCCccccchhhHHHHh---hcc--------------ccceeEEEeeccCcCCCCc
Q psy4394 75 RGNRLACMFMKCS--PNARFTILFSHGNAVDIGQMSSFFTG---LGS--------------RINCNIFSYDYSGYDYSGY 135 (286)
Q Consensus 75 ~g~~l~~~~~~~~--~~~~p~vv~~HG~~~~~~~~~~~~~~---l~~--------------~~g~~vi~~d~~~~~~~G~ 135 (286)
.+..+.+|+++.. ++..|+||++.|+++.++.+..+.+. ... ..-.+++-+|. +-|.
T Consensus 22 ~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~an~l~iD~----PvGt 97 (415)
T PF00450_consen 22 ENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNKFANLLFIDQ----PVGT 97 (415)
T ss_dssp TTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGGTSEEEEE------STTS
T ss_pred CCcEEEEEEEEeCCCCCCccEEEEecCCceeccccccccccCceEEeecccccccccccccccccceEEEee----cCce
Confidence 5678899998774 45789999999998876554322110 000 11378888995 1488
Q ss_pred cCCCCCC------ChhhHHHHHHHHHHHHHHHh-CCCCCcEEEEEeecChHHHHHHHhhc------------CccEEEEe
Q psy4394 136 GISTGRP------SEKNLYADIDAAWNTLRTRY-GISPENIILYGQSIGTVPTIDLASRY------------QVGAVILH 196 (286)
Q Consensus 136 G~s~~~~------~~~~~~~d~~~~~~~l~~~~-~~~~~~i~l~G~S~Gg~~a~~~a~~~------------~i~~~v~~ 196 (286)
|.|-... +.....+|+..+++.+..++ .....+++|.|-|+||..+-.+|... .++++++.
T Consensus 98 GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IG 177 (415)
T PF00450_consen 98 GFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIG 177 (415)
T ss_dssp TT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEE
T ss_pred EEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccceec
Confidence 8775432 23344455555554444443 35556999999999997766655432 47899999
Q ss_pred CCCCc
Q psy4394 197 SPLMS 201 (286)
Q Consensus 197 ~p~~~ 201 (286)
+|+++
T Consensus 178 ng~~d 182 (415)
T PF00450_consen 178 NGWID 182 (415)
T ss_dssp SE-SB
T ss_pred Ccccc
Confidence 99876
No 175
>KOG4388|consensus
Probab=97.86 E-value=4.3e-05 Score=66.97 Aligned_cols=112 Identities=21% Similarity=0.262 Sum_probs=79.0
Q ss_pred EEEEEEEeecCCCCeEEEEecCCcccc---chhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCCChhhHHHHHHHH
Q psy4394 78 RLACMFMKCSPNARFTILFSHGNAVDI---GQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSEKNLYADIDAA 154 (286)
Q Consensus 78 ~l~~~~~~~~~~~~p~vv~~HG~~~~~---~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~~~~~~~d~~~~ 154 (286)
.+..|.- |.+..+-.|+.+||+|.-. ......++..++.+|.-|+.+|| .-.++..++...+++--+
T Consensus 384 ~~~~wh~-P~p~S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL~cPiiSVdY---------SLAPEaPFPRaleEv~fA 453 (880)
T KOG4388|consen 384 SLELWHR-PAPRSRSLIVHCHGGGFVAQSSKSHEPYLRSWAQALGCPIISVDY---------SLAPEAPFPRALEEVFFA 453 (880)
T ss_pred ccccCCC-CCCCCceEEEEecCCceeeeccccccHHHHHHHHHhCCCeEEeee---------ccCCCCCCCcHHHHHHHH
Confidence 3444433 3455677899999988533 23345566667777999999999 234455666777888888
Q ss_pred HHHHHHH---hCCCCCcEEEEEeecChHHHHHHHhh----c--CccEEEEeCCC
Q psy4394 155 WNTLRTR---YGISPENIILYGQSIGTVPTIDLASR----Y--QVGAVILHSPL 199 (286)
Q Consensus 155 ~~~l~~~---~~~~~~~i~l~G~S~Gg~~a~~~a~~----~--~i~~~v~~~p~ 199 (286)
.-|+.++ .|...+||++.|.|.||.+.+-++.+ . .-+|+++..|.
T Consensus 454 YcW~inn~allG~TgEriv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~p 507 (880)
T KOG4388|consen 454 YCWAINNCALLGSTGERIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPP 507 (880)
T ss_pred HHHHhcCHHHhCcccceEEEeccCCCcceeehhHHHHHHhCCCCCCceEEecCh
Confidence 9999876 46778899999999999766555443 3 44788887553
No 176
>KOG4840|consensus
Probab=97.82 E-value=6.8e-05 Score=57.99 Aligned_cols=104 Identities=15% Similarity=0.260 Sum_probs=71.4
Q ss_pred CeEEEEecCCcccc--chhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCCChhhHHHHHHHHHHHHHHHhCCCCCc
Q psy4394 91 RFTILFSHGNAVDI--GQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSEKNLYADIDAAWNTLRTRYGISPEN 168 (286)
Q Consensus 91 ~p~vv~~HG~~~~~--~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~ 168 (286)
+-.|||+.|.+... -.+...+.....+.+|..+-+..+ +.+-|+|.++ ...-.+|+..+++++..... .+.
T Consensus 36 ~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~-Ssy~G~Gt~s----lk~D~edl~~l~~Hi~~~~f--St~ 108 (299)
T KOG4840|consen 36 SVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLR-SSYNGYGTFS----LKDDVEDLKCLLEHIQLCGF--STD 108 (299)
T ss_pred EEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeecc-cccccccccc----ccccHHHHHHHHHHhhccCc--ccc
Confidence 35688888876533 234444444455679999998872 1224555443 34456788888887765532 349
Q ss_pred EEEEEeecChHHHHHHHhhc----CccEEEEeCCCCc
Q psy4394 169 IILYGQSIGTVPTIDLASRY----QVGAVILHSPLMS 201 (286)
Q Consensus 169 i~l~G~S~Gg~~a~~~a~~~----~i~~~v~~~p~~~ 201 (286)
|+|+|||.|..=.+.+..+. .+++.|+.+|+.|
T Consensus 109 vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSD 145 (299)
T KOG4840|consen 109 VVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSD 145 (299)
T ss_pred eEEEecCccchHHHHHHHhccchHHHHHHHHhCccch
Confidence 99999999998877777543 7888899999887
No 177
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=97.74 E-value=0.00016 Score=61.47 Aligned_cols=101 Identities=18% Similarity=0.229 Sum_probs=66.7
Q ss_pred CeEEEEecCCccccchhhHHHHhhcccccee---EEEeeccCcCCCCccCCCCCCChhhHHHHHHHHHHHHHHHhCCCCC
Q psy4394 91 RFTILFSHGNAVDIGQMSSFFTGLGSRINCN---IFSYDYSGYDYSGYGISTGRPSEKNLYADIDAAWNTLRTRYGISPE 167 (286)
Q Consensus 91 ~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~---vi~~d~~~~~~~G~G~s~~~~~~~~~~~d~~~~~~~l~~~~~~~~~ 167 (286)
.-.++++||.+.+...+......+. ..|+. +..+++ ++. ..........+-+.+.++.+..+.+ .+
T Consensus 59 ~~pivlVhG~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~-----~~~---~~~~~~~~~~~ql~~~V~~~l~~~g--a~ 127 (336)
T COG1075 59 KEPIVLVHGLGGGYGNFLPLDYRLA-ILGWLTNGVYAFEL-----SGG---DGTYSLAVRGEQLFAYVDEVLAKTG--AK 127 (336)
T ss_pred CceEEEEccCcCCcchhhhhhhhhc-chHHHhcccccccc-----ccc---CCCccccccHHHHHHHHHHHHhhcC--CC
Confidence 4479999998776666666555544 44777 888888 543 1111222222344444444444444 35
Q ss_pred cEEEEEeecChHHHHHHHhhc----CccEEEEeCCCCcc
Q psy4394 168 NIILYGQSIGTVPTIDLASRY----QVGAVILHSPLMSG 202 (286)
Q Consensus 168 ~i~l~G~S~Gg~~a~~~a~~~----~i~~~v~~~p~~~~ 202 (286)
++.++|||+||.++..++... .++.++.+++.-.+
T Consensus 128 ~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~G 166 (336)
T COG1075 128 KVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTPHHG 166 (336)
T ss_pred ceEEEeecccchhhHHHHhhcCccceEEEEEEeccCCCC
Confidence 999999999999999887776 68899998876543
No 178
>KOG2541|consensus
Probab=97.65 E-value=0.00083 Score=53.67 Aligned_cols=100 Identities=16% Similarity=0.180 Sum_probs=64.4
Q ss_pred eEEEEecCCccccch--hhHHHHhhccccceeEEEeeccCcCCCCccCCCCCCChhhHHHHHHHHHHHHHHHhCCCCCcE
Q psy4394 92 FTILFSHGNAVDIGQ--MSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSEKNLYADIDAAWNTLRTRYGISPENI 169 (286)
Q Consensus 92 p~vv~~HG~~~~~~~--~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i 169 (286)
-.+|++||.+.+... +..+.+.+.+..|..|.+.|. |.| ..........+.+..+-+.++....+ ++-+
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei------g~g--~~~s~l~pl~~Qv~~~ce~v~~m~~l-sqGy 94 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI------GDG--IKDSSLMPLWEQVDVACEKVKQMPEL-SQGY 94 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe------cCC--cchhhhccHHHHHHHHHHHHhcchhc-cCce
Confidence 348889998876544 555555555445899999997 333 11222223334444555555543332 4579
Q ss_pred EEEEeecChHHHHHHHhhc---CccEEEEeCCCC
Q psy4394 170 ILYGQSIGTVPTIDLASRY---QVGAVILHSPLM 200 (286)
Q Consensus 170 ~l~G~S~Gg~~a~~~a~~~---~i~~~v~~~p~~ 200 (286)
.++|.|+||.++-.++..- .++..|.+++..
T Consensus 95 nivg~SQGglv~Raliq~cd~ppV~n~ISL~gPh 128 (296)
T KOG2541|consen 95 NIVGYSQGGLVARALIQFCDNPPVKNFISLGGPH 128 (296)
T ss_pred EEEEEccccHHHHHHHHhCCCCCcceeEeccCCc
Confidence 9999999999988777754 888888886543
No 179
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=97.65 E-value=0.00054 Score=53.72 Aligned_cols=86 Identities=17% Similarity=0.229 Sum_probs=57.0
Q ss_pred cccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCCChhhHHHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHH
Q psy4394 102 VDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSEKNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPT 181 (286)
Q Consensus 102 ~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a 181 (286)
++...|..+...+.. .+.++.+|. +|++.+..... ..........+.+.+.. ...++.++|||+||.++
T Consensus 10 ~~~~~~~~~~~~l~~--~~~v~~~~~-----~g~~~~~~~~~--~~~~~~~~~~~~l~~~~--~~~~~~l~g~s~Gg~~a 78 (212)
T smart00824 10 SGPHEYARLAAALRG--RRDVSALPL-----PGFGPGEPLPA--SADALVEAQAEAVLRAA--GGRPFVLVGHSSGGLLA 78 (212)
T ss_pred CcHHHHHHHHHhcCC--CccEEEecC-----CCCCCCCCCCC--CHHHHHHHHHHHHHHhc--CCCCeEEEEECHHHHHH
Confidence 445567777777764 689999999 99986543322 22222233344444433 23589999999999999
Q ss_pred HHHHhhc-----CccEEEEeCC
Q psy4394 182 IDLASRY-----QVGAVILHSP 198 (286)
Q Consensus 182 ~~~a~~~-----~i~~~v~~~p 198 (286)
..++.+. .+.+++++.+
T Consensus 79 ~~~a~~l~~~~~~~~~l~~~~~ 100 (212)
T smart00824 79 HAVAARLEARGIPPAAVVLLDT 100 (212)
T ss_pred HHHHHHHHhCCCCCcEEEEEcc
Confidence 8888763 5778877754
No 180
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=97.64 E-value=0.0015 Score=52.53 Aligned_cols=47 Identities=23% Similarity=0.292 Sum_probs=39.2
Q ss_pred HHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc--CccEEEEeCCCC
Q psy4394 154 AWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY--QVGAVILHSPLM 200 (286)
Q Consensus 154 ~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~ 200 (286)
+.-|+.+.+.++.++..++|||+||.+++.....+ .+...+++||..
T Consensus 124 lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSl 172 (264)
T COG2819 124 LKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSL 172 (264)
T ss_pred hHHHHhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecchh
Confidence 34456666788888999999999999999988877 889999999854
No 181
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=97.62 E-value=0.0021 Score=52.49 Aligned_cols=121 Identities=13% Similarity=0.169 Sum_probs=71.6
Q ss_pred CCEEEEEEEeec---CCCCeEEEEecCCcccc-chhhHHHHhhccc---cceeEEEeeccCcCCCCccCCCC-CCChhhH
Q psy4394 76 GNRLACMFMKCS---PNARFTILFSHGNAVDI-GQMSSFFTGLGSR---INCNIFSYDYSGYDYSGYGISTG-RPSEKNL 147 (286)
Q Consensus 76 g~~l~~~~~~~~---~~~~p~vv~~HG~~~~~-~~~~~~~~~l~~~---~g~~vi~~d~~~~~~~G~G~s~~-~~~~~~~ 147 (286)
+..-..++++|+ ..+.|+++++||-.... ......+..+... ....++.+|+ --.-.... .......
T Consensus 80 ~~~~~vv~lppgy~~~~k~pvl~~~DG~~~~~~g~i~~~~dsli~~g~i~pai~vgid~-----~d~~~R~~~~~~n~~~ 154 (299)
T COG2382 80 SERRRVVYLPPGYNPLEKYPVLYLQDGQDWFRSGRIPRILDSLIAAGEIPPAILVGIDY-----IDVKKRREELHCNEAY 154 (299)
T ss_pred cceeEEEEeCCCCCccccccEEEEeccHHHHhcCChHHHHHHHHHcCCCCCceEEecCC-----CCHHHHHHHhcccHHH
Confidence 333444555542 34679999999943321 2222333433322 1567778887 21000000 0111222
Q ss_pred H-HHHHHHHHHHHHHhCC--CCCcEEEEEeecChHHHHHHHhhc--CccEEEEeCCCCc
Q psy4394 148 Y-ADIDAAWNTLRTRYGI--SPENIILYGQSIGTVPTIDLASRY--QVGAVILHSPLMS 201 (286)
Q Consensus 148 ~-~d~~~~~~~l~~~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~~ 201 (286)
. .-..+++=++.+.+.+ +.+.-+|+|.|+||.+++..+..+ .|..++..||...
T Consensus 155 ~~~L~~eLlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~ 213 (299)
T COG2382 155 WRFLAQELLPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFW 213 (299)
T ss_pred HHHHHHHhhhhhhccCcccccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCccc
Confidence 2 2235566777777643 345788999999999999999999 8899999998765
No 182
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=97.50 E-value=0.0018 Score=51.55 Aligned_cols=101 Identities=17% Similarity=0.245 Sum_probs=62.0
Q ss_pred CCCeEEEEecCCc---cccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCCChhhHHHHHHHHHHHHHHHhCCC
Q psy4394 89 NARFTILFSHGNA---VDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSEKNLYADIDAAWNTLRTRYGIS 165 (286)
Q Consensus 89 ~~~p~vv~~HG~~---~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~~~~~~~d~~~~~~~l~~~~~~~ 165 (286)
+++.+|=|+.|.- ...-.|+.+++.++++ ||.|++.-| .- |. +....-....+.....++.+.+..+++
T Consensus 15 ~P~gvihFiGGaf~ga~P~itYr~lLe~La~~-Gy~ViAtPy-----~~-tf-DH~~~A~~~~~~f~~~~~~L~~~~~~~ 86 (250)
T PF07082_consen 15 RPKGVIHFIGGAFVGAAPQITYRYLLERLADR-GYAVIATPY-----VV-TF-DHQAIAREVWERFERCLRALQKRGGLD 86 (250)
T ss_pred CCCEEEEEcCcceeccCcHHHHHHHHHHHHhC-CcEEEEEec-----CC-CC-cHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 4566666666632 2234678889999965 999999988 21 00 000011222344555666666654444
Q ss_pred C--CcEEEEEeecChHHHHHHHhhc--CccEEEEeC
Q psy4394 166 P--ENIILYGQSIGTVPTIDLASRY--QVGAVILHS 197 (286)
Q Consensus 166 ~--~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~ 197 (286)
. -+++-+|||+|+-+-+.+.... .-++-|++|
T Consensus 87 ~~~lP~~~vGHSlGcklhlLi~s~~~~~r~gniliS 122 (250)
T PF07082_consen 87 PAYLPVYGVGHSLGCKLHLLIGSLFDVERAGNILIS 122 (250)
T ss_pred cccCCeeeeecccchHHHHHHhhhccCcccceEEEe
Confidence 3 3788999999998888777665 435556654
No 183
>KOG1282|consensus
Probab=97.48 E-value=0.002 Score=56.40 Aligned_cols=125 Identities=17% Similarity=0.164 Sum_probs=80.1
Q ss_pred ccCCCEEEEEEEeec--CCCCeEEEEecCCccccchhhHHHHhhc----cc-------------cceeEEEeeccCcCCC
Q psy4394 73 TSRGNRLACMFMKCS--PNARFTILFSHGNAVDIGQMSSFFTGLG----SR-------------INCNIFSYDYSGYDYS 133 (286)
Q Consensus 73 ~~~g~~l~~~~~~~~--~~~~p~vv~~HG~~~~~~~~~~~~~~l~----~~-------------~g~~vi~~d~~~~~~~ 133 (286)
...+..+.+|+++.. +..+|+||++.|+++.+... ..+..+. .. .-.+++-+|- +-
T Consensus 53 ~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~-G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfLd~----Pv 127 (454)
T KOG1282|consen 53 ESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLG-GLFEENGPFRVKYNGKTLYLNPYSWNKEANILFLDQ----PV 127 (454)
T ss_pred CCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchh-hhhhhcCCeEEcCCCCcceeCCccccccccEEEEec----CC
Confidence 346889999999873 44579999999998866433 2222111 00 0245666666 34
Q ss_pred CccCCC--CC----CChhhHHHHH-HHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhh---------c---CccEEE
Q psy4394 134 GYGIST--GR----PSEKNLYADI-DAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASR---------Y---QVGAVI 194 (286)
Q Consensus 134 G~G~s~--~~----~~~~~~~~d~-~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~---------~---~i~~~v 194 (286)
|.|.|= .. .......+|. ..+.+|+.+......++++|.|-|++|...-.+|.+ . .++|++
T Consensus 128 GvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~~ 207 (454)
T KOG1282|consen 128 GVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGYA 207 (454)
T ss_pred cCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccceEEE
Confidence 666552 11 2334444554 455577776666667899999999999555444432 1 678999
Q ss_pred EeCCCCcc
Q psy4394 195 LHSPLMSG 202 (286)
Q Consensus 195 ~~~p~~~~ 202 (286)
+-+|.++.
T Consensus 208 IGNg~td~ 215 (454)
T KOG1282|consen 208 IGNGLTDP 215 (454)
T ss_pred ecCcccCc
Confidence 99998874
No 184
>PLN02209 serine carboxypeptidase
Probab=97.45 E-value=0.0025 Score=56.09 Aligned_cols=123 Identities=17% Similarity=0.206 Sum_probs=73.2
Q ss_pred CCCEEEEEEEeec--CCCCeEEEEecCCccccchhhHHHH----------------hh-----ccccceeEEEeeccCcC
Q psy4394 75 RGNRLACMFMKCS--PNARFTILFSHGNAVDIGQMSSFFT----------------GL-----GSRINCNIFSYDYSGYD 131 (286)
Q Consensus 75 ~g~~l~~~~~~~~--~~~~p~vv~~HG~~~~~~~~~~~~~----------------~l-----~~~~g~~vi~~d~~~~~ 131 (286)
.+..+.+|+++.. +...|+|+++.|+++.+..+..+.+ .+ +-..-.+++-+|.
T Consensus 50 ~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDq---- 125 (437)
T PLN02209 50 ENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTANIIFLDQ---- 125 (437)
T ss_pred CCeEEEEEEEecCCCCCCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhhcCcEEEecC----
Confidence 4567888888763 3457999999999886644321110 00 0011367778884
Q ss_pred CCCccCCCCC-----CChhhHHHHHHHHHHHHHHHh-CCCCCcEEEEEeecChHHHHHHHhh-----------c-CccEE
Q psy4394 132 YSGYGISTGR-----PSEKNLYADIDAAWNTLRTRY-GISPENIILYGQSIGTVPTIDLASR-----------Y-QVGAV 193 (286)
Q Consensus 132 ~~G~G~s~~~-----~~~~~~~~d~~~~~~~l~~~~-~~~~~~i~l~G~S~Gg~~a~~~a~~-----------~-~i~~~ 193 (286)
+-|.|.|-.. .......+|+..+++...+.+ .....+++|.|.|+||..+-.+|.. . .++++
T Consensus 126 PvGtGfSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi 205 (437)
T PLN02209 126 PVGSGFSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGY 205 (437)
T ss_pred CCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeE
Confidence 2677776422 122222345544444333333 3445689999999999655444432 1 66899
Q ss_pred EEeCCCCc
Q psy4394 194 ILHSPLMS 201 (286)
Q Consensus 194 v~~~p~~~ 201 (286)
++.+|+++
T Consensus 206 ~igng~td 213 (437)
T PLN02209 206 VLGNPITH 213 (437)
T ss_pred EecCcccC
Confidence 99988775
No 185
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=97.43 E-value=0.0027 Score=55.84 Aligned_cols=123 Identities=15% Similarity=0.125 Sum_probs=73.1
Q ss_pred CCCEEEEEEEeec--CCCCeEEEEecCCccccchhhHHHH----------------hhc-----cccceeEEEeeccCcC
Q psy4394 75 RGNRLACMFMKCS--PNARFTILFSHGNAVDIGQMSSFFT----------------GLG-----SRINCNIFSYDYSGYD 131 (286)
Q Consensus 75 ~g~~l~~~~~~~~--~~~~p~vv~~HG~~~~~~~~~~~~~----------------~l~-----~~~g~~vi~~d~~~~~ 131 (286)
.+..+.+|+++.. +...|+|+++.|+++.+.....+.+ .+. -..-.+++-+|.
T Consensus 48 ~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDq---- 123 (433)
T PLN03016 48 ENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKMANIIFLDQ---- 123 (433)
T ss_pred CCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhcCcEEEecC----
Confidence 3567888888763 3457999999999886643211110 010 011367888884
Q ss_pred CCCccCCCCCC-----ChhhHHHHHHHHHH-HHHHHhCCCCCcEEEEEeecChHHHHHHHhh-----------c-CccEE
Q psy4394 132 YSGYGISTGRP-----SEKNLYADIDAAWN-TLRTRYGISPENIILYGQSIGTVPTIDLASR-----------Y-QVGAV 193 (286)
Q Consensus 132 ~~G~G~s~~~~-----~~~~~~~d~~~~~~-~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~-----------~-~i~~~ 193 (286)
+-|.|.|-... ......+|+..+++ |+.....+...+++|.|.|+||..+-.+|.. . .++|+
T Consensus 124 PvGtGfSy~~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi 203 (433)
T PLN03016 124 PVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGY 203 (433)
T ss_pred CCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCcccceee
Confidence 26778774321 11122244444443 3333333455789999999999655444432 1 67899
Q ss_pred EEeCCCCc
Q psy4394 194 ILHSPLMS 201 (286)
Q Consensus 194 v~~~p~~~ 201 (286)
++.+|.++
T Consensus 204 ~iGNg~t~ 211 (433)
T PLN03016 204 MLGNPVTY 211 (433)
T ss_pred EecCCCcC
Confidence 99888765
No 186
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=97.36 E-value=0.0011 Score=53.74 Aligned_cols=173 Identities=14% Similarity=0.041 Sum_probs=83.7
Q ss_pred EEEecCCccccchhh-HHHHhhccccceeEEEeeccCcCCCCccCCCCCCChhhHHHHHHHHHHHHHHHhCCCCCcEEEE
Q psy4394 94 ILFSHGNAVDIGQMS-SFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSEKNLYADIDAAWNTLRTRYGISPENIILY 172 (286)
Q Consensus 94 vv~~HG~~~~~~~~~-~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~ 172 (286)
+|++=|+.+...... ....... +.|+.++.+-. +-....... .....-+..+++.+.+...-+..++.+-
T Consensus 2 lvvl~gW~gA~~~hl~KY~~~Y~-~~g~~il~~~~-----~~~~~~~~~---~~~~~~~~~l~~~l~~~~~~~~~~il~H 72 (240)
T PF05705_consen 2 LVVLLGWMGAKPKHLAKYSDLYQ-DPGFDILLVTS-----PPADFFWPS---KRLAPAADKLLELLSDSQSASPPPILFH 72 (240)
T ss_pred EEEEEeCCCCCHHHHHHHHHHHH-hcCCeEEEEeC-----CHHHHeeec---cchHHHHHHHHHHhhhhccCCCCCEEEE
Confidence 455556655443322 2333232 35999999866 322111111 2223334445555555432222389999
Q ss_pred EeecChHHHHHHHhh---------c---CccEEEEeCCCCcccc--------ccccccccccc--ccccchhhhccc---
Q psy4394 173 GQSIGTVPTIDLASR---------Y---QVGAVILHSPLMSGMR--------VAFPRTKRTWF--FDVFPRVIFANV--- 227 (286)
Q Consensus 173 G~S~Gg~~a~~~a~~---------~---~i~~~v~~~p~~~~~~--------~~~~~~~~~~~--~~~~~~~~~~~~--- 227 (286)
.+|.||...+..... . +++++|+.|......- ...+.....+. ...+........
T Consensus 73 ~FSnGG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (240)
T PF05705_consen 73 SFSNGGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGIPTYSSSARAFSAALPKSSPRWFVPLWPLLQFLLRLSIIS 152 (240)
T ss_pred EEECchHHHHHHHHHHHHhcccccccccccceeEEeCCCCccccccHHHHHHHHcCccchhhHHHHHHHHHHHHHHHHHH
Confidence 999988666554331 1 4899999876532110 00111100000 000000000000
Q ss_pred -----ccc-cccCCccccCCCCCCCCCCEEEEecCCCCccChhHHHHHHHHCCC
Q psy4394 228 -----KTP-IMGLSTLENIDKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPR 275 (286)
Q Consensus 228 -----~~~-~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~ 275 (286)
... .......-.........+|-|++.++.|.+++.++.++..+...+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~ 206 (240)
T PF05705_consen 153 YFIFGYPDVQEYYRRALNDFANSPSRCPRLYLYSKADPLIPWRDVEEHAEEARR 206 (240)
T ss_pred HHHhcCCcHHHHHHHHHhhhhcCCCCCCeEEecCCCCcCcCHHHHHHHHHHHHH
Confidence 000 000000001111223468999999999999999999888876544
No 187
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=97.32 E-value=0.00064 Score=42.24 Aligned_cols=45 Identities=16% Similarity=0.079 Sum_probs=27.7
Q ss_pred CccccEEEeccCCCEEEEEEEeecC------CCCeEEEEecCCccccchhh
Q psy4394 64 SNIEGFFTRTSRGNRLACMFMKCSP------NARFTILFSHGNAVDIGQMS 108 (286)
Q Consensus 64 ~~~~~~~~~~~~g~~l~~~~~~~~~------~~~p~vv~~HG~~~~~~~~~ 108 (286)
.+.|+..++|.||..|..+..++.. .++|+|++.||...++..|.
T Consensus 10 Y~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~wv 60 (63)
T PF04083_consen 10 YPCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDWV 60 (63)
T ss_dssp ---EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGGGC
T ss_pred CCcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHHHH
Confidence 3578889999999999988887643 36799999999988776663
No 188
>KOG2182|consensus
Probab=97.30 E-value=0.0021 Score=55.88 Aligned_cols=106 Identities=14% Similarity=0.197 Sum_probs=79.1
Q ss_pred CCCeEEEEecCCccccchh----hHHHHhhccccceeEEEeeccCcCCCCccCCCCCC----------ChhhHHHHHHHH
Q psy4394 89 NARFTILFSHGNAVDIGQM----SSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRP----------SEKNLYADIDAA 154 (286)
Q Consensus 89 ~~~p~vv~~HG~~~~~~~~----~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~----------~~~~~~~d~~~~ 154 (286)
...|+.|++.|-+.....| ...+..++++.|..|+..+. |-+|.|.+.. +....+.|+..+
T Consensus 84 ~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEH-----RFYG~S~P~~~~st~nlk~LSs~QALaDla~f 158 (514)
T KOG2182|consen 84 PGGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEH-----RFYGQSSPIGDLSTSNLKYLSSLQALADLAEF 158 (514)
T ss_pred CCCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeee-----eccccCCCCCCCcccchhhhhHHHHHHHHHHH
Confidence 4568888888865443223 23455667788999999999 9999886542 234556899999
Q ss_pred HHHHHHHhCCCCC-cEEEEEeecChHHHHHHHhhc--CccEEEEeCCC
Q psy4394 155 WNTLRTRYGISPE-NIILYGQSIGTVPTIDLASRY--QVGAVILHSPL 199 (286)
Q Consensus 155 ~~~l~~~~~~~~~-~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~ 199 (286)
++.+..+++...+ +++.+|.|+-|.++.++=..+ .+.|.|+.|..
T Consensus 159 I~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSap 206 (514)
T KOG2182|consen 159 IKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAP 206 (514)
T ss_pred HHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccccc
Confidence 9999998876544 999999999999999988887 56666666544
No 189
>PLN02633 palmitoyl protein thioesterase family protein
Probab=97.28 E-value=0.0042 Score=51.25 Aligned_cols=101 Identities=15% Similarity=0.133 Sum_probs=57.9
Q ss_pred eEEEEecCCccccch--hhHHHHhhccccceeEEEeeccCcCCCCccCCCCCCChhhHHHHHHHHHHHHHHHhCCCCCcE
Q psy4394 92 FTILFSHGNAVDIGQ--MSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSEKNLYADIDAAWNTLRTRYGISPENI 169 (286)
Q Consensus 92 p~vv~~HG~~~~~~~--~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i 169 (286)
..+|+.||.|.+... ...+.+.+....|.-+.++.. | .+....-.....+.+..+-+.+.+...+ .+-+
T Consensus 26 ~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i------g--~~~~~s~~~~~~~Qve~vce~l~~~~~l-~~G~ 96 (314)
T PLN02633 26 VPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI------G--NGVGDSWLMPLTQQAEIACEKVKQMKEL-SQGY 96 (314)
T ss_pred CCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE------C--CCccccceeCHHHHHHHHHHHHhhchhh-hCcE
Confidence 348889998865432 223333232223666767665 2 2111111122233344444444443222 2469
Q ss_pred EEEEeecChHHHHHHHhhc----CccEEEEeCCCCc
Q psy4394 170 ILYGQSIGTVPTIDLASRY----QVGAVILHSPLMS 201 (286)
Q Consensus 170 ~l~G~S~Gg~~a~~~a~~~----~i~~~v~~~p~~~ 201 (286)
.++|+|+||.++=.++.+. .++.+|.+++...
T Consensus 97 naIGfSQGGlflRa~ierc~~~p~V~nlISlggph~ 132 (314)
T PLN02633 97 NIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGPHA 132 (314)
T ss_pred EEEEEccchHHHHHHHHHCCCCCCcceEEEecCCCC
Confidence 9999999999988888775 4899999876543
No 190
>KOG1551|consensus
Probab=97.17 E-value=0.0026 Score=50.77 Aligned_cols=190 Identities=14% Similarity=0.102 Sum_probs=95.1
Q ss_pred CCCeEEEEecCCccccchhh-HHHHhhccccceeEEEeeccCcCCCCccCCCCCCChhhHH---HHH----HHHHHHHHH
Q psy4394 89 NARFTILFSHGNAVDIGQMS-SFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSEKNLY---ADI----DAAWNTLRT 160 (286)
Q Consensus 89 ~~~p~vv~~HG~~~~~~~~~-~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~~~~~~---~d~----~~~~~~l~~ 160 (286)
+..++-|.+-|.|.+...-+ -....+. +.+...+.++- +-||............ .|+ .+.++....
T Consensus 111 K~~~KOG~~a~tgdh~y~rr~~L~~p~~-k~~i~tmvle~-----pfYgqr~p~~q~~~~Le~vtDlf~mG~A~I~E~~~ 184 (371)
T KOG1551|consen 111 KMADLCLSWALTGDHVYTRRLVLSKPIN-KREIATMVLEK-----PFYGQRVPEEQIIHMLEYVTDLFKMGRATIQEFVK 184 (371)
T ss_pred CcCCeeEEEeecCCceeEeeeeecCchh-hhcchheeeec-----ccccccCCHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 44566666666655443322 2223343 33788888888 8888876553322222 222 223333333
Q ss_pred HhCCC----CCcEEEEEeecChHHHHHHHhhc--CccEEEEeCCCCccc---cccccc----ccc-----ccc--ccccc
Q psy4394 161 RYGIS----PENIILYGQSIGTVPTIDLASRY--QVGAVILHSPLMSGM---RVAFPR----TKR-----TWF--FDVFP 220 (286)
Q Consensus 161 ~~~~~----~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~~~~---~~~~~~----~~~-----~~~--~~~~~ 220 (286)
.+..+ -.++.++|.||||.+|..+.+.+ .|.-+=++++-.... +..... +.. .|. ....+
T Consensus 185 lf~Ws~~~g~g~~~~~g~Smgg~~a~~vgS~~q~Pva~~p~l~~~~asvs~teg~l~~~~s~~~~~~~~t~~~~~~~r~p 264 (371)
T KOG1551|consen 185 LFTWSSADGLGNLNLVGRSMGGDIANQVGSLHQKPVATAPCLNSSKASVSATEGLLLQDTSKMKRFNQTTNKSGYTSRNP 264 (371)
T ss_pred hcccccccCcccceeeeeecccHHHHhhcccCCCCccccccccccccchhhhhhhhhhhhHHHHhhccCcchhhhhhhCc
Confidence 33211 24899999999999999998866 433332332211100 000000 000 000 00000
Q ss_pred -hhhhccc---cccc--cc---C-CccccCCCCCCCCCC-----EEEEecCCCCccChhHHHHHHHHCCCCCCceEecCC
Q psy4394 221 -RVIFANV---KTPI--MG---L-STLENIDKVPKVTSP-----VLVIHGTEDEVIDLSHGIAIYERCPRPVEPLWVEGL 285 (286)
Q Consensus 221 -~~~~~~~---~~~~--~~---~-~~~~~~~~~~~i~~P-----vlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~ga 285 (286)
+.+.... ..+. .. + .-++....+.+..+| +.++.+++|..||-.....+.+.+++. ++.+++|+
T Consensus 265 ~Q~~~~~~~~~srn~~~E~~~~Mr~vmd~~T~v~~fp~Pvdpsl~ivv~A~~D~Yipr~gv~~lQ~~WPg~-eVr~~egG 343 (371)
T KOG1551|consen 265 AQSYHLLSKEQSRNSRKESLIFMRGVMDECTHVANFPVPVDPSLIIVVQAKEDAYIPRTGVRSLQEIWPGC-EVRYLEGG 343 (371)
T ss_pred hhhHHHHHHHhhhcchHHHHHHHHHHHHhhchhhcCCCCCCCCeEEEEEecCCccccccCcHHHHHhCCCC-EEEEeecC
Confidence 0000000 0000 00 0 011223334444444 577899999999998888999999887 77777754
No 191
>KOG3967|consensus
Probab=97.08 E-value=0.0063 Score=47.04 Aligned_cols=103 Identities=17% Similarity=0.239 Sum_probs=58.7
Q ss_pred CCCeEEEEecCCcccc-chhh---------------HHHHhhccccceeEEEeeccCcCCCCccCCC--CCCChhhHHHH
Q psy4394 89 NARFTILFSHGNAVDI-GQMS---------------SFFTGLGSRINCNIFSYDYSGYDYSGYGIST--GRPSEKNLYAD 150 (286)
Q Consensus 89 ~~~p~vv~~HG~~~~~-~~~~---------------~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~--~~~~~~~~~~d 150 (286)
+++.++|++||.|.-. ++|. +++.... ..||.|+..+-- +-|-+-.+. +........+.
T Consensus 99 ~~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv-~~Gygviv~N~N--~~~kfye~k~np~kyirt~veh 175 (297)
T KOG3967|consen 99 NPQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAV-AEGYGVIVLNPN--RERKFYEKKRNPQKYIRTPVEH 175 (297)
T ss_pred CccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHH-HcCCcEEEeCCc--hhhhhhhcccCcchhccchHHH
Confidence 4567899999976422 2222 3344333 459999988750 000011111 11111222344
Q ss_pred HHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc----CccEEEEe
Q psy4394 151 IDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY----QVGAVILH 196 (286)
Q Consensus 151 ~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~----~i~~~v~~ 196 (286)
+..+..++.... .+..++++.||+||..++.+..+. +|.++.+.
T Consensus 176 ~~yvw~~~v~pa--~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialT 223 (297)
T KOG3967|consen 176 AKYVWKNIVLPA--KAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALT 223 (297)
T ss_pred HHHHHHHHhccc--CcceEEEEEeccCChhHHHHHHhcCCccceEEEEee
Confidence 444444444432 456999999999999999999887 55555543
No 192
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=96.98 E-value=0.0018 Score=52.81 Aligned_cols=102 Identities=15% Similarity=0.123 Sum_probs=47.6
Q ss_pred CCeEEEEecCCccccc---hhh---HHHHhhccccceeEEEeeccCcCCCCccCCCC-CCC-hhhHHHHHHHHHHHHHHH
Q psy4394 90 ARFTILFSHGNAVDIG---QMS---SFFTGLGSRINCNIFSYDYSGYDYSGYGISTG-RPS-EKNLYADIDAAWNTLRTR 161 (286)
Q Consensus 90 ~~p~vv~~HG~~~~~~---~~~---~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~-~~~-~~~~~~d~~~~~~~l~~~ 161 (286)
+...||+.||.|.+.. .+. .+++... -|.-|..++. |.+.++. ..+ ...+.+.+..+-+.+.+.
T Consensus 4 ~~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~--PG~yV~si~i------g~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~ 75 (279)
T PF02089_consen 4 SPLPVVIWHGMGDSCCNPSSMGSIKELIEEQH--PGTYVHSIEI------GNDPSEDVENSFFGNVNDQVEQVCEQLAND 75 (279)
T ss_dssp SS--EEEE--TT--S--TTTHHHHHHHHHHHS--TT--EEE--S------SSSHHHHHHHHHHSHHHHHHHHHHHHHHH-
T ss_pred CCCcEEEEEcCccccCChhHHHHHHHHHHHhC--CCceEEEEEE------CCCcchhhhhhHHHHHHHHHHHHHHHHhhC
Confidence 3445899999886431 222 2333322 2777888876 1111100 011 111223333444444444
Q ss_pred hCCCCCcEEEEEeecChHHHHHHHhhc---CccEEEEeCCCC
Q psy4394 162 YGISPENIILYGQSIGTVPTIDLASRY---QVGAVILHSPLM 200 (286)
Q Consensus 162 ~~~~~~~i~l~G~S~Gg~~a~~~a~~~---~i~~~v~~~p~~ 200 (286)
..+. +-+.++|+|+||.++=.++.+. .|+.+|.+++..
T Consensus 76 p~L~-~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph 116 (279)
T PF02089_consen 76 PELA-NGFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPH 116 (279)
T ss_dssp GGGT-T-EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--T
T ss_pred hhhh-cceeeeeeccccHHHHHHHHHCCCCCceeEEEecCcc
Confidence 3332 4799999999999988888876 899999987543
No 193
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=96.95 E-value=0.09 Score=40.19 Aligned_cols=52 Identities=23% Similarity=0.213 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc--CccEEEEe-CCCC
Q psy4394 148 YADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY--QVGAVILH-SPLM 200 (286)
Q Consensus 148 ~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~-~p~~ 200 (286)
..++..+++-|.... -+..++.++|||+|+.++-..+.+. .++.+|++ ||-.
T Consensus 91 a~~L~~f~~gl~a~~-~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~ 145 (177)
T PF06259_consen 91 APRLARFLDGLRATH-GPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGM 145 (177)
T ss_pred HHHHHHHHHHhhhhc-CCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCCC
Confidence 356777777777665 2456999999999999998888773 77777776 4433
No 194
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=96.93 E-value=0.0018 Score=50.47 Aligned_cols=40 Identities=28% Similarity=0.468 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc
Q psy4394 148 YADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY 188 (286)
Q Consensus 148 ~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 188 (286)
..|+.++.++..++.+ +..+|+|+|||+|+.+...+..++
T Consensus 77 y~DV~~AF~~yL~~~n-~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 77 YSDVRAAFDYYLANYN-NGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred HHHHHHHHHHHHHhcC-CCCCEEEEEeChHHHHHHHHHHHH
Confidence 5899999999988876 456999999999999999998765
No 195
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=96.88 E-value=0.0064 Score=52.90 Aligned_cols=82 Identities=10% Similarity=0.212 Sum_probs=54.3
Q ss_pred hhhHHHHhhccccceeE------EEeeccCcCCCCccCCCCCCChhhHHHHHHHHHHHHHHHhCCCCCcEEEEEeecChH
Q psy4394 106 QMSSFFTGLGSRINCNI------FSYDYSGYDYSGYGISTGRPSEKNLYADIDAAWNTLRTRYGISPENIILYGQSIGTV 179 (286)
Q Consensus 106 ~~~~~~~~l~~~~g~~v------i~~d~~~~~~~G~G~s~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~ 179 (286)
.|..+++.|. +.||.. .-+|+ |- +.. ........+...++.+.+. ..++++|+||||||.
T Consensus 66 ~~~~li~~L~-~~GY~~~~~l~~~pYDW-----R~---~~~--~~~~~~~~lk~~ie~~~~~---~~~kv~li~HSmGgl 131 (389)
T PF02450_consen 66 YFAKLIENLE-KLGYDRGKDLFAAPYDW-----RL---SPA--ERDEYFTKLKQLIEEAYKK---NGKKVVLIAHSMGGL 131 (389)
T ss_pred hHHHHHHHHH-hcCcccCCEEEEEeech-----hh---chh--hHHHHHHHHHHHHHHHHHh---cCCcEEEEEeCCCch
Confidence 5667777776 446543 22677 41 111 2335556677777776655 356999999999999
Q ss_pred HHHHHHhhc--------CccEEEEeCCCCc
Q psy4394 180 PTIDLASRY--------QVGAVILHSPLMS 201 (286)
Q Consensus 180 ~a~~~a~~~--------~i~~~v~~~p~~~ 201 (286)
++..+.... .|+++|.+++...
T Consensus 132 ~~~~fl~~~~~~~W~~~~i~~~i~i~~p~~ 161 (389)
T PF02450_consen 132 VARYFLQWMPQEEWKDKYIKRFISIGTPFG 161 (389)
T ss_pred HHHHHHHhccchhhHHhhhhEEEEeCCCCC
Confidence 998876554 5899999987543
No 196
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=96.88 E-value=0.014 Score=50.86 Aligned_cols=118 Identities=16% Similarity=0.130 Sum_probs=81.8
Q ss_pred ccCCCEEEEEEEeecCCCCeEEEEecCCccccc-hhhHHHHhhccccceeEE-EeeccCcCCCCccCCCCCCChhhHHHH
Q psy4394 73 TSRGNRLACMFMKCSPNARFTILFSHGNAVDIG-QMSSFFTGLGSRINCNIF-SYDYSGYDYSGYGISTGRPSEKNLYAD 150 (286)
Q Consensus 73 ~~~g~~l~~~~~~~~~~~~p~vv~~HG~~~~~~-~~~~~~~~l~~~~g~~vi-~~d~~~~~~~G~G~s~~~~~~~~~~~d 150 (286)
.+.+.++.+++. |.+-+.|+.|++-|+-..-+ +....++.+ |.-.+ .-|. |=-|.+-- .......+.
T Consensus 272 D~~reEi~yYFn-PGD~KPPL~VYFSGyR~aEGFEgy~MMk~L----g~PfLL~~Dp-----RleGGaFY-lGs~eyE~~ 340 (511)
T TIGR03712 272 DSKRQEFIYYFN-PGDFKPPLNVYFSGYRPAEGFEGYFMMKRL----GAPFLLIGDP-----RLEGGAFY-LGSDEYEQG 340 (511)
T ss_pred cCCCCeeEEecC-CcCCCCCeEEeeccCcccCcchhHHHHHhc----CCCeEEeecc-----ccccceee-eCcHHHHHH
Confidence 445556655544 45567799999999765222 233445544 33333 3455 65554321 122344567
Q ss_pred HHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhcCccEEEEeCCCCc
Q psy4394 151 IDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRYQVGAVILHSPLMS 201 (286)
Q Consensus 151 ~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~i~~~v~~~p~~~ 201 (286)
+..+++.-.+.++.+.+.++|-|-|||.+-|+.++++....|+|+.-|.++
T Consensus 341 I~~~I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l~P~AIiVgKPL~N 391 (511)
T TIGR03712 341 IINVIQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKLSPHAIIVGKPLVN 391 (511)
T ss_pred HHHHHHHHHHHhCCCHHHeeeccccccchhhhhhcccCCCceEEEcCcccc
Confidence 777888777888999999999999999999999999998899999888876
No 197
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.75 E-value=0.0051 Score=46.01 Aligned_cols=49 Identities=14% Similarity=0.091 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc------CccEEEEeCCC
Q psy4394 149 ADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY------QVGAVILHSPL 199 (286)
Q Consensus 149 ~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~------~i~~~v~~~p~ 199 (286)
..+...++....++ +..++.+.|||+||.+|..++... ....++..++.
T Consensus 12 ~~i~~~~~~~~~~~--p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p 66 (153)
T cd00741 12 NLVLPLLKSALAQY--PDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPP 66 (153)
T ss_pred HHHHHHHHHHHHHC--CCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCC
Confidence 44444454444433 356999999999999999988765 24455555543
No 198
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=96.74 E-value=0.0029 Score=43.88 Aligned_cols=39 Identities=31% Similarity=0.466 Sum_probs=35.8
Q ss_pred CCCEEEEecCCCCccChhHHHHHHHHCCCCCCceEecCCC
Q psy4394 247 TSPVLVIHGTEDEVIDLSHGIAIYERCPRPVEPLWVEGLS 286 (286)
Q Consensus 247 ~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~ga~ 286 (286)
..|+|++.++.|+.+|++.++++.+.+++. +++.++|.|
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~~s-~lvt~~g~g 72 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLPGS-RLVTVDGAG 72 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCCCc-eEEEEeccC
Confidence 589999999999999999999999999986 888888764
No 199
>PLN02606 palmitoyl-protein thioesterase
Probab=96.73 E-value=0.021 Score=47.12 Aligned_cols=100 Identities=15% Similarity=0.102 Sum_probs=57.6
Q ss_pred eEEEEecCCcc--ccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCCCh-hhHHHHHHHHHHHHHHHhCCCCCc
Q psy4394 92 FTILFSHGNAV--DIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSE-KNLYADIDAAWNTLRTRYGISPEN 168 (286)
Q Consensus 92 p~vv~~HG~~~--~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~~-~~~~~d~~~~~~~l~~~~~~~~~~ 168 (286)
..||+.||.+. +...+..+.+.+....|+-+..+.. |-+. ..+. ....+.+..+-+.+++...+ .+-
T Consensus 27 ~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~i------g~~~---~~s~~~~~~~Qv~~vce~l~~~~~L-~~G 96 (306)
T PLN02606 27 VPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVEI------GNGV---QDSLFMPLRQQASIACEKIKQMKEL-SEG 96 (306)
T ss_pred CCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEEE------CCCc---ccccccCHHHHHHHHHHHHhcchhh-cCc
Confidence 34889999983 3334444444332122555555543 1111 1122 23334444444555443222 246
Q ss_pred EEEEEeecChHHHHHHHhhc----CccEEEEeCCCCc
Q psy4394 169 IILYGQSIGTVPTIDLASRY----QVGAVILHSPLMS 201 (286)
Q Consensus 169 i~l~G~S~Gg~~a~~~a~~~----~i~~~v~~~p~~~ 201 (286)
+.++|+|+||.++=.++.+. .|+.+|.+++...
T Consensus 97 ~naIGfSQGglflRa~ierc~~~p~V~nlISlggph~ 133 (306)
T PLN02606 97 YNIVAESQGNLVARGLIEFCDNAPPVINYVSLGGPHA 133 (306)
T ss_pred eEEEEEcchhHHHHHHHHHCCCCCCcceEEEecCCcC
Confidence 99999999999988888875 4899999876543
No 200
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=96.63 E-value=0.0052 Score=48.97 Aligned_cols=47 Identities=21% Similarity=0.173 Sum_probs=31.5
Q ss_pred HHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc------CccEEEEe-CCC
Q psy4394 153 AAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY------QVGAVILH-SPL 199 (286)
Q Consensus 153 ~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~------~i~~~v~~-~p~ 199 (286)
.+++|+.+...-.++++.+.|||.||.+|..++... +|..+... +|-
T Consensus 70 ~A~~yl~~~~~~~~~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPG 123 (224)
T PF11187_consen 70 SALAYLKKIAKKYPGKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPG 123 (224)
T ss_pred HHHHHHHHHHHhCCCCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCC
Confidence 344444443221244799999999999999988762 67777755 453
No 201
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=96.62 E-value=0.0039 Score=45.72 Aligned_cols=39 Identities=26% Similarity=0.341 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc
Q psy4394 148 YADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY 188 (286)
Q Consensus 148 ~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 188 (286)
.+.+...++.+.++++ ..++.+.|||+||.+|..++...
T Consensus 47 ~~~~~~~l~~~~~~~~--~~~i~itGHSLGGalA~l~a~~l 85 (140)
T PF01764_consen 47 YDQILDALKELVEKYP--DYSIVITGHSLGGALASLAAADL 85 (140)
T ss_dssp HHHHHHHHHHHHHHST--TSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccc--CccchhhccchHHHHHHHHHHhh
Confidence 3455555555666654 36999999999999999888763
No 202
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=96.36 E-value=0.032 Score=42.93 Aligned_cols=49 Identities=24% Similarity=0.292 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhh--c------CccEEEEeCC
Q psy4394 148 YADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASR--Y------QVGAVILHSP 198 (286)
Q Consensus 148 ~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~--~------~i~~~v~~~p 198 (286)
..++...++....+- +..+++|+|+|+|+.++..++.. . +|.++++++-
T Consensus 64 ~~~~~~~i~~~~~~C--P~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGd 120 (179)
T PF01083_consen 64 VANLVRLIEEYAARC--PNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGD 120 (179)
T ss_dssp HHHHHHHHHHHHHHS--TTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-
T ss_pred HHHHHHHHHHHHHhC--CCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecC
Confidence 355555555555553 34599999999999999998877 1 8889888753
No 203
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=96.35 E-value=0.027 Score=47.94 Aligned_cols=96 Identities=17% Similarity=0.202 Sum_probs=65.4
Q ss_pred CEEEEEEEeecCC-CCeEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCCChhhHHHHHHHHH
Q psy4394 77 NRLACMFMKCSPN-ARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSEKNLYADIDAAW 155 (286)
Q Consensus 77 ~~l~~~~~~~~~~-~~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~~~~~~~d~~~~~ 155 (286)
..+....++.+++ ..-.-||+-|-|+....-......|. +.|+.|+.+|- --|=.+ +.+.+....|+..++
T Consensus 245 eaLPV~e~~a~~~~sd~~av~~SGDGGWr~lDk~v~~~l~-~~gvpVvGvds-----LRYfW~--~rtPe~~a~Dl~r~i 316 (456)
T COG3946 245 EALPVVEVPAKPGNSDTVAVFYSGDGGWRDLDKEVAEALQ-KQGVPVVGVDS-----LRYFWS--ERTPEQIAADLSRLI 316 (456)
T ss_pred CCCCceeeccCCCCcceEEEEEecCCchhhhhHHHHHHHH-HCCCceeeeeh-----hhhhhc--cCCHHHHHHHHHHHH
Confidence 4455555544333 45566777776665544445666666 45999999997 433333 345567789999999
Q ss_pred HHHHHHhCCCCCcEEEEEeecChHHHH
Q psy4394 156 NTLRTRYGISPENIILYGQSIGTVPTI 182 (286)
Q Consensus 156 ~~l~~~~~~~~~~i~l~G~S~Gg~~a~ 182 (286)
++-..+-+ ..++.|+|+|+|+-+--
T Consensus 317 ~~y~~~w~--~~~~~liGySfGADvlP 341 (456)
T COG3946 317 RFYARRWG--AKRVLLIGYSFGADVLP 341 (456)
T ss_pred HHHHHhhC--cceEEEEeecccchhhH
Confidence 99888765 45999999999996543
No 204
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=96.31 E-value=0.029 Score=49.23 Aligned_cols=117 Identities=14% Similarity=0.070 Sum_probs=70.7
Q ss_pred EEEEEEee--cCCCCeEEEEecCCccccchhhHHHHh----hcc-------------ccceeEEEeeccCcCCCCccCCC
Q psy4394 79 LACMFMKC--SPNARFTILFSHGNAVDIGQMSSFFTG----LGS-------------RINCNIFSYDYSGYDYSGYGIST 139 (286)
Q Consensus 79 l~~~~~~~--~~~~~p~vv~~HG~~~~~~~~~~~~~~----l~~-------------~~g~~vi~~d~~~~~~~G~G~s~ 139 (286)
..+|.+.+ .+.++|+++++.|+++.+..+..+.+- +.. ...-.++-+|. +-|.|.|.
T Consensus 87 ~ffy~fe~~ndp~~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDq----PvGTGfS~ 162 (498)
T COG2939 87 FFFYTFESPNDPANRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQ----PVGTGFSR 162 (498)
T ss_pred EEEEEecCCCCCCCCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccCCceEEEec----CcccCccc
Confidence 44555544 234689999999999877554433211 000 00246777773 16777765
Q ss_pred C-----CCChhhHHHHHHHHHHHHHHHh---CCCCCcEEEEEeecChHHHHHHHhhc-----CccEEEEeCCC
Q psy4394 140 G-----RPSEKNLYADIDAAWNTLRTRY---GISPENIILYGQSIGTVPTIDLASRY-----QVGAVILHSPL 199 (286)
Q Consensus 140 ~-----~~~~~~~~~d~~~~~~~l~~~~---~~~~~~i~l~G~S~Gg~~a~~~a~~~-----~i~~~v~~~p~ 199 (286)
. ..+....-+|+..+.+.+.+.+ .-...+.+|+|-|+||.-+..+|... ..++++.++++
T Consensus 163 a~~~e~~~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssv 235 (498)
T COG2939 163 ALGDEKKKDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSV 235 (498)
T ss_pred ccccccccchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeee
Confidence 3 2344555578877777666653 11124899999999998777776543 24566665544
No 205
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=96.25 E-value=0.0094 Score=46.81 Aligned_cols=78 Identities=23% Similarity=0.267 Sum_probs=48.2
Q ss_pred CCeEEEEecCCccccchhhHHHHhhcccccee-EEEeeccCcCCCCccCCCCCCChhhHHHHHHHHHHHHHHHhCCCCCc
Q psy4394 90 ARFTILFSHGNAVDIGQMSSFFTGLGSRINCN-IFSYDYSGYDYSGYGISTGRPSEKNLYADIDAAWNTLRTRYGISPEN 168 (286)
Q Consensus 90 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~-vi~~d~~~~~~~G~G~s~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~ 168 (286)
.+.+|||+.|+|.+...+. ++....++. ++++|| |..-. |. + + .. -++
T Consensus 10 ~~~LilfF~GWg~d~~~f~----hL~~~~~~D~l~~yDY-----r~l~~------------d~----~-~-~~----y~~ 58 (213)
T PF04301_consen 10 GKELILFFAGWGMDPSPFS----HLILPENYDVLICYDY-----RDLDF------------DF----D-L-SG----YRE 58 (213)
T ss_pred CCeEEEEEecCCCChHHhh----hccCCCCccEEEEecC-----ccccc------------cc----c-c-cc----Cce
Confidence 3579999999998765443 332111333 457788 42111 11 1 1 12 239
Q ss_pred EEEEEeecChHHHHHHHhhcCccEEEEeCC
Q psy4394 169 IILYGQSIGTVPTIDLASRYQVGAVILHSP 198 (286)
Q Consensus 169 i~l~G~S~Gg~~a~~~a~~~~i~~~v~~~p 198 (286)
|.|+|+|||=.+|..+.....++..|++++
T Consensus 59 i~lvAWSmGVw~A~~~l~~~~~~~aiAING 88 (213)
T PF04301_consen 59 IYLVAWSMGVWAANRVLQGIPFKRAIAING 88 (213)
T ss_pred EEEEEEeHHHHHHHHHhccCCcceeEEEEC
Confidence 999999999999988766556666666654
No 206
>KOG4389|consensus
Probab=96.15 E-value=0.049 Score=47.60 Aligned_cols=92 Identities=18% Similarity=0.211 Sum_probs=55.4
Q ss_pred cCCCCeEEEEecCCccccch---hhHHHHhhccccceeEEEeeccCcCCCCcc---CCCCCCChhhHHHHHHHHHHHHHH
Q psy4394 87 SPNARFTILFSHGNAVDIGQ---MSSFFTGLGSRINCNIFSYDYSGYDYSGYG---ISTGRPSEKNLYADIDAAWNTLRT 160 (286)
Q Consensus 87 ~~~~~p~vv~~HG~~~~~~~---~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G---~s~~~~~~~~~~~d~~~~~~~l~~ 160 (286)
++.+..++|++.|+|.-.+. -..--..++......|+.++||-. .-|+= .....+...+ .-|..-+++|+++
T Consensus 131 ~p~n~tVlVWiyGGGF~sGt~SLdvYdGk~la~~envIvVs~NYRvG-~FGFL~l~~~~eaPGNmG-l~DQqLAl~WV~~ 208 (601)
T KOG4389|consen 131 DPYNLTVLVWIYGGGFYSGTPSLDVYDGKFLAAVENVIVVSMNYRVG-AFGFLYLPGHPEAPGNMG-LLDQQLALQWVQE 208 (601)
T ss_pred CCCCceEEEEEEcCccccCCcceeeeccceeeeeccEEEEEeeeeec-cceEEecCCCCCCCCccc-hHHHHHHHHHHHH
Confidence 55555688999997743221 111122344444677788888411 01221 1122233333 3577888999988
Q ss_pred H---hCCCCCcEEEEEeecChHH
Q psy4394 161 R---YGISPENIILYGQSIGTVP 180 (286)
Q Consensus 161 ~---~~~~~~~i~l~G~S~Gg~~ 180 (286)
+ +|-++++|.|+|.|.|++-
T Consensus 209 Ni~aFGGnp~~vTLFGESAGaAS 231 (601)
T KOG4389|consen 209 NIAAFGGNPSRVTLFGESAGAAS 231 (601)
T ss_pred hHHHhCCCcceEEEeccccchhh
Confidence 7 4668999999999999953
No 207
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.06 E-value=0.013 Score=47.02 Aligned_cols=50 Identities=20% Similarity=0.252 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc-------CccEEEEeCCCC
Q psy4394 149 ADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY-------QVGAVILHSPLM 200 (286)
Q Consensus 149 ~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-------~i~~~v~~~p~~ 200 (286)
.++...+..+++++ +..++.+.|||+||.+|..++... .+..+..-+|..
T Consensus 112 ~~~~~~~~~~~~~~--p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~v 168 (229)
T cd00519 112 NQVLPELKSALKQY--PDYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPRV 168 (229)
T ss_pred HHHHHHHHHHHhhC--CCceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCCC
Confidence 44444444444443 345899999999999999887753 356555556654
No 208
>PLN02454 triacylglycerol lipase
Probab=95.81 E-value=0.016 Score=50.10 Aligned_cols=42 Identities=24% Similarity=0.213 Sum_probs=30.8
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhh
Q psy4394 146 NLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASR 187 (286)
Q Consensus 146 ~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 187 (286)
...+++...++.+.+.+.-..-+|++.|||+||++|+..|..
T Consensus 207 S~r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 207 SARSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 344567777777777764222259999999999999998864
No 209
>PF03283 PAE: Pectinacetylesterase
Probab=95.81 E-value=0.049 Score=46.79 Aligned_cols=38 Identities=24% Similarity=0.316 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHH-hCCCCCcEEEEEeecChHHHHHHHh
Q psy4394 148 YADIDAAWNTLRTR-YGISPENIILYGQSIGTVPTIDLAS 186 (286)
Q Consensus 148 ~~d~~~~~~~l~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~ 186 (286)
...+.++++++..+ +. ++++++|.|.|.||.-++.-+-
T Consensus 137 ~~i~~avl~~l~~~gl~-~a~~vlltG~SAGG~g~~~~~d 175 (361)
T PF03283_consen 137 YRILRAVLDDLLSNGLP-NAKQVLLTGCSAGGLGAILHAD 175 (361)
T ss_pred HHHHHHHHHHHHHhcCc-ccceEEEeccChHHHHHHHHHH
Confidence 35678999999998 33 4679999999999987776543
No 210
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=95.74 E-value=0.19 Score=44.93 Aligned_cols=115 Identities=20% Similarity=0.191 Sum_probs=71.9
Q ss_pred EEEEEEEeecCCCCeEEEEecCCccccchhhH-----HHHhhccccceeEEEeeccCcCCCCccCCCC--C----CChhh
Q psy4394 78 RLACMFMKCSPNARFTILFSHGNAVDIGQMSS-----FFTGLGSRINCNIFSYDYSGYDYSGYGISTG--R----PSEKN 146 (286)
Q Consensus 78 ~l~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~-----~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~--~----~~~~~ 146 (286)
.|...++.|. +=..-++.+-|+|.+...... ....+ ..||+++.-|- ||..+.. . ...+.
T Consensus 16 ~i~fev~LP~-~WNgR~~~~GgGG~~G~i~~~~~~~~~~~~~--~~G~A~~~TD~------Gh~~~~~~~~~~~~~n~~~ 86 (474)
T PF07519_consen 16 NIRFEVWLPD-NWNGRFLQVGGGGFAGGINYADGKASMATAL--ARGYATASTDS------GHQGSAGSDDASFGNNPEA 86 (474)
T ss_pred eEEEEEECCh-hhccCeEEECCCeeeCcccccccccccchhh--hcCeEEEEecC------CCCCCcccccccccCCHHH
Confidence 6777777765 212235555555443322111 22233 44999999996 5544322 1 11111
Q ss_pred H-------HHHHHHHHHHHHHH-hCCCCCcEEEEEeecChHHHHHHHhhc--CccEEEEeCCCCc
Q psy4394 147 L-------YADIDAAWNTLRTR-YGISPENIILYGQSIGTVPTIDLASRY--QVGAVILHSPLMS 201 (286)
Q Consensus 147 ~-------~~d~~~~~~~l~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~~ 201 (286)
+ +.+...+-+.+.+. |+..+++-+..|.|.||.-++..|.++ .++++++.+|..+
T Consensus 87 ~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQryP~dfDGIlAgaPA~~ 151 (474)
T PF07519_consen 87 LLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQRYPEDFDGILAGAPAIN 151 (474)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHHhChhhcCeEEeCCchHH
Confidence 1 23344444555544 567788999999999999999999999 9999999999754
No 211
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=95.72 E-value=0.03 Score=50.38 Aligned_cols=84 Identities=11% Similarity=0.140 Sum_probs=52.8
Q ss_pred hhHHHHhhccccceeEEEeeccCcCCCCccC----CCCC-CChhhHHHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHH
Q psy4394 107 MSSFFTGLGSRINCNIFSYDYSGYDYSGYGI----STGR-PSEKNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPT 181 (286)
Q Consensus 107 ~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~----s~~~-~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a 181 (286)
|..+++.|. ..||. ..|+ .|... +... .....+...+...++.+.+..+ .++++|+||||||.++
T Consensus 158 w~kLIe~L~-~iGY~--~~nL-----~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~ng--gkKVVLV~HSMGglv~ 227 (642)
T PLN02517 158 WAVLIANLA-RIGYE--EKNM-----YMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVATNG--GKKVVVVPHSMGVLYF 227 (642)
T ss_pred HHHHHHHHH-HcCCC--CCce-----eecccccccCccchhhhhHHHHHHHHHHHHHHHHcC--CCeEEEEEeCCchHHH
Confidence 467777777 45775 3344 32221 1111 1224555777788877766532 4599999999999999
Q ss_pred HHHHhh-------------c----CccEEEEeCCCC
Q psy4394 182 IDLASR-------------Y----QVGAVILHSPLM 200 (286)
Q Consensus 182 ~~~a~~-------------~----~i~~~v~~~p~~ 200 (286)
+.+... . .|++.|.++|..
T Consensus 228 lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~ 263 (642)
T PLN02517 228 LHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPF 263 (642)
T ss_pred HHHHHhccccccccCCcchHHHHHHHHHheeccccc
Confidence 886541 1 578888887654
No 212
>PLN02408 phospholipase A1
Probab=95.42 E-value=0.028 Score=47.91 Aligned_cols=40 Identities=20% Similarity=0.257 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc
Q psy4394 149 ADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY 188 (286)
Q Consensus 149 ~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 188 (286)
+.+.+.++.+.++++-...+|.+.|||+||++|...|...
T Consensus 182 ~qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl 221 (365)
T PLN02408 182 EMVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDI 221 (365)
T ss_pred HHHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHH
Confidence 4455556666666542334699999999999999888654
No 213
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=95.41 E-value=0.018 Score=40.34 Aligned_cols=55 Identities=13% Similarity=0.238 Sum_probs=29.7
Q ss_pred cccccccccCCccccEEEeccCCCEEEEEEEeecCCCCeEEEEecCCccccchhhH
Q psy4394 54 AEWQYGDNERSNIEGFFTRTSRGNRLACMFMKCSPNARFTILFSHGNAVDIGQMSS 109 (286)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~ 109 (286)
.+|.-....+.....+.. .-+|..|+....++.......+|++||++++--++..
T Consensus 56 fDWr~~E~~lN~~phf~t-~I~g~~iHFih~rs~~~~aiPLll~HGWPgSf~Ef~~ 110 (112)
T PF06441_consen 56 FDWRKHEARLNSFPHFKT-EIDGLDIHFIHVRSKRPNAIPLLLLHGWPGSFLEFLK 110 (112)
T ss_dssp --HHHHHHHHTTS-EEEE-EETTEEEEEEEE--S-TT-EEEEEE--SS--GGGGHH
T ss_pred CChHHHHHHHHcCCCeeE-EEeeEEEEEEEeeCCCCCCeEEEEECCCCccHHhHHh
Confidence 344433444444444544 4479999999888766666789999999997766554
No 214
>PLN02571 triacylglycerol lipase
Probab=95.23 E-value=0.033 Score=48.20 Aligned_cols=40 Identities=18% Similarity=0.154 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhh
Q psy4394 148 YADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASR 187 (286)
Q Consensus 148 ~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 187 (286)
.+++.+.++.+.+.+.-..-+|.+.|||+||.+|+..|..
T Consensus 207 r~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 207 RDQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 3455555555555543122379999999999999988865
No 215
>KOG4540|consensus
Probab=94.90 E-value=0.069 Score=43.38 Aligned_cols=50 Identities=26% Similarity=0.347 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhcCccEEEEeCCC
Q psy4394 148 YADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRYQVGAVILHSPL 199 (286)
Q Consensus 148 ~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~i~~~v~~~p~ 199 (286)
..+..+++..+++.+ ...+|.+-|||+||++|..+...+.+-.+...+|-
T Consensus 259 ySa~ldI~~~v~~~Y--pda~iwlTGHSLGGa~AsLlG~~fglP~VaFesPG 308 (425)
T KOG4540|consen 259 YSAALDILGAVRRIY--PDARIWLTGHSLGGAIASLLGIRFGLPVVAFESPG 308 (425)
T ss_pred hHHHHHHHHHHHHhC--CCceEEEeccccchHHHHHhccccCCceEEecCch
Confidence 345555666666665 35699999999999999999888877777777774
No 216
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=94.90 E-value=0.069 Score=43.38 Aligned_cols=50 Identities=26% Similarity=0.347 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhcCccEEEEeCCC
Q psy4394 148 YADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRYQVGAVILHSPL 199 (286)
Q Consensus 148 ~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~i~~~v~~~p~ 199 (286)
..+..+++..+++.+ ...+|.+-|||+||++|..+...+.+-.+...+|-
T Consensus 259 ySa~ldI~~~v~~~Y--pda~iwlTGHSLGGa~AsLlG~~fglP~VaFesPG 308 (425)
T COG5153 259 YSAALDILGAVRRIY--PDARIWLTGHSLGGAIASLLGIRFGLPVVAFESPG 308 (425)
T ss_pred hHHHHHHHHHHHHhC--CCceEEEeccccchHHHHHhccccCCceEEecCch
Confidence 345555666666665 35699999999999999999888877777777774
No 217
>PLN02324 triacylglycerol lipase
Probab=94.90 E-value=0.053 Score=46.89 Aligned_cols=41 Identities=20% Similarity=0.245 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhh
Q psy4394 147 LYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASR 187 (286)
Q Consensus 147 ~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 187 (286)
.-+.+.+.++.+.+.+.-..-+|.+.|||+||++|+..|..
T Consensus 195 areqVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 195 AQEQVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 33455566666666654222379999999999999988854
No 218
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=94.87 E-value=0.48 Score=39.38 Aligned_cols=95 Identities=17% Similarity=0.179 Sum_probs=61.9
Q ss_pred CCCCeEEEEecCCcccc-----chhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCC----------------Chhh
Q psy4394 88 PNARFTILFSHGNAVDI-----GQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRP----------------SEKN 146 (286)
Q Consensus 88 ~~~~p~vv~~HG~~~~~-----~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~----------------~~~~ 146 (286)
+..+.+|+++-|....- ......+..+...-+-.++++=- +|.|.-.-.. --.+
T Consensus 28 ds~k~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd-----~GVGt~Gfdavvdvrrrl~~~~~gsmFg~g 102 (423)
T COG3673 28 DSMKRLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYD-----EGVGTGGFDAVVDVRRRLEKLSGGSMFGQG 102 (423)
T ss_pred cCcceEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEec-----CCcccccchhhHHHHHhhhhhhhHHHHHHH
Confidence 35677888888853221 23334444454323667776655 6666432110 0123
Q ss_pred HHHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc
Q psy4394 147 LYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY 188 (286)
Q Consensus 147 ~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 188 (286)
..+.+..+..++..++. ..++|+++|+|-|++.|-.+|...
T Consensus 103 L~~nI~~AYrFL~~~ye-pGD~Iy~FGFSRGAf~aRVlagmi 143 (423)
T COG3673 103 LVQNIREAYRFLIFNYE-PGDEIYAFGFSRGAFSARVLAGMI 143 (423)
T ss_pred HHHHHHHHHHHHHHhcC-CCCeEEEeeccchhHHHHHHHHHH
Confidence 45788999999999876 457999999999999998877654
No 219
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=94.82 E-value=0.15 Score=43.93 Aligned_cols=100 Identities=22% Similarity=0.218 Sum_probs=74.3
Q ss_pred cCCCCeEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCC------ChhhHHHHHHHHHHHHHH
Q psy4394 87 SPNARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRP------SEKNLYADIDAAWNTLRT 160 (286)
Q Consensus 87 ~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~------~~~~~~~d~~~~~~~l~~ 160 (286)
.+...|+|++.-|++.+......-...+. +-+-+.+++ |=++.|.+.+ +......|...+++.++.
T Consensus 59 k~~drPtV~~T~GY~~~~~p~r~Ept~Ll---d~NQl~vEh-----RfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~ 130 (448)
T PF05576_consen 59 KDFDRPTVLYTEGYNVSTSPRRSEPTQLL---DGNQLSVEH-----RFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKP 130 (448)
T ss_pred cCCCCCeEEEecCcccccCccccchhHhh---ccceEEEEE-----eeccCCCCCCCCcccccHhHhhHHHHHHHHHHHh
Confidence 44677999999998875433333333343 457789999 9999998764 334456899999999988
Q ss_pred HhCCCCCcEEEEEeecChHHHHHHHhhc--CccEEEEeC
Q psy4394 161 RYGISPENIILYGQSIGTVPTIDLASRY--QVGAVILHS 197 (286)
Q Consensus 161 ~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~ 197 (286)
-+ +.+.+--|.|=||+.++..=..+ .+++.|.-.
T Consensus 131 iY---~~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYV 166 (448)
T PF05576_consen 131 IY---PGKWISTGGSKGGMTAVYYRRFYPDDVDGTVAYV 166 (448)
T ss_pred hc---cCCceecCcCCCceeEEEEeeeCCCCCCeeeeee
Confidence 76 45899999999999888665555 888887753
No 220
>PLN02802 triacylglycerol lipase
Probab=94.50 E-value=0.056 Score=47.77 Aligned_cols=40 Identities=18% Similarity=0.245 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc
Q psy4394 149 ADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY 188 (286)
Q Consensus 149 ~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 188 (286)
+++.+.++.+.+.+.-..-+|.+.|||+||.+|...|...
T Consensus 312 eqVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL 351 (509)
T PLN02802 312 ESVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADEL 351 (509)
T ss_pred HHHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHH
Confidence 3444555555555431223799999999999999887654
No 221
>PLN02162 triacylglycerol lipase
Probab=94.09 E-value=0.082 Score=46.30 Aligned_cols=35 Identities=20% Similarity=0.191 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHh
Q psy4394 150 DIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLAS 186 (286)
Q Consensus 150 d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~ 186 (286)
.+...++.+.+++ +..++++.|||+||++|..+|.
T Consensus 263 ~I~~~L~~lL~k~--p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 263 TIRQMLRDKLARN--KNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHHhC--CCceEEEEecChHHHHHHHHHH
Confidence 3444444444443 3458999999999999988765
No 222
>PLN02753 triacylglycerol lipase
Probab=94.00 E-value=0.085 Score=46.88 Aligned_cols=40 Identities=25% Similarity=0.155 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHHHhCC---CCCcEEEEEeecChHHHHHHHhh
Q psy4394 148 YADIDAAWNTLRTRYGI---SPENIILYGQSIGTVPTIDLASR 187 (286)
Q Consensus 148 ~~d~~~~~~~l~~~~~~---~~~~i~l~G~S~Gg~~a~~~a~~ 187 (286)
.+.+.+.++.+.++++- ..-+|.+.|||+||++|+..|..
T Consensus 290 reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 290 REQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 35556666666666532 13589999999999999988853
No 223
>KOG2369|consensus
Probab=93.88 E-value=0.2 Score=43.76 Aligned_cols=72 Identities=14% Similarity=0.223 Sum_probs=43.2
Q ss_pred hhhHHHHhhcccccee------EEEeeccCcCCCCccCCCCCC-ChhhHHHHHHHHHHHHHHHhCCCCCcEEEEEeecCh
Q psy4394 106 QMSSFFTGLGSRINCN------IFSYDYSGYDYSGYGISTGRP-SEKNLYADIDAAWNTLRTRYGISPENIILYGQSIGT 178 (286)
Q Consensus 106 ~~~~~~~~l~~~~g~~------vi~~d~~~~~~~G~G~s~~~~-~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg 178 (286)
-|..+++.+. ..||. -..+|+ | .|-... ..+.....+...++..-+..+ .++++|++||||+
T Consensus 125 ~w~~~i~~lv-~~GYe~~~~l~ga~YDw-----R---ls~~~~e~rd~yl~kLK~~iE~~~~~~G--~kkVvlisHSMG~ 193 (473)
T KOG2369|consen 125 YWHELIENLV-GIGYERGKTLFGAPYDW-----R---LSYHNSEERDQYLSKLKKKIETMYKLNG--GKKVVLISHSMGG 193 (473)
T ss_pred HHHHHHHHHH-hhCcccCceeeccccch-----h---hccCChhHHHHHHHHHHHHHHHHHHHcC--CCceEEEecCCcc
Confidence 3455666665 44665 345666 4 111111 123334566666666655543 2699999999999
Q ss_pred HHHHHHHhhc
Q psy4394 179 VPTIDLASRY 188 (286)
Q Consensus 179 ~~a~~~a~~~ 188 (286)
.+.+.+...+
T Consensus 194 l~~lyFl~w~ 203 (473)
T KOG2369|consen 194 LYVLYFLKWV 203 (473)
T ss_pred HHHHHHHhcc
Confidence 9998877544
No 224
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=93.87 E-value=0.34 Score=41.06 Aligned_cols=76 Identities=16% Similarity=0.183 Sum_probs=48.7
Q ss_pred eEEEeeccCcCCC-CccCCCCCC-----ChhhHHHHHHHHHHHHHHH-hCCCCCcEEEEEeecChHHHHHHHhhc-----
Q psy4394 121 NIFSYDYSGYDYS-GYGISTGRP-----SEKNLYADIDAAWNTLRTR-YGISPENIILYGQSIGTVPTIDLASRY----- 188 (286)
Q Consensus 121 ~vi~~d~~~~~~~-G~G~s~~~~-----~~~~~~~d~~~~~~~l~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~----- 188 (286)
+++-+|. | |.|.|-... ......+|+..+++.+.++ ..+...+++|.|-|+||..+-.+|..-
T Consensus 3 NvLfiDq-----PvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~ 77 (319)
T PLN02213 3 NIIFLDQ-----PVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNY 77 (319)
T ss_pred cEEEecC-----CCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcc
Confidence 6788887 6 778774331 1122235665555444333 345667999999999997555554421
Q ss_pred -------CccEEEEeCCCCc
Q psy4394 189 -------QVGAVILHSPLMS 201 (286)
Q Consensus 189 -------~i~~~v~~~p~~~ 201 (286)
.++|+++-+|+++
T Consensus 78 ~~~~~~inLkGi~IGNg~t~ 97 (319)
T PLN02213 78 ICCEPPINLQGYMLGNPVTY 97 (319)
T ss_pred cccCCceeeeEEEeCCCCCC
Confidence 6789999888765
No 225
>PLN00413 triacylglycerol lipase
Probab=93.85 E-value=0.1 Score=45.89 Aligned_cols=35 Identities=20% Similarity=0.262 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHh
Q psy4394 150 DIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLAS 186 (286)
Q Consensus 150 d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~ 186 (286)
.+...++.+.+++ +..++.+.|||+||++|..+|.
T Consensus 269 ~i~~~Lk~ll~~~--p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 269 TILRHLKEIFDQN--PTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHHC--CCCeEEEEecCHHHHHHHHHHH
Confidence 4445555555554 3458999999999999998875
No 226
>PLN02934 triacylglycerol lipase
Probab=93.83 E-value=0.11 Score=46.03 Aligned_cols=37 Identities=14% Similarity=0.229 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhh
Q psy4394 149 ADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASR 187 (286)
Q Consensus 149 ~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 187 (286)
..+...++.+.+++ +..++++.|||+||++|..++..
T Consensus 305 ~~v~~~lk~ll~~~--p~~kIvVTGHSLGGALAtLaA~~ 341 (515)
T PLN02934 305 YAVRSKLKSLLKEH--KNAKFVVTGHSLGGALAILFPTV 341 (515)
T ss_pred HHHHHHHHHHHHHC--CCCeEEEeccccHHHHHHHHHHH
Confidence 34555566665554 34589999999999999988753
No 227
>PLN02761 lipase class 3 family protein
Probab=93.63 E-value=0.11 Score=46.12 Aligned_cols=40 Identities=23% Similarity=0.240 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHHhCC----CCCcEEEEEeecChHHHHHHHhh
Q psy4394 148 YADIDAAWNTLRTRYGI----SPENIILYGQSIGTVPTIDLASR 187 (286)
Q Consensus 148 ~~d~~~~~~~l~~~~~~----~~~~i~l~G~S~Gg~~a~~~a~~ 187 (286)
-+++.+.++.+.+.++- ..-+|.+.|||+||++|+..|..
T Consensus 271 R~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~D 314 (527)
T PLN02761 271 REQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYD 314 (527)
T ss_pred HHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHH
Confidence 34556666666665521 22379999999999999988753
No 228
>PLN02310 triacylglycerol lipase
Probab=93.47 E-value=0.11 Score=44.98 Aligned_cols=38 Identities=16% Similarity=0.151 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHhC-C-CCCcEEEEEeecChHHHHHHHhh
Q psy4394 150 DIDAAWNTLRTRYG-I-SPENIILYGQSIGTVPTIDLASR 187 (286)
Q Consensus 150 d~~~~~~~l~~~~~-~-~~~~i~l~G~S~Gg~~a~~~a~~ 187 (286)
.+.+.++.+.+.+. - ...+|.+.|||+||++|+..|..
T Consensus 190 qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 190 QVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 34444444544432 1 12479999999999999988754
No 229
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=93.38 E-value=0.48 Score=35.68 Aligned_cols=56 Identities=18% Similarity=0.093 Sum_probs=43.8
Q ss_pred hhHHHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc--CccEEEEeCCCCcc
Q psy4394 145 KNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY--QVGAVILHSPLMSG 202 (286)
Q Consensus 145 ~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~~~ 202 (286)
.+..+-..+.-+|+.++.- +.+..+-|.||||+.|+.+.-++ -+.++|..|+.++.
T Consensus 81 adr~~rH~AyerYv~eEal--pgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYda 138 (227)
T COG4947 81 ADRAERHRAYERYVIEEAL--PGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYDA 138 (227)
T ss_pred HHHHHHHHHHHHHHHHhhc--CCCccccccchhhhhhhhhheeChhHhhhheeecceeeH
Confidence 3334555667778877632 34688999999999999999988 77899999999883
No 230
>PLN02719 triacylglycerol lipase
Probab=93.20 E-value=0.15 Score=45.30 Aligned_cols=40 Identities=23% Similarity=0.243 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHHHhCC---CCCcEEEEEeecChHHHHHHHhh
Q psy4394 148 YADIDAAWNTLRTRYGI---SPENIILYGQSIGTVPTIDLASR 187 (286)
Q Consensus 148 ~~d~~~~~~~l~~~~~~---~~~~i~l~G~S~Gg~~a~~~a~~ 187 (286)
.+++.+.++.+.+.+.- ..-+|.+.|||+||++|+..|..
T Consensus 276 ReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 276 REQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 35556666666666531 12489999999999999988754
No 231
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=93.19 E-value=0.64 Score=38.49 Aligned_cols=42 Identities=26% Similarity=0.373 Sum_probs=33.9
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc
Q psy4394 146 NLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY 188 (286)
Q Consensus 146 ~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 188 (286)
+..+.+..++.++.+++. +.++|.++|+|-|+++|-.+|..-
T Consensus 72 g~~~~I~~ay~~l~~~~~-~gd~I~lfGFSRGA~~AR~~a~~i 113 (277)
T PF09994_consen 72 GIEARIRDAYRFLSKNYE-PGDRIYLFGFSRGAYTARAFANMI 113 (277)
T ss_pred chHHHHHHHHHHHHhccC-CcceEEEEecCccHHHHHHHHHHH
Confidence 445778888999888874 557999999999999998887653
No 232
>PLN03037 lipase class 3 family protein; Provisional
Probab=92.73 E-value=0.15 Score=45.27 Aligned_cols=21 Identities=19% Similarity=0.248 Sum_probs=18.4
Q ss_pred CcEEEEEeecChHHHHHHHhh
Q psy4394 167 ENIILYGQSIGTVPTIDLASR 187 (286)
Q Consensus 167 ~~i~l~G~S~Gg~~a~~~a~~ 187 (286)
-+|.+.|||+||++|+..|..
T Consensus 318 ~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 318 VSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred ceEEEeccCHHHHHHHHHHHH
Confidence 379999999999999988854
No 233
>PLN02847 triacylglycerol lipase
Probab=92.41 E-value=1.6 Score=39.72 Aligned_cols=21 Identities=24% Similarity=0.188 Sum_probs=18.4
Q ss_pred CcEEEEEeecChHHHHHHHhh
Q psy4394 167 ENIILYGQSIGTVPTIDLASR 187 (286)
Q Consensus 167 ~~i~l~G~S~Gg~~a~~~a~~ 187 (286)
=+++++|||+||.+|..++..
T Consensus 251 YkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 251 FKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CeEEEeccChHHHHHHHHHHH
Confidence 389999999999999888764
No 234
>KOG4372|consensus
Probab=92.09 E-value=0.29 Score=41.96 Aligned_cols=88 Identities=14% Similarity=0.067 Sum_probs=42.2
Q ss_pred CCCeEEEEecCCcc-ccchhhHHHHhhcccc-ceeEEEeeccCcCCCCccCCCCCC-ChhhHHHHHHHHHHHHHHHhCCC
Q psy4394 89 NARFTILFSHGNAV-DIGQMSSFFTGLGSRI-NCNIFSYDYSGYDYSGYGISTGRP-SEKNLYADIDAAWNTLRTRYGIS 165 (286)
Q Consensus 89 ~~~p~vv~~HG~~~-~~~~~~~~~~~l~~~~-g~~vi~~d~~~~~~~G~G~s~~~~-~~~~~~~d~~~~~~~l~~~~~~~ 165 (286)
++.-.||+.||.-+ +...|...+....... ++.++...+ .|.-...... ...+ ........+.+... .
T Consensus 78 k~~HLvVlthGi~~~~~~~~~~~~~~~~kk~p~~~iv~~g~-----~~~~~~T~~Gv~~lG-~Rla~~~~e~~~~~-s-- 148 (405)
T KOG4372|consen 78 KPKHLVVLTHGLHGADMEYWKEKIEQMTKKMPDKLIVVRGK-----MNNMCQTFDGVDVLG-ERLAEEVKETLYDY-S-- 148 (405)
T ss_pred CCceEEEeccccccccHHHHHHHHHhhhcCCCcceEeeecc-----ccchhhccccceeee-cccHHHHhhhhhcc-c--
Confidence 45578999999777 4555555555444322 443333333 3221111000 0000 01111122222111 1
Q ss_pred CCcEEEEEeecChHHHHHHH
Q psy4394 166 PENIILYGQSIGTVPTIDLA 185 (286)
Q Consensus 166 ~~~i~l~G~S~Gg~~a~~~a 185 (286)
-++|-.+|||+||.++..+.
T Consensus 149 i~kISfvghSLGGLvar~AI 168 (405)
T KOG4372|consen 149 IEKISFVGHSLGGLVARYAI 168 (405)
T ss_pred cceeeeeeeecCCeeeeEEE
Confidence 24999999999997765433
No 235
>KOG1283|consensus
Probab=91.97 E-value=3.5 Score=34.54 Aligned_cols=125 Identities=18% Similarity=0.201 Sum_probs=74.7
Q ss_pred cCCCEEEEEEEeecC---CCCeEEEEecCCccccchhhHHHHhhcc-------c-----cceeEEEeeccCcCCCCccCC
Q psy4394 74 SRGNRLACMFMKCSP---NARFTILFSHGNAVDIGQMSSFFTGLGS-------R-----INCNIFSYDYSGYDYSGYGIS 138 (286)
Q Consensus 74 ~~g~~l~~~~~~~~~---~~~p~vv~~HG~~~~~~~~~~~~~~l~~-------~-----~g~~vi~~d~~~~~~~G~G~s 138 (286)
.++....+|+|.... ...|..+.+.|+++.+..-..-++.+.. + ....++.+|- +-|.|.|
T Consensus 11 r~~a~~F~wly~~~~~~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~adllfvDn----PVGaGfS 86 (414)
T KOG1283|consen 11 RTGAHMFWWLYYATANVKSERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKDADLLFVDN----PVGAGFS 86 (414)
T ss_pred ecCceEEEEEeeeccccccCCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhhccEEEecC----CCcCcee
Confidence 356666666665422 3468999999987654332211211110 0 0246777776 2355554
Q ss_pred C--CC----CChhhHHHHHHHHHHHHHHH-hCCCCCcEEEEEeecChHHHHHHHhhc-----------CccEEEEeCCCC
Q psy4394 139 T--GR----PSEKNLYADIDAAWNTLRTR-YGISPENIILYGQSIGTVPTIDLASRY-----------QVGAVILHSPLM 200 (286)
Q Consensus 139 ~--~~----~~~~~~~~d~~~~~~~l~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~-----------~i~~~v~~~p~~ 200 (286)
- +. ........|+.++++.+... ..+...+++|+--|+||-+|..++... .+.++++-.+++
T Consensus 87 yVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSWI 166 (414)
T KOG1283|consen 87 YVDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSWI 166 (414)
T ss_pred eecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCccc
Confidence 2 22 23344556777777655543 345566999999999999998777542 567788766665
Q ss_pred cc
Q psy4394 201 SG 202 (286)
Q Consensus 201 ~~ 202 (286)
+.
T Consensus 167 SP 168 (414)
T KOG1283|consen 167 SP 168 (414)
T ss_pred Ch
Confidence 53
No 236
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=91.60 E-value=0.98 Score=36.12 Aligned_cols=24 Identities=21% Similarity=0.432 Sum_probs=20.4
Q ss_pred CCCcEEEEEeecChHHHHHHHhhc
Q psy4394 165 SPENIILYGQSIGTVPTIDLASRY 188 (286)
Q Consensus 165 ~~~~i~l~G~S~Gg~~a~~~a~~~ 188 (286)
..++++++|+|+|+.++...+.+.
T Consensus 46 ~~~~vvV~GySQGA~Va~~~~~~l 69 (225)
T PF08237_consen 46 AGGPVVVFGYSQGAVVASNVLRRL 69 (225)
T ss_pred CCCCEEEEEECHHHHHHHHHHHHH
Confidence 457999999999999998877664
No 237
>KOG4569|consensus
Probab=90.35 E-value=0.38 Score=41.02 Aligned_cols=38 Identities=24% Similarity=0.222 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc
Q psy4394 149 ADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY 188 (286)
Q Consensus 149 ~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 188 (286)
..+.+.++.+...+. .-+|.+.|||+||.+|...|..-
T Consensus 155 ~~~~~~~~~L~~~~~--~~~i~vTGHSLGgAlA~laa~~i 192 (336)
T KOG4569|consen 155 SGLDAELRRLIELYP--NYSIWVTGHSLGGALASLAALDL 192 (336)
T ss_pred HHHHHHHHHHHHhcC--CcEEEEecCChHHHHHHHHHHHH
Confidence 455556666666653 34899999999999999888754
No 238
>KOG2521|consensus
Probab=89.26 E-value=13 Score=31.83 Aligned_cols=88 Identities=10% Similarity=-0.019 Sum_probs=52.2
Q ss_pred CCCeEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCCChhhHHHHHHHHHHHHHHHhCCCCCc
Q psy4394 89 NARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSEKNLYADIDAAWNTLRTRYGISPEN 168 (286)
Q Consensus 89 ~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~ 168 (286)
..+|+|+++.. .+....+......+-+..||.++.+-. +-+-.........-...+....+..+.+.++.++.+
T Consensus 37 s~k~Iv~~~gW-ag~~~r~l~ky~~~Yq~~g~~~~~~ta-----p~~~~~~~~s~~~~sl~~~~~~l~~L~~~~~~~~~p 110 (350)
T KOG2521|consen 37 SEKPIVVLLGW-AGAIDRNLMKYSKIYQDKGYIVVRITA-----PCPSVFLSASRRILSLSLASTRLSELLSDYNSDPCP 110 (350)
T ss_pred ccccEEEEeee-ccccchhHHHHHHHHhcCCceEEEecC-----cccccccccccccchhhHHHHHHHHHhhhccCCcCc
Confidence 34466665554 444444444444444455999888876 544332222222222345556666676776778889
Q ss_pred EEEEEeecChHHHH
Q psy4394 169 IILYGQSIGTVPTI 182 (286)
Q Consensus 169 i~l~G~S~Gg~~a~ 182 (286)
+++--+|+||...+
T Consensus 111 i~fh~FS~ng~~~~ 124 (350)
T KOG2521|consen 111 IIFHVFSGNGVRLM 124 (350)
T ss_pred eEEEEecCCceeeh
Confidence 99999999995443
No 239
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=87.92 E-value=2.9 Score=32.70 Aligned_cols=59 Identities=17% Similarity=0.234 Sum_probs=42.0
Q ss_pred eecCCCCeEEEEecCCccccchhhHHHHhhccccce-eEEEeeccCcCCCCccCCCCCCChhhHHHHHHHHHHHHHHH
Q psy4394 85 KCSPNARFTILFSHGNAVDIGQMSSFFTGLGSRINC-NIFSYDYSGYDYSGYGISTGRPSEKNLYADIDAAWNTLRTR 161 (286)
Q Consensus 85 ~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~-~vi~~d~~~~~~~G~G~s~~~~~~~~~~~d~~~~~~~l~~~ 161 (286)
+|..+...+|++.||...+.......+.......|| .|+.... -|+. ++..++++++++
T Consensus 132 ppl~k~e~~vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v~~v-----e~yP-------------~~d~vi~~l~~~ 191 (265)
T COG4822 132 PPLNKDEILVLMGHGTDHHSNAAYACLDHVLDEYGFDNVFVAAV-----EGYP-------------LVDTVIEYLRKN 191 (265)
T ss_pred CCcCcCeEEEEEecCCCccHHHHHHHHHHHHHhcCCCceEEEEe-----cCCC-------------cHHHHHHHHHHc
Confidence 334456689999999988877777777777777788 6666665 3322 356678888776
No 240
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=87.76 E-value=0.25 Score=41.83 Aligned_cols=134 Identities=13% Similarity=0.168 Sum_probs=77.9
Q ss_pred HHHHHHHHHHHHh-CCCCCcEEEEEeecChHHHHHHHhhc-CccEEEEeCCCCcccc------ccccccccccccc---c
Q psy4394 150 DIDAAWNTLRTRY-GISPENIILYGQSIGTVPTIDLASRY-QVGAVILHSPLMSGMR------VAFPRTKRTWFFD---V 218 (286)
Q Consensus 150 d~~~~~~~l~~~~-~~~~~~i~l~G~S~Gg~~a~~~a~~~-~i~~~v~~~p~~~~~~------~~~~~~~~~~~~~---~ 218 (286)
-+..+++-.++++ .+.-+.+.+-|.|--|..+...|..+ ++.++|...- |... .........|-.. .
T Consensus 216 a~srAMdlAq~eL~q~~Ik~F~VTGaSKRgWttwLTAIaDprv~aIvp~v~--D~Lni~a~L~hiyrsYGgnwpi~l~py 293 (507)
T COG4287 216 AVSRAMDLAQDELEQVEIKGFMVTGASKRGWTTWLTAIADPRVFAIVPFVY--DNLNIEAQLLHIYRSYGGNWPIKLAPY 293 (507)
T ss_pred HHHHHHHHHHhhhhheeeeeEEEeccccchHHHHHHHhcCcchhhhhhhHH--hhcccHHHHHHHHHhhCCCCCcccchh
Confidence 3344444444433 23345899999999999999888877 7777664321 2110 0011111122111 1
Q ss_pred cchhhhcccccccc-c-CCccccCC-----CCCCCCCCEEEEecCCCCccChhHHHHHHHHCCCCCCceEecCC
Q psy4394 219 FPRVIFANVKTPIM-G-LSTLENID-----KVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPRPVEPLWVEGL 285 (286)
Q Consensus 219 ~~~~~~~~~~~~~~-~-~~~~~~~~-----~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~ga 285 (286)
+.+-+......+.. . +.-.+++. ...++..|-.|+.|..|+..+++.+.-.++.+++.+-+..+|+.
T Consensus 294 yaegi~erl~tp~fkqL~~IiDPlay~~try~~RLalpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~ 367 (507)
T COG4287 294 YAEGIDERLETPLFKQLLEIIDPLAYRNTRYQLRLALPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPND 367 (507)
T ss_pred HhhhHHHhhcCHHHHHHHHhhcHHHHhhhhhhhhccccceeecccCCcccCCCccceeeccCCCceeeeeCCCC
Confidence 11111111111110 0 11112332 33567899999999999999999999999999998888888875
No 241
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=83.95 E-value=1.2 Score=33.13 Aligned_cols=78 Identities=14% Similarity=0.209 Sum_probs=48.3
Q ss_pred CeEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCCChhhHHHHHHHHHHHHHHHhCCCCCcEE
Q psy4394 91 RFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSEKNLYADIDAAWNTLRTRYGISPENII 170 (286)
Q Consensus 91 ~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~ 170 (286)
...||++-|++............ ++.-.++++|| +..... -|. +.+ +.+.
T Consensus 11 d~LIvyFaGwgtpps~v~HLilp---eN~dl~lcYDY-----~dl~ld----------fDf--------sAy----~hir 60 (214)
T COG2830 11 DHLIVYFAGWGTPPSAVNHLILP---ENHDLLLCYDY-----QDLNLD----------FDF--------SAY----RHIR 60 (214)
T ss_pred CEEEEEEecCCCCHHHHhhccCC---CCCcEEEEeeh-----hhcCcc----------cch--------hhh----hhhh
Confidence 34899999988765444333221 22235678899 422110 011 111 2778
Q ss_pred EEEeecChHHHHHHHhhcCccEEEEeCC
Q psy4394 171 LYGQSIGTVPTIDLASRYQVGAVILHSP 198 (286)
Q Consensus 171 l~G~S~Gg~~a~~~a~~~~i~~~v~~~p 198 (286)
++.+|||-.+|-.+....+++..+++++
T Consensus 61 lvAwSMGVwvAeR~lqg~~lksatAiNG 88 (214)
T COG2830 61 LVAWSMGVWVAERVLQGIRLKSATAING 88 (214)
T ss_pred hhhhhHHHHHHHHHHhhccccceeeecC
Confidence 9999999999988888777777777654
No 242
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=83.61 E-value=3.5 Score=35.23 Aligned_cols=36 Identities=19% Similarity=0.209 Sum_probs=25.4
Q ss_pred CCCcEEEEEeecChHHHHHHHhhc-------CccEEEEeCCCC
Q psy4394 165 SPENIILYGQSIGTVPTIDLASRY-------QVGAVILHSPLM 200 (286)
Q Consensus 165 ~~~~i~l~G~S~Gg~~a~~~a~~~-------~i~~~v~~~p~~ 200 (286)
...++.|+|||+|+.+........ -|.-+++++...
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv 260 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPV 260 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCC
Confidence 345799999999997776544332 467788886544
No 243
>KOG2029|consensus
Probab=79.17 E-value=5.4 Score=36.35 Aligned_cols=39 Identities=21% Similarity=0.184 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHH
Q psy4394 147 LYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLA 185 (286)
Q Consensus 147 ~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a 185 (286)
...-..++++.+.+..=-+..+|+.+||||||.++=.+.
T Consensus 506 l~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lL 544 (697)
T KOG2029|consen 506 LAARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLL 544 (697)
T ss_pred HHHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHH
Confidence 334555677777665322467899999999998775544
No 244
>KOG1202|consensus
Probab=78.93 E-value=13 Score=37.22 Aligned_cols=92 Identities=17% Similarity=0.220 Sum_probs=54.6
Q ss_pred CCCeEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCCChhhHHHHHH-HHHHHHHHHhCCCCC
Q psy4394 89 NARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSEKNLYADID-AAWNTLRTRYGISPE 167 (286)
Q Consensus 89 ~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~~~~~~~d~~-~~~~~l~~~~~~~~~ 167 (286)
...|.+.|+|.--+. ...++.++.+ ... |.||..-.+.-..+.++++. -.++.+++.. +..
T Consensus 2121 se~~~~Ffv~pIEG~----tt~l~~la~r-------le~-----PaYglQ~T~~vP~dSies~A~~yirqirkvQ--P~G 2182 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPIEGF----TTALESLASR-------LEI-----PAYGLQCTEAVPLDSIESLAAYYIRQIRKVQ--PEG 2182 (2376)
T ss_pred ccCCceEEEeccccc----hHHHHHHHhh-------cCC-----cchhhhccccCCcchHHHHHHHHHHHHHhcC--CCC
Confidence 456889999986443 3345555543 223 55554433333333333333 2344444432 345
Q ss_pred cEEEEEeecChHHHHHHHhhc----CccEEEEeCC
Q psy4394 168 NIILYGQSIGTVPTIDLASRY----QVGAVILHSP 198 (286)
Q Consensus 168 ~i~l~G~S~Gg~~a~~~a~~~----~i~~~v~~~p 198 (286)
+..++|+|+|+.++..+|... ....+|++.+
T Consensus 2183 PYrl~GYSyG~~l~f~ma~~Lqe~~~~~~lillDG 2217 (2376)
T KOG1202|consen 2183 PYRLAGYSYGACLAFEMASQLQEQQSPAPLILLDG 2217 (2376)
T ss_pred CeeeeccchhHHHHHHHHHHHHhhcCCCcEEEecC
Confidence 899999999999999888654 5556777643
No 245
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=75.94 E-value=9.2 Score=31.23 Aligned_cols=111 Identities=21% Similarity=0.119 Sum_probs=57.9
Q ss_pred CEEEEEEEeecC----CCCeEEEEecCCccccchhhHHHHhhccccceeEEEeecc-----CcCCCCccCCCCCC-Chh-
Q psy4394 77 NRLACMFMKCSP----NARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYS-----GYDYSGYGISTGRP-SEK- 145 (286)
Q Consensus 77 ~~l~~~~~~~~~----~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~-----~~~~~G~G~s~~~~-~~~- 145 (286)
..+.+.+..|.. ++.|.+++.||.++...........++ ..++.++..+.. ....+|++.+.... ...
T Consensus 31 ~~~~~~l~~p~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 109 (299)
T COG1073 31 IALAAVLHLPPSGNEEKKLPAVVFLHGFGSSKEQSLGYAVLLA-EKGYRVLAGDASLFGESGGDPRGLADSEGYAEDFSA 109 (299)
T ss_pred ceeeeEEEecCCCCccccCceEEeccCccccccCcchHHHHhh-hceeEEeeeccccccccccccccccCccccccccch
Confidence 445555554432 467899999999987766555555555 337777766640 11124433222211 000
Q ss_pred -hHHHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc
Q psy4394 146 -NLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY 188 (286)
Q Consensus 146 -~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 188 (286)
....+....+..-...++....+....|.+.|+..+..++...
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 153 (299)
T COG1073 110 AVLLLLSEGVLDKDYRLLGASLGPRILAGLSLGGPSAGALLAWG 153 (299)
T ss_pred hheeeeccccccHHHHHHhhhcCcceEEEEEeeccchHHHhhcc
Confidence 0001111111111111222335899999999998888777654
No 246
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=73.55 E-value=8.9 Score=24.69 Aligned_cols=44 Identities=14% Similarity=0.300 Sum_probs=31.7
Q ss_pred hhHHHHHHHHHHHHHHHhCCC-CCcEEEEEeecChHHHHHHHhhc
Q psy4394 145 KNLYADIDAAWNTLRTRYGIS-PENIILYGQSIGTVPTIDLASRY 188 (286)
Q Consensus 145 ~~~~~d~~~~~~~l~~~~~~~-~~~i~l~G~S~Gg~~a~~~a~~~ 188 (286)
.+..+.+...++|++++..++ ++++.++|-|-|=.+|..++...
T Consensus 17 ~GC~~~V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAsRIa~aF 61 (78)
T PF12242_consen 17 VGCARNVENQIEYVKSQGKINGPKKVLVIGASTGYGLASRIAAAF 61 (78)
T ss_dssp HHHHHHHHHHHHHHHHC---TS-SEEEEES-SSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCceEEEEecCCcccHHHHHHHHh
Confidence 455678888999998865443 36899999999999998877664
No 247
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=71.68 E-value=32 Score=28.47 Aligned_cols=34 Identities=21% Similarity=0.363 Sum_probs=25.2
Q ss_pred CcEEEEEeecChHHHHHHHhhc-----CccEEEEeCCCC
Q psy4394 167 ENIILYGQSIGTVPTIDLASRY-----QVGAVILHSPLM 200 (286)
Q Consensus 167 ~~i~l~G~S~Gg~~a~~~a~~~-----~i~~~v~~~p~~ 200 (286)
-+++|.|.|+|++-+...-... .+++++..+|..
T Consensus 109 PkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~ 147 (289)
T PF10081_consen 109 PKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPF 147 (289)
T ss_pred CeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCC
Confidence 4899999999997665433221 889999988754
No 248
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=59.55 E-value=11 Score=30.29 Aligned_cols=37 Identities=24% Similarity=0.182 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc
Q psy4394 151 IDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY 188 (286)
Q Consensus 151 ~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 188 (286)
..-+++.+.++ ++.++.-.+.|.|.|+.++..++...
T Consensus 14 h~GVl~~L~e~-gi~~~~~~i~G~SAGAl~aa~~asg~ 50 (233)
T cd07224 14 HLGVLSLLIEA-GVINETTPLAGASAGSLAAACSASGL 50 (233)
T ss_pred HHHHHHHHHHc-CCCCCCCEEEEEcHHHHHHHHHHcCC
Confidence 45567777766 55444568999999999999988754
No 249
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=58.62 E-value=7.6 Score=34.96 Aligned_cols=40 Identities=25% Similarity=0.350 Sum_probs=31.7
Q ss_pred CCCEEEEecCCCCccChhHHHHHHHHCCC-----------CCCceEecCCC
Q psy4394 247 TSPVLVIHGTEDEVIDLSHGIAIYERCPR-----------PVEPLWVEGLS 286 (286)
Q Consensus 247 ~~Pvlii~G~~D~~v~~~~~~~l~~~~~~-----------~~~~~~~~ga~ 286 (286)
-.++++.||..|.+||+..+.+.++++.. -.+++.+||.+
T Consensus 353 GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~ 403 (474)
T PF07519_consen 353 GGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMG 403 (474)
T ss_pred CCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCc
Confidence 47899999999999999999888876421 15777888753
No 250
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=55.15 E-value=1.4e+02 Score=26.24 Aligned_cols=28 Identities=18% Similarity=0.154 Sum_probs=21.9
Q ss_pred cEEEEEeecChHHHHHHHhhc--CccEEEE
Q psy4394 168 NIILYGQSIGTVPTIDLASRY--QVGAVIL 195 (286)
Q Consensus 168 ~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~ 195 (286)
-|+-+|-|.|..++..+.... .+-+++.
T Consensus 96 Gvi~~GGs~GT~lat~aMr~LPiG~PKlmV 125 (403)
T PF06792_consen 96 GVIGIGGSGGTALATAAMRALPIGFPKLMV 125 (403)
T ss_pred EEEEecCCccHHHHHHHHHhCCCCCCeEEE
Confidence 788899999999998888765 5555554
No 251
>PRK02399 hypothetical protein; Provisional
Probab=54.21 E-value=1.5e+02 Score=26.05 Aligned_cols=28 Identities=21% Similarity=0.197 Sum_probs=21.6
Q ss_pred cEEEEEeecChHHHHHHHhhc--CccEEEE
Q psy4394 168 NIILYGQSIGTVPTIDLASRY--QVGAVIL 195 (286)
Q Consensus 168 ~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~ 195 (286)
-++-+|-|.|..++..+.... .+-+++.
T Consensus 98 gviglGGs~GT~lat~aMr~LPiG~PKlmV 127 (406)
T PRK02399 98 GVIGLGGSGGTALATPAMRALPIGVPKLMV 127 (406)
T ss_pred EEEEecCcchHHHHHHHHHhCCCCCCeEEE
Confidence 788999999999988887766 5555544
No 252
>COG5441 Uncharacterized conserved protein [Function unknown]
Probab=52.77 E-value=98 Score=25.98 Aligned_cols=90 Identities=20% Similarity=0.160 Sum_probs=55.1
Q ss_pred EEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccCCCCC----------C----------Ch-hhHHHHHH
Q psy4394 94 ILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGR----------P----------SE-KNLYADID 152 (286)
Q Consensus 94 vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~----------~----------~~-~~~~~d~~ 152 (286)
.||+-|.+...++-..++..+.+..|..++.+|..-...+ .+... + +. ..+..-.+
T Consensus 4 rIyVvgT~DTKg~EL~ylad~I~~aG~~~v~vDvs~~~~~---~~~~dis~~~VA~~hp~~~qAv~~~~Drg~AiaaMa~ 80 (401)
T COG5441 4 RIYVVGTADTKGEELAYLADLIEAAGGSPVLVDVSTLRNP---TSEVDISAEDVAGAHPGGRQAVLDGNDRGSAIAAMAE 80 (401)
T ss_pred eEEEEecCCCcchhHHHHHHHHHHcCCCeEEEEeeccCCC---CCCcccCHHHHhhhCCCcceeEeccCchhHHHHHHHH
Confidence 5777787777766666777777677999999998211001 01100 0 00 11123345
Q ss_pred HHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc
Q psy4394 153 AAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY 188 (286)
Q Consensus 153 ~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 188 (286)
++.+++.++..++ -++-+|.|.|..+++-.+...
T Consensus 81 A~~r~l~sR~dV~--gmig~GGsgGT~lit~~m~~L 114 (401)
T COG5441 81 AFVRFLSSRGDVA--GMIGMGGSGGTALITPAMRRL 114 (401)
T ss_pred HHHHHhhcccchh--heeecCCCcchHhhhhHHHhc
Confidence 6777777775544 778888888888777776665
No 253
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=52.59 E-value=24 Score=28.40 Aligned_cols=37 Identities=5% Similarity=-0.025 Sum_probs=25.1
Q ss_pred CeEEEEecCCc--cccchhhHHHHhhccccceeEEEeec
Q psy4394 91 RFTILFSHGNA--VDIGQMSSFFTGLGSRINCNIFSYDY 127 (286)
Q Consensus 91 ~p~vv~~HG~~--~~~~~~~~~~~~l~~~~g~~vi~~d~ 127 (286)
.|.|+|+.=.+ .+...|...+.....+.|+.+..++.
T Consensus 31 ~~~v~fIPtAs~~~~~~~y~~~~~~af~~lG~~v~~l~~ 69 (233)
T PRK05282 31 RRKAVFIPYAGVTQSWDDYTAKVAEALAPLGIEVTGIHR 69 (233)
T ss_pred CCeEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEecc
Confidence 46688888765 33455555555556677999888876
No 254
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=51.44 E-value=1.6e+02 Score=25.28 Aligned_cols=71 Identities=15% Similarity=0.219 Sum_probs=49.9
Q ss_pred cccceeEEEeeccCcCCCCccCCCCCCChhhHHHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc----Ccc
Q psy4394 116 SRINCNIFSYDYSGYDYSGYGISTGRPSEKNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY----QVG 191 (286)
Q Consensus 116 ~~~g~~vi~~d~~~~~~~G~G~s~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~----~i~ 191 (286)
...||.|+.+|= .|.= .+..+.++.+..+.+-+.....-.|..+.++--+.-|.-++.-|..+ .+.
T Consensus 218 kar~~DvvliDT-----AGRL-----hnk~nLM~EL~KI~rV~~k~~~~ap~e~llvlDAttGqnal~QAk~F~eav~l~ 287 (340)
T COG0552 218 KARGIDVVLIDT-----AGRL-----HNKKNLMDELKKIVRVIKKDDPDAPHEILLVLDATTGQNALSQAKIFNEAVGLD 287 (340)
T ss_pred HHcCCCEEEEeC-----cccc-----cCchhHHHHHHHHHHHhccccCCCCceEEEEEEcccChhHHHHHHHHHHhcCCc
Confidence 344888888887 4322 23356667777777777666543456788888999998888888766 788
Q ss_pred EEEEe
Q psy4394 192 AVILH 196 (286)
Q Consensus 192 ~~v~~ 196 (286)
|+|+-
T Consensus 288 GiIlT 292 (340)
T COG0552 288 GIILT 292 (340)
T ss_pred eEEEE
Confidence 88863
No 255
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=51.10 E-value=12 Score=27.98 Aligned_cols=29 Identities=34% Similarity=0.526 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHhC--CCCCcEEEEEeecChH
Q psy4394 151 IDAAWNTLRTRYG--ISPENIILYGQSIGTV 179 (286)
Q Consensus 151 ~~~~~~~l~~~~~--~~~~~i~l~G~S~Gg~ 179 (286)
+..+-+.+.++++ ..+++|.|+|.|++..
T Consensus 86 l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 86 LIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp HHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred HHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 3333478887774 4578999999999987
No 256
>TIGR02069 cyanophycinase cyanophycinase. This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine.
Probab=49.31 E-value=82 Score=25.69 Aligned_cols=39 Identities=10% Similarity=0.126 Sum_probs=23.1
Q ss_pred CCCeEEEEecCCccccchhhHHHHhhcccccee-EEEeec
Q psy4394 89 NARFTILFSHGNAVDIGQMSSFFTGLGSRINCN-IFSYDY 127 (286)
Q Consensus 89 ~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~-vi~~d~ 127 (286)
++.|.|+++.-.+.....+...+....+++|+. |-.++.
T Consensus 26 ~~~~rI~~iptAS~~~~~~~~~~~~~~~~lG~~~v~~l~i 65 (250)
T TIGR02069 26 GEDAIIVIITSASEEPREVGERYITIFSRLGVKEVKILDV 65 (250)
T ss_pred CCCceEEEEeCCCCChHHHHHHHHHHHHHcCCceeEEEec
Confidence 455778888865554444444555555566774 555555
No 257
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=48.72 E-value=26 Score=27.33 Aligned_cols=40 Identities=18% Similarity=0.352 Sum_probs=29.6
Q ss_pred CCCEEEEecCCCCccChhHHHHHHHHC---CCC-CCceEecCCC
Q psy4394 247 TSPVLVIHGTEDEVIDLSHGIAIYERC---PRP-VEPLWVEGLS 286 (286)
Q Consensus 247 ~~Pvlii~G~~D~~v~~~~~~~l~~~~---~~~-~~~~~~~ga~ 286 (286)
++++|-|-|+.|++....+.....+.+ +.. +..++.+|+|
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~G 177 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVG 177 (202)
T ss_pred cceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCC
Confidence 478888999999999998776665554 433 5666777765
No 258
>KOG4287|consensus
Probab=48.21 E-value=3.6 Score=34.78 Aligned_cols=33 Identities=21% Similarity=0.159 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHhCCCCCcEEEEEeecChHHHHH
Q psy4394 151 IDAAWNTLRTRYGISPENIILYGQSIGTVPTID 183 (286)
Q Consensus 151 ~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~ 183 (286)
..++++.|..+.-.+.++..|-|-|.||..++.
T Consensus 160 w~av~~eLl~kGms~Ak~alLsGcSAGGLa~iL 192 (402)
T KOG4287|consen 160 WLAVMDELLAKGMSNAKQALLSGCSAGGLASIL 192 (402)
T ss_pred HHHHHHHHHHhhhhHHHHHHhhcCCccchhhee
Confidence 455667776664334568899999999976653
No 259
>PRK10279 hypothetical protein; Provisional
Probab=47.34 E-value=21 Score=30.00 Aligned_cols=35 Identities=29% Similarity=0.254 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc
Q psy4394 151 IDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY 188 (286)
Q Consensus 151 ~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 188 (286)
..-+++.+.++ ++. .-.+.|.|+|+.++..+|...
T Consensus 20 hiGVL~aL~E~-gi~--~d~i~GtS~GAlvga~yA~g~ 54 (300)
T PRK10279 20 HIGVINALKKV-GIE--IDIVAGCSIGSLVGAAYACDR 54 (300)
T ss_pred HHHHHHHHHHc-CCC--cCEEEEEcHHHHHHHHHHcCC
Confidence 35567777665 555 568999999999999988643
No 260
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=46.23 E-value=24 Score=26.64 Aligned_cols=35 Identities=31% Similarity=0.236 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc
Q psy4394 151 IDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY 188 (286)
Q Consensus 151 ~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 188 (286)
..-+++.+.++ ++. .-.+.|.|+|+.++..++...
T Consensus 13 ~~Gvl~aL~e~-gi~--~d~v~GtSaGAi~aa~~a~g~ 47 (172)
T cd07198 13 HVGVAKALRER-GPL--IDIIAGTSAGAIVAALLASGR 47 (172)
T ss_pred HHHHHHHHHHc-CCC--CCEEEEECHHHHHHHHHHcCC
Confidence 34566777666 444 668999999999999998764
No 261
>COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism]
Probab=46.06 E-value=1.7e+02 Score=24.29 Aligned_cols=82 Identities=18% Similarity=0.191 Sum_probs=45.1
Q ss_pred ccceeEEEeecc-CcCCCCccCCCCCCChhhHHHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHH----hhc--C
Q psy4394 117 RINCNIFSYDYS-GYDYSGYGISTGRPSEKNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLA----SRY--Q 189 (286)
Q Consensus 117 ~~g~~vi~~d~~-~~~~~G~G~s~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a----~~~--~ 189 (286)
..|+.|.++.=. -++|+|||...+.....+..+|+...++...... .=..++-|+=-.+...-.++ ... .
T Consensus 26 ~~G~~V~~vpTV~fSnHtgyg~~~g~v~~~e~l~~~l~~l~~~~~~~---~~davltGYlgs~~qv~~i~~~v~~vk~~~ 102 (281)
T COG2240 26 RLGLDVWAVPTVQFSNHTGYGKWTGIVMPPEQLADLLNGLEAIDKLG---ECDAVLTGYLGSAEQVRAIAGIVKAVKEAN 102 (281)
T ss_pred HcCCceeeeceEEecCCCCCCCCCCcCCCHHHHHHHHHHHHhccccc---ccCEEEEccCCCHHHHHHHHHHHHHHhccC
Confidence 558888766422 4567999997777666665555444444322221 12567777732222222222 111 5
Q ss_pred ccEEEEeCCCCc
Q psy4394 190 VGAVILHSPLMS 201 (286)
Q Consensus 190 i~~~v~~~p~~~ 201 (286)
-++++++.|+..
T Consensus 103 P~~~~l~DPVMG 114 (281)
T COG2240 103 PNALYLCDPVMG 114 (281)
T ss_pred CCeEEEeCCccc
Confidence 567788888764
No 262
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=45.56 E-value=1e+02 Score=23.94 Aligned_cols=66 Identities=12% Similarity=0.099 Sum_probs=37.1
Q ss_pred CCeEEEEecCCcccc---chhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCCChhhHHHHHHHHHHHHHHHhC
Q psy4394 90 ARFTILFSHGNAVDI---GQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSEKNLYADIDAAWNTLRTRYG 163 (286)
Q Consensus 90 ~~p~vv~~HG~~~~~---~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~~~~~~~d~~~~~~~l~~~~~ 163 (286)
.++.++++||..... .....+...|. +.|..+...-+ ++.|-.- .......+-...+++|+.+.++
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~-~~g~~~~~~~~-----p~~gH~~--~~~~~~~~~~~~~~~f~~~~l~ 211 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALR-KAGKPVELLIF-----PGEGHGF--GNPENRRDWYERILDFFDKYLK 211 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHH-HTTSSEEEEEE-----TT-SSST--TSHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHH-hcCCCEEEEEc-----CcCCCCC--CCchhHHHHHHHHHHHHHHHcC
Confidence 457799999975432 33444555555 44666666666 5433311 1122333556777888877653
No 263
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=44.89 E-value=14 Score=34.02 Aligned_cols=33 Identities=18% Similarity=0.259 Sum_probs=26.5
Q ss_pred EEEEEeecChHHHHHHHhhc---CccEEEEeCCCCc
Q psy4394 169 IILYGQSIGTVPTIDLASRY---QVGAVILHSPLMS 201 (286)
Q Consensus 169 i~l~G~S~Gg~~a~~~a~~~---~i~~~v~~~p~~~ 201 (286)
++.-+.|-||..++..|.++ -|++++..-|.+.
T Consensus 287 VIAssvSNGGgAal~AAEqD~~glIdgVvv~EP~v~ 322 (690)
T PF10605_consen 287 VIASSVSNGGGAALAAAEQDTQGLIDGVVVSEPNVN 322 (690)
T ss_pred EEEEeecCccHHHHhHhhcccCCceeeEEecCCccC
Confidence 45567889999999999987 8899998766543
No 264
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=44.70 E-value=24 Score=25.34 Aligned_cols=21 Identities=14% Similarity=-0.018 Sum_probs=16.5
Q ss_pred CCCCeEEEEecCCccccchhh
Q psy4394 88 PNARFTILFSHGNAVDIGQMS 108 (286)
Q Consensus 88 ~~~~p~vv~~HG~~~~~~~~~ 108 (286)
...+|.|+-+||+.+..-.+.
T Consensus 49 ~p~KpLVlSfHG~tGtGKn~v 69 (127)
T PF06309_consen 49 NPRKPLVLSFHGWTGTGKNFV 69 (127)
T ss_pred CCCCCEEEEeecCCCCcHHHH
Confidence 356899999999998775544
No 265
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=44.18 E-value=55 Score=25.93 Aligned_cols=38 Identities=16% Similarity=0.127 Sum_probs=27.7
Q ss_pred CCeEEEEecCCccccch--hhHHHHhhccccceeEEEeec
Q psy4394 90 ARFTILFSHGNAVDIGQ--MSSFFTGLGSRINCNIFSYDY 127 (286)
Q Consensus 90 ~~p~vv~~HG~~~~~~~--~~~~~~~l~~~~g~~vi~~d~ 127 (286)
+.+.|.|++-.+.+... +........+.+|+.+..++.
T Consensus 31 ~~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~lg~~v~~L~l 70 (224)
T COG3340 31 KRKTIAFIPTASVDSEDDFYVEKVRNALAKLGLEVSELHL 70 (224)
T ss_pred CCceEEEEecCccccchHHHHHHHHHHHHHcCCeeeeeec
Confidence 36789999887776654 556666666677999888877
No 266
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=43.70 E-value=27 Score=29.48 Aligned_cols=34 Identities=24% Similarity=0.177 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhh
Q psy4394 151 IDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASR 187 (286)
Q Consensus 151 ~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 187 (286)
..-+++.+.++ ++. .=.++|.|+|+.++..++..
T Consensus 30 hiGvL~aLee~-gi~--~d~v~GtSaGAi~ga~ya~g 63 (306)
T cd07225 30 HIGVIKALEEA-GIP--VDMVGGTSIGAFIGALYAEE 63 (306)
T ss_pred HHHHHHHHHHc-CCC--CCEEEEECHHHHHHHHHHcC
Confidence 35566777666 554 45789999999999998875
No 267
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=43.17 E-value=39 Score=28.58 Aligned_cols=37 Identities=16% Similarity=0.090 Sum_probs=24.5
Q ss_pred HHHHHHHHHHhCCCC-C-cEEEEEeecChHHHHHHHhhc
Q psy4394 152 DAAWNTLRTRYGISP-E-NIILYGQSIGTVPTIDLASRY 188 (286)
Q Consensus 152 ~~~~~~l~~~~~~~~-~-~i~l~G~S~Gg~~a~~~a~~~ 188 (286)
..+++.+.++.+.+. + -=.+.|.|.||.+|+.++...
T Consensus 15 i~vL~~le~~~g~~i~~~fD~i~GTStGgiIA~~la~g~ 53 (312)
T cd07212 15 IQMLIAIEKALGRPIRELFDWIAGTSTGGILALALLHGK 53 (312)
T ss_pred HHHHHHHHHHhCCCchhhccEEEeeChHHHHHHHHHcCC
Confidence 445666666544211 0 126899999999999998643
No 268
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=42.41 E-value=25 Score=29.02 Aligned_cols=31 Identities=19% Similarity=0.294 Sum_probs=21.4
Q ss_pred HHHHHHHHhCCCCCcEEEEEeecChHHHHHHHh
Q psy4394 154 AWNTLRTRYGISPENIILYGQSIGTVPTIDLAS 186 (286)
Q Consensus 154 ~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~ 186 (286)
+.+.+++..++. +-.++|||+|=+.|+.++.
T Consensus 72 l~~~l~~~g~i~--p~~v~GhS~GE~aAa~~aG 102 (290)
T TIGR00128 72 LYLKLKEQGGLK--PDFAAGHSLGEYSALVAAG 102 (290)
T ss_pred HHHHHHHcCCCC--CCEEeecCHHHHHHHHHhC
Confidence 334444442365 6689999999988877764
No 269
>PRK13690 hypothetical protein; Provisional
Probab=41.49 E-value=66 Score=24.55 Aligned_cols=31 Identities=16% Similarity=0.287 Sum_probs=27.1
Q ss_pred hhHHHHHHHHHHHHHHHhCCCCCcEEEEEee
Q psy4394 145 KNLYADIDAAWNTLRTRYGISPENIILYGQS 175 (286)
Q Consensus 145 ~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S 175 (286)
..+.++...+++.+.+..++.+..+.++|-|
T Consensus 4 ~~i~~~~~~~~~El~~~a~l~~g~i~VvGcS 34 (184)
T PRK13690 4 EEIKKQTRQILEELLEQANLKPGQIFVLGCS 34 (184)
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCCEEEEecc
Confidence 4566788999999999888889999999999
No 270
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=39.92 E-value=34 Score=26.33 Aligned_cols=34 Identities=29% Similarity=0.327 Sum_probs=25.3
Q ss_pred HHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc
Q psy4394 152 DAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY 188 (286)
Q Consensus 152 ~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 188 (286)
..+++.+.++ ++. .=.+.|.|.||.+|..++...
T Consensus 15 ~Gvl~~L~e~-~~~--~d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 15 IGALKALEEA-GIL--KKRVAGTSAGAITAALLALGY 48 (194)
T ss_pred HHHHHHHHHc-CCC--cceEEEECHHHHHHHHHHcCC
Confidence 4566666655 444 358999999999999988754
No 271
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=39.55 E-value=34 Score=28.23 Aligned_cols=33 Identities=24% Similarity=0.152 Sum_probs=24.9
Q ss_pred HHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhh
Q psy4394 152 DAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASR 187 (286)
Q Consensus 152 ~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 187 (286)
.-+++.+.++ ++. -=.+.|.|+|+.++..+|..
T Consensus 26 iGVL~aLeE~-gi~--~d~v~GtSaGAiiga~ya~g 58 (269)
T cd07227 26 IGILQALEEA-GIP--IDAIGGTSIGSFVGGLYARE 58 (269)
T ss_pred HHHHHHHHHc-CCC--ccEEEEECHHHHHHHHHHcC
Confidence 4566667554 554 44799999999999999875
No 272
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=39.49 E-value=34 Score=30.31 Aligned_cols=35 Identities=20% Similarity=0.239 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc
Q psy4394 151 IDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY 188 (286)
Q Consensus 151 ~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 188 (286)
..-+++.+.++ ++.+ =++.|.|.|+.+|..++...
T Consensus 88 hiGVLkaL~E~-gl~p--~vIsGTSaGAivAal~as~~ 122 (421)
T cd07230 88 HIGVLKALFEA-NLLP--RIISGSSAGSIVAAILCTHT 122 (421)
T ss_pred HHHHHHHHHHc-CCCC--CEEEEECHHHHHHHHHHcCC
Confidence 34566667665 5553 37999999999999888754
No 273
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=38.22 E-value=40 Score=26.84 Aligned_cols=34 Identities=21% Similarity=0.113 Sum_probs=24.7
Q ss_pred HHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc
Q psy4394 152 DAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY 188 (286)
Q Consensus 152 ~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 188 (286)
.-+++.+.++ +++ .-.+.|.|.|+.++..++...
T Consensus 16 ~GvL~aL~e~-gi~--~~~i~GtSaGAi~aa~~a~g~ 49 (221)
T cd07210 16 LGFLAALLEM-GLE--PSAISGTSAGALVGGLFASGI 49 (221)
T ss_pred HHHHHHHHHc-CCC--ceEEEEeCHHHHHHHHHHcCC
Confidence 4456666555 554 447999999999999988643
No 274
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=37.68 E-value=98 Score=23.26 Aligned_cols=36 Identities=17% Similarity=0.174 Sum_probs=20.0
Q ss_pred CCcEEEEEeecChHHHHHHHhhc--CccEEEEeCCCCc
Q psy4394 166 PENIILYGQSIGTVPTIDLASRY--QVGAVILHSPLMS 201 (286)
Q Consensus 166 ~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~p~~~ 201 (286)
..+|+++|-|..|.+-+.++... .+..++=.+|.-.
T Consensus 68 gk~I~~yGA~~kg~tlln~~g~~~~~I~~vvD~np~K~ 105 (160)
T PF08484_consen 68 GKRIAGYGAGAKGNTLLNYFGLDNDLIDYVVDDNPLKQ 105 (160)
T ss_dssp T--EEEE---SHHHHHHHHHT--TTTS--EEES-GGGT
T ss_pred CCEEEEECcchHHHHHHHHhCCCcceeEEEEeCChhhc
Confidence 45899999999999888887764 5777777676443
No 275
>PRK10824 glutaredoxin-4; Provisional
Probab=36.96 E-value=1.5e+02 Score=20.90 Aligned_cols=79 Identities=14% Similarity=0.038 Sum_probs=42.1
Q ss_pred CCeEEEEecCCcccc-chhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCCChhhHHHHHHHHHHHHHHHhCCCCCc
Q psy4394 90 ARFTILFSHGNAVDI-GQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSEKNLYADIDAAWNTLRTRYGISPEN 168 (286)
Q Consensus 90 ~~p~vv~~HG~~~~~-~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~ 168 (286)
..++|||..|..... --+...+..+....|...-.+|. -. + .++...+.......-++ +
T Consensus 14 ~~~Vvvf~Kg~~~~p~Cpyc~~ak~lL~~~~i~~~~idi-----~~-----------d--~~~~~~l~~~sg~~TVP--Q 73 (115)
T PRK10824 14 ENPILLYMKGSPKLPSCGFSAQAVQALSACGERFAYVDI-----LQ-----------N--PDIRAELPKYANWPTFP--Q 73 (115)
T ss_pred cCCEEEEECCCCCCCCCchHHHHHHHHHHcCCCceEEEe-----cC-----------C--HHHHHHHHHHhCCCCCC--e
Confidence 568999999854321 12333444444444544444555 10 1 12233333332222233 8
Q ss_pred EEEEEeecChHHHHHHHhhc
Q psy4394 169 IILYGQSIGTVPTIDLASRY 188 (286)
Q Consensus 169 i~l~G~S~Gg~~a~~~a~~~ 188 (286)
|++-|...||.--+..+.+.
T Consensus 74 IFI~G~~IGG~ddl~~l~~~ 93 (115)
T PRK10824 74 LWVDGELVGGCDIVIEMYQR 93 (115)
T ss_pred EEECCEEEcChHHHHHHHHC
Confidence 99999999998666555443
No 276
>COG2312 Erythromycin esterase homolog [General function prediction only]
Probab=36.29 E-value=53 Score=28.68 Aligned_cols=88 Identities=16% Similarity=0.129 Sum_probs=48.8
Q ss_pred cCCccccchhhHHHHhhccccceeEEEeeccCcC------CCCccCCCCCCChhh---H---HHHHHHHHHHHHHHhCC-
Q psy4394 98 HGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYD------YSGYGISTGRPSEKN---L---YADIDAAWNTLRTRYGI- 164 (286)
Q Consensus 98 HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~------~~G~G~s~~~~~~~~---~---~~d~~~~~~~l~~~~~~- 164 (286)
||.+.....-..+++.|.++.||.+++++---.+ +--+|..+......+ + ..++.++++|+++...-
T Consensus 55 HGt~e~~~~k~rm~r~Lvee~Gf~~iA~EA~~~d~~av~~Yv~~~~~d~~~~~~~~~~~~Wr~~~v~~lv~wlr~~na~r 134 (405)
T COG2312 55 HGTGEFFAFKARMFRALVEELGFRAIAFEADFPDAQAVNRYVRGGGDDLREAMDGFIFWVWRRAEVRDLVEWLREFNAAR 134 (405)
T ss_pred CCccHHHHHHHHHHHHHHHHhCcceEEeccCcHHHHHHHHHHhccCCChHHHHhccchhhhhHHHHHHHHHHHHHHhccC
Confidence 6665544555577888888999999998641000 011111111111111 1 26889999999887421
Q ss_pred -CCCcEEEEEee---cChHHHHHHH
Q psy4394 165 -SPENIILYGQS---IGTVPTIDLA 185 (286)
Q Consensus 165 -~~~~i~l~G~S---~Gg~~a~~~a 185 (286)
-..++.++|.- .+|.++...+
T Consensus 135 ~~~~~~~f~g~D~~~~n~~~~~~~~ 159 (405)
T COG2312 135 SAGPQVGFYGFDAQMENGSAAALRA 159 (405)
T ss_pred CcccccceeeccccccccchHHHHh
Confidence 12467777764 4555554443
No 277
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=35.91 E-value=51 Score=27.35 Aligned_cols=32 Identities=22% Similarity=0.320 Sum_probs=22.5
Q ss_pred HHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHh
Q psy4394 152 DAAWNTLRTRYGISPENIILYGQSIGTVPTIDLAS 186 (286)
Q Consensus 152 ~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~ 186 (286)
.++.+.++ ..|+. +-.++|||+|-+.|+.++.
T Consensus 70 ~a~~~~l~-~~Gi~--p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 70 VALARLWR-SWGVR--PDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred HHHHHHHH-HcCCc--ccEEEecCHHHHHHHHHhC
Confidence 34445453 44665 6689999999998887764
No 278
>PRK12467 peptide synthase; Provisional
Probab=35.19 E-value=1.3e+02 Score=35.29 Aligned_cols=86 Identities=9% Similarity=-0.048 Sum_probs=48.9
Q ss_pred CeEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccCCC-CCCChhhHHHHHHHHHHHHHHHhCCCCCcE
Q psy4394 91 RFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGIST-GRPSEKNLYADIDAAWNTLRTRYGISPENI 169 (286)
Q Consensus 91 ~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~-~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i 169 (286)
.+.++..|...+....+......+.. +..++.+.. ++.-... .............+.+.+... ..+.
T Consensus 3692 ~~~l~~~h~~~r~~~~~~~l~~~l~~--~~~~~~l~~-----~~~~~d~~~~~~~~~~~~~y~~~~~~~~~-----~~p~ 3759 (3956)
T PRK12467 3692 FPALFCRHEGLGTVFDYEPLAVILEG--DRHVLGLTC-----RHLLDDGWQDTSLQAMAVQYADYILWQQA-----KGPY 3759 (3956)
T ss_pred ccceeeechhhcchhhhHHHHHHhCC--CCcEEEEec-----cccccccCCccchHHHHHHHHHHHHHhcc-----CCCe
Confidence 35689999877765544444444432 457777765 4332111 112223333333333333322 2378
Q ss_pred EEEEeecChHHHHHHHhhc
Q psy4394 170 ILYGQSIGTVPTIDLASRY 188 (286)
Q Consensus 170 ~l~G~S~Gg~~a~~~a~~~ 188 (286)
.+.|+|+||.++..++..-
T Consensus 3760 ~l~g~s~g~~~a~~~~~~l 3778 (3956)
T PRK12467 3760 GLLGWSLGGTLARLVAELL 3778 (3956)
T ss_pred eeeeeecchHHHHHHHHHH
Confidence 9999999999998887653
No 279
>KOG2872|consensus
Probab=35.11 E-value=40 Score=27.96 Aligned_cols=77 Identities=16% Similarity=0.227 Sum_probs=42.6
Q ss_pred CCeEEEEecCCccccchhhHHHHhhccccceeEEEeeccCc--CCCC-ccCC---CCCCChhh---HHHHHHHHHHHHHH
Q psy4394 90 ARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGY--DYSG-YGIS---TGRPSEKN---LYADIDAAWNTLRT 160 (286)
Q Consensus 90 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~--~~~G-~G~s---~~~~~~~~---~~~d~~~~~~~l~~ 160 (286)
.-|.|+|.-|.++ .+..++ ..||.|+..|+.-. +.|- .|.. .+..+... ..+.+...+....+
T Consensus 251 ~vPmi~fakG~g~-------~Le~l~-~tG~DVvgLDWTvdp~ear~~~g~~VtlQGNlDP~~ly~s~e~it~~v~~mv~ 322 (359)
T KOG2872|consen 251 PVPMILFAKGSGG-------ALEELA-QTGYDVVGLDWTVDPAEARRRVGNRVTLQGNLDPGVLYGSKEEITQLVKQMVK 322 (359)
T ss_pred CCceEEEEcCcch-------HHHHHH-hcCCcEEeecccccHHHHHHhhCCceEEecCCChHHhcCCHHHHHHHHHHHHH
Confidence 3489999999765 556676 45999999998311 0000 0110 01111111 12455666666666
Q ss_pred HhCCCCCcEEEEEee
Q psy4394 161 RYGISPENIILYGQS 175 (286)
Q Consensus 161 ~~~~~~~~i~l~G~S 175 (286)
.+| ...-|.=.||-
T Consensus 323 ~fG-~~ryI~NLGHG 336 (359)
T KOG2872|consen 323 DFG-KSRYIANLGHG 336 (359)
T ss_pred HhC-ccceEEecCCC
Confidence 666 33456666764
No 280
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=33.98 E-value=55 Score=26.58 Aligned_cols=35 Identities=17% Similarity=0.073 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHhC-CCCCcEEEEEeecChHHHHHHHhh
Q psy4394 151 IDAAWNTLRTRYG-ISPENIILYGQSIGTVPTIDLASR 187 (286)
Q Consensus 151 ~~~~~~~l~~~~~-~~~~~i~l~G~S~Gg~~a~~~a~~ 187 (286)
..-+++.++++.. +.. . .+.|.|+|+.+|..++..
T Consensus 15 h~GVl~aL~e~g~~~~~-d-~i~GtSAGAl~aa~~a~g 50 (245)
T cd07218 15 HVGVAVCLKKYAPHLLL-N-KISGASAGALAACCLLCD 50 (245)
T ss_pred HHHHHHHHHHhCcccCC-C-eEEEEcHHHHHHHHHHhC
Confidence 4456677777631 112 2 399999999999988764
No 281
>TIGR02690 resist_ArsH arsenical resistance protein ArsH. Members of this protein family occur in arsenate resistance operons that include at least two different types of arsenate reductase. ArsH is not required for arsenate resistance in some systems. This family belongs to the larger family of NADPH-dependent FMN reductases (Pfam model pfam03358). The function of ArsH is not known.
Probab=33.88 E-value=87 Score=24.97 Aligned_cols=30 Identities=7% Similarity=0.008 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHh----CCCCCcEEEEEeecChHH
Q psy4394 150 DIDAAWNTLRTRY----GISPENIILYGQSIGTVP 180 (286)
Q Consensus 150 d~~~~~~~l~~~~----~~~~~~i~l~G~S~Gg~~ 180 (286)
-+..++||+.... .+..+++.++|.| ||..
T Consensus 108 ~LKNaiDwls~~~~~~~~~~~KpvaivgaS-gg~~ 141 (219)
T TIGR02690 108 SQKDQIDWIPLSVGPVRPTQGKTLAVMQVS-GGSQ 141 (219)
T ss_pred HHHHHHHhcccCcccccccCCCcEEEEEeC-CcHh
Confidence 3456777876532 2455689999999 5433
No 282
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=33.69 E-value=1.6e+02 Score=20.18 Aligned_cols=83 Identities=16% Similarity=0.194 Sum_probs=44.5
Q ss_pred hhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCCChhhHHHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHH--HH
Q psy4394 106 QMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSEKNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPT--ID 183 (286)
Q Consensus 106 ~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a--~~ 183 (286)
.....+..+....|+-.=.+.+ +..|.+..........+-=...++.+.+.+ +..+++++|-|--.-.- ..
T Consensus 11 nly~~l~~Fl~~~~~P~G~~~L-----r~~~~~~~~~~~~~~~~~K~~~i~~i~~~f--P~~kfiLIGDsgq~DpeiY~~ 83 (100)
T PF09949_consen 11 NLYPFLRDFLRRNGFPAGPLLL-----RDYGPSLSGLFKSGAEEHKRDNIERILRDF--PERKFILIGDSGQHDPEIYAE 83 (100)
T ss_pred HHHHHHHHHHHhcCCCCCceEc-----ccCCccccccccCCchhHHHHHHHHHHHHC--CCCcEEEEeeCCCcCHHHHHH
Confidence 4445555555555666666666 666443322111111112234455555554 34599999999877433 33
Q ss_pred HHhhc--CccEEEE
Q psy4394 184 LASRY--QVGAVIL 195 (286)
Q Consensus 184 ~a~~~--~i~~~v~ 195 (286)
+|.++ +|.++.+
T Consensus 84 ia~~~P~~i~ai~I 97 (100)
T PF09949_consen 84 IARRFPGRILAIYI 97 (100)
T ss_pred HHHHCCCCEEEEEE
Confidence 45555 6666543
No 283
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=33.11 E-value=56 Score=24.73 Aligned_cols=34 Identities=26% Similarity=0.248 Sum_probs=24.9
Q ss_pred HHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc
Q psy4394 152 DAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY 188 (286)
Q Consensus 152 ~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 188 (286)
.-+++.+.++ +++ .=.+.|.|.|+.++..++...
T Consensus 16 ~Gvl~~L~e~-g~~--~d~i~GtSaGAi~aa~~a~g~ 49 (175)
T cd07228 16 IGVLRALEEE-GIE--IDIIAGSSIGALVGALYAAGH 49 (175)
T ss_pred HHHHHHHHHC-CCC--eeEEEEeCHHHHHHHHHHcCC
Confidence 4456666554 443 457999999999999888765
No 284
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=32.54 E-value=58 Score=20.65 Aligned_cols=34 Identities=9% Similarity=0.184 Sum_probs=20.4
Q ss_pred CCeEEEEecCCccccchhhHHHHhhccccceeEEEe
Q psy4394 90 ARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSY 125 (286)
Q Consensus 90 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~ 125 (286)
..|.++++||+... ....++...+.+.|+.++.+
T Consensus 30 ~~~~~~lvhGga~~--GaD~iA~~wA~~~gv~~~~~ 63 (71)
T PF10686_consen 30 RHPDMVLVHGGAPK--GADRIAARWARERGVPVIRF 63 (71)
T ss_pred hCCCEEEEECCCCC--CHHHHHHHHHHHCCCeeEEe
Confidence 34678899997721 23344555555667766654
No 285
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=32.48 E-value=74 Score=22.48 Aligned_cols=32 Identities=19% Similarity=0.204 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHH
Q psy4394 149 ADIDAAWNTLRTRYGISPENIILYGQSIGTVPTI 182 (286)
Q Consensus 149 ~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~ 182 (286)
.+..+.+.|....++++ .++++||+--|++..
T Consensus 43 ~~~~~sl~~av~~l~v~--~ivV~gHt~CG~v~a 74 (119)
T cd00382 43 LDVLASLEYAVEVLGVK--HIIVCGHTDCGAVKA 74 (119)
T ss_pred ccHHHHHHHHHHhhCCC--EEEEEccCCCcHHHH
Confidence 35677788888887766 999999987776553
No 286
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=32.37 E-value=35 Score=27.90 Aligned_cols=13 Identities=46% Similarity=0.997 Sum_probs=11.5
Q ss_pred CCcEEEEEeecCh
Q psy4394 166 PENIILYGQSIGT 178 (286)
Q Consensus 166 ~~~i~l~G~S~Gg 178 (286)
.+.|+++|||+|.
T Consensus 234 i~~I~i~GhSl~~ 246 (270)
T PF14253_consen 234 IDEIIIYGHSLGE 246 (270)
T ss_pred CCEEEEEeCCCch
Confidence 3599999999997
No 287
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=32.30 E-value=61 Score=26.94 Aligned_cols=30 Identities=23% Similarity=0.268 Sum_probs=21.0
Q ss_pred HHHHHHHHhCCCCCcEEEEEeecChHHHHHHHh
Q psy4394 154 AWNTLRTRYGISPENIILYGQSIGTVPTIDLAS 186 (286)
Q Consensus 154 ~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~ 186 (286)
+.+.+++. ++. +-.++|||+|=+.|+.++.
T Consensus 66 l~~~l~~~-g~~--P~~v~GhS~GE~aAa~~aG 95 (295)
T TIGR03131 66 AWRALLAL-LPR--PSAVAGYSVGEYAAAVVAG 95 (295)
T ss_pred HHHHHHhc-CCC--CcEEeecCHHHHHHHHHhC
Confidence 33444333 554 7899999999988887764
No 288
>PF04260 DUF436: Protein of unknown function (DUF436) ; InterPro: IPR006340 Members of this family are uncharacterised proteins of about 180 amino acids from the Bacillus/Clostridium group of Gram-positive bacteria, found in no more than one copy per genome. ; PDB: 1V8D_C.
Probab=32.28 E-value=71 Score=24.11 Aligned_cols=26 Identities=23% Similarity=0.381 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHhCCCCCcEEEEEee
Q psy4394 150 DIDAAWNTLRTRYGISPENIILYGQS 175 (286)
Q Consensus 150 d~~~~~~~l~~~~~~~~~~i~l~G~S 175 (286)
++..+++.+.+..++.+..+.++|-|
T Consensus 2 q~~~~~~El~~~a~l~~g~i~VvGcS 27 (172)
T PF04260_consen 2 QLRQALEELLEQANLKPGQIFVVGCS 27 (172)
T ss_dssp -HHHHHHHHHHHS---TT-EEEEEE-
T ss_pred hHHHHHHHHHHhcCCCCCCEEEEeee
Confidence 56778888888888888999999999
No 289
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=32.21 E-value=81 Score=26.68 Aligned_cols=42 Identities=19% Similarity=0.157 Sum_probs=27.7
Q ss_pred hhhHHHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHh
Q psy4394 144 EKNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLAS 186 (286)
Q Consensus 144 ~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~ 186 (286)
.+....--.++++-+.++.. ...+.++.|||+|=+.|+..+.
T Consensus 63 QPal~~~s~a~~~~l~~~~~-~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 63 QPALLLVSLAAYRVLAEQGL-GVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred hHHHHHHHHHHHHHHHHhcC-CCCCceeecccHhHHHHHHHcc
Confidence 34444344455555656542 3447799999999999988775
No 290
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=32.18 E-value=58 Score=24.60 Aligned_cols=34 Identities=26% Similarity=0.300 Sum_probs=25.0
Q ss_pred HHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc
Q psy4394 152 DAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY 188 (286)
Q Consensus 152 ~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 188 (286)
.-+++++.++ ++. .=.+.|.|.|+.+|..++...
T Consensus 16 ~Gvl~~L~~~-~~~--~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 16 IGVLKALEEA-GIP--IDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred HHHHHHHHHc-CCC--eeEEEEECHHHHHHHHHHcCC
Confidence 5566667655 443 347999999999999988654
No 291
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=31.57 E-value=50 Score=30.36 Aligned_cols=28 Identities=18% Similarity=0.138 Sum_probs=21.3
Q ss_pred HHHHhCCCCCcEEEEEeecChHHHHHHHhh
Q psy4394 158 LRTRYGISPENIILYGQSIGTVPTIDLASR 187 (286)
Q Consensus 158 l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 187 (286)
+.+..|+. +-+++|||+|=+.|+..|.-
T Consensus 258 l~~~~GI~--Pdav~GHSlGE~aAa~aAGv 285 (538)
T TIGR02816 258 LCDEFAIK--PDFALGYSKGEASMWASLGV 285 (538)
T ss_pred HHHhcCCC--CCEEeecCHHHHHHHHHhCC
Confidence 33456776 55999999999888877753
No 292
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=31.47 E-value=38 Score=28.56 Aligned_cols=32 Identities=28% Similarity=0.347 Sum_probs=22.2
Q ss_pred HHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHh
Q psy4394 152 DAAWNTLRTRYGISPENIILYGQSIGTVPTIDLAS 186 (286)
Q Consensus 152 ~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~ 186 (286)
.++.+.++ ..|+. +-+++|||+|=+.|+.++.
T Consensus 72 ~al~~~l~-~~Gi~--P~~v~GhSlGE~aA~~aaG 103 (318)
T PF00698_consen 72 VALARLLR-SWGIK--PDAVIGHSLGEYAALVAAG 103 (318)
T ss_dssp HHHHHHHH-HTTHC--ESEEEESTTHHHHHHHHTT
T ss_pred hhhhhhhc-ccccc--cceeeccchhhHHHHHHCC
Confidence 34455554 34655 6789999999988887663
No 293
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=31.45 E-value=1.3e+02 Score=22.80 Aligned_cols=51 Identities=16% Similarity=0.333 Sum_probs=37.2
Q ss_pred ccceeEEEeeccCcCCCCccCCCCCCChhhHHHHHHHHHHHHHHHhCCCCCcEEEEEeecC
Q psy4394 117 RINCNIFSYDYSGYDYSGYGISTGRPSEKNLYADIDAAWNTLRTRYGISPENIILYGQSIG 177 (286)
Q Consensus 117 ~~g~~vi~~d~~~~~~~G~G~s~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~G 177 (286)
+.|+..+.+|. -+. --.+.......++.++++.+++.++.+ ++.|+--|.|
T Consensus 38 ~~Gik~li~Dk-----DNT---L~~~~~~~i~~~~~~~~~~l~~~~~~~--~v~IvSNsaG 88 (168)
T PF09419_consen 38 KKGIKALIFDK-----DNT---LTPPYEDEIPPEYAEWLNELKKQFGKD--RVLIVSNSAG 88 (168)
T ss_pred hcCceEEEEcC-----CCC---CCCCCcCcCCHHHHHHHHHHHHHCCCC--eEEEEECCCC
Confidence 55999999999 322 112334455578888999999887533 8999999987
No 294
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=30.47 E-value=64 Score=26.13 Aligned_cols=37 Identities=14% Similarity=0.058 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHhCCCC--CcEEEEEeecChHHHHHHHhhc
Q psy4394 151 IDAAWNTLRTRYGISP--ENIILYGQSIGTVPTIDLASRY 188 (286)
Q Consensus 151 ~~~~~~~l~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~ 188 (286)
..-+++.+.++ ++.. +--.+.|.|.|+.++..++...
T Consensus 14 h~GVl~~L~e~-g~~l~~~~~~i~GtSAGAl~aa~~a~g~ 52 (243)
T cd07204 14 HVGVASALREH-APRLLQNARRIAGASAGAIVAAVVLCGV 52 (243)
T ss_pred HHHHHHHHHHc-CcccccCCCEEEEEcHHHHHHHHHHhCC
Confidence 34556666665 3221 1138999999999999888654
No 295
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=29.87 E-value=2.7e+02 Score=21.66 Aligned_cols=38 Identities=8% Similarity=0.023 Sum_probs=26.5
Q ss_pred CCCeEEEEecCCccccch-hhHH-HHhhccccceeEEEeec
Q psy4394 89 NARFTILFSHGNAVDIGQ-MSSF-FTGLGSRINCNIFSYDY 127 (286)
Q Consensus 89 ~~~p~vv~~HG~~~~~~~-~~~~-~~~l~~~~g~~vi~~d~ 127 (286)
+.++.+|++-|..++... .... ...|. +.|++++..|-
T Consensus 20 ~~~~~viW~TGLSGsGKSTiA~ale~~L~-~~G~~~y~LDG 59 (197)
T COG0529 20 GQKGAVIWFTGLSGSGKSTIANALEEKLF-AKGYHVYLLDG 59 (197)
T ss_pred CCCCeEEEeecCCCCCHHHHHHHHHHHHH-HcCCeEEEecC
Confidence 456889999998876533 3333 34444 55999999986
No 296
>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]
Probab=29.57 E-value=2.2e+02 Score=23.98 Aligned_cols=55 Identities=15% Similarity=0.237 Sum_probs=39.9
Q ss_pred hHHHHHHHHHHHHHHHhCC--CCCcEEEEEeecChHHHHHHHhhc----CccEEEEeCCCC
Q psy4394 146 NLYADIDAAWNTLRTRYGI--SPENIILYGQSIGTVPTIDLASRY----QVGAVILHSPLM 200 (286)
Q Consensus 146 ~~~~d~~~~~~~l~~~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~----~i~~~v~~~p~~ 200 (286)
+....+..-++|.++...+ .|+++.++|.|-|=.+|.+++... .--++..--|..
T Consensus 19 GCe~nV~~QI~y~k~~gp~~ngPKkVLviGaSsGyGLa~RIsaaFG~gAdTiGVffE~pgt 79 (398)
T COG3007 19 GCEANVLQQIDYVKAAGPIKNGPKKVLVIGASSGYGLAARISAAFGPGADTIGVFFERPGT 79 (398)
T ss_pred cHHHHHHHHHHHHHhcCCccCCCceEEEEecCCcccHHHHHHHHhCCCCceeeEEeecCCc
Confidence 3446778888999888654 367999999999999999988776 333444444443
No 297
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=29.08 E-value=2.9e+02 Score=21.74 Aligned_cols=38 Identities=16% Similarity=0.168 Sum_probs=27.0
Q ss_pred CCeEEEEecCCccccchhhHHHHhhcccc-ceeEEEeec
Q psy4394 90 ARFTILFSHGNAVDIGQMSSFFTGLGSRI-NCNIFSYDY 127 (286)
Q Consensus 90 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~~-g~~vi~~d~ 127 (286)
..+.|+|+.=.+.....+...+.....+. |+.+..++.
T Consensus 30 ~~~~i~~IptAs~~~~~~~~~~~~a~~~l~G~~~~~~~~ 68 (212)
T cd03146 30 ARPKVLFVPTASGDRDEYTARFYAAFESLRGVEVSHLHL 68 (212)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHHhhccCcEEEEEec
Confidence 45678888877665556666666666677 888888875
No 298
>cd00883 beta_CA_cladeA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=29.01 E-value=78 Score=24.34 Aligned_cols=33 Identities=12% Similarity=0.003 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHH
Q psy4394 150 DIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDL 184 (286)
Q Consensus 150 d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~ 184 (286)
+..+.++|....+++. .|+++|||-=|++...+
T Consensus 66 ~~~asleyAv~~L~v~--~IvV~GHs~CGav~a~~ 98 (182)
T cd00883 66 NCLSVLQYAVDVLKVK--HIIVCGHYGCGGVKAAL 98 (182)
T ss_pred chhhhHHHHHHhcCCC--EEEEecCCCchHHHHHH
Confidence 3678889988888866 99999999877766544
No 299
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=28.94 E-value=62 Score=25.54 Aligned_cols=34 Identities=26% Similarity=0.323 Sum_probs=24.7
Q ss_pred HHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc
Q psy4394 152 DAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY 188 (286)
Q Consensus 152 ~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 188 (286)
.-+++.+.+. ++. -=.+.|.|.|+.+|..++...
T Consensus 14 ~Gvl~aL~e~-g~~--~d~i~GtS~GAl~aa~~a~~~ 47 (215)
T cd07209 14 AGVLKALAEA-GIE--PDIISGTSIGAINGALIAGGD 47 (215)
T ss_pred HHHHHHHHHc-CCC--CCEEEEECHHHHHHHHHHcCC
Confidence 4456666665 443 448999999999999888754
No 300
>KOG1199|consensus
Probab=28.33 E-value=2.7e+02 Score=21.38 Aligned_cols=80 Identities=15% Similarity=0.211 Sum_probs=50.8
Q ss_pred CeEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccCCC------CC----CChhhHHHHHHHHHHHHHH
Q psy4394 91 RFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGIST------GR----PSEKNLYADIDAAWNTLRT 160 (286)
Q Consensus 91 ~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~------~~----~~~~~~~~d~~~~~~~l~~ 160 (286)
+..|-++.|+.+ +.-....+.++++ |..|+..|+ |..+..+ +. +......+|+.+++...+.
T Consensus 8 kglvalvtggas--glg~ataerlakq-gasv~lldl-----p~skg~~vakelg~~~vf~padvtsekdv~aala~ak~ 79 (260)
T KOG1199|consen 8 KGLVALVTGGAS--GLGKATAERLAKQ-GASVALLDL-----PQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKA 79 (260)
T ss_pred cCeeEEeecCcc--cccHHHHHHHHhc-CceEEEEeC-----CcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHh
Confidence 455667777654 2334566777744 999999999 7554322 11 2222335799999999998
Q ss_pred HhCCCCCcEEEEEeecChHHHH
Q psy4394 161 RYGISPENIILYGQSIGTVPTI 182 (286)
Q Consensus 161 ~~~~~~~~i~l~G~S~Gg~~a~ 182 (286)
+++ |+-+.=.+.|-..|.
T Consensus 80 kfg----rld~~vncagia~a~ 97 (260)
T KOG1199|consen 80 KFG----RLDALVNCAGIAYAF 97 (260)
T ss_pred hcc----ceeeeeeccceeeee
Confidence 876 555555666655443
No 301
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=28.15 E-value=80 Score=23.41 Aligned_cols=33 Identities=24% Similarity=0.201 Sum_probs=22.7
Q ss_pred HHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHH
Q psy4394 152 DAAWNTLRTRYGISPENIILYGQSIGTVPTIDLA 185 (286)
Q Consensus 152 ~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a 185 (286)
.-+++.+.++ ++...--.+.|.|.|+.++..++
T Consensus 14 ~gvl~~l~~~-~~~~~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 14 AGVLSALAER-GLLDCVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred HHHHHHHHHh-CCccCCCEEEEEcHHHHHHHHHh
Confidence 4455666554 33223557899999999998888
No 302
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=27.89 E-value=4.5e+02 Score=23.60 Aligned_cols=66 Identities=15% Similarity=0.275 Sum_probs=43.6
Q ss_pred ccccceeEEEeeccCcCCCCccCCCCCCChhhHHHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc----Cc
Q psy4394 115 GSRINCNIFSYDYSGYDYSGYGISTGRPSEKNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY----QV 190 (286)
Q Consensus 115 ~~~~g~~vi~~d~~~~~~~G~G~s~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~----~i 190 (286)
++..+|.|+.+|= .|.=. ....+.++ +..+.+. +.|+.+.++=.|+=|.-|...|..+ .+
T Consensus 178 ak~~~~DvvIvDT-----AGRl~-----ide~Lm~E----l~~Ik~~--~~P~E~llVvDam~GQdA~~~A~aF~e~l~i 241 (451)
T COG0541 178 AKEEGYDVVIVDT-----AGRLH-----IDEELMDE----LKEIKEV--INPDETLLVVDAMIGQDAVNTAKAFNEALGI 241 (451)
T ss_pred HHHcCCCEEEEeC-----CCccc-----ccHHHHHH----HHHHHhh--cCCCeEEEEEecccchHHHHHHHHHhhhcCC
Confidence 3355789999988 44211 12222333 3333333 3577999999999999999988776 88
Q ss_pred cEEEEe
Q psy4394 191 GAVILH 196 (286)
Q Consensus 191 ~~~v~~ 196 (286)
.++|+.
T Consensus 242 tGvIlT 247 (451)
T COG0541 242 TGVILT 247 (451)
T ss_pred ceEEEE
Confidence 888874
No 303
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=27.87 E-value=61 Score=27.23 Aligned_cols=33 Identities=21% Similarity=0.245 Sum_probs=24.2
Q ss_pred HHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhh
Q psy4394 152 DAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASR 187 (286)
Q Consensus 152 ~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 187 (286)
.-+++.|.+. ++. .-.+.|.|+|+.++..+|..
T Consensus 27 iGVl~aL~e~-gi~--~~~iaGtS~GAiva~l~A~g 59 (306)
T COG1752 27 IGVLKALEEA-GIP--IDVIAGTSAGAIVAALYAAG 59 (306)
T ss_pred HHHHHHHHHc-CCC--ccEEEecCHHHHHHHHHHcC
Confidence 3445555554 444 67899999999999999874
No 304
>PLN03006 carbonate dehydratase
Probab=27.16 E-value=87 Score=26.32 Aligned_cols=32 Identities=19% Similarity=0.116 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHH
Q psy4394 151 IDAAWNTLRTRYGISPENIILYGQSIGTVPTIDL 184 (286)
Q Consensus 151 ~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~ 184 (286)
..+.++|....+++. .|+|+|||-=|++...+
T Consensus 158 ~~aSLEYAV~~L~V~--~IVV~GHs~CGaV~Aal 189 (301)
T PLN03006 158 TKAALEFSVNTLNVE--NILVIGHSRCGGIQALM 189 (301)
T ss_pred hhhhHHHHHHHhCCC--EEEEecCCCchHHHHHh
Confidence 678899999998876 99999999877666544
No 305
>KOG0855|consensus
Probab=27.15 E-value=1.9e+02 Score=22.00 Aligned_cols=59 Identities=10% Similarity=0.156 Sum_probs=39.0
Q ss_pred ccccEEEeccCCCEEEEEEEeecCCCCeEEEEecCCcccc------chhhHHHHhhccccceeEEEeec
Q psy4394 65 NIEGFFTRTSRGNRLACMFMKCSPNARFTILFSHGNAVDI------GQMSSFFTGLGSRINCNIFSYDY 127 (286)
Q Consensus 65 ~~~~~~~~~~~g~~l~~~~~~~~~~~~p~vv~~HG~~~~~------~~~~~~~~~l~~~~g~~vi~~d~ 127 (286)
.+.++++...||..+...-+. +++|+|+|+.-..+.. -.++.-++.+- ..|+.|+.+..
T Consensus 68 ~iPD~tL~dedg~sisLkkit---~nk~vV~f~YP~asTPGCTkQaCgFRDnY~k~k-ka~aeV~GlS~ 132 (211)
T KOG0855|consen 68 AIPDFTLKDEDGKSISLKKIT---GNKPVVLFFYPAASTPGCTKQACGFRDNYEKFK-KAGAEVIGLSG 132 (211)
T ss_pred cCCCcccccCCCCeeeeeeec---CCCcEEEEEeccCCCCCcccccccccccHHHHh-hcCceEEeecc
Confidence 356678888899888776663 3458899887644322 23555566654 44888888755
No 306
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=26.92 E-value=70 Score=27.11 Aligned_cols=28 Identities=14% Similarity=0.081 Sum_probs=25.9
Q ss_pred CCCEEEEecCCCCccChhHHHHHHHHCC
Q psy4394 247 TSPVLVIHGTEDEVIDLSHGIAIYERCP 274 (286)
Q Consensus 247 ~~Pvlii~G~~D~~v~~~~~~~l~~~~~ 274 (286)
..+||+..|..|.+|+.-..+++.++++
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~ 260 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLN 260 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcC
Confidence 4799999999999999999999999885
No 307
>cd03129 GAT1_Peptidase_E_like Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E and, extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Peptidase E and cyanophycinases are thought to have a Ser-His-Glu catalytic triad which differs from
Probab=26.22 E-value=3.2e+02 Score=21.34 Aligned_cols=17 Identities=18% Similarity=0.300 Sum_probs=14.4
Q ss_pred cEEEEEeecChHHHHHH
Q psy4394 168 NIILYGQSIGTVPTIDL 184 (286)
Q Consensus 168 ~i~l~G~S~Gg~~a~~~ 184 (286)
...++|.|.|+.+....
T Consensus 114 G~v~~G~SAGA~~~~~~ 130 (210)
T cd03129 114 GVVIGGTSAGAAVMGET 130 (210)
T ss_pred CCeEEEcCHHHHHhhhc
Confidence 67899999999887764
No 308
>TIGR00632 vsr DNA mismatch endonuclease Vsr. All proteins in this family for which functions are known are G:T mismatch endonucleases that function in a specialized mismatch repair process used usually to repair G:T mismatches in specific sections of the genome. This family was based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). Members of this family typically are found near to a DNA cytosine methyltransferase.
Probab=25.85 E-value=1.2e+02 Score=21.50 Aligned_cols=11 Identities=27% Similarity=0.498 Sum_probs=8.7
Q ss_pred CCeEEEEecCC
Q psy4394 90 ARFTILFSHGN 100 (286)
Q Consensus 90 ~~p~vv~~HG~ 100 (286)
+..++|++||-
T Consensus 55 ~~klaIfVDGc 65 (117)
T TIGR00632 55 EYRCVIFIHGC 65 (117)
T ss_pred CCCEEEEEccc
Confidence 45789999885
No 309
>KOG2385|consensus
Probab=25.79 E-value=2.7e+02 Score=25.55 Aligned_cols=35 Identities=20% Similarity=0.256 Sum_probs=23.9
Q ss_pred CCcEEEEEeecChHHHHHHHh----hc---CccEEEEeCCCC
Q psy4394 166 PENIILYGQSIGTVPTIDLAS----RY---QVGAVILHSPLM 200 (286)
Q Consensus 166 ~~~i~l~G~S~Gg~~a~~~a~----~~---~i~~~v~~~p~~ 200 (286)
..+|.|+|+|+|+.+...... +. -|..+++++...
T Consensus 446 ~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv 487 (633)
T KOG2385|consen 446 NRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPV 487 (633)
T ss_pred CCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCc
Confidence 358999999999987764333 22 566777775433
No 310
>TIGR01440 conserved hypothetical protein TIGR01440. Members of this family are uncharacterized proteins of about 180 amino acids from the Bacillus/Clostridium group of Gram-positive bacteria, found in no more than one copy per genome.
Probab=25.53 E-value=1e+02 Score=23.28 Aligned_cols=26 Identities=12% Similarity=0.311 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHhCCCCCcEEEEEee
Q psy4394 150 DIDAAWNTLRTRYGISPENIILYGQS 175 (286)
Q Consensus 150 d~~~~~~~l~~~~~~~~~~i~l~G~S 175 (286)
++..+++.+.+..++.+..+.++|-|
T Consensus 2 ~~~~~~~El~~~a~l~~g~i~VvGcS 27 (172)
T TIGR01440 2 QLTTVLEELKDASNLKKGDLFVIGCS 27 (172)
T ss_pred hHHHHHHHHHHhhCCCCCCEEEEecc
Confidence 45677888888888888999999999
No 311
>PF10566 Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: IPR019563 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is the 97th family of glycosidases, in this case bacterial. The central part of the GH97 family protein sequences represents a typical and complete (beta/alpha)8-barrel or catalytic TIM-barrel type domain. The N- and C-terminal parts of the sequences, mainly consisting of beta-strands, most probably form two additional non-catalytic domains with as yet unknown functions. The non-catalytic domains of glycosidases from the alpha-galactosidase and alpha-glucosidase superfamilies are also predominantly composed of beta-strands, and at least some of these domains are involved in oligomerisation and carbohydrate binding. In all known glycosidases with the (beta-alpha)8-barrel fold, the amino acid residues at the active site are located on the C-termini of the beta-strands []. ; PDB: 2JKP_A 2JKE_A 2D73_B 2ZQ0_B 2JKA_A 3A24_A.
Probab=25.15 E-value=1.8e+02 Score=24.16 Aligned_cols=63 Identities=11% Similarity=0.033 Sum_probs=35.7
Q ss_pred HHHhhccccceeEEEeeccCcCCCCccCCCCCCChhhHHHHHHHHHHHHHHHhCCCCCcEEEEEeecCh
Q psy4394 110 FFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSEKNLYADIDAAWNTLRTRYGISPENIILYGQSIGT 178 (286)
Q Consensus 110 ~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg 178 (286)
.+-.++.+.|+.-+.+|- ||...+.+. ........-..|+.++++|.+++ ++ .|.|+.||-++
T Consensus 36 ~yIDfAa~~G~eYvlvD~-GW~~~~~~~-~~d~~~~~~~~dl~elv~Ya~~K-gV---gi~lw~~~~~~ 98 (273)
T PF10566_consen 36 RYIDFAAEMGIEYVLVDA-GWYGWEKDD-DFDFTKPIPDFDLPELVDYAKEK-GV---GIWLWYHSETG 98 (273)
T ss_dssp HHHHHHHHTT-SEEEEBT-TCCGS--TT-T--TT-B-TT--HHHHHHHHHHT-T----EEEEEEECCHT
T ss_pred HHHHHHHHcCCCEEEecc-ccccccccc-cccccccCCccCHHHHHHHHHHc-CC---CEEEEEeCCcc
Confidence 344455677999889986 442211111 11122222237999999999998 33 69999999884
No 312
>PRK05368 homoserine O-succinyltransferase; Provisional
Probab=25.06 E-value=1.9e+02 Score=24.47 Aligned_cols=38 Identities=3% Similarity=-0.045 Sum_probs=29.5
Q ss_pred hhhHHHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhh
Q psy4394 144 EKNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASR 187 (286)
Q Consensus 144 ~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 187 (286)
...+.+++..+++|++++ .+-++|-++|+.+++.+..-
T Consensus 117 dv~YW~El~~i~~w~~~~------~~s~LgICwGaQa~a~algG 154 (302)
T PRK05368 117 DVDYWDELKEILDWAKTH------VTSTLFICWAAQAALYHLYG 154 (302)
T ss_pred CCchHHHHHHHHHHHHHc------CCCEEEEcHHHHHHHHHcCC
Confidence 344467799999999876 45689999999988876543
No 313
>PF13728 TraF: F plasmid transfer operon protein
Probab=24.51 E-value=1.4e+02 Score=23.65 Aligned_cols=44 Identities=9% Similarity=0.147 Sum_probs=34.6
Q ss_pred CCeEEEEecCCccccchhhHHHHhhccccceeEEEeeccCcCCCCccCC
Q psy4394 90 ARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGIS 138 (286)
Q Consensus 90 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s 138 (286)
....++|+-|...-.....+.+..++++.|+.|+.++. -|.+..
T Consensus 121 ~~gL~~F~~~~C~~C~~~~pil~~~~~~yg~~v~~vs~-----DG~~~~ 164 (215)
T PF13728_consen 121 KYGLFFFYRSDCPYCQQQAPILQQFADKYGFSVIPVSL-----DGRPIP 164 (215)
T ss_pred CeEEEEEEcCCCchhHHHHHHHHHHHHHhCCEEEEEec-----CCCCCc
Confidence 44667777776666677888999999999999999999 666654
No 314
>cd00884 beta_CA_cladeB Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=23.74 E-value=1.2e+02 Score=23.66 Aligned_cols=34 Identities=18% Similarity=0.066 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHH
Q psy4394 150 DIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLA 185 (286)
Q Consensus 150 d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a 185 (286)
...+.++|....++++ .|+++|||-=|++...+.
T Consensus 72 ~~~asleyav~~l~v~--~ivV~GH~~Cgav~Aa~~ 105 (190)
T cd00884 72 GTSAAIEYAVAVLKVE--HIVVCGHSDCGGIRALLS 105 (190)
T ss_pred chhhhHHHHHHHhCCC--EEEEeCCCcchHHHHHhc
Confidence 3678888888888766 999999998776666543
No 315
>COG4475 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=23.65 E-value=1.7e+02 Score=21.82 Aligned_cols=30 Identities=13% Similarity=0.273 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHHHHhCCCCCcEEEEEeec
Q psy4394 147 LYADIDAAWNTLRTRYGISPENIILYGQSI 176 (286)
Q Consensus 147 ~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~ 176 (286)
..+|...+++.+.++..+....++++|-|-
T Consensus 4 l~k~~~~vl~d~~~~s~lk~g~lfvlG~St 33 (180)
T COG4475 4 LKKDTRTVLDDVQDQSELKQGQLFVLGLST 33 (180)
T ss_pred HHHHHHHHHHHHHHhhccCCCCEEEEecch
Confidence 457888999999998888889999999994
No 316
>KOG0780|consensus
Probab=23.59 E-value=5.2e+02 Score=22.94 Aligned_cols=64 Identities=25% Similarity=0.385 Sum_probs=35.2
Q ss_pred cccceeEEEeeccCcCCCCccCCCCCCChhhHHHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc----Ccc
Q psy4394 116 SRINCNIFSYDYSGYDYSGYGISTGRPSEKNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY----QVG 191 (286)
Q Consensus 116 ~~~g~~vi~~d~~~~~~~G~G~s~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~----~i~ 191 (286)
++.+|.++.+|- .|. .....++.++..++.+.+ .|+.++++=.+.=|..|...|... .|.
T Consensus 180 Kke~fdvIIvDT-----SGR-----h~qe~sLfeEM~~v~~ai------~Pd~vi~VmDasiGQaae~Qa~aFk~~vdvg 243 (483)
T KOG0780|consen 180 KKENFDVIIVDT-----SGR-----HKQEASLFEEMKQVSKAI------KPDEIIFVMDASIGQAAEAQARAFKETVDVG 243 (483)
T ss_pred HhcCCcEEEEeC-----CCc-----hhhhHHHHHHHHHHHhhc------CCCeEEEEEeccccHhHHHHHHHHHHhhccc
Confidence 355899999998 432 223344555555544444 355665554444444444444333 667
Q ss_pred EEEE
Q psy4394 192 AVIL 195 (286)
Q Consensus 192 ~~v~ 195 (286)
++|+
T Consensus 244 ~vIl 247 (483)
T KOG0780|consen 244 AVIL 247 (483)
T ss_pred eEEE
Confidence 7766
No 317
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=23.56 E-value=63 Score=24.24 Aligned_cols=21 Identities=29% Similarity=0.320 Sum_probs=16.2
Q ss_pred cEEEEEeecChHHHHHHHhhc
Q psy4394 168 NIILYGQSIGTVPTIDLASRY 188 (286)
Q Consensus 168 ~i~l~G~S~Gg~~a~~~a~~~ 188 (286)
--.+.|.|.||.+|+.++...
T Consensus 28 ~d~i~GtS~Gal~a~~~~~~~ 48 (204)
T PF01734_consen 28 FDVISGTSAGALNAALLALGY 48 (204)
T ss_dssp -SEEEEECCHHHHHHHHHTC-
T ss_pred ccEEEEcChhhhhHHHHHhCC
Confidence 447999999999998877653
No 318
>PF08394 Arc_trans_TRASH: Archaeal TRASH domain; InterPro: IPR013603 This region is found in the C terminus of a number of archaeal transcriptional regulators. It is thought to function as a metal-sensing regulatory module [].
Probab=23.56 E-value=26 Score=19.09 Aligned_cols=14 Identities=43% Similarity=1.004 Sum_probs=10.5
Q ss_pred eeecCCChhhhhhh
Q psy4394 11 LFCFPPCPSRIASK 24 (286)
Q Consensus 11 ~~~~~~~~~~~~~~ 24 (286)
.|||+.|...+..+
T Consensus 23 ~fCC~tC~~~fk~k 36 (37)
T PF08394_consen 23 YFCCPTCLSQFKKK 36 (37)
T ss_pred EEECHHHHHHHHhh
Confidence 58999888776544
No 319
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=23.55 E-value=4.6e+02 Score=22.24 Aligned_cols=102 Identities=13% Similarity=0.091 Sum_probs=53.0
Q ss_pred CCCeEEEEecCCcccc-chhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCCChhhHHHHHHHHHHHHHHHhCCCCC
Q psy4394 89 NARFTILFSHGNAVDI-GQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSEKNLYADIDAAWNTLRTRYGISPE 167 (286)
Q Consensus 89 ~~~p~vv~~HG~~~~~-~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~~~~~~~d~~~~~~~l~~~~~~~~~ 167 (286)
.+.|.|+++--..++. ...+...+.+.. ...|...|+. +.|-.....+..+..+.++.+.+.++++ | .
T Consensus 101 ~pdPkvLivapmsGH~aTLLR~TV~alLp--~~~vyitDW~--dAr~Vp~~~G~FdldDYIdyvie~~~~~----G---p 169 (415)
T COG4553 101 KPDPKVLIVAPMSGHYATLLRGTVEALLP--YHDVYITDWV--DARMVPLEAGHFDLDDYIDYVIEMINFL----G---P 169 (415)
T ss_pred CCCCeEEEEecccccHHHHHHHHHHHhcc--ccceeEeecc--ccceeecccCCccHHHHHHHHHHHHHHh----C---C
Confidence 4557788877766654 334556666654 4577888881 0011112223333333333333333322 3 2
Q ss_pred cEEEEEeecChHHHHHHHh---h--c--CccEEEEeCCCCc
Q psy4394 168 NIILYGQSIGTVPTIDLAS---R--Y--QVGAVILHSPLMS 201 (286)
Q Consensus 168 ~i~l~G~S~Gg~~a~~~a~---~--~--~i~~~v~~~p~~~ 201 (286)
++++++.++=+...+.+++ . + .-...+++++.+|
T Consensus 170 ~~hv~aVCQP~vPvLAAisLM~~~~~p~~PssMtlmGgPID 210 (415)
T COG4553 170 DAHVMAVCQPTVPVLAAISLMEEDGDPNVPSSMTLMGGPID 210 (415)
T ss_pred CCcEEEEecCCchHHHHHHHHHhcCCCCCCceeeeecCccc
Confidence 5788888888744433322 2 2 4466777766555
No 320
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=23.01 E-value=3.1e+02 Score=25.80 Aligned_cols=64 Identities=17% Similarity=0.208 Sum_probs=39.7
Q ss_pred CCCeEEEEecCCcccc---chhhHHHHhhccccceeEEEeeccCcCCCC--ccCCCCCCChhhHHHHHHHHHHHHHHHh
Q psy4394 89 NARFTILFSHGNAVDI---GQMSSFFTGLGSRINCNIFSYDYSGYDYSG--YGISTGRPSEKNLYADIDAAWNTLRTRY 162 (286)
Q Consensus 89 ~~~p~vv~~HG~~~~~---~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G--~G~s~~~~~~~~~~~d~~~~~~~l~~~~ 162 (286)
+-+..++++||..... .+...++..|. ..|..|-.+-+ ++ |+.+. .....+-+..+++|+.++.
T Consensus 549 ~i~~P~LliHG~~D~~v~~~q~~~~~~aL~-~~g~~~~~~~~-----p~e~H~~~~----~~~~~~~~~~~~~~~~~~~ 617 (620)
T COG1506 549 NIKTPLLLIHGEEDDRVPIEQAEQLVDALK-RKGKPVELVVF-----PDEGHGFSR----PENRVKVLKEILDWFKRHL 617 (620)
T ss_pred ccCCCEEEEeecCCccCChHHHHHHHHHHH-HcCceEEEEEe-----CCCCcCCCC----chhHHHHHHHHHHHHHHHh
Confidence 4456699999966433 34445555554 34777666666 54 44443 3455567788888888764
No 321
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=22.98 E-value=1.3e+02 Score=22.51 Aligned_cols=36 Identities=8% Similarity=-0.019 Sum_probs=22.8
Q ss_pred CeEEEEecCCccccch-hhHH-HHhhccccceeEEEeec
Q psy4394 91 RFTILFSHGNAVDIGQ-MSSF-FTGLGSRINCNIFSYDY 127 (286)
Q Consensus 91 ~p~vv~~HG~~~~~~~-~~~~-~~~l~~~~g~~vi~~d~ 127 (286)
+|.||++-|..++.-. .... ...|. ..|+.++.+|-
T Consensus 1 ~g~vIwltGlsGsGKtTlA~~L~~~L~-~~g~~~~~LDg 38 (156)
T PF01583_consen 1 KGFVIWLTGLSGSGKTTLARALERRLF-ARGIKVYLLDG 38 (156)
T ss_dssp S-EEEEEESSTTSSHHHHHHHHHHHHH-HTTS-EEEEEH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHH-HcCCcEEEecC
Confidence 4789999998876533 3333 33444 55999999987
No 322
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=22.89 E-value=98 Score=27.63 Aligned_cols=28 Identities=14% Similarity=0.081 Sum_probs=25.9
Q ss_pred CCCEEEEecCCCCccChhHHHHHHHHCC
Q psy4394 247 TSPVLVIHGTEDEVIDLSHGIAIYERCP 274 (286)
Q Consensus 247 ~~Pvlii~G~~D~~v~~~~~~~l~~~~~ 274 (286)
..+||+..|+.|.+|+.-..+++.++++
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~ 374 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLN 374 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCC
Confidence 4799999999999999999999999875
No 323
>PLN00416 carbonate dehydratase
Probab=22.56 E-value=1.2e+02 Score=24.90 Aligned_cols=34 Identities=18% Similarity=0.112 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHH
Q psy4394 150 DIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLA 185 (286)
Q Consensus 150 d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a 185 (286)
+..+.++|....+++. .|+|+|||-=|.+...+.
T Consensus 125 ~~~asLEyAv~~L~V~--~IVV~GHs~CGaV~Aa~~ 158 (258)
T PLN00416 125 GVGAAVEYAVVHLKVE--NILVIGHSCCGGIKGLMS 158 (258)
T ss_pred cchhHHHHHHHHhCCC--EEEEecCCCchHHHHHHh
Confidence 4667899999998876 999999997776655443
No 324
>PF07945 Toxin_16: Janus-atracotoxin; InterPro: IPR012499 This family includes three peptides secreted by the spider Hadronyche versuta (Blue mountains funnel-web spider) (P82226 from SWISSPROT, P82227 from SWISSPROT, P82228 from SWISSPROT). These are insect-selective, excitatory neurotoxins that may function by antagonising muscle acetylcholine receptors, or acetylcholine receptor subtypes present in other invertebrate neurons []. Janus atracotoxin-Hv1c (J-ACTX-Hv1c, P82228 from SWISSPROT) is organised into a disulphide-rich globular core (residues 3-19) and a beta-hairpin (residues 20-34). There are 4 disulphide bridges, one of which is a vicinal disulphide bridge; this is known to be unimportant in the maintenance of structure but critical for insecticidal activity []. ; GO: 0009405 pathogenesis, 0005576 extracellular region; PDB: 1DL0_A.
Probab=22.42 E-value=29 Score=17.78 Aligned_cols=12 Identities=42% Similarity=1.093 Sum_probs=3.6
Q ss_pred eeeeecCCChhh
Q psy4394 9 CCLFCFPPCPSR 20 (286)
Q Consensus 9 ~~~~~~~~~~~~ 20 (286)
.|-.|||-|++.
T Consensus 9 pcaaccpccpgt 20 (36)
T PF07945_consen 9 PCAACCPCCPGT 20 (36)
T ss_dssp B--SS----TTE
T ss_pred CcccccCCCCCc
Confidence 466777766654
No 325
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=22.19 E-value=93 Score=26.61 Aligned_cols=18 Identities=22% Similarity=0.305 Sum_probs=15.0
Q ss_pred EEEEEeecChHHHHHHHh
Q psy4394 169 IILYGQSIGTVPTIDLAS 186 (286)
Q Consensus 169 i~l~G~S~Gg~~a~~~a~ 186 (286)
-.++|||+|=+.|+.++.
T Consensus 126 ~~~~GHSlGE~aA~~~AG 143 (343)
T PLN02752 126 DVCAGLSLGEYTALVFAG 143 (343)
T ss_pred CeeeeccHHHHHHHHHhC
Confidence 368999999988887774
No 326
>cd03131 GATase1_HTS Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). HTS, the first enzyme in methionine biosynthesis in Escherichia coli, transfers a succinyl group from succinyl-CoA to homoserine forming succinyl homoserine. It has been suggested that the succinyl group of succinyl-CoA is initially transferred to an enzyme nucleophile before subsequent transfer to homoserine. The catalytic triad typical of GATase1 domains is not conserved in this GATase1-like domain. However, in common with GATase1 domains a reactive cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. It has been proposed that this cys is in the active site of the molecule. However, as succinyl has been found bound to a conserved lysine residue, this conserved cys may play a role in dimer formation. HTS acti
Probab=22.15 E-value=61 Score=24.81 Aligned_cols=39 Identities=3% Similarity=-0.001 Sum_probs=30.3
Q ss_pred ChhhHHHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhh
Q psy4394 143 SEKNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASR 187 (286)
Q Consensus 143 ~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 187 (286)
......+.+..+++|.+++ ..-.+|-+||+..|+.++.-
T Consensus 79 e~v~Yw~El~~i~dwa~~~------v~stl~iCWgaqaal~~~yG 117 (175)
T cd03131 79 EQVDYWEELTEILDWAKTH------VTSTLFSCWAAMAALYYFYG 117 (175)
T ss_pred cccchHHHHHHHHHHHHHh------CcchHHHHHHHHHHHHHHcC
Confidence 3445567899999999976 45688889999998887653
No 327
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=21.94 E-value=63 Score=27.17 Aligned_cols=35 Identities=14% Similarity=0.099 Sum_probs=22.3
Q ss_pred HHHHHHHHHHhCCCCCc--EEEEEeecChHHHHHHHh
Q psy4394 152 DAAWNTLRTRYGISPEN--IILYGQSIGTVPTIDLAS 186 (286)
Q Consensus 152 ~~~~~~l~~~~~~~~~~--i~l~G~S~Gg~~a~~~a~ 186 (286)
..+++.+.++.+.+... =.+.|.|.||.+|+.++.
T Consensus 24 ~~vL~~Le~~~~~~i~~~fDli~GTStGgiiA~~la~ 60 (308)
T cd07211 24 LEILRKIEKLTGKPIHELFDYICGVSTGAILAFLLGL 60 (308)
T ss_pred HHHHHHHHHHhCCCchhhcCEEEecChhHHHHHHHhc
Confidence 44555555554321111 148999999999999875
No 328
>KOG0094|consensus
Probab=21.84 E-value=2.9e+02 Score=21.83 Aligned_cols=55 Identities=16% Similarity=0.289 Sum_probs=35.7
Q ss_pred chhhHHHHhhccccceeEEEeeccCcCCCCccCCCCCCChhhHHHHHHHHHHHHHHHhCCCCCcEEEEEe
Q psy4394 105 GQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSEKNLYADIDAAWNTLRTRYGISPENIILYGQ 174 (286)
Q Consensus 105 ~~~~~~~~~l~~~~g~~vi~~d~~~~~~~G~G~s~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~ 174 (286)
+.++.+++......-.+|+++|. . ..+..++...+++-+..+-+-+.-.|+|+|.
T Consensus 82 ERFrslipsY~Rds~vaviVyDi-----t----------~~~Sfe~t~kWi~dv~~e~gs~~viI~LVGn 136 (221)
T KOG0094|consen 82 ERFRSLIPSYIRDSSVAVIVYDI-----T----------DRNSFENTSKWIEDVRRERGSDDVIIFLVGN 136 (221)
T ss_pred HHHhhhhhhhccCCeEEEEEEec-----c----------ccchHHHHHHHHHHHHhccCCCceEEEEEcc
Confidence 45666666666555788999998 2 2334566777777777765533345778875
No 329
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=21.62 E-value=2.1e+02 Score=21.31 Aligned_cols=52 Identities=15% Similarity=0.119 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHhC----CCCCcEEEEEeecChHHHHHHHhhcCccEEEEeCCCC
Q psy4394 149 ADIDAAWNTLRTRYG----ISPENIILYGQSIGTVPTIDLASRYQVGAVILHSPLM 200 (286)
Q Consensus 149 ~d~~~~~~~l~~~~~----~~~~~i~l~G~S~Gg~~a~~~a~~~~i~~~v~~~p~~ 200 (286)
+--.++.+|+.+..+ +++++|++..-+..|...+..+....=+++++..|.+
T Consensus 96 ~lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l~dpGD~VlVp~P~Y 151 (153)
T PLN02994 96 NFRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCIADPGDAFLVPTPYY 151 (153)
T ss_pred HHHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHHcCCCCEEEEeCCCC
Confidence 334566677777655 5677877764444433332222222346677777765
No 330
>PRK15219 carbonic anhydrase; Provisional
Probab=21.45 E-value=1.4e+02 Score=24.37 Aligned_cols=33 Identities=9% Similarity=0.091 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHH
Q psy4394 150 DIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDL 184 (286)
Q Consensus 150 d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~ 184 (286)
|+...++|....++++ .|+++|||-=|.+...+
T Consensus 128 ~~~~slEyAv~~L~v~--~IvVlGHt~CGav~Aa~ 160 (245)
T PRK15219 128 DLLGSMEFACAVAGAK--VVLVMGHTACGAVKGAI 160 (245)
T ss_pred chhhHHHHHHHHcCCC--EEEEecCCcchHHHHHH
Confidence 4677899999988766 99999999877665544
No 331
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=21.36 E-value=70 Score=26.14 Aligned_cols=35 Identities=17% Similarity=0.208 Sum_probs=24.5
Q ss_pred HHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc
Q psy4394 152 DAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY 188 (286)
Q Consensus 152 ~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 188 (286)
.-+++.+.++ ++. .-=.+.|.|.|+.++..++...
T Consensus 14 ~Gvl~al~e~-~~~-~fd~i~GtSaGAi~a~~~~~g~ 48 (266)
T cd07208 14 AGVLDAFLEA-GIR-PFDLVIGVSAGALNAASYLSGQ 48 (266)
T ss_pred HHHHHHHHHc-CCC-CCCEEEEECHHHHhHHHHHhCC
Confidence 4566666665 332 1227999999999999988764
No 332
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=21.35 E-value=1e+02 Score=25.06 Aligned_cols=35 Identities=20% Similarity=0.174 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHhCCC-CCcE-EEEEeecChHHHHHHHh
Q psy4394 151 IDAAWNTLRTRYGIS-PENI-ILYGQSIGTVPTIDLAS 186 (286)
Q Consensus 151 ~~~~~~~l~~~~~~~-~~~i-~l~G~S~Gg~~a~~~a~ 186 (286)
..-+++.+.++ ++. .+++ .+.|.|+|+.++..++.
T Consensus 14 hiGVl~~L~e~-g~~l~~~~~~i~GtSaGAl~aa~~a~ 50 (246)
T cd07222 14 HLGAAKALLRH-GKKLLKRVKRFAGASAGSLVAAVLLT 50 (246)
T ss_pred HHHHHHHHHHc-CchhhccCCEEEEECHHHHHHHHHhc
Confidence 34566667665 321 1123 79999999999998874
No 333
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=21.32 E-value=1.1e+02 Score=24.96 Aligned_cols=37 Identities=16% Similarity=0.153 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHhCCC--CCcEEEEEeecChHHHHHHHhhc
Q psy4394 151 IDAAWNTLRTRYGIS--PENIILYGQSIGTVPTIDLASRY 188 (286)
Q Consensus 151 ~~~~~~~l~~~~~~~--~~~i~l~G~S~Gg~~a~~~a~~~ 188 (286)
..-+++.+.++ ++. .+.-.+.|.|.|+.++..++...
T Consensus 19 h~GVl~~L~e~-g~~l~~~~~~i~G~SAGAl~aa~~a~g~ 57 (249)
T cd07220 19 HVGVASCLLEH-APFLVANARKIYGASAGALTATALVTGV 57 (249)
T ss_pred HHHHHHHHHhc-CCcccccCCeEEEEcHHHHHHHHHHcCC
Confidence 45566777666 221 11346889999999999887643
No 334
>PRK05844 pyruvate flavodoxin oxidoreductase subunit gamma; Validated
Probab=21.27 E-value=1.3e+02 Score=23.20 Aligned_cols=40 Identities=10% Similarity=0.086 Sum_probs=25.2
Q ss_pred EEecCCccccch-hhHHHHhhccccceeEEEeeccCcCCCC
Q psy4394 95 LFSHGNAVDIGQ-MSSFFTGLGSRINCNIFSYDYSGYDYSG 134 (286)
Q Consensus 95 v~~HG~~~~~~~-~~~~~~~l~~~~g~~vi~~d~~~~~~~G 134 (286)
|-+||.+++.-. ....+...+...||.|....-+++..||
T Consensus 4 i~~~g~gGQGi~ta~~ila~a~~~~G~~v~~~~~ygs~~RG 44 (186)
T PRK05844 4 IRWHSRAGQGAVTGAKGLADVIAKTGKEVQAFAFYGSAKRG 44 (186)
T ss_pred EEEeccCCCcHHHHHHHHHHHHHhCCceEEEeeccChhhcC
Confidence 567888776533 2233333344669999988776666665
No 335
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=21.16 E-value=94 Score=27.47 Aligned_cols=35 Identities=17% Similarity=0.116 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHHHhhc
Q psy4394 151 IDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY 188 (286)
Q Consensus 151 ~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 188 (286)
..-+++.+.++ ++. .=++.|.|.|+.+|..++...
T Consensus 82 h~GVlkaL~e~-gll--p~iI~GtSAGAivaalla~~t 116 (407)
T cd07232 82 HFGVVKALLDA-DLL--PNVISGTSGGSLVAALLCTRT 116 (407)
T ss_pred HHHHHHHHHhC-CCC--CCEEEEECHHHHHHHHHHcCC
Confidence 45566777666 444 336999999999999998754
No 336
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=20.83 E-value=1e+02 Score=27.84 Aligned_cols=28 Identities=14% Similarity=0.031 Sum_probs=25.9
Q ss_pred CCCEEEEecCCCCccChhHHHHHHHHCC
Q psy4394 247 TSPVLVIHGTEDEVIDLSHGIAIYERCP 274 (286)
Q Consensus 247 ~~Pvlii~G~~D~~v~~~~~~~l~~~~~ 274 (286)
..+||+..|+.|.+++....+++.++++
T Consensus 364 gikVLiYnGd~D~icn~~Gt~~wi~~L~ 391 (462)
T PTZ00472 364 GVRVMIYAGDMDFICNWIGNKAWTLALQ 391 (462)
T ss_pred CceEEEEECCcCeecCcHhHHHHHHhCC
Confidence 5899999999999999999999998875
No 337
>TIGR03334 IOR_beta indolepyruvate ferredoxin oxidoreductase, beta subunit. This model represents the beta subunit of indolepyruvate ferredoxin oxidoreductase, an alpha(2)/beta(2) tetramer, as found in Pyrococcus furiosus and Methanobacterium thermoautotrophicum. Cofactors for the tetramer include TPP, 4Fe4S, and 3Fe-4S. It shows considerable sequence similarity to subunits of several other ketoacid oxidoreductases.
Probab=20.70 E-value=93 Score=24.00 Aligned_cols=40 Identities=10% Similarity=0.008 Sum_probs=25.9
Q ss_pred EEecCCccccc-hhhHHHHhhccccceeEEEeeccCcCCCC
Q psy4394 95 LFSHGNAVDIG-QMSSFFTGLGSRINCNIFSYDYSGYDYSG 134 (286)
Q Consensus 95 v~~HG~~~~~~-~~~~~~~~l~~~~g~~vi~~d~~~~~~~G 134 (286)
|.++|.+++.- .....+...+...||.|...+-+|+..||
T Consensus 3 i~i~G~gGqGv~tag~ila~aa~~~G~~v~~~~~yg~~~RG 43 (189)
T TIGR03334 3 IVITGVGGQGIILASVIIGEAALKAGLPVRAAETHGMAQRG 43 (189)
T ss_pred EEEEeECchHHHHHHHHHHHHHHHcCCCeEeeeccCccccC
Confidence 56777666542 23344444555669999999986666665
No 338
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=20.61 E-value=1.9e+02 Score=18.02 Aligned_cols=45 Identities=13% Similarity=0.307 Sum_probs=29.8
Q ss_pred HHHHHHHHhCCCCCcEEEEEee-cChHHHHHHHhhcCccEEEEeCCCCc
Q psy4394 154 AWNTLRTRYGISPENIILYGQS-IGTVPTIDLASRYQVGAVILHSPLMS 201 (286)
Q Consensus 154 ~~~~l~~~~~~~~~~i~l~G~S-~Gg~~a~~~a~~~~i~~~v~~~p~~~ 201 (286)
+++.+.+.+++++++++++|-| .-...+.. ...+..+.+.++..+
T Consensus 9 ~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~---~~G~~~ilV~tG~~~ 54 (75)
T PF13242_consen 9 MLEQALKRLGVDPSRCVMVGDSLETDIEAAK---AAGIDTILVLTGVYS 54 (75)
T ss_dssp HHHHHHHHHTSGGGGEEEEESSTTTHHHHHH---HTTSEEEEESSSSSC
T ss_pred HHHHHHHHcCCCHHHEEEEcCCcHhHHHHHH---HcCCcEEEECCCCCC
Confidence 4566667778888999999999 54433332 225677666665544
No 339
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=20.57 E-value=68 Score=26.69 Aligned_cols=37 Identities=19% Similarity=0.252 Sum_probs=23.3
Q ss_pred HHHHHHHHHHhC-CCCCcEEEEEeecChHHHHHHHhhc
Q psy4394 152 DAAWNTLRTRYG-ISPENIILYGQSIGTVPTIDLASRY 188 (286)
Q Consensus 152 ~~~~~~l~~~~~-~~~~~i~l~G~S~Gg~~a~~~a~~~ 188 (286)
..+++.+.++.. +...-=.+.|.|.||.+|+.++...
T Consensus 18 ~~vL~~Le~~~~~~~~~fD~i~GTSaGaiia~~la~g~ 55 (288)
T cd07213 18 LVLLKRLAEEFPSFLDQIDLFAGTSAGSLIALGLALGY 55 (288)
T ss_pred HHHHHHHHHhCcccccceeEEEEeCHHHHHHHHHHcCc
Confidence 345555655521 1001127999999999999988653
No 340
>PF00484 Pro_CA: Carbonic anhydrase; InterPro: IPR001765 Carbonic anhydrases (4.2.1.1 from EC) (CA) are zinc metalloenzymes which catalyze the reversible hydration of carbon dioxide. In Escherichia coli, CA (gene cynT) is involved in recycling carbon dioxide formed in the bicarbonate-dependent decomposition of cyanate by cyanase (gene cynS). By this action, it prevents the depletion of cellular bicarbonate []. In photosynthetic bacteria and plant chloroplast, CA is essential to inorganic carbon fixation []. Prokaryotic and plant chloroplast CA are structurally and evolutionary related and form a family distinct from the one which groups the many different forms of eukaryotic CA's (see IPR001148 from INTERPRO). Hypothetical proteins yadF from Escherichia coli and HI1301 from Haemophilus influenzae also belong to this family. This family also includes, YbcF and related proteins, which are inactive homologues of bacterial carbonic anhydrase.; GO: 0004089 carbonate dehydratase activity, 0008270 zinc ion binding; PDB: 1DDZ_B 3LAS_A 2W3N_A 2W3Q_A 1G5C_F 3E2A_A 3E2X_B 2A8C_A 2A8D_D 3E3F_A ....
Probab=20.41 E-value=2.2e+02 Score=20.82 Aligned_cols=35 Identities=17% Similarity=0.124 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHH
Q psy4394 148 YADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDL 184 (286)
Q Consensus 148 ~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~ 184 (286)
..+..+.++|....++++ .|+++|||-=|++...+
T Consensus 38 ~~~~~~sle~av~~l~v~--~IiV~gHt~CGa~~~~~ 72 (153)
T PF00484_consen 38 DDSALASLEYAVYHLGVK--EIIVCGHTDCGAIKAAL 72 (153)
T ss_dssp -HHHHHHHHHHHHTST-S--EEEEEEETT-HHHHHHH
T ss_pred ccchhhheeeeeecCCCC--EEEEEcCCCchHHHHHH
Confidence 457788889988888766 99999999877776443
No 341
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=20.40 E-value=93 Score=25.22 Aligned_cols=26 Identities=38% Similarity=0.611 Sum_probs=20.9
Q ss_pred HHHHHHHHHHhCCCCCcEEEEEeecC
Q psy4394 152 DAAWNTLRTRYGISPENIILYGQSIG 177 (286)
Q Consensus 152 ~~~~~~l~~~~~~~~~~i~l~G~S~G 177 (286)
..+++|+.++.+++.++++++|-|.=
T Consensus 167 ~~Al~~L~~~~~~~~~~vl~aGDSgN 192 (247)
T PF05116_consen 167 GAALRYLMERWGIPPEQVLVAGDSGN 192 (247)
T ss_dssp HHHHHHHHHHHT--GGGEEEEESSGG
T ss_pred HHHHHHHHHHhCCCHHHEEEEeCCCC
Confidence 56899999999998889999999953
No 342
>PLN03014 carbonic anhydrase
Probab=20.14 E-value=1.2e+02 Score=25.97 Aligned_cols=33 Identities=18% Similarity=0.105 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHhCCCCCcEEEEEeecChHHHHHH
Q psy4394 150 DIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDL 184 (286)
Q Consensus 150 d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~ 184 (286)
++.+.++|....+++. .|+|+|||-=|.+...+
T Consensus 205 ~v~asLEYAV~~L~V~--~IVV~GHs~CGaV~Aa~ 237 (347)
T PLN03014 205 GVGAAIEYAVLHLKVE--NIVVIGHSACGGIKGLM 237 (347)
T ss_pred cchhHHHHHHHHhCCC--EEEEeCCCCchHHHHHH
Confidence 3678899999998876 99999999766555544
No 343
>cd03145 GAT1_cyanophycinase Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. This group contains proteins similar to the extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Cyanophycinase is believed to be a serine-type exopeptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow.
Probab=20.12 E-value=4.3e+02 Score=20.84 Aligned_cols=17 Identities=24% Similarity=0.391 Sum_probs=13.7
Q ss_pred cEEEEEeecChHHHHHH
Q psy4394 168 NIILYGQSIGTVPTIDL 184 (286)
Q Consensus 168 ~i~l~G~S~Gg~~a~~~ 184 (286)
...++|.|.|+.+....
T Consensus 117 G~v~~G~SAGA~i~~~~ 133 (217)
T cd03145 117 GVVIGGTSAGAAVMSDT 133 (217)
T ss_pred CCEEEEccHHHHhhhhc
Confidence 67899999999886543
Done!