RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy4394
(286 letters)
>3ksr_A Putative serine hydrolase; catalytic triad, structural genomics,
JOIN for structural genomics, JCSG; 2.69A {Xanthomonas
campestris PV}
Length = 290
Score = 106 bits (267), Expect = 2e-27
Identities = 33/222 (14%), Positives = 62/222 (27%), Gaps = 22/222 (9%)
Query: 70 FTRTSRGNRLACMFMKCSPNARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSG 129
+ L+ + P +LF HG C ++D G
Sbjct: 9 IEIPVGQDELSGTLLT--PTGMPGVLFVHGWGGSQHHSLVRAREAVGL-GCICMTFDLRG 65
Query: 130 YDYSGYGISTGRPSEKNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRYQ 189
+ GY + DI AA++ L + + +I + G S G + L
Sbjct: 66 H--EGYASMRQSVTRAQNLDDIKAAYDQLASLPYVDAHSIAVVGLSYGGYLSALLTRERP 123
Query: 190 VGAVILHSPLMSG---MRVAFPRTKRTWFFDVFPRVIFANVKTPIMGLSTLEN--IDKVP 244
V + L SP + + R L+ +N +
Sbjct: 124 VEWLALRSPALYKDAHWDQPKVSLNADPDLMDYRR----------RALAPGDNLALAACA 173
Query: 245 KVTSPVLVIHGTEDEVIDLSHGIAIYE--RCPRPVEPLWVEG 284
+ VL++ D ++ + R + + G
Sbjct: 174 QYKGDVLLVEAENDVIVPHPVMRNYADAFTNARSLTSRVIAG 215
>1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13
Length = 305
Score = 89.7 bits (222), Expect = 5e-21
Identities = 35/234 (14%), Positives = 77/234 (32%), Gaps = 29/234 (12%)
Query: 72 RTSRGNRLACMFM---KCSPNARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYS 128
R + G L + P TIL + G A + + L + ++F YD
Sbjct: 13 RVNNGQELHVWETPPKENVPFKNNTILIASGFARRMDHFAGLAEYLSTN-GFHVFRYDSL 71
Query: 129 GYDYSGYGISTGRPSEKNL---YADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLA 185
+ G+S+G E + + ++ L+T+ +NI L S+ ++
Sbjct: 72 HH----VGLSSGSIDEFTMTTGKNSLCTVYHWLQTKG---TQNIGLIAASLSARVAYEVI 124
Query: 186 SRYQVGAVILHSPLMS------------GMRVAFPRTKRTWFFDVFPRVIFANVKTPI-M 232
S ++ +I +++ + + F+ V+
Sbjct: 125 SDLELSFLITAVGVVNLRDTLEKALGFDYLSLPIDELPNDLDFEGHKLGSEVFVRDCFEH 184
Query: 233 GLSTLEN-IDKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPR-PVEPLWVEG 284
TL++ +DKV + P++ D+ + + + + G
Sbjct: 185 HWDTLDSTLDKVANTSVPLIAFTANNDDWVKQEEVYDMLAHIRTGHCKLYSLLG 238
>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad,
rotation; 1.60A {Lactobacillus rhamnosus} PDB: 3dlt_A
3dyi_A 3dyv_A 3e1g_A
Length = 251
Score = 80.7 bits (199), Expect = 4e-18
Identities = 27/213 (12%), Positives = 62/213 (29%), Gaps = 24/213 (11%)
Query: 88 PNARFTILFSHG---NAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSE 144
++ H + D+ M+ G ++ +SG+ + +
Sbjct: 19 EGTDTGVVLLHAYTGSPNDMNFMARALQRSG----YGVYVPLFSGHGTVEPLDILTKGNP 74
Query: 145 KNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY--QVGAVILHSP---- 198
+A+ AA + +Y + ++G S+G + + + SP
Sbjct: 75 DIWWAESSAAVAHMTAKY----AKVFVFGLSLGGIFAMKALETLPGITAGGVFSSPILPG 130
Query: 199 ---LMSGMRVAFPRTKRTWFFDVFPRVIFANVKTPIMGLSTL--ENIDKVPKVTSPVLVI 253
L+ G R I A + + + + V P +
Sbjct: 131 KHHLVPGFLKYAEYMNRLAGKSDESTQILAYLPGQLAAIDQFATTVAADLNLVKQPTFIG 190
Query: 254 HGTEDEVIDLSHGIAIYERCP--RPVEPLWVEG 284
+DE++D + + V+ W +
Sbjct: 191 QAGQDELVDGRLAYQLRDALINAARVDFHWYDD 223
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase,
cinnamoyl/Fe esterase, hydroxycinammates, extracellular;
HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A*
3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Length = 270
Score = 80.6 bits (199), Expect = 6e-18
Identities = 42/231 (18%), Positives = 77/231 (33%), Gaps = 28/231 (12%)
Query: 70 FTRTSRGNRLACMFMKCSPNARFTILFSHGNAVD-----IGQMSSFFTGLGSRINCNIFS 124
T G +L + + HG + + ++++ I F
Sbjct: 25 ITLERDGLQLVGTREEPFGEIYDMAIIFHGFTANRNTSLLREIANSLRDEN--IASVRF- 81
Query: 125 YDYSGYDYSGYGISTGRPSEKNLY---ADIDAAWNTLRTRYGISPENIILYGQSIGTVPT 181
D++G+G S G+ + D +A N ++T + I L G + G V
Sbjct: 82 ------DFNGHGDSDGKFENMTVLNEIEDANAILNYVKTDPHVRN--IYLVGHAQGGVVA 133
Query: 182 IDLASRY--QVGAVILHSPLMSGMRVAFPRTKRTWFFDVFPRVIFANVKTPIMGLSTLEN 239
LA Y + V+L +P + A + ++ K +G L
Sbjct: 134 SMLAGLYPDLIKKVVLLAPAATLKGDALEGNTQGVTYNPDHIPDRLPFKDLTLGGFYLRI 193
Query: 240 I------DKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPRPVEPLWVEG 284
+ + T PV +IHGT+D V+ + + +EG
Sbjct: 194 AQQLPIYEVSAQFTKPVCLIHGTDDTVVSPNASKKYDQIYQ-NSTLHLIEG 243
>3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii}
Length = 208
Score = 77.4 bits (190), Expect = 3e-17
Identities = 35/209 (16%), Positives = 67/209 (32%), Gaps = 40/209 (19%)
Query: 78 RLACMFMKC-SPNARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYG 136
+L M + T + H + + G M++ ++ + +++ G G
Sbjct: 17 QLEVMITRPKGIEKSVTGIICHPHPLHGGTMNNKVVTTLAKA-LDELGLKTVRFNFRGVG 75
Query: 137 ISTGRPSEKNLY-ADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRYQVGAVIL 195
S GR D+ A + + I L G S G + +A +V +I
Sbjct: 76 KSQGRYDNGVGEVEDLKAVLRWVEHHWSQDD--IWLAGFSFGAYISAKVAYDQKVAQLIS 133
Query: 196 HSPLMSGMRVAFPRTKRTWFFDVFPRVIFANVKTPIMGLSTLENIDKVPKVTSPVLVIHG 255
+P + A + ++ SP L++ G
Sbjct: 134 VAPPVFYEGFAS-----------------------------------LTQMASPWLIVQG 158
Query: 256 TEDEVIDLSHGIAIYERCPRPVEPLWVEG 284
+DEV+ A + PVE + + G
Sbjct: 159 DQDEVVPFEQVKAFVNQISSPVEFVVMSG 187
>1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta
hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP:
c.69.1.29 PDB: 1r1d_A* 4diu_A
Length = 247
Score = 77.1 bits (190), Expect = 8e-17
Identities = 34/220 (15%), Positives = 62/220 (28%), Gaps = 35/220 (15%)
Query: 88 PNARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSEKN- 146
+L HG S+ LG + Y Y G+G+
Sbjct: 13 EAGERAVLLLHG----FTGNSADVRMLGRFLESK--GYTCHAPIYKGHGVPPEELVHTGP 66
Query: 147 --LYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRYQVGAVILHSPLMSGMR 204
+ D+ + L+ + E I + G S+G V ++ L + ++ M
Sbjct: 67 DDWWQDVMNGYEFLKNKGY---EKIAVAGLSLGGVFSLKLGYTVPIEGIVTMCA---PMY 120
Query: 205 VAFPRTKRTWFFDVFPRVIFANVKTPIMGLSTLENIDKVP-------------------K 245
+ T + K+ +E + P
Sbjct: 121 IKSEETMYEGVLEYAREYKKREGKSEEQIEQEMEKFKQTPMKTLKALQELIADVRDHLDL 180
Query: 246 VTSPVLVIHGTEDEVIDLSHGIAIYERCPRP-VEPLWVEG 284
+ +P V+ DE+I+ IY P + W E
Sbjct: 181 IYAPTFVVQARHDEMINPDSANIIYNEIESPVKQIKWYEQ 220
>3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase
fold, hydrolase; 1.20A {Bacillus SP}
Length = 270
Score = 75.2 bits (185), Expect = 5e-16
Identities = 33/220 (15%), Positives = 66/220 (30%), Gaps = 36/220 (16%)
Query: 88 PNARFTILFSHG---NAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSE 144
N +L HG + ++ + G Y G+G
Sbjct: 37 ENGPVGVLLVHGFTGTPHSMRPLAEAYAKAG---------YTVCLPRLKGHGTHYEDMER 87
Query: 145 KN---LYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY-QVGAVILHSPLM 200
A ++ + L+ R + I + G S+G T+ LA + + ++ + +
Sbjct: 88 TTFHDWVASVEEGYGWLKQRC----QTIFVTGLSMGGTLTLYLAEHHPDICGIVPINAAV 143
Query: 201 SGMRVAFPRTKRTWFFDVFPRVIFANV----------KTPIMGLSTLENI-----DKVPK 245
+A T + KTP L L + K+ +
Sbjct: 144 DIPAIAAGMTGGGELPRYLDSIGSDLKNPDVKELAYEKTPTASLLQLARLMAQTKAKLDR 203
Query: 246 VTSPVLVIHGTEDEVIDLSHGIAIYERCP-RPVEPLWVEG 284
+ P L+ ED V+ + I++ E + +
Sbjct: 204 IVCPALIFVSDEDHVVPPGNADIIFQGISSTEKEIVRLRN 243
>3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration
switch protein, hydrolase ACTI lyase; 2.20A {Vibrio
vulnificus} PDB: 3our_A
Length = 415
Score = 75.1 bits (184), Expect = 2e-15
Identities = 25/224 (11%), Positives = 62/224 (27%), Gaps = 17/224 (7%)
Query: 73 TSRGNRLACMFMKCSPNARF-TILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYD 131
++ + + ++ S G M F ++ + + + D
Sbjct: 174 PFEKGKITAHLHLTNTDKPHPVVIVSAGLDSLQTDMWRLFRDHLAKHDIAMLTVDMPSV- 232
Query: 132 YSGYGISTGRPSEKNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY--Q 189
G S+ P ++ A N L + + + L G G + L+ +
Sbjct: 233 ----GYSSKYPLTEDYSRLHQAVLNELFSIPYVDHHRVGLIGFRFGGNAMVRLSFLEQEK 288
Query: 190 VGAVILHSPLMSGMRVAFPRTKRT--WFFDVFPRVI------FANVKTPIMGLSTLEN-I 240
+ A ++ + + + + ++ + DV + ++ + S
Sbjct: 289 IKACVILGAPIHDIFASPQKLQQMPKMYLDVLASRLGKSVVDIYSLSGQMAAWSLKVQGF 348
Query: 241 DKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPRPVEPLWVEG 284
K P+L + D V S +
Sbjct: 349 LSSRKTKVPILAMSLEGDPVSPYSDNQMVAFFSTYGKAKKISSK 392
>3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine
esterase; 2.20A {Homo sapiens}
Length = 342
Score = 72.8 bits (179), Expect = 6e-15
Identities = 45/271 (16%), Positives = 86/271 (31%), Gaps = 46/271 (16%)
Query: 42 GSSTYHVQFNDKAEWQYGDNERSNIEGFFTRTSRGNRLACMFMKCSPNARFTILFSHGNA 101
G+ +F +++ + + + G L C + K + + I SHG
Sbjct: 11 GAGDRGPEFPEESSPRRTPQSIPYQDLPHLVNADGQYLFCRYWKPTGTPKALIFVSHGAG 70
Query: 102 VDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGR----PSEKNLYADIDAAWNT 157
G+ L ++ + +D+ G+G S G D+ ++
Sbjct: 71 EHSGRYEELARMLMGL---DLLVF---AHDHVGHGQSEGERMVVSDFHVFVRDVLQHVDS 124
Query: 158 LRTRYGISPENIILYGQSIGTVPTIDLASRYQ--VGAVILHSPLMSGMRVAFPRTKR--- 212
++ Y P + L G S+G I A+ ++L SPL+ + K
Sbjct: 125 MQKDYPGLP--VFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATTFKVLAA 182
Query: 213 TWFFDVFPRVIFANVK-------------------------TPIMGLSTLENIDKV---- 243
V P + + G+ L + +V
Sbjct: 183 KVLNLVLPNLSLGPIDSSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERAL 242
Query: 244 PKVTSPVLVIHGTEDEVIDLSHGIAIYERCP 274
PK+T P L++ G+ D + D + E
Sbjct: 243 PKLTVPFLLLQGSADRLCDSKGAYLLMELAK 273
>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A*
Length = 251
Score = 70.4 bits (173), Expect = 2e-14
Identities = 41/231 (17%), Positives = 81/231 (35%), Gaps = 31/231 (13%)
Query: 73 TSRGNRLACMFM--KCSPNARFTILFSHG-----NAVDIGQMSSFFTGLGSRINCNIFSY 125
G +L K +P + HG I + +G +
Sbjct: 7 DCDGIKLNAYLDMPKNNPEKCPLCIIIHGFTGHSEERHIVAVQETLNEIG--VATLRA-- 62
Query: 126 DYSGYDYSGYGISTGRPSEKNLY---ADIDAAWNTLRTRYGISPENIILYGQSIGTVPTI 182
D G+G S G+ + L+ +I A + + ++ I + G S G + +
Sbjct: 63 -----DMYGHGKSDGKFEDHTLFKWLTNILAVVDYAKKLDFVTD--IYMAGHSQGGLSVM 115
Query: 183 DLASRY--QVGAVILHSP--LMSGMRVAFPRTKRTWFFDVFPRVIFANVKTPIMG--LST 236
A+ + A+I SP ++ + + + P + A + G +
Sbjct: 116 LAAAMERDIIKALIPLSPAAMIPEIARTGELLGLKFDPENIPDELDAWDGRKLKGNYVRV 175
Query: 237 LENID---KVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPRPVEPLWVEG 284
+ I V K T PVL++HG +DE + +A ++ + + + G
Sbjct: 176 AQTIRVEDFVDKYTKPVLIVHGDQDEAVPYEASVAFSKQYK-NCKLVTIPG 225
>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold,
2-arachidonyl-glycerol, M associated, hydrolase,
hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A
{Homo sapiens} PDB: 3jw8_A 3jwe_A*
Length = 303
Score = 70.8 bits (174), Expect = 2e-14
Identities = 42/246 (17%), Positives = 77/246 (31%), Gaps = 46/246 (18%)
Query: 67 EGFFTRTSRGNRLACMFMKCSPNARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYD 126
+ + G L C + + + I SHG G+ L ++ +
Sbjct: 18 DLPHLVNADGQYLFCRYWAPTGTPKALIFVSHGAGEHSGRYEELARMLMGL---DLLVF- 73
Query: 127 YSGYDYSGYGISTGR----PSEKNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTI 182
+D+ G+G S G D+ ++++ Y P + L G S+G I
Sbjct: 74 --AHDHVGHGQSEGERMVVSDFHVFVRDVLQHVDSMQKDYPGLP--VFLLGHSMGGAIAI 129
Query: 183 DLASRYQ--VGAVILHSPLMSGMRVAFPRTKR---TWFFDVFPRVIFANVK--------- 228
A+ ++L SPL+ + K V P + +
Sbjct: 130 LTAAERPGHFAGMVLISPLVLANPESATTFKVLAAKVLNSVLPNLSSGPIDSSVLSRNKT 189
Query: 229 ----------------TPIMGLSTLENIDKV----PKVTSPVLVIHGTEDEVIDLSHGIA 268
G+ L + +V PK+T P L++ G+ D + D
Sbjct: 190 EVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGSADRLCDSKGAYL 249
Query: 269 IYERCP 274
+ E
Sbjct: 250 LMELAK 255
>3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7;
2.10A {Thermoanaerobacterium SP}
Length = 346
Score = 69.5 bits (170), Expect = 9e-14
Identities = 23/160 (14%), Positives = 52/160 (32%), Gaps = 7/160 (4%)
Query: 126 DYSGYDYSGYGISTGRPSEKNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLA 185
+G+ G ++++ D + + + + + G S G ++ A
Sbjct: 159 TLNGHIIRGLDDDADNMLFRHIFLDTAQLAGIVMNMPEVDEDRVGVMGPSQGGGLSLACA 218
Query: 186 SRY-QVGAVILHSPLMSGMRVAFPRTKRTWFFDV---FPRVIFANVKTPIMGLSTLENID 241
+ +V V+ P +S + + + + R+ + + L ID
Sbjct: 219 ALEPRVRKVVSEYPFLSDYKRVWDLDLAKNAYQEITDYFRLFDPRHERENEVFTKLGYID 278
Query: 242 ---KVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPRPVE 278
++ VL+ G D+V S A Y +
Sbjct: 279 VKNLAKRIKGDVLMCVGLMDQVCPPSTVFAAYNNIQSKKD 318
>2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the
alpha/beta superfamily, structural genomics; HET: MSE
TLA P6G; 1.35A {Xanthomonas campestris PV}
Length = 176
Score = 63.0 bits (153), Expect = 2e-12
Identities = 25/200 (12%), Positives = 57/200 (28%), Gaps = 53/200 (26%)
Query: 90 ARFTILFSHG-----NAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSE 144
+R + +HG +A+ + ++ LG + + D++
Sbjct: 3 SRGHCILAHGFESGPDALKVTALAEVAERLG---------WTHERPDFTDLDARRDLGQL 53
Query: 145 KNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRYQVGAVILHSPLMSGMR 204
++ + R P ++L G S+G+ ++ + A+ L P
Sbjct: 54 GDVRGRLQRLLEIARAATEKGP--VVLAGSSLGSYIAAQVSLQVPTRALFLMVPPTKMGP 111
Query: 205 VAFPRTKRTWFFDVFPRVIFANVKTPIMGLSTLENIDKVPKVTSPVLVIHGTEDEVIDLS 264
+ P+ ++H DE+I +
Sbjct: 112 LPAL-----------------------------------DAAAVPISIVHAWHDELIPAA 136
Query: 265 HGIAIYERCPRPVEPLWVEG 284
IA + + L V+
Sbjct: 137 DVIAWAQARSARL--LLVDD 154
>3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix
bundle, structural genomics protein structure
initiative; HET: PGE; 2.12A {Streptococcus mutans}
Length = 405
Score = 64.3 bits (156), Expect = 6e-12
Identities = 30/228 (13%), Positives = 63/228 (27%), Gaps = 32/228 (14%)
Query: 78 RLACMFMKCSPNARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGI 137
L + A+ T++ G + G + N+ D G G
Sbjct: 146 LLPGYAIISEDKAQDTLIVVGGGDTSREDLFYMLGYSGWEHDYNVLMVDLPGQ---GKNP 202
Query: 138 STGRPSEKNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRYQ-VGAVILH 196
+ G E + A I A + + E I + G S G T + + + A I
Sbjct: 203 NQGLHFEVDARAAISAILDWYQAP----TEKIAIAGFSGGGYFTAQAVEKDKRIKAWIAS 258
Query: 197 SPLMSGMRVAF---------------------PRTKRTWFFDVFPRVIFANVKTPIMGLS 235
+P+ V + ++ I ++
Sbjct: 259 TPIYDVAEVFRISFSTALKAPKTILKWGSKLVTSVNKVAEVNLNKYAWQFGQVDFITSVN 318
Query: 236 TLENIDK---VPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPRPVEPL 280
+ + K+ P L + G ++ + +Y+ + +
Sbjct: 319 EVLEQAQIVDYNKIDVPSLFLVGAGEDSELMRQSQVLYDNFKQRGIDV 366
>2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase;
alpha/beta hydrolase, META-cleavage pathway; 2.1A
{Arthrobacter nicotinovorans} SCOP: c.69.1.41
Length = 386
Score = 63.5 bits (154), Expect = 1e-11
Identities = 32/212 (15%), Positives = 59/212 (27%), Gaps = 11/212 (5%)
Query: 76 GNRLACMFMKCS-PNARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSG 134
G + P ++ G + + R ++D G
Sbjct: 136 GIPMPVYVRIPEGPGPHPAVIMLGGLESTKEESFQMENLVLDR-GMATATFDGPGQGEMF 194
Query: 135 YGISTGRPSEKNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRYQ-VGAV 193
EK A + L I + I + G+S+G + A+ + A
Sbjct: 195 EYKRIAGDYEK----YTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAACEPRLAAC 250
Query: 194 ILHSPLMS-GMRVAFPRTKRTWFFDVFPRVIFANVKTPIMGLSTLENIDKVPKVTSPVLV 252
I + + V + + ++ + ++ P +
Sbjct: 251 ISWGGFSDLDYWDLETPLTKESWKYVSKVDTLEEARLHVHAALETRDV--LSQIACPTYI 308
Query: 253 IHGTEDEVIDLSHGIAIYERCPRPVEPLWVEG 284
+HG DEV LS + E P L VE
Sbjct: 309 LHGVHDEV-PLSFVDTVLELVPAEHLNLVVEK 339
>3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase,
copper homeostasis, malic acid; 1.88A {Lactococcus
lactis subsp}
Length = 209
Score = 57.1 bits (138), Expect = 5e-10
Identities = 17/205 (8%), Positives = 42/205 (20%), Gaps = 61/205 (29%)
Query: 87 SPNARFTILFSHG---NAVDIGQMSSFFTGLGSRI--NCNIFSYD--------YSGYDYS 133
+L H + + I + I S +
Sbjct: 12 GRKDLAPLLLLHSTGGDEHQ-------LVEIAEMIAPSHPILSIRGRINEQGVNRYFKLR 64
Query: 134 GYGISTGRPSE----KNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRYQ 189
G G T + + + L ++ + +I G S G +++ R +
Sbjct: 65 GLGGFTKENFDLESLDEETDWLTDEVSLLAEKHDLDVHKMIAIGYSNGANVALNMFLRGK 124
Query: 190 --VGAVILHSPLMSGMRVAFPRTKRTWFFDVFPRVIFANVKTPIMGLSTLENIDKVPKVT 247
+I + +
Sbjct: 125 INFDKIIAFHGMQLEDFEQTVQLDDK---------------------------------- 150
Query: 248 SPVLVIHGTEDEVIDLSHGIAIYER 272
V + + D ++ + +
Sbjct: 151 -HVFLSYAPNDMIVPQKNFGDLKGD 174
>1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR
structure initiative, PSI, joint center for structural
GENO hydrolase; 2.10A {Thermotoga maritima} SCOP:
c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A*
Length = 337
Score = 58.4 bits (141), Expect = 5e-10
Identities = 30/178 (16%), Positives = 54/178 (30%), Gaps = 6/178 (3%)
Query: 105 GQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSEKNLYADIDAAWNTLRTRYGI 164
GQ S + G Y G+ G + ++ D A + +
Sbjct: 131 GQGSGWLKGDTPDYPEGPVDPQYPGFMTRGIL-DPRTYYYRRVFTDAVRAVEAAASFPQV 189
Query: 165 SPENIILYGQSIGTVPTIDLASRYQ-VGAVILHSPLMSGMRVAFPRTKRTWFFDVFPRVI 223
E I++ G S G + +++ + A++ P + R A + + +
Sbjct: 190 DQERIVIAGGSQGGGIALAVSALSKKAKALLCDVPFLCHFRRAVQLVDTHPYAE-ITNFL 248
Query: 224 FANVKTPIMGLSTLENIDK---VPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPRPVE 278
+ + TL D + P L G D + S A Y P E
Sbjct: 249 KTHRDKEEIVFRTLSYFDGVNFAARAKIPALFSVGLMDNICPPSTVFAAYNYYAGPKE 306
>2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein,
BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics,
PSI-2; 1.72A {Homo sapiens}
Length = 194
Score = 56.3 bits (135), Expect = 7e-10
Identities = 19/138 (13%), Positives = 41/138 (29%), Gaps = 20/138 (14%)
Query: 135 YGISTGRPSEKNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRYQVGAVI 194
G + + ++ W E I+ G S G + + A ++V A++
Sbjct: 35 PGFQCLAKNMPDPITARESIWLPFMETELHCDEKTIIIGHSSGAIAAMRYAETHRVYAIV 94
Query: 195 LHSPLMSGMRVAFPRTKRTWFFDVFPRVIFANVKTPIMGLSTLENIDKVPKVTSPVLVIH 254
L S S + R + +F +K+ ++
Sbjct: 95 LVSAYTSDLGDENER--ASGYFTRPW------------------QWEKIKANCPYIVQFG 134
Query: 255 GTEDEVIDLSHGIAIYER 272
T+D + + +R
Sbjct: 135 STDDPFLPWKEQQEVADR 152
>1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural
genomics, riken structural genomics/proteomics
initiative, RSGI; 1.60A {Thermus thermophilus} SCOP:
c.69.1.27
Length = 238
Score = 56.3 bits (135), Expect = 1e-09
Identities = 26/208 (12%), Positives = 52/208 (25%), Gaps = 25/208 (12%)
Query: 88 PNARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPS---- 143
+ +L HG + + G R + ++D + + +
Sbjct: 21 EAPKALLLALHGLQGSKEHILALLPGYAER-GFLLLAFDAPRHGEREGPPPSSKSPRYVE 79
Query: 144 --EKNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRYQVGAVILHSPLMS 201
+ + A + L G S+G L +
Sbjct: 80 EVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFR---PRGVLAFI 136
Query: 202 GMRVAFPRTKRTWFFDVFPRVIFANVKTPIMGLSTLENIDKVPKVTSPVLVIHGTEDEVI 261
G + D P V+ + + V P+L +HG+ D ++
Sbjct: 137 GSGFPMKLPQGQVVED--PGVL------ALYQAPPATRGEAYGGV--PLLHLHGSRDHIV 186
Query: 262 DLSHGIAIYER-----CPRPVEPLWVEG 284
L+ E + EG
Sbjct: 187 PLARMEKTLEALRPHYPEGRLARFVEEG 214
>2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas
mendocina}
Length = 258
Score = 55.4 bits (133), Expect = 3e-09
Identities = 25/197 (12%), Positives = 48/197 (24%), Gaps = 51/197 (25%)
Query: 94 ILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSEKNLYADIDA 153
IL+ +G + + S + + + S + + A +D
Sbjct: 52 ILWGNGTGAGPSTYAGLLSHWASHG-FVVAAAETSNAGTG-----------REMLACLDY 99
Query: 154 AWNTLRTRYG-----ISPENIILYGQSIGTVPTIDLASRYQVGAVILHSPLMSGMRVAFP 208
T YG ++ + G S G +I +V P G+
Sbjct: 100 LVRENDTPYGTYSGKLNTGRVGTSGHSQGGGGSIMAGQDTRVRTTAPIQPYTLGLGHDSA 159
Query: 209 RTKRTWFFDVFPRVIFANVKTPIMGLSTLENIDKVPKVTSPVLVIHGTEDEVI-DLSHGI 267
+R P+ ++ G D + +
Sbjct: 160 SQRR---------------------------------QQGPMFLMSGGGDTIAFPYLNAQ 186
Query: 268 AIYERCPRPVEPLWVEG 284
+Y R PV
Sbjct: 187 PVYRRANVPVFWGERRY 203
>1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha
sandwich, PSI, protein structure initiative; 1.50A
{Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A
3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B*
Length = 318
Score = 52.9 bits (127), Expect = 3e-08
Identities = 30/179 (16%), Positives = 55/179 (30%), Gaps = 11/179 (6%)
Query: 115 GSRINCNIFSYDY-SGYDYSGYGI-STGRPSEKNLYADIDAAWNTLRTRYGISPENIILY 172
G + + + + + GI + +Y D A + + + I +
Sbjct: 119 GQQRSEDTSISPHGHALGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVT 178
Query: 173 GQSIGTVPTIDLASRY-QVGAVILHSPLMSGMRVAFPRTKRTWFFDVFPRVIFANVKTPI 231
G S G TI A+ A + P +S A + ++ F +P
Sbjct: 179 GGSQGGGLTIAAAALSDIPKAAVADYPYLSNFERAIDVALEQPYLEI--NSFFRRNGSPE 236
Query: 232 MGLSTLENIDK------VPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPRPVEPLWVEG 284
+ ++ + +V PVL+ G D+V S A Y E
Sbjct: 237 TEVQAMKTLSYFDIMNLADRVKVPVLMSIGLIDKVTPPSTVFAAYNHLETKKELKVYRY 295
>3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold
seven-stranded beta-sandwich, structural genomics,
structural genomics consortium, SGC; 2.40A {Homo
sapiens}
Length = 422
Score = 52.5 bits (125), Expect = 6e-08
Identities = 32/219 (14%), Positives = 67/219 (30%), Gaps = 22/219 (10%)
Query: 67 EGFFTRTSRGNRLACMFMKCSPNARF-TILFSHGNAVDIGQMSSFFTGLGSRINCNIFSY 125
G + ++ R R+ F I+ G G + + L + +
Sbjct: 133 PGVWRQSVRAGRVRATLFLPPGPGPFPGIIDIFGIG---GGLLEYRASLLAGHGFATLAL 189
Query: 126 DYSGYDYSGYGISTGRPSEKNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLA 185
Y Y++ +L + A + + I L G S+G + +A
Sbjct: 190 AY--YNFEDLP---NNMDNISL-EYFEEAVCYMLQHPQVKGPGIGLLGISLGADICLSMA 243
Query: 186 SRY-QVGAVILHSPLMSGMRVAFPRTKRTWFFDVFPR----------VIFANVKTPIMGL 234
S V A + + A + + V +++ ++G
Sbjct: 244 SFLKNVSATVSINGSGISGNTAINYKHSSIPPLGYDLRRIKVAFSGLVDIVDIRNALVGG 303
Query: 235 STLENIDKVPKVTSPVLVIHGTEDEVID-LSHGIAIYER 272
++ + K P+L+I G +D + + ER
Sbjct: 304 YKNPSMIPIEKAQGPILLIVGQDDHNWRSELYAQTVSER 342
>2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct
initiative, midwest center for structural genomics,
MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP:
c.69.1.14
Length = 226
Score = 50.2 bits (120), Expect = 1e-07
Identities = 15/126 (11%), Positives = 29/126 (23%), Gaps = 37/126 (29%)
Query: 149 ADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY--QVGAVILHSPLMSGMRVA 206
+++ + Y NI+ G S G L Y + +LH P++ +
Sbjct: 101 KELNEFLDEAAKEYKFDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPRRGMQ 160
Query: 207 FPRTKRTWFFDVFPRVIFANVKTPIMGLSTLENIDKVPKVTSPVLVIHGTEDEVIDLSHG 266
V + GT D + +
Sbjct: 161 LANLAGK-----------------------------------SVFIAAGTNDPICSSAES 185
Query: 267 IAIYER 272
+
Sbjct: 186 EELKVL 191
>3e0x_A Lipase-esterase related protein; APC60309, clostridium
acetobutylicum ATCC 824, structural genomics, PSI-2;
HET: MSE; 1.45A {Clostridium acetobutylicum}
Length = 245
Score = 48.8 bits (117), Expect = 4e-07
Identities = 38/216 (17%), Positives = 65/216 (30%), Gaps = 42/216 (19%)
Query: 88 PNARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYS--GYDYSGYGISTGRPSEK 145
+ T+LF HG G F L + DY+ D G+G S G
Sbjct: 13 KKSPNTLLFVHG----SGCNLKIFGELEK------YLEDYNCILLDLKGHGESKG-QCPS 61
Query: 146 NLYADID--AAW-NTLRTRYGISPENIILYGQSIGTVPTIDLASRYQ--VGAVILH--SP 198
+Y ID A + +NI L G S+G + +A + V V+
Sbjct: 62 TVYGYIDNVANFITNSEVTKHQ--KNITLIGYSMGGAIVLGVALKKLPNVRKVVSLSGGA 119
Query: 199 LMSGMRVAFP-RTKRTWFFDVFPRVIFANVKTPIMG--LSTLENI--------------- 240
+ F + + + + P+ TLE
Sbjct: 120 RFDKLDKDFMEKIYHNQLDNNYLLECIGGIDNPLSEKYFETLEKDPDIMINDLIACKLID 179
Query: 241 --DKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCP 274
D + + PV I ++ + + + I +
Sbjct: 180 LVDNLKNIDIPVKAIVAKDELLTLVEYSEIIKKEVE 215
>1vkh_A Putative serine hydrolase; structural genomics, joint center
structural genomics, JCSG, protein structure initiative,
PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae}
SCOP: c.69.1.32
Length = 273
Score = 48.9 bits (116), Expect = 5e-07
Identities = 33/224 (14%), Positives = 67/224 (29%), Gaps = 53/224 (23%)
Query: 83 FMKCSPNARFTILFSHG--------NAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSG 134
F + S N R +++ HG D Q+++ + + +S +Y
Sbjct: 33 FQEISQNTREAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEY------- 85
Query: 135 YGISTGRPSEKNLY----ADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASR--- 187
R S + D + L G NI + G S+G + +
Sbjct: 86 ------RLSPEITNPRNLYDAVSNITRLVKEKG--LTNINMVGHSVGATFIWQILAALKD 137
Query: 188 ----------------YQVGAVILHSPL--MSGMRVAFPRTKRTWFF-DVFPRVIFANVK 228
V V L + + + + +P F FP I +
Sbjct: 138 PQEKMSEAQLQMLGLLQIVKRVFLLDGIYSLKELLIEYPEYD--CFTRLAFPDGIQMYEE 195
Query: 229 TPIMGLSTLENIDKVPKVTSPVLVIHGTEDEVIDLSHGIAIYER 272
P + + + + + + ++H DE++ L +
Sbjct: 196 EPSRVMPYV--KKALSRFSIDMHLVHSYSDELLTLRQTNCLISC 237
>2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY
diffraction; 1.60A {Xanthomonas campestris} SCOP:
c.69.1.36
Length = 220
Score = 48.0 bits (113), Expect = 7e-07
Identities = 32/211 (15%), Positives = 58/211 (27%), Gaps = 43/211 (20%)
Query: 78 RLACMFMKCSPNA---RFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSG 134
L P+ T + H + + G M + + +R +++
Sbjct: 21 PLDVAVDLPEPDVAVQPVTAIVCHPLSTEGGSMHNKVVTMAARA-LRELGITVVRFNFRS 79
Query: 135 YGISTGRPSEKN-LYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRYQVGAV 193
G S G + D+ A +R + + L G S G ++ A+ +
Sbjct: 80 VGTSAGSFDHGDGEQDDLRAVAEWVRAQRPTDT--LWLAGFSFGAYVSLRAAAALEP--- 134
Query: 194 ILHSPLMSGMRVAFPRTKRTWFFDVFPRVIFANVKTPIMGLSTLENIDKVPKVTSPVLVI 253
+ P R F DV P + LVI
Sbjct: 135 -------QVLISIAPPAGRWDFSDVQPP--------------------------AQWLVI 161
Query: 254 HGTEDEVIDLSHGIAIYERCPRPVEPLWVEG 284
G DE++D E + + +
Sbjct: 162 QGDADEIVDPQAVYDWLETLEQQPTLVRMPD 192
>2yys_A Proline iminopeptidase-related protein; TTHA1809, structural
genomics, unknown function; 2.20A {Thermus thermophilus}
Length = 286
Score = 47.8 bits (114), Expect = 1e-06
Identities = 28/180 (15%), Positives = 49/180 (27%), Gaps = 55/180 (30%)
Query: 130 YDYSGYGISTGRPSEKNLY------ADIDAAWNTLRTRYGISPENIILYGQSIGTVPTID 183
+D G G S P + L+ D L G+ E L G V ++
Sbjct: 58 FDQRGSGRSLELPQDPRLFTVDALVEDTLL----LAEALGV--ERFGLLAHGFGAVVALE 111
Query: 184 LASRY--QVGAVILHSPLMS---------------------GMRVAFPRTKRTWFF---- 216
+ R+ GA++L + ++ A R + F
Sbjct: 112 VLRRFPQAEGAILLAPWVNFPWLAARLAEAAGLAPLPDPEENLKEALKREEPKALFDRLM 171
Query: 217 --DVFPRVIFA--------------NVKTPIMGLSTLENIDKVPKVTSPVLVIHGTEDEV 260
R+ + + GL L+ + P+ V+ G D
Sbjct: 172 FPTPRGRMAYEWLAEGAGILGSDAPGLAFLRNGLWRLDYTPYLTPERRPLYVLVGERDGT 231
>2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo
sapiens} PDB: 2oci_A* 2ock_A 2ocl_A
Length = 254
Score = 47.3 bits (113), Expect = 2e-06
Identities = 30/169 (17%), Positives = 59/169 (34%), Gaps = 26/169 (15%)
Query: 130 YDYSGYGIST--GRPSEKNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASR 187
+D GYG S R + + L + + L G S G + + A++
Sbjct: 57 WDPRGYGHSRPPDRDFPADFFERDAKDAVDLMKALKF--KKVSLLGWSDGGITALIAAAK 114
Query: 188 Y--QVGAVILHSP----------LMSGMRVAFPRTKRT-------WFFDVFPRVIFANVK 228
Y + +++ + G+R ++RT + +D F R V
Sbjct: 115 YPSYIHKMVIWGANAYVTDEDSMIYEGIRDVSKWSERTRKPLEALYGYDYFARTCEKWVD 174
Query: 229 TPIMGLSTLENID---KVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCP 274
+ +P+V P L++HG +D ++ H I++
Sbjct: 175 GIRQFKHLPDGNICRHLLPRVQCPALIVHGEKDPLVPRFHADFIHKHVK 223
>3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta
hydrolase, alternative splicing, hydrolase,
mitochondrion, polymorphism, serine esterase; 2.10A
{Homo sapiens}
Length = 446
Score = 46.3 bits (109), Expect = 5e-06
Identities = 28/209 (13%), Positives = 56/209 (26%), Gaps = 21/209 (10%)
Query: 76 GNRLACMFMKCSPNARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGY 135
G +F+ P I+ G G + + L + + + Y Y+Y
Sbjct: 159 GRVRGTLFLPPEPGPFPGIVDMFGTG---GGLLEYRASLLAGKGFAVMALAY--YNYEDL 213
Query: 136 GISTGRPSEKNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRYQ------ 189
+L + A N L + + + L G S G + +AS +
Sbjct: 214 P---KTMETLHL-EYFEEAMNYLLSHPEVKGPGVGLLGISKGGELCLSMASFLKGITAAV 269
Query: 190 ---VGAVILHSPLMSGMRVA--FPRTKRTWFFDVFPRVIFANVKTPIMGLSTLENIDKVP 244
+ L + +V + ++ V
Sbjct: 270 VINGSVANVGGTLRYKGETLPPVGVNRNRIKVTKDGYADIVDVLNSPLEGPDQKSFIPVE 329
Query: 245 KVTSPVLVIHGTEDEVIDLS-HGIAIYER 272
+ S L + G +D + +R
Sbjct: 330 RAESTFLFLVGQDDHNWKSEFYANEACKR 358
>3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural
genomics, joint CE structural genomics, JCSG, protein
structure initiative; 1.75A {Mesorhizobium loti} SCOP:
c.69.1.14
Length = 223
Score = 45.3 bits (107), Expect = 6e-06
Identities = 18/115 (15%), Positives = 26/115 (22%), Gaps = 37/115 (32%)
Query: 149 ADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY--QVGAVILHSPLMSGMRVA 206
A A N R+G++ ++ G S G L + V L P+ V
Sbjct: 93 AAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVLDHVP 152
Query: 207 FPRTKRTWFFDVFPRVIFANVKTPIMGLSTLENIDKVPKVTSPVLVIHGTEDEVI 261
L+I G DE
Sbjct: 153 ATDLAGI-----------------------------------RTLIIAGAADETY 172
>4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A
4ao8_A
Length = 259
Score = 44.9 bits (105), Expect = 1e-05
Identities = 37/268 (13%), Positives = 81/268 (30%), Gaps = 62/268 (23%)
Query: 35 SFTPTESGSSTYHVQFNDKAEWQYGDNERSNIEGFFTRTSRGNRLACMFMKCSPNARF-T 93
S GS + + +N K E + ER F+ G + ++ + +
Sbjct: 4 SHHHHHHGSMRHQMSWNGKDERKLSVQERG-----FSLEVDGRTVPGVYWSPAEGSSDRL 58
Query: 94 ILFSHGNAVDIGQMSSFFTGLGSRINCN---IFSYDYSGYDYSGYGISTGRPSE------ 144
+L HG + + + + + D G+ + P++
Sbjct: 59 VLLGHGGTTH--KKVEYIEQVAKLLVGRGISAMAIDGPGHGERASVQAGREPTDVVGLDA 116
Query: 145 -----------KNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY-QVGA 192
+ AD AA + + P +G S+GT+ + + + ++
Sbjct: 117 FPRMWHEGGGTAAVIADWAAALDFIEAE--EGPRPTGWWGLSMGTMMGLPVTASDKRIKV 174
Query: 193 VILHSPLMSGMRVAFPRTKRTWFFDVFPRVIFANVKTPIMGLSTLENIDKVPKVTSPVLV 252
+L + G+ P+VT PV
Sbjct: 175 ALLGLMGVEGVNGEDLV-------------------------------RLAPQVTCPVRY 203
Query: 253 IHGTEDEVIDLSHGIAIYERCPRPVEPL 280
+ +DE++ L G+ ++ + + L
Sbjct: 204 LLQWDDELVSLQSGLELFGKLGTKQKTL 231
>1iup_A META-cleavage product hydrolase; aromatic compounds, cumene,
isopropylbenzene, META-cleavage compound hydrolase;
1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB:
1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A
2d0d_A
Length = 282
Score = 44.6 bits (106), Expect = 1e-05
Identities = 34/190 (17%), Positives = 63/190 (33%), Gaps = 52/190 (27%)
Query: 130 YDYSGYGIS---TGRPSEKNLYAD-IDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLA 185
D G+G + K+ + D I + L I E + G + G I A
Sbjct: 60 PDMVGFGFTDRPENYNYSKDSWVDHIIGIMDAL----EI--EKAHIVGNAFGGGLAIATA 113
Query: 186 SRY--QVGAVIL------HSPLMSGMRVAFPRTK---------RTWFFD----------- 217
RY +V ++L + G+ + T + +D
Sbjct: 114 LRYSERVDRMVLMGAAGTRFDVTEGLNAVWGYTPSIENMRNLLDIFAYDRSLVTDELARL 173
Query: 218 ------------VFPRVIFANVKTPIMGLSTLENIDKVPKVTSPVLVIHGTEDEVIDLSH 265
F + + I L++ + + + + + L+IHG ED+V+ LS
Sbjct: 174 RYEASIQPGFQESFSSMFPEPRQRWIDALASSD--EDIKTLPNETLIIHGREDQVVPLSS 231
Query: 266 GIAIYERCPR 275
+ + E R
Sbjct: 232 SLRLGELIDR 241
>1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase,
polyketide, tailoring enzyme, structural proteomics in
europe, spine; HET: AKT 1PE; 1.45A {Streptomyces
purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A*
Length = 298
Score = 44.5 bits (105), Expect = 2e-05
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 241 DKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCP 274
++ +VT P LVI D + HG + P
Sbjct: 231 AELREVTVPTLVIQAEHDPIAPAPHGKHLAGLIP 264
>3llc_A Putative hydrolase; structural genomics, joint center for ST
genomics, JCSG, protein structure initiative, PSI-2;
HET: MSE PG4; 1.80A {Agrobacterium vitis}
Length = 270
Score = 44.3 bits (104), Expect = 2e-05
Identities = 28/226 (12%), Positives = 62/226 (27%), Gaps = 23/226 (10%)
Query: 69 FFTRTSRGNRLACMFMKCSPNARFTILFSHGNAVDI-GQMSSFFTGLGSRINCNIFSYDY 127
+ S +A + + + R T ++ G D+ G + L + + +DY
Sbjct: 15 TVGQGSDARSIAALVRAPAQDERPTCIWLGGYRSDMTGTKALEMDDLAASLGVGAIRFDY 74
Query: 128 SGYDYSGYGISTGRPSEKNL---YADIDAAWNTLRTRYGIS--------------PENII 170
SG+ G S G + + + A + + I E
Sbjct: 75 SGH-----GASGGAFRDGTISRWLEEALAVLDHFKPEKAILVGSSMGGWIALRLIQELKA 129
Query: 171 LYGQSIGTVPTIDLASRYQVGAVILHSPLMSGMRVAFPRTKRTWFFDVFPRVIFANVKTP 230
+ + +A + ++ L R + +
Sbjct: 130 RHDNPTQVSGMVLIAPAPDFTSDLIEPLLGDRERAELAENGYFEEVSEYSPEPNIFTRAL 189
Query: 231 IMGLSTLENIDKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPRP 276
+ + + PV ++ G D + H + + E P
Sbjct: 190 MEDGRANRVMAGMIDTGCPVHILQGMADPDVPYQHALKLVEHLPAD 235
>4fle_A Esterase; structural genomics, PSI-biology, northeast structural
genom consortium, NESG, alpha-beta protein, rossmann
fold, HY; 2.10A {Yersinia enterocolitica subsp}
Length = 202
Score = 43.6 bits (102), Expect = 2e-05
Identities = 22/135 (16%), Positives = 48/135 (35%), Gaps = 6/135 (4%)
Query: 146 NLYADIDAAWNTLRTRY-GISPENIILYGQSIGTVPTIDLASRYQVGAVILHSPLMSGMR 204
L A L + + ++I + G S+G L+ R+ + AV+++ +
Sbjct: 40 QLPPYPAEAAEMLESIVMDKAGQSIGIVGSSLGGYFATWLSQRFSIPAVVVNPAVRPFEL 99
Query: 205 VAFPRTKRTWFFDVFPRVIFANVKTPIMGLSTLENIDKVPKVTSPVLVIHGTEDEVIDLS 264
++ + + V+ + + + ++ T DEV+D
Sbjct: 100 LSDYLGENQNPYTGQKYVL-----ESRHIYDLKAMQIEKLESPDLLWLLQQTGDEVLDYR 154
Query: 265 HGIAIYERCPRPVEP 279
+A Y C + VE
Sbjct: 155 QAVAYYTPCRQTVES 169
>3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint
center for structural genomics, JCSG; HET: MSE; 1.90A
{Bacteroides vulgatus atcc 8482}
Length = 391
Score = 44.1 bits (103), Expect = 3e-05
Identities = 29/171 (16%), Positives = 53/171 (30%), Gaps = 6/171 (3%)
Query: 110 FFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSEKNLYADIDAAWNTLRTRYGISPENI 169
G S + C ++Y S + + G N ++ + I + I
Sbjct: 168 AAAGEASDLECYDKGWNYDYDVVSRFLLELGWSWLGYTSYLDMQVLNWMKAQSYIRKDRI 227
Query: 170 ILYGQSIGTVPTIDLASRYQ-VGAVILHSPLMSGMRVAFPRTKRTWFFDVFPRVIFANVK 228
++ G S+GT P + L + + A + + L A TK ++
Sbjct: 228 VISGFSLGTEPMMVLGVLDKDIYAFVYNDFLCQTQERAVVMTKPDKENRRPFPNSIRHL- 286
Query: 229 TPIMGLSTLENIDKVPKVT-SPVLVIHGTEDEVIDLSHGIAIYERCPRPVE 278
P D V + P++ G D L + Y +P
Sbjct: 287 IPGY-WRYFNFPDVVASLAPRPIIFTEGGLDRDFRLVQ--SAYAASGKPEN 334
>3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2,
structural genomics, protein structure initiative,
midwest for structural genomics; 2.00A {Oenococcus oeni}
Length = 272
Score = 43.5 bits (103), Expect = 3e-05
Identities = 35/223 (15%), Positives = 57/223 (25%), Gaps = 47/223 (21%)
Query: 92 FTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSEKNLYADI 151
I+F HG ++D FF L + D G G + S +
Sbjct: 22 TPIIFLHGLSLDKQSTCLFFEPLSNVGQYQRIYLDLPGM---GN---SDPISPSTSDNVL 75
Query: 152 DAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY--QVGAVILHSPLMSG------- 202
+ + G ILYG S G +A Q V L P+++
Sbjct: 76 ETLIEAIEEIIGA--RRFILYGHSYGGYLAQAIAFHLKDQTLGVFLTCPVITADHSKRLT 133
Query: 203 -------MRVAFPRTKRTWFFDVFPRVIFANVKTP-----------------------IM 232
P + +F D + N +
Sbjct: 134 GKHINILEEDINPVENKEYFADFLSMNVIINNQAWHDYQNLIIPGLQKEDKTFIDQLQNN 193
Query: 233 GLSTLENIDKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPR 275
T E K P ++ G D+V+ + +
Sbjct: 194 YSFTFEEKLKNINYQFPFKIMVGRNDQVVGYQEQLKLINHNEN 236
>2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural
genomics, PSI, structure initiative; 2.00A {Pseudomonas
aeruginosa}
Length = 367
Score = 43.9 bits (103), Expect = 3e-05
Identities = 18/83 (21%), Positives = 32/83 (38%), Gaps = 5/83 (6%)
Query: 130 YDYSGYGISTGRP----SEKNLYADIDAAWNTLRTRYGISPENIILYGQSI-GTVPTIDL 184
+D S G S G+P S D AA + + ++ E I + G G + +
Sbjct: 130 FDPSYTGESGGQPRNVASPDINTEDFSAAVDFISLLPEVNRERIGVIGICGWGGMALNAV 189
Query: 185 ASRYQVGAVILHSPLMSGMRVAF 207
A +V AV+ + ++
Sbjct: 190 AVDKRVKAVVTSTMYDMTRVMSK 212
>3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga
maritima} PDB: 3doi_A
Length = 380
Score = 43.1 bits (101), Expect = 5e-05
Identities = 18/125 (14%), Positives = 38/125 (30%), Gaps = 35/125 (28%)
Query: 149 ADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRYQVGAVILHSPLMSGMRVAFP 208
+ L Y I I + G S+G T +
Sbjct: 245 LAVIKIIRKLLDEYNIDENRIYITGLSMGGYGTWTAIMEFP------------------- 285
Query: 209 RTKRTWFFDVFPRVIFANVKTPIMGLSTLENIDKVPKVTSPVLVIHGTEDEVIDLSHGIA 268
++F I PI G + ++++ + P+ V H +D V+ + +
Sbjct: 286 --------ELFAAAI------PICGGGDVSKVERIKDI--PIWVFHAEDDPVVPVENSRV 329
Query: 269 IYERC 273
+ ++
Sbjct: 330 LVKKL 334
>1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase);
PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10
Length = 285
Score = 42.3 bits (100), Expect = 8e-05
Identities = 7/35 (20%), Positives = 16/35 (45%)
Query: 241 DKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPR 275
+ ++ VLV HG +D ++ L + + +
Sbjct: 219 ATLGRLPHDVLVFHGRQDRIVPLDTSLYLTKHLKH 253
>2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics,
APC5865, hydrolase, PSI-2, protein STRU initiative; HET:
MSE; 1.50A {Agrobacterium tumefaciens str} SCOP:
c.69.1.36
Length = 249
Score = 41.4 bits (96), Expect = 1e-04
Identities = 27/211 (12%), Positives = 53/211 (25%), Gaps = 39/211 (18%)
Query: 78 RLACMFMKCSPNARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGI 137
RL + + + H + G M++ + + +++ G
Sbjct: 34 RLEGRYQPSKEKSAPIAIILHPHPQFGGTMNNQIVYQLFYL-FQKRGFTTLRFNFRSIGR 92
Query: 138 STGRPSEKNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRYQVGAVILHS 197
S G A+ ++ + G S G + L R
Sbjct: 93 SQGEFDHGAGELSDAASALDWVQSLHPDSKSCWVAGYSFGAWIGMQLLMRR--------- 143
Query: 198 PLMSGMRVAFPRTKRTWFFDVFPRVIFANVKTPIMGLSTLENIDKVPKVTSPVLVIHGTE 257
P + G P+ F + P S L+I+G
Sbjct: 144 PEIEGFMSIAPQPNTYDFSFLAPC-------------------------PSSGLIINGDA 178
Query: 258 DEVIDLSHGIAIYERCPRP----VEPLWVEG 284
D+V + E+ + + G
Sbjct: 179 DKVAPEKDVNGLVEKLKTQKGILITHRTLPG 209
>2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK;
1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A*
2wug_A* 2vf2_A
Length = 291
Score = 41.5 bits (98), Expect = 2e-04
Identities = 15/65 (23%), Positives = 25/65 (38%), Gaps = 7/65 (10%)
Query: 211 KRTWFFDVFPRVIFANVKTPIMGLSTLENIDKVPKVTSPVLVIHGTEDEVIDLSHGIAIY 270
T + A+ + +M +V ++ PVL+I G ED V L +
Sbjct: 201 SLTATRAMGKSFAGADFEAGMMW-------REVYRLRQPVLLIWGREDRVNPLDGALVAL 253
Query: 271 ERCPR 275
+ PR
Sbjct: 254 KTIPR 258
>2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase
fold, structural genomics, structural G of pathogenic
protozoa consortium; 2.20A {Trypanosoma brucei}
Length = 335
Score = 41.6 bits (97), Expect = 2e-04
Identities = 30/230 (13%), Positives = 61/230 (26%), Gaps = 47/230 (20%)
Query: 70 FTRTSRGNRLACMFMKCSPNARFTILFSHGNAVDIGQMSSFFTGLGSRINCN--IFSYDY 127
FT +FM + +AR +L+ G + +FT L + + +
Sbjct: 18 FTYYKDPYCKIPVFMM-NMDARRCVLWVGGQTESLLS-FDYFTNLAEELQGDWAFVQVEV 75
Query: 128 SGYDYSGYGISTGRPSEKNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASR 187
G G + D+D L + + + L+ S GT +L
Sbjct: 76 P-SGKIGSGPQ----DHAHDAEDVDDLIGILLRDHCM--NEVALFATSTGTQLVFELLEN 128
Query: 188 YQ----VGAVILHSPLMSGMRVAFPRTKRTWFFDVFPRVIFANVKTPIMGLSTLENI--- 240
+ VILH + F + +++ + + +I
Sbjct: 129 SAHKSSITRVILHGVVCDPENPLFTPEGCAARKEHVEKLMAEGRGEDSLAMLKHYDIPIT 188
Query: 241 -----------------------------DKVPKVTSPVLVIHGTEDEVI 261
V + P+L++ +
Sbjct: 189 PARLAGGGFPTLQEAVWNPCIRKEFDVLRRSVGVIKVPLLLMLAHNVQYK 238
>2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088,
agrobacterium tumefaciens STR. C58 structural genomics,
PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP:
c.69.1.14
Length = 251
Score = 41.1 bits (96), Expect = 2e-04
Identities = 23/195 (11%), Positives = 43/195 (22%), Gaps = 50/195 (25%)
Query: 88 PNARFTILFSHG---NAVDIGQMSSF----FTGLGSRINCNIFSYDYSGYDYSGYGISTG 140
+ HG + + T L + + + +G G
Sbjct: 59 VAGAPLFVLLHGTGGDENQFFDFGARLLPQATILSPVGDVSEHGA-ARFFRRTG----EG 113
Query: 141 RPSEKNLYADIDAAWNTLRT-RYGISPENIILYGQSIGTVPTIDLASRY--QVGAVILHS 197
+L + ++ R +I G S G ++ A +L
Sbjct: 114 VYDMVDLERATGKMADFIKANREHYQAGPVIGLGFSNGANILANVLIEQPELFDAAVLMH 173
Query: 198 PLMSGMRVAFPRTKRTWFFDVFPRVIFANVKTPIMGLSTLENIDKVPKVTSPVLVIHGTE 257
PL+ P VL+ G
Sbjct: 174 PLIPFEPKISPAKPTR-----------------------------------RVLITAGER 198
Query: 258 DEVIDLSHGIAIYER 272
D + + A+ E
Sbjct: 199 DPICPVQLTKALEES 213
>1j1i_A META cleavage compound hydrolase; carbazole degradation, META
cleavage product hydrolase, histidine tagged protein,
alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP:
c.69.1.10
Length = 296
Score = 41.2 bits (97), Expect = 2e-04
Identities = 19/185 (10%), Positives = 52/185 (28%), Gaps = 52/185 (28%)
Query: 134 GYGIS---TGRPSEKNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY-- 188
G+G + ++ + + + + G S+G + ++ +
Sbjct: 75 GFGKTAKPDIEYTQDRRIRHLHDFIKAM----NFDG-KVSIVGNSMGGATGLGVSVLHSE 129
Query: 189 QVGAVIL------HSPLMSGMR--VAFPRTK-------RTWFFD---------------- 217
V A++L + +R + + T+ + D
Sbjct: 130 LVNALVLMGSAGLVVEIHEDLRPIINYDFTREGMVHLVKALTNDGFKIDDAMINSRYTYA 189
Query: 218 -------VFPRVIFANVKTPIMGLSTLENIDKVPKVTSPVLVIHGTEDEVIDLSHGIAIY 270
+ + + + + + KV P LV+ G +D+V+ +
Sbjct: 190 TDEATRKAYVATMQWIREQGGLFYDP----EFIRKVQVPTLVVQGKDDKVVPVETAYKFL 245
Query: 271 ERCPR 275
+
Sbjct: 246 DLIDD 250
>2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond
hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia
xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A*
3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A
Length = 286
Score = 40.8 bits (96), Expect = 2e-04
Identities = 5/35 (14%), Positives = 15/35 (42%)
Query: 241 DKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPR 275
++ ++ + + G +D + L HG+ +
Sbjct: 220 ARLGEIKAKTFITWGRDDRFVPLDHGLKLLWNIDD 254
>1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta
hydrolase fold; 2.10A {Escherichia coli}
Length = 289
Score = 40.8 bits (96), Expect = 2e-04
Identities = 4/35 (11%), Positives = 15/35 (42%)
Query: 241 DKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPR 275
++ ++ + L++ G D + + G+ +
Sbjct: 223 PRLAEIKAQTLIVWGRNDRFVPMDAGLRLLSGIAG 257
>3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2,
protein structure initiative; 3.20A {Lactococcus lactis
subsp}
Length = 276
Score = 40.6 bits (95), Expect = 3e-04
Identities = 26/139 (18%), Positives = 51/139 (36%), Gaps = 23/139 (16%)
Query: 149 ADIDAAWNTLRTR---YGISPENIILYGQSIG---TVPTIDLASRYQVGAVILHSPLMSG 202
++ A ++ + + I+PE + L G S G + ++ VIL P+ S
Sbjct: 98 EEVQAVFSLIHQNHKEWQINPEQVFLLGCSAGGHLAAWYGNSEQIHRPKGVILCYPVTS- 156
Query: 203 MRVAFPRTKRTWFFDVFPRVIFANVKTPIMGLSTLENIDKVPKVTSPVLVIHGTEDEVID 262
+P ++ I +S +KV T P + H +DE +
Sbjct: 157 FTFGWPSD-------------LSHFNFEIENISEYNISEKVTSSTPPTFIWHTADDEGVP 203
Query: 263 LSHGIAIYERCPR---PVE 278
+ + + +R + P E
Sbjct: 204 IYNSLKYCDRLSKHQVPFE 222
>3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal
hydrolase; HET: PE4; 1.76A {Thermobifida alba}
Length = 306
Score = 40.9 bits (95), Expect = 3e-04
Identities = 31/198 (15%), Positives = 54/198 (27%), Gaps = 57/198 (28%)
Query: 94 ILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSEKNLYADIDA 153
I S G ++ + S G+ +T + ++A
Sbjct: 99 IAISPGYTGTQSSIAWLGERIASH-----------GFVVIAIDTNTTLDQPDSRARQLNA 147
Query: 154 AWNTLRTRYG------ISPENIILYGQSIGTVPTIDLAS-RYQVGAVILHSPLMSGMRVA 206
A + + T I + + G S+G T+ LAS R + A I +P
Sbjct: 148 ALDYMLTDASSAVRNRIDASRLAVMGHSMGGGGTLRLASQRPDLKAAIPLTPWHLN---- 203
Query: 207 FPRTKRTWFFDVFPRVIFANVKTPIMGLSTLENIDKVPKVTSPVLVIHGTEDEVIDL-SH 265
+T P L+I D + + H
Sbjct: 204 ----------------------------------KSWRDITVPTLIIGAEYDTIASVTLH 229
Query: 266 GIAIYERCPRPVEPLWVE 283
Y P P + ++E
Sbjct: 230 SKPFYNSIPSPTDKAYLE 247
>3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family,
hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB:
3cn7_A*
Length = 226
Score = 39.7 bits (93), Expect = 5e-04
Identities = 32/149 (21%), Positives = 55/149 (36%), Gaps = 46/149 (30%)
Query: 135 YGISTGRPSEKNLYADIDAAWNTLRT------RYGISPENIILYGQSIGTVPTIDLASRY 188
Y I P+ ++A+ + + GI+ E IIL G S G
Sbjct: 78 YDILAFSPARAIDEDQLNASADQVIALIDEQRAKGIAAERIILAGFSQG----------- 126
Query: 189 QVGAVILHSPLMSGMRVAFPRTKRTWFFDVFPRVIFANVKTPIMGLST-LENIDKVPKVT 247
GAV+LH+ + + + ++ LST D +
Sbjct: 127 --GAVVLHTAFRR-----------------YAQPLGG-----VLALSTYAPTFDDLALDE 162
Query: 248 S----PVLVIHGTEDEVIDLSHGIAIYER 272
PVL +HG++D+V+D + G A ++
Sbjct: 163 RHKRIPVLHLHGSQDDVVDPALGRAAHDA 191
>3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold,
hydrolase; 1.72A {Homo sapiens}
Length = 239
Score = 39.8 bits (93), Expect = 5e-04
Identities = 31/228 (13%), Positives = 57/228 (25%), Gaps = 65/228 (28%)
Query: 73 TSRGNRLACMFMKCSPNARFTILFSHG---NAVDIGQMSSFFTGLGSR------------ 117
+ G+ L + + +++F HG + +
Sbjct: 5 AASGSVLQRCIVSPAGRHSASLIFLHGSGDSGQGLRMWIKQVLNQDLTFQHIKIIYPTAP 64
Query: 118 ---INCNIFSYDYSGYDYSGYGISTGRP--------SEKNLYADIDAAWNTLRTRYGISP 166
+D + I+ P + L ID + GI
Sbjct: 65 PRSYTPMKGGISNVWFDR--FKITNDCPEHLESIDVMCQVLTDLIDEE-----VKSGIKK 117
Query: 167 ENIILYGQSIGTVPTIDLASRYQ--VGAVILHSPLMSGMRVAFPRTKRTWFFDVFPRVIF 224
I++ G S+G + LA R V V S ++
Sbjct: 118 NRILIGGFSMGGCMAMHLAYRNHQDVAGVFALS---------------SFL--------- 153
Query: 225 ANVKTPIMGLSTLENIDKVPKVTSPVLVIHGTEDEVIDLSHGIAIYER 272
+ + + K V + HGT DE++ S
Sbjct: 154 ------NKASAVYQALQKSNGVLPELFQCHGTADELVLHSWAEETNSM 195
>1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine
hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo
sapiens} SCOP: c.69.1.14
Length = 232
Score = 39.4 bits (92), Expect = 6e-04
Identities = 33/213 (15%), Positives = 58/213 (27%), Gaps = 68/213 (31%)
Query: 87 SPNARFTILFSHG---NAVDIGQMSS----------FFTGLGSRINCNIFSYDYSGYDYS 133
+ A ++F HG + + + N+ S +D
Sbjct: 19 ARKATAAVIFLHGLGDTGHGWAEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFD-- 76
Query: 134 GYGISTGRPSEKNLYADIDAAWNTLRT------RYGISPENIILYGQSIGTVPTIDLASR 187
I P + + I A ++ + GI IIL G S G
Sbjct: 77 ---IIGLSPDSQEDESGIKQAAENIKALIDQEVKNGIPSNRIILGGFSQG---------- 123
Query: 188 YQVGAVILHSPLMSGMRVAFPRTKRTWFFDVFPRVIFANVKTPIMGLST--------LEN 239
GA+ L++ L + ++A + LS +
Sbjct: 124 ---GALSLYTALTTQQKLAG-----------------------VTALSCWLPLRASFPQG 157
Query: 240 IDKVPKVTSPVLVIHGTEDEVIDLSHGIAIYER 272
+L HG D ++ L G E+
Sbjct: 158 PIGGANRDISILQCHGDCDPLVPLMFGSLTVEK 190
>3nuz_A Putative acetyl xylan esterase; structural genomics, joint center
for structural genomics, J protein structure initiative,
PSI-biology; 2.30A {Bacteroides fragilis}
Length = 398
Score = 39.7 bits (92), Expect = 7e-04
Identities = 28/154 (18%), Positives = 49/154 (31%), Gaps = 12/154 (7%)
Query: 124 SYDYSGYDYSGYGISTGRPSEKNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTID 183
+Y S Y + G N ++T+ I + I++ G S+GT P +
Sbjct: 187 GSNYDYDVVSRYLLELGWSYLGYASYLDMQVLNWMKTQKHIRKDRIVVSGFSLGTEPMMV 246
Query: 184 LASRY-QVGAVILHSPLMSGMRVAFPRTKRTWFFDVFPRVIFANVKTPIMGLSTLENIDK 242
L + + A + + L A T ++ P D
Sbjct: 247 LGTLDTSIYAFVYNDFLCQTQERAEVMTMPDKNGRRPFPNSIRHL-IPDF-WKNFNFPDI 304
Query: 243 V----PKVTSPVLVIHGTEDEVIDLSHGIAIYER 272
V P+ P+++ G D +DL Y
Sbjct: 305 VAALAPR---PIILTEGGLDRDLDLVR--KAYAI 333
>1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP:
c.69.1.14 PDB: 1aur_A*
Length = 218
Score = 39.0 bits (91), Expect = 8e-04
Identities = 26/150 (17%), Positives = 50/150 (33%), Gaps = 47/150 (31%)
Query: 135 YGISTGRPSEKNLYADIDAAWNTLRT------RYGISPENIILYGQSIGTVPTIDLASRY 188
Y I P+ +++ + + R GI I L G S G
Sbjct: 68 YDIKAMSPARSISLEELEVSAKMVTDLIEAQKRTGIDASRIFLAGFSQG----------- 116
Query: 189 QVGAVILHSPLMSGMRVAFPRTKRTWFFDVFPRVIFANVKTPIMGLST-LENIDKVPKVT 247
GAV+ H+ ++ + + ++ LST +++
Sbjct: 117 --GAVVFHTAFIN-----------------WQGPLGG-----VIALSTYAPTFGDELELS 152
Query: 248 S-----PVLVIHGTEDEVIDLSHGIAIYER 272
+ P L +HG D+V+ + G + +E
Sbjct: 153 ASQQRIPALCLHGQYDDVVQNAMGRSAFEH 182
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 39.6 bits (92), Expect = 0.001
Identities = 49/262 (18%), Positives = 72/262 (27%), Gaps = 99/262 (37%)
Query: 66 IEGFFTRTSRGNRLACMFMKCSPNARFTILFSHGNAVDIGQMSSF--FTGLGSRINCNIF 123
I+ + T R F K S +A LF AV G F G G N
Sbjct: 123 IKNYITARIMAKRP---FDKKSNSA----LF---RAVGEGNAQLVAIFGGQG-----NTD 167
Query: 124 SYDYSGYD-----YSGYGISTGRPSEKNLYADIDAAWNTLRTRYGISPENIILYGQSI-- 176
Y ++ Y Y +L I + TL + + ++ Q +
Sbjct: 168 DY----FEELRDLYQTY-----HVLVGDL---IKFSAETLSELIRTTLDAEKVFTQGLNI 215
Query: 177 -------GTVPTID-LAS--------------RYQVGAVILH-SP-----LMSGMRV--- 205
P D L S Y V A +L +P + G
Sbjct: 216 LEWLENPSNTPDKDYLLSIPISCPLIGVIQLAHYVVTAKLLGFTPGELRSYLKGATGHSQ 275
Query: 206 -----AFPRTKRTW--------------FF------DVFPRVIFANVKTPIMGLSTLENI 240
+W FF + +P P + +LEN
Sbjct: 276 GLVTAVAIAETDSWESFFVSVRKAITVLFFIGVRCYEAYPNTSLP----PSILEDSLENN 331
Query: 241 DKVPKVTSPVLVIHGTEDEVID 262
+ VP SP+L I E +
Sbjct: 332 EGVP---SPMLSISNLTQEQVQ 350
Score = 37.0 bits (85), Expect = 0.008
Identities = 35/190 (18%), Positives = 56/190 (29%), Gaps = 76/190 (40%)
Query: 53 KAEWQYGDNERSNIEGF-FTRTSRGNRLACMFMKCSPNARFTILFSHGNAVDIGQMSSFF 111
+ W DN + GF N P TI F G+
Sbjct: 1643 QDVWNRADNHFKDTYGFSILDIVINN----------PV-NLTIHFG-------GEK---- 1680
Query: 112 TGLGSRINCNIFSYDYSGYDYSGYGISTGRPSEKNLYADID------------------- 152
G RI N YS + G+ + ++ +I+
Sbjct: 1681 ---GKRIREN-----YSAMIFETI--VDGKLKTEKIFKEINEHSTSYTFRSEKGLLSATQ 1730
Query: 153 -----------AAWNTLRTRYGISPENIILYGQSIG--TVPTIDLASRYQVGAVILHSPL 199
AA+ L+++ G+ P + G S+G LAS + V+ +
Sbjct: 1731 FTQPALTLMEKAAFEDLKSK-GLIPADATFAGHSLGEYAA----LAS---LADVM---SI 1779
Query: 200 MSGMRVAFPR 209
S + V F R
Sbjct: 1780 ESLVEVVFYR 1789
Score = 31.2 bits (70), Expect = 0.51
Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 7/34 (20%)
Query: 145 KNLYADIDAA---WNT----LRTRYGISPENIIL 171
+LY AA WN + YG S +I++
Sbjct: 1633 MDLYKTSKAAQDVWNRADNHFKDTYGFSILDIVI 1666
>3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase,
hydrolase; 1.90A {Mycobacterium tuberculosis} PDB:
3e3a_A 3hys_A 3hzo_A
Length = 293
Score = 38.5 bits (90), Expect = 0.001
Identities = 18/120 (15%), Positives = 34/120 (28%), Gaps = 23/120 (19%)
Query: 176 IGTVPTIDLASRYQVGAVILHSPLMSGMRVAFPRTKRTWFFDVFPRVIFANVKTPIMGLS 235
+ T +D A ++ A SG+++ R + F R + ++
Sbjct: 141 MATRGRLDRARQFFNKAEAEL--YDSGVQLPPTYDARARLLENFSRKTLNDDVAVGDWIA 198
Query: 236 TLENI---------------------DKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCP 274
+ +PVLVI +D V G + + P
Sbjct: 199 MFSMWPIKSTPGLRCQLDCAPQTNRLPAYRNIAAPVLVIGFADDVVTPPYLGREVADALP 258
>3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure
initiative, PSI-2, structural midwest center for
structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus
anthracis}
Length = 278
Score = 37.7 bits (88), Expect = 0.002
Identities = 7/44 (15%), Positives = 11/44 (25%)
Query: 231 IMGLSTLENIDKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCP 274
+ + K+ V P + G D I P
Sbjct: 205 QVEYKDYDVRQKLKFVKIPSFIYCGKHDVQCPYIFSCEIANLIP 248
>1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI,
protei structure initiative; HET: MSE 3OH; 1.70A
{Escherichia coli} SCOP: c.69.1.26
Length = 258
Score = 37.6 bits (88), Expect = 0.003
Identities = 14/119 (11%), Positives = 33/119 (27%), Gaps = 20/119 (16%)
Query: 176 IGTVPTIDLASRYQVGAVILHSPLMSGMRVAFPRTKRTWFFDVFP------------RVI 223
+ + P + + + + RT + +
Sbjct: 105 VASSPCFSARDEWPGIKPDVLAGFQQQLSDDQQRTVERFLALQTMGTETARQDARALKKT 164
Query: 224 FANVKTP-----IMGLSTLENID---KVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCP 274
+ P GL L+ +D + V+ P L ++G D ++ + + P
Sbjct: 165 VLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWP 223
>1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate
complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12
Length = 273
Score = 37.3 bits (87), Expect = 0.003
Identities = 49/228 (21%), Positives = 73/228 (32%), Gaps = 72/228 (31%)
Query: 93 TILFSHGNAVDI----GQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSEKN-- 146
I+FSHG ++ QM F G R+ I +D G+G S+ +P N
Sbjct: 21 PIVFSHGWPLNADSWESQMI-FLAAQGYRV---I------AHDRRGHGRSS-QPWSGNDM 69
Query: 147 -LYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRYQ---VGAVIL---HSPL 199
YAD D A L + + +L+G S G R+ V L PL
Sbjct: 70 DTYAD-DLA--QLIEHLDL--RDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPL 124
Query: 200 M---------------SGMRVAFPRTKRTWFFDVFPRVIFANVKTP-------------- 230
M G+R A R+ + F P
Sbjct: 125 MLKTEANPGGLPMEVFDGIRQAS-LADRSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWL 183
Query: 231 -------------IMGLSTLENIDKVPKVTSPVLVIHGTEDEVIDLSH 265
I S + + + K+ P LV+HG D+V+ +
Sbjct: 184 QGMAAGHKNAYDCIKAFSETDFTEDLKKIDVPTLVVHGDADQVVPIEA 231
>3bxp_A Putative lipase/esterase; putative carboxylesterase, structural
genomics, joint center structural genomics, JCSG; HET:
EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A*
Length = 277
Score = 37.1 bits (86), Expect = 0.004
Identities = 24/152 (15%), Positives = 43/152 (28%), Gaps = 36/152 (23%)
Query: 149 ADIDAAWNTLRTR---YGISPENIILYGQSIG--------TVPTIDLASRY--------Q 189
+ A + + T+ + + + IIL G S G V T Q
Sbjct: 88 QQLGATIDWITTQASAHHVDCQRIILAGFSAGGHVVATYNGVATQPELRTRYHLDHYQGQ 147
Query: 190 VGAVILHSPLMSGMRVAFPRTKRTWFFDVFPRVIFANVKTPIMGLSTLENIDKVPKVTSP 249
A+IL P++ + FP T + T + V + P
Sbjct: 148 HAAIILGYPVID-LTAGFPTTSAA----------RNQITTDARLWA---AQRLVTPASKP 193
Query: 250 VLVIHGTEDEVIDLSHGIAIYERCPR---PVE 278
V DE + + + + +
Sbjct: 194 AFVWQTATDESVPPINSLKYVQAMLQHQVATA 225
>1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida}
PDB: 4dgq_A
Length = 276
Score = 36.1 bits (84), Expect = 0.007
Identities = 7/29 (24%), Positives = 17/29 (58%)
Query: 241 DKVPKVTSPVLVIHGTEDEVIDLSHGIAI 269
+ + + PVLV+HG +D+++ + +
Sbjct: 210 EDLKGIQQPVLVMHGDDDQIVPYENSGVL 238
>2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase,
putative lipase; HET: CME CSO; 1.90A {Saccharomyces
cerevisiae} PDB: 2y6v_A*
Length = 398
Score = 36.3 bits (83), Expect = 0.008
Identities = 18/155 (11%), Positives = 42/155 (27%), Gaps = 12/155 (7%)
Query: 87 SPNARFTILFSHGNAVDIGQMSSFFTGLGSRINCN------IFSYDYSGYDYSGYGISTG 140
R ++F HG+ + + L + + D + S
Sbjct: 48 RTATRLNLVFLHGSGMSKVVWEYYLPRLVAADAEGNYAIDKVLLIDQVNHGDSAVRNRGR 107
Query: 141 RPSEKN---LYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRYQ--VGAVIL 195
+ N D+ P ++ G S+G + +IL
Sbjct: 108 LGTNFNWIDGARDVLKIATCELGSIDSHPALNVVIGHSMGGFQALACDVLQPNLFHLLIL 167
Query: 196 HSP-LMSGMRVAFPRTKRTWFFDVFPRVIFANVKT 229
P +++ + R P ++ +++
Sbjct: 168 IEPVVITRKAIGAGRPGLPPDSPQIPENLYNSLRL 202
Score = 33.2 bits (75), Expect = 0.096
Identities = 6/47 (12%), Positives = 12/47 (25%), Gaps = 1/47 (2%)
Query: 238 ENIDKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPRPVEPLWVEG 284
I V V + I G + + + + + G
Sbjct: 275 FLISNVKFVRKRTIHIVGARSNWCPPQNQLFLQKTLQN-YHLDVIPG 320
>4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural
genomics, joint cente structural genomics, JCSG; HET:
MSE; 1.15A {Legionella pneumophila subsp}
Length = 377
Score = 36.0 bits (82), Expect = 0.011
Identities = 13/74 (17%), Positives = 22/74 (29%), Gaps = 3/74 (4%)
Query: 200 MSGMRVAFPRTKRTWFFDVFPRVIFANVKTPIMGLSTLENI-DKVPKVTSPVLVIHGTED 258
+ + A P+ F F I + L N D P P+L++ D
Sbjct: 261 VDEILQALPQDPLLIFQPKFSNGIISKTDRNTEILKINFNHYDFKPTA--PLLLVGTKGD 318
Query: 259 EVIDLSHGIAIYER 272
+ + Y
Sbjct: 319 RDVPYAGAEMAYHS 332
>1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region;
esterase, lipase, serine hydrolase, structural genomics;
HET: LI5; 1.70A {Saccharomyces cerevisiae}
Length = 243
Score = 35.7 bits (81), Expect = 0.012
Identities = 20/219 (9%), Positives = 57/219 (26%), Gaps = 31/219 (14%)
Query: 63 RSNIEGFFTRTSRGNRLACMFMKCSPNARFTILFSHGNAVDIGQMSSFFTGLGSRINCNI 122
N + F ++S K A + + + F
Sbjct: 15 LQNGKVFSEKSSG-------IRKLLKKANVQCDYIDAPVLLEKKDLPFEMD--------- 58
Query: 123 FSYDYSGYDYSGYGISTGRPSEKNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTI 182
+ + + SE + DI ++ + + G S G +
Sbjct: 59 -DEKWQATLDADVNRAWFYHSEISHELDISEGLKSVVDHIKANGPYDGIVGLSQGAALSS 117
Query: 183 DLASRYQVGAVILHSPLMSGMRVAFPRTKRTWFFDVFPRVIFANVKTPIMGLST--LENI 240
+ ++ + P+ K + + + ++ ++
Sbjct: 118 IITNKIS------------ELVPDHPQFKVSVVISGYSFTEPDPEHPGELRITEKFRDSF 165
Query: 241 DKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPRPVEP 279
P + + ++ I+G D+ + +Y+ +
Sbjct: 166 AVKPDMKTKMIFIYGASDQAVPSVRSKYLYDIYLKAQNG 204
>1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A
{Streptomyces aureofaciens} SCOP: c.69.1.12
Length = 274
Score = 35.4 bits (82), Expect = 0.013
Identities = 36/227 (15%), Positives = 70/227 (30%), Gaps = 71/227 (31%)
Query: 93 TILFSHGNAVDI----GQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSEKN-- 146
++F HG ++ Q+ G R I +D G+G ST +
Sbjct: 21 PVVFIHGWPLNGDAWQDQLK-AVVDAGYRG---I------AHDRRGHGHST-PVWDGYDF 69
Query: 147 -LYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRYQ---VGAVIL---HSPL 199
+AD D L T + ++ L S+G R+ + + +L P+
Sbjct: 70 DTFAD-DLN--DLLTDLDL--RDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPV 124
Query: 200 MS---------------GMRVAFPRTKRTWFFDVFPRVIFANVKTP-------------- 230
M ++ T+R+ F+ F+ +
Sbjct: 125 MIKSDKNPDGVPDEVFDALKNGV-LTERSQFWKDTAEGFFSANRPGNKVTQGNKDAFWYM 183
Query: 231 ------------IMGLSTLENIDKVPKVTSPVLVIHGTEDEVIDLSH 265
+ + + + K P LV+HG +D+V+ +
Sbjct: 184 AMAQTIEGGVRCVDAFGYTDFTEDLKKFDIPTLVVHGDDDQVVPIDA 230
>3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog,
hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas
fluorescens} PDB: 1va4_A 3hi4_A 3hea_A
Length = 271
Score = 35.3 bits (82), Expect = 0.013
Identities = 8/35 (22%), Positives = 16/35 (45%)
Query: 231 IMGLSTLENIDKVPKVTSPVLVIHGTEDEVIDLSH 265
+ + + + K+ P LVIHG D+++
Sbjct: 195 VTAFAETDFRPDMAKIDVPTLVIHGDGDQIVPFET 229
>2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center
for structural genomics, JCSG, protein structure INI
PSI-2; HET: MSE; 1.92A {Anabaena variabilis}
Length = 223
Score = 35.3 bits (81), Expect = 0.013
Identities = 18/118 (15%), Positives = 33/118 (27%), Gaps = 13/118 (11%)
Query: 88 PNARFTILFSHGNAVD-----IGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRP 142
A +LF+HG+ ++ G D + + T
Sbjct: 32 NGATGIVLFAHGSGSSRYSPRNRYVAEVLQQAG----LATLLIDLLTQEEEEIDLRTRHL 87
Query: 143 SE--KNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRY--QVGAVILH 196
L + + A + L + +G S G + A+ V AV+
Sbjct: 88 RFDIGLLASRLVGATDWLTHNPDTQHLKVGYFGASTGGGAALVAAAERPETVQAVVSR 145
>3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT
peroxidase, oxidoreductase; 1.74A {Bacillus anthracis
str}
Length = 281
Score = 35.1 bits (81), Expect = 0.018
Identities = 7/25 (28%), Positives = 11/25 (44%)
Query: 241 DKVPKVTSPVLVIHGTEDEVIDLSH 265
+ K P L+IHG D + +
Sbjct: 215 KDLEKFNIPTLIIHGDSDATVPFEY 239
>1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP:
c.69.1.16
Length = 262
Score = 35.0 bits (80), Expect = 0.018
Identities = 29/196 (14%), Positives = 59/196 (30%), Gaps = 55/196 (28%)
Query: 94 ILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSEKNLYADIDA 153
++ S G ++ L S+ G+ +T + + +
Sbjct: 57 VVISPGFTAYQSSIAWLGPRLASQ-----------GFVVFTIDTNTTLDQPDSRGRQLLS 105
Query: 154 AWNTLRTRY----GISPENIILYGQSIGTVPTIDLA-SRYQVGAVILHSPLMSGMRVAFP 208
A + L R + + + G S+G +++ A SR + A I +
Sbjct: 106 ALDYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRTSLKAAIPLTG---------- 155
Query: 209 RTKRTWFFDVFPRVIFANVKTPIMGLSTLENIDKVPKVTSPVLVIHGTEDEVIDL-SHGI 267
W D ++ +P LV+ D V + +H
Sbjct: 156 -----WNTDKTWP-----------------------ELRTPTLVVGADGDTVAPVATHSK 187
Query: 268 AIYERCPRPVEPLWVE 283
YE P ++ ++E
Sbjct: 188 PFYESLPGSLDKAYLE 203
>3bjr_A Putative carboxylesterase; structural genomics, joint center for
structural genomics, J protein structure initiative,
PSI-2; 2.09A {Lactobacillus plantarum WCFS1}
Length = 283
Score = 35.2 bits (81), Expect = 0.018
Identities = 25/151 (16%), Positives = 43/151 (28%), Gaps = 35/151 (23%)
Query: 149 ADIDAAWNTLR---TRYGISPENIILYGQSIG--------TVPTIDLASRYQVG------ 191
D+ A N LR + I P+ I G S+G +A+ V
Sbjct: 103 LDLGRAVNLLRQHAAEWHIDPQQITPAGFSVGGHIVALYNDYWATRVATELNVTPAMLKP 162
Query: 192 -AVILHSPLMSGMRVAFPRTKRTWFFDVFPRVIFANVKTPIMGLSTLENIDKVPKVTSPV 250
V+L P++S + + P L V P
Sbjct: 163 NNVVLGYPVISPLLGFPKDDATLATWTPTPN--------------ELAADQHVNSDNQPT 208
Query: 251 LVIHGTEDEVIDLSHGIAIYERCPR---PVE 278
+ +D ++ ++ +A P E
Sbjct: 209 FIWTTADDPIVPATNTLAYATALATAKIPYE 239
>3nwo_A PIP, proline iminopeptidase; structural genomics, seattle
structural genomics center for infectious disease,
ssgcid, mycobac smegmatis; 1.90A {Mycobacterium
smegmatis}
Length = 330
Score = 35.1 bits (81), Expect = 0.020
Identities = 16/58 (27%), Positives = 22/58 (37%), Gaps = 2/58 (3%)
Query: 206 AFPRTKRTWFFDVFPRVIF--ANVKTPIMGLSTLENIDKVPKVTSPVLVIHGTEDEVI 261
F + + N + L ID++P VT+PVLVI G DE
Sbjct: 220 DFADSVAQMEAEPTVYHTMNGPNEFHVVGTLGDWSVIDRLPDVTAPVLVIAGEHDEAT 277
>1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A
{Streptomyces lividans} SCOP: c.69.1.12
Length = 275
Score = 34.9 bits (81), Expect = 0.021
Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 241 DKVPKVTSPVLVIHGTEDEVIDLSH-GIAIYERCPR 275
D + ++ PVLV HGT+D+V+ + E
Sbjct: 209 DDLKRIDVPVLVAHGTDDQVVPYADAAPKSAELLAN 244
>3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural
genomics, PSI-biology, NEW YORK structural genomi
research consortium; 2.10A {Escherichia coli SE11}
Length = 268
Score = 34.5 bits (80), Expect = 0.023
Identities = 5/34 (14%), Positives = 15/34 (44%)
Query: 241 DKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCP 274
++ PV +I ++D ++ + ++ P
Sbjct: 194 HHADRIRCPVQIICASDDLLVPTACSSELHAALP 227
>3r0v_A Alpha/beta hydrolase fold protein; structural genomics,
PSI-biology, protein structure initiati alpha/beta
hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus}
Length = 262
Score = 34.6 bits (80), Expect = 0.024
Identities = 5/35 (14%), Positives = 11/35 (31%)
Query: 241 DKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPR 275
+ ++ P LV+ G + + P
Sbjct: 200 ARFASISIPTLVMDGGASPAWIRHTAQELADTIPN 234
>3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure
initiative, MI center for structural genomics, MCSG;
HET: MES; 2.25A {Pseudomonas aeruginosa}
Length = 266
Score = 34.5 bits (80), Expect = 0.024
Identities = 31/183 (16%), Positives = 48/183 (26%), Gaps = 44/183 (24%)
Query: 130 YDYSGYGIS---TGRPSEKNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLAS 186
YD G+G S G + L D+ L + G S+G + LA
Sbjct: 59 YDARGHGASSVPPGPYTLARLGEDVLE----LLDALEV--RRAHFLGLSLGGIVGQWLAL 112
Query: 187 RY--QVGAVIL------------------HSPLMSGMRVAFPRTKRTWFFDVFP------ 220
++ ++L M WF
Sbjct: 113 HAPQRIERLVLANTSAWLGPAAQWDERIAAVLQAEDMSETAAGFLGNWFPPALLERAEPV 172
Query: 221 --RVIFANVKTP-------IMGLSTLENIDKVPKVTSPVLVIHGTEDEVIDLSHGIAIYE 271
R + T + + ++ ++ P LVI G D V SHG I
Sbjct: 173 VERFRAMLMATNRHGLAGSFAAVRDTDLRAQLARIERPTLVIAGAYDTVTAASHGELIAA 232
Query: 272 RCP 274
Sbjct: 233 SIA 235
>1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta
hydrolase, signaling protein; 2.50A {Bacillus subtilis}
PDB: 1wpr_A*
Length = 271
Score = 34.5 bits (80), Expect = 0.026
Identities = 8/34 (23%), Positives = 18/34 (52%)
Query: 241 DKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCP 274
+ + KVT P L++ +D + + G +++ P
Sbjct: 204 EDLSKVTVPSLILQCADDIIAPATVGKYMHQHLP 237
>3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A
{Escherichia coli} PDB: 3bf8_A
Length = 255
Score = 34.3 bits (79), Expect = 0.029
Identities = 9/50 (18%), Positives = 17/50 (34%)
Query: 226 NVKTPIMGLSTLENIDKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPR 275
NV + +K+P P L I G + + + + P+
Sbjct: 174 NVPVLWDQYPHIVGWEKIPAWDHPALFIPGGNSPYVSEQYRDDLLAQFPQ 223
>3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for
structu genomics, MCSG, alpha-beta hydrolase fold,
hydrolase; 2.00A {Oleispira antarctica}
Length = 282
Score = 34.5 bits (80), Expect = 0.029
Identities = 6/34 (17%), Positives = 14/34 (41%)
Query: 241 DKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCP 274
+ +++P L+ +D + G + E P
Sbjct: 212 SLLEDISTPALIFQSAKDSLASPEVGQYMAENIP 245
>1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free
haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12
PDB: 1hl7_A*
Length = 279
Score = 34.3 bits (79), Expect = 0.030
Identities = 7/26 (26%), Positives = 16/26 (61%)
Query: 238 ENIDKVPKVTSPVLVIHGTEDEVIDL 263
+++ V P L++HGT+D ++ +
Sbjct: 210 SDVEAVRAAGKPTLILHGTKDNILPI 235
>1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta
hydrolase fold, mutant M99T; 1.50A {Streptomyces
aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A
Length = 277
Score = 34.2 bits (79), Expect = 0.031
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 244 PKVTSPVLVIHGTEDEVIDLSH 265
P++ P L++HGT D + + +
Sbjct: 214 PRIDVPALILHGTGDRTLPIEN 235
>3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta
hydrolase, PLP degradation, E-2-
(acetamidomethylene)succinate; 2.26A {Mesorhizobium
loti}
Length = 314
Score = 33.9 bits (78), Expect = 0.042
Identities = 7/35 (20%), Positives = 13/35 (37%)
Query: 241 DKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPR 275
VT PVL++ G +++ + P
Sbjct: 249 PAYRDVTKPVLIVRGESSKLVSAAALAKTSRLRPD 283
>3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase
BPO-A2 and matrix...; protein design, bionanotechnology;
3.00A {Streptomyces aureofaciens} PDB: 4d9j_A
Length = 456
Score = 34.4 bits (79), Expect = 0.042
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 244 PKVTSPVLVIHGTEDEVIDLSH 265
P++ P L++HGT D + + +
Sbjct: 215 PRIDVPALILHGTGDRTLPIEN 236
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta
propeller, hydrolase, oligop SIZE selectivity; HET: GOL;
1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A*
1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Length = 582
Score = 34.4 bits (79), Expect = 0.042
Identities = 5/30 (16%), Positives = 11/30 (36%)
Query: 243 VPKVTSPVLVIHGTEDEVIDLSHGIAIYER 272
V ++ P+ +IH L + +
Sbjct: 509 VDRIKEPLALIHPQNASRTPLKPLLRLMGE 538
>2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism;
1.90A {Burkholderia xenovorans}
Length = 266
Score = 33.8 bits (78), Expect = 0.047
Identities = 9/44 (20%), Positives = 16/44 (36%)
Query: 231 IMGLSTLENIDKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCP 274
+ + + P + P LVI GT D + G + +
Sbjct: 190 CEAIDAADLRPEAPGIKVPALVISGTHDLAATPAQGRELAQAIA 233
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural
genomics, joint center structural genomics, JCSG; HET:
MSE; 1.50A {Pseudomonas aeruginosa}
Length = 315
Score = 33.6 bits (77), Expect = 0.050
Identities = 4/39 (10%), Positives = 12/39 (30%)
Query: 241 DKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPRPVEP 279
++ ++ P L++ G +D +
Sbjct: 232 YELDRLQMPTLLLIGEKDNTAIGKDAAPAELKARLGNYA 270
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces
morookaensis} PDB: 3azp_A 3azq_A
Length = 662
Score = 34.0 bits (78), Expect = 0.051
Identities = 8/33 (24%), Positives = 13/33 (39%)
Query: 240 IDKVPKVTSPVLVIHGTEDEVIDLSHGIAIYER 272
+ + +V P L++ G ED V E
Sbjct: 575 LTRADRVRVPFLLLQGLEDPVCPPEQCDRFLEA 607
>2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone
biosynthesis, lyase; 1.94A {Staphylococcus aureus}
Length = 269
Score = 33.1 bits (76), Expect = 0.075
Identities = 18/131 (13%), Positives = 37/131 (28%), Gaps = 22/131 (16%)
Query: 166 PENI---ILYGQSIGTVPTIDLASRYQVGAVILHSPLMSGMRVAFPRTKRTWFFDVF--- 219
I IL S G + R V ++G+ + ++ F
Sbjct: 105 HIPISNLILESTSPGIKEEANQLERRLVDDARAKVLDIAGIELFVNDWEKLPLFQSQLEL 164
Query: 220 PRVIFANVKTPIMG------LSTLENI---------DKVPKVTSPVLVIHGTEDEVIDLS 264
P I ++ + L + ++ ++ P L++ G DE +
Sbjct: 165 PVEIQHQIRQQRLSQSPHKMAKALRDYGTGQMPNLWPRLKEIKVPTLILAGEYDEKF-VQ 223
Query: 265 HGIAIYERCPR 275
+ P
Sbjct: 224 IAKKMANLIPN 234
>4e15_A Kynurenine formamidase; alpha/beta hydrolase fold,
hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A
{Drosophila melanogaster} PDB: 4e14_A* 4e11_A
Length = 303
Score = 33.0 bits (75), Expect = 0.10
Identities = 18/156 (11%), Positives = 39/156 (25%), Gaps = 32/156 (20%)
Query: 149 ADIDAAWNTLRT---RYGISPENIILYGQSIGTVPTIDLASR---------YQVGAVILH 196
N + +S + G G + R V A+I
Sbjct: 133 TQFTHFLNWIFDYTEMTKVSS--LTFAGHXAGAHLLAQILMRPNVITAQRSKMVWALIFL 190
Query: 197 SPL-----MSGMRVAFPRTKRTWFFDVFPRVIFANVKTPIMGLSTLENIDKVPKVTSPVL 251
+ +S + P+ + R I + +P+ E D ++ +
Sbjct: 191 CGVYDLRELSNLESVNPKN----ILGLNERNIESV--SPM----LWEYTDVTVWNSTKIY 240
Query: 252 VIHGTEDEVIDLSHGIAIYERCPR---PVEPLWVEG 284
V+ D + + + +G
Sbjct: 241 VVAAEHDSTTFIEQSRHYADVLRKKGYKASFTLFKG 276
>2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase,
alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter
nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A*
Length = 276
Score = 32.4 bits (74), Expect = 0.12
Identities = 22/187 (11%), Positives = 42/187 (22%), Gaps = 48/187 (25%)
Query: 130 YDYSGYGIS---TGRPSEKNLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLAS 186
++ G+G+S + D + + G+ E + S G ++L
Sbjct: 59 PNWRGHGLSPSEVPDFGYQEQVKDALE----ILDQLGV--ETFLPVSHSHGGWVLVELLE 112
Query: 187 RYQ---VGAVILHSPLMSGMRVAFPRTKRT--------WFFDVFPRVIFANVKTPIMGLS 235
+ I+ LM + F ++ V +
Sbjct: 113 QAGPERAPRGIIMDWLMWAPKPDFAKSLTLLKDPERWREGTHGLFDVWLDGHDEKRVRHH 172
Query: 236 TLENIDKVP----------------------------KVTSPVLVIHGTEDEVIDLSHGI 267
LE + T P+ I E
Sbjct: 173 LLEEMADYGYDCWGRSGRVIEDAYGRNGSPMQMMANLTKTRPIRHIFSQPTEPEYEKINS 232
Query: 268 AIYERCP 274
E+ P
Sbjct: 233 DFAEQHP 239
>3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A
{Mycobacterium tuberculosis}
Length = 330
Score = 32.4 bits (74), Expect = 0.14
Identities = 10/63 (15%), Positives = 21/63 (33%), Gaps = 11/63 (17%)
Query: 213 TWFFDVFPRVIFANVKTPIMGLSTLENIDKVPKVTSPVLVIHGTEDEVIDLSHGIAIYER 272
W +D F + GL D V +++P+ ++ G + ++ R
Sbjct: 246 VWRYD--AIRTFGD----FAGLW-----DDVDALSAPITLVRGGSSGFVTDQDTAELHRR 294
Query: 273 CPR 275
Sbjct: 295 ATH 297
>2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural
genomics, joint center for structural genomics, JCSG;
HET: MSE PGE; 1.96A {Bacillus subtilis}
Length = 306
Score = 32.3 bits (74), Expect = 0.16
Identities = 5/41 (12%), Positives = 15/41 (36%)
Query: 232 MGLSTLENIDKVPKVTSPVLVIHGTEDEVIDLSHGIAIYER 272
G + +++ P+L++ G + + D +
Sbjct: 231 DGFPYVFTDEELRSARVPILLLLGEHEVIYDPHSALHRASS 271
>3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta
hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris}
PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A
Length = 306
Score = 32.3 bits (74), Expect = 0.17
Identities = 6/41 (14%), Positives = 16/41 (39%)
Query: 244 PKVTSPVLVIHGTEDEVIDLSHGIAIYERCPRPVEPLWVEG 284
K+ P+L + G + + ++ + V+ +E
Sbjct: 240 NKIPVPMLALWGASGIAQSAATPLDVWRKWASDVQGAPIES 280
>2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold;
1.90A {Plesiocystis pacifica}
Length = 297
Score = 31.7 bits (72), Expect = 0.22
Identities = 27/205 (13%), Positives = 56/205 (27%), Gaps = 60/205 (29%)
Query: 131 DYSGYGISTGRPSEK------NLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDL 184
D G+G S +P++ + A + L+ E + L Q G + + L
Sbjct: 80 DLFGFGRS-DKPTDDAVYTFGFHRRSLLAFLDALQ------LERVTLVCQDWGGILGLTL 132
Query: 185 ASRYQ---VGAVILHSPLMSGMRVAFPRTK-RTWFFD--VFPRVIFANVKTPIMGLSTLE 238
+++++ L G+ R + + P G++ E
Sbjct: 133 PVDRPQLVDRLIVMNTALAVGLSPGKGFESWRDFVANSPDLDVGKLMQRAIP--GITDAE 190
Query: 239 ----------------------NIDKVP-----------------KVTSPVLVIHGTEDE 259
+ P + + P + G +D
Sbjct: 191 VAAYDAPFPGPEFKAGVRRFPAIVPITPDMEGAEIGRQAMSFWSTQWSGPTFMAVGAQDP 250
Query: 260 VIDLSHGIAIYERCPRPVEPLWVEG 284
V+ + + EP+ VE
Sbjct: 251 VLGPEVMGMLRQAIRGCPEPMIVEA 275
>3aqu_A AT4G19810; stress response, TIM barrel, hydrolase, chitin; HET:
FLC; 2.01A {Arabidopsis thaliana}
Length = 356
Score = 31.5 bits (72), Expect = 0.27
Identities = 14/64 (21%), Positives = 27/64 (42%), Gaps = 14/64 (21%)
Query: 121 NIFSYDYSGYDYSGYGISTGRPSEKNLYADIDAAWNTLRT-----RYGISPENIIL---- 171
N+ +YD+ G +S TG P+ L+ +A + + G+ + +L
Sbjct: 181 NLMAYDFYGPGWSRV---TGPPA--ALFDPSNAGPSGDAGTRSWIQAGLPAKKAVLGFPY 235
Query: 172 YGQS 175
YG +
Sbjct: 236 YGYA 239
>3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A
{Burkholderia SP} PDB: 1y37_A
Length = 304
Score = 31.5 bits (72), Expect = 0.27
Identities = 8/44 (18%), Positives = 15/44 (34%)
Query: 241 DKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPRPVEPLWVEG 284
D +V P LV G+ + L ++ + + G
Sbjct: 226 DLGRQVQCPALVFSGSAGLMHSLFEMQVVWAPRLANMRFASLPG 269
>3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP}
Length = 291
Score = 31.1 bits (71), Expect = 0.32
Identities = 9/44 (20%), Positives = 17/44 (38%)
Query: 241 DKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPRPVEPLWVEG 284
D K++ PVLV+ G + + +A + V +
Sbjct: 225 DMKQKISCPVLVLWGEKGIIGRKYDVLATWRERAIDVSGQSLPC 268
>2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold,
structural genomics, joint cente structural genomics,
JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2
Length = 262
Score = 31.0 bits (70), Expect = 0.33
Identities = 21/136 (15%), Positives = 32/136 (23%), Gaps = 16/136 (11%)
Query: 149 ADIDAAWNTLRTRYGISPENIILYGQSIG----TVPTIDLASRYQVGAVILHSPLMSGMR 204
I A I+L G S G VGA I + +S +
Sbjct: 114 QQISQAVTAAAKEI---DGPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLS 170
Query: 205 VAFPRTKRTWFFDVFPRVIFANVKTPIMGLSTLENIDKVPKVTSPVLVIHGTEDEVIDLS 264
P F + S ++ + + V V G + L
Sbjct: 171 DLRP------LLRTSMNEKFKMDADAAIAESP---VEMQNRYDAKVTVWVGGAERPAFLD 221
Query: 265 HGIAIYERCPRPVEPL 280
I + E
Sbjct: 222 QAIWLVEAWDADHVIA 237
>1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged
active site, prolyl peptidase; 1.80A {Thermoplasma
acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A
1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A*
1xqx_A* 1xqy_A 1xqv_A
Length = 293
Score = 31.0 bits (71), Expect = 0.34
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 240 IDKVPKVTSPVLVIHGTEDEV 260
DK+ + P L+ G DEV
Sbjct: 226 TDKISAIKIPTLITVGEYDEV 246
>2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB:
3cxu_A*
Length = 328
Score = 30.4 bits (69), Expect = 0.54
Identities = 11/47 (23%), Positives = 16/47 (34%), Gaps = 6/47 (12%)
Query: 244 PKVTSPVLVIHGTEDEVI------DLSHGIAIYERCPRPVEPLWVEG 284
+V P I G D V + H + P E + +EG
Sbjct: 258 AQVKVPTKFIVGEFDLVYHIPGAKEYIHNGGFKKDVPLLEEVVVLEG 304
>3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading
enzyme, RICE, virulence, innate immune responses,
pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A
3h2k_A* 3h2h_A 3h2i_A
Length = 397
Score = 29.9 bits (66), Expect = 0.86
Identities = 10/65 (15%), Positives = 21/65 (32%), Gaps = 3/65 (4%)
Query: 209 RTKRTWFFDVFPRVIFANVKTPIMGLSTLENI-DKVPKVTSPVLVIHGTEDEVIDLSHGI 267
+++F F +N P N+ + P+ P L+ + D + L +
Sbjct: 288 DKVKSYFQPGFYSDFPSNPANPFRQDLARNNLLEWAPQT--PTLLCGSSNDATVPLKNAQ 345
Query: 268 AIYER 272
Sbjct: 346 TAIAS 350
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 29.8 bits (66), Expect = 1.1
Identities = 13/107 (12%), Positives = 30/107 (28%), Gaps = 30/107 (28%)
Query: 126 DYSGYDYSGYGISTGRPSEK-----NLYADIDAAWNTLRTRYGISPEN-----------I 169
Y Y + G+ + E+ ++ D + + R+ + N +
Sbjct: 471 QYF-YSHIGHHLKNIEHPERMTLFRMVFLDFR--FLEQKIRHDSTAWNASGSILNTLQQL 527
Query: 170 ILYGQSIGTVPTIDLASRY---------QVGAVILHSPLMSGMRVAF 207
Y I R ++ ++ S +R+A
Sbjct: 528 KFYKPYI--CDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIAL 572
>1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid
degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP:
b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A*
Length = 452
Score = 29.3 bits (65), Expect = 1.4
Identities = 21/89 (23%), Positives = 34/89 (38%), Gaps = 4/89 (4%)
Query: 91 RFTILFSHG--NAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSEKNLY 148
R T HG + + G + + N D+ + Y + + + +
Sbjct: 70 RKTRFIVHGFIDKGEDGWLLDMCKKMFQVEKVNCICVDWRRGSRTEY--TQASYNTRVVG 127
Query: 149 ADIDAAWNTLRTRYGISPENIILYGQSIG 177
A+I L T G SPEN+ L G S+G
Sbjct: 128 AEIAFLVQVLSTEMGYSPENVHLIGHSLG 156
>3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase,
decarboxylase, sulfate elimination, terminal alkene
production; 1.68A {Lyngbya majuscula 19L}
Length = 286
Score = 29.2 bits (66), Expect = 1.6
Identities = 3/40 (7%), Positives = 15/40 (37%), Gaps = 1/40 (2%)
Query: 245 KVTSPVLVIHGTEDEVIDLSHGIAIYERCPRPVEPLWVEG 284
+ P +++G ++ + + + +++ G
Sbjct: 229 SIQVPTTLVYGDSSKLN-RPEDLQQQKMTMTQAKRVFLSG 267
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich,
structural genomics, PSI-2, prote structure initiative;
1.74A {Klebsiella pneumoniae subsp}
Length = 241
Score = 28.8 bits (65), Expect = 1.8
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 240 IDKVPKVTSPVLVIHGTEDEVIDL 263
+D + +PVL ++G +D I
Sbjct: 162 VDIAVDLNAPVLGLYGAKDASIPQ 185
>3sim_A Protein, family 18 chitinase; family 18 plant chitinase, TIM
barrel, chitin binding, glyco hydrolase, hydrolase;
2.10A {Crocus vernus}
Length = 275
Score = 28.6 bits (64), Expect = 2.2
Identities = 8/59 (13%), Positives = 17/59 (28%), Gaps = 5/59 (8%)
Query: 121 NIFSYDYSGYDYSGYGISTGRPSEKNLYADIDAAWNTLRTRYGISPENIIL----YGQS 175
N +Y + YD S + N + + G P + + + +
Sbjct: 181 NHINYQFKAYDSST-SVDKFLGYYNNAASKYKGGNVLISFSTGPHPGGLPVDKGFFDAA 238
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna; HET:
CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 28.0 bits (61), Expect = 2.3
Identities = 7/25 (28%), Positives = 11/25 (44%), Gaps = 3/25 (12%)
Query: 234 LSTLENIDKV--PKVTSPVLVIHGT 256
L L+ K+ ++P L I T
Sbjct: 22 LKKLQASLKLYADD-SAPALAIKAT 45
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D
structure, serine esterase, HYD aromatic hydrocarbons,
catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A*
1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A
1ggv_A*
Length = 236
Score = 28.4 bits (64), Expect = 2.3
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 233 GLSTLENIDKVPKVTSPVLVIHGTEDEVIDLS 264
G+ + ++KVP+V P L G +D +
Sbjct: 146 GVGLEKQLNKVPEVKHPALFHMGGQDHFVPAP 177
>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism,
detoxification, magnesium, metal-binding, peroxisome;
HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P*
1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A*
1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*
Length = 555
Score = 28.7 bits (64), Expect = 2.8
Identities = 6/31 (19%), Positives = 13/31 (41%)
Query: 244 PKVTSPVLVIHGTEDEVIDLSHGIAIYERCP 274
K+ P L++ +D V+ + + P
Sbjct: 482 RKILIPALMVTAEKDFVLVPQMSQHMEDWIP 512
>1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation,
pancreas, glycoprotein, chimeric; 2.01A {Cavia
porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B*
1n8s_A
Length = 432
Score = 28.0 bits (62), Expect = 3.6
Identities = 18/89 (20%), Positives = 35/89 (39%), Gaps = 4/89 (4%)
Query: 91 RFTILFSHG--NAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSEKNLY 148
R T HG ++ + +S + N D+ G + Y ++ + +
Sbjct: 70 RKTRFIIHGFTDSGENSWLSDMCKNMFQVEKVNCICVDWKGGSKAQYSQASQNI--RVVG 127
Query: 149 ADIDAAWNTLRTRYGISPENIILYGQSIG 177
A++ L T +PEN+ + G S+G
Sbjct: 128 AEVAYLVQVLSTSLNYAPENVHIIGHSLG 156
>1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold,
epoxide degradation, epichlorohydrin; 2.10A
{Agrobacterium tumefaciens} SCOP: c.69.1.11
Length = 294
Score = 28.0 bits (63), Expect = 3.7
Identities = 7/41 (17%), Positives = 12/41 (29%)
Query: 244 PKVTSPVLVIHGTEDEVIDLSHGIAIYERCPRPVEPLWVEG 284
PV +I G D + + I + +E
Sbjct: 232 TMSDLPVTMIWGLGDTCVPYAPLIEFVPKYYSNYTMETIED 272
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53,
CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3
PDB: 1fhl_A
Length = 334
Score = 27.8 bits (61), Expect = 4.4
Identities = 10/64 (15%), Positives = 22/64 (34%), Gaps = 6/64 (9%)
Query: 100 NAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSEKNLYADIDAAWNTLR 159
+ Q + F+ + + +DY G Y Y + + +L + L+
Sbjct: 182 DGWSWDQQNYFYETVLATGELLSTDFDYFGVSY--YPFYSASATLASLKTSL----ANLQ 235
Query: 160 TRYG 163
+ Y
Sbjct: 236 STYD 239
>1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus}
SCOP: b.12.1.2 c.69.1.19
Length = 449
Score = 27.7 bits (61), Expect = 4.9
Identities = 16/89 (17%), Positives = 36/89 (40%), Gaps = 4/89 (4%)
Query: 91 RFTILFSHG--NAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSEKNLY 148
R T HG + + +S+ + + N D+ + Y ++ + +
Sbjct: 69 RKTRFIIHGFIDKGEESWLSTMCQNMFKVESVNCICVDWKSGSRTAYSQASQNV--RIVG 126
Query: 149 ADIDAAWNTLRTRYGISPENIILYGQSIG 177
A++ L++ + SP N+ + G S+G
Sbjct: 127 AEVAYLVGVLQSSFDYSPSNVHIIGHSLG 155
>1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A
{Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A
1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A
2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A
Length = 310
Score = 27.4 bits (61), Expect = 5.0
Identities = 28/170 (16%), Positives = 45/170 (26%), Gaps = 51/170 (30%)
Query: 87 SPNARFTILFSHGNAVDIGQMSSFFTGLGSRINCNIFSYDY---------SGY-----DY 132
+ +A L HG +SY Y SG D+
Sbjct: 43 NSDAEDVFLCLHGEPT--------------------WSYLYRKMIPVFAESGARVIAPDF 82
Query: 133 SGYGISTGRPSEK------NLYADIDAAWNTLRTRYGISPENIILYGQSIGTVPTIDLAS 186
G+G S +P ++ + A L NI L Q G + L
Sbjct: 83 FGFGKS-DKPVDEEDYTFEFHRNFLLALIERLDL------RNITLVVQDWGGFLGLTLPM 135
Query: 187 RY--QVGAVILHSPLMSGMRVAFPRTKRTW--FFDVFPRVIFANVKTPIM 232
+ +I+ + + V P D F + V +
Sbjct: 136 ADPSRFKRLIIMNAXLMTDPVTQPAFSAFVTQPADGFTAWKYDLVTPSDL 185
Score = 27.0 bits (60), Expect = 8.0
Identities = 17/108 (15%), Positives = 31/108 (28%), Gaps = 1/108 (0%)
Query: 177 GTVPTIDLASRYQVGAVILHSPLMSGMRVAFPRTKRTWFFDVFPRVIFANVKTPIMGLST 236
T + L + A L S FP T FP+++ + +ST
Sbjct: 180 VTPSDLRLDQFMKRWAPTLTEAEASAYAAPFPDTSYQAGVRKFPKMVAQR-DQAXIDIST 238
Query: 237 LENIDKVPKVTSPVLVIHGTEDEVIDLSHGIAIYERCPRPVEPLWVEG 284
+ G +D+++ + EPL +
Sbjct: 239 EAISFWQNDWNGQTFMAIGMKDKLLGPDVMYPMKALINGCPEPLEIAD 286
>3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase;
2.20A {Unidentified}
Length = 309
Score = 27.3 bits (61), Expect = 5.2
Identities = 7/45 (15%), Positives = 15/45 (33%)
Query: 218 VFPRVIFANVKTPIMGLSTLENIDKVPKVTSPVLVIHGTEDEVID 262
+PR + + L+N + + P L+ H +
Sbjct: 207 QWPREVPIGGEPAFAEAEVLKNGEWLMASPIPKLLFHAEPGALAP 251
>2ijd_1 Picornain 3C, RNA-directed RNA polymerase; RNA-dependent RNA
polymerase, picornavirus, protease, hydrolase,
transferase; 3.40A {Human poliovirus 1} SCOP: b.47.1.4
e.8.1.4
Length = 644
Score = 27.8 bits (61), Expect = 5.2
Identities = 10/36 (27%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 96 FSHGNAVDIGQMSSFFTGLGSRINCNIFSYDYSGYD 131
G+AV F++ + + +F++DY+GYD
Sbjct: 387 VITGSAVGCD-PDLFWSKIPVLMEEKLFAFDYTGYD 421
>1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation;
HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2
c.69.1.19 PDB: 2ppl_A
Length = 450
Score = 27.7 bits (61), Expect = 5.5
Identities = 15/89 (16%), Positives = 29/89 (32%), Gaps = 4/89 (4%)
Query: 91 RFTILFSHG--NAVDIGQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSEKNLY 148
+ T HG + + + + N D+ + Y + + +
Sbjct: 70 KKTRFIIHGFIDKGEENWLLDMCKNMFKVEEVNCICVDWKKGSQTSYTQAANNV--RVVG 127
Query: 149 ADIDAAWNTLRTRYGISPENIILYGQSIG 177
A + + L Y SP + L G S+G
Sbjct: 128 AQVAQMLSMLSANYSYSPSQVQLIGHSLG 156
>3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A,
alternative splicing, hydrolase, phosphoprotein, serine
esterase; 2.00A {Homo sapiens} PDB: 3c5w_P
Length = 316
Score = 27.5 bits (61), Expect = 5.9
Identities = 8/74 (10%), Positives = 17/74 (22%), Gaps = 5/74 (6%)
Query: 189 QVGAVILHSPLMSGMRVAFPRTKRTWFFDVFPRVIFANVKTPIMGLSTLENIDKVPKVTS 248
+V V + + + + GLS +
Sbjct: 190 RVSMVGQVKQCEGITSPEGSKKDHPYTWRIELAKTEKYWDGWFRGLS-----NLFLSCPI 244
Query: 249 PVLVIHGTEDEVID 262
P L++ D +
Sbjct: 245 PKLLLLAGVDRLDK 258
>3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus
subsp}
Length = 326
Score = 27.3 bits (61), Expect = 6.1
Identities = 10/58 (17%), Positives = 23/58 (39%), Gaps = 8/58 (13%)
Query: 148 YADIDAAWNTLRTRYGISPENIILYGQSIG------TVPTIDLASRYQVGAVILHSPL 199
+ I ++ L + G +N+++ G G V ++ + + L SP+
Sbjct: 147 FQAIQRVYDQLVSEVG--HQNVVVMGDGSGGALALSFVQSLLDNQQPLPNKLYLISPI 202
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET:
NAG BMA MAN; 1.67A {Botrytis aclada}
Length = 580
Score = 27.4 bits (61), Expect = 6.2
Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 4/28 (14%)
Query: 33 TYSFTPTESGSSTYHVQFNDKAEWQYGD 60
TY F T+ G++ YH F+ QYGD
Sbjct: 154 TYKFQVTQYGTTWYHSHFS----LQYGD 177
>1eu8_A Trehalose/maltose binding protein; protein-carbohydrate complex,
MBP 2 fold, ABC transporter fold, thermophilic protein;
HET: TRE; 1.90A {Thermococcus litoralis} SCOP: c.94.1.1
Length = 409
Score = 27.0 bits (60), Expect = 8.0
Identities = 13/71 (18%), Positives = 25/71 (35%), Gaps = 4/71 (5%)
Query: 152 DAAWNTLRTRYGISPENIILYGQSIGTVPTIDLASRYQVGAVILHSPLMSGMRVAFPRTK 211
AW ++ + S + ++G P Y AV+ SP + +R F
Sbjct: 306 ALAWEFVK--FVESYSVQKGFAMNLGWNPGR--VDVYDDPAVVSKSPHLKELRAVFENAV 361
Query: 212 RTWFFDVFPRV 222
+P++
Sbjct: 362 PRPIVPYYPQL 372
>1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET:
DDQ; 2.99A {Equus caballus}
Length = 452
Score = 26.9 bits (59), Expect = 8.3
Identities = 19/89 (21%), Positives = 31/89 (34%), Gaps = 4/89 (4%)
Query: 91 RFTILFSHGNAVDI--GQMSSFFTGLGSRINCNIFSYDYSGYDYSGYGISTGRPSEKNLY 148
R T HG S + N S D+S + Y + + + +
Sbjct: 70 RKTHFVIHGFRDRGEDSWPSDMCKKILQVETTNCISVDWSSGAKAEYTQA--VQNIRIVG 127
Query: 149 ADIDAAWNTLRTRYGISPENIILYGQSIG 177
A+ L T +PEN+ + G S+G
Sbjct: 128 AETAYLIQQLLTELSYNPENVHIIGHSLG 156
>3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A
{Streptomyces coelicolor} PDB: 3qmw_A*
Length = 280
Score = 26.5 bits (58), Expect = 9.3
Identities = 5/41 (12%), Positives = 8/41 (19%)
Query: 244 PKVTSPVLVIHGTEDEVIDLSHGIAIYERCPRPVEPLWVEG 284
P + P D + A + G
Sbjct: 218 PPLDCPTTAFSAAADPIATPEMVEAWRPYTTGSFLRRHLPG 258
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A
{Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB:
1aso_A* 1asp_A* 1asq_A*
Length = 552
Score = 26.9 bits (60), Expect = 9.8
Identities = 7/28 (25%), Positives = 9/28 (32%), Gaps = 4/28 (14%)
Query: 33 TYSFTPTESGSSTYHVQFNDKAEWQYGD 60
Y+FT G+ YH Q
Sbjct: 90 FYNFTVDNPGTFFYHGHLG----MQRSA 113
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.322 0.138 0.434
Gapped
Lambda K H
0.267 0.0518 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 4,491,737
Number of extensions: 264628
Number of successful extensions: 907
Number of sequences better than 10.0: 1
Number of HSP's gapped: 871
Number of HSP's successfully gapped: 153
Length of query: 286
Length of database: 6,701,793
Length adjustment: 93
Effective length of query: 193
Effective length of database: 4,105,140
Effective search space: 792292020
Effective search space used: 792292020
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.2 bits)