BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4395
(283 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 51/80 (63%), Gaps = 7/80 (8%)
Query: 191 AVENKENVEEYLKKMQTHYDAREAPNKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQI 250
A EN N EE L Q + ++ K +W + DFE+G PLG GKFG+VYLA+EK ++
Sbjct: 8 APEN--NPEEELASKQKNEES-----KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKF 60
Query: 251 MIALKVLYKVEIINERMTHQ 270
++ALKVL+K ++ + HQ
Sbjct: 61 ILALKVLFKAQLEKAGVEHQ 80
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 51/80 (63%), Gaps = 7/80 (8%)
Query: 191 AVENKENVEEYLKKMQTHYDAREAPNKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQI 250
A EN N EE L Q + ++ K +W + DFE+G PLG GKFG+VYLA+EK ++
Sbjct: 8 APEN--NPEEELASKQKNEES-----KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKF 60
Query: 251 MIALKVLYKVEIINERMTHQ 270
++ALKVL+K ++ + HQ
Sbjct: 61 ILALKVLFKAQLEKAGVEHQ 80
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 48/74 (64%), Gaps = 5/74 (6%)
Query: 197 NVEEYLKKMQTHYDAREAPNKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKV 256
N EE L Q + ++ K +W + DFE+G PLG GKFG+VYLA+EK ++ ++ALKV
Sbjct: 3 NPEEELASKQKNEES-----KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKV 57
Query: 257 LYKVEIINERMTHQ 270
L+K ++ + HQ
Sbjct: 58 LFKAQLEKAGVEHQ 71
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 41/57 (71%)
Query: 214 APNKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINERMTHQ 270
P S +W + DFE+G PLG GKFG+VYLA+EK ++ ++ALKVL+K ++ + HQ
Sbjct: 1 GPLGSRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ 57
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 41/55 (74%)
Query: 216 NKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINERMTHQ 270
+K +W + DFE+G PLG GKFG+VYLA+EK ++ ++ALKVL+K ++ + HQ
Sbjct: 5 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ 59
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 41/55 (74%)
Query: 216 NKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINERMTHQ 270
+K +W + DFE+G PLG GKFG+VYLA+EK ++ ++ALKVL+K ++ + HQ
Sbjct: 5 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ 59
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 41/55 (74%)
Query: 216 NKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINERMTHQ 270
+K +W + DFE+G PLG GKFG+VYLA+EK ++ ++ALKVL+K ++ + HQ
Sbjct: 2 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ 56
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 41/55 (74%)
Query: 216 NKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINERMTHQ 270
+K +W + DFE+G PLG GKFG+VYLA+EK ++ ++ALKVL+K ++ + HQ
Sbjct: 3 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ 57
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 41/55 (74%)
Query: 216 NKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINERMTHQ 270
+K +W + DFE+G PLG GKFG+VYLA+EK ++ ++ALKVL+K ++ + HQ
Sbjct: 5 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ 59
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 41/55 (74%)
Query: 216 NKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINERMTHQ 270
+K +W + DFE+G PLG GKFG+VYLA+EK ++ ++ALKVL+K ++ + HQ
Sbjct: 1 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ 55
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 41/55 (74%)
Query: 216 NKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINERMTHQ 270
+K +W + DFE+G PLG GKFG+VYLA+EK ++ ++ALKVL+K ++ + HQ
Sbjct: 5 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ 59
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 41/55 (74%)
Query: 216 NKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINERMTHQ 270
+K +W + DFE+G PLG GKFG+VYLA+EK ++ ++ALKVL+K ++ + HQ
Sbjct: 1 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ 55
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 41/55 (74%)
Query: 216 NKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINERMTHQ 270
+K +W + DFE+G PLG GKFG+VYLA+EK ++ ++ALKVL+K ++ + HQ
Sbjct: 2 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ 56
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 41/55 (74%)
Query: 216 NKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINERMTHQ 270
+K +W + DFE+G PLG GKFG+VYLA+EK ++ ++ALKVL+K ++ + HQ
Sbjct: 5 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ 59
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 41/55 (74%)
Query: 216 NKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINERMTHQ 270
+K +W + DFE+G PLG GKFG+VYLA+EK ++ ++ALKVL+K ++ + HQ
Sbjct: 3 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ 57
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 40/54 (74%)
Query: 217 KSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINERMTHQ 270
K +W + DFE+G PLG GKFG+VYLA+EK ++ ++ALKVL+K ++ + HQ
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ 55
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 41/55 (74%)
Query: 216 NKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINERMTHQ 270
+K +W + DFE+G PLG GKFG+VYLA+EK ++ ++ALKVL+K ++ + HQ
Sbjct: 3 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ 57
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 41/55 (74%)
Query: 216 NKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINERMTHQ 270
+K +W + DFE+G PLG GKFG+VYLA+EK ++ ++ALKVL+K ++ + HQ
Sbjct: 3 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ 57
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 40/53 (75%)
Query: 218 SYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINERMTHQ 270
S +W + DFE+G PLG GKFG+VYLA+EK ++ ++ALKVL+K ++ + HQ
Sbjct: 5 SRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ 57
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 40/54 (74%)
Query: 217 KSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINERMTHQ 270
K +W + DFE+G PLG GKFG+VYLA+EK ++ ++ALKVL+K ++ + HQ
Sbjct: 1 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ 54
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 39/51 (76%)
Query: 220 RWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINERMTHQ 270
+W + DFE+G PLG GKFG+VYLA+EK ++ ++ALKVL+K ++ + HQ
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQ 54
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 39/51 (76%)
Query: 220 RWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINERMTHQ 270
+W + DFE+G PLG GKFG+VYLA+EK ++ ++ALKVL+K ++ + HQ
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ 54
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 39/51 (76%)
Query: 220 RWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINERMTHQ 270
+W + DFE+G PLG GKFG+VYLA+EK ++ ++ALKVL+K ++ + HQ
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ 54
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 39/51 (76%)
Query: 220 RWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINERMTHQ 270
+W + DFE+G PLG GKFG+VYLA+EK ++ ++ALKVL+K ++ + HQ
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ 54
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 39/51 (76%)
Query: 220 RWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINERMTHQ 270
+W + DFE+G PLG GKFG+VYLA+EK ++ ++ALKVL+K ++ + HQ
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ 54
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 39/51 (76%)
Query: 220 RWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINERMTHQ 270
+W + DFE+G PLG GKFG+VYLA+EK ++ ++ALKVL+K ++ + HQ
Sbjct: 8 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ 58
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 39/51 (76%)
Query: 220 RWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINERMTHQ 270
+W + DFE+G PLG GKFG+VYLA+EK ++ ++ALKVL+K ++ + HQ
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ 54
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 39/51 (76%)
Query: 220 RWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINERMTHQ 270
+W + DFE+G PLG GKFG+VYLA+EK ++ ++ALKVL+K ++ + HQ
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ 54
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 39/51 (76%)
Query: 220 RWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINERMTHQ 270
+W + DFE+G PLG GKFG+VYLA+EK ++ ++ALKVL+K ++ + HQ
Sbjct: 3 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ 53
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 38/51 (74%)
Query: 220 RWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINERMTHQ 270
+W + DFE+G PLG GKFG+VYLA+EK + ++ALKVL+K ++ + HQ
Sbjct: 1 QWALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQ 51
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 38/50 (76%)
Query: 221 WQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINERMTHQ 270
+ + DFE+G PLG GKFG+VYLA+EK + ++ALKVL+K +I E + HQ
Sbjct: 20 FTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQ 69
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 39/51 (76%)
Query: 220 RWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINERMTHQ 270
+W + DF++G PLG GKFG+VYLA+E+ ++ ++ALKVL+K ++ + HQ
Sbjct: 8 QWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQ 58
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 39/51 (76%)
Query: 220 RWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINERMTHQ 270
+W + DF++G PLG GKFG+VYLA+E+ ++ ++ALKVL+K ++ + HQ
Sbjct: 8 QWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQ 58
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 42/58 (72%), Gaps = 2/58 (3%)
Query: 213 EAPNKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINERMTHQ 270
E P + ++ + DF++G PLG GKFG+VYLA+EK + ++ALKVL+K ++ E + HQ
Sbjct: 6 EMPKR--KFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQ 61
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 42/58 (72%), Gaps = 2/58 (3%)
Query: 213 EAPNKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINERMTHQ 270
E P + ++ + DF++G PLG GKFG+VYLA+EK + ++ALKVL+K ++ E + HQ
Sbjct: 5 EMPKR--KFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQ 60
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 41/58 (70%), Gaps = 2/58 (3%)
Query: 213 EAPNKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINERMTHQ 270
E P + ++ + DF++ PLG GKFG+VYLA+EK + ++ALKVL+K ++ E + HQ
Sbjct: 5 EMPKR--KFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQ 60
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 191 AVENKENVEEYLKKMQTHYDAREAPNKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQI 250
A+ +N++ +L + + + + R + D+EV +G G FG V L + K+T+
Sbjct: 45 ALRKNKNIDNFLSRYKDTINKI----RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRK 100
Query: 251 MIALKVLYKVEII 263
+ A+K+L K E+I
Sbjct: 101 VYAMKLLSKFEMI 113
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 191 AVENKENVEEYLKKMQTHYDAREAPNKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQI 250
A+ +N++ +L + + + + R + D+EV +G G FG V L + K+T+
Sbjct: 40 ALRKNKNIDNFLSRYKDTINKI----RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRK 95
Query: 251 MIALKVLYKVEII 263
+ A+K+L K E+I
Sbjct: 96 VYAMKLLSKFEMI 108
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 191 AVENKENVEEYLKKMQTHYDAREAPNKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQI 250
A+ +N++ +L + + + + R + D+EV +G G FG V L + K+T+
Sbjct: 45 ALRKNKNIDNFLSRYKDTINKI----RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRK 100
Query: 251 MIALKVLYKVEII 263
+ A+K+L K E+I
Sbjct: 101 VYAMKLLSKFEMI 113
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 212 REAPNKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYK 259
+E P+ + ++ DFE+ LG G FG V+LA+ K T A+K L K
Sbjct: 6 KERPSLQIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKK 53
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 210 DAREAPNKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINE 265
D ++ N R +++DF LG G FG V LA K T+ + A+K+L K +I +
Sbjct: 5 DRKQPSNNLDRVKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQD 60
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 177 AAPWGGSVKAVKVFAVENKENVEEYLKKMQTHYDAREAPNKSYRWQMSDFEVGCPLGTGK 236
AA G ++VK F + KE+ +LKK + A N ++ + FE LGTG
Sbjct: 5 AAKKGSEQESVKEFLAKAKED---FLKKWEN-----PAQNTAH---LDQFERIKTLGTGS 53
Query: 237 FGHVYLAKEKTTQIMIALKVLYKVEII 263
FG V L K K T A+K+L K +++
Sbjct: 54 FGRVMLVKHKETGNHFAMKILDKQKVV 80
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 177 AAPWGGSVKAVKVFAVENKENVEEYLKKMQTHYDAREAPNKSYRWQMSDFEVGCPLGTGK 236
AA G ++VK F + KE+ +LKK + A N ++ + FE LGTG
Sbjct: 5 AAKKGSEQESVKEFLAKAKED---FLKKWEN-----PAQNTAH---LDQFERIKTLGTGS 53
Query: 237 FGHVYLAKEKTTQIMIALKVLYKVEII 263
FG V L K K T A+K+L K +++
Sbjct: 54 FGRVMLVKHKETGNHFAMKILDKQKVV 80
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 50/117 (42%), Gaps = 32/117 (27%)
Query: 152 LMCLYFLQRQSSAWKSKFVRSLVSLAAPWGGSVKAVKVFAVENKENVEEYLKKMQTHYDA 211
L+CLY S+ + K+V + A P+ + +K+MQ H
Sbjct: 50 LVCLYTECSHSALRRDKYVAEFLEWAKPF------------------TQLVKEMQLH--- 88
Query: 212 REAPNKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINERMT 268
RE DFE+ +G G FG V + K K T+ + A+K+L K E++ T
Sbjct: 89 RE-----------DFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAET 134
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 177 AAPWGGSVKAVKVFAVENKENVEEYLKKMQTHYDAREAPNKSYRWQMSDFEVGCPLGTGK 236
AA G ++VK F + KE+ +LKK + A N ++ + FE LGTG
Sbjct: 5 AAKKGSEQESVKEFLAKAKED---FLKKWEN-----PAQNTAH---LDQFERIKTLGTGS 53
Query: 237 FGHVYLAKEKTTQIMIALKVLYKVEII 263
FG V L K K T A+K+L K +++
Sbjct: 54 FGRVMLVKHKETGNHFAMKILDKQKVV 80
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 177 AAPWGGSVKAVKVFAVENKENVEEYLKKMQTHYDAREAPNKSYRWQMSDFEVGCPLGTGK 236
AA G ++VK F + KE+ +LKK ++ A N ++ + FE LGTG
Sbjct: 6 AAKKGSEQESVKEFLAKAKED---FLKKWES-----PAQNTAH---LDQFERIKTLGTGS 54
Query: 237 FGHVYLAKEKTTQIMIALKVLYKVEII 263
FG V L K K T A+K+L K +++
Sbjct: 55 FGRVMLVKHKETGNHYAMKILDKQKVV 81
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 50/117 (42%), Gaps = 32/117 (27%)
Query: 152 LMCLYFLQRQSSAWKSKFVRSLVSLAAPWGGSVKAVKVFAVENKENVEEYLKKMQTHYDA 211
L+CLY S+ + K+V + A P+ + +K+MQ H
Sbjct: 34 LVCLYTECSHSALRRDKYVAEFLEWAKPF------------------TQLVKEMQLH--- 72
Query: 212 REAPNKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINERMT 268
RE DFE+ +G G FG V + K K T+ + A+K+L K E++ T
Sbjct: 73 RE-----------DFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAET 118
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Query: 177 AAPWGGSVKAVKVFAVENKENVEEYLKKMQTHYDAREAPNKSYRWQMSDFEVGCPLGTGK 236
AA G ++VK F + KE+ +LKK +T P+++ Q+ F+ LGTG
Sbjct: 5 AAKKGSEQESVKEFLAKAKED---FLKKWET-------PSQNTA-QLDQFDRIKTLGTGS 53
Query: 237 FGHVYLAKEKTTQIMIALKVLYKVEII 263
FG V L K K + A+K+L K +++
Sbjct: 54 FGRVMLVKHKESGNHYAMKILDKQKVV 80
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Query: 177 AAPWGGSVKAVKVFAVENKENVEEYLKKMQTHYDAREAPNKSYRWQMSDFEVGCPLGTGK 236
AA G ++VK F + KE+ +LKK +T P+++ Q+ F+ LGTG
Sbjct: 5 AAKKGSEQESVKEFLAKAKED---FLKKWET-------PSQNTA-QLDQFDRIKTLGTGS 53
Query: 237 FGHVYLAKEKTTQIMIALKVLYKVEII 263
FG V L K K + A+K+L K +++
Sbjct: 54 FGRVMLVKHKESGNHYAMKILDKQKVV 80
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Query: 177 AAPWGGSVKAVKVFAVENKENVEEYLKKMQTHYDAREAPNKSYRWQMSDFEVGCPLGTGK 236
AA G ++VK F + KE+ +LKK +T P+++ Q+ F+ LGTG
Sbjct: 6 AAKKGSEQESVKEFLAKAKED---FLKKWET-------PSQNTA-QLDQFDRIKTLGTGS 54
Query: 237 FGHVYLAKEKTTQIMIALKVLYKVEII 263
FG V L K K + A+K+L K +++
Sbjct: 55 FGRVMLVKHKESGNHYAMKILDKQKVV 81
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Query: 177 AAPWGGSVKAVKVFAVENKENVEEYLKKMQTHYDAREAPNKSYRWQMSDFEVGCPLGTGK 236
AA G ++VK F + KE+ +LKK +T P+++ Q+ F+ LGTG
Sbjct: 5 AAKKGSEQESVKEFLAKAKED---FLKKWET-------PSQNTA-QLDQFDRIKTLGTGS 53
Query: 237 FGHVYLAKEKTTQIMIALKVLYKVEII 263
FG V L K K + A+K+L K +++
Sbjct: 54 FGRVMLVKHKESGNHYAMKILDKQKVV 80
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Query: 177 AAPWGGSVKAVKVFAVENKENVEEYLKKMQTHYDAREAPNKSYRWQMSDFEVGCPLGTGK 236
AA G ++VK F + KE+ +LKK +T P+++ Q+ F+ LGTG
Sbjct: 5 AAKKGSEQESVKEFLAKAKED---FLKKWET-------PSQNTA-QLDQFDRIKTLGTGS 53
Query: 237 FGHVYLAKEKTTQIMIALKVLYKVEII 263
FG V L K K + A+K+L K +++
Sbjct: 54 FGRVMLVKHKESGNHYAMKILDKQKVV 80
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 11/92 (11%)
Query: 195 KENVEEYLKKMQTHYDAR-EAPNKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIA 253
+E+V+E+L K + + + E+P ++ + FE LGTG FG V L K K T A
Sbjct: 13 QESVKEFLAKAKEDFLKKWESPAQNTA-HLDQFERIRTLGTGSFGRVMLVKHKETGNHYA 71
Query: 254 LKVLYKVEII---------NERMTHQGMILAF 276
+K+L K +++ NE+ Q + F
Sbjct: 72 MKILDKQKVVKLKQIEHTLNEKRIQQAVNFPF 103
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 177 AAPWGGSVKAVKVFAVENKENVEEYLKKMQTHYDAREAPNKSYRWQMSDFEVGCPLGTGK 236
AA G ++VK F + KE+ +LKK ++ A N ++ + FE LGTG
Sbjct: 6 AAKKGSEQESVKEFLAKAKED---FLKKWES-----PAQNTAH---LDQFERIKTLGTGS 54
Query: 237 FGHVYLAKEKTTQIMIALKVLYKVEII 263
FG V L K K T A+K+L K +++
Sbjct: 55 FGRVMLVKHKETGNHYAMKILDKQKVV 81
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Query: 177 AAPWGGSVKAVKVFAVENKENVEEYLKKMQTHYDAREAPNKSYRWQMSDFEVGCPLGTGK 236
AA G ++VK F + KE+ +LKK +T P+++ Q+ F+ LGTG
Sbjct: 5 AAKKGSEQESVKEFLAKAKED---FLKKWET-------PSQNTA-QLDQFDRIKTLGTGS 53
Query: 237 FGHVYLAKEKTTQIMIALKVLYKVEII 263
FG V L K K + A+K+L K +++
Sbjct: 54 FGRVMLVKHKESGNHYAMKILDKQKVV 80
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Query: 177 AAPWGGSVKAVKVFAVENKENVEEYLKKMQTHYDAREAPNKSYRWQMSDFEVGCPLGTGK 236
AA G ++VK F + KE+ +LKK +T P+++ Q+ F+ LGTG
Sbjct: 5 AAKKGSEQESVKEFLAKAKED---FLKKWET-------PSQNTA-QLDQFDRIKTLGTGS 53
Query: 237 FGHVYLAKEKTTQIMIALKVLYKVEII 263
FG V L K K + A+K+L K +++
Sbjct: 54 FGRVMLVKHKESGNHYAMKILDKQKVV 80
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Query: 177 AAPWGGSVKAVKVFAVENKENVEEYLKKMQTHYDAREAPNKSYRWQMSDFEVGCPLGTGK 236
AA G ++VK F + KE+ +LKK +T P+++ Q+ F+ LGTG
Sbjct: 5 AAKKGSEQESVKEFLAKAKED---FLKKWET-------PSQNTA-QLDQFDRIKTLGTGS 53
Query: 237 FGHVYLAKEKTTQIMIALKVLYKVEII 263
FG V L K K + A+K+L K +++
Sbjct: 54 FGRVMLVKHKESGNHYAMKILDKQKVV 80
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Query: 177 AAPWGGSVKAVKVFAVENKENVEEYLKKMQTHYDAREAPNKSYRWQMSDFEVGCPLGTGK 236
AA G ++VK F + KE+ +LKK +T P+++ Q+ F+ LGTG
Sbjct: 5 AAKKGSEQESVKEFLAKAKED---FLKKWET-------PSQNTA-QLDQFDRIKTLGTGS 53
Query: 237 FGHVYLAKEKTTQIMIALKVLYKVEII 263
FG V L K K + A+K+L K +++
Sbjct: 54 FGRVMLVKHKESGNHYAMKILDKQKVV 80
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Query: 177 AAPWGGSVKAVKVFAVENKENVEEYLKKMQTHYDAREAPNKSYRWQMSDFEVGCPLGTGK 236
AA G ++VK F + KE+ +LKK +T P+++ Q+ F+ LGTG
Sbjct: 5 AAKKGSEQESVKEFLAKAKED---FLKKWET-------PSQNTA-QLDQFDRIKTLGTGS 53
Query: 237 FGHVYLAKEKTTQIMIALKVLYKVEII 263
FG V L K K + A+K+L K +++
Sbjct: 54 FGRVMLVKHKESGNHYAMKILDKQKVV 80
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 177 AAPWGGSVKAVKVFAVENKENVEEYLKKMQTHYDAREAPNKSYRWQMSDFEVGCPLGTGK 236
AA G ++VK F + KE+ +LKK ++ A N ++ + FE LGTG
Sbjct: 6 AAKKGSEQESVKEFLAKAKED---FLKKWES-----PAQNTAH---LDQFERIKTLGTGS 54
Query: 237 FGHVYLAKEKTTQIMIALKVLYKVEII 263
FG V L K K T A+K+L K +++
Sbjct: 55 FGRVMLVKHKETGNHYAMKILDKQKVV 81
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 177 AAPWGGSVKAVKVFAVENKENVEEYLKKMQTHYDAREAPNKSYRWQMSDFEVGCPLGTGK 236
AA G ++VK F + KE+ +LKK ++ A N ++ + FE LGTG
Sbjct: 26 AAKKGSEQESVKEFLAKAKED---FLKKWES-----PAQNTAH---LDQFERIKTLGTGS 74
Query: 237 FGHVYLAKEKTTQIMIALKVLYKVEII 263
FG V L K K T A+K+L K +++
Sbjct: 75 FGRVMLVKHKETGNHYAMKILDKQKVV 101
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Query: 177 AAPWGGSVKAVKVFAVENKENVEEYLKKMQTHYDAREAPNKSYRWQMSDFEVGCPLGTGK 236
AA G ++VK F + KE+ +LKK +T P+++ Q+ F+ LGTG
Sbjct: 26 AAKKGSEQESVKEFLAKAKED---FLKKWET-------PSQNTA-QLDQFDRIKTLGTGS 74
Query: 237 FGHVYLAKEKTTQIMIALKVLYKVEII 263
FG V L K K + A+K+L K +++
Sbjct: 75 FGRVMLVKHKESGNHYAMKILDKQKVV 101
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Query: 177 AAPWGGSVKAVKVFAVENKENVEEYLKKMQTHYDAREAPNKSYRWQMSDFEVGCPLGTGK 236
AA G ++VK F + KE+ +LKK +T P+++ Q+ F+ LGTG
Sbjct: 5 AAKKGSEQESVKEFLAKAKED---FLKKWET-------PSQNTA-QLDQFDRIKTLGTGS 53
Query: 237 FGHVYLAKEKTTQIMIALKVLYKVEII 263
FG V L K K + A+K+L K +++
Sbjct: 54 FGRVMLVKHKESGNHYAMKILDKQKVV 80
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Query: 177 AAPWGGSVKAVKVFAVENKENVEEYLKKMQTHYDAREAPNKSYRWQMSDFEVGCPLGTGK 236
AA G ++VK F + KE+ +LKK +T P+++ Q+ F+ LGTG
Sbjct: 26 AAKKGSEQESVKEFLAKAKED---FLKKWET-------PSQNTA-QLDQFDRIKTLGTGS 74
Query: 237 FGHVYLAKEKTTQIMIALKVLYKVEII 263
FG V L K K + A+K+L K +++
Sbjct: 75 FGRVMLVKHKESGNHYAMKILDKQKVV 101
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 194 NKENVEEYLKKMQTHYDAR-EAPNKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMI 252
N +V+E+L K + + + E+P ++ + FE LGTG FG V L K K T
Sbjct: 4 NSSDVKEFLAKAKEDFLKKWESPAQNTA-HLDQFERIKTLGTGSFGRVMLVKHKETGNHY 62
Query: 253 ALKVLYKVEII 263
A+K+L K +++
Sbjct: 63 AMKILDKQKVV 73
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 194 NKENVEEYLKKMQTHYDAR-EAPNKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMI 252
N +V+E+L K + + + E+P ++ + FE LGTG FG V L K K T
Sbjct: 4 NSSDVKEFLAKAKEDFLKKWESPAQNTA-HLDQFERIKTLGTGSFGRVMLVKHKETGNHY 62
Query: 253 ALKVLYKVEII 263
A+K+L K +++
Sbjct: 63 AMKILDKQKVV 73
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 195 KENVEEYLKKMQTHYDAR-EAPNKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIA 253
+E+V+E+L K + + + E+P ++ + FE LGTG FG V L K K T A
Sbjct: 13 QESVKEFLAKAKEDFLKKWESPAQNTA-HLDQFERIKTLGTGSFGRVMLVKHKETGNHYA 71
Query: 254 LKVLYKVEII 263
+K+L K +++
Sbjct: 72 MKILDKQKVV 81
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 195 KENVEEYLKKMQTHYDAR-EAPNKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIA 253
+E+V+E+L K + + + E P+++ Q+ F+ LGTG FG V L K K + A
Sbjct: 12 QESVKEFLAKAKEDFLKKWETPSQNTA-QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYA 70
Query: 254 LKVLYKVEII 263
+K+L K +++
Sbjct: 71 MKILDKQKVV 80
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 195 KENVEEYLKKMQTHYDAR-EAPNKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIA 253
+E+V+E+L K + + + E P+++ Q+ F+ LGTG FG V L K K + A
Sbjct: 12 QESVKEFLAKAKEDFLKKWETPSQNTA-QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYA 70
Query: 254 LKVLYKVEII 263
+K+L K +++
Sbjct: 71 MKILDKQKVV 80
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 195 KENVEEYLKKMQTHYDAR-EAPNKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIA 253
+E+V+E+L K + + + E P+++ Q+ F+ LGTG FG V L K K + A
Sbjct: 12 QESVKEFLAKAKEDFLKKWETPSQNTA-QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYA 70
Query: 254 LKVLYKVEII 263
+K+L K +++
Sbjct: 71 MKILDKQKVV 80
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 195 KENVEEYLKKMQTHYDAR-EAPNKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIA 253
+E+V+E+L K + + + E P+++ Q+ F+ LGTG FG V L K K + A
Sbjct: 12 QESVKEFLAKAKEDFLKKWETPSQNTA-QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYA 70
Query: 254 LKVLYKVEII 263
+K+L K +++
Sbjct: 71 MKILDKQKVV 80
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 195 KENVEEYLKKMQTHYDAR-EAPNKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIA 253
+E+V+E+L K + + + E P+++ Q+ F+ LGTG FG V L K K + A
Sbjct: 12 QESVKEFLAKAKEDFLKKWETPSQNTA-QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYA 70
Query: 254 LKVLYKVEII 263
+K+L K +++
Sbjct: 71 MKILDKQKVV 80
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 36.6 bits (83), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 195 KENVEEYLKKMQTHYDAR-EAPNKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIA 253
+E+V+E+L K + + + E P+++ Q+ F+ LGTG FG V L K K + A
Sbjct: 7 QESVKEFLAKAKEDFLKKWETPSQNTA-QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYA 65
Query: 254 LKVLYKVEII 263
+K+L K +++
Sbjct: 66 MKILDKQKVV 75
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 35.8 bits (81), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 29/53 (54%)
Query: 214 APNKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINER 266
P+ + + SDF +G G FG V LA+ K ++ A+KVL K I+ ++
Sbjct: 28 GPSSNPHAKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKK 80
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 35.8 bits (81), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 191 AVENKENVEEYLKKMQTHYDAREAPNKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQI 250
A+ +N++ +L + Y+ + + + D++V +G G FG V L + K +Q
Sbjct: 46 ALRKNKNIDNFLNR----YEKIVKKIRGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQK 101
Query: 251 MIALKVLYKVEII 263
+ A+K+L K E+I
Sbjct: 102 VYAMKLLSKFEMI 114
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 35.4 bits (80), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 37/82 (45%), Gaps = 15/82 (18%)
Query: 216 NKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINER-----MT-- 268
N S R + +FE LG G FG V LA+ K T + A+KVL K I+ + MT
Sbjct: 15 NSSNRLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEK 74
Query: 269 --------HQGMILAFTCYRNP 282
H + F C++ P
Sbjct: 75 RILSLARNHPFLTQLFCCFQTP 96
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 35.4 bits (80), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%)
Query: 215 PNKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINE 265
P + + + DF+ G LG G F V LA+E T A+K+L K II E
Sbjct: 1 PPQPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE 51
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 35.0 bits (79), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 212 REAPNKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYK 259
+E P+ + ++ DF + LG G FG V+LA+ K T A+K L K
Sbjct: 5 KERPSLQIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKK 52
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 34.7 bits (78), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 26/45 (57%)
Query: 219 YRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEII 263
+R M++FE LG G FG V L KEK T A+K+L K I+
Sbjct: 146 HRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIV 190
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 34.7 bits (78), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 26/45 (57%)
Query: 219 YRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEII 263
+R M++FE LG G FG V L KEK T A+K+L K I+
Sbjct: 143 HRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIV 187
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 34.7 bits (78), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 14/71 (19%)
Query: 225 DFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINE--------------RMTHQ 270
DF+ G LG G F V LA+E T A+K+L K II E R+ H
Sbjct: 38 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 97
Query: 271 GMILAFTCYRN 281
+ + C+++
Sbjct: 98 FFVKLYFCFQD 108
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 34.3 bits (77), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 197 NVEEYLKKMQTHYDAR-EAPNKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALK 255
+V+E+L K + + + E P+++ Q+ F+ LGTG FG V L K K + A+K
Sbjct: 1 SVKEFLAKAKEDFLKKWETPSQNTA-QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 59
Query: 256 VLYKVEII 263
+L K +++
Sbjct: 60 ILDKQKVV 67
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 34.3 bits (77), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 25/44 (56%)
Query: 220 RWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEII 263
R M++FE LG G FG V L KEK T A+K+L K I+
Sbjct: 4 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIV 47
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 34.3 bits (77), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%)
Query: 210 DAREAPNKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALK 255
+A A ++ R +M F+V G G FG V L KEK+T + +A+K
Sbjct: 9 NAAAAADERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIK 54
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 34.3 bits (77), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 25/44 (56%)
Query: 220 RWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEII 263
R M++FE LG G FG V L KEK T A+K+L K I+
Sbjct: 5 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIV 48
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 34.3 bits (77), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 25/44 (56%)
Query: 220 RWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEII 263
R M++FE LG G FG V L KEK T A+K+L K I+
Sbjct: 6 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIV 49
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 34.3 bits (77), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 177 AAPWGGSVKAVKVFAVENKENVEEYLKKMQTHYDAREAPNKSYRWQMSDFEVGCPLGTGK 236
AA G ++VK F + KE+ +LKK + A N ++ + FE LGTG
Sbjct: 6 AAKKGSEQESVKEFLAKAKED---FLKKWEN-----PAQNTAH---LDQFERIKTLGTGS 54
Query: 237 FGHVYLAKEKTTQIMIALKVLYKVEII 263
FG V L K T A+K+L K +++
Sbjct: 55 FGRVMLVKHMETGNHYAMKILDKQKVV 81
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 34.3 bits (77), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 177 AAPWGGSVKAVKVFAVENKENVEEYLKKMQTHYDAREAPNKSYRWQMSDFEVGCPLGTGK 236
AA G ++VK F + KE+ +LKK + A N ++ + FE LGTG
Sbjct: 5 AAKKGSEQESVKEFLAKAKED---FLKKWEN-----PAQNTAH---LDQFERIKTLGTGS 53
Query: 237 FGHVYLAKEKTTQIMIALKVLYKVEII 263
FG V L K T A+K+L K +++
Sbjct: 54 FGRVMLVKHMETGNHYAMKILDKQKVV 80
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 34.3 bits (77), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 177 AAPWGGSVKAVKVFAVENKENVEEYLKKMQTHYDAREAPNKSYRWQMSDFEVGCPLGTGK 236
AA G ++VK F + KE+ +LKK + A N ++ + FE LGTG
Sbjct: 5 AAKKGSEQESVKEFLAKAKED---FLKKWEN-----PAQNTAH---LDQFERIKTLGTGS 53
Query: 237 FGHVYLAKEKTTQIMIALKVLYKVEII 263
FG V L K T A+K+L K +++
Sbjct: 54 FGRVMLVKHMETGNHYAMKILDKQKVV 80
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 34.3 bits (77), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 177 AAPWGGSVKAVKVFAVENKENVEEYLKKMQTHYDAREAPNKSYRWQMSDFEVGCPLGTGK 236
AA G ++VK F + KE+ +LKK + A N ++ + FE LGTG
Sbjct: 6 AAKKGSEQESVKEFLAKAKED---FLKKWEN-----PAQNTAH---LDQFERIKTLGTGS 54
Query: 237 FGHVYLAKEKTTQIMIALKVLYKVEII 263
FG V L K T A+K+L K +++
Sbjct: 55 FGRVMLVKHMETGNHYAMKILDKQKVV 81
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 34.3 bits (77), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 177 AAPWGGSVKAVKVFAVENKENVEEYLKKMQTHYDAREAPNKSYRWQMSDFEVGCPLGTGK 236
AA G ++VK F + KE+ +LKK + A N ++ + FE LGTG
Sbjct: 6 AAKKGSEQESVKEFLAKAKED---FLKKWEN-----PAQNTAH---LDQFERIKTLGTGS 54
Query: 237 FGHVYLAKEKTTQIMIALKVLYKVEII 263
FG V L K T A+K+L K +++
Sbjct: 55 FGRVMLVKHMETGNHYAMKILDKQKVV 81
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 34.3 bits (77), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 24/41 (58%)
Query: 223 MSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEII 263
M+DF+ LG G FG V L +EK T A+K+L K II
Sbjct: 7 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVII 47
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 34.3 bits (77), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 24/41 (58%)
Query: 223 MSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEII 263
M+DF+ LG G FG V L +EK T A+K+L K II
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVII 44
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 34.3 bits (77), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 177 AAPWGGSVKAVKVFAVENKENVEEYLKKMQTHYDAREAPNKSYRWQMSDFEVGCPLGTGK 236
AA G ++VK F + KE+ +LKK + A N ++ + FE LGTG
Sbjct: 5 AAKKGSEQESVKEFLAKAKED---FLKKWEN-----PAQNTAH---LDQFERIKTLGTGS 53
Query: 237 FGHVYLAKEKTTQIMIALKVLYKVEII 263
FG V L K T A+K+L K +++
Sbjct: 54 FGRVMLVKHMETGNHYAMKILDKQKVV 80
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 34.3 bits (77), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 177 AAPWGGSVKAVKVFAVENKENVEEYLKKMQTHYDAREAPNKSYRWQMSDFEVGCPLGTGK 236
AA G ++VK F + KE+ +LKK + A N ++ + FE LGTG
Sbjct: 5 AAKKGSEQESVKEFLAKAKED---FLKKWEN-----PAQNTAH---LDQFERIKTLGTGS 53
Query: 237 FGHVYLAKEKTTQIMIALKVLYKVEII 263
FG V L K T A+K+L K +++
Sbjct: 54 FGRVMLVKHMETGNHYAMKILDKQKVV 80
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 34.3 bits (77), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 24/41 (58%)
Query: 223 MSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEII 263
M+DF+ LG G FG V L +EK T A+K+L K II
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVII 44
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 34.3 bits (77), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 177 AAPWGGSVKAVKVFAVENKENVEEYLKKMQTHYDAREAPNKSYRWQMSDFEVGCPLGTGK 236
AA G ++VK F + KE+ +LKK + A N ++ + FE LGTG
Sbjct: 5 AAKKGSEQESVKEFLAKAKED---FLKKWEN-----PAQNTAH---LDQFERIKTLGTGS 53
Query: 237 FGHVYLAKEKTTQIMIALKVLYKVEII 263
FG V L K T A+K+L K +++
Sbjct: 54 FGRVMLVKHMETGNHYAMKILDKQKVV 80
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 34.3 bits (77), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 27/46 (58%)
Query: 220 RWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINE 265
R +++DF LG G FG V L++ K T + A+K+L K +I +
Sbjct: 16 RMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQD 61
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 34.3 bits (77), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 177 AAPWGGSVKAVKVFAVENKENVEEYLKKMQTHYDAREAPNKSYRWQMSDFEVGCPLGTGK 236
AA G ++VK F + KE+ +LKK + A N ++ + FE LGTG
Sbjct: 6 AAKKGSEQESVKEFLAKAKED---FLKKWEN-----PAQNTAH---LDQFERIKTLGTGS 54
Query: 237 FGHVYLAKEKTTQIMIALKVLYKVEII 263
FG V L K T A+K+L K +++
Sbjct: 55 FGRVMLVKHMETGNHYAMKILDKQKVV 81
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 34.3 bits (77), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 24/41 (58%)
Query: 223 MSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEII 263
M+DF+ LG G FG V L +EK T A+K+L K II
Sbjct: 9 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVII 49
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 34.3 bits (77), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 177 AAPWGGSVKAVKVFAVENKENVEEYLKKMQTHYDAREAPNKSYRWQMSDFEVGCPLGTGK 236
AA G ++VK F + KE+ +LKK + A N ++ + FE LGTG
Sbjct: 5 AAKKGSEQESVKEFLAKAKED---FLKKWEN-----PAQNTAH---LDQFERIKTLGTGS 53
Query: 237 FGHVYLAKEKTTQIMIALKVLYKVEII 263
FG V L K T A+K+L K +++
Sbjct: 54 FGRVMLVKHMETGNHYAMKILDKQKVV 80
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 34.3 bits (77), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 24/41 (58%)
Query: 223 MSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEII 263
M+DF+ LG G FG V L +EK T A+K+L K II
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVII 44
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 33.9 bits (76), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 23/41 (56%)
Query: 225 DFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINE 265
DF+ G LG G F V LA+E T A+K+L K II E
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE 73
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 33.9 bits (76), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 24/41 (58%)
Query: 223 MSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEII 263
M+DF+ LG G FG V L +EK T A+K+L K II
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVII 44
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 33.9 bits (76), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 23/41 (56%)
Query: 225 DFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINE 265
DF+ G LG G F V LA+E T A+K+L K II E
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE 71
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 33.9 bits (76), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 177 AAPWGGSVKAVKVFAVENKENVEEYLKKMQTHYDAREAPNKSYRWQMSDFEVGCPLGTGK 236
AA G ++VK F + KE+ +LKK + A N ++ + FE LGTG
Sbjct: 6 AAKKGSEQESVKEFLAKAKED---FLKKWEN-----PAQNTAH---LDQFERIKTLGTGS 54
Query: 237 FGHVYLAKEKTTQIMIALKVLYKVEII 263
FG V L K T A+K+L K +++
Sbjct: 55 FGRVMLVKHMETGNHYAMKILDKQKVV 81
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 33.9 bits (76), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 177 AAPWGGSVKAVKVFAVENKENVEEYLKKMQTHYDAREAPNKSYRWQMSDFEVGCPLGTGK 236
AA G ++VK F + KE+ +LKK + A N ++ + FE LGTG
Sbjct: 5 AAKKGSEQESVKEFLAKAKED---FLKKWEN-----PAQNTAH---LDQFERIKTLGTGS 53
Query: 237 FGHVYLAKEKTTQIMIALKVLYKVEII 263
FG V L K T A+K+L K +++
Sbjct: 54 FGRVMLVKHMETGNHYAMKILDKQKVV 80
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 33.9 bits (76), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 177 AAPWGGSVKAVKVFAVENKENVEEYLKKMQTHYDAREAPNKSYRWQMSDFEVGCPLGTGK 236
AA G ++VK F + KE+ +LKK + A N ++ + FE LGTG
Sbjct: 5 AAKKGSEQESVKEFLAKAKED---FLKKWEN-----PAQNTAH---LDQFERIKTLGTGS 53
Query: 237 FGHVYLAKEKTTQIMIALKVLYKVEII 263
FG V L K T A+K+L K +++
Sbjct: 54 FGRVMLVKHMETGNHYAMKILDKQKVV 80
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 33.9 bits (76), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 177 AAPWGGSVKAVKVFAVENKENVEEYLKKMQTHYDAREAPNKSYRWQMSDFEVGCPLGTGK 236
AA G ++VK F + KE+ +LKK + A N ++ + FE LGTG
Sbjct: 5 AAKKGSEQESVKEFLAKAKED---FLKKWEN-----PAQNTAH---LDQFERIKTLGTGS 53
Query: 237 FGHVYLAKEKTTQIMIALKVLYKVEII 263
FG V L K T A+K+L K +++
Sbjct: 54 FGRVMLVKHMETGNHYAMKILDKQKVV 80
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 33.9 bits (76), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 23/41 (56%)
Query: 225 DFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINE 265
DF+ G LG G F V LA+E T A+K+L K II E
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE 71
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 33.9 bits (76), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 23/41 (56%)
Query: 225 DFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINE 265
DF+ G LG G F V LA+E T A+K+L K II E
Sbjct: 8 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE 48
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 33.9 bits (76), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 23/41 (56%)
Query: 225 DFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINE 265
DF+ G LG G F V LA+E T A+K+L K II E
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE 71
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 33.9 bits (76), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 23/41 (56%)
Query: 225 DFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINE 265
DF+ G LG G F V LA+E T A+K+L K II E
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE 73
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 33.9 bits (76), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 23/41 (56%)
Query: 225 DFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINE 265
DF+ G LG G F V LA+E T A+K+L K II E
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE 73
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 33.9 bits (76), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 27/46 (58%)
Query: 220 RWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINE 265
R +++DF LG G FG V L++ K T + A+K+L K +I +
Sbjct: 337 RMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQD 382
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 33.9 bits (76), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 23/41 (56%)
Query: 225 DFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINE 265
DF+ G LG G F V LA+E T A+K+L K II E
Sbjct: 36 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE 76
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 33.9 bits (76), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 23/41 (56%)
Query: 225 DFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINE 265
DF+ G LG G F V LA+E T A+K+L K II E
Sbjct: 34 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE 74
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 33.9 bits (76), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 23/41 (56%)
Query: 225 DFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINE 265
DF+ G LG G F V LA+E T A+K+L K II E
Sbjct: 9 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE 49
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 33.9 bits (76), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 23/41 (56%)
Query: 225 DFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINE 265
DF+ G LG G F V LA+E T A+K+L K II E
Sbjct: 30 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE 70
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 33.9 bits (76), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 23/41 (56%)
Query: 225 DFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINE 265
DF+ G LG G F V LA+E T A+K+L K II E
Sbjct: 10 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE 50
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 33.9 bits (76), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 23/41 (56%)
Query: 225 DFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINE 265
DF+ G LG G F V LA+E T A+K+L K II E
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE 73
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 33.9 bits (76), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 24/41 (58%)
Query: 223 MSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEII 263
M+DF+ LG G FG V L +EK T A+K+L K II
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVII 44
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 33.9 bits (76), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 23/41 (56%)
Query: 225 DFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINE 265
DF+ G LG G F V LA+E T A+K+L K II E
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE 73
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 33.9 bits (76), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 23/41 (56%)
Query: 225 DFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINE 265
DF+ G LG G F V LA+E T A+K+L K II E
Sbjct: 34 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE 74
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 33.9 bits (76), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 23/41 (56%)
Query: 225 DFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINE 265
DF+ G LG G F V LA+E T A+K+L K II E
Sbjct: 30 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE 70
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 33.9 bits (76), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 23/41 (56%)
Query: 225 DFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINE 265
DF+ G LG G F V LA+E T A+K+L K II E
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE 73
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 33.9 bits (76), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 215 PNKSYRWQMSD-FEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKV 260
P WQ+ D +E+ +GTG +GHV A +K + ++A+K + +V
Sbjct: 43 PRPHSDWQIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRV 89
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 33.9 bits (76), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 23/41 (56%)
Query: 225 DFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINE 265
DF+ G LG G F V LA+E T A+K+L K II E
Sbjct: 15 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE 55
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 40/91 (43%), Gaps = 18/91 (19%)
Query: 211 AREAPNKSYRW--QMSD----FEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYK----- 259
ARE S W Q D FE LGTG F V LA+EK T + A+K + K
Sbjct: 3 ARENGESSSSWKKQAEDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKG 62
Query: 260 --VEIINE-----RMTHQGMILAFTCYRNPH 283
I NE ++ H+ ++ Y +P+
Sbjct: 63 KESSIENEIAVLRKIKHENIVALEDIYESPN 93
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 177 AAPWGGSVKAVKVFAVENKENVEEYLKKMQTHYDAREAPNKSYRWQMSDFEVGCPLGTGK 236
AA G ++VK F + KE+ +LKK + A N ++ + FE LGTG
Sbjct: 5 AAKKGXEQESVKEFLAKAKED---FLKKWEN-----PAQNTAH---LDQFERIKTLGTGS 53
Query: 237 FGHVYLAKEKTTQIMIALKVLYKVEII 263
FG V L K T A+K+L K +++
Sbjct: 54 FGRVMLVKHMETGNHYAMKILDKQKVV 80
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 177 AAPWGGSVKAVKVFAVENKENVEEYLKKMQTHYDAREAPNKSYRWQMSDFEVGCPLGTGK 236
AA G ++VK F + KE+ +LKK + A N ++ + FE LGTG
Sbjct: 5 AAKKGXEQESVKEFLAKAKED---FLKKWEN-----PAQNTAH---LDQFERIKTLGTGS 53
Query: 237 FGHVYLAKEKTTQIMIALKVLYKVEII 263
FG V L K T A+K+L K +++
Sbjct: 54 FGRVMLVKHMETGNHYAMKILDKQKVV 80
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 177 AAPWGGSVKAVKVFAVENKENVEEYLKKMQTHYDAREAPNKSYRWQMSDFEVGCPLGTGK 236
AA G ++VK F + KE+ +LKK + A N ++ + FE LGTG
Sbjct: 6 AAKKGXEQESVKEFLAKAKED---FLKKWEN-----PAQNTAH---LDQFERIKTLGTGS 54
Query: 237 FGHVYLAKEKTTQIMIALKVLYKVEII 263
FG V L K T A+K+L K +++
Sbjct: 55 FGRVMLVKHMETGNHYAMKILDKQKVV 81
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 26/52 (50%)
Query: 217 KSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINERMT 268
K R DFE+ +G G FG V + K K + A+K+L K E++ T
Sbjct: 67 KQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAET 118
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 33.1 bits (74), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 177 AAPWGGSVKAVKVFAVENKENVEEYLKKMQTHYDAREAPNKSYRWQMSDFEVGCPLGTGK 236
AA G ++VK F + KE+ +LKK + A N ++ + FE +GTG
Sbjct: 5 AAKKGSEQESVKEFLAKAKED---FLKKWEN-----PAQNTAH---LDQFERIKTIGTGS 53
Query: 237 FGHVYLAKEKTTQIMIALKVLYKVEII 263
FG V L K T A+K+L K +++
Sbjct: 54 FGRVMLVKHMETGNHYAMKILDKQKVV 80
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 33.1 bits (74), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 220 RWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEII 263
++ + DF++ LGTG FG V+L + + A+KVL K EI+
Sbjct: 2 KYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVL-KKEIV 44
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 33.1 bits (74), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 177 AAPWGGSVKAVKVFAVENKENVEEYLKKMQTHYDAREAPNKSYRWQMSDFEVGCPLGTGK 236
AA G ++VK F + KE+ +LKK + A N ++ + FE +GTG
Sbjct: 5 AAKKGSEQESVKEFLAKAKED---FLKKWEN-----PAQNTAH---LDQFERIKTIGTGS 53
Query: 237 FGHVYLAKEKTTQIMIALKVLYKVEII 263
FG V L K T A+K+L K +++
Sbjct: 54 FGRVMLVKHMETGNHYAMKILDKQKVV 80
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 32.7 bits (73), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 177 AAPWGGSVKAVKVFAVENKENVEEYLKKMQTHYDAREAPNKSYRWQMSDFEVGCPLGTGK 236
AA G ++VK F + KE+ +LKK + A N ++ + FE +GTG
Sbjct: 5 AAKKGXEQESVKEFLAKAKED---FLKKWEN-----PAQNTAH---LDQFERIKTIGTGS 53
Query: 237 FGHVYLAKEKTTQIMIALKVLYKVEII 263
FG V L K T A+K+L K +++
Sbjct: 54 FGRVMLVKHMETGNHYAMKILDKQKVV 80
>pdb|3D2B|A Chain A, Structure Of 2d9, A Thermostable Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
pdb|3D2B|B Chain B, Structure Of 2d9, A Thermostable Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
Length = 181
Score = 32.7 bits (73), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 42/103 (40%), Gaps = 6/103 (5%)
Query: 76 VTHPFVRVGSYFSYIAAALVGLGYQRDLSMRGAPYDFRKAPNENQEYFANFKALIEETYD 135
+ H S F+ I + LV G+ RD + DF N +++ D
Sbjct: 8 MVHGIGGASSNFAGIKSYLVSQGWSRD---KLYAVDFWDKTGTNYNNGPVLSRFVQKVLD 64
Query: 136 LNGGTPVVLVAHSMGSLMCLYFLQRQSSAWKSKFVRSLVSLAA 178
G V +VAHSMG LY+++ K V ++V+L
Sbjct: 65 ETGAKKVDIVAHSMGGANTLYYIKYLDGGNK---VANVVTLGG 104
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 29/52 (55%)
Query: 232 LGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINERMTHQGMILAFTCYRNPH 283
LGTG F V LA++K TQ ++A+K + K + + + + I ++P+
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPN 77
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 29/52 (55%)
Query: 232 LGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINERMTHQGMILAFTCYRNPH 283
LGTG F V LA++K TQ ++A+K + K + + + + I ++P+
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPN 77
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 29/52 (55%)
Query: 232 LGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINERMTHQGMILAFTCYRNPH 283
LGTG F V LA++K TQ ++A+K + K + + + + I ++P+
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPN 77
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 32.3 bits (72), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 29/52 (55%)
Query: 232 LGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINERMTHQGMILAFTCYRNPH 283
LGTG F V LA++K TQ ++A+K + K + + + + I ++P+
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPN 77
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 32.3 bits (72), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 22/41 (53%)
Query: 225 DFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINE 265
DF+ G LG G F LA+E T A+K+L K II E
Sbjct: 31 DFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKE 71
>pdb|2ZYR|A Chain A, A. Fulgidus Lipase With Fatty Acid Fragment And Magnesium
pdb|2ZYR|B Chain B, A. Fulgidus Lipase With Fatty Acid Fragment And Magnesium
Length = 484
Score = 32.3 bits (72), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 120 QEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSSAWKSKFVRSLVSLAAP 179
E F+ +I+E +G V LV HSMG+ + ++ SS ++ V L+ L
Sbjct: 108 DETFSRLDRVIDEALAESGADKVDLVGHSMGTFFLVRYV--NSSPERAAKVAHLILLDGV 165
Query: 180 WG 181
WG
Sbjct: 166 WG 167
>pdb|2ZYS|A Chain A, A. Fulgidus Lipase With Fatty Acid Fragment And Chloride
Length = 479
Score = 32.3 bits (72), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 120 QEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSSAWKSKFVRSLVSLAAP 179
E F+ +I+E +G V LV HSMG+ + ++ SS ++ V L+ L
Sbjct: 108 DETFSRLDRVIDEALAESGADKVDLVGHSMGTFFLVRYV--NSSPERAAKVAHLILLDGV 165
Query: 180 WG 181
WG
Sbjct: 166 WG 167
>pdb|2ZYI|A Chain A, A. Fulgidus Lipase With Fatty Acid Fragment And Calcium
pdb|2ZYI|B Chain B, A. Fulgidus Lipase With Fatty Acid Fragment And Calcium
Length = 475
Score = 32.3 bits (72), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 120 QEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSSAWKSKFVRSLVSLAAP 179
E F+ +I+E +G V LV HSMG+ + ++ SS ++ V L+ L
Sbjct: 108 DETFSRLDRVIDEALAESGADKVDLVGHSMGTFFLVRYV--NSSPERAAKVAHLILLDGV 165
Query: 180 WG 181
WG
Sbjct: 166 WG 167
>pdb|1T2N|A Chain A, Structure Of A Thermostable Triple Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
Length = 181
Score = 32.0 bits (71), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 6/92 (6%)
Query: 87 FSYIAAALVGLGYQRDLSMRGAPYDFRKAPNENQEYFANFKALIEETYDLNGGTPVVLVA 146
F+ I + LV G+ RD + DF N +++ D G V +VA
Sbjct: 19 FAGIKSYLVSQGWSRD---KLYAVDFWDKTGTNYNNGPVLSRFVQKVLDETGAKKVDIVA 75
Query: 147 HSMGSLMCLYFLQRQSSAWKSKFVRSLVSLAA 178
HSMG LY+++ K V ++V+L
Sbjct: 76 HSMGGANTLYYIKNLDGGNK---VANVVTLGG 104
>pdb|1T4M|A Chain A, Structure Of A Thermostable Double Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
Length = 181
Score = 32.0 bits (71), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 6/92 (6%)
Query: 87 FSYIAAALVGLGYQRDLSMRGAPYDFRKAPNENQEYFANFKALIEETYDLNGGTPVVLVA 146
F+ I + LV G+ RD + DF N +++ D G V +VA
Sbjct: 19 FAGIKSYLVSQGWSRD---KLYAVDFWDKTGTNYNNGPVLSRFVQKVLDETGAKKVDIVA 75
Query: 147 HSMGSLMCLYFLQRQSSAWKSKFVRSLVSLAA 178
HSMG LY+++ K V ++V+L
Sbjct: 76 HSMGGANTLYYIKNLDGGNK---VANVVTLGG 104
>pdb|3D2A|A Chain A, Structure Of 1-17a4, A Thermostable Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
Length = 181
Score = 32.0 bits (71), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 6/92 (6%)
Query: 87 FSYIAAALVGLGYQRDLSMRGAPYDFRKAPNENQEYFANFKALIEETYDLNGGTPVVLVA 146
F+ I + LV G+ RD + DF N +++ D G V +VA
Sbjct: 19 FAGIKSYLVSQGWSRD---KLYAVDFWDKTGTNYNNGPVLSRFVQKVLDETGAKKVDIVA 75
Query: 147 HSMGSLMCLYFLQRQSSAWKSKFVRSLVSLAA 178
HSMG LY+++ K V ++V+L
Sbjct: 76 HSMGGANTLYYIKNLDGGNK---VANVVTLGG 104
>pdb|2QXT|A Chain A, Crystal Structure Analysis Of The Bacillus Subtilis Lipase
Crystallized At Ph 4.5
pdb|2QXT|B Chain B, Crystal Structure Analysis Of The Bacillus Subtilis Lipase
Crystallized At Ph 4.5
pdb|2QXU|A Chain A, Crystal Structure Analysis Of The Bacillus Subtilis Lipase
Crystallized At Ph 5.0
pdb|2QXU|B Chain B, Crystal Structure Analysis Of The Bacillus Subtilis Lipase
Crystallized At Ph 5.0
pdb|2QXU|C Chain C, Crystal Structure Analysis Of The Bacillus Subtilis Lipase
Crystallized At Ph 5.0
pdb|2QXU|D Chain D, Crystal Structure Analysis Of The Bacillus Subtilis Lipase
Crystallized At Ph 5.0
pdb|2QXU|E Chain E, Crystal Structure Analysis Of The Bacillus Subtilis Lipase
Crystallized At Ph 5.0
pdb|2QXU|F Chain F, Crystal Structure Analysis Of The Bacillus Subtilis Lipase
Crystallized At Ph 5.0
pdb|2QXU|G Chain G, Crystal Structure Analysis Of The Bacillus Subtilis Lipase
Crystallized At Ph 5.0
pdb|2QXU|H Chain H, Crystal Structure Analysis Of The Bacillus Subtilis Lipase
Crystallized At Ph 5.0
Length = 179
Score = 32.0 bits (71), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 3/87 (3%)
Query: 87 FSYIAAALVGLGYQRDLSMRGAPYDFRKAPNENQEYFANFKALIEETYDLNGGTPVVLVA 146
F+ I + LV G+ RD + DF N +++ D G V +VA
Sbjct: 17 FAGIKSYLVSQGWSRD---KLYAVDFWDKTGTNYNNGPVLSRFVQKVLDETGAKKVDIVA 73
Query: 147 HSMGSLMCLYFLQRQSSAWKSKFVRSL 173
HSMG LY+++ K V +L
Sbjct: 74 HSMGGANTLYYIKNLDGGNKVANVVTL 100
>pdb|1I6W|A Chain A, The Crystal Structure Of Bacillus Subtilis Lipase: A
Minimal AlphaBETA HYDROLASE ENZYME
pdb|1I6W|B Chain B, The Crystal Structure Of Bacillus Subtilis Lipase: A
Minimal AlphaBETA HYDROLASE ENZYME
pdb|1ISP|A Chain A, Crystal Structure Of Bacillus Subtilis Lipase At 1.3a
Resolution
pdb|1R4Z|A Chain A, Bacillus Subtilis Lipase A With Covalently Bound Rc-Ipg-
Phosphonate-Inhibitor
pdb|1R4Z|B Chain B, Bacillus Subtilis Lipase A With Covalently Bound Rc-Ipg-
Phosphonate-Inhibitor
pdb|1R50|A Chain A, Bacillus Subtilis Lipase A With Covalently Bound Sc-Ipg-
Phosphonate-Inhibitor
pdb|1R50|B Chain B, Bacillus Subtilis Lipase A With Covalently Bound Sc-Ipg-
Phosphonate-Inhibitor
Length = 181
Score = 32.0 bits (71), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 3/87 (3%)
Query: 87 FSYIAAALVGLGYQRDLSMRGAPYDFRKAPNENQEYFANFKALIEETYDLNGGTPVVLVA 146
F+ I + LV G+ RD + DF N +++ D G V +VA
Sbjct: 19 FAGIKSYLVSQGWSRD---KLYAVDFWDKTGTNYNNGPVLSRFVQKVLDETGAKKVDIVA 75
Query: 147 HSMGSLMCLYFLQRQSSAWKSKFVRSL 173
HSMG LY+++ K V +L
Sbjct: 76 HSMGGANTLYYIKNLDGGNKVANVVTL 102
>pdb|3D2C|A Chain A, Structure Of 4d3, A Thermostable Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
pdb|3D2C|B Chain B, Structure Of 4d3, A Thermostable Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
pdb|3D2C|C Chain C, Structure Of 4d3, A Thermostable Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
pdb|3D2C|D Chain D, Structure Of 4d3, A Thermostable Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
pdb|3D2C|E Chain E, Structure Of 4d3, A Thermostable Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
pdb|3D2C|F Chain F, Structure Of 4d3, A Thermostable Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
pdb|3D2C|G Chain G, Structure Of 4d3, A Thermostable Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
pdb|3D2C|H Chain H, Structure Of 4d3, A Thermostable Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
pdb|3D2C|I Chain I, Structure Of 4d3, A Thermostable Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
pdb|3D2C|J Chain J, Structure Of 4d3, A Thermostable Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
pdb|3D2C|K Chain K, Structure Of 4d3, A Thermostable Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
pdb|3D2C|L Chain L, Structure Of 4d3, A Thermostable Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
Length = 181
Score = 31.6 bits (70), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 41/103 (39%), Gaps = 6/103 (5%)
Query: 76 VTHPFVRVGSYFSYIAAALVGLGYQRDLSMRGAPYDFRKAPNENQEYFANFKALIEETYD 135
+ H S F I + LV G+ RD + DF N +++ D
Sbjct: 8 MVHGIGGSSSNFEGIKSYLVSQGWSRD---KLYAVDFWDKTGTNYNNGPVLSRFVQKVLD 64
Query: 136 LNGGTPVVLVAHSMGSLMCLYFLQRQSSAWKSKFVRSLVSLAA 178
G V +VAHSMG LY+++ K V ++V+L
Sbjct: 65 ETGAKKVDIVAHSMGGANTLYYIKYLDGGNK---VANVVTLGG 104
>pdb|1YS1|X Chain X, Burkholderia Cepacia Lipase Complexed With Hexylphosphonic
Acid (R)-2-Methyl-3-Phenylpropyl Ester
pdb|1YS2|X Chain X, Burkholderia Cepacia Lipase Complexed With Hexylphosphonic
Acid (s) 2-methyl-3-phenylpropyl Ester
Length = 320
Score = 31.6 bits (70), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 37/95 (38%), Gaps = 18/95 (18%)
Query: 98 GYQRDLSMRGAP--------YDFRKAPN-ENQEYFANFKALIEETYDLNGGTPVVLVAHS 148
G Q DL RGA + PN ++ A K ++ T G T V LV HS
Sbjct: 32 GIQEDLQQRGATVYVANLSGFQSDDGPNGRGEQLLAYVKTVLAAT----GATKVNLVGHS 87
Query: 149 MGSLMCLYFLQRQSSAWKSKFVRSLVSLAAPWGGS 183
G L Y +A V S+ ++ P GS
Sbjct: 88 QGGLTSRYV-----AAVAPDLVASVTTIGTPHRGS 117
>pdb|1OIL|A Chain A, Structure Of Lipase
pdb|1OIL|B Chain B, Structure Of Lipase
pdb|4LIP|D Chain D, Pseudomonas Lipase Complexed With Rc-(rp, Sp)-
Dibutylcarbamoylglycero-3-o-butylphosphonate
pdb|4LIP|E Chain E, Pseudomonas Lipase Complexed With Rc-(rp, Sp)-
Dibutylcarbamoylglycero-3-o-butylphosphonate
pdb|1HQD|A Chain A, Pseudomonas Cepacia Lipase Complexed With Transition State
Analogue Of 1-Phenoxy-2-Acetoxy Butane
pdb|2LIP|A Chain A, Pseudomonas Lipase Open Conformation
pdb|3LIP|A Chain A, Open Conformation Of Pseudomonas Cepacia Lipase
pdb|5LIP|A Chain A, Pseudomonas Lipase Complexed With Rc-(Rp, Sp)-1,2-
Dioctylcarbamoylglycero-3-O-Octylphosphonate
pdb|2NW6|A Chain A, Burkholderia Cepacia Lipase Complexed With S-Inhibitor
Length = 320
Score = 31.6 bits (70), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 37/95 (38%), Gaps = 18/95 (18%)
Query: 98 GYQRDLSMRGAP--------YDFRKAPN-ENQEYFANFKALIEETYDLNGGTPVVLVAHS 148
G Q DL RGA + PN ++ A K ++ T G T V LV HS
Sbjct: 32 GIQEDLQQRGATVYVANLSGFQSDDGPNGRGEQLLAYVKTVLAAT----GATKVNLVGHS 87
Query: 149 MGSLMCLYFLQRQSSAWKSKFVRSLVSLAAPWGGS 183
G L Y +A V S+ ++ P GS
Sbjct: 88 QGGLTSRYV-----AAVAPDLVASVTTIGTPHRGS 117
>pdb|3QMM|A Chain A, Structure Of 6b, A Thermostable Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
pdb|3QMM|B Chain B, Structure Of 6b, A Thermostable Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
Length = 181
Score = 31.6 bits (70), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 41/103 (39%), Gaps = 6/103 (5%)
Query: 76 VTHPFVRVGSYFSYIAAALVGLGYQRDLSMRGAPYDFRKAPNENQEYFANFKALIEETYD 135
+ H S F I + LV G+ RD + DF N +++ D
Sbjct: 8 MVHGIGGSSSNFEGIKSYLVSQGWSRD---KLYAVDFWDKTGTNYNNGPVLSRFVQKVLD 64
Query: 136 LNGGTPVVLVAHSMGSLMCLYFLQRQSSAWKSKFVRSLVSLAA 178
G V +VAHSMG LY+++ K V ++V+L
Sbjct: 65 ETGAKKVDIVAHSMGGANTLYYIKYLDGGNK---VANVVTLGG 104
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 31.2 bits (69), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 222 QMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYK 259
++ DF+VG LG G F VY A+ T + +A+K++ K
Sbjct: 9 KIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDK 46
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 31.2 bits (69), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 6/62 (9%)
Query: 205 MQTHYDAREAPNKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIIN 264
M YD+ E P + ++S +E +G G FG V+ A+ + T +ALK KV + N
Sbjct: 1 MAKQYDSVECP---FCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALK---KVLMEN 54
Query: 265 ER 266
E+
Sbjct: 55 EK 56
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 31.2 bits (69), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Query: 223 MSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINERMTHQGMILAFT 277
M+DF V +G G FG VY ++ T M A+K L K I QG LA
Sbjct: 187 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRI----KMKQGETLALN 237
>pdb|2ZYH|A Chain A, Mutant A. Fulgidus Lipase S136a Complexed With Fatty Acid
Fragment
pdb|2ZYH|B Chain B, Mutant A. Fulgidus Lipase S136a Complexed With Fatty Acid
Fragment
Length = 475
Score = 31.2 bits (69), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 120 QEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSSAWKSKFVRSLVSLAAP 179
E F+ +I+E +G V LV H+MG+ + ++ SS ++ V L+ L
Sbjct: 108 DETFSRLDRVIDEALAESGADKVDLVGHAMGTFFLVRYV--NSSPERAAKVAHLILLDGV 165
Query: 180 WG 181
WG
Sbjct: 166 WG 167
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 31.2 bits (69), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Query: 223 MSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINERMTHQGMILAFT 277
M+DF V +G G FG VY ++ T M A+K L K I QG LA
Sbjct: 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRI----KMKQGETLALN 238
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 31.2 bits (69), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 216 NKSYRWQMSDF-EVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINERMTHQGMIL 274
+ S R +SDF EV LG G VY K+K TQ ALKVL K T G++L
Sbjct: 44 DGSNRDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLL 103
Query: 275 AFT 277
+
Sbjct: 104 RLS 106
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 31.2 bits (69), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 226 FEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINE 265
+ + C LG G FG V K++ TQ A+KV+ K N+
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK 63
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 31.2 bits (69), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 217 KSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIIN 264
K R Q DFE+ +G G F V + K K T + A+K++ K +++
Sbjct: 54 KEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLK 101
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 30.8 bits (68), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 22/40 (55%)
Query: 223 MSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI 262
M+DF V +G G FG VY ++ T M A+K L K I
Sbjct: 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRI 227
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 30.8 bits (68), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 22/40 (55%)
Query: 223 MSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI 262
M+DF V +G G FG VY ++ T M A+K L K I
Sbjct: 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRI 227
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 30.8 bits (68), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 226 FEVGCPLGTGKFGHVYLAKEKTTQIMIALKVL 257
+E+ LG G FG VY A+ K T ++ A KV+
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVI 70
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 30.8 bits (68), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 226 FEVGCPLGTGKFGHVYLAKEKTTQIMIALKVL 257
+E+ LG G FG VY A+ K T ++ A KV+
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVI 70
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 30.8 bits (68), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 226 FEVGCPLGTGKFGHVYLAKEKTTQIMIALKVL 257
+E+ LG G FG VY A+ K T ++ A KV+
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVI 70
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 30.8 bits (68), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 198 VEEYLKKMQTHYDAR-EAPNKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKV 256
V+E+L K + + + E P ++ + FE LGTG FG V L K T A+K+
Sbjct: 1 VKEFLAKAKEDFLKKWENPAQNTA-HLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKI 59
Query: 257 LYKVEII 263
L K +++
Sbjct: 60 LDKQKVV 66
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 30.8 bits (68), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 43/105 (40%), Gaps = 16/105 (15%)
Query: 155 LYFLQRQSSAWKSKFVRSLVSLAAPWGGSVKAVKVFAVENKEN----VEEYLKKMQTHYD 210
LYF + S + S SL SLA W ++ E ++N + E LK + Y+
Sbjct: 11 LYF--QGSGSVSSGQAHSLASLAKTWSSGSAKLQRLGPETEDNEGVLLTEKLKPVD--YE 66
Query: 211 AREAPNKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALK 255
RE W LG G FG V+ K+K T A+K
Sbjct: 67 YRE----EVHWMTHQPR----LGRGSFGEVHRMKDKQTGFQCAVK 103
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 30.8 bits (68), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 226 FEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINE 265
+ + C LG G FG V K++ TQ A+KV+ K N+
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK 63
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 30.8 bits (68), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 226 FEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINE 265
+ + C LG G FG V K++ TQ A+KV+ K N+
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK 63
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 30.4 bits (67), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
Query: 222 QMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINERMTHQGMILAFTCY-- 279
+ ++++ LG G FG V LA TT +ALK++ K + M QG I Y
Sbjct: 11 HIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDM--QGRIEREISYLR 68
Query: 280 --RNPH 283
R+PH
Sbjct: 69 LLRHPH 74
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
Query: 222 QMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINERMTHQGMILAFTCY-- 279
+ ++++ LG G FG V LA TT +ALK++ K + M QG I Y
Sbjct: 12 HIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDM--QGRIEREISYLR 69
Query: 280 --RNPH 283
R+PH
Sbjct: 70 LLRHPH 75
>pdb|2VTV|A Chain A, Phaz7 Depolymerase From Paucimonas Lemoignei
pdb|2VTV|B Chain B, Phaz7 Depolymerase From Paucimonas Lemoignei
pdb|2X5X|A Chain A, The Crystal Structure Of Phaz7 At Atomic (1.2 Angstrom)
Resolution Reveals Details Of The Active Site And
Suggests A Substrate Binding Mode
pdb|2X76|A Chain A, The Crystal Structure Of Phaz7 At Atomic (1.2 Angstrom)
Resolution Reveals Details Of The Active Site And
Suggests A Substrate Binding Mode
Length = 342
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 123 FANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSSAWKSKFVRSLVSLAA 178
+A K I++ G + V +VAHSMG M L LQ ++ W S VR ++LA
Sbjct: 111 YAIIKTFIDKVKAYTGKSQVDIVAHSMGVSMSLATLQYYNN-WTS--VRKFINLAG 163
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
Query: 222 QMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINERMTHQGMILAFTCY-- 279
+ ++++ LG G FG V LA TT +ALK++ K + M QG I Y
Sbjct: 2 HIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDM--QGRIEREISYLR 59
Query: 280 --RNPH 283
R+PH
Sbjct: 60 LLRHPH 65
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
Query: 222 QMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINERMTHQGMILAFTCY-- 279
+ ++++ LG G FG V LA TT +ALK++ K + M QG I Y
Sbjct: 6 HIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDM--QGRIEREISYLR 63
Query: 280 --RNPH 283
R+PH
Sbjct: 64 LLRHPH 69
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 214 APNKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI 262
AP K S ++VG LG+G FG VY + + +A+K + K I
Sbjct: 41 APGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI 89
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 214 APNKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI 262
AP K S ++VG LG+G FG VY + + +A+K + K I
Sbjct: 33 APGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI 81
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 214 APNKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI 262
AP K S ++VG LG+G FG VY + + +A+K + K I
Sbjct: 14 APGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI 62
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 214 APNKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI 262
AP K S ++VG LG+G FG VY + + +A+K + K I
Sbjct: 13 APGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI 61
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 214 APNKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI 262
AP K S ++VG LG+G FG VY + + +A+K + K I
Sbjct: 46 APGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI 94
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 214 APNKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI 262
AP K S ++VG LG+G FG VY + + +A+K + K I
Sbjct: 26 APGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI 74
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 214 APNKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI 262
AP K S ++VG LG+G FG VY + + +A+K + K I
Sbjct: 27 APGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI 75
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 214 APNKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI 262
AP K S ++VG LG+G FG VY + + +A+K + K I
Sbjct: 13 APGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI 61
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 214 APNKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI 262
AP K S ++VG LG+G FG VY + + +A+K + K I
Sbjct: 14 APGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI 62
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 214 APNKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI 262
AP K S ++VG LG+G FG VY + + +A+K + K I
Sbjct: 27 APGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI 75
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 214 APNKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI 262
AP K S ++VG LG+G FG VY + + +A+K + K I
Sbjct: 26 APGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI 74
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 214 APNKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI 262
AP K S ++VG LG+G FG VY + + +A+K + K I
Sbjct: 26 APGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI 74
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 214 APNKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI 262
AP K S ++VG LG+G FG VY + + +A+K + K I
Sbjct: 26 APGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI 74
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 214 APNKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI 262
AP K S ++VG LG+G FG VY + + +A+K + K I
Sbjct: 27 APGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI 75
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 214 APNKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI 262
AP K S ++VG LG+G FG VY + + +A+K + K I
Sbjct: 14 APGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI 62
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 214 APNKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI 262
AP K S ++VG LG+G FG VY + + +A+K + K I
Sbjct: 27 APGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI 75
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 210 DAREAPNKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINE 265
+ RE+ S + DF++ +G G + V L + K T + A+KV+ K E++N+
Sbjct: 6 NTRESGKASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKK-ELVND 60
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 214 APNKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI 262
AP K S ++VG LG+G FG VY + + +A+K + K I
Sbjct: 41 APGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI 89
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Query: 208 HYDAREAPNKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINER 266
YD+ E P + ++S +E +G G FG V+ A+ + T +ALK KV + NE+
Sbjct: 5 QYDSVECP---FCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALK---KVLMENEK 57
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 198 VEEYLKKMQTHYDAREAPNKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVL 257
+EE + M T RE+ S + DF++ +G G + V L + K T + A++V+
Sbjct: 30 IEEEKEAMNT----RESGKASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVV 85
Query: 258 YKVEIINE 265
K E++N+
Sbjct: 86 KK-ELVND 92
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Query: 208 HYDAREAPNKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINER 266
YD+ E P + ++S +E +G G FG V+ A+ + T +ALK KV + NE+
Sbjct: 5 QYDSVECP---FCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALK---KVLMENEK 57
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Query: 208 HYDAREAPNKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINER 266
YD+ E P + ++S +E +G G FG V+ A+ + T +ALK KV + NE+
Sbjct: 5 QYDSVECP---FCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALK---KVLMENEK 57
>pdb|3QZU|A Chain A, Crystal Structure Of Bacillus Subtilis Lipase A 7-Fold
Mutant; The Outcome Of Directed Evolution Towards
Thermostability
pdb|3QZU|B Chain B, Crystal Structure Of Bacillus Subtilis Lipase A 7-Fold
Mutant; The Outcome Of Directed Evolution Towards
Thermostability
Length = 181
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 36/88 (40%), Gaps = 5/88 (5%)
Query: 87 FSYIAAALVGLGY-QRDLSMRGAPYDFRKAPNENQEYFANFKALIEETYDLNGGTPVVLV 145
F+ I + LV G+ Q DL DF N +++ D G V +V
Sbjct: 19 FAGIKSYLVSQGWSQNDL----YAVDFWDKTGTNYNNGPVLSRFVQKVLDETGAKKVDIV 74
Query: 146 AHSMGSLMCLYFLQRQSSAWKSKFVRSL 173
AHSMG LY+++ K V +L
Sbjct: 75 AHSMGGANTLYYIKNLDGGNKVANVVTL 102
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%), Gaps = 5/45 (11%)
Query: 211 AREAPNKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALK 255
A + +++ R++ DF LG G+F VY A++K T ++A+K
Sbjct: 2 ALDVKSRAKRYEKLDF-----LGEGQFATVYKARDKNTNQIVAIK 41
>pdb|1TAH|B Chain B, The Crystal Structure Of Triacylglycerol Lipase From
Pseudomonas Glumae Reveals A Partially Redundant
Catalytic Aspartate
pdb|1TAH|A Chain A, The Crystal Structure Of Triacylglycerol Lipase From
Pseudomonas Glumae Reveals A Partially Redundant
Catalytic Aspartate
pdb|1TAH|C Chain C, The Crystal Structure Of Triacylglycerol Lipase From
Pseudomonas Glumae Reveals A Partially Redundant
Catalytic Aspartate
pdb|1TAH|D Chain D, The Crystal Structure Of Triacylglycerol Lipase From
Pseudomonas Glumae Reveals A Partially Redundant
Catalytic Aspartate
Length = 318
Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 35/94 (37%), Gaps = 16/94 (17%)
Query: 98 GYQRDLSMRGAP--------YDFRKAPNENQEYFANFKALIEETYDLNGGTPVVLVAHSM 149
G Q DL GA + PN E A +++ G T V L+ HS
Sbjct: 31 GIQSDLQSHGAKVYVANLSGFQSDDGPNGRGE---QLLAYVKQVLAATGATKVNLIGHSQ 87
Query: 150 GSLMCLYFLQRQSSAWKSKFVRSLVSLAAPWGGS 183
G L Y +A + V S+ ++ P GS
Sbjct: 88 GGLTSRYV-----AAVAPQLVASVTTIGTPHRGS 116
>pdb|2ES4|A Chain A, Crystal Structure Of The Burkholderia Glumae Lipase-
Specific Foldase In Complex With Its Cognate Lipase
pdb|2ES4|B Chain B, Crystal Structure Of The Burkholderia Glumae Lipase-
Specific Foldase In Complex With Its Cognate Lipase
pdb|1CVL|A Chain A, Crystal Structure Of Bacterial Lipase From Chromobacterium
Viscosum Atcc 6918
Length = 319
Score = 29.6 bits (65), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 35/94 (37%), Gaps = 16/94 (17%)
Query: 98 GYQRDLSMRGAP--------YDFRKAPNENQEYFANFKALIEETYDLNGGTPVVLVAHSM 149
G Q DL GA + PN E A +++ G T V L+ HS
Sbjct: 32 GIQSDLQSHGAKVYVANLSGFQSDDGPNGRGE---QLLAYVKQVLAATGATKVNLIGHSQ 88
Query: 150 GSLMCLYFLQRQSSAWKSKFVRSLVSLAAPWGGS 183
G L Y +A + V S+ ++ P GS
Sbjct: 89 GGLTSRYV-----AAVAPQLVASVTTIGTPHRGS 117
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 20/31 (64%)
Query: 232 LGTGKFGHVYLAKEKTTQIMIALKVLYKVEI 262
LG+G +G V L ++K T + A+K++ K +
Sbjct: 45 LGSGAYGEVLLCRDKVTHVERAIKIIRKTSV 75
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 19/32 (59%)
Query: 226 FEVGCPLGTGKFGHVYLAKEKTTQIMIALKVL 257
+E+ LG G FG VY AK K T + A KV+
Sbjct: 21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVI 52
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 40/104 (38%), Gaps = 14/104 (13%)
Query: 156 YFLQRQSSAWKSKFVRSLVSLAAPWGGSVKAVKVFAVENKEN----VEEYLKKMQTHYDA 211
Y + + S SL SLA W ++ E ++N + E LK + Y+
Sbjct: 12 YLVHALQGSVSSGQAHSLASLAKTWSSGSAKLQRLGPETEDNEGVLLTEKLKPVD--YEY 69
Query: 212 REAPNKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALK 255
RE W VG G FG V+ K+K T A+K
Sbjct: 70 RE----EVHWMTHQPRVG----RGSFGEVHRMKDKQTGFQCAVK 105
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 19/32 (59%)
Query: 226 FEVGCPLGTGKFGHVYLAKEKTTQIMIALKVL 257
+E+ LG G FG VY AK K T + A KV+
Sbjct: 13 WEIVGELGDGAFGKVYKAKNKETGALAAAKVI 44
>pdb|1QGE|D Chain D, New Crystal Form Of Pseudomonas Glumae (Formerly
Chromobacterium Viscosum Atcc 6918) Lipase
Length = 222
Score = 29.3 bits (64), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 35/94 (37%), Gaps = 16/94 (17%)
Query: 98 GYQRDLSMRGAP--------YDFRKAPNENQEYFANFKALIEETYDLNGGTPVVLVAHSM 149
G Q DL GA + PN E A +++ G T V L+ HS
Sbjct: 32 GIQSDLQSHGAKVYVANLSGFQSDDGPNGRGE---QLLAYVKQVLAATGATKVNLIGHSQ 88
Query: 150 GSLMCLYFLQRQSSAWKSKFVRSLVSLAAPWGGS 183
G L Y +A + V S+ ++ P GS
Sbjct: 89 GGLTSRYV-----AAVAPQLVASVTTIGTPHRGS 117
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 29.3 bits (64), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 39/98 (39%), Gaps = 14/98 (14%)
Query: 162 SSAWKSKFVRSLVSLAAPWGGSVKAVKVFAVENKEN----VEEYLKKMQTHYDAREAPNK 217
S + S SL SLA W ++ E ++N + E LK + Y+ RE
Sbjct: 2 SGSVSSGQAHSLASLAKTWSSGSAKLQRLGPETEDNEGVLLTEKLKPVD--YEYRE---- 55
Query: 218 SYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALK 255
W VG G FG V+ K+K T A+K
Sbjct: 56 EVHWMTHQPRVG----RGSFGEVHRMKDKQTGFQCAVK 89
>pdb|3MDJ|A Chain A, Er Aminopeptidase, Erap1, Bound To The Zinc Aminopeptidase
Inhibitor, Bestatin
pdb|3MDJ|B Chain B, Er Aminopeptidase, Erap1, Bound To The Zinc Aminopeptidase
Inhibitor, Bestatin
pdb|3MDJ|C Chain C, Er Aminopeptidase, Erap1, Bound To The Zinc Aminopeptidase
Inhibitor, Bestatin
Length = 921
Score = 28.9 bits (63), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 16/71 (22%)
Query: 24 SQVEARLNKTETV-HYICDKTTSN------WFTLWLNLELLVPEVIDCFIDNLRLVYNNV 76
S ++L+ T TV H + + N W LWLN + F + V +V
Sbjct: 303 SSASSKLDITMTVAHELAHQWFGNLVTMEWWNDLWLN---------EGFAKFMEFVSVSV 353
Query: 77 THPFVRVGSYF 87
THP ++VG YF
Sbjct: 354 THPELKVGDYF 364
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 28.9 bits (63), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 223 MSDFEVGCPLGTGKFGHVYLAKEKT---TQIMIALKVLYKVEIINERMT 268
+ +FE+ LGTG +G V+L ++ + T + A+KVL K I+ + T
Sbjct: 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKT 101
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 28.5 bits (62), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 220 RWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVL--YKVEIINERMTHQGMILAFT 277
R ++ + +G LG G FG V + K + T +A+K+L K+ ++ + I
Sbjct: 12 RVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLK 71
Query: 278 CYRNPH 283
+R+PH
Sbjct: 72 LFRHPH 77
>pdb|2YD0|A Chain A, Crystal Structure Of The Soluble Domain Of Human
Endoplasmic Reticulum Aminopeptidase 1 Erap1
Length = 897
Score = 28.5 bits (62), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 9/41 (21%)
Query: 47 WFTLWLNLELLVPEVIDCFIDNLRLVYNNVTHPFVRVGSYF 87
W LWLN + F + V +VTHP ++VG YF
Sbjct: 324 WNDLWLN---------EGFAKFMEFVSVSVTHPELKVGDYF 355
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 28.5 bits (62), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 232 LGTGKFGHVYLAKEKTTQIMIALKVLYKVEI 262
LG G FG V L K+K T A+KV+ K ++
Sbjct: 34 LGKGSFGEVILCKDKITGQECAVKVISKRQV 64
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 28.5 bits (62), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 232 LGTGKFGHVYLAKEKTTQIMIALKVLYKVEI 262
LG G FG V L K+K T A+KV+ K ++
Sbjct: 58 LGKGSFGEVILCKDKITGQECAVKVISKRQV 88
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 28.5 bits (62), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 226 FEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINERMTHQGMILAFTCYRNPH 283
+E+ +G+G FG L ++K + ++A+K + + E I+E + + I+ R+P+
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKRE--IINHRSLRHPN 76
>pdb|3QNF|A Chain A, Crystal Structure Of The Open State Of Human Endoplasmic
Reticulum Aminopeptidase 1 Erap1
pdb|3QNF|B Chain B, Crystal Structure Of The Open State Of Human Endoplasmic
Reticulum Aminopeptidase 1 Erap1
pdb|3QNF|C Chain C, Crystal Structure Of The Open State Of Human Endoplasmic
Reticulum Aminopeptidase 1 Erap1
Length = 954
Score = 28.5 bits (62), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 9/41 (21%)
Query: 47 WFTLWLNLELLVPEVIDCFIDNLRLVYNNVTHPFVRVGSYF 87
W LWLN + F + V +VTHP ++VG YF
Sbjct: 375 WNDLWLN---------EGFAKFMEFVSVSVTHPELKVGDYF 406
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 28.5 bits (62), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 232 LGTGKFGHVYLAKEKTTQIMIALKVLYKVEI 262
LG G FG V L K+K T A+KV+ K ++
Sbjct: 57 LGKGSFGEVILCKDKITGQECAVKVISKRQV 87
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 28.5 bits (62), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 18/24 (75%)
Query: 232 LGTGKFGHVYLAKEKTTQIMIALK 255
+G G +G+VYLA +K T+ +A+K
Sbjct: 34 IGRGSYGYVYLAYDKNTEKNVAIK 57
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 28.5 bits (62), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 226 FEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINERMTHQGMILAFTCYRNPH 283
+E+ +G+G FG L ++K + ++A+K + + E I+E + + I+ R+P+
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKRE--IINHRSLRHPN 76
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 28.5 bits (62), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 232 LGTGKFGHVYLAKEKTTQIMIALKVLYKVEI 262
LG G FG V L K+K T A+KV+ K ++
Sbjct: 34 LGKGSFGEVILCKDKITGQECAVKVISKRQV 64
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 28.5 bits (62), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 6/55 (10%)
Query: 226 FEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINERMTHQGMILAFTCYR 280
F +G +G+G FG +YL T +A+K + N + H ++ YR
Sbjct: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK------LENVKTKHPQLLYESKIYR 57
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 28.5 bits (62), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 226 FEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINERMTHQGMILAFTCYRNPH 283
+E+ +G+G FG L ++K + ++A+K + + E I+E + + I+ R+P+
Sbjct: 20 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKRE--IINHRSLRHPN 75
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 28.1 bits (61), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 11/41 (26%), Positives = 24/41 (58%)
Query: 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIIN 264
+++ +G LG G FG V+ T ++ +A+KV+ + ++
Sbjct: 31 AEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLG 71
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 28.1 bits (61), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 232 LGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINERMTHQGMILAFTCYRNPH 283
+G+G FG L ++K T+ ++A+K + + I+E + Q I+ R+P+
Sbjct: 28 IGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENV--QREIINHRSLRHPN 77
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 28.1 bits (61), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 36/102 (35%), Gaps = 10/102 (9%)
Query: 156 YFLQRQSSAWKSKFVRSLVSLAAPWG--GSVKAVKVFAVENKENVEEYLKKMQTHYDARE 213
Y + + S SL SLA W GS E+ E V K Y+ RE
Sbjct: 31 YLVHALQGSVSSGQAHSLTSLAKTWAARGSRSREPSPKTEDNEGVLLTEKLKPVDYEYRE 90
Query: 214 APNKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALK 255
W LG G FG V+ ++K T A+K
Sbjct: 91 ----EVHWATHQLR----LGRGSFGEVHRMEDKQTGFQCAVK 124
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 28.1 bits (61), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 41/112 (36%), Gaps = 12/112 (10%)
Query: 148 SMGSLMCL--YFLQRQSSAWKSKFVRSLVSLAAPWG--GSVKAVKVFAVENKENVEEYLK 203
+MGS + Y + + S SL SLA W GS E+ E V K
Sbjct: 2 AMGSKFSVEEYLVHALQGSVSSGQAHSLTSLAKTWAARGSRSREPSPKTEDNEGVLLTEK 61
Query: 204 KMQTHYDAREAPNKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALK 255
Y+ RE W LG G FG V+ ++K T A+K
Sbjct: 62 LKPVDYEYRE----EVHWATHQLR----LGRGSFGEVHRMEDKQTGFQCAVK 105
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 28.1 bits (61), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 232 LGTGKFGHVYLAKEKTTQIMIALKVLYKVEI 262
LG G FG V L K+K T A+KV+ K ++
Sbjct: 40 LGKGSFGEVILCKDKITGQECAVKVISKRQV 70
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 28.1 bits (61), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI 262
S ++VG LG+G FG VY + + +A+K + K I
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI 47
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 27.7 bits (60), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 232 LGTGKFGHVYLAKEKTTQIMIALKVLYK 259
LG+G F V+L K++ T + ALK + K
Sbjct: 17 LGSGAFSEVFLVKQRLTGKLFALKCIKK 44
>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1
Length = 361
Score = 27.7 bits (60), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 18/25 (72%)
Query: 225 DFEVGCPLGTGKFGHVYLAKEKTTQ 249
+++VG P+G G FG +YLA +++
Sbjct: 36 EWKVGLPIGQGGFGCIYLADMNSSE 60
>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1
pdb|2KUL|A Chain A, Solution Structure Of Human Vaccinia Related Kinase
1(Vrk1)
Length = 368
Score = 27.7 bits (60), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 18/25 (72%)
Query: 225 DFEVGCPLGTGKFGHVYLAKEKTTQ 249
+++VG P+G G FG +YLA +++
Sbjct: 36 EWKVGLPIGQGGFGCIYLADMNSSE 60
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 27.7 bits (60), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI 262
S ++VG LG+G FG VY + + +A+K + K I
Sbjct: 8 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI 46
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 27.7 bits (60), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI 262
S ++VG LG+G FG VY + + +A+K + K I
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI 47
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 27.7 bits (60), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI 262
S ++VG LG+G FG VY + + +A+K + K I
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI 47
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 27.7 bits (60), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 220 RWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVL 257
+W M +E+ +G G FG V A ++ Q +A+K++
Sbjct: 51 KW-MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKII 87
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 27.7 bits (60), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 220 RWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVL 257
+W M +E+ +G G FG V A ++ Q +A+K++
Sbjct: 32 KW-MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKII 68
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 27.7 bits (60), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI 262
S ++VG LG+G FG VY + + +A+K + K I
Sbjct: 8 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI 46
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 27.7 bits (60), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 220 RWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVL 257
+W M +E+ +G G FG V A ++ Q +A+K++
Sbjct: 51 KW-MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKII 87
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 27.7 bits (60), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI 262
S ++VG LG+G FG VY + + +A+K + K I
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI 42
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 27.7 bits (60), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI 262
S ++VG LG+G FG VY + + +A+K + K I
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI 42
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 27.7 bits (60), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI 262
S ++VG LG+G FG VY + + +A+K + K I
Sbjct: 7 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI 45
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 27.7 bits (60), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI 262
S ++VG LG+G FG VY + + +A+K + K I
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI 42
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 27.7 bits (60), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI 262
S ++VG LG+G FG VY + + +A+K + K I
Sbjct: 31 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI 69
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 27.7 bits (60), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 220 RWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVL--YKVEIINERMTHQGMILAFT 277
R ++ + +G LG G FG V + + + T +A+K+L K+ ++ + I
Sbjct: 7 RVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLK 66
Query: 278 CYRNPH 283
+R+PH
Sbjct: 67 LFRHPH 72
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 27.7 bits (60), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 220 RWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVL--YKVEIINERMTHQGMILAFT 277
R ++ + +G LG G FG V + + + T +A+K+L K+ ++ + I
Sbjct: 7 RVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLK 66
Query: 278 CYRNPH 283
+R+PH
Sbjct: 67 LFRHPH 72
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 27.7 bits (60), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALK 255
++E+ +G G +G+VYLA +K +A+K
Sbjct: 28 DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIK 59
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 27.7 bits (60), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 226 FEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINERMTHQGMILAFTCYRNPH 283
+E+ +G G FG L ++K ++A+K + + E I+E + + I+ R+P+
Sbjct: 21 YELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKRE--IINHRSLRHPN 76
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.135 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,605,926
Number of Sequences: 62578
Number of extensions: 348448
Number of successful extensions: 1278
Number of sequences better than 100.0: 257
Number of HSP's better than 100.0 without gapping: 228
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 1048
Number of HSP's gapped (non-prelim): 257
length of query: 283
length of database: 14,973,337
effective HSP length: 98
effective length of query: 185
effective length of database: 8,840,693
effective search space: 1635528205
effective search space used: 1635528205
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (24.3 bits)