Query psy4395
Match_columns 283
No_of_seqs 331 out of 3876
Neff 9.7
Searched_HMMs 46136
Date Sat Aug 17 00:26:39 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4395.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/4395hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2369|consensus 100.0 9.6E-31 2.1E-35 226.8 13.2 181 14-194 32-239 (473)
2 PLN02517 phosphatidylcholine-s 100.0 1.6E-30 3.4E-35 231.8 12.6 179 7-197 70-280 (642)
3 PLN02733 phosphatidylcholine-s 100.0 1.1E-28 2.4E-33 219.7 15.9 171 9-196 16-218 (440)
4 PF02450 LCAT: Lecithin:choles 99.9 9.7E-27 2.1E-31 206.5 12.8 152 47-199 1-179 (389)
5 COG2267 PldB Lysophospholipase 99.6 2E-15 4.3E-20 129.6 9.9 92 87-184 50-145 (298)
6 PRK10749 lysophospholipase L2; 99.6 4.2E-15 9.2E-20 130.0 10.3 88 87-179 70-165 (330)
7 PLN02385 hydrolase; alpha/beta 99.6 7.7E-15 1.7E-19 129.4 11.4 89 86-179 103-196 (349)
8 PHA02857 monoglyceride lipase; 99.6 1.5E-14 3.2E-19 123.3 11.6 90 86-180 40-132 (276)
9 PLN02965 Probable pheophorbida 99.6 9E-15 1.9E-19 123.3 9.8 85 87-179 19-106 (255)
10 KOG4409|consensus 99.6 8.8E-15 1.9E-19 123.5 9.2 84 89-178 108-193 (365)
11 PLN02298 hydrolase, alpha/beta 99.6 1.7E-14 3.6E-19 126.3 11.0 89 87-180 76-169 (330)
12 TIGR02240 PHA_depoly_arom poly 99.6 9.8E-15 2.1E-19 124.5 8.7 84 87-180 41-126 (276)
13 PLN02824 hydrolase, alpha/beta 99.6 1.3E-14 2.8E-19 124.8 9.4 85 87-180 45-137 (294)
14 PLN02211 methyl indole-3-aceta 99.6 2.3E-14 4.9E-19 122.1 10.4 84 87-178 34-120 (273)
15 PRK00870 haloalkane dehalogena 99.5 3.7E-14 8.1E-19 122.5 10.4 84 87-179 62-149 (302)
16 PRK03592 haloalkane dehalogena 99.5 2.3E-14 5E-19 123.4 8.8 84 87-179 43-127 (295)
17 PF07819 PGAP1: PGAP1-like pro 99.5 7.7E-14 1.7E-18 114.9 10.7 66 124-191 64-134 (225)
18 TIGR03101 hydr2_PEP hydrolase, 99.5 8.1E-14 1.8E-18 117.3 10.5 91 87-183 45-137 (266)
19 PRK11126 2-succinyl-6-hydroxy- 99.5 3.2E-14 7E-19 118.7 8.0 83 87-179 18-101 (242)
20 PRK10673 acyl-CoA esterase; Pr 99.5 6.5E-14 1.4E-18 117.7 8.8 82 87-178 32-114 (255)
21 PF12697 Abhydrolase_6: Alpha/ 99.5 6.3E-14 1.4E-18 114.3 7.2 85 87-181 14-102 (228)
22 PRK10349 carboxylesterase BioH 99.5 1.9E-13 4.2E-18 115.1 9.9 79 87-179 29-108 (256)
23 TIGR03695 menH_SHCHC 2-succiny 99.5 3.1E-13 6.8E-18 111.8 10.2 87 87-179 17-104 (251)
24 PLN02511 hydrolase 99.5 4.1E-13 8.8E-18 119.9 10.5 93 86-181 117-211 (388)
25 PLN02652 hydrolase; alpha/beta 99.5 4E-13 8.7E-18 119.8 10.3 90 87-179 152-244 (395)
26 PLN02679 hydrolase, alpha/beta 99.4 2.7E-13 6E-18 120.0 9.1 83 87-179 104-190 (360)
27 KOG1455|consensus 99.4 5.8E-13 1.2E-17 110.6 9.3 91 83-178 67-162 (313)
28 TIGR03343 biphenyl_bphD 2-hydr 99.4 6.2E-13 1.4E-17 113.4 9.9 83 89-180 51-136 (282)
29 PLN02578 hydrolase 99.4 4.3E-13 9.4E-18 118.5 9.0 83 87-179 102-186 (354)
30 TIGR01250 pro_imino_pep_2 prol 99.4 9.9E-13 2.1E-17 111.6 10.2 84 87-179 42-130 (288)
31 PRK10985 putative hydrolase; P 99.4 1.2E-12 2.6E-17 114.3 10.8 95 86-183 75-171 (324)
32 PLN03087 BODYGUARD 1 domain co 99.4 1.4E-12 2.9E-17 118.3 10.8 77 96-181 230-310 (481)
33 KOG1454|consensus 99.4 6.7E-13 1.4E-17 115.2 8.2 91 87-183 74-169 (326)
34 PLN03084 alpha/beta hydrolase 99.4 8.6E-13 1.9E-17 117.0 8.5 86 86-181 142-233 (383)
35 TIGR03056 bchO_mg_che_rel puta 99.4 1.1E-12 2.3E-17 111.4 8.8 84 87-180 44-130 (278)
36 PRK03204 haloalkane dehalogena 99.4 1.6E-12 3.6E-17 111.4 9.7 84 87-180 50-136 (286)
37 TIGR03611 RutD pyrimidine util 99.4 1.2E-12 2.6E-17 109.4 8.5 83 87-179 29-114 (257)
38 TIGR01607 PST-A Plasmodium sub 99.4 1E-12 2.3E-17 114.9 7.4 94 87-180 63-185 (332)
39 TIGR01738 bioH putative pimelo 99.4 1.4E-12 3E-17 107.9 7.7 78 87-178 20-98 (245)
40 COG1647 Esterase/lipase [Gener 99.4 4.2E-12 9.1E-17 100.7 9.7 88 87-182 31-120 (243)
41 PLN02894 hydrolase, alpha/beta 99.4 4.7E-12 1E-16 113.6 10.9 87 87-179 121-210 (402)
42 TIGR02427 protocat_pcaD 3-oxoa 99.4 2E-12 4.4E-17 107.2 8.0 83 87-179 29-113 (251)
43 TIGR01836 PHA_synth_III_C poly 99.4 2.5E-12 5.4E-17 113.5 8.6 87 88-181 84-172 (350)
44 PRK06489 hypothetical protein; 99.3 2.2E-12 4.8E-17 114.2 8.1 76 96-179 103-188 (360)
45 PF01674 Lipase_2: Lipase (cla 99.3 1.6E-12 3.5E-17 105.8 5.2 97 89-186 20-129 (219)
46 TIGR03100 hydr1_PEP hydrolase, 99.3 1.9E-11 4.2E-16 104.2 11.7 89 86-181 45-135 (274)
47 PRK08775 homoserine O-acetyltr 99.3 2.5E-12 5.4E-17 113.2 6.4 85 87-180 85-173 (343)
48 PLN02872 triacylglycerol lipas 99.3 1.5E-11 3.1E-16 109.5 9.4 87 89-179 98-196 (395)
49 TIGR01392 homoserO_Ac_trn homo 99.3 5.8E-12 1.3E-16 111.2 6.5 79 93-180 67-162 (351)
50 TIGR01249 pro_imino_pep_1 prol 99.3 1.3E-11 2.9E-16 106.8 8.6 75 96-179 51-129 (306)
51 PRK14875 acetoin dehydrogenase 99.2 3.5E-11 7.5E-16 106.8 8.7 84 87-180 147-232 (371)
52 PRK07581 hypothetical protein; 99.2 6.4E-11 1.4E-15 104.0 7.9 83 93-180 66-159 (339)
53 PF05057 DUF676: Putative seri 99.2 1.1E-10 2.3E-15 95.9 8.4 69 119-187 55-132 (217)
54 KOG2382|consensus 99.2 8.8E-11 1.9E-15 99.1 7.8 88 87-179 68-159 (315)
55 PRK13604 luxD acyl transferase 99.2 1.8E-10 3.9E-15 98.0 9.5 88 86-182 52-142 (307)
56 KOG2564|consensus 99.1 2.9E-10 6.2E-15 93.3 8.7 92 82-178 85-180 (343)
57 PF12695 Abhydrolase_5: Alpha/ 99.1 3.5E-10 7.5E-15 86.5 8.4 77 87-178 15-93 (145)
58 PRK11071 esterase YqiA; Provis 99.1 4.9E-10 1.1E-14 90.2 9.5 70 90-181 22-94 (190)
59 TIGR01838 PHA_synth_I poly(R)- 99.1 6.3E-10 1.4E-14 102.1 11.3 85 89-180 211-302 (532)
60 KOG0598|consensus 99.1 1.2E-10 2.6E-15 99.0 6.0 64 220-283 21-98 (357)
61 PRK00175 metX homoserine O-ace 99.1 3E-10 6.5E-15 101.3 8.7 79 93-180 86-182 (379)
62 KOG4178|consensus 99.1 6.9E-10 1.5E-14 93.7 9.7 86 87-181 60-149 (322)
63 PLN02980 2-oxoglutarate decarb 99.1 3E-10 6.5E-15 117.2 9.1 82 87-178 1387-1478(1655)
64 TIGR03230 lipo_lipase lipoprot 99.1 8.4E-10 1.8E-14 98.6 10.7 85 89-178 62-152 (442)
65 PRK05855 short chain dehydroge 99.1 4.9E-10 1.1E-14 105.3 9.4 87 87-180 41-131 (582)
66 cd00707 Pancreat_lipase_like P 99.1 3.8E-10 8.3E-15 96.0 7.8 86 89-179 56-146 (275)
67 PRK10566 esterase; Provisional 99.1 1.3E-09 2.8E-14 91.4 10.6 77 87-163 43-130 (249)
68 PF06028 DUF915: Alpha/beta hy 99.1 3.5E-10 7.5E-15 94.4 6.9 67 119-185 82-148 (255)
69 KOG0616|consensus 99.0 5.2E-10 1.1E-14 92.7 7.0 85 198-282 18-116 (355)
70 KOG1838|consensus 99.0 1.9E-09 4.2E-14 94.0 10.6 93 86-181 142-236 (409)
71 PRK05077 frsA fermentation/res 99.0 1.7E-09 3.6E-14 97.4 10.5 90 85-181 209-301 (414)
72 PF00561 Abhydrolase_1: alpha/ 99.0 5E-10 1.1E-14 92.0 6.0 75 100-179 3-78 (230)
73 KOG0605|consensus 99.0 5.9E-10 1.3E-14 99.0 6.7 65 219-283 136-214 (550)
74 TIGR03502 lipase_Pla1_cef extr 99.0 1.3E-09 2.8E-14 103.3 9.1 74 87-160 465-575 (792)
75 KOG0580|consensus 99.0 4.9E-10 1.1E-14 90.2 4.7 66 217-282 15-94 (281)
76 PLN00021 chlorophyllase 98.9 8.4E-09 1.8E-13 89.2 9.6 87 86-178 67-164 (313)
77 COG0429 Predicted hydrolase of 98.9 1.1E-08 2.3E-13 86.6 9.4 92 85-180 91-185 (345)
78 KOG3724|consensus 98.9 1.9E-09 4.2E-14 99.4 4.6 72 119-192 155-232 (973)
79 COG1075 LipA Predicted acetylt 98.9 1E-08 2.2E-13 89.7 8.8 64 120-186 107-170 (336)
80 PRK07868 acyl-CoA synthetase; 98.9 1.3E-08 2.8E-13 101.4 10.4 83 89-180 90-177 (994)
81 TIGR01840 esterase_phb esteras 98.8 2.7E-08 5.7E-13 81.5 10.1 85 92-181 37-131 (212)
82 KOG0694|consensus 98.8 4.1E-09 8.9E-14 96.2 5.5 65 219-283 363-442 (694)
83 TIGR01839 PHA_synth_II poly(R) 98.8 2.7E-08 5.9E-13 90.8 10.3 87 89-181 238-329 (560)
84 KOG0595|consensus 98.8 1E-08 2.2E-13 88.5 5.8 62 222-283 8-82 (429)
85 KOG0592|consensus 98.8 5.8E-09 1.3E-13 92.9 4.4 64 220-283 69-147 (604)
86 KOG0575|consensus 98.8 1.6E-08 3.5E-13 91.3 6.7 60 224-283 18-91 (592)
87 KOG0615|consensus 98.8 1.5E-08 3.2E-13 87.6 6.2 61 223-283 171-249 (475)
88 PF00975 Thioesterase: Thioest 98.7 3.5E-08 7.7E-13 81.5 8.1 89 87-181 16-105 (229)
89 COG0596 MhpC Predicted hydrola 98.7 6.9E-08 1.5E-12 79.7 9.4 72 99-180 51-123 (282)
90 KOG0585|consensus 98.7 1.9E-08 4.1E-13 88.4 5.8 65 219-283 92-181 (576)
91 PLN02442 S-formylglutathione h 98.7 1.7E-07 3.6E-12 80.3 10.6 54 122-180 125-178 (283)
92 KOG2624|consensus 98.7 6.6E-08 1.4E-12 85.5 7.4 90 89-180 97-199 (403)
93 PRK11460 putative hydrolase; P 98.6 1.7E-07 3.8E-12 77.8 9.4 52 123-179 84-137 (232)
94 PF06821 Ser_hydrolase: Serine 98.6 4.1E-08 9E-13 77.4 5.3 54 118-181 38-92 (171)
95 TIGR02821 fghA_ester_D S-formy 98.6 1.4E-07 3.1E-12 80.4 8.6 36 139-179 137-172 (275)
96 PF10230 DUF2305: Uncharacteri 98.6 3E-07 6.5E-12 77.9 9.7 92 86-179 17-121 (266)
97 TIGR00976 /NonD putative hydro 98.6 1.1E-07 2.4E-12 88.9 7.5 84 90-179 45-131 (550)
98 COG3545 Predicted esterase of 98.6 1.3E-07 2.8E-12 72.9 5.8 56 119-184 43-98 (181)
99 KOG0610|consensus 98.5 8.8E-08 1.9E-12 83.0 4.2 66 218-283 71-150 (459)
100 KOG0690|consensus 98.5 1.8E-08 3.8E-13 84.9 -0.3 66 218-283 162-241 (516)
101 PF06342 DUF1057: Alpha/beta h 98.5 9.5E-07 2.1E-11 73.5 9.8 83 87-179 51-136 (297)
102 KOG0695|consensus 98.5 5.8E-08 1.3E-12 82.1 2.4 70 213-282 239-323 (593)
103 PF08538 DUF1749: Protein of u 98.5 8.4E-07 1.8E-11 75.1 8.6 94 84-179 49-147 (303)
104 PRK06765 homoserine O-acetyltr 98.5 4.6E-07 1E-11 80.8 7.2 54 118-180 142-196 (389)
105 COG4814 Uncharacterized protei 98.4 7.1E-07 1.5E-11 72.7 7.5 63 119-181 115-177 (288)
106 KOG4667|consensus 98.4 1.1E-06 2.3E-11 70.0 8.1 89 85-180 49-139 (269)
107 KOG0611|consensus 98.4 5.4E-08 1.2E-12 84.2 -0.3 60 224-283 53-126 (668)
108 PLN02606 palmitoyl-protein thi 98.4 2.7E-06 5.9E-11 71.9 9.7 56 122-183 79-135 (306)
109 PF00326 Peptidase_S9: Prolyl 98.4 2.5E-07 5.4E-12 75.7 3.3 88 87-179 3-98 (213)
110 KOG0597|consensus 98.4 1E-07 2.2E-12 85.8 0.9 60 223-282 1-73 (808)
111 PF05990 DUF900: Alpha/beta hy 98.3 1.2E-06 2.5E-11 72.8 6.7 61 119-179 72-136 (233)
112 PTZ00263 protein kinase A cata 98.3 1.9E-06 4E-11 75.4 8.3 66 218-283 12-91 (329)
113 KOG0600|consensus 98.3 3.7E-07 8E-12 81.0 2.8 61 222-282 115-188 (560)
114 KOG1035|consensus 98.3 2.1E-07 4.5E-12 90.2 0.9 58 223-280 478-547 (1351)
115 cd05626 STKc_LATS2 Catalytic d 98.3 2.7E-06 5.9E-11 76.0 7.9 59 225-283 2-74 (381)
116 KOG0581|consensus 98.3 1.6E-06 3.5E-11 74.2 5.9 62 221-282 76-149 (364)
117 KOG0659|consensus 98.3 3.5E-07 7.6E-12 75.1 1.6 59 224-282 2-73 (318)
118 KOG0032|consensus 98.2 2.3E-06 4.9E-11 76.1 6.7 60 224-283 35-109 (382)
119 COG3319 Thioesterase domains o 98.2 8.3E-06 1.8E-10 68.1 9.5 88 87-181 16-104 (257)
120 cd05599 STKc_NDR_like Catalyti 98.2 3.7E-06 8.1E-11 74.5 7.9 60 224-283 1-74 (364)
121 KOG2029|consensus 98.2 2E-06 4.2E-11 77.8 6.0 86 101-186 482-578 (697)
122 cd05629 STKc_NDR_like_fungal C 98.2 4.4E-06 9.5E-11 74.5 8.1 59 225-283 2-74 (377)
123 PHA03212 serine/threonine kina 98.2 3.7E-06 7.9E-11 75.5 7.4 61 222-282 90-155 (391)
124 cd05628 STKc_NDR1 Catalytic do 98.2 4.9E-06 1.1E-10 73.8 7.9 59 224-282 1-73 (363)
125 COG2945 Predicted hydrolase of 98.2 4.6E-06 1E-10 65.3 6.7 88 87-181 49-138 (210)
126 cd05598 STKc_LATS Catalytic do 98.2 5.5E-06 1.2E-10 73.8 8.1 59 224-282 1-73 (376)
127 PF12146 Hydrolase_4: Putative 98.2 2.1E-06 4.6E-11 58.5 4.1 48 84-131 29-79 (79)
128 KOG2541|consensus 98.2 1E-05 2.2E-10 66.6 8.6 39 141-183 93-131 (296)
129 PF06057 VirJ: Bacterial virul 98.2 6.2E-06 1.3E-10 65.1 7.2 91 86-181 17-108 (192)
130 cd05625 STKc_LATS1 Catalytic d 98.2 5.8E-06 1.3E-10 73.8 8.0 58 225-282 2-73 (382)
131 PF02089 Palm_thioest: Palmito 98.2 1.4E-06 3E-11 73.1 3.6 39 141-183 81-119 (279)
132 KOG0593|consensus 98.2 3E-07 6.6E-12 76.9 -0.3 58 224-281 2-72 (396)
133 COG4757 Predicted alpha/beta h 98.2 3E-06 6.4E-11 68.3 4.9 76 82-157 41-122 (281)
134 KOG0591|consensus 98.1 1.2E-07 2.7E-12 78.4 -3.1 62 220-281 15-90 (375)
135 KOG0586|consensus 98.1 3.7E-06 8.1E-11 76.3 5.9 61 222-282 54-127 (596)
136 KOG4236|consensus 98.1 2.4E-06 5.2E-11 76.6 4.4 55 229-283 569-636 (888)
137 cd05597 STKc_DMPK_like Catalyt 98.1 8.3E-06 1.8E-10 71.4 7.8 60 224-283 1-74 (331)
138 PF05728 UPF0227: Uncharacteri 98.1 1.1E-05 2.4E-10 64.4 7.6 45 128-180 47-91 (187)
139 COG3208 GrsT Predicted thioest 98.1 3.2E-06 7E-11 68.9 4.4 92 81-178 17-110 (244)
140 KOG0661|consensus 98.1 2.8E-07 6.1E-12 81.2 -2.0 62 222-283 8-82 (538)
141 cd05596 STKc_ROCK Catalytic do 98.1 8.7E-06 1.9E-10 72.4 7.4 63 221-283 40-116 (370)
142 cd07871 STKc_PCTAIRE3 Catalyti 98.1 1.3E-05 2.9E-10 68.5 8.2 60 223-282 4-75 (288)
143 KOG1152|consensus 98.1 3.6E-06 7.9E-11 76.1 4.7 62 222-283 559-642 (772)
144 COG3571 Predicted hydrolase of 98.1 3.4E-05 7.4E-10 58.7 9.2 91 86-181 31-125 (213)
145 KOG0663|consensus 98.1 2.9E-06 6.3E-11 72.0 3.6 59 222-280 74-145 (419)
146 KOG0986|consensus 98.1 1.4E-06 3E-11 76.6 1.6 65 219-283 180-258 (591)
147 cd05627 STKc_NDR2 Catalytic do 98.1 1.4E-05 3.1E-10 70.7 8.2 59 224-282 1-73 (360)
148 cd05600 STKc_Sid2p_Dbf2p Catal 98.1 1.5E-05 3.2E-10 69.8 7.9 58 225-282 2-73 (333)
149 cd05621 STKc_ROCK2 Catalytic d 98.1 1.3E-05 2.8E-10 71.3 7.6 62 222-283 41-116 (370)
150 cd07869 STKc_PFTAIRE1 Catalyti 98.1 1.6E-05 3.5E-10 68.5 8.0 61 223-283 4-76 (303)
151 KOG0658|consensus 98.0 1.1E-05 2.4E-10 69.1 6.6 59 224-282 24-89 (364)
152 cd05624 STKc_MRCK_beta Catalyt 98.0 1.9E-05 4E-10 69.2 8.3 60 224-283 1-74 (331)
153 cd05622 STKc_ROCK1 Catalytic d 98.0 1.5E-05 3.3E-10 70.9 7.8 62 221-282 40-115 (371)
154 PLN02633 palmitoyl protein thi 98.0 3.8E-05 8.2E-10 65.2 9.6 56 122-183 78-134 (314)
155 PTZ00426 cAMP-dependent protei 98.0 1.9E-05 4.1E-10 69.5 8.1 65 218-282 24-103 (340)
156 KOG0582|consensus 98.0 1.8E-05 3.8E-10 69.7 7.6 64 220-283 22-97 (516)
157 cd05612 STKc_PRKX_like Catalyt 98.0 7.7E-06 1.7E-10 70.2 4.9 58 225-282 2-73 (291)
158 PF12740 Chlorophyllase2: Chlo 98.0 5.6E-05 1.2E-09 62.9 9.6 87 87-179 33-130 (259)
159 KOG0583|consensus 98.0 2.1E-05 4.6E-10 69.8 7.5 62 222-283 15-93 (370)
160 KOG1552|consensus 98.0 1.7E-05 3.8E-10 65.2 6.1 72 98-178 88-161 (258)
161 PRK10252 entF enterobactin syn 98.0 2.2E-05 4.8E-10 80.8 8.5 83 86-178 1083-1169(1296)
162 cd00741 Lipase Lipase. Lipase 98.0 1.8E-05 3.9E-10 61.2 5.9 64 121-185 9-72 (153)
163 KOG0612|consensus 98.0 6.3E-07 1.4E-11 86.4 -2.7 63 221-283 72-148 (1317)
164 cd05573 STKc_ROCK_NDR_like Cat 98.0 1.6E-05 3.4E-10 70.0 6.2 58 225-282 2-73 (350)
165 COG3243 PhaC Poly(3-hydroxyalk 98.0 4.5E-05 9.8E-10 66.9 8.8 86 89-180 130-217 (445)
166 cd05623 STKc_MRCK_alpha Cataly 97.9 4.3E-05 9.4E-10 66.8 8.4 60 224-283 1-74 (332)
167 KOG0608|consensus 97.9 6.9E-06 1.5E-10 75.2 3.3 66 218-283 623-702 (1034)
168 KOG4717|consensus 97.9 2.7E-06 5.9E-11 76.0 0.7 59 224-282 18-89 (864)
169 KOG0594|consensus 97.9 9.6E-06 2.1E-10 69.2 3.9 60 223-282 10-83 (323)
170 KOG0662|consensus 97.9 4.5E-06 9.8E-11 64.9 1.6 58 225-282 3-73 (292)
171 cd07872 STKc_PCTAIRE2 Catalyti 97.9 5E-05 1.1E-09 65.6 8.1 60 223-282 5-76 (309)
172 cd07873 STKc_PCTAIRE1 Catalyti 97.9 4.9E-05 1.1E-09 65.4 8.0 60 223-282 5-76 (301)
173 COG2021 MET2 Homoserine acetyl 97.9 4E-05 8.7E-10 66.2 7.2 49 131-184 137-186 (368)
174 cd05601 STKc_CRIK Catalytic do 97.9 4.6E-05 9.9E-10 66.5 7.6 58 225-282 2-73 (330)
175 cd06649 PKc_MEK2 Catalytic dom 97.9 4.8E-05 1E-09 66.5 7.7 60 223-282 4-75 (331)
176 KOG0588|consensus 97.8 1.6E-05 3.5E-10 73.1 4.2 61 222-282 10-84 (786)
177 cd06617 PKc_MKK3_6 Catalytic d 97.8 6.2E-05 1.3E-09 63.9 7.6 59 224-282 1-72 (283)
178 PF06500 DUF1100: Alpha/beta h 97.8 1.9E-05 4.2E-10 69.8 4.3 87 86-180 206-296 (411)
179 cd07876 STKc_JNK2 Catalytic do 97.8 6.5E-05 1.4E-09 66.5 7.7 60 223-282 20-92 (359)
180 cd06650 PKc_MEK1 Catalytic dom 97.8 4.8E-05 1E-09 66.7 6.7 60 223-282 4-75 (333)
181 TIGR01849 PHB_depoly_PhaZ poly 97.8 7.1E-05 1.5E-09 66.6 7.7 89 87-181 119-209 (406)
182 cd07848 STKc_CDKL5 Catalytic d 97.8 2.2E-05 4.8E-10 66.9 4.4 58 225-282 2-72 (287)
183 PLN00034 mitogen-activated pro 97.8 4.2E-05 9.2E-10 67.5 6.2 61 222-282 72-144 (353)
184 PHA03209 serine/threonine kina 97.8 3.3E-05 7.2E-10 68.4 5.5 60 223-282 65-129 (357)
185 KOG0696|consensus 97.8 2.7E-06 5.8E-11 74.1 -1.5 64 220-283 345-423 (683)
186 PF01738 DLH: Dienelactone hyd 97.8 5.3E-05 1.2E-09 62.2 6.3 86 87-178 30-130 (218)
187 PTZ00036 glycogen synthase kin 97.8 7.2E-05 1.6E-09 68.2 7.4 59 223-281 65-130 (440)
188 KOG0589|consensus 97.8 7.7E-06 1.7E-10 72.6 0.7 61 223-283 3-76 (426)
189 cd07844 STKc_PCTAIRE_like Cata 97.7 0.00012 2.7E-09 62.4 8.1 60 223-282 4-75 (291)
190 PRK10162 acetyl esterase; Prov 97.7 0.00028 6.1E-09 61.5 10.3 87 87-179 100-194 (318)
191 COG0412 Dienelactone hydrolase 97.7 0.0003 6.5E-09 58.5 9.9 86 85-176 41-142 (236)
192 cd06615 PKc_MEK Catalytic doma 97.7 0.00011 2.4E-09 63.5 7.3 58 225-282 2-71 (308)
193 PF00151 Lipase: Lipase; Inte 97.7 4.6E-05 1E-09 66.5 4.8 53 123-178 131-185 (331)
194 PF01764 Lipase_3: Lipase (cla 97.7 9E-05 2E-09 56.2 5.9 63 122-184 46-109 (140)
195 cd07874 STKc_JNK3 Catalytic do 97.7 9.6E-05 2.1E-09 65.2 6.8 60 223-282 16-88 (355)
196 cd06619 PKc_MKK5 Catalytic dom 97.7 8.4E-05 1.8E-09 63.2 6.0 58 225-282 2-71 (279)
197 PHA03211 serine/threonine kina 97.7 0.00012 2.6E-09 67.0 7.2 60 223-282 168-232 (461)
198 cd05610 STKc_MASTL Catalytic d 97.7 0.00016 3.5E-09 69.4 8.2 60 223-282 3-76 (669)
199 PRK13184 pknD serine/threonine 97.7 0.00017 3.8E-09 70.4 8.3 59 224-282 2-74 (932)
200 cd05102 PTKc_VEGFR3 Catalytic 97.6 4.1E-05 9E-10 67.0 3.7 61 222-282 5-83 (338)
201 cd05580 STKc_PKA Catalytic dom 97.6 0.00018 4E-09 61.5 7.6 58 225-282 2-73 (290)
202 cd07870 STKc_PFTAIRE2 Catalyti 97.6 0.00021 4.6E-09 61.0 7.9 59 224-282 5-75 (291)
203 cd07845 STKc_CDK10 Catalytic d 97.6 0.00021 4.6E-09 61.7 7.9 61 222-282 5-78 (309)
204 cd07878 STKc_p38beta_MAPK11 Ca 97.6 4.3E-05 9.3E-10 67.1 3.6 58 224-281 15-85 (343)
205 cd08228 STKc_Nek6 Catalytic do 97.6 0.00019 4.1E-09 60.3 7.4 59 224-282 2-74 (267)
206 PF03403 PAF-AH_p_II: Platelet 97.6 0.00011 2.4E-09 65.4 5.9 34 141-180 229-262 (379)
207 cd07875 STKc_JNK1 Catalytic do 97.6 0.00018 3.9E-09 63.8 6.8 59 223-281 23-94 (364)
208 cd06646 STKc_MAP4K5 Catalytic 97.6 0.00019 4.1E-09 60.4 6.6 60 223-282 8-78 (267)
209 cd00519 Lipase_3 Lipase (class 97.6 0.00012 2.6E-09 60.6 5.3 63 121-184 109-171 (229)
210 PTZ00266 NIMA-related protein 97.6 0.00015 3.3E-09 71.3 6.6 61 221-281 10-83 (1021)
211 KOG0198|consensus 97.6 8.2E-05 1.8E-09 64.0 4.2 56 223-278 16-82 (313)
212 cd05609 STKc_MAST Catalytic do 97.6 0.00032 6.8E-09 60.5 7.9 58 225-282 2-73 (305)
213 cd05096 PTKc_DDR1 Catalytic do 97.5 0.00016 3.4E-09 62.3 5.9 60 223-282 4-91 (304)
214 cd06652 STKc_MEKK2 Catalytic d 97.5 0.00034 7.4E-09 58.8 7.8 59 224-282 2-76 (265)
215 cd07877 STKc_p38alpha_MAPK14 C 97.5 0.00025 5.5E-09 62.4 7.2 58 224-281 17-87 (345)
216 cd07850 STKc_JNK Catalytic dom 97.5 0.00025 5.5E-09 62.5 7.2 60 223-282 15-87 (353)
217 PLN00009 cyclin-dependent kina 97.5 0.00034 7.3E-09 59.9 7.8 59 224-282 2-73 (294)
218 KOG2984|consensus 97.5 0.00012 2.6E-09 58.0 4.3 74 99-179 72-148 (277)
219 KOG4840|consensus 97.5 0.00037 7.9E-09 56.0 7.1 90 85-179 53-143 (299)
220 PF07224 Chlorophyllase: Chlor 97.5 0.00034 7.5E-09 57.7 7.1 86 84-178 59-155 (307)
221 cd07880 STKc_p38gamma_MAPK12 C 97.5 0.00028 6E-09 62.1 7.2 59 224-282 15-86 (343)
222 KOG0577|consensus 97.5 5.7E-05 1.2E-09 68.9 2.7 58 226-283 28-99 (948)
223 cd06625 STKc_MEKK3_like Cataly 97.5 0.00022 4.7E-09 59.8 6.0 59 224-282 2-76 (263)
224 cd06656 STKc_PAK3 Catalytic do 97.5 0.00038 8.2E-09 59.8 7.6 59 224-282 19-88 (297)
225 cd06641 STKc_MST3 Catalytic do 97.5 0.00022 4.7E-09 60.5 6.0 58 225-282 5-74 (277)
226 cd07865 STKc_CDK9 Catalytic do 97.5 0.00039 8.5E-09 59.8 7.6 61 222-282 10-83 (310)
227 cd05064 PTKc_EphR_A10 Catalyti 97.5 0.00022 4.7E-09 60.2 5.8 59 224-282 5-78 (266)
228 cd07856 STKc_Sty1_Hog1 Catalyt 97.5 0.00044 9.5E-09 60.4 7.9 60 223-282 9-81 (328)
229 cd07862 STKc_CDK6 Catalytic do 97.5 0.0002 4.3E-09 61.1 5.6 56 225-280 2-74 (290)
230 cd05107 PTKc_PDGFR_beta Cataly 97.5 0.00019 4.2E-09 64.6 5.6 61 222-282 35-113 (401)
231 COG4782 Uncharacterized protei 97.5 0.00083 1.8E-08 58.0 9.0 65 119-184 170-237 (377)
232 cd05104 PTKc_Kit Catalytic dom 97.4 0.00012 2.7E-09 65.2 4.0 61 222-282 33-111 (375)
233 KOG0667|consensus 97.4 0.00027 5.8E-09 64.9 6.1 57 225-281 187-259 (586)
234 PF05677 DUF818: Chlamydia CHL 97.4 0.00091 2E-08 57.5 8.8 70 91-162 164-237 (365)
235 cd07864 STKc_CDK12 Catalytic d 97.4 0.00028 6.2E-09 60.5 6.1 60 223-282 6-78 (302)
236 cd06645 STKc_MAP4K3 Catalytic 97.4 0.0002 4.4E-09 60.2 5.0 60 223-282 8-78 (267)
237 cd06616 PKc_MKK4 Catalytic dom 97.4 0.00016 3.5E-09 61.6 4.3 60 223-282 3-75 (288)
238 cd06639 STKc_myosinIIIB Cataly 97.4 0.00047 1E-08 58.9 7.1 60 223-282 21-91 (291)
239 cd05103 PTKc_VEGFR2 Catalytic 97.4 0.00011 2.4E-09 64.6 3.2 60 222-281 5-82 (343)
240 cd05090 PTKc_Ror1 Catalytic do 97.4 0.00045 9.7E-09 58.8 6.8 61 222-282 3-79 (283)
241 cd05114 PTKc_Tec_Rlk Catalytic 97.4 0.00026 5.5E-09 59.3 5.2 59 223-282 3-71 (256)
242 cd05108 PTKc_EGFR Catalytic do 97.4 0.00028 6E-09 61.2 5.5 61 222-282 5-81 (316)
243 cd07847 STKc_CDKL1_4 Catalytic 97.4 0.00032 6.8E-09 59.6 5.7 58 225-282 2-72 (286)
244 KOG0033|consensus 97.4 2.4E-06 5.1E-11 69.7 -6.9 60 223-282 10-82 (355)
245 smart00824 PKS_TE Thioesterase 97.4 0.00089 1.9E-08 53.8 8.1 87 86-178 14-100 (212)
246 cd08224 STKc_Nek6_Nek7 Catalyt 97.4 0.0007 1.5E-08 56.8 7.7 59 224-282 2-74 (267)
247 cd06653 STKc_MEKK3_like_1 Cata 97.4 0.00064 1.4E-08 57.2 7.4 59 224-282 2-76 (264)
248 PTZ00283 serine/threonine prot 97.4 0.00032 7E-09 64.9 6.0 59 222-280 30-101 (496)
249 cd06621 PKc_MAPKK_Pek1_like Ca 97.4 0.0005 1.1E-08 58.7 6.8 58 225-282 2-71 (287)
250 cd05105 PTKc_PDGFR_alpha Catal 97.4 0.00045 9.8E-09 62.2 6.7 61 222-282 35-113 (400)
251 cd06622 PKc_MAPKK_PBS2_like Ca 97.4 0.00015 3.3E-09 61.7 3.5 58 225-282 2-71 (286)
252 cd08229 STKc_Nek7 Catalytic do 97.4 0.00017 3.7E-09 60.6 3.8 59 224-282 2-74 (267)
253 cd05106 PTKc_CSF-1R Catalytic 97.4 0.00035 7.7E-09 62.2 5.9 62 221-282 35-114 (374)
254 cd07868 STKc_CDK8 Catalytic do 97.4 0.00025 5.5E-09 61.4 4.8 53 229-281 6-69 (317)
255 cd06640 STKc_MST4 Catalytic do 97.3 0.0003 6.5E-09 59.7 5.1 58 225-282 5-74 (277)
256 cd06613 STKc_MAP4K3_like Catal 97.3 0.00063 1.4E-08 56.9 6.7 59 224-282 3-72 (262)
257 cd05574 STKc_phototropin_like 97.3 0.00045 9.8E-09 59.8 6.0 58 225-282 2-73 (316)
258 PLN00413 triacylglycerol lipas 97.3 0.00055 1.2E-08 61.5 6.5 62 124-185 268-332 (479)
259 cd06620 PKc_MAPKK_Byr1_like Ca 97.3 0.00019 4.2E-09 61.1 3.6 60 223-282 4-75 (284)
260 cd07849 STKc_ERK1_2_like Catal 97.3 0.0005 1.1E-08 60.2 6.3 58 224-281 5-74 (336)
261 cd05581 STKc_PDK1 Catalytic do 97.3 0.00018 3.9E-09 60.8 3.4 58 225-282 2-74 (280)
262 cd06651 STKc_MEKK3 Catalytic d 97.3 0.00075 1.6E-08 56.8 7.1 57 225-281 3-75 (266)
263 cd06644 STKc_STK10_LOK Catalyt 97.3 0.00043 9.4E-09 59.2 5.6 59 224-282 12-81 (292)
264 cd06607 STKc_TAO Catalytic dom 97.3 0.00078 1.7E-08 58.1 7.2 59 224-282 15-87 (307)
265 cd06611 STKc_SLK_like Catalyti 97.3 0.00029 6.3E-09 59.8 4.5 59 224-282 5-74 (280)
266 cd07879 STKc_p38delta_MAPK13 C 97.3 0.00059 1.3E-08 60.0 6.5 59 224-282 15-86 (342)
267 cd06654 STKc_PAK1 Catalytic do 97.3 0.0013 2.8E-08 56.5 8.4 59 224-282 20-89 (296)
268 KOG4250|consensus 97.3 4.1E-05 8.9E-10 70.9 -0.9 57 225-281 14-82 (732)
269 cd05072 PTKc_Lyn Catalytic dom 97.3 0.00056 1.2E-08 57.3 6.0 60 222-282 4-73 (261)
270 KOG0201|consensus 97.3 0.00013 2.8E-09 64.1 2.1 58 224-281 13-82 (467)
271 cd05052 PTKc_Abl Catalytic dom 97.3 0.0005 1.1E-08 57.8 5.7 60 223-282 5-74 (263)
272 cd06638 STKc_myosinIIIA Cataly 97.3 0.00057 1.2E-08 58.1 6.1 58 223-280 17-85 (286)
273 PRK05371 x-prolyl-dipeptidyl a 97.3 0.00086 1.9E-08 65.1 7.8 86 89-179 270-372 (767)
274 cd06618 PKc_MKK7 Catalytic dom 97.3 0.00067 1.4E-08 58.2 6.5 64 219-282 10-86 (296)
275 cd07866 STKc_BUR1 Catalytic do 97.3 0.00058 1.3E-08 58.7 6.1 59 223-281 7-78 (311)
276 cd06610 STKc_OSR1_SPAK Catalyt 97.3 0.00071 1.5E-08 56.7 6.5 59 224-282 1-71 (267)
277 KOG1553|consensus 97.3 0.00096 2.1E-08 57.1 7.1 82 89-178 259-343 (517)
278 PLN02162 triacylglycerol lipas 97.3 0.0006 1.3E-08 61.1 6.1 63 123-185 261-326 (475)
279 cd06608 STKc_myosinIII_like Ca 97.3 0.00066 1.4E-08 57.1 6.3 60 223-282 5-75 (275)
280 PTZ00284 protein kinase; Provi 97.3 0.00096 2.1E-08 61.3 7.7 60 223-282 128-203 (467)
281 cd07858 STKc_TEY_MAPK_plant Ca 97.3 0.00047 1E-08 60.4 5.5 58 224-281 5-75 (337)
282 KOG0668|consensus 97.3 7.8E-05 1.7E-09 60.4 0.4 62 222-283 36-106 (338)
283 cd07846 STKc_CDKL2_3 Catalytic 97.3 0.0002 4.4E-09 60.8 3.0 58 225-282 2-72 (286)
284 PHA03207 serine/threonine kina 97.2 0.00058 1.3E-08 61.3 6.0 59 224-282 92-158 (392)
285 KOG0660|consensus 97.2 0.00045 9.8E-09 59.3 4.8 57 225-281 23-92 (359)
286 cd06609 STKc_MST3_like Catalyt 97.2 0.00046 1E-08 58.3 4.9 58 225-282 2-71 (274)
287 PF11187 DUF2974: Protein of u 97.2 0.00082 1.8E-08 55.3 6.1 54 125-180 70-123 (224)
288 cd07833 STKc_CDKL Catalytic do 97.2 0.00047 1E-08 58.6 4.9 58 225-282 2-72 (288)
289 PTZ00267 NIMA-related protein 97.2 0.00088 1.9E-08 61.8 7.0 59 224-282 67-137 (478)
290 cd06629 STKc_MAPKKK_Bck1_like 97.2 0.001 2.2E-08 56.1 6.8 58 225-282 2-80 (272)
291 cd07854 STKc_MAPK4_6 Catalytic 97.2 0.00058 1.3E-08 60.0 5.4 58 224-281 5-73 (342)
292 cd05066 PTKc_EphR_A Catalytic 97.2 0.00063 1.4E-08 57.3 5.4 59 224-282 4-77 (267)
293 PF06259 Abhydrolase_8: Alpha/ 97.2 0.0012 2.6E-08 52.1 6.5 58 121-183 89-147 (177)
294 PF02230 Abhydrolase_2: Phosph 97.2 0.00067 1.5E-08 55.6 5.3 57 119-180 83-140 (216)
295 cd05091 PTKc_Ror2 Catalytic do 97.2 0.00048 1E-08 58.5 4.6 60 223-282 4-80 (283)
296 PLN02408 phospholipase A1 97.2 0.00073 1.6E-08 59.2 5.7 62 124-185 182-245 (365)
297 cd05067 PTKc_Lck_Blk Catalytic 97.2 0.0011 2.4E-08 55.5 6.7 58 223-281 5-72 (260)
298 KOG1006|consensus 97.2 8.8E-05 1.9E-09 61.4 -0.1 61 219-279 59-132 (361)
299 cd06655 STKc_PAK2 Catalytic do 97.2 0.0009 2E-08 57.5 6.2 59 224-282 19-88 (296)
300 cd05113 PTKc_Btk_Bmx Catalytic 97.2 0.00075 1.6E-08 56.5 5.6 59 223-282 3-71 (256)
301 PF11288 DUF3089: Protein of u 97.2 0.001 2.2E-08 53.6 5.9 85 90-174 38-131 (207)
302 cd06623 PKc_MAPKK_plant_like C 97.2 0.0015 3.1E-08 54.7 7.2 58 225-282 2-71 (264)
303 PF02129 Peptidase_S15: X-Pro 97.2 0.00096 2.1E-08 56.8 6.1 82 93-179 52-135 (272)
304 cd06647 STKc_PAK_I Catalytic d 97.1 0.00079 1.7E-08 57.7 5.5 59 224-282 19-88 (293)
305 PLN00113 leucine-rich repeat r 97.1 0.00057 1.2E-08 68.5 5.3 57 226-282 692-755 (968)
306 cd06612 STKc_MST1_2 Catalytic 97.1 0.0011 2.4E-08 55.2 6.2 59 224-282 3-70 (256)
307 cd07855 STKc_ERK5 Catalytic do 97.1 0.00033 7.2E-09 61.3 3.2 58 224-281 5-75 (334)
308 KOG1026|consensus 97.1 0.0002 4.2E-09 67.8 1.8 62 220-281 482-560 (774)
309 cd05109 PTKc_HER2 Catalytic do 97.1 0.00079 1.7E-08 57.1 5.4 61 222-282 5-81 (279)
310 cd07867 STKc_CDC2L6 Catalytic 97.1 0.00082 1.8E-08 58.1 5.6 53 229-281 6-69 (317)
311 cd07843 STKc_CDC2L1 Catalytic 97.1 0.00054 1.2E-08 58.6 4.4 60 223-282 4-76 (293)
312 PHA03390 pk1 serine/threonine- 97.1 0.00089 1.9E-08 56.6 5.6 58 225-282 15-81 (267)
313 cd07837 STKc_CdkB_plant Cataly 97.1 0.0017 3.8E-08 55.4 7.4 58 225-282 2-73 (295)
314 cd05088 PTKc_Tie2 Catalytic do 97.1 0.0013 2.9E-08 56.6 6.7 62 221-282 4-80 (303)
315 cd05050 PTKc_Musk Catalytic do 97.1 0.00067 1.5E-08 57.8 4.9 60 223-282 4-80 (288)
316 cd05065 PTKc_EphR_B Catalytic 97.1 0.00085 1.8E-08 56.5 5.3 60 223-282 3-77 (269)
317 KOG0194|consensus 97.1 0.00095 2.1E-08 60.6 5.7 63 219-281 152-232 (474)
318 PF01083 Cutinase: Cutinase; 97.1 0.0019 4.1E-08 51.4 6.8 60 123-183 64-125 (179)
319 cd05032 PTKc_InsR_like Catalyt 97.1 0.0011 2.4E-08 56.0 5.9 61 222-282 4-81 (277)
320 PTZ00024 cyclin-dependent prot 97.1 0.0014 3.1E-08 57.2 6.7 55 228-282 13-92 (335)
321 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 97.1 0.0014 3E-08 55.7 6.5 58 224-281 4-76 (284)
322 KOG0607|consensus 97.1 0.0001 2.3E-09 62.5 -0.6 54 230-283 84-149 (463)
323 cd05034 PTKc_Src_like Catalyti 97.1 0.0012 2.6E-08 55.2 5.8 60 222-282 4-73 (261)
324 PTZ00472 serine carboxypeptida 97.1 0.003 6.4E-08 57.9 8.7 64 97-160 121-191 (462)
325 KOG2345|consensus 97.1 0.00019 4E-09 58.9 0.8 56 222-277 19-85 (302)
326 PLN02454 triacylglycerol lipas 97.1 0.0014 3.1E-08 58.2 6.3 63 122-185 208-275 (414)
327 cd07852 STKc_MAPK15 Catalytic 97.1 0.00076 1.6E-08 59.0 4.7 60 223-282 6-79 (337)
328 PF10503 Esterase_phd: Esteras 97.1 0.003 6.6E-08 51.8 7.8 51 124-179 79-131 (220)
329 PRK10115 protease 2; Provision 97.0 0.0014 3E-08 63.0 6.7 88 86-178 462-557 (686)
330 cd05033 PTKc_EphR Catalytic do 97.0 0.0012 2.5E-08 55.6 5.6 59 224-282 4-77 (266)
331 cd05061 PTKc_InsR Catalytic do 97.0 0.0012 2.6E-08 56.3 5.7 60 223-282 5-81 (288)
332 cd06624 STKc_ASK Catalytic dom 97.0 0.0016 3.5E-08 54.8 6.4 57 226-282 10-77 (268)
333 PLN02934 triacylglycerol lipas 97.0 0.0019 4E-08 58.6 7.0 63 123-185 304-369 (515)
334 cd05048 PTKc_Ror Catalytic Dom 97.0 0.00078 1.7E-08 57.2 4.4 61 222-282 3-80 (283)
335 cd05110 PTKc_HER4 Catalytic do 97.0 0.0014 3.1E-08 56.4 6.1 60 223-282 6-81 (303)
336 cd05148 PTKc_Srm_Brk Catalytic 97.0 0.00059 1.3E-08 57.1 3.6 59 223-282 5-74 (261)
337 COG2819 Predicted hydrolase of 97.0 0.00081 1.7E-08 56.0 4.2 50 124-179 122-171 (264)
338 cd05111 PTK_HER3 Pseudokinase 97.0 0.0012 2.6E-08 56.1 5.4 60 222-281 5-80 (279)
339 cd05059 PTKc_Tec_like Catalyti 97.0 0.00076 1.6E-08 56.4 4.1 58 224-282 4-71 (256)
340 cd05054 PTKc_VEGFR Catalytic d 97.0 0.00051 1.1E-08 60.3 3.1 59 224-282 7-83 (337)
341 cd05051 PTKc_DDR Catalytic dom 97.0 0.0013 2.9E-08 56.1 5.7 60 223-282 4-91 (296)
342 cd05068 PTKc_Frk_like Catalyti 97.0 0.0013 2.8E-08 55.1 5.5 59 223-282 5-73 (261)
343 cd05071 PTKc_Src Catalytic dom 97.0 0.00097 2.1E-08 56.1 4.7 58 223-281 5-72 (262)
344 KOG0983|consensus 97.0 0.00084 1.8E-08 56.0 4.0 65 218-282 86-163 (391)
345 PLN02310 triacylglycerol lipas 97.0 0.00077 1.7E-08 59.7 3.8 59 125-184 190-252 (405)
346 cd06635 STKc_TAO1 Catalytic do 97.0 0.0023 4.9E-08 55.5 6.8 58 225-282 26-97 (317)
347 PF07859 Abhydrolase_3: alpha/ 97.0 0.0011 2.5E-08 53.8 4.6 85 88-179 18-109 (211)
348 cd05036 PTKc_ALK_LTK Catalytic 97.0 0.0015 3.4E-08 55.3 5.6 60 223-282 5-81 (277)
349 cd06605 PKc_MAPKK Catalytic do 97.0 0.00071 1.5E-08 56.7 3.4 58 225-282 2-71 (265)
350 cd06643 STKc_SLK Catalytic dom 97.0 0.0014 3E-08 55.7 5.2 57 226-282 7-74 (282)
351 KOG0192|consensus 96.9 0.0009 2E-08 59.2 4.2 58 223-282 40-111 (362)
352 cd05039 PTKc_Csk_like Catalyti 96.9 0.0021 4.6E-08 53.6 6.1 59 222-282 4-72 (256)
353 cd05063 PTKc_EphR_A2 Catalytic 96.9 0.0021 4.5E-08 54.1 5.9 59 224-282 5-78 (268)
354 cd06642 STKc_STK25-YSK1 Cataly 96.9 0.00052 1.1E-08 58.2 2.2 58 225-282 5-74 (277)
355 cd06633 STKc_TAO3 Catalytic do 96.9 0.003 6.6E-08 54.6 7.0 57 226-282 23-93 (313)
356 PF07082 DUF1350: Protein of u 96.9 0.003 6.6E-08 52.1 6.4 93 86-187 35-132 (250)
357 PF05277 DUF726: Protein of un 96.9 0.0032 6.9E-08 54.9 7.0 57 138-194 218-277 (345)
358 cd05112 PTKc_Itk Catalytic dom 96.9 0.0019 4.1E-08 53.9 5.4 58 224-282 4-71 (256)
359 cd06637 STKc_TNIK Catalytic do 96.9 0.0018 3.8E-08 54.6 5.3 57 225-281 7-74 (272)
360 cd05062 PTKc_IGF-1R Catalytic 96.9 0.0018 4E-08 54.8 5.4 60 223-282 5-81 (277)
361 KOG1187|consensus 96.9 0.0018 3.8E-08 57.5 5.3 57 224-281 75-142 (361)
362 PRK09188 serine/threonine prot 96.9 0.0037 7.9E-08 55.4 7.2 53 222-274 16-85 (365)
363 PF00756 Esterase: Putative es 96.9 0.00098 2.1E-08 55.8 3.5 47 128-179 101-149 (251)
364 cd06636 STKc_MAP4K4_6 Catalyti 96.9 0.0022 4.8E-08 54.4 5.8 57 224-280 16-83 (282)
365 COG1506 DAP2 Dipeptidyl aminop 96.8 0.0013 2.7E-08 62.7 4.5 87 85-178 410-505 (620)
366 cd05097 PTKc_DDR_like Catalyti 96.8 0.0018 3.9E-08 55.4 5.1 59 224-282 5-89 (295)
367 cd05055 PTKc_PDGFR Catalytic d 96.8 0.002 4.3E-08 55.5 5.3 62 221-282 32-111 (302)
368 cd05101 PTKc_FGFR2 Catalytic d 96.8 0.0024 5.1E-08 55.0 5.7 64 219-282 10-93 (304)
369 cd05095 PTKc_DDR2 Catalytic do 96.8 0.0017 3.7E-08 55.6 4.8 59 224-282 5-91 (296)
370 cd05098 PTKc_FGFR1 Catalytic d 96.8 0.0029 6.4E-08 54.5 6.2 62 221-282 15-96 (307)
371 cd05057 PTKc_EGFR_like Catalyt 96.8 0.0024 5.2E-08 54.1 5.5 59 223-281 6-80 (279)
372 cd05073 PTKc_Hck Catalytic dom 96.8 0.0034 7.4E-08 52.6 6.3 59 222-281 4-72 (260)
373 cd05038 PTKc_Jak_rpt2 Catalyti 96.8 0.0037 8E-08 52.9 6.6 58 224-281 4-77 (284)
374 cd05070 PTKc_Fyn_Yrk Catalytic 96.8 0.0032 6.9E-08 52.7 5.9 58 223-281 5-72 (260)
375 cd05080 PTKc_Tyk2_rpt2 Catalyt 96.8 0.003 6.4E-08 53.7 5.8 56 226-281 6-77 (283)
376 cd05079 PTKc_Jak1_rpt2 Catalyt 96.7 0.0023 4.9E-08 54.5 5.0 58 225-282 5-78 (284)
377 KOG0614|consensus 96.7 8.1E-05 1.8E-09 66.7 -4.0 64 219-282 415-492 (732)
378 cd06659 STKc_PAK6 Catalytic do 96.7 0.001 2.2E-08 57.2 2.7 57 226-282 23-90 (297)
379 cd05083 PTKc_Chk Catalytic dom 96.7 0.0022 4.8E-08 53.5 4.7 59 222-282 4-71 (254)
380 cd07851 STKc_p38 Catalytic dom 96.7 0.0016 3.5E-08 57.2 4.0 59 223-281 14-85 (343)
381 cd05089 PTKc_Tie1 Catalytic do 96.7 0.0036 7.8E-08 53.7 5.9 59 224-282 2-75 (297)
382 cd06614 STKc_PAK Catalytic dom 96.7 0.0047 1E-07 52.5 6.5 59 224-282 19-87 (286)
383 PHA03210 serine/threonine kina 96.7 0.0017 3.7E-08 60.2 4.0 60 223-282 147-235 (501)
384 KOG1151|consensus 96.7 0.00037 8E-09 61.7 -0.4 59 224-282 463-539 (775)
385 PF12048 DUF3530: Protein of u 96.7 0.022 4.8E-07 49.4 10.5 53 124-181 178-230 (310)
386 KOG0666|consensus 96.7 0.00014 3E-09 61.6 -3.0 60 222-281 22-98 (438)
387 cd05053 PTKc_FGFR Catalytic do 96.7 0.0042 9E-08 53.0 6.0 62 221-282 9-88 (293)
388 KOG4391|consensus 96.7 0.001 2.2E-08 53.4 1.9 76 96-178 104-182 (300)
389 cd05049 PTKc_Trk Catalytic dom 96.6 0.0026 5.6E-08 53.8 4.4 60 223-282 4-80 (280)
390 cd06917 STKc_NAK1_like Catalyt 96.6 0.0024 5.3E-08 53.9 4.3 58 225-282 2-74 (277)
391 cd06648 STKc_PAK_II Catalytic 96.6 0.0049 1.1E-07 52.5 6.2 57 226-282 21-88 (285)
392 PHA02988 hypothetical protein; 96.6 0.0053 1.1E-07 52.4 6.2 50 230-281 26-89 (283)
393 cd05093 PTKc_TrkB Catalytic do 96.6 0.0049 1.1E-07 52.5 6.0 59 224-282 5-79 (288)
394 cd05046 PTK_CCK4 Pseudokinase 96.6 0.0035 7.6E-08 52.9 5.1 59 224-282 5-80 (275)
395 cd05092 PTKc_TrkA Catalytic do 96.6 0.0041 8.8E-08 52.8 5.4 59 224-282 5-79 (280)
396 cd06657 STKc_PAK4 Catalytic do 96.6 0.0027 5.8E-08 54.5 4.2 54 229-282 25-89 (292)
397 KOG0199|consensus 96.6 0.0017 3.6E-08 60.8 3.0 59 224-282 110-183 (1039)
398 cd05082 PTKc_Csk Catalytic dom 96.5 0.0057 1.2E-07 51.0 6.0 57 222-280 4-69 (256)
399 cd05100 PTKc_FGFR3 Catalytic d 96.5 0.0041 8.9E-08 54.3 5.3 61 222-282 10-90 (334)
400 cd05069 PTKc_Yes Catalytic dom 96.5 0.0047 1E-07 51.7 5.4 58 223-281 5-72 (260)
401 KOG0197|consensus 96.5 0.0022 4.7E-08 57.7 3.3 60 222-282 204-273 (468)
402 cd06634 STKc_TAO2 Catalytic do 96.5 0.0058 1.3E-07 52.7 6.0 58 225-282 16-87 (308)
403 PLN03037 lipase class 3 family 96.5 0.0035 7.6E-08 57.0 4.6 46 140-185 318-363 (525)
404 cd05043 PTK_Ryk Pseudokinase d 96.5 0.0057 1.2E-07 51.8 5.6 59 223-281 5-79 (280)
405 PF12715 Abhydrolase_7: Abhydr 96.5 0.0077 1.7E-07 52.9 6.3 84 89-178 151-258 (390)
406 PLN02802 triacylglycerol lipas 96.5 0.005 1.1E-07 55.9 5.3 61 125-185 313-375 (509)
407 PF03583 LIP: Secretory lipase 96.5 0.008 1.7E-07 51.7 6.4 69 88-160 16-91 (290)
408 cd05056 PTKc_FAK Catalytic dom 96.4 0.0053 1.2E-07 51.7 5.2 60 223-282 5-79 (270)
409 cd06658 STKc_PAK5 Catalytic do 96.4 0.0027 5.7E-08 54.4 3.4 57 226-282 24-91 (292)
410 KOG0574|consensus 96.4 0.0002 4.2E-09 60.3 -3.5 56 224-279 33-97 (502)
411 KOG1094|consensus 96.4 0.0051 1.1E-07 56.5 5.1 59 221-280 535-605 (807)
412 KOG0578|consensus 96.4 0.0012 2.7E-08 59.8 1.2 57 224-280 273-340 (550)
413 cd05094 PTKc_TrkC Catalytic do 96.4 0.0073 1.6E-07 51.5 5.8 60 223-282 4-79 (291)
414 PLN02571 triacylglycerol lipas 96.3 0.0093 2E-07 53.1 6.2 61 124-185 208-279 (413)
415 KOG3847|consensus 96.3 0.014 3E-07 49.6 6.8 32 141-178 242-273 (399)
416 KOG1290|consensus 96.3 0.012 2.6E-07 52.9 6.7 58 224-281 78-153 (590)
417 KOG0587|consensus 96.3 0.0094 2E-07 57.1 6.3 59 222-280 17-86 (953)
418 PHA02882 putative serine/threo 96.2 0.011 2.4E-07 50.6 6.1 57 224-280 12-93 (294)
419 PLN02324 triacylglycerol lipas 96.2 0.01 2.2E-07 52.9 5.7 63 122-185 195-269 (415)
420 PF05448 AXE1: Acetyl xylan es 96.2 0.04 8.7E-07 48.0 9.4 84 93-183 104-211 (320)
421 cd05099 PTKc_FGFR4 Catalytic d 96.2 0.016 3.4E-07 50.2 6.8 61 222-282 10-90 (314)
422 PRK10439 enterobactin/ferric e 96.2 0.0089 1.9E-07 53.9 5.3 35 140-179 288-322 (411)
423 COG4188 Predicted dienelactone 96.2 0.023 5E-07 49.6 7.5 75 87-161 87-180 (365)
424 KOG0193|consensus 96.2 0.0027 5.8E-08 58.4 1.9 58 222-282 390-460 (678)
425 KOG4257|consensus 96.1 0.0057 1.2E-07 56.7 3.9 56 226-281 391-462 (974)
426 KOG1095|consensus 96.1 0.0082 1.8E-07 59.1 5.2 58 223-280 691-765 (1025)
427 COG3946 VirJ Type IV secretory 96.1 0.015 3.2E-07 51.2 6.1 87 85-176 274-361 (456)
428 KOG0576|consensus 96.1 0.00069 1.5E-08 62.8 -2.1 58 223-280 14-82 (829)
429 KOG2052|consensus 96.1 0.0068 1.5E-07 53.8 4.0 58 219-278 206-273 (513)
430 KOG0584|consensus 96.1 0.0023 5.1E-08 58.8 1.2 56 228-283 44-114 (632)
431 PF05577 Peptidase_S28: Serine 96.1 0.021 4.4E-07 52.1 7.3 79 98-181 60-149 (434)
432 PLN02753 triacylglycerol lipas 96.0 0.014 3E-07 53.3 5.7 63 123-185 290-363 (531)
433 COG3458 Acetyl esterase (deace 96.0 0.023 5E-07 47.4 6.3 78 95-178 106-208 (321)
434 KOG1989|consensus 96.0 0.017 3.7E-07 55.1 6.2 55 224-278 37-103 (738)
435 PF11339 DUF3141: Protein of u 95.9 0.067 1.4E-06 48.8 9.4 81 89-179 92-174 (581)
436 KOG4279|consensus 95.8 0.0038 8.3E-08 58.5 1.4 51 231-281 582-643 (1226)
437 KOG2565|consensus 95.8 0.069 1.5E-06 46.6 8.8 70 99-175 189-259 (469)
438 PLN02719 triacylglycerol lipas 95.8 0.018 3.8E-07 52.5 5.3 62 123-185 276-349 (518)
439 KOG0984|consensus 95.8 0.0065 1.4E-07 48.8 2.2 60 223-282 45-117 (282)
440 COG0400 Predicted esterase [Ge 95.7 0.02 4.4E-07 46.5 5.1 52 122-178 79-132 (207)
441 KOG3653|consensus 95.7 0.006 1.3E-07 54.5 2.2 55 223-279 209-273 (534)
442 PRK04940 hypothetical protein; 95.7 0.03 6.5E-07 44.2 5.7 49 124-180 44-92 (180)
443 KOG3975|consensus 95.7 0.1 2.2E-06 43.2 8.8 90 84-176 42-143 (301)
444 KOG4372|consensus 95.6 0.005 1.1E-07 54.1 1.3 44 140-183 150-197 (405)
445 KOG1345|consensus 95.6 0.0029 6.4E-08 52.8 -0.1 58 224-281 24-93 (378)
446 KOG3043|consensus 95.6 0.021 4.5E-07 46.3 4.6 85 88-178 57-152 (242)
447 PLN02761 lipase class 3 family 95.6 0.024 5.3E-07 51.7 5.6 61 124-185 272-346 (527)
448 KOG4627|consensus 95.6 0.021 4.6E-07 45.7 4.6 83 89-179 88-171 (270)
449 KOG0196|consensus 95.6 0.021 4.5E-07 54.3 5.2 59 223-281 628-701 (996)
450 PLN02847 triacylglycerol lipas 95.5 0.021 4.6E-07 52.8 4.9 36 124-159 235-270 (633)
451 KOG0579|consensus 95.5 0.00066 1.4E-08 62.7 -4.7 56 224-279 32-98 (1187)
452 KOG4569|consensus 95.5 0.029 6.2E-07 49.3 5.4 61 124-184 155-216 (336)
453 PF08840 BAAT_C: BAAT / Acyl-C 95.4 0.015 3.3E-07 47.5 3.4 49 126-180 6-56 (213)
454 COG3150 Predicted esterase [Ge 95.4 0.031 6.8E-07 43.2 4.8 54 105-162 28-81 (191)
455 KOG2183|consensus 95.4 0.044 9.5E-07 48.4 6.1 90 84-180 100-202 (492)
456 KOG4278|consensus 95.3 0.0082 1.8E-07 55.7 1.6 57 224-280 267-333 (1157)
457 KOG0603|consensus 95.3 0.013 2.9E-07 54.1 2.9 61 222-282 320-388 (612)
458 KOG1025|consensus 95.2 0.015 3.2E-07 55.7 3.0 55 226-280 698-768 (1177)
459 KOG1163|consensus 95.2 0.032 6.9E-07 46.0 4.5 39 222-260 13-51 (341)
460 COG3509 LpqC Poly(3-hydroxybut 95.2 0.18 3.8E-06 42.8 8.8 55 121-180 123-179 (312)
461 KOG2281|consensus 95.1 0.027 5.9E-07 52.3 4.1 73 91-164 669-751 (867)
462 KOG0604|consensus 95.0 0.0047 1E-07 52.2 -0.7 60 223-282 60-127 (400)
463 COG0657 Aes Esterase/lipase [L 95.0 0.089 1.9E-06 45.6 7.1 84 88-178 100-189 (312)
464 KOG0599|consensus 94.8 0.012 2.5E-07 49.4 0.9 58 225-282 18-95 (411)
465 KOG4540|consensus 94.7 0.061 1.3E-06 45.2 5.0 45 119-163 255-299 (425)
466 COG5153 CVT17 Putative lipase 94.7 0.061 1.3E-06 45.2 5.0 45 119-163 255-299 (425)
467 PLN03225 Serine/threonine-prot 94.4 0.073 1.6E-06 50.2 5.4 40 220-259 128-171 (566)
468 PF02273 Acyl_transf_2: Acyl t 94.3 0.2 4.4E-06 41.4 7.0 74 87-161 46-122 (294)
469 KOG4645|consensus 94.3 0.014 3E-07 58.4 0.5 55 226-280 1237-1304(1509)
470 PLN03224 probable serine/threo 94.2 0.077 1.7E-06 49.2 5.1 41 219-259 140-196 (507)
471 COG0627 Predicted esterase [Ge 94.1 0.061 1.3E-06 46.6 4.0 50 124-178 135-185 (316)
472 KOG3967|consensus 93.8 0.27 5.9E-06 39.7 6.6 44 139-186 189-232 (297)
473 KOG2931|consensus 93.7 0.3 6.6E-06 41.4 7.0 78 91-178 72-155 (326)
474 PF09752 DUF2048: Uncharacteri 93.6 0.31 6.6E-06 42.6 7.3 80 90-177 113-207 (348)
475 PRK10345 hypothetical protein; 93.6 0.16 3.5E-06 41.4 5.3 15 268-282 59-73 (210)
476 PF03096 Ndr: Ndr family; Int 93.4 0.19 4.1E-06 42.6 5.6 82 92-179 50-133 (283)
477 KOG4721|consensus 93.1 0.066 1.4E-06 49.4 2.5 49 229-279 129-181 (904)
478 KOG1515|consensus 92.9 0.67 1.5E-05 40.6 8.3 100 83-184 107-211 (336)
479 KOG2237|consensus 92.6 0.094 2E-06 48.9 2.7 85 86-175 487-579 (712)
480 KOG3101|consensus 92.4 0.013 2.8E-07 47.1 -2.6 38 140-179 141-178 (283)
481 smart00090 RIO RIO-like kinase 92.2 0.14 3E-06 42.6 3.2 35 225-259 29-64 (237)
482 COG2936 Predicted acyl esteras 91.9 0.16 3.4E-06 47.2 3.4 82 93-179 75-158 (563)
483 KOG0669|consensus 91.9 0.0036 7.9E-08 51.7 -6.4 54 224-277 17-83 (376)
484 COG2272 PnbA Carboxylesterase 91.6 0.66 1.4E-05 42.3 6.9 37 141-180 181-217 (491)
485 PRK10359 lipopolysaccharide co 91.6 0.45 9.7E-06 39.4 5.4 56 224-281 31-106 (232)
486 KOG1165|consensus 90.6 0.21 4.6E-06 43.2 2.7 37 223-259 27-63 (449)
487 COG1770 PtrB Protease II [Amin 90.3 0.31 6.8E-06 45.7 3.6 91 86-182 465-563 (682)
488 PF11144 DUF2920: Protein of u 89.7 0.62 1.3E-05 41.5 4.9 49 125-178 165-217 (403)
489 COG4099 Predicted peptidase [G 89.4 1.1 2.4E-05 38.2 5.9 36 139-179 268-303 (387)
490 PF04083 Abhydro_lipase: Parti 88.8 0.27 5.9E-06 31.6 1.5 18 8-25 39-56 (63)
491 KOG2385|consensus 88.7 1.1 2.4E-05 41.0 5.7 58 137-194 444-504 (633)
492 KOG2182|consensus 88.6 2.2 4.7E-05 39.0 7.6 85 92-181 112-208 (514)
493 PF10340 DUF2424: Protein of u 88.4 0.91 2E-05 40.2 5.0 59 123-182 178-236 (374)
494 PF08237 PE-PPE: PE-PPE domain 88.0 0.97 2.1E-05 37.3 4.7 43 138-180 46-89 (225)
495 KOG0670|consensus 87.9 0.6 1.3E-05 42.9 3.6 38 225-262 433-470 (752)
496 KOG1167|consensus 87.8 0.15 3.3E-06 45.1 -0.2 61 223-283 35-108 (418)
497 KOG2112|consensus 87.8 1.1 2.4E-05 36.0 4.7 56 118-178 70-126 (206)
498 cd05144 RIO2_C RIO kinase fami 87.1 0.65 1.4E-05 37.2 3.2 33 226-259 17-49 (198)
499 COG2382 Fes Enterochelin ester 87.1 0.62 1.4E-05 39.7 3.1 32 142-178 179-210 (299)
500 PRK04750 ubiB putative ubiquin 86.3 0.64 1.4E-05 43.5 3.1 35 225-260 121-155 (537)
No 1
>KOG2369|consensus
Probab=99.97 E-value=9.6e-31 Score=226.80 Aligned_cols=181 Identities=43% Similarity=0.787 Sum_probs=167.3
Q ss_pred cEEEecCCccccceEEec-CCCcce-eeeccCCCCccc--ccccccccccccccccccceeeeeeCCCCCc---------
Q psy4395 14 VRKEMPGDGGSQVEARLN-KTETVH-YICDKTTSNWFT--LWLNLELLVPEVIDCFIDNLRLVYNNVTHPF--------- 80 (283)
Q Consensus 14 pvv~ipG~~gs~L~~~~~-~~~~~~-~~c~~~~~~~~~--~w~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--------- 80 (283)
||++|||.+|+.|++.+. +|+..+ |.|.+.+..+|| +|.+..++++..++||.+...+.+|+.++.+
T Consensus 32 pv~lv~g~gg~~l~~v~~~~p~vv~~W~~~~~a~~~FrkrLW~~~~~l~~~~~~cw~~~~~lvld~~tGLd~pg~~lRvp 111 (473)
T KOG2369|consen 32 PVLLVPGDGGSQLHPVLDGKPGVVRLWVCIKCAEGYFRKRLWLDLNMLLPKTIDCWCDNEHLVLDPETGLDPPGVKLRVP 111 (473)
T ss_pred ceEEecCCccccccceecCCCCEEEEEEeecCchHHHhHHHhhhccccccccccccccceEEeecCccCCCCCcceeecC
Confidence 999999999999999999 899888 999999989997 9999999999999999999999999998776
Q ss_pred cc-------cc-chHHHHHHHHHhCCcccCCCcCcCCCCCCCCC---CcchHHHHHHHHHHHHHHHHcCCCCEEEEEeCc
Q psy4395 81 VR-------VG-SYFSYIAAALVGLGYQRDLSMRGAPYDFRKAP---NENQEYFANFKALIEETYDLNGGTPVVLVAHSM 149 (283)
Q Consensus 81 ~~-------~~-~~~~~l~~~L~~~g~~~~~d~~g~g~~~r~~~---~~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSm 149 (283)
+- .+ .||+.+++.|...||.-.-+++|++||||++. ...+.++.+|+..||...+.++++||+||+|||
T Consensus 112 gf~s~~~ld~~y~~w~~~i~~lv~~GYe~~~~l~ga~YDwRls~~~~e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSM 191 (473)
T KOG2369|consen 112 GFESLDYLDPGYWYWHELIENLVGIGYERGKTLFGAPYDWRLSYHNSEERDQYLSKLKKKIETMYKLNGGKKVVLISHSM 191 (473)
T ss_pred CceeeecccchhHHHHHHHHHHHhhCcccCceeeccccchhhccCChhHHHHHHHHHHHHHHHHHHHcCCCceEEEecCC
Confidence 00 11 37999999999999998889999999999954 468899999999999999999988999999999
Q ss_pred ccHHHHHHHHcCCh---hHHhhhhcceEEecCCCCcchhhHHHHhhhc
Q psy4395 150 GSLMCLYFLQRQSS---AWKSKFVRSLVSLAAPWGGSVKAVKVFAVEN 194 (283)
Q Consensus 150 Gg~va~~~~~~~~~---~~~~~~v~~~i~i~~p~~g~~~~~~~~~~g~ 194 (283)
||++.++|+.++++ .|++++|+++|.+++|+.|+++++..+.+|+
T Consensus 192 G~l~~lyFl~w~~~~~~~W~~k~I~sfvnig~p~lG~~k~v~~l~Sge 239 (473)
T KOG2369|consen 192 GGLYVLYFLKWVEAEGPAWCDKYIKSFVNIGAPWLGSPKAVKLLASGE 239 (473)
T ss_pred ccHHHHHHHhcccccchhHHHHHHHHHHccCchhcCChHHHhHhhccc
Confidence 99999999999998 8999999999999999999999999999993
No 2
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=99.97 E-value=1.6e-30 Score=231.83 Aligned_cols=179 Identities=24% Similarity=0.359 Sum_probs=147.2
Q ss_pred ccCCCCccEEEecCCccccceEEecCCCcceeeeccCCCCcccccccc-cccccccccccccceeeeeeCCCCCc-----
Q psy4395 7 RCQETVEVRKEMPGDGGSQVEARLNKTETVHYICDKTTSNWFTLWLNL-ELLVPEVIDCFIDNLRLVYNNVTHPF----- 80 (283)
Q Consensus 7 ~~~~~~~pvv~ipG~~gs~L~~~~~~~~~~~~~c~~~~~~~~~~w~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~----- 80 (283)
.|.. ++||||||||++|.|+.|.++ .|++.. .+.|+|.+. .++ -...+||.++++| |+.++..
T Consensus 70 g~~~-khPVVlVPGiiStgLE~W~~~------~C~~~~-frkRlWg~~~~~~-~~~~~CWld~m~L--D~~Tg~dppGVk 138 (642)
T PLN02517 70 GLTA-KHPVVFVPGIVTGGLELWEGH------QCAEGL-FRKRLWGGTFGEV-YKRPLCWVEHMSL--DNETGLDPPGIR 138 (642)
T ss_pred CCCc-CCCEEEeCchhhcchhhccCc------ccccch-hhhccccchhhhe-ecCHHHHHHhcee--CCCCCCCCCCeE
Confidence 4554 999999999999999988764 255521 235999963 332 2345899999999 6665443
Q ss_pred -----------ccccch--HHHHHHHHHhCCcccCCCcCcCCCCCCCCCC---cchHHHHHHHHHHHHHHHHcCCCCEEE
Q psy4395 81 -----------VRVGSY--FSYIAAALVGLGYQRDLSMRGAPYDFRKAPN---ENQEYFANFKALIEETYDLNGGTPVVL 144 (283)
Q Consensus 81 -----------~~~~~~--~~~l~~~L~~~g~~~~~d~~g~g~~~r~~~~---~~~~~~~~l~~~i~~~~~~~~~~~v~l 144 (283)
.....| |..+++.|++.||. ..|++|++||||.++. ..+.|+.+|+..||.+.+.++++||+|
T Consensus 139 IRa~~G~~AvD~f~pgY~vw~kLIe~L~~iGY~-~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~nggkKVVL 217 (642)
T PLN02517 139 VRAVSGLVAADYFAPGYFVWAVLIANLARIGYE-EKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVATNGGKKVVV 217 (642)
T ss_pred EEecCChheehhccccceeHHHHHHHHHHcCCC-CCceeecccccccCccchhhhhHHHHHHHHHHHHHHHHcCCCeEEE
Confidence 112334 49999999999998 7899999999999854 358899999999999998887789999
Q ss_pred EEeCcccHHHHHHHHcCC----------hhHHhhhhcceEEecCCCCcchhhHHHHhhhcchh
Q psy4395 145 VAHSMGSLMCLYFLQRQS----------SAWKSKFVRSLVSLAAPWGGSVKAVKVFAVENKEN 197 (283)
Q Consensus 145 vgHSmGg~va~~~~~~~~----------~~~~~~~v~~~i~i~~p~~g~~~~~~~~~~g~~~~ 197 (283)
|||||||+++++|+.+.. +.|++++|+++|.+++|+.|+++++.++++|+..+
T Consensus 218 V~HSMGglv~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~lGs~Kav~allSGE~kd 280 (642)
T PLN02517 218 VPHSMGVLYFLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPFLGVPKAVSGLFSAEAKD 280 (642)
T ss_pred EEeCCchHHHHHHHHhccccccccCCcchHHHHHHHHHheecccccCCcHHHHHHHhcccccc
Confidence 999999999999998753 78999999999999999999999999999998654
No 3
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=99.96 E-value=1.1e-28 Score=219.68 Aligned_cols=171 Identities=26% Similarity=0.399 Sum_probs=134.5
Q ss_pred CCCCccEEEecCCccccceEEecCCCcceeeeccCCCCcccccccccccccccccccccceeeeeeCCCCCc--------
Q psy4395 9 QETVEVRKEMPGDGGSQVEARLNKTETVHYICDKTTSNWFTLWLNLELLVPEVIDCFIDNLRLVYNNVTHPF-------- 80 (283)
Q Consensus 9 ~~~~~pvv~ipG~~gs~L~~~~~~~~~~~~~c~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-------- 80 (283)
+.+++|||||||+|||.|+|+.++.. +..++|++.....+ |..+++.+.||+.++.+
T Consensus 16 ~~~~~PViLvPG~~gS~L~a~~~~~~-----------~~~~~W~~l~~~~~----~~~~~l~~~yd~~t~~~~~~~~gv~ 80 (440)
T PLN02733 16 DPDLDPVLLVPGIGGSILNAVDKDGG-----------NEERVWVRIFAADH----EFRKKLWSRYDPKTGKTVSLDPKTE 80 (440)
T ss_pred CCCCCcEEEeCCCCcceeEEeecCCC-----------CccceeEEchhcCH----HHHHHhhheeCcccCceecCCCCce
Confidence 45699999999999999999864311 12366666544433 33444445555554322
Q ss_pred -----------------------ccccchHHHHHHHHHhCCcccCCCcCcCCCCCCCCCCcchHHHHHHHHHHHHHHHHc
Q psy4395 81 -----------------------VRVGSYFSYIAAALVGLGYQRDLSMRGAPYDFRKAPNENQEYFANFKALIEETYDLN 137 (283)
Q Consensus 81 -----------------------~~~~~~~~~l~~~L~~~g~~~~~d~~g~g~~~r~~~~~~~~~~~~l~~~i~~~~~~~ 137 (283)
.....||+.+++.|++.||+...|++|+|||||.+ ...+.+++++++.|+.+.+.+
T Consensus 81 i~vp~~~~g~~~i~~ldp~~~~~~~~~~~~~~li~~L~~~GY~~~~dL~g~gYDwR~~-~~~~~~~~~Lk~lIe~~~~~~ 159 (440)
T PLN02733 81 IVVPDDRYGLYAIDILDPDVIIRLDEVYYFHDMIEQLIKWGYKEGKTLFGFGYDFRQS-NRLPETMDGLKKKLETVYKAS 159 (440)
T ss_pred EEcCCCCCCceeeEEecCccccCcchHHHHHHHHHHHHHcCCccCCCcccCCCCcccc-ccHHHHHHHHHHHHHHHHHHc
Confidence 12346899999999999998899999999999985 345778899999999999988
Q ss_pred CCCCEEEEEeCcccHHHHHHHHcCChhHHhhhhcceEEecCCCCcchhh-HHHHhhhcch
Q psy4395 138 GGTPVVLVAHSMGSLMCLYFLQRQSSAWKSKFVRSLVSLAAPWGGSVKA-VKVFAVENKE 196 (283)
Q Consensus 138 ~~~~v~lvgHSmGg~va~~~~~~~~~~~~~~~v~~~i~i~~p~~g~~~~-~~~~~~g~~~ 196 (283)
+.+||+||||||||++++.|+..+|+.| +++|+++|++++|+.|++.+ ...+.+|...
T Consensus 160 g~~kV~LVGHSMGGlva~~fl~~~p~~~-~k~I~~~I~la~P~~Gs~~~i~~~l~~g~~~ 218 (440)
T PLN02733 160 GGKKVNIISHSMGGLLVKCFMSLHSDVF-EKYVNSWIAIAAPFQGAPGFITDSLLTGVSF 218 (440)
T ss_pred CCCCEEEEEECHhHHHHHHHHHHCCHhH-HhHhccEEEECCCCCCCchhHHHHHhcCchh
Confidence 8889999999999999999999998866 67899999999999999877 4567777543
No 4
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=99.94 E-value=9.7e-27 Score=206.47 Aligned_cols=152 Identities=45% Similarity=0.876 Sum_probs=137.0
Q ss_pred cccccccccccccccccccccceeeeeeCCCCCc-------------c-----------ccc--chHHHHHHHHHhCCcc
Q psy4395 47 WFTLWLNLELLVPEVIDCFIDNLRLVYNNVTHPF-------------V-----------RVG--SYFSYIAAALVGLGYQ 100 (283)
Q Consensus 47 ~~~~w~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-------------~-----------~~~--~~~~~l~~~L~~~g~~ 100 (283)
+|++|++...++|...+||.+.+++.||+.+... + ... .||+.+++.|++.||+
T Consensus 1 ~~~~W~~~~~~~~~~~~c~~~~~~l~~d~~~~~~~~~~gv~i~~~~~g~~~~i~~ld~~~~~~~~~~~~li~~L~~~GY~ 80 (389)
T PF02450_consen 1 YFELWLNLELFIPRVWDCFFDNMRLVYDPKTWHYSNDPGVEIRVPGFGGTSGIEYLDPSFITGYWYFAKLIENLEKLGYD 80 (389)
T ss_pred CccccCCCcccccccCCcccccceEEEcCCCCceecCCCceeecCCCCceeeeeecccccccccchHHHHHHHHHhcCcc
Confidence 4689999999999999999999999999988643 1 011 1699999999999999
Q ss_pred cCCCcCcCCCCCCCCCCcchHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCChh-HHhhhhcceEEecCC
Q psy4395 101 RDLSMRGAPYDFRKAPNENQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSSA-WKSKFVRSLVSLAAP 179 (283)
Q Consensus 101 ~~~d~~g~g~~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~~~-~~~~~v~~~i~i~~p 179 (283)
...|+++++||||.++...+.++.+|++.||.+.+.+ ++||+||||||||+++++|+...+.. |++++|+++|++++|
T Consensus 81 ~~~~l~~~pYDWR~~~~~~~~~~~~lk~~ie~~~~~~-~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p 159 (389)
T PF02450_consen 81 RGKDLFAAPYDWRLSPAERDEYFTKLKQLIEEAYKKN-GKKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTP 159 (389)
T ss_pred cCCEEEEEeechhhchhhHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCC
Confidence 9999999999999998878899999999999999887 77999999999999999999999877 999999999999999
Q ss_pred CCcchhhHHHHhhhcchhHH
Q psy4395 180 WGGSVKAVKVFAVENKENVE 199 (283)
Q Consensus 180 ~~g~~~~~~~~~~g~~~~~~ 199 (283)
+.|++.++..+.+|+..+..
T Consensus 160 ~~Gs~~a~~~~~sG~~~~~~ 179 (389)
T PF02450_consen 160 FGGSPKALRALLSGDNEGIP 179 (389)
T ss_pred CCCChHHHHHHhhhhhhhhh
Confidence 99999999999999977643
No 5
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.62 E-value=2e-15 Score=129.64 Aligned_cols=92 Identities=28% Similarity=0.460 Sum_probs=77.5
Q ss_pred HHHHHHHHHhCCc-ccCCCcCcCCCCC---CCCCCcchHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCC
Q psy4395 87 FSYIAAALVGLGY-QRDLSMRGAPYDF---RKAPNENQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQS 162 (283)
Q Consensus 87 ~~~l~~~L~~~g~-~~~~d~~g~g~~~---r~~~~~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~ 162 (283)
|..++..|..+|| |+++|+||||.+- |.....++++.+|+..+++.+...++..|++|+||||||+|++.++.+++
T Consensus 50 y~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~ 129 (298)
T COG2267 50 YEELADDLAARGFDVYALDLRGHGRSPRGQRGHVDSFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYP 129 (298)
T ss_pred HHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCchhHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCC
Confidence 5589999999999 9999999999885 33333588899999999999987777889999999999999999999998
Q ss_pred hhHHhhhhcceEEecCCCCcch
Q psy4395 163 SAWKSKFVRSLVSLAAPWGGSV 184 (283)
Q Consensus 163 ~~~~~~~v~~~i~i~~p~~g~~ 184 (283)
.. |+++|+.+ |+.+..
T Consensus 130 ~~-----i~~~vLss-P~~~l~ 145 (298)
T COG2267 130 PR-----IDGLVLSS-PALGLG 145 (298)
T ss_pred cc-----ccEEEEEC-ccccCC
Confidence 65 99988664 544443
No 6
>PRK10749 lysophospholipase L2; Provisional
Probab=99.60 E-value=4.2e-15 Score=130.02 Aligned_cols=88 Identities=23% Similarity=0.286 Sum_probs=72.7
Q ss_pred HHHHHHHHHhCCc-ccCCCcCcCCCCCCCCC-------CcchHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHH
Q psy4395 87 FSYIAAALVGLGY-QRDLSMRGAPYDFRKAP-------NENQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFL 158 (283)
Q Consensus 87 ~~~l~~~L~~~g~-~~~~d~~g~g~~~r~~~-------~~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~ 158 (283)
|..++..|.+.|| ++++|+||||.|.+... .+.+++.+++.++++.+....+..|++++||||||.+++.++
T Consensus 70 y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a 149 (330)
T PRK10749 70 YAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFL 149 (330)
T ss_pred HHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCccccHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHH
Confidence 5578888999999 99999999997754311 256788889999998876555567999999999999999999
Q ss_pred HcCChhHHhhhhcceEEecCC
Q psy4395 159 QRQSSAWKSKFVRSLVSLAAP 179 (283)
Q Consensus 159 ~~~~~~~~~~~v~~~i~i~~p 179 (283)
..+|+. |+++|+++++
T Consensus 150 ~~~p~~-----v~~lvl~~p~ 165 (330)
T PRK10749 150 QRHPGV-----FDAIALCAPM 165 (330)
T ss_pred HhCCCC-----cceEEEECch
Confidence 999987 8999988664
No 7
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.59 E-value=7.7e-15 Score=129.38 Aligned_cols=89 Identities=18% Similarity=0.179 Sum_probs=72.5
Q ss_pred hHHHHHHHHHhCCc-ccCCCcCcCCCCCCCC--CCcchHHHHHHHHHHHHHHHH--cCCCCEEEEEeCcccHHHHHHHHc
Q psy4395 86 YFSYIAAALVGLGY-QRDLSMRGAPYDFRKA--PNENQEYFANFKALIEETYDL--NGGTPVVLVAHSMGSLMCLYFLQR 160 (283)
Q Consensus 86 ~~~~l~~~L~~~g~-~~~~d~~g~g~~~r~~--~~~~~~~~~~l~~~i~~~~~~--~~~~~v~lvgHSmGg~va~~~~~~ 160 (283)
+|..++..|++.|| ++++|+||||.+.... ..+++++++|+.++++.+... .+..+++|+||||||.+++.++..
T Consensus 103 ~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~ 182 (349)
T PLN02385 103 FFEGIARKIASSGYGVFAMDYPGFGLSEGLHGYIPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLK 182 (349)
T ss_pred HHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHh
Confidence 46788999999999 9999999999775321 125677888888888877543 234589999999999999999999
Q ss_pred CChhHHhhhhcceEEecCC
Q psy4395 161 QSSAWKSKFVRSLVSLAAP 179 (283)
Q Consensus 161 ~~~~~~~~~v~~~i~i~~p 179 (283)
+|+. |+++|++++.
T Consensus 183 ~p~~-----v~glVLi~p~ 196 (349)
T PLN02385 183 QPNA-----WDGAILVAPM 196 (349)
T ss_pred Ccch-----hhheeEeccc
Confidence 9987 8999999764
No 8
>PHA02857 monoglyceride lipase; Provisional
Probab=99.58 E-value=1.5e-14 Score=123.32 Aligned_cols=90 Identities=14% Similarity=0.206 Sum_probs=73.1
Q ss_pred hHHHHHHHHHhCCc-ccCCCcCcCCCCCCC--CCCcchHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCC
Q psy4395 86 YFSYIAAALVGLGY-QRDLSMRGAPYDFRK--APNENQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQS 162 (283)
Q Consensus 86 ~~~~l~~~L~~~g~-~~~~d~~g~g~~~r~--~~~~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~ 162 (283)
.|..+++.|++.|| ++++|+||||.+.+. ....+..+.+|+.+.++.+....+..|++|+||||||.+++.++..+|
T Consensus 40 ~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p 119 (276)
T PHA02857 40 RYEELAENISSLGILVFSHDHIGHGRSNGEKMMIDDFGVYVRDVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNP 119 (276)
T ss_pred hHHHHHHHHHhCCCEEEEccCCCCCCCCCccCCcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCc
Confidence 36788999999999 999999999976432 223456677788888877766566668999999999999999999998
Q ss_pred hhHHhhhhcceEEecCCC
Q psy4395 163 SAWKSKFVRSLVSLAAPW 180 (283)
Q Consensus 163 ~~~~~~~v~~~i~i~~p~ 180 (283)
+. |+++|+++++.
T Consensus 120 ~~-----i~~lil~~p~~ 132 (276)
T PHA02857 120 NL-----FTAMILMSPLV 132 (276)
T ss_pred cc-----cceEEEecccc
Confidence 86 89999998754
No 9
>PLN02965 Probable pheophorbidase
Probab=99.58 E-value=9e-15 Score=123.31 Aligned_cols=85 Identities=20% Similarity=0.284 Sum_probs=69.3
Q ss_pred HHHHHHHHHhCCc-ccCCCcCcCCCCCCCCC--CcchHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCCh
Q psy4395 87 FSYIAAALVGLGY-QRDLSMRGAPYDFRKAP--NENQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSS 163 (283)
Q Consensus 87 ~~~l~~~L~~~g~-~~~~d~~g~g~~~r~~~--~~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~~ 163 (283)
|..+++.|++.|| ++++|+||||.|..... .+.+.+++++.++|+.+.. .++++||||||||.++..++..+|+
T Consensus 19 w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~---~~~~~lvGhSmGG~ia~~~a~~~p~ 95 (255)
T PLN02965 19 WYKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLPP---DHKVILVGHSIGGGSVTEALCKFTD 95 (255)
T ss_pred HHHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcCC---CCCEEEEecCcchHHHHHHHHhCch
Confidence 6688899988899 99999999998754322 3467777888888876531 2489999999999999999999998
Q ss_pred hHHhhhhcceEEecCC
Q psy4395 164 AWKSKFVRSLVSLAAP 179 (283)
Q Consensus 164 ~~~~~~v~~~i~i~~p 179 (283)
. |+++|++++.
T Consensus 96 ~-----v~~lvl~~~~ 106 (255)
T PLN02965 96 K-----ISMAIYVAAA 106 (255)
T ss_pred h-----eeEEEEEccc
Confidence 7 9999998764
No 10
>KOG4409|consensus
Probab=99.57 E-value=8.8e-15 Score=123.53 Aligned_cols=84 Identities=17% Similarity=0.118 Sum_probs=67.0
Q ss_pred HHHHHHHhCCc-ccCCCcCcCCCCCCCCCCc-chHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCChhHH
Q psy4395 89 YIAAALVGLGY-QRDLSMRGAPYDFRKAPNE-NQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSSAWK 166 (283)
Q Consensus 89 ~l~~~L~~~g~-~~~~d~~g~g~~~r~~~~~-~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~~~~~ 166 (283)
.-.+.|++ .. ++++|++|+|.|.|..... ...-.....+.||+.+...+-.+.+|+||||||.++..||..+|++
T Consensus 108 ~Nf~~La~-~~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlKyPer-- 184 (365)
T KOG4409|consen 108 RNFDDLAK-IRNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESIEQWRKKMGLEKMILVGHSFGGYLAAKYALKYPER-- 184 (365)
T ss_pred Hhhhhhhh-cCceEEecccCCCCCCCCCCCCCcccchHHHHHHHHHHHHHcCCcceeEeeccchHHHHHHHHHhChHh--
Confidence 44455666 45 8999999999988865432 2222235677888888888888999999999999999999999998
Q ss_pred hhhhcceEEecC
Q psy4395 167 SKFVRSLVSLAA 178 (283)
Q Consensus 167 ~~~v~~~i~i~~ 178 (283)
|+.+|++++
T Consensus 185 ---V~kLiLvsP 193 (365)
T KOG4409|consen 185 ---VEKLILVSP 193 (365)
T ss_pred ---hceEEEecc
Confidence 999998865
No 11
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.57 E-value=1.7e-14 Score=126.27 Aligned_cols=89 Identities=18% Similarity=0.204 Sum_probs=72.4
Q ss_pred HHHHHHHHHhCCc-ccCCCcCcCCCCCCCC--CCcchHHHHHHHHHHHHHHHH--cCCCCEEEEEeCcccHHHHHHHHcC
Q psy4395 87 FSYIAAALVGLGY-QRDLSMRGAPYDFRKA--PNENQEYFANFKALIEETYDL--NGGTPVVLVAHSMGSLMCLYFLQRQ 161 (283)
Q Consensus 87 ~~~l~~~L~~~g~-~~~~d~~g~g~~~r~~--~~~~~~~~~~l~~~i~~~~~~--~~~~~v~lvgHSmGg~va~~~~~~~ 161 (283)
|..++..|.++|| |+++|+||||.+.+.. ..+.+.+.+|+.++++.+... ..+.+++|+||||||.+++.++..+
T Consensus 76 ~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~ 155 (330)
T PLN02298 76 FQSTAIFLAQMGFACFALDLEGHGRSEGLRAYVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLAN 155 (330)
T ss_pred hhHHHHHHHhCCCEEEEecCCCCCCCCCccccCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcC
Confidence 4467788999999 9999999999875322 125677889999999988764 2345899999999999999999999
Q ss_pred ChhHHhhhhcceEEecCCC
Q psy4395 162 SSAWKSKFVRSLVSLAAPW 180 (283)
Q Consensus 162 ~~~~~~~~v~~~i~i~~p~ 180 (283)
|+. |+++|+++++.
T Consensus 156 p~~-----v~~lvl~~~~~ 169 (330)
T PLN02298 156 PEG-----FDGAVLVAPMC 169 (330)
T ss_pred ccc-----ceeEEEecccc
Confidence 986 99999997654
No 12
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.56 E-value=9.8e-15 Score=124.50 Aligned_cols=84 Identities=12% Similarity=0.012 Sum_probs=65.9
Q ss_pred HHHHHHHHHhCCc-ccCCCcCcCCCCCCCC-CCcchHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCChh
Q psy4395 87 FSYIAAALVGLGY-QRDLSMRGAPYDFRKA-PNENQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSSA 164 (283)
Q Consensus 87 ~~~l~~~L~~~g~-~~~~d~~g~g~~~r~~-~~~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~~~ 164 (283)
|..+++.|.+ +| ++++|++|||.+.... ..+.+.+.+++.++|+.+. ..+++||||||||.+++.++..+|+.
T Consensus 41 w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~i~~l~----~~~~~LvG~S~GG~va~~~a~~~p~~ 115 (276)
T TIGR02240 41 VFPFIEALDP-DLEVIAFDVPGVGGSSTPRHPYRFPGLAKLAARMLDYLD----YGQVNAIGVSWGGALAQQFAHDYPER 115 (276)
T ss_pred HHHHHHHhcc-CceEEEECCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhC----cCceEEEEECHHHHHHHHHHHHCHHH
Confidence 4567777865 46 9999999999875432 1245666777777776653 35899999999999999999999987
Q ss_pred HHhhhhcceEEecCCC
Q psy4395 165 WKSKFVRSLVSLAAPW 180 (283)
Q Consensus 165 ~~~~~v~~~i~i~~p~ 180 (283)
|+++|+++++.
T Consensus 116 -----v~~lvl~~~~~ 126 (276)
T TIGR02240 116 -----CKKLILAATAA 126 (276)
T ss_pred -----hhheEEeccCC
Confidence 99999998764
No 13
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.56 E-value=1.3e-14 Score=124.83 Aligned_cols=85 Identities=12% Similarity=0.176 Sum_probs=68.6
Q ss_pred HHHHHHHHHhCCcccCCCcCcCCCCCCCC--------CCcchHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHH
Q psy4395 87 FSYIAAALVGLGYQRDLSMRGAPYDFRKA--------PNENQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFL 158 (283)
Q Consensus 87 ~~~l~~~L~~~g~~~~~d~~g~g~~~r~~--------~~~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~ 158 (283)
|..++..|.+.+.++++|++|||.+.+.. ..+.+++++++.++|+.+. ..+++||||||||.++..++
T Consensus 45 w~~~~~~L~~~~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l~----~~~~~lvGhS~Gg~va~~~a 120 (294)
T PLN02824 45 WRKNTPVLAKSHRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDVV----GDPAFVICNSVGGVVGLQAA 120 (294)
T ss_pred HHHHHHHHHhCCeEEEEcCCCCCCCCCCccccccccccCCHHHHHHHHHHHHHHhc----CCCeEEEEeCHHHHHHHHHH
Confidence 55778888877559999999999876542 1246677777877777653 35899999999999999999
Q ss_pred HcCChhHHhhhhcceEEecCCC
Q psy4395 159 QRQSSAWKSKFVRSLVSLAAPW 180 (283)
Q Consensus 159 ~~~~~~~~~~~v~~~i~i~~p~ 180 (283)
..+|+. |+++|+++++.
T Consensus 121 ~~~p~~-----v~~lili~~~~ 137 (294)
T PLN02824 121 VDAPEL-----VRGVMLINISL 137 (294)
T ss_pred HhChhh-----eeEEEEECCCc
Confidence 999987 99999998754
No 14
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.56 E-value=2.3e-14 Score=122.08 Aligned_cols=84 Identities=23% Similarity=0.263 Sum_probs=65.8
Q ss_pred HHHHHHHHHhCCc-ccCCCcCcCCCCCCCC--CCcchHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCCh
Q psy4395 87 FSYIAAALVGLGY-QRDLSMRGAPYDFRKA--PNENQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSS 163 (283)
Q Consensus 87 ~~~l~~~L~~~g~-~~~~d~~g~g~~~r~~--~~~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~~ 163 (283)
|..++..|++.|| ++++|++|||.+.... ..+++++.+++.++|+.+. ...+++||||||||+++..++..+|+
T Consensus 34 w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i~~l~---~~~~v~lvGhS~GG~v~~~~a~~~p~ 110 (273)
T PLN02211 34 WYKIRCLMENSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDFLSSLP---ENEKVILVGHSAGGLSVTQAIHRFPK 110 (273)
T ss_pred HHHHHHHHHhCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHHHHhcC---CCCCEEEEEECchHHHHHHHHHhChh
Confidence 6688899998899 9999999999753222 1356666666666666542 23599999999999999999998888
Q ss_pred hHHhhhhcceEEecC
Q psy4395 164 AWKSKFVRSLVSLAA 178 (283)
Q Consensus 164 ~~~~~~v~~~i~i~~ 178 (283)
. |+++|++++
T Consensus 111 ~-----v~~lv~~~~ 120 (273)
T PLN02211 111 K-----ICLAVYVAA 120 (273)
T ss_pred h-----eeEEEEecc
Confidence 6 999999965
No 15
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.54 E-value=3.7e-14 Score=122.52 Aligned_cols=84 Identities=15% Similarity=0.141 Sum_probs=67.1
Q ss_pred HHHHHHHHHhCCc-ccCCCcCcCCCCCCCCC---CcchHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCC
Q psy4395 87 FSYIAAALVGLGY-QRDLSMRGAPYDFRKAP---NENQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQS 162 (283)
Q Consensus 87 ~~~l~~~L~~~g~-~~~~d~~g~g~~~r~~~---~~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~ 162 (283)
|..+++.|.+.|| ++++|+||||.+.+... .+.+.+++++.++++.+ +..+++|+||||||.++..++..+|
T Consensus 62 w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l~~l----~~~~v~lvGhS~Gg~ia~~~a~~~p 137 (302)
T PRK00870 62 YRKMIPILAAAGHRVIAPDLIGFGRSDKPTRREDYTYARHVEWMRSWFEQL----DLTDVTLVCQDWGGLIGLRLAAEHP 137 (302)
T ss_pred HHHHHHHHHhCCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHc----CCCCEEEEEEChHHHHHHHHHHhCh
Confidence 6688899988899 99999999998754321 23566666776666654 3458999999999999999999999
Q ss_pred hhHHhhhhcceEEecCC
Q psy4395 163 SAWKSKFVRSLVSLAAP 179 (283)
Q Consensus 163 ~~~~~~~v~~~i~i~~p 179 (283)
+. |.++|++++.
T Consensus 138 ~~-----v~~lvl~~~~ 149 (302)
T PRK00870 138 DR-----FARLVVANTG 149 (302)
T ss_pred hh-----eeEEEEeCCC
Confidence 87 9999999753
No 16
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.54 E-value=2.3e-14 Score=123.36 Aligned_cols=84 Identities=21% Similarity=0.206 Sum_probs=68.9
Q ss_pred HHHHHHHHHhCCcccCCCcCcCCCCCCCCC-CcchHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCChhH
Q psy4395 87 FSYIAAALVGLGYQRDLSMRGAPYDFRKAP-NENQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSSAW 165 (283)
Q Consensus 87 ~~~l~~~L~~~g~~~~~d~~g~g~~~r~~~-~~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~~~~ 165 (283)
|+.+++.|.+.+.++++|++|||.|.+... .+...+++++.++++.+. ..+++++||||||.++..++..+|+.
T Consensus 43 w~~~~~~L~~~~~via~D~~G~G~S~~~~~~~~~~~~a~dl~~ll~~l~----~~~~~lvGhS~Gg~ia~~~a~~~p~~- 117 (295)
T PRK03592 43 WRNIIPHLAGLGRCLAPDLIGMGASDKPDIDYTFADHARYLDAWFDALG----LDDVVLVGHDWGSALGFDWAARHPDR- 117 (295)
T ss_pred HHHHHHHHhhCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC----CCCeEEEEECHHHHHHHHHHHhChhh-
Confidence 567888898876699999999998865432 256777778877777653 35899999999999999999999987
Q ss_pred HhhhhcceEEecCC
Q psy4395 166 KSKFVRSLVSLAAP 179 (283)
Q Consensus 166 ~~~~v~~~i~i~~p 179 (283)
|+++|+++++
T Consensus 118 ----v~~lil~~~~ 127 (295)
T PRK03592 118 ----VRGIAFMEAI 127 (295)
T ss_pred ----eeEEEEECCC
Confidence 9999999864
No 17
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.52 E-value=7.7e-14 Score=114.92 Aligned_cols=66 Identities=26% Similarity=0.312 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHHc-----CCCCEEEEEeCcccHHHHHHHHcCChhHHhhhhcceEEecCCCCcchhhHHHHh
Q psy4395 124 ANFKALIEETYDLN-----GGTPVVLVAHSMGSLMCLYFLQRQSSAWKSKFVRSLVSLAAPWGGSVKAVKVFA 191 (283)
Q Consensus 124 ~~l~~~i~~~~~~~-----~~~~v~lvgHSmGg~va~~~~~~~~~~~~~~~v~~~i~i~~p~~g~~~~~~~~~ 191 (283)
+.+...|+.+.+.+ +.++|+||||||||++++.++...+.. ...|+.+|++++|+.|++.+.....
T Consensus 64 ~~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~--~~~v~~iitl~tPh~g~~~~~d~~~ 134 (225)
T PF07819_consen 64 EFLAEAIKYILELYKSNRPPPRSVILVGHSMGGLVARSALSLPNYD--PDSVKTIITLGTPHRGSPLAFDRSL 134 (225)
T ss_pred HHHHHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHhccccc--cccEEEEEEEcCCCCCccccchHHH
Confidence 34444555554443 667999999999999999998765422 2349999999999999987655333
No 18
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.52 E-value=8.1e-14 Score=117.27 Aligned_cols=91 Identities=18% Similarity=0.189 Sum_probs=73.6
Q ss_pred HHHHHHHHHhCCc-ccCCCcCcCCCCCCC-CCCcchHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCChh
Q psy4395 87 FSYIAAALVGLGY-QRDLSMRGAPYDFRK-APNENQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSSA 164 (283)
Q Consensus 87 ~~~l~~~L~~~g~-~~~~d~~g~g~~~r~-~~~~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~~~ 164 (283)
|..+++.|++.|| ++.+|++|||.+... ....+..+.+|+..+++.+.+. +..+++|+||||||.++..++..+|+.
T Consensus 45 ~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~~~~~~~~~Dv~~ai~~L~~~-~~~~v~LvG~SmGG~vAl~~A~~~p~~ 123 (266)
T TIGR03101 45 VALQARAFAAGGFGVLQIDLYGCGDSAGDFAAARWDVWKEDVAAAYRWLIEQ-GHPPVTLWGLRLGALLALDAANPLAAK 123 (266)
T ss_pred HHHHHHHHHHCCCEEEEECCCCCCCCCCccccCCHHHHHHHHHHHHHHHHhc-CCCCEEEEEECHHHHHHHHHHHhCccc
Confidence 5678899999999 899999999976422 2234667788888888887664 456999999999999999999998876
Q ss_pred HHhhhhcceEEecCCCCcc
Q psy4395 165 WKSKFVRSLVSLAAPWGGS 183 (283)
Q Consensus 165 ~~~~~v~~~i~i~~p~~g~ 183 (283)
++++|++++...|.
T Consensus 124 -----v~~lVL~~P~~~g~ 137 (266)
T TIGR03101 124 -----CNRLVLWQPVVSGK 137 (266)
T ss_pred -----cceEEEeccccchH
Confidence 89999998765553
No 19
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.52 E-value=3.2e-14 Score=118.66 Aligned_cols=83 Identities=13% Similarity=0.153 Sum_probs=63.3
Q ss_pred HHHHHHHHHhCCc-ccCCCcCcCCCCCCCCCCcchHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCChhH
Q psy4395 87 FSYIAAALVGLGY-QRDLSMRGAPYDFRKAPNENQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSSAW 165 (283)
Q Consensus 87 ~~~l~~~L~~~g~-~~~~d~~g~g~~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~~~~ 165 (283)
|..+++.|. +| ++++|+||||.+.+....+.+.+.+++.++++.. +..++++|||||||.++..++..+|+.
T Consensus 18 w~~~~~~l~--~~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~~----~~~~~~lvG~S~Gg~va~~~a~~~~~~- 90 (242)
T PRK11126 18 WQPVGEALP--DYPRLYIDLPGHGGSAAISVDGFADVSRLLSQTLQSY----NILPYWLVGYSLGGRIAMYYACQGLAG- 90 (242)
T ss_pred HHHHHHHcC--CCCEEEecCCCCCCCCCccccCHHHHHHHHHHHHHHc----CCCCeEEEEECHHHHHHHHHHHhCCcc-
Confidence 556777773 68 8999999999875544345666666777666653 456999999999999999999988642
Q ss_pred HhhhhcceEEecCC
Q psy4395 166 KSKFVRSLVSLAAP 179 (283)
Q Consensus 166 ~~~~v~~~i~i~~p 179 (283)
.|+++|+++++
T Consensus 91 ---~v~~lvl~~~~ 101 (242)
T PRK11126 91 ---GLCGLIVEGGN 101 (242)
T ss_pred ---cccEEEEeCCC
Confidence 28999988654
No 20
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.50 E-value=6.5e-14 Score=117.66 Aligned_cols=82 Identities=15% Similarity=0.185 Sum_probs=65.2
Q ss_pred HHHHHHHHHhCCc-ccCCCcCcCCCCCCCCCCcchHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCChhH
Q psy4395 87 FSYIAAALVGLGY-QRDLSMRGAPYDFRKAPNENQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSSAW 165 (283)
Q Consensus 87 ~~~l~~~L~~~g~-~~~~d~~g~g~~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~~~~ 165 (283)
|..++..|.+ +| ++++|+||||.+-.....+..++.+++.++|+.+ +..+++|+||||||.++..++..+|+.
T Consensus 32 ~~~~~~~l~~-~~~vi~~D~~G~G~s~~~~~~~~~~~~~d~~~~l~~l----~~~~~~lvGhS~Gg~va~~~a~~~~~~- 105 (255)
T PRK10673 32 LGVLARDLVN-DHDIIQVDMRNHGLSPRDPVMNYPAMAQDLLDTLDAL----QIEKATFIGHSMGGKAVMALTALAPDR- 105 (255)
T ss_pred HHHHHHHHhh-CCeEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHc----CCCceEEEEECHHHHHHHHHHHhCHhh-
Confidence 4467777865 57 9999999999775544345677778888877765 334899999999999999999999887
Q ss_pred HhhhhcceEEecC
Q psy4395 166 KSKFVRSLVSLAA 178 (283)
Q Consensus 166 ~~~~v~~~i~i~~ 178 (283)
|+++|++++
T Consensus 106 ----v~~lvli~~ 114 (255)
T PRK10673 106 ----IDKLVAIDI 114 (255)
T ss_pred ----cceEEEEec
Confidence 999999854
No 21
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.48 E-value=6.3e-14 Score=114.35 Aligned_cols=85 Identities=27% Similarity=0.404 Sum_probs=68.1
Q ss_pred HHHHHHHHHhCCc-ccCCCcCcCCCCCCCC---CCcchHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCC
Q psy4395 87 FSYIAAALVGLGY-QRDLSMRGAPYDFRKA---PNENQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQS 162 (283)
Q Consensus 87 ~~~l~~~L~~~g~-~~~~d~~g~g~~~r~~---~~~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~ 162 (283)
|..+++.|+ .|| ++++|++|+|.+.... ..+..++++++.++++.+. ..+++++||||||.+++.++..+|
T Consensus 14 ~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~----~~~~~lvG~S~Gg~~a~~~a~~~p 88 (228)
T PF12697_consen 14 WDPLAEALA-RGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALG----IKKVILVGHSMGGMIALRLAARYP 88 (228)
T ss_dssp GHHHHHHHH-TTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTT----TSSEEEEEETHHHHHHHHHHHHSG
T ss_pred HHHHHHHHh-CCCEEEEEecCCccccccccccCCcchhhhhhhhhhcccccc----cccccccccccccccccccccccc
Confidence 557888885 799 8999999999876533 2345666777777766654 359999999999999999999999
Q ss_pred hhHHhhhhcceEEecCCCC
Q psy4395 163 SAWKSKFVRSLVSLAAPWG 181 (283)
Q Consensus 163 ~~~~~~~v~~~i~i~~p~~ 181 (283)
+. |+++|+++++..
T Consensus 89 ~~-----v~~~vl~~~~~~ 102 (228)
T PF12697_consen 89 DR-----VKGLVLLSPPPP 102 (228)
T ss_dssp GG-----EEEEEEESESSS
T ss_pred cc-----cccceeeccccc
Confidence 86 999999988764
No 22
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.48 E-value=1.9e-13 Score=115.09 Aligned_cols=79 Identities=13% Similarity=0.168 Sum_probs=58.1
Q ss_pred HHHHHHHHHhCCc-ccCCCcCcCCCCCCCCCCcchHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCChhH
Q psy4395 87 FSYIAAALVGLGY-QRDLSMRGAPYDFRKAPNENQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSSAW 165 (283)
Q Consensus 87 ~~~l~~~L~~~g~-~~~~d~~g~g~~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~~~~ 165 (283)
|..+++.|.+. | ++++|++|||.+.+....+.++.+++ +. + ...+++++|||||||.++..++..+|+.
T Consensus 29 w~~~~~~L~~~-~~vi~~Dl~G~G~S~~~~~~~~~~~~~~----l~---~-~~~~~~~lvGhS~Gg~ia~~~a~~~p~~- 98 (256)
T PRK10349 29 WRCIDEELSSH-FTLHLVDLPGFGRSRGFGALSLADMAEA----VL---Q-QAPDKAIWLGWSLGGLVASQIALTHPER- 98 (256)
T ss_pred HHHHHHHHhcC-CEEEEecCCCCCCCCCCCCCCHHHHHHH----HH---h-cCCCCeEEEEECHHHHHHHHHHHhChHh-
Confidence 56788888765 7 99999999997754332233322222 22 2 2345899999999999999999999987
Q ss_pred HhhhhcceEEecCC
Q psy4395 166 KSKFVRSLVSLAAP 179 (283)
Q Consensus 166 ~~~~v~~~i~i~~p 179 (283)
|+++|+++++
T Consensus 99 ----v~~lili~~~ 108 (256)
T PRK10349 99 ----VQALVTVASS 108 (256)
T ss_pred ----hheEEEecCc
Confidence 9999998763
No 23
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.47 E-value=3.1e-13 Score=111.83 Aligned_cols=87 Identities=17% Similarity=0.242 Sum_probs=62.0
Q ss_pred HHHHHHHHHhCCc-ccCCCcCcCCCCCCCCCCcchHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCChhH
Q psy4395 87 FSYIAAALVGLGY-QRDLSMRGAPYDFRKAPNENQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSSAW 165 (283)
Q Consensus 87 ~~~l~~~L~~~g~-~~~~d~~g~g~~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~~~~ 165 (283)
|..+++.|+ .|| ++++|++|+|.+..........+.+.+..++..+.+..+..+++++||||||.++..++..+|+.
T Consensus 17 ~~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia~~~a~~~~~~- 94 (251)
T TIGR03695 17 WQALIELLG-PHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQLGIEPFFLVGYSMGGRIALYYALQYPER- 94 (251)
T ss_pred HHHHHHHhc-ccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHcCCCeEEEEEeccHHHHHHHHHHhCchh-
Confidence 557888888 789 99999999997743221111222222222244444444556999999999999999999999986
Q ss_pred HhhhhcceEEecCC
Q psy4395 166 KSKFVRSLVSLAAP 179 (283)
Q Consensus 166 ~~~~v~~~i~i~~p 179 (283)
|.++|++++.
T Consensus 95 ----v~~lil~~~~ 104 (251)
T TIGR03695 95 ----VQGLILESGS 104 (251)
T ss_pred ----eeeeEEecCC
Confidence 9999988654
No 24
>PLN02511 hydrolase
Probab=99.45 E-value=4.1e-13 Score=119.88 Aligned_cols=93 Identities=13% Similarity=0.232 Sum_probs=74.1
Q ss_pred hHHHHHHHHHhCCc-ccCCCcCcCCCCCCCCCC-cchHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCCh
Q psy4395 86 YFSYIAAALVGLGY-QRDLSMRGAPYDFRKAPN-ENQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSS 163 (283)
Q Consensus 86 ~~~~l~~~L~~~g~-~~~~d~~g~g~~~r~~~~-~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~~ 163 (283)
|+..++..+.+.|| ++++|+||||.+-...+. ....+.+|+.++|+.+..+++..+++++||||||.+++.++.++++
T Consensus 117 y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~ 196 (388)
T PLN02511 117 YVRHMLLRARSKGWRVVVFNSRGCADSPVTTPQFYSASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGE 196 (388)
T ss_pred HHHHHHHHHHHCCCEEEEEecCCCCCCCCCCcCEEcCCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCC
Confidence 34567777788999 899999999976433222 2346678999999999988887799999999999999999998886
Q ss_pred hHHhhhhcceEEecCCCC
Q psy4395 164 AWKSKFVRSLVSLAAPWG 181 (283)
Q Consensus 164 ~~~~~~v~~~i~i~~p~~ 181 (283)
. ..|.+.+++++|+.
T Consensus 197 ~---~~v~~~v~is~p~~ 211 (388)
T PLN02511 197 N---CPLSGAVSLCNPFD 211 (388)
T ss_pred C---CCceEEEEECCCcC
Confidence 3 13788888888863
No 25
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.45 E-value=4e-13 Score=119.78 Aligned_cols=90 Identities=18% Similarity=0.173 Sum_probs=70.6
Q ss_pred HHHHHHHHHhCCc-ccCCCcCcCCCCCCCC--CCcchHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCCh
Q psy4395 87 FSYIAAALVGLGY-QRDLSMRGAPYDFRKA--PNENQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSS 163 (283)
Q Consensus 87 ~~~l~~~L~~~g~-~~~~d~~g~g~~~r~~--~~~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~~ 163 (283)
|..+++.|++.|| ++++|++|||.+.+.. ..+.+.+.+|+.++++.+..+++..+++++||||||++++.++. +|+
T Consensus 152 ~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~ 230 (395)
T PLN02652 152 YLHFAKQLTSCGFGVYAMDWIGHGGSDGLHGYVPSLDYVVEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPS 230 (395)
T ss_pred HHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccC
Confidence 5688999999999 8999999999765432 12466778899999999987776678999999999999998775 443
Q ss_pred hHHhhhhcceEEecCC
Q psy4395 164 AWKSKFVRSLVSLAAP 179 (283)
Q Consensus 164 ~~~~~~v~~~i~i~~p 179 (283)
. ...|.++|+.++.
T Consensus 231 ~--~~~v~glVL~sP~ 244 (395)
T PLN02652 231 I--EDKLEGIVLTSPA 244 (395)
T ss_pred c--ccccceEEEECcc
Confidence 1 1128899987654
No 26
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.45 E-value=2.7e-13 Score=119.96 Aligned_cols=83 Identities=22% Similarity=0.293 Sum_probs=64.0
Q ss_pred HHHHHHHHHhCCc-ccCCCcCcCCCCCCCCC--CcchHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHH-cCC
Q psy4395 87 FSYIAAALVGLGY-QRDLSMRGAPYDFRKAP--NENQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQ-RQS 162 (283)
Q Consensus 87 ~~~l~~~L~~~g~-~~~~d~~g~g~~~r~~~--~~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~-~~~ 162 (283)
|..++..|.+ +| ++++|++|||.+.+... .+...+.+++.++++.+ +..+++||||||||.++..++. .+|
T Consensus 104 w~~~~~~L~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l~~~l~~l----~~~~~~lvGhS~Gg~ia~~~a~~~~P 178 (360)
T PLN02679 104 WRRNIGVLAK-NYTVYAIDLLGFGASDKPPGFSYTMETWAELILDFLEEV----VQKPTVLIGNSVGSLACVIAASESTR 178 (360)
T ss_pred HHHHHHHHhc-CCEEEEECCCCCCCCCCCCCccccHHHHHHHHHHHHHHh----cCCCeEEEEECHHHHHHHHHHHhcCh
Confidence 5577788876 68 99999999998755321 24566677777777654 3459999999999999998876 468
Q ss_pred hhHHhhhhcceEEecCC
Q psy4395 163 SAWKSKFVRSLVSLAAP 179 (283)
Q Consensus 163 ~~~~~~~v~~~i~i~~p 179 (283)
+. |+++|+++++
T Consensus 179 ~r-----V~~LVLi~~~ 190 (360)
T PLN02679 179 DL-----VRGLVLLNCA 190 (360)
T ss_pred hh-----cCEEEEECCc
Confidence 86 9999999865
No 27
>KOG1455|consensus
Probab=99.43 E-value=5.8e-13 Score=110.61 Aligned_cols=91 Identities=14% Similarity=0.146 Sum_probs=75.2
Q ss_pred ccchHHHHHHHHHhCCc-ccCCCcCcCCCCCCC--CCCcchHHHHHHHHHHHHHH--HHcCCCCEEEEEeCcccHHHHHH
Q psy4395 83 VGSYFSYIAAALVGLGY-QRDLSMRGAPYDFRK--APNENQEYFANFKALIEETY--DLNGGTPVVLVAHSMGSLMCLYF 157 (283)
Q Consensus 83 ~~~~~~~l~~~L~~~g~-~~~~d~~g~g~~~r~--~~~~~~~~~~~l~~~i~~~~--~~~~~~~v~lvgHSmGg~va~~~ 157 (283)
.+..|..++..|+..|| |+++|++|||.+... -..+.+..++|+....+.+. .++.+.|..|.||||||+|++.+
T Consensus 67 ~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~ 146 (313)
T KOG1455|consen 67 SSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHAYVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLI 146 (313)
T ss_pred chhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcccCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHH
Confidence 34568899999999999 999999999976532 23468888899999999754 44677899999999999999999
Q ss_pred HHcCChhHHhhhhcceEEecC
Q psy4395 158 LQRQSSAWKSKFVRSLVSLAA 178 (283)
Q Consensus 158 ~~~~~~~~~~~~v~~~i~i~~ 178 (283)
+.+.|.. .+++|++++
T Consensus 147 ~~k~p~~-----w~G~ilvaP 162 (313)
T KOG1455|consen 147 ALKDPNF-----WDGAILVAP 162 (313)
T ss_pred HhhCCcc-----cccceeeec
Confidence 9999987 478887755
No 28
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.43 E-value=6.2e-13 Score=113.43 Aligned_cols=83 Identities=17% Similarity=0.110 Sum_probs=61.5
Q ss_pred HHHHHHHhCCc-ccCCCcCcCCCCCCCCCC--cchHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCChhH
Q psy4395 89 YIAAALVGLGY-QRDLSMRGAPYDFRKAPN--ENQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSSAW 165 (283)
Q Consensus 89 ~l~~~L~~~g~-~~~~d~~g~g~~~r~~~~--~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~~~~ 165 (283)
..+..|.+.|| ++++|+||||.|...... ....+.+++.++++.+ +.++++++||||||.+++.++..+|+.
T Consensus 51 ~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l----~~~~~~lvG~S~Gg~ia~~~a~~~p~~- 125 (282)
T TIGR03343 51 RNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDAL----DIEKAHLVGNSMGGATALNFALEYPDR- 125 (282)
T ss_pred HHHHHHHhCCCEEEEECCCCCCCCCCCcCcccccchhHHHHHHHHHHc----CCCCeeEEEECchHHHHHHHHHhChHh-
Confidence 33456667789 999999999987543211 1112455666665554 445899999999999999999999987
Q ss_pred HhhhhcceEEecCCC
Q psy4395 166 KSKFVRSLVSLAAPW 180 (283)
Q Consensus 166 ~~~~v~~~i~i~~p~ 180 (283)
|+++|+++++.
T Consensus 126 ----v~~lvl~~~~~ 136 (282)
T TIGR03343 126 ----IGKLILMGPGG 136 (282)
T ss_pred ----hceEEEECCCC
Confidence 99999998753
No 29
>PLN02578 hydrolase
Probab=99.43 E-value=4.3e-13 Score=118.48 Aligned_cols=83 Identities=18% Similarity=0.254 Sum_probs=64.8
Q ss_pred HHHHHHHHHhCCc-ccCCCcCcCCCCCCCCC-CcchHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCChh
Q psy4395 87 FSYIAAALVGLGY-QRDLSMRGAPYDFRKAP-NENQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSSA 164 (283)
Q Consensus 87 ~~~l~~~L~~~g~-~~~~d~~g~g~~~r~~~-~~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~~~ 164 (283)
|..++..|.+ +| ++++|++|||.+.+... .+...+.+++.++++.+. .++++++||||||.+++.++..+|+.
T Consensus 102 w~~~~~~l~~-~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~l~~~i~~~~----~~~~~lvG~S~Gg~ia~~~A~~~p~~ 176 (354)
T PLN02578 102 WRYNIPELAK-KYKVYALDLLGFGWSDKALIEYDAMVWRDQVADFVKEVV----KEPAVLVGNSLGGFTALSTAVGYPEL 176 (354)
T ss_pred HHHHHHHHhc-CCEEEEECCCCCCCCCCcccccCHHHHHHHHHHHHHHhc----cCCeEEEEECHHHHHHHHHHHhChHh
Confidence 5566777865 57 99999999997654322 245556677777777664 35899999999999999999999987
Q ss_pred HHhhhhcceEEecCC
Q psy4395 165 WKSKFVRSLVSLAAP 179 (283)
Q Consensus 165 ~~~~~v~~~i~i~~p 179 (283)
|+++|+++++
T Consensus 177 -----v~~lvLv~~~ 186 (354)
T PLN02578 177 -----VAGVALLNSA 186 (354)
T ss_pred -----cceEEEECCC
Confidence 9999998653
No 30
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.42 E-value=9.9e-13 Score=111.57 Aligned_cols=84 Identities=13% Similarity=0.157 Sum_probs=61.2
Q ss_pred HHHHHHHHHhCCc-ccCCCcCcCCCCCCCCC----CcchHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcC
Q psy4395 87 FSYIAAALVGLGY-QRDLSMRGAPYDFRKAP----NENQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQ 161 (283)
Q Consensus 87 ~~~l~~~L~~~g~-~~~~d~~g~g~~~r~~~----~~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~ 161 (283)
|..+...|.+.|| ++++|+||||.+.+... .+.+.+.+++.++++. .+..+++++||||||.++..++..+
T Consensus 42 ~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~liG~S~Gg~ia~~~a~~~ 117 (288)
T TIGR01250 42 LENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDELEEVREK----LGLDKFYLLGHSWGGMLAQEYALKY 117 (288)
T ss_pred HHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHHHHHHHHHH----cCCCcEEEEEeehHHHHHHHHHHhC
Confidence 3355566666689 99999999997654321 2344555555555443 3445799999999999999999999
Q ss_pred ChhHHhhhhcceEEecCC
Q psy4395 162 SSAWKSKFVRSLVSLAAP 179 (283)
Q Consensus 162 ~~~~~~~~v~~~i~i~~p 179 (283)
|+. |+++|++++.
T Consensus 118 p~~-----v~~lvl~~~~ 130 (288)
T TIGR01250 118 GQH-----LKGLIISSML 130 (288)
T ss_pred ccc-----cceeeEeccc
Confidence 886 9999987653
No 31
>PRK10985 putative hydrolase; Provisional
Probab=99.42 E-value=1.2e-12 Score=114.32 Aligned_cols=95 Identities=17% Similarity=0.123 Sum_probs=71.1
Q ss_pred hHHHHHHHHHhCCc-ccCCCcCcCCCCC-CCCCCcchHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCCh
Q psy4395 86 YFSYIAAALVGLGY-QRDLSMRGAPYDF-RKAPNENQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSS 163 (283)
Q Consensus 86 ~~~~l~~~L~~~g~-~~~~d~~g~g~~~-r~~~~~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~~ 163 (283)
|+..++..|.++|| ++.+|+||+|.+- +..........+|+..+++.+.++.+..+++++||||||.++..++..+++
T Consensus 75 ~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~ 154 (324)
T PRK10985 75 YAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHRIYHSGETEDARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGD 154 (324)
T ss_pred HHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcceECCCchHHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCC
Confidence 45678899999999 8999999998431 111111223468888899988887777799999999999988888776543
Q ss_pred hHHhhhhcceEEecCCCCcc
Q psy4395 164 AWKSKFVRSLVSLAAPWGGS 183 (283)
Q Consensus 164 ~~~~~~v~~~i~i~~p~~g~ 183 (283)
. ..+.++|++++|+...
T Consensus 155 ~---~~~~~~v~i~~p~~~~ 171 (324)
T PRK10985 155 D---LPLDAAVIVSAPLMLE 171 (324)
T ss_pred C---CCccEEEEEcCCCCHH
Confidence 2 1278999999997643
No 32
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.41 E-value=1.4e-12 Score=118.31 Aligned_cols=77 Identities=23% Similarity=0.297 Sum_probs=58.0
Q ss_pred hCCc-ccCCCcCcCCCCCCCCC--CcchHHHHHHH-HHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCChhHHhhhhc
Q psy4395 96 GLGY-QRDLSMRGAPYDFRKAP--NENQEYFANFK-ALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSSAWKSKFVR 171 (283)
Q Consensus 96 ~~g~-~~~~d~~g~g~~~r~~~--~~~~~~~~~l~-~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~~~~~~~~v~ 171 (283)
+.+| ++++|++|||.+.+... .+.+++.+++. .+++ ..+..+++++||||||++++.++..+|+. |+
T Consensus 230 ~~~yrVia~Dl~G~G~S~~p~~~~ytl~~~a~~l~~~ll~----~lg~~k~~LVGhSmGG~iAl~~A~~~Pe~-----V~ 300 (481)
T PLN03087 230 KSTYRLFAVDLLGFGRSPKPADSLYTLREHLEMIERSVLE----RYKVKSFHIVAHSLGCILALALAVKHPGA-----VK 300 (481)
T ss_pred hCCCEEEEECCCCCCCCcCCCCCcCCHHHHHHHHHHHHHH----HcCCCCEEEEEECHHHHHHHHHHHhChHh-----cc
Confidence 4688 89999999998754321 23444555542 3333 34556999999999999999999999987 99
Q ss_pred ceEEecCCCC
Q psy4395 172 SLVSLAAPWG 181 (283)
Q Consensus 172 ~~i~i~~p~~ 181 (283)
++|++++|..
T Consensus 301 ~LVLi~~~~~ 310 (481)
T PLN03087 301 SLTLLAPPYY 310 (481)
T ss_pred EEEEECCCcc
Confidence 9999988753
No 33
>KOG1454|consensus
Probab=99.40 E-value=6.7e-13 Score=115.25 Aligned_cols=91 Identities=22% Similarity=0.224 Sum_probs=66.6
Q ss_pred HHHHHHHHHhC-Cc-ccCCCcCcCCCCCCCCCCcchHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCChh
Q psy4395 87 FSYIAAALVGL-GY-QRDLSMRGAPYDFRKAPNENQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSSA 164 (283)
Q Consensus 87 ~~~l~~~L~~~-g~-~~~~d~~g~g~~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~~~ 164 (283)
|+.++..|.+. |+ ++++|++|+||+...+.... ..+.+....|+....+....++++|||||||++|..+|..+|+.
T Consensus 74 w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~-y~~~~~v~~i~~~~~~~~~~~~~lvghS~Gg~va~~~Aa~~P~~ 152 (326)
T KOG1454|consen 74 WRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPL-YTLRELVELIRRFVKEVFVEPVSLVGHSLGGIVALKAAAYYPET 152 (326)
T ss_pred HhhhccccccccceEEEEEecCCCCcCCCCCCCCc-eehhHHHHHHHHHHHhhcCcceEEEEeCcHHHHHHHHHHhCccc
Confidence 44555555554 46 89999999996544333322 33455566666666666777999999999999999999999998
Q ss_pred HHhhhhcceE---EecCCCCcc
Q psy4395 165 WKSKFVRSLV---SLAAPWGGS 183 (283)
Q Consensus 165 ~~~~~v~~~i---~i~~p~~g~ 183 (283)
|+++| .++++....
T Consensus 153 -----V~~lv~~~~~~~~~~~~ 169 (326)
T KOG1454|consen 153 -----VDSLVLLDLLGPPVYST 169 (326)
T ss_pred -----ccceeeecccccccccC
Confidence 99999 666765543
No 34
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.40 E-value=8.6e-13 Score=117.04 Aligned_cols=86 Identities=19% Similarity=0.300 Sum_probs=69.7
Q ss_pred hHHHHHHHHHhCCc-ccCCCcCcCCCCCCCCC-----CcchHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHH
Q psy4395 86 YFSYIAAALVGLGY-QRDLSMRGAPYDFRKAP-----NENQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQ 159 (283)
Q Consensus 86 ~~~~l~~~L~~~g~-~~~~d~~g~g~~~r~~~-----~~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~ 159 (283)
.|+.++..|++ +| ++++|++|||.+.+... .+.+.+.+++.++++.+. ..+++|+||||||.+++.++.
T Consensus 142 ~w~~~~~~L~~-~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~l~----~~~~~LvG~s~GG~ia~~~a~ 216 (383)
T PLN03084 142 SYRKVLPVLSK-NYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLESLIDELK----SDKVSLVVQGYFSPPVVKYAS 216 (383)
T ss_pred HHHHHHHHHhc-CCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHHHHHHHhC----CCCceEEEECHHHHHHHHHHH
Confidence 37788888875 68 99999999998765432 246667777777777653 348999999999999999999
Q ss_pred cCChhHHhhhhcceEEecCCCC
Q psy4395 160 RQSSAWKSKFVRSLVSLAAPWG 181 (283)
Q Consensus 160 ~~~~~~~~~~v~~~i~i~~p~~ 181 (283)
.+|+. |.++|+++++..
T Consensus 217 ~~P~~-----v~~lILi~~~~~ 233 (383)
T PLN03084 217 AHPDK-----IKKLILLNPPLT 233 (383)
T ss_pred hChHh-----hcEEEEECCCCc
Confidence 99987 999999998753
No 35
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.40 E-value=1.1e-12 Score=111.40 Aligned_cols=84 Identities=15% Similarity=0.200 Sum_probs=63.9
Q ss_pred HHHHHHHHHhCCc-ccCCCcCcCCCCCCCCC--CcchHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCCh
Q psy4395 87 FSYIAAALVGLGY-QRDLSMRGAPYDFRKAP--NENQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSS 163 (283)
Q Consensus 87 ~~~l~~~L~~~g~-~~~~d~~g~g~~~r~~~--~~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~~ 163 (283)
|..+++.|++ +| ++++|++|||.+..... .+...+++++.++++.+ +.++++|+||||||.++..++..+|+
T Consensus 44 ~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~~----~~~~~~lvG~S~Gg~~a~~~a~~~p~ 118 (278)
T TIGR03056 44 WRDLMPPLAR-SFRVVAPDLPGHGFTRAPFRFRFTLPSMAEDLSALCAAE----GLSPDGVIGHSAGAAIALRLALDGPV 118 (278)
T ss_pred HHHHHHHHhh-CcEEEeecCCCCCCCCCccccCCCHHHHHHHHHHHHHHc----CCCCceEEEECccHHHHHHHHHhCCc
Confidence 4567777865 57 89999999998753322 24566667777666543 34589999999999999999999988
Q ss_pred hHHhhhhcceEEecCCC
Q psy4395 164 AWKSKFVRSLVSLAAPW 180 (283)
Q Consensus 164 ~~~~~~v~~~i~i~~p~ 180 (283)
. ++++|+++++.
T Consensus 119 ~-----v~~~v~~~~~~ 130 (278)
T TIGR03056 119 T-----PRMVVGINAAL 130 (278)
T ss_pred c-----cceEEEEcCcc
Confidence 6 88999887653
No 36
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.39 E-value=1.6e-12 Score=111.44 Aligned_cols=84 Identities=13% Similarity=0.091 Sum_probs=62.1
Q ss_pred HHHHHHHHHhCCc-ccCCCcCcCCCCCCCCC--CcchHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCCh
Q psy4395 87 FSYIAAALVGLGY-QRDLSMRGAPYDFRKAP--NENQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSS 163 (283)
Q Consensus 87 ~~~l~~~L~~~g~-~~~~d~~g~g~~~r~~~--~~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~~ 163 (283)
|+.+++.|.+ +| ++++|++|||.+.+... .+..++.+++.++++ ..+..+++++||||||.+++.++..+|+
T Consensus 50 ~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~lvG~S~Gg~va~~~a~~~p~ 124 (286)
T PRK03204 50 YRDIIVALRD-RFRCVAPDYLGFGLSERPSGFGYQIDEHARVIGEFVD----HLGLDRYLSMGQDWGGPISMAVAVERAD 124 (286)
T ss_pred HHHHHHHHhC-CcEEEEECCCCCCCCCCCCccccCHHHHHHHHHHHHH----HhCCCCEEEEEECccHHHHHHHHHhChh
Confidence 5677788865 58 89999999998754321 123444444444444 3455689999999999999999999998
Q ss_pred hHHhhhhcceEEecCCC
Q psy4395 164 AWKSKFVRSLVSLAAPW 180 (283)
Q Consensus 164 ~~~~~~v~~~i~i~~p~ 180 (283)
. |+++|+++++.
T Consensus 125 ~-----v~~lvl~~~~~ 136 (286)
T PRK03204 125 R-----VRGVVLGNTWF 136 (286)
T ss_pred h-----eeEEEEECccc
Confidence 7 99999887653
No 37
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.39 E-value=1.2e-12 Score=109.41 Aligned_cols=83 Identities=18% Similarity=0.188 Sum_probs=63.2
Q ss_pred HHHHHHHHHhCCc-ccCCCcCcCCCCCCCCC--CcchHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCCh
Q psy4395 87 FSYIAAALVGLGY-QRDLSMRGAPYDFRKAP--NENQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSS 163 (283)
Q Consensus 87 ~~~l~~~L~~~g~-~~~~d~~g~g~~~r~~~--~~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~~ 163 (283)
|..++..|.+ +| ++++|++|||.+.+... .+.+++.+++.++++.+ +..+++++||||||.++..++..+|+
T Consensus 29 ~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~----~~~~~~l~G~S~Gg~~a~~~a~~~~~ 103 (257)
T TIGR03611 29 WAPQLDVLTQ-RFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDAL----NIERFHFVGHALGGLIGLQLALRYPE 103 (257)
T ss_pred HHHHHHHHHh-ccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHh----CCCcEEEEEechhHHHHHHHHHHChH
Confidence 4456666764 68 89999999998754322 24666677777777654 33589999999999999999999888
Q ss_pred hHHhhhhcceEEecCC
Q psy4395 164 AWKSKFVRSLVSLAAP 179 (283)
Q Consensus 164 ~~~~~~v~~~i~i~~p 179 (283)
. |+++|++++.
T Consensus 104 ~-----v~~~i~~~~~ 114 (257)
T TIGR03611 104 R-----LLSLVLINAW 114 (257)
T ss_pred H-----hHHheeecCC
Confidence 6 9999988753
No 38
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.37 E-value=1e-12 Score=114.93 Aligned_cols=94 Identities=16% Similarity=0.157 Sum_probs=72.8
Q ss_pred HHHHHHHHHhCCc-ccCCCcCcCCCCCCCC-----CCcchHHHHHHHHHHHHHHH-------------------HcC-CC
Q psy4395 87 FSYIAAALVGLGY-QRDLSMRGAPYDFRKA-----PNENQEYFANFKALIEETYD-------------------LNG-GT 140 (283)
Q Consensus 87 ~~~l~~~L~~~g~-~~~~d~~g~g~~~r~~-----~~~~~~~~~~l~~~i~~~~~-------------------~~~-~~ 140 (283)
...+++.|.++|| |++.|+||||.+.+.. ..+++++++|+.++++.+.+ .++ +.
T Consensus 63 ~~~~~~~l~~~G~~V~~~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (332)
T TIGR01607 63 KDSWIENFNKNGYSVYGLDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRL 142 (332)
T ss_pred eHHHHHHHHHCCCcEEEecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCC
Confidence 3689999999999 9999999999765321 13578888999999998765 344 67
Q ss_pred CEEEEEeCcccHHHHHHHHcCCh--hHHhh-hhcceEEecCCC
Q psy4395 141 PVVLVAHSMGSLMCLYFLQRQSS--AWKSK-FVRSLVSLAAPW 180 (283)
Q Consensus 141 ~v~lvgHSmGg~va~~~~~~~~~--~~~~~-~v~~~i~i~~p~ 180 (283)
|++|+||||||++++.++..++. .|.++ .++++|++++++
T Consensus 143 p~~l~GhSmGg~i~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~ 185 (332)
T TIGR01607 143 PMYIIGLSMGGNIALRLLELLGKSNENNDKLNIKGCISLSGMI 185 (332)
T ss_pred ceeEeeccCccHHHHHHHHHhccccccccccccceEEEeccce
Confidence 99999999999999999876442 23332 588998887764
No 39
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.37 E-value=1.4e-12 Score=107.86 Aligned_cols=78 Identities=18% Similarity=0.264 Sum_probs=56.6
Q ss_pred HHHHHHHHHhCCc-ccCCCcCcCCCCCCCCCCcchHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCChhH
Q psy4395 87 FSYIAAALVGLGY-QRDLSMRGAPYDFRKAPNENQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSSAW 165 (283)
Q Consensus 87 ~~~l~~~L~~~g~-~~~~d~~g~g~~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~~~~ 165 (283)
|..+++.|.+ +| ++++|++|+|.+......+..++++++ .... ..+++++||||||.++..++..+|+.
T Consensus 20 ~~~~~~~l~~-~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~-------~~~~-~~~~~lvG~S~Gg~~a~~~a~~~p~~- 89 (245)
T TIGR01738 20 FRCLDEELSA-HFTLHLVDLPGHGRSRGFGPLSLADAAEAI-------AAQA-PDPAIWLGWSLGGLVALHIAATHPDR- 89 (245)
T ss_pred HHHHHHhhcc-CeEEEEecCCcCccCCCCCCcCHHHHHHHH-------HHhC-CCCeEEEEEcHHHHHHHHHHHHCHHh-
Confidence 5567777864 58 899999999986543322333333332 2222 24899999999999999999999987
Q ss_pred HhhhhcceEEecC
Q psy4395 166 KSKFVRSLVSLAA 178 (283)
Q Consensus 166 ~~~~v~~~i~i~~ 178 (283)
|.++|++++
T Consensus 90 ----v~~~il~~~ 98 (245)
T TIGR01738 90 ----VRALVTVAS 98 (245)
T ss_pred ----hheeeEecC
Confidence 899998854
No 40
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.37 E-value=4.2e-12 Score=100.74 Aligned_cols=88 Identities=15% Similarity=0.181 Sum_probs=71.1
Q ss_pred HHHHHHHHHhCCc-ccCCCcCcCCCCC-CCCCCcchHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCChh
Q psy4395 87 FSYIAAALVGLGY-QRDLSMRGAPYDF-RKAPNENQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSSA 164 (283)
Q Consensus 87 ~~~l~~~L~~~g~-~~~~d~~g~g~~~-r~~~~~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~~~ 164 (283)
.+.|.+.|.++|| ++++.++|||-.- ..-..+..+|.+++.+.-+.+.++ +...|.++|-||||.+++.++..+|
T Consensus 31 vr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~-gy~eI~v~GlSmGGv~alkla~~~p-- 107 (243)
T COG1647 31 VRMLGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEA-GYDEIAVVGLSMGGVFALKLAYHYP-- 107 (243)
T ss_pred HHHHHHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHc-CCCeEEEEeecchhHHHHHHHhhCC--
Confidence 4578999999999 9999999999431 111125788889988888888743 4458999999999999999999988
Q ss_pred HHhhhhcceEEecCCCCc
Q psy4395 165 WKSKFVRSLVSLAAPWGG 182 (283)
Q Consensus 165 ~~~~~v~~~i~i~~p~~g 182 (283)
++++|.+++|...
T Consensus 108 -----~K~iv~m~a~~~~ 120 (243)
T COG1647 108 -----PKKIVPMCAPVNV 120 (243)
T ss_pred -----ccceeeecCCccc
Confidence 5799999998764
No 41
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.36 E-value=4.7e-12 Score=113.57 Aligned_cols=87 Identities=18% Similarity=0.172 Sum_probs=60.6
Q ss_pred HHHHHHHHHhCCc-ccCCCcCcCCCCCCCCCC--cchHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCCh
Q psy4395 87 FSYIAAALVGLGY-QRDLSMRGAPYDFRKAPN--ENQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSS 163 (283)
Q Consensus 87 ~~~l~~~L~~~g~-~~~~d~~g~g~~~r~~~~--~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~~ 163 (283)
|...++.|.+ +| ++++|++|||.+.+.... ......+.+.+.++...+..+..+++|+||||||.+++.++..+|+
T Consensus 121 ~~~~~~~L~~-~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~lvGhS~GG~la~~~a~~~p~ 199 (402)
T PLN02894 121 FFRNFDALAS-RFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAKNLSNFILLGHSFGGYVAAKYALKHPE 199 (402)
T ss_pred HHHHHHHHHh-CCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHcCCCCeEEEEECHHHHHHHHHHHhCch
Confidence 4456677776 48 999999999987553321 1122222233334444433445589999999999999999999998
Q ss_pred hHHhhhhcceEEecCC
Q psy4395 164 AWKSKFVRSLVSLAAP 179 (283)
Q Consensus 164 ~~~~~~v~~~i~i~~p 179 (283)
. |+++|+++++
T Consensus 200 ~-----v~~lvl~~p~ 210 (402)
T PLN02894 200 H-----VQHLILVGPA 210 (402)
T ss_pred h-----hcEEEEECCc
Confidence 7 9999988764
No 42
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.36 E-value=2e-12 Score=107.19 Aligned_cols=83 Identities=19% Similarity=0.232 Sum_probs=63.1
Q ss_pred HHHHHHHHHhCCc-ccCCCcCcCCCCCCCCC-CcchHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCChh
Q psy4395 87 FSYIAAALVGLGY-QRDLSMRGAPYDFRKAP-NENQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSSA 164 (283)
Q Consensus 87 ~~~l~~~L~~~g~-~~~~d~~g~g~~~r~~~-~~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~~~ 164 (283)
|..+++.|. .|| ++++|++|+|.+..... .+..++++++.+.++.+ +..+++++||||||.++..++..+|+.
T Consensus 29 ~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~----~~~~v~liG~S~Gg~~a~~~a~~~p~~ 103 (251)
T TIGR02427 29 WDPVLPALT-PDFRVLRYDKRGHGLSDAPEGPYSIEDLADDVLALLDHL----GIERAVFCGLSLGGLIAQGLAARRPDR 103 (251)
T ss_pred HHHHHHHhh-cccEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CCCceEEEEeCchHHHHHHHHHHCHHH
Confidence 456777776 578 89999999998743321 24556666666666654 335899999999999999999998886
Q ss_pred HHhhhhcceEEecCC
Q psy4395 165 WKSKFVRSLVSLAAP 179 (283)
Q Consensus 165 ~~~~~v~~~i~i~~p 179 (283)
|+++|+++++
T Consensus 104 -----v~~li~~~~~ 113 (251)
T TIGR02427 104 -----VRALVLSNTA 113 (251)
T ss_pred -----hHHHhhccCc
Confidence 9999988764
No 43
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.35 E-value=2.5e-12 Score=113.48 Aligned_cols=87 Identities=11% Similarity=0.130 Sum_probs=72.3
Q ss_pred HHHHHHHHhCCc-ccCCCcCcCCCCCCCCCCcchHHHH-HHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCChhH
Q psy4395 88 SYIAAALVGLGY-QRDLSMRGAPYDFRKAPNENQEYFA-NFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSSAW 165 (283)
Q Consensus 88 ~~l~~~L~~~g~-~~~~d~~g~g~~~r~~~~~~~~~~~-~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~~~~ 165 (283)
+.+++.|.++|| ++.+|++|+|.+.+ ..+.+++.. ++.+.++.+.+..+..+++++||||||.++..++..+|+.
T Consensus 84 ~~~~~~L~~~G~~V~~~D~~g~g~s~~--~~~~~d~~~~~~~~~v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~~~~- 160 (350)
T TIGR01836 84 RSLVRGLLERGQDVYLIDWGYPDRADR--YLTLDDYINGYIDKCVDYICRTSKLDQISLLGICQGGTFSLCYAALYPDK- 160 (350)
T ss_pred chHHHHHHHCCCeEEEEeCCCCCHHHh--cCCHHHHHHHHHHHHHHHHHHHhCCCcccEEEECHHHHHHHHHHHhCchh-
Confidence 378899999999 99999999885432 224566654 4888999998888778999999999999999999988876
Q ss_pred HhhhhcceEEecCCCC
Q psy4395 166 KSKFVRSLVSLAAPWG 181 (283)
Q Consensus 166 ~~~~v~~~i~i~~p~~ 181 (283)
|+++|++++|..
T Consensus 161 ----v~~lv~~~~p~~ 172 (350)
T TIGR01836 161 ----IKNLVTMVTPVD 172 (350)
T ss_pred ----eeeEEEeccccc
Confidence 999999998864
No 44
>PRK06489 hypothetical protein; Provisional
Probab=99.35 E-value=2.2e-12 Score=114.24 Aligned_cols=76 Identities=12% Similarity=0.117 Sum_probs=53.6
Q ss_pred hCCc-ccCCCcCcCCCCCCCCC--------CcchHHHHHHHHHHHHHHHHcCCCCEE-EEEeCcccHHHHHHHHcCChhH
Q psy4395 96 GLGY-QRDLSMRGAPYDFRKAP--------NENQEYFANFKALIEETYDLNGGTPVV-LVAHSMGSLMCLYFLQRQSSAW 165 (283)
Q Consensus 96 ~~g~-~~~~d~~g~g~~~r~~~--------~~~~~~~~~l~~~i~~~~~~~~~~~v~-lvgHSmGg~va~~~~~~~~~~~ 165 (283)
..+| ++++|++|||.+..... .+.+++++++.+.+ .+..+..+++ |+||||||.+++.++..+|+.
T Consensus 103 ~~~~~Via~Dl~GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l---~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~- 178 (360)
T PRK06489 103 ASKYFIILPDGIGHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLV---TEGLGVKHLRLILGTSMGGMHAWMWGEKYPDF- 178 (360)
T ss_pred ccCCEEEEeCCCCCCCCCCCCcCCCCCCCcccHHHHHHHHHHHH---HHhcCCCceeEEEEECHHHHHHHHHHHhCchh-
Confidence 4568 89999999997754221 12344444443332 2223444664 899999999999999999997
Q ss_pred HhhhhcceEEecCC
Q psy4395 166 KSKFVRSLVSLAAP 179 (283)
Q Consensus 166 ~~~~v~~~i~i~~p 179 (283)
|+++|++++.
T Consensus 179 ----V~~LVLi~s~ 188 (360)
T PRK06489 179 ----MDALMPMASQ 188 (360)
T ss_pred ----hheeeeeccC
Confidence 9999998763
No 45
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=99.32 E-value=1.6e-12 Score=105.77 Aligned_cols=97 Identities=23% Similarity=0.284 Sum_probs=57.1
Q ss_pred HHHHHHHhCCcc----cCCCcCcCCCCC-CCCCCcchHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCCh
Q psy4395 89 YIAAALVGLGYQ----RDLSMRGAPYDF-RKAPNENQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSS 163 (283)
Q Consensus 89 ~l~~~L~~~g~~----~~~d~~g~g~~~-r~~~~~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~~ 163 (283)
.+++.|.++||. ++.++-...... -.......+...+++++|+.+.+..+. +|.||||||||++++++++....
T Consensus 20 ~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa-kVDIVgHS~G~~iaR~yi~~~~~ 98 (219)
T PF01674_consen 20 TLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA-KVDIVGHSMGGTIARYYIKGGGG 98 (219)
T ss_dssp HHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT---EEEEEETCHHHHHHHHHHHCTG
T ss_pred HHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC-EEEEEEcCCcCHHHHHHHHHcCC
Confidence 788999999994 444431111100 000001234557899999999999888 99999999999999999886431
Q ss_pred h--------HHhhhhcceEEecCCCCcchhh
Q psy4395 164 A--------WKSKFVRSLVSLAAPWGGSVKA 186 (283)
Q Consensus 164 ~--------~~~~~v~~~i~i~~p~~g~~~~ 186 (283)
. -....+..+|.++++..|....
T Consensus 99 ~d~~~~lg~~~~~~v~t~v~lag~n~G~~~~ 129 (219)
T PF01674_consen 99 ADKVVNLGPPLTSKVGTFVGLAGANHGLTSC 129 (219)
T ss_dssp GGTEEE----GGG-EEEEEEES--TT--CGH
T ss_pred CCcccCccccccccccccccccccccccccc
Confidence 1 0012378888888887776543
No 46
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.32 E-value=1.9e-11 Score=104.16 Aligned_cols=89 Identities=17% Similarity=0.082 Sum_probs=71.1
Q ss_pred hHHHHHHHHHhCCc-ccCCCcCcCCCCCCCCCCcchHHHHHHHHHHHHHHHHcC-CCCEEEEEeCcccHHHHHHHHcCCh
Q psy4395 86 YFSYIAAALVGLGY-QRDLSMRGAPYDFRKAPNENQEYFANFKALIEETYDLNG-GTPVVLVAHSMGSLMCLYFLQRQSS 163 (283)
Q Consensus 86 ~~~~l~~~L~~~g~-~~~~d~~g~g~~~r~~~~~~~~~~~~l~~~i~~~~~~~~-~~~v~lvgHSmGg~va~~~~~~~~~ 163 (283)
.+..+++.|++.|| ++++|++|||.+... ......+.+|+.++++.+.++.+ ..+++++||||||.++..++... .
T Consensus 45 ~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~-~~~~~~~~~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~~-~ 122 (274)
T TIGR03100 45 QFVLLARRLAEAGFPVLRFDYRGMGDSEGE-NLGFEGIDADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPAD-L 122 (274)
T ss_pred HHHHHHHHHHHCCCEEEEeCCCCCCCCCCC-CCCHHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhhC-C
Confidence 35688999999999 899999999976432 23456778899999999887643 35799999999999999987653 3
Q ss_pred hHHhhhhcceEEecCCCC
Q psy4395 164 AWKSKFVRSLVSLAAPWG 181 (283)
Q Consensus 164 ~~~~~~v~~~i~i~~p~~ 181 (283)
. |+++|+++++..
T Consensus 123 ~-----v~~lil~~p~~~ 135 (274)
T TIGR03100 123 R-----VAGLVLLNPWVR 135 (274)
T ss_pred C-----ccEEEEECCccC
Confidence 3 999999987754
No 47
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.32 E-value=2.5e-12 Score=113.20 Aligned_cols=85 Identities=20% Similarity=0.250 Sum_probs=62.7
Q ss_pred HHHHHH---HHHhCCc-ccCCCcCcCCCCCCCCCCcchHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCC
Q psy4395 87 FSYIAA---ALVGLGY-QRDLSMRGAPYDFRKAPNENQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQS 162 (283)
Q Consensus 87 ~~~l~~---~L~~~g~-~~~~d~~g~g~~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~ 162 (283)
|..++. .|...+| ++++|+||||.+... .....++++++.++++.+.. .+.++||||||||.|++.++.++|
T Consensus 85 w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~~-~~~~~~~a~dl~~ll~~l~l---~~~~~lvG~SmGG~vA~~~A~~~P 160 (343)
T PRK08775 85 WEGLVGSGRALDPARFRLLAFDFIGADGSLDV-PIDTADQADAIALLLDALGI---ARLHAFVGYSYGALVGLQFASRHP 160 (343)
T ss_pred chhccCCCCccCccccEEEEEeCCCCCCCCCC-CCCHHHHHHHHHHHHHHcCC---CcceEEEEECHHHHHHHHHHHHCh
Confidence 444554 4544468 899999999866322 23456677788877776532 124589999999999999999999
Q ss_pred hhHHhhhhcceEEecCCC
Q psy4395 163 SAWKSKFVRSLVSLAAPW 180 (283)
Q Consensus 163 ~~~~~~~v~~~i~i~~p~ 180 (283)
+. |+++|++++..
T Consensus 161 ~~-----V~~LvLi~s~~ 173 (343)
T PRK08775 161 AR-----VRTLVVVSGAH 173 (343)
T ss_pred Hh-----hheEEEECccc
Confidence 97 99999998754
No 48
>PLN02872 triacylglycerol lipase
Probab=99.28 E-value=1.5e-11 Score=109.52 Aligned_cols=87 Identities=21% Similarity=0.330 Sum_probs=64.3
Q ss_pred HHHHHHHhCCc-ccCCCcCcCCCCCCCC---C-------CcchHHH-HHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHH
Q psy4395 89 YIAAALVGLGY-QRDLSMRGAPYDFRKA---P-------NENQEYF-ANFKALIEETYDLNGGTPVVLVAHSMGSLMCLY 156 (283)
Q Consensus 89 ~l~~~L~~~g~-~~~~d~~g~g~~~r~~---~-------~~~~~~~-~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~ 156 (283)
.++..|+++|| |+..|+||+++++... . .++++.. .|+.++|+.+.+..+ .++++|||||||.++..
T Consensus 98 sla~~La~~GydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~-~~v~~VGhS~Gg~~~~~ 176 (395)
T PLN02872 98 SLGFILADHGFDVWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITN-SKIFIVGHSQGTIMSLA 176 (395)
T ss_pred chHHHHHhCCCCcccccccccccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccC-CceEEEEECHHHHHHHH
Confidence 46677899999 8999999988764211 1 1344555 799999999876544 69999999999999986
Q ss_pred HHHcCChhHHhhhhcceEEecCC
Q psy4395 157 FLQRQSSAWKSKFVRSLVSLAAP 179 (283)
Q Consensus 157 ~~~~~~~~~~~~~v~~~i~i~~p 179 (283)
++ ..|+. .+.|+.++++++.
T Consensus 177 ~~-~~p~~--~~~v~~~~~l~P~ 196 (395)
T PLN02872 177 AL-TQPNV--VEMVEAAALLCPI 196 (395)
T ss_pred Hh-hChHH--HHHHHHHHHhcch
Confidence 65 45652 3348888887765
No 49
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.28 E-value=5.8e-12 Score=111.21 Aligned_cols=79 Identities=20% Similarity=0.135 Sum_probs=57.3
Q ss_pred HHHhCCc-ccCCCcCc--CCCCCCC-------------CCCcchHHHHHHHHHHHHHHHHcCCCC-EEEEEeCcccHHHH
Q psy4395 93 ALVGLGY-QRDLSMRG--APYDFRK-------------APNENQEYFANFKALIEETYDLNGGTP-VVLVAHSMGSLMCL 155 (283)
Q Consensus 93 ~L~~~g~-~~~~d~~g--~g~~~r~-------------~~~~~~~~~~~l~~~i~~~~~~~~~~~-v~lvgHSmGg~va~ 155 (283)
.|...+| |+++|++| ||.+... ...+..++.+++.++++.+ +..+ ++|+||||||++++
T Consensus 67 ~l~~~~~~vi~~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~~~l~G~S~Gg~ia~ 142 (351)
T TIGR01392 67 AIDTDRYFVVCSNVLGGCYGSTGPSSINPGGRPYGSDFPLITIRDDVKAQKLLLDHL----GIEQIAAVVGGSMGGMQAL 142 (351)
T ss_pred CcCCCceEEEEecCCCCCCCCCCCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHc----CCCCceEEEEECHHHHHHH
Confidence 4556778 99999999 5543210 0123455555555555543 4456 99999999999999
Q ss_pred HHHHcCChhHHhhhhcceEEecCCC
Q psy4395 156 YFLQRQSSAWKSKFVRSLVSLAAPW 180 (283)
Q Consensus 156 ~~~~~~~~~~~~~~v~~~i~i~~p~ 180 (283)
.++..+|+. |+++|+++++.
T Consensus 143 ~~a~~~p~~-----v~~lvl~~~~~ 162 (351)
T TIGR01392 143 EWAIDYPER-----VRAIVVLATSA 162 (351)
T ss_pred HHHHHChHh-----hheEEEEccCC
Confidence 999999987 99999998764
No 50
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.27 E-value=1.3e-11 Score=106.83 Aligned_cols=75 Identities=21% Similarity=0.171 Sum_probs=54.5
Q ss_pred hCCc-ccCCCcCcCCCCCCCCC---CcchHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCChhHHhhhhc
Q psy4395 96 GLGY-QRDLSMRGAPYDFRKAP---NENQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSSAWKSKFVR 171 (283)
Q Consensus 96 ~~g~-~~~~d~~g~g~~~r~~~---~~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~~~~~~~~v~ 171 (283)
..+| ++++|++|||.+..... ....++.+++..+ .+..+..+++++||||||.+++.++..+|+. |+
T Consensus 51 ~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~l----~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~~-----v~ 121 (306)
T TIGR01249 51 PETYRIVLFDQRGCGKSTPHACLEENTTWDLVADIEKL----REKLGIKNWLVFGGSWGSTLALAYAQTHPEV-----VT 121 (306)
T ss_pred ccCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHH----HHHcCCCCEEEEEECHHHHHHHHHHHHChHh-----hh
Confidence 3578 89999999997743221 1233344444444 4444455899999999999999999999987 99
Q ss_pred ceEEecCC
Q psy4395 172 SLVSLAAP 179 (283)
Q Consensus 172 ~~i~i~~p 179 (283)
++|++++.
T Consensus 122 ~lvl~~~~ 129 (306)
T TIGR01249 122 GLVLRGIF 129 (306)
T ss_pred hheeeccc
Confidence 99988764
No 51
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.22 E-value=3.5e-11 Score=106.82 Aligned_cols=84 Identities=25% Similarity=0.246 Sum_probs=61.7
Q ss_pred HHHHHHHHHhCCc-ccCCCcCcCCCCCCC-CCCcchHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCChh
Q psy4395 87 FSYIAAALVGLGY-QRDLSMRGAPYDFRK-APNENQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSSA 164 (283)
Q Consensus 87 ~~~l~~~L~~~g~-~~~~d~~g~g~~~r~-~~~~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~~~ 164 (283)
|..++..|... | ++++|++|||.+... ...+..++.+++.++++. .+..+++++||||||.++..++..+|..
T Consensus 147 ~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~lvG~S~Gg~~a~~~a~~~~~~ 221 (371)
T PRK14875 147 WLFNHAALAAG-RPVIALDLPGHGASSKAVGAGSLDELAAAVLAFLDA----LGIERAHLVGHSMGGAVALRLAARAPQR 221 (371)
T ss_pred HHHHHHHHhcC-CEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHh----cCCccEEEEeechHHHHHHHHHHhCchh
Confidence 44667777664 8 899999999976322 223455555555555543 4445899999999999999999998876
Q ss_pred HHhhhhcceEEecCCC
Q psy4395 165 WKSKFVRSLVSLAAPW 180 (283)
Q Consensus 165 ~~~~~v~~~i~i~~p~ 180 (283)
+.++|+++++.
T Consensus 222 -----v~~lv~~~~~~ 232 (371)
T PRK14875 222 -----VASLTLIAPAG 232 (371)
T ss_pred -----eeEEEEECcCC
Confidence 99999987653
No 52
>PRK07581 hypothetical protein; Validated
Probab=99.17 E-value=6.4e-11 Score=104.04 Aligned_cols=83 Identities=18% Similarity=0.099 Sum_probs=58.9
Q ss_pred HHHhCCc-ccCCCcCcCCCCCCCCC----CcchH-----HHHHHHHHHHHHHHHcCCCC-EEEEEeCcccHHHHHHHHcC
Q psy4395 93 ALVGLGY-QRDLSMRGAPYDFRKAP----NENQE-----YFANFKALIEETYDLNGGTP-VVLVAHSMGSLMCLYFLQRQ 161 (283)
Q Consensus 93 ~L~~~g~-~~~~d~~g~g~~~r~~~----~~~~~-----~~~~l~~~i~~~~~~~~~~~-v~lvgHSmGg~va~~~~~~~ 161 (283)
.|...+| ++++|+||||.|..... .+.+. +.+++.+..+.+.+..+..+ ++||||||||.++..++..+
T Consensus 66 ~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~ 145 (339)
T PRK07581 66 ALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPHVTIYDNVRAQHRLLTEKFGIERLALVVGWSMGAQQTYHWAVRY 145 (339)
T ss_pred ccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCceeHHHHHHHHHHHHHHHhCCCceEEEEEeCHHHHHHHHHHHHC
Confidence 3445578 99999999998754321 11222 34666554443444345557 58999999999999999999
Q ss_pred ChhHHhhhhcceEEecCCC
Q psy4395 162 SSAWKSKFVRSLVSLAAPW 180 (283)
Q Consensus 162 ~~~~~~~~v~~~i~i~~p~ 180 (283)
|+. |+++|++++..
T Consensus 146 P~~-----V~~Lvli~~~~ 159 (339)
T PRK07581 146 PDM-----VERAAPIAGTA 159 (339)
T ss_pred HHH-----HhhheeeecCC
Confidence 997 99999997643
No 53
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=99.17 E-value=1.1e-10 Score=95.94 Aligned_cols=69 Identities=20% Similarity=0.173 Sum_probs=45.2
Q ss_pred chHHHHHHHHHHHHHHHHcCC--CCEEEEEeCcccHHHHHHHHcCChhH-------HhhhhcceEEecCCCCcchhhH
Q psy4395 119 NQEYFANFKALIEETYDLNGG--TPVVLVAHSMGSLMCLYFLQRQSSAW-------KSKFVRSLVSLAAPWGGSVKAV 187 (283)
Q Consensus 119 ~~~~~~~l~~~i~~~~~~~~~--~~v~lvgHSmGg~va~~~~~~~~~~~-------~~~~v~~~i~i~~p~~g~~~~~ 187 (283)
.+...+++.+.|....+..+. .|+++|||||||+++++++....... ..-.+..+|++++|+.|+..+.
T Consensus 55 I~~~g~rL~~eI~~~~~~~~~~~~~IsfIgHSLGGli~r~al~~~~~~~~~~~~~~~~~~~~~fitlatPH~G~~~~~ 132 (217)
T PF05057_consen 55 IDVCGERLAEEILEHIKDYESKIRKISFIGHSLGGLIARYALGLLHDKPQYFPGFFQKIKPHNFITLATPHLGSRYAS 132 (217)
T ss_pred hHHHHHHHHHHHHHhccccccccccceEEEecccHHHHHHHHHHhhhccccccccccceeeeeEEEeCCCCCCCcccc
Confidence 444555555555554444333 48999999999999999877532211 0113567888999999986553
No 54
>KOG2382|consensus
Probab=99.16 E-value=8.8e-11 Score=99.08 Aligned_cols=88 Identities=18% Similarity=0.236 Sum_probs=68.0
Q ss_pred HHHHHHHHHhC-Cc-ccCCCcCcCCCCCCCCCCcchHHHHHHHHHHHHHHHHcCCCCEEEEEeCccc-HHHHHHHHcCCh
Q psy4395 87 FSYIAAALVGL-GY-QRDLSMRGAPYDFRKAPNENQEYFANFKALIEETYDLNGGTPVVLVAHSMGS-LMCLYFLQRQSS 163 (283)
Q Consensus 87 ~~~l~~~L~~~-g~-~~~~d~~g~g~~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg-~va~~~~~~~~~ 163 (283)
|+.+...|++. +- +++.|+|-||.+-.....+....++|+..+|+.....+...+++|+|||||| .+++......|+
T Consensus 68 w~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~h~~~~ma~dv~~Fi~~v~~~~~~~~~~l~GHsmGG~~~~m~~t~~~p~ 147 (315)
T KOG2382|consen 68 WRSVAKNLSRKLGRDVYAVDVRNHGSSPKITVHNYEAMAEDVKLFIDGVGGSTRLDPVVLLGHSMGGVKVAMAETLKKPD 147 (315)
T ss_pred HHHHHHHhcccccCceEEEecccCCCCccccccCHHHHHHHHHHHHHHcccccccCCceecccCcchHHHHHHHHHhcCc
Confidence 45777777763 44 7999999999876666666778889999999998755445699999999999 666666777887
Q ss_pred hHHhhhhcceEEe-cCC
Q psy4395 164 AWKSKFVRSLVSL-AAP 179 (283)
Q Consensus 164 ~~~~~~v~~~i~i-~~p 179 (283)
. +..+|.+ .+|
T Consensus 148 ~-----~~rliv~D~sP 159 (315)
T KOG2382|consen 148 L-----IERLIVEDISP 159 (315)
T ss_pred c-----cceeEEEecCC
Confidence 6 7888877 345
No 55
>PRK13604 luxD acyl transferase; Provisional
Probab=99.16 E-value=1.8e-10 Score=97.99 Aligned_cols=88 Identities=10% Similarity=-0.003 Sum_probs=63.4
Q ss_pred hHHHHHHHHHhCCc-ccCCCcCcC-CCCCC-CCCCcchHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCC
Q psy4395 86 YFSYIAAALVGLGY-QRDLSMRGA-PYDFR-KAPNENQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQS 162 (283)
Q Consensus 86 ~~~~l~~~L~~~g~-~~~~d~~g~-g~~~r-~~~~~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~ 162 (283)
+|..+++.|+++|| ++.+|.||+ |.|.. ....+......|+.++|+.+++. ...++.|+||||||.++...+...
T Consensus 52 ~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~~t~s~g~~Dl~aaid~lk~~-~~~~I~LiG~SmGgava~~~A~~~- 129 (307)
T PRK13604 52 HFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDEFTMSIGKNSLLTVVDWLNTR-GINNLGLIAASLSARIAYEVINEI- 129 (307)
T ss_pred HHHHHHHHHHHCCCEEEEecCCCCCCCCCCccccCcccccHHHHHHHHHHHHhc-CCCceEEEEECHHHHHHHHHhcCC-
Confidence 37799999999999 999999987 75522 11112233468999999999775 345899999999999986666532
Q ss_pred hhHHhhhhcceEEecCCCCc
Q psy4395 163 SAWKSKFVRSLVSLAAPWGG 182 (283)
Q Consensus 163 ~~~~~~~v~~~i~i~~p~~g 182 (283)
. ++.+|+. +|+..
T Consensus 130 -~-----v~~lI~~-sp~~~ 142 (307)
T PRK13604 130 -D-----LSFLITA-VGVVN 142 (307)
T ss_pred -C-----CCEEEEc-CCccc
Confidence 2 6777755 44433
No 56
>KOG2564|consensus
Probab=99.12 E-value=2.9e-10 Score=93.33 Aligned_cols=92 Identities=20% Similarity=0.201 Sum_probs=66.6
Q ss_pred cccchHHHHHHHHHhCCc--ccCCCcCcCCCCCCCC--CCcchHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHH
Q psy4395 82 RVGSYFSYIAAALVGLGY--QRDLSMRGAPYDFRKA--PNENQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYF 157 (283)
Q Consensus 82 ~~~~~~~~l~~~L~~~g~--~~~~d~~g~g~~~r~~--~~~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~ 157 (283)
+++-.|..++..|...-- ++++|+||||.+--.. ..+.+....|+-++|+.+..+.+ .+|+||||||||.|+.+.
T Consensus 85 ~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~~~fge~~-~~iilVGHSmGGaIav~~ 163 (343)
T KOG2564|consen 85 SSALSFAIFASELKSKIRCRCLALDLRGHGETKVENEDDLSLETMSKDFGAVIKELFGELP-PQIILVGHSMGGAIAVHT 163 (343)
T ss_pred ccchhHHHHHHHHHhhcceeEEEeeccccCccccCChhhcCHHHHHHHHHHHHHHHhccCC-CceEEEeccccchhhhhh
Confidence 344458888898887433 6899999999653221 12567788899999999886543 389999999999999887
Q ss_pred HHcCChhHHhhhhcceEEecC
Q psy4395 158 LQRQSSAWKSKFVRSLVSLAA 178 (283)
Q Consensus 158 ~~~~~~~~~~~~v~~~i~i~~ 178 (283)
+...--. .+.+++.|.-
T Consensus 164 a~~k~lp----sl~Gl~viDV 180 (343)
T KOG2564|consen 164 AASKTLP----SLAGLVVIDV 180 (343)
T ss_pred hhhhhch----hhhceEEEEE
Confidence 7652211 2788888754
No 57
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.11 E-value=3.5e-10 Score=86.53 Aligned_cols=77 Identities=19% Similarity=0.286 Sum_probs=58.7
Q ss_pred HHHHHHHHHhCCc-ccCCCcCcCCCCCCCCCCcchHHHHHHHHHHHHHHHH-cCCCCEEEEEeCcccHHHHHHHHcCChh
Q psy4395 87 FSYIAAALVGLGY-QRDLSMRGAPYDFRKAPNENQEYFANFKALIEETYDL-NGGTPVVLVAHSMGSLMCLYFLQRQSSA 164 (283)
Q Consensus 87 ~~~l~~~L~~~g~-~~~~d~~g~g~~~r~~~~~~~~~~~~l~~~i~~~~~~-~~~~~v~lvgHSmGg~va~~~~~~~~~~ 164 (283)
|..+++.|++.|| ++.+|+++++.+. ...++.++++.+.+. ....+++++||||||.++..++... ..
T Consensus 15 ~~~~~~~l~~~G~~v~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~-~~ 84 (145)
T PF12695_consen 15 YQPLAEALAEQGYAVVAFDYPGHGDSD---------GADAVERVLADIRAGYPDPDRIILIGHSMGGAIAANLAARN-PR 84 (145)
T ss_dssp HHHHHHHHHHTTEEEEEESCTTSTTSH---------HSHHHHHHHHHHHHHHCTCCEEEEEEETHHHHHHHHHHHHS-TT
T ss_pred HHHHHHHHHHCCCEEEEEecCCCCccc---------hhHHHHHHHHHHHhhcCCCCcEEEEEEccCcHHHHHHhhhc-cc
Confidence 4578899999999 8999999988541 113555566654332 2446999999999999999999877 33
Q ss_pred HHhhhhcceEEecC
Q psy4395 165 WKSKFVRSLVSLAA 178 (283)
Q Consensus 165 ~~~~~v~~~i~i~~ 178 (283)
|+++|++++
T Consensus 85 -----v~~~v~~~~ 93 (145)
T PF12695_consen 85 -----VKAVVLLSP 93 (145)
T ss_dssp -----ESEEEEESE
T ss_pred -----eeEEEEecC
Confidence 899999987
No 58
>PRK11071 esterase YqiA; Provisional
Probab=99.11 E-value=4.9e-10 Score=90.18 Aligned_cols=70 Identities=19% Similarity=0.160 Sum_probs=48.2
Q ss_pred HHHHHHh--CCc-ccCCCcCcCCCCCCCCCCcchHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCChhHH
Q psy4395 90 IAAALVG--LGY-QRDLSMRGAPYDFRKAPNENQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSSAWK 166 (283)
Q Consensus 90 l~~~L~~--~g~-~~~~d~~g~g~~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~~~~~ 166 (283)
+...|.+ .+| ++++|++|++ .+..+ .++.+.++.+..+++++||||||.++..++..+|.
T Consensus 22 ~~~~l~~~~~~~~v~~~dl~g~~----------~~~~~----~l~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~--- 84 (190)
T PRK11071 22 LKNWLAQHHPDIEMIVPQLPPYP----------ADAAE----LLESLVLEHGGDPLGLVGSSLGGYYATWLSQCFML--- 84 (190)
T ss_pred HHHHHHHhCCCCeEEeCCCCCCH----------HHHHH----HHHHHHHHcCCCCeEEEEECHHHHHHHHHHHHcCC---
Confidence 4455554 357 7999999875 12333 44444444455689999999999999999998873
Q ss_pred hhhhcceEEecCCCC
Q psy4395 167 SKFVRSLVSLAAPWG 181 (283)
Q Consensus 167 ~~~v~~~i~i~~p~~ 181 (283)
.+|+++++..
T Consensus 85 -----~~vl~~~~~~ 94 (190)
T PRK11071 85 -----PAVVVNPAVR 94 (190)
T ss_pred -----CEEEECCCCC
Confidence 2577776543
No 59
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.11 E-value=6.3e-10 Score=102.09 Aligned_cols=85 Identities=18% Similarity=0.189 Sum_probs=66.1
Q ss_pred HHHHHHHhCCc-ccCCCcCcCCCCCCCCCCcchHHHH-HHHHHHHHHHHHcCCCCEEEEEeCcccHHHH----HHHHcC-
Q psy4395 89 YIAAALVGLGY-QRDLSMRGAPYDFRKAPNENQEYFA-NFKALIEETYDLNGGTPVVLVAHSMGSLMCL----YFLQRQ- 161 (283)
Q Consensus 89 ~l~~~L~~~g~-~~~~d~~g~g~~~r~~~~~~~~~~~-~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~----~~~~~~- 161 (283)
.++++|.+.|| |+.+|++|+|.+.+. ...++|.. .+.+.|+.+.+..+..+++++||||||.++. .++...
T Consensus 211 Slv~~L~~qGf~V~~iDwrgpg~s~~~--~~~ddY~~~~i~~al~~v~~~~g~~kv~lvG~cmGGtl~a~ala~~aa~~~ 288 (532)
T TIGR01838 211 SLVRWLVEQGHTVFVISWRNPDASQAD--KTFDDYIRDGVIAALEVVEAITGEKQVNCVGYCIGGTLLSTALAYLAARGD 288 (532)
T ss_pred HHHHHHHHCCcEEEEEECCCCCccccc--CChhhhHHHHHHHHHHHHHHhcCCCCeEEEEECcCcHHHHHHHHHHHHhCC
Confidence 78999999999 999999999865332 23455654 5888899988877888999999999999852 234444
Q ss_pred ChhHHhhhhcceEEecCCC
Q psy4395 162 SSAWKSKFVRSLVSLAAPW 180 (283)
Q Consensus 162 ~~~~~~~~v~~~i~i~~p~ 180 (283)
++. |++++++++|.
T Consensus 289 ~~r-----v~slvll~t~~ 302 (532)
T TIGR01838 289 DKR-----IKSATFFTTLL 302 (532)
T ss_pred CCc-----cceEEEEecCc
Confidence 554 99999998874
No 60
>KOG0598|consensus
Probab=99.10 E-value=1.2e-10 Score=99.01 Aligned_cols=64 Identities=27% Similarity=0.454 Sum_probs=57.0
Q ss_pred ccccCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHHHHH--------------hcCCCcceeeeEEEEECCC
Q psy4395 220 RWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIIN--------------ERMTHQGMILAFTCYRNPH 283 (283)
Q Consensus 220 ~~~~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~~~--------------~~~~h~~iv~l~~~~~~~~ 283 (283)
....++|++.+.+|+|+||.|++++.+.+++.||||+++|.++.. .+++|||||+|+++|||++
T Consensus 21 ~~~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~ 98 (357)
T KOG0598|consen 21 MVGPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEE 98 (357)
T ss_pred cCChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCC
Confidence 345789999999999999999999999999999999999976532 2689999999999999974
No 61
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.10 E-value=3e-10 Score=101.31 Aligned_cols=79 Identities=18% Similarity=0.150 Sum_probs=56.6
Q ss_pred HHHhCCc-ccCCCcCcC-CCCCCCC---------------CCcchHHHHHHHHHHHHHHHHcCCCC-EEEEEeCcccHHH
Q psy4395 93 ALVGLGY-QRDLSMRGA-PYDFRKA---------------PNENQEYFANFKALIEETYDLNGGTP-VVLVAHSMGSLMC 154 (283)
Q Consensus 93 ~L~~~g~-~~~~d~~g~-g~~~r~~---------------~~~~~~~~~~l~~~i~~~~~~~~~~~-v~lvgHSmGg~va 154 (283)
.|...+| ++++|++|+ +.+...+ ..+..++.+++.++++.+ +..+ ++++||||||.++
T Consensus 86 ~l~~~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l----~~~~~~~lvG~S~Gg~ia 161 (379)
T PRK00175 86 PIDTDRYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPVITIRDWVRAQARLLDAL----GITRLAAVVGGSMGGMQA 161 (379)
T ss_pred ccCccceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHh----CCCCceEEEEECHHHHHH
Confidence 3434578 999999983 3221111 124556666677776654 3446 5999999999999
Q ss_pred HHHHHcCChhHHhhhhcceEEecCCC
Q psy4395 155 LYFLQRQSSAWKSKFVRSLVSLAAPW 180 (283)
Q Consensus 155 ~~~~~~~~~~~~~~~v~~~i~i~~p~ 180 (283)
+.++..+|+. |+++|++++..
T Consensus 162 ~~~a~~~p~~-----v~~lvl~~~~~ 182 (379)
T PRK00175 162 LEWAIDYPDR-----VRSALVIASSA 182 (379)
T ss_pred HHHHHhChHh-----hhEEEEECCCc
Confidence 9999999987 99999997654
No 62
>KOG4178|consensus
Probab=99.08 E-value=6.9e-10 Score=93.74 Aligned_cols=86 Identities=20% Similarity=0.258 Sum_probs=71.0
Q ss_pred HHHHHHHHHhCCc-ccCCCcCcCCCCCCCCCC---cchHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCC
Q psy4395 87 FSYIAAALVGLGY-QRDLSMRGAPYDFRKAPN---ENQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQS 162 (283)
Q Consensus 87 ~~~l~~~L~~~g~-~~~~d~~g~g~~~r~~~~---~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~ 162 (283)
|+.....|++.|| ++++|+||+|.+...... +......|+..+|+.+. .++++++||++|+++|-.++..+|
T Consensus 60 wr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~l~~di~~lld~Lg----~~k~~lvgHDwGaivaw~la~~~P 135 (322)
T KOG4178|consen 60 WRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTIDELVGDIVALLDHLG----LKKAFLVGHDWGAIVAWRLALFYP 135 (322)
T ss_pred hhhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeHHHHHHHHHHHHHHhc----cceeEEEeccchhHHHHHHHHhCh
Confidence 6788899999999 899999999987554431 34555666666666654 569999999999999999999999
Q ss_pred hhHHhhhhcceEEecCCCC
Q psy4395 163 SAWKSKFVRSLVSLAAPWG 181 (283)
Q Consensus 163 ~~~~~~~v~~~i~i~~p~~ 181 (283)
+. |+++|++..|+.
T Consensus 136 er-----v~~lv~~nv~~~ 149 (322)
T KOG4178|consen 136 ER-----VDGLVTLNVPFP 149 (322)
T ss_pred hh-----cceEEEecCCCC
Confidence 98 999999988876
No 63
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.08 E-value=3e-10 Score=117.22 Aligned_cols=82 Identities=22% Similarity=0.202 Sum_probs=61.5
Q ss_pred HHHHHHHHHhCCc-ccCCCcCcCCCCCCCC---------CCcchHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHH
Q psy4395 87 FSYIAAALVGLGY-QRDLSMRGAPYDFRKA---------PNENQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLY 156 (283)
Q Consensus 87 ~~~l~~~L~~~g~-~~~~d~~g~g~~~r~~---------~~~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~ 156 (283)
|..++..|.+ +| ++++|++|||.+.... ..+.+.+.+++.++++.+ +..+++|+||||||.+++.
T Consensus 1387 w~~~~~~L~~-~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l----~~~~v~LvGhSmGG~iAl~ 1461 (1655)
T PLN02980 1387 WIPIMKAISG-SARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHI----TPGKVTLVGYSMGARIALY 1461 (1655)
T ss_pred HHHHHHHHhC-CCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHh----CCCCEEEEEECHHHHHHHH
Confidence 4567777765 47 8999999999764321 113455566666666543 3458999999999999999
Q ss_pred HHHcCChhHHhhhhcceEEecC
Q psy4395 157 FLQRQSSAWKSKFVRSLVSLAA 178 (283)
Q Consensus 157 ~~~~~~~~~~~~~v~~~i~i~~ 178 (283)
++..+|+. |+++|++++
T Consensus 1462 ~A~~~P~~-----V~~lVlis~ 1478 (1655)
T PLN02980 1462 MALRFSDK-----IEGAVIISG 1478 (1655)
T ss_pred HHHhChHh-----hCEEEEECC
Confidence 99999987 999998864
No 64
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.08 E-value=8.4e-10 Score=98.62 Aligned_cols=85 Identities=11% Similarity=-0.038 Sum_probs=60.8
Q ss_pred HHHHHHHh--CCc-ccCCCcCcCCCCCCC-CCCcchHHHHHHHHHHHHHHHHc--CCCCEEEEEeCcccHHHHHHHHcCC
Q psy4395 89 YIAAALVG--LGY-QRDLSMRGAPYDFRK-APNENQEYFANFKALIEETYDLN--GGTPVVLVAHSMGSLMCLYFLQRQS 162 (283)
Q Consensus 89 ~l~~~L~~--~g~-~~~~d~~g~g~~~r~-~~~~~~~~~~~l~~~i~~~~~~~--~~~~v~lvgHSmGg~va~~~~~~~~ 162 (283)
.+++.|.. ..+ ++++|++|++.+... +........+++.++|+.+.+.. +-.+|+||||||||.+|..++...|
T Consensus 62 ~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~gl~l~~VhLIGHSLGAhIAg~ag~~~p 141 (442)
T TIGR03230 62 KLVAALYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEFNYPWDNVHLLGYSLGAHVAGIAGSLTK 141 (442)
T ss_pred HHHHHHHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHHHhCC
Confidence 35555542 247 899999999854321 11223445567788888775433 3468999999999999999998888
Q ss_pred hhHHhhhhcceEEecC
Q psy4395 163 SAWKSKFVRSLVSLAA 178 (283)
Q Consensus 163 ~~~~~~~v~~~i~i~~ 178 (283)
+. |.+++.+.+
T Consensus 142 ~r-----V~rItgLDP 152 (442)
T TIGR03230 142 HK-----VNRITGLDP 152 (442)
T ss_pred cc-----eeEEEEEcC
Confidence 76 899998865
No 65
>PRK05855 short chain dehydrogenase; Validated
Probab=99.07 E-value=4.9e-10 Score=105.28 Aligned_cols=87 Identities=23% Similarity=0.269 Sum_probs=61.3
Q ss_pred HHHHHHHHHhCCc-ccCCCcCcCCCCCCCCC---CcchHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCC
Q psy4395 87 FSYIAAALVGLGY-QRDLSMRGAPYDFRKAP---NENQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQS 162 (283)
Q Consensus 87 ~~~l~~~L~~~g~-~~~~d~~g~g~~~r~~~---~~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~ 162 (283)
|..+++.| ..+| ++++|++|||.|.+... .+.+++.+|+..+++.+. ...|++|+||||||.++..++...
T Consensus 41 w~~~~~~L-~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~dl~~~i~~l~---~~~~~~lvGhS~Gg~~a~~~a~~~- 115 (582)
T PRK05855 41 WDGVAPLL-ADRFRVVAYDVRGAGRSSAPKRTAAYTLARLADDFAAVIDAVS---PDRPVHLLAHDWGSIQGWEAVTRP- 115 (582)
T ss_pred HHHHHHHh-hcceEEEEecCCCCCCCCCCCcccccCHHHHHHHHHHHHHHhC---CCCcEEEEecChHHHHHHHHHhCc-
Confidence 55777888 5678 99999999998764332 246777888888888653 234699999999999998887762
Q ss_pred hhHHhhhhcceEEecCCC
Q psy4395 163 SAWKSKFVRSLVSLAAPW 180 (283)
Q Consensus 163 ~~~~~~~v~~~i~i~~p~ 180 (283)
.. ...+..++.+++|.
T Consensus 116 ~~--~~~v~~~~~~~~~~ 131 (582)
T PRK05855 116 RA--AGRIASFTSVSGPS 131 (582)
T ss_pred cc--hhhhhhheeccCCc
Confidence 21 11255555555553
No 66
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.07 E-value=3.8e-10 Score=96.02 Aligned_cols=86 Identities=15% Similarity=0.122 Sum_probs=58.9
Q ss_pred HHHHHHH-hCCc-ccCCCcCcCCCCCC-CCCCcchHHHHHHHHHHHHHHHHc--CCCCEEEEEeCcccHHHHHHHHcCCh
Q psy4395 89 YIAAALV-GLGY-QRDLSMRGAPYDFR-KAPNENQEYFANFKALIEETYDLN--GGTPVVLVAHSMGSLMCLYFLQRQSS 163 (283)
Q Consensus 89 ~l~~~L~-~~g~-~~~~d~~g~g~~~r-~~~~~~~~~~~~l~~~i~~~~~~~--~~~~v~lvgHSmGg~va~~~~~~~~~ 163 (283)
.+++.|. ..++ ++++|++++..... ..........+++.++|+.+.+.. +..+++||||||||.+|..++...++
T Consensus 56 ~l~~~ll~~~~~nVi~vD~~~~~~~~y~~a~~~~~~v~~~la~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~ 135 (275)
T cd00707 56 DLRKAYLSRGDYNVIVVDWGRGANPNYPQAVNNTRVVGAELAKFLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNG 135 (275)
T ss_pred HHHHHHHhcCCCEEEEEECccccccChHHHHHhHHHHHHHHHHHHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcC
Confidence 4555444 4568 89999988642110 000122334466777788776652 33589999999999999999998887
Q ss_pred hHHhhhhcceEEecCC
Q psy4395 164 AWKSKFVRSLVSLAAP 179 (283)
Q Consensus 164 ~~~~~~v~~~i~i~~p 179 (283)
. |.+++.+.+.
T Consensus 136 ~-----v~~iv~LDPa 146 (275)
T cd00707 136 K-----LGRITGLDPA 146 (275)
T ss_pred c-----cceeEEecCC
Confidence 5 9999998654
No 67
>PRK10566 esterase; Provisional
Probab=99.06 E-value=1.3e-09 Score=91.40 Aligned_cols=77 Identities=18% Similarity=0.191 Sum_probs=54.3
Q ss_pred HHHHHHHHHhCCc-ccCCCcCcCCCCCCCCC-Ccc-------hHHHHHHHHHHHHHHHHc--CCCCEEEEEeCcccHHHH
Q psy4395 87 FSYIAAALVGLGY-QRDLSMRGAPYDFRKAP-NEN-------QEYFANFKALIEETYDLN--GGTPVVLVAHSMGSLMCL 155 (283)
Q Consensus 87 ~~~l~~~L~~~g~-~~~~d~~g~g~~~r~~~-~~~-------~~~~~~l~~~i~~~~~~~--~~~~v~lvgHSmGg~va~ 155 (283)
|..+++.|++.|| ++++|++|+|.+..... ... ....+++.++++.+.+.. ..+++.++||||||.+++
T Consensus 43 ~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al 122 (249)
T PRK10566 43 YSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTLRAAIREEGWLLDDRLAVGGASMGGMTAL 122 (249)
T ss_pred HHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHhcCCcCccceeEEeecccHHHHH
Confidence 4467889999999 89999999985321111 111 123456666677665542 245899999999999999
Q ss_pred HHHHcCCh
Q psy4395 156 YFLQRQSS 163 (283)
Q Consensus 156 ~~~~~~~~ 163 (283)
.++...|+
T Consensus 123 ~~~~~~~~ 130 (249)
T PRK10566 123 GIMARHPW 130 (249)
T ss_pred HHHHhCCC
Confidence 99888776
No 68
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=99.06 E-value=3.5e-10 Score=94.40 Aligned_cols=67 Identities=22% Similarity=0.284 Sum_probs=51.1
Q ss_pred chHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCChhHHhhhhcceEEecCCCCcchh
Q psy4395 119 NQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSSAWKSKFVRSLVSLAAPWGGSVK 185 (283)
Q Consensus 119 ~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~~~~~~~~v~~~i~i~~p~~g~~~ 185 (283)
......-|..+|..+.++++-.++.+|||||||+.+.+|+..+...-.-..+..+|+|++|+.|...
T Consensus 82 ~~~qa~wl~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~ 148 (255)
T PF06028_consen 82 YKKQAKWLKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILG 148 (255)
T ss_dssp HHHHHHHHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTC
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCcccc
Confidence 4456677899999999999888999999999999999999986543222248999999999998743
No 69
>KOG0616|consensus
Probab=99.04 E-value=5.2e-10 Score=92.67 Aligned_cols=85 Identities=28% Similarity=0.475 Sum_probs=67.5
Q ss_pred HHHHHHHhhhccccccCCCcccccccCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHHHHHh------------
Q psy4395 198 VEEYLKKMQTHYDAREAPNKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINE------------ 265 (283)
Q Consensus 198 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~~~~------------ 265 (283)
...++..+.+.+..+..........+++|+..+.+|.|+||+|.+++++.+|..||+|++++.++.+.
T Consensus 18 ~~~~l~~~~~~~~~~~~~~~~~~~~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~v 97 (355)
T KOG0616|consen 18 VKEFLDKAREDFPKKWANTPQNPYSLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRV 97 (355)
T ss_pred HHHHHHHHHHhhhhhhcCCCCCCcchhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHH
Confidence 34555555555554444444444788999999999999999999999999999999999999876432
Q ss_pred --cCCCcceeeeEEEEECC
Q psy4395 266 --RMTHQGMILAFTCYRNP 282 (283)
Q Consensus 266 --~~~h~~iv~l~~~~~~~ 282 (283)
.+.|||+|+|++.|.|.
T Consensus 98 L~~v~~PFlv~l~~t~~d~ 116 (355)
T KOG0616|consen 98 LKAVSHPFLVKLYGTFKDN 116 (355)
T ss_pred HhhccCceeEEEEEeeccC
Confidence 57799999999999875
No 70
>KOG1838|consensus
Probab=99.03 E-value=1.9e-09 Score=94.05 Aligned_cols=93 Identities=16% Similarity=0.281 Sum_probs=75.0
Q ss_pred hHHHHHHHHHhCCc-ccCCCcCcCCCCCCCCCC-cchHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCCh
Q psy4395 86 YFSYIAAALVGLGY-QRDLSMRGAPYDFRKAPN-ENQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSS 163 (283)
Q Consensus 86 ~~~~l~~~L~~~g~-~~~~d~~g~g~~~r~~~~-~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~~ 163 (283)
|...++..+.+.|| ++.++.||++.+--.++. -....-+|++++++.++++++..|...+|.||||.+...|+.+..+
T Consensus 142 YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtTpr~f~ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~ 221 (409)
T KOG1838|consen 142 YVRHLVHEAQRKGYRVVVFNHRGLGGSKLTTPRLFTAGWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGD 221 (409)
T ss_pred HHHHHHHHHHhCCcEEEEECCCCCCCCccCCCceeecCCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccC
Confidence 56789999999999 899999998765432322 2344568999999999999999999999999999999999888655
Q ss_pred hHHhhhhcceEEecCCCC
Q psy4395 164 AWKSKFVRSLVSLAAPWG 181 (283)
Q Consensus 164 ~~~~~~v~~~i~i~~p~~ 181 (283)
. ..+.+.++++.|+.
T Consensus 222 ~---~~l~~a~~v~~Pwd 236 (409)
T KOG1838|consen 222 N---TPLIAAVAVCNPWD 236 (409)
T ss_pred C---CCceeEEEEeccch
Confidence 3 13677788889975
No 71
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.03 E-value=1.7e-09 Score=97.38 Aligned_cols=90 Identities=11% Similarity=0.153 Sum_probs=64.8
Q ss_pred chHHHHHHHHHhCCc-ccCCCcCcCCCCCCCCCCcchHHHHHHHHHHHHHHHHc--CCCCEEEEEeCcccHHHHHHHHcC
Q psy4395 85 SYFSYIAAALVGLGY-QRDLSMRGAPYDFRKAPNENQEYFANFKALIEETYDLN--GGTPVVLVAHSMGSLMCLYFLQRQ 161 (283)
Q Consensus 85 ~~~~~l~~~L~~~g~-~~~~d~~g~g~~~r~~~~~~~~~~~~l~~~i~~~~~~~--~~~~v~lvgHSmGg~va~~~~~~~ 161 (283)
.+|..+++.|++.|| ++++|+||+|.+.+.... .+......++++.+.... ...++.++||||||.++..++...
T Consensus 209 ~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~~~--~d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~ 286 (414)
T PRK05077 209 DYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWKLT--QDSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLE 286 (414)
T ss_pred hhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCcc--ccHHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhC
Confidence 356678899999999 899999999977443211 111112234555544321 235899999999999999999888
Q ss_pred ChhHHhhhhcceEEecCCCC
Q psy4395 162 SSAWKSKFVRSLVSLAAPWG 181 (283)
Q Consensus 162 ~~~~~~~~v~~~i~i~~p~~ 181 (283)
|+. |+++|+++++..
T Consensus 287 p~r-----i~a~V~~~~~~~ 301 (414)
T PRK05077 287 PPR-----LKAVACLGPVVH 301 (414)
T ss_pred CcC-----ceEEEEECCccc
Confidence 876 999999988753
No 72
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.01 E-value=5e-10 Score=92.00 Aligned_cols=75 Identities=24% Similarity=0.342 Sum_probs=59.3
Q ss_pred ccCCCcCcCCCCCCC-CCCcchHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCChhHHhhhhcceEEecC
Q psy4395 100 QRDLSMRGAPYDFRK-APNENQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSSAWKSKFVRSLVSLAA 178 (283)
Q Consensus 100 ~~~~d~~g~g~~~r~-~~~~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~~~~~~~~v~~~i~i~~ 178 (283)
++.+|+||+|++... .........+++.+.++.+.+..+..+++++||||||.++..++..+|+. |+++|++++
T Consensus 3 vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~-----v~~lvl~~~ 77 (230)
T PF00561_consen 3 VILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPER-----VKKLVLISP 77 (230)
T ss_dssp EEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGG-----EEEEEEESE
T ss_pred EEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchh-----hcCcEEEee
Confidence 688999999988630 01122333566777777777777777899999999999999999999997 999999988
Q ss_pred C
Q psy4395 179 P 179 (283)
Q Consensus 179 p 179 (283)
+
T Consensus 78 ~ 78 (230)
T PF00561_consen 78 P 78 (230)
T ss_dssp S
T ss_pred e
Confidence 6
No 73
>KOG0605|consensus
Probab=99.01 E-value=5.9e-10 Score=98.95 Aligned_cols=65 Identities=28% Similarity=0.496 Sum_probs=57.6
Q ss_pred cccccCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHHHHHh--------------cCCCcceeeeEEEEECCC
Q psy4395 219 YRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINE--------------RMTHQGMILAFTCYRNPH 283 (283)
Q Consensus 219 ~~~~~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~~~~--------------~~~h~~iv~l~~~~~~~~ 283 (283)
.....+||.+.+.||+|+||.|++|+.+.||..||||++.|..+... ..++|+||+||++|||++
T Consensus 136 ~r~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~ 214 (550)
T KOG0605|consen 136 TRLSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKE 214 (550)
T ss_pred ccCCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCC
Confidence 35578999999999999999999999999999999999999765332 468999999999999974
No 74
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.00 E-value=1.3e-09 Score=103.33 Aligned_cols=74 Identities=15% Similarity=0.156 Sum_probs=57.3
Q ss_pred HHHHHHHHHhCCc-ccCCCcCcCCCC-CCCC----------C-------------CcchHHHHHHHHHHHHHH------H
Q psy4395 87 FSYIAAALVGLGY-QRDLSMRGAPYD-FRKA----------P-------------NENQEYFANFKALIEETY------D 135 (283)
Q Consensus 87 ~~~l~~~L~~~g~-~~~~d~~g~g~~-~r~~----------~-------------~~~~~~~~~l~~~i~~~~------~ 135 (283)
|..+++.|.+.|| ++++|++|||.+ |... . ..+..+..|+..+...+. .
T Consensus 465 ~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~ 544 (792)
T TIGR03502 465 ALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGA 544 (792)
T ss_pred HHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHHHHHHHHHHHHHhccccccc
Confidence 5588899999999 899999999976 5400 0 134667778877777776 2
Q ss_pred H------cCCCCEEEEEeCcccHHHHHHHHc
Q psy4395 136 L------NGGTPVVLVAHSMGSLMCLYFLQR 160 (283)
Q Consensus 136 ~------~~~~~v~lvgHSmGg~va~~~~~~ 160 (283)
. ++..||+++||||||++++.|+..
T Consensus 545 ~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 545 PLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred ccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 2 445799999999999999999875
No 75
>KOG0580|consensus
Probab=98.99 E-value=4.9e-10 Score=90.23 Aligned_cols=66 Identities=39% Similarity=0.870 Sum_probs=59.4
Q ss_pred cccccccCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHHHHHh--------------cCCCcceeeeEEEEECC
Q psy4395 217 KSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINE--------------RMTHQGMILAFTCYRNP 282 (283)
Q Consensus 217 ~~~~~~~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~~~~--------------~~~h~~iv~l~~~~~~~ 282 (283)
....|.+++|++.+.+|+|.||.||+++.+.++..+|+|++.|..+... .|+||||+++|+.|-|+
T Consensus 15 ~~~~~~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~ 94 (281)
T KOG0580|consen 15 ATKTWTLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDS 94 (281)
T ss_pred cccccchhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheecc
Confidence 3467889999999999999999999999999999999999999876432 68999999999999875
No 76
>PLN00021 chlorophyllase
Probab=98.90 E-value=8.4e-09 Score=89.21 Aligned_cols=87 Identities=11% Similarity=0.094 Sum_probs=56.3
Q ss_pred hHHHHHHHHHhCCc-ccCCCcCcCCCCCCCCCCcchHHHHHHHHHHHHHHHH----------cCCCCEEEEEeCcccHHH
Q psy4395 86 YFSYIAAALVGLGY-QRDLSMRGAPYDFRKAPNENQEYFANFKALIEETYDL----------NGGTPVVLVAHSMGSLMC 154 (283)
Q Consensus 86 ~~~~l~~~L~~~g~-~~~~d~~g~g~~~r~~~~~~~~~~~~l~~~i~~~~~~----------~~~~~v~lvgHSmGg~va 154 (283)
.|..+++.|++.|| ++++|+++++... . ....++..++++.+.+. ....++.++||||||.++
T Consensus 67 ~y~~l~~~Las~G~~VvapD~~g~~~~~--~----~~~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA 140 (313)
T PLN00021 67 FYSQLLQHIASHGFIVVAPQLYTLAGPD--G----TDEIKDAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTA 140 (313)
T ss_pred cHHHHHHHHHhCCCEEEEecCCCcCCCC--c----hhhHHHHHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHH
Confidence 36788999999999 8999998854210 1 11112222223322211 112479999999999999
Q ss_pred HHHHHcCChhHHhhhhcceEEecC
Q psy4395 155 LYFLQRQSSAWKSKFVRSLVSLAA 178 (283)
Q Consensus 155 ~~~~~~~~~~~~~~~v~~~i~i~~ 178 (283)
..++..+++......+.++|.+.+
T Consensus 141 ~~lA~~~~~~~~~~~v~ali~ldP 164 (313)
T PLN00021 141 FALALGKAAVSLPLKFSALIGLDP 164 (313)
T ss_pred HHHHhhccccccccceeeEEeecc
Confidence 999988775432234788887754
No 77
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.89 E-value=1.1e-08 Score=86.59 Aligned_cols=92 Identities=16% Similarity=0.253 Sum_probs=70.5
Q ss_pred chHHHHHHHHHhCCc-ccCCCcCcCCCCCCCCCC-cchHHHHHHHHHHHHHHHHcCCCCEEEEEeCccc-HHHHHHHHcC
Q psy4395 85 SYFSYIAAALVGLGY-QRDLSMRGAPYDFRKAPN-ENQEYFANFKALIEETYDLNGGTPVVLVAHSMGS-LMCLYFLQRQ 161 (283)
Q Consensus 85 ~~~~~l~~~L~~~g~-~~~~d~~g~g~~~r~~~~-~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg-~va~~~~~~~ 161 (283)
.|.+.+++.+.++|| ++.++.||++.+--..+. ......+|++.+++.+++..+..|+..||.|||| +++.++....
T Consensus 91 ~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~yh~G~t~D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa~ylgeeg 170 (345)
T COG0429 91 PYARGLMRALSRRGWLVVVFHFRGCSGEANTSPRLYHSGETEDIRFFLDWLKARFPPRPLYAVGFSLGGNMLANYLGEEG 170 (345)
T ss_pred HHHHHHHHHHHhcCCeEEEEecccccCCcccCcceecccchhHHHHHHHHHHHhCCCCceEEEEecccHHHHHHHHHhhc
Confidence 477899999999999 899999999976533332 3445569999999999998888899999999999 5555554443
Q ss_pred ChhHHhhhhcceEEecCCC
Q psy4395 162 SSAWKSKFVRSLVSLAAPW 180 (283)
Q Consensus 162 ~~~~~~~~v~~~i~i~~p~ 180 (283)
.+. .+.+.++++.|+
T Consensus 171 ~d~----~~~aa~~vs~P~ 185 (345)
T COG0429 171 DDL----PLDAAVAVSAPF 185 (345)
T ss_pred cCc----ccceeeeeeCHH
Confidence 222 367778888875
No 78
>KOG3724|consensus
Probab=98.86 E-value=1.9e-09 Score=99.44 Aligned_cols=72 Identities=22% Similarity=0.345 Sum_probs=47.2
Q ss_pred chHHHHHHHHHHHHHHHHcCC------CCEEEEEeCcccHHHHHHHHcCChhHHhhhhcceEEecCCCCcchhhHHHHhh
Q psy4395 119 NQEYFANFKALIEETYDLNGG------TPVVLVAHSMGSLMCLYFLQRQSSAWKSKFVRSLVSLAAPWGGSVKAVKVFAV 192 (283)
Q Consensus 119 ~~~~~~~l~~~i~~~~~~~~~------~~v~lvgHSmGg~va~~~~~~~~~~~~~~~v~~~i~i~~p~~g~~~~~~~~~~ 192 (283)
..+|..|....|..+++.... +.|+||||||||+||+..+..... .+..|..+|+.++|+..++.+++....
T Consensus 155 QtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~--~~~sVntIITlssPH~a~Pl~~D~~l~ 232 (973)
T KOG3724|consen 155 QTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNE--VQGSVNTIITLSSPHAAPPLPLDRFLL 232 (973)
T ss_pred HHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhh--ccchhhhhhhhcCcccCCCCCCcHHHH
Confidence 344444444444444443112 239999999999999988765222 123399999999999888877664443
No 79
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.86 E-value=1e-08 Score=89.74 Aligned_cols=64 Identities=31% Similarity=0.396 Sum_probs=53.3
Q ss_pred hHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCChhHHhhhhcceEEecCCCCcchhh
Q psy4395 120 QEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSSAWKSKFVRSLVSLAAPWGGSVKA 186 (283)
Q Consensus 120 ~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~~~~~~~~v~~~i~i~~p~~g~~~~ 186 (283)
....+.+.+.|+.+....+.+++.|+||||||.++++++...+.. ..|+.++++++|+.|+..+
T Consensus 107 ~~~~~ql~~~V~~~l~~~ga~~v~LigHS~GG~~~ry~~~~~~~~---~~V~~~~tl~tp~~Gt~~~ 170 (336)
T COG1075 107 AVRGEQLFAYVDEVLAKTGAKKVNLIGHSMGGLDSRYYLGVLGGA---NRVASVVTLGTPHHGTELA 170 (336)
T ss_pred cccHHHHHHHHHHHHhhcCCCceEEEeecccchhhHHHHhhcCcc---ceEEEEEEeccCCCCchhh
Confidence 334567778888888888888999999999999999999988732 2399999999999998765
No 80
>PRK07868 acyl-CoA synthetase; Validated
Probab=98.85 E-value=1.3e-08 Score=101.38 Aligned_cols=83 Identities=19% Similarity=0.266 Sum_probs=59.3
Q ss_pred HHHHHHHhCCc-ccCCCcCcCCCCCCC---CCCcchHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcC-Ch
Q psy4395 89 YIAAALVGLGY-QRDLSMRGAPYDFRK---APNENQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQ-SS 163 (283)
Q Consensus 89 ~l~~~L~~~g~-~~~~d~~g~g~~~r~---~~~~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~-~~ 163 (283)
.+++.|.+.|| ++++|+ | .+.+. ...+..+++..+.+.++.+.+.. ..+++++||||||.++..++..+ ++
T Consensus 90 s~v~~L~~~g~~v~~~d~-G--~~~~~~~~~~~~l~~~i~~l~~~l~~v~~~~-~~~v~lvG~s~GG~~a~~~aa~~~~~ 165 (994)
T PRK07868 90 GAVGILHRAGLDPWVIDF-G--SPDKVEGGMERNLADHVVALSEAIDTVKDVT-GRDVHLVGYSQGGMFCYQAAAYRRSK 165 (994)
T ss_pred cHHHHHHHCCCEEEEEcC-C--CCChhHcCccCCHHHHHHHHHHHHHHHHHhh-CCceEEEEEChhHHHHHHHHHhcCCC
Confidence 46788999999 899993 3 32221 11245566666666666665554 35899999999999998888754 44
Q ss_pred hHHhhhhcceEEecCCC
Q psy4395 164 AWKSKFVRSLVSLAAPW 180 (283)
Q Consensus 164 ~~~~~~v~~~i~i~~p~ 180 (283)
. |+++|++++|.
T Consensus 166 ~-----v~~lvl~~~~~ 177 (994)
T PRK07868 166 D-----IASIVTFGSPV 177 (994)
T ss_pred c-----cceEEEEeccc
Confidence 4 99999988884
No 81
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=98.84 E-value=2.7e-08 Score=81.55 Aligned_cols=85 Identities=14% Similarity=-0.021 Sum_probs=59.3
Q ss_pred HHHHhCCc-ccCCCcCcCCC-----CCCCCCC--cchHHHHHHHHHHHHHHHHcC--CCCEEEEEeCcccHHHHHHHHcC
Q psy4395 92 AALVGLGY-QRDLSMRGAPY-----DFRKAPN--ENQEYFANFKALIEETYDLNG--GTPVVLVAHSMGSLMCLYFLQRQ 161 (283)
Q Consensus 92 ~~L~~~g~-~~~~d~~g~g~-----~~r~~~~--~~~~~~~~l~~~i~~~~~~~~--~~~v~lvgHSmGg~va~~~~~~~ 161 (283)
..+.+.|| ++++|.+|++. +|..... .......++..+++.+.++++ ..+++|+||||||.++..++..+
T Consensus 37 ~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~ 116 (212)
T TIGR01840 37 AAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTY 116 (212)
T ss_pred HHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhC
Confidence 44456799 89999999752 2221110 112234567777887776643 24899999999999999999999
Q ss_pred ChhHHhhhhcceEEecCCCC
Q psy4395 162 SSAWKSKFVRSLVSLAAPWG 181 (283)
Q Consensus 162 ~~~~~~~~v~~~i~i~~p~~ 181 (283)
|+. +.+++.++++..
T Consensus 117 p~~-----~~~~~~~~g~~~ 131 (212)
T TIGR01840 117 PDV-----FAGGASNAGLPY 131 (212)
T ss_pred chh-----heEEEeecCCcc
Confidence 987 788887776543
No 82
>KOG0694|consensus
Probab=98.83 E-value=4.1e-09 Score=96.20 Aligned_cols=65 Identities=32% Similarity=0.501 Sum_probs=57.2
Q ss_pred cccccCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHHHHHh---------------cCCCcceeeeEEEEECCC
Q psy4395 219 YRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINE---------------RMTHQGMILAFTCYRNPH 283 (283)
Q Consensus 219 ~~~~~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~~~~---------------~~~h~~iv~l~~~~~~~~ 283 (283)
....+++|.+.+.+|+|+||.|++++.+.+++.||||+++|..++.+ .-+|||+++||.||||++
T Consensus 363 ~~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~ 442 (694)
T KOG0694|consen 363 GPLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKE 442 (694)
T ss_pred CcccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCC
Confidence 46788999999999999999999999999999999999999754321 237999999999999974
No 83
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.82 E-value=2.7e-08 Score=90.82 Aligned_cols=87 Identities=16% Similarity=0.138 Sum_probs=71.0
Q ss_pred HHHHHHHhCCc-ccCCCcCcCCCCCCCCCCcchHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHH----HHHcCCh
Q psy4395 89 YIAAALVGLGY-QRDLSMRGAPYDFRKAPNENQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLY----FLQRQSS 163 (283)
Q Consensus 89 ~l~~~L~~~g~-~~~~d~~g~g~~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~----~~~~~~~ 163 (283)
.++++|.++|+ |+.+|.+.-+.+.| ..++++|++.+.+.|+.+++..+.++|+++||||||.++.. +++.+++
T Consensus 238 SlVr~lv~qG~~VflIsW~nP~~~~r--~~~ldDYv~~i~~Ald~V~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~~ 315 (560)
T TIGR01839 238 SFVQYCLKNQLQVFIISWRNPDKAHR--EWGLSTYVDALKEAVDAVRAITGSRDLNLLGACAGGLTCAALVGHLQALGQL 315 (560)
T ss_pred hHHHHHHHcCCeEEEEeCCCCChhhc--CCCHHHHHHHHHHHHHHHHHhcCCCCeeEEEECcchHHHHHHHHHHHhcCCC
Confidence 78999999999 89998776443322 23578899999999999999988889999999999999886 6666664
Q ss_pred hHHhhhhcceEEecCCCC
Q psy4395 164 AWKSKFVRSLVSLAAPWG 181 (283)
Q Consensus 164 ~~~~~~v~~~i~i~~p~~ 181 (283)
. .|++++++++|.-
T Consensus 316 ~----~V~sltllatplD 329 (560)
T TIGR01839 316 R----KVNSLTYLVSLLD 329 (560)
T ss_pred C----ceeeEEeeecccc
Confidence 1 2999999998854
No 84
>KOG0595|consensus
Probab=98.78 E-value=1e-08 Score=88.54 Aligned_cols=62 Identities=23% Similarity=0.522 Sum_probs=54.0
Q ss_pred ccCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHHH-------------HHhcCCCcceeeeEEEEECCC
Q psy4395 222 QMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI-------------INERMTHQGMILAFTCYRNPH 283 (283)
Q Consensus 222 ~~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~-------------~~~~~~h~~iv~l~~~~~~~~ 283 (283)
...+|.+.+.+|.|+|++||+++++.++..||||.|.+..+ +...++|||||+|++|.++++
T Consensus 8 ~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~ 82 (429)
T KOG0595|consen 8 VVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDD 82 (429)
T ss_pred ccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCC
Confidence 35689999999999999999999999999999999998742 123689999999999999875
No 85
>KOG0592|consensus
Probab=98.77 E-value=5.8e-09 Score=92.91 Aligned_cols=64 Identities=34% Similarity=0.536 Sum_probs=57.2
Q ss_pred ccccCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHHHHHh--------------cC-CCcceeeeEEEEECCC
Q psy4395 220 RWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINE--------------RM-THQGMILAFTCYRNPH 283 (283)
Q Consensus 220 ~~~~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~~~~--------------~~-~h~~iv~l~~~~~~~~ 283 (283)
.....||.+++.+|.|+|++|++|+.+.+++.||+|++.|+.++++ .| .||+||+||..|||++
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~ 147 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEE 147 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeeccc
Confidence 3456899999999999999999999999999999999999877654 34 7999999999999974
No 86
>KOG0575|consensus
Probab=98.76 E-value=1.6e-08 Score=91.26 Aligned_cols=60 Identities=22% Similarity=0.432 Sum_probs=53.1
Q ss_pred CceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHHHH--------------HhcCCCcceeeeEEEEECCC
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEII--------------NERMTHQGMILAFTCYRNPH 283 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~~--------------~~~~~h~~iv~l~~~~~~~~ 283 (283)
..|...+.+|+|+|++||.+++..+|..||+|+|.|..+. ...|.|||||++|.+|||.+
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~ 91 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSN 91 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCC
Confidence 4699999999999999999999999999999999985432 23799999999999999974
No 87
>KOG0615|consensus
Probab=98.76 E-value=1.5e-08 Score=87.64 Aligned_cols=61 Identities=26% Similarity=0.439 Sum_probs=53.8
Q ss_pred cCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHHHHH------------------hcCCCcceeeeEEEEECCC
Q psy4395 223 MSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIIN------------------ERMTHQGMILAFTCYRNPH 283 (283)
Q Consensus 223 ~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~~~------------------~~~~h~~iv~l~~~~~~~~ 283 (283)
-+.|.+.+.+|.|+||.|.+|..++||+.||||+++++++.. .+++||+||++++.|+.++
T Consensus 171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d 249 (475)
T KOG0615|consen 171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD 249 (475)
T ss_pred cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence 356788899999999999999999999999999999876422 3799999999999999875
No 88
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=98.75 E-value=3.5e-08 Score=81.55 Aligned_cols=89 Identities=19% Similarity=0.225 Sum_probs=59.2
Q ss_pred HHHHHHHHHhCCc-ccCCCcCcCCCCCCCCCCcchHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCChhH
Q psy4395 87 FSYIAAALVGLGY-QRDLSMRGAPYDFRKAPNENQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSSAW 165 (283)
Q Consensus 87 ~~~l~~~L~~~g~-~~~~d~~g~g~~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~~~~ 165 (283)
|..+++.|....+ +++++.+|.+.+ .....+.++.+++ .++.+....+..|++|+|||+||.+|...|......
T Consensus 16 y~~la~~l~~~~~~v~~i~~~~~~~~-~~~~~si~~la~~---y~~~I~~~~~~gp~~L~G~S~Gg~lA~E~A~~Le~~- 90 (229)
T PF00975_consen 16 YRPLARALPDDVIGVYGIEYPGRGDD-EPPPDSIEELASR---YAEAIRARQPEGPYVLAGWSFGGILAFEMARQLEEA- 90 (229)
T ss_dssp GHHHHHHHTTTEEEEEEECSTTSCTT-SHEESSHHHHHHH---HHHHHHHHTSSSSEEEEEETHHHHHHHHHHHHHHHT-
T ss_pred HHHHHHhCCCCeEEEEEEecCCCCCC-CCCCCCHHHHHHH---HHHHhhhhCCCCCeeehccCccHHHHHHHHHHHHHh-
Confidence 6689999987634 788888887622 1122345555444 444444444445999999999999999998774332
Q ss_pred HhhhhcceEEecCCCC
Q psy4395 166 KSKFVRSLVSLAAPWG 181 (283)
Q Consensus 166 ~~~~v~~~i~i~~p~~ 181 (283)
...+..++++.++..
T Consensus 91 -G~~v~~l~liD~~~p 105 (229)
T PF00975_consen 91 -GEEVSRLILIDSPPP 105 (229)
T ss_dssp -T-SESEEEEESCSST
T ss_pred -hhccCceEEecCCCC
Confidence 223888999986543
No 89
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.73 E-value=6.9e-08 Score=79.67 Aligned_cols=72 Identities=31% Similarity=0.358 Sum_probs=52.3
Q ss_pred c-ccCCCcCcCCCCCCCCCCcchHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCChhHHhhhhcceEEec
Q psy4395 99 Y-QRDLSMRGAPYDFRKAPNENQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSSAWKSKFVRSLVSLA 177 (283)
Q Consensus 99 ~-~~~~d~~g~g~~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~~~~~~~~v~~~i~i~ 177 (283)
| ++.+|++|||.+. ........+.+++..+++ ..+..+++++||||||.++..++..+|+. +.++|+++
T Consensus 51 ~~~~~~d~~g~g~s~-~~~~~~~~~~~~~~~~~~----~~~~~~~~l~G~S~Gg~~~~~~~~~~p~~-----~~~~v~~~ 120 (282)
T COG0596 51 YRVIAPDLRGHGRSD-PAGYSLSAYADDLAALLD----ALGLEKVVLVGHSMGGAVALALALRHPDR-----VRGLVLIG 120 (282)
T ss_pred eEEEEecccCCCCCC-cccccHHHHHHHHHHHHH----HhCCCceEEEEecccHHHHHHHHHhcchh-----hheeeEec
Confidence 7 8899999999875 000112222444444444 34445799999999999999999999986 99999998
Q ss_pred CCC
Q psy4395 178 APW 180 (283)
Q Consensus 178 ~p~ 180 (283)
++.
T Consensus 121 ~~~ 123 (282)
T COG0596 121 PAP 123 (282)
T ss_pred CCC
Confidence 654
No 90
>KOG0585|consensus
Probab=98.72 E-value=1.9e-08 Score=88.43 Aligned_cols=65 Identities=25% Similarity=0.476 Sum_probs=57.2
Q ss_pred cccccCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHHHH-------------------------HhcCCCccee
Q psy4395 219 YRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEII-------------------------NERMTHQGMI 273 (283)
Q Consensus 219 ~~~~~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~~-------------------------~~~~~h~~iv 273 (283)
...++++|.+.+.+|.|+||.|.++++..++++||||++.|.+.. ..+++|||||
T Consensus 92 ~~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV 171 (576)
T KOG0585|consen 92 DRKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVV 171 (576)
T ss_pred cceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCee
Confidence 345678999999999999999999999999999999999987532 2379999999
Q ss_pred eeEEEEECCC
Q psy4395 274 LAFTCYRNPH 283 (283)
Q Consensus 274 ~l~~~~~~~~ 283 (283)
+|+++..||.
T Consensus 172 ~LiEvLDDP~ 181 (576)
T KOG0585|consen 172 KLIEVLDDPE 181 (576)
T ss_pred EEEEeecCcc
Confidence 9999999884
No 91
>PLN02442 S-formylglutathione hydrolase
Probab=98.69 E-value=1.7e-07 Score=80.33 Aligned_cols=54 Identities=17% Similarity=0.262 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCChhHHhhhhcceEEecCCC
Q psy4395 122 YFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSSAWKSKFVRSLVSLAAPW 180 (283)
Q Consensus 122 ~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~~~~~~~~v~~~i~i~~p~ 180 (283)
..+++...++.........+++|+||||||.+++.++..+|+. +++++++++..
T Consensus 125 ~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~-----~~~~~~~~~~~ 178 (283)
T PLN02442 125 VVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDK-----YKSVSAFAPIA 178 (283)
T ss_pred HHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchh-----EEEEEEECCcc
Confidence 3455666666654433446899999999999999999999987 78888876653
No 92
>KOG2624|consensus
Probab=98.66 E-value=6.6e-08 Score=85.53 Aligned_cols=90 Identities=23% Similarity=0.305 Sum_probs=71.1
Q ss_pred HHHHHHHhCCc-ccCCCcCcCCCCCCC---CCC--------cchH-HHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHH
Q psy4395 89 YIAAALVGLGY-QRDLSMRGAPYDFRK---APN--------ENQE-YFANFKALIEETYDLNGGTPVVLVAHSMGSLMCL 155 (283)
Q Consensus 89 ~l~~~L~~~g~-~~~~d~~g~g~~~r~---~~~--------~~~~-~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~ 155 (283)
.++-.|+++|| |+.-+.||-.|+++. ++. ++.+ -..||.+.|+.+.+..+.++++.||||.|+.+..
T Consensus 97 sLaf~LadaGYDVWLgN~RGn~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~f 176 (403)
T KOG2624|consen 97 SLAFLLADAGYDVWLGNNRGNTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFF 176 (403)
T ss_pred cHHHHHHHcCCceeeecCcCcccchhhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhhe
Confidence 45667899999 899999998777632 111 2333 2458999999999998888999999999999999
Q ss_pred HHHHcCChhHHhhhhcceEEecCCC
Q psy4395 156 YFLQRQSSAWKSKFVRSLVSLAAPW 180 (283)
Q Consensus 156 ~~~~~~~~~~~~~~v~~~i~i~~p~ 180 (283)
..+...|+-. +.|+.+++++++.
T Consensus 177 v~lS~~p~~~--~kI~~~~aLAP~~ 199 (403)
T KOG2624|consen 177 VMLSERPEYN--KKIKSFIALAPAA 199 (403)
T ss_pred ehhcccchhh--hhhheeeeecchh
Confidence 9999887753 4499999998753
No 93
>PRK11460 putative hydrolase; Provisional
Probab=98.65 E-value=1.7e-07 Score=77.81 Aligned_cols=52 Identities=13% Similarity=0.293 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHHcC--CCCEEEEEeCcccHHHHHHHHcCChhHHhhhhcceEEecCC
Q psy4395 123 FANFKALIEETYDLNG--GTPVVLVAHSMGSLMCLYFLQRQSSAWKSKFVRSLVSLAAP 179 (283)
Q Consensus 123 ~~~l~~~i~~~~~~~~--~~~v~lvgHSmGg~va~~~~~~~~~~~~~~~v~~~i~i~~p 179 (283)
.+.+.+.++.+.++.+ ..+|+++||||||.+++.++..+|+. +.++|.+++.
T Consensus 84 ~~~l~~~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~-----~~~vv~~sg~ 137 (232)
T PRK11460 84 MPTFIETVRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGL-----AGRVIAFSGR 137 (232)
T ss_pred HHHHHHHHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCc-----ceEEEEeccc
Confidence 3445555555554432 34799999999999999998888764 6667766543
No 94
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=98.65 E-value=4.1e-08 Score=77.37 Aligned_cols=54 Identities=26% Similarity=0.408 Sum_probs=38.0
Q ss_pred cchHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHH-HcCChhHHhhhhcceEEecCCCC
Q psy4395 118 ENQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFL-QRQSSAWKSKFVRSLVSLAAPWG 181 (283)
Q Consensus 118 ~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~-~~~~~~~~~~~v~~~i~i~~p~~ 181 (283)
..+.+.+.+.+.|..+ ..+++|||||+|++.++.++ ...... |.++++++++..
T Consensus 38 ~~~~W~~~l~~~i~~~-----~~~~ilVaHSLGc~~~l~~l~~~~~~~-----v~g~lLVAp~~~ 92 (171)
T PF06821_consen 38 DLDEWVQALDQAIDAI-----DEPTILVAHSLGCLTALRWLAEQSQKK-----VAGALLVAPFDP 92 (171)
T ss_dssp -HHHHHHHHHHCCHC------TTTEEEEEETHHHHHHHHHHHHTCCSS-----EEEEEEES--SC
T ss_pred CHHHHHHHHHHHHhhc-----CCCeEEEEeCHHHHHHHHHHhhccccc-----ccEEEEEcCCCc
Confidence 3555666666665543 23799999999999999999 555554 999999988754
No 95
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=98.63 E-value=1.4e-07 Score=80.37 Aligned_cols=36 Identities=22% Similarity=0.302 Sum_probs=31.3
Q ss_pred CCCEEEEEeCcccHHHHHHHHcCChhHHhhhhcceEEecCC
Q psy4395 139 GTPVVLVAHSMGSLMCLYFLQRQSSAWKSKFVRSLVSLAAP 179 (283)
Q Consensus 139 ~~~v~lvgHSmGg~va~~~~~~~~~~~~~~~v~~~i~i~~p 179 (283)
..++.++||||||.+++.++..+|+. +++++++++.
T Consensus 137 ~~~~~~~G~S~GG~~a~~~a~~~p~~-----~~~~~~~~~~ 172 (275)
T TIGR02821 137 GERQGITGHSMGGHGALVIALKNPDR-----FKSVSAFAPI 172 (275)
T ss_pred CCceEEEEEChhHHHHHHHHHhCccc-----ceEEEEECCc
Confidence 34899999999999999999999987 8888887654
No 96
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=98.60 E-value=3e-07 Score=77.87 Aligned_cols=92 Identities=17% Similarity=0.223 Sum_probs=63.8
Q ss_pred hHHHHHHHHHhC---Cc-ccCCCcCcCCCCCCC-------CCCcchHHHHHHHHHHHHHHHHc--CCCCEEEEEeCcccH
Q psy4395 86 YFSYIAAALVGL---GY-QRDLSMRGAPYDFRK-------APNENQEYFANFKALIEETYDLN--GGTPVVLVAHSMGSL 152 (283)
Q Consensus 86 ~~~~l~~~L~~~---g~-~~~~d~~g~g~~~r~-------~~~~~~~~~~~l~~~i~~~~~~~--~~~~v~lvgHSmGg~ 152 (283)
||..+++.|.+. .+ +++..+.||-.+... ..-+.++-++-..++|+...... +..+++|+|||+|+.
T Consensus 17 fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~~~~~~liLiGHSIGay 96 (266)
T PF10230_consen 17 FYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKNKPNVKLILIGHSIGAY 96 (266)
T ss_pred HHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhcCCCCcEEEEeCcHHHH
Confidence 677777777754 46 788889998644332 11245555555566666666644 567999999999999
Q ss_pred HHHHHHHcCChhHHhhhhcceEEecCC
Q psy4395 153 MCLYFLQRQSSAWKSKFVRSLVSLAAP 179 (283)
Q Consensus 153 va~~~~~~~~~~~~~~~v~~~i~i~~p 179 (283)
+++..+.+.++. ...|.+.+++-|.
T Consensus 97 i~levl~r~~~~--~~~V~~~~lLfPT 121 (266)
T PF10230_consen 97 IALEVLKRLPDL--KFRVKKVILLFPT 121 (266)
T ss_pred HHHHHHHhcccc--CCceeEEEEeCCc
Confidence 999999998811 1238888887543
No 97
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=98.59 E-value=1.1e-07 Score=88.92 Aligned_cols=84 Identities=17% Similarity=0.020 Sum_probs=64.5
Q ss_pred HHHHHHhCCc-ccCCCcCcCCCCCCCCCCcc-hHHHHHHHHHHHHHHHH-cCCCCEEEEEeCcccHHHHHHHHcCChhHH
Q psy4395 90 IAAALVGLGY-QRDLSMRGAPYDFRKAPNEN-QEYFANFKALIEETYDL-NGGTPVVLVAHSMGSLMCLYFLQRQSSAWK 166 (283)
Q Consensus 90 l~~~L~~~g~-~~~~d~~g~g~~~r~~~~~~-~~~~~~l~~~i~~~~~~-~~~~~v~lvgHSmGg~va~~~~~~~~~~~~ 166 (283)
....|+++|| ++.+|+||+|.+.... ... ....+|+.++|+.+.++ ....+|.++||||||.++..++...|+.
T Consensus 45 ~~~~l~~~Gy~vv~~D~RG~g~S~g~~-~~~~~~~~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~-- 121 (550)
T TIGR00976 45 EPAWFVAQGYAVVIQDTRGRGASEGEF-DLLGSDEAADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPA-- 121 (550)
T ss_pred cHHHHHhCCcEEEEEeccccccCCCce-EecCcccchHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCc--
Confidence 3467888999 8999999999764321 111 45678899999988765 2234899999999999999999988776
Q ss_pred hhhhcceEEecCC
Q psy4395 167 SKFVRSLVSLAAP 179 (283)
Q Consensus 167 ~~~v~~~i~i~~p 179 (283)
++++|..++.
T Consensus 122 ---l~aiv~~~~~ 131 (550)
T TIGR00976 122 ---LRAIAPQEGV 131 (550)
T ss_pred ---eeEEeecCcc
Confidence 8888876554
No 98
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.56 E-value=1.3e-07 Score=72.89 Aligned_cols=56 Identities=23% Similarity=0.323 Sum_probs=43.4
Q ss_pred chHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCChhHHhhhhcceEEecCCCCcch
Q psy4395 119 NQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSSAWKSKFVRSLVSLAAPWGGSV 184 (283)
Q Consensus 119 ~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~~~~~~~~v~~~i~i~~p~~g~~ 184 (283)
.+++.+.|.+.+..+ ..|++||+||+|+..+..++...... |.+++++++|..+.+
T Consensus 43 ~~dWi~~l~~~v~a~-----~~~~vlVAHSLGc~~v~h~~~~~~~~-----V~GalLVAppd~~~~ 98 (181)
T COG3545 43 LDDWIARLEKEVNAA-----EGPVVLVAHSLGCATVAHWAEHIQRQ-----VAGALLVAPPDVSRP 98 (181)
T ss_pred HHHHHHHHHHHHhcc-----CCCeEEEEecccHHHHHHHHHhhhhc-----cceEEEecCCCcccc
Confidence 566666666555543 23799999999999999999886554 999999999987664
No 99
>KOG0610|consensus
Probab=98.52 E-value=8.8e-08 Score=82.96 Aligned_cols=66 Identities=21% Similarity=0.363 Sum_probs=58.1
Q ss_pred ccccccCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHHHHHh--------------cCCCcceeeeEEEEECCC
Q psy4395 218 SYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINE--------------RMTHQGMILAFTCYRNPH 283 (283)
Q Consensus 218 ~~~~~~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~~~~--------------~~~h~~iv~l~~~~~~~~ 283 (283)
...+..+.|.+.+.+|.|.-|+||+++.+.++..+|||++.|..+..+ .++||++..||+.|++++
T Consensus 71 ~~~l~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~ 150 (459)
T KOG0610|consen 71 DGSLGLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDK 150 (459)
T ss_pred CCccCHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccc
Confidence 345677899999999999999999999999999999999999865422 589999999999999975
No 100
>KOG0690|consensus
Probab=98.51 E-value=1.8e-08 Score=84.88 Aligned_cols=66 Identities=30% Similarity=0.417 Sum_probs=58.1
Q ss_pred ccccccCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHHHHH--------------hcCCCcceeeeEEEEECCC
Q psy4395 218 SYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIIN--------------ERMTHQGMILAFTCYRNPH 283 (283)
Q Consensus 218 ~~~~~~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~~~--------------~~~~h~~iv~l~~~~~~~~ 283 (283)
....++++|...+.+|+|.||.|.+++.+.+++.||||+++|+-++. ++.+||++..|.++||+.+
T Consensus 162 ~~kvTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~d 241 (516)
T KOG0690|consen 162 KNKVTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQD 241 (516)
T ss_pred cceeccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCc
Confidence 45568999999999999999999999999999999999999875422 2678999999999999864
No 101
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=98.50 E-value=9.5e-07 Score=73.47 Aligned_cols=83 Identities=22% Similarity=0.270 Sum_probs=62.3
Q ss_pred HHHHHHHHHhCCc-ccCCCcCcCCCCCCCCCC--cchHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCCh
Q psy4395 87 FSYIAAALVGLGY-QRDLSMRGAPYDFRKAPN--ENQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSS 163 (283)
Q Consensus 87 ~~~l~~~L~~~g~-~~~~d~~g~g~~~r~~~~--~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~~ 163 (283)
|+.+.+.|.+.|+ ++.+++||+|.+...+.. +..+-..-+.++++.+... .+++++|||.|+-.|+.++..+|
T Consensus 51 FkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~l~i~---~~~i~~gHSrGcenal~la~~~~- 126 (297)
T PF06342_consen 51 FKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNALLDELGIK---GKLIFLGHSRGCENALQLAVTHP- 126 (297)
T ss_pred hhhhhhHHHHcCeEEEEeCCCCCCCCCCCcccccChHHHHHHHHHHHHHcCCC---CceEEEEeccchHHHHHHHhcCc-
Confidence 6678899999999 899999999976543322 2233334455666665432 48999999999999999999885
Q ss_pred hHHhhhhcceEEecCC
Q psy4395 164 AWKSKFVRSLVSLAAP 179 (283)
Q Consensus 164 ~~~~~~v~~~i~i~~p 179 (283)
..+++++++|
T Consensus 127 ------~~g~~lin~~ 136 (297)
T PF06342_consen 127 ------LHGLVLINPP 136 (297)
T ss_pred ------cceEEEecCC
Confidence 4589999875
No 102
>KOG0695|consensus
Probab=98.49 E-value=5.8e-08 Score=82.11 Aligned_cols=70 Identities=20% Similarity=0.357 Sum_probs=60.5
Q ss_pred cCCCcccccccCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHHH---------------HHhcCCCcceeeeEE
Q psy4395 213 EAPNKSYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI---------------INERMTHQGMILAFT 277 (283)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~---------------~~~~~~h~~iv~l~~ 277 (283)
......+.+.+.+|.+.+.+|+|+|..|.+++.++|.+.||||+++|+.+ ..+..+||++|.|+.
T Consensus 239 ~g~~~~~~l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhs 318 (593)
T KOG0695|consen 239 DGIKISQGLGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHS 318 (593)
T ss_pred cccccccccccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhh
Confidence 33345567788999999999999999999999999999999999998642 334678999999999
Q ss_pred EEECC
Q psy4395 278 CYRNP 282 (283)
Q Consensus 278 ~~~~~ 282 (283)
||||+
T Consensus 319 cfqte 323 (593)
T KOG0695|consen 319 CFQTE 323 (593)
T ss_pred hhccc
Confidence 99997
No 103
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=98.46 E-value=8.4e-07 Score=75.15 Aligned_cols=94 Identities=18% Similarity=0.206 Sum_probs=62.5
Q ss_pred cchHHHHHHHHHhCCc-ccCCCcCcCCCCCCCCCCcchHHHHHHHHHHHHHHHHc----CCCCEEEEEeCcccHHHHHHH
Q psy4395 84 GSYFSYIAAALVGLGY-QRDLSMRGAPYDFRKAPNENQEYFANFKALIEETYDLN----GGTPVVLVAHSMGSLMCLYFL 158 (283)
Q Consensus 84 ~~~~~~l~~~L~~~g~-~~~~d~~g~g~~~r~~~~~~~~~~~~l~~~i~~~~~~~----~~~~v~lvgHSmGg~va~~~~ 158 (283)
..|...|++.|...+| ++.+-+......|.. .+++.-++++.+.|+.++... +..+|+|+|||-|...+++|+
T Consensus 49 vpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~--~SL~~D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl 126 (303)
T PF08538_consen 49 VPYLPDLAEALEETGWSLFQVQLSSSYSGWGT--SSLDRDVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYL 126 (303)
T ss_dssp STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S----HHHHHHHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHH
T ss_pred CchHHHHHHHhccCCeEEEEEEecCccCCcCc--chhhhHHHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHH
Confidence 3578899999988899 776666554334433 246666889999999998873 456999999999999999999
Q ss_pred HcCChhHHhhhhcceEEecCC
Q psy4395 159 QRQSSAWKSKFVRSLVSLAAP 179 (283)
Q Consensus 159 ~~~~~~~~~~~v~~~i~i~~p 179 (283)
......-....|+++|+-++.
T Consensus 127 ~~~~~~~~~~~VdG~ILQApV 147 (303)
T PF08538_consen 127 SSPNPSPSRPPVDGAILQAPV 147 (303)
T ss_dssp HH-TT---CCCEEEEEEEEE-
T ss_pred hccCccccccceEEEEEeCCC
Confidence 885431112349999988764
No 104
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=98.45 E-value=4.6e-07 Score=80.82 Aligned_cols=54 Identities=15% Similarity=0.177 Sum_probs=42.1
Q ss_pred cchHHHHHHHHHHHHHHHHcCCCCEE-EEEeCcccHHHHHHHHcCChhHHhhhhcceEEecCCC
Q psy4395 118 ENQEYFANFKALIEETYDLNGGTPVV-LVAHSMGSLMCLYFLQRQSSAWKSKFVRSLVSLAAPW 180 (283)
Q Consensus 118 ~~~~~~~~l~~~i~~~~~~~~~~~v~-lvgHSmGg~va~~~~~~~~~~~~~~~v~~~i~i~~p~ 180 (283)
+..+.++++.++++. .+-.++. +|||||||++++.++.++|+. |+++|++++..
T Consensus 142 t~~d~~~~~~~ll~~----lgi~~~~~vvG~SmGG~ial~~a~~~P~~-----v~~lv~ia~~~ 196 (389)
T PRK06765 142 TILDFVRVQKELIKS----LGIARLHAVMGPSMGGMQAQEWAVHYPHM-----VERMIGVIGNP 196 (389)
T ss_pred cHHHHHHHHHHHHHH----cCCCCceEEEEECHHHHHHHHHHHHChHh-----hheEEEEecCC
Confidence 455556666666654 3455775 999999999999999999998 99999997643
No 105
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.45 E-value=7.1e-07 Score=72.67 Aligned_cols=63 Identities=22% Similarity=0.197 Sum_probs=51.7
Q ss_pred chHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCChhHHhhhhcceEEecCCCC
Q psy4395 119 NQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSSAWKSKFVRSLVSLAAPWG 181 (283)
Q Consensus 119 ~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~~~~~~~~v~~~i~i~~p~~ 181 (283)
..++..-++.++..+.++++-.++.+|||||||+-..+|+..+...-.-..+..+|.+++|+.
T Consensus 115 ~~~~s~wlk~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 115 GLDQSKWLKKAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred hhhHHHHHHHHHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 344567789999999999998899999999999999999888644322234899999999987
No 106
>KOG4667|consensus
Probab=98.44 E-value=1.1e-06 Score=69.99 Aligned_cols=89 Identities=15% Similarity=0.177 Sum_probs=67.4
Q ss_pred chHHHHHHHHHhCCc-ccCCCcCcCCCCCC-CCCCcchHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCC
Q psy4395 85 SYFSYIAAALVGLGY-QRDLSMRGAPYDFR-KAPNENQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQS 162 (283)
Q Consensus 85 ~~~~~l~~~L~~~g~-~~~~d~~g~g~~~r-~~~~~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~ 162 (283)
.++..++.+|++.|| ++.+|++|-|.+.. ..+.....-++||..+++.+...+ ..--+++|||=||.+++.|+..+.
T Consensus 49 ~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~Gn~~~eadDL~sV~q~~s~~n-r~v~vi~gHSkGg~Vvl~ya~K~~ 127 (269)
T KOG4667|consen 49 IIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYGNYNTEADDLHSVIQYFSNSN-RVVPVILGHSKGGDVVLLYASKYH 127 (269)
T ss_pred HHHHHHHHHHHhcCceEEEEEecCCCCcCCccccCcccchHHHHHHHHHHhccCc-eEEEEEEeecCccHHHHHHHHhhc
Confidence 468899999999999 99999999985432 112233444589999998887532 223468899999999999999988
Q ss_pred hhHHhhhhcceEEecCCC
Q psy4395 163 SAWKSKFVRSLVSLAAPW 180 (283)
Q Consensus 163 ~~~~~~~v~~~i~i~~p~ 180 (283)
+ |+-+|.+++-+
T Consensus 128 d------~~~viNcsGRy 139 (269)
T KOG4667|consen 128 D------IRNVINCSGRY 139 (269)
T ss_pred C------chheEEccccc
Confidence 7 77888776543
No 107
>KOG0611|consensus
Probab=98.39 E-value=5.4e-08 Score=84.23 Aligned_cols=60 Identities=28% Similarity=0.497 Sum_probs=53.5
Q ss_pred CceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHHHHHh--------------cCCCcceeeeEEEEECCC
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINE--------------RMTHQGMILAFTCYRNPH 283 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~~~~--------------~~~h~~iv~l~~~~~~~~ 283 (283)
-.|++...+|.|.||.|.+|.....|+.||+|.|+|+++..+ .|+|||||.+|++|++.+
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkd 126 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKD 126 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCc
Confidence 368888999999999999999999999999999999876433 789999999999999864
No 108
>PLN02606 palmitoyl-protein thioesterase
Probab=98.38 E-value=2.7e-06 Score=71.89 Aligned_cols=56 Identities=23% Similarity=0.214 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCCh-hHHhhhhcceEEecCCCCcc
Q psy4395 122 YFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSS-AWKSKFVRSLVSLAAPWGGS 183 (283)
Q Consensus 122 ~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~~-~~~~~~v~~~i~i~~p~~g~ 183 (283)
-++.+.+.|....+.. .-+++||+|.||+++|.++.+.|. . .|+.+|++++|+.|.
T Consensus 79 Qv~~vce~l~~~~~L~--~G~naIGfSQGglflRa~ierc~~~p----~V~nlISlggph~Gv 135 (306)
T PLN02606 79 QASIACEKIKQMKELS--EGYNIVAESQGNLVARGLIEFCDNAP----PVINYVSLGGPHAGV 135 (306)
T ss_pred HHHHHHHHHhcchhhc--CceEEEEEcchhHHHHHHHHHCCCCC----CcceEEEecCCcCCc
Confidence 3444444444433222 259999999999999999999876 2 399999999999885
No 109
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=98.37 E-value=2.5e-07 Score=75.74 Aligned_cols=88 Identities=23% Similarity=0.262 Sum_probs=63.6
Q ss_pred HHHHHHHHHhCCc-ccCCCcCcCC---CCCCCCCC--cchHHHHHHHHHHHHHHHHc--CCCCEEEEEeCcccHHHHHHH
Q psy4395 87 FSYIAAALVGLGY-QRDLSMRGAP---YDFRKAPN--ENQEYFANFKALIEETYDLN--GGTPVVLVAHSMGSLMCLYFL 158 (283)
Q Consensus 87 ~~~l~~~L~~~g~-~~~~d~~g~g---~~~r~~~~--~~~~~~~~l~~~i~~~~~~~--~~~~v~lvgHSmGg~va~~~~ 158 (283)
|......|+++|| |+.+|.||.+ .+|+.... .....++|+.+.++.+.++. ...+|.++|||+||.++..++
T Consensus 3 f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~ 82 (213)
T PF00326_consen 3 FNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAA 82 (213)
T ss_dssp -SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHH
T ss_pred eeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhh
Confidence 4466788999999 8999999965 34433221 23456788889999887763 224899999999999999999
Q ss_pred HcCChhHHhhhhcceEEecCC
Q psy4395 159 QRQSSAWKSKFVRSLVSLAAP 179 (283)
Q Consensus 159 ~~~~~~~~~~~v~~~i~i~~p 179 (283)
..+|+. ++++|..++.
T Consensus 83 ~~~~~~-----f~a~v~~~g~ 98 (213)
T PF00326_consen 83 TQHPDR-----FKAAVAGAGV 98 (213)
T ss_dssp HHTCCG-----SSEEEEESE-
T ss_pred ccccee-----eeeeecccee
Confidence 988887 7777777654
No 110
>KOG0597|consensus
Probab=98.37 E-value=1e-07 Score=85.76 Aligned_cols=60 Identities=25% Similarity=0.479 Sum_probs=51.8
Q ss_pred cCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH--------H-----HHhcCCCcceeeeEEEEECC
Q psy4395 223 MSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE--------I-----INERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 223 ~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~--------~-----~~~~~~h~~iv~l~~~~~~~ 282 (283)
+++|.+...+|+|+||+||+++.|.+.+.||+|.+.|.. + +..++.|||||+++++||+.
T Consensus 1 me~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~ 73 (808)
T KOG0597|consen 1 MEQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETS 73 (808)
T ss_pred CcchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhccc
Confidence 356788889999999999999999999999999998742 1 22379999999999999986
No 111
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.35 E-value=1.2e-06 Score=72.76 Aligned_cols=61 Identities=16% Similarity=0.123 Sum_probs=43.7
Q ss_pred chHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCChh----HHhhhhcceEEecCC
Q psy4395 119 NQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSSA----WKSKFVRSLVSLAAP 179 (283)
Q Consensus 119 ~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~~~----~~~~~v~~~i~i~~p 179 (283)
.......+..+|+.+.+..+.++|+|++||||+.+.+.++...... .....+..+|++++-
T Consensus 72 a~~s~~~l~~~L~~L~~~~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApD 136 (233)
T PF05990_consen 72 ARFSGPALARFLRDLARAPGIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPD 136 (233)
T ss_pred HHHHHHHHHHHHHHHHhccCCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCC
Confidence 3445567888888888766778999999999999999887762111 112248888877653
No 112
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=98.34 E-value=1.9e-06 Score=75.41 Aligned_cols=66 Identities=36% Similarity=0.606 Sum_probs=55.7
Q ss_pred ccccccCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHHH---------HH-----hcCCCcceeeeEEEEECCC
Q psy4395 218 SYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI---------IN-----ERMTHQGMILAFTCYRNPH 283 (283)
Q Consensus 218 ~~~~~~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~---------~~-----~~~~h~~iv~l~~~~~~~~ 283 (283)
...+...+|.+.+.+|.|+||.||+++.+.+++.||+|++.+..+ .+ ..++||||++++++|++++
T Consensus 12 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 91 (329)
T PTZ00263 12 TSSWKLSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDEN 91 (329)
T ss_pred cCCCCchheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCC
Confidence 355667899999999999999999999999999999999986532 11 2689999999999998763
No 113
>KOG0600|consensus
Probab=98.30 E-value=3.7e-07 Score=81.00 Aligned_cols=61 Identities=26% Similarity=0.350 Sum_probs=52.1
Q ss_pred ccCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH-------------HHHhcCCCcceeeeEEEEECC
Q psy4395 222 QMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE-------------IINERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 222 ~~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~-------------~~~~~~~h~~iv~l~~~~~~~ 282 (283)
..+.|+.+..||+|.||.||+|++..+|.+||||.|+.+. .+.++++|||||+|.+....+
T Consensus 115 ~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~ 188 (560)
T KOG0600|consen 115 RADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSK 188 (560)
T ss_pred chHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEec
Confidence 3567888999999999999999999999999999998642 244589999999999877653
No 114
>KOG1035|consensus
Probab=98.28 E-value=2.1e-07 Score=90.21 Aligned_cols=58 Identities=28% Similarity=0.431 Sum_probs=49.8
Q ss_pred cCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechH-------HHHHh-----cCCCcceeeeEEEEE
Q psy4395 223 MSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKV-------EIINE-----RMTHQGMILAFTCYR 280 (283)
Q Consensus 223 ~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~-------~~~~~-----~~~h~~iv~l~~~~~ 280 (283)
..||+....+|+|+||.|++++.+.+|+.||||.|... ++.++ +|+|||||++|.+|-
T Consensus 478 ~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWV 547 (1351)
T KOG1035|consen 478 LNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWV 547 (1351)
T ss_pred hhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhh
Confidence 45888899999999999999999999999999999854 23333 899999999998763
No 115
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=98.27 E-value=2.7e-06 Score=75.96 Aligned_cols=59 Identities=25% Similarity=0.370 Sum_probs=50.4
Q ss_pred ceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHHH--------------HHhcCCCcceeeeEEEEECCC
Q psy4395 225 DFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI--------------INERMTHQGMILAFTCYRNPH 283 (283)
Q Consensus 225 ~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~--------------~~~~~~h~~iv~l~~~~~~~~ 283 (283)
.|.+.+.||.|+||.||+++++.+++.||+|++.+..+ ....++||||++++++|++++
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~ 74 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKD 74 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCC
Confidence 57889999999999999999999999999999976432 112689999999999998763
No 116
>KOG0581|consensus
Probab=98.27 E-value=1.6e-06 Score=74.25 Aligned_cols=62 Identities=26% Similarity=0.339 Sum_probs=52.1
Q ss_pred cccCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechH-------HHHH-----hcCCCcceeeeEEEEECC
Q psy4395 221 WQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKV-------EIIN-----ERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 221 ~~~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~-------~~~~-----~~~~h~~iv~l~~~~~~~ 282 (283)
.+..+++....+|.|+.|+|++++++.|+..||+|.|... .+.+ .+.+|||||++|++|..+
T Consensus 76 i~~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~ 149 (364)
T KOG0581|consen 76 ISLSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSN 149 (364)
T ss_pred cCHHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeC
Confidence 4556888899999999999999999999999999999432 1222 256999999999999876
No 117
>KOG0659|consensus
Probab=98.26 E-value=3.5e-07 Score=75.10 Aligned_cols=59 Identities=22% Similarity=0.370 Sum_probs=48.9
Q ss_pred CceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHHH-------------HHhcCCCcceeeeEEEEECC
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI-------------INERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~-------------~~~~~~h~~iv~l~~~~~~~ 282 (283)
..|...+.+|+|.||.||++++..||+.||+|.|...+. ..+.++|||||.|.++|-..
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~ 73 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHK 73 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCC
Confidence 356677889999999999999999999999999975432 12368899999999998653
No 118
>KOG0032|consensus
Probab=98.25 E-value=2.3e-06 Score=76.06 Aligned_cols=60 Identities=32% Similarity=0.605 Sum_probs=52.1
Q ss_pred CceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHHHH--------------HhcCC-CcceeeeEEEEECCC
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEII--------------NERMT-HQGMILAFTCYRNPH 283 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~~--------------~~~~~-h~~iv~l~~~~~~~~ 283 (283)
..|.+.+.+|.|.||.|+.+..+.||+.+|+|+|.|.... .+.+. |||||.++++|++++
T Consensus 35 ~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~ 109 (382)
T KOG0032|consen 35 EKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPD 109 (382)
T ss_pred ccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCC
Confidence 4688889999999999999999999999999999886541 12566 999999999999974
No 119
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.24 E-value=8.3e-06 Score=68.15 Aligned_cols=88 Identities=19% Similarity=0.120 Sum_probs=59.6
Q ss_pred HHHHHHHHHhCCc-ccCCCcCcCCCCCCCCCCcchHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCChhH
Q psy4395 87 FSYIAAALVGLGY-QRDLSMRGAPYDFRKAPNENQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSSAW 165 (283)
Q Consensus 87 ~~~l~~~L~~~g~-~~~~d~~g~g~~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~~~~ 165 (283)
|..|+..|... . +++.+-+|.+..-+ ...++++. +...++.+++..+.-|++|+|||+||.+|...+.+-...
T Consensus 16 ~~~L~~~l~~~-~~v~~l~a~g~~~~~~-~~~~l~~~---a~~yv~~Ir~~QP~GPy~L~G~S~GG~vA~evA~qL~~~- 89 (257)
T COG3319 16 YAPLAAALGPL-LPVYGLQAPGYGAGEQ-PFASLDDM---AAAYVAAIRRVQPEGPYVLLGWSLGGAVAFEVAAQLEAQ- 89 (257)
T ss_pred HHHHHHHhccC-ceeeccccCccccccc-ccCCHHHH---HHHHHHHHHHhCCCCCEEEEeeccccHHHHHHHHHHHhC-
Confidence 56777777765 4 77777777653211 22344444 445566666666767999999999999999988773222
Q ss_pred HhhhhcceEEecCCCC
Q psy4395 166 KSKFVRSLVSLAAPWG 181 (283)
Q Consensus 166 ~~~~v~~~i~i~~p~~ 181 (283)
.+.|..++++.++..
T Consensus 90 -G~~Va~L~llD~~~~ 104 (257)
T COG3319 90 -GEEVAFLGLLDAVPP 104 (257)
T ss_pred -CCeEEEEEEeccCCC
Confidence 223899999987655
No 120
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=98.24 E-value=3.7e-06 Score=74.47 Aligned_cols=60 Identities=28% Similarity=0.428 Sum_probs=51.0
Q ss_pred CceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHHH--------------HHhcCCCcceeeeEEEEECCC
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI--------------INERMTHQGMILAFTCYRNPH 283 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~--------------~~~~~~h~~iv~l~~~~~~~~ 283 (283)
++|.+.+.+|.|+||.|++++++.+++.||+|++.+... ....++||||++++++|++++
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~ 74 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDEN 74 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCC
Confidence 368889999999999999999999999999999986431 112678999999999998763
No 121
>KOG2029|consensus
Probab=98.24 E-value=2e-06 Score=77.80 Aligned_cols=86 Identities=26% Similarity=0.334 Sum_probs=55.4
Q ss_pred cCCCcCcCCCCCCCCCC---cchHHHHHHHHHHHHHHHHc-C-CCCEEEEEeCcccHHHHHHHHcC-----ChhH-Hhhh
Q psy4395 101 RDLSMRGAPYDFRKAPN---ENQEYFANFKALIEETYDLN-G-GTPVVLVAHSMGSLMCLYFLQRQ-----SSAW-KSKF 169 (283)
Q Consensus 101 ~~~d~~g~g~~~r~~~~---~~~~~~~~l~~~i~~~~~~~-~-~~~v~lvgHSmGg~va~~~~~~~-----~~~~-~~~~ 169 (283)
++.+.+..-++||.-.. ...........+++.+.+.. + ++||+.|||||||+++...+... |+.- .-++
T Consensus 482 i~l~Y~Tsit~w~~~~p~e~~r~sl~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kN 561 (697)
T KOG2029|consen 482 IGLEYTTSITDWRARCPAEAHRRSLAARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKN 561 (697)
T ss_pred EEeecccchhhhcccCcccchhhHHHHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhcc
Confidence 44444444566764211 23334455556666665542 3 67999999999999998876652 2211 1245
Q ss_pred hcceEEecCCCCcchhh
Q psy4395 170 VRSLVSLAAPWGGSVKA 186 (283)
Q Consensus 170 v~~~i~i~~p~~g~~~~ 186 (283)
..++|.++.|+.|+..+
T Consensus 562 trGiiFls~PHrGS~lA 578 (697)
T KOG2029|consen 562 TRGIIFLSVPHRGSRLA 578 (697)
T ss_pred CCceEEEecCCCCCccc
Confidence 77899999999999776
No 122
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=98.22 E-value=4.4e-06 Score=74.46 Aligned_cols=59 Identities=25% Similarity=0.407 Sum_probs=50.2
Q ss_pred ceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHHH---------H-----HhcCCCcceeeeEEEEECCC
Q psy4395 225 DFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI---------I-----NERMTHQGMILAFTCYRNPH 283 (283)
Q Consensus 225 ~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~---------~-----~~~~~h~~iv~l~~~~~~~~ 283 (283)
+|.+.+.+|.|+||.||++..+.+++.||+|++.+... . ...++|||||+++++|++++
T Consensus 2 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~ 74 (377)
T cd05629 2 DFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQ 74 (377)
T ss_pred CceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC
Confidence 68889999999999999999999999999999976432 1 12579999999999998763
No 123
>PHA03212 serine/threonine kinase US3; Provisional
Probab=98.22 E-value=3.7e-06 Score=75.45 Aligned_cols=61 Identities=11% Similarity=0.153 Sum_probs=52.6
Q ss_pred ccCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHHHHH-----hcCCCcceeeeEEEEECC
Q psy4395 222 QMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIIN-----ERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 222 ~~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~~~-----~~~~h~~iv~l~~~~~~~ 282 (283)
....|.+.+.+|.|+||.||++.++.+++.||+|......+.+ ..++|||||+++++|+++
T Consensus 90 ~~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~ 155 (391)
T PHA03212 90 EKAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQRGGTATEAHILRAINHPSIIQLKGTFTYN 155 (391)
T ss_pred ccCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhhhhhHHHHHHHHhCCCCCCCCEeEEEEEC
Confidence 3457999999999999999999999999999999887654443 378999999999999865
No 124
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=98.20 E-value=4.9e-06 Score=73.81 Aligned_cols=59 Identities=27% Similarity=0.401 Sum_probs=50.5
Q ss_pred CceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHHH---------H-----HhcCCCcceeeeEEEEECC
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI---------I-----NERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~---------~-----~~~~~h~~iv~l~~~~~~~ 282 (283)
++|.+.+.+|.|+||.|++++++.+++.||+|++.+... . ...++||||++++++|+++
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~ 73 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDK 73 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecC
Confidence 368899999999999999999999999999999986431 1 1267899999999999876
No 125
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=98.20 E-value=4.6e-06 Score=65.32 Aligned_cols=88 Identities=17% Similarity=0.233 Sum_probs=70.2
Q ss_pred HHHHHHHHHhCCc-ccCCCcCcCCCCCCCCCCcchHHHHHHHHHHHHHHHHcCCCCE-EEEEeCcccHHHHHHHHcCChh
Q psy4395 87 FSYIAAALVGLGY-QRDLSMRGAPYDFRKAPNENQEYFANFKALIEETYDLNGGTPV-VLVAHSMGSLMCLYFLQRQSSA 164 (283)
Q Consensus 87 ~~~l~~~L~~~g~-~~~~d~~g~g~~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~v-~lvgHSmGg~va~~~~~~~~~~ 164 (283)
-..++..|.+.|| ++.+|+||.|.|...-..... -.+|..+.++.++.++++.++ .+.|.|.|+.|+..++.+.|+
T Consensus 49 v~~la~~l~~~G~atlRfNfRgVG~S~G~fD~GiG-E~~Da~aaldW~~~~hp~s~~~~l~GfSFGa~Ia~~la~r~~e- 126 (210)
T COG2945 49 VQTLARALVKRGFATLRFNFRGVGRSQGEFDNGIG-ELEDAAAALDWLQARHPDSASCWLAGFSFGAYIAMQLAMRRPE- 126 (210)
T ss_pred HHHHHHHHHhCCceEEeecccccccccCcccCCcc-hHHHHHHHHHHHHhhCCCchhhhhcccchHHHHHHHHHHhccc-
Confidence 4478899999999 899999999976432222222 247888999999999988887 678899999999999999887
Q ss_pred HHhhhhcceEEecCCCC
Q psy4395 165 WKSKFVRSLVSLAAPWG 181 (283)
Q Consensus 165 ~~~~~v~~~i~i~~p~~ 181 (283)
+..+|.+.+|..
T Consensus 127 -----~~~~is~~p~~~ 138 (210)
T COG2945 127 -----ILVFISILPPIN 138 (210)
T ss_pred -----ccceeeccCCCC
Confidence 577888877654
No 126
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=98.20 E-value=5.5e-06 Score=73.79 Aligned_cols=59 Identities=24% Similarity=0.398 Sum_probs=50.6
Q ss_pred CceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHHH--------------HHhcCCCcceeeeEEEEECC
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI--------------INERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~--------------~~~~~~h~~iv~l~~~~~~~ 282 (283)
++|.+.+.+|.|+||.|++++.+.+++.||+|++.+... ....++||||++++++|+++
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~ 73 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDK 73 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcC
Confidence 368899999999999999999999999999999976432 11268999999999999875
No 127
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=98.19 E-value=2.1e-06 Score=58.50 Aligned_cols=48 Identities=19% Similarity=0.299 Sum_probs=38.5
Q ss_pred cchHHHHHHHHHhCCc-ccCCCcCcCCCCC--CCCCCcchHHHHHHHHHHH
Q psy4395 84 GSYFSYIAAALVGLGY-QRDLSMRGAPYDF--RKAPNENQEYFANFKALIE 131 (283)
Q Consensus 84 ~~~~~~l~~~L~~~g~-~~~~d~~g~g~~~--r~~~~~~~~~~~~l~~~i~ 131 (283)
+..|..+++.|+++|| |+++|+||||.|. |....+++++.+|+..+|+
T Consensus 29 ~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 29 SGRYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred HHHHHHHHHHHHhCCCEEEEECCCcCCCCCCcccccCCHHHHHHHHHHHhC
Confidence 3458899999999999 9999999999875 3334467888888877764
No 128
>KOG2541|consensus
Probab=98.19 E-value=1e-05 Score=66.62 Aligned_cols=39 Identities=26% Similarity=0.349 Sum_probs=34.8
Q ss_pred CEEEEEeCcccHHHHHHHHcCChhHHhhhhcceEEecCCCCcc
Q psy4395 141 PVVLVAHSMGSLMCLYFLQRQSSAWKSKFVRSLVSLAAPWGGS 183 (283)
Q Consensus 141 ~v~lvgHSmGg~va~~~~~~~~~~~~~~~v~~~i~i~~p~~g~ 183 (283)
-+++||.|.||+++|.++...+.. .|..+|++++|+.|.
T Consensus 93 Gynivg~SQGglv~Raliq~cd~p----pV~n~ISL~gPhaG~ 131 (296)
T KOG2541|consen 93 GYNIVGYSQGGLVARALIQFCDNP----PVKNFISLGGPHAGI 131 (296)
T ss_pred ceEEEEEccccHHHHHHHHhCCCC----CcceeEeccCCcCCc
Confidence 599999999999999999987664 499999999999884
No 129
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.18 E-value=6.2e-06 Score=65.06 Aligned_cols=91 Identities=21% Similarity=0.200 Sum_probs=72.4
Q ss_pred hHHHHHHHHHhCCc-ccCCCcCcCCCCCCCCCCcchHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCChh
Q psy4395 86 YFSYIAAALVGLGY-QRDLSMRGAPYDFRKAPNENQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSSA 164 (283)
Q Consensus 86 ~~~~l~~~L~~~g~-~~~~d~~g~g~~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~~~ 164 (283)
.-+.+++.|+++|+ |+.+|-+-+-.+-| +-++...|+.++|+...++.+.++|+|||.|+|+=|.-....+.|+.
T Consensus 17 ~d~~~a~~l~~~G~~VvGvdsl~Yfw~~r----tP~~~a~Dl~~~i~~y~~~w~~~~vvLiGYSFGADvlP~~~nrLp~~ 92 (192)
T PF06057_consen 17 LDKQIAEALAKQGVPVVGVDSLRYFWSER----TPEQTAADLARIIRHYRARWGRKRVVLIGYSFGADVLPFIYNRLPAA 92 (192)
T ss_pred hhHHHHHHHHHCCCeEEEechHHHHhhhC----CHHHHHHHHHHHHHHHHHHhCCceEEEEeecCCchhHHHHHhhCCHH
Confidence 34689999999999 88887544332222 23667899999999999998889999999999999988888888887
Q ss_pred HHhhhhcceEEecCCCC
Q psy4395 165 WKSKFVRSLVSLAAPWG 181 (283)
Q Consensus 165 ~~~~~v~~~i~i~~p~~ 181 (283)
-+++ |..++++++...
T Consensus 93 ~r~~-v~~v~Ll~p~~~ 108 (192)
T PF06057_consen 93 LRAR-VAQVVLLSPSTT 108 (192)
T ss_pred HHhh-eeEEEEeccCCc
Confidence 5554 999998876543
No 130
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=98.18 E-value=5.8e-06 Score=73.83 Aligned_cols=58 Identities=26% Similarity=0.406 Sum_probs=50.0
Q ss_pred ceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHHH--------------HHhcCCCcceeeeEEEEECC
Q psy4395 225 DFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI--------------INERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 225 ~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~--------------~~~~~~h~~iv~l~~~~~~~ 282 (283)
.|.+.+.+|.|+||.|++++.+.+++.||+|++.+... ....++|||||+++++|+++
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~ 73 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDK 73 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeC
Confidence 57889999999999999999999999999999986432 11267899999999999876
No 131
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=98.18 E-value=1.4e-06 Score=73.10 Aligned_cols=39 Identities=28% Similarity=0.381 Sum_probs=30.6
Q ss_pred CEEEEEeCcccHHHHHHHHcCChhHHhhhhcceEEecCCCCcc
Q psy4395 141 PVVLVAHSMGSLMCLYFLQRQSSAWKSKFVRSLVSLAAPWGGS 183 (283)
Q Consensus 141 ~v~lvgHSmGg~va~~~~~~~~~~~~~~~v~~~i~i~~p~~g~ 183 (283)
-+++||+|.||++.|.++.+.+.. .|+.+|++++|+.|-
T Consensus 81 G~~~IGfSQGgl~lRa~vq~c~~~----~V~nlISlggph~Gv 119 (279)
T PF02089_consen 81 GFNAIGFSQGGLFLRAYVQRCNDP----PVHNLISLGGPHMGV 119 (279)
T ss_dssp -EEEEEETCHHHHHHHHHHH-TSS-----EEEEEEES--TT-B
T ss_pred ceeeeeeccccHHHHHHHHHCCCC----CceeEEEecCccccc
Confidence 599999999999999999998754 399999999998874
No 132
>KOG0593|consensus
Probab=98.18 E-value=3e-07 Score=76.85 Aligned_cols=58 Identities=22% Similarity=0.462 Sum_probs=47.1
Q ss_pred CceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH-------H------HHhcCCCcceeeeEEEEEC
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE-------I------INERMTHQGMILAFTCYRN 281 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~-------~------~~~~~~h~~iv~l~~~~~~ 281 (283)
+.|+....+|+|+||.|+.++++.||+.||+|.....+ + ....+.|||+|.|.++|..
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrr 72 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRR 72 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHh
Confidence 45777889999999999999999999999999886431 1 1236899999999887753
No 133
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.15 E-value=3e-06 Score=68.27 Aligned_cols=76 Identities=18% Similarity=0.214 Sum_probs=58.4
Q ss_pred cccchHHHHHHHHHhCCc-ccCCCcCcCCCCCCCCC----CcchHH-HHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHH
Q psy4395 82 RVGSYFSYIAAALVGLGY-QRDLSMRGAPYDFRKAP----NENQEY-FANFKALIEETYDLNGGTPVVLVAHSMGSLMCL 155 (283)
Q Consensus 82 ~~~~~~~~l~~~L~~~g~-~~~~d~~g~g~~~r~~~----~~~~~~-~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~ 155 (283)
....||++++..++..|| |..+|+||.|.|--.+. ....++ ..|+.+.|+.+.+..++.|...|||||||.+.-
T Consensus 41 v~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~g 120 (281)
T COG4757 41 VGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDWARLDFPAALAALKKALPGHPLYFVGHSFGGQALG 120 (281)
T ss_pred cchhHhHHHHHHhhccCceEEEEecccccCCCccccccCccchhhhhhcchHHHHHHHHhhCCCCceEEeeccccceeec
Confidence 345678999999999999 89999999986632221 122333 457899999998877888999999999998765
Q ss_pred HH
Q psy4395 156 YF 157 (283)
Q Consensus 156 ~~ 157 (283)
.+
T Consensus 121 L~ 122 (281)
T COG4757 121 LL 122 (281)
T ss_pred cc
Confidence 44
No 134
>KOG0591|consensus
Probab=98.15 E-value=1.2e-07 Score=78.38 Aligned_cols=62 Identities=18% Similarity=0.387 Sum_probs=51.1
Q ss_pred ccccCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHHH-------------HHhcCCCcceeeeEE-EEEC
Q psy4395 220 RWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI-------------INERMTHQGMILAFT-CYRN 281 (283)
Q Consensus 220 ~~~~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~-------------~~~~~~h~~iv~l~~-~~~~ 281 (283)
..+..+|.+.+.+|+|+||.||.++...+|..+|.|.|+-..+ +...|+|||||++|+ .|.+
T Consensus 15 ~~~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~ 90 (375)
T KOG0591|consen 15 QKTLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIE 90 (375)
T ss_pred cccHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhc
Confidence 4467789999999999999999999999999999999973321 223799999999988 5543
No 135
>KOG0586|consensus
Probab=98.15 E-value=3.7e-06 Score=76.33 Aligned_cols=61 Identities=21% Similarity=0.404 Sum_probs=53.1
Q ss_pred ccCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHHH-------------HHhcCCCcceeeeEEEEECC
Q psy4395 222 QMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI-------------INERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 222 ~~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~-------------~~~~~~h~~iv~l~~~~~~~ 282 (283)
....|.+.+.||+|.|+.|.++.+..++..||||+|+|... +...++|||||+||.+++++
T Consensus 54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~ 127 (596)
T KOG0586|consen 54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETE 127 (596)
T ss_pred cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeec
Confidence 34578999999999999999999999999999999998532 22378999999999999876
No 136
>KOG4236|consensus
Probab=98.14 E-value=2.4e-06 Score=76.56 Aligned_cols=55 Identities=31% Similarity=0.527 Sum_probs=48.6
Q ss_pred eeeecccCCeeEEEEEEcCCCcEEEEEeechHHH-------------HHhcCCCcceeeeEEEEECCC
Q psy4395 229 GCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI-------------INERMTHQGMILAFTCYRNPH 283 (283)
Q Consensus 229 ~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~-------------~~~~~~h~~iv~l~~~~~~~~ 283 (283)
.+.+|.|.||+||-+.++.+|+.||+|+|+|.++ +.+++.||.||.|-.+|||++
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~e 636 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPE 636 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCc
Confidence 3478999999999999999999999999998542 345899999999999999985
No 137
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=98.13 E-value=8.3e-06 Score=71.39 Aligned_cols=60 Identities=27% Similarity=0.376 Sum_probs=50.5
Q ss_pred CceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHHH--------------HHhcCCCcceeeeEEEEECCC
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI--------------INERMTHQGMILAFTCYRNPH 283 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~--------------~~~~~~h~~iv~l~~~~~~~~ 283 (283)
++|.+.+.+|.|+||.|++++.+.+++.||+|++.+... ....++||||++++++|++++
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~ 74 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDEN 74 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCC
Confidence 368899999999999999999999999999999976322 112578999999999998763
No 138
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=98.12 E-value=1.1e-05 Score=64.38 Aligned_cols=45 Identities=22% Similarity=0.304 Sum_probs=30.9
Q ss_pred HHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCChhHHhhhhcceEEecCCC
Q psy4395 128 ALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSSAWKSKFVRSLVSLAAPW 180 (283)
Q Consensus 128 ~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~~~~~~~~v~~~i~i~~p~ 180 (283)
+.++.+.++.....+.|||+||||..|.+++.+++- .+ |++.|.+
T Consensus 47 ~~l~~~i~~~~~~~~~liGSSlGG~~A~~La~~~~~-------~a-vLiNPav 91 (187)
T PF05728_consen 47 AQLEQLIEELKPENVVLIGSSLGGFYATYLAERYGL-------PA-VLINPAV 91 (187)
T ss_pred HHHHHHHHhCCCCCeEEEEEChHHHHHHHHHHHhCC-------CE-EEEcCCC
Confidence 333444444444459999999999999999888753 34 6676544
No 139
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.11 E-value=3.2e-06 Score=68.89 Aligned_cols=92 Identities=16% Similarity=0.141 Sum_probs=58.5
Q ss_pred ccccchHHHHHHHHHhCCc-ccCCCcCcCCCCCCCCCC-cchHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHH
Q psy4395 81 VRVGSYFSYIAAALVGLGY-QRDLSMRGAPYDFRKAPN-ENQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFL 158 (283)
Q Consensus 81 ~~~~~~~~~l~~~L~~~g~-~~~~d~~g~g~~~r~~~~-~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~ 158 (283)
|.++.+|..+...|.. -. ..++.++|.+.-...+.. ++...++.+...|.. -...+|+.++||||||++|..++
T Consensus 17 GGsa~~fr~W~~~lp~-~iel~avqlPGR~~r~~ep~~~di~~Lad~la~el~~---~~~d~P~alfGHSmGa~lAfEvA 92 (244)
T COG3208 17 GGSASLFRSWSRRLPA-DIELLAVQLPGRGDRFGEPLLTDIESLADELANELLP---PLLDAPFALFGHSMGAMLAFEVA 92 (244)
T ss_pred CCCHHHHHHHHhhCCc-hhheeeecCCCcccccCCcccccHHHHHHHHHHHhcc---ccCCCCeeecccchhHHHHHHHH
Confidence 4456678888887775 34 678889998743322221 333333333333332 23456999999999999999998
Q ss_pred HcCChhHHhhhhcceEEecC
Q psy4395 159 QRQSSAWKSKFVRSLVSLAA 178 (283)
Q Consensus 159 ~~~~~~~~~~~v~~~i~i~~ 178 (283)
......+.. +.+++..++
T Consensus 93 rrl~~~g~~--p~~lfisg~ 110 (244)
T COG3208 93 RRLERAGLP--PRALFISGC 110 (244)
T ss_pred HHHHHcCCC--cceEEEecC
Confidence 875444322 566666654
No 140
>KOG0661|consensus
Probab=98.10 E-value=2.8e-07 Score=81.21 Aligned_cols=62 Identities=32% Similarity=0.432 Sum_probs=52.1
Q ss_pred ccCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHHH------------HHhcCC-CcceeeeEEEEECCC
Q psy4395 222 QMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI------------INERMT-HQGMILAFTCYRNPH 283 (283)
Q Consensus 222 ~~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~------------~~~~~~-h~~iv~l~~~~~~~~ 283 (283)
.++.|.+++.+|.|+||.|++|+.+.++..||+|.+.+.-. ...+++ |||||+|+++|.+++
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~ 82 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDND 82 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccC
Confidence 45678899999999999999999999999999999876421 123788 999999999988764
No 141
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=98.10 E-value=8.7e-06 Score=72.44 Aligned_cols=63 Identities=25% Similarity=0.451 Sum_probs=53.1
Q ss_pred cccCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHHH--------------HHhcCCCcceeeeEEEEECCC
Q psy4395 221 WQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI--------------INERMTHQGMILAFTCYRNPH 283 (283)
Q Consensus 221 ~~~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~--------------~~~~~~h~~iv~l~~~~~~~~ 283 (283)
....+|.+.+.+|.|+||.||+++.+.++..||+|++.+... ....++||||++++++|++++
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~ 116 (370)
T cd05596 40 MKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDK 116 (370)
T ss_pred CCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCC
Confidence 346789999999999999999999999999999999976431 112679999999999998763
No 142
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=98.10 E-value=1.3e-05 Score=68.54 Aligned_cols=60 Identities=17% Similarity=0.303 Sum_probs=50.9
Q ss_pred cCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH-------H-----HHhcCCCcceeeeEEEEECC
Q psy4395 223 MSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE-------I-----INERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 223 ~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~-------~-----~~~~~~h~~iv~l~~~~~~~ 282 (283)
+++|.+.+.+|.|+||.||++..+.++..||+|++.... . ....++||||++++++++++
T Consensus 4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 75 (288)
T cd07871 4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTE 75 (288)
T ss_pred cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCC
Confidence 568999999999999999999999999999999986421 1 22368999999999998875
No 143
>KOG1152|consensus
Probab=98.09 E-value=3.6e-06 Score=76.11 Aligned_cols=62 Identities=24% Similarity=0.551 Sum_probs=54.4
Q ss_pred ccCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHHHHHh----------------------cCCCcceeeeEEEE
Q psy4395 222 QMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINE----------------------RMTHQGMILAFTCY 279 (283)
Q Consensus 222 ~~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~~~~----------------------~~~h~~iv~l~~~~ 279 (283)
...+|...+.+|.|+||.|.+|.++.+.+.|.+|.|.|+++..+ +-.|+||+++++.|
T Consensus 559 k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfF 638 (772)
T KOG1152|consen 559 KFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFF 638 (772)
T ss_pred ccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhee
Confidence 45689999999999999999999999999999999999886432 23499999999999
Q ss_pred ECCC
Q psy4395 280 RNPH 283 (283)
Q Consensus 280 ~~~~ 283 (283)
||++
T Consensus 639 Eddd 642 (772)
T KOG1152|consen 639 EDDD 642 (772)
T ss_pred ecCC
Confidence 9975
No 144
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.09 E-value=3.4e-05 Score=58.70 Aligned_cols=91 Identities=20% Similarity=0.253 Sum_probs=57.8
Q ss_pred hHHHHHHHHHhCCc-ccCCCcCc--C-CCCCCCCCCcchHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcC
Q psy4395 86 YFSYIAAALVGLGY-QRDLSMRG--A-PYDFRKAPNENQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQ 161 (283)
Q Consensus 86 ~~~~l~~~L~~~g~-~~~~d~~g--~-g~~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~ 161 (283)
.+..++..|+..|+ +..++++= . .++-|.++......-......+.++++....-|+++=||||||-++-+.+...
T Consensus 31 ~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l~~gpLi~GGkSmGGR~aSmvade~ 110 (213)
T COG3571 31 SMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGLAEGPLIIGGKSMGGRVASMVADEL 110 (213)
T ss_pred HHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcccCCceeeccccccchHHHHHHHhh
Confidence 46788899999999 65554321 1 12323333321111122333444455443334899999999999999988876
Q ss_pred ChhHHhhhhcceEEecCCCC
Q psy4395 162 SSAWKSKFVRSLVSLAAPWG 181 (283)
Q Consensus 162 ~~~~~~~~v~~~i~i~~p~~ 181 (283)
... |+++++++-|+-
T Consensus 111 ~A~-----i~~L~clgYPfh 125 (213)
T COG3571 111 QAP-----IDGLVCLGYPFH 125 (213)
T ss_pred cCC-----cceEEEecCccC
Confidence 554 999999998864
No 145
>KOG0663|consensus
Probab=98.08 E-value=2.9e-06 Score=71.98 Aligned_cols=59 Identities=27% Similarity=0.340 Sum_probs=49.8
Q ss_pred ccCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH--------H-----HHhcCCCcceeeeEEEEE
Q psy4395 222 QMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE--------I-----INERMTHQGMILAFTCYR 280 (283)
Q Consensus 222 ~~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~--------~-----~~~~~~h~~iv~l~~~~~ 280 (283)
.+++|+....|+.|+||.||.++++.|+++||+|.+++++ . +..+.+|||||.+-++..
T Consensus 74 sv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVv 145 (419)
T KOG0663|consen 74 SVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVV 145 (419)
T ss_pred cHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEe
Confidence 4567888899999999999999999999999999998753 1 223678999999988764
No 146
>KOG0986|consensus
Probab=98.07 E-value=1.4e-06 Score=76.63 Aligned_cols=65 Identities=25% Similarity=0.267 Sum_probs=57.9
Q ss_pred cccccCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHHHHH--------------hcCCCcceeeeEEEEECCC
Q psy4395 219 YRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIIN--------------ERMTHQGMILAFTCYRNPH 283 (283)
Q Consensus 219 ~~~~~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~~~--------------~~~~h~~iv~l~~~~~~~~ 283 (283)
+..+..+|...+.+|+|+||.|+-++.+.||.+||+|.+.|..+.. ++++.+|||.|-++|+|++
T Consensus 180 qpvt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd 258 (591)
T KOG0986|consen 180 QPVTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKD 258 (591)
T ss_pred hhccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCC
Confidence 5567789999999999999999999999999999999999876543 3688999999999999985
No 147
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=98.07 E-value=1.4e-05 Score=70.67 Aligned_cols=59 Identities=27% Similarity=0.438 Sum_probs=50.2
Q ss_pred CceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHHHH--------------HhcCCCcceeeeEEEEECC
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEII--------------NERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~~--------------~~~~~h~~iv~l~~~~~~~ 282 (283)
++|.+.+.+|.|+||.|++++.+.+++.||+|++.+.... ...++||||++++++|+++
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~ 73 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDK 73 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcC
Confidence 3688899999999999999999999999999999754321 1267899999999999875
No 148
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=98.06 E-value=1.5e-05 Score=69.79 Aligned_cols=58 Identities=26% Similarity=0.500 Sum_probs=49.7
Q ss_pred ceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHHH---------HH-----hcCCCcceeeeEEEEECC
Q psy4395 225 DFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI---------IN-----ERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 225 ~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~---------~~-----~~~~h~~iv~l~~~~~~~ 282 (283)
+|.+.+.+|.|+||.||++..+.+++.||+|++.+... .. ..++||||++++++++++
T Consensus 2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~ 73 (333)
T cd05600 2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDD 73 (333)
T ss_pred CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcC
Confidence 68889999999999999999999999999999986532 11 257899999999999875
No 149
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=98.06 E-value=1.3e-05 Score=71.34 Aligned_cols=62 Identities=27% Similarity=0.476 Sum_probs=52.2
Q ss_pred ccCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHHH--------------HHhcCCCcceeeeEEEEECCC
Q psy4395 222 QMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI--------------INERMTHQGMILAFTCYRNPH 283 (283)
Q Consensus 222 ~~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~--------------~~~~~~h~~iv~l~~~~~~~~ 283 (283)
...+|.+.+.+|.|+||.|++++.+.+++.||+|++.+... ....++||||++++++|++++
T Consensus 41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~ 116 (370)
T cd05621 41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDK 116 (370)
T ss_pred CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC
Confidence 34689999999999999999999999999999999976322 122578999999999998763
No 150
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=98.06 E-value=1.6e-05 Score=68.49 Aligned_cols=61 Identities=25% Similarity=0.389 Sum_probs=51.4
Q ss_pred cCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH-------H-----HHhcCCCcceeeeEEEEECCC
Q psy4395 223 MSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE-------I-----INERMTHQGMILAFTCYRNPH 283 (283)
Q Consensus 223 ~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~-------~-----~~~~~~h~~iv~l~~~~~~~~ 283 (283)
.++|.+.+.+|.|+||.|++++.+.+++.||+|++.+.. . ....++||||+++++++++++
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 76 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKE 76 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCC
Confidence 467999999999999999999999999999999987421 1 123689999999999998763
No 151
>KOG0658|consensus
Probab=98.05 E-value=1.1e-05 Score=69.06 Aligned_cols=59 Identities=24% Similarity=0.422 Sum_probs=48.9
Q ss_pred CceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH-------HHHhcCCCcceeeeEEEEECC
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE-------IINERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~-------~~~~~~~h~~iv~l~~~~~~~ 282 (283)
-.+...+.+|.|+||.|+.+.-..++..+|+|.+-.++ -+...+.|||||+|..+|...
T Consensus 24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~knrEl~im~~l~HpNIV~L~~~f~~~ 89 (364)
T KOG0658|consen 24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYKNRELQIMRKLDHPNIVRLLYFFSSS 89 (364)
T ss_pred EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcCcHHHHHHHhcCCcCeeeEEEEEEec
Confidence 35777889999999999999999999999998875432 233489999999999999764
No 152
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=98.05 E-value=1.9e-05 Score=69.16 Aligned_cols=60 Identities=28% Similarity=0.393 Sum_probs=50.3
Q ss_pred CceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHHH--------------HHhcCCCcceeeeEEEEECCC
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI--------------INERMTHQGMILAFTCYRNPH 283 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~--------------~~~~~~h~~iv~l~~~~~~~~ 283 (283)
++|.+.+.+|+|+||.|++++.+.+++.||+|++.+... ....+.|+||++++++|++++
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~ 74 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDEN 74 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC
Confidence 368899999999999999999999999999999976321 112578999999999998763
No 153
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=98.04 E-value=1.5e-05 Score=70.93 Aligned_cols=62 Identities=29% Similarity=0.463 Sum_probs=52.4
Q ss_pred cccCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHHH--------------HHhcCCCcceeeeEEEEECC
Q psy4395 221 WQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI--------------INERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 221 ~~~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~--------------~~~~~~h~~iv~l~~~~~~~ 282 (283)
+...+|.+.+.+|.|+||.|++++++.+++.||+|++.+... ....++||||++++++|+++
T Consensus 40 ~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~ 115 (371)
T cd05622 40 MKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 115 (371)
T ss_pred cchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcC
Confidence 345789999999999999999999999999999999975332 12257899999999999875
No 154
>PLN02633 palmitoyl protein thioesterase family protein
Probab=98.04 E-value=3.8e-05 Score=65.17 Aligned_cols=56 Identities=20% Similarity=0.198 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCCh-hHHhhhhcceEEecCCCCcc
Q psy4395 122 YFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSS-AWKSKFVRSLVSLAAPWGGS 183 (283)
Q Consensus 122 ~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~~-~~~~~~v~~~i~i~~p~~g~ 183 (283)
-++.+.+.|....+.. .-+++||||.||+++|.++.+.|+ . .|+.+|++++|+.|.
T Consensus 78 Qve~vce~l~~~~~l~--~G~naIGfSQGGlflRa~ierc~~~p----~V~nlISlggph~Gv 134 (314)
T PLN02633 78 QAEIACEKVKQMKELS--QGYNIVGRSQGNLVARGLIEFCDGGP----PVYNYISLAGPHAGI 134 (314)
T ss_pred HHHHHHHHHhhchhhh--CcEEEEEEccchHHHHHHHHHCCCCC----CcceEEEecCCCCCe
Confidence 3344444444433222 249999999999999999999876 2 399999999998874
No 155
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=98.03 E-value=1.9e-05 Score=69.47 Aligned_cols=65 Identities=28% Similarity=0.409 Sum_probs=52.8
Q ss_pred ccccccCceeeeeeecccCCeeEEEEEEcCCC-cEEEEEeechHHH--------------HHhcCCCcceeeeEEEEECC
Q psy4395 218 SYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQ-IMIALKVLYKVEI--------------INERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 218 ~~~~~~~~~~~~~~lg~g~fg~v~~~~~~~~~-~~~A~K~i~~~~~--------------~~~~~~h~~iv~l~~~~~~~ 282 (283)
.......+|.+.+.+|.|+||.|+++..+.++ ..||+|.+.+... ....++||||++++++|+++
T Consensus 24 ~~~~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~ 103 (340)
T PTZ00426 24 KNKMKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDE 103 (340)
T ss_pred CCCCChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeC
Confidence 34556789999999999999999999987665 6899999976432 11268899999999999875
No 156
>KOG0582|consensus
Probab=98.03 E-value=1.8e-05 Score=69.65 Aligned_cols=64 Identities=20% Similarity=0.306 Sum_probs=54.2
Q ss_pred ccccCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHHHH-------Hh-----cCCCcceeeeEEEEECCC
Q psy4395 220 RWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEII-------NE-----RMTHQGMILAFTCYRNPH 283 (283)
Q Consensus 220 ~~~~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~~-------~~-----~~~h~~iv~l~~~~~~~~ 283 (283)
.....+|.+...+|.|..+.|++|+...++..||||+++.++.. ++ -++|||||++|++|..++
T Consensus 22 p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~ 97 (516)
T KOG0582|consen 22 PLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDS 97 (516)
T ss_pred CCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecc
Confidence 34567999999999999999999999999999999999976532 11 368999999999998653
No 157
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=98.00 E-value=7.7e-06 Score=70.16 Aligned_cols=58 Identities=29% Similarity=0.394 Sum_probs=48.8
Q ss_pred ceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHHH---------H-----HhcCCCcceeeeEEEEECC
Q psy4395 225 DFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI---------I-----NERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 225 ~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~---------~-----~~~~~h~~iv~l~~~~~~~ 282 (283)
+|.+.+.+|.|+||.|+++..+.+++.||+|++.+... . ...++||||++++++++++
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 73 (291)
T cd05612 2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQ 73 (291)
T ss_pred CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccC
Confidence 67888999999999999999999999999999975321 1 1268999999999887764
No 158
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=97.99 E-value=5.6e-05 Score=62.95 Aligned_cols=87 Identities=14% Similarity=0.092 Sum_probs=54.0
Q ss_pred HHHHHHHHHhCCc-ccCCCcCcCCCCCCCCCCcchHHHHHHHHHHHHHHH----Hc------CCCCEEEEEeCcccHHHH
Q psy4395 87 FSYIAAALVGLGY-QRDLSMRGAPYDFRKAPNENQEYFANFKALIEETYD----LN------GGTPVVLVAHSMGSLMCL 155 (283)
Q Consensus 87 ~~~l~~~L~~~g~-~~~~d~~g~g~~~r~~~~~~~~~~~~l~~~i~~~~~----~~------~~~~v~lvgHSmGg~va~ 155 (283)
|..+.+.+++.|| ++++|+...... .. ..-.+.+.++|+.+.+ .. .-.++.|.|||-||-+|.
T Consensus 33 Ys~ll~hvAShGyIVV~~d~~~~~~~--~~----~~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af 106 (259)
T PF12740_consen 33 YSQLLEHVASHGYIVVAPDLYSIGGP--DD----TDEVASAAEVIDWLAKGLESKLPLGVKPDFSKLALAGHSRGGKVAF 106 (259)
T ss_pred HHHHHHHHHhCceEEEEecccccCCC--Cc----chhHHHHHHHHHHHHhcchhhccccccccccceEEeeeCCCCHHHH
Confidence 7799999999999 899986653320 01 1112333333333222 11 123799999999999999
Q ss_pred HHHHcCChhHHhhhhcceEEecCC
Q psy4395 156 YFLQRQSSAWKSKFVRSLVSLAAP 179 (283)
Q Consensus 156 ~~~~~~~~~~~~~~v~~~i~i~~p 179 (283)
.++......-....++++|.+.+.
T Consensus 107 ~~al~~~~~~~~~~~~ali~lDPV 130 (259)
T PF12740_consen 107 AMALGNASSSLDLRFSALILLDPV 130 (259)
T ss_pred HHHhhhcccccccceeEEEEeccc
Confidence 888776221111238899988653
No 159
>KOG0583|consensus
Probab=97.99 E-value=2.1e-05 Score=69.79 Aligned_cols=62 Identities=31% Similarity=0.612 Sum_probs=52.1
Q ss_pred ccCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHHH----------------HHhcCC-CcceeeeEEEEECCC
Q psy4395 222 QMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI----------------INERMT-HQGMILAFTCYRNPH 283 (283)
Q Consensus 222 ~~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~----------------~~~~~~-h~~iv~l~~~~~~~~ 283 (283)
....|.+.+.+|.|+||.|+++.+..++..||+|++++..+ ..+.+. ||||++++++++++.
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 35689999999999999999999999999999998877411 112566 999999999999873
No 160
>KOG1552|consensus
Probab=97.97 E-value=1.7e-05 Score=65.15 Aligned_cols=72 Identities=17% Similarity=0.228 Sum_probs=58.4
Q ss_pred Cc-ccCCCcCcCCCCCCCCCCcchHHHHHHHHHHHHHHHHcC-CCCEEEEEeCcccHHHHHHHHcCChhHHhhhhcceEE
Q psy4395 98 GY-QRDLSMRGAPYDFRKAPNENQEYFANFKALIEETYDLNG-GTPVVLVAHSMGSLMCLYFLQRQSSAWKSKFVRSLVS 175 (283)
Q Consensus 98 g~-~~~~d~~g~g~~~r~~~~~~~~~~~~l~~~i~~~~~~~~-~~~v~lvgHSmGg~va~~~~~~~~~~~~~~~v~~~i~ 175 (283)
.+ ++++|..|.|.+...+. -...++|++++.|.++++++ .++++|.|||||...+..+|.+.| ++++|+
T Consensus 88 n~nv~~~DYSGyG~S~G~ps--E~n~y~Di~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~-------~~alVL 158 (258)
T KOG1552|consen 88 NCNVVSYDYSGYGRSSGKPS--ERNLYADIKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYP-------LAAVVL 158 (258)
T ss_pred cceEEEEecccccccCCCcc--cccchhhHHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcCC-------cceEEE
Confidence 46 79999999997644332 22567999999999999984 679999999999999999999887 478887
Q ss_pred ecC
Q psy4395 176 LAA 178 (283)
Q Consensus 176 i~~ 178 (283)
.++
T Consensus 159 ~SP 161 (258)
T KOG1552|consen 159 HSP 161 (258)
T ss_pred ecc
Confidence 754
No 161
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=97.97 E-value=2.2e-05 Score=80.80 Aligned_cols=83 Identities=17% Similarity=0.111 Sum_probs=58.5
Q ss_pred hHHHHHHHHHhCCc-ccCCCcCcCCCCCCCCCCcchHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHc---C
Q psy4395 86 YFSYIAAALVGLGY-QRDLSMRGAPYDFRKAPNENQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQR---Q 161 (283)
Q Consensus 86 ~~~~l~~~L~~~g~-~~~~d~~g~g~~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~---~ 161 (283)
.|..+++.|.. ++ +++++.+|++.. .....+.+..++++.+.++.+ .+..|++++||||||.++..++.. .
T Consensus 1083 ~~~~l~~~l~~-~~~v~~~~~~g~~~~-~~~~~~l~~la~~~~~~i~~~---~~~~p~~l~G~S~Gg~vA~e~A~~l~~~ 1157 (1296)
T PRK10252 1083 QFSVLSRYLDP-QWSIYGIQSPRPDGP-MQTATSLDEVCEAHLATLLEQ---QPHGPYHLLGYSLGGTLAQGIAARLRAR 1157 (1296)
T ss_pred HHHHHHHhcCC-CCcEEEEECCCCCCC-CCCCCCHHHHHHHHHHHHHhh---CCCCCEEEEEechhhHHHHHHHHHHHHc
Confidence 36678888865 45 888999998743 222235666666666666543 234589999999999999999885 3
Q ss_pred ChhHHhhhhcceEEecC
Q psy4395 162 SSAWKSKFVRSLVSLAA 178 (283)
Q Consensus 162 ~~~~~~~~v~~~i~i~~ 178 (283)
+.. +..++++++
T Consensus 1158 ~~~-----v~~l~l~~~ 1169 (1296)
T PRK10252 1158 GEE-----VAFLGLLDT 1169 (1296)
T ss_pred CCc-----eeEEEEecC
Confidence 443 888887764
No 162
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.96 E-value=1.8e-05 Score=61.23 Aligned_cols=64 Identities=9% Similarity=0.039 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCChhHHhhhhcceEEecCCCCcchh
Q psy4395 121 EYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSSAWKSKFVRSLVSLAAPWGGSVK 185 (283)
Q Consensus 121 ~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~~~~~~~~v~~~i~i~~p~~g~~~ 185 (283)
.....+...++....+++..+++++||||||.+|..++......- ...+..++++++|-.|...
T Consensus 9 ~~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~-~~~~~~~~~fg~p~~~~~~ 72 (153)
T cd00741 9 SLANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRG-LGRLVRVYTFGPPRVGNAA 72 (153)
T ss_pred HHHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhcc-CCCceEEEEeCCCcccchH
Confidence 344556667777666667789999999999999988877653310 1125678889998877643
No 163
>KOG0612|consensus
Probab=97.96 E-value=6.3e-07 Score=86.45 Aligned_cols=63 Identities=25% Similarity=0.432 Sum_probs=54.4
Q ss_pred cccCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHHHHHh--------------cCCCcceeeeEEEEECCC
Q psy4395 221 WQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINE--------------RMTHQGMILAFTCYRNPH 283 (283)
Q Consensus 221 ~~~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~~~~--------------~~~h~~iv~l~~~~~~~~ 283 (283)
+..+||.+.+.||+|+||-|.+++++.|++.||||+++|-.++.+ .-+.+.||.|+++|||++
T Consensus 72 l~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~ 148 (1317)
T KOG0612|consen 72 LKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDER 148 (1317)
T ss_pred CCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCcc
Confidence 345799999999999999999999999999999999999654322 346889999999999974
No 164
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=97.96 E-value=1.6e-05 Score=69.96 Aligned_cols=58 Identities=31% Similarity=0.521 Sum_probs=49.8
Q ss_pred ceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHHHH--------------HhcCCCcceeeeEEEEECC
Q psy4395 225 DFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEII--------------NERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 225 ~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~~--------------~~~~~h~~iv~l~~~~~~~ 282 (283)
+|.+.+.+|.|+||.||+++...+++.||+|++.+.... ...++||||++++++|+++
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~ 73 (350)
T cd05573 2 DFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDE 73 (350)
T ss_pred CceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecC
Confidence 688899999999999999999999999999999865321 1267899999999998875
No 165
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=97.96 E-value=4.5e-05 Score=66.91 Aligned_cols=86 Identities=19% Similarity=0.260 Sum_probs=67.3
Q ss_pred HHHHHHHhCCc-ccCCCcCcCCCCCCCCCCcchHHH-HHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCChhHH
Q psy4395 89 YIAAALVGLGY-QRDLSMRGAPYDFRKAPNENQEYF-ANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSSAWK 166 (283)
Q Consensus 89 ~l~~~L~~~g~-~~~~d~~g~g~~~r~~~~~~~~~~-~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~~~~~ 166 (283)
.++..|.+.|. ++.++.+.=.+. .....+++|+ +.+...|+.+.+..+.++|+++|||+||.++..++..++.+
T Consensus 130 s~V~~l~~~g~~vfvIsw~nPd~~--~~~~~~edYi~e~l~~aid~v~~itg~~~InliGyCvGGtl~~~ala~~~~k-- 205 (445)
T COG3243 130 SLVRWLLEQGLDVFVISWRNPDAS--LAAKNLEDYILEGLSEAIDTVKDITGQKDINLIGYCVGGTLLAAALALMAAK-- 205 (445)
T ss_pred cHHHHHHHcCCceEEEeccCchHh--hhhccHHHHHHHHHHHHHHHHHHHhCccccceeeEecchHHHHHHHHhhhhc--
Confidence 67889999998 777765432221 1223577887 88899999999888878999999999999999988887765
Q ss_pred hhhhcceEEecCCC
Q psy4395 167 SKFVRSLVSLAAPW 180 (283)
Q Consensus 167 ~~~v~~~i~i~~p~ 180 (283)
.|++++.+.+|+
T Consensus 206 --~I~S~T~lts~~ 217 (445)
T COG3243 206 --RIKSLTLLTSPV 217 (445)
T ss_pred --ccccceeeecch
Confidence 489998888774
No 166
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=97.93 E-value=4.3e-05 Score=66.85 Aligned_cols=60 Identities=27% Similarity=0.397 Sum_probs=50.4
Q ss_pred CceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHHH--------------HHhcCCCcceeeeEEEEECCC
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI--------------INERMTHQGMILAFTCYRNPH 283 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~--------------~~~~~~h~~iv~l~~~~~~~~ 283 (283)
++|.+.+.+|.|+||.|++++.+.+++.||+|++.+... ....++|+||+++++++++++
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~ 74 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDEN 74 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCC
Confidence 368889999999999999999999999999999976321 112578999999999998763
No 167
>KOG0608|consensus
Probab=97.92 E-value=6.9e-06 Score=75.21 Aligned_cols=66 Identities=20% Similarity=0.359 Sum_probs=56.9
Q ss_pred ccccccCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHHHHHh--------------cCCCcceeeeEEEEECCC
Q psy4395 218 SYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINE--------------RMTHQGMILAFTCYRNPH 283 (283)
Q Consensus 218 ~~~~~~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~~~~--------------~~~h~~iv~l~~~~~~~~ 283 (283)
+..+..+-|..++.||-|+||.|.+++...|..+||||.++|..++.+ ..+.+.||+||++|||.+
T Consensus 623 RaKMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkd 702 (1034)
T KOG0608|consen 623 RAKMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKD 702 (1034)
T ss_pred HhhccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCC
Confidence 445566779999999999999999999999999999999999876543 357899999999999975
No 168
>KOG4717|consensus
Probab=97.92 E-value=2.7e-06 Score=76.03 Aligned_cols=59 Identities=24% Similarity=0.388 Sum_probs=50.3
Q ss_pred CceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHHH--------HHh-----cCCCcceeeeEEEEECC
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI--------INE-----RMTHQGMILAFTCYRNP 282 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~--------~~~-----~~~h~~iv~l~~~~~~~ 282 (283)
.-|.+.+.+|+|-|..|.+|++--||..||+|+|.|.++ .++ -++|||||+||++..|.
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQ 89 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQ 89 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhccc
Confidence 357778899999999999999999999999999998753 222 35899999999998764
No 169
>KOG0594|consensus
Probab=97.92 E-value=9.6e-06 Score=69.15 Aligned_cols=60 Identities=28% Similarity=0.407 Sum_probs=51.2
Q ss_pred cCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH-------------HHHhcCCCcc-eeeeEEEEECC
Q psy4395 223 MSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE-------------IINERMTHQG-MILAFTCYRNP 282 (283)
Q Consensus 223 ~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~-------------~~~~~~~h~~-iv~l~~~~~~~ 282 (283)
+..|.....+|.|+||.||.++.+.+|+.||+|.++.+. ...+++.|+| ||+|++++.+.
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~ 83 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTS 83 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeec
Confidence 456777788999999999999999999999999998542 2345799999 99999998875
No 170
>KOG0662|consensus
Probab=97.91 E-value=4.5e-06 Score=64.94 Aligned_cols=58 Identities=17% Similarity=0.391 Sum_probs=47.3
Q ss_pred ceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH-------------HHHhcCCCcceeeeEEEEECC
Q psy4395 225 DFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE-------------IINERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 225 ~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~-------------~~~~~~~h~~iv~l~~~~~~~ 282 (283)
.|.....+|+|.||+||.++.+.++++||+|.++.+. ...+.+.|.|||+|+++...+
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsd 73 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSD 73 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccC
Confidence 4555678999999999999999999999999998642 123368999999999876543
No 171
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=97.89 E-value=5e-05 Score=65.64 Aligned_cols=60 Identities=18% Similarity=0.301 Sum_probs=50.8
Q ss_pred cCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH-------H-----HHhcCCCcceeeeEEEEECC
Q psy4395 223 MSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE-------I-----INERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 223 ~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~-------~-----~~~~~~h~~iv~l~~~~~~~ 282 (283)
+.+|.+.+.+|.|+||.||++..+.++..+|+|.+.... . ....++||||++++++++++
T Consensus 5 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 76 (309)
T cd07872 5 METYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTD 76 (309)
T ss_pred CCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeC
Confidence 567999999999999999999999999999999987421 1 12368999999999999865
No 172
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=97.89 E-value=4.9e-05 Score=65.39 Aligned_cols=60 Identities=18% Similarity=0.306 Sum_probs=51.0
Q ss_pred cCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH-------H-----HHhcCCCcceeeeEEEEECC
Q psy4395 223 MSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE-------I-----INERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 223 ~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~-------~-----~~~~~~h~~iv~l~~~~~~~ 282 (283)
+++|.+.+.+|.|+||.||++..+.++..||+|.+.... . ...+++||||++++++++++
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~ 76 (301)
T cd07873 5 LETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTE 76 (301)
T ss_pred ccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecC
Confidence 568999999999999999999999999999999986421 1 12378999999999999875
No 173
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=97.89 E-value=4e-05 Score=66.25 Aligned_cols=49 Identities=24% Similarity=0.240 Sum_probs=38.9
Q ss_pred HHHHHHcCCCCEE-EEEeCcccHHHHHHHHcCChhHHhhhhcceEEecCCCCcch
Q psy4395 131 EETYDLNGGTPVV-LVAHSMGSLMCLYFLQRQSSAWKSKFVRSLVSLAAPWGGSV 184 (283)
Q Consensus 131 ~~~~~~~~~~~v~-lvgHSmGg~va~~~~~~~~~~~~~~~v~~~i~i~~p~~g~~ 184 (283)
..+.+..+-+++. +||-||||+.++..+..+|+. |+.+|.++++..-++
T Consensus 137 ~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~-----V~~~i~ia~~~r~s~ 186 (368)
T COG2021 137 RLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDR-----VRRAIPIATAARLSA 186 (368)
T ss_pred HHHHHhcCcceEeeeeccChHHHHHHHHHHhChHH-----HhhhheecccccCCH
Confidence 4444455656766 999999999999999999998 999999987665443
No 174
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=97.87 E-value=4.6e-05 Score=66.55 Aligned_cols=58 Identities=28% Similarity=0.389 Sum_probs=49.8
Q ss_pred ceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHHH--------------HHhcCCCcceeeeEEEEECC
Q psy4395 225 DFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI--------------INERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 225 ~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~--------------~~~~~~h~~iv~l~~~~~~~ 282 (283)
+|.+.+.+|.|+||.||+++.+.+++.||+|++.+... ....++||||++++++|+++
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~ 73 (330)
T cd05601 2 DFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDK 73 (330)
T ss_pred CceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecC
Confidence 68889999999999999999999999999999986532 11257899999999999875
No 175
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=97.87 E-value=4.8e-05 Score=66.54 Aligned_cols=60 Identities=22% Similarity=0.288 Sum_probs=50.8
Q ss_pred cCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechH-------HHHH-----hcCCCcceeeeEEEEECC
Q psy4395 223 MSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKV-------EIIN-----ERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 223 ~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~-------~~~~-----~~~~h~~iv~l~~~~~~~ 282 (283)
.++|.+.+.+|.|+||.|++++++.++..+|+|.+... .+.+ ..++||||+++++++.++
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 75 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD 75 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEEC
Confidence 46899999999999999999999999999999998643 1222 368999999999998765
No 176
>KOG0588|consensus
Probab=97.84 E-value=1.6e-05 Score=73.09 Aligned_cols=61 Identities=26% Similarity=0.464 Sum_probs=53.2
Q ss_pred ccCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH--------------HHHhcCCCcceeeeEEEEECC
Q psy4395 222 QMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE--------------IINERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 222 ~~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~--------------~~~~~~~h~~iv~l~~~~~~~ 282 (283)
+...|.+++.+|.|+-|.|.+|++..||+.+|||+|.+.. ++.+-+.|||+++||+++++.
T Consensus 10 tiGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~ 84 (786)
T KOG0588|consen 10 TIGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENK 84 (786)
T ss_pred cccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccC
Confidence 4567899999999999999999999999999999999861 233357899999999999975
No 177
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=97.84 E-value=6.2e-05 Score=63.94 Aligned_cols=59 Identities=19% Similarity=0.210 Sum_probs=48.9
Q ss_pred CceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH-------H------HHhcCCCcceeeeEEEEECC
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE-------I------INERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~-------~------~~~~~~h~~iv~l~~~~~~~ 282 (283)
++|.+.+.+|.|+||.||++.++.+|..||+|.+.+.. + ..+.++||||+++++++.++
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~ 72 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFRE 72 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecC
Confidence 36888999999999999999999999999999886431 1 12356899999999998764
No 178
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=97.83 E-value=1.9e-05 Score=69.81 Aligned_cols=87 Identities=15% Similarity=0.176 Sum_probs=54.1
Q ss_pred hHHHHHHHHHhCCc-ccCCCcCcCCCCCCCCCC-cchHHHHHHHHHHHHHHHH--cCCCCEEEEEeCcccHHHHHHHHcC
Q psy4395 86 YFSYIAAALVGLGY-QRDLSMRGAPYDFRKAPN-ENQEYFANFKALIEETYDL--NGGTPVVLVAHSMGSLMCLYFLQRQ 161 (283)
Q Consensus 86 ~~~~l~~~L~~~g~-~~~~d~~g~g~~~r~~~~-~~~~~~~~l~~~i~~~~~~--~~~~~v~lvgHSmGg~va~~~~~~~ 161 (283)
++..+.+.|+.+|+ ++++|.+|.|++-+.... +..... .++++.+... -...+|.++|-||||.+|..++...
T Consensus 206 ~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~~D~~~l~---~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le 282 (411)
T PF06500_consen 206 LYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLTQDSSRLH---QAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALE 282 (411)
T ss_dssp GHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S-S-CCHHH---HHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCEEEEEccCCCcccccCCCCcCHHHHH---HHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhc
Confidence 35455567899999 899999999986432221 122222 3444444432 1224899999999999999988777
Q ss_pred ChhHHhhhhcceEEecCCC
Q psy4395 162 SSAWKSKFVRSLVSLAAPW 180 (283)
Q Consensus 162 ~~~~~~~~v~~~i~i~~p~ 180 (283)
+.+ |+++|+.+++.
T Consensus 283 ~~R-----lkavV~~Ga~v 296 (411)
T PF06500_consen 283 DPR-----LKAVVALGAPV 296 (411)
T ss_dssp TTT------SEEEEES---
T ss_pred ccc-----eeeEeeeCchH
Confidence 666 99999998874
No 179
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=97.82 E-value=6.5e-05 Score=66.46 Aligned_cols=60 Identities=20% Similarity=0.335 Sum_probs=50.1
Q ss_pred cCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechH--------HH-----HHhcCCCcceeeeEEEEECC
Q psy4395 223 MSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKV--------EI-----INERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 223 ~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~--------~~-----~~~~~~h~~iv~l~~~~~~~ 282 (283)
..+|.+.+.+|.|+||.|+++.++.++..||+|++.+. .+ ....++||||++++++|..+
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 92 (359)
T cd07876 20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQ 92 (359)
T ss_pred hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccC
Confidence 46899999999999999999999999999999998642 11 22368999999999998653
No 180
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=97.82 E-value=4.8e-05 Score=66.66 Aligned_cols=60 Identities=22% Similarity=0.321 Sum_probs=50.6
Q ss_pred cCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechH-------HHHH-----hcCCCcceeeeEEEEECC
Q psy4395 223 MSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKV-------EIIN-----ERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 223 ~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~-------~~~~-----~~~~h~~iv~l~~~~~~~ 282 (283)
.++|.+.+.+|.|+||.||++.++.++..+|+|.+... .+.+ ..++||||++++++|+++
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 75 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD 75 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEEC
Confidence 46889999999999999999999999999999987642 1222 268999999999999875
No 181
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=97.81 E-value=7.1e-05 Score=66.64 Aligned_cols=89 Identities=12% Similarity=0.069 Sum_probs=59.3
Q ss_pred HHHHHHHHHhCCc-ccCCCcCcCCCC-CCCCCCcchHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCChh
Q psy4395 87 FSYIAAALVGLGY-QRDLSMRGAPYD-FRKAPNENQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSSA 164 (283)
Q Consensus 87 ~~~l~~~L~~~g~-~~~~d~~g~g~~-~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~~~ 164 (283)
.+.+++.|.. |+ |+..|..-.+.. .......+++|++-+.+.|+.+ +. +++++|.||||..++.+++...+.
T Consensus 119 ~RS~V~~Ll~-g~dVYl~DW~~p~~vp~~~~~f~ldDYi~~l~~~i~~~----G~-~v~l~GvCqgG~~~laa~Al~a~~ 192 (406)
T TIGR01849 119 LRSTVEALLP-DHDVYITDWVNARMVPLSAGKFDLEDYIDYLIEFIRFL----GP-DIHVIAVCQPAVPVLAAVALMAEN 192 (406)
T ss_pred HHHHHHHHhC-CCcEEEEeCCCCCCCchhcCCCCHHHHHHHHHHHHHHh----CC-CCcEEEEchhhHHHHHHHHHHHhc
Confidence 3578899988 99 888875443311 1111224688887677777555 33 599999999999987776654322
Q ss_pred HHhhhhcceEEecCCCC
Q psy4395 165 WKSKFVRSLVSLAAPWG 181 (283)
Q Consensus 165 ~~~~~v~~~i~i~~p~~ 181 (283)
-....+++++++++|.-
T Consensus 193 ~~p~~~~sltlm~~PID 209 (406)
T TIGR01849 193 EPPAQPRSMTLMGGPID 209 (406)
T ss_pred CCCCCcceEEEEecCcc
Confidence 11112999999999854
No 182
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=97.81 E-value=2.2e-05 Score=66.93 Aligned_cols=58 Identities=22% Similarity=0.394 Sum_probs=48.9
Q ss_pred ceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH--------H-----HHhcCCCcceeeeEEEEECC
Q psy4395 225 DFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE--------I-----INERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 225 ~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~--------~-----~~~~~~h~~iv~l~~~~~~~ 282 (283)
+|.+.+.+|.|+||.|++++++.+++.||+|++.... + ....++||||++++++|+++
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 72 (287)
T cd07848 2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRR 72 (287)
T ss_pred CceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecC
Confidence 5888999999999999999999999999999987431 1 12368999999999998765
No 183
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=97.80 E-value=4.2e-05 Score=67.51 Aligned_cols=61 Identities=25% Similarity=0.416 Sum_probs=50.6
Q ss_pred ccCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechH-------HHHH-----hcCCCcceeeeEEEEECC
Q psy4395 222 QMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKV-------EIIN-----ERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 222 ~~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~-------~~~~-----~~~~h~~iv~l~~~~~~~ 282 (283)
...+|...+.+|.|+||.||++..+.+++.||+|++... .+.+ ..++|+||++++++|+++
T Consensus 72 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 144 (353)
T PLN00034 72 SLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHN 144 (353)
T ss_pred CHHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccC
Confidence 456788889999999999999999999999999998532 1222 268999999999998765
No 184
>PHA03209 serine/threonine kinase US3; Provisional
Probab=97.80 E-value=3.3e-05 Score=68.36 Aligned_cols=60 Identities=18% Similarity=0.166 Sum_probs=50.8
Q ss_pred cCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHHH-----HHhcCCCcceeeeEEEEECC
Q psy4395 223 MSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI-----INERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 223 ~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~-----~~~~~~h~~iv~l~~~~~~~ 282 (283)
...|.+.+.+|.|+||.||+++...++..||+|+..+... ...+++|||||++++++.++
T Consensus 65 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 129 (357)
T PHA03209 65 SLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKGTTLIEAMLLQNVNHPSVIRMKDTLVSG 129 (357)
T ss_pred hcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCccccHHHHHHHHhCCCCCCcChhheEEeC
Confidence 3469999999999999999999999999999998765432 34478999999999988764
No 185
>KOG0696|consensus
Probab=97.79 E-value=2.7e-06 Score=74.13 Aligned_cols=64 Identities=31% Similarity=0.481 Sum_probs=54.7
Q ss_pred ccccCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHHHHHh---------------cCCCcceeeeEEEEECCC
Q psy4395 220 RWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIINE---------------RMTHQGMILAFTCYRNPH 283 (283)
Q Consensus 220 ~~~~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~~~~---------------~~~h~~iv~l~~~~~~~~ 283 (283)
.....||.+...+|+|+||.|.++..+-+.++||+|+++|+-+++. .-.-|+++.|+.||||.|
T Consensus 345 ~i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmD 423 (683)
T KOG0696|consen 345 RIKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMD 423 (683)
T ss_pred ceeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhh
Confidence 4566789999999999999999999999999999999999755432 235899999999999864
No 186
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=97.79 E-value=5.3e-05 Score=62.17 Aligned_cols=86 Identities=19% Similarity=0.213 Sum_probs=56.5
Q ss_pred HHHHHHHHHhCCc-ccCCCcCcCCCCCCCCCCc------------chHHHHHHHHHHHHHHHHc--CCCCEEEEEeCccc
Q psy4395 87 FSYIAAALVGLGY-QRDLSMRGAPYDFRKAPNE------------NQEYFANFKALIEETYDLN--GGTPVVLVAHSMGS 151 (283)
Q Consensus 87 ~~~l~~~L~~~g~-~~~~d~~g~g~~~r~~~~~------------~~~~~~~l~~~i~~~~~~~--~~~~v~lvgHSmGg 151 (283)
.+.+++.|++.|| ++++|+++-.......... .+...+++.+.++.+.+.. ...+|.++|.|+||
T Consensus 30 ~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG 109 (218)
T PF01738_consen 30 IRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLRAQPEVDPGKIGVVGFCWGG 109 (218)
T ss_dssp HHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHHCTTTCEEEEEEEEEETHHH
T ss_pred HHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhccccCCCcEEEEEEecch
Confidence 4578999999999 8999987643300001000 1234456667777776653 23589999999999
Q ss_pred HHHHHHHHcCChhHHhhhhcceEEecC
Q psy4395 152 LMCLYFLQRQSSAWKSKFVRSLVSLAA 178 (283)
Q Consensus 152 ~va~~~~~~~~~~~~~~~v~~~i~i~~ 178 (283)
.++..++...+. +++.|..-+
T Consensus 110 ~~a~~~a~~~~~------~~a~v~~yg 130 (218)
T PF01738_consen 110 KLALLLAARDPR------VDAAVSFYG 130 (218)
T ss_dssp HHHHHHHCCTTT------SSEEEEES-
T ss_pred HHhhhhhhhccc------cceEEEEcC
Confidence 999999887733 788887655
No 187
>PTZ00036 glycogen synthase kinase; Provisional
Probab=97.77 E-value=7.2e-05 Score=68.19 Aligned_cols=59 Identities=25% Similarity=0.412 Sum_probs=48.9
Q ss_pred cCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH-------HHHhcCCCcceeeeEEEEEC
Q psy4395 223 MSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE-------IINERMTHQGMILAFTCYRN 281 (283)
Q Consensus 223 ~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~-------~~~~~~~h~~iv~l~~~~~~ 281 (283)
..+|.+.+.+|.|+||.||++..+.+++.||+|.+.+.. .....++|||||+++++|.+
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~Ei~il~~l~h~niv~l~~~~~~ 130 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQYKNRELLIMKNLNHINIIFLKDYYYT 130 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCcchHHHHHHHHHhcCCCCCcceeeeEee
Confidence 357999999999999999999999999999999886431 23347899999999887643
No 188
>KOG0589|consensus
Probab=97.75 E-value=7.7e-06 Score=72.59 Aligned_cols=61 Identities=20% Similarity=0.395 Sum_probs=52.1
Q ss_pred cCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHHH-------------HHhcCCCcceeeeEEEEECCC
Q psy4395 223 MSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI-------------INERMTHQGMILAFTCYRNPH 283 (283)
Q Consensus 223 ~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~-------------~~~~~~h~~iv~l~~~~~~~~ 283 (283)
++.|..++.+|+|+||.+++++++..+..|++|.|..... ...++.|||||.++++|..++
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~ 76 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDG 76 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCC
Confidence 5678899999999999999999999999999999986431 112699999999999998763
No 189
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=97.75 E-value=0.00012 Score=62.44 Aligned_cols=60 Identities=18% Similarity=0.321 Sum_probs=50.6
Q ss_pred cCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH-------H-----HHhcCCCcceeeeEEEEECC
Q psy4395 223 MSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE-------I-----INERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 223 ~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~-------~-----~~~~~~h~~iv~l~~~~~~~ 282 (283)
+++|.+.+.+|.|++|.||++..+.+++.||+|.+.... . ....++||||++++++++++
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 75 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTK 75 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecC
Confidence 468999999999999999999999999999999986421 1 12368999999999999875
No 190
>PRK10162 acetyl esterase; Provisional
Probab=97.74 E-value=0.00028 Score=61.49 Aligned_cols=87 Identities=11% Similarity=0.006 Sum_probs=54.4
Q ss_pred HHHHHHHHHh-CCc-ccCCCcCcCCCCCCCCCCcchHHHHHHHHHHHHHHH---HcC--CCCEEEEEeCcccHHHHHHHH
Q psy4395 87 FSYIAAALVG-LGY-QRDLSMRGAPYDFRKAPNENQEYFANFKALIEETYD---LNG--GTPVVLVAHSMGSLMCLYFLQ 159 (283)
Q Consensus 87 ~~~l~~~L~~-~g~-~~~~d~~g~g~~~r~~~~~~~~~~~~l~~~i~~~~~---~~~--~~~v~lvgHSmGg~va~~~~~ 159 (283)
+..+.+.|+. .|+ |+.+|+|..+.. ......+|+.+.++.+.+ +.+ ..+++|+|||+||.++..++.
T Consensus 100 ~~~~~~~la~~~g~~Vv~vdYrlape~------~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~ 173 (318)
T PRK10162 100 HDRIMRLLASYSGCTVIGIDYTLSPEA------RFPQAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASAL 173 (318)
T ss_pred hhHHHHHHHHHcCCEEEEecCCCCCCC------CCCCcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHH
Confidence 5567888876 588 899998876532 111223455555554433 222 348999999999999998876
Q ss_pred cCChhHH-hhhhcceEEecCC
Q psy4395 160 RQSSAWK-SKFVRSLVSLAAP 179 (283)
Q Consensus 160 ~~~~~~~-~~~v~~~i~i~~p 179 (283)
...+... ...+.++|++.+.
T Consensus 174 ~~~~~~~~~~~~~~~vl~~p~ 194 (318)
T PRK10162 174 WLRDKQIDCGKVAGVLLWYGL 194 (318)
T ss_pred HHHhcCCCccChhheEEECCc
Confidence 5321100 0137888887654
No 191
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.73 E-value=0.0003 Score=58.54 Aligned_cols=86 Identities=20% Similarity=0.238 Sum_probs=62.8
Q ss_pred chHHHHHHHHHhCCc-ccCCCcCcCCCCCCCC---C----------CcchHHHHHHHHHHHHHHHHc--CCCCEEEEEeC
Q psy4395 85 SYFSYIAAALVGLGY-QRDLSMRGAPYDFRKA---P----------NENQEYFANFKALIEETYDLN--GGTPVVLVAHS 148 (283)
Q Consensus 85 ~~~~~l~~~L~~~g~-~~~~d~~g~g~~~r~~---~----------~~~~~~~~~l~~~i~~~~~~~--~~~~v~lvgHS 148 (283)
.+.+.++++|+..|| ++++|+.+........ . ........|+.+.++.+..+. ...+|.++|.|
T Consensus 41 ~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC 120 (236)
T COG0412 41 PHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFC 120 (236)
T ss_pred hHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEc
Confidence 357899999999999 7999998743211100 0 112456678888888887653 23479999999
Q ss_pred cccHHHHHHHHcCChhHHhhhhcceEEe
Q psy4395 149 MGSLMCLYFLQRQSSAWKSKFVRSLVSL 176 (283)
Q Consensus 149 mGg~va~~~~~~~~~~~~~~~v~~~i~i 176 (283)
|||.++..++...|+ +++.+..
T Consensus 121 ~GG~~a~~~a~~~~~------v~a~v~f 142 (236)
T COG0412 121 MGGGLALLAATRAPE------VKAAVAF 142 (236)
T ss_pred ccHHHHHHhhcccCC------ccEEEEe
Confidence 999999999998874 7777765
No 192
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=97.71 E-value=0.00011 Score=63.47 Aligned_cols=58 Identities=21% Similarity=0.279 Sum_probs=48.8
Q ss_pred ceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechH-------HHHH-----hcCCCcceeeeEEEEECC
Q psy4395 225 DFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKV-------EIIN-----ERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 225 ~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~-------~~~~-----~~~~h~~iv~l~~~~~~~ 282 (283)
+|.+.+.+|.|+||.|+++.+..++..+|+|.+... .+.. ..++||||++++++|+++
T Consensus 2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 71 (308)
T cd06615 2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSD 71 (308)
T ss_pred CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeC
Confidence 688899999999999999999999999999998632 1212 268999999999999875
No 193
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=97.71 E-value=4.6e-05 Score=66.48 Aligned_cols=53 Identities=9% Similarity=0.086 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHH--cCCCCEEEEEeCcccHHHHHHHHcCChhHHhhhhcceEEecC
Q psy4395 123 FANFKALIEETYDL--NGGTPVVLVAHSMGSLMCLYFLQRQSSAWKSKFVRSLVSLAA 178 (283)
Q Consensus 123 ~~~l~~~i~~~~~~--~~~~~v~lvgHSmGg~va~~~~~~~~~~~~~~~v~~~i~i~~ 178 (283)
.+.+..+|..+... .+..+++|||||+|+-||-.+...... ...|.+++.+.+
T Consensus 131 g~~la~~l~~L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~---~~ki~rItgLDP 185 (331)
T PF00151_consen 131 GRQLAKFLSFLINNFGVPPENIHLIGHSLGAHVAGFAGKYLKG---GGKIGRITGLDP 185 (331)
T ss_dssp HHHHHHHHHHHHHHH---GGGEEEEEETCHHHHHHHHHHHTTT------SSEEEEES-
T ss_pred HHHHHHHHHHHHhhcCCChhHEEEEeeccchhhhhhhhhhccC---cceeeEEEecCc
Confidence 34456666666533 234589999999999999998888665 123888888854
No 194
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.70 E-value=9e-05 Score=56.22 Aligned_cols=63 Identities=16% Similarity=0.176 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCChhHHh-hhhcceEEecCCCCcch
Q psy4395 122 YFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSSAWKS-KFVRSLVSLAAPWGGSV 184 (283)
Q Consensus 122 ~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~~~~~~-~~v~~~i~i~~p~~g~~ 184 (283)
..+.+.+.++.+.++++..++++.||||||.+|..++......... ...-.+++.++|-.|..
T Consensus 46 ~~~~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l~~~~~~~~~~~~~~~fg~P~~~~~ 109 (140)
T PF01764_consen 46 LYDQILDALKELVEKYPDYSIVITGHSLGGALASLAAADLASHGPSSSSNVKCYTFGAPRVGNS 109 (140)
T ss_dssp HHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHHHHCTTTSTTTEEEEEES-S--BEH
T ss_pred HHHHHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhhhhcccccccceeeeecCCccccCH
Confidence 3455666777777777777899999999999998776653221110 11345666777766654
No 195
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=97.69 E-value=9.6e-05 Score=65.24 Aligned_cols=60 Identities=18% Similarity=0.320 Sum_probs=49.8
Q ss_pred cCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechH--------HH-----HHhcCCCcceeeeEEEEECC
Q psy4395 223 MSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKV--------EI-----INERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 223 ~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~--------~~-----~~~~~~h~~iv~l~~~~~~~ 282 (283)
..+|.+.+.+|.|+||.|+++.+..+++.+|+|.+.+. .. ....++||||++++++|..+
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 88 (355)
T cd07874 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQ 88 (355)
T ss_pred hhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecc
Confidence 46899999999999999999999999999999998642 11 12367999999999998653
No 196
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=97.68 E-value=8.4e-05 Score=63.18 Aligned_cols=58 Identities=24% Similarity=0.258 Sum_probs=48.3
Q ss_pred ceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechH-------HHHH-----hcCCCcceeeeEEEEECC
Q psy4395 225 DFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKV-------EIIN-----ERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 225 ~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~-------~~~~-----~~~~h~~iv~l~~~~~~~ 282 (283)
+|.+.+.+|.|+||.||++.+..+++.||+|.+.+. .+.+ ..++||||++++++|+++
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 71 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVE 71 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEEC
Confidence 577788999999999999999999999999998643 1212 257999999999998875
No 197
>PHA03211 serine/threonine kinase US3; Provisional
Probab=97.67 E-value=0.00012 Score=67.04 Aligned_cols=60 Identities=13% Similarity=0.167 Sum_probs=49.5
Q ss_pred cCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHHH-----HHhcCCCcceeeeEEEEECC
Q psy4395 223 MSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI-----INERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 223 ~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~-----~~~~~~h~~iv~l~~~~~~~ 282 (283)
...|.+.+.+|.|+||.||++.+..+++.||+|....... ...+++|||||++++++...
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~~~~~~E~~iL~~L~HpnIv~l~~~~~~~ 232 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWYASSVHEARLLRRLSHPAVLALLDVRVVG 232 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccccCHHHHHHHHHHCCCCCCCcEEEEEEEC
Confidence 4579999999999999999999999999999997643222 23478999999999987654
No 198
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=97.66 E-value=0.00016 Score=69.38 Aligned_cols=60 Identities=22% Similarity=0.427 Sum_probs=50.8
Q ss_pred cCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH---------HH-----HhcCCCcceeeeEEEEECC
Q psy4395 223 MSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE---------II-----NERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 223 ~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~---------~~-----~~~~~h~~iv~l~~~~~~~ 282 (283)
+.+|.+.+.+|.|.||.||++....+++.||+|++.+.. +. ...++||||++++.++++.
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~ 76 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSA 76 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEEC
Confidence 568999999999999999999999999999999997532 11 1257899999999988764
No 199
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=97.65 E-value=0.00017 Score=70.41 Aligned_cols=59 Identities=20% Similarity=0.433 Sum_probs=49.8
Q ss_pred CceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechH---------HHHH-----hcCCCcceeeeEEEEECC
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKV---------EIIN-----ERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~---------~~~~-----~~~~h~~iv~l~~~~~~~ 282 (283)
.+|.+.+.+|.|+||.|+++.+..+++.||+|++.+. .+.+ .+++||||++++++++++
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~ 74 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDG 74 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeC
Confidence 5789999999999999999999999999999998642 1112 268999999999998765
No 200
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=97.65 E-value=4.1e-05 Score=67.03 Aligned_cols=61 Identities=23% Similarity=0.388 Sum_probs=46.2
Q ss_pred ccCceeeeeeecccCCeeEEEEEEc-----CCCcEEEEEeechH-------HHHHh-----cC-CCcceeeeEEEEECC
Q psy4395 222 QMSDFEVGCPLGTGKFGHVYLAKEK-----TTQIMIALKVLYKV-------EIINE-----RM-THQGMILAFTCYRNP 282 (283)
Q Consensus 222 ~~~~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~A~K~i~~~-------~~~~~-----~~-~h~~iv~l~~~~~~~ 282 (283)
..++|.+.+.+|.|+||.||++... .++..||+|++... .+..+ .+ +|||||++++++.++
T Consensus 5 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 83 (338)
T cd05102 5 PRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKP 83 (338)
T ss_pred chhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCC
Confidence 3467899999999999999999752 44578999998642 12222 45 899999999987654
No 201
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=97.64 E-value=0.00018 Score=61.46 Aligned_cols=58 Identities=34% Similarity=0.545 Sum_probs=49.0
Q ss_pred ceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHHH--------------HHhcCCCcceeeeEEEEECC
Q psy4395 225 DFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI--------------INERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 225 ~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~--------------~~~~~~h~~iv~l~~~~~~~ 282 (283)
+|.+.+.+|.|++|.||++....+++.+|+|++.+... ....++||||+++++++.+.
T Consensus 2 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 73 (290)
T cd05580 2 DFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDD 73 (290)
T ss_pred ceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcC
Confidence 67889999999999999999999999999999975432 11267899999999998765
No 202
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=97.64 E-value=0.00021 Score=61.04 Aligned_cols=59 Identities=19% Similarity=0.317 Sum_probs=49.8
Q ss_pred CceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH-------H-----HHhcCCCcceeeeEEEEECC
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE-------I-----INERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~-------~-----~~~~~~h~~iv~l~~~~~~~ 282 (283)
.+|.+.+.+|.|+||.||++..+.++..||+|.+.... . ....++|+||++++++++++
T Consensus 5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~ 75 (291)
T cd07870 5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTK 75 (291)
T ss_pred ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecC
Confidence 57889999999999999999999999999999986421 1 12368999999999999875
No 203
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=97.63 E-value=0.00021 Score=61.67 Aligned_cols=61 Identities=21% Similarity=0.328 Sum_probs=50.7
Q ss_pred ccCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH--------H-----HHhcCCCcceeeeEEEEECC
Q psy4395 222 QMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE--------I-----INERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 222 ~~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~--------~-----~~~~~~h~~iv~l~~~~~~~ 282 (283)
...+|.+.+.+|.|+||.|+++..+.+|+.||+|.+.... . ...+++|+||++++++++++
T Consensus 5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 78 (309)
T cd07845 5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGK 78 (309)
T ss_pred cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecC
Confidence 3568999999999999999999999999999999986321 1 22368999999999998754
No 204
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=97.63 E-value=4.3e-05 Score=67.10 Aligned_cols=58 Identities=21% Similarity=0.362 Sum_probs=48.1
Q ss_pred CceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH--------H-----HHhcCCCcceeeeEEEEEC
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE--------I-----INERMTHQGMILAFTCYRN 281 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~--------~-----~~~~~~h~~iv~l~~~~~~ 281 (283)
+.|.+.+.+|.|+||.|+++.+..++..||+|.+.+.. + ....++||||++++++|.+
T Consensus 15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 85 (343)
T cd07878 15 ERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTP 85 (343)
T ss_pred hhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcc
Confidence 46888899999999999999999999999999987421 1 1236899999999988764
No 205
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=97.63 E-value=0.00019 Score=60.35 Aligned_cols=59 Identities=22% Similarity=0.408 Sum_probs=48.9
Q ss_pred CceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH---------HHH-----hcCCCcceeeeEEEEECC
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE---------IIN-----ERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~---------~~~-----~~~~h~~iv~l~~~~~~~ 282 (283)
.+|.+.+.+|.|+||.||+++.+.+++.||+|.+.... +.. ..++||||++++++++++
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 74 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIED 74 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEEC
Confidence 57889999999999999999999999999999775311 111 368999999999998765
No 206
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=97.61 E-value=0.00011 Score=65.42 Aligned_cols=34 Identities=21% Similarity=0.263 Sum_probs=23.9
Q ss_pred CEEEEEeCcccHHHHHHHHcCChhHHhhhhcceEEecCCC
Q psy4395 141 PVVLVAHSMGSLMCLYFLQRQSSAWKSKFVRSLVSLAAPW 180 (283)
Q Consensus 141 ~v~lvgHSmGg~va~~~~~~~~~~~~~~~v~~~i~i~~p~ 180 (283)
+|.++|||+||..+...+..... ++..|.+.+-.
T Consensus 229 ~i~~~GHSFGGATa~~~l~~d~r------~~~~I~LD~W~ 262 (379)
T PF03403_consen 229 RIGLAGHSFGGATALQALRQDTR------FKAGILLDPWM 262 (379)
T ss_dssp EEEEEEETHHHHHHHHHHHH-TT--------EEEEES---
T ss_pred heeeeecCchHHHHHHHHhhccC------cceEEEeCCcc
Confidence 68999999999999988877633 78888887643
No 207
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=97.58 E-value=0.00018 Score=63.78 Aligned_cols=59 Identities=19% Similarity=0.314 Sum_probs=49.4
Q ss_pred cCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechH--------HH-----HHhcCCCcceeeeEEEEEC
Q psy4395 223 MSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKV--------EI-----INERMTHQGMILAFTCYRN 281 (283)
Q Consensus 223 ~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~--------~~-----~~~~~~h~~iv~l~~~~~~ 281 (283)
..+|.+.+.+|.|+||.|+.+.+..+++.||+|++.+. .. ....++||||++++++|..
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~ 94 (364)
T cd07875 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTP 94 (364)
T ss_pred hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecc
Confidence 46899999999999999999999999999999998642 11 2236899999999998764
No 208
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=97.58 E-value=0.00019 Score=60.43 Aligned_cols=60 Identities=25% Similarity=0.434 Sum_probs=49.9
Q ss_pred cCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH------H-----HHhcCCCcceeeeEEEEECC
Q psy4395 223 MSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE------I-----INERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 223 ~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~------~-----~~~~~~h~~iv~l~~~~~~~ 282 (283)
..+|.+.+.+|.|+||.||++..+.+++.||+|++.... + ...+++||||++++++++++
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~ 78 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSR 78 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeC
Confidence 457999999999999999999999999999999986421 1 12367999999999998764
No 209
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.57 E-value=0.00012 Score=60.59 Aligned_cols=63 Identities=8% Similarity=0.149 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCChhHHhhhhcceEEecCCCCcch
Q psy4395 121 EYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSSAWKSKFVRSLVSLAAPWGGSV 184 (283)
Q Consensus 121 ~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~~~~~~~~v~~~i~i~~p~~g~~ 184 (283)
....++...++.+.++++..++++.||||||.+|..++.......... .-.+++.++|-.|..
T Consensus 109 ~~~~~~~~~~~~~~~~~p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~-~i~~~tFg~P~vg~~ 171 (229)
T cd00519 109 SLYNQVLPELKSALKQYPDYKIIVTGHSLGGALASLLALDLRLRGPGS-DVTVYTFGQPRVGNA 171 (229)
T ss_pred HHHHHHHHHHHHHHhhCCCceEEEEccCHHHHHHHHHHHHHHhhCCCC-ceEEEEeCCCCCCCH
Confidence 344556666666776777789999999999999988766532110011 234677788877764
No 210
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=97.57 E-value=0.00015 Score=71.27 Aligned_cols=61 Identities=25% Similarity=0.478 Sum_probs=51.1
Q ss_pred cccCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH--------H-----HHhcCCCcceeeeEEEEEC
Q psy4395 221 WQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE--------I-----INERMTHQGMILAFTCYRN 281 (283)
Q Consensus 221 ~~~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~--------~-----~~~~~~h~~iv~l~~~~~~ 281 (283)
....+|.+.+.||.|+||.||+++++.++..+|+|++.... + ....++|||||+++++|.+
T Consensus 10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~d 83 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLN 83 (1021)
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEe
Confidence 34578999999999999999999999999999999986421 1 2237899999999998854
No 211
>KOG0198|consensus
Probab=97.56 E-value=8.2e-05 Score=64.04 Aligned_cols=56 Identities=30% Similarity=0.548 Sum_probs=47.0
Q ss_pred cCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH------HHH-----hcCCCcceeeeEEE
Q psy4395 223 MSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE------IIN-----ERMTHQGMILAFTC 278 (283)
Q Consensus 223 ~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~------~~~-----~~~~h~~iv~l~~~ 278 (283)
..++...+.+|+|+||.|+++..+.+|..+|+|.+.... +.+ .+++|||||++++.
T Consensus 16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~ 82 (313)
T KOG0198|consen 16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGS 82 (313)
T ss_pred cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCc
Confidence 346778889999999999999999999999999998752 222 36889999999985
No 212
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=97.56 E-value=0.00032 Score=60.49 Aligned_cols=58 Identities=24% Similarity=0.383 Sum_probs=49.3
Q ss_pred ceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHHH---------H-----HhcCCCcceeeeEEEEECC
Q psy4395 225 DFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI---------I-----NERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 225 ~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~---------~-----~~~~~h~~iv~l~~~~~~~ 282 (283)
+|.+.+.++.|+||.|+++.++.+++.||+|.+.+... . ...++||||++++++++++
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~ 73 (305)
T cd05609 2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETK 73 (305)
T ss_pred CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecC
Confidence 68888999999999999999999999999999876431 1 1257899999999998875
No 213
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=97.55 E-value=0.00016 Score=62.29 Aligned_cols=60 Identities=20% Similarity=0.350 Sum_probs=46.0
Q ss_pred cCceeeeeeecccCCeeEEEEEEcC----------------CCcEEEEEeechH-------HHH-----HhcCCCcceee
Q psy4395 223 MSDFEVGCPLGTGKFGHVYLAKEKT----------------TQIMIALKVLYKV-------EII-----NERMTHQGMIL 274 (283)
Q Consensus 223 ~~~~~~~~~lg~g~fg~v~~~~~~~----------------~~~~~A~K~i~~~-------~~~-----~~~~~h~~iv~ 274 (283)
..+|.+.+.+|+|+||.|+++.... ++..||+|++... .+. ..+++||||++
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 83 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIR 83 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence 3578889999999999999997532 3457999998642 122 23689999999
Q ss_pred eEEEEECC
Q psy4395 275 AFTCYRNP 282 (283)
Q Consensus 275 l~~~~~~~ 282 (283)
+++++.++
T Consensus 84 ~~~~~~~~ 91 (304)
T cd05096 84 LLGVCVDE 91 (304)
T ss_pred EEEEEecC
Confidence 99998765
No 214
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=97.54 E-value=0.00034 Score=58.81 Aligned_cols=59 Identities=27% Similarity=0.575 Sum_probs=48.7
Q ss_pred CceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechH-----------HH-----HHhcCCCcceeeeEEEEECC
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKV-----------EI-----INERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~-----------~~-----~~~~~~h~~iv~l~~~~~~~ 282 (283)
.+|.+.+.+|.|+||.||.+..+.++..||+|.+... .+ ...+++||||++++++++++
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 76 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDP 76 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccC
Confidence 4688899999999999999999999999999987521 11 22378999999999998764
No 215
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=97.54 E-value=0.00025 Score=62.39 Aligned_cols=58 Identities=22% Similarity=0.398 Sum_probs=48.4
Q ss_pred CceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH--------H-----HHhcCCCcceeeeEEEEEC
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE--------I-----INERMTHQGMILAFTCYRN 281 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~--------~-----~~~~~~h~~iv~l~~~~~~ 281 (283)
+.|.+.+.+|.|+||.|+++..+.+++.||+|.+.+.. + ...+++||||+++++++.+
T Consensus 17 ~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~ 87 (345)
T cd07877 17 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 87 (345)
T ss_pred CceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeee
Confidence 57889999999999999999999999999999986421 1 1236899999999998864
No 216
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=97.54 E-value=0.00025 Score=62.54 Aligned_cols=60 Identities=20% Similarity=0.323 Sum_probs=49.6
Q ss_pred cCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechH--------HH-----HHhcCCCcceeeeEEEEECC
Q psy4395 223 MSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKV--------EI-----INERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 223 ~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~--------~~-----~~~~~~h~~iv~l~~~~~~~ 282 (283)
...|...+.+|.|+||.|+++.+..+++.||+|.+.+. .+ ....++||||++++++|..+
T Consensus 15 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 87 (353)
T cd07850 15 LKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQ 87 (353)
T ss_pred hcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccC
Confidence 35788999999999999999999999999999998642 11 22368999999999988653
No 217
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=97.54 E-value=0.00034 Score=59.87 Aligned_cols=59 Identities=25% Similarity=0.387 Sum_probs=49.4
Q ss_pred CceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH--------HH-----HhcCCCcceeeeEEEEECC
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE--------II-----NERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~--------~~-----~~~~~h~~iv~l~~~~~~~ 282 (283)
++|.+...+|.|.+|.||++..+.+++.||+|.+.... +. ...++||||++++++++++
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 73 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSE 73 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecC
Confidence 57889999999999999999999999999999886421 11 2268999999999999865
No 218
>KOG2984|consensus
Probab=97.53 E-value=0.00012 Score=57.99 Aligned_cols=74 Identities=15% Similarity=0.144 Sum_probs=53.0
Q ss_pred c-ccCCCcCcCCCCCCCCCC--cchHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCChhHHhhhhcceEE
Q psy4395 99 Y-QRDLSMRGAPYDFRKAPN--ENQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSSAWKSKFVRSLVS 175 (283)
Q Consensus 99 ~-~~~~d~~g~g~~~r~~~~--~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~~~~~~~~v~~~i~ 175 (283)
+ +++.|-+|+|.| |.+.. ..+-+.+|.+..++.+... .-.|+.++|.|=||..|+..|.++++. |.++|.
T Consensus 72 ~TivawDPpGYG~S-rPP~Rkf~~~ff~~Da~~avdLM~aL-k~~~fsvlGWSdGgiTalivAak~~e~-----v~rmii 144 (277)
T KOG2984|consen 72 VTIVAWDPPGYGTS-RPPERKFEVQFFMKDAEYAVDLMEAL-KLEPFSVLGWSDGGITALIVAAKGKEK-----VNRMII 144 (277)
T ss_pred eEEEEECCCCCCCC-CCCcccchHHHHHHhHHHHHHHHHHh-CCCCeeEeeecCCCeEEEEeeccChhh-----hhhhee
Confidence 5 788999999976 32222 2444455555555544432 345999999999999999999999886 999988
Q ss_pred ecCC
Q psy4395 176 LAAP 179 (283)
Q Consensus 176 i~~p 179 (283)
.++.
T Consensus 145 wga~ 148 (277)
T KOG2984|consen 145 WGAA 148 (277)
T ss_pred eccc
Confidence 7653
No 219
>KOG4840|consensus
Probab=97.53 E-value=0.00037 Score=56.05 Aligned_cols=90 Identities=21% Similarity=0.264 Sum_probs=64.2
Q ss_pred chHHHHHHHHHhCCc-ccCCCcCcCCCCCCCCCCcchHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCCh
Q psy4395 85 SYFSYIAAALVGLGY-QRDLSMRGAPYDFRKAPNENQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSS 163 (283)
Q Consensus 85 ~~~~~l~~~L~~~g~-~~~~d~~g~g~~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~~ 163 (283)
.|-..++.+|.+.++ .+.+-++.+...|... +..+-.+|++.+++++.......+|+|+|||-|..-.++|+..--
T Consensus 53 ~y~~~L~~~lde~~wslVq~q~~Ssy~G~Gt~--slk~D~edl~~l~~Hi~~~~fSt~vVL~GhSTGcQdi~yYlTnt~- 129 (299)
T KOG4840|consen 53 LYTTMLNRYLDENSWSLVQPQLRSSYNGYGTF--SLKDDVEDLKCLLEHIQLCGFSTDVVLVGHSTGCQDIMYYLTNTT- 129 (299)
T ss_pred ccHHHHHHHHhhccceeeeeeccccccccccc--cccccHHHHHHHHHHhhccCcccceEEEecCccchHHHHHHHhcc-
Confidence 466789999999999 6777666655444432 344456899999998765433458999999999999999984321
Q ss_pred hHHhhhhcceEEecCC
Q psy4395 164 AWKSKFVRSLVSLAAP 179 (283)
Q Consensus 164 ~~~~~~v~~~i~i~~p 179 (283)
++++|.+.|+.++.
T Consensus 130 --~~r~iraaIlqApV 143 (299)
T KOG4840|consen 130 --KDRKIRAAILQAPV 143 (299)
T ss_pred --chHHHHHHHHhCcc
Confidence 23347777766553
No 220
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=97.53 E-value=0.00034 Score=57.71 Aligned_cols=86 Identities=14% Similarity=0.148 Sum_probs=58.7
Q ss_pred cchHHHHHHHHHhCCc-ccCCCcCcCCCCCCCCCCcchHHHHHHHHHHHHHHHHc----------CCCCEEEEEeCcccH
Q psy4395 84 GSYFSYIAAALVGLGY-QRDLSMRGAPYDFRKAPNENQEYFANFKALIEETYDLN----------GGTPVVLVAHSMGSL 152 (283)
Q Consensus 84 ~~~~~~l~~~L~~~g~-~~~~d~~g~g~~~r~~~~~~~~~~~~l~~~i~~~~~~~----------~~~~v~lvgHSmGg~ 152 (283)
..||..+.+.++..|| ++++++...- . .+..+-+++..++++.+.+.. +-.++.++|||.||-
T Consensus 59 ns~Ys~lL~HIASHGfIVVAPQl~~~~-----~-p~~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGk 132 (307)
T PF07224_consen 59 NSFYSQLLAHIASHGFIVVAPQLYTLF-----P-PDGQDEIKSAASVINWLPEGLQHVLPENVEANLSKLALSGHSRGGK 132 (307)
T ss_pred hHHHHHHHHHHhhcCeEEEechhhccc-----C-CCchHHHHHHHHHHHHHHhhhhhhCCCCcccccceEEEeecCCccH
Confidence 4679999999999999 8998875421 1 122333445555555554321 124899999999999
Q ss_pred HHHHHHHcCChhHHhhhhcceEEecC
Q psy4395 153 MCLYFLQRQSSAWKSKFVRSLVSLAA 178 (283)
Q Consensus 153 va~~~~~~~~~~~~~~~v~~~i~i~~ 178 (283)
.|..++..+.. +-.+.++|-+.+
T Consensus 133 tAFAlALg~a~---~lkfsaLIGiDP 155 (307)
T PF07224_consen 133 TAFALALGYAT---SLKFSALIGIDP 155 (307)
T ss_pred HHHHHHhcccc---cCchhheecccc
Confidence 99998887652 223788887754
No 221
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=97.52 E-value=0.00028 Score=62.08 Aligned_cols=59 Identities=22% Similarity=0.377 Sum_probs=49.1
Q ss_pred CceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechH--------HHH-----HhcCCCcceeeeEEEEECC
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKV--------EII-----NERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~--------~~~-----~~~~~h~~iv~l~~~~~~~ 282 (283)
..|.+.+.+|.|+||.|+.+....++..||+|.+.+. .+. ...++||||++++++|+++
T Consensus 15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 86 (343)
T cd07880 15 DRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPD 86 (343)
T ss_pred cceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCC
Confidence 5688999999999999999999999999999998542 111 2368999999999998754
No 222
>KOG0577|consensus
Probab=97.51 E-value=5.7e-05 Score=68.89 Aligned_cols=58 Identities=28% Similarity=0.486 Sum_probs=47.3
Q ss_pred eeeeeeecccCCeeEEEEEEcCCCcEEEEEeechH---------HH-----HHhcCCCcceeeeEEEEECCC
Q psy4395 226 FEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKV---------EI-----INERMTHQGMILAFTCYRNPH 283 (283)
Q Consensus 226 ~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~---------~~-----~~~~~~h~~iv~l~~~~~~~~ 283 (283)
|.-.+.||.|+||.||.|++..+...||||.++-. .| +.+++.|||+|.+.+||-.++
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~ 99 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREH 99 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccc
Confidence 34457899999999999999999999999998631 12 234799999999999997653
No 223
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=97.50 E-value=0.00022 Score=59.84 Aligned_cols=59 Identities=25% Similarity=0.465 Sum_probs=48.8
Q ss_pred CceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH-----------HH-----HhcCCCcceeeeEEEEECC
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE-----------II-----NERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~-----------~~-----~~~~~h~~iv~l~~~~~~~ 282 (283)
+.|.+.+.+|.|++|.||.+....++..+|+|.+.... +. ..+++||||++++++++++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 76 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDD 76 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccC
Confidence 35788899999999999999999999999999886321 11 2278999999999999875
No 224
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=97.50 E-value=0.00038 Score=59.83 Aligned_cols=59 Identities=19% Similarity=0.237 Sum_probs=49.6
Q ss_pred CceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH------H-----HHhcCCCcceeeeEEEEECC
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE------I-----INERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~------~-----~~~~~~h~~iv~l~~~~~~~ 282 (283)
..|.+.+.+|.|++|.||++..+.++..||+|.+.... + ....++||||++++++|.++
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~ 88 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVG 88 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecC
Confidence 57888999999999999999999999999999996421 1 12367999999999998765
No 225
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=97.49 E-value=0.00022 Score=60.51 Aligned_cols=58 Identities=22% Similarity=0.324 Sum_probs=47.1
Q ss_pred ceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH-------HHH-----hcCCCcceeeeEEEEECC
Q psy4395 225 DFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE-------IIN-----ERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 225 ~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~-------~~~-----~~~~h~~iv~l~~~~~~~ 282 (283)
-|...+.+|.|+||.||++....++..+|+|.+.... +.+ .+++||||++++++|.++
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 74 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKD 74 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeC
Confidence 3566788999999999999999899999999986421 111 268999999999998765
No 226
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=97.49 E-value=0.00039 Score=59.76 Aligned_cols=61 Identities=26% Similarity=0.459 Sum_probs=50.0
Q ss_pred ccCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH--------H-----HHhcCCCcceeeeEEEEECC
Q psy4395 222 QMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE--------I-----INERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 222 ~~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~--------~-----~~~~~~h~~iv~l~~~~~~~ 282 (283)
.+.+|.+.+.+|.|+||.|+++..+.++..||+|.+.... . ...+++||||+++++++.++
T Consensus 10 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 83 (310)
T cd07865 10 EVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTK 83 (310)
T ss_pred hhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecc
Confidence 3567999999999999999999999999999999885321 1 12378999999999987654
No 227
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=97.48 E-value=0.00022 Score=60.19 Aligned_cols=59 Identities=17% Similarity=0.271 Sum_probs=46.2
Q ss_pred CceeeeeeecccCCeeEEEEEEc---CCCcEEEEEeechHH-------HHH-----hcCCCcceeeeEEEEECC
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEK---TTQIMIALKVLYKVE-------IIN-----ERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~---~~~~~~A~K~i~~~~-------~~~-----~~~~h~~iv~l~~~~~~~ 282 (283)
.+|.+.+.+|+|+||.|+.+..+ ..+..+|+|.++... +.. ..++||||++++++++++
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 78 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRG 78 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecC
Confidence 47889999999999999999765 345689999987531 111 257899999999998765
No 228
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=97.48 E-value=0.00044 Score=60.42 Aligned_cols=60 Identities=23% Similarity=0.367 Sum_probs=49.4
Q ss_pred cCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechH--------HHH-----HhcCCCcceeeeEEEEECC
Q psy4395 223 MSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKV--------EII-----NERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 223 ~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~--------~~~-----~~~~~h~~iv~l~~~~~~~ 282 (283)
...|.+.+.+|.|.||.|+++..+.++..||+|.+.+. .+. ...++||||++++++|..+
T Consensus 9 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 81 (328)
T cd07856 9 TNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISP 81 (328)
T ss_pred ccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecC
Confidence 35788999999999999999999999999999987531 121 2268999999999998753
No 229
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=97.47 E-value=0.0002 Score=61.10 Aligned_cols=56 Identities=23% Similarity=0.437 Sum_probs=43.6
Q ss_pred ceeeeeeecccCCeeEEEEEEcC-CCcEEEEEeechHH--------HHH--------hcCCCcceeeeEEEEE
Q psy4395 225 DFEVGCPLGTGKFGHVYLAKEKT-TQIMIALKVLYKVE--------IIN--------ERMTHQGMILAFTCYR 280 (283)
Q Consensus 225 ~~~~~~~lg~g~fg~v~~~~~~~-~~~~~A~K~i~~~~--------~~~--------~~~~h~~iv~l~~~~~ 280 (283)
+|.+.+.+|.|+||.||++++.. ++..+|+|.+.... ..+ .++.||||+++++++.
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~ 74 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCT 74 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEe
Confidence 57788999999999999999865 56889999886321 111 1357999999999875
No 230
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=97.47 E-value=0.00019 Score=64.58 Aligned_cols=61 Identities=21% Similarity=0.423 Sum_probs=46.8
Q ss_pred ccCceeeeeeecccCCeeEEEEEEc-----CCCcEEEEEeechH-------HHHHh-----cCC-CcceeeeEEEEECC
Q psy4395 222 QMSDFEVGCPLGTGKFGHVYLAKEK-----TTQIMIALKVLYKV-------EIINE-----RMT-HQGMILAFTCYRNP 282 (283)
Q Consensus 222 ~~~~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~A~K~i~~~-------~~~~~-----~~~-h~~iv~l~~~~~~~ 282 (283)
..+++.+.+.+|.|+||.|+++... .++..||+|++... .+..+ .+. |||||+++++++++
T Consensus 35 ~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~ 113 (401)
T cd05107 35 PRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKG 113 (401)
T ss_pred cHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccC
Confidence 3457888899999999999999854 34568999999743 12222 465 99999999998875
No 231
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.47 E-value=0.00083 Score=58.02 Aligned_cols=65 Identities=18% Similarity=0.160 Sum_probs=44.5
Q ss_pred chHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHc---CChhHHhhhhcceEEecCCCCcch
Q psy4395 119 NQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQR---QSSAWKSKFVRSLVSLAAPWGGSV 184 (283)
Q Consensus 119 ~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~---~~~~~~~~~v~~~i~i~~p~~g~~ 184 (283)
......+|+.+|..+.++.+..+|+|++||||+-+++..+.+ .+..-....|..+| +++|=.+..
T Consensus 170 ~~~Sr~aLe~~lr~La~~~~~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nVi-LAaPDiD~D 237 (377)
T COG4782 170 TNYSRPALERLLRYLATDKPVKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVI-LAAPDIDVD 237 (377)
T ss_pred hhhhHHHHHHHHHHHHhCCCCceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheE-eeCCCCChh
Confidence 445567789999998887777899999999999999888765 11110122267666 455544443
No 232
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=97.45 E-value=0.00012 Score=65.20 Aligned_cols=61 Identities=21% Similarity=0.370 Sum_probs=46.6
Q ss_pred ccCceeeeeeecccCCeeEEEEEE-----cCCCcEEEEEeechHH-------HHHh-----cC-CCcceeeeEEEEECC
Q psy4395 222 QMSDFEVGCPLGTGKFGHVYLAKE-----KTTQIMIALKVLYKVE-------IINE-----RM-THQGMILAFTCYRNP 282 (283)
Q Consensus 222 ~~~~~~~~~~lg~g~fg~v~~~~~-----~~~~~~~A~K~i~~~~-------~~~~-----~~-~h~~iv~l~~~~~~~ 282 (283)
...+|.+.+.+|.|+||.|+++.. ..++..||+|++.... +.++ .+ +|||||++++++++.
T Consensus 33 ~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~ 111 (375)
T cd05104 33 PRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVG 111 (375)
T ss_pred chHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccC
Confidence 345789999999999999999974 3456789999986321 2222 45 899999999998765
No 233
>KOG0667|consensus
Probab=97.44 E-value=0.00027 Score=64.94 Aligned_cols=57 Identities=21% Similarity=0.345 Sum_probs=46.4
Q ss_pred ceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHHH-HH---------------hcCCCcceeeeEEEEEC
Q psy4395 225 DFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI-IN---------------ERMTHQGMILAFTCYRN 281 (283)
Q Consensus 225 ~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~-~~---------------~~~~h~~iv~l~~~~~~ 281 (283)
.|.+...||+|+||.|..|.+..|++.||||+|+.+.- .+ +..+--|+|+++++|.-
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~f 259 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYF 259 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccc
Confidence 57888999999999999999999999999999986531 11 13345589999999864
No 234
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=97.44 E-value=0.00091 Score=57.45 Aligned_cols=70 Identities=14% Similarity=0.170 Sum_probs=51.7
Q ss_pred HHHHHhCCc-ccCCCcCcCCCCCCCCCCcchHHHHHHHHHHHHHHHHc---CCCCEEEEEeCcccHHHHHHHHcCC
Q psy4395 91 AAALVGLGY-QRDLSMRGAPYDFRKAPNENQEYFANFKALIEETYDLN---GGTPVVLVAHSMGSLMCLYFLQRQS 162 (283)
Q Consensus 91 ~~~L~~~g~-~~~~d~~g~g~~~r~~~~~~~~~~~~l~~~i~~~~~~~---~~~~v~lvgHSmGg~va~~~~~~~~ 162 (283)
.+.....+- ++.+++||.|+|.... +..+...+..+.++.++++. ..+.+++.|||+||.|+..++....
T Consensus 164 ~~~ak~~~aNvl~fNYpGVg~S~G~~--s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~~ 237 (365)
T PF05677_consen 164 QRFAKELGANVLVFNYPGVGSSTGPP--SRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKEV 237 (365)
T ss_pred HHHHHHcCCcEEEECCCccccCCCCC--CHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhcc
Confidence 333444666 8889999999884333 35777888888888887543 2257999999999999998877753
No 235
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=97.44 E-value=0.00028 Score=60.49 Aligned_cols=60 Identities=23% Similarity=0.427 Sum_probs=49.7
Q ss_pred cCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH--------H-----HHhcCCCcceeeeEEEEECC
Q psy4395 223 MSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE--------I-----INERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 223 ~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~--------~-----~~~~~~h~~iv~l~~~~~~~ 282 (283)
.++|.+.+.+|.|+||.|+++..+.+++.||+|.++... + ....++||||+++++++.++
T Consensus 6 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~ 78 (302)
T cd07864 6 VDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDK 78 (302)
T ss_pred hhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCc
Confidence 467888999999999999999999999999999996421 1 12367899999999988764
No 236
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=97.43 E-value=0.0002 Score=60.23 Aligned_cols=60 Identities=28% Similarity=0.474 Sum_probs=49.7
Q ss_pred cCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH-----------HHHhcCCCcceeeeEEEEECC
Q psy4395 223 MSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE-----------IINERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 223 ~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~-----------~~~~~~~h~~iv~l~~~~~~~ 282 (283)
..+|.+.+.+|.|+||.|+.+....+++.||+|.+.... .....++||||++++++++++
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~ 78 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRR 78 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeC
Confidence 457888899999999999999999999999999986421 122368999999999998764
No 237
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=97.42 E-value=0.00016 Score=61.58 Aligned_cols=60 Identities=17% Similarity=0.213 Sum_probs=47.5
Q ss_pred cCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH-------HHH-----hcC-CCcceeeeEEEEECC
Q psy4395 223 MSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE-------IIN-----ERM-THQGMILAFTCYRNP 282 (283)
Q Consensus 223 ~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~-------~~~-----~~~-~h~~iv~l~~~~~~~ 282 (283)
.+++.....+|.|+||.|+.+..+.+++.+|+|.+.+.. +.. .++ .||||+++++++.++
T Consensus 3 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~ 75 (288)
T cd06616 3 AEDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFRE 75 (288)
T ss_pred HHHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecC
Confidence 346667788999999999999999999999999987531 111 145 499999999988765
No 238
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=97.42 E-value=0.00047 Score=58.90 Aligned_cols=60 Identities=22% Similarity=0.458 Sum_probs=49.1
Q ss_pred cCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH-----H-----HHhcC-CCcceeeeEEEEECC
Q psy4395 223 MSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE-----I-----INERM-THQGMILAFTCYRNP 282 (283)
Q Consensus 223 ~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~-----~-----~~~~~-~h~~iv~l~~~~~~~ 282 (283)
..+|.+...++.|+||.||++..+.+++.+|+|++.... + ...++ +||||+++++++.++
T Consensus 21 ~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~ 91 (291)
T cd06639 21 TDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKA 91 (291)
T ss_pred CCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEec
Confidence 467999999999999999999999999999999996421 1 11245 799999999988753
No 239
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=97.41 E-value=0.00011 Score=64.61 Aligned_cols=60 Identities=23% Similarity=0.399 Sum_probs=45.8
Q ss_pred ccCceeeeeeecccCCeeEEEEEE-----cCCCcEEEEEeechHH-------HHH-----hcC-CCcceeeeEEEEEC
Q psy4395 222 QMSDFEVGCPLGTGKFGHVYLAKE-----KTTQIMIALKVLYKVE-------IIN-----ERM-THQGMILAFTCYRN 281 (283)
Q Consensus 222 ~~~~~~~~~~lg~g~fg~v~~~~~-----~~~~~~~A~K~i~~~~-------~~~-----~~~-~h~~iv~l~~~~~~ 281 (283)
..++|.+.+.+|.|+||.||++.. ..+++.||+|.+.... +.+ ..+ +|||||++++++..
T Consensus 5 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~ 82 (343)
T cd05103 5 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK 82 (343)
T ss_pred chhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeec
Confidence 345799999999999999999984 3467899999986421 111 245 78999999987754
No 240
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=97.41 E-value=0.00045 Score=58.76 Aligned_cols=61 Identities=18% Similarity=0.303 Sum_probs=47.8
Q ss_pred ccCceeeeeeecccCCeeEEEEEEc----CCCcEEEEEeechH-------HHH-----HhcCCCcceeeeEEEEECC
Q psy4395 222 QMSDFEVGCPLGTGKFGHVYLAKEK----TTQIMIALKVLYKV-------EII-----NERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 222 ~~~~~~~~~~lg~g~fg~v~~~~~~----~~~~~~A~K~i~~~-------~~~-----~~~~~h~~iv~l~~~~~~~ 282 (283)
.+.++.+.+.+|+|+||.||++... .++..+|+|.+... .+. ...++||||+++++++.++
T Consensus 3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 79 (283)
T cd05090 3 PLSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQE 79 (283)
T ss_pred ChhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecC
Confidence 4568899999999999999999854 34578999999631 122 2378999999999998765
No 241
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=97.40 E-value=0.00026 Score=59.27 Aligned_cols=59 Identities=25% Similarity=0.414 Sum_probs=46.5
Q ss_pred cCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH-----HH-----HhcCCCcceeeeEEEEECC
Q psy4395 223 MSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE-----II-----NERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 223 ~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~-----~~-----~~~~~h~~iv~l~~~~~~~ 282 (283)
.++|.+.+.+|.|+||.||++..+ .+..+|+|.+.+.. +. ...++||||++++++++++
T Consensus 3 ~~~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 71 (256)
T cd05114 3 PSELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQ 71 (256)
T ss_pred HHHcEEeeEecCCcCceEEEEEec-cCceEEEEecccCCccHHHHHHHHHHHHHCCCCCceeEEEEEccC
Confidence 357888999999999999999775 45679999876432 22 2368999999999998765
No 242
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=97.39 E-value=0.00028 Score=61.21 Aligned_cols=61 Identities=21% Similarity=0.250 Sum_probs=47.6
Q ss_pred ccCceeeeeeecccCCeeEEEEEEcCCCc----EEEEEeechH-------HH-----HHhcCCCcceeeeEEEEECC
Q psy4395 222 QMSDFEVGCPLGTGKFGHVYLAKEKTTQI----MIALKVLYKV-------EI-----INERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 222 ~~~~~~~~~~lg~g~fg~v~~~~~~~~~~----~~A~K~i~~~-------~~-----~~~~~~h~~iv~l~~~~~~~ 282 (283)
...+|...+.+|+|+||.||++....++. .||+|.+... .+ ....++||||+++++++.++
T Consensus 5 ~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~ 81 (316)
T cd05108 5 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS 81 (316)
T ss_pred chhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC
Confidence 45689999999999999999999876665 3899998532 11 22368999999999987653
No 243
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=97.39 E-value=0.00032 Score=59.60 Aligned_cols=58 Identities=19% Similarity=0.464 Sum_probs=48.1
Q ss_pred ceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH--------H-----HHhcCCCcceeeeEEEEECC
Q psy4395 225 DFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE--------I-----INERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 225 ~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~--------~-----~~~~~~h~~iv~l~~~~~~~ 282 (283)
.|.+.+.++.|++|.|+++..+.+++.||+|.+.... + ....++||||++++++|+++
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~ 72 (286)
T cd07847 2 KYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRK 72 (286)
T ss_pred ceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeC
Confidence 5788899999999999999999999999999875321 1 12368899999999998865
No 244
>KOG0033|consensus
Probab=97.39 E-value=2.4e-06 Score=69.66 Aligned_cols=60 Identities=20% Similarity=0.347 Sum_probs=50.6
Q ss_pred cCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHHH--------HH-----hcCCCcceeeeEEEEECC
Q psy4395 223 MSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI--------IN-----ERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 223 ~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~--------~~-----~~~~h~~iv~l~~~~~~~ 282 (283)
.+.|.+...+|+|.|+.|+.+.+..||+.+|+|+|+-.++ .+ +.++|||||+|++.++.+
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~ 82 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEE 82 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhccc
Confidence 4578888899999999999999999999999999986543 22 379999999999877654
No 245
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=97.39 E-value=0.00089 Score=53.83 Aligned_cols=87 Identities=25% Similarity=0.273 Sum_probs=54.1
Q ss_pred hHHHHHHHHHhCCcccCCCcCcCCCCCCCCCCcchHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCChhH
Q psy4395 86 YFSYIAAALVGLGYQRDLSMRGAPYDFRKAPNENQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSSAW 165 (283)
Q Consensus 86 ~~~~l~~~L~~~g~~~~~d~~g~g~~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~~~~ 165 (283)
.|..++..|...--+++++++|++.+-.. ....+...+. .++.+....+..+++++||||||.++..++......
T Consensus 14 ~~~~~~~~l~~~~~v~~~~~~g~~~~~~~-~~~~~~~~~~---~~~~l~~~~~~~~~~l~g~s~Gg~~a~~~a~~l~~~- 88 (212)
T smart00824 14 EYARLAAALRGRRDVSALPLPGFGPGEPL-PASADALVEA---QAEAVLRAAGGRPFVLVGHSSGGLLAHAVAARLEAR- 88 (212)
T ss_pred HHHHHHHhcCCCccEEEecCCCCCCCCCC-CCCHHHHHHH---HHHHHHHhcCCCCeEEEEECHHHHHHHHHHHHHHhC-
Confidence 46788888876322888899998754221 1233333333 333333444556999999999999998877753221
Q ss_pred HhhhhcceEEecC
Q psy4395 166 KSKFVRSLVSLAA 178 (283)
Q Consensus 166 ~~~~v~~~i~i~~ 178 (283)
...+.+++++.+
T Consensus 89 -~~~~~~l~~~~~ 100 (212)
T smart00824 89 -GIPPAAVVLLDT 100 (212)
T ss_pred -CCCCcEEEEEcc
Confidence 112778887754
No 246
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=97.38 E-value=0.0007 Score=56.80 Aligned_cols=59 Identities=20% Similarity=0.377 Sum_probs=48.9
Q ss_pred CceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechH---------HHHH-----hcCCCcceeeeEEEEECC
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKV---------EIIN-----ERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~---------~~~~-----~~~~h~~iv~l~~~~~~~ 282 (283)
.+|.+.+.+|.|++|.|+.+..+.+++.||+|.+... .+.+ .+++|++|++++++|.++
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~ 74 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIEN 74 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecC
Confidence 4688899999999999999999999999999988531 1222 367999999999998765
No 247
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=97.38 E-value=0.00064 Score=57.16 Aligned_cols=59 Identities=27% Similarity=0.522 Sum_probs=48.3
Q ss_pred CceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechH-----------HHH-----HhcCCCcceeeeEEEEECC
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKV-----------EII-----NERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~-----------~~~-----~~~~~h~~iv~l~~~~~~~ 282 (283)
.+|.+.+.+|.|+||.|+++..+.++..||+|.+... .+. ...++||||+++++++.++
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~ 76 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDP 76 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcC
Confidence 4688899999999999999999999999999987421 111 2368999999999998764
No 248
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=97.38 E-value=0.00032 Score=64.95 Aligned_cols=59 Identities=19% Similarity=0.156 Sum_probs=48.4
Q ss_pred ccCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH--------HH-----HhcCCCcceeeeEEEEE
Q psy4395 222 QMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE--------II-----NERMTHQGMILAFTCYR 280 (283)
Q Consensus 222 ~~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~--------~~-----~~~~~h~~iv~l~~~~~ 280 (283)
....|.+.+.+|.|+||.||+++.+.+++.||+|++.... .. ...++|+||+++++.|.
T Consensus 30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~ 101 (496)
T PTZ00283 30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFA 101 (496)
T ss_pred cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeeccee
Confidence 3468999999999999999999999999999999986431 11 12678999999887764
No 249
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=97.38 E-value=0.0005 Score=58.66 Aligned_cols=58 Identities=19% Similarity=0.255 Sum_probs=48.0
Q ss_pred ceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechH-------HHHH-----hcCCCcceeeeEEEEECC
Q psy4395 225 DFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKV-------EIIN-----ERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 225 ~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~-------~~~~-----~~~~h~~iv~l~~~~~~~ 282 (283)
+|...+.+|.|++|.|+++....+++.+|+|.+.+. .+.+ ..++||||++++++|.++
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 71 (287)
T cd06621 2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDE 71 (287)
T ss_pred ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEcc
Confidence 578889999999999999999999999999998742 1222 268999999999988643
No 250
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=97.37 E-value=0.00045 Score=62.19 Aligned_cols=61 Identities=20% Similarity=0.349 Sum_probs=46.3
Q ss_pred ccCceeeeeeecccCCeeEEEEEEcCC-----CcEEEEEeechH-------HHHHh-----cCC-CcceeeeEEEEECC
Q psy4395 222 QMSDFEVGCPLGTGKFGHVYLAKEKTT-----QIMIALKVLYKV-------EIINE-----RMT-HQGMILAFTCYRNP 282 (283)
Q Consensus 222 ~~~~~~~~~~lg~g~fg~v~~~~~~~~-----~~~~A~K~i~~~-------~~~~~-----~~~-h~~iv~l~~~~~~~ 282 (283)
....|.+.+.||.|+||.||.+..... +..||+|++... .+.++ .+. |||||++++++++.
T Consensus 35 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~ 113 (400)
T cd05105 35 PRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKS 113 (400)
T ss_pred cccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccC
Confidence 456888999999999999999986533 346999999642 12222 464 99999999998764
No 251
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=97.37 E-value=0.00015 Score=61.74 Aligned_cols=58 Identities=22% Similarity=0.348 Sum_probs=47.9
Q ss_pred ceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechH-------HHHH-----hcCCCcceeeeEEEEECC
Q psy4395 225 DFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKV-------EIIN-----ERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 225 ~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~-------~~~~-----~~~~h~~iv~l~~~~~~~ 282 (283)
+|.+.+.+|.|+||.|+++....++..||+|.+... .+.+ ..++||||++++++++++
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~ 71 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIE 71 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecC
Confidence 677889999999999999999999999999988632 1222 268999999999988764
No 252
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=97.37 E-value=0.00017 Score=60.64 Aligned_cols=59 Identities=22% Similarity=0.416 Sum_probs=48.1
Q ss_pred CceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH---------HH-----HhcCCCcceeeeEEEEECC
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE---------II-----NERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~---------~~-----~~~~~h~~iv~l~~~~~~~ 282 (283)
.+|.+.+.+|.|++|.|+++..+.++..+|+|.+.+.. +. ...++||||++++++|.++
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~ 74 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIED 74 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeC
Confidence 46778889999999999999999999999999876421 11 1268899999999988764
No 253
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=97.36 E-value=0.00035 Score=62.25 Aligned_cols=62 Identities=21% Similarity=0.407 Sum_probs=47.7
Q ss_pred cccCceeeeeeecccCCeeEEEEEEcCCC-----cEEEEEeechH-------HHHHh-----cC-CCcceeeeEEEEECC
Q psy4395 221 WQMSDFEVGCPLGTGKFGHVYLAKEKTTQ-----IMIALKVLYKV-------EIINE-----RM-THQGMILAFTCYRNP 282 (283)
Q Consensus 221 ~~~~~~~~~~~lg~g~fg~v~~~~~~~~~-----~~~A~K~i~~~-------~~~~~-----~~-~h~~iv~l~~~~~~~ 282 (283)
+..++|.+.+.+|.|+||.|+.+....++ ..||+|.+... .+.++ .+ +|||||++++++.++
T Consensus 35 ~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~ 114 (374)
T cd05106 35 FPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHG 114 (374)
T ss_pred ccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCC
Confidence 34568999999999999999999865443 57999998642 12222 45 899999999998765
No 254
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=97.35 E-value=0.00025 Score=61.36 Aligned_cols=53 Identities=30% Similarity=0.516 Sum_probs=42.1
Q ss_pred eeeecccCCeeEEEEEEcC--CCcEEEEEeechHH----H-----HHhcCCCcceeeeEEEEEC
Q psy4395 229 GCPLGTGKFGHVYLAKEKT--TQIMIALKVLYKVE----I-----INERMTHQGMILAFTCYRN 281 (283)
Q Consensus 229 ~~~lg~g~fg~v~~~~~~~--~~~~~A~K~i~~~~----~-----~~~~~~h~~iv~l~~~~~~ 281 (283)
.+.+|.|+||.||+++.+. ++..||+|.+.... . ....++||||++++++|.+
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 69 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLS 69 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCCcHHHHHHHHHHHhcCCCCCcceeeeEec
Confidence 4679999999999999764 67899999987431 1 2237899999999998864
No 255
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=97.35 E-value=0.0003 Score=59.66 Aligned_cols=58 Identities=22% Similarity=0.318 Sum_probs=47.7
Q ss_pred ceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH-------HHH-----hcCCCcceeeeEEEEECC
Q psy4395 225 DFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE-------IIN-----ERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 225 ~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~-------~~~-----~~~~h~~iv~l~~~~~~~ 282 (283)
.|...+.+|.|+||.||.+..+.++..+|+|++.+.. +.+ ..++||||++++++++++
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 74 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKG 74 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC
Confidence 4666788999999999999999999999999987432 111 267999999999998865
No 256
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=97.33 E-value=0.00063 Score=56.91 Aligned_cols=59 Identities=27% Similarity=0.478 Sum_probs=49.4
Q ss_pred CceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH------HH-----HhcCCCcceeeeEEEEECC
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE------II-----NERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~------~~-----~~~~~h~~iv~l~~~~~~~ 282 (283)
++|.+.+.++.|+||.|+++..+.++..+++|++.... +. ...++||||+++++++.+.
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~ 72 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRR 72 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeC
Confidence 57889999999999999999999999999999987431 22 2378999999999988764
No 257
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=97.33 E-value=0.00045 Score=59.75 Aligned_cols=58 Identities=31% Similarity=0.460 Sum_probs=48.8
Q ss_pred ceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHHHH---------H-----hcCCCcceeeeEEEEECC
Q psy4395 225 DFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEII---------N-----ERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 225 ~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~~---------~-----~~~~h~~iv~l~~~~~~~ 282 (283)
+|.+.+.+|.|++|.||++....+++.||+|.+.+.... . ..++||||+++++++++.
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 73 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTE 73 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecC
Confidence 678889999999999999999999999999999754211 1 267899999999988764
No 258
>PLN00413 triacylglycerol lipase
Probab=97.32 E-value=0.00055 Score=61.49 Aligned_cols=62 Identities=16% Similarity=0.284 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHc---CChhHHhhhhcceEEecCCCCcchh
Q psy4395 124 ANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQR---QSSAWKSKFVRSLVSLAAPWGGSVK 185 (283)
Q Consensus 124 ~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~---~~~~~~~~~v~~~i~i~~p~~g~~~ 185 (283)
..+...++.+.++++..++++.||||||.+|..++.. +.+......+.++++.++|-.|...
T Consensus 268 y~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~~L~~~~~~~~~~ri~~VYTFG~PRVGN~~ 332 (479)
T PLN00413 268 YTILRHLKEIFDQNPTSKFILSGHSLGGALAILFTAVLIMHDEEEMLERLEGVYTFGQPRVGDED 332 (479)
T ss_pred HHHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHHHHHhccchhhccccceEEEeCCCCCccHH
Confidence 3566667777777888899999999999999887642 1111111235678899999888653
No 259
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=97.32 E-value=0.00019 Score=61.08 Aligned_cols=60 Identities=23% Similarity=0.258 Sum_probs=49.5
Q ss_pred cCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechH-------HHHH-----hcCCCcceeeeEEEEECC
Q psy4395 223 MSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKV-------EIIN-----ERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 223 ~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~-------~~~~-----~~~~h~~iv~l~~~~~~~ 282 (283)
.++|.+.+.+|+|+||.|+++....+++.||+|++... .+.+ ..++||||++++++++++
T Consensus 4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 75 (284)
T cd06620 4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNE 75 (284)
T ss_pred HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecC
Confidence 45788889999999999999999999999999987642 1111 268999999999998865
No 260
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=97.32 E-value=0.0005 Score=60.17 Aligned_cols=58 Identities=24% Similarity=0.370 Sum_probs=47.6
Q ss_pred CceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechH---H----H-----HHhcCCCcceeeeEEEEEC
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKV---E----I-----INERMTHQGMILAFTCYRN 281 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~---~----~-----~~~~~~h~~iv~l~~~~~~ 281 (283)
++|.+.+.+|.|++|.||.+.++.+|+.||+|.+... . . ....++||||+++++++..
T Consensus 5 ~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 74 (336)
T cd07849 5 PRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRP 74 (336)
T ss_pred cceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeec
Confidence 5789999999999999999999999999999998631 1 1 1236789999999987654
No 261
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=97.32 E-value=0.00018 Score=60.79 Aligned_cols=58 Identities=36% Similarity=0.587 Sum_probs=48.1
Q ss_pred ceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHHH---------H-----HhcCC-CcceeeeEEEEECC
Q psy4395 225 DFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI---------I-----NERMT-HQGMILAFTCYRNP 282 (283)
Q Consensus 225 ~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~---------~-----~~~~~-h~~iv~l~~~~~~~ 282 (283)
+|.+.+.+|.|++|.||.+..+.+++.||+|++.+..+ . ...++ ||||++++++|+++
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~ 74 (280)
T cd05581 2 DFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDE 74 (280)
T ss_pred CceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCC
Confidence 68888999999999999999999999999999976321 1 12566 99999999887654
No 262
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=97.32 E-value=0.00075 Score=56.82 Aligned_cols=57 Identities=26% Similarity=0.503 Sum_probs=47.3
Q ss_pred ceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechH-----------HH-----HHhcCCCcceeeeEEEEEC
Q psy4395 225 DFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKV-----------EI-----INERMTHQGMILAFTCYRN 281 (283)
Q Consensus 225 ~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~-----------~~-----~~~~~~h~~iv~l~~~~~~ 281 (283)
+|...+.+|.|+||.||++....++..||+|.+... .+ ....++||||+++++++++
T Consensus 3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 75 (266)
T cd06651 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRD 75 (266)
T ss_pred CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEc
Confidence 577888999999999999999999999999988532 11 2236899999999999875
No 263
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=97.30 E-value=0.00043 Score=59.17 Aligned_cols=59 Identities=27% Similarity=0.353 Sum_probs=49.2
Q ss_pred CceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH------HH-----HhcCCCcceeeeEEEEECC
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE------II-----NERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~------~~-----~~~~~h~~iv~l~~~~~~~ 282 (283)
+.|.+.+.+|.|+||.||+++...++..+++|.+.... +. ...++||||++++++++.+
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 81 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWD 81 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeC
Confidence 46888999999999999999999999999999986431 11 2368999999999998764
No 264
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=97.30 E-value=0.00078 Score=58.08 Aligned_cols=59 Identities=29% Similarity=0.459 Sum_probs=48.2
Q ss_pred CceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechH---------HHH-----HhcCCCcceeeeEEEEECC
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKV---------EII-----NERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~---------~~~-----~~~~~h~~iv~l~~~~~~~ 282 (283)
..|...+.+|.|+||.||++..+.+++.||+|.+... .+. ...++||||+++++++.++
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~ 87 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLRE 87 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeC
Confidence 3477788999999999999999999999999988631 121 2368999999999998865
No 265
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=97.30 E-value=0.00029 Score=59.77 Aligned_cols=59 Identities=27% Similarity=0.417 Sum_probs=49.1
Q ss_pred CceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH------H-----HHhcCCCcceeeeEEEEECC
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE------I-----INERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~------~-----~~~~~~h~~iv~l~~~~~~~ 282 (283)
+.|.+.+.+|.|++|.|+.+....++..+|+|.+.... + ...+++||||+++++.++++
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 74 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYE 74 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecC
Confidence 56888899999999999999999999999999986321 1 12368899999999998865
No 266
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=97.30 E-value=0.00059 Score=59.96 Aligned_cols=59 Identities=22% Similarity=0.356 Sum_probs=48.5
Q ss_pred CceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechH--------HH-----HHhcCCCcceeeeEEEEECC
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKV--------EI-----INERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~--------~~-----~~~~~~h~~iv~l~~~~~~~ 282 (283)
..|.....+|.|+||.|+++..+.+++.||+|.+.+. .+ ....++||||++++++|...
T Consensus 15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 86 (342)
T cd07879 15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSA 86 (342)
T ss_pred cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheeccc
Confidence 4688889999999999999999999999999998642 11 12268899999999988653
No 267
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=97.29 E-value=0.0013 Score=56.52 Aligned_cols=59 Identities=17% Similarity=0.241 Sum_probs=49.3
Q ss_pred CceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH------H-----HHhcCCCcceeeeEEEEECC
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE------I-----INERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~------~-----~~~~~~h~~iv~l~~~~~~~ 282 (283)
..|.+.+.+|.|++|.||++..+.+++.+|+|.+.... + ....+.||||+++++.|.++
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~ 89 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVG 89 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeC
Confidence 57888999999999999999999999999999987532 1 12357899999999988764
No 268
>KOG4250|consensus
Probab=97.29 E-value=4.1e-05 Score=70.89 Aligned_cols=57 Identities=28% Similarity=0.483 Sum_probs=46.6
Q ss_pred ceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHHH------------HHhcCCCcceeeeEEEEEC
Q psy4395 225 DFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI------------INERMTHQGMILAFTCYRN 281 (283)
Q Consensus 225 ~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~------------~~~~~~h~~iv~l~~~~~~ 281 (283)
.+.....+|+|+||.|+..+++.+|..+|+|.+++... ..+++.|||||+++++=++
T Consensus 14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~ 82 (732)
T KOG4250|consen 14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEET 82 (732)
T ss_pred ceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCc
Confidence 45556689999999999999999999999999987321 2237889999999887554
No 269
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=97.29 E-value=0.00056 Score=57.34 Aligned_cols=60 Identities=17% Similarity=0.344 Sum_probs=47.4
Q ss_pred ccCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH-----H-----HHhcCCCcceeeeEEEEECC
Q psy4395 222 QMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE-----I-----INERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 222 ~~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~-----~-----~~~~~~h~~iv~l~~~~~~~ 282 (283)
..++|.+.+.+|.|++|.||++... .+..||+|.+.... + ....++||||+++++++++.
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 73 (261)
T cd05072 4 PRESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKE 73 (261)
T ss_pred chHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCchhHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence 3568999999999999999999864 56679999886422 1 12378999999999988764
No 270
>KOG0201|consensus
Probab=97.28 E-value=0.00013 Score=64.10 Aligned_cols=58 Identities=21% Similarity=0.317 Sum_probs=47.7
Q ss_pred CceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHHHHH------------hcCCCcceeeeEEEEEC
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIIN------------ERMTHQGMILAFTCYRN 281 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~~~------------~~~~h~~iv~l~~~~~~ 281 (283)
..|.....+|+|+||.||++.+..+++.||+|++..+.... -.++++||.++|++|-.
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~ 82 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLK 82 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheee
Confidence 34666688999999999999999999999999998764322 15789999999998753
No 271
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=97.28 E-value=0.0005 Score=57.76 Aligned_cols=60 Identities=20% Similarity=0.369 Sum_probs=49.7
Q ss_pred cCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH-----HH-----HhcCCCcceeeeEEEEECC
Q psy4395 223 MSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE-----II-----NERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 223 ~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~-----~~-----~~~~~h~~iv~l~~~~~~~ 282 (283)
..++.+.+.+|.|++|.|+++..+.++..+|+|.+.+.. +. ...++||||+++++++..+
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 74 (263)
T cd05052 5 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE 74 (263)
T ss_pred hHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCCCChhheEEEEcCC
Confidence 357888999999999999999999999999999987542 11 2368999999999987654
No 272
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=97.28 E-value=0.00057 Score=58.10 Aligned_cols=58 Identities=21% Similarity=0.383 Sum_probs=47.4
Q ss_pred cCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH-----HH-----HhcC-CCcceeeeEEEEE
Q psy4395 223 MSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE-----II-----NERM-THQGMILAFTCYR 280 (283)
Q Consensus 223 ~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~-----~~-----~~~~-~h~~iv~l~~~~~ 280 (283)
..+|.+.+.+|.|+||.|+++..+.++..+|+|++.... +. ..++ +||||+++++++.
T Consensus 17 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 85 (286)
T cd06638 17 SDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYY 85 (286)
T ss_pred ccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeee
Confidence 468899999999999999999999999999999986421 11 1245 7999999999873
No 273
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=97.28 E-value=0.00086 Score=65.08 Aligned_cols=86 Identities=12% Similarity=0.035 Sum_probs=62.7
Q ss_pred HHHHHHHhCCc-ccCCCcCcCCCCCCCCCCcchHHHHHHHHHHHHHHHHc----------------CCCCEEEEEeCccc
Q psy4395 89 YIAAALVGLGY-QRDLSMRGAPYDFRKAPNENQEYFANFKALIEETYDLN----------------GGTPVVLVAHSMGS 151 (283)
Q Consensus 89 ~l~~~L~~~g~-~~~~d~~g~g~~~r~~~~~~~~~~~~l~~~i~~~~~~~----------------~~~~v~lvgHSmGg 151 (283)
.+.++|..+|| ++..|.||.+.|..........-.+|..++|+.+..+. ...+|-++|.|+||
T Consensus 270 ~~~~~~~~rGYaVV~~D~RGtg~SeG~~~~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G 349 (767)
T PRK05371 270 SLNDYFLPRGFAVVYVSGIGTRGSDGCPTTGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLG 349 (767)
T ss_pred hHHHHHHhCCeEEEEEcCCCCCCCCCcCccCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHH
Confidence 46788999999 89999999986543211112334577888888887421 12489999999999
Q ss_pred HHHHHHHHcCChhHHhhhhcceEEecCC
Q psy4395 152 LMCLYFLQRQSSAWKSKFVRSLVSLAAP 179 (283)
Q Consensus 152 ~va~~~~~~~~~~~~~~~v~~~i~i~~p 179 (283)
.++..+|...|+. ++++|.+++.
T Consensus 350 ~~~~~aAa~~pp~-----LkAIVp~a~i 372 (767)
T PRK05371 350 TLPNAVATTGVEG-----LETIIPEAAI 372 (767)
T ss_pred HHHHHHHhhCCCc-----ceEEEeeCCC
Confidence 9999888877665 7888876543
No 274
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=97.28 E-value=0.00067 Score=58.16 Aligned_cols=64 Identities=20% Similarity=0.338 Sum_probs=51.4
Q ss_pred cccccCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH-------H------HHhcCCCcceeeeEEEEECC
Q psy4395 219 YRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE-------I------INERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 219 ~~~~~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~-------~------~~~~~~h~~iv~l~~~~~~~ 282 (283)
.....++|.+.+.+|.|++|.|+++....+++.||+|.+.+.. + ......||||+++++++.++
T Consensus 10 ~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~ 86 (296)
T cd06618 10 YPADLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITD 86 (296)
T ss_pred ccCCcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecC
Confidence 3445678999999999999999999999999999999987421 1 11233599999999998764
No 275
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=97.28 E-value=0.00058 Score=58.73 Aligned_cols=59 Identities=27% Similarity=0.455 Sum_probs=48.7
Q ss_pred cCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH--------H-----HHhcCCCcceeeeEEEEEC
Q psy4395 223 MSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE--------I-----INERMTHQGMILAFTCYRN 281 (283)
Q Consensus 223 ~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~--------~-----~~~~~~h~~iv~l~~~~~~ 281 (283)
..+|.+.+.+|.|++|.||++..+.+++.+|+|.+.... . ....++||||+++++++.+
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 78 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVE 78 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheec
Confidence 578999999999999999999999999999999885321 1 2236899999999987654
No 276
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=97.28 E-value=0.00071 Score=56.70 Aligned_cols=59 Identities=19% Similarity=0.231 Sum_probs=48.5
Q ss_pred CceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH-------HH-----HhcCCCcceeeeEEEEECC
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE-------II-----NERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~-------~~-----~~~~~h~~iv~l~~~~~~~ 282 (283)
++|.+.+.+|.|++|.|+.+....++..+|+|++.+.. +. ...++|+||++++++++++
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 71 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVG 71 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeC
Confidence 36888999999999999999999899999999986421 11 1268999999999988765
No 277
>KOG1553|consensus
Probab=97.27 E-value=0.00096 Score=57.13 Aligned_cols=82 Identities=16% Similarity=0.127 Sum_probs=56.1
Q ss_pred HHHHHHHhCCc-ccCCCcCcCCCCCCCCCCcchHHHHHHHHHHHHHHHH--cCCCCEEEEEeCcccHHHHHHHHcCChhH
Q psy4395 89 YIAAALVGLGY-QRDLSMRGAPYDFRKAPNENQEYFANFKALIEETYDL--NGGTPVVLVAHSMGSLMCLYFLQRQSSAW 165 (283)
Q Consensus 89 ~l~~~L~~~g~-~~~~d~~g~g~~~r~~~~~~~~~~~~l~~~i~~~~~~--~~~~~v~lvgHSmGg~va~~~~~~~~~~~ 165 (283)
.+...=++.|| +...+++|++.+...+-...+..+.| ++++...+. +..+.++|.|+|.||.-+..++..+|+
T Consensus 259 G~m~tP~~lgYsvLGwNhPGFagSTG~P~p~n~~nA~D--aVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd-- 334 (517)
T KOG1553|consen 259 GVMNTPAQLGYSVLGWNHPGFAGSTGLPYPVNTLNAAD--AVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD-- 334 (517)
T ss_pred eeecChHHhCceeeccCCCCccccCCCCCcccchHHHH--HHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC--
Confidence 33444557899 99999999987755443333322222 233332222 345689999999999999999999998
Q ss_pred HhhhhcceEEecC
Q psy4395 166 KSKFVRSLVSLAA 178 (283)
Q Consensus 166 ~~~~v~~~i~i~~ 178 (283)
|+++|+=++
T Consensus 335 ----VkavvLDAt 343 (517)
T KOG1553|consen 335 ----VKAVVLDAT 343 (517)
T ss_pred ----ceEEEeecc
Confidence 888886544
No 278
>PLN02162 triacylglycerol lipase
Probab=97.27 E-value=0.0006 Score=61.09 Aligned_cols=63 Identities=13% Similarity=0.259 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHc---CChhHHhhhhcceEEecCCCCcchh
Q psy4395 123 FANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQR---QSSAWKSKFVRSLVSLAAPWGGSVK 185 (283)
Q Consensus 123 ~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~---~~~~~~~~~v~~~i~i~~p~~g~~~ 185 (283)
+..+.+.++.+..+++..++++.|||+||.+|..++.. .........+.++++.|+|-.|...
T Consensus 261 y~~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa~L~~~~~~~l~~~~~~vYTFGqPRVGn~~ 326 (475)
T PLN02162 261 YYTIRQMLRDKLARNKNLKYILTGHSLGGALAALFPAILAIHGEDELLDKLEGIYTFGQPRVGDED 326 (475)
T ss_pred HHHHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHHHHHHccccccccccceEEEeCCCCccCHH
Confidence 34566667766667777899999999999999876442 2211111125678999999888654
No 279
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=97.26 E-value=0.00066 Score=57.09 Aligned_cols=60 Identities=25% Similarity=0.479 Sum_probs=49.0
Q ss_pred cCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH-----HHH-----hcC-CCcceeeeEEEEECC
Q psy4395 223 MSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE-----IIN-----ERM-THQGMILAFTCYRNP 282 (283)
Q Consensus 223 ~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~-----~~~-----~~~-~h~~iv~l~~~~~~~ 282 (283)
..+|.+.+.++.|++|.|+++..+.+++.+++|++.... +.. .++ .||||++++++|.++
T Consensus 5 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 75 (275)
T cd06608 5 TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKK 75 (275)
T ss_pred hhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEec
Confidence 357899999999999999999999999999999987432 111 244 799999999998754
No 280
>PTZ00284 protein kinase; Provisional
Probab=97.26 E-value=0.00096 Score=61.31 Aligned_cols=60 Identities=22% Similarity=0.314 Sum_probs=46.9
Q ss_pred cCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH-----H-----HHh------cCCCcceeeeEEEEECC
Q psy4395 223 MSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE-----I-----INE------RMTHQGMILAFTCYRNP 282 (283)
Q Consensus 223 ~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~-----~-----~~~------~~~h~~iv~l~~~~~~~ 282 (283)
..+|.+.+.||.|+||+||++.+..+++.||+|++++.. . ..+ ...|+++++++++|+++
T Consensus 128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~ 203 (467)
T PTZ00284 128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNE 203 (467)
T ss_pred CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcC
Confidence 457999999999999999999999999999999996321 0 011 23466799999988764
No 281
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=97.26 E-value=0.00047 Score=60.39 Aligned_cols=58 Identities=21% Similarity=0.318 Sum_probs=47.3
Q ss_pred CceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechH--------HH-----HHhcCCCcceeeeEEEEEC
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKV--------EI-----INERMTHQGMILAFTCYRN 281 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~--------~~-----~~~~~~h~~iv~l~~~~~~ 281 (283)
..|.+.+.+|.|+||.|+.+.+..++..||+|.+.+. .. ....++||||+++++++.+
T Consensus 5 ~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~ 75 (337)
T cd07858 5 TKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPP 75 (337)
T ss_pred cceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheec
Confidence 3688889999999999999999999999999988642 11 1226789999999887754
No 282
>KOG0668|consensus
Probab=97.26 E-value=7.8e-05 Score=60.39 Aligned_cols=62 Identities=23% Similarity=0.394 Sum_probs=51.3
Q ss_pred ccCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeec---hHHHHHh-----cCC-CcceeeeEEEEECCC
Q psy4395 222 QMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLY---KVEIINE-----RMT-HQGMILAFTCYRNPH 283 (283)
Q Consensus 222 ~~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~---~~~~~~~-----~~~-h~~iv~l~~~~~~~~ 283 (283)
..++|++.+.+|+|.++.||.+....+.+.+.+|+++ +.++.++ ++. |||||+|+++..||+
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~ 106 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVKKKKIKREIKILQNLRGGPNIIKLLDIVKDPE 106 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHHHHHHHHHHHHHHhccCCCCeeehhhhhcCcc
Confidence 3578999999999999999999999999988888876 3344333 554 999999999998874
No 283
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=97.26 E-value=0.0002 Score=60.82 Aligned_cols=58 Identities=22% Similarity=0.445 Sum_probs=48.0
Q ss_pred ceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH--------HHH-----hcCCCcceeeeEEEEECC
Q psy4395 225 DFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE--------IIN-----ERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 225 ~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~--------~~~-----~~~~h~~iv~l~~~~~~~ 282 (283)
+|.+.+.+|.|+||.|+++..+.+++.||+|.+.+.. +.+ ..++||||++++++++++
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 72 (286)
T cd07846 2 KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRK 72 (286)
T ss_pred ceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccC
Confidence 5788899999999999999999999999999886421 111 367899999999988765
No 284
>PHA03207 serine/threonine kinase US3; Provisional
Probab=97.25 E-value=0.00058 Score=61.25 Aligned_cols=59 Identities=17% Similarity=0.326 Sum_probs=47.4
Q ss_pred CceeeeeeecccCCeeEEEEEEc--CCCcEEEEEeechHHH------HHhcCCCcceeeeEEEEECC
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEK--TTQIMIALKVLYKVEI------INERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~--~~~~~~A~K~i~~~~~------~~~~~~h~~iv~l~~~~~~~ 282 (283)
.+|.+.+.+|.|+||.||++... .++..+|+|.+.+... ....++|||||+++++|+.+
T Consensus 92 ~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~ 158 (392)
T PHA03207 92 MQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGKTPGREIDILKTISHRAIINLIHAYRWK 158 (392)
T ss_pred CceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccccHHHHHHHHHhcCCCCccceeeeEeeC
Confidence 46999999999999999999765 3567899999875321 23478999999999988764
No 285
>KOG0660|consensus
Probab=97.23 E-value=0.00045 Score=59.31 Aligned_cols=57 Identities=25% Similarity=0.413 Sum_probs=46.4
Q ss_pred ceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechH--------HH-----HHhcCCCcceeeeEEEEEC
Q psy4395 225 DFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKV--------EI-----INERMTHQGMILAFTCYRN 281 (283)
Q Consensus 225 ~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~--------~~-----~~~~~~h~~iv~l~~~~~~ 281 (283)
.|...+.+|.|+||.|..+.++.+|..||+|.|... +. ..+.++|+|||.++++|..
T Consensus 23 ~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p 92 (359)
T KOG0660|consen 23 YYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRP 92 (359)
T ss_pred eecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccc
Confidence 344478999999999999999999999999999732 11 1236789999999999875
No 286
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=97.23 E-value=0.00046 Score=58.34 Aligned_cols=58 Identities=26% Similarity=0.344 Sum_probs=47.8
Q ss_pred ceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH-------HHH-----hcCCCcceeeeEEEEECC
Q psy4395 225 DFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE-------IIN-----ERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 225 ~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~-------~~~-----~~~~h~~iv~l~~~~~~~ 282 (283)
+|.+.+.+|.|++|.||++....+++.+|+|.+.... +.+ ..++||||+++++++.++
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 71 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKG 71 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEEC
Confidence 5677788999999999999999999999999986432 111 267899999999988764
No 287
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=97.22 E-value=0.00082 Score=55.34 Aligned_cols=54 Identities=15% Similarity=0.186 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCChhHHhhhhcceEEecCCC
Q psy4395 125 NFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSSAWKSKFVRSLVSLAAPW 180 (283)
Q Consensus 125 ~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~~~~~~~~v~~~i~i~~p~ 180 (283)
...+.++.+.+.+++ ++++.|||.||.+|.+++...++.. ..+|..+++..+|-
T Consensus 70 ~A~~yl~~~~~~~~~-~i~v~GHSkGGnLA~yaa~~~~~~~-~~rI~~vy~fDgPG 123 (224)
T PF11187_consen 70 SALAYLKKIAKKYPG-KIYVTGHSKGGNLAQYAAANCDDEI-QDRISKVYSFDGPG 123 (224)
T ss_pred HHHHHHHHHHHhCCC-CEEEEEechhhHHHHHHHHHccHHH-hhheeEEEEeeCCC
Confidence 344566666666665 6999999999999999988865542 23488888888874
No 288
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=97.22 E-value=0.00047 Score=58.62 Aligned_cols=58 Identities=22% Similarity=0.435 Sum_probs=48.5
Q ss_pred ceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH--------HHH-----hcCCCcceeeeEEEEECC
Q psy4395 225 DFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE--------IIN-----ERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 225 ~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~--------~~~-----~~~~h~~iv~l~~~~~~~ 282 (283)
+|.+.+.+|.|.+|.|+++..+.+++.||+|.+.... +.. ..++|+||+++++++.++
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 72 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRK 72 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEEC
Confidence 5788899999999999999999999999999987531 222 267899999999998764
No 289
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=97.22 E-value=0.00088 Score=61.80 Aligned_cols=59 Identities=10% Similarity=0.188 Sum_probs=47.4
Q ss_pred CceeeeeeecccCCeeEEEEEEcCC-CcEEEEEeechHH------H-----HHhcCCCcceeeeEEEEECC
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKTT-QIMIALKVLYKVE------I-----INERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~~-~~~~A~K~i~~~~------~-----~~~~~~h~~iv~l~~~~~~~ 282 (283)
..|.+.+.+|+|++|.||++....+ +..+|+|.+.... + ....++|||||+++++|+++
T Consensus 67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~ 137 (478)
T PTZ00267 67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSD 137 (478)
T ss_pred eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEEC
Confidence 3488999999999999999998887 7888998764321 1 12368999999999999875
No 290
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=97.20 E-value=0.001 Score=56.09 Aligned_cols=58 Identities=24% Similarity=0.341 Sum_probs=46.6
Q ss_pred ceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechH----------------HHH-----HhcCCCcceeeeEEEEECC
Q psy4395 225 DFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKV----------------EII-----NERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 225 ~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~----------------~~~-----~~~~~h~~iv~l~~~~~~~ 282 (283)
.|...+.+|.|++|.||++..+.+++.+|+|.+... .+. ...++||||++++++++.+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 80 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTE 80 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccC
Confidence 366778899999999999999999999999987531 111 2267899999999988765
No 291
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=97.20 E-value=0.00058 Score=59.99 Aligned_cols=58 Identities=22% Similarity=0.354 Sum_probs=48.0
Q ss_pred CceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH------H-----HHhcCCCcceeeeEEEEEC
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE------I-----INERMTHQGMILAFTCYRN 281 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~------~-----~~~~~~h~~iv~l~~~~~~ 281 (283)
..|.+.+.+|.|+||.|+++..+.++..||+|.+.... + ...+++||||+++++++.+
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~ 73 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGP 73 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcc
Confidence 57889999999999999999999999999999885421 1 1236899999999877654
No 292
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=97.20 E-value=0.00063 Score=57.29 Aligned_cols=59 Identities=22% Similarity=0.314 Sum_probs=46.0
Q ss_pred CceeeeeeecccCCeeEEEEEEcCCC---cEEEEEeechH-------HHH-----HhcCCCcceeeeEEEEECC
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKTTQ---IMIALKVLYKV-------EII-----NERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~~~---~~~A~K~i~~~-------~~~-----~~~~~h~~iv~l~~~~~~~ 282 (283)
.+|.+.+.+|.|+||.||++..+.++ ..+|+|.+... .+. ...++||||++++++++++
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 77 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKS 77 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecC
Confidence 46788899999999999999887554 37999988642 111 2267899999999998765
No 293
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=97.19 E-value=0.0012 Score=52.05 Aligned_cols=58 Identities=17% Similarity=0.174 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHHHHHc-CCCCEEEEEeCcccHHHHHHHHcCChhHHhhhhcceEEecCCCCcc
Q psy4395 121 EYFANFKALIEETYDLN-GGTPVVLVAHSMGSLMCLYFLQRQSSAWKSKFVRSLVSLAAPWGGS 183 (283)
Q Consensus 121 ~~~~~l~~~i~~~~~~~-~~~~v~lvgHSmGg~va~~~~~~~~~~~~~~~v~~~i~i~~p~~g~ 183 (283)
.-..+|..+++.+...+ +...+.++|||+|+.++-.++...+.. ++.+|++++|=.|.
T Consensus 89 ~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~-----vddvv~~GSPG~g~ 147 (177)
T PF06259_consen 89 AGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLR-----VDDVVLVGSPGMGV 147 (177)
T ss_pred HHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCC-----cccEEEECCCCCCC
Confidence 34456888888888776 666899999999999999988874544 89999999986654
No 294
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=97.19 E-value=0.00067 Score=55.60 Aligned_cols=57 Identities=23% Similarity=0.322 Sum_probs=42.8
Q ss_pred chHHHHHHHHHHHHHHHHc-CCCCEEEEEeCcccHHHHHHHHcCChhHHhhhhcceEEecCCC
Q psy4395 119 NQEYFANFKALIEETYDLN-GGTPVVLVAHSMGSLMCLYFLQRQSSAWKSKFVRSLVSLAAPW 180 (283)
Q Consensus 119 ~~~~~~~l~~~i~~~~~~~-~~~~v~lvgHSmGg~va~~~~~~~~~~~~~~~v~~~i~i~~p~ 180 (283)
.....+.+.++|+...+.. +..+|+|.|.|+||.+++.++..+|.. +.++|.+++..
T Consensus 83 i~~s~~~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~-----~~gvv~lsG~~ 140 (216)
T PF02230_consen 83 IEESAERLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEP-----LAGVVALSGYL 140 (216)
T ss_dssp HHHHHHHHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSST-----SSEEEEES---
T ss_pred HHHHHHHHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcC-----cCEEEEeeccc
Confidence 4455666777777665432 345899999999999999999999987 99999987654
No 295
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=97.19 E-value=0.00048 Score=58.54 Aligned_cols=60 Identities=23% Similarity=0.364 Sum_probs=46.8
Q ss_pred cCceeeeeeecccCCeeEEEEEEcCC-----CcEEEEEeechH-------HH-----HHhcCCCcceeeeEEEEECC
Q psy4395 223 MSDFEVGCPLGTGKFGHVYLAKEKTT-----QIMIALKVLYKV-------EI-----INERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 223 ~~~~~~~~~lg~g~fg~v~~~~~~~~-----~~~~A~K~i~~~-------~~-----~~~~~~h~~iv~l~~~~~~~ 282 (283)
..+|.+.+.+|.|+||.||++....+ +..+|+|.+... .+ ....++||||++++++++++
T Consensus 4 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~ 80 (283)
T cd05091 4 LSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKE 80 (283)
T ss_pred HHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCC
Confidence 45788889999999999999987643 478999999732 11 12368999999999988764
No 296
>PLN02408 phospholipase A1
Probab=97.18 E-value=0.00073 Score=59.16 Aligned_cols=62 Identities=15% Similarity=0.253 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHHcCCC--CEEEEEeCcccHHHHHHHHcCChhHHhhhhcceEEecCCCCcchh
Q psy4395 124 ANFKALIEETYDLNGGT--PVVLVAHSMGSLMCLYFLQRQSSAWKSKFVRSLVSLAAPWGGSVK 185 (283)
Q Consensus 124 ~~l~~~i~~~~~~~~~~--~v~lvgHSmGg~va~~~~~~~~~~~~~~~v~~~i~i~~p~~g~~~ 185 (283)
+++.+.|..+.+.++.. ++++.||||||.+|..++......+....+-.+++.++|-.|...
T Consensus 182 ~qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl~~~~~~~~~V~v~tFGsPRVGN~~ 245 (365)
T PLN02408 182 EMVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDIKTTFKRAPMVTVISFGGPRVGNRS 245 (365)
T ss_pred HHHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHHHHhcCCCCceEEEEcCCCCcccHH
Confidence 45556666666666653 599999999999998877653332211112347888999888644
No 297
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=97.18 E-value=0.0011 Score=55.51 Aligned_cols=58 Identities=17% Similarity=0.387 Sum_probs=46.5
Q ss_pred cCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH-----HHH-----hcCCCcceeeeEEEEEC
Q psy4395 223 MSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE-----IIN-----ERMTHQGMILAFTCYRN 281 (283)
Q Consensus 223 ~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~-----~~~-----~~~~h~~iv~l~~~~~~ 281 (283)
.++|.+.+.+|.|+||.|+++..+ ++..||+|.+.+.. +.. .+++||||++++++++.
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 72 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYAVVTQ 72 (260)
T ss_pred hHHceeeeeeccCccceEEeeecC-CCceEEEEEecCCCCcHHHHHHHHHHHHhcCCcCeeeEEEEEcc
Confidence 467899999999999999999865 56789999887532 222 36899999999998754
No 298
>KOG1006|consensus
Probab=97.18 E-value=8.8e-05 Score=61.38 Aligned_cols=61 Identities=15% Similarity=0.248 Sum_probs=48.8
Q ss_pred cccccCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHHH-------------HHhcCCCcceeeeEEEE
Q psy4395 219 YRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI-------------INERMTHQGMILAFTCY 279 (283)
Q Consensus 219 ~~~~~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~-------------~~~~~~h~~iv~l~~~~ 279 (283)
..++.++++-...+|.|+||+|.+..++.+|+..|+|.|+.... ....-+.||||++|++.
T Consensus 59 ~~F~~~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~ 132 (361)
T KOG1006|consen 59 HTFTSDNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGAL 132 (361)
T ss_pred cccccchHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhh
Confidence 44556677777899999999999999999999999999975422 11256799999999854
No 299
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=97.17 E-value=0.0009 Score=57.48 Aligned_cols=59 Identities=17% Similarity=0.250 Sum_probs=49.1
Q ss_pred CceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH------HH-----HhcCCCcceeeeEEEEECC
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE------II-----NERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~------~~-----~~~~~h~~iv~l~~~~~~~ 282 (283)
..|.+.+.+|.|.+|.||.+....+++.+|+|.+.... +. ...++||||++++++|.++
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 88 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVG 88 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecC
Confidence 46889999999999999999999999999999886431 11 1368999999999998764
No 300
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=97.17 E-value=0.00075 Score=56.53 Aligned_cols=59 Identities=24% Similarity=0.363 Sum_probs=46.1
Q ss_pred cCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH-----HH-----HhcCCCcceeeeEEEEECC
Q psy4395 223 MSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE-----II-----NERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 223 ~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~-----~~-----~~~~~h~~iv~l~~~~~~~ 282 (283)
..+|.+.+.+|.|+||.||++... .+..+|+|.+.... +. ..+++||||++++++++++
T Consensus 3 ~~~~~~~~~lg~G~~~~vy~~~~~-~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 71 (256)
T cd05113 3 PKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQ 71 (256)
T ss_pred hHHeEEeeEecCcccceEEEEEec-CCCcEEEEEcCCCcccHHHHHHHHHHHhcCCCCCeeeEEEEEccC
Confidence 357889999999999999999765 34569999887532 11 2378999999999988754
No 301
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=97.16 E-value=0.001 Score=53.64 Aligned_cols=85 Identities=21% Similarity=0.326 Sum_probs=51.1
Q ss_pred HHHHHHhCCcccCCCcCcCC-CCCC-CCCC----cchHHHHHHHHHHHHHHHHc-CCCCEEEEEeCcccHHHHHHHHcC-
Q psy4395 90 IAAALVGLGYQRDLSMRGAP-YDFR-KAPN----ENQEYFANFKALIEETYDLN-GGTPVVLVAHSMGSLMCLYFLQRQ- 161 (283)
Q Consensus 90 l~~~L~~~g~~~~~d~~g~g-~~~r-~~~~----~~~~~~~~l~~~i~~~~~~~-~~~~v~lvgHSmGg~va~~~~~~~- 161 (283)
.+..+...+-++++=.|-.. +.+. .... ..+--+.|+.+..+...+++ +++|++|+|||.|+.+.+.++.+.
T Consensus 38 qas~F~~~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~~ 117 (207)
T PF11288_consen 38 QASAFNGVCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEEI 117 (207)
T ss_pred HhhhhhcCCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHHh
Confidence 34444444445555555433 2222 1111 23444678888877776654 567999999999999999999874
Q ss_pred -ChhHHhhhhcceE
Q psy4395 162 -SSAWKSKFVRSLV 174 (283)
Q Consensus 162 -~~~~~~~~v~~~i 174 (283)
++.-.++.|.+++
T Consensus 118 ~~~pl~~rLVAAYl 131 (207)
T PF11288_consen 118 AGDPLRKRLVAAYL 131 (207)
T ss_pred cCchHHhhhheeee
Confidence 3333344455444
No 302
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=97.15 E-value=0.0015 Score=54.70 Aligned_cols=58 Identities=22% Similarity=0.296 Sum_probs=48.5
Q ss_pred ceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH-------HHH-----hcCCCcceeeeEEEEECC
Q psy4395 225 DFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE-------IIN-----ERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 225 ~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~-------~~~-----~~~~h~~iv~l~~~~~~~ 282 (283)
+|.+.+.+|.|++|.++++..+.++..|++|.+.... +.. ..++||||+++++++.++
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 71 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKE 71 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccC
Confidence 6788899999999999999999999999999987542 111 267899999999988764
No 303
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=97.15 E-value=0.00096 Score=56.75 Aligned_cols=82 Identities=13% Similarity=0.029 Sum_probs=57.6
Q ss_pred HHHhCCc-ccCCCcCcCCCCCCCCCCcchHHHHHHHHHHHHHHHHc-CCCCEEEEEeCcccHHHHHHHHcCChhHHhhhh
Q psy4395 93 ALVGLGY-QRDLSMRGAPYDFRKAPNENQEYFANFKALIEETYDLN-GGTPVVLVAHSMGSLMCLYFLQRQSSAWKSKFV 170 (283)
Q Consensus 93 ~L~~~g~-~~~~d~~g~g~~~r~~~~~~~~~~~~l~~~i~~~~~~~-~~~~v~lvgHSmGg~va~~~~~~~~~~~~~~~v 170 (283)
.++++|| ++..|.||.|.|...-......-.+|..++|+-+.++- ..-+|-++|.|.+|..+..++...|.. +
T Consensus 52 ~~~~~GY~vV~~D~RG~g~S~G~~~~~~~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~-----L 126 (272)
T PF02129_consen 52 PFAERGYAVVVQDVRGTGGSEGEFDPMSPNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPH-----L 126 (272)
T ss_dssp HHHHTT-EEEEEE-TTSTTS-S-B-TTSHHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TT-----E
T ss_pred HHHhCCCEEEEECCcccccCCCccccCChhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCC-----c
Confidence 3889999 89999999987643221214445678888999887751 122899999999999999999977765 8
Q ss_pred cceEEecCC
Q psy4395 171 RSLVSLAAP 179 (283)
Q Consensus 171 ~~~i~i~~p 179 (283)
++++...++
T Consensus 127 kAi~p~~~~ 135 (272)
T PF02129_consen 127 KAIVPQSGW 135 (272)
T ss_dssp EEEEEESE-
T ss_pred eEEEecccC
Confidence 888876543
No 304
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=97.14 E-value=0.00079 Score=57.72 Aligned_cols=59 Identities=22% Similarity=0.272 Sum_probs=48.8
Q ss_pred CceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH------HH-----HhcCCCcceeeeEEEEECC
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE------II-----NERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~------~~-----~~~~~h~~iv~l~~~~~~~ 282 (283)
..|.+.+.+|.|+||.||++....++..||+|.+.... +. ..+++||||++++++++.+
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~ 88 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVG 88 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeC
Confidence 57888899999999999999999899999999986421 11 2367899999999988764
No 305
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=97.14 E-value=0.00057 Score=68.52 Aligned_cols=57 Identities=18% Similarity=0.261 Sum_probs=46.5
Q ss_pred eeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH------H-HHhcCCCcceeeeEEEEECC
Q psy4395 226 FEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE------I-INERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 226 ~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~------~-~~~~~~h~~iv~l~~~~~~~ 282 (283)
+.....+|+|+||.||+++.+.++..||+|.+.... + ...+++|||||+++++++++
T Consensus 692 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~l~~l~HpnIv~~~~~~~~~ 755 (968)
T PLN00113 692 LKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSIPSSEIADMGKLQHPNIVKLIGLCRSE 755 (968)
T ss_pred CCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccccHHHHHHHhhCCCCCcceEEEEEEcC
Confidence 444567999999999999999999999999986421 1 22478999999999999875
No 306
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=97.14 E-value=0.0011 Score=55.24 Aligned_cols=59 Identities=29% Similarity=0.422 Sum_probs=49.6
Q ss_pred CceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH----HHH-----hcCCCcceeeeEEEEECC
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE----IIN-----ERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~----~~~-----~~~~h~~iv~l~~~~~~~ 282 (283)
++|.+.+.++.|.||.|+++..+.++..|++|.+.... +.+ ..++||||+++++++.++
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~ 70 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEEDLQEIIKEISILKQCDSPYIVKYYGSYFKN 70 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecC
Confidence 56888889999999999999999999999999998543 222 267999999999998765
No 307
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=97.14 E-value=0.00033 Score=61.26 Aligned_cols=58 Identities=21% Similarity=0.267 Sum_probs=48.2
Q ss_pred CceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH--------H-----HHhcCCCcceeeeEEEEEC
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE--------I-----INERMTHQGMILAFTCYRN 281 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~--------~-----~~~~~~h~~iv~l~~~~~~ 281 (283)
++|.+.+.+|.|++|.|+++..+.++..||+|.+.... + ....++||||++++++|+.
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~ 75 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRP 75 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccc
Confidence 57888899999999999999999999999999987531 1 1236789999999988764
No 308
>KOG1026|consensus
Probab=97.14 E-value=0.0002 Score=67.75 Aligned_cols=62 Identities=26% Similarity=0.403 Sum_probs=48.0
Q ss_pred ccccCceeeeeeecccCCeeEEEEEEcCC-----CcEEEEEeechHH-------HHHh-----cCCCcceeeeEEEEEC
Q psy4395 220 RWQMSDFEVGCPLGTGKFGHVYLAKEKTT-----QIMIALKVLYKVE-------IINE-----RMTHQGMILAFTCYRN 281 (283)
Q Consensus 220 ~~~~~~~~~~~~lg~g~fg~v~~~~~~~~-----~~~~A~K~i~~~~-------~~~~-----~~~h~~iv~l~~~~~~ 281 (283)
.....+....+.+|+|.||+||+++-... -+.||||.++... +.+| .++|||||+|+++-..
T Consensus 482 ~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~ 560 (774)
T KOG1026|consen 482 EIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCRE 560 (774)
T ss_pred EechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEcc
Confidence 34566788889999999999999987643 2579999998643 2222 7999999999997544
No 309
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=97.13 E-value=0.00079 Score=57.09 Aligned_cols=61 Identities=20% Similarity=0.194 Sum_probs=47.6
Q ss_pred ccCceeeeeeecccCCeeEEEEEEcCCCc----EEEEEeechHH-------H-----HHhcCCCcceeeeEEEEECC
Q psy4395 222 QMSDFEVGCPLGTGKFGHVYLAKEKTTQI----MIALKVLYKVE-------I-----INERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 222 ~~~~~~~~~~lg~g~fg~v~~~~~~~~~~----~~A~K~i~~~~-------~-----~~~~~~h~~iv~l~~~~~~~ 282 (283)
...+|.+.+.+|.|+||.||+++...++. .||+|.+.... + ....+.||||+++++++.++
T Consensus 5 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~ 81 (279)
T cd05109 5 KETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS 81 (279)
T ss_pred chhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC
Confidence 45689999999999999999999887775 48999886321 1 12367899999999887653
No 310
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=97.13 E-value=0.00082 Score=58.08 Aligned_cols=53 Identities=30% Similarity=0.535 Sum_probs=41.6
Q ss_pred eeeecccCCeeEEEEEEcC--CCcEEEEEeechHH----H-----HHhcCCCcceeeeEEEEEC
Q psy4395 229 GCPLGTGKFGHVYLAKEKT--TQIMIALKVLYKVE----I-----INERMTHQGMILAFTCYRN 281 (283)
Q Consensus 229 ~~~lg~g~fg~v~~~~~~~--~~~~~A~K~i~~~~----~-----~~~~~~h~~iv~l~~~~~~ 281 (283)
...+|.|+||.||+++.+. ++..||+|.+.... . ....++||||++++++|.+
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 69 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSACREIALLRELKHPNVIALQKVFLS 69 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCCcHHHHHHHHHHHhCCCCCeeeEEEEEec
Confidence 3578999999999999764 56789999987531 2 2236899999999998854
No 311
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=97.13 E-value=0.00054 Score=58.56 Aligned_cols=60 Identities=23% Similarity=0.346 Sum_probs=49.0
Q ss_pred cCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH--------H-----HHhcCCCcceeeeEEEEECC
Q psy4395 223 MSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE--------I-----INERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 223 ~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~--------~-----~~~~~~h~~iv~l~~~~~~~ 282 (283)
..+|.+.+.+|.|.||.|+.+..+.+++.+|+|.+.... + ....++||||+++++++.++
T Consensus 4 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~ 76 (293)
T cd07843 4 VDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGS 76 (293)
T ss_pred hhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEec
Confidence 357888899999999999999999999999999996321 1 12367899999999988754
No 312
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=97.13 E-value=0.00089 Score=56.58 Aligned_cols=58 Identities=22% Similarity=0.275 Sum_probs=45.0
Q ss_pred ceeeeee--ecccCCeeEEEEEEcCCCcEEEEEeechHHH-----HHh--cCCCcceeeeEEEEECC
Q psy4395 225 DFEVGCP--LGTGKFGHVYLAKEKTTQIMIALKVLYKVEI-----INE--RMTHQGMILAFTCYRNP 282 (283)
Q Consensus 225 ~~~~~~~--lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~-----~~~--~~~h~~iv~l~~~~~~~ 282 (283)
.+.+.+. +|.|+||.|+++..+.++..+|+|.+.+... ... ..+||||++++++|.++
T Consensus 15 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~ 81 (267)
T PHA03390 15 NCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAIEPMVHQLMKDNPNFIKLYYSVTTL 81 (267)
T ss_pred hhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchhhHHHHHHhhcCCCEEEEEEEEecC
Confidence 3444444 5999999999999999999999999986431 111 23799999999999875
No 313
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=97.12 E-value=0.0017 Score=55.37 Aligned_cols=58 Identities=21% Similarity=0.289 Sum_probs=46.9
Q ss_pred ceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH--------HHH-----hcC-CCcceeeeEEEEECC
Q psy4395 225 DFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE--------IIN-----ERM-THQGMILAFTCYRNP 282 (283)
Q Consensus 225 ~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~--------~~~-----~~~-~h~~iv~l~~~~~~~ 282 (283)
+|.+.+.+|.|+||.||++....+++.||+|.+.... +.+ .++ +||||++++++++.+
T Consensus 2 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~ 73 (295)
T cd07837 2 AYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVE 73 (295)
T ss_pred CceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeec
Confidence 5778899999999999999999999999999886431 111 144 579999999988764
No 314
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=97.12 E-value=0.0013 Score=56.63 Aligned_cols=62 Identities=19% Similarity=0.337 Sum_probs=47.3
Q ss_pred cccCceeeeeeecccCCeeEEEEEEcCCCcE--EEEEeechH-------HHHH-----hcC-CCcceeeeEEEEECC
Q psy4395 221 WQMSDFEVGCPLGTGKFGHVYLAKEKTTQIM--IALKVLYKV-------EIIN-----ERM-THQGMILAFTCYRNP 282 (283)
Q Consensus 221 ~~~~~~~~~~~lg~g~fg~v~~~~~~~~~~~--~A~K~i~~~-------~~~~-----~~~-~h~~iv~l~~~~~~~ 282 (283)
...++|.+.+.+|.|+||.|+++..+.++.. +|+|.+... .+.+ .++ +||||+++++++++.
T Consensus 4 ~~~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~ 80 (303)
T cd05088 4 LEWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR 80 (303)
T ss_pred cchhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCC
Confidence 3456899999999999999999999887754 577766531 1111 256 899999999998764
No 315
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=97.12 E-value=0.00067 Score=57.80 Aligned_cols=60 Identities=20% Similarity=0.330 Sum_probs=47.4
Q ss_pred cCceeeeeeecccCCeeEEEEEEcC-----CCcEEEEEeechHH-------HHH-----hcCCCcceeeeEEEEECC
Q psy4395 223 MSDFEVGCPLGTGKFGHVYLAKEKT-----TQIMIALKVLYKVE-------IIN-----ERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 223 ~~~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~A~K~i~~~~-------~~~-----~~~~h~~iv~l~~~~~~~ 282 (283)
..+|...+.+|.|+||.|++++.+. ++..+|+|.+.... +.+ .+++||||++++++++++
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~ 80 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVG 80 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCC
Confidence 4578889999999999999998753 56789999986421 211 267999999999988764
No 316
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=97.11 E-value=0.00085 Score=56.54 Aligned_cols=60 Identities=20% Similarity=0.302 Sum_probs=47.5
Q ss_pred cCceeeeeeecccCCeeEEEEEEcCCCc---EEEEEeechH-------HHH-----HhcCCCcceeeeEEEEECC
Q psy4395 223 MSDFEVGCPLGTGKFGHVYLAKEKTTQI---MIALKVLYKV-------EII-----NERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 223 ~~~~~~~~~lg~g~fg~v~~~~~~~~~~---~~A~K~i~~~-------~~~-----~~~~~h~~iv~l~~~~~~~ 282 (283)
..++.+.+.+|.|+||.||++..+.++. .||+|.+.+. .+. ...++||||+++++++.++
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~ 77 (269)
T cd05065 3 VSCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKS 77 (269)
T ss_pred hHHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCC
Confidence 3568889999999999999999887664 6999998742 111 2368999999999998764
No 317
>KOG0194|consensus
Probab=97.10 E-value=0.00095 Score=60.56 Aligned_cols=63 Identities=24% Similarity=0.393 Sum_probs=46.3
Q ss_pred cccccCceeeeeeecccCCeeEEEEEEcCCCc---E-EEEEeechH------H---H-----HHhcCCCcceeeeEEEEE
Q psy4395 219 YRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQI---M-IALKVLYKV------E---I-----INERMTHQGMILAFTCYR 280 (283)
Q Consensus 219 ~~~~~~~~~~~~~lg~g~fg~v~~~~~~~~~~---~-~A~K~i~~~------~---~-----~~~~~~h~~iv~l~~~~~ 280 (283)
..+..++-.+.+.+|+|+||.|+.++.+..+. . ||+|..... . + ..++++|||||++|++-.
T Consensus 152 Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~ 231 (474)
T KOG0194|consen 152 WELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAV 231 (474)
T ss_pred cEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc
Confidence 34455677778999999999999999876432 3 899888741 1 1 123699999999999654
Q ss_pred C
Q psy4395 281 N 281 (283)
Q Consensus 281 ~ 281 (283)
+
T Consensus 232 ~ 232 (474)
T KOG0194|consen 232 L 232 (474)
T ss_pred C
Confidence 4
No 318
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=97.10 E-value=0.0019 Score=51.37 Aligned_cols=60 Identities=25% Similarity=0.261 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHc--CChhHHhhhhcceEEecCCCCcc
Q psy4395 123 FANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQR--QSSAWKSKFVRSLVSLAAPWGGS 183 (283)
Q Consensus 123 ~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~--~~~~~~~~~v~~~i~i~~p~~g~ 183 (283)
..++...|+....+.++.+++|+|+|.|+.|+..++.. .+.. ...+|.++++++-|....
T Consensus 64 ~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~-~~~~I~avvlfGdP~~~~ 125 (179)
T PF01083_consen 64 VANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPD-VADRIAAVVLFGDPRRGA 125 (179)
T ss_dssp HHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHH-HHHHEEEEEEES-TTTBT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChh-hhhhEEEEEEecCCcccC
Confidence 45678888888888899999999999999999999887 4443 234599999999987643
No 319
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=97.10 E-value=0.0011 Score=56.05 Aligned_cols=61 Identities=16% Similarity=0.257 Sum_probs=47.6
Q ss_pred ccCceeeeeeecccCCeeEEEEEEcCC-----CcEEEEEeechHH-------HH-----HhcCCCcceeeeEEEEECC
Q psy4395 222 QMSDFEVGCPLGTGKFGHVYLAKEKTT-----QIMIALKVLYKVE-------II-----NERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 222 ~~~~~~~~~~lg~g~fg~v~~~~~~~~-----~~~~A~K~i~~~~-------~~-----~~~~~h~~iv~l~~~~~~~ 282 (283)
..++|.+.+.+|.|+||.||++..+.. +..||+|.+.... +. ...++||||++++++++++
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~ 81 (277)
T cd05032 4 PREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTG 81 (277)
T ss_pred chHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCC
Confidence 346888999999999999999988753 3789999986431 11 1267899999999988764
No 320
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=97.09 E-value=0.0014 Score=57.24 Aligned_cols=55 Identities=24% Similarity=0.406 Sum_probs=44.7
Q ss_pred eeeeecccCCeeEEEEEEcCCCcEEEEEeechHH--------------------HH-----HhcCCCcceeeeEEEEECC
Q psy4395 228 VGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE--------------------II-----NERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 228 ~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~--------------------~~-----~~~~~h~~iv~l~~~~~~~ 282 (283)
+.+.+|.|+||.||++.++.+++.||+|.+.+.. +. ...++||||++++++|.++
T Consensus 13 ~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 92 (335)
T PTZ00024 13 KGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEG 92 (335)
T ss_pred hhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecC
Confidence 3567999999999999999999999999886431 11 2368899999999998765
No 321
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=97.09 E-value=0.0014 Score=55.68 Aligned_cols=58 Identities=21% Similarity=0.307 Sum_probs=45.1
Q ss_pred CceeeeeeecccCCeeEEEEEE----cCCCcEEEEEeechH------HHHH-----hcCCCcceeeeEEEEEC
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKE----KTTQIMIALKVLYKV------EIIN-----ERMTHQGMILAFTCYRN 281 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~----~~~~~~~A~K~i~~~------~~~~-----~~~~h~~iv~l~~~~~~ 281 (283)
.++.+.+.+|.|+||.||.+.. ..++..||+|.+... .+.. ..++||||+++++++..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~ 76 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYS 76 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEcc
Confidence 4678889999999999999984 457889999998642 1222 26899999999987643
No 322
>KOG0607|consensus
Probab=97.07 E-value=0.0001 Score=62.47 Aligned_cols=54 Identities=19% Similarity=0.269 Sum_probs=46.2
Q ss_pred eeecccCCeeEEEEEEcCCCcEEEEEeechHH------HHHh------cCCCcceeeeEEEEECCC
Q psy4395 230 CPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE------IINE------RMTHQGMILAFTCYRNPH 283 (283)
Q Consensus 230 ~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~------~~~~------~~~h~~iv~l~~~~~~~~ 283 (283)
..+|.|+|+.|.-+....+|..||+|+|.|.. +.++ ...|+||+.|++.|||+.
T Consensus 84 e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~ 149 (463)
T KOG0607|consen 84 ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDT 149 (463)
T ss_pred HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccc
Confidence 36899999999999999999999999999852 3332 568999999999999873
No 323
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=97.06 E-value=0.0012 Score=55.22 Aligned_cols=60 Identities=17% Similarity=0.382 Sum_probs=48.1
Q ss_pred ccCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH-----HH-----HhcCCCcceeeeEEEEECC
Q psy4395 222 QMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE-----II-----NERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 222 ~~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~-----~~-----~~~~~h~~iv~l~~~~~~~ 282 (283)
..++|.+.+.+|.|++|.||++... .+..+|+|.+.... +. ..+++||||+++++++++.
T Consensus 4 ~~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 73 (261)
T cd05034 4 PRESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEE 73 (261)
T ss_pred chhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCccCHHHHHHHHHHHhhCCCCCEeeeeeeeecC
Confidence 4568999999999999999999875 45779999987532 22 2378999999999998764
No 324
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=97.06 E-value=0.003 Score=57.89 Aligned_cols=64 Identities=11% Similarity=0.192 Sum_probs=44.9
Q ss_pred CCcccCCCc-CcCCCCCCCC---CCcchHHHHHHHHHHHHHHHHcCC---CCEEEEEeCcccHHHHHHHHc
Q psy4395 97 LGYQRDLSM-RGAPYDFRKA---PNENQEYFANFKALIEETYDLNGG---TPVVLVAHSMGSLMCLYFLQR 160 (283)
Q Consensus 97 ~g~~~~~d~-~g~g~~~r~~---~~~~~~~~~~l~~~i~~~~~~~~~---~~v~lvgHSmGg~va~~~~~~ 160 (283)
...++-+|. +|+|++.-.. ....+..++|+..+++.+.++++. .|++|+||||||..+..++..
T Consensus 121 ~~~~l~iDqP~G~G~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~ 191 (462)
T PTZ00472 121 EAYVIYVDQPAGVGFSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYR 191 (462)
T ss_pred ccCeEEEeCCCCcCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHH
Confidence 344444565 5888664221 123466788888888888766553 799999999999988777665
No 325
>KOG2345|consensus
Probab=97.06 E-value=0.00019 Score=58.85 Aligned_cols=56 Identities=20% Similarity=0.283 Sum_probs=45.3
Q ss_pred ccCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH------HHH-----hcCCCcceeeeEE
Q psy4395 222 QMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE------IIN-----ERMTHQGMILAFT 277 (283)
Q Consensus 222 ~~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~------~~~-----~~~~h~~iv~l~~ 277 (283)
+-..|.+.+.+|.|+|+.|++++..+++..||+|.|.=.. ..+ ++.+|||++++++
T Consensus 19 n~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~d 85 (302)
T KOG2345|consen 19 NNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVD 85 (302)
T ss_pred cCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHH
Confidence 3457999999999999999999999999999999885221 111 2688999998764
No 326
>PLN02454 triacylglycerol lipase
Probab=97.06 E-value=0.0014 Score=58.17 Aligned_cols=63 Identities=17% Similarity=0.144 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHHHHcCCCC--EEEEEeCcccHHHHHHHHcCChhHH---hhhhcceEEecCCCCcchh
Q psy4395 122 YFANFKALIEETYDLNGGTP--VVLVAHSMGSLMCLYFLQRQSSAWK---SKFVRSLVSLAAPWGGSVK 185 (283)
Q Consensus 122 ~~~~l~~~i~~~~~~~~~~~--v~lvgHSmGg~va~~~~~~~~~~~~---~~~v~~~i~i~~p~~g~~~ 185 (283)
..+++.+.|..+.+.++..+ |++.||||||.+|..++...-.... ...|. ++++++|-.|...
T Consensus 208 ~r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~di~~~g~~~~~~~V~-~~TFGsPRVGN~~ 275 (414)
T PLN02454 208 ARSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFDIVENGVSGADIPVT-AIVFGSPQVGNKE 275 (414)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHHHHHhcccccCCceE-EEEeCCCcccCHH
Confidence 44567777777777776655 9999999999999888754211100 01133 4778999888644
No 327
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=97.06 E-value=0.00076 Score=59.02 Aligned_cols=60 Identities=20% Similarity=0.457 Sum_probs=48.2
Q ss_pred cCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechH--------HH-----HHhcC-CCcceeeeEEEEECC
Q psy4395 223 MSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKV--------EI-----INERM-THQGMILAFTCYRNP 282 (283)
Q Consensus 223 ~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~--------~~-----~~~~~-~h~~iv~l~~~~~~~ 282 (283)
.++|.+.+.+|.|+||.|+++..+.++..+|+|.+.+. .+ ....+ +||||++++++|..+
T Consensus 6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~ 79 (337)
T cd07852 6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAE 79 (337)
T ss_pred hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccC
Confidence 35688888999999999999999999999999988532 01 12367 999999999988653
No 328
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=97.05 E-value=0.003 Score=51.75 Aligned_cols=51 Identities=14% Similarity=0.099 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHcC--CCCEEEEEeCcccHHHHHHHHcCChhHHhhhhcceEEecCC
Q psy4395 124 ANFKALIEETYDLNG--GTPVVLVAHSMGSLMCLYFLQRQSSAWKSKFVRSLVSLAAP 179 (283)
Q Consensus 124 ~~l~~~i~~~~~~~~--~~~v~lvgHSmGg~va~~~~~~~~~~~~~~~v~~~i~i~~p 179 (283)
..+.++|+.+..+++ ..+|++.|+|.||.++..++..+|+. +.++..++++
T Consensus 79 ~~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~-----faa~a~~sG~ 131 (220)
T PF10503_consen 79 AFIAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDL-----FAAVAVVSGV 131 (220)
T ss_pred hhHHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCcc-----ceEEEeeccc
Confidence 446677777766653 34899999999999999999999997 7776666544
No 329
>PRK10115 protease 2; Provisional
Probab=97.05 E-value=0.0014 Score=63.04 Aligned_cols=88 Identities=11% Similarity=0.234 Sum_probs=63.7
Q ss_pred hHHHHHHHHHhCCc-ccCCCcCcC---CCCCCCCCC--cchHHHHHHHHHHHHHHHHc--CCCCEEEEEeCcccHHHHHH
Q psy4395 86 YFSYIAAALVGLGY-QRDLSMRGA---PYDFRKAPN--ENQEYFANFKALIEETYDLN--GGTPVVLVAHSMGSLMCLYF 157 (283)
Q Consensus 86 ~~~~l~~~L~~~g~-~~~~d~~g~---g~~~r~~~~--~~~~~~~~l~~~i~~~~~~~--~~~~v~lvgHSmGg~va~~~ 157 (283)
.|......|.++|| +...+.||- |..|+.... .....++|+.+.++.+.++. ...++.+.|-|.||+++..+
T Consensus 462 ~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~ 541 (686)
T PRK10115 462 DFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVA 541 (686)
T ss_pred CccHHHHHHHHCCcEEEEEEcCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHH
Confidence 45566678899999 777899994 456644211 12234678888888876652 23489999999999999999
Q ss_pred HHcCChhHHhhhhcceEEecC
Q psy4395 158 LQRQSSAWKSKFVRSLVSLAA 178 (283)
Q Consensus 158 ~~~~~~~~~~~~v~~~i~i~~ 178 (283)
+..+|+. .++.|+..+
T Consensus 542 ~~~~Pdl-----f~A~v~~vp 557 (686)
T PRK10115 542 INQRPEL-----FHGVIAQVP 557 (686)
T ss_pred HhcChhh-----eeEEEecCC
Confidence 9999997 677776543
No 330
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=97.05 E-value=0.0012 Score=55.59 Aligned_cols=59 Identities=22% Similarity=0.290 Sum_probs=46.4
Q ss_pred CceeeeeeecccCCeeEEEEEEcCC---CcEEEEEeechHH-------HH-----HhcCCCcceeeeEEEEECC
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKTT---QIMIALKVLYKVE-------II-----NERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~~---~~~~A~K~i~~~~-------~~-----~~~~~h~~iv~l~~~~~~~ 282 (283)
++|.+...+|.|+||.||.+..+.+ ...+|+|.+.... +. ..+++||||+++++.+++.
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 77 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKS 77 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecC
Confidence 5788899999999999999998754 4579999986421 11 2368999999999988764
No 331
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=97.04 E-value=0.0012 Score=56.31 Aligned_cols=60 Identities=17% Similarity=0.293 Sum_probs=46.0
Q ss_pred cCceeeeeeecccCCeeEEEEEEcC-----CCcEEEEEeechHH-------H-----HHhcCCCcceeeeEEEEECC
Q psy4395 223 MSDFEVGCPLGTGKFGHVYLAKEKT-----TQIMIALKVLYKVE-------I-----INERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 223 ~~~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~A~K~i~~~~-------~-----~~~~~~h~~iv~l~~~~~~~ 282 (283)
.++|.+.+.+|.|+||.||++..+. .+..||+|.+.... + ....++||||+++++++.++
T Consensus 5 ~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 81 (288)
T cd05061 5 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKG 81 (288)
T ss_pred HHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence 4578899999999999999987652 34579999876321 1 12367999999999988765
No 332
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=97.04 E-value=0.0016 Score=54.76 Aligned_cols=57 Identities=23% Similarity=0.381 Sum_probs=45.4
Q ss_pred eeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH------HH-----HhcCCCcceeeeEEEEECC
Q psy4395 226 FEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE------II-----NERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 226 ~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~------~~-----~~~~~h~~iv~l~~~~~~~ 282 (283)
+.....+|.|+||.||.+....++..||+|.+.... +. ...++||||+++++++.++
T Consensus 10 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 77 (268)
T cd06624 10 NGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSEN 77 (268)
T ss_pred CCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccC
Confidence 334457999999999999999999999999886431 11 2368999999999988764
No 333
>PLN02934 triacylglycerol lipase
Probab=97.04 E-value=0.0019 Score=58.60 Aligned_cols=63 Identities=14% Similarity=0.246 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHc---CChhHHhhhhcceEEecCCCCcchh
Q psy4395 123 FANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQR---QSSAWKSKFVRSLVSLAAPWGGSVK 185 (283)
Q Consensus 123 ~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~---~~~~~~~~~v~~~i~i~~p~~g~~~ 185 (283)
+..+...|+.+.++++..++++.|||+||.+|..++.. ..+......+..+++.|+|-.|...
T Consensus 304 y~~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~~L~l~~~~~~l~~~~~vYTFGsPRVGN~~ 369 (515)
T PLN02934 304 YYAVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPTVLVLQEETEVMKRLLGVYTFGQPRIGNRQ 369 (515)
T ss_pred HHHHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHHHHHHhcccccccCceEEEEeCCCCccCHH
Confidence 44577778888888888899999999999999877543 1111000113467888999888644
No 334
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=97.03 E-value=0.00078 Score=57.18 Aligned_cols=61 Identities=20% Similarity=0.302 Sum_probs=48.0
Q ss_pred ccCceeeeeeecccCCeeEEEEEEcCCC-----cEEEEEeechHH-------HH-----HhcCCCcceeeeEEEEECC
Q psy4395 222 QMSDFEVGCPLGTGKFGHVYLAKEKTTQ-----IMIALKVLYKVE-------II-----NERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 222 ~~~~~~~~~~lg~g~fg~v~~~~~~~~~-----~~~A~K~i~~~~-------~~-----~~~~~h~~iv~l~~~~~~~ 282 (283)
...+|.+.+.+|.|+||.||++.....+ ..+|+|.+.... +. ...++||||+++++++.+.
T Consensus 3 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~ 80 (283)
T cd05048 3 PLSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKE 80 (283)
T ss_pred ChHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCC
Confidence 4568899999999999999999876554 679999986421 11 2368999999999988754
No 335
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=97.03 E-value=0.0014 Score=56.40 Aligned_cols=60 Identities=23% Similarity=0.342 Sum_probs=47.0
Q ss_pred cCceeeeeeecccCCeeEEEEEEcCCCc----EEEEEeechHH-------H-----HHhcCCCcceeeeEEEEECC
Q psy4395 223 MSDFEVGCPLGTGKFGHVYLAKEKTTQI----MIALKVLYKVE-------I-----INERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 223 ~~~~~~~~~lg~g~fg~v~~~~~~~~~~----~~A~K~i~~~~-------~-----~~~~~~h~~iv~l~~~~~~~ 282 (283)
..+|...+.+|.|+||.||++....++. .+|+|.+.... + ....++||||+++++++..+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~ 81 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP 81 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC
Confidence 4578888999999999999999887775 47888876431 1 12368999999999987653
No 336
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=97.03 E-value=0.00059 Score=57.12 Aligned_cols=59 Identities=25% Similarity=0.441 Sum_probs=48.8
Q ss_pred cCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHHH------H-----HhcCCCcceeeeEEEEECC
Q psy4395 223 MSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI------I-----NERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 223 ~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~------~-----~~~~~h~~iv~l~~~~~~~ 282 (283)
..+|.+.+.+|.|+||.||++..+. +..+|+|.+.+... . ...++||||+++++++.++
T Consensus 5 ~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 74 (261)
T cd05148 5 REEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVG 74 (261)
T ss_pred HHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecC
Confidence 3578889999999999999999987 88999999875432 1 2378999999999988765
No 337
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=97.02 E-value=0.00081 Score=55.96 Aligned_cols=50 Identities=20% Similarity=0.391 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCChhHHhhhhcceEEecCC
Q psy4395 124 ANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSSAWKSKFVRSLVSLAAP 179 (283)
Q Consensus 124 ~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~~~~~~~~v~~~i~i~~p 179 (283)
++++-.|++-... ...+-.++||||||++++..+..+|+. +..++++++.
T Consensus 122 ~~lkP~Ie~~y~~-~~~~~~i~GhSlGGLfvl~aLL~~p~~-----F~~y~~~SPS 171 (264)
T COG2819 122 EQLKPFIEARYRT-NSERTAIIGHSLGGLFVLFALLTYPDC-----FGRYGLISPS 171 (264)
T ss_pred HhhHHHHhccccc-CcccceeeeecchhHHHHHHHhcCcch-----hceeeeecch
Confidence 3455555553332 234689999999999999999999987 7888877654
No 338
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=97.02 E-value=0.0012 Score=56.13 Aligned_cols=60 Identities=18% Similarity=0.191 Sum_probs=46.1
Q ss_pred ccCceeeeeeecccCCeeEEEEEEcCCCc----EEEEEeechH-------HHHH-----hcCCCcceeeeEEEEEC
Q psy4395 222 QMSDFEVGCPLGTGKFGHVYLAKEKTTQI----MIALKVLYKV-------EIIN-----ERMTHQGMILAFTCYRN 281 (283)
Q Consensus 222 ~~~~~~~~~~lg~g~fg~v~~~~~~~~~~----~~A~K~i~~~-------~~~~-----~~~~h~~iv~l~~~~~~ 281 (283)
...+|.+.+.+|.|+||.||++....++. .+++|.+... .+.. .+++||||+++++++..
T Consensus 5 ~~~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~ 80 (279)
T cd05111 5 KETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG 80 (279)
T ss_pred CHhhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC
Confidence 34688889999999999999999987776 4777887532 1111 36789999999998754
No 339
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=97.01 E-value=0.00076 Score=56.43 Aligned_cols=58 Identities=24% Similarity=0.434 Sum_probs=45.9
Q ss_pred CceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechH-----HHH-----HhcCCCcceeeeEEEEECC
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKV-----EII-----NERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~-----~~~-----~~~~~h~~iv~l~~~~~~~ 282 (283)
.+|.+.+.+|.|+||.|+++..+ ++..+|+|.+.+. .+. ...++||||+++++++++.
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 71 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQ 71 (256)
T ss_pred HHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEEEEEEEEcCC
Confidence 46888899999999999999876 4668999998653 121 2368999999999988754
No 340
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=97.01 E-value=0.00051 Score=60.32 Aligned_cols=59 Identities=24% Similarity=0.424 Sum_probs=44.3
Q ss_pred CceeeeeeecccCCeeEEEEEEcC-----CCcEEEEEeechH-------HHHH-----hcC-CCcceeeeEEEEECC
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKT-----TQIMIALKVLYKV-------EIIN-----ERM-THQGMILAFTCYRNP 282 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~A~K~i~~~-------~~~~-----~~~-~h~~iv~l~~~~~~~ 282 (283)
+.|.+.+.+|.|+||.||++.... +++.||+|.+... .+.. .++ +||||+++++++.++
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~ 83 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKP 83 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecC
Confidence 478889999999999999997543 4578999998531 1111 245 899999999987643
No 341
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=97.01 E-value=0.0013 Score=56.11 Aligned_cols=60 Identities=22% Similarity=0.329 Sum_probs=46.9
Q ss_pred cCceeeeeeecccCCeeEEEEEEcCCC----------------cEEEEEeechHH-------HH-----HhcCCCcceee
Q psy4395 223 MSDFEVGCPLGTGKFGHVYLAKEKTTQ----------------IMIALKVLYKVE-------II-----NERMTHQGMIL 274 (283)
Q Consensus 223 ~~~~~~~~~lg~g~fg~v~~~~~~~~~----------------~~~A~K~i~~~~-------~~-----~~~~~h~~iv~ 274 (283)
..+|.+.+.+|.|+||.|+++....++ ..+|+|.+.... +. ...++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 457889999999999999998876544 458999987531 11 13689999999
Q ss_pred eEEEEECC
Q psy4395 275 AFTCYRNP 282 (283)
Q Consensus 275 l~~~~~~~ 282 (283)
+++++.++
T Consensus 84 ~~~~~~~~ 91 (296)
T cd05051 84 LLGVCTVD 91 (296)
T ss_pred EEEEEecC
Confidence 99988764
No 342
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=97.00 E-value=0.0013 Score=55.11 Aligned_cols=59 Identities=19% Similarity=0.321 Sum_probs=46.8
Q ss_pred cCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH-----HHH-----hcCCCcceeeeEEEEECC
Q psy4395 223 MSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE-----IIN-----ERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 223 ~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~-----~~~-----~~~~h~~iv~l~~~~~~~ 282 (283)
..+|.+.+.+|.|++|.||++... ++..||+|.+.... +.. .+++||||+++++++...
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 73 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLE 73 (261)
T ss_pred hhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCcccHHHHHHHHHHHHHCCCCCccceeEEEecC
Confidence 457899999999999999999865 45679999987532 222 368999999999988764
No 343
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=97.00 E-value=0.00097 Score=56.07 Aligned_cols=58 Identities=19% Similarity=0.416 Sum_probs=45.5
Q ss_pred cCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH-----HHH-----hcCCCcceeeeEEEEEC
Q psy4395 223 MSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE-----IIN-----ERMTHQGMILAFTCYRN 281 (283)
Q Consensus 223 ~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~-----~~~-----~~~~h~~iv~l~~~~~~ 281 (283)
..+|.+.+.+|.|+||.||++....+ ..+|+|.+.+.. +.. ..++||||+++++.+++
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~ 72 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 72 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCccCHHHHHHHHHHHHhCCCCCcceEEEEECC
Confidence 35689999999999999999987655 459999997522 222 36889999999988754
No 344
>KOG0983|consensus
Probab=96.99 E-value=0.00084 Score=55.97 Aligned_cols=65 Identities=22% Similarity=0.360 Sum_probs=52.6
Q ss_pred ccccccCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH-------HHH------hcCCCcceeeeEEEEECC
Q psy4395 218 SYRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE-------IIN------ERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 218 ~~~~~~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~-------~~~------~~~~h~~iv~l~~~~~~~ 282 (283)
++.....+......+|.|+.|.|..++.+++|...|+|.+.+.. +.. ..-+.|+||+.|++|-++
T Consensus 86 r~~~dindl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n 163 (391)
T KOG0983|consen 86 RYQADINDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITN 163 (391)
T ss_pred ccccChHHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeC
Confidence 44456678888899999999999999999999999999997642 211 244589999999999765
No 345
>PLN02310 triacylglycerol lipase
Probab=96.96 E-value=0.00077 Score=59.71 Aligned_cols=59 Identities=19% Similarity=0.339 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHc----CCCCEEEEEeCcccHHHHHHHHcCChhHHhhhhcceEEecCCCCcch
Q psy4395 125 NFKALIEETYDLN----GGTPVVLVAHSMGSLMCLYFLQRQSSAWKSKFVRSLVSLAAPWGGSV 184 (283)
Q Consensus 125 ~l~~~i~~~~~~~----~~~~v~lvgHSmGg~va~~~~~~~~~~~~~~~v~~~i~i~~p~~g~~ 184 (283)
++.+.|..+.+.+ +..++++.||||||.+|..++...........| .+++.++|-.|..
T Consensus 190 qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl~~~~~~~~v-~vyTFGsPRVGN~ 252 (405)
T PLN02310 190 QVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEAATTIPDLFV-SVISFGAPRVGNI 252 (405)
T ss_pred HHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHHHHhCcCcce-eEEEecCCCcccH
Confidence 3444444444433 234799999999999998776542111001113 4788899988864
No 346
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=96.96 E-value=0.0023 Score=55.53 Aligned_cols=58 Identities=31% Similarity=0.501 Sum_probs=47.3
Q ss_pred ceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechH---------HHHH-----hcCCCcceeeeEEEEECC
Q psy4395 225 DFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKV---------EIIN-----ERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 225 ~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~---------~~~~-----~~~~h~~iv~l~~~~~~~ 282 (283)
.|...+.+|.|+||.|+++....++..+|+|.+... .+.. ..++|||++++++++.++
T Consensus 26 ~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 97 (317)
T cd06635 26 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLRE 97 (317)
T ss_pred hhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeC
Confidence 466778899999999999999999999999998632 1211 367999999999998765
No 347
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=96.96 E-value=0.0011 Score=53.78 Aligned_cols=85 Identities=18% Similarity=0.133 Sum_probs=58.1
Q ss_pred HHHHHHHHh-CCc-ccCCCcCcCCCCCCCCCCcchHHHHHHHHHHHHHHHH-----cCCCCEEEEEeCcccHHHHHHHHc
Q psy4395 88 SYIAAALVG-LGY-QRDLSMRGAPYDFRKAPNENQEYFANFKALIEETYDL-----NGGTPVVLVAHSMGSLMCLYFLQR 160 (283)
Q Consensus 88 ~~l~~~L~~-~g~-~~~~d~~g~g~~~r~~~~~~~~~~~~l~~~i~~~~~~-----~~~~~v~lvgHSmGg~va~~~~~~ 160 (283)
..++..|+. .|+ ++.+|+|=.+. ......++|+.+.++.+.++ ....+|+|+|+|-||.+++.++..
T Consensus 18 ~~~~~~la~~~g~~v~~~~Yrl~p~------~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SAGg~la~~~~~~ 91 (211)
T PF07859_consen 18 WPFAARLAAERGFVVVSIDYRLAPE------APFPAALEDVKAAYRWLLKNADKLGIDPERIVLIGDSAGGHLALSLALR 91 (211)
T ss_dssp HHHHHHHHHHHTSEEEEEE---TTT------SSTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHhhccEEEEEeecccccc------ccccccccccccceeeeccccccccccccceEEeecccccchhhhhhhh
Confidence 456666664 899 77777765431 24567778888888888775 445589999999999999998875
Q ss_pred CChhHHhhhhcceEEecCC
Q psy4395 161 QSSAWKSKFVRSLVSLAAP 179 (283)
Q Consensus 161 ~~~~~~~~~v~~~i~i~~p 179 (283)
..+.- ...+++++++++.
T Consensus 92 ~~~~~-~~~~~~~~~~~p~ 109 (211)
T PF07859_consen 92 ARDRG-LPKPKGIILISPW 109 (211)
T ss_dssp HHHTT-TCHESEEEEESCH
T ss_pred hhhhc-ccchhhhhccccc
Confidence 33221 1128888888764
No 348
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=96.96 E-value=0.0015 Score=55.27 Aligned_cols=60 Identities=20% Similarity=0.348 Sum_probs=48.0
Q ss_pred cCceeeeeeecccCCeeEEEEEEcC-----CCcEEEEEeechH-------HHHH-----hcCCCcceeeeEEEEECC
Q psy4395 223 MSDFEVGCPLGTGKFGHVYLAKEKT-----TQIMIALKVLYKV-------EIIN-----ERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 223 ~~~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~A~K~i~~~-------~~~~-----~~~~h~~iv~l~~~~~~~ 282 (283)
...|.+.+.+|.|++|.||.+..+. ++..||+|.+... .+.. ..++||||+++++++.+.
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 81 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFER 81 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccC
Confidence 3568889999999999999999987 7788999988632 1222 368999999999987654
No 349
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=96.95 E-value=0.00071 Score=56.75 Aligned_cols=58 Identities=21% Similarity=0.257 Sum_probs=47.4
Q ss_pred ceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH-------HHH-----hcCCCcceeeeEEEEECC
Q psy4395 225 DFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE-------IIN-----ERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 225 ~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~-------~~~-----~~~~h~~iv~l~~~~~~~ 282 (283)
+|...+.+|.|++|.|+++..+.+++.+|+|.+.+.. +.+ ..++||||+++++++.++
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~ 71 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNN 71 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecC
Confidence 5677788999999999999999999999999886531 111 257899999999888764
No 350
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=96.95 E-value=0.0014 Score=55.72 Aligned_cols=57 Identities=28% Similarity=0.445 Sum_probs=46.4
Q ss_pred eeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH------H-----HHhcCCCcceeeeEEEEECC
Q psy4395 226 FEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE------I-----INERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 226 ~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~------~-----~~~~~~h~~iv~l~~~~~~~ 282 (283)
|.+.+.+|.|+||.|++++...++..+++|.+.... . ....++||||+++++++..+
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~ 74 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYE 74 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeC
Confidence 466788999999999999999999999999986421 1 12268999999999988764
No 351
>KOG0192|consensus
Probab=96.95 E-value=0.0009 Score=59.15 Aligned_cols=58 Identities=22% Similarity=0.466 Sum_probs=44.2
Q ss_pred cCceeeeeeecccCCeeEEEEEEcCCCcE-EEEEeechHH--------HHH-----hcCCCcceeeeEEEEECC
Q psy4395 223 MSDFEVGCPLGTGKFGHVYLAKEKTTQIM-IALKVLYKVE--------IIN-----ERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 223 ~~~~~~~~~lg~g~fg~v~~~~~~~~~~~-~A~K~i~~~~--------~~~-----~~~~h~~iv~l~~~~~~~ 282 (283)
..++.....+|.|+||+||.+..+ |+. +|+|++.... +.+ .+++|||||+++++...+
T Consensus 40 ~~~l~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~ 111 (362)
T KOG0192|consen 40 PDELPIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSP 111 (362)
T ss_pred hHHhhhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence 345566667999999999988775 444 9999998642 222 369999999999988765
No 352
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=96.92 E-value=0.0021 Score=53.60 Aligned_cols=59 Identities=19% Similarity=0.387 Sum_probs=47.5
Q ss_pred ccCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHHH----------HHhcCCCcceeeeEEEEECC
Q psy4395 222 QMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI----------INERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 222 ~~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~----------~~~~~~h~~iv~l~~~~~~~ 282 (283)
...+|.+...+|.|++|.||.+... ++.+|+|.+..... ...+++|+||+++++++.+.
T Consensus 4 ~~~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 72 (256)
T cd05039 4 NSKELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLLGVVLQG 72 (256)
T ss_pred ChhhccceeeeecCCCceEEEEEec--CcEEEEEEeccchhHHHHHHHHHHHHHhcCCcceeeeEEEEcCC
Confidence 3467888999999999999999764 78899999976532 12378999999999988754
No 353
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=96.91 E-value=0.0021 Score=54.07 Aligned_cols=59 Identities=20% Similarity=0.240 Sum_probs=46.7
Q ss_pred CceeeeeeecccCCeeEEEEEEcCCCc---EEEEEeechHH-------HH-----HhcCCCcceeeeEEEEECC
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKTTQI---MIALKVLYKVE-------II-----NERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~~~~---~~A~K~i~~~~-------~~-----~~~~~h~~iv~l~~~~~~~ 282 (283)
.+|...+.+|.|+||.||++..+.++. .+|+|.+.... +. ...++||||+++++++++.
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 78 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKF 78 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccC
Confidence 467788999999999999999886654 79999986431 11 2367999999999998765
No 354
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=96.90 E-value=0.00052 Score=58.15 Aligned_cols=58 Identities=22% Similarity=0.327 Sum_probs=46.5
Q ss_pred ceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH-------HHH-----hcCCCcceeeeEEEEECC
Q psy4395 225 DFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE-------IIN-----ERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 225 ~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~-------~~~-----~~~~h~~iv~l~~~~~~~ 282 (283)
.|...+.+|.|.||.||.+....++..+|+|.+.... +.. .+++||||++++++|.++
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 74 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKG 74 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccC
Confidence 3555677899999999999999999999999987321 222 268999999999988765
No 355
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=96.90 E-value=0.003 Score=54.65 Aligned_cols=57 Identities=30% Similarity=0.495 Sum_probs=45.9
Q ss_pred eeeeeeecccCCeeEEEEEEcCCCcEEEEEeechH---------HHHH-----hcCCCcceeeeEEEEECC
Q psy4395 226 FEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKV---------EIIN-----ERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 226 ~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~---------~~~~-----~~~~h~~iv~l~~~~~~~ 282 (283)
|.....+|.|+||.||++....++..|++|.+... .+.. ..++|||++++++++++.
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 93 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKE 93 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeC
Confidence 44456799999999999999999999999998631 1222 368999999999998875
No 356
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=96.89 E-value=0.003 Score=52.05 Aligned_cols=93 Identities=17% Similarity=0.199 Sum_probs=53.8
Q ss_pred hHHHHHHHHHhCCc-ccCCCcCcCCCCCCCCCCcchHHHHHHHHHHHHHHHHcC----CCCEEEEEeCcccHHHHHHHHc
Q psy4395 86 YFSYIAAALVGLGY-QRDLSMRGAPYDFRKAPNENQEYFANFKALIEETYDLNG----GTPVVLVAHSMGSLMCLYFLQR 160 (283)
Q Consensus 86 ~~~~l~~~L~~~g~-~~~~d~~g~g~~~r~~~~~~~~~~~~l~~~i~~~~~~~~----~~~v~lvgHSmGg~va~~~~~~ 160 (283)
.|+.+.+.|++.|| +++.-+ -.+.|-. .......+.....++.+....+ ..|++-||||||+.+-+.....
T Consensus 35 tYr~lLe~La~~Gy~ViAtPy-~~tfDH~---~~A~~~~~~f~~~~~~L~~~~~~~~~~lP~~~vGHSlGcklhlLi~s~ 110 (250)
T PF07082_consen 35 TYRYLLERLADRGYAVIATPY-VVTFDHQ---AIAREVWERFERCLRALQKRGGLDPAYLPVYGVGHSLGCKLHLLIGSL 110 (250)
T ss_pred HHHHHHHHHHhCCcEEEEEec-CCCCcHH---HHHHHHHHHHHHHHHHHHHhcCCCcccCCeeeeecccchHHHHHHhhh
Confidence 58899999999999 666421 1222200 0112222333344444443321 2488999999999988877666
Q ss_pred CChhHHhhhhcceEEecCCCCcchhhH
Q psy4395 161 QSSAWKSKFVRSLVSLAAPWGGSVKAV 187 (283)
Q Consensus 161 ~~~~~~~~~v~~~i~i~~p~~g~~~~~ 187 (283)
++.. -++-|+++--..++..++
T Consensus 111 ~~~~-----r~gniliSFNN~~a~~aI 132 (250)
T PF07082_consen 111 FDVE-----RAGNILISFNNFPADEAI 132 (250)
T ss_pred ccCc-----ccceEEEecCChHHHhhC
Confidence 5543 356677765544544443
No 357
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=96.89 E-value=0.0032 Score=54.93 Aligned_cols=57 Identities=25% Similarity=0.383 Sum_probs=41.6
Q ss_pred CCCCEEEEEeCcccHHHHHHHHcCChhHHhhhhcceEEecCCCCcchhh---HHHHhhhc
Q psy4395 138 GGTPVVLVAHSMGSLMCLYFLQRQSSAWKSKFVRSLVSLAAPWGGSVKA---VKVFAVEN 194 (283)
Q Consensus 138 ~~~~v~lvgHSmGg~va~~~~~~~~~~~~~~~v~~~i~i~~p~~g~~~~---~~~~~~g~ 194 (283)
+.+||.|||||||+-+..+.+....++-...-|+.++++++|....... .+...+|.
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~~~~~W~~~r~vVsGr 277 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPSDPEEWRKIRSVVSGR 277 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCCCHHHHHHHHHHccCe
Confidence 6779999999999999988877654432223379999999998776544 34455554
No 358
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=96.88 E-value=0.0019 Score=53.87 Aligned_cols=58 Identities=19% Similarity=0.382 Sum_probs=46.4
Q ss_pred CceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechH-----HHH-----HhcCCCcceeeeEEEEECC
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKV-----EII-----NERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~-----~~~-----~~~~~h~~iv~l~~~~~~~ 282 (283)
.+|.+.+.+|.|+||.||++... .+..+|+|.+.+. .+. ...++||+|+++++++++.
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 71 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCTER 71 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCCCHHHHHHHHHHHHhCCCCCeeeEEEEEccC
Confidence 47888999999999999999875 4678999988753 122 2368999999999998764
No 359
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=96.88 E-value=0.0018 Score=54.58 Aligned_cols=57 Identities=25% Similarity=0.440 Sum_probs=45.8
Q ss_pred ceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechH-----HHHH-----hcC-CCcceeeeEEEEEC
Q psy4395 225 DFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKV-----EIIN-----ERM-THQGMILAFTCYRN 281 (283)
Q Consensus 225 ~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~-----~~~~-----~~~-~h~~iv~l~~~~~~ 281 (283)
.|.+.+.+|.|+||.||.+..+.+++.+|+|.+... .+.. ..+ +||||++++++|.+
T Consensus 7 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 74 (272)
T cd06637 7 IFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIK 74 (272)
T ss_pred hhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEee
Confidence 466778899999999999999999999999998642 1211 134 79999999998865
No 360
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=96.87 E-value=0.0018 Score=54.78 Aligned_cols=60 Identities=17% Similarity=0.310 Sum_probs=46.1
Q ss_pred cCceeeeeeecccCCeeEEEEEEc-----CCCcEEEEEeechHH-------H-----HHhcCCCcceeeeEEEEECC
Q psy4395 223 MSDFEVGCPLGTGKFGHVYLAKEK-----TTQIMIALKVLYKVE-------I-----INERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 223 ~~~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~A~K~i~~~~-------~-----~~~~~~h~~iv~l~~~~~~~ 282 (283)
.++|.+.+.+|.|+||.||.+..+ .++..+|+|.+.+.. + ....++||||+++++++.+.
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~ 81 (277)
T cd05062 5 REKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG 81 (277)
T ss_pred HHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence 357889999999999999998864 245679999886421 1 12368999999999988754
No 361
>KOG1187|consensus
Probab=96.87 E-value=0.0018 Score=57.46 Aligned_cols=57 Identities=25% Similarity=0.425 Sum_probs=43.8
Q ss_pred CceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH------HHHh-----cCCCcceeeeEEEEEC
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE------IINE-----RMTHQGMILAFTCYRN 281 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~------~~~~-----~~~h~~iv~l~~~~~~ 281 (283)
++|.-...+|.|+||.||.+..... ..+|+|.+.... +..+ +++|||+|+|+++..+
T Consensus 75 ~~Fs~~~~ig~Ggfg~VYkG~l~~~-~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e 142 (361)
T KOG1187|consen 75 NNFSESNLIGEGGFGTVYKGVLSDG-TVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYCLE 142 (361)
T ss_pred hCCchhcceecCCCeEEEEEEECCC-CEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEEec
Confidence 3566667899999999999877644 899999886522 3222 7899999999997654
No 362
>PRK09188 serine/threonine protein kinase; Provisional
Probab=96.86 E-value=0.0037 Score=55.38 Aligned_cols=53 Identities=11% Similarity=-0.013 Sum_probs=41.4
Q ss_pred ccCceeeeeeecccCCeeEEEEEEcC-CCcEEEEEeechH-----------HHHH-----hcCCCcceee
Q psy4395 222 QMSDFEVGCPLGTGKFGHVYLAKEKT-TQIMIALKVLYKV-----------EIIN-----ERMTHQGMIL 274 (283)
Q Consensus 222 ~~~~~~~~~~lg~g~fg~v~~~~~~~-~~~~~A~K~i~~~-----------~~~~-----~~~~h~~iv~ 274 (283)
-...|.+.+.+|+|+||.||++.++. +++.+|+|.+... .+.+ ..++|+|||.
T Consensus 16 ~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~ 85 (365)
T PRK09188 16 LSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVP 85 (365)
T ss_pred ccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCc
Confidence 45679999999999999999999886 6788899986421 1222 2688999984
No 363
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=96.86 E-value=0.00098 Score=55.77 Aligned_cols=47 Identities=19% Similarity=0.275 Sum_probs=35.8
Q ss_pred HHHHHHHHHcCCC--CEEEEEeCcccHHHHHHHHcCChhHHhhhhcceEEecCC
Q psy4395 128 ALIEETYDLNGGT--PVVLVAHSMGSLMCLYFLQRQSSAWKSKFVRSLVSLAAP 179 (283)
Q Consensus 128 ~~i~~~~~~~~~~--~v~lvgHSmGg~va~~~~~~~~~~~~~~~v~~~i~i~~p 179 (283)
+++..+.++++.. +..|.||||||..|+.++..+|+. ..+++++++.
T Consensus 101 el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~-----F~~~~~~S~~ 149 (251)
T PF00756_consen 101 ELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDL-----FGAVIAFSGA 149 (251)
T ss_dssp HHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTT-----ESEEEEESEE
T ss_pred cchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccc-----cccccccCcc
Confidence 4444445544321 279999999999999999999997 8899988753
No 364
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=96.86 E-value=0.0022 Score=54.39 Aligned_cols=57 Identities=25% Similarity=0.419 Sum_probs=46.1
Q ss_pred CceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH-----HHH-----hcC-CCcceeeeEEEEE
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE-----IIN-----ERM-THQGMILAFTCYR 280 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~-----~~~-----~~~-~h~~iv~l~~~~~ 280 (283)
..|.+.+.+|.|+||.||++..+.+++.+|+|++.... +.. .++ +||||++++++|.
T Consensus 16 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~ 83 (282)
T cd06636 16 GIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFI 83 (282)
T ss_pred hhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehh
Confidence 46777889999999999999999999999999986432 111 133 7999999999874
No 365
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=96.85 E-value=0.0013 Score=62.71 Aligned_cols=87 Identities=17% Similarity=0.166 Sum_probs=60.2
Q ss_pred chHHHHHHHHHhCCc-ccCCCcCcC---CCCCCCCCC--cchHHHHHHHHHHHHHHHHcCC---CCEEEEEeCcccHHHH
Q psy4395 85 SYFSYIAAALVGLGY-QRDLSMRGA---PYDFRKAPN--ENQEYFANFKALIEETYDLNGG---TPVVLVAHSMGSLMCL 155 (283)
Q Consensus 85 ~~~~~l~~~L~~~g~-~~~~d~~g~---g~~~r~~~~--~~~~~~~~l~~~i~~~~~~~~~---~~v~lvgHSmGg~va~ 155 (283)
..|....+.|+.+|| |+.+|.||- |.+|+.... -.....+|+.+.++.+ ++.+. .++.|.|||.||.+++
T Consensus 410 ~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~~~~~~~g~~~~~D~~~~~~~l-~~~~~~d~~ri~i~G~SyGGymtl 488 (620)
T COG1506 410 YSFNPEIQVLASAGYAVLAPNYRGSTGYGREFADAIRGDWGGVDLEDLIAAVDAL-VKLPLVDPERIGITGGSYGGYMTL 488 (620)
T ss_pred cccchhhHHHhcCCeEEEEeCCCCCCccHHHHHHhhhhccCCccHHHHHHHHHHH-HhCCCcChHHeEEeccChHHHHHH
Confidence 346688899999999 899999974 334433221 1233457777777743 33332 3799999999999999
Q ss_pred HHHHcCChhHHhhhhcceEEecC
Q psy4395 156 YFLQRQSSAWKSKFVRSLVSLAA 178 (283)
Q Consensus 156 ~~~~~~~~~~~~~~v~~~i~i~~ 178 (283)
..+...| . .++.++..+
T Consensus 489 ~~~~~~~-~-----f~a~~~~~~ 505 (620)
T COG1506 489 LAATKTP-R-----FKAAVAVAG 505 (620)
T ss_pred HHHhcCc-h-----hheEEeccC
Confidence 9999888 4 455555543
No 366
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=96.84 E-value=0.0018 Score=55.44 Aligned_cols=59 Identities=20% Similarity=0.401 Sum_probs=45.3
Q ss_pred CceeeeeeecccCCeeEEEEEEcCC--------------CcEEEEEeechH-------HHH-----HhcCCCcceeeeEE
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKTT--------------QIMIALKVLYKV-------EII-----NERMTHQGMILAFT 277 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~~--------------~~~~A~K~i~~~-------~~~-----~~~~~h~~iv~l~~ 277 (283)
.+|.+.+.+|+|+||.||+++...+ ...||+|.+... .+. ..+++||||+++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 5788899999999999999887543 235899998753 111 13689999999999
Q ss_pred EEECC
Q psy4395 278 CYRNP 282 (283)
Q Consensus 278 ~~~~~ 282 (283)
++.++
T Consensus 85 ~~~~~ 89 (295)
T cd05097 85 VCVSD 89 (295)
T ss_pred EEcCC
Confidence 88764
No 367
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=96.83 E-value=0.002 Score=55.50 Aligned_cols=62 Identities=19% Similarity=0.389 Sum_probs=46.9
Q ss_pred cccCceeeeeeecccCCeeEEEEEEc-----CCCcEEEEEeechHH-------HHH-----hcC-CCcceeeeEEEEECC
Q psy4395 221 WQMSDFEVGCPLGTGKFGHVYLAKEK-----TTQIMIALKVLYKVE-------IIN-----ERM-THQGMILAFTCYRNP 282 (283)
Q Consensus 221 ~~~~~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~A~K~i~~~~-------~~~-----~~~-~h~~iv~l~~~~~~~ 282 (283)
...++|.+.+.+|.|+||.|+++... .++..+|+|.+.+.. +.. .++ +||||+++++++++.
T Consensus 32 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 111 (302)
T cd05055 32 FPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIG 111 (302)
T ss_pred ccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecC
Confidence 34568999999999999999999753 345679999886421 211 256 799999999998764
No 368
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=96.82 E-value=0.0024 Score=54.96 Aligned_cols=64 Identities=22% Similarity=0.481 Sum_probs=48.1
Q ss_pred cccccCceeeeeeecccCCeeEEEEEEc-------CCCcEEEEEeechHH-------HHH-----hcC-CCcceeeeEEE
Q psy4395 219 YRWQMSDFEVGCPLGTGKFGHVYLAKEK-------TTQIMIALKVLYKVE-------IIN-----ERM-THQGMILAFTC 278 (283)
Q Consensus 219 ~~~~~~~~~~~~~lg~g~fg~v~~~~~~-------~~~~~~A~K~i~~~~-------~~~-----~~~-~h~~iv~l~~~ 278 (283)
..+...+|.+.+.+|.|+||.||+++.. ..+..+|+|.+.... +.+ ..+ +||||++++++
T Consensus 10 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~ 89 (304)
T cd05101 10 WEFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGA 89 (304)
T ss_pred ccccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEE
Confidence 4456678999999999999999999752 234579999986421 111 145 79999999999
Q ss_pred EECC
Q psy4395 279 YRNP 282 (283)
Q Consensus 279 ~~~~ 282 (283)
++++
T Consensus 90 ~~~~ 93 (304)
T cd05101 90 CTQD 93 (304)
T ss_pred EecC
Confidence 8765
No 369
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=96.81 E-value=0.0017 Score=55.61 Aligned_cols=59 Identities=20% Similarity=0.421 Sum_probs=45.3
Q ss_pred CceeeeeeecccCCeeEEEEEEcC----------------CCcEEEEEeechH-------HHHH-----hcCCCcceeee
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKT----------------TQIMIALKVLYKV-------EIIN-----ERMTHQGMILA 275 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~----------------~~~~~A~K~i~~~-------~~~~-----~~~~h~~iv~l 275 (283)
.+|.+.+.+|.|+||.||+++... ++..+|+|.+... .+.. .+++||||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 468899999999999999986432 3457999999742 1212 37899999999
Q ss_pred EEEEECC
Q psy4395 276 FTCYRNP 282 (283)
Q Consensus 276 ~~~~~~~ 282 (283)
++++.++
T Consensus 85 ~~~~~~~ 91 (296)
T cd05095 85 LAVCITS 91 (296)
T ss_pred EEEEecC
Confidence 9998765
No 370
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=96.80 E-value=0.0029 Score=54.50 Aligned_cols=62 Identities=26% Similarity=0.400 Sum_probs=46.7
Q ss_pred cccCceeeeeeecccCCeeEEEEEEcC-------CCcEEEEEeechHH-------HHHh-----cC-CCcceeeeEEEEE
Q psy4395 221 WQMSDFEVGCPLGTGKFGHVYLAKEKT-------TQIMIALKVLYKVE-------IINE-----RM-THQGMILAFTCYR 280 (283)
Q Consensus 221 ~~~~~~~~~~~lg~g~fg~v~~~~~~~-------~~~~~A~K~i~~~~-------~~~~-----~~-~h~~iv~l~~~~~ 280 (283)
...++|.+.+.+|+|+||.|++++... +...+|+|.+.... +..+ ++ +||||+++++++.
T Consensus 15 ~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (307)
T cd05098 15 VPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT 94 (307)
T ss_pred eehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEe
Confidence 344789999999999999999998643 33579999997421 1111 45 7999999999887
Q ss_pred CC
Q psy4395 281 NP 282 (283)
Q Consensus 281 ~~ 282 (283)
+.
T Consensus 95 ~~ 96 (307)
T cd05098 95 QD 96 (307)
T ss_pred cC
Confidence 64
No 371
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=96.79 E-value=0.0024 Score=54.13 Aligned_cols=59 Identities=24% Similarity=0.284 Sum_probs=46.6
Q ss_pred cCceeeeeeecccCCeeEEEEEEcCCCc----EEEEEeechHH-------HH-----HhcCCCcceeeeEEEEEC
Q psy4395 223 MSDFEVGCPLGTGKFGHVYLAKEKTTQI----MIALKVLYKVE-------II-----NERMTHQGMILAFTCYRN 281 (283)
Q Consensus 223 ~~~~~~~~~lg~g~fg~v~~~~~~~~~~----~~A~K~i~~~~-------~~-----~~~~~h~~iv~l~~~~~~ 281 (283)
..+|.+.+.+|.|+||.||++..+.++. .+|+|.+.+.. +. ..+++||||+++++++.+
T Consensus 6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 80 (279)
T cd05057 6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS 80 (279)
T ss_pred HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec
Confidence 4678889999999999999999887664 58999886431 11 236899999999998764
No 372
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=96.79 E-value=0.0034 Score=52.56 Aligned_cols=59 Identities=17% Similarity=0.367 Sum_probs=46.2
Q ss_pred ccCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH-----H-----HHhcCCCcceeeeEEEEEC
Q psy4395 222 QMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE-----I-----INERMTHQGMILAFTCYRN 281 (283)
Q Consensus 222 ~~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~-----~-----~~~~~~h~~iv~l~~~~~~ 281 (283)
...++.+.+.+|.|+||.||++... .+..+|+|.+.... + ...+++|+||+++++++.+
T Consensus 4 ~~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~ 72 (260)
T cd05073 4 PRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK 72 (260)
T ss_pred cccceeEEeEecCccceEEEEEEec-CCccEEEEecCCChhHHHHHHHHHHHHHhcCCCCcceEEEEEcC
Confidence 4568999999999999999999754 55669999886422 1 1236899999999998765
No 373
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=96.79 E-value=0.0037 Score=52.88 Aligned_cols=58 Identities=21% Similarity=0.271 Sum_probs=45.7
Q ss_pred CceeeeeeecccCCeeEEEEEEc----CCCcEEEEEeechHH-------HH-----HhcCCCcceeeeEEEEEC
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEK----TTQIMIALKVLYKVE-------II-----NERMTHQGMILAFTCYRN 281 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~----~~~~~~A~K~i~~~~-------~~-----~~~~~h~~iv~l~~~~~~ 281 (283)
.++.+.+.+|.|+||.|+++... .++..+|+|.+.... +. ...++||||++++++++.
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~ 77 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEK 77 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeec
Confidence 46777889999999999999865 347899999997432 11 136899999999998876
No 374
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=96.76 E-value=0.0032 Score=52.73 Aligned_cols=58 Identities=19% Similarity=0.386 Sum_probs=45.7
Q ss_pred cCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechH-----HH-----HHhcCCCcceeeeEEEEEC
Q psy4395 223 MSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKV-----EI-----INERMTHQGMILAFTCYRN 281 (283)
Q Consensus 223 ~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~-----~~-----~~~~~~h~~iv~l~~~~~~ 281 (283)
.++|.+.+.+|.|+||.|+++... .+..+|+|.+... .+ ...+++||+|++++++++.
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~ 72 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVSE 72 (260)
T ss_pred hHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCCCHHHHHHHHHHHHhcCCCceEEEEeEECC
Confidence 457888999999999999999765 5567999988742 22 2236899999999998754
No 375
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=96.76 E-value=0.003 Score=53.67 Aligned_cols=56 Identities=25% Similarity=0.282 Sum_probs=42.7
Q ss_pred eeeeeeecccCCeeEEEEEE----cCCCcEEEEEeechHH-------HH-----HhcCCCcceeeeEEEEEC
Q psy4395 226 FEVGCPLGTGKFGHVYLAKE----KTTQIMIALKVLYKVE-------II-----NERMTHQGMILAFTCYRN 281 (283)
Q Consensus 226 ~~~~~~lg~g~fg~v~~~~~----~~~~~~~A~K~i~~~~-------~~-----~~~~~h~~iv~l~~~~~~ 281 (283)
+.+.+.+|.|+||.|+++.. ..++..+|+|.+.... +. ..+++||||+++++++.+
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 77 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSE 77 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 36788999999999988653 3567899999987421 11 137899999999998764
No 376
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=96.75 E-value=0.0023 Score=54.47 Aligned_cols=58 Identities=22% Similarity=0.249 Sum_probs=45.3
Q ss_pred ceeeeeeecccCCeeEEEEEE----cCCCcEEEEEeechHH-------H-----HHhcCCCcceeeeEEEEECC
Q psy4395 225 DFEVGCPLGTGKFGHVYLAKE----KTTQIMIALKVLYKVE-------I-----INERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 225 ~~~~~~~lg~g~fg~v~~~~~----~~~~~~~A~K~i~~~~-------~-----~~~~~~h~~iv~l~~~~~~~ 282 (283)
.|.+.+.+|+|+||.|++++. +.++..||+|.+.... + ....++||||++++++++++
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 78 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTED 78 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecC
Confidence 467788999999999999974 4578899999986321 1 12368999999999988764
No 377
>KOG0614|consensus
Probab=96.74 E-value=8.1e-05 Score=66.74 Aligned_cols=64 Identities=27% Similarity=0.431 Sum_probs=53.9
Q ss_pred cccccCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHHHHH--------------hcCCCcceeeeEEEEECC
Q psy4395 219 YRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEIIN--------------ERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 219 ~~~~~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~~~--------------~~~~h~~iv~l~~~~~~~ 282 (283)
....++++..+..+|-|+||+|-+++.++....+|+|+++|.++.. ...+.|+||+||-.|.|+
T Consensus 415 a~v~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~ 492 (732)
T KOG0614|consen 415 AQVKLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDS 492 (732)
T ss_pred cccchhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccc
Confidence 3456778999999999999999999998877789999999876522 256799999999999875
No 378
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=96.73 E-value=0.001 Score=57.15 Aligned_cols=57 Identities=23% Similarity=0.343 Sum_probs=45.3
Q ss_pred eeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH------HH-----HhcCCCcceeeeEEEEECC
Q psy4395 226 FEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE------II-----NERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 226 ~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~------~~-----~~~~~h~~iv~l~~~~~~~ 282 (283)
|.....+|.|+||.|+.+..+.+++.||+|.+.... +. ...++||||++++++|+.+
T Consensus 23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~ 90 (297)
T cd06659 23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVG 90 (297)
T ss_pred HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeC
Confidence 444557899999999999999999999999986421 21 2367899999999988764
No 379
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=96.72 E-value=0.0022 Score=53.48 Aligned_cols=59 Identities=17% Similarity=0.314 Sum_probs=46.3
Q ss_pred ccCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH----HH-----HhcCCCcceeeeEEEEECC
Q psy4395 222 QMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE----II-----NERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 222 ~~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~----~~-----~~~~~h~~iv~l~~~~~~~ 282 (283)
+..+|.+.+.+|.|+||.|+.+. .++..+|+|.+.... +. ...++||||+++++++..+
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~--~~~~~~~iK~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~ 71 (254)
T cd05083 4 NLQKLTLGEIIGEGEFGAVLQGE--YTGQKVAVKNIKCDVTAQAFLEETAVMTKLHHKNLVRLLGVILHN 71 (254)
T ss_pred cHHHceeeeeeccCCCCceEecc--cCCCceEEEeecCcchHHHHHHHHHHHHhCCCCCcCeEEEEEcCC
Confidence 34678999999999999999875 477889999986431 11 2368999999999988654
No 380
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=96.72 E-value=0.0016 Score=57.17 Aligned_cols=59 Identities=22% Similarity=0.384 Sum_probs=47.7
Q ss_pred cCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechH--------HH-----HHhcCCCcceeeeEEEEEC
Q psy4395 223 MSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKV--------EI-----INERMTHQGMILAFTCYRN 281 (283)
Q Consensus 223 ~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~--------~~-----~~~~~~h~~iv~l~~~~~~ 281 (283)
.++|.+...+|.|.+|.||+++...+++.||+|++... .+ ....+.||||+++++++..
T Consensus 14 ~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 85 (343)
T cd07851 14 PDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTP 85 (343)
T ss_pred cCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhc
Confidence 35789999999999999999999999999999998642 11 1236789999998877654
No 381
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=96.69 E-value=0.0036 Score=53.67 Aligned_cols=59 Identities=25% Similarity=0.407 Sum_probs=44.9
Q ss_pred CceeeeeeecccCCeeEEEEEEcCCCc--EEEEEeechH-------HHHHh-----cC-CCcceeeeEEEEECC
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKTTQI--MIALKVLYKV-------EIINE-----RM-THQGMILAFTCYRNP 282 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~~~~--~~A~K~i~~~-------~~~~~-----~~-~h~~iv~l~~~~~~~ 282 (283)
++|.+.+.+|.|+||.|+++..+.++. .+++|.+... .+..+ ++ +||||+++++++++.
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 75 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENR 75 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccC
Confidence 478888999999999999999887764 4688877631 12221 45 799999999988754
No 382
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=96.69 E-value=0.0047 Score=52.52 Aligned_cols=59 Identities=24% Similarity=0.337 Sum_probs=48.5
Q ss_pred CceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH-----HHH-----hcCCCcceeeeEEEEECC
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE-----IIN-----ERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~-----~~~-----~~~~h~~iv~l~~~~~~~ 282 (283)
..|.....++.|.+|.||.+....++..+++|++.... +.. ..++|+||+++++++.++
T Consensus 19 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 87 (286)
T cd06614 19 ELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNIVDYYDSYLVG 87 (286)
T ss_pred ccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCCCCeeEEEEEEEEC
Confidence 45777789999999999999999899999999997432 222 267999999999998764
No 383
>PHA03210 serine/threonine kinase US3; Provisional
Probab=96.68 E-value=0.0017 Score=60.23 Aligned_cols=60 Identities=18% Similarity=0.346 Sum_probs=40.7
Q ss_pred cCceeeeeeecccCCeeEEEEEEcCCC-cEEEEE--------------eechH---------HH-----HHhcCCCccee
Q psy4395 223 MSDFEVGCPLGTGKFGHVYLAKEKTTQ-IMIALK--------------VLYKV---------EI-----INERMTHQGMI 273 (283)
Q Consensus 223 ~~~~~~~~~lg~g~fg~v~~~~~~~~~-~~~A~K--------------~i~~~---------~~-----~~~~~~h~~iv 273 (283)
..+|.+.+.||.|+||.||++..+... ...+.| .+.+. .+ ....++|||||
T Consensus 147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv 226 (501)
T PHA03210 147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENIL 226 (501)
T ss_pred hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcC
Confidence 467999999999999999998765432 222222 11110 01 12368999999
Q ss_pred eeEEEEECC
Q psy4395 274 LAFTCYRNP 282 (283)
Q Consensus 274 ~l~~~~~~~ 282 (283)
+++++++++
T Consensus 227 ~l~~~~~~~ 235 (501)
T PHA03210 227 KIEEILRSE 235 (501)
T ss_pred cEeEEEEEC
Confidence 999999875
No 384
>KOG1151|consensus
Probab=96.68 E-value=0.00037 Score=61.69 Aligned_cols=59 Identities=22% Similarity=0.334 Sum_probs=48.4
Q ss_pred CceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH-H-----------------HHhcCCCcceeeeEEEEECC
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE-I-----------------INERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~-~-----------------~~~~~~h~~iv~l~~~~~~~ 282 (283)
+.|.+...+|+|+|+.||.|-+....+.||+|+-...+ . +...|+||-||++|++|.-+
T Consensus 463 ~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslD 539 (775)
T KOG1151|consen 463 DRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLD 539 (775)
T ss_pred HHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeec
Confidence 45777889999999999999999999999999875432 1 22368999999999999754
No 385
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=96.67 E-value=0.022 Score=49.40 Aligned_cols=53 Identities=26% Similarity=0.448 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCChhHHhhhhcceEEecCCCC
Q psy4395 124 ANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSSAWKSKFVRSLVSLAAPWG 181 (283)
Q Consensus 124 ~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~~~~~~~~v~~~i~i~~p~~ 181 (283)
..+.+.+..+.. ++...++||||.+|+..+..++...+.. .++++|+|++.+.
T Consensus 178 ari~Aa~~~~~~-~~~~~ivlIg~G~gA~~~~~~la~~~~~----~~daLV~I~a~~p 230 (310)
T PF12048_consen 178 ARIEAAIAFAQQ-QGGKNIVLIGHGTGAGWAARYLAEKPPP----MPDALVLINAYWP 230 (310)
T ss_pred HHHHHHHHHHHh-cCCceEEEEEeChhHHHHHHHHhcCCCc----ccCeEEEEeCCCC
Confidence 344444444433 4555699999999999999988886653 2889999977543
No 386
>KOG0666|consensus
Probab=96.67 E-value=0.00014 Score=61.57 Aligned_cols=60 Identities=22% Similarity=0.339 Sum_probs=46.1
Q ss_pred ccCceeeeeeecccCCeeEEEEEEcCCCc----EEEEEeechHH-------------HHHhcCCCcceeeeEEEEEC
Q psy4395 222 QMSDFEVGCPLGTGKFGHVYLAKEKTTQI----MIALKVLYKVE-------------IINERMTHQGMILAFTCYRN 281 (283)
Q Consensus 222 ~~~~~~~~~~lg~g~fg~v~~~~~~~~~~----~~A~K~i~~~~-------------~~~~~~~h~~iv~l~~~~~~ 281 (283)
.+..|..+..+|+|.||.||+|..++++. .||+|.+..++ ...+.++|||+|+|-.+|-+
T Consensus 22 ~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~ 98 (438)
T KOG0666|consen 22 DLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLS 98 (438)
T ss_pred HHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhc
Confidence 35678899999999999999997665542 68999887541 23346899999998877654
No 387
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=96.66 E-value=0.0042 Score=53.01 Aligned_cols=62 Identities=23% Similarity=0.392 Sum_probs=46.9
Q ss_pred cccCceeeeeeecccCCeeEEEEEEcCC-----CcEEEEEeechHH-------HHH-----hcC-CCcceeeeEEEEECC
Q psy4395 221 WQMSDFEVGCPLGTGKFGHVYLAKEKTT-----QIMIALKVLYKVE-------IIN-----ERM-THQGMILAFTCYRNP 282 (283)
Q Consensus 221 ~~~~~~~~~~~lg~g~fg~v~~~~~~~~-----~~~~A~K~i~~~~-------~~~-----~~~-~h~~iv~l~~~~~~~ 282 (283)
....+|.+.+.+|.|+||.|+++..+.. ...+|+|.+.... +.+ ..+ +||||++++++++++
T Consensus 9 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 88 (293)
T cd05053 9 LPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQE 88 (293)
T ss_pred cCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCC
Confidence 3446788999999999999999987643 3689999887421 111 245 799999999988754
No 388
>KOG4391|consensus
Probab=96.65 E-value=0.001 Score=53.44 Aligned_cols=76 Identities=14% Similarity=0.170 Sum_probs=55.8
Q ss_pred hCCc-ccCCCcCcCCCCCCCCCCcchHHHHHHHHHHHHHHHH--cCCCCEEEEEeCcccHHHHHHHHcCChhHHhhhhcc
Q psy4395 96 GLGY-QRDLSMRGAPYDFRKAPNENQEYFANFKALIEETYDL--NGGTPVVLVAHSMGSLMCLYFLQRQSSAWKSKFVRS 172 (283)
Q Consensus 96 ~~g~-~~~~d~~g~g~~~r~~~~~~~~~~~~l~~~i~~~~~~--~~~~~v~lvgHSmGg~va~~~~~~~~~~~~~~~v~~ 172 (283)
..+- ++.++.||+|.+...+ +-....-|-+++|+.+..+ ....++++.|-|+||.+|.+.+....++ +.+
T Consensus 104 ~l~mnv~ivsYRGYG~S~Gsp--sE~GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~r-----i~~ 176 (300)
T KOG4391|consen 104 NLKMNVLIVSYRGYGKSEGSP--SEEGLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDR-----ISA 176 (300)
T ss_pred HcCceEEEEEeeccccCCCCc--cccceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhh-----eee
Confidence 4455 7888999999875432 2333445667788887654 2456899999999999999999887776 888
Q ss_pred eEEecC
Q psy4395 173 LVSLAA 178 (283)
Q Consensus 173 ~i~i~~ 178 (283)
+|.-.+
T Consensus 177 ~ivENT 182 (300)
T KOG4391|consen 177 IIVENT 182 (300)
T ss_pred eeeech
Confidence 776544
No 389
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=96.62 E-value=0.0026 Score=53.83 Aligned_cols=60 Identities=18% Similarity=0.349 Sum_probs=46.8
Q ss_pred cCceeeeeeecccCCeeEEEEEEcC-----CCcEEEEEeechH-------HHH-----HhcCCCcceeeeEEEEECC
Q psy4395 223 MSDFEVGCPLGTGKFGHVYLAKEKT-----TQIMIALKVLYKV-------EII-----NERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 223 ~~~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~A~K~i~~~-------~~~-----~~~~~h~~iv~l~~~~~~~ 282 (283)
..+|.+.+.+|.|+||.||++.... ++..||+|.+... .+. ..+++||||+++++++.+.
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 80 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEG 80 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecC
Confidence 3568888999999999999998753 3578999998642 121 2368999999999998764
No 390
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=96.62 E-value=0.0024 Score=53.92 Aligned_cols=58 Identities=21% Similarity=0.329 Sum_probs=45.1
Q ss_pred ceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechH-------HHHH-----hcC---CCcceeeeEEEEECC
Q psy4395 225 DFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKV-------EIIN-----ERM---THQGMILAFTCYRNP 282 (283)
Q Consensus 225 ~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~-------~~~~-----~~~---~h~~iv~l~~~~~~~ 282 (283)
.|...+.+|.|+||.|+++....++..||+|.+... .+.. ..+ .|||++++++++++.
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~ 74 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKG 74 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeC
Confidence 355677899999999999999999999999988532 1111 133 499999999988754
No 391
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=96.62 E-value=0.0049 Score=52.50 Aligned_cols=57 Identities=21% Similarity=0.328 Sum_probs=45.4
Q ss_pred eeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH------H-----HHhcCCCcceeeeEEEEECC
Q psy4395 226 FEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE------I-----INERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 226 ~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~------~-----~~~~~~h~~iv~l~~~~~~~ 282 (283)
+.....+|.|++|.|+++..+.+++.+++|.+.... + ....+.||||++++++|..+
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~ 88 (285)
T cd06648 21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVG 88 (285)
T ss_pred hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcC
Confidence 444578999999999999999999999999885321 1 22367899999999988764
No 392
>PHA02988 hypothetical protein; Provisional
Probab=96.61 E-value=0.0053 Score=52.40 Aligned_cols=50 Identities=6% Similarity=0.111 Sum_probs=40.3
Q ss_pred eeecccCCeeEEEEEEcCCCcEEEEEeechHH---------H-----HHhcCCCcceeeeEEEEEC
Q psy4395 230 CPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE---------I-----INERMTHQGMILAFTCYRN 281 (283)
Q Consensus 230 ~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~---------~-----~~~~~~h~~iv~l~~~~~~ 281 (283)
..++.|+++.|+.++. +|+.||+|.+.+.. + ...+++|||||++++++.+
T Consensus 26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~ 89 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIID 89 (283)
T ss_pred eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEe
Confidence 5788999999999987 68899999997531 1 1227899999999998866
No 393
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=96.60 E-value=0.0049 Score=52.53 Aligned_cols=59 Identities=22% Similarity=0.430 Sum_probs=45.7
Q ss_pred CceeeeeeecccCCeeEEEEEEcC-----CCcEEEEEeechH------HHHH-----hcCCCcceeeeEEEEECC
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKT-----TQIMIALKVLYKV------EIIN-----ERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~A~K~i~~~------~~~~-----~~~~h~~iv~l~~~~~~~ 282 (283)
.+|.+.+.+|.|+||.|+++.... ++..+|+|.+.+. .+.+ .+++||||+++++++++.
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 79 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEG 79 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecC
Confidence 478889999999999999998633 4567999998642 1222 378999999999998764
No 394
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=96.59 E-value=0.0035 Score=52.89 Aligned_cols=59 Identities=27% Similarity=0.496 Sum_probs=46.3
Q ss_pred CceeeeeeecccCCeeEEEEEEcCC-----CcEEEEEeechHH-------HH-----HhcCCCcceeeeEEEEECC
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKTT-----QIMIALKVLYKVE-------II-----NERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~~-----~~~~A~K~i~~~~-------~~-----~~~~~h~~iv~l~~~~~~~ 282 (283)
++|.....+|.|+||.||+++.+.+ ...+++|.+.... +. ..+++||||+++++.+.+.
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 80 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREA 80 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCC
Confidence 5788899999999999999997643 3579999886421 22 2378999999999988764
No 395
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=96.58 E-value=0.0041 Score=52.80 Aligned_cols=59 Identities=24% Similarity=0.444 Sum_probs=45.1
Q ss_pred CceeeeeeecccCCeeEEEEEEc-----CCCcEEEEEeechH------HHH-----HhcCCCcceeeeEEEEECC
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEK-----TTQIMIALKVLYKV------EII-----NERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~A~K~i~~~------~~~-----~~~~~h~~iv~l~~~~~~~ 282 (283)
.++.+.+.+|.|+||.||++... .++..+|+|.+.+. .+. ...++||||+++++++.+.
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 79 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEG 79 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecC
Confidence 46788899999999999998743 34668999988642 121 1368999999999988764
No 396
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=96.57 E-value=0.0027 Score=54.47 Aligned_cols=54 Identities=20% Similarity=0.314 Sum_probs=44.0
Q ss_pred eeeecccCCeeEEEEEEcCCCcEEEEEeechHH------H-----HHhcCCCcceeeeEEEEECC
Q psy4395 229 GCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE------I-----INERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 229 ~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~------~-----~~~~~~h~~iv~l~~~~~~~ 282 (283)
...+|.|+||.|+++..+.++..+|+|.+.... + ....++||||++++++|+++
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 89 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVG 89 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeC
Confidence 467899999999999999999999999875311 1 22368999999999998765
No 397
>KOG0199|consensus
Probab=96.56 E-value=0.0017 Score=60.77 Aligned_cols=59 Identities=20% Similarity=0.279 Sum_probs=45.8
Q ss_pred CceeeeeeecccCCeeEEEEEEcCC-Cc--EEEEEeechHH-------HHHh-----cCCCcceeeeEEEEECC
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKTT-QI--MIALKVLYKVE-------IINE-----RMTHQGMILAFTCYRNP 282 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~~-~~--~~A~K~i~~~~-------~~~~-----~~~h~~iv~l~~~~~~~ 282 (283)
++..+.+.+|.|+||.|..+..+.. |. .||+|++.-.. +++| +|+|||+|+||++..++
T Consensus 110 e~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~q 183 (1039)
T KOG0199|consen 110 EQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLDQ 183 (1039)
T ss_pred HHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeeccc
Confidence 3555677899999999999998864 44 48999997542 3333 89999999999988653
No 398
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=96.54 E-value=0.0057 Score=51.03 Aligned_cols=57 Identities=18% Similarity=0.362 Sum_probs=45.1
Q ss_pred ccCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHHH---------HHhcCCCcceeeeEEEEE
Q psy4395 222 QMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI---------INERMTHQGMILAFTCYR 280 (283)
Q Consensus 222 ~~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~---------~~~~~~h~~iv~l~~~~~ 280 (283)
.+.+|.+.+.+|.|+||.|+++... |..+|+|.+..... ....++|++++++++++.
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~ 69 (256)
T cd05082 4 NMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIV 69 (256)
T ss_pred cHHhCeeeeeecccCCCeEEEEEEc--CCcEEEEEeCCCchHHHHHHHHHHHHhCCCCCeeeEEEEEE
Confidence 3568899999999999999998664 77899999875421 123689999999998653
No 399
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=96.54 E-value=0.0041 Score=54.33 Aligned_cols=61 Identities=23% Similarity=0.470 Sum_probs=44.9
Q ss_pred ccCceeeeeeecccCCeeEEEEEEcC-------CCcEEEEEeechH-------HHHH-----hcC-CCcceeeeEEEEEC
Q psy4395 222 QMSDFEVGCPLGTGKFGHVYLAKEKT-------TQIMIALKVLYKV-------EIIN-----ERM-THQGMILAFTCYRN 281 (283)
Q Consensus 222 ~~~~~~~~~~lg~g~fg~v~~~~~~~-------~~~~~A~K~i~~~-------~~~~-----~~~-~h~~iv~l~~~~~~ 281 (283)
...+|.+.+.+|.|+||.|+++.... ....+|+|.+... .+.+ .++ +||||+++++++..
T Consensus 10 ~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 89 (334)
T cd05100 10 SRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 89 (334)
T ss_pred CHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEcc
Confidence 33578899999999999999998643 2246899988632 1111 245 79999999998875
Q ss_pred C
Q psy4395 282 P 282 (283)
Q Consensus 282 ~ 282 (283)
+
T Consensus 90 ~ 90 (334)
T cd05100 90 D 90 (334)
T ss_pred C
Confidence 4
No 400
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=96.53 E-value=0.0047 Score=51.70 Aligned_cols=58 Identities=21% Similarity=0.408 Sum_probs=44.7
Q ss_pred cCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH-----H-----HHhcCCCcceeeeEEEEEC
Q psy4395 223 MSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE-----I-----INERMTHQGMILAFTCYRN 281 (283)
Q Consensus 223 ~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~-----~-----~~~~~~h~~iv~l~~~~~~ 281 (283)
..+|.+...+|.|++|.||++....++ .+|+|.+.... + ....+.||||++++++++.
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~-~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 72 (260)
T cd05069 5 RESLRLDVKLGQGCFGEVWMGTWNGTT-KVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVVSE 72 (260)
T ss_pred hHHeeeeeeecCcCCCeEEEEEEcCCc-eEEEEEcccCCccHHHHHHHHHHHHhCCCCCeeeEEEEEcC
Confidence 356888899999999999999876554 58999876431 1 2236899999999998764
No 401
>KOG0197|consensus
Probab=96.51 E-value=0.0022 Score=57.71 Aligned_cols=60 Identities=18% Similarity=0.410 Sum_probs=45.1
Q ss_pred ccCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeech-----HHHH-----HhcCCCcceeeeEEEEECC
Q psy4395 222 QMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYK-----VEII-----NERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 222 ~~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~-----~~~~-----~~~~~h~~iv~l~~~~~~~ 282 (283)
..+.+.+.+.||+|.||.|++.+.+ ....+|+|.+.. +.+. ..+|+|++||+||++-+.+
T Consensus 204 ~r~~l~l~~~LG~G~FG~V~~g~~~-~~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~ 273 (468)
T KOG0197|consen 204 PREELKLIRELGSGQFGEVWLGKWN-GSTKVAVKTIKEGSMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQ 273 (468)
T ss_pred cHHHHHHHHHhcCCccceEEEEEEc-CCCcccceEEeccccChhHHHHHHHHHHhCcccCeEEEEEEEecC
Confidence 3345677889999999999999886 334677777765 2233 3389999999999987654
No 402
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=96.51 E-value=0.0058 Score=52.72 Aligned_cols=58 Identities=28% Similarity=0.468 Sum_probs=46.7
Q ss_pred ceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechH---------HHH-----HhcCCCcceeeeEEEEECC
Q psy4395 225 DFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKV---------EII-----NERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 225 ~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~---------~~~-----~~~~~h~~iv~l~~~~~~~ 282 (283)
.|...+.+|.|++|.|+++..+.++..+|+|.+... .+. ...++|||++++++++..+
T Consensus 16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 87 (308)
T cd06634 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLRE 87 (308)
T ss_pred HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcC
Confidence 466678899999999999999999999999998631 111 2367999999999988765
No 403
>PLN03037 lipase class 3 family protein; Provisional
Probab=96.50 E-value=0.0035 Score=56.99 Aligned_cols=46 Identities=20% Similarity=0.291 Sum_probs=29.5
Q ss_pred CCEEEEEeCcccHHHHHHHHcCChhHHhhhhcceEEecCCCCcchh
Q psy4395 140 TPVVLVAHSMGSLMCLYFLQRQSSAWKSKFVRSLVSLAAPWGGSVK 185 (283)
Q Consensus 140 ~~v~lvgHSmGg~va~~~~~~~~~~~~~~~v~~~i~i~~p~~g~~~ 185 (283)
.++.+.||||||.+|..++............-.+++.++|-.|...
T Consensus 318 ~SItVTGHSLGGALAtLaA~DIa~~~p~~~~VtvyTFGsPRVGN~a 363 (525)
T PLN03037 318 VSLTITGHSLGGALALLNAYEAARSVPALSNISVISFGAPRVGNLA 363 (525)
T ss_pred ceEEEeccCHHHHHHHHHHHHHHHhCCCCCCeeEEEecCCCccCHH
Confidence 4799999999999998776542111000001246778899888654
No 404
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=96.47 E-value=0.0057 Score=51.77 Aligned_cols=59 Identities=12% Similarity=0.204 Sum_probs=45.3
Q ss_pred cCceeeeeeecccCCeeEEEEEEcCC----CcEEEEEeechHH-------HH-----HhcCCCcceeeeEEEEEC
Q psy4395 223 MSDFEVGCPLGTGKFGHVYLAKEKTT----QIMIALKVLYKVE-------II-----NERMTHQGMILAFTCYRN 281 (283)
Q Consensus 223 ~~~~~~~~~lg~g~fg~v~~~~~~~~----~~~~A~K~i~~~~-------~~-----~~~~~h~~iv~l~~~~~~ 281 (283)
.++|.+...+|.|+||.|+.+....+ +..+++|.+.... +. ..+++||||++++++..+
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~ 79 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIE 79 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec
Confidence 35788889999999999999998863 5779999886421 11 236799999999997544
No 405
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=96.46 E-value=0.0077 Score=52.90 Aligned_cols=84 Identities=12% Similarity=0.023 Sum_probs=45.8
Q ss_pred HHHHHHHhCCc-ccCCCcCcCCCCCCCCCC------cchHHH---------------HHHHHHHHHHHHH--cCCCCEEE
Q psy4395 89 YIAAALVGLGY-QRDLSMRGAPYDFRKAPN------ENQEYF---------------ANFKALIEETYDL--NGGTPVVL 144 (283)
Q Consensus 89 ~l~~~L~~~g~-~~~~d~~g~g~~~r~~~~------~~~~~~---------------~~l~~~i~~~~~~--~~~~~v~l 144 (283)
.++..|+++|| ++++|.+|+|.-.+.... +..... -+....++-+... -..+++-+
T Consensus 151 ~~g~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~ 230 (390)
T PF12715_consen 151 DYGDQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGC 230 (390)
T ss_dssp -HHHHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEE
T ss_pred cHHHHHHhCCCEEEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEE
Confidence 46788999999 799999999853222211 001110 1112233333221 11247999
Q ss_pred EEeCcccHHHHHHHHcCChhHHhhhhcceEEecC
Q psy4395 145 VAHSMGSLMCLYFLQRQSSAWKSKFVRSLVSLAA 178 (283)
Q Consensus 145 vgHSmGg~va~~~~~~~~~~~~~~~v~~~i~i~~ 178 (283)
+|+||||..+..++...+. |++.|..+.
T Consensus 231 ~GfSmGg~~a~~LaALDdR------Ika~v~~~~ 258 (390)
T PF12715_consen 231 MGFSMGGYRAWWLAALDDR------IKATVANGY 258 (390)
T ss_dssp EEEGGGHHHHHHHHHH-TT--------EEEEES-
T ss_pred EeecccHHHHHHHHHcchh------hHhHhhhhh
Confidence 9999999999988887554 777765543
No 406
>PLN02802 triacylglycerol lipase
Probab=96.46 E-value=0.005 Score=55.91 Aligned_cols=61 Identities=13% Similarity=0.226 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHcCC--CCEEEEEeCcccHHHHHHHHcCChhHHhhhhcceEEecCCCCcchh
Q psy4395 125 NFKALIEETYDLNGG--TPVVLVAHSMGSLMCLYFLQRQSSAWKSKFVRSLVSLAAPWGGSVK 185 (283)
Q Consensus 125 ~l~~~i~~~~~~~~~--~~v~lvgHSmGg~va~~~~~~~~~~~~~~~v~~~i~i~~p~~g~~~ 185 (283)
++.+.|..+.+.+++ ..|++.||||||.+|..++............-.+++.++|-.|...
T Consensus 313 qVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL~~~~~~~~pV~vyTFGsPRVGN~a 375 (509)
T PLN02802 313 SVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADELATCVPAAPPVAVFSFGGPRVGNRA 375 (509)
T ss_pred HHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHHHHhCCCCCceEEEEcCCCCcccHH
Confidence 444555555555554 3689999999999998776653221111101247888999888644
No 407
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=96.46 E-value=0.008 Score=51.66 Aligned_cols=69 Identities=16% Similarity=0.136 Sum_probs=43.3
Q ss_pred HHHHHHHHhCCc-ccCCCcCcCCCCCCCCCCcchHHHHHHHHHHHHHHHHc------CCCCEEEEEeCcccHHHHHHHHc
Q psy4395 88 SYIAAALVGLGY-QRDLSMRGAPYDFRKAPNENQEYFANFKALIEETYDLN------GGTPVVLVAHSMGSLMCLYFLQR 160 (283)
Q Consensus 88 ~~l~~~L~~~g~-~~~~d~~g~g~~~r~~~~~~~~~~~~l~~~i~~~~~~~------~~~~v~lvgHSmGg~va~~~~~~ 160 (283)
..++..+.++|| |++.|+.|.|-.+-.. ......+...|...++.. ...++.++|||-||.-+...+..
T Consensus 16 ~~~l~~~L~~GyaVv~pDY~Glg~~y~~~----~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~l 91 (290)
T PF03583_consen 16 APFLAAWLARGYAVVAPDYEGLGTPYLNG----RSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAEL 91 (290)
T ss_pred HHHHHHHHHCCCEEEecCCCCCCCcccCc----HhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHHH
Confidence 356677778999 8999999987522111 112233333333333221 23589999999999988766544
No 408
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=96.44 E-value=0.0053 Score=51.67 Aligned_cols=60 Identities=20% Similarity=0.393 Sum_probs=45.9
Q ss_pred cCceeeeeeecccCCeeEEEEEEcCC---CcEEEEEeechHH-------HHH-----hcCCCcceeeeEEEEECC
Q psy4395 223 MSDFEVGCPLGTGKFGHVYLAKEKTT---QIMIALKVLYKVE-------IIN-----ERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 223 ~~~~~~~~~lg~g~fg~v~~~~~~~~---~~~~A~K~i~~~~-------~~~-----~~~~h~~iv~l~~~~~~~ 282 (283)
..++.+.+.+|.|+||.||.+..... ...+|+|.+.... +.+ .+++||||++++++++++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~ 79 (270)
T cd05056 5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITEN 79 (270)
T ss_pred hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcCC
Confidence 35688889999999999999987654 3468999886421 222 368999999999988764
No 409
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=96.44 E-value=0.0027 Score=54.45 Aligned_cols=57 Identities=23% Similarity=0.316 Sum_probs=44.8
Q ss_pred eeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH------H-----HHhcCCCcceeeeEEEEECC
Q psy4395 226 FEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE------I-----INERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 226 ~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~------~-----~~~~~~h~~iv~l~~~~~~~ 282 (283)
+.....+|.|+||.|+++....++..||+|.+.... + ....++||||+++++.+..+
T Consensus 24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~ 91 (292)
T cd06658 24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVG 91 (292)
T ss_pred HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecC
Confidence 333567899999999999999999999999986421 1 12367999999999887754
No 410
>KOG0574|consensus
Probab=96.43 E-value=0.0002 Score=60.34 Aligned_cols=56 Identities=23% Similarity=0.360 Sum_probs=46.9
Q ss_pred CceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechH----HH-----HHhcCCCcceeeeEEEE
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKV----EI-----INERMTHQGMILAFTCY 279 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~----~~-----~~~~~~h~~iv~l~~~~ 279 (283)
+.|.+...+|.|+||.|+.+.++.+|+.+|+|.+.-+ ++ +.+....|++|++|++|
T Consensus 33 EVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~sDLQEIIKEISIMQQC~S~yVVKYYGSY 97 (502)
T KOG0574|consen 33 EVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDTDLQEIIKEISIMQQCKSKYVVKYYGSY 97 (502)
T ss_pred HHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccchHHHHHHHHHHHHHcCCchhhhhhhhh
Confidence 4578888999999999999999999999999998632 23 33467899999999865
No 411
>KOG1094|consensus
Probab=96.42 E-value=0.0051 Score=56.50 Aligned_cols=59 Identities=22% Similarity=0.416 Sum_probs=46.3
Q ss_pred cccCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH-------HHHh-----cCCCcceeeeEEEEE
Q psy4395 221 WQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE-------IINE-----RMTHQGMILAFTCYR 280 (283)
Q Consensus 221 ~~~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~-------~~~~-----~~~h~~iv~l~~~~~ 280 (283)
+..+.+.+.+.||+|.||.|.+++... +..||+|.++... +.++ .+.|||||+|.++-.
T Consensus 535 fPRs~L~~~ekiGeGqFGEVhLCeveg-~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~ 605 (807)
T KOG1094|consen 535 FPRSRLRFKEKIGEGQFGEVHLCEVEG-PLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCV 605 (807)
T ss_pred cchhheehhhhhcCcccceeEEEEecC-ceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeee
Confidence 444567788899999999999998764 6899999998642 2222 689999999999743
No 412
>KOG0578|consensus
Probab=96.42 E-value=0.0012 Score=59.85 Aligned_cols=57 Identities=21% Similarity=0.356 Sum_probs=47.5
Q ss_pred CceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH------H-----HHhcCCCcceeeeEEEEE
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE------I-----INERMTHQGMILAFTCYR 280 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~------~-----~~~~~~h~~iv~l~~~~~ 280 (283)
..|.....+|+|+.|.||.|....+++.||+|.+.+.. + .....+|+|||+++++|-
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Syl 340 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYL 340 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhc
Confidence 45777789999999999999999999999999998643 2 223689999999988764
No 413
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=96.39 E-value=0.0073 Score=51.55 Aligned_cols=60 Identities=22% Similarity=0.387 Sum_probs=46.3
Q ss_pred cCceeeeeeecccCCeeEEEEEEc-----CCCcEEEEEeechHH------HH-----HhcCCCcceeeeEEEEECC
Q psy4395 223 MSDFEVGCPLGTGKFGHVYLAKEK-----TTQIMIALKVLYKVE------II-----NERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 223 ~~~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~A~K~i~~~~------~~-----~~~~~h~~iv~l~~~~~~~ 282 (283)
..+|.+.+.+|.|+||.||+++.. .++..+++|.+.... +. ..+++||||++++++++++
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 79 (291)
T cd05094 4 RRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDG 79 (291)
T ss_pred hHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccC
Confidence 357888999999999999999854 345678999986432 21 2378999999999988764
No 414
>PLN02571 triacylglycerol lipase
Probab=96.33 E-value=0.0093 Score=53.13 Aligned_cols=61 Identities=11% Similarity=0.092 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHcCCC--CEEEEEeCcccHHHHHHHHcCChhHH-------h--hhhcceEEecCCCCcchh
Q psy4395 124 ANFKALIEETYDLNGGT--PVVLVAHSMGSLMCLYFLQRQSSAWK-------S--KFVRSLVSLAAPWGGSVK 185 (283)
Q Consensus 124 ~~l~~~i~~~~~~~~~~--~v~lvgHSmGg~va~~~~~~~~~~~~-------~--~~v~~~i~i~~p~~g~~~ 185 (283)
+++.+.|..+.+.++.. ++++.||||||.+|..++...-.... . ..| .+++.++|-.|...
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~dl~~~g~n~~~~~~~~~~~V-~v~TFGsPRVGN~~ 279 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVDIVANGFNRSKSRPNKSCPV-TAFVFASPRVGDSD 279 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHHHHHhcccccccccccCcce-EEEEeCCCCccCHH
Confidence 44555555555555443 68999999999999887664211000 0 012 35678889888643
No 415
>KOG3847|consensus
Probab=96.33 E-value=0.014 Score=49.62 Aligned_cols=32 Identities=19% Similarity=0.349 Sum_probs=23.9
Q ss_pred CEEEEEeCcccHHHHHHHHcCChhHHhhhhcceEEecC
Q psy4395 141 PVVLVAHSMGSLMCLYFLQRQSSAWKSKFVRSLVSLAA 178 (283)
Q Consensus 141 ~v~lvgHSmGg~va~~~~~~~~~~~~~~~v~~~i~i~~ 178 (283)
++.++|||.||+.+......+-+ .+..|++..
T Consensus 242 ~~aViGHSFGgAT~i~~ss~~t~------FrcaI~lD~ 273 (399)
T KOG3847|consen 242 QAAVIGHSFGGATSIASSSSHTD------FRCAIALDA 273 (399)
T ss_pred hhhheeccccchhhhhhhccccc------eeeeeeeee
Confidence 57899999999999887776443 566666543
No 416
>KOG1290|consensus
Probab=96.31 E-value=0.012 Score=52.90 Aligned_cols=58 Identities=21% Similarity=0.420 Sum_probs=45.7
Q ss_pred CceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH-----------HHHh-------cCCCcceeeeEEEEEC
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE-----------IINE-------RMTHQGMILAFTCYRN 281 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~-----------~~~~-------~~~h~~iv~l~~~~~~ 281 (283)
..|.+.+.+|.|-|++|+++.+....+.||||+++... ++.. ...-..||+|++-|..
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fkh 153 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKH 153 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeecccee
Confidence 57889999999999999999999999999999997532 1111 2234468999988863
No 417
>KOG0587|consensus
Probab=96.30 E-value=0.0094 Score=57.08 Aligned_cols=59 Identities=20% Similarity=0.401 Sum_probs=49.8
Q ss_pred ccCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH-----------HHHhcCCCcceeeeEEEEE
Q psy4395 222 QMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE-----------IINERMTHQGMILAFTCYR 280 (283)
Q Consensus 222 ~~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~-----------~~~~~~~h~~iv~l~~~~~ 280 (283)
..+.|++...+|.|.+|.||+++.+.+++..|+|+..... +.+..-+|||++.+|++|-
T Consensus 17 p~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~ 86 (953)
T KOG0587|consen 17 PADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFI 86 (953)
T ss_pred CCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEE
Confidence 3467899999999999999999999999999999997642 2333568999999999874
No 418
>PHA02882 putative serine/threonine kinase; Provisional
Probab=96.22 E-value=0.011 Score=50.60 Aligned_cols=57 Identities=19% Similarity=0.320 Sum_probs=42.7
Q ss_pred CceeeeeeecccCCeeEEEEEEcCC---CcEEEEEeechHH--H--------------------HHhcCCCcceeeeEEE
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKTT---QIMIALKVLYKVE--I--------------------INERMTHQGMILAFTC 278 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~~---~~~~A~K~i~~~~--~--------------------~~~~~~h~~iv~l~~~ 278 (283)
..|.+.+.+|.|+||.||++....+ +..+|+|+..... + ....++|++|++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 5799999999999999999998887 5667777643110 0 0125689999999986
Q ss_pred EE
Q psy4395 279 YR 280 (283)
Q Consensus 279 ~~ 280 (283)
..
T Consensus 92 ~~ 93 (294)
T PHA02882 92 GS 93 (294)
T ss_pred ee
Confidence 54
No 419
>PLN02324 triacylglycerol lipase
Probab=96.21 E-value=0.01 Score=52.87 Aligned_cols=63 Identities=13% Similarity=0.211 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHHHcCC--CCEEEEEeCcccHHHHHHHHcCChhH----------HhhhhcceEEecCCCCcchh
Q psy4395 122 YFANFKALIEETYDLNGG--TPVVLVAHSMGSLMCLYFLQRQSSAW----------KSKFVRSLVSLAAPWGGSVK 185 (283)
Q Consensus 122 ~~~~l~~~i~~~~~~~~~--~~v~lvgHSmGg~va~~~~~~~~~~~----------~~~~v~~~i~i~~p~~g~~~ 185 (283)
..+++.+.|..+.+.++. ..|++.||||||.+|..++...-... ....| .+++.++|-.|...
T Consensus 195 areqVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~dl~~~~~n~~~~~~~~~~~~V-~v~TFGsPRVGN~~ 269 (415)
T PLN02324 195 AQEQVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAADLVYGKKNKINISLQKKQVPI-TVFAFGSPRIGDHN 269 (415)
T ss_pred HHHHHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHHHHHhcccccccccccCCCce-EEEEecCCCcCCHH
Confidence 334556666666666664 36999999999999987765421100 00013 36778999888644
No 420
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=96.20 E-value=0.04 Score=48.02 Aligned_cols=84 Identities=14% Similarity=0.174 Sum_probs=50.4
Q ss_pred HHHhCCc-ccCCCcCcCCCCC---CC----C--------CCc------chHHHHHHHHHHHHHHHH--cCCCCEEEEEeC
Q psy4395 93 ALVGLGY-QRDLSMRGAPYDF---RK----A--------PNE------NQEYFANFKALIEETYDL--NGGTPVVLVAHS 148 (283)
Q Consensus 93 ~L~~~g~-~~~~d~~g~g~~~---r~----~--------~~~------~~~~~~~l~~~i~~~~~~--~~~~~v~lvgHS 148 (283)
.++..|| ++.+|.||.|... .. . ..+ ....+.|....++.+... ....++.+.|.|
T Consensus 104 ~~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~S 183 (320)
T PF05448_consen 104 PWAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGS 183 (320)
T ss_dssp HHHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEET
T ss_pred ccccCCeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeec
Confidence 3678899 8999999988211 00 0 001 112334556666666543 123589999999
Q ss_pred cccHHHHHHHHcCChhHHhhhhcceEEecCCCCcc
Q psy4395 149 MGSLMCLYFLQRQSSAWKSKFVRSLVSLAAPWGGS 183 (283)
Q Consensus 149 mGg~va~~~~~~~~~~~~~~~v~~~i~i~~p~~g~ 183 (283)
+||.+++.++...+. |++.+... |+.+.
T Consensus 184 qGG~lal~~aaLd~r------v~~~~~~v-P~l~d 211 (320)
T PF05448_consen 184 QGGGLALAAAALDPR------VKAAAADV-PFLCD 211 (320)
T ss_dssp HHHHHHHHHHHHSST-------SEEEEES-ESSSS
T ss_pred CchHHHHHHHHhCcc------ccEEEecC-CCccc
Confidence 999999999988765 88777654 44443
No 421
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=96.18 E-value=0.016 Score=50.16 Aligned_cols=61 Identities=26% Similarity=0.429 Sum_probs=45.2
Q ss_pred ccCceeeeeeecccCCeeEEEEEEcC-------CCcEEEEEeechHH-------HHHh-----cC-CCcceeeeEEEEEC
Q psy4395 222 QMSDFEVGCPLGTGKFGHVYLAKEKT-------TQIMIALKVLYKVE-------IINE-----RM-THQGMILAFTCYRN 281 (283)
Q Consensus 222 ~~~~~~~~~~lg~g~fg~v~~~~~~~-------~~~~~A~K~i~~~~-------~~~~-----~~-~h~~iv~l~~~~~~ 281 (283)
...+|.+.+.+|.|+||.||+++... ....+|+|.+.... +..+ .+ +||||+++++++.+
T Consensus 10 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 89 (314)
T cd05099 10 PRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQ 89 (314)
T ss_pred cHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEcc
Confidence 34678899999999999999998642 34578999887421 1112 34 69999999998875
Q ss_pred C
Q psy4395 282 P 282 (283)
Q Consensus 282 ~ 282 (283)
+
T Consensus 90 ~ 90 (314)
T cd05099 90 E 90 (314)
T ss_pred C
Confidence 4
No 422
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=96.16 E-value=0.0089 Score=53.92 Aligned_cols=35 Identities=20% Similarity=0.264 Sum_probs=31.3
Q ss_pred CCEEEEEeCcccHHHHHHHHcCChhHHhhhhcceEEecCC
Q psy4395 140 TPVVLVAHSMGSLMCLYFLQRQSSAWKSKFVRSLVSLAAP 179 (283)
Q Consensus 140 ~~v~lvgHSmGg~va~~~~~~~~~~~~~~~v~~~i~i~~p 179 (283)
...+|.|+||||+.|++++..+|+. +..++++++.
T Consensus 288 ~~~~IaG~S~GGl~AL~~al~~Pd~-----Fg~v~s~Sgs 322 (411)
T PRK10439 288 DRTVVAGQSFGGLAALYAGLHWPER-----FGCVLSQSGS 322 (411)
T ss_pred cceEEEEEChHHHHHHHHHHhCccc-----ccEEEEeccc
Confidence 4688999999999999999999998 8888888764
No 423
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=96.15 E-value=0.023 Score=49.57 Aligned_cols=75 Identities=21% Similarity=0.286 Sum_probs=48.4
Q ss_pred HHHHHHHHHhCCc-ccCCCcCcCCCC--C-------CCCCCcchHHHHHHHHHHHHHHHH---------cCCCCEEEEEe
Q psy4395 87 FSYIAAALVGLGY-QRDLSMRGAPYD--F-------RKAPNENQEYFANFKALIEETYDL---------NGGTPVVLVAH 147 (283)
Q Consensus 87 ~~~l~~~L~~~g~-~~~~d~~g~g~~--~-------r~~~~~~~~~~~~l~~~i~~~~~~---------~~~~~v~lvgH 147 (283)
|+.+++.|++.|| |.+.|++|--.. - +..+..+-+-..|+..+|+.+.+. ....+|-++||
T Consensus 87 f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~sP~l~~~ld~~~Vgv~Gh 166 (365)
T COG4188 87 FAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTASPALAGRLDPQRVGVLGH 166 (365)
T ss_pred hhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhcCcccccccCccceEEEec
Confidence 7789999999999 788888883110 0 011111222334555566555544 12348999999
Q ss_pred CcccHHHHHHHHcC
Q psy4395 148 SMGSLMCLYFLQRQ 161 (283)
Q Consensus 148 SmGg~va~~~~~~~ 161 (283)
|+||..+++.+...
T Consensus 167 S~GG~T~m~laGA~ 180 (365)
T COG4188 167 SFGGYTAMELAGAE 180 (365)
T ss_pred ccccHHHHHhcccc
Confidence 99999999886653
No 424
>KOG0193|consensus
Probab=96.15 E-value=0.0027 Score=58.36 Aligned_cols=58 Identities=26% Similarity=0.469 Sum_probs=45.3
Q ss_pred ccCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH--------HHH-----hcCCCcceeeeEEEEECC
Q psy4395 222 QMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE--------IIN-----ERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 222 ~~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~--------~~~-----~~~~h~~iv~l~~~~~~~ 282 (283)
..++..+...||.|+||+||.+++-- .||||.++.+. +.+ ++++|.||+-+.+++..|
T Consensus 390 p~~ev~l~~rIGsGsFGtV~Rg~whG---dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p 460 (678)
T KOG0193|consen 390 PPEEVLLGERIGSGSFGTVYRGRWHG---DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNP 460 (678)
T ss_pred CHHHhhccceeccccccceeeccccc---ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCC
Confidence 34566778899999999999998753 48999998642 222 378999999999988765
No 425
>KOG4257|consensus
Probab=96.15 E-value=0.0057 Score=56.66 Aligned_cols=56 Identities=21% Similarity=0.272 Sum_probs=43.0
Q ss_pred eeeeeeecccCCeeEEEEEEcCC--C--cEEEEEeechHH------------HHHhcCCCcceeeeEEEEEC
Q psy4395 226 FEVGCPLGTGKFGHVYLAKEKTT--Q--IMIALKVLYKVE------------IINERMTHQGMILAFTCYRN 281 (283)
Q Consensus 226 ~~~~~~lg~g~fg~v~~~~~~~~--~--~~~A~K~i~~~~------------~~~~~~~h~~iv~l~~~~~~ 281 (283)
..+.+.||.|.||-||.+..... | --||+|..+.+. ++.++.+|||||+|+++..+
T Consensus 391 Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e 462 (974)
T KOG4257|consen 391 ITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE 462 (974)
T ss_pred ccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec
Confidence 33456899999999999987654 2 358999998732 34558999999999998664
No 426
>KOG1095|consensus
Probab=96.14 E-value=0.0082 Score=59.15 Aligned_cols=58 Identities=21% Similarity=0.353 Sum_probs=44.0
Q ss_pred cCceeeeeeecccCCeeEEEEEEcCC-C----cEEEEEeechHH-------H-----HHhcCCCcceeeeEEEEE
Q psy4395 223 MSDFEVGCPLGTGKFGHVYLAKEKTT-Q----IMIALKVLYKVE-------I-----INERMTHQGMILAFTCYR 280 (283)
Q Consensus 223 ~~~~~~~~~lg~g~fg~v~~~~~~~~-~----~~~A~K~i~~~~-------~-----~~~~~~h~~iv~l~~~~~ 280 (283)
.....+.+.+|+|.||.||.+..... | ..||+|.+.+.. + ...+.+|||||++.++--
T Consensus 691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l 765 (1025)
T KOG1095|consen 691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCL 765 (1025)
T ss_pred hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeec
Confidence 34567788999999999999987643 3 248999997642 2 233789999999999643
No 427
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=96.12 E-value=0.015 Score=51.17 Aligned_cols=87 Identities=21% Similarity=0.141 Sum_probs=61.9
Q ss_pred chHHHHHHHHHhCCc-ccCCCcCcCCCCCCCCCCcchHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCCh
Q psy4395 85 SYFSYIAAALVGLGY-QRDLSMRGAPYDFRKAPNENQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSS 163 (283)
Q Consensus 85 ~~~~~l~~~L~~~g~-~~~~d~~g~g~~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~~ 163 (283)
..-+.+...|.+.|+ |+.+|-.=+-.+-|. -+....|+..+|.....+++.++|.|||.|.|+=+.-..-...|.
T Consensus 274 ~lDk~v~~~l~~~gvpVvGvdsLRYfW~~rt----Pe~~a~Dl~r~i~~y~~~w~~~~~~liGySfGADvlP~~~n~L~~ 349 (456)
T COG3946 274 DLDKEVAEALQKQGVPVVGVDSLRYFWSERT----PEQIAADLSRLIRFYARRWGAKRVLLIGYSFGADVLPFAYNRLPP 349 (456)
T ss_pred hhhHHHHHHHHHCCCceeeeehhhhhhccCC----HHHHHHHHHHHHHHHHHhhCcceEEEEeecccchhhHHHHHhCCH
Confidence 345688999999999 888874332222233 366789999999999888898999999999999777665555555
Q ss_pred hHHhhhhcceEEe
Q psy4395 164 AWKSKFVRSLVSL 176 (283)
Q Consensus 164 ~~~~~~v~~~i~i 176 (283)
.- .+.|+.+.++
T Consensus 350 ~~-r~~v~~~~ll 361 (456)
T COG3946 350 AT-RQRVRMVSLL 361 (456)
T ss_pred HH-HHHHHHHHHH
Confidence 42 2335554444
No 428
>KOG0576|consensus
Probab=96.10 E-value=0.00069 Score=62.75 Aligned_cols=58 Identities=26% Similarity=0.434 Sum_probs=49.0
Q ss_pred cCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH-----------HHHhcCCCcceeeeEEEEE
Q psy4395 223 MSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE-----------IINERMTHQGMILAFTCYR 280 (283)
Q Consensus 223 ~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~-----------~~~~~~~h~~iv~l~~~~~ 280 (283)
.++|++...+|.|+||-||+++++.++.+.|+|+|+.+. .+.+.-+|||||-+++.+-
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsyl 82 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYL 82 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhh
Confidence 468999999999999999999999999999999998752 1223568999999888664
No 429
>KOG2052|consensus
Probab=96.09 E-value=0.0068 Score=53.82 Aligned_cols=58 Identities=17% Similarity=0.287 Sum_probs=45.2
Q ss_pred cccccCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechH---HHHHh-------cCCCcceeeeEEE
Q psy4395 219 YRWQMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKV---EIINE-------RMTHQGMILAFTC 278 (283)
Q Consensus 219 ~~~~~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~---~~~~~-------~~~h~~iv~l~~~ 278 (283)
++-...+..+.+.+|+|.||.|+..+.+ |..||+|+.... ...+| -|+|+||..+.++
T Consensus 206 QRTiarqI~L~e~IGkGRyGEVwrG~wr--Ge~VAVKiF~srdE~SWfrEtEIYqTvmLRHENILgFIaa 273 (513)
T KOG2052|consen 206 QRTIARQIVLQEIIGKGRFGEVWRGRWR--GEDVAVKIFSSRDERSWFRETEIYQTVMLRHENILGFIAA 273 (513)
T ss_pred HHhhhheeEEEEEecCccccceeecccc--CCceEEEEecccchhhhhhHHHHHHHHHhccchhhhhhhc
Confidence 3334457888999999999999998774 888999999743 24443 5799999998764
No 430
>KOG0584|consensus
Probab=96.08 E-value=0.0023 Score=58.82 Aligned_cols=56 Identities=20% Similarity=0.346 Sum_probs=42.3
Q ss_pred eeeeecccCCeeEEEEEEcCCCcEEEEEeechHHH---------------HHhcCCCcceeeeEEEEECCC
Q psy4395 228 VGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI---------------INERMTHQGMILAFTCYRNPH 283 (283)
Q Consensus 228 ~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~---------------~~~~~~h~~iv~l~~~~~~~~ 283 (283)
....+|+|+|-+||.+-+..+|..||=-.++..++ ....|+|||||++|++|.+.+
T Consensus 44 ~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~ 114 (632)
T KOG0584|consen 44 FDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTD 114 (632)
T ss_pred hhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCC
Confidence 34588999999999999999998888322222211 123799999999999998863
No 431
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=96.07 E-value=0.021 Score=52.09 Aligned_cols=79 Identities=13% Similarity=0.091 Sum_probs=56.0
Q ss_pred CcccCCCcCcCCCCCCCCC--------CcchHHHHHHHHHHHHHHHHc---CCCCEEEEEeCcccHHHHHHHHcCChhHH
Q psy4395 98 GYQRDLSMRGAPYDFRKAP--------NENQEYFANFKALIEETYDLN---GGTPVVLVAHSMGSLMCLYFLQRQSSAWK 166 (283)
Q Consensus 98 g~~~~~d~~g~g~~~r~~~--------~~~~~~~~~l~~~i~~~~~~~---~~~~v~lvgHSmGg~va~~~~~~~~~~~~ 166 (283)
+.++.+.+|=+|.|.-... .+.+..++|+..+|+.+..+. ...|++++|-|.||.+|..+-.++|+.
T Consensus 60 a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~-- 137 (434)
T PF05577_consen 60 ALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHL-- 137 (434)
T ss_dssp EEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT--
T ss_pred CcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCe--
Confidence 3478888999887653221 146778899999999998654 445999999999999999999999998
Q ss_pred hhhhcceEEecCCCC
Q psy4395 167 SKFVRSLVSLAAPWG 181 (283)
Q Consensus 167 ~~~v~~~i~i~~p~~ 181 (283)
|.+.+.-++|..
T Consensus 138 ---~~ga~ASSapv~ 149 (434)
T PF05577_consen 138 ---FDGAWASSAPVQ 149 (434)
T ss_dssp ----SEEEEET--CC
T ss_pred ---eEEEEeccceee
Confidence 899998888864
No 432
>PLN02753 triacylglycerol lipase
Probab=96.01 E-value=0.014 Score=53.34 Aligned_cols=63 Identities=13% Similarity=0.250 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHHcC-----CCCEEEEEeCcccHHHHHHHHcCChhHH-----hhhh-cceEEecCCCCcchh
Q psy4395 123 FANFKALIEETYDLNG-----GTPVVLVAHSMGSLMCLYFLQRQSSAWK-----SKFV-RSLVSLAAPWGGSVK 185 (283)
Q Consensus 123 ~~~l~~~i~~~~~~~~-----~~~v~lvgHSmGg~va~~~~~~~~~~~~-----~~~v-~~~i~i~~p~~g~~~ 185 (283)
.+++.+.|..+.+.++ ..+|++.||||||.+|..++...-.... .+.+ -.+++.++|-.|...
T Consensus 290 reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~Dla~~g~n~~~~~~~~pV~vyTFGsPRVGN~a 363 (531)
T PLN02753 290 REQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYDIAEMGLNRSKKGKVIPVTVLTYGGPRVGNVR 363 (531)
T ss_pred HHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHHHHHhcccccccCccCceEEEEeCCCCccCHH
Confidence 3445555566555553 3589999999999999887654211000 0001 137888999888644
No 433
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=95.97 E-value=0.023 Score=47.40 Aligned_cols=78 Identities=15% Similarity=0.175 Sum_probs=52.8
Q ss_pred HhCCc-ccCCCcCcCCCCCCCC---CCc-------------------chHHHHHHHHHHHHHHHHc--CCCCEEEEEeCc
Q psy4395 95 VGLGY-QRDLSMRGAPYDFRKA---PNE-------------------NQEYFANFKALIEETYDLN--GGTPVVLVAHSM 149 (283)
Q Consensus 95 ~~~g~-~~~~d~~g~g~~~r~~---~~~-------------------~~~~~~~l~~~i~~~~~~~--~~~~v~lvgHSm 149 (283)
+..|| ++..|.||.|.+|... +.+ ....+.|+..+++.+..-. ...+|.+-|-|.
T Consensus 106 a~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~Sq 185 (321)
T COG3458 106 AVAGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQ 185 (321)
T ss_pred cccceeEEEEecccCCCccccCCCCCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEecccc
Confidence 45789 8999999998775411 000 1234456666777665432 234799999999
Q ss_pred ccHHHHHHHHcCChhHHhhhhcceEEecC
Q psy4395 150 GSLMCLYFLQRQSSAWKSKFVRSLVSLAA 178 (283)
Q Consensus 150 Gg~va~~~~~~~~~~~~~~~v~~~i~i~~ 178 (283)
||.+++.++...|. |++++.+-+
T Consensus 186 GGglalaaaal~~r------ik~~~~~~P 208 (321)
T COG3458 186 GGGLALAAAALDPR------IKAVVADYP 208 (321)
T ss_pred CchhhhhhhhcChh------hhccccccc
Confidence 99999998887664 777765543
No 434
>KOG1989|consensus
Probab=95.95 E-value=0.017 Score=55.07 Aligned_cols=55 Identities=24% Similarity=0.329 Sum_probs=43.0
Q ss_pred CceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechH------HHH-----HhcC-CCcceeeeEEE
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKV------EII-----NERM-THQGMILAFTC 278 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~------~~~-----~~~~-~h~~iv~l~~~ 278 (283)
....+.+.|.+|+|+.||+|+....|..||+|.+--. .+. .+.| .|+|||.++++
T Consensus 37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yids 103 (738)
T KOG1989|consen 37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDS 103 (738)
T ss_pred EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEecc
Confidence 3567788999999999999999999899999887522 112 2245 49999999984
No 435
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=95.91 E-value=0.067 Score=48.77 Aligned_cols=81 Identities=17% Similarity=0.195 Sum_probs=59.3
Q ss_pred HHHHHHHhCCc-ccCCCcCcCCCCCCCCCCcchHHHHHHHHHHHHHHHHcCCC-CEEEEEeCcccHHHHHHHHcCChhHH
Q psy4395 89 YIAAALVGLGY-QRDLSMRGAPYDFRKAPNENQEYFANFKALIEETYDLNGGT-PVVLVAHSMGSLMCLYFLQRQSSAWK 166 (283)
Q Consensus 89 ~l~~~L~~~g~-~~~~d~~g~g~~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~-~v~lvgHSmGg~va~~~~~~~~~~~~ 166 (283)
.+--.|. .|+ ||.+.++-.+ .+..+..+.......+++.+.+.++.. |++|||-+.||-.++.+++..|+.
T Consensus 92 evG~AL~-~GHPvYFV~F~p~P----~pgQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~-- 164 (581)
T PF11339_consen 92 EVGVALR-AGHPVYFVGFFPEP----EPGQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDL-- 164 (581)
T ss_pred HHHHHHH-cCCCeEEEEecCCC----CCCCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCc--
Confidence 4445554 477 6554333222 122356677777788999998888765 899999999999999999999997
Q ss_pred hhhhcceEEecCC
Q psy4395 167 SKFVRSLVSLAAP 179 (283)
Q Consensus 167 ~~~v~~~i~i~~p 179 (283)
+.-+|+-++|
T Consensus 165 ---~gplvlaGaP 174 (581)
T PF11339_consen 165 ---VGPLVLAGAP 174 (581)
T ss_pred ---cCceeecCCC
Confidence 8888887777
No 436
>KOG4279|consensus
Probab=95.83 E-value=0.0038 Score=58.53 Aligned_cols=51 Identities=27% Similarity=0.541 Sum_probs=43.0
Q ss_pred eecccCCeeEEEEEEcCCCcEEEEEeechHH----------H-HHhcCCCcceeeeEEEEEC
Q psy4395 231 PLGTGKFGHVYLAKEKTTQIMIALKVLYKVE----------I-INERMTHQGMILAFTCYRN 281 (283)
Q Consensus 231 ~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~----------~-~~~~~~h~~iv~l~~~~~~ 281 (283)
.+|+|.||+||-++++.|+...|+|.|.... + ....+.|.|||++++++..
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~se 643 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSE 643 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCC
Confidence 7899999999999999999999999997542 1 2237899999999998754
No 437
>KOG2565|consensus
Probab=95.83 E-value=0.069 Score=46.59 Aligned_cols=70 Identities=11% Similarity=0.022 Sum_probs=52.1
Q ss_pred c-ccCCCcCcCCCCCCCCCCcchHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCChhHHhhhhcceEE
Q psy4395 99 Y-QRDLSMRGAPYDFRKAPNENQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSSAWKSKFVRSLVS 175 (283)
Q Consensus 99 ~-~~~~d~~g~g~~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~~~~~~~~v~~~i~ 175 (283)
| |+++.++|+|.|...+..... ....+.++..+.-+.+-.+..|-|--+|+.|+-.++..+|+. |.++-+
T Consensus 189 FEVI~PSlPGygwSd~~sk~GFn--~~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPen-----V~GlHl 259 (469)
T KOG2565|consen 189 FEVIAPSLPGYGWSDAPSKTGFN--AAATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPEN-----VLGLHL 259 (469)
T ss_pred EEEeccCCCCcccCcCCccCCcc--HHHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcchh-----hhHhhh
Confidence 5 789999999977654443333 234455666665556667999999999999999999999997 777543
No 438
>PLN02719 triacylglycerol lipase
Probab=95.77 E-value=0.018 Score=52.51 Aligned_cols=62 Identities=13% Similarity=0.184 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHHcCC-----CCEEEEEeCcccHHHHHHHHcCChh-------HHhhhhcceEEecCCCCcchh
Q psy4395 123 FANFKALIEETYDLNGG-----TPVVLVAHSMGSLMCLYFLQRQSSA-------WKSKFVRSLVSLAAPWGGSVK 185 (283)
Q Consensus 123 ~~~l~~~i~~~~~~~~~-----~~v~lvgHSmGg~va~~~~~~~~~~-------~~~~~v~~~i~i~~p~~g~~~ 185 (283)
.+++.+.|..+.+.++. .+|.+.||||||.+|..++...-.. .+...|. +++.++|-.|...
T Consensus 276 ReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~Dl~~~gln~~~~~~~~pVt-vyTFGsPRVGN~~ 349 (518)
T PLN02719 276 REQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDVAEMGLNRTRKGKVIPVT-AFTYGGPRVGNIR 349 (518)
T ss_pred HHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHHHHHhcccccccccccceE-EEEecCCCccCHH
Confidence 34455566666655542 3799999999999998876542111 0011133 6788999888654
No 439
>KOG0984|consensus
Probab=95.75 E-value=0.0065 Score=48.79 Aligned_cols=60 Identities=17% Similarity=0.156 Sum_probs=48.5
Q ss_pred cCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH-------------HHHhcCCCcceeeeEEEEECC
Q psy4395 223 MSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE-------------IINERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 223 ~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~-------------~~~~~~~h~~iv~l~~~~~~~ 282 (283)
.+++.-+..+|+|++|.|-+.++..+|+..|+|.|...- +.+.....|++|++|+.+-++
T Consensus 45 ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~re 117 (282)
T KOG0984|consen 45 ADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFRE 117 (282)
T ss_pred hhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhcc
Confidence 356666778999999999999999999999999997531 233467899999999976543
No 440
>COG0400 Predicted esterase [General function prediction only]
Probab=95.75 E-value=0.02 Score=46.45 Aligned_cols=52 Identities=13% Similarity=0.188 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHHHHcCC--CCEEEEEeCcccHHHHHHHHcCChhHHhhhhcceEEecC
Q psy4395 122 YFANFKALIEETYDLNGG--TPVVLVAHSMGSLMCLYFLQRQSSAWKSKFVRSLVSLAA 178 (283)
Q Consensus 122 ~~~~l~~~i~~~~~~~~~--~~v~lvgHSmGg~va~~~~~~~~~~~~~~~v~~~i~i~~ 178 (283)
-.+.+.+.++...++++. .+++++|+|-|+.++++.+..+|.. ++++|++++
T Consensus 79 ~~~~~~~~l~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~-----~~~ail~~g 132 (207)
T COG0400 79 ETEKLAEFLEELAEEYGIDSSRIILIGFSQGANIALSLGLTLPGL-----FAGAILFSG 132 (207)
T ss_pred HHHHHHHHHHHHHHHhCCChhheEEEecChHHHHHHHHHHhCchh-----hccchhcCC
Confidence 345566677776666654 6899999999999999999999987 788887754
No 441
>KOG3653|consensus
Probab=95.74 E-value=0.006 Score=54.53 Aligned_cols=55 Identities=24% Similarity=0.408 Sum_probs=42.9
Q ss_pred cCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHHH---HHh-------cCCCcceeeeEEEE
Q psy4395 223 MSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI---INE-------RMTHQGMILAFTCY 279 (283)
Q Consensus 223 ~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~---~~~-------~~~h~~iv~l~~~~ 279 (283)
.....+...+++|.||.|++++.. ++.||||++..... ..+ .+.|+||++++++-
T Consensus 209 l~pl~l~eli~~Grfg~V~KaqL~--~~~VAVKifp~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~e 273 (534)
T KOG3653|consen 209 LDPLQLLELIGRGRFGCVWKAQLD--NRLVAVKIFPEQEKQSFQNEKNIYSLPGMKHENILQFIGAE 273 (534)
T ss_pred CCchhhHHHhhcCccceeehhhcc--CceeEEEecCHHHHHHHHhHHHHHhccCccchhHHHhhchh
Confidence 445666778899999999999875 48999999986542 222 68999999987753
No 442
>PRK04940 hypothetical protein; Provisional
Probab=95.69 E-value=0.03 Score=44.20 Aligned_cols=49 Identities=8% Similarity=0.094 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCChhHHhhhhcceEEecCCC
Q psy4395 124 ANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSSAWKSKFVRSLVSLAAPW 180 (283)
Q Consensus 124 ~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~~~~~~~~v~~~i~i~~p~ 180 (283)
+.+.+.|+.+......+++.|||+||||..|.+++.++. ++ .|++.|..
T Consensus 44 ~~l~~~i~~~~~~~~~~~~~liGSSLGGyyA~~La~~~g-------~~-aVLiNPAv 92 (180)
T PRK04940 44 QHLLKEVDKMLQLSDDERPLICGVGLGGYWAERIGFLCG-------IR-QVIFNPNL 92 (180)
T ss_pred HHHHHHHHHhhhccCCCCcEEEEeChHHHHHHHHHHHHC-------CC-EEEECCCC
Confidence 344445544322111247999999999999999998875 33 46576644
No 443
>KOG3975|consensus
Probab=95.67 E-value=0.1 Score=43.15 Aligned_cols=90 Identities=17% Similarity=0.161 Sum_probs=49.0
Q ss_pred cchHHHHHHHHHhCCc----ccCCCcCcCCC---CCCCCCC----cchHHHHHHHHHHHHHHHHcC-CCCEEEEEeCccc
Q psy4395 84 GSYFSYIAAALVGLGY----QRDLSMRGAPY---DFRKAPN----ENQEYFANFKALIEETYDLNG-GTPVVLVAHSMGS 151 (283)
Q Consensus 84 ~~~~~~l~~~L~~~g~----~~~~d~~g~g~---~~r~~~~----~~~~~~~~l~~~i~~~~~~~~-~~~v~lvgHSmGg 151 (283)
.+||..+++.|...-. ++.+...||.. +.|-+.. +.-...+++.-.++-+++..+ +.+++++|||.|+
T Consensus 42 ~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~~~Pk~~ki~iiGHSiGa 121 (301)
T KOG3975|consen 42 LGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKEYVPKDRKIYIIGHSIGA 121 (301)
T ss_pred hhHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHHhCCCCCEEEEEecchhH
Confidence 3467777777765322 44444444431 1121111 111222344444554544433 4689999999999
Q ss_pred HHHHHHHHcCChhHHhhhhcceEEe
Q psy4395 152 LMCLYFLQRQSSAWKSKFVRSLVSL 176 (283)
Q Consensus 152 ~va~~~~~~~~~~~~~~~v~~~i~i 176 (283)
.+.+..+....... +|++.+++
T Consensus 122 Ym~Lqil~~~k~~~---~vqKa~~L 143 (301)
T KOG3975|consen 122 YMVLQILPSIKLVF---SVQKAVLL 143 (301)
T ss_pred HHHHHHhhhccccc---ceEEEEEe
Confidence 99999887532221 36666655
No 444
>KOG4372|consensus
Probab=95.64 E-value=0.005 Score=54.10 Aligned_cols=44 Identities=23% Similarity=0.360 Sum_probs=30.0
Q ss_pred CCEEEEEeCcccHHHHHHHHc----CChhHHhhhhcceEEecCCCCcc
Q psy4395 140 TPVVLVAHSMGSLMCLYFLQR----QSSAWKSKFVRSLVSLAAPWGGS 183 (283)
Q Consensus 140 ~~v~lvgHSmGg~va~~~~~~----~~~~~~~~~v~~~i~i~~p~~g~ 183 (283)
.++..||||+||++++++... .++...+-.+..++++++|..|.
T Consensus 150 ~kISfvghSLGGLvar~AIgyly~~~~~~f~~v~p~~fitlasp~~gI 197 (405)
T KOG4372|consen 150 EKISFVGHSLGGLVARYAIGYLYEKAPDFFSDVEPVNFITLASPKLGI 197 (405)
T ss_pred ceeeeeeeecCCeeeeEEEEeecccccccccccCcchhhhhcCCCccc
Confidence 489999999999999887554 23322222234677778887663
No 445
>KOG1345|consensus
Probab=95.63 E-value=0.0029 Score=52.75 Aligned_cols=58 Identities=24% Similarity=0.519 Sum_probs=46.7
Q ss_pred CceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHHH-----HHh------cCCCcceeeeEE-EEEC
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI-----INE------RMTHQGMILAFT-CYRN 281 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~-----~~~------~~~h~~iv~l~~-~~~~ 281 (283)
+.|.+.+.+|.|-||.+.+++++.+.+.+++|.+.+... -++ --.|.|||.-|+ +||+
T Consensus 24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt 93 (378)
T KOG1345|consen 24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQT 93 (378)
T ss_pred hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeeccchhhhHHHHHHhhc
Confidence 578889999999999999999999999999999987532 222 235999998776 4554
No 446
>KOG3043|consensus
Probab=95.61 E-value=0.021 Score=46.31 Aligned_cols=85 Identities=11% Similarity=0.101 Sum_probs=60.4
Q ss_pred HHHHHHHHhCCc-ccCCCcCc-CCCCCCCCC---------CcchHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHH
Q psy4395 88 SYIAAALVGLGY-QRDLSMRG-APYDFRKAP---------NENQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLY 156 (283)
Q Consensus 88 ~~l~~~L~~~g~-~~~~d~~g-~g~~~r~~~---------~~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~ 156 (283)
+..++.++.+|| ++.+|+.. -+++-.... .+......++.++++.+.++...+++=++|.+|||.++..
T Consensus 57 r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g~~kkIGv~GfCwGak~vv~ 136 (242)
T KOG3043|consen 57 REGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHGDSKKIGVVGFCWGAKVVVT 136 (242)
T ss_pred HHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcCCcceeeEEEEeecceEEEE
Confidence 478899999999 89999754 222211000 1234455678899999987655779999999999999988
Q ss_pred HHHcCChhHHhhhhcceEEecC
Q psy4395 157 FLQRQSSAWKSKFVRSLVSLAA 178 (283)
Q Consensus 157 ~~~~~~~~~~~~~v~~~i~i~~ 178 (283)
+....|. +.+.++.-+
T Consensus 137 ~~~~~~~------f~a~v~~hp 152 (242)
T KOG3043|consen 137 LSAKDPE------FDAGVSFHP 152 (242)
T ss_pred eeccchh------heeeeEecC
Confidence 8877764 667666533
No 447
>PLN02761 lipase class 3 family protein
Probab=95.61 E-value=0.024 Score=51.72 Aligned_cols=61 Identities=13% Similarity=0.195 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHc------CCCCEEEEEeCcccHHHHHHHHcCChhH--------HhhhhcceEEecCCCCcchh
Q psy4395 124 ANFKALIEETYDLN------GGTPVVLVAHSMGSLMCLYFLQRQSSAW--------KSKFVRSLVSLAAPWGGSVK 185 (283)
Q Consensus 124 ~~l~~~i~~~~~~~------~~~~v~lvgHSmGg~va~~~~~~~~~~~--------~~~~v~~~i~i~~p~~g~~~ 185 (283)
+++.+.|..+.+.+ +..++++.||||||.+|..++...-... ....| .+++.++|-.|...
T Consensus 272 ~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~DIa~~gln~~~~~~~~~PV-tv~TFGsPRVGN~~ 346 (527)
T PLN02761 272 EQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYDIAELNLNHVPENNYKIPI-TVFSFSGPRVGNLR 346 (527)
T ss_pred HHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHHHHHhccccccccccCCce-EEEEcCCCCcCCHH
Confidence 44555555555555 2246999999999999987764321100 00013 36778899887644
No 448
>KOG4627|consensus
Probab=95.61 E-value=0.021 Score=45.67 Aligned_cols=83 Identities=19% Similarity=0.227 Sum_probs=52.8
Q ss_pred HHHHHHHhCCcccCCCcCcCCCCCCCCCCcchHHHHHHHHHHHHHHHHcCCCCE-EEEEeCcccHHHHHHHHcCChhHHh
Q psy4395 89 YIAAALVGLGYQRDLSMRGAPYDFRKAPNENQEYFANFKALIEETYDLNGGTPV-VLVAHSMGSLMCLYFLQRQSSAWKS 167 (283)
Q Consensus 89 ~l~~~L~~~g~~~~~d~~g~g~~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~v-~lvgHSmGg~va~~~~~~~~~~~~~ 167 (283)
.++..+..+||.++. .||+.-...........++...++-+.+.++..++ .+-|||.|+-++..+..+...
T Consensus 88 siv~~a~~~gY~vas----vgY~l~~q~htL~qt~~~~~~gv~filk~~~n~k~l~~gGHSaGAHLa~qav~R~r~---- 159 (270)
T KOG4627|consen 88 SIVGPAVRRGYRVAS----VGYNLCPQVHTLEQTMTQFTHGVNFILKYTENTKVLTFGGHSAGAHLAAQAVMRQRS---- 159 (270)
T ss_pred chhhhhhhcCeEEEE----eccCcCcccccHHHHHHHHHHHHHHHHHhcccceeEEEcccchHHHHHHHHHHHhcC----
Confidence 345666778883321 23332223335666677777777777777666555 455799999999888776322
Q ss_pred hhhcceEEecCC
Q psy4395 168 KFVRSLVSLAAP 179 (283)
Q Consensus 168 ~~v~~~i~i~~p 179 (283)
+.|.++++.++.
T Consensus 160 prI~gl~l~~Gv 171 (270)
T KOG4627|consen 160 PRIWGLILLCGV 171 (270)
T ss_pred chHHHHHHHhhH
Confidence 249999987654
No 449
>KOG0196|consensus
Probab=95.58 E-value=0.021 Score=54.32 Aligned_cols=59 Identities=22% Similarity=0.309 Sum_probs=46.5
Q ss_pred cCceeeeeeecccCCeeEEEEEEcCCCc---EEEEEeechH-------HHHHh-----cCCCcceeeeEEEEEC
Q psy4395 223 MSDFEVGCPLGTGKFGHVYLAKEKTTQI---MIALKVLYKV-------EIINE-----RMTHQGMILAFTCYRN 281 (283)
Q Consensus 223 ~~~~~~~~~lg~g~fg~v~~~~~~~~~~---~~A~K~i~~~-------~~~~~-----~~~h~~iv~l~~~~~~ 281 (283)
.....+.+.||.|.||.|+..+.+.+|+ .||||.++.- .++.+ .-+|||||+|-++...
T Consensus 628 ~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTk 701 (996)
T KOG0196|consen 628 PSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTK 701 (996)
T ss_pred hhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEec
Confidence 3466778899999999999999998884 6999999742 22222 5689999999998753
No 450
>PLN02847 triacylglycerol lipase
Probab=95.51 E-value=0.021 Score=52.82 Aligned_cols=36 Identities=14% Similarity=0.096 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHH
Q psy4395 124 ANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQ 159 (283)
Q Consensus 124 ~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~ 159 (283)
..+...|..+.+.+++-+++++||||||.+|..++.
T Consensus 235 ~~i~~~L~kal~~~PdYkLVITGHSLGGGVAALLAi 270 (633)
T PLN02847 235 KLSTPCLLKALDEYPDFKIKIVGHSLGGGTAALLTY 270 (633)
T ss_pred HHHHHHHHHHHHHCCCCeEEEeccChHHHHHHHHHH
Confidence 344455556666778789999999999999866543
No 451
>KOG0579|consensus
Probab=95.49 E-value=0.00066 Score=62.74 Aligned_cols=56 Identities=30% Similarity=0.502 Sum_probs=45.1
Q ss_pred CceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH---H--------HHhcCCCcceeeeEEEE
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE---I--------INERMTHQGMILAFTCY 279 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~---~--------~~~~~~h~~iv~l~~~~ 279 (283)
+.+.++..+|.|+||.||.|..+.++.+.|.|+|.-.. + +.-..+||+||+|+++|
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ay 98 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAY 98 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHH
Confidence 45778889999999999999999999999999997421 1 11256799999999865
No 452
>KOG4569|consensus
Probab=95.46 E-value=0.029 Score=49.28 Aligned_cols=61 Identities=13% Similarity=0.190 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCChh-HHhhhhcceEEecCCCCcch
Q psy4395 124 ANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSSA-WKSKFVRSLVSLAAPWGGSV 184 (283)
Q Consensus 124 ~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~~~-~~~~~v~~~i~i~~p~~g~~ 184 (283)
..+.+.++.+...+++-.|.+-||||||.+|..++...-.. ......-++++.+.|-.|..
T Consensus 155 ~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~i~~~~~~~~~~v~v~tFG~PRvGn~ 216 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALDLVKNGLKTSSPVKVYTFGQPRVGNL 216 (336)
T ss_pred HHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHHHHHcCCCCCCceEEEEecCCCcccH
Confidence 45667777777777788999999999999998776651110 00111346888899977753
No 453
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=95.43 E-value=0.015 Score=47.54 Aligned_cols=49 Identities=14% Similarity=0.232 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHc--CCCCEEEEEeCcccHHHHHHHHcCChhHHhhhhcceEEecCCC
Q psy4395 126 FKALIEETYDLN--GGTPVVLVAHSMGSLMCLYFLQRQSSAWKSKFVRSLVSLAAPW 180 (283)
Q Consensus 126 l~~~i~~~~~~~--~~~~v~lvgHSmGg~va~~~~~~~~~~~~~~~v~~~i~i~~p~ 180 (283)
+.++|+.+.++- ...+|.|+|.|.||-+|+.++..+|+ |+++|+++++.
T Consensus 6 fe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~~------i~avVa~~ps~ 56 (213)
T PF08840_consen 6 FEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFPQ------ISAVVAISPSS 56 (213)
T ss_dssp HHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSSS------EEEEEEES--S
T ss_pred HHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCCC------ccEEEEeCCce
Confidence 445555555431 22489999999999999999999995 99999987653
No 454
>COG3150 Predicted esterase [General function prediction only]
Probab=95.43 E-value=0.031 Score=43.16 Aligned_cols=54 Identities=17% Similarity=0.266 Sum_probs=33.6
Q ss_pred cCcCCCCCCCCCCcchHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCC
Q psy4395 105 MRGAPYDFRKAPNENQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQS 162 (283)
Q Consensus 105 ~~g~g~~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~ 162 (283)
.+...|+....+......+ +.++.+.++.+++...|+|-|+||..|-....++.
T Consensus 28 ~~~i~y~~p~l~h~p~~a~----~ele~~i~~~~~~~p~ivGssLGGY~At~l~~~~G 81 (191)
T COG3150 28 VRDIEYSTPHLPHDPQQAL----KELEKAVQELGDESPLIVGSSLGGYYATWLGFLCG 81 (191)
T ss_pred ccceeeecCCCCCCHHHHH----HHHHHHHHHcCCCCceEEeecchHHHHHHHHHHhC
Confidence 3444444333333333333 44444455555556899999999999988887765
No 455
>KOG2183|consensus
Probab=95.37 E-value=0.044 Score=48.41 Aligned_cols=90 Identities=16% Similarity=0.154 Sum_probs=60.1
Q ss_pred cchHHHHHHHHHhCCcccCCCcCcCCCCCCCCC-----------CcchHHHHHHHHHHHHHHHHc--CCCCEEEEEeCcc
Q psy4395 84 GSYFSYIAAALVGLGYQRDLSMRGAPYDFRKAP-----------NENQEYFANFKALIEETYDLN--GGTPVVLVAHSMG 150 (283)
Q Consensus 84 ~~~~~~l~~~L~~~g~~~~~d~~g~g~~~r~~~-----------~~~~~~~~~l~~~i~~~~~~~--~~~~v~lvgHSmG 150 (283)
.+++.++++.|.. .++-..+|=+|.+.-... .+.+...+|.+.+|..++++. ...||+.+|-|.|
T Consensus 100 tGFm~D~Ap~~~A--llVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~~~~a~~~pvIafGGSYG 177 (492)
T KOG2183|consen 100 TGFMWDLAPELKA--LLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKRDLSAEASPVIAFGGSYG 177 (492)
T ss_pred cchHHhhhHhhCc--eEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHhhccccccCcEEEecCchh
Confidence 3456677777754 222234555554321111 124556677788888877653 3459999999999
Q ss_pred cHHHHHHHHcCChhHHhhhhcceEEecCCC
Q psy4395 151 SLMCLYFLQRQSSAWKSKFVRSLVSLAAPW 180 (283)
Q Consensus 151 g~va~~~~~~~~~~~~~~~v~~~i~i~~p~ 180 (283)
|+++..|=.++|.. |.+.+.-++|.
T Consensus 178 GMLaAWfRlKYPHi-----v~GAlAaSAPv 202 (492)
T KOG2183|consen 178 GMLAAWFRLKYPHI-----VLGALAASAPV 202 (492)
T ss_pred hHHHHHHHhcChhh-----hhhhhhccCce
Confidence 99999999999987 77777777773
No 456
>KOG4278|consensus
Probab=95.32 E-value=0.0082 Score=55.69 Aligned_cols=57 Identities=21% Similarity=0.376 Sum_probs=47.7
Q ss_pred CceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHHHH----------HhcCCCcceeeeEEEEE
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEII----------NERMTHQGMILAFTCYR 280 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~~----------~~~~~h~~iv~l~~~~~ 280 (283)
.+..+...+|.|.||.||....+.....+|+|.++.+.+. ...+.|||+|+|+++-.
T Consensus 267 tdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHpNLVqLLGVCT 333 (1157)
T KOG4278|consen 267 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 333 (1157)
T ss_pred hheeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCccHHHHhhhhc
Confidence 4677788999999999999999999999999999876432 23689999999998644
No 457
>KOG0603|consensus
Probab=95.29 E-value=0.013 Score=54.10 Aligned_cols=61 Identities=21% Similarity=0.279 Sum_probs=51.9
Q ss_pred ccCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH--------HHHhcCCCcceeeeEEEEECC
Q psy4395 222 QMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE--------IINERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 222 ~~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~--------~~~~~~~h~~iv~l~~~~~~~ 282 (283)
..++|.+...+|.|+|+.|..+.++.+++.+++|++.+.. +.....+||||+++++++++.
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~~~~~e~~~~~~~~~h~niv~~~~v~~~~ 388 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRADDNQDEIPISLLVRDHPNIVKSHDVYEDG 388 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheeccccccccccccchhhhhcCCCcceeecceecCC
Confidence 3567888888999999999999999999999999999862 334456899999999998875
No 458
>KOG1025|consensus
Probab=95.23 E-value=0.015 Score=55.68 Aligned_cols=55 Identities=27% Similarity=0.452 Sum_probs=41.6
Q ss_pred eeeeeeecccCCeeEEEEEEcCCC----cEEEEEeechH-------HHHHh-----cCCCcceeeeEEEEE
Q psy4395 226 FEVGCPLGTGKFGHVYLAKEKTTQ----IMIALKVLYKV-------EIINE-----RMTHQGMILAFTCYR 280 (283)
Q Consensus 226 ~~~~~~lg~g~fg~v~~~~~~~~~----~~~A~K~i~~~-------~~~~~-----~~~h~~iv~l~~~~~ 280 (283)
+...+.+|.|+||+||..-....| ..||+|++... ++.++ +++|||+++|+++-.
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~ 768 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCM 768 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcc
Confidence 444678999999999988876555 36899998753 22332 799999999998644
No 459
>KOG1163|consensus
Probab=95.22 E-value=0.032 Score=46.02 Aligned_cols=39 Identities=23% Similarity=0.396 Sum_probs=35.1
Q ss_pred ccCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechH
Q psy4395 222 QMSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKV 260 (283)
Q Consensus 222 ~~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~ 260 (283)
....|.+++.||.|+||-+|++....+|..||+|+=+..
T Consensus 13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~ 51 (341)
T KOG1163|consen 13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSK 51 (341)
T ss_pred eccceEEEEeecCCchhheeeeeeccCCceEEEEeeccc
Confidence 456899999999999999999999999999999987654
No 460
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=95.16 E-value=0.18 Score=42.84 Aligned_cols=55 Identities=15% Similarity=0.123 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHHHHHcCCC--CEEEEEeCcccHHHHHHHHcCChhHHhhhhcceEEecCCC
Q psy4395 121 EYFANFKALIEETYDLNGGT--PVVLVAHSMGSLMCLYFLQRQSSAWKSKFVRSLVSLAAPW 180 (283)
Q Consensus 121 ~~~~~l~~~i~~~~~~~~~~--~v~lvgHSmGg~va~~~~~~~~~~~~~~~v~~~i~i~~p~ 180 (283)
+-+..|.++++.+..+++-. .|++.|-|-||.++..++..+|+. ..++-.+++..
T Consensus 123 ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~-----faa~A~VAg~~ 179 (312)
T COG3509 123 DDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDI-----FAAIAPVAGLL 179 (312)
T ss_pred cHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCccc-----ccceeeeeccc
Confidence 34566888888888887544 799999999999999999999987 55555554433
No 461
>KOG2281|consensus
Probab=95.06 E-value=0.027 Score=52.32 Aligned_cols=73 Identities=21% Similarity=0.224 Sum_probs=51.2
Q ss_pred HHHHHhCCc-ccCCCcCcCC-CCCC--------CCCCcchHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHc
Q psy4395 91 AAALVGLGY-QRDLSMRGAP-YDFR--------KAPNENQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQR 160 (283)
Q Consensus 91 ~~~L~~~g~-~~~~d~~g~g-~~~r--------~~~~~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~ 160 (283)
...|+..|| |+.+|.||.- +.-+ ..--+.++-++-++-++|+..-. .-..|.+-|+|.||.+++..+.+
T Consensus 669 ~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq~gfi-dmdrV~vhGWSYGGYLSlm~L~~ 747 (867)
T KOG2281|consen 669 FCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQTGFI-DMDRVGVHGWSYGGYLSLMGLAQ 747 (867)
T ss_pred hhhhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHHhcCcc-cchheeEeccccccHHHHHHhhc
Confidence 467889999 8899999953 1111 11113566666677777665211 11379999999999999999999
Q ss_pred CChh
Q psy4395 161 QSSA 164 (283)
Q Consensus 161 ~~~~ 164 (283)
+|+.
T Consensus 748 ~P~I 751 (867)
T KOG2281|consen 748 YPNI 751 (867)
T ss_pred Ccce
Confidence 9985
No 462
>KOG0604|consensus
Probab=95.05 E-value=0.0047 Score=52.24 Aligned_cols=60 Identities=28% Similarity=0.327 Sum_probs=47.9
Q ss_pred cCceeee-eeecccCCeeEEEEEEcCCCcEEEEEeechHHHH-------HhcCCCcceeeeEEEEECC
Q psy4395 223 MSDFEVG-CPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEII-------NERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 223 ~~~~~~~-~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~~-------~~~~~h~~iv~l~~~~~~~ 282 (283)
.+||.+- ..+|-|--|.|..+.++.||+.+|+|++.-..-. -..-.|||||+++++|++-
T Consensus 60 tedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~KARrEVeLHw~~s~h~~iV~IidVyeNs 127 (400)
T KOG0604|consen 60 TEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDSPKARREVELHWMASGHPHIVSIIDVYENS 127 (400)
T ss_pred hhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcCHHHHhHhhhhhhhcCCCceEEeehhhhhh
Confidence 4567763 4789999999999999999999999999743222 2256799999999999863
No 463
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=94.99 E-value=0.089 Score=45.58 Aligned_cols=84 Identities=12% Similarity=0.058 Sum_probs=52.0
Q ss_pred HHHHHHHHhCCc-ccCCCcCcCCCCCCCCCCcchHHHHHHHHHHHHHHHHc-----CCCCEEEEEeCcccHHHHHHHHcC
Q psy4395 88 SYIAAALVGLGY-QRDLSMRGAPYDFRKAPNENQEYFANFKALIEETYDLN-----GGTPVVLVAHSMGSLMCLYFLQRQ 161 (283)
Q Consensus 88 ~~l~~~L~~~g~-~~~~d~~g~g~~~r~~~~~~~~~~~~l~~~i~~~~~~~-----~~~~v~lvgHSmGg~va~~~~~~~ 161 (283)
..+...+...|+ ++.+|+|-.+.. .+...++|+.+.+..+.++. ..++|.+.|||-||.++..++...
T Consensus 100 ~~~~~~~~~~g~~vv~vdYrlaPe~------~~p~~~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~ 173 (312)
T COG0657 100 ALVARLAAAAGAVVVSVDYRLAPEH------PFPAALEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAA 173 (312)
T ss_pred HHHHHHHHHcCCEEEecCCCCCCCC------CCCchHHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHH
Confidence 345555567999 889988776633 23334455555555555432 145899999999999998887763
Q ss_pred ChhHHhhhhcceEEecC
Q psy4395 162 SSAWKSKFVRSLVSLAA 178 (283)
Q Consensus 162 ~~~~~~~~v~~~i~i~~ 178 (283)
.+. ........+++.+
T Consensus 174 ~~~-~~~~p~~~~li~P 189 (312)
T COG0657 174 RDR-GLPLPAAQVLISP 189 (312)
T ss_pred Hhc-CCCCceEEEEEec
Confidence 321 0112456666644
No 464
>KOG0599|consensus
Probab=94.79 E-value=0.012 Score=49.36 Aligned_cols=58 Identities=24% Similarity=0.227 Sum_probs=47.0
Q ss_pred ceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechH--------------------HHHHhcCCCcceeeeEEEEECC
Q psy4395 225 DFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKV--------------------EIINERMTHQGMILAFTCYRNP 282 (283)
Q Consensus 225 ~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~--------------------~~~~~~~~h~~iv~l~~~~~~~ 282 (283)
.|.-...+|.|..+.|..+-++.+|..+|+|+|.-. .+.++-+.||+||+|.++||++
T Consensus 18 ~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~ 95 (411)
T KOG0599|consen 18 KYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESD 95 (411)
T ss_pred hcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCc
Confidence 344456788999999999999999999999998632 2345567899999999999987
No 465
>KOG4540|consensus
Probab=94.73 E-value=0.061 Score=45.21 Aligned_cols=45 Identities=13% Similarity=0.211 Sum_probs=35.8
Q ss_pred chHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCCh
Q psy4395 119 NQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSS 163 (283)
Q Consensus 119 ~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~~ 163 (283)
.+.++.+..+++..+++.++...+.+-|||+||.+|..+-..+.-
T Consensus 255 ~dryySa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fgl 299 (425)
T KOG4540|consen 255 FDRYYSAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFGL 299 (425)
T ss_pred hcchhHHHHHHHHHHHHhCCCceEEEeccccchHHHHHhccccCC
Confidence 345666677777788888998899999999999999877666543
No 466
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=94.73 E-value=0.061 Score=45.21 Aligned_cols=45 Identities=13% Similarity=0.211 Sum_probs=35.8
Q ss_pred chHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCCh
Q psy4395 119 NQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSS 163 (283)
Q Consensus 119 ~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~~ 163 (283)
.+.++.+..+++..+++.++...+.+-|||+||.+|..+-..+.-
T Consensus 255 ~dryySa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fgl 299 (425)
T COG5153 255 FDRYYSAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFGL 299 (425)
T ss_pred hcchhHHHHHHHHHHHHhCCCceEEEeccccchHHHHHhccccCC
Confidence 345666677777788888998899999999999999877666543
No 467
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=94.38 E-value=0.073 Score=50.22 Aligned_cols=40 Identities=33% Similarity=0.448 Sum_probs=35.8
Q ss_pred ccccCceeeeeeecccCCeeEEEEEEcCC----CcEEEEEeech
Q psy4395 220 RWQMSDFEVGCPLGTGKFGHVYLAKEKTT----QIMIALKVLYK 259 (283)
Q Consensus 220 ~~~~~~~~~~~~lg~g~fg~v~~~~~~~~----~~~~A~K~i~~ 259 (283)
.+..++|.+.+.+|+|+||.||+++...+ +..||+|.+..
T Consensus 128 ~~~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~ 171 (566)
T PLN03225 128 SFKKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATE 171 (566)
T ss_pred CCccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecc
Confidence 44567999999999999999999999998 89999998864
No 468
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=94.33 E-value=0.2 Score=41.37 Aligned_cols=74 Identities=14% Similarity=0.015 Sum_probs=46.8
Q ss_pred HHHHHHHHHhCCc-ccCCCcCcC-CCCCC-CCCCcchHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcC
Q psy4395 87 FSYIAAALVGLGY-QRDLSMRGA-PYDFR-KAPNENQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQ 161 (283)
Q Consensus 87 ~~~l~~~L~~~g~-~~~~d~~g~-g~~~r-~~~~~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~ 161 (283)
|..++.+|..+|| |+.+|..-| |.+.. ...-+...-.++|..+++.+. ..+...+-||+-|+-|-+|...+.+.
T Consensus 46 ~agLA~YL~~NGFhViRyDsl~HvGlSsG~I~eftms~g~~sL~~V~dwl~-~~g~~~~GLIAaSLSaRIAy~Va~~i 122 (294)
T PF02273_consen 46 FAGLAEYLSANGFHVIRYDSLNHVGLSSGDINEFTMSIGKASLLTVIDWLA-TRGIRRIGLIAASLSARIAYEVAADI 122 (294)
T ss_dssp GHHHHHHHHTTT--EEEE---B-------------HHHHHHHHHHHHHHHH-HTT---EEEEEETTHHHHHHHHTTTS
T ss_pred HHHHHHHHhhCCeEEEeccccccccCCCCChhhcchHHhHHHHHHHHHHHH-hcCCCcchhhhhhhhHHHHHHHhhcc
Confidence 6699999999999 888886654 43321 111134455677888888887 45667899999999999999998854
No 469
>KOG4645|consensus
Probab=94.32 E-value=0.014 Score=58.36 Aligned_cols=55 Identities=24% Similarity=0.386 Sum_probs=44.4
Q ss_pred eeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH-------------HHHhcCCCcceeeeEEEEE
Q psy4395 226 FEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE-------------IINERMTHQGMILAFTCYR 280 (283)
Q Consensus 226 ~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~-------------~~~~~~~h~~iv~l~~~~~ 280 (283)
+.....+|.|.||.||-+-...+|...|+|.|.-.. -..+.+.|||+|++|++--
T Consensus 1237 Wqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEv 1304 (1509)
T KOG4645|consen 1237 WQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEV 1304 (1509)
T ss_pred eccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceee
Confidence 334558899999999999999999999999886532 1345789999999998743
No 470
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=94.25 E-value=0.077 Score=49.23 Aligned_cols=41 Identities=27% Similarity=0.480 Sum_probs=32.7
Q ss_pred cccccCceeeeeeecccCCeeEEEEEEc----------------CCCcEEEEEeech
Q psy4395 219 YRWQMSDFEVGCPLGTGKFGHVYLAKEK----------------TTQIMIALKVLYK 259 (283)
Q Consensus 219 ~~~~~~~~~~~~~lg~g~fg~v~~~~~~----------------~~~~~~A~K~i~~ 259 (283)
.++..++|.+.+.||+|+||.||++... ..++.||+|.+..
T Consensus 140 ~r~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~ 196 (507)
T PLN03224 140 SRWSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNM 196 (507)
T ss_pred CCccccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecc
Confidence 3456789999999999999999988642 2346799999863
No 471
>COG0627 Predicted esterase [General function prediction only]
Probab=94.14 E-value=0.061 Score=46.64 Aligned_cols=50 Identities=22% Similarity=0.349 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHcCC-CCEEEEEeCcccHHHHHHHHcCChhHHhhhhcceEEecC
Q psy4395 124 ANFKALIEETYDLNGG-TPVVLVAHSMGSLMCLYFLQRQSSAWKSKFVRSLVSLAA 178 (283)
Q Consensus 124 ~~l~~~i~~~~~~~~~-~~v~lvgHSmGg~va~~~~~~~~~~~~~~~v~~~i~i~~ 178 (283)
++|...+++....... ..-.|+||||||.=|+.++..+|+. ...+..+++
T Consensus 135 ~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~-----f~~~sS~Sg 185 (316)
T COG0627 135 QELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDR-----FKSASSFSG 185 (316)
T ss_pred hhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcch-----hceeccccc
Confidence 3455555544332211 2678999999999999999999986 455444443
No 472
>KOG3967|consensus
Probab=93.75 E-value=0.27 Score=39.67 Aligned_cols=44 Identities=27% Similarity=0.336 Sum_probs=33.2
Q ss_pred CCCEEEEEeCcccHHHHHHHHcCChhHHhhhhcceEEecCCCCcchhh
Q psy4395 139 GTPVVLVAHSMGSLMCLYFLQRQSSAWKSKFVRSLVSLAAPWGGSVKA 186 (283)
Q Consensus 139 ~~~v~lvgHSmGg~va~~~~~~~~~~~~~~~v~~~i~i~~p~~g~~~~ 186 (283)
...|.+|+||.||..++.++.+.|+. ..|.++-+..++ .|++.+
T Consensus 189 ~~sv~vvahsyGG~~t~~l~~~f~~d---~~v~aialTDs~-~~~p~a 232 (297)
T KOG3967|consen 189 AESVFVVAHSYGGSLTLDLVERFPDD---ESVFAIALTDSA-MGSPQA 232 (297)
T ss_pred cceEEEEEeccCChhHHHHHHhcCCc---cceEEEEeeccc-ccCchh
Confidence 34799999999999999999998874 336665555565 566554
No 473
>KOG2931|consensus
Probab=93.67 E-value=0.3 Score=41.38 Aligned_cols=78 Identities=12% Similarity=0.127 Sum_probs=54.7
Q ss_pred HHHHHhCCc-ccCCCcCcCCCCC-----CCCCCcchHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCChh
Q psy4395 91 AAALVGLGY-QRDLSMRGAPYDF-----RKAPNENQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSSA 164 (283)
Q Consensus 91 ~~~L~~~g~-~~~~d~~g~g~~~-----r~~~~~~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~~~ 164 (283)
+..+.++ + ++-+|.+|+-.+- .....+.++.++++..+++. .+-+-|+-+|---|+.|...||..+|++
T Consensus 72 m~ei~~~-fcv~HV~~PGqe~gAp~~p~~y~yPsmd~LAd~l~~VL~~----f~lk~vIg~GvGAGAyIL~rFAl~hp~r 146 (326)
T KOG2931|consen 72 MAEILEH-FCVYHVDAPGQEDGAPSFPEGYPYPSMDDLADMLPEVLDH----FGLKSVIGMGVGAGAYILARFALNHPER 146 (326)
T ss_pred HHHHHhh-eEEEecCCCccccCCccCCCCCCCCCHHHHHHHHHHHHHh----cCcceEEEecccccHHHHHHHHhcChhh
Confidence 3445555 6 7888999974321 11123455555555555554 4445799999999999999999999998
Q ss_pred HHhhhhcceEEecC
Q psy4395 165 WKSKFVRSLVSLAA 178 (283)
Q Consensus 165 ~~~~~v~~~i~i~~ 178 (283)
|-++|+|.+
T Consensus 147 -----V~GLvLIn~ 155 (326)
T KOG2931|consen 147 -----VLGLVLINC 155 (326)
T ss_pred -----eeEEEEEec
Confidence 999999964
No 474
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=93.62 E-value=0.31 Score=42.56 Aligned_cols=80 Identities=21% Similarity=0.129 Sum_probs=51.2
Q ss_pred HHHHHHhCCc-ccCCCcCcCCCCCCCCC-------CcchH-------HHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHH
Q psy4395 90 IAAALVGLGY-QRDLSMRGAPYDFRKAP-------NENQE-------YFANFKALIEETYDLNGGTPVVLVAHSMGSLMC 154 (283)
Q Consensus 90 l~~~L~~~g~-~~~~d~~g~g~~~r~~~-------~~~~~-------~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va 154 (283)
++..|.+.|+ .+.+..+=+|. |.+. ....+ .+.+...++..+.++ +..++-+.|-||||.+|
T Consensus 113 ~a~pLl~~gi~s~~le~Pyyg~--RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~Wl~~~-G~~~~g~~G~SmGG~~A 189 (348)
T PF09752_consen 113 MARPLLKEGIASLILENPYYGQ--RKPKDQRRSSLRNVSDLFVMGRATILESRALLHWLERE-GYGPLGLTGISMGGHMA 189 (348)
T ss_pred hhhHHHHcCcceEEEecccccc--cChhHhhcccccchhHHHHHHhHHHHHHHHHHHHHHhc-CCCceEEEEechhHhhH
Confidence 3888888898 55555444442 2222 12222 233444555555555 66699999999999999
Q ss_pred HHHHHcCChhHHhhhhcceEEec
Q psy4395 155 LYFLQRQSSAWKSKFVRSLVSLA 177 (283)
Q Consensus 155 ~~~~~~~~~~~~~~~v~~~i~i~ 177 (283)
...+...|.. |..+-+++
T Consensus 190 ~laa~~~p~p-----v~~vp~ls 207 (348)
T PF09752_consen 190 ALAASNWPRP-----VALVPCLS 207 (348)
T ss_pred HhhhhcCCCc-----eeEEEeec
Confidence 9999988875 66544443
No 475
>PRK10345 hypothetical protein; Provisional
Probab=93.59 E-value=0.16 Score=41.41 Aligned_cols=15 Identities=7% Similarity=0.093 Sum_probs=14.0
Q ss_pred CCcceeeeEEEEECC
Q psy4395 268 THQGMILAFTCYRNP 282 (283)
Q Consensus 268 ~h~~iv~l~~~~~~~ 282 (283)
+||||+++|++++|+
T Consensus 59 ~h~nIvr~yg~~et~ 73 (210)
T PRK10345 59 DWSGIPRYYGTVETD 73 (210)
T ss_pred CCcccceeeEEEEeC
Confidence 789999999999986
No 476
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=93.42 E-value=0.19 Score=42.62 Aligned_cols=82 Identities=12% Similarity=0.186 Sum_probs=48.6
Q ss_pred HHHHhCCc-ccCCCcCcCCCCCCCCCCc-chHHHHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCChhHHhhh
Q psy4395 92 AALVGLGY-QRDLSMRGAPYDFRKAPNE-NQEYFANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSSAWKSKF 169 (283)
Q Consensus 92 ~~L~~~g~-~~~~d~~g~g~~~r~~~~~-~~~~~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~~~~~~~~ 169 (283)
+.+.+ .+ ++-+|.+|+......-+.. .-...++|.+.|..+.+..+-+.|+-+|--.|+.|...|+..+|+.
T Consensus 50 ~~i~~-~f~i~Hi~aPGqe~ga~~~p~~y~yPsmd~LAe~l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~p~~----- 123 (283)
T PF03096_consen 50 QEILQ-NFCIYHIDAPGQEEGAATLPEGYQYPSMDQLAEMLPEVLDHFGLKSVIGFGVGAGANILARFALKHPER----- 123 (283)
T ss_dssp HHHHT-TSEEEEEE-TTTSTT-----TT-----HHHHHCTHHHHHHHHT---EEEEEETHHHHHHHHHHHHSGGG-----
T ss_pred HHHhh-ceEEEEEeCCCCCCCcccccccccccCHHHHHHHHHHHHHhCCccEEEEEeeccchhhhhhccccCccc-----
Confidence 44444 35 6778999986533221111 1223344444444444444556899999999999999999999998
Q ss_pred hcceEEecCC
Q psy4395 170 VRSLVSLAAP 179 (283)
Q Consensus 170 v~~~i~i~~p 179 (283)
|.++|++++-
T Consensus 124 V~GLiLvn~~ 133 (283)
T PF03096_consen 124 VLGLILVNPT 133 (283)
T ss_dssp EEEEEEES--
T ss_pred eeEEEEEecC
Confidence 9999999654
No 477
>KOG4721|consensus
Probab=93.13 E-value=0.066 Score=49.45 Aligned_cols=49 Identities=22% Similarity=0.298 Sum_probs=38.0
Q ss_pred eeeecccCCeeEEEEEEcCCCcEEEEEeechH---HHH-HhcCCCcceeeeEEEE
Q psy4395 229 GCPLGTGKFGHVYLAKEKTTQIMIALKVLYKV---EII-NERMTHQGMILAFTCY 279 (283)
Q Consensus 229 ~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~---~~~-~~~~~h~~iv~l~~~~ 279 (283)
..=+|.|+-|.||+.+.. ++.||||.++.. .|+ .++|.|||||.+.++-
T Consensus 129 LeWlGSGaQGAVF~Grl~--netVAVKKV~elkETdIKHLRkLkH~NII~FkGVC 181 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGRLH--NETVAVKKVRELKETDIKHLRKLKHPNIITFKGVC 181 (904)
T ss_pred hhhhccCcccceeeeecc--CceehhHHHhhhhhhhHHHHHhccCcceeeEeeee
Confidence 345799999999999875 568999988743 233 3589999999998853
No 478
>KOG1515|consensus
Probab=92.86 E-value=0.67 Score=40.61 Aligned_cols=100 Identities=16% Similarity=0.208 Sum_probs=64.1
Q ss_pred ccchHHHHHHHHHh-CCc-ccCCCcCcCCCCCCCCCCcchHHHHHHHHHHHH-HHHHc-CCCCEEEEEeCcccHHHHHHH
Q psy4395 83 VGSYFSYIAAALVG-LGY-QRDLSMRGAPYDFRKAPNENQEYFANFKALIEE-TYDLN-GGTPVVLVAHSMGSLMCLYFL 158 (283)
Q Consensus 83 ~~~~~~~l~~~L~~-~g~-~~~~d~~g~g~~~r~~~~~~~~~~~~l~~~i~~-~~~~~-~~~~v~lvgHSmGg~va~~~~ 158 (283)
...+|+.+...++. .+- ++.+|+|=.+.. + -|...++-.+.+.-+.+. +.+.. .-.+|.|.|=|-||.+|...+
T Consensus 107 ~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh-~-~Pa~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va 184 (336)
T KOG1515|consen 107 NSPAYDSFCTRLAAELNCVVVSVDYRLAPEH-P-FPAAYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVA 184 (336)
T ss_pred CCchhHHHHHHHHHHcCeEEEecCcccCCCC-C-CCccchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHH
Confidence 35678888888864 555 788888877644 2 223455555555555554 22221 234799999999999998887
Q ss_pred HcCChh-HHhhhhcceEEecCCCCcch
Q psy4395 159 QRQSSA-WKSKFVRSLVSLAAPWGGSV 184 (283)
Q Consensus 159 ~~~~~~-~~~~~v~~~i~i~~p~~g~~ 184 (283)
.+.-+. ...-.|++.|++-+-+.|..
T Consensus 185 ~r~~~~~~~~~ki~g~ili~P~~~~~~ 211 (336)
T KOG1515|consen 185 QRAADEKLSKPKIKGQILIYPFFQGTD 211 (336)
T ss_pred HHHhhccCCCcceEEEEEEecccCCCC
Confidence 763321 11234899999976666543
No 479
>KOG2237|consensus
Probab=92.57 E-value=0.094 Score=48.87 Aligned_cols=85 Identities=16% Similarity=0.253 Sum_probs=57.2
Q ss_pred hHHHHHHHHHhCCcccCC-CcCcCC---CCCCCCCC--cchHHHHHHHHHHHHHHHHc--CCCCEEEEEeCcccHHHHHH
Q psy4395 86 YFSYIAAALVGLGYQRDL-SMRGAP---YDFRKAPN--ENQEYFANFKALIEETYDLN--GGTPVVLVAHSMGSLMCLYF 157 (283)
Q Consensus 86 ~~~~l~~~L~~~g~~~~~-d~~g~g---~~~r~~~~--~~~~~~~~l~~~i~~~~~~~--~~~~v~lvgHSmGg~va~~~ 157 (283)
+|..--..|.+.|.|+++ |+||-| ..|..+.. .-...++|+.+-++.+.++. ...+..+.|-|-||+++..+
T Consensus 487 ~f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~ 566 (712)
T KOG2237|consen 487 SFRASRLSLLDRGWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGAC 566 (712)
T ss_pred ccccceeEEEecceEEEEEeeccCcccccchhhccchhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHH
Confidence 343333345568886443 889965 57755432 23345667777777766542 33489999999999999999
Q ss_pred HHcCChhHHhhhhcceEE
Q psy4395 158 LQRQSSAWKSKFVRSLVS 175 (283)
Q Consensus 158 ~~~~~~~~~~~~v~~~i~ 175 (283)
+..+|+. ++++|+
T Consensus 567 iN~rPdL-----F~avia 579 (712)
T KOG2237|consen 567 INQRPDL-----FGAVIA 579 (712)
T ss_pred hccCchH-----hhhhhh
Confidence 9999997 566553
No 480
>KOG3101|consensus
Probab=92.39 E-value=0.013 Score=47.06 Aligned_cols=38 Identities=26% Similarity=0.398 Sum_probs=27.2
Q ss_pred CCEEEEEeCcccHHHHHHHHcCChhHHhhhhcceEEecCC
Q psy4395 140 TPVVLVAHSMGSLMCLYFLQRQSSAWKSKFVRSLVSLAAP 179 (283)
Q Consensus 140 ~~v~lvgHSmGg~va~~~~~~~~~~~~~~~v~~~i~i~~p 179 (283)
.++-|.||||||-=|+-...+.|... +.|.++.-|+-|
T Consensus 141 ~k~~IfGHSMGGhGAl~~~Lkn~~ky--kSvSAFAPI~NP 178 (283)
T KOG3101|consen 141 LKVGIFGHSMGGHGALTIYLKNPSKY--KSVSAFAPICNP 178 (283)
T ss_pred hhcceeccccCCCceEEEEEcCcccc--cceeccccccCc
Confidence 36889999999988887766766652 336666655544
No 481
>smart00090 RIO RIO-like kinase.
Probab=92.18 E-value=0.14 Score=42.61 Aligned_cols=35 Identities=26% Similarity=0.183 Sum_probs=30.7
Q ss_pred ceeeeeeecccCCeeEEEEE-EcCCCcEEEEEeech
Q psy4395 225 DFEVGCPLGTGKFGHVYLAK-EKTTQIMIALKVLYK 259 (283)
Q Consensus 225 ~~~~~~~lg~g~fg~v~~~~-~~~~~~~~A~K~i~~ 259 (283)
.|.+...+|.|++|.||.+. +..+|+.||+|++..
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~ 64 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRT 64 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEc
Confidence 46677899999999999998 777999999999874
No 482
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=91.94 E-value=0.16 Score=47.18 Aligned_cols=82 Identities=15% Similarity=0.008 Sum_probs=55.8
Q ss_pred HHHhCCc-ccCCCcCcCCCCCCCCCCcchHHHHHHHHHHHHHHHH-cCCCCEEEEEeCcccHHHHHHHHcCChhHHhhhh
Q psy4395 93 ALVGLGY-QRDLSMRGAPYDFRKAPNENQEYFANFKALIEETYDL-NGGTPVVLVAHSMGSLMCLYFLQRQSSAWKSKFV 170 (283)
Q Consensus 93 ~L~~~g~-~~~~d~~g~g~~~r~~~~~~~~~~~~l~~~i~~~~~~-~~~~~v~lvgHSmGg~va~~~~~~~~~~~~~~~v 170 (283)
.++..|| ++..|.||.+.|...-......-++|-.+.|+-+.++ ..+-+|-.+|-|.+|....++|...|.. +
T Consensus 75 ~~aa~GYavV~qDvRG~~~SeG~~~~~~~~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPa-----L 149 (563)
T COG2936 75 WFAAQGYAVVNQDVRGRGGSEGVFDPESSREAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPA-----L 149 (563)
T ss_pred eeecCceEEEEecccccccCCcccceeccccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCch-----h
Confidence 5788999 8899999988664221111111234555666666554 2233899999999999999999887776 7
Q ss_pred cceEEecCC
Q psy4395 171 RSLVSLAAP 179 (283)
Q Consensus 171 ~~~i~i~~p 179 (283)
++++...+.
T Consensus 150 kai~p~~~~ 158 (563)
T COG2936 150 KAIAPTEGL 158 (563)
T ss_pred eeecccccc
Confidence 776655443
No 483
>KOG0669|consensus
Probab=91.85 E-value=0.0036 Score=51.69 Aligned_cols=54 Identities=30% Similarity=0.470 Sum_probs=42.0
Q ss_pred CceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH------------H-HHhcCCCcceeeeEE
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE------------I-INERMTHQGMILAFT 277 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~------------~-~~~~~~h~~iv~l~~ 277 (283)
..|.....+|+|.||.||+|+.+++|+.||+|++-.+. + ..+.+.|+|++.+.+
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliE 83 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 83 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHH
Confidence 45666778999999999999999999999998876521 1 223578999887765
No 484
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=91.64 E-value=0.66 Score=42.25 Aligned_cols=37 Identities=24% Similarity=0.278 Sum_probs=27.5
Q ss_pred CEEEEEeCcccHHHHHHHHcCChhHHhhhhcceEEecCCC
Q psy4395 141 PVVLVAHSMGSLMCLYFLQRQSSAWKSKFVRSLVSLAAPW 180 (283)
Q Consensus 141 ~v~lvgHSmGg~va~~~~~~~~~~~~~~~v~~~i~i~~p~ 180 (283)
.|.|+|+|-|+..++.++.. |.. +..+++.|+.+++.
T Consensus 181 NVTl~GeSAGa~si~~Lla~-P~A--kGLF~rAi~~Sg~~ 217 (491)
T COG2272 181 NVTLFGESAGAASILTLLAV-PSA--KGLFHRAIALSGAA 217 (491)
T ss_pred ceEEeeccchHHHHHHhhcC-ccc--hHHHHHHHHhCCCC
Confidence 69999999999998887765 432 22377778777654
No 485
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=91.60 E-value=0.45 Score=39.40 Aligned_cols=56 Identities=14% Similarity=-0.001 Sum_probs=42.9
Q ss_pred CceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHH---------------HH-----HhcCCCcceeeeEEEEEC
Q psy4395 224 SDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVE---------------II-----NERMTHQGMILAFTCYRN 281 (283)
Q Consensus 224 ~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~---------------~~-----~~~~~h~~iv~l~~~~~~ 281 (283)
..|...+.++.|.||.|+++.. ++..+|+|++.... .. ..+++||+|......+.+
T Consensus 31 ~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~ 106 (232)
T PRK10359 31 YNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLL 106 (232)
T ss_pred CceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeee
Confidence 4788999999999999999755 46679999996321 11 226789999998887664
No 486
>KOG1165|consensus
Probab=90.62 E-value=0.21 Score=43.21 Aligned_cols=37 Identities=27% Similarity=0.478 Sum_probs=33.3
Q ss_pred cCceeeeeeecccCCeeEEEEEEcCCCcEEEEEeech
Q psy4395 223 MSDFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYK 259 (283)
Q Consensus 223 ~~~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~ 259 (283)
.-.|.+++.||.|+||.+++....-+++.||||.=.+
T Consensus 27 G~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPr 63 (449)
T KOG1165|consen 27 GPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPR 63 (449)
T ss_pred cccceeccccccCcceeeecccccccCceEEEEeccc
Confidence 3468999999999999999999999999999998654
No 487
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=90.26 E-value=0.31 Score=45.74 Aligned_cols=91 Identities=14% Similarity=0.243 Sum_probs=59.0
Q ss_pred hHHHHHHHHHhCCcccCC-CcCcCC---CCCCCCCC--cchHHHHHHHHHHHHHHHH-c-CCCCEEEEEeCcccHHHHHH
Q psy4395 86 YFSYIAAALVGLGYQRDL-SMRGAP---YDFRKAPN--ENQEYFANFKALIEETYDL-N-GGTPVVLVAHSMGSLMCLYF 157 (283)
Q Consensus 86 ~~~~l~~~L~~~g~~~~~-d~~g~g---~~~r~~~~--~~~~~~~~l~~~i~~~~~~-~-~~~~v~lvgHSmGg~va~~~ 157 (283)
.|....=.|.++|+++++ -.||-| ..|-.+.. .-...++|+.+..+.+.++ + ....++++|-|-||+++-..
T Consensus 465 ~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav 544 (682)
T COG1770 465 SFSIARLSLLDRGFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAV 544 (682)
T ss_pred CcccceeeeecCceEEEEEEeecccccChHHHHhhhhhhccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHH
Confidence 455555568899997665 357754 45522211 2233455666666666554 2 22379999999999999999
Q ss_pred HHcCChhHHhhhhcceEEecCCCCc
Q psy4395 158 LQRQSSAWKSKFVRSLVSLAAPWGG 182 (283)
Q Consensus 158 ~~~~~~~~~~~~v~~~i~i~~p~~g 182 (283)
+...|+. .+++|+- -|+..
T Consensus 545 ~N~~P~l-----f~~iiA~-VPFVD 563 (682)
T COG1770 545 ANMAPDL-----FAGIIAQ-VPFVD 563 (682)
T ss_pred HhhChhh-----hhheeec-CCccc
Confidence 9999997 6776643 45543
No 488
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=89.68 E-value=0.62 Score=41.52 Aligned_cols=49 Identities=10% Similarity=0.208 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHc---C-CCCEEEEEeCcccHHHHHHHHcCChhHHhhhhcceEEecC
Q psy4395 125 NFKALIEETYDLN---G-GTPVVLVAHSMGSLMCLYFLQRQSSAWKSKFVRSLVSLAA 178 (283)
Q Consensus 125 ~l~~~i~~~~~~~---~-~~~v~lvgHSmGg~va~~~~~~~~~~~~~~~v~~~i~i~~ 178 (283)
|+..++..+.+.. + +.|++++|+|-||.+|...+.-.|-. ++++|=-++
T Consensus 165 D~INAl~~l~k~~~~~~~~lp~I~~G~s~G~yla~l~~k~aP~~-----~~~~iDns~ 217 (403)
T PF11144_consen 165 DIINALLDLKKIFPKNGGGLPKIYIGSSHGGYLAHLCAKIAPWL-----FDGVIDNSS 217 (403)
T ss_pred HHHHHHHHHHHhhhcccCCCcEEEEecCcHHHHHHHHHhhCccc-----eeEEEecCc
Confidence 4444444444332 2 36999999999999999988888765 787775443
No 489
>COG4099 Predicted peptidase [General function prediction only]
Probab=89.42 E-value=1.1 Score=38.19 Aligned_cols=36 Identities=11% Similarity=0.152 Sum_probs=31.4
Q ss_pred CCCEEEEEeCcccHHHHHHHHcCChhHHhhhhcceEEecCC
Q psy4395 139 GTPVVLVAHSMGSLMCLYFLQRQSSAWKSKFVRSLVSLAAP 179 (283)
Q Consensus 139 ~~~v~lvgHSmGg~va~~~~~~~~~~~~~~~v~~~i~i~~p 179 (283)
..++.++|.|+||..+.+++.++|+- ..+.+.+++.
T Consensus 268 ~sRIYviGlSrG~~gt~al~~kfPdf-----FAaa~~iaG~ 303 (387)
T COG4099 268 RSRIYVIGLSRGGFGTWALAEKFPDF-----FAAAVPIAGG 303 (387)
T ss_pred cceEEEEeecCcchhhHHHHHhCchh-----hheeeeecCC
Confidence 35899999999999999999999997 7888888653
No 490
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=88.76 E-value=0.27 Score=31.64 Aligned_cols=18 Identities=11% Similarity=-0.252 Sum_probs=9.5
Q ss_pred cCCCCccEEEecCCcccc
Q psy4395 8 CQETVEVRKEMPGDGGSQ 25 (283)
Q Consensus 8 ~~~~~~pvv~ipG~~gs~ 25 (283)
....++||+|.||+++|.
T Consensus 39 ~~~~k~pVll~HGL~~ss 56 (63)
T PF04083_consen 39 QNKKKPPVLLQHGLLQSS 56 (63)
T ss_dssp TTTT--EEEEE--TT--G
T ss_pred cCCCCCcEEEECCcccCh
Confidence 345588999999999998
No 491
>KOG2385|consensus
Probab=88.68 E-value=1.1 Score=41.00 Aligned_cols=58 Identities=19% Similarity=0.298 Sum_probs=39.2
Q ss_pred cCCCCEEEEEeCcccHHHHHHHHcCChhHHhhhhcceEEecCCCCcchhh---HHHHhhhc
Q psy4395 137 NGGTPVVLVAHSMGSLMCLYFLQRQSSAWKSKFVRSLVSLAAPWGGSVKA---VKVFAVEN 194 (283)
Q Consensus 137 ~~~~~v~lvgHSmGg~va~~~~~~~~~~~~~~~v~~~i~i~~p~~g~~~~---~~~~~~g~ 194 (283)
.+.+||.|||.|+|+-+..+.+....++..-.-|..+|++++|..-..+. .+.+.+|.
T Consensus 444 qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~k~~~w~k~r~vVsGR 504 (633)
T KOG2385|consen 444 QGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPTKAKLWLKARSVVSGR 504 (633)
T ss_pred cCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccCCHHHHHHHHhheecc
Confidence 47789999999999999987766432221123388899999997654443 23455554
No 492
>KOG2182|consensus
Probab=88.63 E-value=2.2 Score=38.99 Aligned_cols=85 Identities=12% Similarity=0.026 Sum_probs=65.1
Q ss_pred HHHHhCCc-ccCCCcCcCCCCCCCCCC--------cchHHHHHHHHHHHHHHHHcC---CCCEEEEEeCcccHHHHHHHH
Q psy4395 92 AALVGLGY-QRDLSMRGAPYDFRKAPN--------ENQEYFANFKALIEETYDLNG---GTPVVLVAHSMGSLMCLYFLQ 159 (283)
Q Consensus 92 ~~L~~~g~-~~~~d~~g~g~~~r~~~~--------~~~~~~~~l~~~i~~~~~~~~---~~~v~lvgHSmGg~va~~~~~ 159 (283)
..-.+.|- ++.+.+|=+|.++..... +....+.|++.+|+.+..+++ ..|.+.+|-|.-|.++..+=.
T Consensus 112 ~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~ 191 (514)
T KOG2182|consen 112 QWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFRE 191 (514)
T ss_pred HHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHH
Confidence 33345566 888889999976543332 245677889999999987753 238999999999999999999
Q ss_pred cCChhHHhhhhcceEEecCCCC
Q psy4395 160 RQSSAWKSKFVRSLVSLAAPWG 181 (283)
Q Consensus 160 ~~~~~~~~~~v~~~i~i~~p~~ 181 (283)
.+|+. |.+-|.-++|..
T Consensus 192 ~yPel-----~~GsvASSapv~ 208 (514)
T KOG2182|consen 192 KYPEL-----TVGSVASSAPVL 208 (514)
T ss_pred hCchh-----heeeccccccee
Confidence 99997 888888777754
No 493
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=88.42 E-value=0.91 Score=40.23 Aligned_cols=59 Identities=22% Similarity=0.398 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHHHHcCChhHHhhhhcceEEecCCCCc
Q psy4395 123 FANFKALIEETYDLNGGTPVVLVAHSMGSLMCLYFLQRQSSAWKSKFVRSLVSLAAPWGG 182 (283)
Q Consensus 123 ~~~l~~~i~~~~~~~~~~~v~lvgHSmGg~va~~~~~~~~~~~~~~~v~~~i~i~~p~~g 182 (283)
..++.+..+.+.+..+.+.++|+|-|.||.+++.+++.....-+....+++|+|+ ||.-
T Consensus 178 L~qlv~~Y~~Lv~~~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLIS-PWv~ 236 (374)
T PF10340_consen 178 LRQLVATYDYLVESEGNKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILIS-PWVN 236 (374)
T ss_pred HHHHHHHHHHHHhccCCCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEEC-CCcC
Confidence 3455555566664456779999999999999988766521111112367888884 5543
No 494
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=88.01 E-value=0.97 Score=37.28 Aligned_cols=43 Identities=26% Similarity=0.325 Sum_probs=28.3
Q ss_pred CCCCEEEEEeCcccHHHHHHHHcCChhHH-hhhhcceEEecCCC
Q psy4395 138 GGTPVVLVAHSMGSLMCLYFLQRQSSAWK-SKFVRSLVSLAAPW 180 (283)
Q Consensus 138 ~~~~v~lvgHSmGg~va~~~~~~~~~~~~-~~~v~~~i~i~~p~ 180 (283)
...+++++|+|+|+.++...+.+.-.... ....-.+|+++-|.
T Consensus 46 ~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~l~fVl~gnP~ 89 (225)
T PF08237_consen 46 AGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDDLSFVLIGNPR 89 (225)
T ss_pred CCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCceEEEEecCCC
Confidence 45599999999999999877665311000 00134688888774
No 495
>KOG0670|consensus
Probab=87.93 E-value=0.6 Score=42.92 Aligned_cols=38 Identities=26% Similarity=0.430 Sum_probs=34.5
Q ss_pred ceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechHHH
Q psy4395 225 DFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKVEI 262 (283)
Q Consensus 225 ~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~~~ 262 (283)
.|.+....|.|-|+.|..|.+.+.|+.||||+|...++
T Consensus 433 RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~ 470 (752)
T KOG0670|consen 433 RYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEV 470 (752)
T ss_pred eeEEEeccccceeeeeeeccccCCCCeeEEEEeecchH
Confidence 57788899999999999999999999999999998764
No 496
>KOG1167|consensus
Probab=87.76 E-value=0.15 Score=45.06 Aligned_cols=61 Identities=28% Similarity=0.508 Sum_probs=46.9
Q ss_pred cCceeeeeeecccCCeeEEEEEEcC---CCcEEEEEeechH----HHHH------hcCCCcceeeeEEEEECCC
Q psy4395 223 MSDFEVGCPLGTGKFGHVYLAKEKT---TQIMIALKVLYKV----EIIN------ERMTHQGMILAFTCYRNPH 283 (283)
Q Consensus 223 ~~~~~~~~~lg~g~fg~v~~~~~~~---~~~~~A~K~i~~~----~~~~------~~~~h~~iv~l~~~~~~~~ 283 (283)
...|.....+|.|+|+.|+.+.... .+..+|+|.|... .+.. +--.+.||+++.+||..++
T Consensus 35 ~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd 108 (418)
T KOG1167|consen 35 SNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSPSRILNELEMLYRLGGSDNIIKLNGCFRNND 108 (418)
T ss_pred hhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCchHHHHHHHHHHHhccchhhhcchhhhccCC
Confidence 3467888999999999999998887 6788999999753 2222 2346889999998887653
No 497
>KOG2112|consensus
Probab=87.76 E-value=1.1 Score=36.03 Aligned_cols=56 Identities=16% Similarity=0.175 Sum_probs=39.4
Q ss_pred cchHHHHHHHHHHHHHHHHc-CCCCEEEEEeCcccHHHHHHHHcCChhHHhhhhcceEEecC
Q psy4395 118 ENQEYFANFKALIEETYDLN-GGTPVVLVAHSMGSLMCLYFLQRQSSAWKSKFVRSLVSLAA 178 (283)
Q Consensus 118 ~~~~~~~~l~~~i~~~~~~~-~~~~v~lvgHSmGg~va~~~~~~~~~~~~~~~v~~~i~i~~ 178 (283)
.....++.+.++|++..+.- +...+.+-|.||||.++++.+..++.. +.+.+...+
T Consensus 70 ~~~~aa~~i~~Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~-----l~G~~~~s~ 126 (206)
T KOG2112|consen 70 GLHRAADNIANLIDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKA-----LGGIFALSG 126 (206)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCccceeEcccCchHHHHHHHHhccccc-----cceeecccc
Confidence 34455566777777665531 223588999999999999999988765 677665543
No 498
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=87.10 E-value=0.65 Score=37.18 Aligned_cols=33 Identities=33% Similarity=0.377 Sum_probs=27.7
Q ss_pred eeeeeeecccCCeeEEEEEEcCCCcEEEEEeech
Q psy4395 226 FEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYK 259 (283)
Q Consensus 226 ~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~ 259 (283)
+.+.+.++.|+||.||.+... +|+.+|+|++..
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~ 49 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDP-DGNPVALKFHRL 49 (198)
T ss_pred hhcCCccccCcceEEEEEEcC-CCCEEEEEEEec
Confidence 555678999999999999875 799999998653
No 499
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=87.08 E-value=0.62 Score=39.69 Aligned_cols=32 Identities=28% Similarity=0.399 Sum_probs=26.9
Q ss_pred EEEEEeCcccHHHHHHHHcCChhHHhhhhcceEEecC
Q psy4395 142 VVLVAHSMGSLMCLYFLQRQSSAWKSKFVRSLVSLAA 178 (283)
Q Consensus 142 v~lvgHSmGg~va~~~~~~~~~~~~~~~v~~~i~i~~ 178 (283)
=+|.|-||||+++++.+..+|+. +..+++.++
T Consensus 179 r~L~G~SlGG~vsL~agl~~Pe~-----FG~V~s~Sp 210 (299)
T COG2382 179 RVLAGDSLGGLVSLYAGLRHPER-----FGHVLSQSG 210 (299)
T ss_pred cEEeccccccHHHHHHHhcCchh-----hceeeccCC
Confidence 57899999999999999999997 666665544
No 500
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=86.34 E-value=0.64 Score=43.51 Aligned_cols=35 Identities=29% Similarity=0.436 Sum_probs=30.4
Q ss_pred ceeeeeeecccCCeeEEEEEEcCCCcEEEEEeechH
Q psy4395 225 DFEVGCPLGTGKFGHVYLAKEKTTQIMIALKVLYKV 260 (283)
Q Consensus 225 ~~~~~~~lg~g~fg~v~~~~~~~~~~~~A~K~i~~~ 260 (283)
+|.. ..++.|++|+|+.|+.+.+|+.||+|+++..
T Consensus 121 ~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~ 155 (537)
T PRK04750 121 DFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPD 155 (537)
T ss_pred hcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcc
Confidence 4554 6899999999999999988999999999853
Done!