Query psy4398
Match_columns 306
No_of_seqs 183 out of 1733
Neff 8.1
Searched_HMMs 29240
Date Sat Aug 17 00:30:10 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4398.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4398hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vhn_A Putative flavin oxidore 100.0 1.5E-41 5E-46 313.9 19.3 221 27-266 1-225 (318)
2 3b0p_A TRNA-dihydrouridine syn 100.0 2.9E-40 9.8E-45 308.7 19.1 220 28-265 1-236 (350)
3 1z41_A YQJM, probable NADH-dep 100.0 4E-39 1.4E-43 299.9 17.1 248 20-271 7-324 (338)
4 3gr7_A NADPH dehydrogenase; fl 100.0 1.2E-38 4.3E-43 296.3 17.5 245 20-267 7-320 (340)
5 3l5a_A NADH/flavin oxidoreduct 100.0 2.4E-38 8.1E-43 301.3 15.4 263 20-288 29-377 (419)
6 4ef8_A Dihydroorotate dehydrog 100.0 1.1E-38 3.9E-43 296.8 11.5 257 16-277 32-333 (354)
7 3zwt_A Dihydroorotate dehydrog 100.0 5.1E-38 1.7E-42 294.3 15.1 260 20-300 50-363 (367)
8 3hgj_A Chromate reductase; TIM 100.0 2E-37 7E-42 289.4 18.9 245 20-267 6-331 (349)
9 2r14_A Morphinone reductase; H 100.0 2.5E-38 8.4E-43 297.9 12.7 242 20-266 13-340 (377)
10 3kru_A NADH:flavin oxidoreduct 100.0 9E-38 3.1E-42 290.3 14.9 260 20-292 6-336 (343)
11 2gou_A Oxidoreductase, FMN-bin 100.0 1.8E-37 6.3E-42 291.0 13.4 241 20-266 7-334 (365)
12 1vyr_A Pentaerythritol tetrani 100.0 2.8E-37 9.7E-42 289.7 14.3 241 20-266 7-335 (364)
13 3oix_A Putative dihydroorotate 100.0 2.3E-37 7.8E-42 287.3 12.2 259 20-300 38-340 (345)
14 3i65_A Dihydroorotate dehydrog 100.0 3.7E-37 1.3E-41 290.3 12.6 260 20-300 84-410 (415)
15 1jub_A Dihydroorotate dehydrog 100.0 5.1E-37 1.7E-41 282.6 12.3 263 19-300 1-307 (311)
16 1icp_A OPR1, 12-oxophytodienoa 100.0 5.1E-37 1.8E-41 288.9 11.2 244 20-267 18-343 (376)
17 3l5l_A Xenobiotic reductase A; 100.0 2.3E-36 7.8E-41 283.6 15.5 245 20-267 6-338 (363)
18 1tv5_A Dhodehase, dihydroorota 100.0 3.5E-36 1.2E-40 287.1 14.1 251 20-278 82-430 (443)
19 2hsa_B 12-oxophytodienoate red 100.0 3.5E-36 1.2E-40 285.3 13.3 244 20-267 20-361 (402)
20 1ps9_A 2,4-dienoyl-COA reducta 100.0 8.2E-36 2.8E-40 300.7 14.6 260 20-286 7-339 (671)
21 2e6f_A Dihydroorotate dehydrog 100.0 1E-35 3.5E-40 274.2 13.5 253 20-277 4-300 (314)
22 4ab4_A Xenobiotic reductase B; 100.0 9.1E-36 3.1E-40 278.4 13.3 235 20-266 6-320 (362)
23 1o94_A Tmadh, trimethylamine d 100.0 8E-36 2.7E-40 303.3 12.9 259 20-286 11-350 (729)
24 3gka_A N-ethylmaleimide reduct 100.0 1.6E-35 5.6E-40 276.6 13.1 236 20-267 14-329 (361)
25 3k30_A Histamine dehydrogenase 100.0 1.6E-35 5.4E-40 299.5 12.9 265 20-291 16-359 (690)
26 1ep3_A Dihydroorotate dehydrog 100.0 2.5E-34 8.5E-39 264.2 7.2 251 20-277 7-296 (311)
27 4a3u_A NCR, NADH\:flavin oxido 100.0 1.5E-33 5.3E-38 263.8 11.4 244 20-267 6-328 (358)
28 3aty_A Tcoye, prostaglandin F2 100.0 2.2E-33 7.5E-38 264.2 12.2 239 20-266 9-348 (379)
29 1f76_A Dihydroorotate dehydrog 100.0 1.9E-32 6.5E-37 254.7 15.5 239 20-266 45-331 (336)
30 3tjl_A NADPH dehydrogenase; OL 100.0 6.3E-33 2.1E-37 261.7 7.4 244 20-266 16-358 (407)
31 3tjx_A Dihydroorotate dehydrog 100.0 5.3E-31 1.8E-35 246.6 14.1 255 18-277 34-333 (354)
32 4gbu_A NADPH dehydrogenase 1; 100.0 9.4E-31 3.2E-35 248.3 10.8 245 20-267 19-361 (400)
33 1gte_A Dihydropyrimidine dehyd 100.0 4.1E-30 1.4E-34 269.7 15.5 262 20-284 533-851 (1025)
34 1p0k_A Isopentenyl-diphosphate 99.9 6.8E-23 2.3E-27 191.2 15.7 229 20-278 45-316 (349)
35 2nli_A Lactate oxidase; flavoe 99.9 2E-22 6.9E-27 188.9 13.0 228 20-278 70-349 (368)
36 1gox_A (S)-2-hydroxy-acid oxid 99.9 2.9E-21 9.8E-26 181.4 14.4 234 20-286 61-354 (370)
37 2nzl_A Hydroxyacid oxidase 1; 99.8 4.4E-21 1.5E-25 181.0 13.4 227 20-278 84-372 (392)
38 1vcf_A Isopentenyl-diphosphate 99.8 8.6E-21 2.9E-25 175.8 11.4 228 20-278 48-320 (332)
39 1kbi_A Cytochrome B2, L-LCR; f 99.8 3.6E-20 1.2E-24 180.2 16.2 229 20-278 179-468 (511)
40 2z6i_A Trans-2-enoyl-ACP reduc 99.8 8.2E-19 2.8E-23 162.5 18.7 199 27-276 9-214 (332)
41 3vkj_A Isopentenyl-diphosphate 99.8 1.5E-18 5.1E-23 162.3 12.3 230 20-278 49-331 (368)
42 1p4c_A L(+)-mandelate dehydrog 99.8 2.3E-18 7.9E-23 162.1 13.5 225 20-278 62-343 (380)
43 1ypf_A GMP reductase; GUAC, pu 99.8 2.8E-17 9.5E-22 152.4 17.5 194 20-258 36-243 (336)
44 3sr7_A Isopentenyl-diphosphate 99.7 9.4E-18 3.2E-22 156.4 12.5 235 15-278 70-343 (365)
45 3bo9_A Putative nitroalkan dio 99.7 5.5E-16 1.9E-20 143.1 20.5 198 26-273 22-225 (326)
46 3bw2_A 2-nitropropane dioxygen 99.7 1.6E-15 5.3E-20 142.4 18.5 203 21-272 2-256 (369)
47 2gjl_A Hypothetical protein PA 99.7 3.2E-15 1.1E-19 138.1 19.3 198 27-273 12-221 (328)
48 1eep_A Inosine 5'-monophosphat 99.7 1.9E-15 6.4E-20 143.5 16.5 221 20-263 31-294 (404)
49 3khj_A Inosine-5-monophosphate 99.6 5E-14 1.7E-18 131.5 19.0 195 20-261 34-243 (361)
50 1mzh_A Deoxyribose-phosphate a 99.6 1E-14 3.5E-19 127.7 12.4 117 123-256 80-204 (225)
51 3r2g_A Inosine 5'-monophosphat 99.6 1.2E-13 4.1E-18 128.3 20.2 192 20-260 32-234 (361)
52 2agk_A 1-(5-phosphoribosyl)-5- 99.5 1.2E-14 4.2E-19 129.8 9.5 154 104-276 77-260 (260)
53 3sgz_A Hydroxyacid oxidase 2; 99.5 4.6E-14 1.6E-18 130.6 13.0 228 20-278 59-337 (352)
54 2qr6_A IMP dehydrogenase/GMP r 99.5 1.1E-13 3.7E-18 130.8 11.6 221 20-261 57-313 (393)
55 3ffs_A Inosine-5-monophosphate 99.5 3.4E-12 1.2E-16 120.1 19.2 217 20-261 31-282 (400)
56 4fo4_A Inosine 5'-monophosphat 99.5 9.4E-13 3.2E-17 122.8 15.1 196 20-261 35-247 (366)
57 1jvn_A Glutamine, bifunctional 99.4 2.1E-13 7.1E-18 134.2 10.3 178 103-283 327-554 (555)
58 2c6q_A GMP reductase 2; TIM ba 99.4 1.9E-11 6.4E-16 113.7 19.7 195 20-259 42-257 (351)
59 2y88_A Phosphoribosyl isomeras 99.4 4E-12 1.4E-16 112.0 14.0 147 100-265 73-236 (244)
60 1thf_D HISF protein; thermophI 99.3 6E-11 2E-15 105.0 16.3 160 100-279 73-248 (253)
61 3tdn_A FLR symmetric alpha-bet 99.3 7E-13 2.4E-17 117.4 3.3 147 100-265 78-240 (247)
62 1vzw_A Phosphoribosyl isomeras 99.3 3.3E-11 1.1E-15 106.2 14.0 146 100-263 74-231 (244)
63 1ka9_F Imidazole glycerol phos 99.3 6.7E-11 2.3E-15 104.6 15.7 160 100-279 74-249 (252)
64 4fxs_A Inosine-5'-monophosphat 99.3 5.3E-11 1.8E-15 115.5 16.0 127 112-259 229-368 (496)
65 1h5y_A HISF; histidine biosynt 99.3 3.5E-11 1.2E-15 105.9 13.3 160 101-279 77-251 (253)
66 2w6r_A Imidazole glycerol phos 99.3 3.2E-11 1.1E-15 107.7 13.2 163 100-282 73-256 (266)
67 4avf_A Inosine-5'-monophosphat 99.3 1.5E-10 5E-15 112.3 17.4 128 111-259 226-366 (490)
68 1qo2_A Molecule: N-((5-phospho 99.2 4.3E-11 1.5E-15 105.4 9.6 146 101-265 73-234 (241)
69 1xm3_A Thiazole biosynthesis p 99.2 5.2E-10 1.8E-14 100.0 16.0 202 21-260 3-213 (264)
70 2qjg_A Putative aldolase MJ040 99.1 6E-10 2E-14 99.8 14.2 200 28-274 31-259 (273)
71 4gj1_A 1-(5-phosphoribosyl)-5- 99.1 4.3E-10 1.5E-14 99.4 12.7 143 103-261 75-231 (243)
72 1jcn_A Inosine monophosphate d 99.1 4.9E-10 1.7E-14 109.3 13.5 131 113-264 254-397 (514)
73 3o07_A Pyridoxine biosynthesis 99.1 1.4E-09 4.8E-14 96.1 13.8 142 103-261 13-236 (291)
74 2yzr_A Pyridoxal biosynthesis 99.1 9E-10 3.1E-14 99.9 12.8 138 117-261 27-280 (330)
75 2pgw_A Muconate cycloisomerase 99.1 3.7E-09 1.3E-13 99.4 16.1 152 102-278 137-294 (384)
76 1wv2_A Thiazole moeity, thiazo 99.0 8.9E-08 3E-12 84.0 23.2 207 21-261 10-225 (265)
77 1mdl_A Mandelate racemase; iso 99.0 9.3E-09 3.2E-13 95.7 17.0 155 101-279 133-294 (359)
78 2rdx_A Mandelate racemase/muco 99.0 1.2E-08 4.1E-13 95.7 15.8 149 102-278 135-290 (379)
79 1y0e_A Putative N-acetylmannos 99.0 2.7E-09 9.1E-14 92.6 10.0 97 156-259 105-209 (223)
80 3igs_A N-acetylmannosamine-6-p 98.9 3.6E-09 1.2E-13 92.7 10.7 115 121-259 96-215 (232)
81 3q58_A N-acetylmannosamine-6-p 98.9 4.1E-09 1.4E-13 92.2 10.1 118 118-259 93-215 (229)
82 2ovl_A Putative racemase; stru 98.9 2.4E-08 8.3E-13 93.3 15.8 143 112-278 146-295 (371)
83 3tdn_A FLR symmetric alpha-bet 98.9 3.3E-09 1.1E-13 93.6 8.7 93 172-265 22-119 (247)
84 2nql_A AGR_PAT_674P, isomerase 98.9 1.6E-08 5.3E-13 95.2 13.6 151 102-278 153-311 (388)
85 1yxy_A Putative N-acetylmannos 98.9 5.9E-09 2E-13 91.2 9.7 115 123-259 98-220 (234)
86 2gl5_A Putative dehydratase pr 98.9 2.9E-08 9.8E-13 94.1 14.9 166 101-279 129-323 (410)
87 2nv1_A Pyridoxal biosynthesis 98.9 2.8E-08 9.7E-13 90.5 14.0 64 214-277 193-267 (305)
88 2uva_G Fatty acid synthase bet 98.9 2.5E-08 8.6E-13 110.0 15.8 215 20-275 572-817 (2060)
89 1wa3_A 2-keto-3-deoxy-6-phosph 98.9 1.1E-08 3.9E-13 87.5 10.2 137 102-263 10-186 (205)
90 1rvk_A Isomerase/lactonizing e 98.9 8.1E-08 2.8E-12 90.1 16.8 149 111-278 148-305 (382)
91 1geq_A Tryptophan synthase alp 98.8 4.3E-08 1.5E-12 86.3 13.1 150 102-259 5-225 (248)
92 2poz_A Putative dehydratase; o 98.8 4.2E-08 1.4E-12 92.4 13.8 159 110-278 135-303 (392)
93 3ozy_A Putative mandelate race 98.8 1.7E-07 5.8E-12 88.2 17.3 153 102-279 139-301 (389)
94 2qgy_A Enolase from the enviro 98.8 1.6E-07 5.4E-12 88.5 16.5 145 110-278 147-298 (391)
95 2qdd_A Mandelate racemase/muco 98.8 9E-08 3.1E-12 89.7 14.4 122 101-249 134-258 (378)
96 2p8b_A Mandelate racemase/muco 98.8 7.4E-08 2.5E-12 89.9 13.6 152 102-278 131-290 (369)
97 2hzg_A Mandelate racemase/muco 98.8 1.3E-07 4.3E-12 89.4 15.3 156 101-278 133-300 (401)
98 2ps2_A Putative mandelate race 98.7 1.6E-07 5.5E-12 87.7 15.1 122 101-249 135-260 (371)
99 3stp_A Galactonate dehydratase 98.7 2.8E-07 9.6E-12 87.3 16.8 160 101-281 167-337 (412)
100 2qq6_A Mandelate racemase/muco 98.7 2.7E-07 9.3E-12 87.3 16.1 125 112-249 149-282 (410)
101 1vrd_A Inosine-5'-monophosphat 98.7 5.6E-08 1.9E-12 94.3 11.3 129 115-264 237-379 (494)
102 1nu5_A Chloromuconate cycloiso 98.7 3.6E-07 1.2E-11 85.2 16.3 124 103-249 133-260 (370)
103 2ox4_A Putative mandelate race 98.7 2.6E-07 9E-12 87.2 15.2 154 112-280 146-315 (403)
104 1tkk_A Similar to chloromucona 98.7 3.6E-07 1.2E-11 85.1 15.6 125 102-249 130-259 (366)
105 3usb_A Inosine-5'-monophosphat 98.7 8.6E-08 2.9E-12 93.3 11.6 125 113-259 255-393 (511)
106 2og9_A Mandelate racemase/muco 98.7 2E-07 7E-12 87.7 13.9 141 112-279 162-312 (393)
107 2oz8_A MLL7089 protein; struct 98.7 9.3E-07 3.2E-11 83.1 17.9 139 112-279 145-293 (389)
108 2zbt_A Pyridoxal biosynthesis 98.7 4.8E-08 1.6E-12 88.5 8.7 142 101-259 21-243 (297)
109 3rcy_A Mandelate racemase/muco 98.7 8.3E-07 2.9E-11 84.6 17.5 152 111-278 145-307 (433)
110 4af0_A Inosine-5'-monophosphat 98.7 1.7E-06 5.9E-11 83.2 19.6 127 110-257 277-416 (556)
111 1ea0_A Glutamate synthase [NAD 98.7 9E-08 3.1E-12 101.5 11.4 131 153-286 976-1165(1479)
112 3eez_A Putative mandelate race 98.7 2.1E-07 7.2E-12 87.2 12.7 151 101-279 134-291 (378)
113 2qde_A Mandelate racemase/muco 98.6 4.7E-07 1.6E-11 85.3 14.6 124 102-249 135-261 (397)
114 2o56_A Putative mandelate race 98.6 5.2E-07 1.8E-11 85.3 14.6 155 112-279 152-320 (407)
115 1tzz_A Hypothetical protein L1 98.6 1.4E-06 4.9E-11 81.9 17.0 142 112-278 165-318 (392)
116 1rd5_A Tryptophan synthase alp 98.6 3E-07 1E-11 81.8 11.6 150 103-259 19-235 (262)
117 2uv8_G Fatty acid synthase sub 98.6 3.9E-07 1.3E-11 100.3 14.8 234 22-298 581-847 (2051)
118 2pp0_A L-talarate/galactarate 98.6 6.6E-07 2.2E-11 84.4 14.3 143 112-279 175-325 (398)
119 3bjs_A Mandelate racemase/muco 98.6 1.6E-06 5.3E-11 82.6 16.2 142 111-278 183-334 (428)
120 3rr1_A GALD, putative D-galact 98.6 1.3E-06 4.5E-11 82.5 15.5 162 101-279 114-283 (405)
121 2gdq_A YITF; mandelate racemas 98.5 7.4E-07 2.5E-11 83.6 13.2 125 102-249 124-257 (382)
122 2htm_A Thiazole biosynthesis p 98.5 9.3E-06 3.2E-10 71.4 18.5 203 22-261 4-216 (268)
123 4dwd_A Mandelate racemase/muco 98.5 7E-06 2.4E-10 77.2 19.0 158 101-278 125-294 (393)
124 3sbf_A Mandelate racemase / mu 98.5 1.3E-06 4.5E-11 82.4 14.0 168 101-278 122-305 (401)
125 3sjn_A Mandelate racemase/muco 98.5 8.3E-07 2.9E-11 83.0 12.5 144 113-279 147-299 (374)
126 4e5t_A Mandelate racemase / mu 98.5 2.4E-06 8.3E-11 80.7 15.4 156 111-280 150-314 (404)
127 2zad_A Muconate cycloisomerase 98.5 4.5E-06 1.5E-10 77.1 16.9 148 102-278 129-287 (345)
128 4adt_A Pyridoxine biosynthetic 98.5 3.5E-06 1.2E-10 76.1 15.6 130 118-261 32-245 (297)
129 1qop_A Tryptophan synthase alp 98.5 1.8E-06 6.1E-11 77.1 13.1 151 103-259 18-239 (268)
130 3vnd_A TSA, tryptophan synthas 98.5 8.6E-07 2.9E-11 79.0 10.9 150 102-259 18-240 (267)
131 3r4e_A Mandelate racemase/muco 98.5 1.4E-06 4.8E-11 82.6 12.9 165 101-278 132-324 (418)
132 4e4u_A Mandalate racemase/muco 98.5 5.3E-06 1.8E-10 78.6 16.6 157 111-281 143-308 (412)
133 2yw3_A 4-hydroxy-2-oxoglutarat 98.4 9.5E-07 3.3E-11 75.9 10.0 156 102-274 13-200 (207)
134 3zen_D Fatty acid synthase; tr 98.4 3.6E-07 1.2E-11 103.8 8.8 198 22-261 419-653 (3089)
135 3tji_A Mandelate racemase/muco 98.4 2.4E-06 8.1E-11 81.2 13.2 168 101-278 143-326 (422)
136 2v82_A 2-dehydro-3-deoxy-6-pho 98.4 5.7E-06 2E-10 70.9 14.2 133 101-260 6-182 (212)
137 3v3w_A Starvation sensing prot 98.4 6.2E-06 2.1E-10 78.4 15.5 165 101-278 138-330 (424)
138 1qo2_A Molecule: N-((5-phospho 98.4 1.3E-07 4.4E-12 83.0 3.3 91 172-264 13-112 (241)
139 3i4k_A Muconate lactonizing en 98.4 9.6E-06 3.3E-10 76.0 16.3 153 102-278 138-298 (383)
140 1ofd_A Ferredoxin-dependent gl 98.4 4.6E-07 1.6E-11 96.3 7.8 103 153-258 1011-1132(1520)
141 3ngj_A Deoxyribose-phosphate a 98.4 4.1E-06 1.4E-10 73.1 12.1 125 116-255 98-228 (239)
142 3nav_A Tryptophan synthase alp 98.4 2.8E-06 9.7E-11 75.8 11.3 151 103-259 21-242 (271)
143 1xg4_A Probable methylisocitra 98.3 6.1E-06 2.1E-10 74.5 13.3 126 101-237 78-212 (295)
144 3vcn_A Mannonate dehydratase; 98.3 7.2E-06 2.4E-10 77.9 14.5 165 101-278 139-331 (425)
145 3oa3_A Aldolase; structural ge 98.3 6.4E-06 2.2E-10 73.6 13.0 124 116-251 129-257 (288)
146 2hxt_A L-fuconate dehydratase; 98.3 5.7E-06 2E-10 79.0 13.5 143 111-279 197-348 (441)
147 3jva_A Dipeptide epimerase; en 98.3 9.4E-06 3.2E-10 75.3 14.3 150 103-278 130-287 (354)
148 3ddm_A Putative mandelate race 98.3 8.1E-06 2.8E-10 76.8 14.0 144 110-279 153-305 (392)
149 1sjd_A N-acylamino acid racema 98.3 1.1E-05 3.7E-10 75.1 14.5 147 103-278 131-286 (368)
150 3f4w_A Putative hexulose 6 pho 98.3 4.5E-06 1.5E-10 71.4 11.0 137 101-262 53-195 (211)
151 3ro6_B Putative chloromuconate 98.3 4.5E-06 1.5E-10 77.5 11.7 124 102-249 130-256 (356)
152 1ka9_F Imidazole glycerol phos 98.3 5.6E-07 1.9E-11 79.2 4.8 82 183-265 31-115 (252)
153 3t6c_A RSPA, putative MAND fam 98.2 1.7E-05 5.7E-10 75.7 14.6 168 101-278 144-344 (440)
154 1thf_D HISF protein; thermophI 98.2 8.2E-07 2.8E-11 78.2 5.0 81 183-264 30-113 (253)
155 3toy_A Mandelate racemase/muco 98.2 4.1E-05 1.4E-09 71.7 16.7 155 101-280 156-319 (383)
156 4e4f_A Mannonate dehydratase; 98.2 1.3E-05 4.3E-10 76.3 13.2 169 101-279 138-333 (426)
157 3qja_A IGPS, indole-3-glycerol 98.2 4.3E-05 1.5E-09 68.2 16.0 144 101-274 113-261 (272)
158 3q45_A Mandelate racemase/muco 98.2 3.1E-05 1E-09 72.2 15.6 150 103-278 131-288 (368)
159 3r12_A Deoxyribose-phosphate a 98.2 2.1E-05 7.2E-10 69.3 13.6 126 116-255 114-244 (260)
160 3ugv_A Enolase; enzyme functio 98.2 3.4E-05 1.2E-09 72.5 16.0 152 102-280 158-325 (390)
161 1yad_A Regulatory protein TENI 98.2 1.4E-05 4.7E-10 69.0 12.0 87 189-276 123-216 (221)
162 3tj4_A Mandelate racemase; eno 98.2 4.3E-05 1.5E-09 71.3 16.2 155 102-281 138-304 (372)
163 3ndo_A Deoxyribose-phosphate a 98.2 2.2E-05 7.6E-10 68.2 13.1 121 116-251 83-213 (231)
164 2ekc_A AQ_1548, tryptophan syn 98.2 1.4E-05 4.7E-10 71.1 11.9 143 111-259 28-239 (262)
165 3my9_A Muconate cycloisomerase 98.2 3.2E-05 1.1E-09 72.3 14.6 151 102-279 136-296 (377)
166 1ub3_A Aldolase protein; schif 98.2 3E-05 1E-09 67.0 13.3 121 116-251 74-199 (220)
167 3gd6_A Muconate cycloisomerase 98.1 3E-05 1E-09 72.8 13.9 122 102-249 128-259 (391)
168 1w8s_A FBP aldolase, fructose- 98.1 5.5E-05 1.9E-09 67.2 14.6 117 122-262 101-239 (263)
169 3mqt_A Mandelate racemase/muco 98.1 3.9E-05 1.3E-09 72.2 13.9 142 115-279 155-306 (394)
170 1zfj_A Inosine monophosphate d 98.1 2.1E-05 7.2E-10 75.9 12.3 121 118-261 236-372 (491)
171 3dg3_A Muconate cycloisomerase 98.1 5.6E-05 1.9E-09 70.3 14.6 152 102-278 129-288 (367)
172 1tqj_A Ribulose-phosphate 3-ep 98.1 1.2E-05 4.2E-10 70.0 9.5 152 103-271 6-217 (230)
173 1ujp_A Tryptophan synthase alp 98.1 2.1E-05 7.1E-10 70.3 11.1 141 112-259 28-234 (271)
174 1h5y_A HISF; histidine biosynt 98.1 2.3E-06 8E-11 74.7 4.7 81 183-264 33-116 (253)
175 2w6r_A Imidazole glycerol phos 98.1 8.7E-06 3E-10 72.1 8.4 75 183-258 30-107 (266)
176 3vzx_A Heptaprenylglyceryl pho 98.1 7.2E-05 2.5E-09 64.8 13.9 52 215-266 166-220 (228)
177 3go2_A Putative L-alanine-DL-g 98.1 5.9E-05 2E-09 71.3 14.4 159 111-279 142-315 (409)
178 3tcs_A Racemase, putative; PSI 98.1 0.00012 3.9E-09 68.8 16.2 149 112-280 146-305 (388)
179 3i6e_A Muconate cycloisomerase 98.1 0.0001 3.5E-09 69.0 15.8 151 102-279 138-297 (385)
180 2fli_A Ribulose-phosphate 3-ep 98.1 1.1E-05 3.9E-10 69.2 8.5 150 104-273 6-216 (220)
181 1rpx_A Protein (ribulose-phosp 98.1 3.1E-05 1.1E-09 67.2 11.3 149 103-272 12-224 (230)
182 3mkc_A Racemase; metabolic pro 98.0 7.1E-05 2.4E-09 70.3 14.2 142 115-279 160-311 (394)
183 1chr_A Chloromuconate cycloiso 98.0 6.7E-05 2.3E-09 69.9 13.9 125 102-249 132-260 (370)
184 1r0m_A N-acylamino acid racema 98.0 5E-05 1.7E-09 70.8 12.9 146 104-278 139-292 (375)
185 3r0u_A Enzyme of enolase super 98.0 0.00015 5.1E-09 67.8 15.6 124 102-249 132-260 (379)
186 3cwo_X Beta/alpha-barrel prote 98.0 3.3E-05 1.1E-09 66.1 10.2 94 184-279 131-227 (237)
187 3tha_A Tryptophan synthase alp 98.0 3.5E-05 1.2E-09 67.9 10.5 148 104-259 16-232 (252)
188 3fv9_G Mandelate racemase/muco 98.0 0.00013 4.4E-09 68.4 14.9 128 100-249 133-264 (386)
189 4gj1_A 1-(5-phosphoribosyl)-5- 98.0 7.3E-06 2.5E-10 72.1 5.4 83 183-266 31-116 (243)
190 1h1y_A D-ribulose-5-phosphate 97.9 7.9E-05 2.7E-09 64.6 11.7 136 102-262 65-209 (228)
191 2y88_A Phosphoribosyl isomeras 97.9 5.3E-06 1.8E-10 72.5 4.0 78 184-263 32-112 (244)
192 3p3b_A Mandelate racemase/muco 97.9 3.3E-05 1.1E-09 72.6 9.2 149 114-281 150-310 (392)
193 2zc8_A N-acylamino acid racema 97.9 7.2E-05 2.5E-09 69.5 11.2 117 106-249 134-253 (369)
194 3tsm_A IGPS, indole-3-glycerol 97.9 0.00039 1.3E-08 61.9 15.3 143 101-273 120-267 (272)
195 1vzw_A Phosphoribosyl isomeras 97.9 6.1E-06 2.1E-10 72.2 3.4 78 184-263 33-113 (244)
196 3ovp_A Ribulose-phosphate 3-ep 97.9 4.6E-05 1.6E-09 66.3 8.9 139 103-261 6-204 (228)
197 4hnl_A Mandelate racemase/muco 97.8 0.00035 1.2E-08 66.1 15.0 167 101-279 142-326 (421)
198 3vk5_A MOEO5; TIM barrel, tran 97.8 4.7E-05 1.6E-09 67.7 8.2 72 184-261 187-263 (286)
199 3dgb_A Muconate cycloisomerase 97.8 0.00037 1.3E-08 65.1 14.7 125 102-249 138-266 (382)
200 1vcv_A Probable deoxyribose-ph 97.8 0.00044 1.5E-08 59.9 14.0 123 115-249 69-205 (226)
201 2tps_A Protein (thiamin phosph 97.8 0.00011 3.8E-09 63.2 10.3 72 189-261 129-207 (227)
202 3ajx_A 3-hexulose-6-phosphate 97.8 0.00038 1.3E-08 59.0 13.5 145 101-272 53-203 (207)
203 3inp_A D-ribulose-phosphate 3- 97.8 4.6E-05 1.6E-09 67.0 7.6 139 103-261 29-230 (246)
204 1viz_A PCRB protein homolog; s 97.8 5.7E-05 1.9E-09 66.1 7.9 131 119-265 25-222 (240)
205 2f6u_A GGGPS, (S)-3-O-geranylg 97.8 0.00012 4.1E-09 63.7 9.8 48 214-261 175-225 (234)
206 3mwc_A Mandelate racemase/muco 97.8 0.00019 6.6E-09 67.5 11.9 121 102-249 150-276 (400)
207 1n7k_A Deoxyribose-phosphate a 97.8 0.00044 1.5E-08 60.2 13.2 118 116-251 91-215 (234)
208 4e8g_A Enolase, mandelate race 97.7 0.00032 1.1E-08 65.8 13.0 148 102-279 154-312 (391)
209 1p1x_A Deoxyribose-phosphate a 97.7 0.0003 1E-08 62.1 12.1 127 116-256 88-227 (260)
210 3fcp_A L-Ala-D/L-Glu epimerase 97.7 0.00097 3.3E-08 62.2 15.7 125 102-249 137-265 (381)
211 4a35_A Mitochondrial enolase s 97.7 0.0014 4.9E-08 62.3 16.9 148 110-283 199-357 (441)
212 3dip_A Enolase; structural gen 97.7 0.00056 1.9E-08 64.5 14.0 149 118-279 162-319 (410)
213 2a4a_A Deoxyribose-phosphate a 97.7 0.0004 1.4E-08 62.0 12.1 126 116-256 109-254 (281)
214 2qr6_A IMP dehydrogenase/GMP r 97.7 0.00025 8.6E-09 66.5 11.2 97 153-255 140-240 (393)
215 1vc4_A Indole-3-glycerol phosp 97.7 0.00011 3.8E-09 64.9 8.2 132 101-263 106-245 (254)
216 1xi3_A Thiamine phosphate pyro 97.6 0.00048 1.6E-08 58.5 11.6 71 190-262 122-198 (215)
217 3o63_A Probable thiamine-phosp 97.6 0.00017 5.9E-09 63.2 8.6 73 189-262 148-227 (243)
218 1me8_A Inosine-5'-monophosphat 97.6 0.00035 1.2E-08 67.7 11.6 117 120-258 247-385 (503)
219 3ctl_A D-allulose-6-phosphate 97.6 0.00021 7.4E-09 62.1 9.2 139 104-262 3-204 (231)
220 3glc_A Aldolase LSRF; TIM barr 97.6 0.00057 2E-08 61.5 11.4 138 101-261 105-264 (295)
221 4dxk_A Mandelate racemase / mu 97.6 0.00026 8.9E-09 66.6 9.4 145 122-279 163-315 (400)
222 3ik4_A Mandelate racemase/muco 97.5 0.0023 7.9E-08 59.3 15.0 152 102-278 133-292 (365)
223 2p10_A MLL9387 protein; putati 97.5 0.00024 8.2E-09 63.0 7.7 149 101-259 94-264 (286)
224 3w01_A Heptaprenylglyceryl pho 97.4 0.0013 4.4E-08 57.2 11.5 124 123-261 33-221 (235)
225 1vhc_A Putative KHG/KDPG aldol 97.4 0.002 6.7E-08 55.7 12.2 138 103-259 18-190 (224)
226 1i4n_A Indole-3-glycerol phosp 97.4 0.0015 5E-08 57.5 11.1 132 101-261 101-237 (251)
227 3q94_A Fructose-bisphosphate a 97.3 0.0038 1.3E-07 55.8 13.8 138 99-251 78-230 (288)
228 3lab_A Putative KDPG (2-keto-3 97.3 0.00073 2.5E-08 58.0 8.8 143 102-261 13-193 (217)
229 4e38_A Keto-hydroxyglutarate-a 97.3 0.00074 2.5E-08 58.7 8.6 139 102-258 34-206 (232)
230 2agk_A 1-(5-phosphoribosyl)-5- 97.2 0.00022 7.5E-09 63.2 4.4 69 183-260 38-109 (260)
231 4eiv_A Deoxyribose-phosphate a 97.2 0.003 1E-07 56.3 11.5 126 116-256 103-260 (297)
232 3ih1_A Methylisocitrate lyase; 97.2 0.0089 3E-07 53.9 14.7 188 26-234 23-217 (305)
233 4dye_A Isomerase; enolase fami 97.2 0.0049 1.7E-07 57.8 13.5 111 113-249 169-282 (398)
234 1vli_A Spore coat polysacchari 97.2 0.021 7.1E-07 53.0 17.1 205 20-251 14-242 (385)
235 1gvf_A Tagatose-bisphosphate a 97.1 0.0078 2.7E-07 53.8 13.6 138 100-251 73-226 (286)
236 3jr2_A Hexulose-6-phosphate sy 97.1 0.0017 5.8E-08 55.7 8.9 135 103-259 8-199 (218)
237 1jvn_A Glutamine, bifunctional 97.1 0.00048 1.6E-08 67.5 5.8 77 183-259 280-372 (555)
238 1wbh_A KHG/KDPG aldolase; lyas 97.1 0.0028 9.7E-08 54.3 9.6 141 102-261 16-191 (214)
239 4a29_A Engineered retro-aldol 97.0 0.012 4.1E-07 51.5 13.3 131 111-262 64-241 (258)
240 2hjp_A Phosphonopyruvate hydro 97.0 0.012 4.2E-07 52.6 13.6 184 32-234 15-211 (290)
241 2chr_A Chloromuconate cycloiso 97.0 0.026 8.9E-07 52.1 16.3 123 104-249 134-260 (370)
242 2vc6_A MOSA, dihydrodipicolina 97.0 0.014 4.8E-07 52.3 13.7 123 111-248 18-152 (292)
243 1o66_A 3-methyl-2-oxobutanoate 97.0 0.034 1.2E-06 49.2 15.8 161 40-236 23-204 (275)
244 1tqx_A D-ribulose-5-phosphate 96.9 0.0024 8.2E-08 55.3 8.0 135 101-262 64-209 (227)
245 1rvg_A Fructose-1,6-bisphospha 96.9 0.026 8.8E-07 50.8 14.6 124 100-237 71-211 (305)
246 3l21_A DHDPS, dihydrodipicolin 96.9 0.011 3.8E-07 53.3 12.2 123 111-248 33-167 (304)
247 4hpn_A Putative uncharacterize 96.9 0.026 8.8E-07 52.3 15.0 131 121-279 154-293 (378)
248 1xky_A Dihydrodipicolinate syn 96.8 0.016 5.4E-07 52.2 12.9 123 111-248 30-164 (301)
249 1pii_A N-(5'phosphoribosyl)ant 96.8 0.0096 3.3E-07 56.6 11.9 142 101-272 108-253 (452)
250 3flu_A DHDPS, dihydrodipicolin 96.8 0.017 5.8E-07 51.9 13.0 123 111-248 25-159 (297)
251 2r8w_A AGR_C_1641P; APC7498, d 96.8 0.027 9.1E-07 51.5 14.3 123 111-248 52-186 (332)
252 2ehh_A DHDPS, dihydrodipicolin 96.8 0.019 6.4E-07 51.5 13.0 122 111-247 18-151 (294)
253 3qze_A DHDPS, dihydrodipicolin 96.8 0.017 5.9E-07 52.3 12.8 123 111-248 41-175 (314)
254 3cu2_A Ribulose-5-phosphate 3- 96.8 0.004 1.4E-07 54.3 8.1 144 104-271 16-232 (237)
255 4h83_A Mandelate racemase/muco 96.8 0.011 3.7E-07 55.2 11.7 148 111-284 163-320 (388)
256 3e96_A Dihydrodipicolinate syn 96.8 0.0093 3.2E-07 54.1 10.9 122 111-248 30-159 (316)
257 3na8_A Putative dihydrodipicol 96.7 0.015 5.3E-07 52.7 12.2 121 111-246 42-174 (315)
258 2yxg_A DHDPS, dihydrodipicolin 96.7 0.017 5.9E-07 51.6 12.4 122 111-247 18-151 (289)
259 3tak_A DHDPS, dihydrodipicolin 96.7 0.018 6.3E-07 51.5 12.6 123 111-248 19-153 (291)
260 1o5k_A DHDPS, dihydrodipicolin 96.7 0.017 5.7E-07 52.2 12.4 122 111-247 30-163 (306)
261 3fkr_A L-2-keto-3-deoxyarabona 96.7 0.014 4.9E-07 52.7 11.9 126 111-248 26-162 (309)
262 3s5o_A 4-hydroxy-2-oxoglutarat 96.7 0.02 6.7E-07 51.7 12.8 127 111-248 32-168 (307)
263 3cpr_A Dihydrodipicolinate syn 96.7 0.035 1.2E-06 50.0 14.4 123 111-248 34-168 (304)
264 2cu0_A Inosine-5'-monophosphat 96.7 0.0077 2.6E-07 57.9 10.7 95 156-259 255-362 (486)
265 3d0c_A Dihydrodipicolinate syn 96.7 0.013 4.5E-07 53.1 11.6 122 111-248 30-159 (314)
266 1oy0_A Ketopantoate hydroxymet 96.7 0.084 2.9E-06 46.9 16.4 160 40-236 40-222 (281)
267 3u9i_A Mandelate racemase/muco 96.7 0.019 6.5E-07 53.7 12.9 158 103-278 156-322 (393)
268 1m3u_A 3-methyl-2-oxobutanoate 96.7 0.065 2.2E-06 47.2 15.4 161 40-236 23-204 (264)
269 2pge_A MENC; OSBS, NYSGXRC, PS 96.7 0.02 7E-07 53.0 13.0 125 102-249 152-282 (377)
270 3b4u_A Dihydrodipicolinate syn 96.7 0.024 8.3E-07 50.8 13.1 122 111-247 21-158 (294)
271 3si9_A DHDPS, dihydrodipicolin 96.7 0.019 6.3E-07 52.1 12.3 123 111-248 40-174 (315)
272 2v9d_A YAGE; dihydrodipicolini 96.7 0.016 5.5E-07 53.2 12.0 122 111-247 49-182 (343)
273 1mxs_A KDPG aldolase; 2-keto-3 96.7 0.0065 2.2E-07 52.5 8.8 62 189-259 132-199 (225)
274 4h1z_A Enolase Q92ZS5; dehydra 96.7 0.02 6.8E-07 53.9 12.9 117 110-250 186-305 (412)
275 2rfg_A Dihydrodipicolinate syn 96.7 0.017 5.7E-07 52.0 11.9 123 111-248 18-152 (297)
276 2ze3_A DFA0005; organic waste 96.7 0.068 2.3E-06 47.4 15.6 130 101-250 76-225 (275)
277 1to3_A Putative aldolase YIHT; 96.6 0.0084 2.9E-07 54.2 9.6 122 124-260 119-260 (304)
278 3s5s_A Mandelate racemase/muco 96.6 0.019 6.4E-07 53.6 12.3 124 103-249 135-262 (389)
279 3daq_A DHDPS, dihydrodipicolin 96.6 0.021 7E-07 51.2 12.1 122 112-248 21-154 (292)
280 1wuf_A Hypothetical protein LI 96.6 0.017 5.9E-07 53.9 12.0 121 103-250 151-274 (393)
281 3vav_A 3-methyl-2-oxobutanoate 96.6 0.11 3.7E-06 46.0 16.2 161 40-236 35-216 (275)
282 3qfe_A Putative dihydrodipicol 96.6 0.023 7.8E-07 51.6 12.3 123 112-248 30-166 (318)
283 3nvt_A 3-deoxy-D-arabino-heptu 96.6 0.017 5.9E-07 53.8 11.7 178 20-234 129-317 (385)
284 2wkj_A N-acetylneuraminate lya 96.6 0.019 6.6E-07 51.7 11.8 123 111-248 29-164 (303)
285 3n9r_A Fructose-bisphosphate a 96.6 0.035 1.2E-06 49.9 13.2 124 100-237 73-213 (307)
286 3dz1_A Dihydrodipicolinate syn 96.6 0.042 1.4E-06 49.7 13.9 125 111-248 26-160 (313)
287 3m5v_A DHDPS, dihydrodipicolin 96.6 0.027 9.2E-07 50.7 12.5 123 111-248 25-160 (301)
288 3iv3_A Tagatose 1,6-diphosphat 96.6 0.0067 2.3E-07 55.3 8.5 149 121-278 117-309 (332)
289 2ojp_A DHDPS, dihydrodipicolin 96.6 0.018 6.1E-07 51.6 11.3 123 111-248 19-153 (292)
290 1f6k_A N-acetylneuraminate lya 96.6 0.043 1.5E-06 49.1 13.8 123 111-248 21-156 (293)
291 3ceu_A Thiamine phosphate pyro 96.5 0.0023 7.9E-08 54.5 4.8 69 189-259 101-177 (210)
292 2czd_A Orotidine 5'-phosphate 96.5 0.041 1.4E-06 46.6 12.6 140 104-261 2-192 (208)
293 1zlp_A PSR132, petal death pro 96.5 0.14 4.9E-06 46.2 16.7 186 31-234 38-231 (318)
294 2isw_A Putative fructose-1,6-b 96.5 0.026 8.9E-07 51.1 11.7 137 100-251 74-249 (323)
295 3a5f_A Dihydrodipicolinate syn 96.5 0.017 5.9E-07 51.7 10.5 122 111-247 19-152 (291)
296 3eoo_A Methylisocitrate lyase; 96.4 0.042 1.5E-06 49.3 12.8 122 101-234 83-213 (298)
297 2r91_A 2-keto-3-deoxy-(6-phosp 96.4 0.049 1.7E-06 48.5 13.3 119 111-245 16-145 (286)
298 2nuw_A 2-keto-3-deoxygluconate 96.4 0.046 1.6E-06 48.8 12.9 120 111-246 17-147 (288)
299 3eb2_A Putative dihydrodipicol 96.4 0.017 5.7E-07 52.1 9.9 122 111-247 22-155 (300)
300 3b8i_A PA4872 oxaloacetate dec 96.4 0.092 3.2E-06 46.8 14.5 188 26-233 15-209 (287)
301 1q6o_A Humps, 3-keto-L-gulonat 96.4 0.053 1.8E-06 46.1 12.5 134 102-261 57-198 (216)
302 2ozt_A TLR1174 protein; struct 96.3 0.078 2.7E-06 48.2 14.3 117 111-250 115-237 (332)
303 3lab_A Putative KDPG (2-keto-3 96.3 0.024 8.3E-07 48.5 10.0 74 170-251 13-86 (217)
304 1yxy_A Putative N-acetylmannos 96.3 0.038 1.3E-06 47.4 11.4 126 100-251 16-154 (234)
305 1zfj_A Inosine monophosphate d 96.2 0.08 2.7E-06 50.7 14.4 63 184-251 233-296 (491)
306 1w3i_A EDA, 2-keto-3-deoxy glu 96.2 0.054 1.9E-06 48.5 12.4 119 111-245 17-146 (293)
307 1s2w_A Phosphoenolpyruvate pho 96.2 0.22 7.5E-06 44.6 16.1 186 30-235 17-216 (295)
308 2wqp_A Polysialic acid capsule 96.2 0.13 4.3E-06 47.2 14.7 203 22-251 7-230 (349)
309 3h5d_A DHDPS, dihydrodipicolin 96.2 0.049 1.7E-06 49.2 11.9 122 112-248 26-160 (311)
310 1twd_A Copper homeostasis prot 96.1 0.031 1.1E-06 48.9 9.5 71 125-208 20-98 (256)
311 3kts_A Glycerol uptake operon 96.0 0.018 6.2E-07 48.3 7.5 71 181-260 112-185 (192)
312 3lye_A Oxaloacetate acetyl hyd 96.0 0.22 7.6E-06 44.8 15.2 123 101-234 88-221 (307)
313 3vdg_A Probable glucarate dehy 96.0 0.072 2.5E-06 50.6 12.4 113 111-249 192-307 (445)
314 3khj_A Inosine-5-monophosphate 95.9 0.031 1.1E-06 51.6 9.4 89 153-251 79-167 (361)
315 3va8_A Probable dehydratase; e 95.9 0.068 2.3E-06 50.7 11.9 113 111-249 190-305 (445)
316 3ru6_A Orotidine 5'-phosphate 95.9 0.26 9E-06 44.2 14.9 149 101-278 76-256 (303)
317 3exr_A RMPD (hexulose-6-phosph 95.9 0.034 1.2E-06 47.7 8.8 136 101-260 58-202 (221)
318 3o1n_A 3-dehydroquinate dehydr 95.8 0.11 3.8E-06 46.1 12.2 90 103-203 41-140 (276)
319 3fok_A Uncharacterized protein 95.8 0.18 6.3E-06 45.1 13.4 114 124-261 139-280 (307)
320 1qap_A Quinolinic acid phospho 95.8 0.035 1.2E-06 49.9 8.8 84 157-258 195-284 (296)
321 3ijl_A Muconate cycloisomerase 95.7 0.097 3.3E-06 47.7 11.8 113 108-246 130-243 (338)
322 3qld_A Mandelate racemase/muco 95.7 0.15 5.1E-06 47.4 13.2 121 102-249 138-261 (388)
323 2qiw_A PEP phosphonomutase; st 95.7 0.46 1.6E-05 41.6 15.5 170 39-234 25-210 (255)
324 3nl6_A Thiamine biosynthetic b 95.7 0.021 7.2E-07 55.6 7.5 91 187-278 119-235 (540)
325 4e38_A Keto-hydroxyglutarate-a 95.7 0.12 4.2E-06 44.6 11.5 82 159-251 26-107 (232)
326 2hmc_A AGR_L_411P, dihydrodipi 95.7 0.12 4E-06 47.4 12.1 120 111-246 44-174 (344)
327 4h2h_A Mandelate racemase/muco 95.7 0.19 6.5E-06 46.4 13.7 149 101-279 139-298 (376)
328 2yci_X 5-methyltetrahydrofolat 95.6 0.075 2.6E-06 47.1 10.3 94 114-234 34-131 (271)
329 1ypf_A GMP reductase; GUAC, pu 95.5 0.067 2.3E-06 48.8 10.0 89 155-251 81-171 (336)
330 3vc5_A Mandelate racemase/muco 95.5 0.13 4.5E-06 48.7 12.2 113 111-249 187-302 (441)
331 3mzn_A Glucarate dehydratase; 95.5 0.2 6.9E-06 47.5 13.4 144 111-281 181-336 (450)
332 3iwp_A Copper homeostasis prot 95.4 0.09 3.1E-06 46.7 10.0 89 103-207 39-135 (287)
333 3cyj_A Mandelate racemase/muco 95.4 0.36 1.2E-05 44.4 14.7 149 102-278 132-293 (372)
334 2bdq_A Copper homeostasis prot 95.4 0.049 1.7E-06 46.7 7.9 73 122-207 16-100 (224)
335 3p0w_A Mandelate racemase/muco 95.3 0.17 5.9E-06 48.3 12.5 145 110-281 198-354 (470)
336 2b7n_A Probable nicotinate-nuc 95.3 0.03 1E-06 49.7 6.7 86 158-261 169-264 (273)
337 3fa4_A 2,3-dimethylmalate lyas 95.3 0.43 1.5E-05 42.8 14.2 122 101-234 80-213 (302)
338 4h3d_A 3-dehydroquinate dehydr 95.3 0.25 8.4E-06 43.3 12.4 92 101-203 18-120 (258)
339 2wqp_A Polysialic acid capsule 95.3 0.46 1.6E-05 43.5 14.5 132 104-251 22-171 (349)
340 1vc4_A Indole-3-glycerol phosp 95.2 0.15 5.2E-06 44.6 10.9 92 162-258 39-139 (254)
341 3q58_A N-acetylmannosamine-6-p 95.2 0.55 1.9E-05 40.3 14.3 113 112-254 34-154 (229)
342 3tsm_A IGPS, indole-3-glycerol 95.2 0.088 3E-06 46.6 9.1 96 183-285 79-179 (272)
343 1wue_A Mandelate racemase/muco 95.2 0.14 4.8E-06 47.5 11.1 120 103-249 151-273 (386)
344 2opj_A O-succinylbenzoate-COA 95.1 0.076 2.6E-06 48.3 8.9 122 102-248 70-193 (327)
345 1vkf_A Glycerol uptake operon 95.0 0.017 5.9E-07 48.2 3.8 87 157-251 45-171 (188)
346 1vli_A Spore coat polysacchari 95.0 0.48 1.6E-05 43.9 13.8 133 103-251 30-181 (385)
347 3elf_A Fructose-bisphosphate a 94.9 0.45 1.5E-05 43.5 13.1 142 98-251 84-270 (349)
348 4adt_A Pyridoxine biosynthetic 94.8 0.078 2.7E-06 47.6 8.0 66 186-251 31-101 (297)
349 2h6r_A Triosephosphate isomera 94.8 0.33 1.1E-05 41.4 11.6 121 121-262 76-207 (219)
350 2ftp_A Hydroxymethylglutaryl-C 94.8 0.27 9.3E-06 44.0 11.6 133 111-251 84-229 (302)
351 3pfr_A Mandelate racemase/muco 94.8 0.27 9.2E-06 46.7 12.1 144 111-281 184-339 (455)
352 2yr1_A 3-dehydroquinate dehydr 94.8 0.37 1.3E-05 42.2 12.1 91 103-204 21-122 (257)
353 1zco_A 2-dehydro-3-deoxyphosph 94.8 0.71 2.4E-05 40.5 14.0 125 103-249 24-152 (262)
354 1gox_A (S)-2-hydroxy-acid oxid 94.8 0.33 1.1E-05 44.8 12.4 89 162-251 115-247 (370)
355 3g8r_A Probable spore coat pol 94.7 0.29 9.8E-06 44.8 11.5 116 93-234 83-200 (350)
356 4g8t_A Glucarate dehydratase; 94.7 0.32 1.1E-05 46.3 12.3 144 112-281 202-356 (464)
357 1vr6_A Phospho-2-dehydro-3-deo 94.6 0.51 1.7E-05 43.2 12.8 82 147-233 196-280 (350)
358 1sfl_A 3-dehydroquinate dehydr 94.6 0.22 7.7E-06 43.0 10.0 90 103-204 5-105 (238)
359 2jbm_A Nicotinate-nucleotide p 94.5 0.047 1.6E-06 49.1 5.8 84 158-259 184-277 (299)
360 2h9a_B CO dehydrogenase/acetyl 94.5 1 3.5E-05 40.5 14.5 118 122-261 83-208 (310)
361 3g8r_A Probable spore coat pol 94.5 1.3 4.4E-05 40.5 15.3 76 161-251 83-158 (350)
362 3ekg_A Mandelate racemase/muco 94.4 0.32 1.1E-05 45.5 11.4 137 124-280 172-318 (404)
363 1o4u_A Type II quinolic acid p 94.3 0.077 2.6E-06 47.3 6.6 87 157-261 179-275 (285)
364 1nsj_A PRAI, phosphoribosyl an 94.3 0.45 1.5E-05 40.2 11.1 118 110-258 62-184 (205)
365 3pm6_A Putative fructose-bisph 94.3 0.46 1.6E-05 42.6 11.5 136 100-251 81-245 (306)
366 2ekc_A AQ_1548, tryptophan syn 94.3 0.38 1.3E-05 42.1 11.0 118 157-278 4-149 (262)
367 1x1o_A Nicotinate-nucleotide p 94.2 0.19 6.5E-06 44.8 9.0 84 158-259 183-273 (286)
368 3igs_A N-acetylmannosamine-6-p 94.2 0.53 1.8E-05 40.5 11.6 109 155-278 5-131 (232)
369 1ydn_A Hydroxymethylglutaryl-C 94.2 0.45 1.5E-05 42.3 11.5 124 124-251 90-225 (295)
370 4dpp_A DHDPS 2, dihydrodipicol 94.2 0.96 3.3E-05 41.6 13.8 120 111-247 77-208 (360)
371 1dos_A Aldolase class II; lyas 94.2 1.4 4.7E-05 40.4 14.8 140 100-251 100-282 (358)
372 1aj0_A DHPS, dihydropteroate s 94.1 0.31 1.1E-05 43.3 10.0 102 112-234 36-139 (282)
373 3v5c_A Mandelate racemase/muco 94.0 0.29 1E-05 45.5 10.3 151 113-280 149-309 (392)
374 1zco_A 2-dehydro-3-deoxyphosph 94.0 0.87 3E-05 39.9 12.7 178 21-233 12-197 (262)
375 3c2e_A Nicotinate-nucleotide p 93.8 0.047 1.6E-06 48.9 4.2 87 157-261 185-284 (294)
376 1vs1_A 3-deoxy-7-phosphoheptul 93.7 0.51 1.7E-05 41.8 10.7 177 20-233 25-212 (276)
377 1tx2_A DHPS, dihydropteroate s 93.7 0.38 1.3E-05 43.0 10.0 77 114-201 63-140 (297)
378 1qwg_A PSL synthase;, (2R)-pho 93.7 1.7 5.7E-05 37.7 13.6 118 115-248 86-217 (251)
379 3r2g_A Inosine 5'-monophosphat 93.7 0.19 6.4E-06 46.3 8.0 64 183-251 99-163 (361)
380 4aaj_A N-(5'-phosphoribosyl)an 93.5 0.84 2.9E-05 39.2 11.5 116 104-249 73-193 (228)
381 3f4w_A Putative hexulose 6 pho 93.5 1.3 4.4E-05 36.9 12.6 121 103-251 2-128 (211)
382 1vr6_A Phospho-2-dehydro-3-deo 93.5 1.3 4.6E-05 40.4 13.4 118 111-250 117-236 (350)
383 2v82_A 2-dehydro-3-deoxy-6-pho 93.5 0.39 1.3E-05 40.3 9.3 75 169-251 6-81 (212)
384 1vs1_A 3-deoxy-7-phosphoheptul 93.4 1.8 6.2E-05 38.2 13.8 125 104-250 41-168 (276)
385 3vnd_A TSA, tryptophan synthas 93.4 0.33 1.1E-05 42.7 8.9 121 156-278 4-150 (267)
386 4fo4_A Inosine 5'-monophosphat 93.3 0.23 7.8E-06 45.9 8.0 91 153-251 80-171 (366)
387 1o60_A 2-dehydro-3-deoxyphosph 93.3 1.6 5.4E-05 38.9 13.2 110 98-233 86-198 (292)
388 2pcq_A Putative dihydrodipicol 93.3 0.41 1.4E-05 42.4 9.4 121 111-248 16-144 (283)
389 1f6y_A 5-methyltetrahydrofolat 93.2 0.49 1.7E-05 41.5 9.7 96 112-234 23-122 (262)
390 3fs2_A 2-dehydro-3-deoxyphosph 93.1 0.98 3.3E-05 40.3 11.5 176 21-233 28-219 (298)
391 3iwp_A Copper homeostasis prot 93.1 1.4 4.6E-05 39.1 12.3 121 111-251 105-232 (287)
392 3ajx_A 3-hexulose-6-phosphate 92.9 0.32 1.1E-05 40.6 7.8 82 103-205 2-86 (207)
393 3vav_A 3-methyl-2-oxobutanoate 92.9 1.4 4.8E-05 38.9 12.0 114 105-234 31-148 (275)
394 3qja_A IGPS, indole-3-glycerol 92.9 0.25 8.4E-06 43.7 7.3 89 184-278 73-164 (272)
395 1v5x_A PRA isomerase, phosphor 92.6 0.6 2E-05 39.3 9.0 115 110-258 61-178 (203)
396 3sgz_A Hydroxyacid oxidase 2; 92.6 1 3.5E-05 41.2 11.1 81 170-251 122-239 (352)
397 1qop_A Tryptophan synthase alp 92.4 0.57 2E-05 41.0 9.1 119 157-278 4-149 (268)
398 3nav_A Tryptophan synthase alp 92.3 0.48 1.6E-05 41.8 8.3 121 156-278 6-152 (271)
399 2gjl_A Hypothetical protein PA 92.2 0.68 2.3E-05 41.7 9.6 87 153-251 51-139 (328)
400 1vqt_A Orotidine 5'-phosphate 92.2 0.93 3.2E-05 38.4 9.8 124 100-261 57-199 (213)
401 1h1y_A D-ribulose-5-phosphate 92.0 0.51 1.8E-05 40.2 8.1 126 101-248 6-134 (228)
402 3sz8_A 2-dehydro-3-deoxyphosph 92.0 0.78 2.7E-05 40.7 9.4 112 96-233 86-200 (285)
403 4dbe_A Orotidine 5'-phosphate 92.0 1.2 4E-05 38.1 10.3 135 101-261 52-196 (222)
404 2dqw_A Dihydropteroate synthas 91.9 0.9 3.1E-05 40.5 9.7 93 121-235 60-153 (294)
405 3tr9_A Dihydropteroate synthas 91.9 0.4 1.4E-05 43.2 7.4 66 112-177 47-113 (314)
406 2nli_A Lactate oxidase; flavoe 91.8 2.1 7.1E-05 39.4 12.4 92 169-261 132-268 (368)
407 1eix_A Orotidine 5'-monophosph 91.7 1.2 4E-05 38.5 10.1 82 102-204 15-100 (245)
408 3fxg_A Rhamnonate dehydratase; 91.7 1.1 3.8E-05 42.5 10.6 138 124-281 178-324 (455)
409 3nvt_A 3-deoxy-D-arabino-heptu 91.7 3.9 0.00013 37.8 14.1 118 111-250 153-272 (385)
410 3paj_A Nicotinate-nucleotide p 91.6 0.93 3.2E-05 40.9 9.5 81 158-256 219-305 (320)
411 1kbi_A Cytochrome B2, L-LCR; f 91.4 2.7 9.3E-05 40.4 13.2 106 169-275 246-398 (511)
412 1jub_A Dihydroorotate dehydrog 91.2 3 0.0001 37.0 12.6 89 155-245 77-176 (311)
413 1y0e_A Putative N-acetylmannos 91.2 1.7 5.8E-05 36.5 10.4 69 181-261 21-102 (223)
414 3qm3_A Fructose-bisphosphate a 91.1 4.8 0.00016 36.8 13.8 140 100-251 98-281 (357)
415 2zbt_A Pyridoxal biosynthesis 90.9 0.57 1.9E-05 41.6 7.4 78 167-251 19-101 (297)
416 1nvm_A HOA, 4-hydroxy-2-oxoval 90.9 2.5 8.4E-05 38.4 11.8 123 106-251 85-220 (345)
417 1to3_A Putative aldolase YIHT; 90.9 0.89 3E-05 40.7 8.7 95 95-202 149-253 (304)
418 4hb7_A Dihydropteroate synthas 90.8 1.3 4.6E-05 38.8 9.5 77 113-201 29-106 (270)
419 1qpo_A Quinolinate acid phosph 90.8 0.9 3.1E-05 40.3 8.5 89 158-261 182-276 (284)
420 2yyu_A Orotidine 5'-phosphate 90.8 7.2 0.00025 33.4 15.0 132 102-262 56-223 (246)
421 4djd_D C/Fe-SP, corrinoid/iron 90.7 3.3 0.00011 37.4 12.3 128 116-261 82-215 (323)
422 3tqv_A Nicotinate-nucleotide p 90.6 0.85 2.9E-05 40.5 8.1 82 157-256 185-272 (287)
423 2bdq_A Copper homeostasis prot 90.6 5.7 0.00019 33.8 12.9 133 101-251 54-201 (224)
424 2yyu_A Orotidine 5'-phosphate 90.5 1.6 5.3E-05 37.7 9.7 110 103-239 6-125 (246)
425 2qkf_A 3-deoxy-D-manno-octulos 90.5 1.3 4.5E-05 39.1 9.3 81 147-233 112-195 (280)
426 3bo9_A Putative nitroalkan dio 90.5 1.8 6.1E-05 39.0 10.4 85 153-251 61-145 (326)
427 1w0m_A TIM, triosephosphate is 90.4 2.9 0.0001 35.7 11.2 131 122-273 80-223 (226)
428 2z6i_A Trans-2-enoyl-ACP reduc 90.4 1.5 5E-05 39.7 9.8 85 153-251 47-131 (332)
429 3l9c_A 3-dehydroquinate dehydr 90.3 0.89 3E-05 39.8 8.0 87 102-203 35-130 (259)
430 3p6l_A Sugar phosphate isomera 90.3 2.9 9.8E-05 35.6 11.3 135 101-248 9-153 (262)
431 1dbt_A Orotidine 5'-phosphate 90.3 1.3 4.5E-05 38.0 9.0 81 103-204 5-89 (239)
432 1jpd_X L-Ala-D/L-Glu epimerase 90.2 1.1 3.6E-05 40.4 8.7 114 107-248 127-242 (324)
433 2p3z_A L-rhamnonate dehydratas 90.2 2.1 7.3E-05 40.0 11.0 117 154-281 205-330 (415)
434 2vef_A Dihydropteroate synthas 90.1 0.73 2.5E-05 41.5 7.4 62 112-177 31-93 (314)
435 3k13_A 5-methyltetrahydrofolat 89.9 1.7 5.6E-05 38.9 9.5 53 113-177 36-92 (300)
436 3gnn_A Nicotinate-nucleotide p 89.9 1.1 3.6E-05 40.1 8.2 86 158-261 197-288 (298)
437 3lmz_A Putative sugar isomeras 89.9 6 0.0002 33.6 13.0 92 101-204 17-110 (257)
438 3noy_A 4-hydroxy-3-methylbut-2 89.9 8.9 0.0003 34.9 14.3 168 21-233 18-209 (366)
439 4aaj_A N-(5'-phosphoribosyl)an 89.9 2.7 9.1E-05 36.0 10.5 102 101-234 18-121 (228)
440 3l0g_A Nicotinate-nucleotide p 89.8 1.6 5.3E-05 39.0 9.1 83 158-258 195-283 (300)
441 1wa3_A 2-keto-3-deoxy-6-phosph 89.6 1.4 4.7E-05 36.6 8.4 74 170-251 10-84 (205)
442 2egz_A 3-dehydroquinate dehydr 89.6 3 0.0001 35.3 10.6 84 104-203 3-90 (219)
443 1eix_A Orotidine 5'-monophosph 89.6 8.6 0.00029 32.9 13.7 131 102-262 66-229 (245)
444 1p0k_A Isopentenyl-diphosphate 89.6 2.3 7.8E-05 38.6 10.4 82 167-251 114-203 (349)
445 3tfx_A Orotidine 5'-phosphate 89.5 7.5 0.00026 33.8 13.3 160 101-289 56-254 (259)
446 2ze3_A DFA0005; organic waste 89.5 4.5 0.00015 35.6 11.9 116 120-239 29-154 (275)
447 1qwg_A PSL synthase;, (2R)-pho 89.4 7.5 0.00026 33.6 12.9 149 110-278 22-200 (251)
448 1rd5_A Tryptophan synthase alp 89.3 1.7 5.9E-05 37.6 9.1 79 157-235 5-101 (262)
449 3ih1_A Methylisocitrate lyase; 89.3 4.4 0.00015 36.3 11.8 88 105-206 31-127 (305)
450 4avf_A Inosine-5'-monophosphat 89.1 0.45 1.5E-05 45.6 5.5 64 183-251 228-292 (490)
451 2okt_A OSB synthetase, O-succi 89.1 1.8 6.3E-05 39.1 9.5 114 103-249 121-235 (342)
452 3noy_A 4-hydroxy-3-methylbut-2 89.1 2.7 9.4E-05 38.3 10.3 110 100-237 28-144 (366)
453 2vp8_A Dihydropteroate synthas 89.1 0.79 2.7E-05 41.4 6.8 76 114-201 65-142 (318)
454 3vkj_A Isopentenyl-diphosphate 89.0 0.51 1.7E-05 43.5 5.6 81 168-251 118-212 (368)
455 2nzl_A Hydroxyacid oxidase 1; 89.0 2.5 8.5E-05 39.2 10.4 92 169-261 146-291 (392)
456 1o66_A 3-methyl-2-oxobutanoate 89.0 3 0.0001 36.7 10.3 113 106-234 20-137 (275)
457 3ffs_A Inosine-5-monophosphate 89.0 0.77 2.6E-05 42.8 6.8 61 186-251 146-206 (400)
458 2fiq_A Putative tagatose 6-pho 88.9 1.2 4E-05 41.8 8.0 71 181-251 189-275 (420)
459 1m3u_A 3-methyl-2-oxobutanoate 88.9 3.6 0.00012 36.0 10.7 112 106-233 20-135 (264)
460 1eye_A DHPS 1, dihydropteroate 88.8 1.9 6.6E-05 38.1 9.0 61 112-177 27-88 (280)
461 4ef8_A Dihydroorotate dehydrog 88.8 1.9 6.6E-05 39.4 9.3 81 167-248 124-214 (354)
462 1hg3_A Triosephosphate isomera 88.7 6.4 0.00022 33.5 12.0 122 122-264 83-215 (225)
463 1wbh_A KHG/KDPG aldolase; lyas 88.7 3.5 0.00012 34.8 10.3 81 160-251 9-89 (214)
464 3m47_A Orotidine 5'-phosphate 88.7 2.1 7E-05 36.6 8.9 85 102-204 13-99 (228)
465 1kko_A 3-methylaspartate ammon 88.6 2.1 7.1E-05 39.9 9.7 117 157-279 218-355 (413)
466 1vhc_A Putative KHG/KDPG aldol 88.6 5 0.00017 34.1 11.3 81 160-251 10-90 (224)
467 4fxs_A Inosine-5'-monophosphat 88.6 0.59 2E-05 44.9 5.9 64 183-251 230-294 (496)
468 1jcn_A Inosine monophosphate d 88.5 0.57 1.9E-05 45.1 5.8 63 184-251 255-318 (514)
469 1ydo_A HMG-COA lyase; TIM-barr 88.5 1.9 6.6E-05 38.5 9.0 132 111-251 82-227 (307)
470 1r6w_A OSB synthase, O-succiny 88.3 1.5 5E-05 39.4 8.1 104 110-239 113-220 (322)
471 1twd_A Copper homeostasis prot 88.3 9.7 0.00033 33.0 12.9 122 110-251 66-192 (256)
472 1lt8_A Betaine-homocysteine me 88.2 1.9 6.6E-05 40.2 9.0 111 51-201 149-297 (406)
473 3tml_A 2-dehydro-3-deoxyphosph 88.2 1.4 4.7E-05 39.2 7.6 111 96-233 83-201 (288)
474 3eeg_A 2-isopropylmalate synth 88.2 2.6 8.8E-05 38.1 9.6 141 106-251 72-224 (325)
475 2cw6_A Hydroxymethylglutaryl-C 88.1 1.2 4.1E-05 39.6 7.3 112 116-231 83-203 (298)
476 3o07_A Pyridoxine biosynthesis 88.1 1.2 4.1E-05 39.3 7.0 67 185-251 20-91 (291)
477 3tqp_A Enolase; energy metabol 88.0 3.5 0.00012 38.7 10.7 90 152-249 216-328 (428)
478 3l21_A DHDPS, dihydrodipicolin 88.0 2.2 7.4E-05 38.1 9.0 82 180-261 33-124 (304)
479 3chv_A Prokaryotic domain of u 87.9 0.48 1.7E-05 42.1 4.5 103 181-283 32-151 (284)
480 2nx9_A Oxaloacetate decarboxyl 87.9 6.7 0.00023 37.2 12.6 89 100-203 139-233 (464)
481 3e49_A Uncharacterized protein 87.8 0.66 2.3E-05 41.7 5.4 57 181-237 30-90 (311)
482 1m5w_A Pyridoxal phosphate bio 87.6 3.1 0.00011 35.8 9.1 95 144-246 103-203 (243)
483 2ocz_A 3-dehydroquinate dehydr 87.6 1.6 5.6E-05 37.3 7.6 86 103-203 5-99 (231)
484 2y7e_A 3-keto-5-aminohexanoate 87.6 0.68 2.3E-05 41.1 5.2 99 180-278 31-145 (282)
485 2y5s_A DHPS, dihydropteroate s 87.5 1.8 6.1E-05 38.6 8.0 77 113-201 45-122 (294)
486 1w8s_A FBP aldolase, fructose- 87.3 1.9 6.5E-05 37.6 8.0 82 99-202 136-230 (263)
487 2yxg_A DHDPS, dihydrodipicolin 87.2 2.1 7.1E-05 37.9 8.3 82 180-261 18-109 (289)
488 1xky_A Dihydrodipicolinate syn 87.2 2.6 9E-05 37.5 9.0 82 180-261 30-121 (301)
489 3cpr_A Dihydrodipicolinate syn 87.2 3.7 0.00013 36.5 10.0 82 180-261 34-125 (304)
490 1u83_A Phosphosulfolactate syn 87.1 1.7 5.8E-05 38.2 7.3 97 115-228 111-222 (276)
491 2wkj_A N-acetylneuraminate lya 87.0 2.7 9.1E-05 37.5 8.9 82 180-261 29-120 (303)
492 3ble_A Citramalate synthase fr 87.0 1.3 4.4E-05 40.2 6.9 106 120-231 102-216 (337)
493 3b4u_A Dihydrodipicolinate syn 86.8 2.9 9.7E-05 37.1 9.0 81 180-260 21-111 (294)
494 2ojp_A DHDPS, dihydrodipicolin 86.7 2.6 9E-05 37.3 8.7 69 180-248 19-90 (292)
495 2ehh_A DHDPS, dihydrodipicolin 86.7 2.1 7.2E-05 38.0 8.0 82 180-261 18-109 (294)
496 1o5k_A DHDPS, dihydrodipicolin 86.7 2 7E-05 38.3 8.0 82 180-261 30-121 (306)
497 3nwr_A A rubisco-like protein; 86.7 4.7 0.00016 37.8 10.6 97 99-203 158-261 (432)
498 3m47_A Orotidine 5'-phosphate 86.7 14 0.00047 31.3 13.6 132 101-261 64-209 (228)
499 3flu_A DHDPS, dihydrodipicolin 86.5 3 0.0001 37.0 9.0 82 180-261 25-116 (297)
500 3s5o_A 4-hydroxy-2-oxoglutarat 86.3 1.9 6.5E-05 38.5 7.6 69 180-248 32-103 (307)
No 1
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=100.00 E-value=1.5e-41 Score=313.87 Aligned_cols=221 Identities=23% Similarity=0.300 Sum_probs=192.6
Q ss_pred cccCCceEEccCCCCCCHHHHHHHHHcCCCEEEecceechhhhhhhhhhhcccccccccCCCCCceeeecCCCCCCceEE
Q psy4398 27 INYSNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDGSVVFRTCPREKNKIIL 106 (306)
Q Consensus 27 l~l~n~i~lAPm~~~t~~~~r~~~~~~G~g~~~te~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~iv 106 (306)
++++||+++|||+++|+.+||.+++++|+|+++|||+++.+.....+.. ++.+ .++.+.|+++
T Consensus 1 ~~l~nri~~APM~~~t~~~~r~~~~~~G~gli~te~~~~~~~~~~~~~~--------------~~~l---~~~~~~~~~~ 63 (318)
T 1vhn_A 1 MSLEVKVGLAPMAGYTDSAFRTLAFEWGADFAFSEMVSAKGFLMNSQKT--------------EELL---PQPHERNVAV 63 (318)
T ss_dssp ----CEEEECCCTTTCSHHHHHHHHTTTCCCEECSCEEHHHHHTTCHHH--------------HHHS---CCTTCTTEEE
T ss_pred CccCCCEEECCCCCCCcHHHHHHHHHHCcCEEEeCCEEEcccccCCHhH--------------HHhh---hCcCCCeEEE
Confidence 4689999999999999999999998899999999999887754432211 1112 3346789999
Q ss_pred EecCCCHHHHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEeccCCChHHHH
Q psy4398 107 QIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFHNEADTI 186 (306)
Q Consensus 107 ql~g~~~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~ 186 (306)
||+|.++++|+++|+++++.||+||||++||+++.++++||++++++++++.++++++++.+++||+||+|.|++.++..
T Consensus 64 QL~g~~~~~~~~aa~~a~~~~d~Iein~gcP~~~~r~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~G~~~~~~~ 143 (318)
T 1vhn_A 64 QIFGSEPNELSEAARILSEKYKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSVSGKFSVKTRLGWEKNEVE 143 (318)
T ss_dssp EEECSCHHHHHHHHHHHTTTCSEEEEEECCCCHHHHHTTCGGGGGSCHHHHHHHHHHHHHHCSSEEEEEEESCSSSCCHH
T ss_pred EeCCCCHHHHHHHHHHHHHhCCEEEEECCCCcHhcCCCCcccchhhCHHHHHHHHHHHHHhhCCCEEEEecCCCChHHHH
Confidence 99999999999999999744999999999999999999999999999999999999999999999999999998877777
Q ss_pred HHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHh----hhhhccccCCCCC
Q psy4398 187 ALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSL----NCAFLRNHYPVEK 262 (306)
Q Consensus 187 ~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~----~v~vGrall~~p~ 262 (306)
++++.++++|+|+|++|+++..+.+.++.+|++++++++ ++|||++|||+|.+++.++++. +|++||+++.||+
T Consensus 144 ~~a~~l~~~G~d~i~v~g~~~~~~~~~~~~~~~i~~i~~--~ipVi~~GgI~s~~da~~~l~~~gad~V~iGR~~l~~P~ 221 (318)
T 1vhn_A 144 EIYRILVEEGVDEVFIHTRTVVQSFTGRAEWKALSVLEK--RIPTFVSGDIFTPEDAKRALEESGCDGLLVARGAIGRPW 221 (318)
T ss_dssp HHHHHHHHTTCCEEEEESSCTTTTTSSCCCGGGGGGSCC--SSCEEEESSCCSHHHHHHHHHHHCCSEEEESGGGTTCTT
T ss_pred HHHHHHHHhCCCEEEEcCCCccccCCCCcCHHHHHHHHc--CCeEEEECCcCCHHHHHHHHHcCCCCEEEECHHHHhCcc
Confidence 999999999999999999988777777788999999988 8999999999999999999984 4699999999997
Q ss_pred chHH
Q psy4398 263 LPKT 266 (306)
Q Consensus 263 ~~~~ 266 (306)
+...
T Consensus 222 l~~~ 225 (318)
T 1vhn_A 222 IFKQ 225 (318)
T ss_dssp HHHH
T ss_pred hHHH
Confidence 7654
No 2
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=100.00 E-value=2.9e-40 Score=308.71 Aligned_cols=220 Identities=23% Similarity=0.337 Sum_probs=187.6
Q ss_pred ccCCceEEccCCCCCCHHHHHHHHHcC-CCEEEecceechhhhhhhhhhhcccccccccCCCCCceeeecCCCCCCceEE
Q psy4398 28 NYSNKIILAPMVRMNTLPFRLLALDYG-ADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDGSVVFRTCPREKNKIIL 106 (306)
Q Consensus 28 ~l~n~i~lAPm~~~t~~~~r~~~~~~G-~g~~~te~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~iv 106 (306)
.|+|||++|||.++|+.+||.++++.| +|+++|||+++++....... .+.+ ++..+.|+++
T Consensus 1 ~l~nriv~APM~g~td~~~r~~~r~~Gg~gli~te~~~~~~~~~~~~~-----------------~~~~-~~~~~~p~~v 62 (350)
T 3b0p_A 1 MLDPRLSVAPMVDRTDRHFRFLVRQVSLGVRLYTEMTVDQAVLRGNRE-----------------RLLA-FRPEEHPIAL 62 (350)
T ss_dssp -CCCSEEECCCTTTSSHHHHHHHHHHCSSSBEECCCEEHHHHHHSCHH-----------------HHHC-CCGGGCSEEE
T ss_pred CCCCCEEECCCCCCCHHHHHHHHHHcCCCCEEEeCCEEechhhcCCHH-----------------HHhc-cCCCCCeEEE
Confidence 379999999999999999999987776 59999999998765432211 1112 2235679999
Q ss_pred EecCCCHHHHHHHHHHHhc-CCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEeccCCCh---
Q psy4398 107 QIGTADPERALEAAKKVEH-DVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFHNE--- 182 (306)
Q Consensus 107 ql~g~~~~~~~~aa~~~~~-g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~--- 182 (306)
||+|.++++|+++|+++++ |||+||||++||.+|.++++||++++++++++.++++++++.+++||++|+|.|++.
T Consensus 63 QL~g~~p~~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~~PV~vKiR~g~~~~~~ 142 (350)
T 3b0p_A 63 QLAGSDPKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRLGLEGKET 142 (350)
T ss_dssp EEECSCHHHHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCSSCEEEEEESCBTTCCC
T ss_pred EeCCCCHHHHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhCCceEEEEecCcCcccc
Confidence 9999999999999999975 999999999999999999999999999999999999999999999999999987653
Q ss_pred -HHHHHHHHHHHHcCCcEEEEcccCCCCCCC-------CCCcHHHHHHHHhhC-CCcEEEecCCCCHHHHHHHHH--hhh
Q psy4398 183 -ADTIALCKRLEACGIIAIGVHGRTKAERPR-------HRNRIEMIRTLTQHL-KIPVIANGGSKEIVDYGGVFS--LNC 251 (306)
Q Consensus 183 -~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~-------~p~~~~~v~~i~~~~-~ipvia~GGI~s~~~~~~~l~--~~v 251 (306)
+++.++++.++++|+|+|++|+++..+.+. .+.+|++++++++.+ ++|||+||||.|.++++++++ .+|
T Consensus 143 ~~~~~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~~~iPVianGgI~s~eda~~~l~GaD~V 222 (350)
T 3b0p_A 143 YRGLAQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFPQLTFVTNGGIRSLEEALFHLKRVDGV 222 (350)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECSCBC----------CCCCCHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHTTSSEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHhCCCCeEEEECCcCCHHHHHHHHhCCCEE
Confidence 468999999999999999999987643332 246899999999999 999999999999999999997 245
Q ss_pred hhccccCCCCCchH
Q psy4398 252 AFLRNHYPVEKLPK 265 (306)
Q Consensus 252 ~vGrall~~p~~~~ 265 (306)
++||+++.||++..
T Consensus 223 ~iGRa~l~~P~l~~ 236 (350)
T 3b0p_A 223 MLGRAVYEDPFVLE 236 (350)
T ss_dssp EECHHHHHCGGGGT
T ss_pred EECHHHHhCcHHHH
Confidence 99999999995554
No 3
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=100.00 E-value=4e-39 Score=299.85 Aligned_cols=248 Identities=12% Similarity=0.104 Sum_probs=198.8
Q ss_pred ccccccccccCCceEEccCCCCCC---------HH---HHHHHHHcCCCEEEecceechhhhhhhhhhhcccccccccCC
Q psy4398 20 ANANQANINYSNKIILAPMVRMNT---------LP---FRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDP 87 (306)
Q Consensus 20 ~~~~~~~l~l~n~i~lAPm~~~t~---------~~---~r~~~~~~G~g~~~te~~~~~~~~~~~~~~~~~l~~~~~~~~ 87 (306)
.|+++++++|+|||++|||++.+. .. |+..+ ++|+|+++||++.+.+.........+++++ ..+..
T Consensus 7 ~p~~ig~~~l~NRiv~aPm~~~~~~~~~g~~~~~~~~~y~~rA-~gG~gliite~~~v~~~g~~~~~~~~i~~d-~~~~~ 84 (338)
T 1z41_A 7 TPITIKDMTLKNRIVMSPMCMYSSHEKDGKLTPFHMAHYISRA-IGQVGLIIVEASAVNPQGRITDQDLGIWSD-EHIEG 84 (338)
T ss_dssp SCEEETTEEESSSEEECCCCCCCCTTSSSCCCHHHHHHHHHHH-HTTCSEEEEEEEESSGGGCSSTTSCBCSST-HHHHH
T ss_pred CCeeECCEEEcCccEECCcCCCcCCCCCCCCCHHHHHHHHHHH-cCCCCEEEeCCeeccccccCCCCCcccCCH-HHHHH
Confidence 577999999999999999996542 23 33334 579999999999876543322222222221 11111
Q ss_pred CCCceeeecCCCCCCceEEEecCC-----------------------C------------HHHHHHHHHHHhc-CCCEEE
Q psy4398 88 LDGSVVFRTCPREKNKIILQIGTA-----------------------D------------PERALEAAKKVEH-DVAAID 131 (306)
Q Consensus 88 ~~~~~~~~~~~~~~~p~ivql~g~-----------------------~------------~~~~~~aa~~~~~-g~d~ve 131 (306)
++.+.+.+|+.+.++++||+|. . +++|+++|+++.+ |||+||
T Consensus 85 --~~~~~~~vh~~g~~i~~QL~h~Gr~~~~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~~i~~~~~aA~~a~~aGfDgVe 162 (338)
T 1z41_A 85 --FAKLTEQVKEQGSKIGIQLAHAGRKAELEGDIFAPSAIAFDEQSATPVEMSAEKVKETVQEFKQAAARAKEAGFDVIE 162 (338)
T ss_dssp --HHHHHHHHHHTTCEEEEEEECCGGGCCCSSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEE
T ss_pred --HHHHHHHHHhcCCEEEEEecCCCcccCCCCCCcCCCCCCCCCCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEE
Confidence 4556667777889999999874 2 2689999998874 999999
Q ss_pred EccCC---------CccccccCCccccccCChHHHHHHHHHHHhcccccEEEEecc------CCChHHHHHHHHHHHHcC
Q psy4398 132 INMGC---------PKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRV------FHNEADTIALCKRLEACG 196 (306)
Q Consensus 132 ln~gc---------P~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~------g~~~~~~~~~a~~l~~~G 196 (306)
||++| |+.|.++|+||+++++|++++.|++++|+++++.||.||++. |++.++..++++.++++|
T Consensus 163 ih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v~~pv~vris~~~~~~~g~~~~~~~~~a~~l~~~G 242 (338)
T 1z41_A 163 IHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVWDGPLFVRVSASDYTDKGLDIADHIGFAKWMKEQG 242 (338)
T ss_dssp EEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEECCCCSTTSCCHHHHHHHHHHHHHTT
T ss_pred eccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHcCCcEEEEecCcccCCCCCCHHHHHHHHHHHHHcC
Confidence 99986 999999999999999999999999999999999999999997 567888999999999999
Q ss_pred CcEEEEcccCCCCC--CCCC-CcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhh----hhhccccCCCCCchHHHHH
Q psy4398 197 IIAIGVHGRTKAER--PRHR-NRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLN----CAFLRNHYPVEKLPKTILY 269 (306)
Q Consensus 197 ~d~i~v~~~~~~~~--~~~p-~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~----v~vGrall~~p~~~~~~l~ 269 (306)
+|+|++++++.... ..++ .++++++++++.+++|||++|||+|+++++++++.+ +++||+++.||++++...+
T Consensus 243 vd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi~s~~~a~~~l~~G~aD~V~iGR~~i~nPdl~~ki~~ 322 (338)
T 1z41_A 243 VDLIDCSSGALVHADINVFPGYQVSFAEKIREQADMATGAVGMITDGSMAEEILQNGRADLIFIGRELLRDPFFARTAAK 322 (338)
T ss_dssp CCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHCCEEEECSSCCSHHHHHHHHHTTSCSEEEECHHHHHCTTHHHHHHH
T ss_pred CCEEEEecCccccCCCCCCccchHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHcCCceEEeecHHHHhCchHHHHHHc
Confidence 99999998764311 2233 478999999999999999999999999999999875 5999999999988876444
Q ss_pred HH
Q psy4398 270 AH 271 (306)
Q Consensus 270 ~~ 271 (306)
.+
T Consensus 323 ~~ 324 (338)
T 1z41_A 323 QL 324 (338)
T ss_dssp HT
T ss_pred CC
Confidence 43
No 4
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=100.00 E-value=1.2e-38 Score=296.32 Aligned_cols=245 Identities=12% Similarity=0.093 Sum_probs=197.5
Q ss_pred ccccccccccCCceEEccCCCC---------CCHHHHHHH--HHcCCCEEEecceechhhhhhhhhhhcccccccccCCC
Q psy4398 20 ANANQANINYSNKIILAPMVRM---------NTLPFRLLA--LDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPL 88 (306)
Q Consensus 20 ~~~~~~~l~l~n~i~lAPm~~~---------t~~~~r~~~--~~~G~g~~~te~~~~~~~~~~~~~~~~~l~~~~~~~~~ 88 (306)
.|+++++++|+|||++|||+.. |+.....+. +++|+|+++||.+.+.+.........+++ +...+..
T Consensus 7 ~p~~ig~~~l~NRiv~apm~~~~~~~~~g~~~~~~~~~y~~rA~gG~Glii~e~~~v~~~g~~~~~~~~i~-~d~~i~~- 84 (340)
T 3gr7_A 7 SPYTIRGLTLKNRIVMSPMCMYSCDTKDGAVRTWHKIHYPARAVGQVGLIIVEATGVTPQGRISERDLGIW-SDDHIAG- 84 (340)
T ss_dssp SCEEETTEEESSSEEECCCCCCCCTTSSSCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSEECS-STTHHHH-
T ss_pred CCEeECCEEEcCceEECCcCCCcccCCCCCCCHHHHHHHHHHhcCCceEEEEcceEecccccCCCCCcccC-CHHHHHH-
Confidence 6789999999999999999843 223333332 25789999999998776443333222332 2233322
Q ss_pred CCceeeecCCCCCCceEEEecCCC-----------------------------------HHHHHHHHHHHhc-CCCEEEE
Q psy4398 89 DGSVVFRTCPREKNKIILQIGTAD-----------------------------------PERALEAAKKVEH-DVAAIDI 132 (306)
Q Consensus 89 ~~~~~~~~~~~~~~p~ivql~g~~-----------------------------------~~~~~~aa~~~~~-g~d~vel 132 (306)
++.+.+.+|+.|.++++||++.+ .++|+++|+++++ |||+|||
T Consensus 85 -~~~~~~~vh~~G~~i~~QL~H~Gr~~~~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEi 163 (340)
T 3gr7_A 85 -LRELVGLVKEHGAAIGIQLAHAGRKSQVPGEIIAPSAVPFDDSSPTPKEMTKADIEETVQAFQNGARRAKEAGFDVIEI 163 (340)
T ss_dssp -HHHHHHHHHHTTCEEEEEEECCGGGCCSSSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred -HHHHHHHHHhCCCeEEEEeccCCCccCCCCCccCCCCccccCCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 66788888889999999997521 3689999999975 9999999
Q ss_pred ccC---------CCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEecc------CCChHHHHHHHHHHHHcCC
Q psy4398 133 NMG---------CPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRV------FHNEADTIALCKRLEACGI 197 (306)
Q Consensus 133 n~g---------cP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~------g~~~~~~~~~a~~l~~~G~ 197 (306)
|++ ||+.|.++|+||+++++|++++.|++++||++++.||.||++. |++.++..++++.|+++|+
T Consensus 164 h~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v~~pv~vRls~~~~~~~g~~~~~~~~la~~L~~~Gv 243 (340)
T 3gr7_A 164 HAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVWDGPLFVRISASDYHPDGLTAKDYVPYAKRMKEQGV 243 (340)
T ss_dssp EECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEESCCCSTTSCCGGGHHHHHHHHHHTTC
T ss_pred ccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhcCCceEEEeccccccCCCCCHHHHHHHHHHHHHcCC
Confidence 999 5999999999999999999999999999999999999999996 3567889999999999999
Q ss_pred cEEEEccc-CCCCC-C-CCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhh----hhhccccCCCCCchHHH
Q psy4398 198 IAIGVHGR-TKAER-P-RHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLN----CAFLRNHYPVEKLPKTI 267 (306)
Q Consensus 198 d~i~v~~~-~~~~~-~-~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~----v~vGrall~~p~~~~~~ 267 (306)
|+|+++.. ..... . ....++++++++++.+++|||++|||+|+++++++++.+ |++||++++||++++..
T Consensus 244 d~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~~iPVi~~GgI~s~e~a~~~L~~G~aD~V~iGR~~lanPdl~~ki 320 (340)
T 3gr7_A 244 DLVDVSSGAIVPARMNVYPGYQVPFAELIRREADIPTGAVGLITSGWQAEEILQNGRADLVFLGRELLRNPYWPYAA 320 (340)
T ss_dssp CEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHTTCCEEEESSCCCHHHHHHHHHTTSCSEEEECHHHHHCTTHHHHH
T ss_pred CEEEEecCCccCCCCCCCccccHHHHHHHHHHcCCcEEeeCCCCCHHHHHHHHHCCCeeEEEecHHHHhCchHHHHH
Confidence 99999853 22211 1 123478999999999999999999999999999999875 59999999999888653
No 5
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=100.00 E-value=2.4e-38 Score=301.30 Aligned_cols=263 Identities=11% Similarity=0.080 Sum_probs=207.8
Q ss_pred ccccc-cccccCCceEEccCCC--------CCCHHHHHHHHHc-CCCEEEecceechhhhhhhhhhhcccccccccCCCC
Q psy4398 20 ANANQ-ANINYSNKIILAPMVR--------MNTLPFRLLALDY-GADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLD 89 (306)
Q Consensus 20 ~~~~~-~~l~l~n~i~lAPm~~--------~t~~~~r~~~~~~-G~g~~~te~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 89 (306)
.|+++ ++++|+|||++|||+. +|+.....+.+++ |+|+++||.+.+.+.........+++ +...+..
T Consensus 29 ~P~~i~g~~~lkNRiv~aPm~~~~a~~dg~~t~~~~~yy~~rA~G~GLiIte~~~V~~~g~~~~~~~gi~-~d~~i~~-- 105 (419)
T 3l5a_A 29 QSIHLPNGIKISNRFVLSPMTVNASTKEGYITKADLAYAARRSNSAGMQVTGAAYIEPYGKLFEYGFNID-HDACIPG-- 105 (419)
T ss_dssp SCEECTTSCEESSSEEECCCCCCCSCTTCCCCHHHHHHHHHTTTSCSEEEEEEEESSGGGCCSTTCEECS-SGGGHHH--
T ss_pred CCEEeCCCCEECCCeEeCCCCCCccCCCCCCCHHHHHHHHHHhcCCcEEEecceEeCcccccCCCccccc-cHHHHHH--
Confidence 78899 9999999999999984 3344445554443 79999999998876543333222332 3333332
Q ss_pred CceeeecCCCCCCceEEEecCCC----------------------------------------HHHHHHHHHHHhc-CCC
Q psy4398 90 GSVVFRTCPREKNKIILQIGTAD----------------------------------------PERALEAAKKVEH-DVA 128 (306)
Q Consensus 90 ~~~~~~~~~~~~~p~ivql~g~~----------------------------------------~~~~~~aa~~~~~-g~d 128 (306)
++.+.+++|+.|.++++||++.+ .++|++||+++.+ |||
T Consensus 106 ~k~l~~avh~~G~~i~~QL~H~Gr~~~~~~~~~~~~vapS~i~~~~~~~~~pr~mt~~eI~~ii~~F~~AA~rA~~AGfD 185 (419)
T 3l5a_A 106 LTNMASTMKQHGSLAIIQLAHAGRFSNQAILNFGKVYGPSPMTLHSPIEHVVIAMSHEKINSIIQQYRDATLRAIKAGFD 185 (419)
T ss_dssp HHHHHHHHHTTSCEEEEEEECCGGGCHHHHHHHSEEEESSCEEECSSSSEEEEECCHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHhcCCEEEEEeccCCCcccccccCCCceeCCCCCccccCCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 67788888889999999997531 2679999999975 999
Q ss_pred EEEEccCC---------CccccccCCccccc-cCChHHHHHHHHHHHhcc------cccEEEEecc--------CCChHH
Q psy4398 129 AIDINMGC---------PKQFSLTGGMGAAL-LSTPDIACNILTTLISNL------SIPVSCKIRV--------FHNEAD 184 (306)
Q Consensus 129 ~veln~gc---------P~~~~~~~~~G~~l-~~~~~~~~eiv~~v~~~~------~~pv~vKir~--------g~~~~~ 184 (306)
+||||++| |..|.|+|+||+++ ++|++++.||+++|++++ ++||.+|++. |++.++
T Consensus 186 gVEIH~ahGYLl~QFlSp~~N~RtD~yGGs~lenR~Rf~~evv~aVr~~v~~~~~~~f~v~vRis~~~~~~~~~G~~~ed 265 (419)
T 3l5a_A 186 GVEISIAQRLLIQTFFSTFSNRRTDHYGADSLKNRARLCLEVMRAVQEVIDKEAPDNFILGFRATPEETRGSDLGYTIDE 265 (419)
T ss_dssp EEEEECCTTSHHHHHHCTTTCCCCSTTSTTCHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEECSCEEETTEEEECHHH
T ss_pred EEEECCccchHHHHccCCcccccccCCCCchhhhhhHHHHHHHHHHHHHHhhhcCCCeeEEEecccccccCCCCCCCHHH
Confidence 99999997 99999999999999 999999999999999987 5799999997 567889
Q ss_pred HHHHHHHHHH-cCCcEEEEcccCC-----CCCCCCC-CcHHHHHHHHhhC--CCcEEEecCCCCHHHHHHHHHh--hhhh
Q psy4398 185 TIALCKRLEA-CGIIAIGVHGRTK-----AERPRHR-NRIEMIRTLTQHL--KIPVIANGGSKEIVDYGGVFSL--NCAF 253 (306)
Q Consensus 185 ~~~~a~~l~~-~G~d~i~v~~~~~-----~~~~~~p-~~~~~v~~i~~~~--~ipvia~GGI~s~~~~~~~l~~--~v~v 253 (306)
+.++++.|++ +|+|+|++++++. ...+.++ .++++++.+++.+ ++|||++|||+|+++++++++. +|++
T Consensus 266 ~~~la~~L~~~~Gvd~I~vs~g~~~~~~~~~~~~g~~~~~~~a~~Ik~~v~~~iPVI~~GgI~t~e~Ae~~L~~aDlVai 345 (419)
T 3l5a_A 266 FNQLIDWVMDVSNIQYLAIASWGRHIYQNTSRTPGDHFGRPVNQIVYEHLAGRIPLIASGGINSPESALDALQHADMVGM 345 (419)
T ss_dssp HHHHHHHHHHHSCCCCEEECCTTCCGGGCBCCCSSTTTTSBHHHHHHHHHTTSSCEEECSSCCSHHHHHHHGGGCSEEEE
T ss_pred HHHHHHHHHhhcCCcEEEEeeCCccccccccCCCCccccHHHHHHHHHHcCCCCeEEEECCCCCHHHHHHHHHhCCcHHH
Confidence 9999999999 9999999998753 1122222 3567889999998 6999999999999999999986 5599
Q ss_pred ccccCCCCCchHHHHHHHHHhcCCCCCcceehhhc
Q psy4398 254 LRNHYPVEKLPKTILYAHCKYKRFEVPKYETVQYE 288 (306)
Q Consensus 254 Grall~~p~~~~~~l~~~~~~~g~~~~~~~~~~~~ 288 (306)
||++++||+|+++..+.+.++- .+|+.|++++
T Consensus 346 GR~~IanPdlv~ki~~G~~~~I---~~ci~~~~~~ 377 (419)
T 3l5a_A 346 SSPFVTEPDFVHKLAEQRPHDI---NLEFSMADLE 377 (419)
T ss_dssp STHHHHCTTHHHHHHTTCGGGC---CCCCCGGGTT
T ss_pred HHHHHHCcHHHHHHHcCCcccc---eecCCHHHHH
Confidence 9999999999876433332221 5688887754
No 6
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=100.00 E-value=1.1e-38 Score=296.75 Aligned_cols=257 Identities=13% Similarity=0.038 Sum_probs=208.0
Q ss_pred eccc-ccccccccccCCceEEccCCCCCCHHHHHHHHHcCCCEEEecceechhhhh--h---hhhhhcccccccccCCCC
Q psy4398 16 VLDM-ANANQANINYSNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVK--T---ERKVNDLLNTIDFVDPLD 89 (306)
Q Consensus 16 ~~~~-~~~~~~~l~l~n~i~lAPm~~~t~~~~r~~~~~~G~g~~~te~~~~~~~~~--~---~~~~~~~l~~~~~~~~~~ 89 (306)
+.++ |++++.|++|+|||++|+++...+..+.......|+|++++++++.++... . .+...+++|++++.|+|.
T Consensus 32 ~~~~~L~~~~~Gl~~~NPv~lAAG~~~~~~e~~~~l~~~G~G~v~~ktvt~~pq~GNp~PR~~~~~~~~iN~~G~~n~G~ 111 (354)
T 4ef8_A 32 RGSMSLQVNLLNNTFANPFMNAAGVMCTTTEELVAMTESASGSLVSKSCTPALREGNPTPRYQALPLGSINSMGLPNNGF 111 (354)
T ss_dssp --CCCCCEEETTEEESSSEEECTTSSCSSHHHHHHHHHSSCSCEEEEEECSSCBCCSCSCCEEEETTEEEECCCCCBCCH
T ss_pred CCCCCcceEECCEECCCCCEeccCCCCCCHHHHHHHHHcCCCeEEeCcccCcccCCCCCCcEEecchhhhccCCCCCcCH
Confidence 3445 999999999999999999998677776665558899999999999775421 1 123467899999999976
Q ss_pred Cceeeec--C-CCCCCceEEEecCCCHHHHHHHHHHHh---c-CCCEEEEccCCCccccccCCccccccCChHHHHHHHH
Q psy4398 90 GSVVFRT--C-PREKNKIILQIGTADPERALEAAKKVE---H-DVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILT 162 (306)
Q Consensus 90 ~~~~~~~--~-~~~~~p~ivql~g~~~~~~~~aa~~~~---~-g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~ 162 (306)
...+.+. . ...+.|+++||+|.++++|.+++++++ + |+|+||||++||+.. + |..++.+++.+.++++
T Consensus 112 ~~~~~~l~~~~~~~~~pvivsI~G~~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~~----g-g~~l~~~~e~~~~il~ 186 (354)
T 4ef8_A 112 DFYLAYAAEQHDYGKKPLFLSMSGLSMRENVEMCKRLAAVATEKGVILELNLSCPNVP----G-KPQVAYDFDAMRQCLT 186 (354)
T ss_dssp HHHHHHHHHTCCTTTCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECSSCCST----T-SCCGGGSHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCcEEEEeccCCHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCCC----C-chhhccCHHHHHHHHH
Confidence 4432221 1 223679999999999999999999887 3 899999999999962 2 5678889999999999
Q ss_pred HHHhcccccEEEEeccCCChHHHHHHHHHHHHcC-CcEEEEcccC------------C-------CCCCCC----CCcHH
Q psy4398 163 TLISNLSIPVSCKIRVFHNEADTIALCKRLEACG-IIAIGVHGRT------------K-------AERPRH----RNRIE 218 (306)
Q Consensus 163 ~v~~~~~~pv~vKir~g~~~~~~~~~a~~l~~~G-~d~i~v~~~~------------~-------~~~~~~----p~~~~ 218 (306)
++++.+++||+||++.+++.++..++++.++++| +|+|++++.. . .+.+++ |.+|+
T Consensus 187 av~~~~~~PV~vKi~p~~d~~~~~~~a~~~~~~Gg~d~I~~~NT~~~g~~idi~~~~~~~~~~~~~gGlSG~~i~p~a~~ 266 (354)
T 4ef8_A 187 AVSEVYPHSFGVKMPPYFDFAHFDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALA 266 (354)
T ss_dssp HHHHHCCSCEEEEECCCCSHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHH
T ss_pred HHHHhhCCCeEEEecCCCCHHHHHHHHHHHHhCCCccEEEEecccCcceeeeccCCccccccccccCCCCCCCCchHHHH
Confidence 9999999999999998888788889999999998 9999875422 0 112333 35799
Q ss_pred HHHHHHhhC-CCcEEEecCCCCHHHHHHHHHhh---hhhccccCCC-CCch-HH--HHHHHHHhcCC
Q psy4398 219 MIRTLTQHL-KIPVIANGGSKEIVDYGGVFSLN---CAFLRNHYPV-EKLP-KT--ILYAHCKYKRF 277 (306)
Q Consensus 219 ~v~~i~~~~-~ipvia~GGI~s~~~~~~~l~~~---v~vGrall~~-p~~~-~~--~l~~~~~~~g~ 277 (306)
+++++++.+ ++|||++|||.|.+|+.+.+..| ||+||+++.+ |.+. ++ +|++||+++|+
T Consensus 267 ~i~~v~~~~~~ipII~~GGI~s~~da~~~l~aGAd~V~vgra~l~~GP~~~~~i~~~l~~~m~~~G~ 333 (354)
T 4ef8_A 267 NINAFYRRCPGKLIFGCGGVYTGEDAFLHVLAGASMVQVGTALQEEGPSIFERLTSELLGVMAKKRY 333 (354)
T ss_dssp HHHHHHHHCTTSEEEEESCCCSHHHHHHHHHHTEEEEEECHHHHHHCTTHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHhCCCCCEEEECCcCCHHHHHHHHHcCCCEEEEhHHHHHhCHHHHHHHHHHHHHHHHHcCC
Confidence 999999997 79999999999999999999875 5999999886 9554 43 99999999994
No 7
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=100.00 E-value=5.1e-38 Score=294.28 Aligned_cols=260 Identities=15% Similarity=0.103 Sum_probs=212.2
Q ss_pred ccccccccccCCceEEccCCCCCCHHHHHHHHHcCCCEEEecceechhhhhh-------hhhhhcccccccccCCCCCce
Q psy4398 20 ANANQANINYSNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKT-------ERKVNDLLNTIDFVDPLDGSV 92 (306)
Q Consensus 20 ~~~~~~~l~l~n~i~lAPm~~~t~~~~r~~~~~~G~g~~~te~~~~~~~~~~-------~~~~~~~l~~~~~~~~~~~~~ 92 (306)
+++++.|++|+|||++|++.+.+...+..+. ..|+|+++++++++.+.... .+...+++|++++.|+|....
T Consensus 50 L~~~~~Gl~~~NPvglAaG~~~~~~~~~~~~-~~g~G~v~~ktvt~~pq~GNp~PR~~~~~~~~~~iN~~G~~N~G~~~~ 128 (367)
T 3zwt_A 50 LEVRVLGHKFRNPVGIAAGFDKHGEAVDGLY-KMGFGFVEIGSVTPKPQEGNPRPRVFRLPEDQAVINRYGFNSHGLSVV 128 (367)
T ss_dssp GCEEETTEEESSSEEECTTSSTTSSSHHHHH-HTTCSEEEEEEECSSCBCCSCSCCEEEEGGGTEEEECCCCCBCCHHHH
T ss_pred CcEEECCEEcCCCCEeCCCcCCCHHHHHHHH-hcCcCeEEeCCccCCCCCCCCCCeEEEecCccceeeccCCCCccHHHH
Confidence 8999999999999999999987777777776 56999999999997764311 112247899999999986443
Q ss_pred eeecCC---------CCCCceEEEecCC-----CHHHHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHH
Q psy4398 93 VFRTCP---------REKNKIILQIGTA-----DPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIAC 158 (306)
Q Consensus 93 ~~~~~~---------~~~~p~ivql~g~-----~~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~ 158 (306)
+.+..+ ..+.|+++||+++ ++++|+++++.+.+++|+||||+|||+.. |..++++++.+.
T Consensus 129 ~~~l~~~~~~~~~~~~~~~pv~vniggn~~t~~~~~dy~~~~~~~~~~ad~ielNisCPn~~------G~~~l~~~~~l~ 202 (367)
T 3zwt_A 129 EHRLRARQQKQAKLTEDGLPLGVNLGKNKTSVDAAEDYAEGVRVLGPLADYLVVNVSSPNTA------GLRSLQGKAELR 202 (367)
T ss_dssp HHHHHTTHHHHHHHHHTTCCEEEEECCCTTCSCHHHHHHHHHHHHGGGCSEEEEECCCTTST------TGGGGGSHHHHH
T ss_pred HHHHHHHhhhccccccCCceEEEEEecCCCCCcCHHHHHHHHHHHhhhCCEEEEECCCCCCC------CccccCCHHHHH
Confidence 222211 1257999999886 68999999999988899999999999962 445778999999
Q ss_pred HHHHHHHhc-------ccccEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcccCCC-------------CCCCCC----
Q psy4398 159 NILTTLISN-------LSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKA-------------ERPRHR---- 214 (306)
Q Consensus 159 eiv~~v~~~-------~~~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~-------------~~~~~p---- 214 (306)
++++++++. .++||+||++.+++.++..++|+.++++|+|+|++|+++.. +.++++
T Consensus 203 ~ll~av~~~~~~~~~~~~~Pv~vKi~p~~~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p 282 (367)
T 3zwt_A 203 RLLTKVLQERDGLRRVHRPAVLVKIAPDLTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRD 282 (367)
T ss_dssp HHHHHHHHHHHTSCGGGCCEEEEEECSCCCHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHH
T ss_pred HHHHHHHHHHhhccccCCceEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccch
Confidence 999999764 67999999998877788999999999999999999987632 223333
Q ss_pred CcHHHHHHHHhhC--CCcEEEecCCCCHHHHHHHHHhh---hhhcccc-CCCCCc-hHH--HHHHHHHhcCCCCCcceeh
Q psy4398 215 NRIEMIRTLTQHL--KIPVIANGGSKEIVDYGGVFSLN---CAFLRNH-YPVEKL-PKT--ILYAHCKYKRFEVPKYETV 285 (306)
Q Consensus 215 ~~~~~v~~i~~~~--~ipvia~GGI~s~~~~~~~l~~~---v~vGral-l~~p~~-~~~--~l~~~~~~~g~~~~~~~~~ 285 (306)
..+++++++++.+ ++|||++|||.|.+|+.++++.| |++||++ +.||.+ .++ +|++||+++|
T Consensus 283 ~a~~~v~~i~~~v~~~ipvI~~GGI~s~~da~~~l~~GAd~V~vgra~l~~gP~~~~~i~~~l~~~m~~~G--------- 353 (367)
T 3zwt_A 283 LSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQLYTALTFWGPPVVGKVKRELEALLKEQG--------- 353 (367)
T ss_dssp HHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHHHCTHHHHHHHHHHHHHHHHTT---------
T ss_pred hHHHHHHHHHHHcCCCceEEEECCCCCHHHHHHHHHcCCCEEEECHHHHhcCcHHHHHHHHHHHHHHHHcC---------
Confidence 2468999999999 89999999999999999999875 5999998 568944 444 9999999999
Q ss_pred hhccceeeEEEEcCc
Q psy4398 286 QYEKLFRSLVTVNGK 300 (306)
Q Consensus 286 ~~~~~~~~~~~~~~~ 300 (306)
|+|+.+++|+
T Consensus 354 -----~~~i~e~~G~ 363 (367)
T 3zwt_A 354 -----FGGVTDAIGA 363 (367)
T ss_dssp -----CSSHHHHTTG
T ss_pred -----CCCHHHhhCc
Confidence 7777777775
No 8
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=100.00 E-value=2e-37 Score=289.39 Aligned_cols=245 Identities=13% Similarity=0.131 Sum_probs=197.3
Q ss_pred ccccccccccCCceEEccCCCC--------CCHHHHHHH--HHcCCCEEEecceechhhhhhhhhhhcccccccccCCCC
Q psy4398 20 ANANQANINYSNKIILAPMVRM--------NTLPFRLLA--LDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLD 89 (306)
Q Consensus 20 ~~~~~~~l~l~n~i~lAPm~~~--------t~~~~r~~~--~~~G~g~~~te~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 89 (306)
.|+++++++|+|||++|||+.. |+.....+. +++|+|+++||.+.+.+.........+++ +..++..
T Consensus 6 ~p~~ig~~~l~NRiv~apm~~~~~~~~g~~~~~~~~~y~~rA~gg~Glii~e~~~v~~~g~~~~~~~~i~-~d~~i~~-- 82 (349)
T 3hgj_A 6 TPLELGGLRLKNRLAMSPMCQYSATLEGEVTDWHLLHYPTRALGGVGLILVEATAVEPLGRISPYDLGIW-SEDHLPG-- 82 (349)
T ss_dssp SCEEETTEEESSSEEECCCCCCCSCTTCCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSCBCS-SGGGHHH--
T ss_pred CCeeECCEEecCceEECCcCcCCcCCCCCCCHHHHHHHHHHhcCCceEEEecceeecccccCCCCcCccC-cHHHHHH--
Confidence 6779999999999999999953 233333332 25789999999998876543333222333 2233322
Q ss_pred CceeeecCCCCCCceEEEecCCC---------------------------------------------HHHHHHHHHHHh
Q psy4398 90 GSVVFRTCPREKNKIILQIGTAD---------------------------------------------PERALEAAKKVE 124 (306)
Q Consensus 90 ~~~~~~~~~~~~~p~ivql~g~~---------------------------------------------~~~~~~aa~~~~ 124 (306)
++.+.+.+|+.|.++++||++.+ .++|+++|+++.
T Consensus 83 ~~~~~~~vh~~G~~i~~Ql~H~Gr~~~~~~~~~~~~~~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~ii~~f~~aA~~a~ 162 (349)
T 3hgj_A 83 LKELARRIREAGAVPGIQLAHAGRKAGTARPWEGGKPLGWRVVGPSPIPFDEGYPVPEPLDEAGMERILQAFVEGARRAL 162 (349)
T ss_dssp HHHHHHHHHHTTCEEEEEEECCGGGCCBCCGGGTCCBCCCCCEESSSCCSSTTCCCCEECCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCeEEEEeccCCccccccccccccccCCCcccCCCcccccCCCCCCccCCHHHHHHHHHHHHHHHHHHH
Confidence 66788888888999999996410 267999999987
Q ss_pred c-CCCEEEEccCC---------CccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEecc------CCChHHHH
Q psy4398 125 H-DVAAIDINMGC---------PKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIRV------FHNEADTI 186 (306)
Q Consensus 125 ~-g~d~veln~gc---------P~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~------g~~~~~~~ 186 (306)
+ |||+||||++| |+.|.++|+||+++++|++++.|++++||+++ ++||.||++. |++.++..
T Consensus 163 ~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~pV~vRls~~~~~~~g~~~~~~~ 242 (349)
T 3hgj_A 163 RAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRELPLFVRVSATDWGEGGWSLEDTL 242 (349)
T ss_dssp HTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSCEEEEEESCCCSTTSCCHHHHH
T ss_pred HcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCCHHHHH
Confidence 5 99999999999 99999999999999999999999999999999 6899999997 57788999
Q ss_pred HHHHHHHHcCCcEEEEcc-cCCCC--CCC-CCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhh----hhhccccC
Q psy4398 187 ALCKRLEACGIIAIGVHG-RTKAE--RPR-HRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLN----CAFLRNHY 258 (306)
Q Consensus 187 ~~a~~l~~~G~d~i~v~~-~~~~~--~~~-~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~----v~vGrall 258 (306)
++++.|+++|+|+|+++. +.... .+. ...++++++++++.+++|||++|||+|+++++++++.+ +++||+++
T Consensus 243 ~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi~t~e~a~~~l~~G~aD~V~iGR~~l 322 (349)
T 3hgj_A 243 AFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRVGLRTGAVGLITTPEQAETLLQAGSADLVLLGRVLL 322 (349)
T ss_dssp HHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHHCCEEEECSSCCCHHHHHHHHHTTSCSEEEESTHHH
T ss_pred HHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHcCceEEEECCCCCHHHHHHHHHCCCceEEEecHHHH
Confidence 999999999999999984 33211 111 22578999999999999999999999999999999875 59999999
Q ss_pred CCCCchHHH
Q psy4398 259 PVEKLPKTI 267 (306)
Q Consensus 259 ~~p~~~~~~ 267 (306)
+||+++++.
T Consensus 323 anPdl~~k~ 331 (349)
T 3hgj_A 323 RDPYFPLRA 331 (349)
T ss_dssp HCTTHHHHH
T ss_pred hCchHHHHH
Confidence 999888653
No 9
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=100.00 E-value=2.5e-38 Score=297.88 Aligned_cols=242 Identities=15% Similarity=0.153 Sum_probs=195.6
Q ss_pred ccccccccccCCceEEccCCCC-------CCHHHHHHHHHcCCCEEEecceechhhhhhhhhhhcccccccccCCCCCce
Q psy4398 20 ANANQANINYSNKIILAPMVRM-------NTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDGSV 92 (306)
Q Consensus 20 ~~~~~~~l~l~n~i~lAPm~~~-------t~~~~r~~~~~~G~g~~~te~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 92 (306)
.|+++++++|+|||++|||+.. |+..++.+++++|+|+++||++.+.+.........++++. ..+.. ++.
T Consensus 13 ~P~~ig~~~l~NRiv~aPm~~~~a~~g~pt~~~~~~y~~rA~~GLiitE~~~v~~~g~~~~~~~gi~~d-~~i~~--~k~ 89 (377)
T 2r14_A 13 TPLQLGSLSLPNRVIMAPLTRSRTPDSVPGRLQQIYYGQRASAGLIISEATNISPTARGYVYTPGIWTD-AQEAG--WKG 89 (377)
T ss_dssp SCEEETTEEESCSEEECCCCCCCCTTSCCCHHHHHHHHHTTTSSCEEEEEEESSGGGCCBTTCCBSSSH-HHHHH--HHH
T ss_pred CCeeECCEEecCCeEECCCcCCcCCCCCCCHHHHHHHHHHhcCCEEEEcceeeccccccCCCCcccCCH-HHHHH--HHH
Confidence 6789999999999999999965 7788899988899999999999886543322222222221 12111 455
Q ss_pred eeecCCCCCCceEEEecCC-------------------------------------------CH------------HHHH
Q psy4398 93 VFRTCPREKNKIILQIGTA-------------------------------------------DP------------ERAL 117 (306)
Q Consensus 93 ~~~~~~~~~~p~ivql~g~-------------------------------------------~~------------~~~~ 117 (306)
+.+.+|+.|.++++||+|. .| ++|+
T Consensus 90 l~~avh~~G~~i~~QL~H~Gr~~~~~~~~~~~~~~apS~i~~~~~~~~~~~~~~~~~~~~~~~p~~mt~~eI~~~i~~f~ 169 (377)
T 2r14_A 90 VVEAVHAKGGRIALQLWHVGRVSHELVQPDGQQPVAPSALKAEGAECFVEFEDGTAGLHPTSTPRALETDEIPGIVEDYR 169 (377)
T ss_dssp HHHHHHHTTCCEEEEEECCTTSCCTTTSGGGCCCEESSSCCCTTCEEEEECTTSCEEEEECCCCEECCGGGHHHHHHHHH
T ss_pred HHHHHhhcCCeEEEEccCCccccccccccCCCcccCCCcccccccccccccccccccccCCCCCccCCHHHHHHHHHHHH
Confidence 6677777889999999861 22 6899
Q ss_pred HHHHHHhc-CCCEEEEccCC---------CccccccCCccccccCChHHHHHHHHHHHhcccc-cEEEEeccC-------
Q psy4398 118 EAAKKVEH-DVAAIDINMGC---------PKQFSLTGGMGAALLSTPDIACNILTTLISNLSI-PVSCKIRVF------- 179 (306)
Q Consensus 118 ~aa~~~~~-g~d~veln~gc---------P~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~-pv~vKir~g------- 179 (306)
++|+++.+ |||+||||++| |..|.++|+||+++++|++++.|++++||++++. ||.||++..
T Consensus 170 ~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~v~vrls~~~~~~~~~ 249 (377)
T 2r14_A 170 QAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPERVGIRLTPFLELFGLT 249 (377)
T ss_dssp HHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCCTTCC
T ss_pred HHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCCCcEEEEeccccccCCCC
Confidence 99999875 99999999997 9999999999999999999999999999999953 999999863
Q ss_pred --CChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhh----hhh
Q psy4398 180 --HNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLN----CAF 253 (306)
Q Consensus 180 --~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~----v~v 253 (306)
++.++..++++.|+++|+|+|++++++..+.+.. ..+++++++++.+++|||++||| ++++++++++.+ |++
T Consensus 250 ~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~-~~~~~~~~ik~~~~iPvi~~Ggi-~~~~a~~~l~~g~aD~V~i 327 (377)
T 2r14_A 250 DDEPEAMAFYLAGELDRRGLAYLHFNEPDWIGGDIT-YPEGFREQMRQRFKGGLIYCGNY-DAGRAQARLDDNTADAVAF 327 (377)
T ss_dssp CSCHHHHHHHHHHHHHHTTCSEEEEECCC------C-CCTTHHHHHHHHCCSEEEEESSC-CHHHHHHHHHTTSCSEEEE
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCc-chHHHHHHHHHHCCCCEEEECCC-CHHHHHHHHHCCCceEEee
Confidence 2356789999999999999999998754332222 25788999999999999999999 699999999874 599
Q ss_pred ccccCCCCCchHH
Q psy4398 254 LRNHYPVEKLPKT 266 (306)
Q Consensus 254 Grall~~p~~~~~ 266 (306)
||++++||++++.
T Consensus 328 gR~~l~~P~l~~k 340 (377)
T 2r14_A 328 GRPFIANPDLPER 340 (377)
T ss_dssp SHHHHHCTTHHHH
T ss_pred cHHHHhCchHHHH
Confidence 9999999988865
No 10
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=100.00 E-value=9e-38 Score=290.32 Aligned_cols=260 Identities=15% Similarity=0.115 Sum_probs=203.2
Q ss_pred ccccccccccCCceEEccCCCC--------CCHHHHHHH--HHcCCCEEEecceechhhhhhhhhhhcccccccccCCCC
Q psy4398 20 ANANQANINYSNKIILAPMVRM--------NTLPFRLLA--LDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLD 89 (306)
Q Consensus 20 ~~~~~~~l~l~n~i~lAPm~~~--------t~~~~r~~~--~~~G~g~~~te~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 89 (306)
.|+++++++|+|||++|||+.. |+.....+. +++|+|+++||.+.+.+.........+++ +...+..
T Consensus 6 ~P~~ig~~~l~NRiv~apm~~~~~~~~g~~t~~~~~yy~~rA~gG~Gliite~~~V~~~g~~~~~~~gi~-~d~~i~~-- 82 (343)
T 3kru_A 6 MPLKIKDITIKNRIMMSPMCMYSASTDGMPNDWHIVHYATRAIGGVGLIMQEATAVESRGRITDHDLGIW-NDEQVKE-- 82 (343)
T ss_dssp SCEEETTEEESSSEEECCCCCCCSCTTCCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSCBCS-SHHHHHH--
T ss_pred ccceeeeeeeeeeecccchhheecccCCCCCceeeeeeehhhccceeeeeehhhhhhhcCcccccccccc-CHHHHHH--
Confidence 6779999999999999999942 333333332 25789999999998776543333222332 2223322
Q ss_pred CceeeecCCCCCCceEEEecCCC------------------------------------HHHHHHHHHHHhc-CCCEEEE
Q psy4398 90 GSVVFRTCPREKNKIILQIGTAD------------------------------------PERALEAAKKVEH-DVAAIDI 132 (306)
Q Consensus 90 ~~~~~~~~~~~~~p~ivql~g~~------------------------------------~~~~~~aa~~~~~-g~d~vel 132 (306)
++.+.+.+|+.|.++++||++.+ .++|+++|+++++ |||+|||
T Consensus 83 ~~~~~~~vh~~G~~i~~QL~H~Gr~~~~~g~~~~apS~i~~~~~~~~p~~mt~~eI~~ii~~f~~AA~~a~~aGfDgVEi 162 (343)
T 3kru_A 83 LKKIVDICKANGAVMGIQLAHAGRKCNISYEDVVGPSPIKAGDRYKLPRELSVEEIKSIVKAFGEAAKRANLAGYDVVEI 162 (343)
T ss_dssp HHHHHHHHHHTTCEEEEEEECCGGGCCCTTSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHhcCCceEeeehhhccCccCcchhhccCCCcCCCCccccCchhcCHHHHHHHHHHHHHHHhhccccCCceEEE
Confidence 66788888888999999997521 3689999999975 9999999
Q ss_pred c---------cCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEecc------CCChHHHHHHHHHHHHc
Q psy4398 133 N---------MGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIRV------FHNEADTIALCKRLEAC 195 (306)
Q Consensus 133 n---------~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~------g~~~~~~~~~a~~l~~~ 195 (306)
| |.||..|.++|+||+++++|++++.|++++||+++ ++||.||++. |++.++..++++.|+++
T Consensus 163 h~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~pv~vRls~~~~~~~g~~~~~~~~~a~~l~~~ 242 (343)
T 3kru_A 163 HAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENKPIFVRVSADDYMEGGINIDMMVEYINMIKDK 242 (343)
T ss_dssp EECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTSCEEEEEECCCSSTTSCCHHHHHHHHHHHTTT
T ss_pred ecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccCCeEEEeechhhhccCccHHHHHHHHHHhhcc
Confidence 9 67999999999999999999999999999999999 6899999997 35678899999999999
Q ss_pred CCcEEEE-cccCCCCC--CCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhh----hhhccccCCCCCchHHHH
Q psy4398 196 GIIAIGV-HGRTKAER--PRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLN----CAFLRNHYPVEKLPKTIL 268 (306)
Q Consensus 196 G~d~i~v-~~~~~~~~--~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~----v~vGrall~~p~~~~~~l 268 (306)
+|+|++ +++..... .....++++++++++.+++|||++|||+|+++++++++.+ |++||++++||+|+++..
T Consensus 243 -vd~i~vs~g~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi~t~e~Ae~~l~~G~aD~V~iGR~~lanPdl~~k~~ 321 (343)
T 3kru_A 243 -VDLIDVSSGGLLNVDINLYPGYQVKYAETIKKRCNIKTSAVGLITTQELAEEILSNERADLVALGRELLRNPYWVLHTY 321 (343)
T ss_dssp -CSEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHTCEEEEESSCCCHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHTC
T ss_pred -ccEEeccCCceEeeeecccCceeehHHHHHHHhcCcccceeeeeeHHHHHHHHHhchhhHHHHHHHHHhcCCeEEEEEe
Confidence 999999 45543321 1122478999999999999999999999999999999874 599999999998887632
Q ss_pred HHHHHhcCCCCCcceehhhcccee
Q psy4398 269 YAHCKYKRFEVPKYETVQYEKLFR 292 (306)
Q Consensus 269 ~~~~~~~g~~~~~~~~~~~~~~~~ 292 (306)
| .......||.+.|.
T Consensus 322 -------~--~~~~~~~~~~~~~~ 336 (343)
T 3kru_A 322 -------T--SKEDWPKQYERAFK 336 (343)
T ss_dssp -------S--SGGGSCGGGGGGCC
T ss_pred -------c--ccccchHHHHHHHH
Confidence 3 22334556666664
No 11
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=100.00 E-value=1.8e-37 Score=291.03 Aligned_cols=241 Identities=15% Similarity=0.139 Sum_probs=194.3
Q ss_pred ccccccccccCCceEEccCCCCC---------CHHHHHHHHHcCCCEEEecceechhhhhhhhhhhcccccccccCCCCC
Q psy4398 20 ANANQANINYSNKIILAPMVRMN---------TLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDG 90 (306)
Q Consensus 20 ~~~~~~~l~l~n~i~lAPm~~~t---------~~~~r~~~~~~G~g~~~te~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 90 (306)
.|+++++++|+|||++|||+..+ +..++.+++++|+|+++||++.+.+.........++++. ..+.. +
T Consensus 7 ~P~~ig~~~l~NRiv~aPm~~~~a~~~~g~~t~~~~~~y~~rA~~GLiite~~~v~~~g~~~~~~~gi~~d-~~i~~--~ 83 (365)
T 2gou_A 7 QPITLGALTLKNRIVMPPMTRSRASQPGDVANHMMAIYYAQRASAGLIVSEGTQISPTAKGYAWTPGIYTP-EQIAG--W 83 (365)
T ss_dssp SCEEETTEEESSSEEECCCCCCCCBTTTTBCCHHHHHHHHTTTTSSEEEEEEEESSGGGCCSTTCCBSSSH-HHHHH--H
T ss_pred CCeeECCEEEcCceEECCCCCCcccCCCCCCCHHHHHHHHHHhcCCEEEECceeecccccCCCCCCccCCH-HHHHH--H
Confidence 56799999999999999999764 456888888889999999999876543322222222221 12111 4
Q ss_pred ceeeecCCCCCCceEEEecC------------------------------------------CCH------------HHH
Q psy4398 91 SVVFRTCPREKNKIILQIGT------------------------------------------ADP------------ERA 116 (306)
Q Consensus 91 ~~~~~~~~~~~~p~ivql~g------------------------------------------~~~------------~~~ 116 (306)
+.+.+.+|+.+.++++||+| ..| ++|
T Consensus 84 ~~l~~~vh~~g~~i~~QL~H~Gr~~~~~~~~g~~~~apS~i~~~~~~~~~~~~~g~~~~~~~~~p~~mt~~eI~~~i~~f 163 (365)
T 2gou_A 84 RIVTEAVHAKGCAIFAQLWHVGRVTHPDNIDGQQPISSSTLKAENVKVFVDNGSDEPGFVDVAVPRAMTKADIAQVIADY 163 (365)
T ss_dssp HHHHHHHHHHSCEEEEEEECCTTSSCGGGTTTCCCEESSSCCCTTCEEEECCSSSSCEEEECCCCEECCHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCeEEEEeecCCCcccccccCCCCccCCCCccccccccccccccccccccCCCCCCcCCHHHHHHHHHHH
Confidence 55666777788899999975 112 689
Q ss_pred HHHHHHHhc-CCCEEEEccCC---------CccccccCCccccccCChHHHHHHHHHHHhcccc-cEEEEecc-CC----
Q psy4398 117 LEAAKKVEH-DVAAIDINMGC---------PKQFSLTGGMGAALLSTPDIACNILTTLISNLSI-PVSCKIRV-FH---- 180 (306)
Q Consensus 117 ~~aa~~~~~-g~d~veln~gc---------P~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~-pv~vKir~-g~---- 180 (306)
+++|+++.+ |||+||||++| |+.|.++|+||+++++|++++.|++++||++++. ||.||++. ++
T Consensus 164 ~~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~pv~vris~~~~~~~~ 243 (365)
T 2gou_A 164 RQAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIGAERVGVRLAPLTTLNGT 243 (365)
T ss_dssp HHHHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECSSCCTTSC
T ss_pred HHHHHHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcCCCcEEEEEccccccCCC
Confidence 999998874 99999999987 9999999999999999999999999999999853 99999997 22
Q ss_pred ----ChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhh----hh
Q psy4398 181 ----NEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLN----CA 252 (306)
Q Consensus 181 ----~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~----v~ 252 (306)
+.++..++++.++++|+|+|++++++..+.. ...+++++++++.+++|||++||| |+++++++++.+ |+
T Consensus 244 ~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~--~~~~~~~~~i~~~~~iPvi~~Ggi-~~~~a~~~l~~g~aD~V~ 320 (365)
T 2gou_A 244 VDADPILTYTAAAALLNKHRIVYLHIAEVDWDDAP--DTPVSFKRALREAYQGVLIYAGRY-NAEKAEQAINDGLADMIG 320 (365)
T ss_dssp CCSSHHHHHHHHHHHHHHTTCSEEEEECCBTTBCC--CCCHHHHHHHHHHCCSEEEEESSC-CHHHHHHHHHTTSCSEEE
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcCCCC--CccHHHHHHHHHHCCCcEEEeCCC-CHHHHHHHHHCCCcceeh
Confidence 3456899999999999999999987532211 135788999999999999999999 899999999874 59
Q ss_pred hccccCCCCCchHH
Q psy4398 253 FLRNHYPVEKLPKT 266 (306)
Q Consensus 253 vGrall~~p~~~~~ 266 (306)
+||+++.||++++.
T Consensus 321 igR~~i~~P~l~~~ 334 (365)
T 2gou_A 321 FGRPFIANPDLPER 334 (365)
T ss_dssp CCHHHHHCTTHHHH
T ss_pred hcHHHHhCchHHHH
Confidence 99999999988765
No 12
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=100.00 E-value=2.8e-37 Score=289.66 Aligned_cols=241 Identities=14% Similarity=0.172 Sum_probs=194.5
Q ss_pred ccccccccccCCceEEccCCCC---------CCHHHHHHHHHcCCCEEEecceechhhhhhhhhhhcccccccccCCCCC
Q psy4398 20 ANANQANINYSNKIILAPMVRM---------NTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDG 90 (306)
Q Consensus 20 ~~~~~~~l~l~n~i~lAPm~~~---------t~~~~r~~~~~~G~g~~~te~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 90 (306)
.|+++++++|+|||++|||+.. |+..++.+++++|+|+++||++.+.+.........++++. ..+.. +
T Consensus 7 ~P~~ig~~~l~NRiv~aPm~~~~a~~~~g~~t~~~~~~y~~rAg~GLiite~~~v~~~g~~~~~~~gi~~d-~~i~~--~ 83 (364)
T 1vyr_A 7 TPLKVGAVTAPNRVFMAPLTRLRSIEPGDIPTPLMGEYYRQRASAGLIISEATQISAQAKGYAGAPGLHSP-EQIAA--W 83 (364)
T ss_dssp SCEEETTEEESSSEEECCCCCCCCBTTTTBCCHHHHHHHHHTTTSSEEEEEEEESSSTTCCSTTCCBSSSH-HHHHH--H
T ss_pred CCeeECCEEECCccEECCCCCCcccCCCCCCCHHHHHHHHHHhcCCEEEEccccccccccCCCCCcccCCH-HHHHH--H
Confidence 5679999999999999999964 4566888888889999999999876543222222222221 11111 4
Q ss_pred ceeeecCCCCCCceEEEecC------------------------------------------CCH------------HHH
Q psy4398 91 SVVFRTCPREKNKIILQIGT------------------------------------------ADP------------ERA 116 (306)
Q Consensus 91 ~~~~~~~~~~~~p~ivql~g------------------------------------------~~~------------~~~ 116 (306)
+.+.+.+|+.+.++++||+| ..| ++|
T Consensus 84 ~~l~~~vh~~g~~i~~QL~H~Gr~~~~~~~~~g~~~~apS~i~~~~~~~~~~~~g~~~~~~~~~p~~mt~~eI~~~i~~f 163 (364)
T 1vyr_A 84 KKITAGVHAEDGRIAVQLWHTGRISHSSIQPGGQAPVSASALNANTRTSLRDENGNAIRVDTTTPRALELDEIPGIVNDF 163 (364)
T ss_dssp HHHHHHHHHTTCCEEEEEECCTTSSCGGGSGGGCCCEESSSCCCCSEEEEECTTSCEEEEECCCCEECCGGGHHHHHHHH
T ss_pred HHHHHHHHhcCCeEEEEeccCCcccCcccccCCCccccCCCcccccccccccccccccccCCCCCCcCCHHHHHHHHHHH
Confidence 55666777788999999975 122 689
Q ss_pred HHHHHHHhc-CCCEEEEccCC---------CccccccCCccccccCChHHHHHHHHHHHhccc-ccEEEEeccC--C---
Q psy4398 117 LEAAKKVEH-DVAAIDINMGC---------PKQFSLTGGMGAALLSTPDIACNILTTLISNLS-IPVSCKIRVF--H--- 180 (306)
Q Consensus 117 ~~aa~~~~~-g~d~veln~gc---------P~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~-~pv~vKir~g--~--- 180 (306)
+++|+++.+ |||+||||++| |..|.++|+||+++++|++++.|++++||++++ .||.||++.+ +
T Consensus 164 ~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~~v~vrls~~~~~~~~ 243 (364)
T 1vyr_A 164 RQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGIRVSPIGTFQNV 243 (364)
T ss_dssp HHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGEEEEECCSSCBTTB
T ss_pred HHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCCcEEEEEccccccccc
Confidence 999998875 99999999986 999999999999999999999999999999994 3999999975 2
Q ss_pred -----ChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhh----h
Q psy4398 181 -----NEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLN----C 251 (306)
Q Consensus 181 -----~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~----v 251 (306)
+.++..++++.|+++|+|+|++++++..+.. +..+++++++++.+++|||++||| ++++++++++.+ |
T Consensus 244 ~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~--~~~~~~~~~v~~~~~iPvi~~Ggi-t~~~a~~~l~~g~aD~V 320 (364)
T 1vyr_A 244 DNGPNEEADALYLIEELAKRGIAYLHMSETDLAGGK--PYSEAFRQKVRERFHGVIIGAGAY-TAEKAEDLIGKGLIDAV 320 (364)
T ss_dssp CCCTTHHHHHHHHHHHHHHTTCSEEEEECCBTTBCC--CCCHHHHHHHHHHCCSEEEEESSC-CHHHHHHHHHTTSCSEE
T ss_pred cCCCCCHHHHHHHHHHHHHhCCCEEEEecCcccCCC--cccHHHHHHHHHHCCCCEEEECCc-CHHHHHHHHHCCCccEE
Confidence 2345888999999999999999987543322 236789999999999999999999 899999999874 5
Q ss_pred hhccccCCCCCchHH
Q psy4398 252 AFLRNHYPVEKLPKT 266 (306)
Q Consensus 252 ~vGrall~~p~~~~~ 266 (306)
++||++++||++++.
T Consensus 321 ~~gR~~l~~P~~~~~ 335 (364)
T 1vyr_A 321 AFGRDYIANPDLVAR 335 (364)
T ss_dssp EESHHHHHCTTHHHH
T ss_pred EECHHHHhChhHHHH
Confidence 999999999988865
No 13
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=100.00 E-value=2.3e-37 Score=287.27 Aligned_cols=259 Identities=13% Similarity=0.118 Sum_probs=203.9
Q ss_pred ccccccccccCCceEEccCCCCCCHHHHHHHHHcCCCEEEecceechhhhh-----hhhhhhcccccccccCCCCCceee
Q psy4398 20 ANANQANINYSNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVK-----TERKVNDLLNTIDFVDPLDGSVVF 94 (306)
Q Consensus 20 ~~~~~~~l~l~n~i~lAPm~~~t~~~~r~~~~~~G~g~~~te~~~~~~~~~-----~~~~~~~~l~~~~~~~~~~~~~~~ 94 (306)
+++++.|++|+|||++|+++...+..+.......|+|++++++++.++... -.+...+++|++++.|+|....+.
T Consensus 38 L~~~~~Gl~~~NPv~lAaG~~~~~~e~~~~~~~~G~G~v~~ktvt~~pq~gnp~PR~~~~~~~~iN~~G~~n~G~~~~~~ 117 (345)
T 3oix_A 38 THTTIGSFDFDNCLMNAAGVYCMTREELAAIDHSEAGSFVTXTGTLEERAGNPQPRYADTKLGSINSMGLPNLGINYYLD 117 (345)
T ss_dssp CCEEETTEEESCSEEECTTSSCSSHHHHHHHHTSSCSBCBCCCBCSSCBCCSCSCCEEECSSEEEECCCCCBSCHHHHHH
T ss_pred cCeEECCEECCCCCEEcCCCCCCCHHHHHHHHHcCCCeEEeeeecCCCCCCCCCCcEEecccchhccCCCCChhHHHHHH
Confidence 889999999999999999998788777776668999999999999875421 112335789999999998654322
Q ss_pred ecC----CCCCCceEEEecCCCHHHHHHHHHHHhc-CCC-EEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc
Q psy4398 95 RTC----PREKNKIILQIGTADPERALEAAKKVEH-DVA-AIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL 168 (306)
Q Consensus 95 ~~~----~~~~~p~ivql~g~~~~~~~~aa~~~~~-g~d-~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~ 168 (306)
+.. ...+.|+++||+|.++++|.++++++++ +++ +||||++||+.. + |..++++++.+.++++++++.+
T Consensus 118 ~l~~~~~~~~~~pvivsI~g~~~~d~~~~a~~l~~~g~~d~ielNisCPn~~----G-~~~l~~~~e~l~~il~av~~~~ 192 (345)
T 3oix_A 118 YVTELQKQPDSKNHFLSLVGMSPEETHTILXMVEASKYQGLVELNLSCPNVP----G-XPQIAYDFETTDQILSEVFTYF 192 (345)
T ss_dssp HHHHHHHSTTCCCCEEEECCSSHHHHHHHHHHHHHSSCCSEEEEECSCCCST----T-CCCGGGCHHHHHHHHHHHTTTC
T ss_pred HHHHHhhccCCCCEEEEecCCCHHHHHHHHHHHhccCCCcEEEEecCCCCcC----C-chhhcCCHHHHHHHHHHHHHHh
Confidence 221 2346799999999999999999999974 776 999999999963 2 4677899999999999999999
Q ss_pred cccEEEEeccCCChHHHHHHHHHHHHcCCcEEE-------------EcccCC-------CCCCCCCC----cHHHHHHHH
Q psy4398 169 SIPVSCKIRVFHNEADTIALCKRLEACGIIAIG-------------VHGRTK-------AERPRHRN----RIEMIRTLT 224 (306)
Q Consensus 169 ~~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~-------------v~~~~~-------~~~~~~p~----~~~~v~~i~ 224 (306)
++||+||++.+. +..++++.++++|+++|+ ++.+.. .+.+++++ .++++++++
T Consensus 193 ~~PV~vKi~p~~---~~~~~a~~~~~aga~~i~~int~nt~g~~~~i~~~~~~~~~~~~~gGlSG~ai~p~a~~~v~~i~ 269 (345)
T 3oix_A 193 TKPLGIKLPPYF---DIVHFDQAAAIFNXYPLTFVNCINSIGNGLVIEDETVVIXPKNGFGGIGGDYVKPTALANVHAFY 269 (345)
T ss_dssp CSCEEEEECCCC---CHHHHHHHHHHHTTSCCSEEEECCCEEEEECEETTEESCSGGGGEEEEEEGGGHHHHHHHHHHHH
T ss_pred CCCeEEEECCCC---CHHHHHHHHHHhCCCceEEEEeecccccceeeccCccccccccccCCcCCccccHHHHHHHHHHH
Confidence 999999999654 355666666666655443 333221 12244443 478999999
Q ss_pred hhC--CCcEEEecCCCCHHHHHHHHHhh---hhhccc-cCCCCCc-hHH--HHHHHHHhcCCCCCcceehhhccceeeEE
Q psy4398 225 QHL--KIPVIANGGSKEIVDYGGVFSLN---CAFLRN-HYPVEKL-PKT--ILYAHCKYKRFEVPKYETVQYEKLFRSLV 295 (306)
Q Consensus 225 ~~~--~ipvia~GGI~s~~~~~~~l~~~---v~vGra-ll~~p~~-~~~--~l~~~~~~~g~~~~~~~~~~~~~~~~~~~ 295 (306)
+++ ++|||++|||.|.+|+.+.+..| |++||+ ++.||.+ .++ +|++||+++| |+++.
T Consensus 270 ~~~~~~ipIIg~GGI~s~~da~~~l~aGAd~V~igra~~~~gP~~~~~i~~~L~~~l~~~G--------------~~si~ 335 (345)
T 3oix_A 270 KRLNPSIQIIGTGGVXTGRDAFEHILCGASMVQIGTALHQEGPQIFKRITKELXAIMTEKG--------------YETLE 335 (345)
T ss_dssp TTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEEESHHHHHHCTHHHHHHHHHHHHHHHHHT--------------CCSGG
T ss_pred HHcCCCCcEEEECCCCChHHHHHHHHhCCCEEEEChHHHhcChHHHHHHHHHHHHHHHHcC--------------CCCHH
Confidence 999 79999999999999999999875 499999 7899944 444 9999999999 66666
Q ss_pred EEcCc
Q psy4398 296 TVNGK 300 (306)
Q Consensus 296 ~~~~~ 300 (306)
+++|+
T Consensus 336 e~~G~ 340 (345)
T 3oix_A 336 DFRGK 340 (345)
T ss_dssp GTTTC
T ss_pred HHHhH
Confidence 66665
No 14
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=100.00 E-value=3.7e-37 Score=290.32 Aligned_cols=260 Identities=16% Similarity=0.124 Sum_probs=205.3
Q ss_pred ccccccccccCCceEEccCCCCCCHHHHHHHHHcCCCEEEecceechhhhhh-----h--hhhhcccccccccCCCCCce
Q psy4398 20 ANANQANINYSNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKT-----E--RKVNDLLNTIDFVDPLDGSV 92 (306)
Q Consensus 20 ~~~~~~~l~l~n~i~lAPm~~~t~~~~r~~~~~~G~g~~~te~~~~~~~~~~-----~--~~~~~~l~~~~~~~~~~~~~ 92 (306)
+++++.|++|+|||++|++.+.+...+..+. +.|+|++.++++++.+.... . ....+++|.++|.|+|....
T Consensus 84 l~v~~~Gl~f~NPvglAAG~dk~~~~~~~l~-~lGfG~vevgtvT~~pq~GNp~PRlfrl~e~~aiiN~~GfnN~G~d~~ 162 (415)
T 3i65_A 84 ACTNIKHLDFINPFGVAAGFDKNGVCIDSIL-KLGFSFIEIGTITPRGQTGNAKPRIFRDVESRSIINSCGFNNMGCDKV 162 (415)
T ss_dssp GCEEETTEEESSSEEECTTSSTTCSSHHHHH-TTTCSEEEEEEECSSCBCCSCSCCEEEEGGGTEEEECCCSCBCCHHHH
T ss_pred ccEEECCEECCCCCEECCCCCCCHHHHHHHH-HcCCCeEEeCcccCCcCCCCCCCeEEeccCCCceeecCCCCchhHHHH
Confidence 7899999999999999999987777776665 78999999999998764311 1 13457899999999986433
Q ss_pred eeecCC---C-------CCCceEEEecCCC-----HHHHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHH
Q psy4398 93 VFRTCP---R-------EKNKIILQIGTAD-----PERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIA 157 (306)
Q Consensus 93 ~~~~~~---~-------~~~p~ivql~g~~-----~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~ 157 (306)
+.+..+ . ...++++||+++. +++|.++++++.+.+|+||||+|||++. |..++++++.+
T Consensus 163 ~~~l~~~~~~~~~~~~~~~~~vgvnIg~nk~t~~~~~Dy~~~a~~l~~~ad~ieiNiScPNt~------Gl~~lq~~~~l 236 (415)
T 3i65_A 163 TENLILFRKRQEEDKLLSKHIVGVSIGKNKDTVNIVDDLKYCINKIGRYADYIAINVSSPNTP------GLRDNQEAGKL 236 (415)
T ss_dssp HHHHHHHHHHHTTCGGGTTCEEEEEECCCTTCSCHHHHHHHHHHHHGGGCSEEEEECCCCC--------------CCHHH
T ss_pred HHHHHHHHhhccccccccCceEEEEeccccCccccHHHHHHHHHHHHhhCCEEEEECCCCCCC------CcccccCHHHH
Confidence 222110 0 1357999999887 8999999999988899999999999962 67788999999
Q ss_pred HHHHHHHHhc--------------------cccc-EEEEeccCCChHHHHHHHHHHHHcCCcEEEEcccCCC--------
Q psy4398 158 CNILTTLISN--------------------LSIP-VSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKA-------- 208 (306)
Q Consensus 158 ~eiv~~v~~~--------------------~~~p-v~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~-------- 208 (306)
.++++++++. ..+| |+||++.+++.++..++|+.++++|+|+|++++++..
T Consensus 237 ~~ll~aV~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~VKi~pd~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~ 316 (415)
T 3i65_A 237 KNIILSVKEEIDNLEKNNIMNDEFLWFNTTKKKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFE 316 (415)
T ss_dssp HHHHHHHHHHHHHHHHHCCSCHHHHCCSSSSSCCEEEEEECSCCCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGT
T ss_pred HHHHHHHHHHHHhhcccccccccccccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccc
Confidence 9999999876 2689 9999998777778999999999999999999987642
Q ss_pred ---CCCCCCC----cHHHHHHHHhhC--CCcEEEecCCCCHHHHHHHHHhh---hhhccccCCC-CCch-HH--HHHHHH
Q psy4398 209 ---ERPRHRN----RIEMIRTLTQHL--KIPVIANGGSKEIVDYGGVFSLN---CAFLRNHYPV-EKLP-KT--ILYAHC 272 (306)
Q Consensus 209 ---~~~~~p~----~~~~v~~i~~~~--~ipvia~GGI~s~~~~~~~l~~~---v~vGrall~~-p~~~-~~--~l~~~~ 272 (306)
+.+++++ .+++++++++++ ++|||++|||.|.+|+.+++..| ||+||+++.+ |.+. ++ +|++||
T Consensus 317 ~~~GGlSG~a~~p~al~~I~~v~~~v~~~iPIIg~GGI~s~eDa~e~l~aGAd~VqIgra~l~~GP~~~~~i~~~L~~~l 396 (415)
T 3i65_A 317 NKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLDALEKIEAGASVCQLYSCLVFNGMKSAVQIKRELNHLL 396 (415)
T ss_dssp TCCSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEECSSCCSHHHHHHHHHHTEEEEEESHHHHHHGGGHHHHHHHHHHHHH
T ss_pred cccCCcCCccchHHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHhcCHHHHHHHHHHHHHHH
Confidence 2344443 458999999999 79999999999999999999885 4999998654 8544 44 999999
Q ss_pred HhcCCCCCcceehhhccceeeEEEEcCc
Q psy4398 273 KYKRFEVPKYETVQYEKLFRSLVTVNGK 300 (306)
Q Consensus 273 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 300 (306)
+++| |+|+.+++|+
T Consensus 397 ~~~G--------------~~si~e~~G~ 410 (415)
T 3i65_A 397 YQRG--------------YYNLKEAIGR 410 (415)
T ss_dssp HHTT--------------CSSSTTTTTT
T ss_pred HHcC--------------CCCHHHHhCh
Confidence 9999 6666666664
No 15
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=100.00 E-value=5.1e-37 Score=282.56 Aligned_cols=263 Identities=14% Similarity=0.111 Sum_probs=209.0
Q ss_pred cccccccccccCCceEEccCCCCCCHHHHHHHHHcCCCEEEecceechhhhhh-----hhhhhcccccccccCCCCCcee
Q psy4398 19 MANANQANINYSNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKT-----ERKVNDLLNTIDFVDPLDGSVV 93 (306)
Q Consensus 19 ~~~~~~~~l~l~n~i~lAPm~~~t~~~~r~~~~~~G~g~~~te~~~~~~~~~~-----~~~~~~~l~~~~~~~~~~~~~~ 93 (306)
++|++++|++|+|||++||+....+..++..+.++|+|+++|+++++++.... .+...+++|.+++.|++.....
T Consensus 1 ~l~~~i~g~~l~npv~~Aag~~~~~~~~~~~~~~~G~g~i~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~~g~~~~~ 80 (311)
T 1jub_A 1 MLNTTFANAKFANPFMNASGVHCMTIEDLEELKASQAGAYITKSSTLEKREGNPLPRYVDLELGSINSMGLPNLGFDYYL 80 (311)
T ss_dssp CCCEEETTEEESSSEEECTTSSCSSHHHHHHHHHSSCSCCBCCCBCSSCBCCSCSCCEEEETTEEEECCCCCBSCHHHHH
T ss_pred CCceEECCEEcCCCcEECCCCCCCCHHHHHHHHHCCCCEEEeCccCCcccCCCCCCcEEecccceeecCCCCCccHHHHH
Confidence 36889999999999999998733477787777899999999999998764211 1122466788888887643211
Q ss_pred e--ecCC-CC--CCceEEEecCCCHHHHHHHHHHHhc-CCC-EEEEccCCCccccccCCccccccCChHHHHHHHHHHHh
Q psy4398 94 F--RTCP-RE--KNKIILQIGTADPERALEAAKKVEH-DVA-AIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLIS 166 (306)
Q Consensus 94 ~--~~~~-~~--~~p~ivql~g~~~~~~~~aa~~~~~-g~d-~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~ 166 (306)
. .... .. +.|+++||.+.++++|.++++++++ |+| +||||++||+. .. +..+..+++.+.++++++++
T Consensus 81 ~~~~~~~~~~~~~~p~~~~i~g~~~~~~~~~a~~~~~~g~d~~iein~~~P~~-~g----~~~~g~~~e~~~~iv~~vr~ 155 (311)
T 1jub_A 81 DYVLKNQKENAQEGPIFFSIAGMSAAENIAMLKKIQESDFSGITELNLSCPNV-PG----EPQLAYDFEATEKLLKEVFT 155 (311)
T ss_dssp HHHHHHHHHTCSSSCCEEEECCSSHHHHHHHHHHHHHSCCCSEEEEESCCCCS-SS----CCCGGGCHHHHHHHHHHHTT
T ss_pred HHHHHHHHhcCCCCCEEEEcCCCCHHHHHHHHHHHHhcCCCeEEEEeccCCCC-CC----cccccCCHHHHHHHHHHHHH
Confidence 1 1111 12 6799999999999999999999975 999 99999999996 11 34555689999999999999
Q ss_pred cccccEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcccC-----CC--------------CCCCCC----CcHHHHHHH
Q psy4398 167 NLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRT-----KA--------------ERPRHR----NRIEMIRTL 223 (306)
Q Consensus 167 ~~~~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~-----~~--------------~~~~~p----~~~~~v~~i 223 (306)
.+++||++|++.+++.++..++|+.++++|+|+|++++++ .+ +.++++ ..+++++++
T Consensus 156 ~~~~Pv~vKi~~~~~~~~~~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v 235 (311)
T 1jub_A 156 FFTKPLGVKLPPYFDLVHFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAF 235 (311)
T ss_dssp TCCSCEEEEECCCCSHHHHHHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHH
T ss_pred hcCCCEEEEECCCCCHHHHHHHHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHH
Confidence 9999999999987777788999999999999999998864 11 112232 348899999
Q ss_pred HhhC--CCcEEEecCCCCHHHHHHHHHhh---hhhccccCC-CCCch-HH--HHHHHHHhcCCCCCcceehhhccceeeE
Q psy4398 224 TQHL--KIPVIANGGSKEIVDYGGVFSLN---CAFLRNHYP-VEKLP-KT--ILYAHCKYKRFEVPKYETVQYEKLFRSL 294 (306)
Q Consensus 224 ~~~~--~ipvia~GGI~s~~~~~~~l~~~---v~vGrall~-~p~~~-~~--~l~~~~~~~g~~~~~~~~~~~~~~~~~~ 294 (306)
++.+ ++|||++|||.|.+|+.++++.| |++||+++. ||.+. ++ ++++||+++| |+|+
T Consensus 236 ~~~~~~~ipvi~~GGI~~~~da~~~l~~GAd~V~vg~~~l~~~p~~~~~i~~~l~~~l~~~g--------------~~si 301 (311)
T 1jub_A 236 YTRLKPEIQIIGTGGIETGQDAFEHLLCGATMLQIGTALHKEGPAIFDRIIKELEEIMNQKG--------------YQSI 301 (311)
T ss_dssp HTTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHHCTHHHHHHHHHHHHHHHHHT--------------CCSG
T ss_pred HHhcCCCCCEEEECCCCCHHHHHHHHHcCCCEEEEchHHHhcCcHHHHHHHHHHHHHHHHcC--------------CCCH
Confidence 9999 89999999999999999999875 499999996 99544 43 9999999999 6666
Q ss_pred EEEcCc
Q psy4398 295 VTVNGK 300 (306)
Q Consensus 295 ~~~~~~ 300 (306)
.+++|+
T Consensus 302 ~e~~g~ 307 (311)
T 1jub_A 302 ADFHGK 307 (311)
T ss_dssp GGTTTC
T ss_pred HHHhCh
Confidence 666664
No 16
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=100.00 E-value=5.1e-37 Score=288.94 Aligned_cols=244 Identities=15% Similarity=0.151 Sum_probs=189.4
Q ss_pred ccccccccccCCceEEccCCCCC-------CHHHHHHHHHc-CCCEEEecceechhhhhhhhhhhcccccccccCCCCCc
Q psy4398 20 ANANQANINYSNKIILAPMVRMN-------TLPFRLLALDY-GADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDGS 91 (306)
Q Consensus 20 ~~~~~~~l~l~n~i~lAPm~~~t-------~~~~r~~~~~~-G~g~~~te~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 91 (306)
.|+++++++|+|||++|||+..+ +.....+.+++ |+|+++||++.+.+.........++++ ...+.. ++
T Consensus 18 ~P~~ig~~~l~NRiv~aPm~~~~a~~g~pt~~~~~yy~~rA~g~GLiite~~~v~~~g~~~~~~~gi~~-d~~i~~--~k 94 (376)
T 1icp_A 18 SPCKMGKFELCHRVVLAPLTRQRSYGYIPQPHAILHYSQRSTNGGLLIGEATVISETGIGYKDVPGIWT-KEQVEA--WK 94 (376)
T ss_dssp SCEEETTEEESCSEEECCCCCCCCGGGSCCHHHHHHHHHTCCTTCEEECCCEECSGGGCCSTTCCBCSS-HHHHHH--HH
T ss_pred CCeeECCEEECCccEECCcCcCcCCCCCCCHHHHHHHHHhcCCeeEEEECceeeccccccCcccCccCC-HHHHHH--HH
Confidence 67899999999999999999754 33333344344 799999999988754332222222222 111111 45
Q ss_pred eeeecCCCCCCceEEEecCC--------------------------------------CH------------HHHHHHHH
Q psy4398 92 VVFRTCPREKNKIILQIGTA--------------------------------------DP------------ERALEAAK 121 (306)
Q Consensus 92 ~~~~~~~~~~~p~ivql~g~--------------------------------------~~------------~~~~~aa~ 121 (306)
.+.+.+|+.|.++++||+|. .| ++|+++|+
T Consensus 95 ~l~~avh~~G~~i~~QL~H~Gr~~~~~~~~~~~~~~apS~~~~~~~~~~~~~~~~~~~~p~~mt~~eI~~~i~~f~~AA~ 174 (376)
T 1icp_A 95 PIVDAVHAKGGIFFCQIWHVGRVSNKDFQPNGEDPISCTDRGLTPQIMSNGIDIAHFTRPRRLTTDEIPQIVNEFRVAAR 174 (376)
T ss_dssp HHHHHHHHTTCEEEEEEECCTTSSCTTTSGGGCCCEESSSCCCCCEECTTSSCEECCCCCEECCTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCeEEEEeecCCCCcCcccccCCCceecCCCCCCccccccccccccCCCCCCcCCHHHHHHHHHHHHHHHH
Confidence 56667777889999999871 12 68999999
Q ss_pred HHhc-CCCEEEEccCC---------CccccccCCccccccCChHHHHHHHHHHHhcccc-cEEEEeccC---------CC
Q psy4398 122 KVEH-DVAAIDINMGC---------PKQFSLTGGMGAALLSTPDIACNILTTLISNLSI-PVSCKIRVF---------HN 181 (306)
Q Consensus 122 ~~~~-g~d~veln~gc---------P~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~-pv~vKir~g---------~~ 181 (306)
++.+ |||+||||++| |..|.++|+||+++++|++++.|++++||++++. ||.||++.. ++
T Consensus 175 ~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~V~vrls~~~~~~g~~~~~~ 254 (376)
T 1icp_A 175 NAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSDRVGIRISPFAHYNEAGDTNP 254 (376)
T ss_dssp HHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCTTTCCCSCH
T ss_pred HHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhcCCceEEEeccccccCCCCCCCC
Confidence 9874 99999999986 9999999999999999999999999999999953 999999963 12
Q ss_pred hHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhh----hhhcccc
Q psy4398 182 EADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLN----CAFLRNH 257 (306)
Q Consensus 182 ~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~----v~vGral 257 (306)
.++..++++.|+++|+|+|++++++.........++++++++++.+++|||++||| +.++++++++.+ |++||++
T Consensus 255 ~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~vr~~~~iPvi~~G~i-~~~~a~~~l~~g~aD~V~~gR~~ 333 (376)
T 1icp_A 255 TALGLYMVESLNKYDLAYCHVVEPRMKTAWEKIECTESLVPMRKAYKGTFIVAGGY-DREDGNRALIEDRADLVAYGRLF 333 (376)
T ss_dssp HHHHHHHHHHHGGGCCSEEEEECCSCCC------CCCCSHHHHHHCCSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCCcccCCCCccccHHHHHHHHHHcCCCEEEeCCC-CHHHHHHHHHCCCCcEEeecHHH
Confidence 34689999999999999999998764322212235567899999999999999999 899999999874 5999999
Q ss_pred CCCCCchHHH
Q psy4398 258 YPVEKLPKTI 267 (306)
Q Consensus 258 l~~p~~~~~~ 267 (306)
++||+++++.
T Consensus 334 l~~P~l~~k~ 343 (376)
T 1icp_A 334 ISNPDLPKRF 343 (376)
T ss_dssp HHCTTHHHHH
T ss_pred HhCccHHHHH
Confidence 9999888653
No 17
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=100.00 E-value=2.3e-36 Score=283.62 Aligned_cols=245 Identities=15% Similarity=0.159 Sum_probs=195.1
Q ss_pred ccccccccccCCceEEccCCCC-------CCHHHHHHH--HHcCCCEEEecceechhhhhhhhhhhcccccccccCCCCC
Q psy4398 20 ANANQANINYSNKIILAPMVRM-------NTLPFRLLA--LDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDG 90 (306)
Q Consensus 20 ~~~~~~~l~l~n~i~lAPm~~~-------t~~~~r~~~--~~~G~g~~~te~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 90 (306)
.|+++++++|+|||++|||+.. |+.....+. +++|+|+++||.+.+.+.........+++ +...+.. +
T Consensus 6 ~P~~ig~~~l~NRiv~apm~~~~~~~g~~~~~~~~~y~~rA~gG~Glii~e~~~v~~~g~~~~~~~~i~-~d~~i~~--~ 82 (363)
T 3l5l_A 6 EPYTLKDVTLRNRIAIPPMCQYMAEDGMINDWHHVHLAGLARGGAGLLVVEATAVAPEGRITPGCAGIW-SDAHAQA--F 82 (363)
T ss_dssp SCEEETTEEESSSEEECCCCCCCCBTTBCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTCCBCS-SHHHHHH--H
T ss_pred CCeeECCEEeeCceEECCCCCCcCCCCCCCHHHHHHHHHHHccCceEEEecceeeCccccCCCCcceec-CHHHHHH--H
Confidence 6779999999999999999953 334444443 25789999999998776543333222332 2222322 5
Q ss_pred ceeeecCCCCCCceEEEecCC------------------------------------C----------------HHHHHH
Q psy4398 91 SVVFRTCPREKNKIILQIGTA------------------------------------D----------------PERALE 118 (306)
Q Consensus 91 ~~~~~~~~~~~~p~ivql~g~------------------------------------~----------------~~~~~~ 118 (306)
+.+.+.+|+.|.++++||++. + .++|++
T Consensus 83 ~~~~~~vh~~G~~i~~QL~H~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~pS~~~~~~~~~~~p~~mt~~eI~~ii~~f~~ 162 (363)
T 3l5l_A 83 VPVVQAIKAAGSVPGIQIAHAGRKASANRPWEGDDHIAADDTRGWETIAPSAIAFGAHLPKVPREMTLDDIARVKQDFVD 162 (363)
T ss_dssp HHHHHHHHHTTCEEEEEEECCGGGCSBCCGGGTSSBCCTTCTTCCCCEESSSCCCBTTBCCCCEECCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCEEEEEeccCCccccccccccccccccccccCCCcccCCCCCccCCCCCCCCccCCHHHHHHHHHHHHH
Confidence 667788888888999999641 0 257999
Q ss_pred HHHHHhc-CCCEEEEccC---------CCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEeccC-------
Q psy4398 119 AAKKVEH-DVAAIDINMG---------CPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIRVF------- 179 (306)
Q Consensus 119 aa~~~~~-g~d~veln~g---------cP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g------- 179 (306)
+|+++++ |||+||||++ ||+.|.|+|+||+++++|++++.|++++||+++ ++||.||++..
T Consensus 163 aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~pV~vRis~~~~~~~G~ 242 (363)
T 3l5l_A 163 AARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENLPLTARFGVLEYDGRDE 242 (363)
T ss_dssp HHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTSCEEEEEEEECSSSCHH
T ss_pred HHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCceEEEEecchhcCCCCC
Confidence 9999975 9999999987 799999999999999999999999999999999 57999999962
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEcccCCCCC---CCCC-CcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhh----h
Q psy4398 180 HNEADTIALCKRLEACGIIAIGVHGRTKAER---PRHR-NRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLN----C 251 (306)
Q Consensus 180 ~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~---~~~p-~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~----v 251 (306)
++.++..++++.|+++|+|+|+++.+..... ..++ .++++++++++.+++|||++|||+|+++++++++.+ |
T Consensus 243 ~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~GgI~s~e~a~~~l~~G~aD~V 322 (363)
T 3l5l_A 243 QTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREAKLPVTSAWGFGTPQLAEAALQANQLDLV 322 (363)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHTCCEEECSSTTSHHHHHHHHHTTSCSEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHCCCccEE
Confidence 4567899999999999999999987532211 1122 478899999999999999999999999999999875 5
Q ss_pred hhccccCCCCCchHHH
Q psy4398 252 AFLRNHYPVEKLPKTI 267 (306)
Q Consensus 252 ~vGrall~~p~~~~~~ 267 (306)
++||++++||.+++..
T Consensus 323 ~iGR~~lanPdl~~k~ 338 (363)
T 3l5l_A 323 SVGRAHLADPHWAYFA 338 (363)
T ss_dssp ECCHHHHHCTTHHHHH
T ss_pred EecHHHHhCchHHHHH
Confidence 9999999999888663
No 18
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=100.00 E-value=3.5e-36 Score=287.13 Aligned_cols=251 Identities=16% Similarity=0.105 Sum_probs=204.5
Q ss_pred ccccccccccCCceEEccCCCCCCHHHHHHHHHcCCCEEEecceechhhhh--h---h--hhhhcccccccccCCCCCce
Q psy4398 20 ANANQANINYSNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVK--T---E--RKVNDLLNTIDFVDPLDGSV 92 (306)
Q Consensus 20 ~~~~~~~l~l~n~i~lAPm~~~t~~~~r~~~~~~G~g~~~te~~~~~~~~~--~---~--~~~~~~l~~~~~~~~~~~~~ 92 (306)
+|++++|++|+|||++|++.+.....++.+. +.|+|+++++++++.+... . . ....+++|.+++.|+|....
T Consensus 82 l~~~i~Gl~~~NPvglAAG~dk~~~~~~~l~-~~GfG~v~~gtvT~~pq~GNp~PR~~rl~e~~~iiN~~GfnN~G~~~~ 160 (443)
T 1tv5_A 82 ACTNIKHLDFINPFGVAAGFDKNGVCIDSIL-KLGFSFIEIGTITPRGQTGNAKPRIFRDVESRSIINSCGFNNMGCDKV 160 (443)
T ss_dssp GCEEETTEEESSSEEECTTTTTTCSSHHHHH-TTTCSEEEEEEECSSCBCCSCSCCEEEETTTTEEEECCCSCBSCHHHH
T ss_pred CCeEECCEEeCCCcEECCcccCccHHHHHHH-hcCCCEEEEeeeecCCCCCCCCccEEeccccceeeeccccCChhHHHH
Confidence 7999999999999999999987777777764 7899999999999876431 1 1 12247899999999875432
Q ss_pred eeecCC----C-------CCCceEEEecCCC-----HHHHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHH
Q psy4398 93 VFRTCP----R-------EKNKIILQIGTAD-----PERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDI 156 (306)
Q Consensus 93 ~~~~~~----~-------~~~p~ivql~g~~-----~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~ 156 (306)
.. .++ . ...|+++||+++. +++|.++++++.+++|+||||++||+++ |...+++++.
T Consensus 161 ~~-~l~~~~~~~~~~~~~~~~~vgvni~~~~~~~~~~~dy~~~a~~l~~~aD~ieiNiscPnt~------Glr~lq~~~~ 233 (443)
T 1tv5_A 161 TE-NLILFRKRQEEDKLLSKHIVGVSIGKNKDTVNIVDDLKYCINKIGRYADYIAINVSSPNTP------GLRDNQEAGK 233 (443)
T ss_dssp HH-HHHHHHHHHHHCSTTTTCEEEEEECCCTTCSCHHHHHHHHHHHHGGGCSEEEEECCCTTST------TGGGGGSHHH
T ss_pred HH-HHHHHhhhcccccccCCceEEEEecCcccchHHHHHHHHHHHHHhcCCCEEEEeccCCCCc------ccccccCHHH
Confidence 11 111 0 1358999999987 8999999999988999999999999963 6778889999
Q ss_pred HHHHHHHHHhc--------------------------------------------------cccc-EEEEeccCCChHHH
Q psy4398 157 ACNILTTLISN--------------------------------------------------LSIP-VSCKIRVFHNEADT 185 (306)
Q Consensus 157 ~~eiv~~v~~~--------------------------------------------------~~~p-v~vKir~g~~~~~~ 185 (306)
+.+++++|+++ .++| |+||++.+++.++.
T Consensus 234 l~~il~~v~~~~~~~~~~~~~~~g~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~vKispd~~~ed~ 313 (443)
T 1tv5_A 234 LKNIILSVKEEIDNLEKNNIMNDESTYNEDNKIVEKKNNFNKNNSHMMKDAKDNFLWFNTTKKKPLVFVKLAPDLNQEQK 313 (443)
T ss_dssp HHHHHHHHHHHHHHHC--------------------------------------CCCCSSSSSCCEEEEEECSCCCHHHH
T ss_pred HHHHHHHHHHHHhhhcccCccccccCHHHHHHHHHHhhcccccchhhhhhhhhcchhcccCCCCCeEEEEeCCCCCHHHH
Confidence 99999999864 3578 99999987777789
Q ss_pred HHHHHHHHHcCCcEEEEcccCCC-----------CCCCCC----CcHHHHHHHHhhC--CCcEEEecCCCCHHHHHHHHH
Q psy4398 186 IALCKRLEACGIIAIGVHGRTKA-----------ERPRHR----NRIEMIRTLTQHL--KIPVIANGGSKEIVDYGGVFS 248 (306)
Q Consensus 186 ~~~a~~l~~~G~d~i~v~~~~~~-----------~~~~~p----~~~~~v~~i~~~~--~ipvia~GGI~s~~~~~~~l~ 248 (306)
.++|+.++++|+|+|++++++.. +.++++ ..+++++++++++ ++|||++|||.|.+|+.++++
T Consensus 314 ~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iPVIg~GGI~s~~DA~e~l~ 393 (443)
T 1tv5_A 314 KEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLDALEKIE 393 (443)
T ss_dssp HHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCcEEEECCCCCHHHHHHHHH
Confidence 99999999999999999988652 122232 2478999999999 899999999999999999998
Q ss_pred hh---hhhccccCC-CCCchH-H--HHHHHHHhcCCC
Q psy4398 249 LN---CAFLRNHYP-VEKLPK-T--ILYAHCKYKRFE 278 (306)
Q Consensus 249 ~~---v~vGrall~-~p~~~~-~--~l~~~~~~~g~~ 278 (306)
.| ||+||+++. ||.+.+ + ++++||+++|++
T Consensus 394 aGAd~Vqigrall~~gP~l~~~i~~~l~~~l~~~G~~ 430 (443)
T 1tv5_A 394 AGASVCQLYSCLVFNGMKSAVQIKRELNHLLYQRGYY 430 (443)
T ss_dssp TTEEEEEESHHHHHHGGGHHHHHHHHHHHHHHHHTCS
T ss_pred cCCCEEEEcHHHHhcChHHHHHHHHHHHHHHHHhCCC
Confidence 85 499999765 995554 3 899999999943
No 19
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=100.00 E-value=3.5e-36 Score=285.33 Aligned_cols=244 Identities=14% Similarity=0.116 Sum_probs=190.8
Q ss_pred ccccccccccCCceEEccCCCCC-------CHHHHHHHHHc-CCCEEEecceechhhhhhhhhhhcccccccccCCCCCc
Q psy4398 20 ANANQANINYSNKIILAPMVRMN-------TLPFRLLALDY-GADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDGS 91 (306)
Q Consensus 20 ~~~~~~~l~l~n~i~lAPm~~~t-------~~~~r~~~~~~-G~g~~~te~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 91 (306)
.|++|++++|+|||++|||+..+ +.....+..++ |+|+++||++.+.+.........++++ ...+.. ++
T Consensus 20 ~P~~ig~~~L~NRiv~aPm~~~~a~~g~pt~~~~~yy~~rA~G~GLIitE~~~v~~~g~~~~~~~gi~~-d~~i~~--~k 96 (402)
T 2hsa_B 20 SPYKMGKFNLSHRVVLAPMTRCRALNNIPQAALGEYYEQRATAGGFLITEGTMISPTSAGFPHVPGIFT-KEQVRE--WK 96 (402)
T ss_dssp SCEEETTEEESCSEEECCCCCCCSGGGCCCHHHHHHHHHHCCTTCEEECCCEESSTTCCCSTTCCBCSS-HHHHHH--HH
T ss_pred CCeeECCEEecCCeEECCCCCCcCCCCCCCHHHHHHHHHHhccCCEEEecceeeccccccCCCCcccCC-HHHHHH--HH
Confidence 67899999999999999999654 23333333333 599999999988654332222222222 122211 45
Q ss_pred eeeecCCCCCCceEEEecC----------------------------------------CCH------------HHHHHH
Q psy4398 92 VVFRTCPREKNKIILQIGT----------------------------------------ADP------------ERALEA 119 (306)
Q Consensus 92 ~~~~~~~~~~~p~ivql~g----------------------------------------~~~------------~~~~~a 119 (306)
.+.+.+|+.|.++++||++ ..| ++|+++
T Consensus 97 ~l~~avh~~G~~i~~QL~H~Gr~~~~~~~~~g~~~~apS~v~~~~~~~~~~~~g~~~~~~~p~~mt~~eI~~ii~~f~~A 176 (402)
T 2hsa_B 97 KIVDVVHAKGAVIFCQLWHVGRASHEVYQPAGAAPISSTEKPISNRWRILMPDGTHGIYPKPRAIGTYEISQVVEDYRRS 176 (402)
T ss_dssp HHHHHHHHTTCEEEEEEECCTTSCCGGGCTTCCCCEESCSCCCCTTCEEECTTSCEEECCCCEECCGGGHHHHHHHHHHH
T ss_pred HHHHHHHhcCCeEEEEeccCCcccccccccCCCccccCCCcccccccccccccccccCCCCCccCCHHHHHHHHHHHHHH
Confidence 5667777788999999985 112 689999
Q ss_pred HHHHhc-CCCEEEEccCC---------CccccccCCccccccCChHHHHHHHHHHHhccc-ccEEEEeccCC--------
Q psy4398 120 AKKVEH-DVAAIDINMGC---------PKQFSLTGGMGAALLSTPDIACNILTTLISNLS-IPVSCKIRVFH-------- 180 (306)
Q Consensus 120 a~~~~~-g~d~veln~gc---------P~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~-~pv~vKir~g~-------- 180 (306)
|+++++ |||+||||++| |..|.++|+||+++++|++++.||+++||++++ .||.||++.+.
T Consensus 177 A~~a~~AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGGslenR~rf~~Eiv~aVr~avg~~~V~vRls~~~~~~g~~~~ 256 (402)
T 2hsa_B 177 ALNAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSAIGADRVGVRVSPAIDHLDAMDS 256 (402)
T ss_dssp HHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECSSCCSTTCCCS
T ss_pred HHHHHHcCCCEEEECCccchHHHhccCCccCccCCccCcChhhhhHHHHHHHHHHHHHhCCCcEEEEeccccccCCCCCC
Confidence 999874 99999999986 999999999999999999999999999999995 59999999741
Q ss_pred -ChHHHHHHHHHHHHcC------CcEEEEcccCCCCCCCCC--------CcHHHHHHHHhhCCCcEEEecCCCCHHHHHH
Q psy4398 181 -NEADTIALCKRLEACG------IIAIGVHGRTKAERPRHR--------NRIEMIRTLTQHLKIPVIANGGSKEIVDYGG 245 (306)
Q Consensus 181 -~~~~~~~~a~~l~~~G------~d~i~v~~~~~~~~~~~p--------~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~ 245 (306)
+.++..++++.|+++| +|+|++++++....+..| ..+++++++++.+++|||++||| +++++++
T Consensus 257 ~~~~~~~~la~~le~~G~~gg~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vk~~~~iPvi~~G~i-~~~~a~~ 335 (402)
T 2hsa_B 257 NPLSLGLAVVERLNKIQLHSGSKLAYLHVTQPRYVAYGQTEAGRLGSEEEEARLMRTLRNAYQGTFICSGGY-TRELGIE 335 (402)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTSCCSEEEEECCCCCTTTTSSSTTTTHHHHHHHHHHHHHHHCSSCEEEESSC-CHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCccCCceEEEEEecCccccccCCccccccCCcchHHHHHHHHHHCCCCEEEeCCC-CHHHHHH
Confidence 2356899999999999 999999987654312112 25788999999999999999999 9999999
Q ss_pred HHHh----hhhhccccCCCCCchHHH
Q psy4398 246 VFSL----NCAFLRNHYPVEKLPKTI 267 (306)
Q Consensus 246 ~l~~----~v~vGrall~~p~~~~~~ 267 (306)
+++. +|++||++++||+++++.
T Consensus 336 ~l~~g~aD~V~igR~~l~dP~l~~k~ 361 (402)
T 2hsa_B 336 AVAQGDADLVSYGRLFISNPDLVMRI 361 (402)
T ss_dssp HHHTTSCSEEEESHHHHHCTTHHHHH
T ss_pred HHHCCCCceeeecHHHHhCchHHHHH
Confidence 9987 459999999999888763
No 20
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=100.00 E-value=8.2e-36 Score=300.69 Aligned_cols=260 Identities=14% Similarity=0.139 Sum_probs=202.6
Q ss_pred ccccccccccCCceEEccCCC-CCCHH---------HHHHHHHcCCCEEEecceechhhhhhhhhhhcccccccccCCCC
Q psy4398 20 ANANQANINYSNKIILAPMVR-MNTLP---------FRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLD 89 (306)
Q Consensus 20 ~~~~~~~l~l~n~i~lAPm~~-~t~~~---------~r~~~~~~G~g~~~te~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 89 (306)
.|+++++++|+|||++|||+. .++.. |+..+ ++|+|+++||++++.+.........++++ ...+..
T Consensus 7 ~p~~ig~~~l~nRi~~apm~~~~~~~~~~~~~~~~~y~~ra-~gg~gliite~~~v~~~~~~~~~~~~~~~-~~~~~~-- 82 (671)
T 1ps9_A 7 APLDLGFTTLKNRVLMGSMHTGLEEYPDGAERLAAFYAERA-RHGVALIVSGGIAPDLTGVGMEGGAMLND-ASQIPH-- 82 (671)
T ss_dssp CCEECSSCEESSSEEECCCCCSCTTSTTHHHHHHHHHHHHH-HTTCSEEEEEEEBSSSTTCSBTTCCBCCS-GGGHHH--
T ss_pred CCeeECCEEEcCceEECCccCCcCCCCCCcHHHHHHHHHHh-cCCCCEEEecccccCccccCCCCCCccCC-HHHHHH--
Confidence 577999999999999999996 33311 33334 67999999999987654322222222222 222221
Q ss_pred CceeeecCCCCCCceEEEecCC----------------------CH------------HHHHHHHHHHhc-CCCEEEEcc
Q psy4398 90 GSVVFRTCPREKNKIILQIGTA----------------------DP------------ERALEAAKKVEH-DVAAIDINM 134 (306)
Q Consensus 90 ~~~~~~~~~~~~~p~ivql~g~----------------------~~------------~~~~~aa~~~~~-g~d~veln~ 134 (306)
++.+.+.+|+.+.++++||+|. .| ++|+++|+++++ |||+||||+
T Consensus 83 ~~~~~~~vh~~g~~i~~Ql~h~Gr~~~~~~~~~ps~~~~~~~~~~p~~~t~~ei~~~i~~~~~aA~~a~~aGfd~veih~ 162 (671)
T 1ps9_A 83 HRTITEAVHQEGGKIALQILHTGRYSYQPHLVAPSALQAPINRFVPHELSHEEILQLIDNFARCAQLAREAGYDGVEVMG 162 (671)
T ss_dssp HHHHHHHHHHTTCCEEEEECCCGGGSBSTTCEESSSCCCTTCSSCCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred HHHHHHHHHhcCCEEEEEeccCCcccCCCCCcCCCCcccccCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcc
Confidence 4556667777899999999974 22 689999998875 999999999
Q ss_pred CC---------CccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEecc------CCChHHHHHHHHHHHHcCC
Q psy4398 135 GC---------PKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIRV------FHNEADTIALCKRLEACGI 197 (306)
Q Consensus 135 gc---------P~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~------g~~~~~~~~~a~~l~~~G~ 197 (306)
+| |+.|.++|+||+++++|++++.|+++++|+++ ++|+.+|++. |++.++..++++.++++|+
T Consensus 163 ~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~~~v~vrls~~~~~~~g~~~~~~~~~a~~l~~~g~ 242 (671)
T 1ps9_A 163 SEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDLVEDGGTFAETVELAQAIEAAGA 242 (671)
T ss_dssp CBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEECCSTTCCCHHHHHHHHHHHHHHTC
T ss_pred ccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcCCCceEEEEECccccCCCCCCHHHHHHHHHHHHhcCC
Confidence 86 99999999999999999999999999999999 7899999996 5677889999999999999
Q ss_pred cEEEEcccCCCCC------CCCC-CcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhh----hhhccccCCCCCchHH
Q psy4398 198 IAIGVHGRTKAER------PRHR-NRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLN----CAFLRNHYPVEKLPKT 266 (306)
Q Consensus 198 d~i~v~~~~~~~~------~~~p-~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~----v~vGrall~~p~~~~~ 266 (306)
|+|+++++..+.. +.++ ..+++++++++.+++|||++|||+|+++++++++.+ +++||++++||++++.
T Consensus 243 d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~iPvi~~Ggi~~~~~a~~~l~~g~aD~V~~gR~~l~~P~l~~k 322 (671)
T 1ps9_A 243 TIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHVSLPLVTTNRINDPQVADDILSRGDADMVSMARPFLADAELLSK 322 (671)
T ss_dssp SEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTTSCSSCEEECSSCCSHHHHHHHHHTTSCSEEEESTHHHHCTTHHHH
T ss_pred CEEEcCCCccccccccccccCCcchHHHHHHHHHHhcCceEEEeCCCCCHHHHHHHHHcCCCCEEEeCHHHHhCcHHHHH
Confidence 9999986543321 1122 357899999999999999999999999999999874 5999999999988876
Q ss_pred HHHHHHHhcCCCCCcceehh
Q psy4398 267 ILYAHCKYKRFEVPKYETVQ 286 (306)
Q Consensus 267 ~l~~~~~~~g~~~~~~~~~~ 286 (306)
..+.+.++. ..|..|++
T Consensus 323 ~~~g~~~~~---~~c~~c~~ 339 (671)
T 1ps9_A 323 AQSGRADEI---NTCIGCNQ 339 (671)
T ss_dssp HHTTCGGGC---CCCCCCCT
T ss_pred HHcCCCCCc---cccccccc
Confidence 433333222 45777776
No 21
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=100.00 E-value=1e-35 Score=274.21 Aligned_cols=253 Identities=10% Similarity=0.011 Sum_probs=201.0
Q ss_pred ccccccccccCCceEEccCCCCCCHHHHHHHHHcCCCEEEecceechhhhhh-----hhhhhcccccccccCCCCCcee-
Q psy4398 20 ANANQANINYSNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKT-----ERKVNDLLNTIDFVDPLDGSVV- 93 (306)
Q Consensus 20 ~~~~~~~l~l~n~i~lAPm~~~t~~~~r~~~~~~G~g~~~te~~~~~~~~~~-----~~~~~~~l~~~~~~~~~~~~~~- 93 (306)
+|++++|++|+|||++|||.-..+..++..+.++|+|+++|+++++++.... .+...+++|.+++.|++.....
T Consensus 4 l~~~i~g~~l~nPi~~Aag~~~~~~~~~~~~~~~G~g~v~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~~g~~~~~~ 83 (314)
T 2e6f_A 4 LKLNLLDHVFANPFMNAAGVLCSTEEDLRCMTASSSGALVSKSCTSAPRDGNPEPRYMAFPLGSINSMGLPNLGFDFYLK 83 (314)
T ss_dssp CCEEETTEEESSSEEECTTSSCSSHHHHHHHHHSSCSCEECCCBCSSCBCCSCSCCEEEETTEEEECCCCCBSCHHHHHH
T ss_pred cceEECCEecCCCcEECCCCCCCCHHHHHHHHHCCCCEEEeCccCCcccCCCCCCcEEecccceeecCCCCCcCHHHHHH
Confidence 6899999999999999998832356666667789999999999998764311 1112356777778777542211
Q ss_pred -eecCCC-CCCceEEEecCCCHHHHHHHHHHHhc-CCC---EEEEccCCCccccccCCccccccCChHHHHHHHHHHHhc
Q psy4398 94 -FRTCPR-EKNKIILQIGTADPERALEAAKKVEH-DVA---AIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISN 167 (306)
Q Consensus 94 -~~~~~~-~~~p~ivql~g~~~~~~~~aa~~~~~-g~d---~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~ 167 (306)
...... .+.|+++||.+.++++|.++++++++ |+| +||||++||+. .. +..+..+++.+.++++++++.
T Consensus 84 ~~~~~~~~~~~p~~~~i~g~~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~-~g----~~~~g~~~~~~~~ii~~vr~~ 158 (314)
T 2e6f_A 84 YASDLHDYSKKPLFLSISGLSVEENVAMVRRLAPVAQEKGVLLELNLSCPNV-PG----KPQVAYDFEAMRTYLQQVSLA 158 (314)
T ss_dssp HHHHTCCTTTCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECCCCCS-TT----CCCGGGSHHHHHHHHHHHHHH
T ss_pred HHHHHhhcCCCcEEEEeCCCCHHHHHHHHHHHHHhCCCcCceEEEEcCCCCC-CC----chhhcCCHHHHHHHHHHHHHh
Confidence 111112 36799999999999999999999875 899 99999999996 22 344556888999999999999
Q ss_pred ccccEEEEeccCCChHHHHHHHHHHHHcC-CcEEEEcccCC-----C--------------CCCCC----CCcHHHHHHH
Q psy4398 168 LSIPVSCKIRVFHNEADTIALCKRLEACG-IIAIGVHGRTK-----A--------------ERPRH----RNRIEMIRTL 223 (306)
Q Consensus 168 ~~~pv~vKir~g~~~~~~~~~a~~l~~~G-~d~i~v~~~~~-----~--------------~~~~~----p~~~~~v~~i 223 (306)
+++||++|++.+++.++..++++.++++| +|+|++++++. + +.+++ |..+++++++
T Consensus 159 ~~~Pv~vK~~~~~~~~~~~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v 238 (314)
T 2e6f_A 159 YGLPFGVKMPPYFDIAHFDTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAF 238 (314)
T ss_dssp HCSCEEEEECCCCCHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCCHHHHHHHHHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHH
Confidence 89999999998877788999999999999 99999988651 1 11122 2347999999
Q ss_pred HhhC-CCcEEEecCCCCHHHHHHHHHhh---hhhccccCC-CCCchHH---HHHHHHHhcCC
Q psy4398 224 TQHL-KIPVIANGGSKEIVDYGGVFSLN---CAFLRNHYP-VEKLPKT---ILYAHCKYKRF 277 (306)
Q Consensus 224 ~~~~-~ipvia~GGI~s~~~~~~~l~~~---v~vGrall~-~p~~~~~---~l~~~~~~~g~ 277 (306)
++.+ ++|||++|||+|.+++.+++..| |++||+++. ||.+.+. ++++||.++|+
T Consensus 239 ~~~~~~ipvi~~GGI~~~~da~~~l~~GAd~V~ig~~~l~~~p~~~~~i~~~l~~~~~~~g~ 300 (314)
T 2e6f_A 239 YRRCPDKLVFGCGGVYSGEDAFLHILAGASMVQVGTALQEEGPGIFTRLEDELLEIMARKGY 300 (314)
T ss_dssp HHHCTTSEEEEESSCCSHHHHHHHHHHTCSSEEECHHHHHHCTTHHHHHHHHHHHHHHHHTC
T ss_pred HHhcCCCCEEEECCCCCHHHHHHHHHcCCCEEEEchhhHhcCcHHHHHHHHHHHHHHHHcCC
Confidence 9999 99999999999999999999875 599999996 9966553 99999999993
No 22
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=100.00 E-value=9.1e-36 Score=278.38 Aligned_cols=235 Identities=16% Similarity=0.150 Sum_probs=189.3
Q ss_pred ccccccccccCCceEEccCCCC--------CCHHHHHHHHHcCCCEEEecceechhhhhhhhhhhcccccccccCCCCCc
Q psy4398 20 ANANQANINYSNKIILAPMVRM--------NTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDGS 91 (306)
Q Consensus 20 ~~~~~~~l~l~n~i~lAPm~~~--------t~~~~r~~~~~~G~g~~~te~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 91 (306)
.|+++++++|+|||++|||+.. |+.....+.+++.+|+++||.+.+.+.........++++ ...+.. ++
T Consensus 6 ~P~~ig~~~lkNRiv~aPm~~~~a~~~g~pt~~~~~yY~~rA~~GLIite~~~V~~~g~~~~~~~gi~~-d~~i~~--~k 82 (362)
T 4ab4_A 6 DPIKLGDLQLPNRIIMAPLTRCRADEGRVPNALMAEYYVQRASAGLILSEATSVSPMGVGYPDTPGIWN-DEQVRG--WN 82 (362)
T ss_dssp SCEEETTEEESCSEEECCCCCCCCBTTTBCCHHHHHHHHHTTTSSEEEEEEEESSGGGCCSTTCCBCSS-HHHHHH--HH
T ss_pred CCeeECCEEeeCccEECCccCCccCCCCCCCHHHHHHHHHHHhhCEEeeeeeEecccccCCCCCCCcCC-HHHHHH--HH
Confidence 6779999999999999999853 334455555566689999999987765433333223332 222322 66
Q ss_pred eeeecCCCCCCceEEEecCCC------------------------------------------------HHHHHHHHHHH
Q psy4398 92 VVFRTCPREKNKIILQIGTAD------------------------------------------------PERALEAAKKV 123 (306)
Q Consensus 92 ~~~~~~~~~~~p~ivql~g~~------------------------------------------------~~~~~~aa~~~ 123 (306)
.+.+.+|+.|.++++||++.+ .++|+++|+++
T Consensus 83 ~l~~avH~~G~~i~~QL~H~Gr~~~~~~~~g~~~vapS~i~~~~~~~~~~~~~~~~~pr~mt~~eI~~ii~~f~~AA~~a 162 (362)
T 4ab4_A 83 NVTKAVHAAGGRIFLQLWHVGRISHPSYLNGELPVAPSAIQPKGHVSLVRPLSDYPTPRALETEEINDIVEAYRSGAENA 162 (362)
T ss_dssp HHHHHHHHTTCCEEEEEECCTTSCCGGGTTTCCCEESSCCCCSSBCSSCSSCCBCCCCEECCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCEEEEEeccCcccccccccCCCcccCCCCCCCCccccccccccCCCCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 777888888999999996410 25799999998
Q ss_pred hc-CCCEEEEccCC---------CccccccCCccccccCChHHHHHHHHHHHhcccc-cEEEEeccCC---------ChH
Q psy4398 124 EH-DVAAIDINMGC---------PKQFSLTGGMGAALLSTPDIACNILTTLISNLSI-PVSCKIRVFH---------NEA 183 (306)
Q Consensus 124 ~~-g~d~veln~gc---------P~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~-pv~vKir~g~---------~~~ 183 (306)
++ |||+||||++| |..|.|+|+||+++++|++++.|++++||++++. ||.||++... ..+
T Consensus 163 ~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr~~vg~~~v~vRls~~~~~~g~~~~~~~~ 242 (362)
T 4ab4_A 163 KAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAIEVWGAQRVGVHLAPRADAHDMGDADRAE 242 (362)
T ss_dssp HHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCSSSCCCTTHHH
T ss_pred HHcCCCEEEECCcCccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHhcCCCceEEEeeccccccccCCCCcHH
Confidence 75 99999999998 9999999999999999999999999999999853 9999999631 135
Q ss_pred HHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhh----hhhccccCC
Q psy4398 184 DTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLN----CAFLRNHYP 259 (306)
Q Consensus 184 ~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~----v~vGrall~ 259 (306)
+..++++.|+++|+|+|++++++. ++ ++++++++.+++|||++||+ |+++++++++.+ |++||++++
T Consensus 243 ~~~~la~~l~~~Gvd~i~v~~~~~-----~~---~~~~~ik~~~~iPvi~~Ggi-t~e~a~~~l~~g~aD~V~iGR~~la 313 (362)
T 4ab4_A 243 TFTYVARELGKRGIAFICSREREA-----DD---SIGPLIKEAFGGPYIVNERF-DKASANAALASGKADAVAFGVPFIA 313 (362)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCCC-----TT---CCHHHHHHHHCSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred HHHHHHHHHHHhCCCEEEECCCCC-----CH---HHHHHHHHHCCCCEEEeCCC-CHHHHHHHHHcCCccEEEECHHhHh
Confidence 689999999999999999998751 22 36789999999999999999 999999999874 699999999
Q ss_pred CCCchHH
Q psy4398 260 VEKLPKT 266 (306)
Q Consensus 260 ~p~~~~~ 266 (306)
||+|+++
T Consensus 314 nPdl~~k 320 (362)
T 4ab4_A 314 NPDLPAR 320 (362)
T ss_dssp CTTHHHH
T ss_pred CcHHHHH
Confidence 9988875
No 23
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=100.00 E-value=8e-36 Score=303.29 Aligned_cols=259 Identities=11% Similarity=0.023 Sum_probs=200.3
Q ss_pred ccccccccccCCceEEccCCCCCC--HH------HHHHHHHcCCCEEEecceechhhhhhhhhh-hcccccccccCCCCC
Q psy4398 20 ANANQANINYSNKIILAPMVRMNT--LP------FRLLALDYGADLVYSEELVDHKLVKTERKV-NDLLNTIDFVDPLDG 90 (306)
Q Consensus 20 ~~~~~~~l~l~n~i~lAPm~~~t~--~~------~r~~~~~~G~g~~~te~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~ 90 (306)
.|+++++++|+|||++|||+.... .+ |+..+ ++|+|+++||++++.+........ .+++ +...+.. +
T Consensus 11 ~p~~ig~~~l~NRiv~apm~~~~~~~~~~~~~~~y~~ra-~gG~Gliite~~~v~~~~~~~~~~~~~~~-~~~~~~~--~ 86 (729)
T 1o94_A 11 EPIQIGPKTLRNRFYQVPHCIGAGSDKPGFQSAHRSVKA-EGGWAALNTEYCSINPESDDTHRLSARIW-DEGDVRN--L 86 (729)
T ss_dssp SCEEETTEEESSSEEECCCCCSCTTTCHHHHHHHHHHHH-HTTCSEEEEEEEESSTTSCCTTSCCEECS-SHHHHHH--H
T ss_pred CCeeECCEEECCccEECCCcCCcCCCCcHHHHHHHHHHh-cCCCCEEEEcceEecCcccCCCCCCCccC-ChHHhHH--H
Confidence 678999999999999999986432 11 33333 679999999999886543222111 1222 2222211 4
Q ss_pred ceeeecCCCCCCceEEEecCC------------------------C---------------HHHHHHHHHHHhc-CCCEE
Q psy4398 91 SVVFRTCPREKNKIILQIGTA------------------------D---------------PERALEAAKKVEH-DVAAI 130 (306)
Q Consensus 91 ~~~~~~~~~~~~p~ivql~g~------------------------~---------------~~~~~~aa~~~~~-g~d~v 130 (306)
+.+.+.+|+.+.++++||+|. . .++|+++|+++++ |||+|
T Consensus 87 ~~~~~~vh~~g~~i~~Ql~h~Gr~~~~~~~~~~~~~ps~~~~~~~~~~~p~~~t~~eI~~~i~~f~~aA~~a~~aGfDgV 166 (729)
T 1o94_A 87 KAMTDEVHKYGALAGVELWYGGAHAPNMESRATPRGPSQYASEFETLSYCKEMDLSDIAQVQQFYVDAAKRSRDAGFDIV 166 (729)
T ss_dssp HHHHHHHHTTTCEEEEEEECCGGGSCCTTTCCCCEESSCCBCSSSTTCBCEECCHHHHHHHHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHhCCCeEEEEecCCCccccccccCCCCcCCCcccccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCCEE
Confidence 556677788899999999882 0 3789999999974 99999
Q ss_pred EEccCC---------CccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEecc-------CCC-hHHHHHHHHH
Q psy4398 131 DINMGC---------PKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIRV-------FHN-EADTIALCKR 191 (306)
Q Consensus 131 eln~gc---------P~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~-------g~~-~~~~~~~a~~ 191 (306)
|||++| |..|.|+|+||+++++|++++.|++++||+++ ++||.+|++. |++ .++..++++.
T Consensus 167 Eih~a~gyLl~qFlsp~~N~R~D~yGGs~enR~r~~~eiv~avr~~vg~~~pv~vrls~~~~~~~~G~~~~~~~~~~~~~ 246 (729)
T 1o94_A 167 YVYGAHSYLPLQFLNPYYNKRTDKYGGSLENRARFWLETLEKVKHAVGSDCAIATRFGVDTVYGPGQIEAEVDGQKFVEM 246 (729)
T ss_dssp EEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTTSEEEEEEEEECSSCTTSCCTTTHHHHHHHH
T ss_pred EEccccchHHHHhcCCccCCCcCcCCCCHHHHhHHHHHHHHHHHHHhCCCceEEEEEccccCcCCCCCCchHHHHHHHHH
Confidence 999998 99999999999999999999999999999999 7899999985 455 5789999999
Q ss_pred HHHcCCcEEEEcccCC--------CCCCCCC-CcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHh----hhhhccccC
Q psy4398 192 LEACGIIAIGVHGRTK--------AERPRHR-NRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSL----NCAFLRNHY 258 (306)
Q Consensus 192 l~~~G~d~i~v~~~~~--------~~~~~~p-~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~----~v~vGrall 258 (306)
+++ |+|+++++.+.. ...+.++ .++++++++++.+++|||++|||+|+++++++++. ++++||+++
T Consensus 247 l~~-~~d~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pvi~~G~i~~~~~a~~~l~~g~aD~V~~gR~~l 325 (729)
T 1o94_A 247 ADS-LVDMWDITIGDIAEWGEDAGPSRFYQQGHTIPWVKLVKQVSKKPVLGVGRYTDPEKMIEIVTKGYADIIGCARPSI 325 (729)
T ss_dssp HGG-GCSEEEEEECCSTTGGGTSCCTTTCCTTTTHHHHHHHHTTCSSCEECCSCCCCHHHHHHHHHTTSCSBEEESHHHH
T ss_pred HHh-hcCEEEEeeecccccccccCCccccCccccHHHHHHHHHHCCCEEEEeCCCCCHHHHHHHHHCCCCCEEEeCchhh
Confidence 997 799999987641 1112222 26889999999999999999999999999999987 459999999
Q ss_pred CCCCchHHHHHHHHHhcCCCCCcceehh
Q psy4398 259 PVEKLPKTILYAHCKYKRFEVPKYETVQ 286 (306)
Q Consensus 259 ~~p~~~~~~l~~~~~~~g~~~~~~~~~~ 286 (306)
+||+|+++..+...+. -.+|..|++
T Consensus 326 ~~P~~~~~~~~g~~~~---~~~ci~Cn~ 350 (729)
T 1o94_A 326 ADPFLPQKVEQGRYDD---IRVCIGCNV 350 (729)
T ss_dssp HCTTHHHHHHTTCGGG---CCCCCCCCH
T ss_pred cCchHHHHHHcCCccc---cccccccch
Confidence 9999887633222221 257888876
No 24
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=100.00 E-value=1.6e-35 Score=276.55 Aligned_cols=236 Identities=15% Similarity=0.130 Sum_probs=189.3
Q ss_pred ccccccccccCCceEEccCCCC--------CCHHHHHHHHHcCCCEEEecceechhhhhhhhhhhcccccccccCCCCCc
Q psy4398 20 ANANQANINYSNKIILAPMVRM--------NTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDGS 91 (306)
Q Consensus 20 ~~~~~~~l~l~n~i~lAPm~~~--------t~~~~r~~~~~~G~g~~~te~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 91 (306)
.|++|++++|+|||++|||+.. |+.....+.+++.+|+++||.+.+.+.........++++ ...+.. ++
T Consensus 14 ~P~~ig~~~lkNRiv~aPm~~~~a~~~g~pt~~~~~yY~~rA~~GLIite~~~V~~~g~~~~~~~gi~~-d~~i~~--~k 90 (361)
T 3gka_A 14 DPLTIGDLTLANRIIMAPLTRARAGDTRTPNALMARYYAERASAGLIISEATSVTPQGVGYASTPGIWS-PEQVDG--WR 90 (361)
T ss_dssp SCEEETTEEESCSEEECCCCCCCSTTTTCCCHHHHHHHHTTTTSSEEEEEEEESSGGGCCSTTCCBSSS-HHHHHH--HH
T ss_pred CCeeECCEEecCccEECCCCCCccCCCCCCCHHHHHHHHHHHhCCEEEEcceeecccccCCCCCCccCC-HHHHHH--HH
Confidence 6779999999999999999853 334455555555589999999988765433332223322 223322 66
Q ss_pred eeeecCCCCCCceEEEecCCC------------------------------------------------HHHHHHHHHHH
Q psy4398 92 VVFRTCPREKNKIILQIGTAD------------------------------------------------PERALEAAKKV 123 (306)
Q Consensus 92 ~~~~~~~~~~~p~ivql~g~~------------------------------------------------~~~~~~aa~~~ 123 (306)
.+.+.+|+.|.++++||++.+ .++|+++|+++
T Consensus 91 ~l~~avH~~G~~i~~QL~H~Gr~~~~~~~~g~~~vapS~i~~~~~~~~~~g~~~~~~pr~mt~~eI~~ii~~f~~AA~~A 170 (361)
T 3gka_A 91 LVTDAVHAAGGRIFLQLWHVGRVSDPVFLDGALPVAPSAIAPGGHVSLVRPQRPYVTPRALELDEIPGVVAAFRRGAENA 170 (361)
T ss_dssp HHHHHHHHTTCCEEEEEECCTTSCCGGGTTTCCCEESSSCCCSSBCSSCSSCCBCCCCEECCGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCeEEEeeccCCccccccccCCCCcccCCCCCCCCcccccccccCCCCCccCCHHHHHHHHHHHHHHHHHH
Confidence 778888888999999996410 25799999998
Q ss_pred hc-CCCEEEEccCC---------CccccccCCccccccCChHHHHHHHHHHHhcccc-cEEEEeccC-----C----ChH
Q psy4398 124 EH-DVAAIDINMGC---------PKQFSLTGGMGAALLSTPDIACNILTTLISNLSI-PVSCKIRVF-----H----NEA 183 (306)
Q Consensus 124 ~~-g~d~veln~gc---------P~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~-pv~vKir~g-----~----~~~ 183 (306)
++ |||+||||++| |..|.|+|+||+++++|++++.|++++||++++. ||.||++.. . ..+
T Consensus 171 ~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~vg~~~v~vRls~~~~~~g~~~~~~~~ 250 (361)
T 3gka_A 171 RAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVWSAARVGVHLAPRGDAHTMGDSDPAA 250 (361)
T ss_dssp HHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHHCGGGEEEEECTTCCSSSCCCSCHHH
T ss_pred HHcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHcCCCeEEEecccccccCCCCCCCcHH
Confidence 75 99999999998 9999999999999999999999999999999853 999999962 1 135
Q ss_pred HHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhh----hhhccccCC
Q psy4398 184 DTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLN----CAFLRNHYP 259 (306)
Q Consensus 184 ~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~----v~vGrall~ 259 (306)
+..++++.|+++|+|+|+++++.. ++ ++++++++.+++|||++||| |+++++++++.+ |++||++++
T Consensus 251 ~~~~la~~l~~~Gvd~i~v~~~~~-----~~---~~~~~ik~~~~iPvi~~Ggi-t~e~a~~~l~~G~aD~V~iGR~~la 321 (361)
T 3gka_A 251 TFGHVARELGRRRIAFLFARESFG-----GD---AIGQQLKAAFGGPFIVNENF-TLDSAQAALDAGQADAVAWGKLFIA 321 (361)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCCS-----TT---CCHHHHHHHHCSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEECCCCC-----CH---HHHHHHHHHcCCCEEEeCCC-CHHHHHHHHHcCCccEEEECHHhHh
Confidence 689999999999999999998751 22 46789999999999999999 999999999874 699999999
Q ss_pred CCCchHHH
Q psy4398 260 VEKLPKTI 267 (306)
Q Consensus 260 ~p~~~~~~ 267 (306)
||+|+++.
T Consensus 322 dPdl~~k~ 329 (361)
T 3gka_A 322 NPDLPRRF 329 (361)
T ss_dssp CTTHHHHH
T ss_pred CcHHHHHH
Confidence 99888663
No 25
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=100.00 E-value=1.6e-35 Score=299.52 Aligned_cols=265 Identities=11% Similarity=0.025 Sum_probs=203.9
Q ss_pred ccccccccccCCceEEccCCCCCCH-------HHHHHHHHcCCCEEEecceechhhhhhhhhhh-cccccccccCCCCCc
Q psy4398 20 ANANQANINYSNKIILAPMVRMNTL-------PFRLLALDYGADLVYSEELVDHKLVKTERKVN-DLLNTIDFVDPLDGS 91 (306)
Q Consensus 20 ~~~~~~~l~l~n~i~lAPm~~~t~~-------~~r~~~~~~G~g~~~te~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~ 91 (306)
.|+++++++|+|||++|||+..++. .|+...+++|+|+++||++.+.+......... +++ +..++.. ++
T Consensus 16 ~p~~ig~~~l~NRiv~apm~~~~~~~~~~~~~~~~~~~a~gG~gliite~~~v~~~~~~~~~~~~~~~-~~~~~~~--~~ 92 (690)
T 3k30_A 16 EPVQIGPFTTKNRFYQVPHCNGMGYRDPSAQASMRKIKAEGGWSAVCTEQVEIHATSDIAPFIELRIW-DDQDLPA--LK 92 (690)
T ss_dssp CCCEETTEECSSSEEECCCCCSCSSSCHHHHHHHHHHHHHTTCSEEEEEEEECSGGGCCTTSCCEECS-SGGGHHH--HH
T ss_pred CCeeECCEEECCCeEeCCCcCCCCCCChHHHHHHHHHHhccCCEEEEecceEeccccccCCCcCCccC-CHHHHHH--HH
Confidence 7889999999999999999964331 23333457899999999998876543332221 332 2233322 56
Q ss_pred eeeecCCCCCCceEEEecCCC-----------------------------------------HHHHHHHHHHHhc-CCCE
Q psy4398 92 VVFRTCPREKNKIILQIGTAD-----------------------------------------PERALEAAKKVEH-DVAA 129 (306)
Q Consensus 92 ~~~~~~~~~~~p~ivql~g~~-----------------------------------------~~~~~~aa~~~~~-g~d~ 129 (306)
.+.+.+|+.|.++++||+|.+ .++|++||+++++ |||+
T Consensus 93 ~~~~~vh~~g~~i~~Ql~h~Gr~~~~~~~~~~~~~ps~~~~~~~~~~~~~p~~~t~~ei~~~i~~f~~aA~~a~~aGfDg 172 (690)
T 3k30_A 93 RIADAIHEGGGLAGIELAHNGMNAPNQLSRETPLGPGHLPVAPDTIAPIQARAMTKQDIDDLRRWHRNAVRRSIEAGYDI 172 (690)
T ss_dssp HHHHHHHHTTCEEEEEEECCGGGCCCTTTCCCCEESSSCBSCSSCCCSCBCEECCHHHHHHHHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHhcCCEEEEEccCCcccccccccCCCccCCCCCcccccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCCE
Confidence 677788888999999998521 3789999999975 9999
Q ss_pred EEEccC----------CCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEecc------CCChHHHHHHHHH
Q psy4398 130 IDINMG----------CPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIRV------FHNEADTIALCKR 191 (306)
Q Consensus 130 veln~g----------cP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~------g~~~~~~~~~a~~ 191 (306)
||||++ ||..|.|+|+||+++++|++++.|++++||+++ ++||.+|++. |++.++..++++.
T Consensus 173 Veih~a~gy~L~~qFlsp~~N~R~D~yGGs~enR~r~~~ei~~avr~~~g~~~~v~~r~s~~~~~~~g~~~~~~~~~~~~ 252 (690)
T 3k30_A 173 VYVYGAHGYSGVHHFLSKRYNQRTDEYGGSLENRMRLLRELLEDTLDECAGRAAVACRITVEEEIDGGITREDIEGVLRE 252 (690)
T ss_dssp EEEEECTTCSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTSSEEEEEEECCCCSTTSCCHHHHHHHHHH
T ss_pred EEEcccccchHHHHhCCCccCCCccccCCCHHHHHHHHHHHHHHHHHHhCCCceEEEEECccccCCCCCCHHHHHHHHHH
Confidence 999876 566899999999999999999999999999999 5688999875 4667889999999
Q ss_pred HHHcCCcEEEEcccCC-----CCCC-CCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhh----hhhccccCCCC
Q psy4398 192 LEACGIIAIGVHGRTK-----AERP-RHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLN----CAFLRNHYPVE 261 (306)
Q Consensus 192 l~~~G~d~i~v~~~~~-----~~~~-~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~----v~vGrall~~p 261 (306)
+++ |+|++++|.++. ...+ .....+++++++++.+++|||++|||+|+++++++++.+ +++||+++.||
T Consensus 253 l~~-~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pvi~~G~i~~~~~a~~~l~~g~~d~v~~gR~~~~~P 331 (690)
T 3k30_A 253 LGE-LPDLWDFAMGSWEGDSVTSRFAPEGRQEEFVAGLKKLTTKPVVGVGRFTSPDAMVRQIKAGILDLIGAARPSIADP 331 (690)
T ss_dssp HTT-SSSEEEEECSCHHHHTCCTTTCCTTTTHHHHTTSGGGCSSCEEECSCCCCHHHHHHHHHTTSCSEEEESHHHHHCT
T ss_pred HHh-hcCEEEEecccccccCCCCccCCccccHHHHHHHHHHcCCeEEEeCCCCCHHHHHHHHHCCCcceEEEcHHhHhCc
Confidence 998 899999987541 1112 223457899999999999999999999999999999874 69999999999
Q ss_pred CchHHHHHHHHHhcCCCCCcceehh-hccce
Q psy4398 262 KLPKTILYAHCKYKRFEVPKYETVQ-YEKLF 291 (306)
Q Consensus 262 ~~~~~~l~~~~~~~g~~~~~~~~~~-~~~~~ 291 (306)
+++++..+...++ -..|+.|++ +++.|
T Consensus 332 ~~~~~~~~g~~~~---i~~c~~c~~C~~~~~ 359 (690)
T 3k30_A 332 FLPNKIRDGRLNL---IRECIGCNICVSGDL 359 (690)
T ss_dssp THHHHHHTTCGGG---CCCCCCCCHHHHHHH
T ss_pred cHHHHHHcCCccc---cccccchhhhhhccc
Confidence 9887633222222 157777776 44333
No 26
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=100.00 E-value=2.5e-34 Score=264.23 Aligned_cols=251 Identities=17% Similarity=0.227 Sum_probs=192.8
Q ss_pred ccccccccccCCceEEcc-CCCCCCHHHHHHHHHcCCCEEEecceechhhhhhh-----hhhhcccccccccCCCCCce-
Q psy4398 20 ANANQANINYSNKIILAP-MVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTE-----RKVNDLLNTIDFVDPLDGSV- 92 (306)
Q Consensus 20 ~~~~~~~l~l~n~i~lAP-m~~~t~~~~r~~~~~~G~g~~~te~~~~~~~~~~~-----~~~~~~l~~~~~~~~~~~~~- 92 (306)
+|++++|++|+|||++|| |.+.+. .++......|+|+++|+.++..++.... +...++++..++.+++....
T Consensus 7 l~~~~~g~~l~npi~~aag~~~~~~-~~~~~~~~~g~G~~~~~si~~~p~~g~~~p~l~~~~~g~~~~~g~~~~~~~~~~ 85 (311)
T 1ep3_A 7 LSVKLPGLDLKNPIIPASGCFGFGE-EYAKYYDLNKLGSIMVKATTLHPRFGNPTPRVAETASGMLNAIGLQNPGLEVIM 85 (311)
T ss_dssp TCEEETTEEESSSEEECTTSSTTST-TGGGTSCGGGSSCEEEEEECSSCBCCCCSCCEEEETTEEEECCCCCBCCHHHHH
T ss_pred cceEECCEECCCCcEECCCCCCCCH-HHHHHHHhcCCCEEEeCeeccCccCCCCCCeEEECCcccccccCCCCcCHHHHH
Confidence 789999999999999999 665554 4554444678999999988766543211 11234566666666542221
Q ss_pred --eeecCCC-C-CCceEEEecCCCHHHHHHHHHHHh--cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHh
Q psy4398 93 --VFRTCPR-E-KNKIILQIGTADPERALEAAKKVE--HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLIS 166 (306)
Q Consensus 93 --~~~~~~~-~-~~p~ivql~g~~~~~~~~aa~~~~--~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~ 166 (306)
..+.+++ . +.|+++||++.++++|.+++++++ .|+|+||||++||+.+.+ |..+..+++++.++++++++
T Consensus 86 ~~~~~~~~~~~~~~p~~v~l~~~~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g----~~~~g~~~~~~~eii~~v~~ 161 (311)
T 1ep3_A 86 TEKLPWLNENFPELPIIANVAGSEEADYVAVCAKIGDAANVKAIELNISCPNVKHG----GQAFGTDPEVAAALVKACKA 161 (311)
T ss_dssp HTHHHHHHHHCTTSCEEEEECCSSHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGT----TEEGGGCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCcEEEEEcCCCHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCc----hhhhcCCHHHHHHHHHHHHH
Confidence 1112222 2 679999999999999999999997 699999999999996543 34455789999999999999
Q ss_pred cccccEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcc---------cCCC-------CCCCCCCc----HHHHHHHHhh
Q psy4398 167 NLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHG---------RTKA-------ERPRHRNR----IEMIRTLTQH 226 (306)
Q Consensus 167 ~~~~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~---------~~~~-------~~~~~p~~----~~~v~~i~~~ 226 (306)
.+++||.+|++. +..+..++++.++++|+|+|++++ ++.. +.+.++.. +++++++++.
T Consensus 162 ~~~~pv~vk~~~--~~~~~~~~a~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~~~ 239 (311)
T 1ep3_A 162 VSKVPLYVKLSP--NVTDIVPIAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQD 239 (311)
T ss_dssp HCSSCEEEEECS--CSSCSHHHHHHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHHTT
T ss_pred hcCCCEEEEECC--ChHHHHHHHHHHHHcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHHHHHHHHHHHh
Confidence 999999999994 445678899999999999999954 2221 12334332 5889999999
Q ss_pred CCCcEEEecCCCCHHHHHHHHHhh---hhhccccCCCCCchHH---HHHHHHHhcCC
Q psy4398 227 LKIPVIANGGSKEIVDYGGVFSLN---CAFLRNHYPVEKLPKT---ILYAHCKYKRF 277 (306)
Q Consensus 227 ~~ipvia~GGI~s~~~~~~~l~~~---v~vGrall~~p~~~~~---~l~~~~~~~g~ 277 (306)
+++|||++|||.|.+++.++++.| +++||+++.+|.+.+. +++.||.++|+
T Consensus 240 ~~ipvia~GGI~~~~d~~~~l~~GAd~V~vg~~~l~~p~~~~~i~~~l~~~~~~~g~ 296 (311)
T 1ep3_A 240 VDIPIIGMGGVANAQDVLEMYMAGASAVAVGTANFADPFVCPKIIDKLPELMDQYRI 296 (311)
T ss_dssp CSSCEEECSSCCSHHHHHHHHHHTCSEEEECTHHHHCTTHHHHHHHHHHHHHHHTTC
T ss_pred cCCCEEEECCcCCHHHHHHHHHcCCCEEEECHHHHcCcHHHHHHHHHHHHHHHHcCC
Confidence 999999999999999999999875 5999999999966543 99999999993
No 27
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=100.00 E-value=1.5e-33 Score=263.83 Aligned_cols=244 Identities=13% Similarity=0.089 Sum_probs=189.4
Q ss_pred ccccccccccCCceEEccCCC--------CCCHHHHHHHHHcCCCEEEecceechhhhhhhhhhhcccccccccCCCCCc
Q psy4398 20 ANANQANINYSNKIILAPMVR--------MNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDGS 91 (306)
Q Consensus 20 ~~~~~~~l~l~n~i~lAPm~~--------~t~~~~r~~~~~~G~g~~~te~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 91 (306)
.|++|++++|||||++|||+. +|+.....+.+++++|+++||.+.+.+.........+++ +..++.. ++
T Consensus 6 ~P~~ig~~~lkNRiv~apm~~~~a~~dg~~t~~~~~~y~~rA~gGliite~~~V~~~g~~~~~~~gi~-~d~~i~~--~k 82 (358)
T 4a3u_A 6 DPIRFGAFTAKNRIWMAPLTRGRATRDHVPTEIMAEYYAQRASAGLIISEATGISQEGLGWPYAPGIW-SDAQVEA--WL 82 (358)
T ss_dssp SCEEETTEEESCSEEECCCCCCCSCTTCCCCHHHHHHHHHTTTSSSEEEEEEESSTTTCCSTTCCBCS-SHHHHHH--HH
T ss_pred CCceECCEEECCceEEcccCCCccCCCCCCCHHHHHHHHHHcCCCEEEEeeeEECccccCCCCCcccC-chHhHHH--HH
Confidence 677999999999999999984 344555666667788999999988766443333222332 2233322 56
Q ss_pred eeeecCCCCCCceEEEecCCC-----------------------------------------------HHHHHHHHHHHh
Q psy4398 92 VVFRTCPREKNKIILQIGTAD-----------------------------------------------PERALEAAKKVE 124 (306)
Q Consensus 92 ~~~~~~~~~~~p~ivql~g~~-----------------------------------------------~~~~~~aa~~~~ 124 (306)
.+.+.+|++|.++++||++.+ .++|++||++++
T Consensus 83 ~l~~avh~~G~~i~~QL~H~Gr~~~~~~~g~~~~apS~~~~~~~~~~~~~~~~~~~pr~mt~~eI~~ii~~F~~AA~rA~ 162 (358)
T 4a3u_A 83 PITQAVHDAGGLIFAQLWHMGRMVPSNVSGMQPVAPSASQAPGLGHTYDGKKPYDVARALRLDEIPRLLDDYEKAARHAL 162 (358)
T ss_dssp HHHHHHHHTTCCEEEEEECCGGGCCHHHHSSCCEESSCEECSSEEECSSSEEECCEEEECCGGGHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCceeeccccccccccccccccCCCCCcccccCCcccccCCCCCCccCccCCHHHHHHHHHHHHHHHHHHH
Confidence 778888889999999996531 257999999997
Q ss_pred c-CCCEEEEccC---------CCccccccCCccccccCChHHHHHHHHHHHhccc-ccEEEEeccC------C---ChHH
Q psy4398 125 H-DVAAIDINMG---------CPKQFSLTGGMGAALLSTPDIACNILTTLISNLS-IPVSCKIRVF------H---NEAD 184 (306)
Q Consensus 125 ~-g~d~veln~g---------cP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~-~pv~vKir~g------~---~~~~ 184 (306)
+ |||+||||.+ ||..|.|+|+||++++||.+++.||+++||++++ .++.||++.. . +.+.
T Consensus 163 ~AGFDgVEIH~ahGYLl~QFLSp~tN~RtDeYGGS~eNR~Rf~~Eii~avr~~vg~~~v~vRls~~~~~~g~~~~~~~~~ 242 (358)
T 4a3u_A 163 KAGFDGVQIHAANGYLIDEFIRDSTNHRHDEYGGAVENRIRLLKDVTERVIATIGKERTAVRLSPNGEIQGTVDSHPEQV 242 (358)
T ss_dssp HTTCSEEEEEECTTSHHHHHHSTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECCSSCBTTBCCSSTHHH
T ss_pred HcCCCeEeecccCCCcHHhceecccCCeeCCCCCCHHHHHHHHHHHHHHHHHHcCccceEEEeccCcccCCCcccchHHH
Confidence 5 9999999986 7999999999999999999999999999999984 4588998862 1 2344
Q ss_pred HHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhh----hhhccccCCC
Q psy4398 185 TIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLN----CAFLRNHYPV 260 (306)
Q Consensus 185 ~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~----v~vGrall~~ 260 (306)
...+++.+++.|++.++++.......+.......+..++++.+..||+ +||+.|++.++++++.+ |.+||++++|
T Consensus 243 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~ik~~~~~~v~-~~g~~~~~~ae~~l~~G~aD~V~~gR~~lad 321 (358)
T 4a3u_A 243 FIPAAKMLSDLDIAFLGMREGAVDGTFGKTDQPKLSPEIRKVFKPPLV-LNQDYTFETAQAALDSGVADAISFGRPFIGN 321 (358)
T ss_dssp HHHHHHHHHHHTCSEEEEECCBTTCSSSBCSSCCCHHHHHHHCCSCEE-EESSCCHHHHHHHHHHTSCSEEEESHHHHHC
T ss_pred HHHHHHhhhccCccccccccccccCcccccccHHHHHHHHHhcCCcEE-EeCCCCHHHHHHHHHcCCceEeHhhHHHHhC
Confidence 678899999999999999866544333222233567888888887776 56778999999999874 5999999999
Q ss_pred CCchHHH
Q psy4398 261 EKLPKTI 267 (306)
Q Consensus 261 p~~~~~~ 267 (306)
|+|+++.
T Consensus 322 Pdlp~k~ 328 (358)
T 4a3u_A 322 PDLPRRF 328 (358)
T ss_dssp TTHHHHH
T ss_pred hhHHHHH
Confidence 9999874
No 28
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=100.00 E-value=2.2e-33 Score=264.19 Aligned_cols=239 Identities=13% Similarity=0.097 Sum_probs=184.0
Q ss_pred ccccccccccCCceEEccCCCC---------C-CHHHHHHHHHcCCCEEEecceechhhhhhhhhhhcccccccccCCCC
Q psy4398 20 ANANQANINYSNKIILAPMVRM---------N-TLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLD 89 (306)
Q Consensus 20 ~~~~~~~l~l~n~i~lAPm~~~---------t-~~~~r~~~~~~G~g~~~te~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 89 (306)
.|+++++++|+|||++|||+.. | +.....+.+++|+|+++||.+.+.+.........+++ +...+..
T Consensus 9 ~P~~ig~~~l~NRiv~apm~~~~a~~~~g~pt~~~~~~yY~~rA~~GLIite~~~v~~~g~~~~~~~gi~-~d~~i~~-- 85 (379)
T 3aty_A 9 RPLKLGRYTLRNRIIMAPLTRCQATEDDHVPRTESMLKYYEDRASAGLIIAEATMVQPNYTGFLTEPGIY-SDAQIEE-- 85 (379)
T ss_dssp SCEEETTEEESCSEEECCCCCCCBCTTTCCBCHHHHHHHHHTTTTSSEEEEEEEESSTTCCSSSSCCBSS-SHHHHHH--
T ss_pred CCeeECCEEEcCccEECCcCCCcccCCCCccCHHHHHHHHHHHhCCCeEEECceecccccccCCCCCCcC-CHHHHHH--
Confidence 6779999999999999999942 2 3344555667799999999988765433222222222 2222221
Q ss_pred CceeeecCCCCCCceEEEecC-----------------------------------------------------------
Q psy4398 90 GSVVFRTCPREKNKIILQIGT----------------------------------------------------------- 110 (306)
Q Consensus 90 ~~~~~~~~~~~~~p~ivql~g----------------------------------------------------------- 110 (306)
++.+.+.+|+.|.++++||++
T Consensus 86 ~k~~~~avh~~G~~i~~QL~H~Gr~~~~~~~~~~~~~g~~~~~~~~~apS~i~~~~~~~~~~~~~~g~~~~~~~pr~lt~ 165 (379)
T 3aty_A 86 WRKIVDAVHKKGGLIFLQLIHAGRAGIPEKILQQSKSDQDPLAGRLLAASAIPIKDHRIPAYFAASGEKETYGVPEELTD 165 (379)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCGGGSCHHHHTTSCCCSSSTTTTCCEESSSCCCCSCCBCTTTSTTSSCBCCCCCEECCH
T ss_pred HHHHHHHHHhcCCEEEEEeccCCcccCcccccccccCCCCCccCcccCCCCCccccccccccccccccccCCCCCccCCH
Confidence 455666666666677777642
Q ss_pred -----CCHHHHHHHHHHHh-c-CCCEEEEccCC---------Cccccc-cCCccc-cccCChHHHHHHHHHHHhccc-cc
Q psy4398 111 -----ADPERALEAAKKVE-H-DVAAIDINMGC---------PKQFSL-TGGMGA-ALLSTPDIACNILTTLISNLS-IP 171 (306)
Q Consensus 111 -----~~~~~~~~aa~~~~-~-g~d~veln~gc---------P~~~~~-~~~~G~-~l~~~~~~~~eiv~~v~~~~~-~p 171 (306)
..+++|+++|+++. + |||+||||++| |+.|.+ +|+||+ ++++|++++.|++++||++++ .|
T Consensus 166 ~eI~~~~i~~f~~AA~~a~~~aGfDgVEih~a~GYLl~QFlsp~~N~R~~D~yGG~slenR~r~~~eiv~aVr~avg~~~ 245 (379)
T 3aty_A 166 DEVRDGIIPLFVEGAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVCDAVGSDR 245 (379)
T ss_dssp HHHHHTHHHHHHHHHHHHHHTSCCSEEEEEECTTSHHHHHHSTTTCCCCSSTTCTTSHHHHHHHHHHHHHHHHHHHCGGG
T ss_pred HHHhHHHHHHHHHHHHHHHHhcCCCEEEEcCcCchHHhhccCCCCCccccCCCCccChhhhHHHHHHHHHHHHHhcCCCe
Confidence 11346788999887 6 99999999985 999999 999999 999999999999999999985 48
Q ss_pred EEEEeccC---------CChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHH
Q psy4398 172 VSCKIRVF---------HNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVD 242 (306)
Q Consensus 172 v~vKir~g---------~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~ 242 (306)
|.+|++.. ++.++..++++.|+++|+|+|+++.++..... .+ .+ ++++++.+++|||++||| |+++
T Consensus 246 v~vRis~~~~~~~~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~~~-~~--~~-~~~ir~~~~iPvi~~G~i-t~~~ 320 (379)
T 3aty_A 246 VGLRISPLNGVHGMIDSNPEALTKHLCKKIEPLSLAYLHYLRGDMVNQQ-IG--DV-VAWVRGSYSGVKISNLRY-DFEE 320 (379)
T ss_dssp EEEEECTTCCGGGCCCSCHHHHHHHHHHHHGGGCCSEEEEECSCTTSCC-CC--CH-HHHHHTTCCSCEEEESSC-CHHH
T ss_pred EEEEECcccccccCCCCCCHHHHHHHHHHHHHhCCCEEEEcCCCcCCCC-cc--HH-HHHHHHHCCCcEEEECCC-CHHH
Confidence 99999972 23467899999999999999999986532211 12 26 899999999999999999 9999
Q ss_pred HHHHHHhh----hhhccccCCCCCchHH
Q psy4398 243 YGGVFSLN----CAFLRNHYPVEKLPKT 266 (306)
Q Consensus 243 ~~~~l~~~----v~vGrall~~p~~~~~ 266 (306)
++++++.+ |++||+++.||+++++
T Consensus 321 a~~~l~~g~aD~V~igR~~l~~P~l~~k 348 (379)
T 3aty_A 321 ADQQIREGKVDAVAFGAKFIANPDLVER 348 (379)
T ss_dssp HHHHHHTTSCSEEEESHHHHHCTTHHHH
T ss_pred HHHHHHcCCCeEEEecHHHHhCcHHHHH
Confidence 99999874 5999999999988865
No 29
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=99.98 E-value=1.9e-32 Score=254.68 Aligned_cols=239 Identities=17% Similarity=0.175 Sum_probs=187.3
Q ss_pred ccccccccccCCceEEccCCCCCCHHHHHHHHHcCCCEEEecceechhhhhh--h-----hhhhcccccccccCCCCCce
Q psy4398 20 ANANQANINYSNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKT--E-----RKVNDLLNTIDFVDPLDGSV 92 (306)
Q Consensus 20 ~~~~~~~l~l~n~i~lAPm~~~t~~~~r~~~~~~G~g~~~te~~~~~~~~~~--~-----~~~~~~l~~~~~~~~~~~~~ 92 (306)
+|++++|++|+|||++|++.... ..++..+.++|+|+++|+++++++.... . ....+++|+.++.|++...
T Consensus 45 l~~~i~g~~l~npi~~aag~~~~-~~~~~~~a~~G~g~i~~~~~~~~~~~g~~~pr~~~~~~d~~~in~~g~~~~g~~~- 122 (336)
T 1f76_A 45 KPVNCMGLTFKNPLGLAAGLDKD-GECIDALGAMGFGSIEIGTVTPRPQPGNDKPRLFRLVDAEGLINRMGFNNLGVDN- 122 (336)
T ss_dssp CCEEETTEEESSSEEECTTSSTT-CCCHHHHHHTTCSEEEEEEECSSCBCCSCSCCEEEETTTTEEEECCCCCBCCHHH-
T ss_pred CCeEECCEEcCCCcEeCcccCCc-HHHHHHHHHcCccEEEeCCCCCCCCCCCCCcceeeccccceeeecCCCCCcCHHH-
Confidence 89999999999999999876322 2255556689999999999987653211 0 1123456777777775422
Q ss_pred eeecCC--CCCCceEEEecCCC-------HHHHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHH
Q psy4398 93 VFRTCP--REKNKIILQIGTAD-------PERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTT 163 (306)
Q Consensus 93 ~~~~~~--~~~~p~ivql~g~~-------~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~ 163 (306)
+.+.++ ..+.|+++||+++. +++|.++++++.+|+|+||||++||+++ |...+++++++.+++++
T Consensus 123 ~~~~~~~~~~~~~~~v~i~~~~~~~i~~~~~~~~~aa~~~~~g~d~iein~~sP~~~------g~~~~~~~~~~~~il~~ 196 (336)
T 1f76_A 123 LVENVKKAHYDGVLGINIGKNKDTPVEQGKDDYLICMEKIYAYAGYIAINISSPNTP------GLRTLQYGEALDDLLTA 196 (336)
T ss_dssp HHHHHHHCCCCSEEEEEECCCTTSCGGGTHHHHHHHHHHHGGGCSEEEEECCCSSST------TGGGGGSHHHHHHHHHH
T ss_pred HHHHHHhcccCCcEEEEecCCCCCcccccHHHHHHHHHHHhccCCEEEEEccCCCCC------CcccccCHHHHHHHHHH
Confidence 222221 13469999999887 8999999999888999999999999964 34456789999999999
Q ss_pred HHhcc---------cccEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcccCCC-------------CCCCCC----CcH
Q psy4398 164 LISNL---------SIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKA-------------ERPRHR----NRI 217 (306)
Q Consensus 164 v~~~~---------~~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~-------------~~~~~p----~~~ 217 (306)
+++.+ ++||+||++.+++.++..++|+.++++|+|+|++++++.. +.++++ ..+
T Consensus 197 vr~~~~~~~~~~g~~~Pv~vKi~~~~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~ 276 (336)
T 1f76_A 197 IKNKQNDLQAMHHKYVPIAVKIAPDLSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKST 276 (336)
T ss_dssp HHHHHHHHHHHHTSCCCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHH
T ss_pred HHHHHHhhhhcccccCceEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHH
Confidence 99988 7999999998878788999999999999999999976421 112232 246
Q ss_pred HHHHHHHhhC--CCcEEEecCCCCHHHHHHHHHhh---hhhccccCC-CCCchHH
Q psy4398 218 EMIRTLTQHL--KIPVIANGGSKEIVDYGGVFSLN---CAFLRNHYP-VEKLPKT 266 (306)
Q Consensus 218 ~~v~~i~~~~--~ipvia~GGI~s~~~~~~~l~~~---v~vGrall~-~p~~~~~ 266 (306)
++++++++.+ ++|||++|||+|.+++.++++.| |++||+++. ||.+.+.
T Consensus 277 ~~i~~i~~~~~~~ipVi~~GGI~~~~da~~~l~~GAd~V~igr~~l~~~P~~~~~ 331 (336)
T 1f76_A 277 EIIRRLSLELNGRLPIIGVGGIDSVIAAREKIAAGASLVQIYSGFIFKGPPLIKE 331 (336)
T ss_dssp HHHHHHHHHHTTSSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHHHCHHHHHH
T ss_pred HHHHHHHHHhCCCCCEEEECCCCCHHHHHHHHHCCCCEEEeeHHHHhcCcHHHHH
Confidence 8889999999 89999999999999999999875 499999987 8966654
No 30
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=99.97 E-value=6.3e-33 Score=261.66 Aligned_cols=244 Identities=13% Similarity=0.089 Sum_probs=186.1
Q ss_pred ccccccccccCCceEEccCCCC--------CCHHHHHHHHH--cCCCEEEecceechhhhhhhhh-hhcccccccccCCC
Q psy4398 20 ANANQANINYSNKIILAPMVRM--------NTLPFRLLALD--YGADLVYSEELVDHKLVKTERK-VNDLLNTIDFVDPL 88 (306)
Q Consensus 20 ~~~~~~~l~l~n~i~lAPm~~~--------t~~~~r~~~~~--~G~g~~~te~~~~~~~~~~~~~-~~~~l~~~~~~~~~ 88 (306)
.|+++++++|+|||++|||+.. |+.....+..+ +|+|+++||.+.+.+....... ..+++ +...+..
T Consensus 16 ~P~~ig~~~LkNRiv~aPm~~~~a~~~g~pt~~~~~yY~~rA~gG~GLIIte~~~V~~~g~~~~~~~~gi~-~d~~i~~- 93 (407)
T 3tjl_A 16 QSIKVGNNTLQTKIVYPPTTRFRALEDHTPSDLQLQYYGDRSTFPGTLLITEATFVSPQASGYEGAAPGIW-TDKHAKA- 93 (407)
T ss_dssp SCEEETTEEESCSEEBCCCCCCBSCTTSCCBHHHHHHHHHTCCSTTCEEEEEEEESSGGGCCCSSBCCBCS-SHHHHHH-
T ss_pred CCeeECCEEecCCcEECCCCCCccCCCCCCCHHHHHHHHHHHcCCceEEEEcceEECCccCCCCCcCcccC-CHHHHHH-
Confidence 7889999999999999999942 33444555444 5799999999987765433332 22332 2222322
Q ss_pred CCceeeecCCCCCCceEEEecCCC-------------------------------------------------HHH-HHH
Q psy4398 89 DGSVVFRTCPREKNKIILQIGTAD-------------------------------------------------PER-ALE 118 (306)
Q Consensus 89 ~~~~~~~~~~~~~~p~ivql~g~~-------------------------------------------------~~~-~~~ 118 (306)
++.+.+.+|+.|.++++||++.+ .++ |++
T Consensus 94 -~k~l~~avH~~G~~i~~QL~H~Gr~~~~~~~~~~g~~~vapS~i~~~~~~~~~~~~~~~~pr~lt~~eI~~ii~~~~~~ 172 (407)
T 3tjl_A 94 -WKVITDKVHANGSFVSTQLIFLGRVADPAVMKTRGLNPVSASATYESDAAKEAAEAVGNPVRALTTQEVKDLVYEAYTN 172 (407)
T ss_dssp -HHHHHHHHHHTTCEEEEEEECCGGGSCHHHHHHTTCCCEESSSCCSSHHHHHHHHHTTCCCEECCHHHHHHHHHTHHHH
T ss_pred -HHHHHHHHHhcCCEEEEEeccCCCccchhhcccCCCcccCCCCcccccccccccccCCCCCCcCCHHHHHHHHHHHHHH
Confidence 66788888888999999997521 145 999
Q ss_pred HHHHHhc-CCCEEEEccCC---------CccccccCCccccccCChHHHHHHHHHHHhccc-ccEEEEeccCC-------
Q psy4398 119 AAKKVEH-DVAAIDINMGC---------PKQFSLTGGMGAALLSTPDIACNILTTLISNLS-IPVSCKIRVFH------- 180 (306)
Q Consensus 119 aa~~~~~-g~d~veln~gc---------P~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~-~pv~vKir~g~------- 180 (306)
||+++++ |||+||||++| |..|.|+|+||+++++|++++.||+++|+++++ .||.+|++...
T Consensus 173 aa~~a~~aGfdgveih~~~GYLl~QFLsp~~N~r~D~YGGs~enr~r~~~ei~~av~~~~~~~~v~~r~~~~~~~~g~~~ 252 (407)
T 3tjl_A 173 AAQKAMDAGFDYIELHAAHGYLLDQFLQPCTNQRTDEYGGSIENRARLILELIDHLSTIVGADKIGIRISPWATFQNMKA 252 (407)
T ss_dssp HHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCGGGCCG
T ss_pred HHHHHHHhCCCeEEECCccchHHHHhcCccccccCCcCCCChhhChHHHHHHHHHHHHHhCCCeEEEEECcccccCCCcc
Confidence 9998875 99999999999 999999999999999999999999999999985 48999999611
Q ss_pred --C----hHHHHHHHHHH---HHcC--CcEEEEc-ccCCCCCCCCC-CcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHH
Q psy4398 181 --N----EADTIALCKRL---EACG--IIAIGVH-GRTKAERPRHR-NRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVF 247 (306)
Q Consensus 181 --~----~~~~~~~a~~l---~~~G--~d~i~v~-~~~~~~~~~~p-~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l 247 (306)
+ .++..++++.| ++.| +|+|+++ ++........+ ..++.+..+++.+++|||++|||.+.+++.+++
T Consensus 253 ~~d~~~~~~~~~~l~~~L~~~~~~G~~l~ylhv~~~~~~~~~~~~~~~~~~~~~~ir~~~~~PvI~~Ggi~~~~dA~~~i 332 (407)
T 3tjl_A 253 HKDTVHPLTTFSYLVHELQQRADKGQGIAYISVVEPRVSGNVDVSEEDQAGDNEFVSKIWKGVILKAGNYSYDAPEFKTL 332 (407)
T ss_dssp GGSSSCHHHHHHHHHHHHHHHHHTTCCCSEEEEECTTEETTEECCGGGCCCCSHHHHHHCCSEEEEESCGGGGTTTTHHH
T ss_pred cccccccHHHHHHHHHHHHhHhhcCCceeEEEEEccccCCCCcCCccchhHHHHHHHHHhCCCEEecCCCCCHHHHHHHH
Confidence 2 34578999999 8889 9999998 44332212121 123456778888899999999999888776666
Q ss_pred Hh-------hhhhccccCCCCCchHH
Q psy4398 248 SL-------NCAFLRNHYPVEKLPKT 266 (306)
Q Consensus 248 ~~-------~v~vGrall~~p~~~~~ 266 (306)
+. +|++||+++.||+++++
T Consensus 333 ~~~~~g~aDlVa~GR~~iaNPdL~~r 358 (407)
T 3tjl_A 333 KEDIADKRTLVGFSRYFTSNPNLVWK 358 (407)
T ss_dssp HHHHTTSSEEEECSHHHHHCTTHHHH
T ss_pred HhhccCCCeEEEeChhhhhCchHHHH
Confidence 54 36999999999988865
No 31
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=99.97 E-value=5.3e-31 Score=246.60 Aligned_cols=255 Identities=13% Similarity=0.037 Sum_probs=186.4
Q ss_pred cc-ccccccccccCCceEEccCCCCCCHHHHHHHHHcCCCEEEecceechhhhh-----hhhhhhcccccccccCCCCCc
Q psy4398 18 DM-ANANQANINYSNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVK-----TERKVNDLLNTIDFVDPLDGS 91 (306)
Q Consensus 18 ~~-~~~~~~~l~l~n~i~lAPm~~~t~~~~r~~~~~~G~g~~~te~~~~~~~~~-----~~~~~~~~l~~~~~~~~~~~~ 91 (306)
++ |++++.|++|+|||++|+++-..+..+.......|+|+++++++++++... -.+.+.+++|.+++.|+|...
T Consensus 34 ~~~L~v~~~Gl~f~NPvglAaG~~~~~~e~~~~l~~~G~G~v~~~tvt~~pq~GNp~PR~~~l~~~~iN~~G~~n~G~~~ 113 (354)
T 3tjx_A 34 SMSLQVNLLNNTFANPFMNAAGVMCTTTEELVAMTESASGSLVSKSCTPALREGNPTPRYQALPLGSINSMGLPNNGFDF 113 (354)
T ss_dssp CCCCCEEETTEEESSSEEECTTSSCSSHHHHHHHHHSSCSCEEEEEECSSCBCCSCSCCEEEETTEEEECCCCCBCCHHH
T ss_pred CCceeEEECCEEcCCCcEEccCCCCCCHHHHHHHHHcCCCEEEeCCcCcccccCCCCCeEEEcccccccccccCCHHHHH
Confidence 44 899999999999999999853344544444447899999999998775431 122346789999999997643
Q ss_pred eeee---cCCCCCCceEEEecCCCHHHHHHHHHHHh----cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHH
Q psy4398 92 VVFR---TCPREKNKIILQIGTADPERALEAAKKVE----HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTL 164 (306)
Q Consensus 92 ~~~~---~~~~~~~p~ivql~g~~~~~~~~aa~~~~----~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v 164 (306)
.+.+ .......|+++||++.+++++.+.++.+. .++|+||||++||+.. .+..+..+++.+.++++++
T Consensus 114 ~~~~~~~~~~~~~~pvivsi~g~~~~~~~~~~~~~~~~~~~~ad~ielNiScPn~~-----g~~~l~~~~~~~~~i~~~v 188 (354)
T 3tjx_A 114 YLAYAAEQHDYGKKPLFLSMSGLSMRENVEMCKRLAAVATEKGVILELNLSCPNVP-----GKPQVAYDFDAMRQCLTAV 188 (354)
T ss_dssp HHHHHHHTCCTTTCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECC--------------CTTSHHHHHHHHHHH
T ss_pred HHHHHHHhhccCCceEEEEEecCChHHHHHHHHHHHHhhhcCCCEEEeeeCCCCCc-----chhhhccCHHHHHHHHHHH
Confidence 3222 22334679999999999999888877653 3799999999999952 2556778999999999999
Q ss_pred HhcccccEEEEeccCCChHHHHHHHHHHHHcC-CcEEEEcc----------cC---------CCCCCCCCCc----HHHH
Q psy4398 165 ISNLSIPVSCKIRVFHNEADTIALCKRLEACG-IIAIGVHG----------RT---------KAERPRHRNR----IEMI 220 (306)
Q Consensus 165 ~~~~~~pv~vKir~g~~~~~~~~~a~~l~~~G-~d~i~v~~----------~~---------~~~~~~~p~~----~~~v 220 (306)
++.+..|+.+|++.+++.......+..+.+.+ ++.++... ++ ..+.+++++. ++++
T Consensus 189 ~~~~~~pv~vK~~p~~~~~~~~~~~~~~~~~~~~~~i~~i~t~~~~~~id~~~~~~~~~~~~~~GGlSG~~~~~~a~~~v 268 (354)
T 3tjx_A 189 SEVYPHSFGVKMPPYFDFAAFDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANI 268 (354)
T ss_dssp HHHCCSCEEEEECCCCSHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHH
T ss_pred HHHhhcccccccCCCCCchhHHHHHHHHHhhcccchhheecccccccccccccccccccCcccccccCchhhHHHHHHHH
Confidence 99999999999997766666666777776654 44444211 11 1123455443 5667
Q ss_pred HHHHhhC-CCcEEEecCCCCHHHHHHHHHhh---hhhcccc-CCCCC-chHH--HHHHHHHhcCC
Q psy4398 221 RTLTQHL-KIPVIANGGSKEIVDYGGVFSLN---CAFLRNH-YPVEK-LPKT--ILYAHCKYKRF 277 (306)
Q Consensus 221 ~~i~~~~-~ipvia~GGI~s~~~~~~~l~~~---v~vGral-l~~p~-~~~~--~l~~~~~~~g~ 277 (306)
+++++.+ ++|||++|||.|.+|+.+.+.+| ||+||++ |.+|. +.++ +|++||+++||
T Consensus 269 ~~~~~~~~~~pIIg~GGI~s~~Da~e~i~aGAs~Vqv~Ta~~y~GP~~~~~I~~~L~~~L~~~G~ 333 (354)
T 3tjx_A 269 NAFYRRCPGKLIFGCGGVYTGEDAFLHVLAGASMVQVGTALQEEGPSIFERLTSELLGVMAKKRY 333 (354)
T ss_dssp HHHHHHCTTSEEEEESSCCSHHHHHHHHHHTEEEEEECHHHHHHCTTHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHhcCCCcEEEeCCcCCHHHHHHHHHcCCCEEEEChhhhhcCchHHHHHHHHHHHHHHHcCC
Confidence 8888877 79999999999999999999886 4999996 68994 4444 99999999993
No 32
>4gbu_A NADPH dehydrogenase 1; alpha/beta barrel, enenone reductase, alkene reductase, NADP oxidoreductase, carvone, enenatioselectivity; HET: 0WV 1PE FMN; 1.18A {Saccharomyces pastorianus} PDB: 4ge8_A* 1oya_A* 1oyb_A* 1oyc_A* 3tx9_A* 3rnd_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A*
Probab=99.97 E-value=9.4e-31 Score=248.34 Aligned_cols=245 Identities=11% Similarity=0.090 Sum_probs=175.8
Q ss_pred ccccccccccCCceEEccCCCC--------C--CHHHHHHHH--HcCCCEEEecceechhhhhhhhhhhcccccccccCC
Q psy4398 20 ANANQANINYSNKIILAPMVRM--------N--TLPFRLLAL--DYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDP 87 (306)
Q Consensus 20 ~~~~~~~l~l~n~i~lAPm~~~--------t--~~~~r~~~~--~~G~g~~~te~~~~~~~~~~~~~~~~~l~~~~~~~~ 87 (306)
.|++|++++|+|||++|||+.. + +.+...+.+ ++|+|+++||.+.+.+.........+++ +...+..
T Consensus 19 ~P~~ig~l~lkNRiv~aPm~~~~a~~~g~v~~~d~~~~yy~~rA~GG~GLIite~~~V~~~g~~~~~~~gi~-~d~~i~~ 97 (400)
T 4gbu_A 19 KPIKIGNNELLHRAVIPPLTRMRALHPGNIPNRDWAVEYYTQRAQRPGTMIITEGAFISPQAGGYDNAPGVW-SEEQMVE 97 (400)
T ss_dssp SCEEETTEEESSSEEBCCCCCCCCBTTTTBCCTTTHHHHHHHHTCSTTCEEECSCEESSGGGCCCTTSCBSS-SHHHHHH
T ss_pred CCeeECCEEEcCcCEeCCccCCcCCCCCCCCCHHHHHHHHHHHHcCCeEEEEEcCeEECccccCCCCCCccC-CHHHHHH
Confidence 7889999999999999999842 2 233444433 4689999999998776543333322332 2223322
Q ss_pred CCCceeeecCCCCCCceEEEecCCC--------------------------------------------------HHHHH
Q psy4398 88 LDGSVVFRTCPREKNKIILQIGTAD--------------------------------------------------PERAL 117 (306)
Q Consensus 88 ~~~~~~~~~~~~~~~p~ivql~g~~--------------------------------------------------~~~~~ 117 (306)
++.+.+.+|++|.++++||++.+ .++|+
T Consensus 98 --~k~l~davH~~G~~i~~QL~H~Gr~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~pr~mt~~eI~~ii~~F~ 175 (400)
T 4gbu_A 98 --WTKIFNAIHEKKSFVWVQLAVLGWAAFPDNLARDGLRYDSASDNVFMDAEQEAKAKKANNPQHSLTKDEIKQYIKEYV 175 (400)
T ss_dssp --HHHHHHHHHHTTCEEEEEEECCGGGSCHHHHHHTTCCCEESCSSCCSCHHHHHHHHHTTCCCEECCHHHHHHHHHHHH
T ss_pred --HHHHHHHHHhcCCceEEeeeecCcccCccccccCCCcccCccccccCCCCcccccccCCCCCccCCHHHHHHHHHHHH
Confidence 66788888889999999997531 15799
Q ss_pred HHHHHHhc-CCCEEEEccC---------CCccccccCCccccccCChHHHHHHHHHHHhcc-cccEEEEeccC------C
Q psy4398 118 EAAKKVEH-DVAAIDINMG---------CPKQFSLTGGMGAALLSTPDIACNILTTLISNL-SIPVSCKIRVF------H 180 (306)
Q Consensus 118 ~aa~~~~~-g~d~veln~g---------cP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~g------~ 180 (306)
+||+++++ |||+||||.+ +|..|.|+|.||++++||.+++.||+++||+++ ..||.+|++.. .
T Consensus 176 ~AA~rA~~AGFDgVEIH~AhGYLl~QFLSp~tN~RtDeYGGS~ENR~Rf~lEVi~aVr~~vg~d~vgvRlS~~~~~~~~~ 255 (400)
T 4gbu_A 176 QAAKNSIAAGADGVEIHSANGYLLNQFLDPHSNTRTDEYGGSIENRARFTLEVVDALVEAIGHEKVGLRLSPYGVFNSMS 255 (400)
T ss_dssp HHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECTTCCTTTCC
T ss_pred HHHHHHHhcCcCeeeecccccchHHheecCcCCCCccccCCcHHHHHHHHHHHHHHHHHHcCCCcEEEEeccccccCCCC
Confidence 99999975 9999999976 799999999999999999999999999999998 35899999851 1
Q ss_pred C------hHHHHHHHHHHHHcC-----CcEEEEcccCCCCCC----CCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHH
Q psy4398 181 N------EADTIALCKRLEACG-----IIAIGVHGRTKAERP----RHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGG 245 (306)
Q Consensus 181 ~------~~~~~~~a~~l~~~G-----~d~i~v~~~~~~~~~----~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~ 245 (306)
+ .++..++++.++..+ .+.+++......... .+.........+++.+++|||++||+.+..++.+
T Consensus 256 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~~~~~~~~~~ 335 (400)
T 4gbu_A 256 GGAETGIVAQYAYVAGELEKRAKAGKRLAFVHLVEPRVTNPFLTEGEGEYEGGSNDFVYSIWKGPVIRAGNFALHPEVVR 335 (400)
T ss_dssp GGGSTTHHHHHHHHHHHHHHHHHTTCCCSEEEEECTTCSSTTSCTTTTCCCSCCSTHHHHHCCSCEEEESSCTTCHHHHH
T ss_pred ccchhhhHHHHHHHHHHHHHhhccCccccceeeecccCCCcccccccchhhhHHHHHHHHHhCCCEEEeCCCCChHHHHH
Confidence 1 234566677776543 456665432211111 0011112335578888999999999987666655
Q ss_pred HHHh----hhhhccccCCCCCchHHH
Q psy4398 246 VFSL----NCAFLRNHYPVEKLPKTI 267 (306)
Q Consensus 246 ~l~~----~v~vGrall~~p~~~~~~ 267 (306)
.+.. +|.+||++++||+|+++.
T Consensus 336 ~~~~~~aDlV~~gR~~iadPdl~~k~ 361 (400)
T 4gbu_A 336 EEVKDKRTLIGYGRFFISNPDLVDRL 361 (400)
T ss_dssp HHTTSTTEEEECCHHHHHCTTHHHHH
T ss_pred HHHcCCCeEhHHHHHHHHCcHHHHHH
Confidence 5533 569999999999999873
No 33
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.96 E-value=4.1e-30 Score=269.74 Aligned_cols=262 Identities=18% Similarity=0.202 Sum_probs=198.9
Q ss_pred ccccccccccCCceEEccCCCCCCHHHHHHHHHcCCCEEEecceechhhh--hh-hhhh-------------hccccccc
Q psy4398 20 ANANQANINYSNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLV--KT-ERKV-------------NDLLNTID 83 (306)
Q Consensus 20 ~~~~~~~l~l~n~i~lAPm~~~t~~~~r~~~~~~G~g~~~te~~~~~~~~--~~-~~~~-------------~~~l~~~~ 83 (306)
+++++.|++|+|||++|||+..++.+++..+...|.|++++++++..+.. .. .+.. ..++++..
T Consensus 533 ls~~~~G~~~~nPv~lAa~~~~~~~~~~~~~~~~g~G~vv~~t~~~~~~~~gn~~pr~~~~~~~g~~~~~~~~~~~n~e~ 612 (1025)
T 1gte_A 533 ISVEMAGLKFINPFGLASAAPTTSSSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRIVRGTTSGPMYGPGQSSFLNIEL 612 (1025)
T ss_dssp CCEEETTEEESSSEEECSSGGGSSHHHHHHHHHHTCSEEECCCBCCGGGCCCCCSSCEEECCTTCSCCSSCCSCEEECCC
T ss_pred ceeeeccccccCcccccCCCCCCCHHHHHHHHHCCcCeEEeceecccccccCCCCccEEeccccccccCCchhheeeecc
Confidence 89999999999999999999888888888777889999999988865422 10 0100 01333333
Q ss_pred ccCCCCCcee--eecCC--CCCCceEEEe-cCCCHHHHHHHHHHHh-cCCCEEEEccCCCccccccCCccccccCChHHH
Q psy4398 84 FVDPLDGSVV--FRTCP--REKNKIILQI-GTADPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIA 157 (306)
Q Consensus 84 ~~~~~~~~~~--~~~~~--~~~~p~ivql-~g~~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~ 157 (306)
+.+.+..... ...+. ..+.|+++|+ .+.++++|.+++++++ .|+|+||||++||+. ...+++|++++++++.+
T Consensus 613 ~~~~~~~~~~~~i~~~~~~~~~~~~i~~i~~g~~~~~~~~~a~~~~~~g~d~iein~~~P~~-~~~~~~G~~~~~~~~~~ 691 (1025)
T 1gte_A 613 ISEKTAAYWCQSVTELKADFPDNIVIASIMCSYNKNDWMELSRKAEASGADALELNLSCPHG-MGERGMGLACGQDPELV 691 (1025)
T ss_dssp SCSSCHHHHHHHHHHHHHHCTTSEEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCBCC-CC-----SBGGGCHHHH
T ss_pred ccchhHHHHHHHHHHHHhcCCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEECCCCCC-CCCCCcccccccCHHHH
Confidence 3333211100 01111 1246899988 5789999999999986 599999999999997 56688999999999999
Q ss_pred HHHHHHHHhcccccEEEEeccCCChHHHHHHHHHHHHcCCcEEEEc----------------------ccCCCCCCCCCC
Q psy4398 158 CNILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVH----------------------GRTKAERPRHRN 215 (306)
Q Consensus 158 ~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~----------------------~~~~~~~~~~p~ 215 (306)
.++++++++.+++||+||++ ++.+++.++++.++++|+|+|+++ +++..+.++++.
T Consensus 692 ~~iv~~v~~~~~~Pv~vK~~--~~~~~~~~~a~~~~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~sg~~ 769 (1025)
T 1gte_A 692 RNICRWVRQAVQIPFFAKLT--PNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTA 769 (1025)
T ss_dssp HHHHHHHHHHCSSCEEEEEC--SCSSCHHHHHHHHHHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEESGG
T ss_pred HHHHHHHHHhhCCceEEEeC--CChHHHHHHHHHHHHcCCCEEEEeccccccccccccccccccccccccccCCCCCccc
Confidence 99999999999999999999 566678999999999999999993 333334455554
Q ss_pred c----HHHHHHHHhhC-CCcEEEecCCCCHHHHHHHHHhh---hhhccccCC-CCCchH-H--HHHHHHHhcCCC-CCcc
Q psy4398 216 R----IEMIRTLTQHL-KIPVIANGGSKEIVDYGGVFSLN---CAFLRNHYP-VEKLPK-T--ILYAHCKYKRFE-VPKY 282 (306)
Q Consensus 216 ~----~~~v~~i~~~~-~ipvia~GGI~s~~~~~~~l~~~---v~vGrall~-~p~~~~-~--~l~~~~~~~g~~-~~~~ 282 (306)
. +++++++++.+ ++|||++|||.|.+|+.+++..| +++||+++. +|.+.+ + +|+.+|..+|++ +..+
T Consensus 770 ~~~~~~~~v~~v~~~~~~ipvi~~GGI~s~~da~~~l~~Ga~~v~vg~~~l~~~~~~~~~~~~~l~~~l~~~G~~~i~~l 849 (1025)
T 1gte_A 770 IRPIALRAVTTIARALPGFPILATGGIDSAESGLQFLHSGASVLQVCSAVQNQDFTVIQDYCTGLKALLYLKSIEELQGW 849 (1025)
T ss_dssp GHHHHHHHHHHHHHHSTTCCEEEESSCCSHHHHHHHHHTTCSEEEESHHHHTSCTTHHHHHHHHHHHHHHHTTCGGGTTS
T ss_pred chhHHHHHHHHHHHHcCCCCEEEecCcCCHHHHHHHHHcCCCEEEEeeccccCCccHHHHHHHHHHHHHHHcCCCCHHHH
Confidence 4 47899999999 99999999999999999999875 499999987 665544 3 999999999975 4444
Q ss_pred ee
Q psy4398 283 ET 284 (306)
Q Consensus 283 ~~ 284 (306)
.+
T Consensus 850 ~g 851 (1025)
T 1gte_A 850 DG 851 (1025)
T ss_dssp BT
T ss_pred hC
Confidence 43
No 34
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=99.89 E-value=6.8e-23 Score=191.20 Aligned_cols=229 Identities=16% Similarity=0.175 Sum_probs=160.3
Q ss_pred ccccccccccCCceEEccCCCCC-------CHHHHHHHHHcCCCEEEecceechhhhhhhhhhhcccccccccCCCCCce
Q psy4398 20 ANANQANINYSNKIILAPMVRMN-------TLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDGSV 92 (306)
Q Consensus 20 ~~~~~~~l~l~n~i~lAPm~~~t-------~~~~r~~~~~~G~g~~~te~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 92 (306)
+++++.|.+++|||++|||.+.+ +.+++..+.+.|+++.++++.+. +... ... ..+.
T Consensus 45 ~~~~i~g~~~~~P~~iApm~g~~~~~~~~~~~~~a~aa~~~G~~~~~~~~~~~--l~~~-~~~-~~~~------------ 108 (349)
T 1p0k_A 45 ISTKIGELSSSSPIFINAMTGGGGKLTYEINKSLARAASQAGIPLAVGSQMSA--LKDP-SER-LSYE------------ 108 (349)
T ss_dssp CCEEETTEEESCSEEEECCCCSCHHHHHHHHHHHHHHHHHHTCCEECCCCTTT--TTCH-HHH-HHHH------------
T ss_pred ceeEECCcccCCceEEcCccccchhhhhHHHHHHHHHHHHcCCcEEeccchhc--ccCc-ccc-ccee------------
Confidence 78999999999999999999888 56788888899999888876543 1110 000 0000
Q ss_pred eeecCCCCCCceEEEec-CCCHHHHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHH--HHHHHHHHHhccc
Q psy4398 93 VFRTCPREKNKIILQIG-TADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDI--ACNILTTLISNLS 169 (306)
Q Consensus 93 ~~~~~~~~~~p~ivql~-g~~~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~--~~eiv~~v~~~~~ 169 (306)
+.+.. ..+.|+++|+. +.+++.+.++++. .|+|+|+||++||+..... . .++++ +.++++++++.++
T Consensus 109 ~~~~~-~~~~pv~~~i~~~~~~~~~~~~~~~--~gad~i~i~~~~~~~~~~~--~-----~~~~~~~~~~~i~~vr~~~~ 178 (349)
T 1p0k_A 109 IVRKE-NPNGLIFANLGSEATAAQAKEAVEM--IGANALQIHLNVIQEIVMP--E-----GDRSFSGALKRIEQICSRVS 178 (349)
T ss_dssp HHHHH-CSSSCEEEEEETTCCHHHHHHHHHH--TTCSEEEEEECTTTTC---------------CTTHHHHHHHHHHHCS
T ss_pred hhhhh-CCCceeEEeecCCCCHHHHHHHHHh--cCCCeEEecccchhhhcCC--C-----CCcchHHHHHHHHHHHHHcC
Confidence 00000 13579999998 7788776643222 4899999999999853221 1 13333 6789999999899
Q ss_pred ccEEEEec-cCCChHHHHHHHHHHHHcCCcEEEE--cccC--------CCC------CCCCCCcHHHHHHHHhhC-CCcE
Q psy4398 170 IPVSCKIR-VFHNEADTIALCKRLEACGIIAIGV--HGRT--------KAE------RPRHRNRIEMIRTLTQHL-KIPV 231 (306)
Q Consensus 170 ~pv~vKir-~g~~~~~~~~~a~~l~~~G~d~i~v--~~~~--------~~~------~~~~p~~~~~v~~i~~~~-~ipv 231 (306)
+||.+|+. .+.+ .+.++.+.++|+|+|++ |+++ +.. ...++..++.+.++++.+ ++||
T Consensus 179 ~Pv~vK~~~~~~~----~~~a~~a~~~Gad~I~v~~~ggt~~~~~e~~r~~~~~~~~~~~g~~~~~~l~~v~~~~~~ipv 254 (349)
T 1p0k_A 179 VPVIVKEVGFGMS----KASAGKLYEAGAAAVDIGGYGGTNFSKIENLRRQRQISFFNSWGISTAASLAEIRSEFPASTM 254 (349)
T ss_dssp SCEEEEEESSCCC----HHHHHHHHHHTCSEEEEEC---------------CCGGGGTTCSCCHHHHHHHHHHHCTTSEE
T ss_pred CCEEEEecCCCCC----HHHHHHHHHcCCCEEEEcCCCCcchhhHHHhhcccchhhhhccCccHHHHHHHHHHhcCCCeE
Confidence 99999984 3344 46688899999999999 4443 111 233456788899999987 8999
Q ss_pred EEecCCCCHHHHHHHHHhh---hhhccccCCC-----C-C---ch-HH--HHHHHHHhcCCC
Q psy4398 232 IANGGSKEIVDYGGVFSLN---CAFLRNHYPV-----E-K---LP-KT--ILYAHCKYKRFE 278 (306)
Q Consensus 232 ia~GGI~s~~~~~~~l~~~---v~vGrall~~-----p-~---~~-~~--~l~~~~~~~g~~ 278 (306)
|++|||.+.+|+.+++..| |++||+++.. + . .. .+ +|+.+|...|+.
T Consensus 255 ia~GGI~~~~d~~k~l~~GAd~V~iG~~~l~~~~~~g~~~~~~~~~~~~~~l~~~m~~~G~~ 316 (349)
T 1p0k_A 255 IASGGLQDALDVAKAIALGASCTGMAGHFLKALTDSGEEGLLEEIQLILEELKLIMTVLGAR 316 (349)
T ss_dssp EEESSCCSHHHHHHHHHTTCSEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred EEECCCCCHHHHHHHHHcCCCEEEEcHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999999999999999875 4999998764 2 1 11 11 889999999954
No 35
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=99.88 E-value=2e-22 Score=188.89 Aligned_cols=228 Identities=11% Similarity=0.079 Sum_probs=172.6
Q ss_pred ccccccccccCCceEEccCC--CCCC----HHHHHHHHHcCCCEEEecceechhhhhhhhhhhcccccccccCCCCCcee
Q psy4398 20 ANANQANINYSNKIILAPMV--RMNT----LPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDGSVV 93 (306)
Q Consensus 20 ~~~~~~~l~l~n~i~lAPm~--~~t~----~~~r~~~~~~G~g~~~te~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 93 (306)
+++++.|.++++||++|||. +.++ .+++..+++.|++++++++.+ ..+.. ...
T Consensus 70 ~st~i~G~~l~~Pi~iAPma~~g~~~~~~e~~la~aa~~~G~~~~~s~~~s-~~le~-v~~------------------- 128 (368)
T 2nli_A 70 TSTEILGHKIKAPFIMAPIAAHGLAHTTKEAGTARAVSEFGTIMSISAYSG-ATFEE-ISE------------------- 128 (368)
T ss_dssp CCEEETTEEESSSEEECCCSCGGGTCTTHHHHHHHHHHHHTCCEEECTTCS-SCHHH-HHH-------------------
T ss_pred cceEECCEecCCceeecchhhccCCCcHHHHHHHHHHHHcCCCEEeechHh-HHHHH-HHH-------------------
Confidence 88999999999999999998 6654 578888999999999999875 11110 000
Q ss_pred eecCCCCCCceEEEecC-CCHHHHHHHHHHHhc-CCCEEEEccCCCcc------------------ccc----cCCcccc
Q psy4398 94 FRTCPREKNKIILQIGT-ADPERALEAAKKVEH-DVAAIDINMGCPKQ------------------FSL----TGGMGAA 149 (306)
Q Consensus 94 ~~~~~~~~~p~ivql~g-~~~~~~~~aa~~~~~-g~d~veln~gcP~~------------------~~~----~~~~G~~ 149 (306)
.. .+.|+.+||.+ .+++...++++++++ |+++++||++||.. +.. ....|+.
T Consensus 129 --~~--~~~~~~~QLy~~~d~~~~~~~~~ra~~aG~~ai~it~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~g~~ 204 (368)
T 2nli_A 129 --GL--NGGPRWFQIYMAKDDQQNRDILDEAKSDGATAIILTADSTVSGNRDRDVKNKFVYPFGMPIVQRYLRGTAEGMS 204 (368)
T ss_dssp --HH--TTCCEEEEECCBSSHHHHHHHHHHHHHTTCSCEEEESBCC---CBC--------CCSCCHHHHHHHTTSGGGC-
T ss_pred --hC--CCCCEEEEEeccCCHHHHHHHHHHHHHCCCCEEEEcCCCCcccchhHHHhhcccCcchhhhhhcccccCCCCch
Confidence 00 13589999987 788888888998875 99999999999972 110 0234555
Q ss_pred c---c--CChHHHHHHHHHHHhcccccEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHH
Q psy4398 150 L---L--STPDIACNILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLT 224 (306)
Q Consensus 150 l---~--~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~ 224 (306)
+ + .++++..+.++++++.++.||++|.- . ..+.++.++++|+|+|++++....+...++..++.+.+++
T Consensus 205 l~~~~~~~d~~~~~~~i~~lr~~~~~PvivK~v--~----~~e~a~~a~~~Gad~I~vs~~ggr~~~~g~~~~~~l~~v~ 278 (368)
T 2nli_A 205 LNNIYGASKQKISPRDIEEIAGHSGLPVFVKGI--Q----HPEDADMAIKRGASGIWVSNHGARQLYEAPGSFDTLPAIA 278 (368)
T ss_dssp ----CTTBCSBCCHHHHHHHHHHSSSCEEEEEE--C----SHHHHHHHHHTTCSEEEECCGGGTSCSSCCCHHHHHHHHH
T ss_pred HHhhhhccCchhhHHHHHHHHHHcCCCEEEEcC--C----CHHHHHHHHHcCCCEEEEcCCCcCCCCCCCChHHHHHHHH
Confidence 4 2 36777788899999999999999954 2 3567889999999999996543333455677899999999
Q ss_pred hhC--CCcEEEecCCCCHHHHHHHHHhhh---hhccccCCCC----------CchH--HHHHHHHHhcCCC
Q psy4398 225 QHL--KIPVIANGGSKEIVDYGGVFSLNC---AFLRNHYPVE----------KLPK--TILYAHCKYKRFE 278 (306)
Q Consensus 225 ~~~--~ipvia~GGI~s~~~~~~~l~~~v---~vGrall~~p----------~~~~--~~l~~~~~~~g~~ 278 (306)
+.+ ++|||++|||++.+|+.+++..|+ ++||+++... .+.. .+|+.+|...|..
T Consensus 279 ~~v~~~ipVia~GGI~~g~D~~kalalGAd~V~iGr~~l~~~~~~G~~gv~~~l~~l~~el~~~m~~~G~~ 349 (368)
T 2nli_A 279 ERVNKRVPIVFDSGVRRGEHVAKALASGADVVALGRPVLFGLALGGWQGAYSVLDYFQKDLTRVMQLTGSQ 349 (368)
T ss_dssp HHHTTSSCEEECSSCCSHHHHHHHHHTTCSEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred HHhCCCCeEEEECCCCCHHHHHHHHHcCCCEEEECHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 988 699999999999999999998754 9999887542 1111 1888899999953
No 36
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=99.86 E-value=2.9e-21 Score=181.43 Aligned_cols=234 Identities=15% Similarity=0.098 Sum_probs=170.9
Q ss_pred ccccccccccCCceEEccCCCCCCHH-------HHHHHHHcCCCEEEecceechhhhhhhhhhhcccccccccCCCCCce
Q psy4398 20 ANANQANINYSNKIILAPMVRMNTLP-------FRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDGSV 92 (306)
Q Consensus 20 ~~~~~~~l~l~n~i~lAPm~~~t~~~-------~r~~~~~~G~g~~~te~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 92 (306)
+++++.|.++++||++||| ++++.. ++..+++.|+.++++++.+.. + ..
T Consensus 61 ~~t~i~G~~~~~Pi~iAPm-g~~~l~~~~~e~a~a~aa~~~G~~~~~s~~~~~~-i----ee------------------ 116 (370)
T 1gox_A 61 MTTTILGFKISMPIMIAPT-AMQKMAHPEGEYATARAASAAGTIMTLSSWATSS-V----EE------------------ 116 (370)
T ss_dssp CCEEETTEEESSSEEECCC-SCGGGTCTTHHHHHHHHHHHTTCCEEECTTCSSC-H----HH------------------
T ss_pred CceEECCcccCCceeEccc-chhhhccchHHHHHHHHHHHcCCCeeccCCCCCC-H----HH------------------
Confidence 8899999999999999999 677654 888889999999999876421 1 00
Q ss_pred eeecCCCCCCceEEEec-CCCHHHHHHHHHHHhc-CCCEEEEccCCCcc--------------------cccc-------
Q psy4398 93 VFRTCPREKNKIILQIG-TADPERALEAAKKVEH-DVAAIDINMGCPKQ--------------------FSLT------- 143 (306)
Q Consensus 93 ~~~~~~~~~~p~ivql~-g~~~~~~~~aa~~~~~-g~d~veln~gcP~~--------------------~~~~------- 143 (306)
+... .+.|..+||. +.+++...+.++++++ |++.|+||+.||.. +...
T Consensus 117 v~~~---~~~~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~it~d~p~~g~r~~d~r~~~~~p~~~~~~~~~~~~~~~~~ 193 (370)
T 1gox_A 117 VAST---GPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPFLTLKNFEGIDLGKMD 193 (370)
T ss_dssp HHTT---CCCCEEEEECCBSSHHHHHHHHHHHHHTTCCEEEEECSCSSCCCCHHHHHTTCCCCTTCCCGGGSSSCCC---
T ss_pred HHhh---cCCCceEEEecCCCchHHHHHHHHHHHCCCCEEEEeCCCCcccccHHHHHhccCCCcccchhhhhhhhhhccc
Confidence 0001 1257899995 7888888888888875 99999999999864 1111
Q ss_pred CCccccc------cCChHHHHHHHHHHHhcccccEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcH
Q psy4398 144 GGMGAAL------LSTPDIACNILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRI 217 (306)
Q Consensus 144 ~~~G~~l------~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~ 217 (306)
...|+.+ +.++.+..+.++++++.+++|+.+|.. .+ .+.++.+.++|+|+|++++....+...++..+
T Consensus 194 ~~~g~~~~~~v~~~~~~~~~~~~i~~l~~~~~~pv~vK~~--~~----~e~a~~a~~~Gad~I~vs~~ggr~~~~~~~~~ 267 (370)
T 1gox_A 194 KANDSGLSSYVAGQIDRSLSWKDVAWLQTITSLPILVKGV--IT----AEDARLAVQHGAAGIIVSNHGARQLDYVPATI 267 (370)
T ss_dssp ------HHHHHHHTBCTTCCHHHHHHHHHHCCSCEEEECC--CS----HHHHHHHHHTTCSEEEECCGGGTSSTTCCCHH
T ss_pred cccCccHHHHHHhhcCccchHHHHHHHHHHhCCCEEEEec--CC----HHHHHHHHHcCCCEEEECCCCCccCCCcccHH
Confidence 1123333 335555567799999999999999998 33 35678889999999999442111223345689
Q ss_pred HHHHHHHhhC--CCcEEEecCCCCHHHHHHHHHhh---hhhccccCCCC---------Cch-H--HHHHHHHHhcCCC-C
Q psy4398 218 EMIRTLTQHL--KIPVIANGGSKEIVDYGGVFSLN---CAFLRNHYPVE---------KLP-K--TILYAHCKYKRFE-V 279 (306)
Q Consensus 218 ~~v~~i~~~~--~ipvia~GGI~s~~~~~~~l~~~---v~vGrall~~p---------~~~-~--~~l~~~~~~~g~~-~ 279 (306)
+.+.++++.+ ++|||++|||++.+|+.+++..| |++||+++.+. ... . .+|+.+|...|+. +
T Consensus 268 ~~l~~v~~~~~~~ipvia~GGI~~~~D~~k~l~~GAdaV~iGr~~l~~~~~~G~~gv~~~~~~l~~el~~~m~~~G~~~i 347 (370)
T 1gox_A 268 MALEEVVKAAQGRIPVFLDGGVRRGTDVFKALALGAAGVFIGRPVVFSLAAEGEAGVKKVLQMMRDEFELTMALSGCRSL 347 (370)
T ss_dssp HHHHHHHHHTTTSSCEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSBT
T ss_pred HHHHHHHHHhCCCCEEEEECCCCCHHHHHHHHHcCCCEEeecHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCCH
Confidence 9999999998 79999999999999999999875 49999987532 111 1 1899999999975 4
Q ss_pred Ccceehh
Q psy4398 280 PKYETVQ 286 (306)
Q Consensus 280 ~~~~~~~ 286 (306)
.++....
T Consensus 348 ~el~~~~ 354 (370)
T 1gox_A 348 KEISRSH 354 (370)
T ss_dssp TTCCGGG
T ss_pred HHhhhcc
Confidence 4444433
No 37
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=99.85 E-value=4.4e-21 Score=181.04 Aligned_cols=227 Identities=14% Similarity=0.086 Sum_probs=168.2
Q ss_pred ccccccccccCCceEEccCCCCCCHH-------HHHHHHHcCCCEEEecceechhhhhhhhhhhcccccccccCCCCCce
Q psy4398 20 ANANQANINYSNKIILAPMVRMNTLP-------FRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDGSV 92 (306)
Q Consensus 20 ~~~~~~~l~l~n~i~lAPm~~~t~~~-------~r~~~~~~G~g~~~te~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 92 (306)
+++++.|.++++||++||| +.++.. ++..|++.|+.++++++.+. .+.. ..
T Consensus 84 ~st~i~G~~l~~Pi~iAPm-g~~~l~~~~~e~~laraA~~~G~~~~~s~~~s~-~le~-v~------------------- 141 (392)
T 2nzl_A 84 LSTSVLGQRVSMPICVGAT-AMQRMAHVDGELATVRACQSLGTGMMLSSWATS-SIEE-VA------------------- 141 (392)
T ss_dssp CCEEETTEEESSSEEECCC-SCGGGTSTTHHHHHHHHHHHHTCEEEECTTCSS-CHHH-HH-------------------
T ss_pred cceEECCEecCCceEeccc-cccccccchHHHHHHHHHHHcCCCeeccchHHH-HHHH-HH-------------------
Confidence 8899999999999999999 555443 88888899999999987641 1110 00
Q ss_pred eeecCCCCCCceEEEecC-CCHHHHHHHHHHHhc-CCCEEEEccCCCcc---------------cc-----c------cC
Q psy4398 93 VFRTCPREKNKIILQIGT-ADPERALEAAKKVEH-DVAAIDINMGCPKQ---------------FS-----L------TG 144 (306)
Q Consensus 93 ~~~~~~~~~~p~ivql~g-~~~~~~~~aa~~~~~-g~d~veln~gcP~~---------------~~-----~------~~ 144 (306)
... .+.|+.+||.. .+++...+.++++++ |++++.||++||.. .. . ..
T Consensus 142 --~~~--~~~~~~~QLy~~~d~~~~~~~~~ra~~~G~~al~itvd~p~~g~R~~d~r~~~~lp~~~~~~n~~~~~~~~~p 217 (392)
T 2nzl_A 142 --EAG--PEALRWLQLYIYKDREVTKKLVRQAEKMGYKAIFVTVDTPYLGNRLDDVRNRFKLPPQLRMKNFETSTLSFSP 217 (392)
T ss_dssp --HHC--TTSEEEEEECCBSSHHHHHHHHHHHHHTTCCCEEEECSCSSCCCCHHHHHHTCCCCTTCCCTTC---------
T ss_pred --Hhc--CCCcEEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCCCCCccchhHhHhhccCCccccchhhhhhhhcccCc
Confidence 000 23589999976 788888888888875 99999999999974 11 0 00
Q ss_pred ----Cccc---cccC---ChHHHHHHHHHHHhcccccEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCC
Q psy4398 145 ----GMGA---ALLS---TPDIACNILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHR 214 (306)
Q Consensus 145 ----~~G~---~l~~---~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p 214 (306)
+.|+ .++. ++++..+.++++++.++.||.+|.- .+ .+.|+.++++|+|+|++++....+...++
T Consensus 218 ~~~~~~g~~~~~~~~~~~d~~~~~~~i~~lr~~~~~PvivKgv--~~----~e~A~~a~~aGad~I~vs~~ggr~~~~g~ 291 (392)
T 2nzl_A 218 EENFGDDSGLAAYVAKAIDPSISWEDIKWLRRLTSLPIVAKGI--LR----GDDAREAVKHGLNGILVSNHGARQLDGVP 291 (392)
T ss_dssp --------CHHHHHHHHBCTTCCHHHHHHHC--CCSCEEEEEE--CC----HHHHHHHHHTTCCEEEECCGGGTSSTTCC
T ss_pred cccccCcchHHHHHhhcCChHHHHHHHHHHHHhhCCCEEEEec--CC----HHHHHHHHHcCCCEEEeCCCCCCcCCCCc
Confidence 1122 1222 6767778899999999999999954 23 56688999999999999664433345567
Q ss_pred CcHHHHHHHHhhC--CCcEEEecCCCCHHHHHHHHHhh---hhhccccCCCCC---------ch-H--HHHHHHHHhcCC
Q psy4398 215 NRIEMIRTLTQHL--KIPVIANGGSKEIVDYGGVFSLN---CAFLRNHYPVEK---------LP-K--TILYAHCKYKRF 277 (306)
Q Consensus 215 ~~~~~v~~i~~~~--~ipvia~GGI~s~~~~~~~l~~~---v~vGrall~~p~---------~~-~--~~l~~~~~~~g~ 277 (306)
..++.+.++++++ ++|||++|||++.+|+.+++..| |++||+++.... .. . .+|+.+|...|.
T Consensus 292 ~~~~~l~~v~~av~~~ipVia~GGI~~g~Dv~kalalGAd~V~iGr~~l~~~~~~g~~gv~~~l~~l~~el~~~m~~~G~ 371 (392)
T 2nzl_A 292 ATIDVLPEIVEAVEGKVEVFLDGGVRKGTDVLKALALGAKAVFVGRPIVWGLAFQGEKGVQDVLEILKEEFRLAMALSGC 371 (392)
T ss_dssp CHHHHHHHHHHHHTTSSEEEECSSCCSHHHHHHHHHTTCSEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred ChHHHHHHHHHHcCCCCEEEEECCCCCHHHHHHHHHhCCCeeEECHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhCC
Confidence 7899999999988 59999999999999999999875 499999876421 11 1 289999999996
Q ss_pred C
Q psy4398 278 E 278 (306)
Q Consensus 278 ~ 278 (306)
.
T Consensus 372 ~ 372 (392)
T 2nzl_A 372 Q 372 (392)
T ss_dssp S
T ss_pred C
Confidence 4
No 38
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=99.84 E-value=8.6e-21 Score=175.83 Aligned_cols=228 Identities=14% Similarity=0.079 Sum_probs=155.7
Q ss_pred ccccccccccCCceEEccCCCCCCH------HHHHHHHHcCCCEEEecceechhhhhhhhhhhcccccccccCCCCCcee
Q psy4398 20 ANANQANINYSNKIILAPMVRMNTL------PFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDGSVV 93 (306)
Q Consensus 20 ~~~~~~~l~l~n~i~lAPm~~~t~~------~~r~~~~~~G~g~~~te~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 93 (306)
+++++.|.++++|+++|||.+.++. +++..+++.|++++++++.+. +..... ...+ ++.
T Consensus 48 ~~~~i~g~~l~~P~~iapm~g~~~~~~~~~~~la~~a~~~G~~~~~~~~~~~--le~~~~--~~~~---ql~-------- 112 (332)
T 1vcf_A 48 LTTPFLGKTLKAPFLIGAMTGGEENGERINLALAEAAEALGVGMMLGSGRIL--LERPEA--LRSF---RVR-------- 112 (332)
T ss_dssp CCEEETTEEESSSEEECCCC---CCHHHHHHHHHHHHHHHTCEEEEEECHHH--HHCTTT--HHHH---CCT--------
T ss_pred cceEECCcccCCceEEeccccCCcchhHHHHHHHHHHHHcCCCEEeCCchhc--ccCCCc--cceE---Eee--------
Confidence 7889999999999999999987653 677888899999999998763 211000 0000 000
Q ss_pred eecCCCCCCceEEE-----ecCCCHHHHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc
Q psy4398 94 FRTCPREKNKIILQ-----IGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL 168 (306)
Q Consensus 94 ~~~~~~~~~p~ivq-----l~g~~~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~ 168 (306)
....+.|++.+ +.+.+++.+.++++.+ +++++++|+.+...... + | . .+.+.+.++++++++ +
T Consensus 113 ---~~~~d~pv~~~~~~~q~~~~~~~~~~~a~~~~--~~~a~~i~~n~~~~~~~-~--~-~--~~~~~~~~~i~~vr~-~ 180 (332)
T 1vcf_A 113 ---KVAPKALLIANLGLAQLRRYGRDDLLRLVEML--EADALAFHVNPLQEAVQ-R--G-D--TDFRGLVERLAELLP-L 180 (332)
T ss_dssp ---TTCSSSCEEEEEEGGGGGTCCHHHHHHHHHHH--TCSEEEEECCHHHHHHT-T--S-C--CCCTTHHHHHHHHCS-C
T ss_pred ---ccCCCceeecccChhhhhccChHHHHHHHhhc--CCCceeeccchHHHHhc-C--C-C--ccHHHHHHHHHHHHc-C
Confidence 01124677744 4566777777776644 67888887754322111 0 1 1 111236788999999 9
Q ss_pred cccEEEE-eccCCChHHHHHHHHHHHHcCCcEEEEc--ccC--------CCC--------CCCCCCcHHHHHHHHhhC-C
Q psy4398 169 SIPVSCK-IRVFHNEADTIALCKRLEACGIIAIGVH--GRT--------KAE--------RPRHRNRIEMIRTLTQHL-K 228 (306)
Q Consensus 169 ~~pv~vK-ir~g~~~~~~~~~a~~l~~~G~d~i~v~--~~~--------~~~--------~~~~p~~~~~v~~i~~~~-~ 228 (306)
++||++| ++.|++ .+.++.++++|+|+|+++ +++ +.. ...++..++.+.++++.+ +
T Consensus 181 ~~Pv~vK~v~~g~~----~e~a~~~~~~G~d~I~vs~~ggt~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~v~~~~~~ 256 (332)
T 1vcf_A 181 PFPVMVKEVGHGLS----REAALALRDLPLAAVDVAGAGGTSWARVEEWVRFGEVRHPELCEIGIPTARAILEVREVLPH 256 (332)
T ss_dssp SSCEEEECSSSCCC----HHHHHHHTTSCCSEEECCCBTSCCHHHHHHTC--------CCTTCSCBHHHHHHHHHHHCSS
T ss_pred CCCEEEEecCCCCC----HHHHHHHHHcCCCEEEeCCCCCCcchhHHHhhccccchhhhHhhccccHHHHHHHHHHhcCC
Confidence 9999999 654444 345788999999999994 442 211 234456788999999999 8
Q ss_pred CcEEEecCCCCHHHHHHHHHhh---hhhccccCCCC--------CchH---HHHHHHHHhcCCC
Q psy4398 229 IPVIANGGSKEIVDYGGVFSLN---CAFLRNHYPVE--------KLPK---TILYAHCKYKRFE 278 (306)
Q Consensus 229 ipvia~GGI~s~~~~~~~l~~~---v~vGrall~~p--------~~~~---~~l~~~~~~~g~~ 278 (306)
+|||++|||++.+|+.+++..| |++||+++..+ ...+ .+|+.+|...|++
T Consensus 257 ipvia~GGI~~~~d~~kal~~GAd~V~igr~~l~~~~~G~~gv~~~~~~l~~el~~~m~~~G~~ 320 (332)
T 1vcf_A 257 LPLVASGGVYTGTDGAKALALGADLLAVARPLLRPALEGAERVAAWIGDYLEELRTALFAIGAR 320 (332)
T ss_dssp SCEEEESSCCSHHHHHHHHHHTCSEEEECGGGHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred CeEEEECCCCCHHHHHHHHHhCCChHhhhHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999875 49999988422 1111 2999999999954
No 39
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=99.84 E-value=3.6e-20 Score=180.23 Aligned_cols=229 Identities=12% Similarity=0.080 Sum_probs=170.4
Q ss_pred ccccccccccCCceEEccCCC---C----CCHHHHHHHHH--cCCCEEEecceec-hhhhhhhhhhhcccccccccCCCC
Q psy4398 20 ANANQANINYSNKIILAPMVR---M----NTLPFRLLALD--YGADLVYSEELVD-HKLVKTERKVNDLLNTIDFVDPLD 89 (306)
Q Consensus 20 ~~~~~~~l~l~n~i~lAPm~~---~----t~~~~r~~~~~--~G~g~~~te~~~~-~~~~~~~~~~~~~l~~~~~~~~~~ 89 (306)
+++++.|.++++||++|||.. . ++.+++..|++ .|++++++++.+. .....
T Consensus 179 ~st~i~G~~l~~Pi~iAPma~~~l~~~~~~e~alaraA~~~~~G~~~~~s~~a~~s~e~v~------------------- 239 (511)
T 1kbi_A 179 ISTDMLGSHVDVPFYVSATALCKLGNPLEGEKDVARGCGQGVTKVPQMISTLASCSPEEII------------------- 239 (511)
T ss_dssp CCEEETTEEESSSEEECCCSCGGGTCTTTTHHHHHHHHHSSSSCCCEEECTTCSSCHHHHH-------------------
T ss_pred CccccCCccCCCCeEeccchhccccChhhHHHHHHHHHHHhCCCeeEEeCCcccCCHHHHH-------------------
Confidence 889999999999999999996 3 35678888989 9999999987432 11110
Q ss_pred CceeeecCCCCCCceEEEec-CCCHHHHHHHHHHHhc-CCCEEEEccCCCcc-c---------------cc------cCC
Q psy4398 90 GSVVFRTCPREKNKIILQIG-TADPERALEAAKKVEH-DVAAIDINMGCPKQ-F---------------SL------TGG 145 (306)
Q Consensus 90 ~~~~~~~~~~~~~p~ivql~-g~~~~~~~~aa~~~~~-g~d~veln~gcP~~-~---------------~~------~~~ 145 (306)
...+..+.|...||. +.+++...++++++++ ||++|.||+.||.. + .. .+.
T Consensus 240 -----~~~~~~~~~~~~QLy~~~d~~~~~~~~~rae~aG~~al~itvd~p~~g~R~~~~r~g~~~p~~~~~~~~g~~~~~ 314 (511)
T 1kbi_A 240 -----EAAPSDKQIQWYQLYVNSDRKITDDLVKNVEKLGVKALFVTVDAPSLGQREKDMKLKFSNTKAGPKAMKKTNVEE 314 (511)
T ss_dssp -----HTCCCSSCCEEEEECCCSSHHHHHHHHHHHHHHTCSCEEEECSCSSCCCCHHHHHHHHTTCC-------CCCCSS
T ss_pred -----hhcCCCCCCeEEEEeecCCHHHHHHHHHHHHHcCCCEEEEeCCCCCccccHHHHhccCCCCcccccccccccccc
Confidence 000012358899997 8889889999999975 99999999999871 1 00 011
Q ss_pred ccc--ccc---CChHHHHHHHHHHHhcccccEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHH
Q psy4398 146 MGA--ALL---STPDIACNILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMI 220 (306)
Q Consensus 146 ~G~--~l~---~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v 220 (306)
+++ .++ .++++..+.++++++.+++||.+|.- .+ .+.|+.++++|+|+|++++....+....+..++.+
T Consensus 315 ~~g~~~~~~~~~d~~~~~~~i~~lr~~~~~PvivKgv--~~----~e~A~~a~~aGad~I~vs~hgG~~~d~~~~~~~~l 388 (511)
T 1kbi_A 315 SQGASRALSKFIDPSLTWKDIEELKKKTKLPIVIKGV--QR----TEDVIKAAEIGVSGVVLSNHGGRQLDFSRAPIEVL 388 (511)
T ss_dssp CCCGGGGCBTTBCTTCCHHHHHHHHHHCSSCEEEEEE--CS----HHHHHHHHHTTCSEEEECCTTTTSSTTCCCHHHHH
T ss_pred cccHHHHHhhccChHhHHHHHHHHHHHhCCcEEEEeC--CC----HHHHHHHHHcCCCEEEEcCCCCccCCCCCchHHHH
Confidence 111 122 46777778899999999999999954 22 56688999999999999543222233445678999
Q ss_pred HHHHhhC-------CCcEEEecCCCCHHHHHHHHHhhh---hhccccCCCCC---------ch-H--HHHHHHHHhcCCC
Q psy4398 221 RTLTQHL-------KIPVIANGGSKEIVDYGGVFSLNC---AFLRNHYPVEK---------LP-K--TILYAHCKYKRFE 278 (306)
Q Consensus 221 ~~i~~~~-------~ipvia~GGI~s~~~~~~~l~~~v---~vGrall~~p~---------~~-~--~~l~~~~~~~g~~ 278 (306)
.++++++ ++|||++|||++..|+.+++..|+ ++||+++.... .. . .+|+.+|...|..
T Consensus 389 ~~v~~~v~~~~~~~~ipVia~GGI~~g~Dv~kaLalGAdaV~iGr~~l~~~~~~G~~gv~~~l~~l~~el~~~m~~~G~~ 468 (511)
T 1kbi_A 389 AETMPILEQRNLKDKLEVFVDGGVRRGTDVLKALCLGAKGVGLGRPFLYANSCYGRNGVEKAIEILRDEIEMSMRLLGVT 468 (511)
T ss_dssp HHHHHHHHTTTCBTTBEEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHhhccCCCcEEEEECCCCCHHHHHHHHHcCCCEEEECHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9998887 799999999999999999998764 99999875331 11 1 2899999999975
No 40
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=99.81 E-value=8.2e-19 Score=162.49 Aligned_cols=199 Identities=16% Similarity=0.151 Sum_probs=148.4
Q ss_pred cccCCceEEccCCCCCCHHHHHHHHHcCC-CEEEecceechhhhhhhhhhhcccccccccCCCCCceeeecCCCCCCceE
Q psy4398 27 INYSNKIILAPMVRMNTLPFRLLALDYGA-DLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDGSVVFRTCPREKNKII 105 (306)
Q Consensus 27 l~l~n~i~lAPm~~~t~~~~r~~~~~~G~-g~~~te~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~i 105 (306)
+.+++||++|||.++++..++..+.++|+ |++.+++++++.+....+.... . .+.|+.
T Consensus 9 l~~~~Pii~apM~g~s~~~la~av~~aG~lG~i~~~~~~~~~~~~~i~~i~~------------------~---~~~p~g 67 (332)
T 2z6i_A 9 LKIDYPIFQGGMAWVADGDLAGAVSKAGGLGIIGGGNAPKEVVKANIDKIKS------------------L---TDKPFG 67 (332)
T ss_dssp HTCSSSEEECCCTTTCCHHHHHHHHHHTSBEEEECTTCCHHHHHHHHHHHHH------------------H---CCSCEE
T ss_pred hCCCCCEEeCCCCCCCcHHHHHHHHhCCCcEEeCCCCCCHHHHHHHHHHHHH------------------h---cCCCEE
Confidence 34899999999999999999988777774 9999988765543221111100 0 135899
Q ss_pred EEecCCCHHHHHHHHHHHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEeccCCChHH
Q psy4398 106 LQIGTADPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFHNEAD 184 (306)
Q Consensus 106 vql~g~~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~ 184 (306)
+|++..+++ +.+.++.+. .|+|+|++|.+||. ++++++++ .++|+++|+.
T Consensus 68 vnl~~~~~~-~~~~~~~a~~~g~d~V~~~~g~p~--------------------~~i~~l~~-~g~~v~~~v~------- 118 (332)
T 2z6i_A 68 VNIMLLSPF-VEDIVDLVIEEGVKVVTTGAGNPS--------------------KYMERFHE-AGIIVIPVVP------- 118 (332)
T ss_dssp EEECTTSTT-HHHHHHHHHHTTCSEEEECSSCGG--------------------GTHHHHHH-TTCEEEEEES-------
T ss_pred EEecCCCCC-HHHHHHHHHHCCCCEEEECCCChH--------------------HHHHHHHH-cCCeEEEEeC-------
Confidence 999886653 666666665 59999999999873 24566665 3889999985
Q ss_pred HHHHHHHHHHcCCcEEEEcccCCCCCCC-CCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHh---hhhhccccCCC
Q psy4398 185 TIALCKRLEACGIIAIGVHGRTKAERPR-HRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSL---NCAFLRNHYPV 260 (306)
Q Consensus 185 ~~~~a~~l~~~G~d~i~v~~~~~~~~~~-~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~---~v~vGrall~~ 260 (306)
..+.++.+++.|+|+|.+++... +... ....|++++++++.+++|||++|||+|.+++.++++. ++++||+++.+
T Consensus 119 ~~~~a~~~~~~GaD~i~v~g~~~-GG~~g~~~~~~ll~~i~~~~~iPViaaGGI~~~~~~~~al~~GAdgV~vGs~~l~~ 197 (332)
T 2z6i_A 119 SVALAKRMEKIGADAVIAEGMEA-GGHIGKLTTMTLVRQVATAISIPVIAAGGIADGEGAAAGFMLGAEAVQVGTRFVVA 197 (332)
T ss_dssp SHHHHHHHHHTTCSCEEEECTTS-SEECCSSCHHHHHHHHHHHCSSCEEEESSCCSHHHHHHHHHTTCSEEEECHHHHTB
T ss_pred CHHHHHHHHHcCCCEEEEECCCC-CCCCCCccHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCCEEEecHHHhcC
Confidence 34567888999999999987643 2222 2468899999999999999999999999999999987 45999999999
Q ss_pred CCch-HHHHHHHHHhcC
Q psy4398 261 EKLP-KTILYAHCKYKR 276 (306)
Q Consensus 261 p~~~-~~~l~~~~~~~g 276 (306)
|.+. ....++.+.+-.
T Consensus 198 ~e~~~~~~~k~~~~~~~ 214 (332)
T 2z6i_A 198 KESNAHPNYKEKILKAR 214 (332)
T ss_dssp TTCCSCHHHHHHHHHCC
T ss_pred ccccccHHHHHHHHhCC
Confidence 9443 345666665433
No 41
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=99.77 E-value=1.5e-18 Score=162.30 Aligned_cols=230 Identities=16% Similarity=0.141 Sum_probs=154.5
Q ss_pred ccccccccccCCceEEccCCCCCCHH------HHHHHHHcCCCEEEecceec--hhhhhhhhhhhcccccccccCCCCCc
Q psy4398 20 ANANQANINYSNKIILAPMVRMNTLP------FRLLALDYGADLVYSEELVD--HKLVKTERKVNDLLNTIDFVDPLDGS 91 (306)
Q Consensus 20 ~~~~~~~l~l~n~i~lAPm~~~t~~~------~r~~~~~~G~g~~~te~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~ 91 (306)
++++++|.+|++||++|||++.++.+ ++..|++.|+++.+.++... ++....... .+.
T Consensus 49 ~st~~~g~~l~~Pv~ia~MtGgt~~~~~in~~la~~a~~~G~~~~vGs~~~~l~~~~~~~s~~---~vr----------- 114 (368)
T 3vkj_A 49 TKTKFFRKEISVPVMVTGMTGGRNELGRINKIIAEVAEKFGIPMGVGSQRVAIEKAEARESFA---IVR----------- 114 (368)
T ss_dssp CCEEETTEEESSSEEECCCCCSSHHHHHHHHHHHHHHHHHTCCEECCCCHHHHHCGGGSHHHH---HHH-----------
T ss_pred ceeEECCEeccCCeEEecCCCCCchhhHHHHHHHHHHHHhCCCeeeecchhccCCHHHHhhHH---HHH-----------
Confidence 88899999999999999999998876 47778899999999998643 222111100 000
Q ss_pred eeeecCCCCCCceEEEecC------CCHHHHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChH-HHHHHHHHH
Q psy4398 92 VVFRTCPREKNKIILQIGT------ADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPD-IACNILTTL 164 (306)
Q Consensus 92 ~~~~~~~~~~~p~ivql~g------~~~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~-~~~eiv~~v 164 (306)
+.. .+.|++.+++. .+++...++++.+.+++..|.||.. ..... ..|. .+.+ ...+.++.+
T Consensus 115 ---~~a--p~~~~~anlg~~ql~~~~~~~~~~~av~~~~a~al~Ihln~~---~~~~~-p~g~---~~~~~~~~~~i~~i 182 (368)
T 3vkj_A 115 ---KVA--PTIPIIANLGMPQLVKGYGLKEFQDAIQMIEADAIAVHLNPA---QEVFQ-PEGE---PEYQIYALEKLRDI 182 (368)
T ss_dssp ---HHC--SSSCEEEEEEGGGGGTTCCHHHHHHHHHHTTCSEEEEECCHH---HHHHS-SSCC---CBCBTHHHHHHHHH
T ss_pred ---HhC--cCcceecCcCeeecCCCCCHHHHHHHHHHhcCCCeEEEecch---hhhhC-CCCC---chhhHHHHHHHHHH
Confidence 001 13467666654 6778877877777444444444422 11111 0111 1112 367788999
Q ss_pred HhcccccEEEEeccCCChHHHHHHHHHHHHcCCcEEEEccc--C--------CCC-------------CCCCCCcHHHHH
Q psy4398 165 ISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGR--T--------KAE-------------RPRHRNRIEMIR 221 (306)
Q Consensus 165 ~~~~~~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~--~--------~~~-------------~~~~p~~~~~v~ 221 (306)
++.+++||.+|. .|+.. ..+.|+.++++|+|+|++++. + +.. ...+.+....+.
T Consensus 183 ~~~~~vPVivK~-vG~g~--s~~~A~~l~~aGad~I~V~g~GGt~~~~iE~~R~~~~~~~~~~~~~~~~~~g~pt~~~l~ 259 (368)
T 3vkj_A 183 SKELSVPIIVKE-SGNGI--SMETAKLLYSYGIKNFDTSGQGGTNWIAIEMIRDIRRGNWKAESAKNFLDWGVPTAASIM 259 (368)
T ss_dssp HTTCSSCEEEEC-SSSCC--CHHHHHHHHHTTCCEEECCCBTSBCHHHHHHHHHHHTTCTHHHHHHHTTTCSCBHHHHHH
T ss_pred HHHcCCCEEEEe-CCCCC--CHHHHHHHHhCCCCEEEEeCCCCCcccchhhhhcccccccchhhccccccccccHHHHHH
Confidence 999999999996 33322 256789999999999999553 2 100 000223456778
Q ss_pred HHHhhC-CCcEEEecCCCCHHHHHHHHHhhh---hhccccCC----CCC-ch----H--HHHHHHHHhcCCC
Q psy4398 222 TLTQHL-KIPVIANGGSKEIVDYGGVFSLNC---AFLRNHYP----VEK-LP----K--TILYAHCKYKRFE 278 (306)
Q Consensus 222 ~i~~~~-~ipvia~GGI~s~~~~~~~l~~~v---~vGrall~----~p~-~~----~--~~l~~~~~~~g~~ 278 (306)
++++.+ ++|||++|||++..|+.+++..|+ ++||+++. +|. .. . .+|+.+|...|++
T Consensus 260 ~v~~~~~~ipvia~GGI~~~~d~~kal~lGA~~v~ig~~~l~~~~~G~~~v~~~l~~l~~eL~~~m~~~G~~ 331 (368)
T 3vkj_A 260 EVRYSVPDSFLVGSGGIRSGLDAAKAIALGADIAGMALPVLKSAIEGKESLEQFFRKIIFELKAAMMLTGSK 331 (368)
T ss_dssp HHHHHSTTCEEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHcCCCcEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 888888 599999999999999999998764 99998873 551 11 1 2999999999955
No 42
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=99.77 E-value=2.3e-18 Score=162.08 Aligned_cols=225 Identities=13% Similarity=0.028 Sum_probs=161.2
Q ss_pred ccccccccccCCceEEccCCC--C----CCHHHHHHHHHcCCCEEEecceechhhhhhhhhhhcccccccccCCCCCcee
Q psy4398 20 ANANQANINYSNKIILAPMVR--M----NTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDGSVV 93 (306)
Q Consensus 20 ~~~~~~~l~l~n~i~lAPm~~--~----t~~~~r~~~~~~G~g~~~te~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 93 (306)
+++++.|.++++||++|||.+ . ++.+++..+++.|+++++++.. ..++..- .
T Consensus 62 ~st~i~G~~l~~Pv~iap~~~~~~~~~~~~~~~a~aa~~~G~~~~vss~s-~~~le~i-~-------------------- 119 (380)
T 1p4c_A 62 LQAEVLGKRQSMPLLIGPTGLNGALWPKGDLALARAATKAGIPFVLSTAS-NMSIEDL-A-------------------- 119 (380)
T ss_dssp CCEEETTEEESSSEEECCCSCGGGTSTTHHHHHHHHHHHHTCCEEECTTC-SSCHHHH-H--------------------
T ss_pred ceeEECCeecCCceEecCccccccCCCcHHHHHHHHHHHcCCCeecCccc-cCCHHHH-H--------------------
Confidence 889999999999999999964 3 5566888899999999999732 2222110 0
Q ss_pred eecCCCCCCceEEEecCCCHHHHHHHHHHHhc-CCCEEEE--------------ccCCCcc---ccc--------c--CC
Q psy4398 94 FRTCPREKNKIILQIGTADPERALEAAKKVEH-DVAAIDI--------------NMGCPKQ---FSL--------T--GG 145 (306)
Q Consensus 94 ~~~~~~~~~p~ivql~g~~~~~~~~aa~~~~~-g~d~vel--------------n~gcP~~---~~~--------~--~~ 145 (306)
.. .+.+...||.-...+...+..+++++ |++.++| |.+|+.+ +.. . ..
T Consensus 120 -~~---~~~~~~fQly~~~~~~~~~~i~~a~~aG~~al~vTvd~p~~g~r~~d~~~g~~~~~~~~~~~~~~~~~~~l~~~ 195 (380)
T 1p4c_A 120 -RQ---CDGDLWFQLYVIHREIAQGMVLKALHTGYTTLVLTTDVAVNGYRERDLHNRFKIPPFLTLKNFEGIDLGKMDKA 195 (380)
T ss_dssp -HH---CCSCEEEEECCSSHHHHHHHHHHHHHTTCCEEEEECSCSSCCCCHHHHHHTCCCCTTCCCGGGTTCCCSCCSST
T ss_pred -hc---cCCCeEEEEEechHHHHHHHHHHHHHcCCCEEEEeecCccccchhHHHhcCCCCccccCHHHhhhhhhhccCcc
Confidence 00 13478889974445556666677764 9999887 3456322 110 0 01
Q ss_pred ccccc---cC---ChHHHHHHHHHHHhcccccEEEEeccCCChHHHHHHHHHHHHcCCcEEEE--cccCCCCCCCCCCcH
Q psy4398 146 MGAAL---LS---TPDIACNILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGV--HGRTKAERPRHRNRI 217 (306)
Q Consensus 146 ~G~~l---~~---~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v--~~~~~~~~~~~p~~~ 217 (306)
.+..+ .. +|++..++++++++.+++||.+|.- . +.+.++.+.++|+|+|.+ |++. +...++.++
T Consensus 196 ~~~ala~~~~~~~~p~~~~~~i~~i~~~~~~Pv~vkgv--~----t~e~a~~a~~aGad~I~vs~~gg~--~~d~~~~~~ 267 (380)
T 1p4c_A 196 NLEMQAALMSRQMDASFNWEALRWLRDLWPHKLLVKGL--L----SAEDADRCIAEGADGVILSNHGGR--QLDCAISPM 267 (380)
T ss_dssp TTTTHHHHTSSCCCTTCCHHHHHHHHHHCCSEEEEEEE--C----CHHHHHHHHHTTCSEEEECCGGGT--SCTTCCCGG
T ss_pred cchHHHHHHHhhcCccccHHHHHHHHHhcCCCEEEEec--C----cHHHHHHHHHcCCCEEEEcCCCCC--cCCCCcCHH
Confidence 11111 12 6777789999999999999999953 2 356788999999999999 5443 223356689
Q ss_pred HHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhh---hhhccccCCCCC---------ch-H--HHHHHHHHhcCCC
Q psy4398 218 EMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLN---CAFLRNHYPVEK---------LP-K--TILYAHCKYKRFE 278 (306)
Q Consensus 218 ~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~---v~vGrall~~p~---------~~-~--~~l~~~~~~~g~~ 278 (306)
+.+.++++.+++|||++|||++.+|+.+++..| +++||+++.+.. .. . .+++.+|...|..
T Consensus 268 ~~l~~v~~~~~~pVia~GGI~~~~dv~kal~~GAdaV~iGr~~l~~~~~~g~~~v~~~~~~l~~el~~~m~~~G~~ 343 (380)
T 1p4c_A 268 EVLAQSVAKTGKPVLIDSGFRRGSDIVKALALGAEAVLLGRATLYGLAARGETGVDEVLTLLKADIDRTLAQIGCP 343 (380)
T ss_dssp GTHHHHHHHHCSCEEECSSCCSHHHHHHHHHTTCSCEEESHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHcCCeEEEECCCCCHHHHHHHHHhCCcHhhehHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 999999999999999999999999999999875 499999876531 11 1 1899999999965
No 43
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=99.75 E-value=2.8e-17 Score=152.43 Aligned_cols=194 Identities=12% Similarity=0.086 Sum_probs=140.0
Q ss_pred ccccccccccCCceEEccCCCCCCHHHHHH-HHHcCCCEEEecceechhhhhhhhhhhcccccccccCCCCCceeeecCC
Q psy4398 20 ANANQANINYSNKIILAPMVRMNTLPFRLL-ALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDGSVVFRTCP 98 (306)
Q Consensus 20 ~~~~~~~l~l~n~i~lAPm~~~t~~~~r~~-~~~~G~g~~~te~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 98 (306)
+++++.++++++||++|||.++++..++.. ++.+|+|++++++... .. .++ +..+
T Consensus 36 l~t~i~g~~l~~Pi~~a~mag~s~~~la~a~~~~gg~g~~~~~~~~~--~~-------~~i---------------~~~~ 91 (336)
T 1ypf_A 36 TTVTLGKHKFKLPVVPANMQTIIDERIATYLAENNYFYIMHRFQPEK--RI-------SFI---------------RDMQ 91 (336)
T ss_dssp CCEEETTEEESSSEEECSSTTTCCHHHHHHHHHTTCCCCCCCSSGGG--HH-------HHH---------------HHHH
T ss_pred ceEEECCEEecCcEEECCCCCCChHHHHHHHHhCCCEEEecCCCCHH--HH-------HHH---------------HHHH
Confidence 889999999999999999999999998664 5566789888775321 10 000 0011
Q ss_pred CCCCceEEEecCCCHHHHHHHHHHHhcC--CCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEe
Q psy4398 99 REKNKIILQIGTADPERALEAAKKVEHD--VAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKI 176 (306)
Q Consensus 99 ~~~~p~ivql~g~~~~~~~~aa~~~~~g--~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKi 176 (306)
+.+.|+.+|+ +..++++..+....+.| ++.|++|++. | ++....++++++++.++.|+.+|=
T Consensus 92 ~~g~~v~v~~-g~~~~~~~~a~~~~~~g~~~~~i~i~~~~----------G-----~~~~~~~~i~~lr~~~~~~~vi~G 155 (336)
T 1ypf_A 92 SRGLIASISV-GVKEDEYEFVQQLAAEHLTPEYITIDIAH----------G-----HSNAVINMIQHIKKHLPESFVIAG 155 (336)
T ss_dssp HTTCCCEEEE-CCSHHHHHHHHHHHHTTCCCSEEEEECSS----------C-----CSHHHHHHHHHHHHHCTTSEEEEE
T ss_pred hcCCeEEEeC-CCCHHHHHHHHHHHhcCCCCCEEEEECCC----------C-----CcHHHHHHHHHHHHhCCCCEEEEC
Confidence 1245788996 66777776654555567 9999998742 2 567788999999999854444442
Q ss_pred ccCCChHHHHHHHHHHHHcCCcEEEEc--ccCCC----CCCCCCC--cHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHH
Q psy4398 177 RVFHNEADTIALCKRLEACGIIAIGVH--GRTKA----ERPRHRN--RIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFS 248 (306)
Q Consensus 177 r~g~~~~~~~~~a~~l~~~G~d~i~v~--~~~~~----~~~~~p~--~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~ 248 (306)
.. . ..+.|+.++++|+|+|++. +.... ....+.+ .++.+.++++++++|||++|||++..|+.+++.
T Consensus 156 ~v-~----s~e~A~~a~~aGad~Ivvs~hgG~~~~~~~~~~~g~~g~~~~~l~~v~~~~~ipVIa~GGI~~g~Dv~kala 230 (336)
T 1ypf_A 156 NV-G----TPEAVRELENAGADATKVGIGPGKVCITKIKTGFGTGGWQLAALRWCAKAASKPIIADGGIRTNGDVAKSIR 230 (336)
T ss_dssp EE-C----SHHHHHHHHHHTCSEEEECSSCSTTCHHHHHHSCSSTTCHHHHHHHHHHTCSSCEEEESCCCSTHHHHHHHH
T ss_pred Cc-C----CHHHHHHHHHcCCCEEEEecCCCceeecccccCcCCchhHHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHH
Confidence 11 1 2578899999999999993 32210 0111112 688999999999999999999999999999998
Q ss_pred hh---hhhccccC
Q psy4398 249 LN---CAFLRNHY 258 (306)
Q Consensus 249 ~~---v~vGrall 258 (306)
.| |++||+++
T Consensus 231 lGAdaV~iGr~~l 243 (336)
T 1ypf_A 231 FGATMVMIGSLFA 243 (336)
T ss_dssp TTCSEEEESGGGT
T ss_pred cCCCEEEeChhhh
Confidence 75 49999998
No 44
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=99.74 E-value=9.4e-18 Score=156.44 Aligned_cols=235 Identities=12% Similarity=0.106 Sum_probs=146.0
Q ss_pred eeccc-ccccccccccCCceEEccCCCCCCHH------HHHHHHHcCCCEEEecceechhhhhhhhhhhcccccccccCC
Q psy4398 15 YVLDM-ANANQANINYSNKIILAPMVRMNTLP------FRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDP 87 (306)
Q Consensus 15 ~~~~~-~~~~~~~l~l~n~i~lAPm~~~t~~~------~r~~~~~~G~g~~~te~~~~~~~~~~~~~~~~~l~~~~~~~~ 87 (306)
.+.+. ++++++|.++++||++|||++.+..+ ++..|++.|.++.+.++...-.- +.. .+
T Consensus 70 ~~~~vd~st~i~g~~l~~Pi~iapMtgg~~~~~~in~~lA~~a~~~G~~~~vGs~~~~le~----~~~----~~------ 135 (365)
T 3sr7_A 70 DLAEIDLSTHFAGQDFDFPFYINAMTGGSQKGKEVNEKLAQVADTCGLLFVTGSYSTALKN----PDD----TS------ 135 (365)
T ss_dssp CGGGCCCCEEETTEEESSSEEEECC----CCCHHHHHHHHHHHHHHTCCEEC----------------------------
T ss_pred CcccccceEEECCEEccCceEeccccCCCcchhHHHHHHHHHHHHcCCCeecccccccccC----ccc----cc------
Confidence 33444 88899999999999999999877644 77778899999998887542110 000 00
Q ss_pred CCCceeeecCCCCCCceEEEecCCCHHHHHHHHHHHhc-CCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHh
Q psy4398 88 LDGSVVFRTCPREKNKIILQIGTADPERALEAAKKVEH-DVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLIS 166 (306)
Q Consensus 88 ~~~~~~~~~~~~~~~p~ivql~g~~~~~~~~aa~~~~~-g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~ 166 (306)
..+.+..| +.+++.+|+..... .++.+.++. ++|++++|+...+...... | ..+.+.+.+.++.+++
T Consensus 136 ---~~v~r~~P--~~~~ianig~~~~~--e~~~~~ve~~~adal~ihln~~qe~~~p~--G---d~~~~~~~~~I~~l~~ 203 (365)
T 3sr7_A 136 ---YQVKKSRP--HLLLATNIGLDKPY--QAGLQAVRDLQPLFLQVHINLMQELLMPE--G---EREFRSWKKHLSDYAK 203 (365)
T ss_dssp --------------CCEEEEEETTSCH--HHHHHHHHHHCCSCEEEEECHHHHHTSSS--S---CCCCHHHHHHHHHHHH
T ss_pred ---eEehhhCC--CCcEEEEeCCCCCH--HHHHHHHHhcCCCEEEEeccccccccCCC--C---CCcHHHHHHHHHHHHH
Confidence 00111112 46888999764332 244555544 8899999877433211111 1 1234457789999999
Q ss_pred cccccEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcccCCCCC---------------CCCCCcHHHHHHHHhhC-CCc
Q psy4398 167 NLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAER---------------PRHRNRIEMIRTLTQHL-KIP 230 (306)
Q Consensus 167 ~~~~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~---------------~~~p~~~~~v~~i~~~~-~ip 230 (306)
.+++||.+|. .|+. ...+.|+.+.++|+|+|++++...... ..+.+..+.+.+++... ++|
T Consensus 204 ~~~~PVivK~-vg~g--~s~e~A~~l~~aGad~I~V~g~GGt~~a~ie~~r~~~~~~~~~~g~pt~~~L~~v~~~~~~ip 280 (365)
T 3sr7_A 204 KLQLPFILKE-VGFG--MDVKTIQTAIDLGVKTVDISGRGGTSFAYIENRRGGNRSYLNQWGQTTAQVLLNAQPLMDKVE 280 (365)
T ss_dssp HCCSCEEEEE-CSSC--CCHHHHHHHHHHTCCEEECCCBC--------------CGGGTTCSCBHHHHHHHHGGGTTTSE
T ss_pred hhCCCEEEEE-CCCC--CCHHHHHHHHHcCCCEEEEeCCCCcccchhhccccccccccccccccHHHHHHHHHHhcCCCe
Confidence 9999999994 3322 134678889999999999976521110 01223445666665443 799
Q ss_pred EEEecCCCCHHHHHHHHHhhh---hhccccCC-----CC-C----chHH--HHHHHHHhcCCC
Q psy4398 231 VIANGGSKEIVDYGGVFSLNC---AFLRNHYP-----VE-K----LPKT--ILYAHCKYKRFE 278 (306)
Q Consensus 231 via~GGI~s~~~~~~~l~~~v---~vGrall~-----~p-~----~~~~--~l~~~~~~~g~~ 278 (306)
||++|||++..|+.+++..|+ ++||+++. ++ . +..+ +|+.+|...|++
T Consensus 281 via~GGI~~g~Dv~KaLalGAdaV~ig~~~l~a~~~~G~~~v~~~l~~l~~eL~~~m~~~G~~ 343 (365)
T 3sr7_A 281 ILASGGIRHPLDIIKALVLGAKAVGLSRTMLELVEQHSVHEVIAIVNGWKEDLRLIMCALNCQ 343 (365)
T ss_dssp EEECSSCCSHHHHHHHHHHTCSEEEESHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEEeCCCCCHHHHHHHHHcCCCEEEECHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 999999999999999998764 99998873 32 1 1122 999999999965
No 45
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=99.71 E-value=5.5e-16 Score=143.09 Aligned_cols=198 Identities=16% Similarity=0.196 Sum_probs=142.5
Q ss_pred ccccCCceEEccCCCCCCHHHHHHHHHcCC-CEEEecceechhhhhhhhhhhcccccccccCCCCCceeeecCCCCCCce
Q psy4398 26 NINYSNKIILAPMVRMNTLPFRLLALDYGA-DLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDGSVVFRTCPREKNKI 104 (306)
Q Consensus 26 ~l~l~n~i~lAPm~~~t~~~~r~~~~~~G~-g~~~te~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~ 104 (306)
.+.+++||++|||.+.++..++..+.+.|+ |++.+++.+++.+....+... ...+.|+
T Consensus 22 ~l~~~~Pii~apM~gvs~~~la~av~~aGglG~i~~~~~~~~~l~~~i~~i~---------------------~~~~~p~ 80 (326)
T 3bo9_A 22 LLEIEHPILMGGMAWAGTPTLAAAVSEAGGLGIIGSGAMKPDDLRKAISELR---------------------QKTDKPF 80 (326)
T ss_dssp HHTCSSSEEECCCTTTSCHHHHHHHHHTTSBEEEECTTCCHHHHHHHHHHHH---------------------TTCSSCE
T ss_pred hcCCCCCEEECCCCCCCCHHHHHHHHhCCCcEEeCCCCCCHHHHHHHHHHHH---------------------HhcCCCE
Confidence 467899999999999999999998777764 888777765544322111110 0123589
Q ss_pred EEEecCCCHHHHHHHHHHH-hcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEeccCCChH
Q psy4398 105 ILQIGTADPERALEAAKKV-EHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFHNEA 183 (306)
Q Consensus 105 ivql~g~~~~~~~~aa~~~-~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~ 183 (306)
.+|++..+++ +.+.++.+ +.|+|.|.+|++||. ++++.+++ .++++.+++.
T Consensus 81 gVnl~~~~~~-~~~~~~~~~~~g~d~V~l~~g~p~--------------------~~~~~l~~-~g~~v~~~v~------ 132 (326)
T 3bo9_A 81 GVNIILVSPW-ADDLVKVCIEEKVPVVTFGAGNPT--------------------KYIRELKE-NGTKVIPVVA------ 132 (326)
T ss_dssp EEEEETTSTT-HHHHHHHHHHTTCSEEEEESSCCH--------------------HHHHHHHH-TTCEEEEEES------
T ss_pred EEEEeccCCC-HHHHHHHHHHCCCCEEEECCCCcH--------------------HHHHHHHH-cCCcEEEEcC------
Confidence 9998875543 34444544 459999999988863 13455554 3788888876
Q ss_pred HHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHh---hhhhccccCCC
Q psy4398 184 DTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSL---NCAFLRNHYPV 260 (306)
Q Consensus 184 ~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~---~v~vGrall~~ 260 (306)
..+.++.+++.|+|+|.++++...+......+|+++.++++.+++|||+.|||+|.+++.++++. ++++||+++..
T Consensus 133 -s~~~a~~a~~~GaD~i~v~g~~~GG~~G~~~~~~ll~~i~~~~~iPviaaGGI~~~~dv~~al~~GA~gV~vGs~~~~~ 211 (326)
T 3bo9_A 133 -SDSLARMVERAGADAVIAEGMESGGHIGEVTTFVLVNKVSRSVNIPVIAAGGIADGRGMAAAFALGAEAVQMGTRFVAS 211 (326)
T ss_dssp -SHHHHHHHHHTTCSCEEEECTTSSEECCSSCHHHHHHHHHHHCSSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHTB
T ss_pred -CHHHHHHHHHcCCCEEEEECCCCCccCCCccHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHhCCCEEEechHHHcC
Confidence 34667788899999999988654332112458999999999999999999999999999999987 45999999987
Q ss_pred CCc-hHHHHHHHHH
Q psy4398 261 EKL-PKTILYAHCK 273 (306)
Q Consensus 261 p~~-~~~~l~~~~~ 273 (306)
+.. .....++.+.
T Consensus 212 ~e~~~~~~~k~~~~ 225 (326)
T 3bo9_A 212 VESDVHPVYKEKIV 225 (326)
T ss_dssp SSCCSCHHHHHHHH
T ss_pred ccccccHHHHHHHH
Confidence 743 2335555553
No 46
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=99.68 E-value=1.6e-15 Score=142.38 Aligned_cols=203 Identities=12% Similarity=0.160 Sum_probs=139.0
Q ss_pred cccccccccCCceEEccCCC-CCCHHHHHHHHHcCC-CEEEecceechhhhhhhhhhhcccccccccCCCCCceeeecCC
Q psy4398 21 NANQANINYSNKIILAPMVR-MNTLPFRLLALDYGA-DLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDGSVVFRTCP 98 (306)
Q Consensus 21 ~~~~~~l~l~n~i~lAPm~~-~t~~~~r~~~~~~G~-g~~~te~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 98 (306)
++++..+- +.||+.|||.+ +++..++..+.++|. |++.+++.+++.+....+.....
T Consensus 2 ~t~~~~~~-~~Pii~apMaggvs~~~la~av~~aGglG~i~~~~~s~~~l~~~i~~~~~~-------------------- 60 (369)
T 3bw2_A 2 SSALTDLF-PLPIVQAPMAGGVSVPQLAAAVCEAGGLGFLAAGYKTADGMYQEIKRLRGL-------------------- 60 (369)
T ss_dssp -CTTTTSS-SSSEEECCCTTTTSCHHHHHHHHHTTSBEEEECTTSCHHHHHHHHHHHHHH--------------------
T ss_pred CchhhhhC-cCCEEeCCCCCCCCcHHHHHHHHHCCCEEEcCCCCCCHHHHHHHHHHHHHh--------------------
Confidence 34455543 99999999995 999999988777764 88888888776554322221111
Q ss_pred CCCCceEEEecCCCH----------------------------------HHHHHHHHHHh-cCCCEEEEccCCCcccccc
Q psy4398 99 REKNKIILQIGTADP----------------------------------ERALEAAKKVE-HDVAAIDINMGCPKQFSLT 143 (306)
Q Consensus 99 ~~~~p~ivql~g~~~----------------------------------~~~~~aa~~~~-~g~d~veln~gcP~~~~~~ 143 (306)
.+.|+.+|++...+ +.+.+.++.+. .|+|.|.+|++||.
T Consensus 61 -~~~p~gVnl~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~V~~~~g~~~----- 134 (369)
T 3bw2_A 61 -TGRPFGVNVFMPQPELAESGAVEVYAHQLAGEAAWYETELGDPDGGRDDGYDAKLAVLLDDPVPVVSFHFGVPD----- 134 (369)
T ss_dssp -CCSCEEEEEECCCCCC---CHHHHHHHHTHHHHHHTTCCCCCSCSCSSTTHHHHHHHHHHSCCSEEEEESSCCC-----
T ss_pred -CCCCeEEEEecCCCCcccHHHHHHHHHHHHHHHHHcCCCcCcccccccccHHHHHHHHHhcCCCEEEEeCCCCc-----
Confidence 12356666554321 11344455454 49999999999874
Q ss_pred CCccccccCChHHHHHHHHHHHhcccccEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcccCCC---CCCC---C----
Q psy4398 144 GGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKA---ERPR---H---- 213 (306)
Q Consensus 144 ~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~---~~~~---~---- 213 (306)
.++++.+++ .++++.+++. ..+.++.+++.|+|+|.+++.... +... .
T Consensus 135 --------------~~~i~~~~~-~g~~v~~~v~-------t~~~a~~a~~~GaD~i~v~g~~~GGh~g~~~~~~~~~~~ 192 (369)
T 3bw2_A 135 --------------REVIARLRR-AGTLTLVTAT-------TPEEARAVEAAGADAVIAQGVEAGGHQGTHRDSSEDDGA 192 (369)
T ss_dssp --------------HHHHHHHHH-TTCEEEEEES-------SHHHHHHHHHTTCSEEEEECTTCSEECCCSSCCGGGTTC
T ss_pred --------------HHHHHHHHH-CCCeEEEECC-------CHHHHHHHHHcCCCEEEEeCCCcCCcCCCcccccccccc
Confidence 234556655 3788888875 234577888999999999765421 1110 0
Q ss_pred -CCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhh---hhhccccCCCCCchH-HHHHHHH
Q psy4398 214 -RNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLN---CAFLRNHYPVEKLPK-TILYAHC 272 (306)
Q Consensus 214 -p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~---v~vGrall~~p~~~~-~~l~~~~ 272 (306)
...+++++++++.+++|||+.|||.|.+++.++++.| +++||+++.+|+++. ...++.+
T Consensus 193 ~~~~~~~l~~i~~~~~iPViaaGGI~~~~~~~~~l~~GAd~V~vGs~~~~~~e~~~~~~~k~~i 256 (369)
T 3bw2_A 193 GIGLLSLLAQVREAVDIPVVAAGGIMRGGQIAAVLAAGADAAQLGTAFLATDESGAPGPHKRAL 256 (369)
T ss_dssp CCCHHHHHHHHHHHCSSCEEEESSCCSHHHHHHHHHTTCSEEEESHHHHTSTTCCCCHHHHHHT
T ss_pred cccHHHHHHHHHHhcCceEEEECCCCCHHHHHHHHHcCCCEEEEChHHhCCcccCccHHHHHHH
Confidence 1238999999999999999999999999999999874 599999999885543 3444433
No 47
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=99.67 E-value=3.2e-15 Score=138.07 Aligned_cols=198 Identities=11% Similarity=0.133 Sum_probs=138.0
Q ss_pred cccCCceEEccCCCCCCHHHHHHHHHcC-CCEEEeccee-chhhhhhhhhhhcccccccccCCCCCceeeecCCCCCCce
Q psy4398 27 INYSNKIILAPMVRMNTLPFRLLALDYG-ADLVYSEELV-DHKLVKTERKVNDLLNTIDFVDPLDGSVVFRTCPREKNKI 104 (306)
Q Consensus 27 l~l~n~i~lAPm~~~t~~~~r~~~~~~G-~g~~~te~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~ 104 (306)
+.++.||++|||.++++..++..+.+.| .|++.+++.. ++.+....+.... . .+.|+
T Consensus 12 l~~~~Pii~apM~gvs~~~la~av~~aGglG~i~~~~~~s~~~l~~~i~~i~~------------------~---~~~p~ 70 (328)
T 2gjl_A 12 FGVEHPIMQGGMQWVGRAEMAAAVANAGGLATLSALTQPSPEALAAEIARCRE------------------L---TDRPF 70 (328)
T ss_dssp HTCSSSEEECCCTTTCSHHHHHHHHHTTSBCEEETTTSSSHHHHHHHHHHHHH------------------H---CSSCC
T ss_pred hCCCCCEEECCCCCCCcHHHHHHHHHCCCeEEeCCCCCCCHHHHHHHHHHHHH------------------h---cCCCe
Confidence 3579999999999999999998877766 5888877654 3222211111000 0 13477
Q ss_pred EEEecCCC---HHHHHHHHHHHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEeccCC
Q psy4398 105 ILQIGTAD---PERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFH 180 (306)
Q Consensus 105 ivql~g~~---~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~ 180 (306)
.+|+..+. ..++.+.++.+. .|+|.|.+|+++|. ++++.+++. ++++.+++.
T Consensus 71 ~v~l~v~~~~~~~~~~~~~~~~~~~g~d~V~~~~g~p~--------------------~~~~~l~~~-gi~vi~~v~--- 126 (328)
T 2gjl_A 71 GVNLTLLPTQKPVPYAEYRAAIIEAGIRVVETAGNDPG--------------------EHIAEFRRH-GVKVIHKCT--- 126 (328)
T ss_dssp EEEEEECCCSSCCCHHHHHHHHHHTTCCEEEEEESCCH--------------------HHHHHHHHT-TCEEEEEES---
T ss_pred EEEEeccccccCccHHHHHHHHHhcCCCEEEEcCCCcH--------------------HHHHHHHHc-CCCEEeeCC---
Confidence 88877651 123555555554 59999999987752 345666664 788887765
Q ss_pred ChHHHHHHHHHHHHcCCcEEEEcccCCCCC--CCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHh---hhhhcc
Q psy4398 181 NEADTIALCKRLEACGIIAIGVHGRTKAER--PRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSL---NCAFLR 255 (306)
Q Consensus 181 ~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~--~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~---~v~vGr 255 (306)
..+.++.+++.|+|+|.+++....+. ...+.+|+++.++++.+++|||+.|||.+.+++.++++. ++++||
T Consensus 127 ----t~~~a~~~~~~GaD~i~v~g~~~GG~~G~~~~~~~~~l~~v~~~~~iPviaaGGI~~~~~v~~al~~GAdgV~vGs 202 (328)
T 2gjl_A 127 ----AVRHALKAERLGVDAVSIDGFECAGHPGEDDIPGLVLLPAAANRLRVPIIASGGFADGRGLVAALALGADAINMGT 202 (328)
T ss_dssp ----SHHHHHHHHHTTCSEEEEECTTCSBCCCSSCCCHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHHHHTCSEEEESH
T ss_pred ----CHHHHHHHHHcCCCEEEEECCCCCcCCCCccccHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCCEEEECH
Confidence 24556778899999999987654321 112358899999999999999999999999999999886 459999
Q ss_pred ccCCCCCc-hHHHHHHHHH
Q psy4398 256 NHYPVEKL-PKTILYAHCK 273 (306)
Q Consensus 256 all~~p~~-~~~~l~~~~~ 273 (306)
+++..+.. ....+++.+.
T Consensus 203 ~~~~~~e~~~~~~~k~~~~ 221 (328)
T 2gjl_A 203 RFLATRECPIHPAVKAAIR 221 (328)
T ss_dssp HHHTSSSSCSCHHHHHHHH
T ss_pred HHHcCccccccHHHHHHHH
Confidence 99988742 2234445443
No 48
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=99.66 E-value=1.9e-15 Score=143.47 Aligned_cols=221 Identities=12% Similarity=0.082 Sum_probs=138.1
Q ss_pred cccccc-ccccCCceEEccCCCCCCHHHHHHHHHcC-CCEEEecceechhhhhhhhhhh------cccccccc-------
Q psy4398 20 ANANQA-NINYSNKIILAPMVRMNTLPFRLLALDYG-ADLVYSEELVDHKLVKTERKVN------DLLNTIDF------- 84 (306)
Q Consensus 20 ~~~~~~-~l~l~n~i~lAPm~~~t~~~~r~~~~~~G-~g~~~te~~~~~~~~~~~~~~~------~~l~~~~~------- 84 (306)
+++++. ++++++||++|||.+.++..++..+.+.| .|.+. .+.+.+.......... ++++...+
T Consensus 31 lst~l~~g~~l~~Pii~Apm~~~~~~ela~a~a~aGglg~i~-~~~s~e~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l 109 (404)
T 1eep_A 31 LKTQLTKNISLNIPFLSSAMDTVTESQMAIAIAKEGGIGIIH-KNMSIEAQRKEIEKVKTYKFQKTINTNGDTNEQKPEI 109 (404)
T ss_dssp CCEESSSSCEESSSEEECCCTTTCSHHHHHHHHHHTSEEEEC-SSSCHHHHHHHHHHHHTCC------------------
T ss_pred cceeccCCcccCCCEEeCCCCCCCCHHHHHHHHHCCCEEEEC-CCCCHHHHHHHHHHHHhhccCCCceeccccccccccc
Confidence 788888 99999999999999999999888765655 45554 5555554432211100 01110000
Q ss_pred c----CCCCC---ceee--ec----CC--CCCCceEEEecCCCHHHHHHHHHHHhcCCCEEEEccCCCccccccCCcccc
Q psy4398 85 V----DPLDG---SVVF--RT----CP--REKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAA 149 (306)
Q Consensus 85 ~----~~~~~---~~~~--~~----~~--~~~~p~ivql~g~~~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~ 149 (306)
. +.+.. +... .. +. +...++++++.. +++....+...++.|+|.|+||.++ |
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~i~~-~~~~~~~a~~~~~~G~d~i~i~~~~----------g-- 176 (404)
T 1eep_A 110 FTAKQHLEKSDAYKNAEHKEDFPNACKDLNNKLRVGAAVSI-DIDTIERVEELVKAHVDILVIDSAH----------G-- 176 (404)
T ss_dssp --------------------CCTTCCBCTTSCBCCEEEECS-CTTHHHHHHHHHHTTCSEEEECCSC----------C--
T ss_pred cccCCCCCHHHHHHHHHHhhhcchhhhhcccCceEEEEeCC-ChhHHHHHHHHHHCCCCEEEEeCCC----------C--
Confidence 0 00000 0000 00 11 112357888865 3333333333345699999998654 1
Q ss_pred ccCChHHHHHHHHHHHhcc-cccEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcccCCC------CCCCCCCcHHHHHH
Q psy4398 150 LLSTPDIACNILTTLISNL-SIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKA------ERPRHRNRIEMIRT 222 (306)
Q Consensus 150 l~~~~~~~~eiv~~v~~~~-~~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~------~~~~~p~~~~~v~~ 222 (306)
+++.+.++++++++.+ ++||.++-- . ..+.++.++++|+|+|.+...... ....+...++.+..
T Consensus 177 ---~~~~~~e~i~~ir~~~~~~pviv~~v--~----~~~~a~~a~~~Gad~I~vg~~~G~~~~~~~~~~~g~p~~~~l~~ 247 (404)
T 1eep_A 177 ---HSTRIIELIKKIKTKYPNLDLIAGNI--V----TKEAALDLISVGADCLKVGIGPGSICTTRIVAGVGVPQITAICD 247 (404)
T ss_dssp ---SSHHHHHHHHHHHHHCTTCEEEEEEE--C----SHHHHHHHHTTTCSEEEECSSCSTTSHHHHHHCCCCCHHHHHHH
T ss_pred ---ChHHHHHHHHHHHHHCCCCeEEEcCC--C----cHHHHHHHHhcCCCEEEECCCCCcCcCccccCCCCcchHHHHHH
Confidence 3578889999999988 789998432 2 257788899999999999321100 00112235666666
Q ss_pred HHh---hCCCcEEEecCCCCHHHHHHHHHhh---hhhccccCCCCCc
Q psy4398 223 LTQ---HLKIPVIANGGSKEIVDYGGVFSLN---CAFLRNHYPVEKL 263 (306)
Q Consensus 223 i~~---~~~ipvia~GGI~s~~~~~~~l~~~---v~vGrall~~p~~ 263 (306)
+++ .+++|||++|||++.+|+.+++..| +++||+++..|..
T Consensus 248 v~~~~~~~~ipVia~GGI~~~~d~~~ala~GAd~V~iG~~~l~~~e~ 294 (404)
T 1eep_A 248 VYEACNNTNICIIADGGIRFSGDVVKAIAAGADSVMIGNLFAGTKES 294 (404)
T ss_dssp HHHHHTTSSCEEEEESCCCSHHHHHHHHHHTCSEEEECHHHHTBTTS
T ss_pred HHHHHhhcCceEEEECCCCCHHHHHHHHHcCCCHHhhCHHHhcCCCC
Confidence 655 5689999999999999999999875 4999999876644
No 49
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=99.59 E-value=5e-14 Score=131.46 Aligned_cols=195 Identities=19% Similarity=0.144 Sum_probs=133.9
Q ss_pred cccccc-ccccCCceEEccCCCCCCHHHHHH-HHHcCCCEEEecceechhhhhhhhhhhcccccccccCCCCCceeeecC
Q psy4398 20 ANANQA-NINYSNKIILAPMVRMNTLPFRLL-ALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDGSVVFRTC 97 (306)
Q Consensus 20 ~~~~~~-~l~l~n~i~lAPm~~~t~~~~r~~-~~~~G~g~~~te~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 97 (306)
+++++. +++++.||+.|||.++++..++.. ++.+|.|++.. ..+++......+...
T Consensus 34 l~t~l~~~~~l~~Pii~apM~~vt~~~lA~avA~~GGlgii~~-~~s~e~~~~~I~~vk--------------------- 91 (361)
T 3khj_A 34 LETKLTKNVSLKIPLISSAMDTVTEHLMAVGMARLGGIGIIHK-NMDMESQVNEVLKVK--------------------- 91 (361)
T ss_dssp CCEESSSSCEESSSEEECSSTTTCSHHHHHHHHHTTCEEEECS-SSCHHHHHHHHHHHH---------------------
T ss_pred CceecccccccCCCEEeecCCCCCcHHHHHHHHHcCCCeEEec-CCCHHHHHHHHHHHH---------------------
Confidence 666776 789999999999999999998874 55667777653 333322221111100
Q ss_pred CCCCCceEEEecCCCHHHHHHHHH-HHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEe
Q psy4398 98 PREKNKIILQIGTADPERALEAAK-KVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKI 176 (306)
Q Consensus 98 ~~~~~p~ivql~g~~~~~~~~aa~-~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKi 176 (306)
.....|+.++++..+ .+.++ .+++|+|.|.||.+. .+++.+.+.++.+++.++.||.++.
T Consensus 92 ~~~~~pvga~ig~~~----~e~a~~l~eaGad~I~ld~a~---------------G~~~~~~~~i~~i~~~~~~~Vivg~ 152 (361)
T 3khj_A 92 NSGGLRVGAAIGVNE----IERAKLLVEAGVDVIVLDSAH---------------GHSLNIIRTLKEIKSKMNIDVIVGN 152 (361)
T ss_dssp HTTCCCCEEEECTTC----HHHHHHHHHTTCSEEEECCSC---------------CSBHHHHHHHHHHHHHCCCEEEEEE
T ss_pred hccCceEEEEeCCCH----HHHHHHHHHcCcCeEEEeCCC---------------CCcHHHHHHHHHHHHhcCCcEEEcc
Confidence 012357889986655 33334 345699999998653 1356777889999888889999864
Q ss_pred ccCCChHHHHHHHHHHHHcCCcEEEEcccC--CCC----CCCCCCcHHHHHHHHh---hCCCcEEEecCCCCHHHHHHHH
Q psy4398 177 RVFHNEADTIALCKRLEACGIIAIGVHGRT--KAE----RPRHRNRIEMIRTLTQ---HLKIPVIANGGSKEIVDYGGVF 247 (306)
Q Consensus 177 r~g~~~~~~~~~a~~l~~~G~d~i~v~~~~--~~~----~~~~p~~~~~v~~i~~---~~~ipvia~GGI~s~~~~~~~l 247 (306)
- . +.+.++.+.++|+|+|.+.... ... ...+.+.+..+.++++ .+++|||+.|||.+.+++.+++
T Consensus 153 v--~----t~e~A~~l~~aGaD~I~VG~~~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIA~GGI~~~~di~kal 226 (361)
T 3khj_A 153 V--V----TEEATKELIENGADGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKAL 226 (361)
T ss_dssp E--C----SHHHHHHHHHTTCSEEEECSSCCTTCCHHHHTCBCCCHHHHHHHHHHHHHHHTCCEEEESCCCSHHHHHHHH
T ss_pred C--C----CHHHHHHHHHcCcCEEEEecCCCcCCCcccccCCCCCcHHHHHHHHHHHhhcCCeEEEECCCCCHHHHHHHH
Confidence 4 2 3566788899999999983111 000 1122346666666644 4589999999999999999999
Q ss_pred Hhh---hhhccccCCCC
Q psy4398 248 SLN---CAFLRNHYPVE 261 (306)
Q Consensus 248 ~~~---v~vGrall~~p 261 (306)
..| +++|++++..+
T Consensus 227 a~GAd~V~vGs~~~~t~ 243 (361)
T 3khj_A 227 AVGASSVMIGSILAGTE 243 (361)
T ss_dssp HHTCSEEEESTTTTTBT
T ss_pred HcCCCEEEEChhhhcCC
Confidence 875 49999998754
No 50
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=99.58 E-value=1e-14 Score=127.70 Aligned_cols=117 Identities=15% Similarity=0.172 Sum_probs=93.5
Q ss_pred HhcCCCEEE--EccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEe---ccCCChHHHHHHHHHHHHcCC
Q psy4398 123 VEHDVAAID--INMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKI---RVFHNEADTIALCKRLEACGI 197 (306)
Q Consensus 123 ~~~g~d~ve--ln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKi---r~g~~~~~~~~~a~~l~~~G~ 197 (306)
++.|+|.|| +|++|- +.+ +.+.+.+.++++++.++ |+.+|+ +.+++.++..++++.++++|+
T Consensus 80 ~~~Gad~Id~viN~g~~----~~~--------~~~~~~~~i~~v~~a~~-pv~vKvi~e~~~l~~~~~~~~a~~a~eaGa 146 (225)
T 1mzh_A 80 VRDGAQELDIVWNLSAF----KSE--------KYDFVVEELKEIFRETP-SAVHKVIVETPYLNEEEIKKAVEICIEAGA 146 (225)
T ss_dssp HHTTCSEEEEECCHHHH----HTT--------CHHHHHHHHHHHHHTCT-TSEEEEECCGGGCCHHHHHHHHHHHHHHTC
T ss_pred HHcCCCEEEEEecHHHH----hcC--------ChHHHHHHHHHHHHHhc-CceEEEEEeCCCCCHHHHHHHHHHHHHhCC
Confidence 346999999 798881 111 34566777999999888 999999 777888889999999999999
Q ss_pred cEEEEcccCCCCCCCCCCcHHHHHHHHhhC--CCcEEEecCCCCHHHHHHHHHhhh-hhccc
Q psy4398 198 IAIGVHGRTKAERPRHRNRIEMIRTLTQHL--KIPVIANGGSKEIVDYGGVFSLNC-AFLRN 256 (306)
Q Consensus 198 d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~--~ipvia~GGI~s~~~~~~~l~~~v-~vGra 256 (306)
|+|..+ .+.+.+..+++.++.+++.+ ++||+++|||+|.+++.++++.|+ .+|..
T Consensus 147 d~I~ts----tg~~~gga~~~~i~~v~~~v~~~ipVia~GGI~t~~da~~~l~aGA~~iG~s 204 (225)
T 1mzh_A 147 DFIKTS----TGFAPRGTTLEEVRLIKSSAKGRIKVKASGGIRDLETAISMIEAGADRIGTS 204 (225)
T ss_dssp SEEECC----CSCSSSCCCHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTTCSEEEES
T ss_pred CEEEEC----CCCCCCCCCHHHHHHHHHHhCCCCcEEEECCCCCHHHHHHHHHhCchHHHHc
Confidence 999432 23334456899999999988 799999999999999999998776 44544
No 51
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=99.58 E-value=1.2e-13 Score=128.34 Aligned_cols=192 Identities=14% Similarity=0.090 Sum_probs=130.7
Q ss_pred ccccccccccCCceEEccCCCCCCHHHHHHHHHcCCCEEEecceechhhhhhhhhhhcccccccccCCCCCceeeecCCC
Q psy4398 20 ANANQANINYSNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDGSVVFRTCPR 99 (306)
Q Consensus 20 ~~~~~~~l~l~n~i~lAPm~~~t~~~~r~~~~~~G~g~~~te~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 99 (306)
+++++.+++++.||+.|||..+++..++..+.+.|.-.++....+.+......+.
T Consensus 32 ~~t~l~g~~l~~Pii~ApM~~vte~~lA~A~a~~Gg~gvi~~~~s~ee~~~~i~~------------------------- 86 (361)
T 3r2g_A 32 STDRLGKLTLNLPVISANMDTITESNMANFMHSKGAMGALHRFMTIEENIQEFKK------------------------- 86 (361)
T ss_dssp EECTTSSCEESSCEEECCSTTTCSHHHHHHHHHTTCEEBCCSCSCHHHHHHHHHT-------------------------
T ss_pred eeEEECCEEcCCCEEECCCCCchHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHhh-------------------------
Confidence 4558899999999999999999999999987777754444554443333221110
Q ss_pred CCCceEEEecCCCHHHHHHHHHHH-hcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc-cccEEEEec
Q psy4398 100 EKNKIILQIGTADPERALEAAKKV-EHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL-SIPVSCKIR 177 (306)
Q Consensus 100 ~~~p~ivql~g~~~~~~~~aa~~~-~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir 177 (306)
....+.+.+ +.. +...+.++++ ++|+|.|+++..+.+ ++.+.++++.+++.. ++||.+|--
T Consensus 87 ~~~~~~~~~-g~~-~~~~e~~~~a~~aGvdvI~id~a~G~---------------~~~~~e~I~~ir~~~~~~~Vi~G~V 149 (361)
T 3r2g_A 87 CKGPVFVSV-GCT-ENELQRAEALRDAGADFFCVDVAHAH---------------AKYVGKTLKSLRQLLGSRCIMAGNV 149 (361)
T ss_dssp CCSCCBEEE-CSS-HHHHHHHHHHHHTTCCEEEEECSCCS---------------SHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred cceEEEEEc-CCC-HHHHHHHHHHHHcCCCEEEEeCCCCC---------------cHhHHHHHHHHHHhcCCCeEEEcCc
Confidence 011222333 223 3445556655 469999999876532 245678899999876 789999732
Q ss_pred cCCChHHHHHHHHHHHHcCCcEEEEcccCCCC------CCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhh-
Q psy4398 178 VFHNEADTIALCKRLEACGIIAIGVHGRTKAE------RPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLN- 250 (306)
Q Consensus 178 ~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~------~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~- 250 (306)
. +.+.|+.+.++|+|+|.+....... ...+.+.++.+.++++... |||+.|||++..++.++++.|
T Consensus 150 --~----T~e~A~~a~~aGaD~I~Vg~g~G~~~~tr~~~g~g~p~l~aI~~~~~~~~-PVIAdGGI~~~~di~kALa~GA 222 (361)
T 3r2g_A 150 --A----TYAGADYLASCGADIIKAGIGGGSVCSTRIKTGFGVPMLTCIQDCSRADR-SIVADGGIKTSGDIVKALAFGA 222 (361)
T ss_dssp --C----SHHHHHHHHHTTCSEEEECCSSSSCHHHHHHHCCCCCHHHHHHHHTTSSS-EEEEESCCCSHHHHHHHHHTTC
T ss_pred --C----CHHHHHHHHHcCCCEEEEcCCCCcCccccccCCccHHHHHHHHHHHHhCC-CEEEECCCCCHHHHHHHHHcCC
Confidence 1 2456888999999999983211000 0112236777777777665 999999999999999999986
Q ss_pred --hhhccccCCC
Q psy4398 251 --CAFLRNHYPV 260 (306)
Q Consensus 251 --v~vGrall~~ 260 (306)
|++||+++.-
T Consensus 223 d~V~iGr~f~~t 234 (361)
T 3r2g_A 223 DFVMIGGMLAGS 234 (361)
T ss_dssp SEEEESGGGTTB
T ss_pred CEEEEChHHhCC
Confidence 4999999864
No 52
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=99.54 E-value=1.2e-14 Score=129.84 Aligned_cols=154 Identities=10% Similarity=0.055 Sum_probs=116.3
Q ss_pred eEEEecCCCHHHHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCC-----hHHHHHHHHHHH-hcccccEEEEec
Q psy4398 104 IILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLST-----PDIACNILTTLI-SNLSIPVSCKIR 177 (306)
Q Consensus 104 ~ivql~g~~~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~-----~~~~~eiv~~v~-~~~~~pv~vKir 177 (306)
+-+|++|.-.. . ++.+.+ .|+|.|-+ |+.++++ |+++.++++++. +.+-+++++|.+
T Consensus 77 ~pv~vgGGir~-~-~~~~~l-~Ga~~Vii--------------gs~a~~~~g~~~p~~~~~~~~~~g~~~ivv~iD~k~~ 139 (260)
T 2agk_A 77 QFLQVGGGIND-T-NCLEWL-KWASKVIV--------------TSWLFTKEGHFQLKRLERLTELCGKDRIVVDLSCRKT 139 (260)
T ss_dssp TTSEEESSCCT-T-THHHHT-TTCSCEEE--------------CGGGBCTTCCBCHHHHHHHHHHHCGGGEEEEEEEEEE
T ss_pred ceEEEeCCCCH-H-HHHHHh-cCCCEEEE--------------CcHHHhhcCCCCHHHHHHHHHHhCcCcEEEEEEeeec
Confidence 44667666543 3 777777 99998876 4566677 999999999997 666667777633
Q ss_pred ---------cCCChH---HHH-HHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhC----CCcEEEecCCCCH
Q psy4398 178 ---------VFHNEA---DTI-ALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHL----KIPVIANGGSKEI 240 (306)
Q Consensus 178 ---------~g~~~~---~~~-~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~----~ipvia~GGI~s~ 240 (306)
.||... +.. ++++.+++. ++.|.+|++++++.+.++ +|++++++++.+ ++|||++|||.|+
T Consensus 140 ~~~g~~V~~~gw~~~t~~~~~~e~a~~~~~~-a~~il~t~i~~dG~~~G~-d~eli~~l~~~~~~~~~iPVIasGGi~s~ 217 (260)
T 2agk_A 140 QDGRWIVAMNKWQTLTDLELNADTFRELRKY-TNEFLIHAADVEGLCGGI-DELLVSKLFEWTKDYDDLKIVYAGGAKSV 217 (260)
T ss_dssp ETTEEEEEETTTTEEEEEEESHHHHHHHTTT-CSEEEEEC-------CCC-CHHHHHHHHHHHTTCSSCEEEEESCCCCT
T ss_pred CCCceEEEEcCCccccCccHHHHHHHHHHHh-cCEEEEEeeccccCcCCC-CHHHHHHHHHhhcccCCceEEEeCCCCCH
Confidence 145432 356 999999999 999999999999999887 999999999999 9999999999999
Q ss_pred HHHHHHHHh--h---hhhcccc--CCCCCchHHHHHHHHHhcC
Q psy4398 241 VDYGGVFSL--N---CAFLRNH--YPVEKLPKTILYAHCKYKR 276 (306)
Q Consensus 241 ~~~~~~l~~--~---v~vGral--l~~p~~~~~~l~~~~~~~g 276 (306)
+|++++++. + +++||++ |.++-+...++.+|+++.|
T Consensus 218 ed~~~l~~~~~G~~gvivg~al~l~~g~~~~~~~~~~~~~~~~ 260 (260)
T 2agk_A 218 DDLKLVDELSHGKVDLTFGSSLDIFGGNLVKFEDCCRWNEKQG 260 (260)
T ss_dssp HHHHHHHHHHTTCEEEECCTTBGGGTCSSBCHHHHHHHHHHHC
T ss_pred HHHHHHHHhcCCCCEEEeeCCHHHcCCCCCCHHHHHHHHHhcC
Confidence 999999976 4 4999997 8887344445667877654
No 53
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=99.54 E-value=4.6e-14 Score=130.58 Aligned_cols=228 Identities=15% Similarity=0.077 Sum_probs=156.3
Q ss_pred ccccccccccCCceEEccCCC----CCC--HHHHHHHHHcCCCEEEecceechhhhhhhhhhhcccccccccCCCCCcee
Q psy4398 20 ANANQANINYSNKIILAPMVR----MNT--LPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDGSVV 93 (306)
Q Consensus 20 ~~~~~~~l~l~n~i~lAPm~~----~t~--~~~r~~~~~~G~g~~~te~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 93 (306)
+++++-|.+++-||++||+.. ..+ ......+.+.|.-.+++-+.+ .++.. +
T Consensus 59 ~~t~llG~~~~~P~~iaP~g~~~l~~~~ge~~~araa~~~gi~~~lSt~ss-~s~e~----------------------v 115 (352)
T 3sgz_A 59 TRTTIQGQEISAPICISPTAFHSIAWPDGEKSTARAAQEANICYVISSYAS-YSLED----------------------I 115 (352)
T ss_dssp CCEEETTEEESSSEEECCCSCGGGTCTTHHHHHHHHHHHHTCEEEECTTCS-SCHHH----------------------H
T ss_pred CceEECCcccCCcceechHHHHHhcCccHHHHHHHHHHHcCCCeEeCCCCC-CCHHH----------------------H
Confidence 889999999999999999873 122 224444566676555543321 11110 0
Q ss_pred eecCCCCCCceEEEec-CCCHHHHHHHHHHHhc-CCCEEEEccCCCccccc-cC--------------Cc--------cc
Q psy4398 94 FRTCPREKNKIILQIG-TADPERALEAAKKVEH-DVAAIDINMGCPKQFSL-TG--------------GM--------GA 148 (306)
Q Consensus 94 ~~~~~~~~~p~ivql~-g~~~~~~~~aa~~~~~-g~d~veln~gcP~~~~~-~~--------------~~--------G~ 148 (306)
.... .+.|...||. ..+.+...+..+++++ ||.+|-+..-.|..-.| +| .+ ++
T Consensus 116 ~~~~--~~~~~wfQlY~~~d~~~~~~l~~ra~~aG~~alvlTvD~p~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~ 193 (352)
T 3sgz_A 116 VAAA--PEGFRWFQLYMKSDWDFNKQMVQRAEALGFKALVITIDTPVLGNRRRDKRNQLNLEANILKAALRALKEEKPTQ 193 (352)
T ss_dssp HHHS--TTCEEEEECCCCSCHHHHHHHHHHHHHTTCCCEEEECSCSSCCCCHHHHHHHHHSCHHHHTTCC----------
T ss_pred HHhc--cCccceeccccCCCHHHHHHHHHHHHHcCCCEEEEEeCCCCCCcchhhhhcCCCCCcccchhhhcccccccccc
Confidence 1111 1347888985 3466666777788875 99999988776642111 00 00 00
Q ss_pred c---ccCChHHHHHHHHHHHhcccccEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHh
Q psy4398 149 A---LLSTPDIACNILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQ 225 (306)
Q Consensus 149 ~---l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~ 225 (306)
. ...++.+.-+.++.+++.++.||.+|.. .+ .+.|+.++++|+|+|++++....+...++..++.+.++++
T Consensus 194 ~~~~~~~d~~~~w~~i~~lr~~~~~PvivK~v--~~----~e~A~~a~~~GaD~I~vsn~GG~~~d~~~~~~~~L~~i~~ 267 (352)
T 3sgz_A 194 SVPVLFPKASFCWNDLSLLQSITRLPIILKGI--LT----KEDAELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVA 267 (352)
T ss_dssp -----CCCTTCCHHHHHHHHHHCCSCEEEEEE--CS----HHHHHHHHHTTCSEEEECCGGGTSSCSSCCHHHHHHHHHH
T ss_pred hhhhhccCCCCCHHHHHHHHHhcCCCEEEEec--Cc----HHHHHHHHHcCCCEEEEeCCCCCccCCCccHHHHHHHHHH
Confidence 0 1234666678899999999999999987 33 4668899999999999965432233345778999999999
Q ss_pred hC--CCcEEEecCCCCHHHHHHHHHhhh---hhccccCCC-----C-C---ch-H--HHHHHHHHhcCCC
Q psy4398 226 HL--KIPVIANGGSKEIVDYGGVFSLNC---AFLRNHYPV-----E-K---LP-K--TILYAHCKYKRFE 278 (306)
Q Consensus 226 ~~--~ipvia~GGI~s~~~~~~~l~~~v---~vGrall~~-----p-~---~~-~--~~l~~~~~~~g~~ 278 (306)
.+ ++|||++|||++..|+.+++..|+ ++||+++.. + - .. . .+|+.+|...|++
T Consensus 268 av~~~ipVia~GGI~~g~Dv~kaLalGA~aV~iGr~~l~~l~~~G~~gv~~~l~~l~~el~~~m~~~G~~ 337 (352)
T 3sgz_A 268 AVKGKIEVYMDGGVRTGTDVLKALALGARCIFLGRPILWGLACKGEDGVKEVLDILTAELHRCMTLSGCQ 337 (352)
T ss_dssp HHTTSSEEEEESSCCSHHHHHHHHHTTCSEEEESHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred HhCCCCeEEEECCCCCHHHHHHHHHcCCCEEEECHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 88 799999999999999999998754 999998743 2 1 11 1 2899999999954
No 54
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=99.49 E-value=1.1e-13 Score=130.84 Aligned_cols=221 Identities=13% Similarity=0.087 Sum_probs=135.1
Q ss_pred ccccccccccCCceEEccCCCCCCHHHHHHHHHcC-CCEEEecceec-----hh----hhhhhhhh-----hcccccccc
Q psy4398 20 ANANQANINYSNKIILAPMVRMNTLPFRLLALDYG-ADLVYSEELVD-----HK----LVKTERKV-----NDLLNTIDF 84 (306)
Q Consensus 20 ~~~~~~~l~l~n~i~lAPm~~~t~~~~r~~~~~~G-~g~~~te~~~~-----~~----~~~~~~~~-----~~~l~~~~~ 84 (306)
+++++.++++++||++|||.+.++..++..+.+.| .|.+.|+|... .. +....... .+.+.. .+
T Consensus 57 lst~l~g~~l~~Pii~Apm~g~~~~~~a~a~a~~G~~gvl~~~~~~~~~~~~~~~~eeia~~~~~~d~~~g~~~~~q-~~ 135 (393)
T 2qr6_A 57 TTWHIDAYKFDLPFMNHPSDALASPEFVIEMGKQGGLGVINAEGLWGRHADLDEAIAKVIAAYEEGDQAAATRTLQE-LH 135 (393)
T ss_dssp CCEEETTEEESSSEEECCCTTTCCHHHHHHHHHTTSBCEEETTSSTTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHH-HH
T ss_pred ceeEEcccccCCCeEeCCCCCcccHHHHHHHHHcCCcEEEEecceecccCCchhHHHHHHHHHHhcCCCccchhhhh-cc
Confidence 88899999999999999999999998877665655 58888866321 11 11000000 000000 01
Q ss_pred cCC---CCCceeeecCCCCCCceEEEecCCCHHHHHHHHHHH-hcCCCEEEEccCCCccccccCCccccccCChH-HHHH
Q psy4398 85 VDP---LDGSVVFRTCPREKNKIILQIGTADPERALEAAKKV-EHDVAAIDINMGCPKQFSLTGGMGAALLSTPD-IACN 159 (306)
Q Consensus 85 ~~~---~~~~~~~~~~~~~~~p~ivql~g~~~~~~~~aa~~~-~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~-~~~e 159 (306)
..+ .....+.+...+.+.++++.+.+.+..+ .++.+ +.|+|.+.+|. .|.. ..+++ ++ ...+
T Consensus 136 ~~~~d~~~~~~~i~~~~~~g~~v~~~v~~~~~~e---~a~~~~~agad~i~i~~-~~~~----~~~~~-----~~~~~~~ 202 (393)
T 2qr6_A 136 AAPLDTELLSERIAQVRDSGEIVAVRVSPQNVRE---IAPIVIKAGADLLVIQG-TLIS----AEHVN-----TGGEALN 202 (393)
T ss_dssp HSCCCHHHHHHHHHHHHHTTSCCEEEECTTTHHH---HHHHHHHTTCSEEEEEC-SSCC----SSCCC-----C-----C
T ss_pred cccCCHHHHHHHHHHHhhcCCeEEEEeCCccHHH---HHHHHHHCCCCEEEEeC-Cccc----cccCC-----CcccHHH
Confidence 111 0011122223334778888887654433 33444 35999999873 2210 11221 11 1223
Q ss_pred HHHHHHhcccccEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcccCCCC---CCCCCCcHHHHHHHHhh-------CC-
Q psy4398 160 ILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAE---RPRHRNRIEMIRTLTQH-------LK- 228 (306)
Q Consensus 160 iv~~v~~~~~~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~---~~~~p~~~~~v~~i~~~-------~~- 228 (306)
+..+++.+++||.+|-- .+. +.++.+.++|+|+|.+....... ...+++.++.+.++++. ++
T Consensus 203 -i~~l~~~~~~pvi~ggi--~t~----e~a~~~~~~Gad~i~vg~Gg~~~~~~~~~g~~~~~~l~~v~~~~~~~~~~~~~ 275 (393)
T 2qr6_A 203 -LKEFIGSLDVPVIAGGV--NDY----TTALHMMRTGAVGIIVGGGENTNSLALGMEVSMATAIADVAAARRDYLDETGG 275 (393)
T ss_dssp -HHHHHHHCSSCEEEECC--CSH----HHHHHHHTTTCSEEEESCCSCCHHHHTSCCCCHHHHHHHHHHHHHHHHHHHTS
T ss_pred -HHHHHHhcCCCEEECCc--CCH----HHHHHHHHcCCCEEEECCCcccccccCCCCCChHHHHHHHHHHHHHhHhhcCC
Confidence 56677778999999743 333 34777888999999993211000 11235678888877776 54
Q ss_pred --CcEEEecCCCCHHHHHHHHHhh---hhhccccCCCC
Q psy4398 229 --IPVIANGGSKEIVDYGGVFSLN---CAFLRNHYPVE 261 (306)
Q Consensus 229 --ipvia~GGI~s~~~~~~~l~~~---v~vGrall~~p 261 (306)
+|||++|||++..|+.+++..| |++||+++..+
T Consensus 276 ~~ipvia~GGI~~~~dv~kalalGA~~V~iG~~~l~~~ 313 (393)
T 2qr6_A 276 RYVHIIADGSIENSGDVVKAIACGADAVVLGSPLARAE 313 (393)
T ss_dssp CCCEEEECSSCCSHHHHHHHHHHTCSEEEECGGGGGST
T ss_pred cceEEEEECCCCCHHHHHHHHHcCCCEEEECHHHHcCC
Confidence 9999999999999999999875 49999976543
No 55
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=99.46 E-value=3.4e-12 Score=120.14 Aligned_cols=217 Identities=18% Similarity=0.128 Sum_probs=129.7
Q ss_pred ccccc-cccccCCceEEccCCCCCCHHHHHHHHHc-CCCEEEecceechhhhhhhhh----hhcccc-c----cccc---
Q psy4398 20 ANANQ-ANINYSNKIILAPMVRMNTLPFRLLALDY-GADLVYSEELVDHKLVKTERK----VNDLLN-T----IDFV--- 85 (306)
Q Consensus 20 ~~~~~-~~l~l~n~i~lAPm~~~t~~~~r~~~~~~-G~g~~~te~~~~~~~~~~~~~----~~~~l~-~----~~~~--- 85 (306)
+++++ ..+.++.||+.|||.++|+..+.....+. |.|.+- ...+++......+. +++.+. . ..+.
T Consensus 31 l~t~lt~~l~l~~PIi~a~M~~Vs~~~lA~Ava~aGGlGvi~-~~~~~e~~~~~i~~vk~~~~g~~~~P~~~~~nL~~~~ 109 (400)
T 3ffs_A 31 LETKLTKNVSLKIPLISSAMDTVTEHLMAVGMARLGGIGIIH-KNMDMESQVNEVLKVKNWISNLEKNESTPDQNLDKES 109 (400)
T ss_dssp CCEESSSSCEESSSEEECSCTTTCSSHHHHHHHTTTCEEEEC-SSSCHHHHHHHHHHHHCCC------------------
T ss_pred CccchhcccCCCCCEEeCCCCCcCcHHHHHHHHHCCCEEEeC-CCCCHHHHHHHHHHHHhhccCcccCCCCccccccCCC
Confidence 55666 46889999999999999999998865555 456665 45555544322211 111110 0 0000
Q ss_pred -CCCCCceeee------cCCCCCC--ceEEEecCCCHHHHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHH
Q psy4398 86 -DPLDGSVVFR------TCPREKN--KIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDI 156 (306)
Q Consensus 86 -~~~~~~~~~~------~~~~~~~--p~ivql~g~~~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~ 156 (306)
+....+.+.. .+++... .+.+.+...+ ...+...+++|+|.|.|+.+.. +++.
T Consensus 110 ~~~~~~~~~~~~~~~p~~~~d~~g~l~v~~~v~~~~---~e~~~~lveaGvdvIvldta~G---------------~~~~ 171 (400)
T 3ffs_A 110 TDGKDTKSNNNIDAYSNENLDNKGRLRVGAAIGVNE---IERAKLLVEAGVDVIVLDSAHG---------------HSLN 171 (400)
T ss_dssp -------------CCTTCCBCTTSSBCCEEEECCC----CHHHHHHHHHTCSEEEECCSCC---------------SBHH
T ss_pred CCHHHHHHHHHhhhCcchhhccccceeEEeecCCCH---HHHHHHHHHcCCCEEEEeCCCC---------------Cccc
Confidence 0000000000 0011111 2333333332 2233334456999999974421 3456
Q ss_pred HHHHHHHHHhcccccEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcc------cCCCCCCCCCCcHHHHHHHHhh---C
Q psy4398 157 ACNILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHG------RTKAERPRHRNRIEMIRTLTQH---L 227 (306)
Q Consensus 157 ~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~------~~~~~~~~~p~~~~~v~~i~~~---~ 227 (306)
+.++++.+++..+.||.++.- . +.+.|+.++++|+|+|.+.. .++.....+.+.+..+.++++. +
T Consensus 172 ~~e~I~~ik~~~~i~Vi~g~V--~----t~e~A~~a~~aGAD~I~vG~g~Gs~~~tr~~~g~g~p~~~al~~v~~~~~~~ 245 (400)
T 3ffs_A 172 IIRTLKEIKSKMNIDVIVGNV--V----TEEATKELIENGADGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVASKF 245 (400)
T ss_dssp HHHHHHHHHTTCCCEEEEEEE--C----SHHHHHHHHHTTCSEEEECC---------CCSCBCCCHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHhcCCCeEEEeec--C----CHHHHHHHHHcCCCEEEEeCCCCcCcccccccccchhHHHHHHHHHHHHHhc
Confidence 678889999888899988533 1 36778889999999999831 1111112233477778777765 5
Q ss_pred CCcEEEecCCCCHHHHHHHHHhh---hhhccccCCCC
Q psy4398 228 KIPVIANGGSKEIVDYGGVFSLN---CAFLRNHYPVE 261 (306)
Q Consensus 228 ~ipvia~GGI~s~~~~~~~l~~~---v~vGrall~~p 261 (306)
++|||+.|||.+.+++.++++.| |++|++++.-+
T Consensus 246 ~IPVIA~GGI~~~~di~kalalGAd~V~vGt~f~~t~ 282 (400)
T 3ffs_A 246 GIPIIADGGIRYSGDIGKALAVGASSVMIGSILAGTE 282 (400)
T ss_dssp TCCEEEESCCCSHHHHHHHHTTTCSEEEECGGGTTBT
T ss_pred CCCEEecCCCCCHHHHHHHHHcCCCEEEEChHHhcCC
Confidence 89999999999999999999875 49999998643
No 56
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=99.46 E-value=9.4e-13 Score=122.81 Aligned_cols=196 Identities=17% Similarity=0.137 Sum_probs=125.5
Q ss_pred cccccc-ccccCCceEEccCCCCCCHHHHHH-HHHcCCCEEEecceechhhhhhhhhhhcccccccccCCCCCceeeecC
Q psy4398 20 ANANQA-NINYSNKIILAPMVRMNTLPFRLL-ALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDGSVVFRTC 97 (306)
Q Consensus 20 ~~~~~~-~l~l~n~i~lAPm~~~t~~~~r~~-~~~~G~g~~~te~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 97 (306)
+++++. .+.++.||+.|||.++++..+... ++.+|.|++-. ..+++......+.... .
T Consensus 35 l~t~lt~~~~l~~Pii~apM~~vs~~~lA~avA~aGGlg~i~~-~~s~e~~~~~i~~vk~-------------------~ 94 (366)
T 4fo4_A 35 LRTRLTKNIALNIPMVSASMDTVTEARLAIALAQEGGIGFIHK-NMSIEQQAAQVHQVKI-------------------S 94 (366)
T ss_dssp CCEEEETTEEESSSEEECCCTTTCSHHHHHHHHHTTCEEEECS-SSCHHHHHHHHHHHHT-------------------T
T ss_pred cceecccccccCCCEEeCCCCCCChHHHHHHHHHcCCceEeec-CCCHHHHHHHHHHHHh-------------------c
Confidence 556665 688999999999999999998865 44455566543 2333322211111000 0
Q ss_pred CCCCCceEEEecCCCHHHHHHHHH-HHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc-cccEEEE
Q psy4398 98 PREKNKIILQIGTADPERALEAAK-KVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL-SIPVSCK 175 (306)
Q Consensus 98 ~~~~~p~ivql~g~~~~~~~~aa~-~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vK 175 (306)
...++.+.+ +.+++ +.+.++ .+++|+|.|.||... | +++.+.+.++.+++.. ++|+.+.
T Consensus 95 --~~l~vga~v-g~~~~-~~~~~~~lieaGvd~I~idta~----------G-----~~~~~~~~I~~ik~~~p~v~Vi~G 155 (366)
T 4fo4_A 95 --GGLRVGAAV-GAAPG-NEERVKALVEAGVDVLLIDSSH----------G-----HSEGVLQRIRETRAAYPHLEIIGG 155 (366)
T ss_dssp --TSCCCEEEC-CSCTT-CHHHHHHHHHTTCSEEEEECSC----------T-----TSHHHHHHHHHHHHHCTTCEEEEE
T ss_pred --CceeEEEEe-ccChh-HHHHHHHHHhCCCCEEEEeCCC----------C-----CCHHHHHHHHHHHHhcCCCceEee
Confidence 011233333 22332 333344 445699999998542 1 3456677888998887 7788775
Q ss_pred eccCCChHHHHHHHHHHHHcCCcEEEEcccCCCCC-------CCCCCcHHHHHHHHh---hCCCcEEEecCCCCHHHHHH
Q psy4398 176 IRVFHNEADTIALCKRLEACGIIAIGVHGRTKAER-------PRHRNRIEMIRTLTQ---HLKIPVIANGGSKEIVDYGG 245 (306)
Q Consensus 176 ir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~-------~~~p~~~~~v~~i~~---~~~ipvia~GGI~s~~~~~~ 245 (306)
.- . +.+.++.++++|+|+|.+ +...... ..+.+.+..+.++++ .+++|||+.|||.+..++.+
T Consensus 156 ~v--~----t~e~A~~a~~aGAD~I~v-G~gpGs~~~tr~~~g~g~p~~~~l~~v~~~~~~~~iPVIA~GGI~~~~di~k 228 (366)
T 4fo4_A 156 NV--A----TAEGARALIEAGVSAVKV-GIGPGSICTTRIVTGVGVPQITAIADAAGVANEYGIPVIADGGIRFSGDISK 228 (366)
T ss_dssp EE--C----SHHHHHHHHHHTCSEEEE-CSSCSTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHH
T ss_pred ee--C----CHHHHHHHHHcCCCEEEE-ecCCCCCCCcccccCcccchHHHHHHHHHHHhhcCCeEEEeCCCCCHHHHHH
Confidence 32 1 356778889999999999 2211110 123346667776665 56899999999999999999
Q ss_pred HHHhh---hhhccccCCCC
Q psy4398 246 VFSLN---CAFLRNHYPVE 261 (306)
Q Consensus 246 ~l~~~---v~vGrall~~p 261 (306)
++..| +++|++++.-+
T Consensus 229 ala~GAd~V~vGs~f~~t~ 247 (366)
T 4fo4_A 229 AIAAGASCVMVGSMFAGTE 247 (366)
T ss_dssp HHHTTCSEEEESTTTTTBT
T ss_pred HHHcCCCEEEEChHhhcCC
Confidence 99875 49999998644
No 57
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=99.44 E-value=2.1e-13 Score=134.23 Aligned_cols=178 Identities=16% Similarity=0.023 Sum_probs=131.3
Q ss_pred ceEEEecCCCHH--H--------HHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHH-hccccc
Q psy4398 103 KIILQIGTADPE--R--------ALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLI-SNLSIP 171 (306)
Q Consensus 103 p~ivql~g~~~~--~--------~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~-~~~~~p 171 (306)
++-+|++|.-.+ + +..+.+.++.|+|.|.||..|- .+..+-..++..+.+++++.++.+.+. +.+-+.
T Consensus 327 ~ipi~vgGGIr~~~d~~~~~~~~~~~a~~~l~aGad~V~igt~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~ivv~ 405 (555)
T 1jvn_A 327 FVPLTVGGGIKDIVDVDGTKIPALEVASLYFRSGADKVSIGTDAV-YAAEKYYELGNRGDGTSPIETISKAYGAQAVVIS 405 (555)
T ss_dssp CSCEEEESSCSCEECTTCCEECHHHHHHHHHHHTCSEEEECHHHH-HHHHHHHHTTSCCCSCSHHHHHHHHHCGGGEEEE
T ss_pred CCcEEEeCccccchhcccccchHHHHHHHHHHcCCCEEEECCHHh-hCchhhccccccccCHHHHHHHHHHhCCCcEEEE
Confidence 455777665422 1 2334445567999999998872 111111112335678999999999985 345555
Q ss_pred EEEEec--------------------------------cCCCh---HHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCc
Q psy4398 172 VSCKIR--------------------------------VFHNE---ADTIALCKRLEACGIIAIGVHGRTKAERPRHRNR 216 (306)
Q Consensus 172 v~vKir--------------------------------~g~~~---~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~ 216 (306)
+++|.. .||+. .+..++++.++++|++.|.+|++++++.+.++ +
T Consensus 406 iD~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~Gw~~~~~~~~~e~a~~~~~~Ga~~il~t~~~~dG~~~G~-d 484 (555)
T 1jvn_A 406 VDPKRVYVNSQADTKNKVFETEYPGPNGEKYCWYQCTIKGGRESRDLGVWELTRACEALGAGEILLNCIDKDGSNSGY-D 484 (555)
T ss_dssp ECEEEEEESSGGGCSSCCEECSSCCTTCCCEEEEEEEETTTTEEEEEEHHHHHHHHHHTTCCEEEECCGGGTTTCSCC-C
T ss_pred EEccccccccccccccccccccccCCCCCcceeEEEEEecCccCCCCCHHHHHHHHHHcCCCEEEEeCCCCCCCCCCC-C
Confidence 666521 14543 24789999999999999999999999999886 9
Q ss_pred HHHHHHHHhhCCCcEEEecCCCCHHHHHHHHH-h---hhhhccccCCCCCchHHHHHHHHHhcCCCCCcce
Q psy4398 217 IEMIRTLTQHLKIPVIANGGSKEIVDYGGVFS-L---NCAFLRNHYPVEKLPKTILYAHCKYKRFEVPKYE 283 (306)
Q Consensus 217 ~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~-~---~v~vGrall~~p~~~~~~l~~~~~~~g~~~~~~~ 283 (306)
|++++++++.+++|||++|||.|++|+.++++ . ++++||+++.+++. -.++.+|++++|+++..|.
T Consensus 485 ~~li~~l~~~~~iPVIasGGi~s~~d~~~~~~~~G~~gvivg~a~~~~~~~-~~e~~~~l~~~gi~~r~~~ 554 (555)
T 1jvn_A 485 LELIEHVKDAVKIPVIASSGAGVPEHFEEAFLKTRADACLGAGMFHRGEFT-VNDVKEYLLEHGLKVRMDE 554 (555)
T ss_dssp HHHHHHHHHHCSSCEEECSCCCSHHHHHHHHHHSCCSEEEESHHHHTTSCC-HHHHHHHHHHTTCCCCCCC
T ss_pred HHHHHHHHHhCCccEEEECCCCCHHHHHHHHHhcCChHHHHHHHHHcCCCC-HHHHHHHHHHCCCccccCC
Confidence 99999999999999999999999999999998 3 45999999987732 3366788999998765443
No 58
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=99.40 E-value=1.9e-11 Score=113.71 Aligned_cols=195 Identities=12% Similarity=0.073 Sum_probs=130.3
Q ss_pred cccccc-----ccccCCceEEccCCCCCCHHHHHHHHHcCC-CEEEecceechhhhhhhhhhhcccccccccCCCCCcee
Q psy4398 20 ANANQA-----NINYSNKIILAPMVRMNTLPFRLLALDYGA-DLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDGSVV 93 (306)
Q Consensus 20 ~~~~~~-----~l~l~n~i~lAPm~~~t~~~~r~~~~~~G~-g~~~te~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 93 (306)
+++++. ++.++.||+.|||.+.++..+...+.+.|. |.+ ....+.+......+. +| .
T Consensus 42 l~t~l~~~~~~~~~l~~PIi~ApM~~~~~~~lA~Ava~~Gglg~i-~~~~s~e~~~~~i~~-----------~p---~-- 104 (351)
T 2c6q_A 42 LTRSFSFRNSKQTYSGVPIIAANMDTVGTFEMAKVLCKFSLFTAV-HKHYSLVQWQEFAGQ-----------NP---D-- 104 (351)
T ss_dssp CCEEEECTTTCCEEEECCEEECSSTTTSCHHHHHHHHHTTCEEEC-CTTCCHHHHHHHHHH-----------CG---G--
T ss_pred eEEEeccccCcCccccCCEEECCCCCCCcHHHHHHHHHCCCEEEE-cCCCCHHHHHHHHhh-----------Cc---h--
Confidence 777886 999999999999999999888876666663 444 333333322211111 11 0
Q ss_pred eecCCCCCCceEEEecCCCHHHHHHHHHHHhc--CCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc-cc
Q psy4398 94 FRTCPREKNKIILQIGTADPERALEAAKKVEH--DVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL-SI 170 (306)
Q Consensus 94 ~~~~~~~~~p~ivql~g~~~~~~~~aa~~~~~--g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~ 170 (306)
.+ .++.+.+ +.+++++..+...++. |++.+++++.. | ++..+.+.++++++.+ ++
T Consensus 105 --~l----~~v~~~~-g~~~~~~~~~~~l~~~~~g~~~i~i~~~~----------g-----~~~~~~~~i~~lr~~~~~~ 162 (351)
T 2c6q_A 105 --CL----EHLAASS-GTGSSDFEQLEQILEAIPQVKYICLDVAN----------G-----YSEHFVEFVKDVRKRFPQH 162 (351)
T ss_dssp --GC----TTEEEEE-CSSHHHHHHHHHHHHHCTTCCEEEEECSC----------T-----TBHHHHHHHHHHHHHCTTS
T ss_pred --hh----heeEeec-CCChHHHHHHHHHHhccCCCCEEEEEecC----------C-----CcHHHHHHHHHHHHhcCCC
Confidence 00 1355555 4556666666666665 89999997532 1 3456778899999988 78
Q ss_pred cEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcccCC--C-CC---CCCCCcHHHHHHH---HhhCCCcEEEecCCCCHH
Q psy4398 171 PVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTK--A-ER---PRHRNRIEMIRTL---TQHLKIPVIANGGSKEIV 241 (306)
Q Consensus 171 pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~--~-~~---~~~p~~~~~v~~i---~~~~~ipvia~GGI~s~~ 241 (306)
||.+|.- . ..+.|+.+.++|+|+|.+..... . .+ ..+.+.+..+.++ .+..++|||+.|||.+..
T Consensus 163 ~vi~g~v--~----t~e~A~~a~~aGaD~I~v~~g~G~~~~~r~~~g~~~p~~~~l~~v~~~~~~~~ipvIa~GGI~~g~ 236 (351)
T 2c6q_A 163 TIMAGNV--V----TGEMVEELILSGADIIKVGIGPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPG 236 (351)
T ss_dssp EEEEEEE--C----SHHHHHHHHHTTCSEEEECSSCSTTBCHHHHHCBCCCHHHHHHHHHHHHHHTTCEEEEESCCCSHH
T ss_pred eEEEEeC--C----CHHHHHHHHHhCCCEEEECCCCCcCcCccccCCCCccHHHHHHHHHHHHhhcCCcEEEeCCCCCHH
Confidence 9988744 2 25677888999999998853110 0 00 0122344444444 444589999999999999
Q ss_pred HHHHHHHhh---hhhccccCC
Q psy4398 242 DYGGVFSLN---CAFLRNHYP 259 (306)
Q Consensus 242 ~~~~~l~~~---v~vGrall~ 259 (306)
|+.+++..| |++||+++.
T Consensus 237 di~kAlalGA~~V~vG~~fl~ 257 (351)
T 2c6q_A 237 DVAKAFGAGADFVMLGGMLAG 257 (351)
T ss_dssp HHHHHHHTTCSEEEESTTTTT
T ss_pred HHHHHHHcCCCceeccHHHhc
Confidence 999999986 499999985
No 59
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=99.39 E-value=4e-12 Score=112.02 Aligned_cols=147 Identities=17% Similarity=0.220 Sum_probs=114.9
Q ss_pred CCCceEEEecCCCHHHHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccE-------
Q psy4398 100 EKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPV------- 172 (306)
Q Consensus 100 ~~~p~ivql~g~~~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv------- 172 (306)
.+.|+++..+-.++++.. ..++.|+|.|-++ ..++.+|+.+.++++.+.+.+.+.+
T Consensus 73 ~~ipv~v~ggi~~~~~~~---~~l~~Gad~V~lg--------------~~~l~~p~~~~~~~~~~g~~~~~~ld~~~~~~ 135 (244)
T 2y88_A 73 LDVQVELSGGIRDDESLA---AALATGCARVNVG--------------TAALENPQWCARVIGEHGDQVAVGLDVQIIDG 135 (244)
T ss_dssp CSSEEEEESSCCSHHHHH---HHHHTTCSEEEEC--------------HHHHHCHHHHHHHHHHHGGGEEEEEEEEEETT
T ss_pred cCCcEEEECCCCCHHHHH---HHHHcCCCEEEEC--------------chHhhChHHHHHHHHHcCCCEEEEEeccccCC
Confidence 356888776667776533 3334699999884 3456788889999988865443333
Q ss_pred --EEEeccCCCh--HHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHH
Q psy4398 173 --SCKIRVFHNE--ADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFS 248 (306)
Q Consensus 173 --~vKir~g~~~--~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~ 248 (306)
.||++ ||.. .+..++++.+++.|++.|.+|++++++.+.++ +++.++++++.+++|||++|||++++++.++++
T Consensus 136 ~~~v~~~-g~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~~~~~g~-~~~~~~~l~~~~~ipvia~GGI~~~~d~~~~~~ 213 (244)
T 2y88_A 136 EHRLRGR-GWETDGGDLWDVLERLDSEGCSRFVVTDITKDGTLGGP-NLDLLAGVADRTDAPVIASGGVSSLDDLRAIAT 213 (244)
T ss_dssp EEEEEEG-GGTEEEEEHHHHHHHHHHTTCCCEEEEETTTTTTTSCC-CHHHHHHHHTTCSSCEEEESCCCSHHHHHHHHT
T ss_pred CCEEEEC-CccCCCCCHHHHHHHHHhCCCCEEEEEecCCccccCCC-CHHHHHHHHHhCCCCEEEECCCCCHHHHHHHHh
Confidence 45566 5532 25789999999999999999999988777765 999999999999999999999999999999998
Q ss_pred h---hh---hhccccCCCCCchH
Q psy4398 249 L---NC---AFLRNHYPVEKLPK 265 (306)
Q Consensus 249 ~---~v---~vGrall~~p~~~~ 265 (306)
. ++ ++||+++.+|....
T Consensus 214 ~~~~Gad~v~vG~al~~~~~~~~ 236 (244)
T 2y88_A 214 LTHRGVEGAIVGKALYARRFTLP 236 (244)
T ss_dssp TGGGTEEEEEECHHHHTTSSCHH
T ss_pred hccCCCCEEEEcHHHHCCCcCHH
Confidence 7 65 99999999995543
No 60
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=99.31 E-value=6e-11 Score=105.04 Aligned_cols=160 Identities=19% Similarity=0.141 Sum_probs=119.4
Q ss_pred CCCceEEEecCCCHHHHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHh-cccccEEEE---
Q psy4398 100 EKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLIS-NLSIPVSCK--- 175 (306)
Q Consensus 100 ~~~p~ivql~g~~~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~-~~~~pv~vK--- 175 (306)
.+.|+++.-+-.++++..+ .++.|+|+|-++ .....+|+.+.++++.+.. .+.+.++++
T Consensus 73 ~~ipvi~~ggI~~~~~~~~---~~~~Gad~V~lg--------------~~~l~~p~~~~~~~~~~g~~~i~~~~~~~~~~ 135 (253)
T 1thf_D 73 IDIPFTVGGGIHDFETASE---LILRGADKVSIN--------------TAAVENPSLITQIAQTFGSQAVVVAIDAKRVD 135 (253)
T ss_dssp CCSCEEEESSCCSHHHHHH---HHHTTCSEEEES--------------HHHHHCTHHHHHHHHHHCGGGEEEEEEEEEET
T ss_pred CCCCEEEeCCCCCHHHHHH---HHHcCCCEEEEC--------------hHHHhChHHHHHHHHHcCCCcEEEEEEEEccC
Confidence 3568887755566765333 334699999773 4455678888888888743 333444443
Q ss_pred ------eccCCCh---HHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHH
Q psy4398 176 ------IRVFHNE---ADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGV 246 (306)
Q Consensus 176 ------ir~g~~~---~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~ 246 (306)
+. +|.. .+..++++.+++.|++.|.+|++.+++...++ +++.++++++.+++|||++|||++++++.++
T Consensus 136 g~~~v~~~-g~~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~g~~~g~-~~~~~~~l~~~~~ipvia~GGI~~~~d~~~~ 213 (253)
T 1thf_D 136 GEFMVFTY-SGKKNTGILLRDWVVEVEKRGAGEILLTSIDRDGTKSGY-DTEMIRFVRPLTTLPIIASGGAGKMEHFLEA 213 (253)
T ss_dssp TEEEEEET-TTTEEEEEEHHHHHHHHHHTTCSEEEEEETTTTTSCSCC-CHHHHHHHGGGCCSCEEEESCCCSHHHHHHH
T ss_pred CcEEEEEC-CCccccCCCHHHHHHHHHHCCCCEEEEEeccCCCCCCCC-CHHHHHHHHHhcCCCEEEECCCCCHHHHHHH
Confidence 32 3432 24788999999999999999988887777765 8999999999999999999999999999999
Q ss_pred HHhh---hhhccccCCCCCchHHHHHHHHHhcCCCC
Q psy4398 247 FSLN---CAFLRNHYPVEKLPKTILYAHCKYKRFEV 279 (306)
Q Consensus 247 l~~~---v~vGrall~~p~~~~~~l~~~~~~~g~~~ 279 (306)
++.| +++|++++.+|...+ +..+++++.|+++
T Consensus 214 ~~~Gadgv~vGsal~~~~~~~~-~~~~~l~~~g~~~ 248 (253)
T 1thf_D 214 FLAGADAALAASVFHFREIDVR-ELKEYLKKHGVNV 248 (253)
T ss_dssp HHTTCSEEEESHHHHTTCSCHH-HHHHHHHHTTCCC
T ss_pred HHcCChHHHHHHHHHcCCCCHH-HHHHHHHHcCCcc
Confidence 9875 499999998884332 4456678888764
No 61
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=99.30 E-value=7e-13 Score=117.41 Aligned_cols=147 Identities=18% Similarity=0.196 Sum_probs=33.2
Q ss_pred CCCceEEEecCCCHHHHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHH-HhcccccEEEE---
Q psy4398 100 EKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTL-ISNLSIPVSCK--- 175 (306)
Q Consensus 100 ~~~p~ivql~g~~~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v-~~~~~~pv~vK--- 175 (306)
.+.|+++.=+-.++++..++ ++.|+|+|-| |..++.+|+++.++.+.+ .+.+-+.+++|
T Consensus 78 ~~ipvi~~Ggi~~~~~~~~~---l~~Gad~V~i--------------g~~~l~dp~~~~~~~~~~g~~~iv~~ld~~~~~ 140 (247)
T 3tdn_A 78 TTLPIIASGGAGKMEHFLEA---FLRGADKVSI--------------NTAAVENPSLITQIAQTFGSQAVVVAIDAKRVD 140 (247)
T ss_dssp CCSCEEEESCCCSHHHHHHH---HHTTCSEECC--------------SHHHHHCTHHHHHHHHHHC--------------
T ss_pred CCCCEEEeCCCCCHHHHHHH---HHcCCCeeeh--------------hhHHhhChHHHHHHHHHhCCCcEEEEEEeccCC
Confidence 35677765444566664433 4569999877 456677899888888887 34443344443
Q ss_pred ------eccCCCh---HHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHH
Q psy4398 176 ------IRVFHNE---ADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGV 246 (306)
Q Consensus 176 ------ir~g~~~---~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~ 246 (306)
++ ||.. .+..++++.+++.|++.|.+|++.+++.+.+ ++++.++++++.+++|||++|||.|++++.++
T Consensus 141 ~~~~v~~~-g~~~~~~~~~~~~a~~~~~~G~~~i~~t~~~~~g~~~g-~~~~~~~~i~~~~~iPvia~GGI~~~~d~~~~ 218 (247)
T 3tdn_A 141 GEFMVFTY-SGKKNTGILLRDWVVEVEKRGAGEILLTSIDRDGTKSG-YDTEMIRFVRPLTTLPIIASGGAGKMEHFLEA 218 (247)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCEEEEEC-CCcccCCCCHHHHHHHHHhcCCCEEEEecccCCCCcCC-CCHHHHHHHHHhCCCCEEEECCCCCHHHHHHH
Confidence 33 4543 3577899999999999999999887777666 48899999999999999999999999999999
Q ss_pred HHh---hhhhccccCCCCCchH
Q psy4398 247 FSL---NCAFLRNHYPVEKLPK 265 (306)
Q Consensus 247 l~~---~v~vGrall~~p~~~~ 265 (306)
++. ++++||+++.+|++.+
T Consensus 219 ~~~Gad~v~vg~al~~~p~~~~ 240 (247)
T 3tdn_A 219 FLRGADKVSINTAAVENPSLIT 240 (247)
T ss_dssp ----------------------
T ss_pred HHcCCcHhhccHHHHcCcHHHH
Confidence 987 4599999999996554
No 62
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=99.30 E-value=3.3e-11 Score=106.24 Aligned_cols=146 Identities=16% Similarity=0.210 Sum_probs=107.5
Q ss_pred CCCceEEEecCCCHHHHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEe---
Q psy4398 100 EKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKI--- 176 (306)
Q Consensus 100 ~~~p~ivql~g~~~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKi--- 176 (306)
.+.|+++..+-.++++.. ..++.|+|.|-++ .....+|+.+.++++.+...+.+.++++.
T Consensus 74 ~~ipv~v~ggI~~~~~~~---~~l~~Gad~V~lg--------------~~~l~~p~~~~~~~~~~g~~~~~~l~~~~g~v 136 (244)
T 1vzw_A 74 MDIKVELSGGIRDDDTLA---AALATGCTRVNLG--------------TAALETPEWVAKVIAEHGDKIAVGLDVRGTTL 136 (244)
T ss_dssp CSSEEEEESSCCSHHHHH---HHHHTTCSEEEEC--------------HHHHHCHHHHHHHHHHHGGGEEEEEEEETTEE
T ss_pred cCCcEEEECCcCCHHHHH---HHHHcCCCEEEEC--------------chHhhCHHHHHHHHHHcCCcEEEEEEccCCEE
Confidence 356888776667776533 3344699999884 34556788888888887655555565541
Q ss_pred -ccCCChH--HHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHh---h
Q psy4398 177 -RVFHNEA--DTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSL---N 250 (306)
Q Consensus 177 -r~g~~~~--~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~---~ 250 (306)
..||... +..++++.+++.|++.|.+|++.+++.+.++ +++.++++++.+++|||++|||++++++.++++. |
T Consensus 137 ~~~g~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~~~~~g~-~~~~~~~i~~~~~ipvia~GGI~~~~d~~~~~~~~~~G 215 (244)
T 1vzw_A 137 RGRGWTRDGGDLYETLDRLNKEGCARYVVTDIAKDGTLQGP-NLELLKNVCAATDRPVVASGGVSSLDDLRAIAGLVPAG 215 (244)
T ss_dssp CCSSSCCCCCBHHHHHHHHHHTTCCCEEEEEC-------CC-CHHHHHHHHHTCSSCEEEESCCCSHHHHHHHHTTGGGT
T ss_pred EEcCcccCCCCHHHHHHHHHhCCCCEEEEeccCcccccCCC-CHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHhhccCC
Confidence 1245321 5788899999999999999998877766664 8999999999999999999999999999999987 6
Q ss_pred h---hhccccCCCCCc
Q psy4398 251 C---AFLRNHYPVEKL 263 (306)
Q Consensus 251 v---~vGrall~~p~~ 263 (306)
+ ++||+++.+|+.
T Consensus 216 adgv~vG~al~~~~~~ 231 (244)
T 1vzw_A 216 VEGAIVGKALYAKAFT 231 (244)
T ss_dssp EEEEEECHHHHTTSSC
T ss_pred CceeeeeHHHHcCCCC
Confidence 5 999999998844
No 63
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=99.29 E-value=6.7e-11 Score=104.63 Aligned_cols=160 Identities=12% Similarity=0.103 Sum_probs=118.1
Q ss_pred CCCceEEEecCCCHHHHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHh-cccccEEE----
Q psy4398 100 EKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLIS-NLSIPVSC---- 174 (306)
Q Consensus 100 ~~~p~ivql~g~~~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~-~~~~pv~v---- 174 (306)
.+.|+++.=+-.++++..++ ++.|+|+|-+ |..+..+|+.+.++.+.+.. .+-..+++
T Consensus 74 ~~iPvi~~Ggi~~~~~~~~~---~~~Gad~V~l--------------g~~~l~~p~~~~~~~~~~~~~~i~~~~~~~~~~ 136 (252)
T 1ka9_F 74 VFIPLTVGGGVRSLEDARKL---LLSGADKVSV--------------NSAAVRRPELIRELADHFGAQAVVLAIDARWRG 136 (252)
T ss_dssp CCSCEEEESSCCSHHHHHHH---HHHTCSEEEE--------------CHHHHHCTHHHHHHHHHHCGGGEEEEEEEEEET
T ss_pred CCCCEEEECCcCCHHHHHHH---HHcCCCEEEE--------------ChHHHhCcHHHHHHHHHcCCCcEEEEEEEecCC
Confidence 45688776444555543333 3359999988 44556778888888888742 22233443
Q ss_pred -----EeccCCCh---HHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHH
Q psy4398 175 -----KIRVFHNE---ADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGV 246 (306)
Q Consensus 175 -----Kir~g~~~---~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~ 246 (306)
++. ||.. .+..+.++.+++.|++.|.+|++.+++.+.++ +++.++++++.+++|||++|||++++++.++
T Consensus 137 g~~~v~~~-g~~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~g~~~g~-~~~~i~~l~~~~~ipvia~GGI~~~~d~~~~ 214 (252)
T 1ka9_F 137 DFPEVHVA-GGRVPTGLHAVEWAVKGVELGAGEILLTSMDRDGTKEGY-DLRLTRMVAEAVGVPVIASGGAGRMEHFLEA 214 (252)
T ss_dssp TEEEEEET-TTTEEEEEEHHHHHHHHHHHTCCEEEEEETTTTTTCSCC-CHHHHHHHHHHCSSCEEEESCCCSHHHHHHH
T ss_pred CCEEEEEC-CCccccCCcHHHHHHHHHHcCCCEEEEecccCCCCcCCC-CHHHHHHHHHHcCCCEEEeCCCCCHHHHHHH
Confidence 332 4533 34788999999999999999988777777665 8999999999999999999999999999999
Q ss_pred HHh---hhhhccccCCCCCchHHHHHHHHHhcCCCC
Q psy4398 247 FSL---NCAFLRNHYPVEKLPKTILYAHCKYKRFEV 279 (306)
Q Consensus 247 l~~---~v~vGrall~~p~~~~~~l~~~~~~~g~~~ 279 (306)
++. ++++|++++.+|...+ ++.+++++.|+++
T Consensus 215 ~~~Gadgv~vgsal~~~~~~~~-~~~~~l~~~~~~~ 249 (252)
T 1ka9_F 215 FQAGAEAALAASVFHFGEIPIP-KLKRYLAEKGVHV 249 (252)
T ss_dssp HHTTCSEEEESHHHHTTSSCHH-HHHHHHHHTTCCB
T ss_pred HHCCCHHHHHHHHHHcCCCCHH-HHHHHHHHCCCCc
Confidence 986 4599999998874433 3456788888764
No 64
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.29 E-value=5.3e-11 Score=115.52 Aligned_cols=127 Identities=16% Similarity=0.079 Sum_probs=93.1
Q ss_pred CHHHHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc-cccEEEEeccCCChHHHHHHHH
Q psy4398 112 DPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL-SIPVSCKIRVFHNEADTIALCK 190 (306)
Q Consensus 112 ~~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~g~~~~~~~~~a~ 190 (306)
..+.+..+...+++|+|.|+||.+||+ .+.+.++++++++.. +.||.++-- . ..+.++
T Consensus 229 ~~d~~~~a~~l~~aG~d~I~id~a~g~---------------~~~~~~~i~~ir~~~p~~~Vi~g~v--~----t~e~a~ 287 (496)
T 4fxs_A 229 APGNEERVKALVEAGVDVLLIDSSHGH---------------SEGVLQRIRETRAAYPHLEIIGGNV--A----TAEGAR 287 (496)
T ss_dssp SSCCHHHHHHHHHTTCSEEEEECSCTT---------------SHHHHHHHHHHHHHCTTCCEEEEEE--C----SHHHHH
T ss_pred ccchHHHHHHHHhccCceEEecccccc---------------chHHHHHHHHHHHHCCCceEEEccc--C----cHHHHH
Confidence 334455555555679999999998864 345678899999887 789888533 1 246678
Q ss_pred HHHHcCCcEEEEcccC------CCCCCCCCCcHHHHHHHHhhC---CCcEEEecCCCCHHHHHHHHHhh---hhhccccC
Q psy4398 191 RLEACGIIAIGVHGRT------KAERPRHRNRIEMIRTLTQHL---KIPVIANGGSKEIVDYGGVFSLN---CAFLRNHY 258 (306)
Q Consensus 191 ~l~~~G~d~i~v~~~~------~~~~~~~p~~~~~v~~i~~~~---~ipvia~GGI~s~~~~~~~l~~~---v~vGrall 258 (306)
.+.++|+|+|.+.... +.....+.+.+..+.++++.+ ++|||+.|||.+..|+.++++.| +++||++.
T Consensus 288 ~l~~aGaD~I~Vg~g~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIa~GGI~~~~di~kala~GAd~V~iGs~f~ 367 (496)
T 4fxs_A 288 ALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEYGIPVIADGGIRFSGDISKAIAAGASCVMVGSMFA 367 (496)
T ss_dssp HHHHHTCSEEEECSSCCTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTT
T ss_pred HHHHhCCCEEEECCCCCcCcccccccCCCccHHHHHHHHHHHhccCCCeEEEeCCCCCHHHHHHHHHcCCCeEEecHHHh
Confidence 8899999999985321 110112334777777777644 79999999999999999999875 49999987
Q ss_pred C
Q psy4398 259 P 259 (306)
Q Consensus 259 ~ 259 (306)
.
T Consensus 368 ~ 368 (496)
T 4fxs_A 368 G 368 (496)
T ss_dssp T
T ss_pred c
Confidence 5
No 65
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=99.28 E-value=3.5e-11 Score=105.92 Aligned_cols=160 Identities=16% Similarity=0.144 Sum_probs=119.0
Q ss_pred CCceEEEecCCCHHHHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHh-cc----cc-----
Q psy4398 101 KNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLIS-NL----SI----- 170 (306)
Q Consensus 101 ~~p~ivql~g~~~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~-~~----~~----- 170 (306)
+.|+++.-.-.+++++.+ .++.|+|+|.++. .+..+++.+.++.+.... .+ +.
T Consensus 77 ~ipvi~~g~i~~~~~~~~---~~~~Gad~V~i~~--------------~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~g 139 (253)
T 1h5y_A 77 SIPVLVGGGVRSLEDATT---LFRAGADKVSVNT--------------AAVRNPQLVALLAREFGSQSTVVAIDAKWNGE 139 (253)
T ss_dssp SSCEEEESSCCSHHHHHH---HHHHTCSEEEESH--------------HHHHCTHHHHHHHHHHCGGGEEEEEEEEECSS
T ss_pred CCCEEEECCCCCHHHHHH---HHHcCCCEEEECh--------------HHhhCcHHHHHHHHHcCCCcEEEEEEeecCCC
Confidence 468887766667765433 2335999999962 234567777777777642 22 11
Q ss_pred cEEEEeccCCC--hHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHH
Q psy4398 171 PVSCKIRVFHN--EADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFS 248 (306)
Q Consensus 171 pv~vKir~g~~--~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~ 248 (306)
++.|+++.++. ..+..++++.+.+.|+|.|.++++...+...++ +++.++++++.+++||+++|||++.+++.++++
T Consensus 140 ~~~v~~~~~~~~~~~~~~e~~~~~~~~G~d~i~~~~~~~~g~~~~~-~~~~i~~l~~~~~~pvia~GGi~~~~~~~~~~~ 218 (253)
T 1h5y_A 140 YYEVYVKGGREATGLDAVKWAKEVEELGAGEILLTSIDRDGTGLGY-DVELIRRVADSVRIPVIASGGAGRVEHFYEAAA 218 (253)
T ss_dssp SEEEEETTTTEEEEEEHHHHHHHHHHHTCSEEEEEETTTTTTCSCC-CHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHH
T ss_pred cEEEEEeCCeecCCCCHHHHHHHHHhCCCCEEEEecccCCCCcCcC-CHHHHHHHHHhcCCCEEEeCCCCCHHHHHHHHH
Confidence 14666665432 134778899999999999999988876665554 899999999999999999999999999999988
Q ss_pred hh---hhhccccCCCCCchHHHHHHHHHhcCCCC
Q psy4398 249 LN---CAFLRNHYPVEKLPKTILYAHCKYKRFEV 279 (306)
Q Consensus 249 ~~---v~vGrall~~p~~~~~~l~~~~~~~g~~~ 279 (306)
.| +++|++++.++.. ..++.+||+++||++
T Consensus 219 ~Ga~~v~vgsal~~~~~~-~~~~~~~l~~~g~~~ 251 (253)
T 1h5y_A 219 AGADAVLAASLFHFRVLS-IAQVKRYLKERGVEV 251 (253)
T ss_dssp TTCSEEEESHHHHTTSSC-HHHHHHHHHHTTCBC
T ss_pred cCCcHHHHHHHHHcCCCC-HHHHHHHHHHcCCCC
Confidence 64 5999999987622 347788999999864
No 66
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=99.28 E-value=3.2e-11 Score=107.65 Aligned_cols=163 Identities=15% Similarity=0.031 Sum_probs=99.6
Q ss_pred CCCceEEEecCCCHHHHHHHHHHHhcCCCEEEEccCCCccccccCCcccccc-C--ChHHHHHHHHHHH---hcccccEE
Q psy4398 100 EKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALL-S--TPDIACNILTTLI---SNLSIPVS 173 (306)
Q Consensus 100 ~~~p~ivql~g~~~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~-~--~~~~~~eiv~~v~---~~~~~pv~ 173 (306)
.+.|+++.=+-.+++++.++. +.|+|+|-+. ..+. . +++.+.++++... +.+-..++
T Consensus 73 ~~iPvi~~ggi~~~~~i~~~~---~~Gad~v~lg--------------~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~d 135 (266)
T 2w6r_A 73 TTLPIIASGGAGKMEHFLEAF---LAGADKALAA--------------SVFHFREIDMRELKEYLKKHGGSGQAVVVAID 135 (266)
T ss_dssp CCSCEEEESCCCSTHHHHHHH---HHTCSEEECC--------------CCC------CHHHHHHCC----CCCEEEEEEE
T ss_pred cCCCEEEECCCCCHHHHHHHH---HcCCcHhhhh--------------HHHHhCCCCHHHHHHHHHHcCCCCCEEEEEEE
Confidence 357888764435566654333 3599998883 2333 3 6777777776654 23222333
Q ss_pred ---------EEeccCCCh---HHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHH
Q psy4398 174 ---------CKIRVFHNE---ADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIV 241 (306)
Q Consensus 174 ---------vKir~g~~~---~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~ 241 (306)
|+++ +|.. .+..++++.+++.|++.|.++++.+++.+.++ +++.++++++.+++|||++|||++++
T Consensus 136 ~~~~~g~~~v~~~-g~~~~~~~~~~e~~~~~~~~G~~~i~~t~~~~~g~~~g~-~~~~i~~l~~~~~ipvia~GGI~~~e 213 (266)
T 2w6r_A 136 AKRVDGEFMVFTH-SGKKNTGILLRDWVVEVEKRGAGEILLTSIDRDGTKSGY-DTEMIRFVRPLTTLPIIASGGAGKME 213 (266)
T ss_dssp EEEETTEEEEEET-TTTEEEEEEHHHHHHHHHHTTCSEEEEEETTTTTTCSCC-CHHHHHHHGGGCCSCEEEESCCCSHH
T ss_pred EEecCCCEEEEEC-CCceecchhHHHHHHHHHHcCCCEEEEEeecCCCCcCCC-CHHHHHHHHHHcCCCEEEeCCCCCHH
Confidence 3333 3432 24688899999999999999988887777665 89999999999999999999999999
Q ss_pred HHHHHHHhh---hhhccccCCCCCchHHHHHHHHHhcCCCCCcc
Q psy4398 242 DYGGVFSLN---CAFLRNHYPVEKLPKTILYAHCKYKRFEVPKY 282 (306)
Q Consensus 242 ~~~~~l~~~---v~vGrall~~p~~~~~~l~~~~~~~g~~~~~~ 282 (306)
++.++++.+ +++|++++.+|.. ..++.+|++++|+++..|
T Consensus 214 d~~~~~~~Gadgv~vgsal~~~~~~-~~~~~~~l~~~g~~~~~~ 256 (266)
T 2w6r_A 214 HFLEAFLAGADAALAASVFHFREID-MRELKEYLKKHGVNVRLE 256 (266)
T ss_dssp HHHHHHHHTCSEEEESTTTC------------------------
T ss_pred HHHHHHHcCCHHHHccHHHHcCCCC-HHHHHHHHHHCCCccccc
Confidence 999999864 5999999988733 226678899999875543
No 67
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.26 E-value=1.5e-10 Score=112.27 Aligned_cols=128 Identities=16% Similarity=0.106 Sum_probs=94.5
Q ss_pred CCHHHHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc-cccEEEEeccCCChHHHHHHH
Q psy4398 111 ADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL-SIPVSCKIRVFHNEADTIALC 189 (306)
Q Consensus 111 ~~~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~g~~~~~~~~~a 189 (306)
.+.+.+..+...+++|+|.|+||.+|++ ...+.++++++++.. +.|+.++-- . ..+.+
T Consensus 226 ~~~~~~~~a~~l~~aG~d~I~id~a~g~---------------~~~~~~~v~~i~~~~p~~~Vi~g~v--~----t~e~a 284 (490)
T 4avf_A 226 TGADTGERVAALVAAGVDVVVVDTAHGH---------------SKGVIERVRWVKQTFPDVQVIGGNI--A----TAEAA 284 (490)
T ss_dssp SSTTHHHHHHHHHHTTCSEEEEECSCCS---------------BHHHHHHHHHHHHHCTTSEEEEEEE--C----SHHHH
T ss_pred cccchHHHHHHHhhcccceEEecccCCc---------------chhHHHHHHHHHHHCCCceEEEeee--C----cHHHH
Confidence 3344555555556679999999988764 345678899999887 788888632 1 34668
Q ss_pred HHHHHcCCcEEEEccc------CCCCCCCCCCcHHHHHHHHhhC---CCcEEEecCCCCHHHHHHHHHhhh---hhcccc
Q psy4398 190 KRLEACGIIAIGVHGR------TKAERPRHRNRIEMIRTLTQHL---KIPVIANGGSKEIVDYGGVFSLNC---AFLRNH 257 (306)
Q Consensus 190 ~~l~~~G~d~i~v~~~------~~~~~~~~p~~~~~v~~i~~~~---~ipvia~GGI~s~~~~~~~l~~~v---~vGral 257 (306)
+.+.++|+|+|.+... ++.....+.+.+..+.++++.+ ++|||+.|||.+.+|+.++++.|+ ++|+++
T Consensus 285 ~~l~~aGaD~I~vg~g~Gs~~~t~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kal~~GAd~V~vGs~~ 364 (490)
T 4avf_A 285 KALAEAGADAVKVGIGPGSICTTRIVAGVGVPQISAIANVAAALEGTGVPLIADGGIRFSGDLAKAMVAGAYCVMMGSMF 364 (490)
T ss_dssp HHHHHTTCSEEEECSSCSTTCHHHHHTCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHHHTCSEEEECTTT
T ss_pred HHHHHcCCCEEEECCCCCcCCCccccCCCCccHHHHHHHHHHHhccCCCcEEEeCCCCCHHHHHHHHHcCCCeeeecHHH
Confidence 8899999999998321 1111122345788888888754 799999999999999999998754 999998
Q ss_pred CC
Q psy4398 258 YP 259 (306)
Q Consensus 258 l~ 259 (306)
..
T Consensus 365 ~~ 366 (490)
T 4avf_A 365 AG 366 (490)
T ss_dssp TT
T ss_pred hc
Confidence 75
No 68
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=99.20 E-value=4.3e-11 Score=105.39 Aligned_cols=146 Identities=13% Similarity=0.093 Sum_probs=106.1
Q ss_pred CCceEEEecCCCHHHHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEe---c
Q psy4398 101 KNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKI---R 177 (306)
Q Consensus 101 ~~p~ivql~g~~~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKi---r 177 (306)
+.|+++.=+-.++++.. +.++.|+|+|-+ |..+..+|+.+.++ +.+.+.+-+.+++|. .
T Consensus 73 ~ipvi~~Ggi~~~~~~~---~~~~~Gad~V~l--------------g~~~l~~p~~~~~~-~~~g~~i~~~~d~~~~~v~ 134 (241)
T 1qo2_A 73 AEHIQIGGGIRSLDYAE---KLRKLGYRRQIV--------------SSKVLEDPSFLKSL-REIDVEPVFSLDTRGGRVA 134 (241)
T ss_dssp GGGEEEESSCCSHHHHH---HHHHTTCCEEEE--------------CHHHHHCTTHHHHH-HTTTCEEEEEEEEETTEEC
T ss_pred CCcEEEECCCCCHHHHH---HHHHCCCCEEEE--------------CchHhhChHHHHHH-HHcCCcEEEEEEecCCEEE
Confidence 45666543334554443 333469999966 45566788887777 666533333344431 1
Q ss_pred -cCCChH---HHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHh----
Q psy4398 178 -VFHNEA---DTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSL---- 249 (306)
Q Consensus 178 -~g~~~~---~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~---- 249 (306)
.||... +..++++.+++.|++.|.+|++.+++.+.++ +++.++++++.+++|||++|||.+++++.++++.
T Consensus 135 ~~g~~~~~~~~~~e~~~~~~~~G~~~i~~t~~~~~g~~~g~-~~~~i~~l~~~~~iPvia~GGI~~~~d~~~~~~~~~~~ 213 (241)
T 1qo2_A 135 FKGWLAEEEIDPVSLLKRLKEYGLEEIVHTEIEKDGTLQEH-DFSLTKKIAIEAEVKVLAAGGISSENSLKTAQKVHTET 213 (241)
T ss_dssp CTTCSSCSCCCHHHHHHHHHTTTCCEEEEEETTHHHHTCCC-CHHHHHHHHHHHTCEEEEESSCCSHHHHHHHHHHHHHT
T ss_pred ECCceecCCCCHHHHHHHHHhCCCCEEEEEeecccccCCcC-CHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHhccccc
Confidence 145422 4788999999999999999998776666665 8999999999999999999999999999999876
Q ss_pred -h----hhhccccCCCCCchH
Q psy4398 250 -N----CAFLRNHYPVEKLPK 265 (306)
Q Consensus 250 -~----v~vGrall~~p~~~~ 265 (306)
+ +++||+++.++...+
T Consensus 214 ~G~adgv~vgsal~~~~~~~~ 234 (241)
T 1qo2_A 214 NGLLKGVIVGRAFLEGILTVE 234 (241)
T ss_dssp TTSEEEEEECHHHHTTSSCHH
T ss_pred CCeEeEEEeeHHHHcCCCCHH
Confidence 5 499999998884443
No 69
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=99.19 E-value=5.2e-10 Score=100.00 Aligned_cols=202 Identities=12% Similarity=0.057 Sum_probs=124.7
Q ss_pred cccccccccCCceEEccCCCCCCHHHHHHHHHcCCCEEEecceechhhhhh-hhhhhcccccccccCCCCCceeeecCCC
Q psy4398 21 NANQANINYSNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKT-ERKVNDLLNTIDFVDPLDGSVVFRTCPR 99 (306)
Q Consensus 21 ~~~~~~l~l~n~i~lAPm~~~t~~~~r~~~~~~G~g~~~te~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 99 (306)
+++++|++|+||+++++....+...+.....++|+.++-... ++... ...... +++.+++
T Consensus 3 ~~~i~~~~~~~~~~~~t~g~p~~~~~~~~l~~~Gad~ielg~----pr~~~~g~~~~~---------------~~~~l~~ 63 (264)
T 1xm3_A 3 MLTIGGKSFQSRLLLGTGKYPSFDIQKEAVAVSESDILTFAV----RRMNIFEASQPN---------------FLEQLDL 63 (264)
T ss_dssp CEEETTEEESCCEEEECSCSSCHHHHHHHHHHHTCSEEEEET----TSSTTC----------------------CTTCCG
T ss_pred CeEECCEEecCCCEEEecCCCCHHHHHHHHHHcCCeEEEEcc----cccccCCCCHHH---------------HHHHHHh
Confidence 568999999999999999977666666555577988874332 11100 000111 1222322
Q ss_pred CCCceEEEecC-CCHHHHHHHHHHHhc--CCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEE
Q psy4398 100 EKNKIILQIGT-ADPERALEAAKKVEH--DVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSC 174 (306)
Q Consensus 100 ~~~p~ivql~g-~~~~~~~~aa~~~~~--g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~v 174 (306)
...+++.|..+ .++++....++.+++ +.+.|.+++-. . .. .. .+...++++++++.+ ++.+..
T Consensus 64 ~~~~~~pn~~~~~~~~~~~~f~~~a~~agg~~~i~l~i~~-d------~~--~~---~~e~~~~~~~a~~~~~~g~~vi~ 131 (264)
T 1xm3_A 64 SKYTLLPNTAGASTAEEAVRIARLAKASGLCDMIKVEVIG-C------SR--SL---LPDPVETLKASEQLLEEGFIVLP 131 (264)
T ss_dssp GGSEEEEECTTCSSHHHHHHHHHHHHHTTCCSSEEECCBC-C------TT--TC---CBCHHHHHHHHHHHHHTTCCEEE
T ss_pred cCCeEcCCccccCCHHHHHHHHHHHHHcCCCCeEEEeecC-C------Cc--cc---ccchHHHHHHHHHHHCCCeEEEE
Confidence 34567778765 778876666676654 56777776522 1 00 00 122345566665543 333332
Q ss_pred EeccCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhh---h
Q psy4398 175 KIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLN---C 251 (306)
Q Consensus 175 Kir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~---v 251 (306)
-.. ++. +.++.+++.|+|+|...+.... ...+...++.++++++..++||++.|||.+++++.++++.| +
T Consensus 132 ~~~--~~~----~~a~~~~~~gad~v~~~~~~~G-t~~~~~~~~~l~~i~~~~~iPviv~gGI~t~eda~~~~~~GAdgV 204 (264)
T 1xm3_A 132 YTS--DDV----VLARKLEELGVHAIMPGASPIG-SGQGILNPLNLSFIIEQAKVPVIVDAGIGSPKDAAYAMELGADGV 204 (264)
T ss_dssp EEC--SCH----HHHHHHHHHTCSCBEECSSSTT-CCCCCSCHHHHHHHHHHCSSCBEEESCCCSHHHHHHHHHTTCSEE
T ss_pred EcC--CCH----HHHHHHHHhCCCEEEECCcccC-CCCCCCCHHHHHHHHhcCCCCEEEEeCCCCHHHHHHHHHcCCCEE
Confidence 222 332 3577788899999944232211 11122347888999998899999999999999999999875 5
Q ss_pred hhccccCCC
Q psy4398 252 AFLRNHYPV 260 (306)
Q Consensus 252 ~vGrall~~ 260 (306)
++|++++..
T Consensus 205 iVGSAi~~a 213 (264)
T 1xm3_A 205 LLNTAVSGA 213 (264)
T ss_dssp EESHHHHTS
T ss_pred EEcHHHhCC
Confidence 999999853
No 70
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=99.14 E-value=6e-10 Score=99.82 Aligned_cols=200 Identities=13% Similarity=0.129 Sum_probs=126.6
Q ss_pred ccCCceEEccCCCCCCHH-HHHHHHHcCCCEEEecceechhhhhhhhhhhcccccccccCCCCCceeeecCCCCCCceEE
Q psy4398 28 NYSNKIILAPMVRMNTLP-FRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDGSVVFRTCPREKNKIIL 106 (306)
Q Consensus 28 ~l~n~i~lAPm~~~t~~~-~r~~~~~~G~g~~~te~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~iv 106 (306)
-+.+++.++||.+..+.. ....+.++|+..+++.. ..... . . +.. ....|+++
T Consensus 31 ~id~~~~l~p~~~~~~~~~~~~~~~~~g~~~i~~~~----~~~~~------~-----------~----~~~-~~~~~~~v 84 (273)
T 2qjg_A 31 PMDHGVSNGPIKGLIDIRKTVNDVAEGGANAVLLHK----GIVRH------G-----------H----RGY-GKDVGLII 84 (273)
T ss_dssp ECCHHHHHCSCTTSSSHHHHHHHHHHHTCSEEEECH----HHHHS------C-----------C----CSS-SCCCEEEE
T ss_pred EcccccccCCCcchhhHHHHHHHHHhcCCCEEEeCH----HHHHH------H-----------H----Hhh-cCCCCEEE
Confidence 357788899998888875 44445688998887642 11100 0 0 000 12357888
Q ss_pred EecCCC-----H--HHHHHHHH-HHhcCCCEE--EEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEe
Q psy4398 107 QIGTAD-----P--ERALEAAK-KVEHDVAAI--DINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKI 176 (306)
Q Consensus 107 ql~g~~-----~--~~~~~aa~-~~~~g~d~v--eln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKi 176 (306)
|+.+.. + +.+.+.++ .++.|+|.| .+|.+|+.. . ...+.+.++++..++ .+.|+.+.+
T Consensus 85 ~~~~~~~~~~d~~~~~~~~~v~~a~~~Ga~~v~~~l~~~~~~~--------~---~~~~~~~~v~~~~~~-~g~~viv~~ 152 (273)
T 2qjg_A 85 HLSGGTAISPNPLKKVIVTTVEEAIRMGADAVSIHVNVGSDED--------W---EAYRDLGMIAETCEY-WGMPLIAMM 152 (273)
T ss_dssp ECEECCTTSSSTTCCEECSCHHHHHHTTCSEEEEEEEETSTTH--------H---HHHHHHHHHHHHHHH-HTCCEEEEE
T ss_pred EEcCCCcCCCCcccchHHHHHHHHHHcCCCEEEEEEecCCCCH--------H---HHHHHHHHHHHHHHH-cCCCEEEEe
Confidence 887554 1 11122333 345699999 777777531 0 112344555555543 478888876
Q ss_pred cc-------CCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCC--HHHHHH--
Q psy4398 177 RV-------FHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKE--IVDYGG-- 245 (306)
Q Consensus 177 r~-------g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s--~~~~~~-- 245 (306)
.. +.+.++..++++.+++.|+|+|.++. +.+++.++++++.+++||++.|||++ .+++.+
T Consensus 153 ~~~G~~l~~~~~~~~~~~~a~~a~~~Gad~i~~~~---------~~~~~~l~~i~~~~~ipvva~GGi~~~~~~~~~~~~ 223 (273)
T 2qjg_A 153 YPRGKHIQNERDPELVAHAARLGAELGADIVKTSY---------TGDIDSFRDVVKGCPAPVVVAGGPKTNTDEEFLQMI 223 (273)
T ss_dssp EECSTTCSCTTCHHHHHHHHHHHHHTTCSEEEECC---------CSSHHHHHHHHHHCSSCEEEECCSCCSSHHHHHHHH
T ss_pred CCCCcccCCCCCHhHHHHHHHHHHHcCCCEEEECC---------CCCHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHH
Confidence 21 23445566777999999999999872 35789999999999999999999994 777444
Q ss_pred --HHHh---hhhhccccCCCCCchHH--HHHHHHHh
Q psy4398 246 --VFSL---NCAFLRNHYPVEKLPKT--ILYAHCKY 274 (306)
Q Consensus 246 --~l~~---~v~vGrall~~p~~~~~--~l~~~~~~ 274 (306)
+++. ++.+||+++..|+..+. .+.+.+.+
T Consensus 224 ~~~~~~Ga~gv~vg~~i~~~~~~~~~~~~l~~~~~~ 259 (273)
T 2qjg_A 224 KDAMEAGAAGVAVGRNIFQHDDVVGITRAVCKIVHE 259 (273)
T ss_dssp HHHHHHTCSEEECCHHHHTSSSHHHHHHHHHHHHHH
T ss_pred HHHHHcCCcEEEeeHHhhCCCCHHHHHHHHHHHHhc
Confidence 4444 45999999887643322 45444443
No 71
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=99.14 E-value=4.3e-10 Score=99.35 Aligned_cols=143 Identities=12% Similarity=0.155 Sum_probs=106.5
Q ss_pred ceEEEecCCCHHHHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHH-hcccccEEEEecc---
Q psy4398 103 KIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLI-SNLSIPVSCKIRV--- 178 (306)
Q Consensus 103 p~ivql~g~~~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~-~~~~~pv~vKir~--- 178 (306)
++-+|++|.- ....++.+.+..|+|.|-+| +...++|+++.++.+.+- +.+...+.+|...
T Consensus 75 ~~pl~vGGGI-rs~e~~~~~l~~GadkVii~--------------t~a~~~p~li~e~~~~~g~q~iv~~iD~~~~~~~~ 139 (243)
T 4gj1_A 75 SVNLQVGGGI-RSKEEVKALLDCGVKRVVIG--------------SMAIKDATLCLEILKEFGSEAIVLALDTILKEDYV 139 (243)
T ss_dssp CSEEEEESSC-CCHHHHHHHHHTTCSEEEEC--------------TTTTTCHHHHHHHHHHHCTTTEEEEEEEEESSSEE
T ss_pred CCCeEecccc-ccHHHHHHHHHcCCCEEEEc--------------cccccCCchHHHHHhcccCceEEEEEEEEeCCCCE
Confidence 4557886542 23455556677899999996 455689999999999985 4345566665442
Q ss_pred ----CCCh---HHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhC-CCcEEEecCCCCHHHHHHHHHh-
Q psy4398 179 ----FHNE---ADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHL-KIPVIANGGSKEIVDYGGVFSL- 249 (306)
Q Consensus 179 ----g~~~---~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~-~ipvia~GGI~s~~~~~~~l~~- 249 (306)
+|.. .+..++++.+++.|+..+.+++..+++...++ ++++++.+++.+ ++|||++||+.+.+|.+++.+.
T Consensus 140 v~~~gw~~~~~~~~~~~~~~~~~~g~~eil~t~Id~DGt~~G~-d~~l~~~l~~~~~~ipviasGGv~~~~Dl~~l~~~~ 218 (243)
T 4gj1_A 140 VAVNAWQEASDKKLMEVLDFYSNKGLKHILCTDISKDGTMQGV-NVRLYKLIHEIFPNICIQASGGVASLKDLENLKGIC 218 (243)
T ss_dssp EC--------CCBHHHHHHHHHTTTCCEEEEEETTC-----CC-CHHHHHHHHHHCTTSEEEEESCCCSHHHHHHTTTTC
T ss_pred EEecCceecccchHHHHHHHHhhcCCcEEEeeeecccccccCC-CHHHHHHHHHhcCCCCEEEEcCCCCHHHHHHHHccC
Confidence 3432 23789999999999999999999999999986 999999999987 7999999999999999886432
Q ss_pred -hhhhccccCCCC
Q psy4398 250 -NCAFLRNHYPVE 261 (306)
Q Consensus 250 -~v~vGrall~~p 261 (306)
++.+|+|+|.+-
T Consensus 219 ~gvivg~Al~~g~ 231 (243)
T 4gj1_A 219 SGVIVGKALLDGV 231 (243)
T ss_dssp SEEEECHHHHTTS
T ss_pred chhehHHHHHCCC
Confidence 569999999876
No 72
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.12 E-value=4.9e-10 Score=109.33 Aligned_cols=131 Identities=13% Similarity=0.116 Sum_probs=96.5
Q ss_pred HHHHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc-cccEEEEeccCCChHHHHHHHHH
Q psy4398 113 PERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL-SIPVSCKIRVFHNEADTIALCKR 191 (306)
Q Consensus 113 ~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~g~~~~~~~~~a~~ 191 (306)
++.+..+...++.|+|.|+||.+|. +++...++++++++.+ ++||.+|-- ...+.|+.
T Consensus 254 ~~~~~~a~~~~~aG~d~v~i~~~~G---------------~~~~~~~~i~~i~~~~~~~pvi~~~v------~t~~~a~~ 312 (514)
T 1jcn_A 254 EDDKYRLDLLTQAGVDVIVLDSSQG---------------NSVYQIAMVHYIKQKYPHLQVIGGNV------VTAAQAKN 312 (514)
T ss_dssp TTHHHHHHHHHHTTCSEEEECCSCC---------------CSHHHHHHHHHHHHHCTTCEEEEEEE------CSHHHHHH
T ss_pred hhhHHHHHHHHHcCCCEEEeeccCC---------------cchhHHHHHHHHHHhCCCCceEeccc------chHHHHHH
Confidence 3344444444456999999998762 2356778999999988 889988622 13567899
Q ss_pred HHHcCCcEEEEcc---c---CCCCCCCC---CCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhh---hhccccCC
Q psy4398 192 LEACGIIAIGVHG---R---TKAERPRH---RNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNC---AFLRNHYP 259 (306)
Q Consensus 192 l~~~G~d~i~v~~---~---~~~~~~~~---p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v---~vGrall~ 259 (306)
+.++|+|+|.+.. . ++.....+ +..+..++++++.+++|||+.|||++..++.+++..|+ ++||+++.
T Consensus 313 l~~aGad~I~vg~~~G~~~~t~~~~~~g~~~~~~~~~~~~~~~~~~ipVia~GGI~~~~di~kala~GAd~V~iG~~~l~ 392 (514)
T 1jcn_A 313 LIDAGVDGLRVGMGCGSICITQEVMACGRPQGTAVYKVAEYARRFGVPIIADGGIQTVGHVVKALALGASTVMMGSLLAA 392 (514)
T ss_dssp HHHHTCSEEEECSSCSCCBTTBCCCSCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTT
T ss_pred HHHcCCCEEEECCCCCcccccccccCCCccchhHHHHHHHHHhhCCCCEEEECCCCCHHHHHHHHHcCCCeeeECHHHHc
Confidence 9999999999831 1 11111111 23578889999999999999999999999999999864 99999998
Q ss_pred CCCch
Q psy4398 260 VEKLP 264 (306)
Q Consensus 260 ~p~~~ 264 (306)
.|+.+
T Consensus 393 ~~e~~ 397 (514)
T 1jcn_A 393 TTEAP 397 (514)
T ss_dssp STTSS
T ss_pred CCcCC
Confidence 87443
No 73
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=99.09 E-value=1.4e-09 Score=96.07 Aligned_cols=142 Identities=21% Similarity=0.298 Sum_probs=104.5
Q ss_pred ceEEEecCCCHHHHHHHHHHHhc-CCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEeccCCC
Q psy4398 103 KIILQIGTADPERALEAAKKVEH-DVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFHN 181 (306)
Q Consensus 103 p~ivql~g~~~~~~~~aa~~~~~-g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~ 181 (306)
-+|..+ .+ .+-|+.+++ |+.+|...-+||..... . -|.+-+++|+. |+++++++.+||+.|.+.|.
T Consensus 13 ~vimdv--~~----~eqa~iae~aGa~av~~l~~~p~d~r~-~-gGv~Rm~dp~~----I~~I~~aVsIPVm~k~righ- 79 (291)
T 3o07_A 13 GVIMDV--VT----PEQAKIAEKSGACAVMALESIPADMRK-S-GKVCRMSDPKM----IKDIMNSVSIPVMAKVRIGH- 79 (291)
T ss_dssp CEEEEE--SS----HHHHHHHHHHTCSEEEECSSCHHHHHT-T-TCCCCCCCHHH----HHHHHTTCSSCEEEEEETTC-
T ss_pred Ceeeec--CC----HHHHHHHHHhCchhhhhccCCCchhhh-c-CCccccCCHHH----HHHHHHhCCCCeEEEEecCc-
Confidence 366666 22 344566654 99999999999986542 2 25567788886 45567888999999999754
Q ss_pred hHHHHHHHHHHHHcCCcEEEEcccC-----------------------------------------CCC-----------
Q psy4398 182 EADTIALCKRLEACGIIAIGVHGRT-----------------------------------------KAE----------- 209 (306)
Q Consensus 182 ~~~~~~~a~~l~~~G~d~i~v~~~~-----------------------------------------~~~----------- 209 (306)
..-|+.++++|+|+|.-+... ...
T Consensus 80 ----~~EAqilea~GaD~IDesevltpad~~~~I~k~~f~vpfv~~~~~l~EAlrri~eGA~mIrTtge~gtg~v~~av~ 155 (291)
T 3o07_A 80 ----FVEAQIIEALEVDYIDESEVLTPADWTHHIEKDKFKVPFVCGAKDLGEALRRINEGAAMIRTKGEAGTGDVSEAVK 155 (291)
T ss_dssp ----HHHHHHHHHTTCSEEEEETTSCCSCSSCCCCGGGCSSCEEEEESSHHHHHHHHHHTCSEEEECCCTTSCCTHHHHH
T ss_pred ----HHHHHHHHHcCCCEEecccCCCHHHHHHHhhhhcCCCcEEeeCCCHHHHHHHHHCCCCEEEecCcCCCccHHHHHH
Confidence 566788888999998743210 000
Q ss_pred -------------CC-----------CCCCcHHHHHHHHhhCCCcE--EEecCCCCHHHHHHHHHh---hhhhccccCCC
Q psy4398 210 -------------RP-----------RHRNRIEMIRTLTQHLKIPV--IANGGSKEIVDYGGVFSL---NCAFLRNHYPV 260 (306)
Q Consensus 210 -------------~~-----------~~p~~~~~v~~i~~~~~ipv--ia~GGI~s~~~~~~~l~~---~v~vGrall~~ 260 (306)
.+ ...++|++++++++..++|| |++|||.|++++..+++. ++++||+++..
T Consensus 156 h~r~~~~~i~~l~g~~t~~el~~~a~~~~ad~elI~~Ike~~~IPVV~IAnGGI~TpedA~~~le~GaDGVmVGrAI~~s 235 (291)
T 3o07_A 156 HIRRITEEIKACQQLKSEDDIAKVAEEMRVPVSLLKDVLEKGKLPVVNFAAGGVATPADAALLMQLGCDGVFVGSGIFKS 235 (291)
T ss_dssp HHHHHHHHHHHHHTCCCHHHHHHHHHHHTSCHHHHHHHHHHTSCSSCEEBCSSCCSHHHHHHHHHTTCSCEEECGGGGGS
T ss_pred HHHHHHHHHHHHHcCCCHHHhhhcccccCCCHHHHHHHHHccCCCEEEecCCCCCCHHHHHHHHHhCCCEEEEchHHhCC
Confidence 02 01357999999999999998 569999999999999986 45999999874
Q ss_pred C
Q psy4398 261 E 261 (306)
Q Consensus 261 p 261 (306)
+
T Consensus 236 ~ 236 (291)
T 3o07_A 236 S 236 (291)
T ss_dssp S
T ss_pred C
Confidence 3
No 74
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=99.09 E-value=9e-10 Score=99.92 Aligned_cols=138 Identities=22% Similarity=0.257 Sum_probs=94.2
Q ss_pred HHHHHHHhc-CCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEeccCCChH------------
Q psy4398 117 LEAAKKVEH-DVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFHNEA------------ 183 (306)
Q Consensus 117 ~~aa~~~~~-g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~------------ 183 (306)
.+.|+.+++ |+++|... ||.+...+...|.+.+++|+.+.++. +++.+||..|.+.||..+
T Consensus 27 ~e~A~~ae~aGA~aI~~l--~~v~~d~~~~~G~arm~~p~~i~~I~----~av~iPV~~K~rig~~~e~qilea~GaD~I 100 (330)
T 2yzr_A 27 VEQAQIAEEAGAVAVMAL--ERVPADIRAAGGVARMSDPALIEEIM----DAVSIPVMAKCRIGHTTEALVLEAIGVDMI 100 (330)
T ss_dssp HHHHHHHHHHTCSEEEEC--SSCHHHHC--CCCCCCCCHHHHHHHH----HHCSSCEEEEEETTCHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHcCCCEEEec--CCccccccCCcchhhcCCHHHHHHHH----HhcCCCeEEEEeecchHHHHHHHHcCCCEE
Confidence 556776765 99999443 27776677777888999999877775 467899999999877200
Q ss_pred -----------------------------HHHHHHHHHHHcCCcEEEEcc--------------cC------------CC
Q psy4398 184 -----------------------------DTIALCKRLEACGIIAIGVHG--------------RT------------KA 208 (306)
Q Consensus 184 -----------------------------~~~~~a~~l~~~G~d~i~v~~--------------~~------------~~ 208 (306)
+..+.++++ +.|++.|..|+ |+ .+
T Consensus 101 d~s~~l~p~d~~~~i~k~~~~~~~~~~a~~lgea~r~~-~~Ga~~i~t~ge~g~~~~ve~v~H~r~~~~~~~~~s~~~~~ 179 (330)
T 2yzr_A 101 DESEVLTQADPFFHIYKKKFNVPFVCGARNLGEAVRRI-WEGAAMIRTKGEAGTGNIVEAVRHMRLMNEAIAQLQRMTDE 179 (330)
T ss_dssp EEETTSCCSCSSCCCCGGGCSSCEEEECSSHHHHHHHH-HHTCSEEEECCCTTSCCTHHHHHHHHHHHHHHHHHTTSCHH
T ss_pred ehhccCCHHHHHHHhhhhhcccchhhccccHHHHHHHH-hcCcceeeccCCCCcccchhHHHHHHHHHHHHHHhccCCHH
Confidence 133444444 45555555555 21 00
Q ss_pred C----------CC----------CC---------------------CCcHHHHHHHHhhCCCcE--EEecCCCCHHHHHH
Q psy4398 209 E----------RP----------RH---------------------RNRIEMIRTLTQHLKIPV--IANGGSKEIVDYGG 245 (306)
Q Consensus 209 ~----------~~----------~~---------------------p~~~~~v~~i~~~~~ipv--ia~GGI~s~~~~~~ 245 (306)
+ .| .| +..+++++++++..++|| |++|||.|++++..
T Consensus 180 El~~~A~~~gadyv~~~~~vt~~~G~~~r~Lg~G~Vf~T~TK~~~~~~~lell~~i~~~~~IPVV~VAeGGI~Tpeda~~ 259 (330)
T 2yzr_A 180 EVYGVAKFYANRYAELAKTVREGMGLPATVLENEPIYEGFTLAEIIDGLYEVLLEVKKLGRLPVVNFAAGGVATPADAAL 259 (330)
T ss_dssp HHHHHHHHHHGGGGHHHHHHHHHTTSCSCCCTTSEEETTEEHHHHHHHHHHHHHHHHHHTSCSSEEEECSCCCSHHHHHH
T ss_pred HHHHHHHHcCCCEeecccchhhhccccccccccccccCCCcccCCCcchHHHHHHHHHhCCCCeEEEEECCCCCHHHHHH
Confidence 0 01 00 011288889999889998 69999999999999
Q ss_pred HHHhh---hhhccccCC--CC
Q psy4398 246 VFSLN---CAFLRNHYP--VE 261 (306)
Q Consensus 246 ~l~~~---v~vGrall~--~p 261 (306)
+++.| +++|++++. ||
T Consensus 260 ~l~~GaDgV~VGsaI~~a~dP 280 (330)
T 2yzr_A 260 MMQLGSDGVFVGSGIFKSENP 280 (330)
T ss_dssp HHHTTCSCEEESHHHHTSSCH
T ss_pred HHHcCcCEEeeHHHHhcCCCH
Confidence 99975 599999984 55
No 75
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=99.05 E-value=3.7e-09 Score=99.37 Aligned_cols=152 Identities=12% Similarity=0.113 Sum_probs=117.3
Q ss_pred CceEEEecCCCHHHHHHHHHHHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc-cccEEEEeccC
Q psy4398 102 NKIILQIGTADPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL-SIPVSCKIRVF 179 (306)
Q Consensus 102 ~p~ivql~g~~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~g 179 (306)
.|+...+++.+++++.++|+++. +||+.|++|+|| +++...++++++|+++ ++++.++...+
T Consensus 137 v~~~~~~~~~~~e~~~~~a~~~~~~Gf~~iKik~g~----------------~~~~~~e~v~avr~a~gd~~l~vD~n~~ 200 (384)
T 2pgw_A 137 VGYFYFLQGETAEELARDAAVGHAQGERVFYLKVGR----------------GEKLDLEITAAVRGEIGDARLRLDANEG 200 (384)
T ss_dssp EEBCEECCCSSHHHHHHHHHHHHHTTCCEEEEECCS----------------CHHHHHHHHHHHHTTSTTCEEEEECTTC
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHcCCCEEEECcCC----------------CHHHHHHHHHHHHHHcCCcEEEEecCCC
Confidence 35555566678999999988775 599999999774 5788899999999998 57888888778
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhh----hhcc
Q psy4398 180 HNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNC----AFLR 255 (306)
Q Consensus 180 ~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v----~vGr 255 (306)
|+.+++.++++.+++.|+++|. ++. .+.+++..+++++.+++||++.+.+.++++++++++.+. ++..
T Consensus 201 ~~~~~a~~~~~~l~~~~i~~iE-------qP~-~~~~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~~~d~v~ik~ 272 (384)
T 2pgw_A 201 WSVHDAINMCRKLEKYDIEFIE-------QPT-VSWSIPAMAHVREKVGIPIVADQAAFTLYDVYEICRQRAADMICIGP 272 (384)
T ss_dssp CCHHHHHHHHHHHGGGCCSEEE-------CCS-CTTCHHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECH
T ss_pred CCHHHHHHHHHHHHhcCCCEEe-------CCC-ChhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEcc
Confidence 9999999999999999999885 222 356899999999999999999999999999999997532 2222
Q ss_pred ccCCCCCchHHHHHHHHHhcCCC
Q psy4398 256 NHYPVEKLPKTILYAHCKYKRFE 278 (306)
Q Consensus 256 all~~p~~~~~~l~~~~~~~g~~ 278 (306)
...-++ ..-+.+.++.+++|++
T Consensus 273 ~~~GGi-t~~~~i~~~A~~~g~~ 294 (384)
T 2pgw_A 273 REIGGI-QPMMKAAAVAEAAGLK 294 (384)
T ss_dssp HHHTSH-HHHHHHHHHHHHTTCC
T ss_pred hhhCCH-HHHHHHHHHHHHCCCe
Confidence 111111 1122556667777776
No 76
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=99.05 E-value=8.9e-08 Score=83.98 Aligned_cols=207 Identities=12% Similarity=0.105 Sum_probs=140.9
Q ss_pred cccccccccCCceEEccCCCCCCHHHHHHHHHcCCCEEEecceechhhhhhhhhhhcccccccccCCCCCceeeecCCCC
Q psy4398 21 NANQANINYSNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDGSVVFRTCPRE 100 (306)
Q Consensus 21 ~~~~~~l~l~n~i~lAPm~~~t~~~~r~~~~~~G~g~~~te~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 100 (306)
+.+|+|.+|..|+++-.+--.+...++......|+.++..-.-..+ .. ......+ +.+.++..
T Consensus 10 ~l~i~~~~f~SRl~~Gtgky~~~~~~~~a~~asg~e~vtva~rR~~-~~-~~~~~~~---------------~~~~i~~~ 72 (265)
T 1wv2_A 10 PFVIAGRTYGSRLLVGTGKYKDLDETRRAIEASGAEIVTVAVRRTN-IG-QNPDEPN---------------LLDVIPPD 72 (265)
T ss_dssp CEEETTEEESCCEEECCSCSSSHHHHHHHHHHSCCSEEEEEGGGCC-C-----------------------------CTT
T ss_pred CeEECCEEeecceEEecCCCCCHHHHHHHHHHhCCCeEEEEEEeec-cc-cCCCcch---------------HHhhhhhc
Confidence 4789999999999998877444445666666789877665431110 00 0000011 22333334
Q ss_pred CCceEEEec-CCCHHHHHHHHHHHhc---CCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEe
Q psy4398 101 KNKIILQIG-TADPERALEAAKKVEH---DVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKI 176 (306)
Q Consensus 101 ~~p~ivql~-g~~~~~~~~aa~~~~~---g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKi 176 (306)
+..+..|-. +.+.++....|+.+.+ |-+-|-|..-.-+ . .++.|+....+..+.+.+. ++.+..-+
T Consensus 73 ~~~~lpNTag~~ta~eAv~~a~lare~~~~~~~iKlEv~~d~------~---~llpD~~~tv~aa~~L~~~-Gf~Vlpy~ 142 (265)
T 1wv2_A 73 RYTILPNTAGCYDAVEAVRTCRLARELLDGHNLVKLEVLADQ------K---TLFPNVVETLKAAEQLVKD-GFDVMVYT 142 (265)
T ss_dssp TSEEEEECTTCCSHHHHHHHHHHHHTTTTSCCEEEECCBSCT------T---TCCBCHHHHHHHHHHHHTT-TCEEEEEE
T ss_pred CCEECCcCCCCCCHHHHHHHHHHHHHHcCCCCeEEEEeecCc------c---ccCcCHHHHHHHHHHHHHC-CCEEEEEe
Confidence 566777765 4789999999998876 7788777654322 1 3556777766666666443 66666556
Q ss_pred ccCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhh---hhh
Q psy4398 177 RVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLN---CAF 253 (306)
Q Consensus 177 r~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~---v~v 253 (306)
. .+ ..+++++++.|++.|.-.+..... ..+..++++++++++..++|||+.|||.+++|+..+++.| |.+
T Consensus 143 ~--dd----~~~akrl~~~G~~aVmPlg~pIGs-G~Gi~~~~lI~~I~e~~~vPVI~eGGI~TPsDAa~AmeLGAdgVlV 215 (265)
T 1wv2_A 143 S--DD----PIIARQLAEIGCIAVMPLAGLIGS-GLGICNPYNLRIILEEAKVPVLVDAGVGTASDAAIAMELGCEAVLM 215 (265)
T ss_dssp C--SC----HHHHHHHHHSCCSEEEECSSSTTC-CCCCSCHHHHHHHHHHCSSCBEEESCCCSHHHHHHHHHHTCSEEEE
T ss_pred C--CC----HHHHHHHHHhCCCEEEeCCccCCC-CCCcCCHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHHHcCCCEEEE
Confidence 6 33 688999999999999776653322 2234578999999999999999999999999999999985 499
Q ss_pred ccccCC--CC
Q psy4398 254 LRNHYP--VE 261 (306)
Q Consensus 254 Grall~--~p 261 (306)
|+++.. ||
T Consensus 216 gSAI~~a~dP 225 (265)
T 1wv2_A 216 NTAIAHAKDP 225 (265)
T ss_dssp SHHHHTSSSH
T ss_pred ChHHhCCCCH
Confidence 999864 56
No 77
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=99.02 E-value=9.3e-09 Score=95.73 Aligned_cols=155 Identities=12% Similarity=0.029 Sum_probs=118.6
Q ss_pred CCceEEEecCCCHHHHHHHHHHHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEec
Q psy4398 101 KNKIILQIGTADPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIR 177 (306)
Q Consensus 101 ~~p~ivql~g~~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir 177 (306)
..|+..+++..+++++.+.++++. +||+.|++|+||+ +++...++++++|+++ ++++.++..
T Consensus 133 ~vp~~~~~g~~~~~~~~~~a~~~~~~Gf~~iKik~g~~---------------~~~~~~e~v~avr~a~g~~~~l~vDan 197 (359)
T 1mdl_A 133 PVQAYDSHSLDGVKLATERAVTAAELGFRAVKTRIGYP---------------ALDQDLAVVRSIRQAVGDDFGIMVDYN 197 (359)
T ss_dssp CEEEEEECCSCHHHHHHHHHHHHHHTTCSEEEEECCCS---------------SHHHHHHHHHHHHHHHCSSSEEEEECT
T ss_pred CeeeeeecCCCCHHHHHHHHHHHHHcCCCEEEEecCCC---------------CHHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 345555543367889998888775 5999999998872 4677789999999988 588999988
Q ss_pred cCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhh----hh
Q psy4398 178 VFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNC----AF 253 (306)
Q Consensus 178 ~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v----~v 253 (306)
.+|+.+++.++++.+++.|+++|- ++. .+.+++..+++++.+++||++.+.+.+.++++++++.+. ++
T Consensus 198 ~~~~~~~a~~~~~~l~~~~i~~iE-------~P~-~~~~~~~~~~l~~~~~iPI~~de~~~~~~~~~~~i~~~~~d~v~i 269 (359)
T 1mdl_A 198 QSLDVPAAIKRSQALQQEGVTWIE-------EPT-LQHDYEGHQRIQSKLNVPVQMGENWLGPEEMFKALSIGACRLAMP 269 (359)
T ss_dssp TCSCHHHHHHHHHHHHHHTCSCEE-------CCS-CTTCHHHHHHHHHTCSSCEEECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred CCCCHHHHHHHHHHHHHhCCCeEE-------CCC-ChhhHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEee
Confidence 899999999999999999999873 222 346899999999999999999999999999999988632 22
Q ss_pred ccccCCCCCchHHHHHHHHHhcCCCC
Q psy4398 254 LRNHYPVEKLPKTILYAHCKYKRFEV 279 (306)
Q Consensus 254 Grall~~p~~~~~~l~~~~~~~g~~~ 279 (306)
-....-+ ...-+.+.++.+++|++.
T Consensus 270 k~~~~GG-i~~~~~i~~~A~~~g~~~ 294 (359)
T 1mdl_A 270 DAMKIGG-VTGWIRASALAQQFGIPM 294 (359)
T ss_dssp BTTTTTH-HHHHHHHHHHHHHTTCCB
T ss_pred cchhhCC-HHHHHHHHHHHHHcCCeE
Confidence 2111111 112236777888889883
No 78
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=98.97 E-value=1.2e-08 Score=95.72 Aligned_cols=149 Identities=6% Similarity=-0.035 Sum_probs=114.9
Q ss_pred CceEEEecCCCHHHHHHHHHHHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEecc
Q psy4398 102 NKIILQIGTADPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIRV 178 (306)
Q Consensus 102 ~p~ivql~g~~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~ 178 (306)
.|+...+...+++++.++|+++. +||+.|++|+++ +++...++++++|+++ ++++.++...
T Consensus 135 v~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g~----------------~~~~~~e~v~avr~a~g~d~~l~vDan~ 198 (379)
T 2rdx_A 135 APMYRVAPQRSEAETRAELARHRAAGYRQFQIKVGA----------------DWQSDIDRIRACLPLLEPGEKAMADANQ 198 (379)
T ss_dssp EEBCEECCCSCSHHHHHHHHHHHHTTCCEEEEECCS----------------CHHHHHHHHHHHGGGSCTTCEEEEECTT
T ss_pred eeEEEEecCCCHHHHHHHHHHHHHcCCCEEEEeccC----------------CHHHHHHHHHHHHHhcCCCCEEEEECCC
Confidence 34544554467899999888775 599999999875 4678889999999998 4889999888
Q ss_pred CCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhh----hhc
Q psy4398 179 FHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNC----AFL 254 (306)
Q Consensus 179 g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v----~vG 254 (306)
+|+.+++.++++.+++.|+ +|- ++. + +++..+++++.+++||++.+.+.+.++++++++.+. ++-
T Consensus 199 ~~~~~~a~~~~~~l~~~~i-~iE-------~P~--~-~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~~~d~v~ik 267 (379)
T 2rdx_A 199 GWRVDNAIRLARATRDLDY-ILE-------QPC--R-SYEECQQVRRVADQPMKLDECVTGLHMAQRIVADRGAEICCLK 267 (379)
T ss_dssp CSCHHHHHHHHHHTTTSCC-EEE-------CCS--S-SHHHHHHHHTTCCSCEEECTTCCSHHHHHHHHHHTCCSEEEEE
T ss_pred CCCHHHHHHHHHHHHhCCe-EEe-------CCc--C-CHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEe
Confidence 9999999999999999999 763 222 2 899999999999999999999999999999988632 222
Q ss_pred cccCCCCCchHHHHHHHHHhcCCC
Q psy4398 255 RNHYPVEKLPKTILYAHCKYKRFE 278 (306)
Q Consensus 255 rall~~p~~~~~~l~~~~~~~g~~ 278 (306)
....-+ ...-+.+.++.+++|++
T Consensus 268 ~~~~GG-it~~~~i~~~A~~~g~~ 290 (379)
T 2rdx_A 268 ISNLGG-LSKARRTRDFLIDNRMP 290 (379)
T ss_dssp TTTTTS-HHHHHHHHHHHHHTTCC
T ss_pred ccccCC-HHHHHHHHHHHHHcCCe
Confidence 221111 12223666777788877
No 79
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=98.95 E-value=2.7e-09 Score=92.59 Aligned_cols=97 Identities=15% Similarity=0.168 Sum_probs=70.9
Q ss_pred HHHHHHHHHHhcc-cccEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcc--cCCCCCCC--CCCcHHHHHHHHhhCCCc
Q psy4398 156 IACNILTTLISNL-SIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHG--RTKAERPR--HRNRIEMIRTLTQHLKIP 230 (306)
Q Consensus 156 ~~~eiv~~v~~~~-~~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~--~~~~~~~~--~p~~~~~v~~i~~~~~ip 230 (306)
.+.++++.+++.+ +.++.+.+. + .+.++.+++.|+|+|.+.. .+...... ...+++.++++++.+++|
T Consensus 105 ~~~~~i~~~~~~~~~~~v~~~~~---t----~~e~~~~~~~G~d~i~~~~~g~t~~~~~~~~~~~~~~~~~~~~~~~~ip 177 (223)
T 1y0e_A 105 TLDELVSYIRTHAPNVEIMADIA---T----VEEAKNAARLGFDYIGTTLHGYTSYTQGQLLYQNDFQFLKDVLQSVDAK 177 (223)
T ss_dssp CHHHHHHHHHHHCTTSEEEEECS---S----HHHHHHHHHTTCSEEECTTTTSSTTSTTCCTTHHHHHHHHHHHHHCCSE
T ss_pred CHHHHHHHHHHhCCCceEEecCC---C----HHHHHHHHHcCCCEEEeCCCcCcCCCCCCCCCcccHHHHHHHHhhCCCC
Confidence 4567788887765 566666544 2 2235668899999998643 22221111 234788999999999999
Q ss_pred EEEecCCCCHHHHHHHHHhh---hhhccccCC
Q psy4398 231 VIANGGSKEIVDYGGVFSLN---CAFLRNHYP 259 (306)
Q Consensus 231 via~GGI~s~~~~~~~l~~~---v~vGrall~ 259 (306)
|++.|||.|.+++.++++.| +++||+++.
T Consensus 178 via~GGI~~~~~~~~~~~~Gad~v~vG~al~~ 209 (223)
T 1y0e_A 178 VIAEGNVITPDMYKRVMDLGVHCSVVGGAITR 209 (223)
T ss_dssp EEEESSCCSHHHHHHHHHTTCSEEEECHHHHC
T ss_pred EEEecCCCCHHHHHHHHHcCCCEEEEChHHcC
Confidence 99999999999999999875 499999875
No 80
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=98.95 E-value=3.6e-09 Score=92.71 Aligned_cols=115 Identities=13% Similarity=0.131 Sum_probs=88.4
Q ss_pred HHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEeccCCChHHHHHHHHHHHHcCCcEE
Q psy4398 121 KKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAI 200 (306)
Q Consensus 121 ~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i 200 (306)
...+.|+|.|-|+..+ ..+|+.+.++++.+++. +.++.+.+. ..+.++.+++.|+|+|
T Consensus 96 ~~~~~Gad~V~l~~~~--------------~~~p~~l~~~i~~~~~~-g~~v~~~v~-------t~eea~~a~~~Gad~I 153 (232)
T 3igs_A 96 ALAQAGAAIIAVDGTA--------------RQRPVAVEALLARIHHH-HLLTMADCS-------SVDDGLACQRLGADII 153 (232)
T ss_dssp HHHHHTCSEEEEECCS--------------SCCSSCHHHHHHHHHHT-TCEEEEECC-------SHHHHHHHHHTTCSEE
T ss_pred HHHHcCCCEEEECccc--------------cCCHHHHHHHHHHHHHC-CCEEEEeCC-------CHHHHHHHHhCCCCEE
Confidence 3345699999886443 23556778888888764 778888776 3567788899999999
Q ss_pred EE--cccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhh---hhhccccCC
Q psy4398 201 GV--HGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLN---CAFLRNHYP 259 (306)
Q Consensus 201 ~v--~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~---v~vGrall~ 259 (306)
.+ ++.+..... ...++++++++++. ++|||+.|||.|++++.++++.| +++|++++.
T Consensus 154 g~~~~g~t~~~~~-~~~~~~~i~~l~~~-~ipvIA~GGI~t~~d~~~~~~~GadgV~VGsal~~ 215 (232)
T 3igs_A 154 GTTMSGYTTPDTP-EEPDLPLVKALHDA-GCRVIAEGRYNSPALAAEAIRYGAWAVTVGSAITR 215 (232)
T ss_dssp ECTTTTSSSSSCC-SSCCHHHHHHHHHT-TCCEEEESCCCSHHHHHHHHHTTCSEEEECHHHHC
T ss_pred EEcCccCCCCCCC-CCCCHHHHHHHHhc-CCcEEEECCCCCHHHHHHHHHcCCCEEEEehHhcC
Confidence 65 344433222 34589999999998 99999999999999999999875 599999884
No 81
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=98.92 E-value=4.1e-09 Score=92.16 Aligned_cols=118 Identities=15% Similarity=0.093 Sum_probs=89.6
Q ss_pred HHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEeccCCChHHHHHHHHHHHHcCC
Q psy4398 118 EAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGI 197 (306)
Q Consensus 118 ~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~a~~l~~~G~ 197 (306)
++....+.|+|.|-++..+ ..+|+.+.++++.+++. +.++.+.+. +.+.++.++++|+
T Consensus 93 ~i~~~~~aGad~I~l~~~~--------------~~~p~~l~~~i~~~~~~-g~~v~~~v~-------t~eea~~a~~~Ga 150 (229)
T 3q58_A 93 DVDALAQAGADIIAFDASF--------------RSRPVDIDSLLTRIRLH-GLLAMADCS-------TVNEGISCHQKGI 150 (229)
T ss_dssp HHHHHHHHTCSEEEEECCS--------------SCCSSCHHHHHHHHHHT-TCEEEEECS-------SHHHHHHHHHTTC
T ss_pred HHHHHHHcCCCEEEECccc--------------cCChHHHHHHHHHHHHC-CCEEEEecC-------CHHHHHHHHhCCC
Confidence 3333345699999887543 13456778888888774 788888776 3567788899999
Q ss_pred cEEEE--cccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhh---hhhccccCC
Q psy4398 198 IAIGV--HGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLN---CAFLRNHYP 259 (306)
Q Consensus 198 d~i~v--~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~---v~vGrall~ 259 (306)
|+|.+ ++.+.... ....++++++++++. ++|||+.|||.|++++.++++.| +++|+++..
T Consensus 151 d~Ig~~~~g~t~~~~-~~~~~~~li~~l~~~-~ipvIA~GGI~t~~d~~~~~~~GadgV~VGsai~~ 215 (229)
T 3q58_A 151 EFIGTTLSGYTGPIT-PVEPDLAMVTQLSHA-GCRVIAEGRYNTPALAANAIEHGAWAVTVGSAITR 215 (229)
T ss_dssp SEEECTTTTSSSSCC-CSSCCHHHHHHHHTT-TCCEEEESSCCSHHHHHHHHHTTCSEEEECHHHHC
T ss_pred CEEEecCccCCCCCc-CCCCCHHHHHHHHHc-CCCEEEECCCCCHHHHHHHHHcCCCEEEEchHhcC
Confidence 99965 34443322 234589999999998 99999999999999999999875 499999873
No 82
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=98.92 E-value=2.4e-08 Score=93.33 Aligned_cols=143 Identities=10% Similarity=0.058 Sum_probs=113.7
Q ss_pred CHHHHHHHHHHHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEeccCCChHHHHHH
Q psy4398 112 DPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIRVFHNEADTIAL 188 (306)
Q Consensus 112 ~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~~ 188 (306)
+++++.+.++++. +||+.|.|++||+ +++...++++++|+++ ++++.++...+|+.+++.++
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~iKik~g~~---------------~~~~~~e~v~avr~a~G~d~~l~vDan~~~~~~~a~~~ 210 (371)
T 2ovl_A 146 PVADLKTQADRFLAGGFRAIKMKVGRP---------------DLKEDVDRVSALREHLGDSFPLMVDANMKWTVDGAIRA 210 (371)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEECCCS---------------SHHHHHHHHHHHHHHHCTTSCEEEECTTCSCHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCC---------------CHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHH
Confidence 7999998888775 5999999998873 3567788999999988 58899999889999999999
Q ss_pred HHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhh----hhccccCCCCCch
Q psy4398 189 CKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNC----AFLRNHYPVEKLP 264 (306)
Q Consensus 189 a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v----~vGrall~~p~~~ 264 (306)
++.+++.|+++|- ++. .+.+++..+++++.+++||++.+.+.+.++++++++.+. ++-....-+ ...
T Consensus 211 ~~~l~~~~i~~iE-------qP~-~~~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GG-i~~ 281 (371)
T 2ovl_A 211 ARALAPFDLHWIE-------EPT-IPDDLVGNARIVRESGHTIAGGENLHTLYDFHNAVRAGSLTLPEPDVSNIGG-YTT 281 (371)
T ss_dssp HHHHGGGCCSEEE-------CCS-CTTCHHHHHHHHHHHCSCEEECTTCCSHHHHHHHHHHTCCSEECCCTTTTTS-HHH
T ss_pred HHHHHhcCCCEEE-------CCC-CcccHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEeeCccccCC-HHH
Confidence 9999999999873 222 346899999999999999999999999999999988632 332221111 112
Q ss_pred HHHHHHHHHhcCCC
Q psy4398 265 KTILYAHCKYKRFE 278 (306)
Q Consensus 265 ~~~l~~~~~~~g~~ 278 (306)
-+.+.++.+++|++
T Consensus 282 ~~~i~~~A~~~gi~ 295 (371)
T 2ovl_A 282 FRKVAALAEANNML 295 (371)
T ss_dssp HHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHcCCe
Confidence 23677888899988
No 83
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=98.90 E-value=3.3e-09 Score=93.61 Aligned_cols=93 Identities=15% Similarity=0.095 Sum_probs=75.7
Q ss_pred EEEEeccCCCh--HHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHh
Q psy4398 172 VSCKIRVFHNE--ADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSL 249 (306)
Q Consensus 172 v~vKir~g~~~--~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~ 249 (306)
..||++.++.. .+..++++.++++|+++|++++.+..+... ..++++++++++.+++||+++|||+|+++++++++.
T Consensus 22 ~~v~~~~~~~~~~~~~~~~a~~~~~~G~~~i~v~d~~~~~~~~-~~~~~~i~~i~~~~~ipvi~~Ggi~~~~~~~~~l~~ 100 (247)
T 3tdn_A 22 FMVFTYSGKKNTGILLRDWVVEVEKRGAGEILLTSIDRDGTKS-GYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLR 100 (247)
T ss_dssp EEEEETTTTEEEEEEHHHHHHHHHHTTCSEEEEEETTTTTCSS-CCCHHHHHHHGGGCCSCEEEESCCCSHHHHHHHHHT
T ss_pred EEEEEcCCeecCCCCHHHHHHHHHHcCCCEEEEEecCcccCCC-cccHHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHc
Confidence 35566643322 358999999999999999999876554443 358999999999999999999999999999999987
Q ss_pred h---hhhccccCCCCCchH
Q psy4398 250 N---CAFLRNHYPVEKLPK 265 (306)
Q Consensus 250 ~---v~vGrall~~p~~~~ 265 (306)
+ +.+||+++.||.+..
T Consensus 101 Gad~V~ig~~~l~dp~~~~ 119 (247)
T 3tdn_A 101 GADKVSINTAAVENPSLIT 119 (247)
T ss_dssp TCSEECCSHHHHHCTHHHH
T ss_pred CCCeeehhhHHhhChHHHH
Confidence 5 499999999995543
No 84
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=98.89 E-value=1.6e-08 Score=95.24 Aligned_cols=151 Identities=8% Similarity=-0.020 Sum_probs=116.3
Q ss_pred CceEEEec-CCCHHHHHHHHHHHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEec
Q psy4398 102 NKIILQIG-TADPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIR 177 (306)
Q Consensus 102 ~p~ivql~-g~~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir 177 (306)
.|+..+++ ..++++|.+.++++. +||+.|+||+|+ .+++. .++++++|+++ ++++.++..
T Consensus 153 vp~~~~~g~~~~~e~~~~~a~~~~~~Gf~~vKik~g~---------------~~~~~-~e~v~avr~a~g~d~~l~vDan 216 (388)
T 2nql_A 153 FPAYVSGLPERTLKARGELAKYWQDRGFNAFKFATPV---------------ADDGP-AAEIANLRQVLGPQAKIAADMH 216 (388)
T ss_dssp EEEEEECCCCSSHHHHHHHHHHHHHTTCCEEEEEGGG---------------CTTCH-HHHHHHHHHHHCTTSEEEEECC
T ss_pred eEeeEEeCCCCCHHHHHHHHHHHHHhCCCEEEEeCCC---------------CChHH-HHHHHHHHHHhCCCCEEEEECC
Confidence 45555554 468999999888775 599999999775 24667 89999999987 588999988
Q ss_pred cCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhh----hh
Q psy4398 178 VFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNC----AF 253 (306)
Q Consensus 178 ~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v----~v 253 (306)
.+|+.+++.++++.+++.|+++|. ++. .+.+++..+++++.+++||++.+.+.+.++++++++.+. ++
T Consensus 217 ~~~~~~~a~~~~~~l~~~~i~~iE-------qP~-~~~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~i 288 (388)
T 2nql_A 217 WNQTPERALELIAEMQPFDPWFAE-------APV-WTEDIAGLEKVSKNTDVPIAVGEEWRTHWDMRARIERCRIAIVQP 288 (388)
T ss_dssp SCSCHHHHHHHHHHHGGGCCSCEE-------CCS-CTTCHHHHHHHHTSCCSCEEECTTCCSHHHHHHHHTTSCCSEECC
T ss_pred CCCCHHHHHHHHHHHhhcCCCEEE-------CCC-ChhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEe
Confidence 889999999999999999999873 222 346899999999999999999999999999999997532 22
Q ss_pred ccccCCCCCchHHHHHHHHHhcCCC
Q psy4398 254 LRNHYPVEKLPKTILYAHCKYKRFE 278 (306)
Q Consensus 254 Grall~~p~~~~~~l~~~~~~~g~~ 278 (306)
-... +-...-+.+.++.+++|++
T Consensus 289 k~~~--GGit~~~~i~~~A~~~g~~ 311 (388)
T 2nql_A 289 EMGH--KGITNFIRIGALAAEHGID 311 (388)
T ss_dssp CHHH--HCHHHHHHHHHHHHHHTCE
T ss_pred cCCC--CCHHHHHHHHHHHHHcCCe
Confidence 1111 1112223666778888887
No 85
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=98.89 E-value=5.9e-09 Score=91.18 Aligned_cols=115 Identities=14% Similarity=0.101 Sum_probs=84.8
Q ss_pred HhcCCCEEEEccCCCccccccCCccccccCCh--HHHHHHHHHHHhcc-cccEEEEeccCCChHHHHHHHHHHHHcCCcE
Q psy4398 123 VEHDVAAIDINMGCPKQFSLTGGMGAALLSTP--DIACNILTTLISNL-SIPVSCKIRVFHNEADTIALCKRLEACGIIA 199 (306)
Q Consensus 123 ~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~--~~~~eiv~~v~~~~-~~pv~vKir~g~~~~~~~~~a~~l~~~G~d~ 199 (306)
++.|+|.|.++...- .++ ..+.++++.+++.. +.++.+.++ + .+.++.+.++|+|+
T Consensus 98 ~~~Gad~V~l~~~~~--------------~~~~~~~~~~~i~~i~~~~~~~~v~~~~~---t----~~ea~~a~~~Gad~ 156 (234)
T 1yxy_A 98 AALNIAVIAMDCTKR--------------DRHDGLDIASFIRQVKEKYPNQLLMADIS---T----FDEGLVAHQAGIDF 156 (234)
T ss_dssp HTTTCSEEEEECCSS--------------CCTTCCCHHHHHHHHHHHCTTCEEEEECS---S----HHHHHHHHHTTCSE
T ss_pred HHcCCCEEEEccccc--------------CCCCCccHHHHHHHHHHhCCCCeEEEeCC---C----HHHHHHHHHcCCCE
Confidence 345999999986531 111 23467888888766 667777665 2 23377888999999
Q ss_pred E--EEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhh---hhhccccCC
Q psy4398 200 I--GVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLN---CAFLRNHYP 259 (306)
Q Consensus 200 i--~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~---v~vGrall~ 259 (306)
| ++++.+.......+.+++.++++++. ++||++.|||+|.+++.++++.| +++||+++.
T Consensus 157 i~~~v~g~~~~~~~~~~~~~~~i~~~~~~-~ipvia~GGI~s~~~~~~~~~~Gad~v~vGsal~~ 220 (234)
T 1yxy_A 157 VGTTLSGYTPYSRQEAGPDVALIEALCKA-GIAVIAEGKIHSPEEAKKINDLGVAGIVVGGAITR 220 (234)
T ss_dssp EECTTTTSSTTSCCSSSCCHHHHHHHHHT-TCCEEEESCCCSHHHHHHHHTTCCSEEEECHHHHC
T ss_pred EeeeccccCCCCcCCCCCCHHHHHHHHhC-CCCEEEECCCCCHHHHHHHHHCCCCEEEEchHHhC
Confidence 9 67765432211124588999999998 99999999999999999999875 499999986
No 86
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=98.88 E-value=2.9e-08 Score=94.06 Aligned_cols=166 Identities=14% Similarity=0.159 Sum_probs=123.6
Q ss_pred CCceEEE-ec-C-C-------CHHHHHHHHHHHh-cCCCEEEEcc------CC----CccccccCCcccccc-CChHHHH
Q psy4398 101 KNKIILQ-IG-T-A-------DPERALEAAKKVE-HDVAAIDINM------GC----PKQFSLTGGMGAALL-STPDIAC 158 (306)
Q Consensus 101 ~~p~ivq-l~-g-~-------~~~~~~~aa~~~~-~g~d~veln~------gc----P~~~~~~~~~G~~l~-~~~~~~~ 158 (306)
..|+..+ +. | . ++++|.+.|+++. +||+.|.|+. |+ |..| +.||+... ++++...
T Consensus 129 ~vp~y~~~i~~g~~~~~~~~~~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~~~~~~---~~~GG~~~~~~~~~~~ 205 (410)
T 2gl5_A 129 KLRTYASQLQFGWGDKNHILVTPEEYAEAARAALDDGYDAIKVDPLEIDRNGDDCVFQNRN---RNYSGLLLADQLKMGE 205 (410)
T ss_dssp SEEEEEECGGGCCTTCCSCCCSHHHHHHHHHHHHHTTCSEEEECSSSBCTTSCBTTTSSCC---GGGGSCCCHHHHHHHH
T ss_pred ceeEeEecccCCccccccccCCHHHHHHHHHHHHHcCCCEEEEeccccCCccccccccccc---ccccCccchhHHHHHH
Confidence 3566665 65 4 4 8999999888775 5999999996 54 3322 35787765 5778889
Q ss_pred HHHHHHHhcc--cccEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecC
Q psy4398 159 NILTTLISNL--SIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGG 236 (306)
Q Consensus 159 eiv~~v~~~~--~~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GG 236 (306)
++++++|+++ ++++.+....+|+.+++.++++.+++.|++.|- ++. .+.+++..+++++.+++||++.+.
T Consensus 206 e~v~avR~a~G~d~~l~vDan~~~~~~~ai~~~~~l~~~~i~~iE-------~P~-~~~~~~~~~~l~~~~~iPIa~dE~ 277 (410)
T 2gl5_A 206 ARIAAMREAMGDDADIIVEIHSLLGTNSAIQFAKAIEKYRIFLYE-------EPI-HPLNSDNMQKVSRSTTIPIATGER 277 (410)
T ss_dssp HHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHGGGCEEEEE-------CSS-CSSCHHHHHHHHHHCSSCEEECTT
T ss_pred HHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCeEE-------CCC-ChhhHHHHHHHHhhCCCCEEecCC
Confidence 9999999988 578888888889999999999999999998774 122 346899999999999999999999
Q ss_pred CCCHHHHHHHHHhhhhhccccCCCC-Cc----hHHHHHHHHHhcCCCC
Q psy4398 237 SKEIVDYGGVFSLNCAFLRNHYPVE-KL----PKTILYAHCKYKRFEV 279 (306)
Q Consensus 237 I~s~~~~~~~l~~~v~vGrall~~p-~~----~~~~l~~~~~~~g~~~ 279 (306)
+.+.++++++++.+. ...+.-++ .+ .-+.+.+..+++|++.
T Consensus 278 ~~~~~~~~~~i~~~~--~d~v~ik~~~~GGit~~~~ia~~A~~~gi~~ 323 (410)
T 2gl5_A 278 SYTRWGYRELLEKQS--IAVAQPDLCLCGGITEGKKICDYANIYDTTV 323 (410)
T ss_dssp CCTTHHHHHHHHTTC--CSEECCCTTTTTHHHHHHHHHHHHHTTTCEE
T ss_pred cCCHHHHHHHHHcCC--CCEEecCccccCCHHHHHHHHHHHHHcCCeE
Confidence 999999999987532 01111122 11 1126667777788773
No 87
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=98.87 E-value=2.8e-08 Score=90.48 Aligned_cols=64 Identities=19% Similarity=0.271 Sum_probs=48.5
Q ss_pred CCcHHHHHHHHhhCCCcEE--EecCCCCHHHHHHHHHhh---hhhccccCCCCC---chHH---HHHHHHHhcCC
Q psy4398 214 RNRIEMIRTLTQHLKIPVI--ANGGSKEIVDYGGVFSLN---CAFLRNHYPVEK---LPKT---ILYAHCKYKRF 277 (306)
Q Consensus 214 p~~~~~v~~i~~~~~ipvi--a~GGI~s~~~~~~~l~~~---v~vGrall~~p~---~~~~---~l~~~~~~~g~ 277 (306)
+..+++++++++.+++||+ ++|||.|.+++.++++.| +++||+++..+. ..+. .+.+|++.+++
T Consensus 193 ~~~~~~i~~i~~~~~iPvi~~a~GGI~~~~d~~~~~~~GadgV~vGsai~~~~~p~~~~~~l~~~~~~~~~~~~~ 267 (305)
T 2nv1_A 193 GAPYELLLQIKKDGKLPVVNFAAGGVATPADAALMMQLGADGVFVGSGIFKSDNPAKFAKAIVEATTHFTDYKLI 267 (305)
T ss_dssp TCCHHHHHHHHHHTSCSSCEEBCSCCCSHHHHHHHHHTTCSCEEECGGGGGSSCHHHHHHHHHHHHHTTTCHHHH
T ss_pred cccHHHHHHHHHhcCCCEEEEeccCCCCHHHHHHHHHcCCCEEEEcHHHHcCCCHHHHHHHHHHHHHHhcChhhH
Confidence 3578899999998899999 999999999999999864 599999996432 2221 45555555543
No 88
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=98.86 E-value=2.5e-08 Score=110.03 Aligned_cols=215 Identities=11% Similarity=0.066 Sum_probs=137.9
Q ss_pred ccccccccccCCceEEccCC-CCCCHHHHHHHHHcCC-CEE-EecceechhhhhhhhhhhcccccccccCCCCCceeeec
Q psy4398 20 ANANQANINYSNKIILAPMV-RMNTLPFRLLALDYGA-DLV-YSEELVDHKLVKTERKVNDLLNTIDFVDPLDGSVVFRT 96 (306)
Q Consensus 20 ~~~~~~~l~l~n~i~lAPm~-~~t~~~~r~~~~~~G~-g~~-~te~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 96 (306)
+.+++..+.-+.||+.|||. ++++..+...+.++|. |.+ -..+.+++.+....+.... .
T Consensus 572 l~t~~t~~lg~~PIi~a~M~~~vs~~~LaaAva~aGglG~i~g~g~~~~e~l~~~i~~vk~------------------~ 633 (2060)
T 2uva_G 572 VDTKMSRLLGVPPVMVAGMTPTTVPWDFVAATMNAGYHIELAGGGYYNAQKMSDAISKIEK------------------A 633 (2060)
T ss_dssp EECHHHHHHTSCSEEECCCTTTTCSHHHHHHHHHTTCEECEEGGGCCSHHHHHHHHHHHGG------------------G
T ss_pred cchhhhhccccceEEecCCCCccccHHHHHHHHHCCCEEEECcCCCCCHHHHHHHHHHHHh------------------h
Confidence 44555555448999999999 6888888887667664 444 2233333322221111100 0
Q ss_pred CCCCCCceEEEecCCCHHH---HHHHHHHHh-cCCCE--EEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccc
Q psy4398 97 CPREKNKIILQIGTADPER---ALEAAKKVE-HDVAA--IDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSI 170 (306)
Q Consensus 97 ~~~~~~p~ivql~g~~~~~---~~~aa~~~~-~g~d~--veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~ 170 (306)
. ..+.|+++++...+++. +.+..+.+. .|++. |.+..|.|. . .++++.+++. ++
T Consensus 634 ~-~~~~p~gvN~~~~~p~~~~~~~~~~~~~~~~gv~i~gv~~~~G~p~---------------~---e~~~~~l~~~-gi 693 (2060)
T 2uva_G 634 I-PPGRGITVNLIYVNPRAMGWQIPLLGRLRADGVPIEGLTIGAGVPS---------------I---EVANEYIQTL-GI 693 (2060)
T ss_dssp S-CTTCCEEEEEETTCTTHHHHHHHHHHHHHTTTCCEEEEEEESSCCC---------------H---HHHHHHHHHS-CC
T ss_pred c-ccCCCeEecccccCcccchhHHHHHHHHHHcCCCcceEeecCCCCC---------------H---HHHHHHHHHc-CC
Confidence 1 12568999988766542 344555454 58888 888777664 1 2334444443 77
Q ss_pred cEEEEeccCCChHHHHHHHHHHHHcCCcEEE---EcccCCCCCCCC----CCcHHHHHHHHhhCCCcEEEecCCCCHHHH
Q psy4398 171 PVSCKIRVFHNEADTIALCKRLEACGIIAIG---VHGRTKAERPRH----RNRIEMIRTLTQHLKIPVIANGGSKEIVDY 243 (306)
Q Consensus 171 pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~---v~~~~~~~~~~~----p~~~~~v~~i~~~~~ipvia~GGI~s~~~~ 243 (306)
++...+. +..+..+.+..+.++|+|.|+ +.|....+.... ...+.++.+|++.+++|||+.|||.|.+++
T Consensus 694 ~~i~~v~---~~~~a~~~v~~l~~aG~D~iV~~q~~G~eaGGH~g~~d~~~~~l~lv~~i~~~~~ipviaaGGI~~g~~i 770 (2060)
T 2uva_G 694 RHISFKP---GSVDAIQQVINIAKANPTFPIILQWTGGRGGGHHSFEDFHQPILLMYSRIRKCSNIVLVAGSGFGGSEDT 770 (2060)
T ss_dssp SEEEECC---CSHHHHHHHHHHHHHCTTSCEEEEECCTTSSSSCCSCCSHHHHHHHHHHHHTSTTEEEEEESSCCSHHHH
T ss_pred eEEEecC---CHHHHHHHHHHHHHcCCCEEEEeeeEcccCCCCCCcccccchHHHHHHHHHHHcCCCEEEeCCCCCHHHH
Confidence 7774444 446778887888999999999 776544332221 224678899999999999999999999999
Q ss_pred HHHH-----------Hh---hhhhccccCCCCCc-hHHHHHHHHHhc
Q psy4398 244 GGVF-----------SL---NCAFLRNHYPVEKL-PKTILYAHCKYK 275 (306)
Q Consensus 244 ~~~l-----------~~---~v~vGrall~~p~~-~~~~l~~~~~~~ 275 (306)
.+++ .+ +|++|+.++.-.+. .....++.+.+.
T Consensus 771 ~aaltg~ws~~~g~palGAdgV~~GT~f~~t~Ea~~s~~~K~~lv~a 817 (2060)
T 2uva_G 771 YPYLTGSWSTKFGYPPMPFDGCMFGSRMMTAKEAHTSKQAKQAIVDA 817 (2060)
T ss_dssp HHHHHTCGGGTTTSCCCCCSCEEESGGGGGBTTSCCCHHHHHHHHTS
T ss_pred HHHhcCcchhhcCCCCCCCCEEEEchhhhcCcCCCCCHHHHHHHHhC
Confidence 9999 54 56999999864422 223445544443
No 89
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=98.85 E-value=1.1e-08 Score=87.48 Aligned_cols=137 Identities=14% Similarity=0.136 Sum_probs=93.4
Q ss_pred CceEEEecCCCHHHHHHHHHHHhc-CCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEeccCC
Q psy4398 102 NKIILQIGTADPERALEAAKKVEH-DVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFH 180 (306)
Q Consensus 102 ~p~ivql~g~~~~~~~~aa~~~~~-g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~ 180 (306)
.|+++.+.+.+++++.+.++.+.+ |++.|++++.+|.. .+.++.+|+.++..+.+....-.
T Consensus 10 ~~~i~~~~~~~~~~~~~~~~~~~~~G~~~iev~~~~~~~------------------~~~i~~ir~~~~~~~~ig~~~v~ 71 (205)
T 1wa3_A 10 HKIVAVLRANSVEEAKEKALAVFEGGVHLIEITFTVPDA------------------DTVIKELSFLKEKGAIIGAGTVT 71 (205)
T ss_dssp HCEEEEECCSSHHHHHHHHHHHHHTTCCEEEEETTSTTH------------------HHHHHHTHHHHHTTCEEEEESCC
T ss_pred CCEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCCChhH------------------HHHHHHHHHHCCCCcEEEecccC
Confidence 589999999999999999998875 89999999887641 23455666554322334432112
Q ss_pred ChHHHHHHHHHHHHcCCcEEEEcccCC-------------------CCC---------------C-CCCCcHHHHHHHHh
Q psy4398 181 NEADTIALCKRLEACGIIAIGVHGRTK-------------------AER---------------P-RHRNRIEMIRTLTQ 225 (306)
Q Consensus 181 ~~~~~~~~a~~l~~~G~d~i~v~~~~~-------------------~~~---------------~-~~p~~~~~v~~i~~ 225 (306)
+.+ .++.+.++|+|+| ++.... ... . ..+..++.++++++
T Consensus 72 ~~~----~~~~a~~~Gad~i-v~~~~~~~~~~~~~~~g~~vi~g~~t~~e~~~a~~~Gad~vk~~~~~~~g~~~~~~l~~ 146 (205)
T 1wa3_A 72 SVE----QCRKAVESGAEFI-VSPHLDEEISQFCKEKGVFYMPGVMTPTELVKAMKLGHTILKLFPGEVVGPQFVKAMKG 146 (205)
T ss_dssp SHH----HHHHHHHHTCSEE-ECSSCCHHHHHHHHHHTCEEECEECSHHHHHHHHHTTCCEEEETTHHHHHHHHHHHHHT
T ss_pred CHH----HHHHHHHcCCCEE-EcCCCCHHHHHHHHHcCCcEECCcCCHHHHHHHHHcCCCEEEEcCccccCHHHHHHHHH
Confidence 322 2455566788888 554322 000 0 00124577888998
Q ss_pred hC-CCcEEEecCCCCHHHHHHHHHhh---hhhccccCCCCCc
Q psy4398 226 HL-KIPVIANGGSKEIVDYGGVFSLN---CAFLRNHYPVEKL 263 (306)
Q Consensus 226 ~~-~ipvia~GGI~s~~~~~~~l~~~---v~vGrall~~p~~ 263 (306)
.+ ++||++.|||+ .+++.++++.| +++|++++. +.|
T Consensus 147 ~~~~~pvia~GGI~-~~~~~~~~~~Ga~~v~vGs~i~~-~d~ 186 (205)
T 1wa3_A 147 PFPNVKFVPTGGVN-LDNVCEWFKAGVLAVGVGSALVK-GTP 186 (205)
T ss_dssp TCTTCEEEEBSSCC-TTTHHHHHHHTCSCEEECHHHHC-SCH
T ss_pred hCCCCcEEEcCCCC-HHHHHHHHHCCCCEEEECccccC-CCH
Confidence 88 89999999997 78999998875 499999987 543
No 90
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=98.85 E-value=8.1e-08 Score=90.08 Aligned_cols=149 Identities=15% Similarity=0.111 Sum_probs=115.8
Q ss_pred CCHHHHHHHHHHHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEeccCCChHHHHH
Q psy4398 111 ADPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIRVFHNEADTIA 187 (306)
Q Consensus 111 ~~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~ 187 (306)
.+++++.+.++++. +||+.|.|+++++. +| ...+++...++++++|+++ ++++.++...+|+.+++.+
T Consensus 148 ~~~e~~~~~a~~~~~~Gf~~iKik~g~~~-------~~--~~~~~~~~~e~v~avr~a~g~d~~l~vDan~~~~~~~a~~ 218 (382)
T 1rvk_A 148 ATPEDYGRFAETLVKRGYKGIKLHTWMPP-------VS--WAPDVKMDLKACAAVREAVGPDIRLMIDAFHWYSRTDALA 218 (382)
T ss_dssp SSHHHHHHHHHHHHHHTCSEEEEECCCTT-------ST--TCCCHHHHHHHHHHHHHHHCTTSEEEEECCTTCCHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEcCCcCc-------cc--cccchHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHH
Confidence 68999999888775 59999999999854 22 2358899999999999988 5788998888899999999
Q ss_pred HHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCC-HHHHHHHHHhhhhhccccCCCC-----
Q psy4398 188 LCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKE-IVDYGGVFSLNCAFLRNHYPVE----- 261 (306)
Q Consensus 188 ~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s-~~~~~~~l~~~v~vGrall~~p----- 261 (306)
+++.+++.|++.|- ++. .+.+++..+++++.+++||++.+.+.+ .++++++++.+. ...+.-++
T Consensus 219 ~~~~l~~~~i~~iE-------~P~-~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~i~~~~--~d~v~ik~~~~GG 288 (382)
T 1rvk_A 219 LGRGLEKLGFDWIE-------EPM-DEQSLSSYKWLSDNLDIPVVGPESAAGKHWHRAEWIKAGA--CDILRTGVNDVGG 288 (382)
T ss_dssp HHHHHHTTTCSEEE-------CCS-CTTCHHHHHHHHHHCSSCEEECSSCSSHHHHHHHHHHTTC--CSEEEECHHHHTS
T ss_pred HHHHHHhcCCCEEe-------CCC-ChhhHHHHHHHHhhCCCCEEEeCCccCcHHHHHHHHHcCC--CCEEeeCchhcCC
Confidence 99999999999874 222 246899999999999999999999999 999999988632 00000111
Q ss_pred CchHHHHHHHHHhcCCC
Q psy4398 262 KLPKTILYAHCKYKRFE 278 (306)
Q Consensus 262 ~~~~~~l~~~~~~~g~~ 278 (306)
...-+.+.++.+++|++
T Consensus 289 it~~~~i~~~A~~~g~~ 305 (382)
T 1rvk_A 289 ITPALKTMHLAEAFGME 305 (382)
T ss_dssp HHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHcCCe
Confidence 11123666777888887
No 91
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=98.82 E-value=4.3e-08 Score=86.34 Aligned_cols=150 Identities=14% Similarity=0.111 Sum_probs=108.0
Q ss_pred CceEEEecCCCH--HHHHHHHHHHhcCCCEEEEc--cCCCccccccCCccccc----------cCChHHHHHHHHHHHhc
Q psy4398 102 NKIILQIGTADP--ERALEAAKKVEHDVAAIDIN--MGCPKQFSLTGGMGAAL----------LSTPDIACNILTTLISN 167 (306)
Q Consensus 102 ~p~ivql~g~~~--~~~~~aa~~~~~g~d~veln--~gcP~~~~~~~~~G~~l----------~~~~~~~~eiv~~v~~~ 167 (306)
..++.+|...++ +.+.+.++.+++++|.||++ +++|.. | |... ..+.....++++++++.
T Consensus 5 ~~~~~~i~~~~~~~~~~~~~a~~~~~~ad~iel~~p~sdp~~----D--G~~~~~~~~~al~~g~~~~~~~~~i~~i~~~ 78 (248)
T 1geq_A 5 GSLIPYLTAGDPDKQSTLNFLLALDEYAGAIELGIPFSDPIA----D--GKTIQESHYRALKNGFKLREAFWIVKEFRRH 78 (248)
T ss_dssp TEEEEEEETTSSCHHHHHHHHHHHGGGBSCEEEECCCSCCTT----S--CHHHHHHHHHHHHTTCCHHHHHHHHHHHHTT
T ss_pred ccEEEEEeCCCCCHHHHHHHHHHHHHcCCEEEECCCCCCCCC----C--CHHHHHHHHHHHHCCCCHHHHHHHHHHHHhh
Confidence 358889988887 58999888776449999998 566652 1 1111 12567778999999998
Q ss_pred ccccEEEEeccCCCh---HHHHHHHHHHHHcCCcEEEEcccC-----------------------C--------------
Q psy4398 168 LSIPVSCKIRVFHNE---ADTIALCKRLEACGIIAIGVHGRT-----------------------K-------------- 207 (306)
Q Consensus 168 ~~~pv~vKir~g~~~---~~~~~~a~~l~~~G~d~i~v~~~~-----------------------~-------------- 207 (306)
+++|+.+... .+. ....+.++.+.++|+|+++++... .
T Consensus 79 ~~~pv~~~~~--~~~~~~~~~~~~~~~~~~~Gad~v~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~t~~e~~~~~~~~~ 156 (248)
T 1geq_A 79 SSTPIVLMTY--YNPIYRAGVRNFLAEAKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPNTPDERLKVIDDMT 156 (248)
T ss_dssp CCCCEEEEEC--HHHHHHHCHHHHHHHHHHHTCCEEEETTCCGGGHHHHHHHHHHHTCEEEEEECTTCCHHHHHHHHHHC
T ss_pred CCCCEEEEec--cchhhhcCHHHHHHHHHHCCCCEEEECCCChhhHHHHHHHHHHhCCCeEEEECCCCHHHHHHHHHhcC
Confidence 8889887664 121 113578888888999999986411 0
Q ss_pred C--------CCCCC------CCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhh---hhhccccCC
Q psy4398 208 A--------ERPRH------RNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLN---CAFLRNHYP 259 (306)
Q Consensus 208 ~--------~~~~~------p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~---v~vGrall~ 259 (306)
+ ....+ +..++.++++++.+++||++.|||++.+++.++++.| +.+|++++.
T Consensus 157 d~~i~~~~~~G~~g~~~~~~~~~~~~i~~l~~~~~~pi~~~GGI~~~e~i~~~~~~Gad~vivGsai~~ 225 (248)
T 1geq_A 157 TGFVYLVSLYGTTGAREEIPKTAYDLLRRAKRICRNKVAVGFGVSKREHVVSLLKEGANGVVVGSALVK 225 (248)
T ss_dssp SSEEEEECCC-------CCCHHHHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCSEEEECHHHHH
T ss_pred CCeEEEEECCccCCCCCCCChhHHHHHHHHHhhcCCCEEEEeecCCHHHHHHHHHcCCCEEEEcHHHHh
Confidence 0 00011 2246788999999999999999999999999998875 499999885
No 92
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=98.82 E-value=4.2e-08 Score=92.36 Aligned_cols=159 Identities=9% Similarity=0.113 Sum_probs=119.3
Q ss_pred CCCHHHHHHHHHHHh-cCCCEEEEccCCCcc--ccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEeccCCChHH
Q psy4398 110 TADPERALEAAKKVE-HDVAAIDINMGCPKQ--FSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIRVFHNEAD 184 (306)
Q Consensus 110 g~~~~~~~~aa~~~~-~g~d~veln~gcP~~--~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~ 184 (306)
..+++++.+.|+++. +||+.|.|+.+|+.. ......||++..++++...++++++|+++ ++++.+....+|+.++
T Consensus 135 ~~~~~~~~~~a~~~~~~Gf~~vKik~g~~~~g~~~~~~~~gg~~~~~~~~~~e~v~avr~a~G~d~~l~vD~n~~~~~~~ 214 (392)
T 2poz_A 135 ADTPDEFARAVERPLKEGYGALKFYPLAQRVGSALQHVTRRSMSAEAIELAYRRVKAVRDAAGPEIELMVDLSGGLTTDE 214 (392)
T ss_dssp CCSHHHHHHHTHHHHHTTCSEEEECCCCEEETTEEECCBTTBCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTTCSCHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecccccccccccccccCCcchhhHHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHH
Confidence 357899988888775 599999999986321 00123567776778899999999999988 5788888888899999
Q ss_pred HHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhhhhccccCCCC-C-
Q psy4398 185 TIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNCAFLRNHYPVE-K- 262 (306)
Q Consensus 185 ~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v~vGrall~~p-~- 262 (306)
+.++++.+++.|+++|- ++. .+.+++..+++++.+++||++.+.+.+.++++++++.+. ...+.-++ .
T Consensus 215 a~~~~~~l~~~~i~~iE-------~P~-~~~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~--~d~v~ik~~~~ 284 (392)
T 2poz_A 215 TIRFCRKIGELDICFVE-------EPC-DPFDNGALKVISEQIPLPIAVGERVYTRFGFRKIFELQA--CGIIQPDIGTA 284 (392)
T ss_dssp HHHHHHHHGGGCEEEEE-------CCS-CTTCHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHTTTC--CSEECCCTTTS
T ss_pred HHHHHHHHHhcCCCEEE-------CCC-CcccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCC--CCEEecCcccc
Confidence 99999999999988774 222 345899999999999999999999999999999987532 00111122 1
Q ss_pred ---chHHHHHHHHHhcCCC
Q psy4398 263 ---LPKTILYAHCKYKRFE 278 (306)
Q Consensus 263 ---~~~~~l~~~~~~~g~~ 278 (306)
..-+.+.+..+++|++
T Consensus 285 GGit~~~~i~~~A~~~g~~ 303 (392)
T 2poz_A 285 GGLMETKKICAMAEAYNMR 303 (392)
T ss_dssp SCHHHHHHHHHHHHTTTCE
T ss_pred CCHHHHHHHHHHHHHcCCe
Confidence 1123666777778877
No 93
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=98.80 E-value=1.7e-07 Score=88.21 Aligned_cols=153 Identities=11% Similarity=0.075 Sum_probs=119.2
Q ss_pred CceEEEe-c-CCCHHHHHHHHHHHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEe
Q psy4398 102 NKIILQI-G-TADPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKI 176 (306)
Q Consensus 102 ~p~ivql-~-g~~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKi 176 (306)
.|+..++ . ..+++++++.++.+. +||+.+.+++|| +++.-.++++++|+++ +.++.++.
T Consensus 139 v~~y~~~~~~~~~~e~~~~~a~~~~~~G~~~iKiKvG~----------------~~~~d~~~v~avR~a~g~d~~l~vDa 202 (389)
T 3ozy_A 139 VRAYASSIYWDLTPDQAADELAGWVEQGFTAAKLKVGR----------------APRKDAANLRAMRQRVGADVEILVDA 202 (389)
T ss_dssp EEEEEEEECSSCCHHHHHHHHHHHHHTTCSEEEEECCS----------------CHHHHHHHHHHHHHHHCTTSEEEEEC
T ss_pred eeeEEecCCCCCCHHHHHHHHHHHHHCCCCEEeeccCC----------------CHHHHHHHHHHHHHHcCCCceEEEEC
Confidence 6777777 5 688999998888765 599999999876 3666788899999987 57899998
Q ss_pred ccCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHH-hhCCCcEEEecCCCCHHHHHHHHHhhh----
Q psy4398 177 RVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLT-QHLKIPVIANGGSKEIVDYGGVFSLNC---- 251 (306)
Q Consensus 177 r~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~-~~~~ipvia~GGI~s~~~~~~~l~~~v---- 251 (306)
..+|+.+++.++++.+++.|+++|. ++. .+.+++..++++ +.+++||++.+.+.+.++++++++.+.
T Consensus 203 n~~~~~~~A~~~~~~l~~~~i~~iE-------qP~-~~~d~~~~~~l~~~~~~iPIa~dE~i~~~~~~~~~i~~~~~d~v 274 (389)
T 3ozy_A 203 NQSLGRHDALAMLRILDEAGCYWFE-------EPL-SIDDIEGHRILRAQGTPVRIATGENLYTRNAFNDYIRNDAIDVL 274 (389)
T ss_dssp TTCCCHHHHHHHHHHHHHTTCSEEE-------SCS-CTTCHHHHHHHHTTCCSSEEEECTTCCHHHHHHHHHHTTCCSEE
T ss_pred CCCcCHHHHHHHHHHHHhcCCCEEE-------CCC-CcccHHHHHHHHhcCCCCCEEeCCCCCCHHHHHHHHHcCCCCEE
Confidence 8899999999999999999999984 222 345889999999 999999999999999999999987532
Q ss_pred hhccccCCCCCchHHHHHHHHHhcCCCC
Q psy4398 252 AFLRNHYPVEKLPKTILYAHCKYKRFEV 279 (306)
Q Consensus 252 ~vGrall~~p~~~~~~l~~~~~~~g~~~ 279 (306)
++--...-+ ...-+.+.++.+++|++.
T Consensus 275 ~ik~~~~GG-it~~~~ia~~A~~~gi~~ 301 (389)
T 3ozy_A 275 QADASRAGG-ITEALAISASAASAHLAW 301 (389)
T ss_dssp CCCTTTSSC-HHHHHHHHHHHHHTTCEE
T ss_pred EeCccccCC-HHHHHHHHHHHHHcCCEE
Confidence 221111111 112236778888888883
No 94
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=98.79 E-value=1.6e-07 Score=88.47 Aligned_cols=145 Identities=12% Similarity=0.111 Sum_probs=112.2
Q ss_pred CCCHHHHHHHHHHHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEeccCCChHHHH
Q psy4398 110 TADPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIRVFHNEADTI 186 (306)
Q Consensus 110 g~~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~ 186 (306)
+.+++++.+.|+++. +||+.|+|+.++. .++...++++++|+++ ++++.++...+|+.+++.
T Consensus 147 ~~~~~~~~~~a~~~~~~Gf~~vKik~g~~---------------~~~~~~e~v~avR~a~G~d~~l~vDan~~~~~~~a~ 211 (391)
T 2qgy_A 147 KKDTNDYLRQIEKFYGKKYGGIKIYPMLD---------------SLSISIQFVEKVREIVGDELPLMLDLAVPEDLDQTK 211 (391)
T ss_dssp CCCHHHHHHHHHHHHHTTCSCEEECCCCS---------------SHHHHHHHHHHHHHHHCSSSCEEEECCCCSCHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEccCCC---------------hHHHHHHHHHHHHHHhCCCCEEEEEcCCCCCHHHHH
Confidence 468999999888775 5999999986631 1578889999999987 588999998899999999
Q ss_pred HHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhh----hhccccCCCCC
Q psy4398 187 ALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNC----AFLRNHYPVEK 262 (306)
Q Consensus 187 ~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v----~vGrall~~p~ 262 (306)
++++.+++.|+++|- ++. .+.+++..+++++.+++||++.+.+.++++++++++.+. ++-....-+ .
T Consensus 212 ~~~~~l~~~~i~~iE-------qP~-~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GG-i 282 (391)
T 2qgy_A 212 SFLKEVSSFNPYWIE-------EPV-DGENISLLTEIKNTFNMKVVTGEKQSGLVHFRELISRNAADIFNPDISGMGG-L 282 (391)
T ss_dssp HHHHHHGGGCCSEEE-------CSS-CTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCBTTTSSC-H
T ss_pred HHHHHHHhcCCCeEe-------CCC-ChhhHHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHcCCCCEEEECcchhCC-H
Confidence 999999999999874 222 246899999999999999999999999999999997632 221111111 1
Q ss_pred chHHHHHHHHHhcCCC
Q psy4398 263 LPKTILYAHCKYKRFE 278 (306)
Q Consensus 263 ~~~~~l~~~~~~~g~~ 278 (306)
..-+.+.++.+++|++
T Consensus 283 t~~~~i~~~A~~~gi~ 298 (391)
T 2qgy_A 283 IDIIEISNEASNNGIF 298 (391)
T ss_dssp HHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHHHCCCE
Confidence 1223666777788877
No 95
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=98.77 E-value=9e-08 Score=89.67 Aligned_cols=122 Identities=12% Similarity=0.154 Sum_probs=102.6
Q ss_pred CCceEEEecCCCHHHHHHHHHHHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEec
Q psy4398 101 KNKIILQIGTADPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIR 177 (306)
Q Consensus 101 ~~p~ivql~g~~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir 177 (306)
..|+...+...+++++.+.++++. +||+.|++++||| +++...++++++|+++ ++++.++..
T Consensus 134 ~v~~~~~~~~~~~e~~~~~a~~~~~~Gf~~iKik~g~~---------------~~~~~~e~v~avr~a~g~~~~l~vDan 198 (378)
T 2qdd_A 134 PVPINSSISTGTPDQMLGLIAEAAAQGYRTHSAKIGGS---------------DPAQDIARIEAISAGLPDGHRVTFDVN 198 (378)
T ss_dssp CEEBEEEECSCCHHHHHHHHHHHHHHTCCEEEEECCSS---------------CHHHHHHHHHHHHHSCCTTCEEEEECT
T ss_pred CCceEEEecCCCHHHHHHHHHHHHHHhhhheeecCCCC---------------ChHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence 356666666678999998888775 5999999998875 4677889999999988 578888888
Q ss_pred cCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHh
Q psy4398 178 VFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSL 249 (306)
Q Consensus 178 ~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~ 249 (306)
.+|+.+++.++++.++ .|+ .| +++. + +++..+++++.+++||++.+.+.+.++++++++.
T Consensus 199 ~~~~~~~a~~~~~~l~-~~i-~i-------EqP~--~-d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~ 258 (378)
T 2qdd_A 199 RAWTPAIAVEVLNSVR-ARD-WI-------EQPC--Q-TLDQCAHVARRVANPIMLDECLHEFSDHLAAWSR 258 (378)
T ss_dssp TCCCHHHHHHHHTSCC-CCC-EE-------ECCS--S-SHHHHHHHHTTCCSCEEECTTCCSHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhC-CCc-EE-------EcCC--C-CHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHh
Confidence 8899999999999998 888 65 2233 2 8999999999999999999999999999999875
No 96
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=98.77 E-value=7.4e-08 Score=89.90 Aligned_cols=152 Identities=13% Similarity=0.171 Sum_probs=116.7
Q ss_pred CceEEEecCCCHHHHHHHHHHHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEecc
Q psy4398 102 NKIILQIGTADPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIRV 178 (306)
Q Consensus 102 ~p~ivql~g~~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~ 178 (306)
.|+-.++++.+++++.+.++++. +||+.|.||+|+ +++...++++++|+++ ++++.++...
T Consensus 131 v~~~~~i~~~~~~~~~~~a~~~~~~Gf~~iKik~g~----------------~~~~~~e~v~avr~a~g~~~~l~vDan~ 194 (369)
T 2p8b_A 131 FPVTHVLSIADPENMAEEAASMIQKGYQSFKMKVGT----------------NVKEDVKRIEAVRERVGNDIAIRVDVNQ 194 (369)
T ss_dssp EECCEEECSCCHHHHHHHHHHHHHTTCCEEEEECCS----------------CHHHHHHHHHHHHHHHCTTSEEEEECTT
T ss_pred eeeeEEecCCChHHHHHHHHHHHHcCcCEEEEEeCC----------------CHHHHHHHHHHHHHHhCCCCeEEEECCC
Confidence 45556777889999998888775 599999998763 4677889999999988 5788888887
Q ss_pred CCChHHHH-HHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhh----hh
Q psy4398 179 FHNEADTI-ALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNC----AF 253 (306)
Q Consensus 179 g~~~~~~~-~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v----~v 253 (306)
+|+.+++. ++++.+++.|+++|. ++. .+.+++..+++++.+++||++.+.+.+.++++++++.+. ++
T Consensus 195 ~~~~~~a~~~~~~~l~~~~i~~iE-------qP~-~~~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~i 266 (369)
T 2p8b_A 195 GWKNSANTLTALRSLGHLNIDWIE-------QPV-IADDIDAMAHIRSKTDLPLMIDEGLKSSREMRQIIKLEAADKVNI 266 (369)
T ss_dssp TTBSHHHHHHHHHTSTTSCCSCEE-------CCB-CTTCHHHHHHHHHTCCSCEEESTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred CCCHHHHHHHHHHHHHhCCCcEEE-------CCC-CcccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCCCCEEEe
Confidence 89999999 999999999999874 233 356899999999999999999999999999999988532 21
Q ss_pred ccccCCCCCchHHHHHHHHHhcCCC
Q psy4398 254 LRNHYPVEKLPKTILYAHCKYKRFE 278 (306)
Q Consensus 254 Grall~~p~~~~~~l~~~~~~~g~~ 278 (306)
-....-+ ...-+.+.+..+++|++
T Consensus 267 k~~~~GG-it~~~~i~~~A~~~g~~ 290 (369)
T 2p8b_A 267 KLMKCGG-IYPAVKLAHQAEMAGIE 290 (369)
T ss_dssp CHHHHTS-HHHHHHHHHHHHHTTCE
T ss_pred ecchhCC-HHHHHHHHHHHHHcCCc
Confidence 1111101 11223566777788877
No 97
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=98.77 E-value=1.3e-07 Score=89.37 Aligned_cols=156 Identities=10% Similarity=0.103 Sum_probs=117.0
Q ss_pred CCceEEEec-CCCHHHHHHHHHHHh-cCCCEEEEccCCCccccccCCccccccCCh-HHHHHHHHHHHhcc--cccEEEE
Q psy4398 101 KNKIILQIG-TADPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTP-DIACNILTTLISNL--SIPVSCK 175 (306)
Q Consensus 101 ~~p~ivql~-g~~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~-~~~~eiv~~v~~~~--~~pv~vK 175 (306)
..|+..++. +.+++++.+.++++. +||+.|.++. ||. |+ ++ +...++++++|+++ ++++.++
T Consensus 133 ~vp~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~-spv--------G~----~~~~~~~e~v~avr~a~G~d~~l~vD 199 (401)
T 2hzg_A 133 GKRPYASLLFGDTPQETLERARAARRDGFAAVKFGW-GPI--------GR----GTVAADADQIMAAREGLGPDGDLMVD 199 (401)
T ss_dssp CBEEEEEEECCSSHHHHHHHHHHHHHTTCSEEEEES-TTT--------TS----SCHHHHHHHHHHHHHHHCSSSEEEEE
T ss_pred ceEeeEEcCCCCCHHHHHHHHHHHHHhCCCeEEEcC-CCC--------CC----CHHHHHHHHHHHHHHHhCCCCeEEEE
Confidence 356655554 568999999888775 5999999996 553 32 44 77789999999988 5789999
Q ss_pred eccCC--ChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHh-hCCCcEEEecCCCCHHHHHHHHHhhh-
Q psy4398 176 IRVFH--NEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQ-HLKIPVIANGGSKEIVDYGGVFSLNC- 251 (306)
Q Consensus 176 ir~g~--~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~-~~~ipvia~GGI~s~~~~~~~l~~~v- 251 (306)
...+| +.+++.++++.+++.|++.|- ++. .+.+++..+++++ .+++||++.+.+.+.++++++++.+.
T Consensus 200 an~~~~~~~~~a~~~~~~l~~~~i~~iE-------qP~-~~~d~~~~~~l~~~~~~iPI~~dE~~~~~~~~~~~i~~~~~ 271 (401)
T 2hzg_A 200 VGQIFGEDVEAAAARLPTLDAAGVLWLE-------EPF-DAGALAAHAALAGRGARVRIAGGEAAHNFHMAQHLMDYGRI 271 (401)
T ss_dssp CTTTTTTCHHHHHTTHHHHHHTTCSEEE-------CCS-CTTCHHHHHHHHTTCCSSEEEECTTCSSHHHHHHHHHHSCC
T ss_pred CCCCCCCCHHHHHHHHHHHHhcCCCEEE-------CCC-CccCHHHHHHHHhhCCCCCEEecCCcCCHHHHHHHHHCCCC
Confidence 88899 999999999999999999874 222 3468999999999 89999999999999999999997532
Q ss_pred ---hhccccCCCCCchHHHHHHHHHhcCCC
Q psy4398 252 ---AFLRNHYPVEKLPKTILYAHCKYKRFE 278 (306)
Q Consensus 252 ---~vGrall~~p~~~~~~l~~~~~~~g~~ 278 (306)
++-....-+ ...-+.+.++.+++|++
T Consensus 272 d~v~ik~~~~GG-it~~~~i~~~A~~~g~~ 300 (401)
T 2hzg_A 272 GFIQIDCGRIGG-LGPAKRVADAAQARGIT 300 (401)
T ss_dssp SEEEECHHHHTS-HHHHHHHHHHHHHHTCE
T ss_pred CEEEeCcchhCC-HHHHHHHHHHHHHcCCE
Confidence 111110100 11123566777788877
No 98
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=98.75 E-value=1.6e-07 Score=87.69 Aligned_cols=122 Identities=12% Similarity=0.105 Sum_probs=104.1
Q ss_pred CCceEEEecCCCHHHHHHHHHHHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEec
Q psy4398 101 KNKIILQIGTADPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIR 177 (306)
Q Consensus 101 ~~p~ivql~g~~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir 177 (306)
..|+...+.+.+++++.+.++++. +||+.|+||++. +++...++++++|+++ ++++.++..
T Consensus 135 ~vp~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g~----------------~~~~~~e~v~avr~a~g~~~~l~vDan 198 (371)
T 2ps2_A 135 RLPLISSIYVGEPEDMRARVAKYRAKGYKGQSVKISG----------------EPVTDAKRITAALANQQPDEFFIVDAN 198 (371)
T ss_dssp CEEBEEEECSCCHHHHHHHHHHHHTTTCCEEEEECCS----------------CHHHHHHHHHHHTTTCCTTCEEEEECT
T ss_pred ceEEEEEeCCCCHHHHHHHHHHHHHhChheEEeecCC----------------CHHHHHHHHHHHHHhcCCCCEEEEECC
Confidence 456777787789999999888776 599999998763 3677889999999988 578888888
Q ss_pred cCCChHHHHHHHHHH-HHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHh
Q psy4398 178 VFHNEADTIALCKRL-EACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSL 249 (306)
Q Consensus 178 ~g~~~~~~~~~a~~l-~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~ 249 (306)
.+|+.+++.++++.+ ++.|+ .|- ++. + +++..+++++.+++||++.+.+.+.++++++++.
T Consensus 199 ~~~~~~~a~~~~~~l~~~~~i-~iE-------~P~--~-~~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~ 260 (371)
T 2ps2_A 199 GKLSVETALRLLRLLPHGLDF-ALE-------APC--A-TWRECISLRRKTDIPIIYDELATNEMSIVKILAD 260 (371)
T ss_dssp TBCCHHHHHHHHHHSCTTCCC-EEE-------CCB--S-SHHHHHHHHTTCCSCEEESTTCCSHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHhhcCC-cCc-------CCc--C-CHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHh
Confidence 889999999999999 99998 663 222 2 8899999999999999999999999999999886
No 99
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=98.75 E-value=2.8e-07 Score=87.33 Aligned_cols=160 Identities=8% Similarity=-0.009 Sum_probs=121.5
Q ss_pred CCceEEEe-cCCCHHHHHHHHHHHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEe
Q psy4398 101 KNKIILQI-GTADPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKI 176 (306)
Q Consensus 101 ~~p~ivql-~g~~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKi 176 (306)
..|+..++ ...+++++++.++.+. +||+.|.|++++... + |+ ++++...+.++++|+++ ++++.+..
T Consensus 167 ~v~~y~s~~~~~~~e~~~~~a~~~~~~Gf~~iKik~g~gp~----d--g~---~~~~~die~v~avReavG~d~~L~vDa 237 (412)
T 3stp_A 167 RIPVYYSKLYAGSIEAMQKEAEEAMKGGYKAFKSRFGYGPK----D--GM---PGMRENLKRVEAVREVIGYDNDLMLEC 237 (412)
T ss_dssp SEEEEEECCCSCCHHHHHHHHHHHHTTTCSEEEEECCCCGG----G--HH---HHHHHHHHHHHHHHHHHCSSSEEEEEC
T ss_pred eEEEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEecccCcc----c--cc---chHHHHHHHHHHHHHHcCCCCeEEEEC
Confidence 45666663 4568999999988775 599999999987421 1 22 35677888999999988 57899998
Q ss_pred ccCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhhhhccc
Q psy4398 177 RVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNCAFLRN 256 (306)
Q Consensus 177 r~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v~vGra 256 (306)
..+|+.+++.++++.|++.|+++|- ++. .+.+++..+++++.+++||++.+.+.+.++++++++.+. .
T Consensus 238 N~~~~~~~Ai~~~~~Le~~~i~~iE-------eP~-~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~li~~~a----~ 305 (412)
T 3stp_A 238 YMGWNLDYAKRMLPKLAPYEPRWLE-------EPV-IADDVAGYAELNAMNIVPISGGEHEFSVIGCAELINRKA----V 305 (412)
T ss_dssp TTCSCHHHHHHHHHHHGGGCCSEEE-------CCS-CTTCHHHHHHHHHTCSSCEEECTTCCSHHHHHHHHHTTC----C
T ss_pred CCCCCHHHHHHHHHHHHhcCCCEEE-------CCC-CcccHHHHHHHHhCCCCCEEeCCCCCCHHHHHHHHHcCC----C
Confidence 8899999999999999999999984 222 345889999999999999999999999999999987531 1
Q ss_pred cCCCCCchH-------HHHHHHHHhcCCCCCc
Q psy4398 257 HYPVEKLPK-------TILYAHCKYKRFEVPK 281 (306)
Q Consensus 257 ll~~p~~~~-------~~l~~~~~~~g~~~~~ 281 (306)
-+-+|...+ +.+.+..+++|++...
T Consensus 306 D~v~ik~~~~GGit~a~kia~~A~a~gi~v~~ 337 (412)
T 3stp_A 306 SVLQYDTNRVGGITAAQKINAIAEAAQIPVIP 337 (412)
T ss_dssp SEECCCHHHHTHHHHHHHHHHHHHHHTCCBCC
T ss_pred CEEecChhhcCCHHHHHHHHHHHHHcCCEEEe
Confidence 112222222 2556667788887443
No 100
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=98.73 E-value=2.7e-07 Score=87.35 Aligned_cols=125 Identities=11% Similarity=0.238 Sum_probs=102.7
Q ss_pred CHHHHHHHHHHHh-cCCCEEEEcc----CCCccccccCCcccccc--CChHHHHHHHHHHHhcc--cccEEEEeccCCCh
Q psy4398 112 DPERALEAAKKVE-HDVAAIDINM----GCPKQFSLTGGMGAALL--STPDIACNILTTLISNL--SIPVSCKIRVFHNE 182 (306)
Q Consensus 112 ~~~~~~~aa~~~~-~g~d~veln~----gcP~~~~~~~~~G~~l~--~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~ 182 (306)
+++++.+.|+++. +||+.|.+++ |.... .||+.+. ++++...++++++|+++ ++++.+....+|+.
T Consensus 149 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~G~~~~-----~~~G~~~~~~~~~~~~e~v~avRea~G~d~~l~vDan~~~~~ 223 (410)
T 2qq6_A 149 SNEEYIAVAREAVERGFDAIKLDVDDITGPLHR-----DFWNGAISPREHEAMVARVAAVREAVGPEVEVAIDMHGRFDI 223 (410)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCCSSSTTCS-----CSSSCCCCHHHHHHHHHHHHHHHHHHCSSSEEEEECTTCCCH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeeccccCCcccC-----CcCccccchhhHHHHHHHHHHHHHhcCCCCEEEEECCCCCCH
Confidence 6888988888775 5999999998 54221 1566665 46788899999999987 47788887778999
Q ss_pred HHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHh
Q psy4398 183 ADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSL 249 (306)
Q Consensus 183 ~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~ 249 (306)
+++.++++.+++.|++.|- ++. .+.+++..+++++.+++||++.+.+.+.++++++++.
T Consensus 224 ~~a~~~~~~l~~~~i~~iE-------eP~-~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~ 282 (410)
T 2qq6_A 224 PSSIRFARAMEPFGLLWLE-------EPT-PPENLDALAEVRRSTSTPICAGENVYTRFDFRELFAK 282 (410)
T ss_dssp HHHHHHHHHHGGGCCSEEE-------CCS-CTTCHHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHT
T ss_pred HHHHHHHHHHhhcCCCeEE-------CCC-ChhhHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHc
Confidence 9999999999999999875 122 3458999999999999999999999999999999875
No 101
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=98.72 E-value=5.6e-08 Score=94.27 Aligned_cols=129 Identities=16% Similarity=0.167 Sum_probs=90.5
Q ss_pred HHHHHHHHH-hcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc-cccEEEEeccCCChHHHHHHHHHH
Q psy4398 115 RALEAAKKV-EHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL-SIPVSCKIRVFHNEADTIALCKRL 192 (306)
Q Consensus 115 ~~~~aa~~~-~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~g~~~~~~~~~a~~l 192 (306)
++.+.++.+ ++|+|.|++|+.. | .+....++++++++.+ ++||.++-- .+ .+.++.+
T Consensus 237 ~~~~~a~~l~~aGvd~v~i~~~~----------G-----~~~~~~e~i~~i~~~~p~~pvi~g~~--~t----~e~a~~l 295 (494)
T 1vrd_A 237 ETMERVEKLVKAGVDVIVIDTAH----------G-----HSRRVIETLEMIKADYPDLPVVAGNV--AT----PEGTEAL 295 (494)
T ss_dssp THHHHHHHHHHTTCSEEEECCSC----------C-----SSHHHHHHHHHHHHHCTTSCEEEEEE--CS----HHHHHHH
T ss_pred hHHHHHHHHHHhCCCEEEEEecC----------C-----chHHHHHHHHHHHHHCCCceEEeCCc--CC----HHHHHHH
Confidence 345555555 4699999998642 1 2456778899999988 789988643 33 3445788
Q ss_pred HHcCCcEEEEcccCCCC------CCCCCCcHHHHHHHHhh---CCCcEEEecCCCCHHHHHHHHHhhh---hhccccCCC
Q psy4398 193 EACGIIAIGVHGRTKAE------RPRHRNRIEMIRTLTQH---LKIPVIANGGSKEIVDYGGVFSLNC---AFLRNHYPV 260 (306)
Q Consensus 193 ~~~G~d~i~v~~~~~~~------~~~~p~~~~~v~~i~~~---~~ipvia~GGI~s~~~~~~~l~~~v---~vGrall~~ 260 (306)
.++|+|+|.+....... ...+.+.+..+..+++. +++|||+.|||.+..++.++++.|+ ++||+++.+
T Consensus 296 ~~~G~d~I~v~~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~~ipvia~GGI~~~~di~kala~GAd~V~iGr~~l~~ 375 (494)
T 1vrd_A 296 IKAGADAVKVGVGPGSICTTRVVAGVGVPQLTAVMECSEVARKYDVPIIADGGIRYSGDIVKALAAGAESVMVGSIFAGT 375 (494)
T ss_dssp HHTTCSEEEECSSCSTTCHHHHHHCCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTB
T ss_pred HHcCCCEEEEcCCCCccccccccCCCCccHHHHHHHHHHHHhhcCCCEEEECCcCCHHHHHHHHHcCCCEEEECHHHhcC
Confidence 89999999994321100 00122345555555544 6899999999999999999999864 999999887
Q ss_pred CCch
Q psy4398 261 EKLP 264 (306)
Q Consensus 261 p~~~ 264 (306)
|.++
T Consensus 376 ~e~~ 379 (494)
T 1vrd_A 376 EEAP 379 (494)
T ss_dssp TTSS
T ss_pred CcCC
Confidence 7553
No 102
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=98.71 E-value=3.6e-07 Score=85.23 Aligned_cols=124 Identities=15% Similarity=0.258 Sum_probs=101.9
Q ss_pred ceEEEecCCCHHHHHHHHHHH-h-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhccc--ccEEEEecc
Q psy4398 103 KIILQIGTADPERALEAAKKV-E-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLS--IPVSCKIRV 178 (306)
Q Consensus 103 p~ivql~g~~~~~~~~aa~~~-~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~--~pv~vKir~ 178 (306)
|+-..++..+++++.+.++++ + +||+.|.|+++++ +++...++++++|++++ +++.+....
T Consensus 133 ~~~~~~~~~~~e~~~~~a~~~~~~~Gf~~iKik~g~~---------------~~~~~~e~v~avr~a~g~~~~l~vDan~ 197 (370)
T 1nu5_A 133 PIAWTLASGDTARDIDSALEMIETRRHNRFKVKLGAR---------------TPAQDLEHIRSIVKAVGDRASVRVDVNQ 197 (370)
T ss_dssp EBCEEECSSCHHHHHHHHHHHHHTTSCSEEEEECSSS---------------CHHHHHHHHHHHHHHHGGGCEEEEECTT
T ss_pred EeeEEecCCCHHHHHHHHHHHHHhCCccEEEEecCCC---------------ChHHHHHHHHHHHHhcCCCCEEEEECCC
Confidence 333445556888998888765 5 6999999998874 34566788999998874 778888887
Q ss_pred CCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHh
Q psy4398 179 FHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSL 249 (306)
Q Consensus 179 g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~ 249 (306)
+|+.+++.++++.+++.|++.|. ++. .+.+++..+++++.+++||++.+.+.+.++++++++.
T Consensus 198 ~~~~~~a~~~~~~l~~~~i~~iE-------qP~-~~~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~ 260 (370)
T 1nu5_A 198 GWDEQTASIWIPRLEEAGVELVE-------QPV-PRANFGALRRLTEQNGVAILADESLSSLSSAFELARD 260 (370)
T ss_dssp CCCHHHHHHHHHHHHHHTCCEEE-------CCS-CTTCHHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHhcCcceEe-------CCC-CcccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHh
Confidence 89999999999999999999874 222 3468999999999999999999999999999999875
No 103
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=98.70 E-value=2.6e-07 Score=87.20 Aligned_cols=154 Identities=12% Similarity=0.086 Sum_probs=112.1
Q ss_pred CHHHHHHHHHHHh-cCCCEEEEcc------CCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEeccCCCh
Q psy4398 112 DPERALEAAKKVE-HDVAAIDINM------GCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIRVFHNE 182 (306)
Q Consensus 112 ~~~~~~~aa~~~~-~g~d~veln~------gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~ 182 (306)
+++++.+.|+++. +||+.|.|+. |++... ...|....++++...++++++|+++ ++++.+....+|+.
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s---~~~g~~~~~~~~~~~e~v~avr~avG~d~~l~vDan~~~~~ 222 (403)
T 2ox4_A 146 RKEEYAEEALKAVAEGYDAVKVDVLAHDRNGSREGV---FLEGPLPSETIKIGVERVEAIRNAVGPDVDIIVENHGHTDL 222 (403)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSSSCTTSCCTTC---CCSSSCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTTCSCH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccccCCccccccC---cccCCCchHHHHHHHHHHHHHHHHhCCCCeEEEECCCCCCH
Confidence 8999998888775 5999999996 442111 1112122346678889999999987 57888888888999
Q ss_pred HHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhhhhccccCCCCC
Q psy4398 183 ADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNCAFLRNHYPVEK 262 (306)
Q Consensus 183 ~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v~vGrall~~p~ 262 (306)
+++.++++.+++.|+++|- ++. .+.+++..+++++.+++||++.+.+.+.++++++++.+. .-+-.+.
T Consensus 223 ~~ai~~~~~l~~~~i~~iE-------~P~-~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~----~d~v~ik 290 (403)
T 2ox4_A 223 VSAIQFAKAIEEFNIFFYE-------EIN-TPLNPRLLKEAKKKIDIPLASGERIYSRWGFLPFLEDRS----IDVIQPD 290 (403)
T ss_dssp HHHHHHHHHHGGGCEEEEE-------CCS-CTTSTHHHHHHHHTCCSCEEECTTCCHHHHHHHHHHTTC----CSEECCC
T ss_pred HHHHHHHHHHHhhCCCEEe-------CCC-ChhhHHHHHHHHHhCCCCEEecCCcCCHHHHHHHHHcCC----CCEEecC
Confidence 9999999999999998774 222 345889999999999999999999999999999987532 1111111
Q ss_pred chH-------HHHHHHHHhcCCCCC
Q psy4398 263 LPK-------TILYAHCKYKRFEVP 280 (306)
Q Consensus 263 ~~~-------~~l~~~~~~~g~~~~ 280 (306)
..+ +.+.+..+++|++..
T Consensus 291 ~~~~GGite~~~i~~~A~~~g~~~~ 315 (403)
T 2ox4_A 291 LGTCGGFTEFKKIADMAHIFEVTVQ 315 (403)
T ss_dssp HHHHTHHHHHHHHHHHHHHTTCEEC
T ss_pred ccccCCHHHHHHHHHHHHHcCCEEe
Confidence 111 255566677777733
No 104
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=98.69 E-value=3.6e-07 Score=85.15 Aligned_cols=125 Identities=10% Similarity=0.167 Sum_probs=104.0
Q ss_pred CceEEEecCCCHHHHHHHHHHHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEecc
Q psy4398 102 NKIILQIGTADPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIRV 178 (306)
Q Consensus 102 ~p~ivql~g~~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~ 178 (306)
.|+-.+++..+++++.+.++++. +||+.|.++++++ +++...+.++++|+++ ++++.+....
T Consensus 130 v~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g~~---------------~~~~d~~~v~avr~a~g~~~~l~vDan~ 194 (366)
T 1tkk_A 130 LETDYTVSVNSPEEMAADAENYLKQGFQTLKIKVGKD---------------DIATDIARIQEIRKRVGSAVKLRLDANQ 194 (366)
T ss_dssp EEBCEEECSCCHHHHHHHHHHHHHHTCCEEEEECCSS---------------CHHHHHHHHHHHHHHHCSSSEEEEECTT
T ss_pred eeeeEEecCCCHHHHHHHHHHHHHcCCCeEEEEeCCC---------------CHHHHHHHHHHHHHHhCCCCeEEEECCC
Confidence 34555677778999988888765 5999999998762 4677788999999987 5788888888
Q ss_pred CCChHHHHHHHHHHHH--cCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHh
Q psy4398 179 FHNEADTIALCKRLEA--CGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSL 249 (306)
Q Consensus 179 g~~~~~~~~~a~~l~~--~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~ 249 (306)
+|+.+++.++++.+++ .|+++|- ++. .+.+++..+++++.+++||++.+.+.+.++++++++.
T Consensus 195 ~~~~~~a~~~~~~l~~~~~~i~~iE-------qP~-~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~ 259 (366)
T 1tkk_A 195 GWRPKEAVTAIRKMEDAGLGIELVE-------QPV-HKDDLAGLKKVTDATDTPIMADESVFTPRQAFEVLQT 259 (366)
T ss_dssp CSCHHHHHHHHHHHHHTTCCEEEEE-------CCS-CTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhhcCCCceEEE-------CCC-CcccHHHHHHHHhhCCCCEEEcCCCCCHHHHHHHHHh
Confidence 8999999999999999 8887773 233 3568999999999999999999999999999999875
No 105
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=98.69 E-value=8.6e-08 Score=93.28 Aligned_cols=125 Identities=15% Similarity=0.096 Sum_probs=89.1
Q ss_pred HHHHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc-cccEEEEeccCCChHHHHHHHHH
Q psy4398 113 PERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL-SIPVSCKIRVFHNEADTIALCKR 191 (306)
Q Consensus 113 ~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~g~~~~~~~~~a~~ 191 (306)
.+.+..+...++.|+|.|.++..+|+ ...+.++++++++.. +.|+.++-- . ..+.|+.
T Consensus 255 ~d~~era~aLveaGvd~I~Id~a~g~---------------~~~v~~~i~~i~~~~~~~~vi~g~v--~----t~e~a~~ 313 (511)
T 3usb_A 255 ADAMTRIDALVKASVDAIVLDTAHGH---------------SQGVIDKVKEVRAKYPSLNIIAGNV--A----TAEATKA 313 (511)
T ss_dssp TTHHHHHHHHHHTTCSEEEEECSCTT---------------SHHHHHHHHHHHHHCTTSEEEEEEE--C----SHHHHHH
T ss_pred cchHHHHHHHHhhccceEEecccccc---------------hhhhhhHHHHHHHhCCCceEEeeee--c----cHHHHHH
Confidence 34455555556679999999977653 345677889998887 478887643 1 3566888
Q ss_pred HHHcCCcEEEEcccCCCC-------CCCCCCcHHHHHHHH---hhCCCcEEEecCCCCHHHHHHHHHhh---hhhccccC
Q psy4398 192 LEACGIIAIGVHGRTKAE-------RPRHRNRIEMIRTLT---QHLKIPVIANGGSKEIVDYGGVFSLN---CAFLRNHY 258 (306)
Q Consensus 192 l~~~G~d~i~v~~~~~~~-------~~~~p~~~~~v~~i~---~~~~ipvia~GGI~s~~~~~~~l~~~---v~vGrall 258 (306)
+.++|+|+|.+. ..... ...+.+.+..+.+++ +.+++|||+.|||.+..|+.++++.| |++||+++
T Consensus 314 ~~~aGad~i~vg-~g~gsi~~~~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kala~GA~~V~vGs~~~ 392 (511)
T 3usb_A 314 LIEAGANVVKVG-IGPGSICTTRVVAGVGVPQLTAVYDCATEARKHGIPVIADGGIKYSGDMVKALAAGAHVVMLGSMFA 392 (511)
T ss_dssp HHHHTCSEEEEC-SSCSTTCCHHHHHCCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTT
T ss_pred HHHhCCCEEEEC-CCCccccccccccCCCCCcHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHHhCchhheecHHHh
Confidence 999999999982 21111 012234666666654 44579999999999999999999875 49999985
Q ss_pred C
Q psy4398 259 P 259 (306)
Q Consensus 259 ~ 259 (306)
.
T Consensus 393 ~ 393 (511)
T 3usb_A 393 G 393 (511)
T ss_dssp T
T ss_pred c
Confidence 4
No 106
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=98.69 E-value=2e-07 Score=87.74 Aligned_cols=141 Identities=11% Similarity=0.186 Sum_probs=110.6
Q ss_pred CHHHHHHHHHHHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEeccCCChHHHHHH
Q psy4398 112 DPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIRVFHNEADTIAL 188 (306)
Q Consensus 112 ~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~~ 188 (306)
++++|.+.|+++. +||++|+++++. .+++...++++++|+++ ++++.+....+|+.+++.++
T Consensus 162 ~~e~~~~~a~~~~~~Gf~~vKik~g~---------------~~~~~~~e~v~avR~avg~d~~l~vDan~~~~~~~a~~~ 226 (393)
T 2og9_A 162 PIDQLMVNASASIERGIGGIKLKVGQ---------------PDGALDIARVTAVRKHLGDAVPLMVDANQQWDRPTAQRM 226 (393)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEECCC---------------SCHHHHHHHHHHHHHHHCTTSCEEEECTTCCCHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCC---------------CCHHHHHHHHHHHHHHcCCCCEEEEECCCCCCHHHHHHH
Confidence 8999999888775 599999998662 24788889999999987 57888888888999999999
Q ss_pred HHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhhhhccccCCCCCc-----
Q psy4398 189 CKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNCAFLRNHYPVEKL----- 263 (306)
Q Consensus 189 a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v~vGrall~~p~~----- 263 (306)
++.+++.|+++|- ++. .+.+++..+++++.+++||++.+.+.++++++++++.+. +-+-++..
T Consensus 227 ~~~l~~~~i~~iE-------~P~-~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~----~d~v~ik~~~~GG 294 (393)
T 2og9_A 227 CRIFEPFNLVWIE-------EPL-DAYDHEGHAALALQFDTPIATGEMLTSAAEHGDLIRHRA----ADYLMPDAPRVGG 294 (393)
T ss_dssp HHHHGGGCCSCEE-------CCS-CTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTC----CSEECCCHHHHTS
T ss_pred HHHHHhhCCCEEE-------CCC-CcccHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHCCC----CCEEeeCccccCC
Confidence 9999999999874 222 346899999999999999999999999999999988532 11111111
Q ss_pred --hHHHHHHHHHhcCCCC
Q psy4398 264 --PKTILYAHCKYKRFEV 279 (306)
Q Consensus 264 --~~~~l~~~~~~~g~~~ 279 (306)
.-+.+.++.+++|++.
T Consensus 295 it~~~~i~~~A~~~gi~~ 312 (393)
T 2og9_A 295 ITPFLKIASLAEHAGLML 312 (393)
T ss_dssp HHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHcCCEE
Confidence 1126667777888773
No 107
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=98.67 E-value=9.3e-07 Score=83.09 Aligned_cols=139 Identities=9% Similarity=0.005 Sum_probs=111.6
Q ss_pred CHHHHHHHHHHHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEeccCCChHHHHHH
Q psy4398 112 DPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIRVFHNEADTIAL 188 (306)
Q Consensus 112 ~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~~ 188 (306)
+++++.+.++++. +||+.|.|++|+ .+++...++++++|+++ ++++.+....+|+.+++.++
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~vKik~g~---------------~~~~~~~e~v~avR~a~G~~~~l~vDan~~~~~~~a~~~ 209 (389)
T 2oz8_A 145 DDDAFVSLFSHAASIGYSAFKIKVGH---------------RDFDRDLRRLELLKTCVPAGSKVMIDPNEAWTSKEALTK 209 (389)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCC---------------SSHHHHHHHHHHHHTTSCTTCEEEEECTTCBCHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCEEEEccCC---------------CCHHHHHHHHHHHHHhhCCCCeEEEECCCCCCHHHHHHH
Confidence 8899988888775 599999999876 24567789999999988 57788888878999999999
Q ss_pred HHHHHH--cCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhC-CCcEEEecCCCCHHHHHHHHHhh----hhhccccCCCC
Q psy4398 189 CKRLEA--CGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHL-KIPVIANGGSKEIVDYGGVFSLN----CAFLRNHYPVE 261 (306)
Q Consensus 189 a~~l~~--~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~-~ipvia~GGI~s~~~~~~~l~~~----v~vGrall~~p 261 (306)
++.+++ .++++|- ++. .+.+++..+++++.+ ++||++.+.+ +.++++++++.+ +++. +-
T Consensus 210 ~~~l~~~g~~i~~iE-------qP~-~~~~~~~~~~l~~~~~~iPIa~dE~~-~~~~~~~~i~~~~~d~v~ik-----GG 275 (389)
T 2oz8_A 210 LVAIREAGHDLLWVE-------DPI-LRHDHDGLRTLRHAVTWTQINSGEYL-DLQGKRLLLEAHAADILNVH-----GQ 275 (389)
T ss_dssp HHHHHHTTCCCSEEE-------SCB-CTTCHHHHHHHHHHCCSSEEEECTTC-CHHHHHHHHHTTCCSEEEEC-----SC
T ss_pred HHHHHhcCCCceEEe-------CCC-CCcCHHHHHHHHhhCCCCCEEeCCCC-CHHHHHHHHHcCCCCEEEEC-----cC
Confidence 999999 7777653 222 345899999999999 9999999999 999999999864 3554 22
Q ss_pred CchHHHHHHHHHhcCCCC
Q psy4398 262 KLPKTILYAHCKYKRFEV 279 (306)
Q Consensus 262 ~~~~~~l~~~~~~~g~~~ 279 (306)
...-+.+.++.+++|++.
T Consensus 276 it~a~~i~~~A~~~gi~~ 293 (389)
T 2oz8_A 276 VTDVMRIGWLAAELGIPI 293 (389)
T ss_dssp HHHHHHHHHHHHHHTCCE
T ss_pred HHHHHHHHHHHHHcCCeE
Confidence 233347778889999883
No 108
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=98.67 E-value=4.8e-08 Score=88.54 Aligned_cols=142 Identities=25% Similarity=0.336 Sum_probs=91.0
Q ss_pred CCceEEEecCCCHHHHHHHHHHHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEeccC
Q psy4398 101 KNKIILQIGTADPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVF 179 (306)
Q Consensus 101 ~~p~ivql~g~~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g 179 (306)
..++++.+.. .+.++.+. .|+++|+++.++|..... ..|....+.++ .++.+++.+++|+.++.+.+
T Consensus 21 ~~~~i~~~~~------~~~a~~~~~~Ga~~i~~~e~v~~~~~~--~~G~~~~~~~~----~i~~i~~~~~~Pvi~~~~~~ 88 (297)
T 2zbt_A 21 KGGVIMDVTT------PEQAVIAEEAGAVAVMALERVPADIRA--QGGVARMSDPK----IIKEIMAAVSIPVMAKVRIG 88 (297)
T ss_dssp TTEEEEEESS------HHHHHHHHHHTCSEEEECSSCHHHHHH--TTCCCCCCCHH----HHHHHHTTCSSCEEEEEETT
T ss_pred hCCeeeeech------HHHHHHHHHCCCcEEEeccccchHHHh--hcCCccCCCHH----HHHHHHHhcCCCeEEEeccC
Confidence 3578887754 45555554 499999997665542111 12334555554 45566777889998877643
Q ss_pred CChHHHHHHHHHHHHcCCcEE---------------------------------------------EEcccCCCCC----
Q psy4398 180 HNEADTIALCKRLEACGIIAI---------------------------------------------GVHGRTKAER---- 210 (306)
Q Consensus 180 ~~~~~~~~~a~~l~~~G~d~i---------------------------------------------~v~~~~~~~~---- 210 (306)
. .+.++.+.++|+|.| .+|+....+.
T Consensus 89 ~-----~~~~~~~~~aGad~v~~~~~~~~~~~~~~~~~~~~~i~l~~~v~~~~~~~~a~~~Gad~I~v~G~~~~g~~~e~ 163 (297)
T 2zbt_A 89 H-----FVEAMILEAIGVDFIDESEVLTPADEEHHIDKWKFKVPFVCGARNLGEALRRIAEGAAMIRTKGEAGTGNVVEA 163 (297)
T ss_dssp C-----HHHHHHHHHTTCSEEEEETTSCCSCSSCCCCGGGCSSCEEEEESSHHHHHHHHHTTCSEEEECCCSSSCCTHHH
T ss_pred C-----HHHHHHHHHCCCCEEeeeCCCChHHHHHHHHHhCCCceEEeecCCHHHHHHHHHcCCCEEEEcccccCcchHHH
Confidence 1 233444444555555 4332100000
Q ss_pred ----------------C----------CCCCcHHHHHHHHhhCCCcEE--EecCCCCHHHHHHHHHhh---hhhccccCC
Q psy4398 211 ----------------P----------RHRNRIEMIRTLTQHLKIPVI--ANGGSKEIVDYGGVFSLN---CAFLRNHYP 259 (306)
Q Consensus 211 ----------------~----------~~p~~~~~v~~i~~~~~ipvi--a~GGI~s~~~~~~~l~~~---v~vGrall~ 259 (306)
+ ..+.+++.++++++.+++|++ +.|||.|.+++.++++.| +++|++++.
T Consensus 164 ~~~~~~~~~~i~~~~g~t~~~~~~~~~~~~~~~~~i~~l~~~~~~pvi~~a~GGI~~~e~i~~~~~aGadgvvvGsai~~ 243 (297)
T 2zbt_A 164 VRHARTMWKEIRYVQSLREDELMAYAKEIGAPFELVKWVHDHGRLPVVNFAAGGIATPADAALMMHLGMDGVFVGSGIFK 243 (297)
T ss_dssp HHHHHHHHHHHHHHHHSCGGGHHHHHHHHTCCHHHHHHHHHHSSCSSCEEBCSSCCSHHHHHHHHHTTCSEEEECGGGGG
T ss_pred HhhHHHHHHHHHHcCCcCCCCchhhhhcchhhHHHHHHHHHhcCCCcEEEeeCCCCCHHHHHHHHHcCCCEEEEchHHhC
Confidence 0 013467889999998899998 999999999999999875 499999995
No 109
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=98.66 E-value=8.3e-07 Score=84.59 Aligned_cols=152 Identities=11% Similarity=0.135 Sum_probs=115.0
Q ss_pred CCHHHHHHHHHHHh-cCCCEEEEccCCCccccccCCcccc-ccCChHHHHHHHHHHHhcc--cccEEEEeccCCChHHHH
Q psy4398 111 ADPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAA-LLSTPDIACNILTTLISNL--SIPVSCKIRVFHNEADTI 186 (306)
Q Consensus 111 ~~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~-l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~ 186 (306)
.+++++++.++.+. +||..|-+++++|.... .|.. ..++++...++++++|+++ ++++.+....+|+.+++.
T Consensus 145 ~~~e~~~~~a~~~~~~Gf~~iKlk~g~~~~~~----~G~~~~~~~~~~d~e~v~avR~avG~d~~L~vDan~~~t~~~A~ 220 (433)
T 3rcy_A 145 TSADMAAESAADCVARGYTAVKFDPAGPYTLR----GGHMPAMTDISLSVEFCRKIRAAVGDKADLLFGTHGQFTTAGAI 220 (433)
T ss_dssp TCHHHHHHHHHHHHHTTCSEEEECCSCCCBTT----CCBCCCHHHHHHHHHHHHHHHHHHTTSSEEEECCCSCBCHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCCCcccc----cCCCcchhhHHHHHHHHHHHHHHhCCCCeEEEeCCCCCCHHHHH
Confidence 68899988888664 59999999999986421 2221 1235677888999999988 478888888789999999
Q ss_pred HHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhhhhccccCCCCCchH-
Q psy4398 187 ALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNCAFLRNHYPVEKLPK- 265 (306)
Q Consensus 187 ~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v~vGrall~~p~~~~- 265 (306)
++++.|++.|+++|. ++ ..+.+++..+++++.+++||++.+.+.+..+++++++.+. .-+-+|...+
T Consensus 221 ~~~~~Le~~~i~~iE-------eP-~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~g~----~D~v~~d~~~~ 288 (433)
T 3rcy_A 221 RLGQAIEPYSPLWYE-------EP-VPPDNVGAMAQVARAVRIPVATGERLTTKAEFAPVLREGA----AAILQPALGRA 288 (433)
T ss_dssp HHHHHHGGGCCSEEE-------CC-SCTTCHHHHHHHHHHSSSCEEECTTCCSHHHHHHHHHTTC----CSEECCCHHHH
T ss_pred HHHHHhhhcCCCEEE-------CC-CChhhHHHHHHHHhccCCCEEecCCCCCHHHHHHHHHcCC----CCEEEeCchhc
Confidence 999999999999985 22 2345889999999999999999999999999999987532 1112222222
Q ss_pred ------HHHHHHHHhcCCC
Q psy4398 266 ------TILYAHCKYKRFE 278 (306)
Q Consensus 266 ------~~l~~~~~~~g~~ 278 (306)
+.+.+..+++|++
T Consensus 289 GGit~~~kia~lA~~~gv~ 307 (433)
T 3rcy_A 289 GGIWEMKKVAAMAEVYNAQ 307 (433)
T ss_dssp THHHHHHHHHHHHHTTTCE
T ss_pred CCHHHHHHHHHHHHHcCCE
Confidence 2556667777876
No 110
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=98.66 E-value=1.7e-06 Score=83.21 Aligned_cols=127 Identities=14% Similarity=0.098 Sum_probs=88.8
Q ss_pred CCCHHHHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc-cccEEEEeccCCChHHHHHH
Q psy4398 110 TADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL-SIPVSCKIRVFHNEADTIAL 188 (306)
Q Consensus 110 g~~~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~g~~~~~~~~~ 188 (306)
|..++.+..+...+++|+|.|-|....- ..+.+.+.++.+++.. +++|.+.-- - +.+-
T Consensus 277 gv~~d~~eR~~aLv~AGvD~iviD~ahG---------------hs~~v~~~i~~ik~~~p~~~viaGNV--a----T~e~ 335 (556)
T 4af0_A 277 GTRPGDKDRLKLLAEAGLDVVVLDSSQG---------------NSVYQIEFIKWIKQTYPKIDVIAGNV--V----TREQ 335 (556)
T ss_dssp CSSHHHHHHHHHHHHTTCCEEEECCSCC---------------CSHHHHHHHHHHHHHCTTSEEEEEEE--C----SHHH
T ss_pred ccCccHHHHHHHHHhcCCcEEEEecccc---------------ccHHHHHHHHHHHhhCCcceEEeccc--c----CHHH
Confidence 4556777777777788999999975431 2355678889998876 567766544 2 3566
Q ss_pred HHHHHHcCCcEEEEc------ccCCCCCCCCCCcHHHHHH---HHhhCCCcEEEecCCCCHHHHHHHHHhhh---hhccc
Q psy4398 189 CKRLEACGIIAIGVH------GRTKAERPRHRNRIEMIRT---LTQHLKIPVIANGGSKEIVDYGGVFSLNC---AFLRN 256 (306)
Q Consensus 189 a~~l~~~G~d~i~v~------~~~~~~~~~~p~~~~~v~~---i~~~~~ipvia~GGI~s~~~~~~~l~~~v---~vGra 256 (306)
++.|.++|+|+|.|- +.++...-.+-+.+..+.+ .++.+++|||+-|||...-|+-+++.+|+ |+|+.
T Consensus 336 a~~Li~aGAD~vkVGiGpGSiCtTr~v~GvG~PQ~tAi~~~a~~a~~~~vpvIADGGI~~sGDi~KAlaaGAd~VMlGsl 415 (556)
T 4af0_A 336 AAQLIAAGADGLRIGMGSGSICITQEVMAVGRPQGTAVYAVAEFASRFGIPCIADGGIGNIGHIAKALALGASAVMMGGL 415 (556)
T ss_dssp HHHHHHHTCSEEEECSSCSTTBCCTTTCCSCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEEESTT
T ss_pred HHHHHHcCCCEEeecCCCCcccccccccCCCCcHHHHHHHHHHHHHHcCCCEEecCCcCcchHHHHHhhcCCCEEEEchh
Confidence 777888999999873 1222222223334544444 44455899999999999999999999865 88876
Q ss_pred c
Q psy4398 257 H 257 (306)
Q Consensus 257 l 257 (306)
|
T Consensus 416 l 416 (556)
T 4af0_A 416 L 416 (556)
T ss_dssp T
T ss_pred h
Confidence 5
No 111
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=98.66 E-value=9e-08 Score=101.49 Aligned_cols=131 Identities=11% Similarity=-0.005 Sum_probs=94.3
Q ss_pred ChHHHHHHHHHHHhcc-cccEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCC--------CCCCcHHHHHHH
Q psy4398 153 TPDIACNILTTLISNL-SIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERP--------RHRNRIEMIRTL 223 (306)
Q Consensus 153 ~~~~~~eiv~~v~~~~-~~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~--------~~p~~~~~v~~i 223 (306)
+++.+.++++.+++.. +.||.||+-.. ......|+.++++|+|+|++++....... .+.+....+.++
T Consensus 976 s~edl~~~I~~Lk~~~~~~PV~VKlv~~---~gi~~~A~~a~~AGAD~IvVsG~eGGTgasp~~~~~~~G~Pt~~aL~ev 1052 (1479)
T 1ea0_A 976 SIEDLAQLIYDLKQINPDAKVTVKLVSR---SGIGTIAAGVAKANADIILISGNSGGTGASPQTSIKFAGLPWEMGLSEV 1052 (1479)
T ss_dssp SHHHHHHHHHHHHHHCTTCEEEEEEECC---TTHHHHHHHHHHTTCSEEEEECTTCCCSSEETTHHHHSCCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCCEEEEEcCC---CChHHHHHHHHHcCCcEEEEcCCCCCCCCCchhhhcCCchhHHHHHHHH
Confidence 4677889999999988 88999999843 23455788899999999999876422111 122344566677
Q ss_pred HhhC-------CCcEEEecCCCCHHHHHHHHHhhh---hhccccCC----------------------CCC---------
Q psy4398 224 TQHL-------KIPVIANGGSKEIVDYGGVFSLNC---AFLRNHYP----------------------VEK--------- 262 (306)
Q Consensus 224 ~~~~-------~ipvia~GGI~s~~~~~~~l~~~v---~vGrall~----------------------~p~--------- 262 (306)
++.+ ++|||+.|||.+..|+.+++..|+ ++||+++. ||.
T Consensus 1053 ~~al~~~glr~~VpVIAdGGIrtG~DVakALaLGAdaV~iGTafL~a~gc~~~r~Ch~~~CP~Gvatqdp~l~~~~~gg~ 1132 (1479)
T 1ea0_A 1053 HQVLTLNRLRHRVRLRTDGGLKTGRDIVIAAMLGAEEFGIGTASLIAMGCIMVRQCHSNTCPVGVCVQDDKLRQKFVGTP 1132 (1479)
T ss_dssp HHHHHTTTCTTTSEEEEESSCCSHHHHHHHHHTTCSEEECCHHHHHHHTCCCCCCTTTTCCTTSSSCCCTTGGGSCCCCH
T ss_pred HHHHHHcCCCCCceEEEECCCCCHHHHHHHHHcCCCeeeEcHHHHHHHHHHHHhhccCCCCCceeEEeCHHHHhhcCCch
Confidence 6654 699999999999999999998764 88887643 232
Q ss_pred ------chH--HHHHHHHHhcCCC-CCcceehh
Q psy4398 263 ------LPK--TILYAHCKYKRFE-VPKYETVQ 286 (306)
Q Consensus 263 ------~~~--~~l~~~~~~~g~~-~~~~~~~~ 286 (306)
+.. .+|+++|...|+. +.++.++.
T Consensus 1133 e~V~n~l~~l~~ELr~~Ma~lG~~si~eL~g~~ 1165 (1479)
T 1ea0_A 1133 EKVVNLFTFLAEEVREILAGLGFRSLNEVIGRT 1165 (1479)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCSCSGGGTTCG
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCHHHHhCch
Confidence 111 2999999999976 55554443
No 112
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=98.65 E-value=2.1e-07 Score=87.21 Aligned_cols=151 Identities=9% Similarity=0.033 Sum_probs=115.8
Q ss_pred CCceEEEecCCCHHHHHHHHHHHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEec
Q psy4398 101 KNKIILQIGTADPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIR 177 (306)
Q Consensus 101 ~~p~ivql~g~~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir 177 (306)
..|+..++...+++++++.++.+. .||..|.+++|| +++.-.+.++++|+++ ++++.++..
T Consensus 134 ~v~~~~~~~~~~~e~~~~~a~~~~~~G~~~iKiK~G~----------------~~~~d~~~v~avR~a~g~~~~l~vDan 197 (378)
T 3eez_A 134 PRPIASSVGAKSVEETRAVIDRYRQRGYVAHSVKIGG----------------DVERDIARIRDVEDIREPGEIVLYDVN 197 (378)
T ss_dssp CEEBBCCBCSCCHHHHHHHHHHHHHTTCCEEEEECCS----------------CHHHHHHHHHHHTTSCCTTCEEEEECT
T ss_pred eEEEEEEecCCCHHHHHHHHHHHHhCCCCEEEeccCC----------------CHHHHHHHHHHHHHHcCCCceEEEECC
Confidence 456777788889999998888665 599999999886 3556678899999998 578999999
Q ss_pred cCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhh----hh
Q psy4398 178 VFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNC----AF 253 (306)
Q Consensus 178 ~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v----~v 253 (306)
.+|+.+++.++++.+++.|+ +|. ++. + +++..+++++.+++||++.+.+.+.++++++++.+. ++
T Consensus 198 ~~~~~~~a~~~~~~l~~~~i-~iE-------qP~--~-~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~i 266 (378)
T 3eez_A 198 RGWTRQQALRVMRATEDLHV-MFE-------QPG--E-TLDDIAAIRPLHSAPVSVDECLVTLQDAARVARDGLAEVFGI 266 (378)
T ss_dssp TCCCHHHHHHHHHHTGGGTC-CEE-------CCS--S-SHHHHHHTGGGCCCCEEECTTCCSHHHHHHHHHTTCCSEEEE
T ss_pred CCCCHHHHHHHHHHhccCCe-EEe-------cCC--C-CHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCCEEEe
Confidence 89999999999999999998 663 222 2 788999999999999999999999999999997532 22
Q ss_pred ccccCCCCCchHHHHHHHHHhcCCCC
Q psy4398 254 LRNHYPVEKLPKTILYAHCKYKRFEV 279 (306)
Q Consensus 254 Grall~~p~~~~~~l~~~~~~~g~~~ 279 (306)
-..-.-+ ...-..+.++.+++|++.
T Consensus 267 k~~~~GG-it~~~~ia~~A~~~g~~~ 291 (378)
T 3eez_A 267 KLNRVGG-LTRAARMRDIALTHGIDM 291 (378)
T ss_dssp EHHHHTS-HHHHHHHHHHHHHTTCEE
T ss_pred CchhcCC-HHHHHHHHHHHHHcCCEE
Confidence 1111111 112225667777778773
No 113
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=98.63 E-value=4.7e-07 Score=85.35 Aligned_cols=124 Identities=14% Similarity=0.195 Sum_probs=102.4
Q ss_pred CceEEEecCCCHHHHHHHHHHHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEecc
Q psy4398 102 NKIILQIGTADPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIRV 178 (306)
Q Consensus 102 ~p~ivql~g~~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~ 178 (306)
.|+...++..+++++.+.++++. +||+.|.+++++ +++...++++++|+.+ ++++.+....
T Consensus 135 vp~~~~~g~~~~e~~~~~a~~~~~~Gf~~vKik~g~----------------~~~~~~e~v~avR~a~g~d~~l~vDan~ 198 (397)
T 2qde_A 135 IPLGLVLGAGEPEAVAEEALAVLREGFHFVKLKAGG----------------PLKADIAMVAEVRRAVGDDVDLFIDING 198 (397)
T ss_dssp EEBCEECCCSCHHHHHHHHHHHHHHTCSCEEEECCS----------------CHHHHHHHHHHHHHHHCTTSCEEEECTT
T ss_pred cceEEECCCCCHHHHHHHHHHHHHhhhhheeecccC----------------CHHHHHHHHHHHHHhhCCCCEEEEECCC
Confidence 45554554468999988888775 599999998762 4577788999999987 5788888888
Q ss_pred CCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHh
Q psy4398 179 FHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSL 249 (306)
Q Consensus 179 g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~ 249 (306)
+|+.+++.++++.+++.|++.|- ++. .+.+++..+++++.+++||++.+.+.+.++++++++.
T Consensus 199 ~~~~~~a~~~~~~l~~~~i~~iE-------qP~-~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~ 261 (397)
T 2qde_A 199 AWTYDQALTTIRALEKYNLSKIE-------QPL-PAWDLDGMARLRGKVATPIYADESAQELHDLLAIINK 261 (397)
T ss_dssp CCCHHHHHHHHHHHGGGCCSCEE-------CCS-CTTCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhCCCCEEE-------CCC-ChhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHc
Confidence 89999999999999999999874 222 3468999999999999999999999999999999875
No 114
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=98.62 E-value=5.2e-07 Score=85.27 Aligned_cols=155 Identities=14% Similarity=0.148 Sum_probs=112.5
Q ss_pred CHHHHHHHHHHHh-cCCCEEEEcc------CCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEeccCCCh
Q psy4398 112 DPERALEAAKKVE-HDVAAIDINM------GCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIRVFHNE 182 (306)
Q Consensus 112 ~~~~~~~aa~~~~-~g~d~veln~------gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~ 182 (306)
++++|.+.|+++. +||+.|.++. |+... ....|....++++...++++++|+++ ++++.+....+|+.
T Consensus 152 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~---s~~~~~~~~~~~~~~~e~v~avR~a~G~d~~l~vDan~~~~~ 228 (407)
T 2o56_A 152 EPEQYAQAALTAVSEGYDAIKVDTVAMDRHGNWNQ---QNLNGPLTDKILRLGYDRMAAIRDAVGPDVDIIAEMHAFTDT 228 (407)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSSBCTTSCBSC---SCCCSSCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTTCSCH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcccccCCcCcccc---CcccCCCchhHHHHHHHHHHHHHHhcCCCCEEEEECCCCCCH
Confidence 7999999888775 5999999986 43210 01111111346678889999999987 57888888878999
Q ss_pred HHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhhhhccccCCCC-
Q psy4398 183 ADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNCAFLRNHYPVE- 261 (306)
Q Consensus 183 ~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v~vGrall~~p- 261 (306)
+++.++++.+++.|+++|- ++ ..+.+++..+++++.+++||++.+.+.+.++++++++.+. ...+.-++
T Consensus 229 ~~a~~~~~~l~~~~i~~iE-------~P-~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~--~d~v~ik~~ 298 (407)
T 2o56_A 229 TSAIQFGRMIEELGIFYYE-------EP-VMPLNPAQMKQVADKVNIPLAAGERIYWRWGYRPFLENGS--LSVIQPDIC 298 (407)
T ss_dssp HHHHHHHHHHGGGCCSCEE-------CS-SCSSSHHHHHHHHHHCCSCEEECTTCCHHHHHHHHHHTTC--CSEECCCTT
T ss_pred HHHHHHHHHHHhcCCCEEe-------CC-CChhhHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHcCC--CCEEecCcc
Confidence 9999999999999999874 22 2346899999999999999999999999999999987532 01111122
Q ss_pred Cc----hHHHHHHHHHhcCCCC
Q psy4398 262 KL----PKTILYAHCKYKRFEV 279 (306)
Q Consensus 262 ~~----~~~~l~~~~~~~g~~~ 279 (306)
.+ .-+.+.+..+++|++.
T Consensus 299 ~~GGite~~~i~~~A~~~g~~~ 320 (407)
T 2o56_A 299 TCGGITEVKKICDMAHVYDKTV 320 (407)
T ss_dssp TTTHHHHHHHHHHHHHTTTCEE
T ss_pred ccCCHHHHHHHHHHHHHcCCeE
Confidence 11 1126666777778773
No 115
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=98.60 E-value=1.4e-06 Score=81.86 Aligned_cols=142 Identities=8% Similarity=-0.041 Sum_probs=111.9
Q ss_pred CHHHHHHHHHHHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEeccCCChHHHHHH
Q psy4398 112 DPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIRVFHNEADTIAL 188 (306)
Q Consensus 112 ~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~~ 188 (306)
+++++.+.++++. +||+.|.|+++++ +++...++++++|+++ ++++.+....+|+.+++.++
T Consensus 165 ~~~~~~~~a~~~~~~Gf~~iKik~g~~---------------~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~ 229 (392)
T 1tzz_A 165 GLSMLRGEMRGYLDRGYNVVKMKIGGA---------------PIEEDRMRIEAVLEEIGKDAQLAVDANGRFNLETGIAY 229 (392)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEEECSSS---------------CHHHHHHHHHHHHHHHTTTCEEEEECTTCCCHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCC---------------CHHHHHHHHHHHHHhcCCCCeEEEECCCCCCHHHHHHH
Confidence 7889988888765 5999999998762 3577788999999887 47788888878999999999
Q ss_pred HHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhh----hhhccccCCCC-Cc
Q psy4398 189 CKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLN----CAFLRNHYPVE-KL 263 (306)
Q Consensus 189 a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~----v~vGrall~~p-~~ 263 (306)
++.+++.|+++|- ++. .+.+++..+++++.+++||++.+.+.+.++++++++.+ . ...+.-++ .+
T Consensus 230 ~~~l~~~~i~~iE-------qP~-~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~~~~--~d~v~ik~~~~ 299 (392)
T 1tzz_A 230 AKMLRDYPLFWYE-------EVG-DPLDYALQAALAEFYPGPMATGENLFSHQDARNLLRYGGMRPD--RDWLQFDCALS 299 (392)
T ss_dssp HHHHTTSCCSEEE-------CCS-CTTCHHHHHHHTTTCCSCEEECTTCCSHHHHHHHHHHSCCCTT--TCEECCCTTTT
T ss_pred HHHHHHcCCCeec-------CCC-ChhhHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCccC--CcEEEECcccc
Confidence 9999999999874 222 24689999999999999999999999999999998864 2 11122233 22
Q ss_pred ----hHHHHHHHHHhcCCC
Q psy4398 264 ----PKTILYAHCKYKRFE 278 (306)
Q Consensus 264 ----~~~~l~~~~~~~g~~ 278 (306)
.-+.+.++.+++|++
T Consensus 300 GGit~~~~i~~~A~~~gi~ 318 (392)
T 1tzz_A 300 YGLCEYQRTLEVLKTHGWS 318 (392)
T ss_dssp TCHHHHHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHHHHCCCC
Confidence 223777888999988
No 116
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=98.60 E-value=3e-07 Score=81.77 Aligned_cols=150 Identities=15% Similarity=0.161 Sum_probs=97.4
Q ss_pred ceEEEecCCCH--HHHHHHHHHHhc-CCCEEEEccCCCccccccCCccccc----------cCChHHHHHHHHHHHhccc
Q psy4398 103 KIILQIGTADP--ERALEAAKKVEH-DVAAIDINMGCPKQFSLTGGMGAAL----------LSTPDIACNILTTLISNLS 169 (306)
Q Consensus 103 p~ivql~g~~~--~~~~~aa~~~~~-g~d~veln~gcP~~~~~~~~~G~~l----------~~~~~~~~eiv~~v~~~~~ 169 (306)
.++..|...++ +++.+.++.+.+ |+|.|||+..++.+.. | |..+ .-+++...++++++++.++
T Consensus 19 ~~~~~i~~g~~~~~~~~~~~~~l~~~Gad~ielg~p~~dp~~--d--g~~i~~a~~~al~~g~~~~~~~~~i~~ir~~~~ 94 (262)
T 1rd5_A 19 AFIPYITAGDPDLATTAEALRLLDGCGADVIELGVPCSDPYI--D--GPIIQASVARALASGTTMDAVLEMLREVTPELS 94 (262)
T ss_dssp EEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTT--S--CHHHHHHHHHHHTTTCCHHHHHHHHHHHGGGCS
T ss_pred eEEEEeeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCccc--C--CHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCC
Confidence 46667655554 888888887765 9999999876643211 1 1111 0267888899999999889
Q ss_pred ccEEEEeccCCChHHHHHHHHHHHHcCCcEEEEccc--------------------------CC-----------C----
Q psy4398 170 IPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGR--------------------------TK-----------A---- 208 (306)
Q Consensus 170 ~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~--------------------------~~-----------~---- 208 (306)
+|+.+... ++.... ...+.+.++|+|++++++. +. .
T Consensus 95 ~Pv~~m~~--~~~~~~-~~~~~a~~aGadgv~v~d~~~~~~~~~~~~~~~~g~~~i~~~a~~t~~e~~~~~~~~~~g~v~ 171 (262)
T 1rd5_A 95 CPVVLLSY--YKPIMF-RSLAKMKEAGVHGLIVPDLPYVAAHSLWSEAKNNNLELVLLTTPAIPEDRMKEITKASEGFVY 171 (262)
T ss_dssp SCEEEECC--SHHHHS-CCTHHHHHTTCCEEECTTCBTTTHHHHHHHHHHTTCEECEEECTTSCHHHHHHHHHHCCSCEE
T ss_pred CCEEEEec--CcHHHH-HHHHHHHHcCCCEEEEcCCChhhHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHhcCCCeEE
Confidence 99887543 221110 0011245556665554321 10 0
Q ss_pred ----CCCCC------CCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhh---hhhccccCC
Q psy4398 209 ----ERPRH------RNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLN---CAFLRNHYP 259 (306)
Q Consensus 209 ----~~~~~------p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~---v~vGrall~ 259 (306)
..+.+ +..+++++++++.+++||++.|||+|.+++.++++.| +.+|++++.
T Consensus 172 ~~s~~G~tG~~~~~~~~~~~~i~~v~~~~~~pI~vgGGI~~~e~~~~~~~~GAdgvvVGSai~~ 235 (262)
T 1rd5_A 172 LVSVNGVTGPRANVNPRVESLIQEVKKVTNKPVAVGFGISKPEHVKQIAQWGADGVIIGSAMVR 235 (262)
T ss_dssp EECSSCCBCTTSCBCTHHHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCSEEEECHHHHH
T ss_pred EecCCCCCCCCcCCCchHHHHHHHHHhhcCCeEEEECCcCCHHHHHHHHHcCCCEEEEChHHHh
Confidence 00011 2245688999999999999999999999999998875 489999874
No 117
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G*
Probab=98.60 E-value=3.9e-07 Score=100.26 Aligned_cols=234 Identities=12% Similarity=0.088 Sum_probs=140.1
Q ss_pred ccccccccCCceEEccCCC-CCCHHHHHHHHHcCC-CEEEe-cceechhhhhhhhhhhcccccccccCCCCCceeeecCC
Q psy4398 22 ANQANINYSNKIILAPMVR-MNTLPFRLLALDYGA-DLVYS-EELVDHKLVKTERKVNDLLNTIDFVDPLDGSVVFRTCP 98 (306)
Q Consensus 22 ~~~~~l~l~n~i~lAPm~~-~t~~~~r~~~~~~G~-g~~~t-e~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 98 (306)
+++..+.=+.||++|||.. .++..+...+.++|. |.+-. .+.+++.+....+....+ .
T Consensus 581 t~~t~llg~~PIi~~gM~~~~~~~~lvaAvsnAGglg~l~~~~~~~~e~l~~~I~~~~~~------------------t- 641 (2051)
T 2uv8_G 581 TKFSKLIGRPPLLVPGMTPCTVSPDFVAATTNAGYTIELAGGGYFSAAGMTAAIDSVVSQ------------------I- 641 (2051)
T ss_dssp CHHHHHHSSCSEEECCCHHHHTCHHHHHHHHHTTCEEEEEGGGCCSHHHHHHHHHHHHHH------------------S-
T ss_pred HHHHHhhCccceecCCCccccccHHHHHHHHcCCcEEEEccCCCCCHHHHHHHHHHHHHh------------------c-
Confidence 4444444468999999994 458888887777774 55533 233333333222221111 1
Q ss_pred CCCCceEEEecCCCHHHH---HHHHHHH-hcCCCE--EEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccE
Q psy4398 99 REKNKIILQIGTADPERA---LEAAKKV-EHDVAA--IDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPV 172 (306)
Q Consensus 99 ~~~~p~ivql~g~~~~~~---~~aa~~~-~~g~d~--veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv 172 (306)
..+.|+.+++.-.++..+ .+..+.+ ++|... |.+..|.|. .+...++++.+ ++++
T Consensus 642 ~~~~~~gvN~~~~~~~~~~~~~~~~~~~~~~gv~i~~v~~~ag~p~---------------~~~~~~~i~~l----G~~v 702 (2051)
T 2uv8_G 642 EKGSTFGINLIYVNPFMLQWGIPLIKELRSKGYPIQFLTIGAGVPS---------------LEVASEYIETL----GLKY 702 (2051)
T ss_dssp CTTCCEEEEEETTCTTHHHHHHHHHHHHHHTTCSEEEEEEESSCCC---------------HHHHHHHHHHS----CCSC
T ss_pred CCCCceEEEEeecChhhhhhhHHHHHHHHHcCCCcceEEecCCCCc---------------hhhHHHHHHHc----CCEE
Confidence 125689999876555311 2444544 458665 888777665 22333444443 7777
Q ss_pred EEEeccCCChHHHHHHHHHHHHcCCcEE---EEcccCCCCCCCCC-----CcHHHHHHHHhhCCCcEEEecCCCCHHHHH
Q psy4398 173 SCKIRVFHNEADTIALCKRLEACGIIAI---GVHGRTKAERPRHR-----NRIEMIRTLTQHLKIPVIANGGSKEIVDYG 244 (306)
Q Consensus 173 ~vKir~g~~~~~~~~~a~~l~~~G~d~i---~v~~~~~~~~~~~p-----~~~~~v~~i~~~~~ipvia~GGI~s~~~~~ 244 (306)
..... .....++.+...+++|+|.+ ++.|....+ +.+. ..+.++.+|++.++||||+.|||.|.+.+.
T Consensus 703 i~~~~---~~~~a~~~~~~~~~~g~d~~ii~~~~G~eaGG-H~g~~d~~~~~l~l~~~v~~~~~ipviaaGGi~dg~~~~ 778 (2051)
T 2uv8_G 703 LGLKP---GSIDAISQVINIAKAHPNFPIALQWTGGRGGG-HHSFEDAHTPMLQMYSKIRRHPNIMLIFGSGFGSADDTY 778 (2051)
T ss_dssp EEECC---CSHHHHHHHHHHHHHSTTSCEEEEECCSSCSE-ECCSCCSSHHHHHHHHHHTTCTTBCCEEESSCCSHHHHT
T ss_pred EEecC---chHHHHHHHHHHHHhCCCceeEEEEEccCcCC-CCCcccccccHHHHHHHHHhcCCceEEEeCCCCCHHHHH
Confidence 65443 24567788888999999994 455554333 2222 134568999999999999999999999999
Q ss_pred HHH-----------Hh---hhhhccccCCCCCc-hHHHHHHH-HHhcCCCCCcceehhhccceeeEEEEc
Q psy4398 245 GVF-----------SL---NCAFLRNHYPVEKL-PKTILYAH-CKYKRFEVPKYETVQYEKLFRSLVTVN 298 (306)
Q Consensus 245 ~~l-----------~~---~v~vGrall~~p~~-~~~~l~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~ 298 (306)
.++ .+ |++||+.++.=.+. .....++. ++..+.+-..|. +.+.+.-.++.+.|
T Consensus 779 aaL~g~w~~~~g~~~lgadGv~~GTrf~~t~Ea~~~~~~K~~iv~a~~~d~~~w~-~~~~~~~gG~~~~~ 847 (2051)
T 2uv8_G 779 PYLTGEWSTKFDYPPMPFDGFLFGSRVMIAKEVKTSPDAKKCIAACTGVPDDKWE-QTYKKPTGGIVTVR 847 (2051)
T ss_dssp HHHHTCGGGTTTCCCCCCSCEECSGGGTTSTTSCCCHHHHHHHHTCCCCCGGGGG-GGGTSCCSSEEEEE
T ss_pred HHHccccccccCccCCCCceeeechHHHhCcccccCHHHHHHHHhCCCCcccchh-hccccCcCcEEEEe
Confidence 988 33 56999999875422 22345554 444443322222 22433344444444
No 118
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=98.59 E-value=6.6e-07 Score=84.39 Aligned_cols=143 Identities=14% Similarity=0.125 Sum_probs=110.3
Q ss_pred CHHHHHHHHHHHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEeccCCChHHHHHH
Q psy4398 112 DPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIRVFHNEADTIAL 188 (306)
Q Consensus 112 ~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~~ 188 (306)
+++++.+.++++. +||+.|.+++|. .+++...++++++|+++ ++++.+....+|+.+++.++
T Consensus 175 ~~e~~~~~a~~~~~~Gf~~vKik~g~---------------~~~~~d~e~v~avR~avG~d~~l~vDan~~~~~~~ai~~ 239 (398)
T 2pp0_A 175 PLDQVLKNVVISRENGIGGIKLKVGQ---------------PNCAEDIRRLTAVREALGDEFPLMVDANQQWDRETAIRM 239 (398)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEECCC---------------SCHHHHHHHHHHHHHHHCSSSCEEEECTTCSCHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCeEEEecCC---------------CCHHHHHHHHHHHHHHcCCCCeEEEECCCCCCHHHHHHH
Confidence 7999988888775 599999998763 24778889999999987 57888888888999999999
Q ss_pred HHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhhhhccccCCCC-----Cc
Q psy4398 189 CKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNCAFLRNHYPVE-----KL 263 (306)
Q Consensus 189 a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v~vGrall~~p-----~~ 263 (306)
++.+++.|++.|- ++. .+.+++..+++++.+++||++.+.+.+.++++++++.+. ...+.-++ ..
T Consensus 240 ~~~l~~~~i~~iE-------qP~-~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~--~d~v~ik~~~~GGit 309 (398)
T 2pp0_A 240 GRKMEQFNLIWIE-------EPL-DAYDIEGHAQLAAALDTPIATGEMLTSFREHEQLILGNA--SDFVQPDAPRVGGIS 309 (398)
T ss_dssp HHHHGGGTCSCEE-------CCS-CTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTC--CSEECCCHHHHTSHH
T ss_pred HHHHHHcCCceee-------CCC-ChhhHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCC--CCEEEeCccccCCHH
Confidence 9999999999874 222 346899999999999999999999999999999987532 00111111 01
Q ss_pred hHHHHHHHHHhcCCCC
Q psy4398 264 PKTILYAHCKYKRFEV 279 (306)
Q Consensus 264 ~~~~l~~~~~~~g~~~ 279 (306)
.-+.+.++.+++|++.
T Consensus 310 e~~~i~~~A~~~gi~~ 325 (398)
T 2pp0_A 310 PFLKIMDLAAKHGRKL 325 (398)
T ss_dssp HHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHcCCeE
Confidence 1126667777888773
No 119
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=98.56 E-value=1.6e-06 Score=82.62 Aligned_cols=142 Identities=14% Similarity=0.133 Sum_probs=109.1
Q ss_pred CCH-HHHHHHHHHHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEeccCCChHHHH
Q psy4398 111 ADP-ERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIRVFHNEADTI 186 (306)
Q Consensus 111 ~~~-~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~ 186 (306)
.++ +++.+.|+++. +||+.|.+++++ +++...++++++|+++ ++++.+....+|+.+++.
T Consensus 183 ~~~~e~~~~~a~~~~~~Gf~~vKik~g~----------------~~~~d~e~v~avR~avG~d~~l~vDan~~~~~~eai 246 (428)
T 3bjs_A 183 YQPKESLAEEAQEYIARGYKALKLRIGD----------------AARVDIERVRHVRKVLGDEVDILTDANTAYTMADAR 246 (428)
T ss_dssp SCCHHHHHHHHHHHHHHTCSEEEEECCS----------------CHHHHHHHHHHHHHHHCTTSEEEEECTTCCCHHHHH
T ss_pred CChHHHHHHHHHHHHHCCCCEEEECCCC----------------CHHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHHHH
Confidence 567 88888888765 599999998764 4677788999999987 577888887789999999
Q ss_pred HHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCC-CcEEEecCCCCHHHHHHHHHhhhhhccccCCCC-C--
Q psy4398 187 ALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLK-IPVIANGGSKEIVDYGGVFSLNCAFLRNHYPVE-K-- 262 (306)
Q Consensus 187 ~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~-ipvia~GGI~s~~~~~~~l~~~v~vGrall~~p-~-- 262 (306)
++++.+++.|++.|- ++. .+.+++..+++++.++ +||++.+.+.+.++++++++.+. ...+.-++ .
T Consensus 247 ~~~~~L~~~~i~~iE-------qP~-~~~d~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~~~--~d~v~ik~~~~G 316 (428)
T 3bjs_A 247 RVLPVLAEIQAGWLE-------EPF-ACNDFASYREVAKITPLVPIAAGENHYTRFEFGQMLDAGA--VQVWQPDLSKCG 316 (428)
T ss_dssp HHHHHHHHTTCSCEE-------CCS-CTTCHHHHHHHTTTCSSSCEEECTTCCSHHHHHHHHTTCC--EEEECCBTTTSS
T ss_pred HHHHHHHhcCCCEEE-------CCC-CccCHHHHHHHHHhCCCCcEEcCCCcCCHHHHHHHHHhCC--CCEEEeCccccC
Confidence 999999999999874 222 3458999999999998 99999999999999999987532 00111122 1
Q ss_pred --chHHHHHHHHHhcCCC
Q psy4398 263 --LPKTILYAHCKYKRFE 278 (306)
Q Consensus 263 --~~~~~l~~~~~~~g~~ 278 (306)
..-+.+.+..+++|++
T Consensus 317 Gitea~~ia~~A~~~gi~ 334 (428)
T 3bjs_A 317 GITEGIRIAAMASAYRIP 334 (428)
T ss_dssp CHHHHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHHHcCCe
Confidence 1223666777788877
No 120
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=98.56 E-value=1.3e-06 Score=82.51 Aligned_cols=162 Identities=15% Similarity=0.135 Sum_probs=119.4
Q ss_pred CCceEEEecCCCHHHHHHHHHHHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEec
Q psy4398 101 KNKIILQIGTADPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIR 177 (306)
Q Consensus 101 ~~p~ivql~g~~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir 177 (306)
..|+-..+++.+++++++.++.+. +||..+-+ .|+|.... .....+++.-.++++++|+++ ++++.+...
T Consensus 114 ~v~~y~~~~~~~~e~~~~~a~~~~~~G~~~iKl-~G~~~~~~------~~~~~~~~~d~e~v~avR~avG~d~~L~vDaN 186 (405)
T 3rr1_A 114 KMRTYSWVGGDRPADVIAGMKALQAGGFDHFKL-NGCEEMGI------IDTSRAVDAAVARVAEIRSAFGNTVEFGLDFH 186 (405)
T ss_dssp CEEEEEECCCSSHHHHHHHHHHHHHTTCCEEEE-ESCCSSSC------BCSHHHHHHHHHHHHHHHHTTGGGSEEEEECC
T ss_pred ceeeeEeCCCCCHHHHHHHHHHHHHcCCCEEEE-ecCCcccc------cccchhHHHHHHHHHHHHHHhCCCceEEEECC
Confidence 467777788889999998888664 59999999 88764211 011224566678999999998 578888888
Q ss_pred cCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhhhhcccc
Q psy4398 178 VFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNCAFLRNH 257 (306)
Q Consensus 178 ~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v~vGral 257 (306)
.+|+.+++.++++.|++.|+++|. ++. .+.+++..+++++.+++||++.+.+.+..+++++++.+. ...+
T Consensus 187 ~~~~~~~A~~~~~~L~~~~i~~iE-------eP~-~~~d~~~~~~l~~~~~iPIa~dE~i~~~~~~~~~l~~~a--~d~v 256 (405)
T 3rr1_A 187 GRVSAPMAKVLIKELEPYRPLFIE-------EPV-LAEQAETYARLAAHTHLPIAAGERMFSRFDFKRVLEAGG--VSIL 256 (405)
T ss_dssp SCBCHHHHHHHHHHHGGGCCSCEE-------CSS-CCSSTHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHHCC--CSEE
T ss_pred CCCCHHHHHHHHHHHHhcCCCEEE-------CCC-CcccHHHHHHHHhcCCCCEEecCCcCCHHHHHHHHHHhC--CCeE
Confidence 889999999999999999999885 222 345789999999999999999999999999999987532 0001
Q ss_pred CCCC-Cc----hHHHHHHHHHhcCCCC
Q psy4398 258 YPVE-KL----PKTILYAHCKYKRFEV 279 (306)
Q Consensus 258 l~~p-~~----~~~~l~~~~~~~g~~~ 279 (306)
.-++ .+ .-+.+.+..+++|++.
T Consensus 257 ~~d~~~~GGitea~kia~lA~~~gi~v 283 (405)
T 3rr1_A 257 QPDLSHAGGITECVKIAAMAEAYDVAL 283 (405)
T ss_dssp CCBTTTTTHHHHHHHHHHHHHTTTCEE
T ss_pred EEChhhcCCHHHHHHHHHHHHHcCCEE
Confidence 1122 11 1125666777778773
No 121
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=98.55 E-value=7.4e-07 Score=83.59 Aligned_cols=125 Identities=14% Similarity=0.138 Sum_probs=101.5
Q ss_pred CceEEEecC--CCH---HHHHHHHHHHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEE
Q psy4398 102 NKIILQIGT--ADP---ERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVS 173 (306)
Q Consensus 102 ~p~ivql~g--~~~---~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~ 173 (306)
.|+...++. .++ +++.+.++++. +||+.|.+++++ .+++...++++++|+++ ++++.
T Consensus 124 vp~~~~~g~~~~~~~~~e~~~~~a~~~~~~Gf~~vKik~g~---------------~~~~~d~e~v~avR~a~G~d~~l~ 188 (382)
T 2gdq_A 124 IPVYASFQSYSDSPQWISRSVSNVEAQLKKGFEQIKVKIGG---------------TSFKEDVRHINALQHTAGSSITMI 188 (382)
T ss_dssp EEEEEECCCBCSSTTHHHHHHHHHHHHHTTTCCEEEEECSS---------------SCHHHHHHHHHHHHHHHCTTSEEE
T ss_pred eeEEEEecccCCCcccHHHHHHHHHHHHHcCCCEEEEcCCC---------------CCHHHHHHHHHHHHHhhCCCCEEE
Confidence 344444422 577 88988888775 599999999775 24677889999999988 57888
Q ss_pred EEeccCCChHHHHHHHHHHHHc-CCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHh
Q psy4398 174 CKIRVFHNEADTIALCKRLEAC-GIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSL 249 (306)
Q Consensus 174 vKir~g~~~~~~~~~a~~l~~~-G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~ 249 (306)
+....+|+.+++.++++.+++. |+++|- ++. .+.+++..+++++.+++||++.+.+.+.++++++++.
T Consensus 189 vDan~~~~~~~a~~~~~~l~~~~~i~~iE-------qP~-~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~ 257 (382)
T 2gdq_A 189 LDANQSYDAAAAFKWERYFSEWTNIGWLE-------EPL-PFDQPQDYAMLRSRLSVPVAGGENMKGPAQYVPLLSQ 257 (382)
T ss_dssp EECTTCCCHHHHHTTHHHHTTCSCEEEEE-------CCS-CSSCHHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHT
T ss_pred EECCCCCCHHHHHHHHHHHhhccCCeEEE-------CCC-CcccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHc
Confidence 8888889999999999999999 888763 222 3458999999999999999999999999999999875
No 122
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=98.52 E-value=9.3e-06 Score=71.40 Aligned_cols=203 Identities=12% Similarity=0.045 Sum_probs=128.6
Q ss_pred ccccccccCCceEEccCCCCCCHHHHHHHHHcCCCEEEecceechhhhhhhhhhhcccccccccCCCCCceeeecCCCCC
Q psy4398 22 ANQANINYSNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDGSVVFRTCPREK 101 (306)
Q Consensus 22 ~~~~~l~l~n~i~lAPm~~~t~~~~r~~~~~~G~g~~~te~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 101 (306)
.+|++.+|..|+++-.+--.+...++......|+.++..-+-..+.. ...... +.+.++ +
T Consensus 4 l~i~~~~~~srl~~Gtgky~~~~~~~~ai~asg~eivtva~rR~~~~---~~~~~~---------------~~~~i~--~ 63 (268)
T 2htm_A 4 WKVGPVELKSRLILGSGKYEDFGVMREAIAAAKAEVVTVSVRRVELK---APGHVG---------------LLEALE--G 63 (268)
T ss_dssp EEETTEEECCSEEEECSSCSCHHHHHHHHHHTTCSEEEEEEEECC----------C---------------HHHHTT--T
T ss_pred eEECCEEeecceEEecCCCCCHHHHHHHHHHhCCCEEEEEccccCCC---CCCccc---------------HHHHHh--h
Confidence 67899999999999888744444566666788988776653211100 000011 122232 4
Q ss_pred CceEEEec-CCCHHHHHHHHHHHhc--CCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEecc
Q psy4398 102 NKIILQIG-TADPERALEAAKKVEH--DVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRV 178 (306)
Q Consensus 102 ~p~ivql~-g~~~~~~~~aa~~~~~--g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~ 178 (306)
.++..+-. ..+.++...+++.+.+ |-+-|-|..-.- .. .+.-|+..+.+-.+.+.+. ++.+...+.
T Consensus 64 ~~~lpntaG~~taeeAv~~a~lare~~gt~~iKlEvi~d------~~---~l~pD~~~tv~aa~~L~k~-Gf~Vlpy~~- 132 (268)
T 2htm_A 64 VRLLPNTAGARTAEEAVRLARLGRLLTGERWVKLEVIPD------PT---YLLPDPLETLKAAERLIEE-DFLVLPYMG- 132 (268)
T ss_dssp SEEEEBCTTCCSHHHHHHHHHHHHHHHCCSEEBCCCCSC------TT---TTCCCHHHHHHHHHHHHHT-TCEECCEEC-
T ss_pred hhccCcccCCCCHHHHHHHHHhhhHhcCcceeeeeeccC------cc---ccCcCHHHHHHHHHHHHHC-CCEEeeccC-
Confidence 45666654 4789999999987765 777765543321 11 2445555555555544332 433333343
Q ss_pred CCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHh-hCC-CcEEEecCCCCHHHHHHHHHhh---hhh
Q psy4398 179 FHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQ-HLK-IPVIANGGSKEIVDYGGVFSLN---CAF 253 (306)
Q Consensus 179 g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~-~~~-ipvia~GGI~s~~~~~~~l~~~---v~v 253 (306)
.+ ..+|+++++.|++.|.--+.... .-.+..+.++++++++ ..+ +|||+-|||.+++|+..+++.| |.+
T Consensus 133 -~D----~~~ak~l~~~G~~aVmPlg~pIG-sG~Gi~~~~~L~~i~~~~~~~vPVI~~GGI~tpsDAa~AmeLGAdgVlV 206 (268)
T 2htm_A 133 -PD----LVLAKRLAALGTATVMPLAAPIG-SGWGVRTRALLELFAREKASLPPVVVDAGLGLPSHAAEVMELGLDAVLV 206 (268)
T ss_dssp -SC----HHHHHHHHHHTCSCBEEBSSSTT-TCCCSTTHHHHHHHHHTTTTSSCBEEESCCCSHHHHHHHHHTTCCEEEE
T ss_pred -CC----HHHHHHHHhcCCCEEEecCccCc-CCcccCCHHHHHHHHHhcCCCCeEEEeCCCCCHHHHHHHHHcCCCEEEE
Confidence 33 38899999999999943232221 1223346678999998 568 9999999999999999999985 599
Q ss_pred ccccCC--CC
Q psy4398 254 LRNHYP--VE 261 (306)
Q Consensus 254 Grall~--~p 261 (306)
|+++.. ||
T Consensus 207 gSAI~~a~dP 216 (268)
T 2htm_A 207 NTAIAEAQDP 216 (268)
T ss_dssp SHHHHTSSSH
T ss_pred ChHHhCCCCH
Confidence 999875 45
No 123
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=98.51 E-value=7e-06 Score=77.23 Aligned_cols=158 Identities=14% Similarity=0.071 Sum_probs=121.3
Q ss_pred CCceEEEec---CCCHHHHHHHH-HHH-hcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEE
Q psy4398 101 KNKIILQIG---TADPERALEAA-KKV-EHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVS 173 (306)
Q Consensus 101 ~~p~ivql~---g~~~~~~~~aa-~~~-~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~ 173 (306)
..|+...+. ..+++++.+.+ +.+ ++||..+-+++|++.+. ...+++.-.+.++++|+.+ ++++.
T Consensus 125 ~v~~y~s~~g~~~~~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~---------~~~~~~~d~~~v~avR~a~g~~~~l~ 195 (393)
T 4dwd_A 125 RLPCYSSIGGNAARSVDEVVREVARRVEAEQPAAVKIRWDGDRTR---------CDVDIPGDIAKARAVRELLGPDAVIG 195 (393)
T ss_dssp EEEEEEEECCCSSSCHHHHHHHHHHHHHHHCCSEEEEECCCCTTC---------CSCCHHHHHHHHHHHHHHHCTTCCEE
T ss_pred ceeeEEecCccCCCCHHHHHHHHHHHHHHcCCCEEEEccCCCCcc---------cccCHHHHHHHHHHHHHHhCCCCeEE
Confidence 456777763 36788888877 655 45999999999986531 2346778888999999987 57899
Q ss_pred EEeccCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhhhh
Q psy4398 174 CKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNCAF 253 (306)
Q Consensus 174 vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v~v 253 (306)
+....+|+.+++.++++.|++.|+++|- ++. .+.+++..+++++.+++||++...+.+.++++++++.++
T Consensus 196 vDaN~~~~~~~A~~~~~~L~~~~i~~iE-------qP~-~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~-- 265 (393)
T 4dwd_A 196 FDANNGYSVGGAIRVGRALEDLGYSWFE-------EPV-QHYHVGAMGEVAQRLDITVSAGEQTYTLQALKDLILSGV-- 265 (393)
T ss_dssp EECTTCCCHHHHHHHHHHHHHTTCSEEE-------CCS-CTTCHHHHHHHHHHCSSEEEBCTTCCSHHHHHHHHHHTC--
T ss_pred EECCCCCCHHHHHHHHHHHHhhCCCEEE-------CCC-CcccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCC--
Confidence 9988899999999999999999999885 222 345889999999999999999999999999999887541
Q ss_pred ccccCCCC-CchH----HHHHHHHHhcCCC
Q psy4398 254 LRNHYPVE-KLPK----TILYAHCKYKRFE 278 (306)
Q Consensus 254 Grall~~p-~~~~----~~l~~~~~~~g~~ 278 (306)
..+.-++ .+.- +.+.+..+++|++
T Consensus 266 -d~v~~k~~~~GGit~~~~ia~~A~~~gi~ 294 (393)
T 4dwd_A 266 -RMVQPDIVKMGGITGMMQCAALAHAHGVE 294 (393)
T ss_dssp -CEECCCTTTTTHHHHHHHHHHHHHHHTCE
T ss_pred -CEEEeCccccCCHHHHHHHHHHHHHcCCE
Confidence 2222233 2211 2667778888887
No 124
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=98.51 E-value=1.3e-06 Score=82.43 Aligned_cols=168 Identities=9% Similarity=0.022 Sum_probs=119.3
Q ss_pred CCceEEEecCCCHHHHHHHHHHHh-cCCCEEEEccCCCccccc------cCCcccccc--CChHHHHHHHHHHHhcc--c
Q psy4398 101 KNKIILQIGTADPERALEAAKKVE-HDVAAIDINMGCPKQFSL------TGGMGAALL--STPDIACNILTTLISNL--S 169 (306)
Q Consensus 101 ~~p~ivql~g~~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~------~~~~G~~l~--~~~~~~~eiv~~v~~~~--~ 169 (306)
..|+...+.+.+++++.+.++.+. +||..+-+.+|++..... ...-|..+. +.++...++++++|+++ +
T Consensus 122 ~v~~y~~~~~~~~e~~~~~a~~~~~~G~~~~K~KvG~~~~~~~~~~~~~~~~~g~~~~~~~~~~~d~~~v~avR~a~G~d 201 (401)
T 3sbf_A 122 AIPVYTHATSDTMEGIYDLVEGFLEKGYKHIRCQLGFYGGVPTDLHTTQNPTEGSYYDQDQYMDNTLTMFKSLREKYGNQ 201 (401)
T ss_dssp SEEEEEEEEESSHHHHHHHHHHHHHTTCCEEEEEESCCCSCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHTTS
T ss_pred eeeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccccccccchHHHHHHHHHHHHHHHHcCCC
Confidence 456666777889999988887664 699999999987531100 001121111 12567788899999988 5
Q ss_pred ccEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHh
Q psy4398 170 IPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSL 249 (306)
Q Consensus 170 ~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~ 249 (306)
+++.+....+|+.+++.++++.+++.|+++|. ++. .+.+++..+++++.+++||++.+.+.+.++++++++.
T Consensus 202 ~~l~vDan~~~~~~~A~~~~~~L~~~~i~~iE-------qP~-~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~ 273 (401)
T 3sbf_A 202 FHILHDVHERLFPNQAIQFAKEVEQYKPYFIE-------DIL-PPNQTEWLDNIRSQSSVSLGLGELFNNPEEWKSLIAN 273 (401)
T ss_dssp SEEEEECTTCSCHHHHHHHHHHHGGGCCSCEE-------CSS-CTTCGGGHHHHHTTCCCCEEECTTCCSHHHHHHHHHT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHhcCCCEEE-------CCC-ChhHHHHHHHHHhhCCCCEEeCCccCCHHHHHHHHhc
Confidence 78999988899999999999999999998885 222 2457888999999999999999999999999999875
Q ss_pred hhhhccccCCCC-C----chHHHHHHHHHhcCCC
Q psy4398 250 NCAFLRNHYPVE-K----LPKTILYAHCKYKRFE 278 (306)
Q Consensus 250 ~v~vGrall~~p-~----~~~~~l~~~~~~~g~~ 278 (306)
+. ...+.-++ . ..-+.+.+..+++|++
T Consensus 274 ~~--~d~v~~k~~~~GGit~~~kia~~A~~~gi~ 305 (401)
T 3sbf_A 274 RR--IDFIRCHVSQIGGITPALKLGHLCQNFGVR 305 (401)
T ss_dssp TC--CSEECCCGGGGTSHHHHHHHHHHHHHHTCE
T ss_pred CC--CCEEecCccccCCHHHHHHHHHHHHHcCCE
Confidence 32 00011111 1 1112566777777876
No 125
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=98.51 E-value=8.3e-07 Score=83.01 Aligned_cols=144 Identities=12% Similarity=0.166 Sum_probs=111.0
Q ss_pred HHHHHHHHHHHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEeccCCC-hHHHHHH
Q psy4398 113 PERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIRVFHN-EADTIAL 188 (306)
Q Consensus 113 ~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~-~~~~~~~ 188 (306)
++++++.++.+. +||+.|.|++|++. .+++.-.+.++++|+++ +.++.+....+|+ .+++.++
T Consensus 147 ~e~~~~~a~~~~~~Gf~~iKlk~g~~g-------------~~~~~d~~~v~avR~a~g~~~~l~vDan~~~~d~~~A~~~ 213 (374)
T 3sjn_A 147 PEDNVAIVQGLKDQGFSSIKFGGGVMG-------------DDPDTDYAIVKAVREAAGPEMEVQIDLASKWHTCGHSAMM 213 (374)
T ss_dssp GGGGHHHHHHHHTTTCSEEEEECTTTT-------------SCHHHHHHHHHHHHHHHCSSSEEEEECTTTTCSHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEeccCCCC-------------CCHHHHHHHHHHHHHHhCCCCeEEEECCCCCCCHHHHHHH
Confidence 488888888765 59999999998742 24778888999999987 5788898888899 9999999
Q ss_pred HHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhhhhccccCCCC-Cc----
Q psy4398 189 CKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNCAFLRNHYPVE-KL---- 263 (306)
Q Consensus 189 a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v~vGrall~~p-~~---- 263 (306)
++.+++.|+++|- ++ ..+.+++..+++++.+++||++.+.+.+.++++++++.+. ...+.-++ .+
T Consensus 214 ~~~l~~~~i~~iE-------qP-~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~--~d~v~~k~~~~GGit 283 (374)
T 3sjn_A 214 AKRLEEFNLNWIE-------EP-VLADSLISYEKLSRQVSQKIAGGESLTTRYEFQEFITKSN--ADIVQPDITRCGGIT 283 (374)
T ss_dssp HHHSGGGCCSEEE-------CS-SCTTCHHHHHHHHHHCSSEEEECTTCCHHHHHHHHHHHHC--CSEECCBTTTSSHHH
T ss_pred HHHhhhcCceEEE-------CC-CCcccHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCC--CCEEEeCccccCCHH
Confidence 9999999999885 22 2245889999999999999999999999999999987532 00111122 12
Q ss_pred hHHHHHHHHHhcCCCC
Q psy4398 264 PKTILYAHCKYKRFEV 279 (306)
Q Consensus 264 ~~~~l~~~~~~~g~~~ 279 (306)
.-+.+.++.+++|++.
T Consensus 284 ~~~~ia~~A~~~gi~~ 299 (374)
T 3sjn_A 284 EMKKIYDIAQMNGTQL 299 (374)
T ss_dssp HHHHHHHHHHHHTCEE
T ss_pred HHHHHHHHHHHcCCEE
Confidence 1126677788888873
No 126
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=98.49 E-value=2.4e-06 Score=80.68 Aligned_cols=156 Identities=13% Similarity=0.077 Sum_probs=114.3
Q ss_pred CCHHHHHHHHHHHh-cCCCEEEEccCCCccccccCCcccc-ccCChHHHHHHHHHHHhcc--cccEEEEeccCCChHHHH
Q psy4398 111 ADPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAA-LLSTPDIACNILTTLISNL--SIPVSCKIRVFHNEADTI 186 (306)
Q Consensus 111 ~~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~-l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~ 186 (306)
.+++++++.++.+. +||..+-++.++|.. ...|.. ...+++...++++++|+++ ++++.+....+|+.+++.
T Consensus 150 ~~~e~~~~~a~~~~~~G~~~~KlK~g~~~~----~~~g~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDan~~~~~~~A~ 225 (404)
T 4e5t_A 150 NDADMAAEAAAKAVDQGFTAVKFDPAGAYT----IYDGHQPSLEDLERSEAFCKQIRAAVGTKADLLFGTHGQFTVSGAK 225 (404)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEECCSCCCB----TTCSBCCCHHHHHHHHHHHHHHHHHHGGGSEEEECCCSCBCHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEeeCCCCCCc----ccccccccHHHHHHHHHHHHHHHHHcCCCCeEEEeCCCCcCHHHHH
Confidence 47888888777654 599999999998742 111111 1123566788999999988 478888888889999999
Q ss_pred HHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhhhhccccCCCC-Cc--
Q psy4398 187 ALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNCAFLRNHYPVE-KL-- 263 (306)
Q Consensus 187 ~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v~vGrall~~p-~~-- 263 (306)
++++.+++.|+++|. ++ ..+.+++..+++++.+++||++.+.+.+.++++++++.+. ...+.-++ .+
T Consensus 226 ~~~~~l~~~~i~~iE-------eP-~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a--~d~v~~d~~~~GG 295 (404)
T 4e5t_A 226 RLARRLEAYDPLWFE-------EP-IPPEKPEDMAEVARYTSIPVATGERLCTKYEFSRVLETGA--ASILQMNLGRVGG 295 (404)
T ss_dssp HHHHHHGGGCCSEEE-------CC-SCTTCHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHHHTC--CSEECCCTTTSSC
T ss_pred HHHHHHhhcCCcEEE-------CC-CCcccHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCC--CCEEecCccccCC
Confidence 999999999999985 22 2345889999999999999999999999999999988532 00111122 11
Q ss_pred --hHHHHHHHHHhcCCCCC
Q psy4398 264 --PKTILYAHCKYKRFEVP 280 (306)
Q Consensus 264 --~~~~l~~~~~~~g~~~~ 280 (306)
.-+.+.+..+++|++..
T Consensus 296 it~~~~ia~~A~~~gi~~~ 314 (404)
T 4e5t_A 296 LLEAKKIAAMAECHSAQIA 314 (404)
T ss_dssp HHHHHHHHHHHHHTTCEEC
T ss_pred HHHHHHHHHHHHHcCCEEe
Confidence 12366777888888743
No 127
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=98.49 E-value=4.5e-06 Score=77.05 Aligned_cols=148 Identities=12% Similarity=0.143 Sum_probs=109.2
Q ss_pred CceEEEecCCCHHHHHHHHHHHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhccc--ccEEEEecc
Q psy4398 102 NKIILQIGTADPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLS--IPVSCKIRV 178 (306)
Q Consensus 102 ~p~ivql~g~~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~--~pv~vKir~ 178 (306)
.|+-..++..+++++.+.++++. +||+.|.+++++ +++.-.++++++|+. + +++.+....
T Consensus 129 v~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g~----------------~~~~d~~~v~avr~~-g~~~~l~vDan~ 191 (345)
T 2zad_A 129 IETDKTVGIDTVENRVKEAKKIFEEGFRVIKIKVGE----------------NLKEDIEAVEEIAKV-TRGAKYIVDANM 191 (345)
T ss_dssp EEBCEEECSCCHHHHHHHHHHHHHTTCSEEEEECCS----------------CHHHHHHHHHHHHHH-STTCEEEEECTT
T ss_pred eeeeEEecCCCHHHHHHHHHHHHHcCcCEEEEeecC----------------CHHHHHHHHHHHHhh-CCCCeEEEECCC
Confidence 34445566678999988888765 599999998764 355567788999887 4 456665555
Q ss_pred CCChHHHHHHHHHHHHcCCc--EEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhh----h
Q psy4398 179 FHNEADTIALCKRLEACGII--AIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNC----A 252 (306)
Q Consensus 179 g~~~~~~~~~a~~l~~~G~d--~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v----~ 252 (306)
+|+.+++.++++.+++.|++ .|- ++. .+.+++..+++++.+++||++.+.+.+.++++++++.+. +
T Consensus 192 ~~~~~~a~~~~~~l~~~~i~~~~iE-------~P~-~~~~~~~~~~l~~~~~ipia~dE~~~~~~~~~~~i~~~~~d~v~ 263 (345)
T 2zad_A 192 GYTQKEAVEFARAVYQKGIDIAVYE-------QPV-RREDIEGLKFVRFHSPFPVAADESARTKFDVMRLVKEEAVDYVN 263 (345)
T ss_dssp CSCHHHHHHHHHHHHHTTCCCSEEE-------CCS-CTTCHHHHHHHHHHSSSCEEESTTCCSHHHHHHHHHHTCCSEEE
T ss_pred CCCHHHHHHHHHHHHhcCCCeeeee-------CCC-CcccHHHHHHHHHhCCCCEEEeCCcCCHHHHHHHHHhCCCCEEE
Confidence 78999999999999999999 764 222 346899999999999999999999999999999987532 1
Q ss_pred h--ccccCCCCCchHHHHHHHHHhcCCC
Q psy4398 253 F--LRNHYPVEKLPKTILYAHCKYKRFE 278 (306)
Q Consensus 253 v--Grall~~p~~~~~~l~~~~~~~g~~ 278 (306)
+ +++-+ ..-+.+.++.+++|++
T Consensus 264 ik~~~GGi----t~~~~i~~~A~~~g~~ 287 (345)
T 2zad_A 264 IKLMKSGI----SDALAIVEIAESSGLK 287 (345)
T ss_dssp ECHHHHHH----HHHHHHHHHHHTTTCE
T ss_pred EecccccH----HHHHHHHHHHHHcCCe
Confidence 1 11101 1112556667777776
No 128
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=98.49 E-value=3.5e-06 Score=76.12 Aligned_cols=130 Identities=22% Similarity=0.218 Sum_probs=85.1
Q ss_pred HHHHHHhc-CCCEEEE--ccCCCccccccCCccc-cccCChHHHHHHHHHHHhcccccEEEEeccCCChHHHHHHHHHHH
Q psy4398 118 EAAKKVEH-DVAAIDI--NMGCPKQFSLTGGMGA-ALLSTPDIACNILTTLISNLSIPVSCKIRVFHNEADTIALCKRLE 193 (306)
Q Consensus 118 ~aa~~~~~-g~d~vel--n~gcP~~~~~~~~~G~-~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~a~~l~ 193 (306)
+.|+..++ |++.|.+ |.+|+.. .+|+ ....+++ .++++++.+.+||.+|.+.+. .+.++.++
T Consensus 32 e~A~~ye~~GA~~lsvLe~~~~Di~-----~~~g~~R~~~~~----~i~~i~~~v~iPvl~k~~i~~-----ide~qil~ 97 (297)
T 4adt_A 32 EQAKIAEKAGAIGVMILENIPSELR-----NTDGVARSVDPL----KIEEIRKCISINVLAKVRIGH-----FVEAQILE 97 (297)
T ss_dssp HHHHHHHHHTCSEEEECCCCC----------CCCCCCCCCHH----HHHHHHTTCCSEEEEEEETTC-----HHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEecCCCCcch-----hcCCcccCCCHH----HHHHHHHhcCCCEEEeccCCc-----HHHHHHHH
Confidence 44555554 9998765 4556542 2333 3444555 466678888999999987432 55666667
Q ss_pred HcCCcEEEEccc-CC---------------------------------------CCC-CCC-------------------
Q psy4398 194 ACGIIAIGVHGR-TK---------------------------------------AER-PRH------------------- 213 (306)
Q Consensus 194 ~~G~d~i~v~~~-~~---------------------------------------~~~-~~~------------------- 213 (306)
++|+|.|..+.. +. .+. +.+
T Consensus 98 aaGAD~Id~s~~~~~~~li~~i~~~~~g~~vvv~v~~~~Ea~~a~~~Gad~I~v~g~~gTG~~~~~v~h~~~~~~eir~l 177 (297)
T 4adt_A 98 ELKVDMLDESEVLTMADEYNHINKHKFKTPFVCGCTNLGEALRRISEGASMIRTKGEAGTGNIIEAIKHIRTVNNEIKYL 177 (297)
T ss_dssp HTTCSEEEEETTSCCSCSSCCCCGGGCSSCEEEEESSHHHHHHHHHHTCSEEEECCCTTSCCCHHHHHHHHHHHHHHHHH
T ss_pred HcCCCEEEcCCCCCHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhCCCCEEEECCCcCCCchHHHHHHHHHhhhhhhhh
Confidence 788888743211 00 000 011
Q ss_pred ---------------CCcHHHHHHHHhhCCCcEE--EecCCCCHHHHHHHHHhh---hhhccccCCCC
Q psy4398 214 ---------------RNRIEMIRTLTQHLKIPVI--ANGGSKEIVDYGGVFSLN---CAFLRNHYPVE 261 (306)
Q Consensus 214 ---------------p~~~~~v~~i~~~~~ipvi--a~GGI~s~~~~~~~l~~~---v~vGrall~~p 261 (306)
..++++++++++.+++||+ +.|||.+++++..+++.| +.+|++++..+
T Consensus 178 ~~~~~d~L~t~~~~~~~~~~ll~~i~~~~~iPVivvA~GGI~t~~dv~~~~~~GAdgVlVGsai~~a~ 245 (297)
T 4adt_A 178 CSLDESEVYNFAKKLRAPIDLILLTRKLKRLPVVNFAAGGIATPADAAMCMQLGMDGVFVGSGIFESE 245 (297)
T ss_dssp HHSCTTTHHHHHHHHTCCHHHHHHHHHHTSCSSEEEEESCCCSHHHHHHHHHTTCSCEEESHHHHTSS
T ss_pred ccccccccccccccCCCCHHHHHHHHHhcCCCeEEEecCCCCCHHHHHHHHHcCCCEEEEhHHHHcCC
Confidence 2457888999999889987 999999999999999875 49999999743
No 129
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=98.47 E-value=1.8e-06 Score=77.10 Aligned_cols=151 Identities=15% Similarity=0.163 Sum_probs=102.1
Q ss_pred ceEEEecCCCH--HHHHHHHHHHhc-CCCEEEEccCCCccccccCCcccccc----------CChHHHHHHHHHHHhc-c
Q psy4398 103 KIILQIGTADP--ERALEAAKKVEH-DVAAIDINMGCPKQFSLTGGMGAALL----------STPDIACNILTTLISN-L 168 (306)
Q Consensus 103 p~ivql~g~~~--~~~~~aa~~~~~-g~d~veln~gcP~~~~~~~~~G~~l~----------~~~~~~~eiv~~v~~~-~ 168 (306)
.++..|...+| +.+.+.++.+++ |+|.||+++....+ ..| |.... -+.....++++++|+. +
T Consensus 18 ~~i~~i~~gdp~~~~~~~~~~~l~~~GaD~ieig~P~sdp--~~D--G~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~ 93 (268)
T 1qop_A 18 AFVPFVTLGDPGIEQSLKIIDTLIDAGADALELGVPFSDP--LAD--GPTIQNANLRAFAAGVTPAQCFEMLAIIREKHP 93 (268)
T ss_dssp EEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCC--TTC--CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCS
T ss_pred eEEEEeeCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCc--cCC--CHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCC
Confidence 46667766655 888888887765 99999997532111 111 11111 1456677899999988 7
Q ss_pred cccEEEEeccCCCh---HHHHHHHHHHHHcCCcEEEEcccCC-------------------------------------C
Q psy4398 169 SIPVSCKIRVFHNE---ADTIALCKRLEACGIIAIGVHGRTK-------------------------------------A 208 (306)
Q Consensus 169 ~~pv~vKir~g~~~---~~~~~~a~~l~~~G~d~i~v~~~~~-------------------------------------~ 208 (306)
+.|+.+=.. +++ ....++++.+.++|+|++++++-.. .
T Consensus 94 ~~Pv~lm~y--~n~v~~~g~~~~~~~~~~aGadgii~~d~~~e~~~~~~~~~~~~g~~~i~l~~p~t~~~~i~~i~~~~~ 171 (268)
T 1qop_A 94 TIPIGLLMY--ANLVFNNGIDAFYARCEQVGVDSVLVADVPVEESAPFRQAALRHNIAPIFICPPNADDDLLRQVASYGR 171 (268)
T ss_dssp SSCEEEEEC--HHHHHTTCHHHHHHHHHHHTCCEEEETTCCGGGCHHHHHHHHHTTCEEECEECTTCCHHHHHHHHHHCC
T ss_pred CCCEEEEEc--ccHHHHhhHHHHHHHHHHcCCCEEEEcCCCHHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHhhCC
Confidence 899766221 121 1136788888888999888754220 0
Q ss_pred C--------CCCC------CCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHh---hhhhccccCC
Q psy4398 209 E--------RPRH------RNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSL---NCAFLRNHYP 259 (306)
Q Consensus 209 ~--------~~~~------p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~---~v~vGrall~ 259 (306)
+ .+.+ +...++++++++.+++||+..|||++++++.+++.. ++.+|++++.
T Consensus 172 g~v~~~s~~G~tG~~~~~~~~~~~~i~~lr~~~~~pi~vggGI~t~e~~~~~~~agAD~vVVGSai~~ 239 (268)
T 1qop_A 172 GYTYLLSRSGVTGAENRGALPLHHLIEKLKEYHAAPALQGFGISSPEQVSAAVRAGAAGAISGSAIVK 239 (268)
T ss_dssp SCEEEESSSSCCCSSSCC--CCHHHHHHHHHTTCCCEEEESSCCSHHHHHHHHHTTCSEEEECHHHHH
T ss_pred CcEEEEecCCcCCCccCCCchHHHHHHHHHhccCCcEEEECCCCCHHHHHHHHHcCCCEEEEChHHhh
Confidence 0 0111 223689999999999999999999999999997765 5599999864
No 130
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=98.47 E-value=8.6e-07 Score=79.03 Aligned_cols=150 Identities=12% Similarity=0.145 Sum_probs=104.3
Q ss_pred CceEEEecCCCH--HHHHHHHHHHhc-CCCEEEEccC--CCccccccCCcccccc----------CChHHHHHHHHHHHh
Q psy4398 102 NKIILQIGTADP--ERALEAAKKVEH-DVAAIDINMG--CPKQFSLTGGMGAALL----------STPDIACNILTTLIS 166 (306)
Q Consensus 102 ~p~ivql~g~~~--~~~~~aa~~~~~-g~d~veln~g--cP~~~~~~~~~G~~l~----------~~~~~~~eiv~~v~~ 166 (306)
..++.-|...+| +.+.+.++.+++ |+|.|||.+. -|. .| |-.+. -+.+.+.++++++|+
T Consensus 18 ~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElgiPfSDP~----aD--Gp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~ 91 (267)
T 3vnd_A 18 GAFVPFVTIGDPSPELSLKIIQTLVDNGADALELGFPFSDPL----AD--GPVIQGANLRSLAAGTTSSDCFDIITKVRA 91 (267)
T ss_dssp CEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCT----TC--CHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCC----CC--CHHHHHHHHHHHHcCCCHHHHHHHHHHHHh
Confidence 356777766655 889999988765 9999999743 343 11 11111 245677899999998
Q ss_pred c-ccccEEEEeccCCChH---HHHHHHHHHHHcCCcEEEEcccCC-----------------------------------
Q psy4398 167 N-LSIPVSCKIRVFHNEA---DTIALCKRLEACGIIAIGVHGRTK----------------------------------- 207 (306)
Q Consensus 167 ~-~~~pv~vKir~g~~~~---~~~~~a~~l~~~G~d~i~v~~~~~----------------------------------- 207 (306)
. .++|+.+-.- +++- ...++++.+.++|+|++++++-..
T Consensus 92 ~~~~~Pivlm~Y--~npv~~~g~e~f~~~~~~aGvdgvii~Dlp~ee~~~~~~~~~~~gl~~i~liaP~t~~eri~~i~~ 169 (267)
T 3vnd_A 92 QHPDMPIGLLLY--ANLVFANGIDEFYTKAQAAGVDSVLIADVPVEESAPFSKAAKAHGIAPIFIAPPNADADTLKMVSE 169 (267)
T ss_dssp HCTTCCEEEEEC--HHHHHHHCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEECEECTTCCHHHHHHHHH
T ss_pred cCCCCCEEEEec--CcHHHHhhHHHHHHHHHHcCCCEEEeCCCCHhhHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHH
Confidence 7 7889877544 2321 247788899999999988754210
Q ss_pred --CC--------CCC------CCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHh---hhhhccccCC
Q psy4398 208 --AE--------RPR------HRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSL---NCAFLRNHYP 259 (306)
Q Consensus 208 --~~--------~~~------~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~---~v~vGrall~ 259 (306)
.+ ... .+...+.++++++.+++||+..|||++++++++.++. ++.+|+++++
T Consensus 170 ~~~gfvY~vS~~GvTG~~~~~~~~~~~~v~~vr~~~~~pv~vGfGI~~~e~~~~~~~~gADgvVVGSaiv~ 240 (267)
T 3vnd_A 170 QGEGYTYLLSRAGVTGTESKAGEPIENILTQLAEFNAPPPLLGFGIAEPEQVRAAIKAGAAGAISGSAVVK 240 (267)
T ss_dssp HCCSCEEESCCCCCC--------CHHHHHHHHHTTTCCCEEECSSCCSHHHHHHHHHTTCSEEEECHHHHH
T ss_pred hCCCcEEEEecCCCCCCccCCcHHHHHHHHHHHHhcCCCEEEECCcCCHHHHHHHHHcCCCEEEECHHHHH
Confidence 00 000 1123578899999999999999999999999966664 5699998864
No 131
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=98.46 E-value=1.4e-06 Score=82.65 Aligned_cols=165 Identities=12% Similarity=0.043 Sum_probs=119.5
Q ss_pred CCceEEEecCCCHHHHHHHHHHHh-cCCCEEEEccCCCccccccCCccc--------------------cccCChHHHHH
Q psy4398 101 KNKIILQIGTADPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGA--------------------ALLSTPDIACN 159 (306)
Q Consensus 101 ~~p~ivql~g~~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~--------------------~l~~~~~~~~e 159 (306)
..|+...+.+.+++++++.++.+. +||..+-+++|+|.... .||. ...++++...+
T Consensus 132 ~v~~y~~~~~~~~e~~~~~a~~~~~~Gf~~~K~k~G~~~~~~---~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~d~~ 208 (418)
T 3r4e_A 132 GIMVYGHANGSDIAETVEAVGHYIDMGYKAIRAQTGVPGIKD---AYGVGRGKLYYEPADASLPSVTGWDTRKALNYVPK 208 (418)
T ss_dssp SEEEEEEEEESSHHHHHHHHHHHHHTTCSEEEEEECCTTC---------------------CCCCEEEECHHHHHHHHHH
T ss_pred eeeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEecCCccccc---cccccccccccccccccccccccccchhHHHHHHH
Confidence 356666677889999988887664 69999999999875211 1111 01112566788
Q ss_pred HHHHHHhcc--cccEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCC
Q psy4398 160 ILTTLISNL--SIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGS 237 (306)
Q Consensus 160 iv~~v~~~~--~~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI 237 (306)
+++++|+++ ++++.+....+|+.+++.++++.|++.|+++|. ++. .+.+++..+++++.+++||++.+.+
T Consensus 209 ~v~avR~a~G~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iE-------qP~-~~~d~~~~~~l~~~~~iPIa~dE~~ 280 (418)
T 3r4e_A 209 LFEELRKTYGFDHHLLHDGHHRYTPQEAANLGKMLEPYQLFWLE-------DCT-PAENQEAFRLVRQHTVTPLAVGEIF 280 (418)
T ss_dssp HHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHGGGCCSEEE-------SCS-CCSSGGGGHHHHHHCCSCEEECTTC
T ss_pred HHHHHHHHcCCCCeEEEeCCCCCCHHHHHHHHHHHHhhCCCEEE-------CCC-CccCHHHHHHHHhcCCCCEEEcCCc
Confidence 999999988 578888888899999999999999999999985 222 2457888899999999999999999
Q ss_pred CCHHHHHHHHHhhhhhccccCCCC-Cc----hHHHHHHHHHhcCCC
Q psy4398 238 KEIVDYGGVFSLNCAFLRNHYPVE-KL----PKTILYAHCKYKRFE 278 (306)
Q Consensus 238 ~s~~~~~~~l~~~v~vGrall~~p-~~----~~~~l~~~~~~~g~~ 278 (306)
.+.++++++++.+. ...+.-++ .+ .-+.+.+..+++|++
T Consensus 281 ~~~~~~~~~l~~~a--~d~v~~k~~~~GGit~~~~ia~~A~~~gi~ 324 (418)
T 3r4e_A 281 NTIWDAKDLIQNQL--IDYIRATVVGAGGLTHLRRIADLASLYQVR 324 (418)
T ss_dssp CSGGGTHHHHHTTC--CSEECCCTTTTTHHHHHHHHHHHHHHTTCE
T ss_pred CCHHHHHHHHHcCC--CCeEecCccccCCHHHHHHHHHHHHHcCCE
Confidence 99999999988532 00111122 12 112667778888887
No 132
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=98.46 E-value=5.3e-06 Score=78.56 Aligned_cols=157 Identities=15% Similarity=0.110 Sum_probs=114.3
Q ss_pred CCHHHHHHHHHHHh-cCCCEEEEccCCCccccccCCccccc-cCChHHHHHHHHHHHhcc--cccEEEEeccCCChHHHH
Q psy4398 111 ADPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAAL-LSTPDIACNILTTLISNL--SIPVSCKIRVFHNEADTI 186 (306)
Q Consensus 111 ~~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l-~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~ 186 (306)
.+++++++.++.+. +||..+-++.++|... ..|... ..+++...+.++++|+++ ++++.+....+|+.+++.
T Consensus 143 ~~~e~~~~~a~~~~~~G~~~iKlK~g~~~~~----~~g~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDaN~~~~~~~A~ 218 (412)
T 4e4u_A 143 DDPDLAAECAAENVKLGFTAVKFDPAGPYTA----YSGHQLSLEVLDRCELFCRRVREAVGSKADLLFGTHGQMVPSSAI 218 (412)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEECCSCCCBT----TCCBCCCHHHHHHHHHHHHHHHHHHTTSSEEEECCCSCBCHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCCCCcc----ccccccchhhHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHH
Confidence 57889888777654 5999999999886431 111111 113566788999999988 478888888889999999
Q ss_pred HHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhhhhccccCCCC-Cc--
Q psy4398 187 ALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNCAFLRNHYPVE-KL-- 263 (306)
Q Consensus 187 ~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v~vGrall~~p-~~-- 263 (306)
++++.+++.|+++|. ++ ..+.+++..+++++.+++||++.+.+.+.++++++++.+. ...+.-++ .+
T Consensus 219 ~~~~~L~~~~i~~iE-------eP-~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a--~d~v~~d~~~~GG 288 (412)
T 4e4u_A 219 RLAKRLEKYDPLWFE-------EP-VPPGQEEAIAQVAKHTSIPIATGERLTTKYEFHKLLQAGG--ASILQLNVARVGG 288 (412)
T ss_dssp HHHHHHGGGCCSEEE-------CC-SCSSCHHHHHHHHHTCSSCEEECTTCCHHHHHHHHHHTTC--CSEECCCTTTTTS
T ss_pred HHHHHhhhcCCcEEE-------CC-CChhhHHHHHHHHhhCCCCEEecCccCCHHHHHHHHHcCC--CCEEEeCccccCC
Confidence 999999999999885 22 2345889999999999999999999999999999988532 00011122 11
Q ss_pred --hHHHHHHHHHhcCCCCCc
Q psy4398 264 --PKTILYAHCKYKRFEVPK 281 (306)
Q Consensus 264 --~~~~l~~~~~~~g~~~~~ 281 (306)
.-+.+.+..+++|+++.+
T Consensus 289 it~~~kia~~A~~~gi~v~~ 308 (412)
T 4e4u_A 289 LLEAKKIATLAEVHYAQIAP 308 (412)
T ss_dssp HHHHHHHHHHHHHTTCEECC
T ss_pred HHHHHHHHHHHHHcCCEEEe
Confidence 123667778888887433
No 133
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=98.43 E-value=9.5e-07 Score=75.90 Aligned_cols=156 Identities=16% Similarity=0.183 Sum_probs=100.8
Q ss_pred CceEEEecCCCHHHHHHHHHHHhc-CCCEEEEccCCCcccc---------ccCCccccc---------------cCChHH
Q psy4398 102 NKIILQIGTADPERALEAAKKVEH-DVAAIDINMGCPKQFS---------LTGGMGAAL---------------LSTPDI 156 (306)
Q Consensus 102 ~p~ivql~g~~~~~~~~aa~~~~~-g~d~veln~gcP~~~~---------~~~~~G~~l---------------~~~~~~ 156 (306)
.|++..+.+.+++++.+.++.+.+ |++.||+.+.+|+... ...++|.-+ .--+..
T Consensus 13 ~~ii~vi~~~~~~~~~~~~~~l~~gGv~~iel~~k~~~~~~~i~~~~~~~~~~gag~vl~~d~~~~A~~~GAd~v~~~~~ 92 (207)
T 2yw3_A 13 SRLLPLLTVRGGEDLLGLARVLEEEGVGALEITLRTEKGLEALKALRKSGLLLGAGTVRSPKEAEAALEAGAAFLVSPGL 92 (207)
T ss_dssp HCEEEEECCCSCCCHHHHHHHHHHTTCCEEEEECSSTHHHHHHHHHTTSSCEEEEESCCSHHHHHHHHHHTCSEEEESSC
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHcCCCEEEEeCCChHHHHHHHHHhCCCCEEEeCeEeeHHHHHHHHHcCCCEEEcCCC
Confidence 478888888888888888887755 8999999988876421 112333311 111111
Q ss_pred HHHHHHHHHhcccccEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCC-cHHHHHHHHhhC-CCcEEEe
Q psy4398 157 ACNILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRN-RIEMIRTLTQHL-KIPVIAN 234 (306)
Q Consensus 157 ~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~-~~~~v~~i~~~~-~ipvia~ 234 (306)
-.++++..++ .+.|+...+. + .+-+..+.+.|+|+|.++.. .+. .+++++++++.+ ++|+++.
T Consensus 93 d~~v~~~~~~-~g~~~i~G~~---t----~~e~~~A~~~Gad~v~~fpa-------~~~gG~~~lk~l~~~~~~ipvvai 157 (207)
T 2yw3_A 93 LEEVAALAQA-RGVPYLPGVL---T----PTEVERALALGLSALKFFPA-------EPFQGVRVLRAYAEVFPEVRFLPT 157 (207)
T ss_dssp CHHHHHHHHH-HTCCEEEEEC---S----HHHHHHHHHTTCCEEEETTT-------TTTTHHHHHHHHHHHCTTCEEEEB
T ss_pred CHHHHHHHHH-hCCCEEecCC---C----HHHHHHHHHCCCCEEEEecC-------ccccCHHHHHHHHhhCCCCcEEEe
Confidence 1234444333 3555554433 2 22234456789999999641 122 468899999988 8999999
Q ss_pred cCCCCHHHHHHHHHhh---hhhccccCCCCCch--HHHHHHHHHh
Q psy4398 235 GGSKEIVDYGGVFSLN---CAFLRNHYPVEKLP--KTILYAHCKY 274 (306)
Q Consensus 235 GGI~s~~~~~~~l~~~---v~vGrall~~p~~~--~~~l~~~~~~ 274 (306)
|||+ .+++.++++.+ +++|++++. +.+. ....+++++.
T Consensus 158 GGI~-~~n~~~~l~aGa~~vavgSai~~-~d~~~i~~~a~~~~~~ 200 (207)
T 2yw3_A 158 GGIK-EEHLPHYAALPNLLAVGGSWLLQ-GNLEAVRAKVRAAKAL 200 (207)
T ss_dssp SSCC-GGGHHHHHTCSSBSCEEESGGGS-SCHHHHHHHHHHHHHH
T ss_pred CCCC-HHHHHHHHhCCCcEEEEehhhhC-CCHHHHHHHHHHHHHH
Confidence 9997 69999999874 489999987 4333 2344555544
No 134
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=98.42 E-value=3.6e-07 Score=103.81 Aligned_cols=198 Identities=11% Similarity=0.094 Sum_probs=122.8
Q ss_pred ccccccccCCceEEccCCC-CCCHHHHHHHHHcC-CCEEEe-cceechhhhhhhhhhhcccccccccCCCCCceeeecCC
Q psy4398 22 ANQANINYSNKIILAPMVR-MNTLPFRLLALDYG-ADLVYS-EELVDHKLVKTERKVNDLLNTIDFVDPLDGSVVFRTCP 98 (306)
Q Consensus 22 ~~~~~l~l~n~i~lAPm~~-~t~~~~r~~~~~~G-~g~~~t-e~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 98 (306)
++++.+.-+.||++|||.+ .++..+...+.++| .|.+-. .+.+++.+....+..... +
T Consensus 419 t~~~~~lg~~PIi~a~M~~~~s~~~LaaAVs~AGglG~l~~~g~~~~~~l~~~i~~~r~~------------------~- 479 (3089)
T 3zen_D 419 TKFTRLTGRSPILLAGMTPTTVDAKIVAAAANAGHWAELAGGGQVTEQIFNDRIAELETL------------------L- 479 (3089)
T ss_dssp CHHHHHHSSCSEEECCCHHHHTSHHHHHHHHHTTCEEEECSTTCCSHHHHHHHHHHHHHH------------------S-
T ss_pred chhhhhcCCCCEEeCCCcCCcCCHHHHHHHHhCCCceeecCCCCCCHHHHHHHHHHHHHh------------------c-
Confidence 3344433388999999995 45788887766665 466622 222333332221111110 1
Q ss_pred CCCCceEEEecCCCHHHH------HHHHHHH-hcC--CCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhccc
Q psy4398 99 REKNKIILQIGTADPERA------LEAAKKV-EHD--VAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLS 169 (306)
Q Consensus 99 ~~~~p~ivql~g~~~~~~------~~aa~~~-~~g--~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~ 169 (306)
..+.|+.+++.-.++..+ .+..+.+ ++| +|+|-+.+|.|. .+...++++.+++. +
T Consensus 480 ~~~~p~~vNl~~~~p~~~~~~~g~~~~~~~~~~~g~~vdgv~~~aG~P~---------------~ee~~~~i~~l~~~-G 543 (3089)
T 3zen_D 480 EPGRAIQFNTLFLDPYLWKLQVGGKRLVQRARQSGAPIDGLVVSAGIPD---------------LEEAVDIIDELNEV-G 543 (3089)
T ss_dssp CTTCCCEEEEECSCHHHHHHHHHHHHHHHHHHHTTCSCCEEEEESSCCC---------------HHHHHHHHTSTTHH-H
T ss_pred CCCCceeechhhcChhhhhhccCHHHHHHHHHHcCCCceEEEEeCCCCc---------------hhHhHHHHHHHHHc-C
Confidence 125688899887777442 2344444 458 899999888874 23445566666553 5
Q ss_pred ccEEE-EeccCCChHHHHHHHHHHHHcCCc------EEEEcccCCCCCCCCCCcHHHH----HHHHhhCCCcEEEecCCC
Q psy4398 170 IPVSC-KIRVFHNEADTIALCKRLEACGII------AIGVHGRTKAERPRHRNRIEMI----RTLTQHLKIPVIANGGSK 238 (306)
Q Consensus 170 ~pv~v-Kir~g~~~~~~~~~a~~l~~~G~d------~i~v~~~~~~~~~~~p~~~~~v----~~i~~~~~ipvia~GGI~ 238 (306)
+.++. +.. + .+.++.+++.|+| +|++.|.+..+.........++ .++++.+++|||+.|||.
T Consensus 544 i~~i~~~~~---t----~~~a~~~~~i~~d~~~~~y~vv~~G~eaGGH~g~~~~~~ll~~~~~~ir~~~~iPViaaGGI~ 616 (3089)
T 3zen_D 544 ISHVVFKPG---T----VEQIRSVIRIAAEVPTKPVIVHIEGGRAGGHHSWEDLDDLLLATYSELRSRSNITICVGGGIG 616 (3089)
T ss_dssp HCSEEECCC---S----HHHHHHHHHHHTTSTTSCEEEEECCSSSSEECCSCCHHHHHHHHHHHHTTCTTEEEEEESSCC
T ss_pred CEEEEEeCC---C----HHHHHHHHHhhhhcCCCcEEEEEeCCCcCCCCCcccHHHHHHHHHHHHhhcCCCeEEEEeCCC
Confidence 54444 555 2 3444555566666 7888876543322111223455 788888899999999999
Q ss_pred CHHHHHHHH-----------H---hhhhhccccCCCC
Q psy4398 239 EIVDYGGVF-----------S---LNCAFLRNHYPVE 261 (306)
Q Consensus 239 s~~~~~~~l-----------~---~~v~vGrall~~p 261 (306)
|.+++..++ . .+++||++++.-+
T Consensus 617 d~~~vaaal~g~ws~~~~~p~lGAdGV~vGTrfl~t~ 653 (3089)
T 3zen_D 617 TPERSAEYLSGRWAEVHGYPLMPIDGILVGTAAMATL 653 (3089)
T ss_dssp CTTTTHHHHHTGGGGTTTCCCCCCSEEECSSTTTTCT
T ss_pred CHHHHHHHhccccccccCccCCCCCEEEecHHHHhCc
Confidence 999999999 3 3679999998755
No 135
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=98.42 E-value=2.4e-06 Score=81.20 Aligned_cols=168 Identities=10% Similarity=0.021 Sum_probs=118.3
Q ss_pred CCceEEEecCCCHHHHHHHHHHHh-cCCCEEEEccCCCcccc------ccCCcccccc--CChHHHHHHHHHHHhcc--c
Q psy4398 101 KNKIILQIGTADPERALEAAKKVE-HDVAAIDINMGCPKQFS------LTGGMGAALL--STPDIACNILTTLISNL--S 169 (306)
Q Consensus 101 ~~p~ivql~g~~~~~~~~aa~~~~-~g~d~veln~gcP~~~~------~~~~~G~~l~--~~~~~~~eiv~~v~~~~--~ 169 (306)
..|+...+.+.+++++.+.++.+. +||..|-+.+|++.... ....-|..+. +..+...++++++|+++ +
T Consensus 143 ~v~~y~~~~~~~~e~~~~~a~~~~~~G~~~iKlKvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~e~v~avR~avG~d 222 (422)
T 3tji_A 143 AIPAYSHASGETLEALFASVDALIAQGYRHIRCQLGFYGGTPSALHAPDNPTPGAWFDQQEYMSNTVEMFHALREKYGWK 222 (422)
T ss_dssp CEEEEEEEEESSHHHHHHHHHHHHHTTCSEEEEEESCCCBCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHCSS
T ss_pred eEEEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccccccccchhHHHHHHHHHHHHHHHcCCC
Confidence 456666667788999988887664 69999999998642100 0001111111 12566788899999987 5
Q ss_pred ccEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHh
Q psy4398 170 IPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSL 249 (306)
Q Consensus 170 ~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~ 249 (306)
+++.+....+|+.+++.++++.|++.|+++|- ++. .+.+++..+++++.+++||++.+.+.+.++++++++.
T Consensus 223 ~~L~vDaN~~~~~~~A~~~~~~Le~~~i~~iE-------qP~-~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~ll~~ 294 (422)
T 3tji_A 223 LHILHDVHERLFPQQAVQLAKQLEPFQPYFIE-------DIL-PPQQSAWLEQVRQQSCVPLALGELFNNPAEWHDLIVN 294 (422)
T ss_dssp SEEEEECTTCSCHHHHHHHHHHHGGGCCSEEE-------CCS-CGGGGGGHHHHHHHCCCCEEECTTCCSGGGTHHHHHT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHhhCCCeEE-------CCC-ChhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHhc
Confidence 78888888899999999999999999999885 222 2457888899999999999999999999999999875
Q ss_pred hhhhccccCCCC-C----chHHHHHHHHHhcCCC
Q psy4398 250 NCAFLRNHYPVE-K----LPKTILYAHCKYKRFE 278 (306)
Q Consensus 250 ~v~vGrall~~p-~----~~~~~l~~~~~~~g~~ 278 (306)
+. ...+.-++ . ..-+.+.+..+++|++
T Consensus 295 ga--~d~v~~k~~~~GGit~~~kia~lA~a~gv~ 326 (422)
T 3tji_A 295 RR--IDFIRCHVSQIGGITPALKLAHLCQAFGVR 326 (422)
T ss_dssp TC--CSEECCCGGGGTSHHHHHHHHHHHHHTTCE
T ss_pred CC--CCEEecCccccCCHHHHHHHHHHHHHcCCE
Confidence 32 00011111 1 1122566777888877
No 136
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=98.40 E-value=5.7e-06 Score=70.87 Aligned_cols=133 Identities=17% Similarity=0.194 Sum_probs=86.5
Q ss_pred CCceEEEecCCCHHHHHHHHHHHhc-CCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEeccC
Q psy4398 101 KNKIILQIGTADPERALEAAKKVEH-DVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVF 179 (306)
Q Consensus 101 ~~p~ivql~g~~~~~~~~aa~~~~~-g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g 179 (306)
+.|++.+|.+.+++++.+.++.+.+ |++.|++...+|.. .+.++.+++..+.++.+....-
T Consensus 6 ~~~i~~~i~~~d~~~~~~~~~~~~~~G~~~i~l~~~~~~~------------------~~~i~~i~~~~~~~l~vg~g~~ 67 (212)
T 2v82_A 6 KLPLIAILRGITPDEALAHVGAVIDAGFDAVEIPLNSPQW------------------EQSIPAIVDAYGDKALIGAGTV 67 (212)
T ss_dssp SSCEEEECTTCCHHHHHHHHHHHHHHTCCEEEEETTSTTH------------------HHHHHHHHHHHTTTSEEEEECC
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHCCCCEEEEeCCChhH------------------HHHHHHHHHhCCCCeEEEeccc
Confidence 4689999999999999999988765 99999998776542 0122222222233333321100
Q ss_pred CC--------------------------------------hHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHH
Q psy4398 180 HN--------------------------------------EADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIR 221 (306)
Q Consensus 180 ~~--------------------------------------~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~ 221 (306)
.+ ..+..+ +....+.|+|+|.+... .+..++.++
T Consensus 68 ~~~~~i~~a~~~Gad~V~~~~~~~~~~~~~~~~g~~~~~g~~t~~e-~~~a~~~G~d~v~v~~t-------~~~g~~~~~ 139 (212)
T 2v82_A 68 LKPEQVDALARMGCQLIVTPNIHSEVIRRAVGYGMTVCPGCATATE-AFTALEAGAQALKIFPS-------SAFGPQYIK 139 (212)
T ss_dssp CSHHHHHHHHHTTCCEEECSSCCHHHHHHHHHTTCEEECEECSHHH-HHHHHHTTCSEEEETTH-------HHHCHHHHH
T ss_pred cCHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHcCCCEEeecCCHHH-HHHHHHCCCCEEEEecC-------CCCCHHHHH
Confidence 00 001112 23334567777765321 123568889
Q ss_pred HHHhhCC--CcEEEecCCCCHHHHHHHHHhhh---hhccccCCC
Q psy4398 222 TLTQHLK--IPVIANGGSKEIVDYGGVFSLNC---AFLRNHYPV 260 (306)
Q Consensus 222 ~i~~~~~--ipvia~GGI~s~~~~~~~l~~~v---~vGrall~~ 260 (306)
++++.++ +||++.|||+ .+++.++++.|+ .+|++++..
T Consensus 140 ~l~~~~~~~ipvia~GGI~-~~~i~~~~~~Ga~gv~vGsai~~~ 182 (212)
T 2v82_A 140 ALKAVLPSDIAVFAVGGVT-PENLAQWIDAGCAGAGLGSDLYRA 182 (212)
T ss_dssp HHHTTSCTTCEEEEESSCC-TTTHHHHHHHTCSEEEECTTTCCT
T ss_pred HHHHhccCCCeEEEeCCCC-HHHHHHHHHcCCCEEEEChHHhCC
Confidence 9998886 9999999997 899999988754 999999875
No 137
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=98.40 E-value=6.2e-06 Score=78.36 Aligned_cols=165 Identities=13% Similarity=0.126 Sum_probs=118.7
Q ss_pred CCceEEEecCCCHHHHHHHHHHHh-cCCCEEEEccCCCccccccCCcccc------------------c--cCChHHHHH
Q psy4398 101 KNKIILQIGTADPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAA------------------L--LSTPDIACN 159 (306)
Q Consensus 101 ~~p~ivql~g~~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~------------------l--~~~~~~~~e 159 (306)
..|+...+.+.+++++++.++.+. +||..+-+.+|.|.. ...||.. + .++.+...+
T Consensus 138 ~v~~y~~~~~~~~e~~~~~a~~~~~~Gf~~iKlKvG~~~~---~~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~e 214 (424)
T 3v3w_A 138 RILSYTHANGKDLDSTLEAVRKAKDKGYKAIRVQCGIPGI---AKTYGVSTNTKSYEPADADLPSVEVWSTEKYLNYIPD 214 (424)
T ss_dssp SEEEEEEEEESSHHHHHHHHHHHHHTTCSEEEEEECCTTC---SCCTTCC-----CCSCCBSSCCEEEECHHHHHHHHHH
T ss_pred ceeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeccCccc---cccccccccccccccccccccccccccchhHHHHHHH
Confidence 345655667788999988887664 699999999887531 0111110 0 012456788
Q ss_pred HHHHHHhcc--cccEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCC
Q psy4398 160 ILTTLISNL--SIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGS 237 (306)
Q Consensus 160 iv~~v~~~~--~~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI 237 (306)
+++++|+++ ++++.+....+|+.+++.++++.|++.|+++|. ++. .+.+++..+++++.+++||++.+.+
T Consensus 215 ~v~avR~avG~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iE-------qP~-~~~d~~~~~~l~~~~~iPIa~dE~~ 286 (424)
T 3v3w_A 215 VFAAVRKEFGPDIHLLHDVHHRLTPIEAARLGKALEPYHLFWME-------DAV-PAENQESFKLIRQHTTTPLAVGEVF 286 (424)
T ss_dssp HHHHHHHHHCSSSEEEEECTTCCCHHHHHHHHHHHGGGCCSEEE-------CCS-CCSSTTHHHHHHHHCCSCEEECTTC
T ss_pred HHHHHHHHcCCCCcEEEeCCCCCCHHHHHHHHHHHHhcCCCEEE-------CCC-ChHhHHHHHHHHhhCCCCEEEccCc
Confidence 999999988 578888888899999999999999999999985 222 2457888999999999999999999
Q ss_pred CCHHHHHHHHHhhhhhccccCCCC-Cc----hHHHHHHHHHhcCCC
Q psy4398 238 KEIVDYGGVFSLNCAFLRNHYPVE-KL----PKTILYAHCKYKRFE 278 (306)
Q Consensus 238 ~s~~~~~~~l~~~v~vGrall~~p-~~----~~~~l~~~~~~~g~~ 278 (306)
.+.++++++++.+. ...+.-++ .+ .-+.+.+..+++|++
T Consensus 287 ~~~~~~~~~i~~ga--~d~v~~k~~~~GGit~~~~ia~~A~~~gi~ 330 (424)
T 3v3w_A 287 NSIHDCRELIQNQW--IDYIRTTIVHAGGISQMRRIADFASLFHVR 330 (424)
T ss_dssp CSGGGTHHHHHTTC--CSEECCCTTTTTHHHHHHHHHHHHHTTTCE
T ss_pred CCHHHHHHHHHcCC--CCeEeecchhcCCHHHHHHHHHHHHHcCCE
Confidence 99999999988532 00111122 22 112667778888887
No 138
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=98.38 E-value=1.3e-07 Score=83.01 Aligned_cols=91 Identities=13% Similarity=0.123 Sum_probs=73.7
Q ss_pred EEEEeccCCCh------HHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHH
Q psy4398 172 VSCKIRVFHNE------ADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGG 245 (306)
Q Consensus 172 v~vKir~g~~~------~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~ 245 (306)
..||++.||.. .+..++++.++++|+|.|++++.+..+... +.+++.+++++ .+++||+++|||++.+++++
T Consensus 13 ~~vk~~~G~~~~~~~~~~~~~~~a~~~~~~Gad~i~v~d~~~~~~~~-~~~~~~i~~i~-~~~ipvi~~Ggi~~~~~~~~ 90 (241)
T 1qo2_A 13 KVARMIKGRKENTIFYEKDPVELVEKLIEEGFTLIHVVDLSNAIENS-GENLPVLEKLS-EFAEHIQIGGGIRSLDYAEK 90 (241)
T ss_dssp EEEEEGGGCGGGEEEESSCHHHHHHHHHHTTCCCEEEEEHHHHHHCC-CTTHHHHHHGG-GGGGGEEEESSCCSHHHHHH
T ss_pred EEEEEeccccccceecCcCHHHHHHHHHHcCCCEEEEecccccccCC-chhHHHHHHHH-hcCCcEEEECCCCCHHHHHH
Confidence 46777777632 368999999999999999998765432222 35789999999 88999999999999999999
Q ss_pred HHHhh---hhhccccCCCCCch
Q psy4398 246 VFSLN---CAFLRNHYPVEKLP 264 (306)
Q Consensus 246 ~l~~~---v~vGrall~~p~~~ 264 (306)
+++.+ +.+|++++.+|.+.
T Consensus 91 ~~~~Gad~V~lg~~~l~~p~~~ 112 (241)
T 1qo2_A 91 LRKLGYRRQIVSSKVLEDPSFL 112 (241)
T ss_dssp HHHTTCCEEEECHHHHHCTTHH
T ss_pred HHHCCCCEEEECchHhhChHHH
Confidence 99875 49999999988543
No 139
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=98.38 E-value=9.6e-06 Score=75.99 Aligned_cols=153 Identities=12% Similarity=0.179 Sum_probs=114.8
Q ss_pred CceEEEecCCCHHHHHHHHHH-Hhc-CCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEec
Q psy4398 102 NKIILQIGTADPERALEAAKK-VEH-DVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIR 177 (306)
Q Consensus 102 ~p~ivql~g~~~~~~~~aa~~-~~~-g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir 177 (306)
.|+...+...++++..+.++. +++ ||..+-+++|++ +++.-.+.++++|+.+ ++++.+...
T Consensus 138 v~~~~t~~~~~~~~~~~~a~~~~~~~G~~~~K~Kvg~~---------------~~~~d~~~v~avR~a~g~~~~l~vDan 202 (383)
T 3i4k_A 138 VDVTWALGVLPLDVAVAEIEERIEEFGNRSFKLKMGAG---------------DPAEDTRRVAELAREVGDRVSLRIDIN 202 (383)
T ss_dssp EEBCEEECSCCHHHHHHHHHHHHHHHCCSEEEEECCSS---------------CHHHHHHHHHHHHHTTTTTSEEEEECT
T ss_pred EEEeEEeeCCCHHHHHHHHHHHHHhcCCcEEEEeeCCC---------------CHHHHHHHHHHHHHHcCCCCEEEEECC
Confidence 455566777788887766664 566 999999998762 3556678899999998 478999988
Q ss_pred cCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhh----hh
Q psy4398 178 VFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNC----AF 253 (306)
Q Consensus 178 ~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v----~v 253 (306)
.+|+.+++.++++.+++.|+++|. ++ ..+.+++..+++++.+++||++.+.+.+.++++++++.+. ++
T Consensus 203 ~~~~~~~A~~~~~~l~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~ 274 (383)
T 3i4k_A 203 ARWDRRTALHYLPILAEAGVELFE-------QP-TPADDLETLREITRRTNVSVMADESVWTPAEALAVVKAQAADVIAL 274 (383)
T ss_dssp TCSCHHHHHHHHHHHHHTTCCEEE-------SC-SCTTCHHHHHHHHHHHCCEEEESTTCSSHHHHHHHHHHTCCSEEEE
T ss_pred CCCCHHHHHHHHHHHHhcCCCEEE-------CC-CChhhHHHHHHHHhhCCCCEEecCccCCHHHHHHHHHcCCCCEEEE
Confidence 899999999999999999999885 22 2345789999999999999999999999999999987532 11
Q ss_pred ccccCCCCCchHHHHHHHHHhcCCC
Q psy4398 254 LRNHYPVEKLPKTILYAHCKYKRFE 278 (306)
Q Consensus 254 Grall~~p~~~~~~l~~~~~~~g~~ 278 (306)
--... +-...-+.+.++.+++|++
T Consensus 275 k~~~~-GGit~~~~ia~~A~~~gi~ 298 (383)
T 3i4k_A 275 KTTKH-GGLLESKKIAAIAEAGGLA 298 (383)
T ss_dssp CTTTT-TSHHHHHHHHHHHHHTTCE
T ss_pred ccccc-CCHHHHHHHHHHHHHcCCe
Confidence 11100 1011123666777888877
No 140
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=98.37 E-value=4.6e-07 Score=96.34 Aligned_cols=103 Identities=13% Similarity=0.037 Sum_probs=77.3
Q ss_pred ChHHHHHHHHHHHhcc-cccEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcccCCCCC--------CCCCCcHHHHHHH
Q psy4398 153 TPDIACNILTTLISNL-SIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAER--------PRHRNRIEMIRTL 223 (306)
Q Consensus 153 ~~~~~~eiv~~v~~~~-~~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~--------~~~p~~~~~v~~i 223 (306)
+++.+.++++.+++.. +.||.||+-.. ......|+.++++|+|+|++++...... ..+.+....+.++
T Consensus 1011 s~edl~~~I~~Lk~~~~~~PV~VKlv~~---~gi~~~A~~a~kAGAD~IvVsG~eGGTgasp~~~~~~~GlPt~~aL~ev 1087 (1520)
T 1ofd_A 1011 SIEDLAQLIYDLHQINPEAQVSVKLVAE---IGIGTIAAGVAKANADIIQISGHDGGTGASPLSSIKHAGSPWELGVTEV 1087 (1520)
T ss_dssp SHHHHHHHHHHHHHHCTTSEEEEEEECS---TTHHHHHHHHHHTTCSEEEEECTTCCCSSEEHHHHHHBCCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCCEEEEecCC---CChHHHHHHHHHcCCCEEEEeCCCCccCCCcchhhcCCchhHHHHHHHH
Confidence 4667789999999988 89999999843 2345578889999999999987642211 1122344566666
Q ss_pred HhhC-------CCcEEEecCCCCHHHHHHHHHhhh---hhccccC
Q psy4398 224 TQHL-------KIPVIANGGSKEIVDYGGVFSLNC---AFLRNHY 258 (306)
Q Consensus 224 ~~~~-------~ipvia~GGI~s~~~~~~~l~~~v---~vGrall 258 (306)
++.+ ++|||+.|||.+..|+.+++..|+ ++||+++
T Consensus 1088 ~~al~~~glr~~IpVIAdGGIrtG~DVakALaLGAdaV~iGTafL 1132 (1520)
T 1ofd_A 1088 HRVLMENQLRDRVLLRADGGLKTGWDVVMAALMGAEEYGFGSIAM 1132 (1520)
T ss_dssp HHHHHHTTCGGGCEEEEESSCCSHHHHHHHHHTTCSEEECSHHHH
T ss_pred HHHHHhcCCCCCceEEEECCCCCHHHHHHHHHcCCCeeEEcHHHH
Confidence 6654 699999999999999999998764 8888764
No 141
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=98.35 E-value=4.1e-06 Score=73.08 Aligned_cols=125 Identities=17% Similarity=0.195 Sum_probs=88.0
Q ss_pred HHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEecc--C-CChHHHHHHHHHH
Q psy4398 116 ALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRV--F-HNEADTIALCKRL 192 (306)
Q Consensus 116 ~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~--g-~~~~~~~~~a~~l 192 (306)
..++...++.|+|.|++.+. +|.....+.+.+.+=++++++.++- ..+|+=+ + .+.++....++..
T Consensus 98 v~Ea~~Ai~~GAdEIDmViN----------ig~lk~g~~~~v~~eI~~v~~a~~~-~~lKVIlEt~~Lt~eei~~a~~ia 166 (239)
T 3ngj_A 98 AYETKVAVEQGAEEVDMVIN----------IGMVKAKKYDDVEKDVKAVVDASGK-ALTKVIIECCYLTNEEKVEVCKRC 166 (239)
T ss_dssp HHHHHHHHHTTCSEEEEECC----------HHHHHTTCHHHHHHHHHHHHHHHTT-SEEEEECCGGGSCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEee----------hHHhccccHHHHHHHHHHHHHHhcC-CceEEEEecCCCCHHHHHHHHHHH
Confidence 34444455679999998643 3444445777788878888887742 2344321 2 4667788999999
Q ss_pred HHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhC--CCcEEEecCCCCHHHHHHHHHhhh-hhcc
Q psy4398 193 EACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHL--KIPVIANGGSKEIVDYGGVFSLNC-AFLR 255 (306)
Q Consensus 193 ~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~--~ipvia~GGI~s~~~~~~~l~~~v-~vGr 255 (306)
.++|+|+|-.+-. ...+.+.++.++.+++.+ +++|-++|||+|.+++.++++.|+ -+|+
T Consensus 167 ~~aGADfVKTSTG----f~~ggAt~~dv~lmr~~vg~~v~VKasGGIrt~~da~~~i~aGA~riGt 228 (239)
T 3ngj_A 167 VAAGAEYVKTSTG----FGTHGATPEDVKLMKDTVGDKALVKAAGGIRTFDDAMKMINNGASRIGA 228 (239)
T ss_dssp HHHTCSEEECCCS----SSSCCCCHHHHHHHHHHHGGGSEEEEESSCCSHHHHHHHHHTTEEEEEE
T ss_pred HHHCcCEEECCCC----CCCCCCCHHHHHHHHHhhCCCceEEEeCCCCCHHHHHHHHHhcccceec
Confidence 9999999986522 112335677777777776 689999999999999999999876 3443
No 142
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=98.35 E-value=2.8e-06 Score=75.80 Aligned_cols=151 Identities=13% Similarity=0.190 Sum_probs=100.5
Q ss_pred ceEEEecCC--CHHHHHHHHHHHhc-CCCEEEEccCCCccccccCCcccccc----------CChHHHHHHHHHHHhc-c
Q psy4398 103 KIILQIGTA--DPERALEAAKKVEH-DVAAIDINMGCPKQFSLTGGMGAALL----------STPDIACNILTTLISN-L 168 (306)
Q Consensus 103 p~ivql~g~--~~~~~~~aa~~~~~-g~d~veln~gcP~~~~~~~~~G~~l~----------~~~~~~~eiv~~v~~~-~ 168 (306)
.++.=|... +.+.+.+.++.+.+ |+|.|||.+.-..+ ..| |-.+. -+.+.+.++++++|+. .
T Consensus 21 ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElGiPfSDP--~aD--GpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~ 96 (271)
T 3nav_A 21 AFVPFVTIGDPNPEQSLAIMQTLIDAGADALELGMPFSDP--LAD--GPTIQGANLRALAAKTTPDICFELIAQIRARNP 96 (271)
T ss_dssp EEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCCCG--GGC--CSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCT
T ss_pred eEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCC--CCC--CHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCC
Confidence 344445433 56889999887765 99999997543211 112 11111 2456778899999987 7
Q ss_pred cccEEEEeccCCChH---HHHHHHHHHHHcCCcEEEEcccCC------------------------------------CC
Q psy4398 169 SIPVSCKIRVFHNEA---DTIALCKRLEACGIIAIGVHGRTK------------------------------------AE 209 (306)
Q Consensus 169 ~~pv~vKir~g~~~~---~~~~~a~~l~~~G~d~i~v~~~~~------------------------------------~~ 209 (306)
++|+.+-.- +++- ...++++.+.++|+|++++.+-.. ..
T Consensus 97 ~~Pivlm~Y--~n~v~~~g~~~f~~~~~~aGvdGvIipDlp~ee~~~~~~~~~~~gl~~I~lvap~t~~eri~~i~~~~~ 174 (271)
T 3nav_A 97 ETPIGLLMY--ANLVYARGIDDFYQRCQKAGVDSVLIADVPTNESQPFVAAAEKFGIQPIFIAPPTASDETLRAVAQLGK 174 (271)
T ss_dssp TSCEEEEEC--HHHHHHTCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEEEEECTTCCHHHHHHHHHHCC
T ss_pred CCCEEEEec--CcHHHHHhHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHHCC
Confidence 899887543 2221 246788888888888887643210 00
Q ss_pred C---------CCC-----CC-cHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHh---hhhhccccCC
Q psy4398 210 R---------PRH-----RN-RIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSL---NCAFLRNHYP 259 (306)
Q Consensus 210 ~---------~~~-----p~-~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~---~v~vGrall~ 259 (306)
. ..| +. ..++++++++.+++||+..+||.+++++++.++. ++.+|+++.+
T Consensus 175 gfiY~vs~~GvTG~~~~~~~~~~~~v~~vr~~~~~Pv~vGfGIst~e~~~~~~~~gADgvIVGSAiv~ 242 (271)
T 3nav_A 175 GYTYLLSRAGVTGAETKANMPVHALLERLQQFDAPPALLGFGISEPAQVKQAIEAGAAGAISGSAVVK 242 (271)
T ss_dssp SCEEECCCC--------CCHHHHHHHHHHHHTTCCCEEECSSCCSHHHHHHHHHTTCSEEEESHHHHH
T ss_pred CeEEEEeccCCCCcccCCchhHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCCEEEECHHHHH
Confidence 0 011 11 2467899999999999999999999999966664 6699999863
No 143
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=98.34 E-value=6.1e-06 Score=74.49 Aligned_cols=126 Identities=12% Similarity=0.116 Sum_probs=90.7
Q ss_pred CCceEEEe---cCCCHHHHHHHHHHHhc-CCCEEEEccCCCccccccCCcc-ccccCChHHHHHHHHHHHhcccccEEEE
Q psy4398 101 KNKIILQI---GTADPERALEAAKKVEH-DVAAIDINMGCPKQFSLTGGMG-AALLSTPDIACNILTTLISNLSIPVSCK 175 (306)
Q Consensus 101 ~~p~ivql---~g~~~~~~~~aa~~~~~-g~d~veln~gcP~~~~~~~~~G-~~l~~~~~~~~eiv~~v~~~~~~pv~vK 175 (306)
+.|+++.+ +|.++++..+.++++.+ |+++|.|+-++..+ +.+..| ..+....+.+..|..++....+.++.+.
T Consensus 78 ~~PviaD~d~Gyg~~~~~~~~~v~~l~~aGa~gv~iEd~~~~k--~cgH~~gk~L~p~~~~~~~I~Aa~~a~~~~~~~i~ 155 (295)
T 1xg4_A 78 SLPLLVDADIGFGSSAFNVARTVKSMIKAGAAGLHIEDQVGAK--RSGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIM 155 (295)
T ss_dssp CSCEEEECTTCSSSSHHHHHHHHHHHHHHTCSEEEEECBCSSC--CCTTSSSCCBCCHHHHHHHHHHHHHHCSSTTSEEE
T ss_pred CCCEEecCCcccCCCHHHHHHHHHHHHHcCCeEEEECCCCCCc--ccCCCCCCccCCHHHHHHHHHHHHHhccCCCcEEE
Confidence 46999999 56689898888887764 99999999887322 222233 3354444555555444444446677777
Q ss_pred eccCC----ChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCC
Q psy4398 176 IRVFH----NEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGS 237 (306)
Q Consensus 176 ir~g~----~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI 237 (306)
-|..- ..+++++=+++++++|+|.|.+++. .+++.++++.+.+++|+++|.-.
T Consensus 156 aRtda~~~~gl~~ai~ra~ay~eAGAd~i~~e~~---------~~~~~~~~i~~~~~iP~~~N~~~ 212 (295)
T 1xg4_A 156 ARTDALAVEGLDAAIERAQAYVEAGAEMLFPEAI---------TELAMYRQFADAVQVPILANITE 212 (295)
T ss_dssp EEECCHHHHCHHHHHHHHHHHHHTTCSEEEETTC---------CSHHHHHHHHHHHCSCBEEECCS
T ss_pred EecHHhhhcCHHHHHHHHHHHHHcCCCEEEEeCC---------CCHHHHHHHHHHcCCCEEEEecc
Confidence 77422 2367899999999999999999874 26789999999999999987643
No 144
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=98.34 E-value=7.2e-06 Score=77.95 Aligned_cols=165 Identities=12% Similarity=0.086 Sum_probs=116.6
Q ss_pred CCceEEEecCCCHHHHHHHHHHHh-cCCCEEEEccCCCccccccCCcccc------------------c--cCChHHHHH
Q psy4398 101 KNKIILQIGTADPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAA------------------L--LSTPDIACN 159 (306)
Q Consensus 101 ~~p~ivql~g~~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~------------------l--~~~~~~~~e 159 (306)
..|+-..+.+.+++++++.++.+. +||..+-+.+|.|.. ...||.. + .+..+...+
T Consensus 139 ~v~~y~~~~~~~~e~~~~~a~~~~~~Gf~~iKlKvg~~~~---~~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~e 215 (425)
T 3vcn_A 139 GVTVYGHANGETIEDTIAEAVKYKAMGYKAIRLQTGVPGL---ASTYGVSKDKMFYEPADNDLPTENIWSTAKYLNSVPK 215 (425)
T ss_dssp SEEEEEEEEESSHHHHHHHHHHHHHTTCSEEEEEECCTTC---SCCTTCSSCSSCCCCCCBSSCCEEEECHHHHHTTTHH
T ss_pred eeeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeecCccc---cccccccccccccCcccccccccccccchhHHHHHHH
Confidence 345655667788999988887664 699999999886431 0111100 0 001334577
Q ss_pred HHHHHHhcc--cccEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCC
Q psy4398 160 ILTTLISNL--SIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGS 237 (306)
Q Consensus 160 iv~~v~~~~--~~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI 237 (306)
+++++|+++ ++++.+....+|+.+++.++++.|++.|+++|. ++. .+.+++..+++++.+++||++.+.+
T Consensus 216 ~v~avR~a~G~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iE-------qP~-~~~d~~~~~~l~~~~~iPIa~dE~~ 287 (425)
T 3vcn_A 216 LFERAREVLGWDVHLLHDVHHRLTPIEAARLGKDLEPYRLFWLE-------DSV-PAENQAGFRLIRQHTTTPLAVGEIF 287 (425)
T ss_dssp HHHHHHHHHCSSSEEEEECTTCCCHHHHHHHHHHHGGGCCSEEE-------CCS-CCSSTTHHHHHHHHCCSCEEECTTC
T ss_pred HHHHHHHHcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEE-------CCC-ChhhHHHHHHHHhcCCCCEEeCCCc
Confidence 889999887 578888888889999999999999999999985 222 2457788999999999999999999
Q ss_pred CCHHHHHHHHHhhhhhccccCCCC-Cch----HHHHHHHHHhcCCC
Q psy4398 238 KEIVDYGGVFSLNCAFLRNHYPVE-KLP----KTILYAHCKYKRFE 278 (306)
Q Consensus 238 ~s~~~~~~~l~~~v~vGrall~~p-~~~----~~~l~~~~~~~g~~ 278 (306)
.+.++++++++.+. ...+.-++ .+. -+.+.+..+++|++
T Consensus 288 ~~~~~~~~~i~~~a--~d~v~~k~~~~GGit~~~~ia~~A~~~gi~ 331 (425)
T 3vcn_A 288 AHVWDAKQLIEEQL--IDYLRATVLHAGGITNLKKIAAFADLHHVK 331 (425)
T ss_dssp CSGGGTHHHHHTTC--CSEECCCTTTTTHHHHHHHHHHHHGGGTCE
T ss_pred CCHHHHHHHHHcCC--CCeEecChhhcCCHHHHHHHHHHHHHcCCE
Confidence 99999999988532 00111122 121 12566777888877
No 145
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=98.33 E-value=6.4e-06 Score=73.63 Aligned_cols=124 Identities=12% Similarity=0.085 Sum_probs=85.0
Q ss_pred HHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEecc--C-CChHHHHHHHHHH
Q psy4398 116 ALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRV--F-HNEADTIALCKRL 192 (306)
Q Consensus 116 ~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~--g-~~~~~~~~~a~~l 192 (306)
..++...++.|+|.|++.+. +|.....+.+.+.+-++++++.++.+ .+|+=+ + .+.++....++..
T Consensus 129 v~Ea~~Ai~~GAdEIDmVIN----------ig~lk~g~~~~v~~eI~~V~~a~~~~-~lKVIlEt~~Lt~eei~~A~~ia 197 (288)
T 3oa3_A 129 VSEAKRAMQNGASELDMVMN----------YPWLSEKRYTDVFQDIRAVRLAAKDA-ILKVILETSQLTADEIIAGCVLS 197 (288)
T ss_dssp HHHHHHHHHTTCSEEEEECC----------HHHHHTTCHHHHHHHHHHHHHHTTTS-EEEEECCGGGCCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEee----------hhhhcCCcHHHHHHHHHHHHHHhcCC-CceEEEECCCCCHHHHHHHHHHH
Confidence 44444555679999996432 34444457788888889998888656 355443 2 4566788889999
Q ss_pred HHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhh--CCCcEEEecCCCCHHHHHHHHHhhh
Q psy4398 193 EACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQH--LKIPVIANGGSKEIVDYGGVFSLNC 251 (306)
Q Consensus 193 ~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~--~~ipvia~GGI~s~~~~~~~l~~~v 251 (306)
.++|+|+|--+-....+.. .+.+.++++++.+. .+++|.++|||++.+++.+++++|+
T Consensus 198 ~eaGADfVKTSTGf~~~GA-T~edv~lmr~~v~~~g~~v~VKAAGGIrt~edAl~mi~aGA 257 (288)
T 3oa3_A 198 SLAGADYVKTSTGFNGPGA-SIENVSLMSAVCDSLQSETRVKASGGIRTIEDCVKMVRAGA 257 (288)
T ss_dssp HHTTCSEEECCCSSSSCCC-CHHHHHHHHHHHHHSSSCCEEEEESSCCSHHHHHHHHHTTC
T ss_pred HHcCCCEEEcCCCCCCCCC-CHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHcCC
Confidence 9999999975422111111 11245556666543 3699999999999999999999876
No 146
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=98.32 E-value=5.7e-06 Score=78.96 Aligned_cols=143 Identities=11% Similarity=0.104 Sum_probs=108.3
Q ss_pred CCHHHHHHHHHHHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEeccCCChHHHHH
Q psy4398 111 ADPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIRVFHNEADTIA 187 (306)
Q Consensus 111 ~~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~ 187 (306)
.+++++.+.|+++. +||+.|.|++++ +++...++++++|+++ ++++.+....+|+.+++.+
T Consensus 197 ~~~e~~~~~a~~~~~~Gf~~vKik~g~----------------~~~~d~e~v~avR~a~G~d~~l~vDan~~~~~~~a~~ 260 (441)
T 2hxt_A 197 YSDEKLVRLAKEAVADGFRTIKLKVGA----------------NVQDDIRRCRLARAAIGPDIAMAVDANQRWDVGPAID 260 (441)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEECCS----------------CHHHHHHHHHHHHHHHCSSSEEEEECTTCCCHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEccCC----------------CHHHHHHHHHHHHHhcCCCCeEEEECCCCCCHHHHHH
Confidence 47899988888775 599999998763 3677788999999987 4778888777899999999
Q ss_pred HHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhC-CCcEEEecCCCCHHHHHHHHHhhhhhccccCCCC-Cc--
Q psy4398 188 LCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHL-KIPVIANGGSKEIVDYGGVFSLNCAFLRNHYPVE-KL-- 263 (306)
Q Consensus 188 ~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~-~ipvia~GGI~s~~~~~~~l~~~v~vGrall~~p-~~-- 263 (306)
+++.+++.|++.|- ++. .+.+++..+++++.+ ++||++.+.+.+.++++++++.+. ...+.-++ .+
T Consensus 261 ~~~~l~~~~i~~iE-------qP~-~~~d~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~~~--~d~v~ik~~~~GG 330 (441)
T 2hxt_A 261 WMRQLAEFDIAWIE-------EPT-SPDDVLGHAAIRQGITPVPVSTGEHTQNRVVFKQLLQAGA--VDLIQIDAARVGG 330 (441)
T ss_dssp HHHTTGGGCCSCEE-------CCS-CTTCHHHHHHHHHHHTTSCEEECTTCCSHHHHHHHHHHTC--CSEECCCTTTSSH
T ss_pred HHHHHHhcCCCeee-------CCC-CHHHHHHHHHHHhhCCCCCEEEeCCcCCHHHHHHHHHcCC--CCEEEeCcceeCC
Confidence 99999999999874 222 245889999999998 699999999999999999987632 00111122 11
Q ss_pred --hHHHHHHHHHhcCCCC
Q psy4398 264 --PKTILYAHCKYKRFEV 279 (306)
Q Consensus 264 --~~~~l~~~~~~~g~~~ 279 (306)
.-+.+.+..+++|++.
T Consensus 331 ite~~~ia~~A~~~g~~~ 348 (441)
T 2hxt_A 331 VNENLAILLLAAKFGVRV 348 (441)
T ss_dssp HHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHcCCeE
Confidence 1125666677777774
No 147
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=98.31 E-value=9.4e-06 Score=75.25 Aligned_cols=150 Identities=11% Similarity=0.121 Sum_probs=110.8
Q ss_pred ceEEEecCCCHHHHHHHHHHH-hcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEeccC
Q psy4398 103 KIILQIGTADPERALEAAKKV-EHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIRVF 179 (306)
Q Consensus 103 p~ivql~g~~~~~~~~aa~~~-~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g 179 (306)
|+...+...+++++.+.++.+ ++||..+-+++|++ ++.-.+.++++|+.+ ++++.+....+
T Consensus 130 ~~~~~~~~~~~~~~~~~a~~~~~~G~~~~K~K~g~~----------------~~~d~~~v~avR~a~g~~~~l~vDan~~ 193 (354)
T 3jva_A 130 ITDITLGIDEPNVMAQKAVEKVKLGFDTLKIKVGTG----------------IEADIARVKAIREAVGFDIKLRLDANQA 193 (354)
T ss_dssp ECCEEECSCCHHHHHHHHHHHHHTTCSEEEEECCSC----------------HHHHHHHHHHHHHHHCTTSEEEEECTTC
T ss_pred eeeEEeCCCCHHHHHHHHHHHHHhCCCeEEEEeCCC----------------HHHHHHHHHHHHHHcCCCCeEEEECCCC
Confidence 334556667898888777755 46999999998752 244467888898887 57788888888
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhhhhccccCC
Q psy4398 180 HNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNCAFLRNHYP 259 (306)
Q Consensus 180 ~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v~vGrall~ 259 (306)
|+.+++.++++.+++.|+++|. ++. .+.+++..+++++.+++||++.+.+.+.++++++++.+. ...+.-
T Consensus 194 ~~~~~a~~~~~~L~~~~i~~iE-------qP~-~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~--~d~v~~ 263 (354)
T 3jva_A 194 WTPKDAVKAIQALADYQIELVE-------QPV-KRRDLEGLKYVTSQVNTTIMADESCFDAQDALELVKKGT--VDVINI 263 (354)
T ss_dssp SCHHHHHHHHHHTTTSCEEEEE-------CCS-CTTCHHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHHTC--CSEEEE
T ss_pred CCHHHHHHHHHHHHhcCCCEEE-------CCC-ChhhHHHHHHHHHhCCCCEEEcCCcCCHHHHHHHHHcCC--CCEEEE
Confidence 9999999999999999988885 222 345889999999999999999999999999999987531 000001
Q ss_pred CC-----CchHHHHHHHHHhcCCC
Q psy4398 260 VE-----KLPKTILYAHCKYKRFE 278 (306)
Q Consensus 260 ~p-----~~~~~~l~~~~~~~g~~ 278 (306)
++ ...-..+.++.+++|++
T Consensus 264 k~~~~GGit~~~~i~~~A~~~gi~ 287 (354)
T 3jva_A 264 KLMKCGGIHEALKINQICETAGIE 287 (354)
T ss_dssp CHHHHTSHHHHHHHHHHHHHTTCE
T ss_pred CchhcCCHHHHHHHHHHHHHcCCe
Confidence 11 01112666777788877
No 148
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=98.31 E-value=8.1e-06 Score=76.78 Aligned_cols=144 Identities=12% Similarity=0.105 Sum_probs=110.3
Q ss_pred CCCHHHHHHHHHHHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEeccCCChHHHH
Q psy4398 110 TADPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIRVFHNEADTI 186 (306)
Q Consensus 110 g~~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~ 186 (306)
|.+++++++.++.+. +||..+.+++|+ +++.-.+.++++|+.+ +.++.+....+|+.+++.
T Consensus 153 g~~~e~~~~~a~~~~~~G~~~iKlK~g~----------------~~~~d~~~v~avR~a~g~~~~l~vDaN~~~~~~~A~ 216 (392)
T 3ddm_A 153 GINPENPEDVVARKAAEGYRAFKLKVGF----------------DDARDVRNALHVRELLGAATPLMADANQGWDLPRAR 216 (392)
T ss_dssp EECSSSHHHHHHHHHHHTCCCEEEECSS----------------CHHHHHHHHHHHHHHHCSSSCEEEECTTCCCHHHHH
T ss_pred cCCHHHHHHHHHHHHHcCCCEEEEecCC----------------CHHHHHHHHHHHHHhcCCCceEEEeCCCCCCHHHHH
Confidence 444778888877665 599999998764 3455678889999987 578999988899999999
Q ss_pred HHHHHHHHcCCcEEEEcccCCCCCCCCCCc-HHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhhhhccccCCCC-Cc-
Q psy4398 187 ALCKRLEACGIIAIGVHGRTKAERPRHRNR-IEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNCAFLRNHYPVE-KL- 263 (306)
Q Consensus 187 ~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~-~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v~vGrall~~p-~~- 263 (306)
++++.+++.|+++|- ++. .+.+ ++..+++++.+++||++.+.+.+.++++++++.+. ...+.-++ .+
T Consensus 217 ~~~~~L~~~~i~~iE-------eP~-~~~d~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a--~d~v~~k~~~~G 286 (392)
T 3ddm_A 217 QMAQRLGPAQLDWLE-------EPL-RADRPAAEWAELAQAAPMPLAGGENIAGVAAFETALAARS--LRVMQPDLAKWG 286 (392)
T ss_dssp HHHHHHGGGCCSEEE-------CCS-CTTSCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHHTC--EEEECCCTTTTT
T ss_pred HHHHHHHHhCCCEEE-------CCC-CccchHHHHHHHHHhcCCCEEeCCCCCCHHHHHHHHHcCC--CCEEEeCcchhC
Confidence 999999999999985 222 3457 89999999999999999999999999999987542 00111122 22
Q ss_pred ---hHHHHHHHHHhcCCCC
Q psy4398 264 ---PKTILYAHCKYKRFEV 279 (306)
Q Consensus 264 ---~~~~l~~~~~~~g~~~ 279 (306)
.-+.+.++.+++|++.
T Consensus 287 Git~~~~ia~~A~~~gi~~ 305 (392)
T 3ddm_A 287 GFSGCLPVARAVVAAGLRY 305 (392)
T ss_dssp HHHHHHHHHHHHHHTTCEE
T ss_pred CHHHHHHHHHHHHHcCCEE
Confidence 1236778888889885
No 149
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=98.30 E-value=1.1e-05 Score=75.13 Aligned_cols=147 Identities=10% Similarity=0.130 Sum_probs=105.4
Q ss_pred ceEEEecC-CCHHHHHHHHHHHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEecc
Q psy4398 103 KIILQIGT-ADPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIRV 178 (306)
Q Consensus 103 p~ivql~g-~~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~ 178 (306)
|+..+++. .+++++.+.++++. +||+.|.++++ | +...++++++|+.+ ++++.+....
T Consensus 131 ~~~~~~g~~~~~~~~~~~a~~~~~~Gf~~vKik~~-~-----------------~~~~e~v~avr~~~g~~~~l~vDan~ 192 (368)
T 1sjd_A 131 PCGVSVGIMDTIPQLLDVVGGYLDEGYVRIKLKIE-P-----------------GWDVEPVRAVRERFGDDVLLQVDANT 192 (368)
T ss_dssp EBEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECB-T-----------------TBSHHHHHHHHHHHCTTSEEEEECTT
T ss_pred cceEEeeCCCCHHHHHHHHHHHHHhCccEEEEecC-c-----------------hhHHHHHHHHHHhcCCCceEEEeccC
Confidence 34444443 48899988888765 59999999863 1 23356778888877 4667777666
Q ss_pred CCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhhhhccccC
Q psy4398 179 FHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNCAFLRNHY 258 (306)
Q Consensus 179 g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v~vGrall 258 (306)
+|+.++ .++++.+++.|++.|- ++. .+.+++..+++++.+++||++.+.+.+.++++++++.+. ...+.
T Consensus 193 ~~~~~~-~~~~~~l~~~~i~~iE-------~P~-~~~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~--~d~v~ 261 (368)
T 1sjd_A 193 AYTLGD-APQLARLDPFGLLLIE-------QPL-EEEDVLGHAELARRIQTPICLDESIVSARAAADAIKLGA--VQIVN 261 (368)
T ss_dssp CCCGGG-HHHHHTTGGGCCSEEE-------CCS-CTTCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHTTC--CSEEE
T ss_pred CCCHHH-HHHHHHHHhcCCCeEe-------CCC-ChhhHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHcCC--CCEEE
Confidence 899999 9999999999999874 222 346899999999999999999999999999999987532 00011
Q ss_pred CCC-C----chHHHHHHHHHhcCCC
Q psy4398 259 PVE-K----LPKTILYAHCKYKRFE 278 (306)
Q Consensus 259 ~~p-~----~~~~~l~~~~~~~g~~ 278 (306)
-++ . ..-+.+.++.+++|++
T Consensus 262 ik~~~~GGit~~~~i~~~A~~~g~~ 286 (368)
T 1sjd_A 262 IKPGRVGGYLEARRVHDVCAAHGIP 286 (368)
T ss_dssp ECTTTTTSHHHHHHHHHHHHHTTCC
T ss_pred ecccccCCHHHHHHHHHHHHHcCCc
Confidence 122 1 1123566667777776
No 150
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=98.30 E-value=4.5e-06 Score=71.40 Aligned_cols=137 Identities=12% Similarity=0.056 Sum_probs=91.5
Q ss_pred CCceEEEecCCC-HHHHHHHHHHH-hcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEecc
Q psy4398 101 KNKIILQIGTAD-PERALEAAKKV-EHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRV 178 (306)
Q Consensus 101 ~~p~ivql~g~~-~~~~~~aa~~~-~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~ 178 (306)
+.|+.+.+.-.+ ++.+ ++.+ +.|+|+|-++...+ .+.+.++++.+++. +.++.+-+.
T Consensus 53 ~~~i~~~~~~~~~~~~~---~~~~~~~Gad~v~v~~~~~----------------~~~~~~~~~~~~~~-g~~~~v~~~- 111 (211)
T 3f4w_A 53 HKEVLADAKIMDGGHFE---SQLLFDAGADYVTVLGVTD----------------VLTIQSCIRAAKEA-GKQVVVDMI- 111 (211)
T ss_dssp TSEEEEEEEECSCHHHH---HHHHHHTTCSEEEEETTSC----------------HHHHHHHHHHHHHH-TCEEEEECT-
T ss_pred CCEEEEEEEeccchHHH---HHHHHhcCCCEEEEeCCCC----------------hhHHHHHHHHHHHc-CCeEEEEec-
Confidence 457777765433 4433 3333 45999999974321 23445666666653 555555432
Q ss_pred CCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhC-CCcEEEecCCCCHHHHHHHHHhh---hhhc
Q psy4398 179 FHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHL-KIPVIANGGSKEIVDYGGVFSLN---CAFL 254 (306)
Q Consensus 179 g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~-~ipvia~GGI~s~~~~~~~l~~~---v~vG 254 (306)
+..+..+.++.+.+.|+|+|.++........ ++..++.++++++.+ ++||++.|||+ .+++.++++.| +.+|
T Consensus 112 --~~~t~~~~~~~~~~~g~d~i~v~~g~~g~~~-~~~~~~~i~~l~~~~~~~~i~~~gGI~-~~~~~~~~~~Gad~vvvG 187 (211)
T 3f4w_A 112 --CVDDLPARVRLLEEAGADMLAVHTGTDQQAA-GRKPIDDLITMLKVRRKARIAVAGGIS-SQTVKDYALLGPDVVIVG 187 (211)
T ss_dssp --TCSSHHHHHHHHHHHTCCEEEEECCHHHHHT-TCCSHHHHHHHHHHCSSCEEEEESSCC-TTTHHHHHTTCCSEEEEC
T ss_pred --CCCCHHHHHHHHHHcCCCEEEEcCCCccccc-CCCCHHHHHHHHHHcCCCcEEEECCCC-HHHHHHHHHcCCCEEEEC
Confidence 1234567788889999999987632111111 233678999999997 89999999996 99999999875 4999
Q ss_pred cccCCCCC
Q psy4398 255 RNHYPVEK 262 (306)
Q Consensus 255 rall~~p~ 262 (306)
|+++..+.
T Consensus 188 sai~~~~d 195 (211)
T 3f4w_A 188 SAITHAAD 195 (211)
T ss_dssp HHHHTCSS
T ss_pred HHHcCCCC
Confidence 99997654
No 151
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=98.29 E-value=4.5e-06 Score=77.46 Aligned_cols=124 Identities=15% Similarity=0.127 Sum_probs=102.4
Q ss_pred CceEEEecCCCHHHHHHHHHHH-hcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEecc
Q psy4398 102 NKIILQIGTADPERALEAAKKV-EHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIRV 178 (306)
Q Consensus 102 ~p~ivql~g~~~~~~~~aa~~~-~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~ 178 (306)
.|+..+++..+++++.+.++.+ ++||..+-+++|+ +++.-.+.++++|+.+ +.++.+....
T Consensus 130 v~~~~~~~~~~~~~~~~~a~~~~~~G~~~~K~K~G~----------------~~~~d~~~v~avR~~~g~~~~l~vDan~ 193 (356)
T 3ro6_B 130 LPTSVTIGIKPVEETLAEAREHLALGFRVLKVKLCG----------------DEEQDFERLRRLHETLAGRAVVRVDPNQ 193 (356)
T ss_dssp EEBCEEECSCCHHHHHHHHHHHHHTTCCEEEEECCS----------------CHHHHHHHHHHHHHHHTTSSEEEEECTT
T ss_pred eeeeEEEcCCCHHHHHHHHHHHHHcCCCEEEEEeCC----------------CHHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 4566677778899988877765 4699999999875 3455677888998887 5788888888
Q ss_pred CCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHh
Q psy4398 179 FHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSL 249 (306)
Q Consensus 179 g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~ 249 (306)
+|+.+++.++++.+++.|+++|- ++. .+.+++..+++++.+++||++.+.+.+.++++++++.
T Consensus 194 ~~~~~~a~~~~~~l~~~~i~~iE-------qP~-~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~ 256 (356)
T 3ro6_B 194 SYDRDGLLRLDRLVQELGIEFIE-------QPF-PAGRTDWLRALPKAIRRRIAADESLLGPADAFALAAP 256 (356)
T ss_dssp CCCHHHHHHHHHHHHHTTCCCEE-------CCS-CTTCHHHHHTSCHHHHHTEEESTTCCSHHHHHHHHSS
T ss_pred CCCHHHHHHHHHHHHhcCCCEEE-------CCC-CCCcHHHHHHHHhcCCCCEEeCCcCCCHHHHHHHHhc
Confidence 99999999999999999999884 222 2458899999999999999999999999999998874
No 152
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=98.27 E-value=5.6e-07 Score=79.19 Aligned_cols=82 Identities=10% Similarity=0.195 Sum_probs=67.9
Q ss_pred HHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhh---hhhccccCC
Q psy4398 183 ADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLN---CAFLRNHYP 259 (306)
Q Consensus 183 ~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~---v~vGrall~ 259 (306)
.+..++++.++++|+|.|++++....+.. .+.+++.++++++.+++||+++|||++.++++++++.+ +.+|++++.
T Consensus 31 ~d~~~~a~~~~~~Gad~i~v~d~~~~~~~-~~~~~~~i~~i~~~~~iPvi~~Ggi~~~~~~~~~~~~Gad~V~lg~~~l~ 109 (252)
T 1ka9_F 31 GDPVEAARAYDEAGADELVFLDISATHEE-RAILLDVVARVAERVFIPLTVGGGVRSLEDARKLLLSGADKVSVNSAAVR 109 (252)
T ss_dssp TCHHHHHHHHHHHTCSCEEEEECCSSTTC-HHHHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHHHHTCSEEEECHHHHH
T ss_pred CCHHHHHHHHHHcCCCEEEEEcCCccccC-ccccHHHHHHHHHhCCCCEEEECCcCCHHHHHHHHHcCCCEEEEChHHHh
Confidence 46889999999999999999876543222 23467889999999999999999999999999999875 499999999
Q ss_pred CCCchH
Q psy4398 260 VEKLPK 265 (306)
Q Consensus 260 ~p~~~~ 265 (306)
+|.+.+
T Consensus 110 ~p~~~~ 115 (252)
T 1ka9_F 110 RPELIR 115 (252)
T ss_dssp CTHHHH
T ss_pred CcHHHH
Confidence 885443
No 153
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=98.24 E-value=1.7e-05 Score=75.73 Aligned_cols=168 Identities=12% Similarity=0.098 Sum_probs=116.4
Q ss_pred CCceEEEecCCCHHHHHHHHHHH-hcCCCEEEEccCCCccc-----------cccCC------------ccccc--cCCh
Q psy4398 101 KNKIILQIGTADPERALEAAKKV-EHDVAAIDINMGCPKQF-----------SLTGG------------MGAAL--LSTP 154 (306)
Q Consensus 101 ~~p~ivql~g~~~~~~~~aa~~~-~~g~d~veln~gcP~~~-----------~~~~~------------~G~~l--~~~~ 154 (306)
..|+...+.+.+++++++.++.+ ++||..+-+.+|..... ...+. -|..+ ....
T Consensus 144 ~v~~y~~~~~~~~e~~~~~a~~~~~~Gf~~~K~KvG~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (440)
T 3t6c_A 144 GIALYVHTDGADEVEVEDSARAKMEEGYQYIRCQMGMYGGAGTDDLRLIANRMVKAKNIQPKRSPRTKAPGIYFDPEAYA 223 (440)
T ss_dssp SEEEEEEECCSSHHHHHHHHHHHHHTTCSEEEECSSSSTTCCBCCHHHHSSCBCCCSSCCCCCCCSSCCSSEECCHHHHH
T ss_pred eeEEEEECCCCCHHHHHHHHHHHHHcCCCEEEEeeccCCccccccccccccccccccccccccccccccccccccchhhH
Confidence 34566567778899998887765 46999999998743210 00000 00000 0114
Q ss_pred HHHHHHHHHHHhcc--cccEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEE
Q psy4398 155 DIACNILTTLISNL--SIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVI 232 (306)
Q Consensus 155 ~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvi 232 (306)
+...+.++++|+++ ++++.+....+|+.+++.++++.|++.|+++|- ++. .+.+++..+++++.+++||+
T Consensus 224 ~~d~~~v~avR~a~G~d~~L~vDaN~~~~~~~A~~~~~~L~~~~i~~iE-------eP~-~~~d~~~~~~l~~~~~iPIa 295 (440)
T 3t6c_A 224 KSIPRLFDHLRNKLGFSVELLHDAHERITPINAIHMAKALEPYQLFFLE-------DPV-APENTEWLKMLRQQSSTPIA 295 (440)
T ss_dssp HHHHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHTGGGCCSEEE-------CSS-CGGGGGGHHHHHHHCCSCEE
T ss_pred HHHHHHHHHHHHhcCCCCeEEEECCCCCCHHHHHHHHHHhhhcCCCEEE-------CCC-ChhhHHHHHHHHhhcCCCEE
Confidence 56678899999988 578999988899999999999999999999885 222 24578888999999999999
Q ss_pred EecCCCCHHHHHHHHHhhhhhccccCCCC-C----chHHHHHHHHHhcCCC
Q psy4398 233 ANGGSKEIVDYGGVFSLNCAFLRNHYPVE-K----LPKTILYAHCKYKRFE 278 (306)
Q Consensus 233 a~GGI~s~~~~~~~l~~~v~vGrall~~p-~----~~~~~l~~~~~~~g~~ 278 (306)
+...+.+.++++++++.+. ...+.-++ . ..-+.+.+..+++|++
T Consensus 296 ~dE~~~~~~~~~~~i~~~a--~d~v~~k~~~~GGit~~~~ia~~A~~~gi~ 344 (440)
T 3t6c_A 296 MGELFVNVNEWKPLIDNKL--IDYIRCHISSIGGITPAKKIAIYSELNGVR 344 (440)
T ss_dssp ECTTCCSHHHHHHHHHTTC--CSEECCCGGGGTSHHHHHHHHHHHHHTTCE
T ss_pred eCcccCCHHHHHHHHHcCC--ccceeechhhhCCHHHHHHHHHHHHHcCCE
Confidence 9999999999999987532 00011111 1 1112566777788877
No 154
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=98.24 E-value=8.2e-07 Score=78.19 Aligned_cols=81 Identities=15% Similarity=0.233 Sum_probs=67.0
Q ss_pred HHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhh---hhhccccCC
Q psy4398 183 ADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLN---CAFLRNHYP 259 (306)
Q Consensus 183 ~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~---v~vGrall~ 259 (306)
.+..++++.++++|+|.|+++..+.... ..+.+++.++++++.+++||+++|||+++++++++++.+ +.+|++++.
T Consensus 30 ~d~~~~a~~~~~~Gad~i~v~d~~~~~~-~~~~~~~~i~~i~~~~~ipvi~~ggI~~~~~~~~~~~~Gad~V~lg~~~l~ 108 (253)
T 1thf_D 30 GDPVELGKFYSEIGIDELVFLDITASVE-KRKTMLELVEKVAEQIDIPFTVGGGIHDFETASELILRGADKVSINTAAVE 108 (253)
T ss_dssp TCHHHHHHHHHHTTCCEEEEEESSCSSS-HHHHHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHHHTTCSEEEESHHHHH
T ss_pred cCHHHHHHHHHHcCCCEEEEECCchhhc-CCcccHHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHcCCCEEEEChHHHh
Confidence 4678999999999999999987654321 123467889999999999999999999999999999875 499999998
Q ss_pred CCCch
Q psy4398 260 VEKLP 264 (306)
Q Consensus 260 ~p~~~ 264 (306)
+|.+.
T Consensus 109 ~p~~~ 113 (253)
T 1thf_D 109 NPSLI 113 (253)
T ss_dssp CTHHH
T ss_pred ChHHH
Confidence 88543
No 155
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=98.22 E-value=4.1e-05 Score=71.69 Aligned_cols=155 Identities=12% Similarity=0.051 Sum_probs=115.9
Q ss_pred CCceEEEecCCCHHHHHHHHHHH-hc-CCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEe
Q psy4398 101 KNKIILQIGTADPERALEAAKKV-EH-DVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKI 176 (306)
Q Consensus 101 ~~p~ivql~g~~~~~~~~aa~~~-~~-g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKi 176 (306)
..|+..++...+++++.+.++.+ ++ ||..+-+.+|.+ +++.-.+.++++|+.+ +.++.+..
T Consensus 156 ~v~~y~s~g~~~~e~~~~~a~~~~~~~G~~~~KlKvG~~---------------~~~~d~~~v~avR~a~G~~~~l~vDa 220 (383)
T 3toy_A 156 PIPAYDSYGVLDARDDERTLRTACDEHGFRAIKSKGGHG---------------DLATDEAMIKGLRALLGPDIALMLDF 220 (383)
T ss_dssp CEEEEEECSSCCHHHHHHHHHHHHHTSCCCEEEEECCSS---------------CHHHHHHHHHHHHHHHCTTSEEEEEC
T ss_pred ceEEeEecCCCCHHHHHHHHHHHHHccCCcEEEEecCCC---------------CHHHHHHHHHHHHHHhCCCCeEEEeC
Confidence 34666666557888888777654 67 999999987753 3455567888999887 56788888
Q ss_pred ccCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhhhhccc
Q psy4398 177 RVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNCAFLRN 256 (306)
Q Consensus 177 r~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v~vGra 256 (306)
..+|+.+++.++++.+++.|+++|- ++ ..+.+++..+++++.+++||++...+.+..+++++++.+. ...
T Consensus 221 N~~~~~~~A~~~~~~l~~~~i~~iE-------eP-~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a--~d~ 290 (383)
T 3toy_A 221 NQSLDPAEATRRIARLADYDLTWIE-------EP-VPQENLSGHAAVRERSEIPIQAGENWWFPRGFAEAIAAGA--SDF 290 (383)
T ss_dssp TTCSCHHHHHHHHHHHGGGCCSEEE-------CC-SCTTCHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHHHTC--CSE
T ss_pred CCCCCHHHHHHHHHHHHhhCCCEEE-------CC-CCcchHHHHHHHHhhcCCCEEeCCCcCCHHHHHHHHHcCC--CCE
Confidence 8889999999999999999999884 22 2345889999999999999999999999999999987532 001
Q ss_pred cCCCC-Cch----HHHHHHHHHhcCCCCC
Q psy4398 257 HYPVE-KLP----KTILYAHCKYKRFEVP 280 (306)
Q Consensus 257 ll~~p-~~~----~~~l~~~~~~~g~~~~ 280 (306)
+.-++ .+. -+.+.+..+++|++..
T Consensus 291 v~ik~~~~GGit~~~~ia~~A~~~gi~~~ 319 (383)
T 3toy_A 291 IMPDLMKVGGITGWLNVAGQADAASIPMS 319 (383)
T ss_dssp ECCCTTTTTHHHHHHHHHHHHHHHTCCBC
T ss_pred EEeCccccCCHHHHHHHHHHHHHcCCEEe
Confidence 11222 221 1267778888898843
No 156
>4e4f_A Mannonate dehydratase; magnesium binding, enzyme function initiative, isomerase; 2.00A {Pectobacterium carotovorum subsp}
Probab=98.22 E-value=1.3e-05 Score=76.28 Aligned_cols=169 Identities=10% Similarity=0.090 Sum_probs=114.3
Q ss_pred CCceEEEecCCCHHHHHHHHHHH-hcCCCEEEEccCCCccccc---cCCccc----------------cccCChHHHHHH
Q psy4398 101 KNKIILQIGTADPERALEAAKKV-EHDVAAIDINMGCPKQFSL---TGGMGA----------------ALLSTPDIACNI 160 (306)
Q Consensus 101 ~~p~ivql~g~~~~~~~~aa~~~-~~g~d~veln~gcP~~~~~---~~~~G~----------------~l~~~~~~~~ei 160 (306)
..|+-....+.++++..+.++.. ++||..+-+.+|.|..... ..+.+. ...+..++..++
T Consensus 138 ~v~~y~~~~~~~~~~~~~~~~~~~~~Gf~~iKikvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 217 (426)
T 4e4f_A 138 GVMVYCHTTGHSIDEVLDDYAKHRDQGFKAIRVQCGVPGMETTYGMAKGKGLAYEPATKGSLPEEQLWSTEKYLDFTPKL 217 (426)
T ss_dssp SEEEEEEECCSSHHHHHHHHHHHHHTTCSEEEECC-------------------CCSEESSSCCEEEECHHHHHHHHHHH
T ss_pred ceeEeEeCCCCCHHHHHHHHHHHHHcCCCEEEEeccCCccccccccccccccccccccccccccccccchhHHHHHHHHH
Confidence 34666667778888776666544 5699999999987642100 000000 001123566789
Q ss_pred HHHHHhcc--cccEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCC
Q psy4398 161 LTTLISNL--SIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSK 238 (306)
Q Consensus 161 v~~v~~~~--~~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~ 238 (306)
++++|+++ ++++.+....+|+.+++.++++.|++.|+++|. ++. .+.+++..+++++.+++||++.+.+.
T Consensus 218 v~avR~a~G~d~~L~vDaN~~~~~~~A~~~~~~L~~~~i~~iE-------eP~-~~~d~~~~~~l~~~~~iPIa~dE~~~ 289 (426)
T 4e4f_A 218 FEAVRDKFGFNEHLLHDMHHRLTPIEAARFGKSVEDYRLFWME-------DPT-PAENQACFRLIRQHTVTPIAVGEVFN 289 (426)
T ss_dssp HHHHHHHHTTSSEEEEECTTCSCHHHHHHHHHHTGGGCCSEEE-------CCS-CCSSGGGGHHHHTTCCSCEEECTTCC
T ss_pred HHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHhhcCCCEEE-------CCC-ChHHHHHHHHHHhcCCCCEEeCCCcC
Confidence 99999998 578888888899999999999999999999985 222 24578888999999999999999999
Q ss_pred CHHHHHHHHHhhhhhccccCCCC-Cch----HHHHHHHHHhcCCCC
Q psy4398 239 EIVDYGGVFSLNCAFLRNHYPVE-KLP----KTILYAHCKYKRFEV 279 (306)
Q Consensus 239 s~~~~~~~l~~~v~vGrall~~p-~~~----~~~l~~~~~~~g~~~ 279 (306)
+.++++++++.+. ...+.-++ .+. -+.+.+..+++|++.
T Consensus 290 ~~~~~~~~i~~ga--~d~v~~k~~~~GGit~~~~ia~~A~~~gi~v 333 (426)
T 4e4f_A 290 SIWDCKQLIEEQL--IDYIRTTITHAGGITGMRRIADFASLYQVRT 333 (426)
T ss_dssp SGGGTHHHHHTTC--CSEECCCTTTTTHHHHHHHHHHHHHTTTCEE
T ss_pred CHHHHHHHHHcCC--CCEEEeCccccCCHHHHHHHHHHHHHcCCEE
Confidence 9999999987532 00111122 221 126677788888873
No 157
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=98.22 E-value=4.3e-05 Score=68.23 Aligned_cols=144 Identities=15% Similarity=0.156 Sum_probs=96.8
Q ss_pred CCceEEEecCCCHHHHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEeccCC
Q psy4398 101 KNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFH 180 (306)
Q Consensus 101 ~~p~ivql~g~~~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~ 180 (306)
+.|++..=+..++.+..++ ...|+|+|=|.... + +++.+.++++..++ .+..+.+-+.
T Consensus 113 ~lPvl~kdfiid~~qv~~A---~~~GAD~VlLi~a~--------------l-~~~~l~~l~~~a~~-lGl~~lvev~--- 170 (272)
T 3qja_A 113 SIPVLRKDFVVQPYQIHEA---RAHGADMLLLIVAA--------------L-EQSVLVSMLDRTES-LGMTALVEVH--- 170 (272)
T ss_dssp SSCEEEESCCCSHHHHHHH---HHTTCSEEEEEGGG--------------S-CHHHHHHHHHHHHH-TTCEEEEEES---
T ss_pred CCCEEECccccCHHHHHHH---HHcCCCEEEEeccc--------------C-CHHHHHHHHHHHHH-CCCcEEEEcC---
Confidence 3566654344555444333 23599999985331 1 24456777777665 5777777766
Q ss_pred ChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhC--CCcEEEecCCCCHHHHHHHHHhh---hhhcc
Q psy4398 181 NEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHL--KIPVIANGGSKEIVDYGGVFSLN---CAFLR 255 (306)
Q Consensus 181 ~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~--~ipvia~GGI~s~~~~~~~l~~~---v~vGr 255 (306)
+.++ ++.+.+.|+|.|.++++..... +.+++.+.++.+.+ ++|+|+.|||.+++++.++.+.| +.+|+
T Consensus 171 t~ee----~~~A~~~Gad~IGv~~r~l~~~---~~dl~~~~~l~~~v~~~~pvVaegGI~t~edv~~l~~~GadgvlVGs 243 (272)
T 3qja_A 171 TEQE----ADRALKAGAKVIGVNARDLMTL---DVDRDCFARIAPGLPSSVIRIAESGVRGTADLLAYAGAGADAVLVGE 243 (272)
T ss_dssp SHHH----HHHHHHHTCSEEEEESBCTTTC---CBCTTHHHHHGGGSCTTSEEEEESCCCSHHHHHHHHHTTCSEEEECH
T ss_pred CHHH----HHHHHHCCCCEEEECCCccccc---ccCHHHHHHHHHhCcccCEEEEECCCCCHHHHHHHHHcCCCEEEEcH
Confidence 3232 3344567999999997653322 23677888999888 79999999999999999999875 59999
Q ss_pred ccCCCCCchHHHHHHHHHh
Q psy4398 256 NHYPVEKLPKTILYAHCKY 274 (306)
Q Consensus 256 all~~p~~~~~~l~~~~~~ 274 (306)
+++..+. +...++++.+.
T Consensus 244 al~~a~d-p~~~~~~l~~~ 261 (272)
T 3qja_A 244 GLVTSGD-PRAAVADLVTA 261 (272)
T ss_dssp HHHTCSC-HHHHHHHHHTT
T ss_pred HHhCCCC-HHHHHHHHHhh
Confidence 9987553 33445555543
No 158
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=98.22 E-value=3.1e-05 Score=72.17 Aligned_cols=150 Identities=13% Similarity=0.157 Sum_probs=112.3
Q ss_pred ceEEEecCCCHHHHHHHHHHH-hcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEeccC
Q psy4398 103 KIILQIGTADPERALEAAKKV-EHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIRVF 179 (306)
Q Consensus 103 p~ivql~g~~~~~~~~aa~~~-~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g 179 (306)
|....+...+++++.+.++.+ ++||..+-+.+|+ +++.-.+.++++|+.+ +.++.+....+
T Consensus 131 ~~~~~~~~~~~e~~~~~a~~~~~~G~~~~K~KvG~----------------~~~~d~~~v~avR~~~g~~~~l~vDaN~~ 194 (368)
T 3q45_A 131 QTDYTVSIDEPHKMAADAVQIKKNGFEIIKVKVGG----------------SKELDVERIRMIREAAGDSITLRIDANQG 194 (368)
T ss_dssp EBCEEECSCCHHHHHHHHHHHHHTTCSEEEEECCS----------------CHHHHHHHHHHHHHHHCSSSEEEEECTTC
T ss_pred eeEEEecCCCHHHHHHHHHHHHHcCCCeEEEEecC----------------CHHHHHHHHHHHHHHhCCCCeEEEECCCC
Confidence 444567777899988877755 4699999998764 2445567888999887 47788888878
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhhhhccccCC
Q psy4398 180 HNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNCAFLRNHYP 259 (306)
Q Consensus 180 ~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v~vGrall~ 259 (306)
|+.+++.++++.+++.|+++|- ++. .+.+++..+++++.+++||++.+.+.+.++++++++.+. ...+.-
T Consensus 195 ~~~~~A~~~~~~l~~~~i~~iE-------qP~-~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~--~d~v~~ 264 (368)
T 3q45_A 195 WSVETAIETLTLLEPYNIQHCE-------EPV-SRNLYTALPKIRQACRIPIMADESCCNSFDAERLIQIQA--CDSFNL 264 (368)
T ss_dssp BCHHHHHHHHHHHGGGCCSCEE-------CCB-CGGGGGGHHHHHHTCSSCEEESTTCCSHHHHHHHHHTTC--CSEEEE
T ss_pred CChHHHHHHHHHHhhcCCCEEE-------CCC-ChhHHHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHcCC--CCeEEe
Confidence 9999999999999999999885 222 244778889999999999999999999999999987532 000111
Q ss_pred CC-Cc----hHHHHHHHHHhcCCC
Q psy4398 260 VE-KL----PKTILYAHCKYKRFE 278 (306)
Q Consensus 260 ~p-~~----~~~~l~~~~~~~g~~ 278 (306)
++ .+ .-+.+.++.+++|++
T Consensus 265 k~~~~GGit~~~~i~~~A~~~gi~ 288 (368)
T 3q45_A 265 KLSKSAGITNALNIIRLAEQAHMP 288 (368)
T ss_dssp CTTTTTSHHHHHHHHHHHHHTTCC
T ss_pred chhhcCCHHHHHHHHHHHHHcCCc
Confidence 22 11 223677778888887
No 159
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=98.22 E-value=2.1e-05 Score=69.33 Aligned_cols=126 Identities=16% Similarity=0.149 Sum_probs=88.7
Q ss_pred HHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhccc-ccEEEEeccC-CChHHHHHHHHHHH
Q psy4398 116 ALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLS-IPVSCKIRVF-HNEADTIALCKRLE 193 (306)
Q Consensus 116 ~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~-~pv~vKir~g-~~~~~~~~~a~~l~ 193 (306)
..++...++.|+|.|++.+. +|.....+.+.+.+=++++++.++ .|+-|=+-.+ .+.++....++.+.
T Consensus 114 v~Ea~~Ai~~GAdEIDmViN----------ig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~Lt~eei~~A~~ia~ 183 (260)
T 3r12_A 114 AHEAIFAVESGADEIDMVIN----------VGMLKAKEWEYVYEDIRSVVESVKGKVVKVIIETCYLDTEEKIAACVISK 183 (260)
T ss_dssp HHHHHHHHHHTCSEEEEECC----------HHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEee----------hhhhccccHHHHHHHHHHHHHhcCCCcEEEEEeCCCCCHHHHHHHHHHHH
Confidence 33444455669999998532 444445677888888888888774 4433323323 45677889999999
Q ss_pred HcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhC--CCcEEEecCCCCHHHHHHHHHhhh-hhcc
Q psy4398 194 ACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHL--KIPVIANGGSKEIVDYGGVFSLNC-AFLR 255 (306)
Q Consensus 194 ~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~--~ipvia~GGI~s~~~~~~~l~~~v-~vGr 255 (306)
++|+|+|-.+- +...+.+.++.++.+++.+ +++|-++|||+|.+++.+++++|+ -+|+
T Consensus 184 eaGADfVKTST----Gf~~~GAT~edV~lm~~~vg~~v~VKaAGGIrt~~~al~mi~aGA~RiGt 244 (260)
T 3r12_A 184 LAGAHFVKTST----GFGTGGATAEDVHLMKWIVGDEMGVKASGGIRTFEDAVKMIMYGADRIGT 244 (260)
T ss_dssp HTTCSEEECCC----SSSSCCCCHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHTTCSEEEE
T ss_pred HhCcCEEEcCC----CCCCCCCCHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHcCCceeec
Confidence 99999997542 2222335677777777776 699999999999999999999876 3443
No 160
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=98.22 E-value=3.4e-05 Score=72.45 Aligned_cols=152 Identities=12% Similarity=0.111 Sum_probs=113.3
Q ss_pred CceEEEecC---CCHHHHHHHHHH-Hhc---CCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccE
Q psy4398 102 NKIILQIGT---ADPERALEAAKK-VEH---DVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPV 172 (306)
Q Consensus 102 ~p~ivql~g---~~~~~~~~aa~~-~~~---g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv 172 (306)
.|+..++++ .+++++.+.++. +++ ||..+-+.+|.+ +++.-.+.++++|+.+ +.++
T Consensus 158 v~~y~s~g~~~~~~~e~~~~~a~~~~~~~~~G~~~iKlKvG~~---------------~~~~d~~~v~avR~a~G~~~~l 222 (390)
T 3ugv_A 158 VKAYNSNGLWLKSPAEVAAEAVELKAEGQGTGFKGLKLRMGRD---------------DPAVDIETAEAVWDAVGRDTAL 222 (390)
T ss_dssp EEEEECSCCCSSCHHHHHHHHHHHHHTTCTTCCSEEEEECCCS---------------SHHHHHHHHHHHHHHHCTTSEE
T ss_pred eEEEEecccccCCCHHHHHHHHHHHHHhhhCCCcEEEEecCCC---------------CHHHHHHHHHHHHHHhCCCCEE
Confidence 455555555 678888777664 467 999999987753 2455567888999887 5688
Q ss_pred EEEeccCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhhh
Q psy4398 173 SCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNCA 252 (306)
Q Consensus 173 ~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v~ 252 (306)
.+....+|+.+++.++++.+++.|+++|- ++. .+.+++..+++++.+++||++...+.+..+++++++.+.
T Consensus 223 ~vDaN~~~~~~~A~~~~~~l~~~~i~~iE-------qP~-~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a- 293 (390)
T 3ugv_A 223 MVDFNQGLDMAEAMHRTRQIDDLGLEWIE-------EPV-VYDNFDGYAQLRHDLKTPLMIGENFYGPREMHQALQAGA- 293 (390)
T ss_dssp EEECTTCCCHHHHHHHHHHHTTSCCSEEE-------CCS-CTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTC-
T ss_pred EEECCCCCCHHHHHHHHHHHHhhCCCEEE-------CCC-CcccHHHHHHHHHhcCCCEEeCCCcCCHHHHHHHHHcCC-
Confidence 88888889999999999999999999884 222 345889999999999999999999999999999987532
Q ss_pred hccccCCCCCchH-------HHHHHHHHhcCCCCC
Q psy4398 253 FLRNHYPVEKLPK-------TILYAHCKYKRFEVP 280 (306)
Q Consensus 253 vGrall~~p~~~~-------~~l~~~~~~~g~~~~ 280 (306)
.-+-+|...+ +.+.+..+++|++..
T Consensus 294 ---~d~v~ik~~~~GGit~~~~i~~~A~~~gi~~~ 325 (390)
T 3ugv_A 294 ---CDLVMPDFMRIGGVSGWMRAAGVAGAWGIPMS 325 (390)
T ss_dssp ---CSEECCBHHHHTHHHHHHHHHHHHHHHTCCBC
T ss_pred ---CCEEEeCccccCCHHHHHHHHHHHHHcCCEEe
Confidence 1112232222 256667778888743
No 161
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=98.20 E-value=1.4e-05 Score=68.96 Aligned_cols=87 Identities=15% Similarity=0.123 Sum_probs=61.5
Q ss_pred HHHHHHcCCcEEEEcccCCCCCCC--CCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhh---hhhccccCCCCCc
Q psy4398 189 CKRLEACGIIAIGVHGRTKAERPR--HRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLN---CAFLRNHYPVEKL 263 (306)
Q Consensus 189 a~~l~~~G~d~i~v~~~~~~~~~~--~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~---v~vGrall~~p~~ 263 (306)
++.+.+.|+|+|.+.......... .+..|+.++++++.+++||++.||| +.+++.++++.| +++|++++..+..
T Consensus 123 ~~~a~~~gaD~i~~~~~f~~~~~~g~~~~~~~~l~~~~~~~~~pvia~GGI-~~~nv~~~~~~Ga~gv~vgs~i~~~~d~ 201 (221)
T 1yad_A 123 AVQAEKEDADYVLFGHVFETDCKKGLEGRGVSLLSDIKQRISIPVIAIGGM-TPDRLRDVKQAGADGIAVMSGIFSSAEP 201 (221)
T ss_dssp HHHHHHTTCSEEEEECCC----------CHHHHHHHHHHHCCSCEEEESSC-CGGGHHHHHHTTCSEEEESHHHHTSSSH
T ss_pred HHHHHhCCCCEEEECCccccCCCCCCCCCCHHHHHHHHHhCCCCEEEECCC-CHHHHHHHHHcCCCEEEEhHHhhCCCCH
Confidence 566678999999986532111111 2467899999998889999999999 899999999875 5999999876542
Q ss_pred hH-H-HHHHHHHhcC
Q psy4398 264 PK-T-ILYAHCKYKR 276 (306)
Q Consensus 264 ~~-~-~l~~~~~~~g 276 (306)
.+ . .+.+.+++.+
T Consensus 202 ~~~~~~~~~~~~~~~ 216 (221)
T 1yad_A 202 LEAARRYSRKLKEMR 216 (221)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhh
Confidence 22 2 5555555555
No 162
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=98.20 E-value=4.3e-05 Score=71.25 Aligned_cols=155 Identities=13% Similarity=0.116 Sum_probs=113.9
Q ss_pred CceEEEecC---CCHHHHHHHHHH-Hhc-CCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEE
Q psy4398 102 NKIILQIGT---ADPERALEAAKK-VEH-DVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSC 174 (306)
Q Consensus 102 ~p~ivql~g---~~~~~~~~aa~~-~~~-g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~v 174 (306)
.|+..++.+ .+++++.+.++. +++ ||..+-+++|+|. ++.-.+.++++|+.+ +.++.+
T Consensus 138 v~~y~s~~~~~~~~~~~~~~~a~~~~~~~G~~~~K~Kvg~~~---------------~~~d~~~v~avR~~~g~~~~l~v 202 (372)
T 3tj4_A 138 VEAYNTDIGWLSFTLEDLLAGSARAVEEDGFTRLKIKVGHDD---------------PNIDIARLTAVRERVDSAVRIAI 202 (372)
T ss_dssp EEEEECTTCCTTSCHHHHHHHHHHHHHTTCCCEEEEECCCSS---------------HHHHHHHHHHHHHHSCTTCEEEE
T ss_pred eEEEEecCCccCCCHHHHHHHHHHHHHccCCCEEEEcCCCCC---------------HHHHHHHHHHHHHHcCCCCcEEe
Confidence 455554333 378888776664 467 9999999988643 344577889999988 578888
Q ss_pred EeccCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhhhhc
Q psy4398 175 KIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNCAFL 254 (306)
Q Consensus 175 Kir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v~vG 254 (306)
....+|+.+++.++++.+++.|+++|- ++. .+.+++..+++++.+++||++...+.+.++++++++.+. .
T Consensus 203 Dan~~~~~~~a~~~~~~l~~~~i~~iE-------qP~-~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~--~ 272 (372)
T 3tj4_A 203 DGNGKWDLPTCQRFCAAAKDLDIYWFE-------EPL-WYDDVTSHARLARNTSIPIALGEQLYTVDAFRSFIDAGA--V 272 (372)
T ss_dssp ECTTCCCHHHHHHHHHHTTTSCEEEEE-------SCS-CTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTC--C
T ss_pred eCCCCCCHHHHHHHHHHHhhcCCCEEE-------CCC-CchhHHHHHHHHhhcCCCEEeCCCccCHHHHHHHHHcCC--C
Confidence 888889999999999999999988774 222 245889999999999999999999999999999987532 0
Q ss_pred cccCCCC-Cc----hHHHHHHHHHhcCCCCCc
Q psy4398 255 RNHYPVE-KL----PKTILYAHCKYKRFEVPK 281 (306)
Q Consensus 255 rall~~p-~~----~~~~l~~~~~~~g~~~~~ 281 (306)
..+.-++ .+ .-+.+.++.+++|++...
T Consensus 273 d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~ 304 (372)
T 3tj4_A 273 AYVQPDVTRLGGITEYIQVADLALAHRLPVVP 304 (372)
T ss_dssp SEECCCTTTTTHHHHHHHHHHHHHHTTCCBCC
T ss_pred CEEEeCccccCCHHHHHHHHHHHHHcCCEEEe
Confidence 0111222 22 123677788889988543
No 163
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=98.20 E-value=2.2e-05 Score=68.19 Aligned_cols=121 Identities=17% Similarity=0.232 Sum_probs=87.3
Q ss_pred HHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEecc--C-C----ChHHHHHH
Q psy4398 116 ALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRV--F-H----NEADTIAL 188 (306)
Q Consensus 116 ~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~--g-~----~~~~~~~~ 188 (306)
..++...++.|+|.|++.+. +|.....+.+.+.+-++++++.++ ...+|+=+ + . +.++....
T Consensus 83 ~~E~~~Ai~~GAdEIDmVin----------ig~lk~g~~~~v~~ei~~v~~a~~-~~~lKvIiEt~~L~~~~t~eei~~a 151 (231)
T 3ndo_A 83 ATEAELAVAAGATEIDMVID----------VGAALAGDLDAVSADITAVRKAVR-AATLKVIVESAALLEFSGEPLLADV 151 (231)
T ss_dssp HHHHHHHHHTTCSEEEEECC----------HHHHHTTCHHHHHHHHHHHHHHTT-TSEEEEECCHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEee----------hHhhhcccHHHHHHHHHHHHHHcc-CCceEEEEECcccCCCCCHHHHHHH
Confidence 34444455679999998643 454455677888888888888884 23345433 2 3 56678889
Q ss_pred HHHHHHcCCcEEEEcccCCCCCC-CCCCcHHHHHHHHhhC--CCcEEEecCCCCHHHHHHHHHhhh
Q psy4398 189 CKRLEACGIIAIGVHGRTKAERP-RHRNRIEMIRTLTQHL--KIPVIANGGSKEIVDYGGVFSLNC 251 (306)
Q Consensus 189 a~~l~~~G~d~i~v~~~~~~~~~-~~p~~~~~v~~i~~~~--~ipvia~GGI~s~~~~~~~l~~~v 251 (306)
++...++|+|+|-.+-. .. .+.+.++.++.+++.+ +++|-++|||+|.+++.++++.|+
T Consensus 152 ~~ia~~aGADfVKTSTG----f~~~~gAt~edv~lm~~~v~~~v~VKaaGGIrt~~~a~~~i~aGa 213 (231)
T 3ndo_A 152 CRVARDAGADFVKTSTG----FHPSGGASVQAVEIMARTVGERLGVKASGGIRTAEQAAAMLDAGA 213 (231)
T ss_dssp HHHHHHTTCSEEECCCS----CCTTCSCCHHHHHHHHHHHTTTSEEEEESSCCSHHHHHHHHHTTC
T ss_pred HHHHHHHCcCEEEcCCC----CCCCCCCCHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHhcc
Confidence 99999999999975422 11 2345677777777776 699999999999999999999866
No 164
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=98.18 E-value=1.4e-05 Score=71.08 Aligned_cols=143 Identities=15% Similarity=0.127 Sum_probs=93.0
Q ss_pred CCHHHHHHHHHHHhc-CCCEEEEccCCCccccccCCcccccc----------CChHHHHHHHHHHHhcc-cccEEEEecc
Q psy4398 111 ADPERALEAAKKVEH-DVAAIDINMGCPKQFSLTGGMGAALL----------STPDIACNILTTLISNL-SIPVSCKIRV 178 (306)
Q Consensus 111 ~~~~~~~~aa~~~~~-g~d~veln~gcP~~~~~~~~~G~~l~----------~~~~~~~eiv~~v~~~~-~~pv~vKir~ 178 (306)
.+.+.+.+.++.+.+ |+|.|||++.- .....| |..+. -+.+.+.++++++|+.+ +.|+.+ +.
T Consensus 28 p~~~~~~~~~~~l~~~G~D~IElG~P~--sdP~ad--gp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pi~~-m~- 101 (262)
T 2ekc_A 28 PDYETSLKAFKEVLKNGTDILEIGFPF--SDPVAD--GPTIQVAHEVALKNGIRFEDVLELSETLRKEFPDIPFLL-MT- 101 (262)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEECCC--SCCTTS--CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEE-EC-
T ss_pred CChHHHHHHHHHHHHcCCCEEEECCCC--CCcccc--cHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCCEEE-Ee-
Confidence 456788888887765 99999996532 111111 11110 24566788999999888 889877 21
Q ss_pred CCChH---HHHHHHHHHHHcCCcEEEEcccC-----------------------CC-------------CC---------
Q psy4398 179 FHNEA---DTIALCKRLEACGIIAIGVHGRT-----------------------KA-------------ER--------- 210 (306)
Q Consensus 179 g~~~~---~~~~~a~~l~~~G~d~i~v~~~~-----------------------~~-------------~~--------- 210 (306)
.++.- ...++++.+.++|+|++++.+.. .. ..
T Consensus 102 y~n~v~~~g~~~f~~~~~~aG~dgvii~dl~~ee~~~~~~~~~~~gl~~i~l~~p~t~~~rl~~ia~~a~gfiy~vs~~g 181 (262)
T 2ekc_A 102 YYNPIFRIGLEKFCRLSREKGIDGFIVPDLPPEEAEELKAVMKKYVLSFVPLGAPTSTRKRIKLICEAADEMTYFVSVTG 181 (262)
T ss_dssp CHHHHHHHCHHHHHHHHHHTTCCEEECTTCCHHHHHHHHHHHHHTTCEECCEECTTCCHHHHHHHHHHCSSCEEEESSCC
T ss_pred cCcHHHHhhHHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHhCCCCEEEEecCC
Confidence 12211 13577777888888887754321 00 00
Q ss_pred CC---CCC----cHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHH--hhhhhccccCC
Q psy4398 211 PR---HRN----RIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFS--LNCAFLRNHYP 259 (306)
Q Consensus 211 ~~---~p~----~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~--~~v~vGrall~ 259 (306)
.. .+. ..++++++++.+++||+..+||.+++++.++.. .++.+|++++.
T Consensus 182 ~TG~~~~~~~~~~~~~v~~vr~~~~~pv~vG~GI~t~e~~~~~~~gADgvIVGSai~~ 239 (262)
T 2ekc_A 182 TTGAREKLPYERIKKKVEEYRELCDKPVVVGFGVSKKEHAREIGSFADGVVVGSALVK 239 (262)
T ss_dssp ---------CHHHHHHHHHHHHHCCSCEEEESSCCSHHHHHHHHTTSSEEEECHHHHH
T ss_pred ccCCCCCcCcccHHHHHHHHHhhcCCCEEEeCCCCCHHHHHHHHcCCCEEEECHHHHh
Confidence 00 011 137889999999999999999999999999543 26799999875
No 165
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=98.17 E-value=3.2e-05 Score=72.27 Aligned_cols=151 Identities=14% Similarity=0.163 Sum_probs=111.1
Q ss_pred CceEEEecCCCHHHHHHHHHHH-hcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEecc
Q psy4398 102 NKIILQIGTADPERALEAAKKV-EHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIRV 178 (306)
Q Consensus 102 ~p~ivql~g~~~~~~~~aa~~~-~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~ 178 (306)
.|+...+...++++..+.++.. ++||..+-+.+|+. +++.-.+.++++|+.+ +.++.+....
T Consensus 136 v~~~~t~~~~~~~~~~~~a~~~~~~G~~~~K~Kvg~~---------------~~~~d~~~v~avR~~~g~~~~l~vDan~ 200 (377)
T 3my9_A 136 IPLSFSIADPDFDADLERMRAMVPAGHTVFKMKTGVK---------------PHAEELRILETMRGEFGERIDLRLDFNQ 200 (377)
T ss_dssp EEBCEEECCSSHHHHHHHHHHHTTTTCCEEEEECSSS---------------CHHHHHHHHHHHHHHHGGGSEEEEECTT
T ss_pred EEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEccCCC---------------cHHHHHHHHHHHHHHhCCCCeEEEeCCC
Confidence 4555666666787776666554 45999999987752 2444567788888887 5688888888
Q ss_pred CCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhhhhccccC
Q psy4398 179 FHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNCAFLRNHY 258 (306)
Q Consensus 179 g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v~vGrall 258 (306)
+|+.+++.++++.+++.|+++|- ++ ..+.+++..+++++.+++||++...+.+..+++++++.+. .-+
T Consensus 201 ~~~~~~A~~~~~~l~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~----~d~ 268 (377)
T 3my9_A 201 ALTPFGAMKILRDVDAFRPTFIE-------QP-VPRRHLDAMAGFAAALDTPILADESCFDAVDLMEVVRRQA----ADA 268 (377)
T ss_dssp CCCTTTHHHHHHHHHTTCCSCEE-------CC-SCTTCHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHHTC----CSE
T ss_pred CcCHHHHHHHHHHHhhcCCCEEE-------CC-CCccCHHHHHHHHHhCCCCEEECCccCCHHHHHHHHHcCC----CCE
Confidence 89999999999999999998884 22 2345789999999999999999999999999999887532 111
Q ss_pred CCCCc-------hHHHHHHHHHhcCCCC
Q psy4398 259 PVEKL-------PKTILYAHCKYKRFEV 279 (306)
Q Consensus 259 ~~p~~-------~~~~l~~~~~~~g~~~ 279 (306)
-+|.. .-+.+.++.+++|++.
T Consensus 269 v~~k~~~~GGit~~~~i~~~a~~~gi~~ 296 (377)
T 3my9_A 269 ISVKIMKCGGLMKAQSLMAIADTAGLPG 296 (377)
T ss_dssp EECCHHHHTSHHHHHHHHHHHHHHTCCE
T ss_pred EEecccccCCHHHHHHHHHHHHHcCCeE
Confidence 11111 1125566777888773
No 166
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=98.16 E-value=3e-05 Score=67.02 Aligned_cols=121 Identities=15% Similarity=0.134 Sum_probs=83.9
Q ss_pred HHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEecc---CCChHHHHHHHHHH
Q psy4398 116 ALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRV---FHNEADTIALCKRL 192 (306)
Q Consensus 116 ~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~---g~~~~~~~~~a~~l 192 (306)
..++...++.|+|.|++.+. +|.....+.+.+.+-+.++++.++.+ .+|+=+ -.+.++....++..
T Consensus 74 ~~e~~~Ai~~GAdevd~vin----------ig~~~~g~~~~v~~ei~~v~~a~~~~-~lkvIlet~~l~~e~i~~a~~ia 142 (220)
T 1ub3_A 74 ALEAALACARGADEVDMVLH----------LGRAKAGDLDYLEAEVRAVREAVPQA-VLKVILETGYFSPEEIARLAEAA 142 (220)
T ss_dssp HHHHHHHHHTTCSEEEEECC----------HHHHHTTCHHHHHHHHHHHHHHSTTS-EEEEECCGGGSCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEeccc----------chhhhCCCHHHHHHHHHHHHHHHcCC-CceEEEecCCCCHHHHHHHHHHH
Confidence 34444445679999999643 34333456677777778888877433 445221 24667788999999
Q ss_pred HHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhC--CCcEEEecCCCCHHHHHHHHHhhh
Q psy4398 193 EACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHL--KIPVIANGGSKEIVDYGGVFSLNC 251 (306)
Q Consensus 193 ~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~--~ipvia~GGI~s~~~~~~~l~~~v 251 (306)
.++|+|+|-.+-. ...+.+..+.++.+++.+ ++||-++|||+|.+++.++++.|+
T Consensus 143 ~eaGADfVKTsTG----f~~~gat~~dv~~m~~~vg~~v~VkaaGGirt~~~al~~i~aGa 199 (220)
T 1ub3_A 143 IRGGADFLKTSTG----FGPRGASLEDVALLVRVAQGRAQVKAAGGIRDRETALRMLKAGA 199 (220)
T ss_dssp HHHTCSEEECCCS----SSSCCCCHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTTC
T ss_pred HHhCCCEEEeCCC----CCCCCCCHHHHHHHHHhhCCCCeEEEECCCCCHHHHHHHHHCCC
Confidence 9999999975421 112334666666666654 699999999999999999998755
No 167
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=98.14 E-value=3e-05 Score=72.82 Aligned_cols=122 Identities=14% Similarity=0.164 Sum_probs=98.8
Q ss_pred CceEEEec----CCCHHHHHHHHHHHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEE-
Q psy4398 102 NKIILQIG----TADPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVS- 173 (306)
Q Consensus 102 ~p~ivql~----g~~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~- 173 (306)
.|+...++ ..+++++++.++.+. +||..+.+++|+ +++.-.+.++++|+++ ++++.
T Consensus 128 v~~y~t~~~~~~~~~~e~~~~~a~~~~~~G~~~~KiKvG~----------------~~~~d~~~v~avR~a~g~~~~l~~ 191 (391)
T 3gd6_A 128 IKVCYPIFRHRFSEEVESNLDVVRQKLEQGFDVFRLYVGK----------------NLDADEEFLSRVKEEFGSRVRIKS 191 (391)
T ss_dssp EEBCEEECCCSSTTHHHHHHHHHHHHHHTTCCEEEEECSS----------------CHHHHHHHHHHHHHHHGGGCEEEE
T ss_pred EEeeEEecccccCCCHHHHHHHHHHHHHcCCCEEEEeeCC----------------CHHHHHHHHHHHHHHcCCCCcEEE
Confidence 45666776 677888888877664 699999999875 2455577888998887 46788
Q ss_pred EEeccCCChHHHHHHHHHHHHcCC--cEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHh
Q psy4398 174 CKIRVFHNEADTIALCKRLEACGI--IAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSL 249 (306)
Q Consensus 174 vKir~g~~~~~~~~~a~~l~~~G~--d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~ 249 (306)
+....+|+.+++.++++.+++.|+ ++|. ++. .+.+++..+++++.+++|| ...+.+.++++++++.
T Consensus 192 vDan~~~~~~~A~~~~~~l~~~~i~~~~iE-------qP~-~~~d~~~~~~l~~~~~iPI--dE~~~~~~~~~~~~~~ 259 (391)
T 3gd6_A 192 YDFSHLLNWKDAHRAIKRLTKYDLGLEMIE-------SPA-PRNDFDGLYQLRLKTDYPI--SEHVWSFKQQQEMIKK 259 (391)
T ss_dssp EECTTCSCHHHHHHHHHHHTTCCSSCCEEE-------CCS-CTTCHHHHHHHHHHCSSCE--EEECCCHHHHHHHHHH
T ss_pred ecCCCCcCHHHHHHHHHHHHhcCCCcceec-------CCC-ChhhHHHHHHHHHHcCCCc--CCCCCCHHHHHHHHHc
Confidence 888778999999999999999999 7775 222 2457899999999999999 7889999999999875
No 168
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=98.13 E-value=5.5e-05 Score=67.21 Aligned_cols=117 Identities=14% Similarity=0.075 Sum_probs=81.1
Q ss_pred HHhcCCCEEEEcc--CCCccccccCCccccccCChHHHHHHHHHHHhcc---cccEEEEecc-CC------ChHHHHHHH
Q psy4398 122 KVEHDVAAIDINM--GCPKQFSLTGGMGAALLSTPDIACNILTTLISNL---SIPVSCKIRV-FH------NEADTIALC 189 (306)
Q Consensus 122 ~~~~g~d~veln~--gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~---~~pv~vKir~-g~------~~~~~~~~a 189 (306)
.++.|+|.|++.. +. .+.+...+-++++++.+ ++|+++=... |. +.+.....+
T Consensus 101 Ai~~Ga~~v~~~~nig~---------------~~~~~~~~~~~~v~~~~~~~~~~vIi~~~~~G~~~~~~~s~~~i~~a~ 165 (263)
T 1w8s_A 101 AVSLGASAVGYTIYPGS---------------GFEWKMFEELARIKRDAVKFDLPLVVESFPRGGKVVNETAPEIVAYAA 165 (263)
T ss_dssp HHHTTCSEEEEEECTTS---------------TTHHHHHHHHHHHHHHHHHHTCCEEEEECCCSTTCCCTTCHHHHHHHH
T ss_pred HHHCCCCEEEEEEecCC---------------cCHHHHHHHHHHHHHHHHHcCCeEEEEeeCCCCccccCCCHHHHHHHH
Confidence 3456999999854 42 12233344444444333 7787766543 11 445566678
Q ss_pred HHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCC-cEEEecCCC--CHHHHHHHH----Hh---hhhhccccCC
Q psy4398 190 KRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKI-PVIANGGSK--EIVDYGGVF----SL---NCAFLRNHYP 259 (306)
Q Consensus 190 ~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~i-pvia~GGI~--s~~~~~~~l----~~---~v~vGrall~ 259 (306)
+.+.+.|+|+|-+.- |...+.++++++.++. ||++.|||+ |.+++.+.+ +. |+.+||+++.
T Consensus 166 ~~a~~~GAD~vkt~~---------~~~~e~~~~~~~~~~~~pV~asGGi~~~~~~~~l~~i~~~~~aGA~GvsvgraI~~ 236 (263)
T 1w8s_A 166 RIALELGADAMKIKY---------TGDPKTFSWAVKVAGKVPVLMSGGPKTKTEEDFLKQVEGVLEAGALGIAVGRNVWQ 236 (263)
T ss_dssp HHHHHHTCSEEEEEC---------CSSHHHHHHHHHHTTTSCEEEECCSCCSSHHHHHHHHHHHHHTTCCEEEESHHHHT
T ss_pred HHHHHcCCCEEEEcC---------CCCHHHHHHHHHhCCCCeEEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEehhhcC
Confidence 999999999998761 1266889999988877 999999999 888887766 44 4599999988
Q ss_pred CCC
Q psy4398 260 VEK 262 (306)
Q Consensus 260 ~p~ 262 (306)
.|.
T Consensus 237 ~~d 239 (263)
T 1w8s_A 237 RRD 239 (263)
T ss_dssp STT
T ss_pred CcC
Confidence 664
No 169
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=98.11 E-value=3.9e-05 Score=72.15 Aligned_cols=142 Identities=8% Similarity=-0.009 Sum_probs=103.5
Q ss_pred HHHHHHHHH-hcCCCEEEEc-cCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEeccCC-ChHHHHHHH
Q psy4398 115 RALEAAKKV-EHDVAAIDIN-MGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIRVFH-NEADTIALC 189 (306)
Q Consensus 115 ~~~~aa~~~-~~g~d~veln-~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~-~~~~~~~~a 189 (306)
++++.++.+ ++||..+-++ +|.+ ..+++.-.++++++|+++ +.++.+....+| +.+++.+++
T Consensus 155 ~~~~~a~~~~~~G~~~~K~~k~g~~-------------~~~~~~d~~~v~avR~a~G~d~~l~vDan~~~~~~~~A~~~~ 221 (394)
T 3mqt_A 155 AYKPLIAKAKERGAKAVKVCIIPND-------------KVSDKEIVAYLRELREVIGWDMDMMVDCLYRWTDWQKARWTF 221 (394)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCCCT-------------TSCHHHHHHHHHHHHHHHCSSSEEEEECTTCCSCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEecccCCC-------------ccCHHHHHHHHHHHHHHhCCCCeEEEECCCCCCCHHHHHHHH
Confidence 455555544 4599999993 4321 124677788999999987 578888888889 999999999
Q ss_pred HHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhhhhccccCCCC-C----ch
Q psy4398 190 KRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNCAFLRNHYPVE-K----LP 264 (306)
Q Consensus 190 ~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v~vGrall~~p-~----~~ 264 (306)
+.|++.|+++|. ++. .+.+++..+++++.+++||++.+.+.+.++++++++.+. ...+.-++ . ..
T Consensus 222 ~~L~~~~i~~iE-------eP~-~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~--~d~v~~k~~~~GGit~ 291 (394)
T 3mqt_A 222 RQLEDIDLYFIE-------ACL-QHDDLIGHQKLAAAINTRLCGAEMSTTRFEAQEWLEKTG--ISVVQSDYNRCGGVTE 291 (394)
T ss_dssp HHTGGGCCSEEE-------SCS-CTTCHHHHHHHHHHSSSEEEECTTCCHHHHHHHHHHHHC--CSEECCCTTTSSCHHH
T ss_pred HHHhhcCCeEEE-------CCC-CcccHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCC--CCeEecCccccCCHHH
Confidence 999999999985 222 345889999999999999999999999999999987632 00011122 1 12
Q ss_pred HHHHHHHHHhcCCCC
Q psy4398 265 KTILYAHCKYKRFEV 279 (306)
Q Consensus 265 ~~~l~~~~~~~g~~~ 279 (306)
-+.+.+..+++|++.
T Consensus 292 ~~~ia~~A~~~gi~~ 306 (394)
T 3mqt_A 292 LLRIMDICEHHNAQL 306 (394)
T ss_dssp HHHHHHHHHHHTCEE
T ss_pred HHHHHHHHHHcCCEE
Confidence 235667777888773
No 170
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=98.10 E-value=2.1e-05 Score=75.95 Aligned_cols=121 Identities=15% Similarity=0.073 Sum_probs=84.1
Q ss_pred HHHHHH-hcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc-cccEEEEeccCCChHHHHHHHHHHHHc
Q psy4398 118 EAAKKV-EHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL-SIPVSCKIRVFHNEADTIALCKRLEAC 195 (306)
Q Consensus 118 ~aa~~~-~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~g~~~~~~~~~a~~l~~~ 195 (306)
+.++.+ +.|+|.|.++... .+.+...+.++.+++.+ ++|+..+-- .+ .+.++.+.++
T Consensus 236 ~~a~~l~~~G~d~ivi~~a~---------------g~~~~~~~~i~~l~~~~p~~pvi~G~v--~t----~~~a~~~~~~ 294 (491)
T 1zfj_A 236 ERAEALFEAGADAIVIDTAH---------------GHSAGVLRKIAEIRAHFPNRTLIAGNI--AT----AEGARALYDA 294 (491)
T ss_dssp HHHHHHHHHTCSEEEECCSC---------------TTCHHHHHHHHHHHHHCSSSCEEEEEE--CS----HHHHHHHHHT
T ss_pred HHHHHHHHcCCCeEEEeeec---------------CcchhHHHHHHHHHHHCCCCcEeCCCc--cC----HHHHHHHHHc
Confidence 334444 4599999997421 12345567888888888 788875432 22 3667788899
Q ss_pred CCcEEEEccc------C--CCCCCCCCCcHHHHHHHHh---hCCCcEEEecCCCCHHHHHHHHHhhh---hhccccCCCC
Q psy4398 196 GIIAIGVHGR------T--KAERPRHRNRIEMIRTLTQ---HLKIPVIANGGSKEIVDYGGVFSLNC---AFLRNHYPVE 261 (306)
Q Consensus 196 G~d~i~v~~~------~--~~~~~~~p~~~~~v~~i~~---~~~ipvia~GGI~s~~~~~~~l~~~v---~vGrall~~p 261 (306)
|+|+|.+... + .. .. +.+.++.+.++.+ ..++|||+.|||++..|+.++++.|+ ++||+++..+
T Consensus 295 Gad~I~vg~g~g~~~~tr~~~-~~-~~p~~~~l~~~~~~~~~~~ipvia~GGi~~~~di~kal~~GA~~v~vG~~~~~~~ 372 (491)
T 1zfj_A 295 GVDVVKVGIGPGSICTTRVVA-GV-GVPQVTAIYDAAAVAREYGKTIIADGGIKYSGDIVKALAAGGNAVMLGSMFAGTD 372 (491)
T ss_dssp TCSEEEECSSCCTTBCHHHHT-CC-CCCHHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTBS
T ss_pred CCCEEEECccCCcceEEeeec-CC-CCCcHHHHHHHHHHHhhcCCCEEeeCCCCCHHHHHHHHHcCCcceeeCHHhhCCC
Confidence 9999988421 0 11 11 2236666666665 46899999999999999999998754 9999998643
No 171
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=98.09 E-value=5.6e-05 Score=70.32 Aligned_cols=152 Identities=12% Similarity=0.144 Sum_probs=111.2
Q ss_pred CceEEEecCCCHHHHHHHHHHH-hc-CCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEec
Q psy4398 102 NKIILQIGTADPERALEAAKKV-EH-DVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIR 177 (306)
Q Consensus 102 ~p~ivql~g~~~~~~~~aa~~~-~~-g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir 177 (306)
.|+...++..+++++.+.++.+ ++ ||..+-+.+|... .+.-.+.++++|+.+ +.++.+...
T Consensus 129 v~~~~~~~~~~~~~~~~~a~~~~~~~G~~~~K~K~g~~~---------------~~~d~~~v~avR~a~g~~~~l~vDan 193 (367)
T 3dg3_A 129 MRVSHMLGFDDPVKMVAEAERIRETYGINTFKVKVGRRP---------------VQLDTAVVRALRERFGDAIELYVDGN 193 (367)
T ss_dssp EEEEEEEESSCHHHHHHHHHHHHHHHCCCEEEEECCCSS---------------THHHHHHHHHHHHHHGGGSEEEEECT
T ss_pred EEEEEEecCCCHHHHHHHHHHHHHhcCccEEEEeeCCCh---------------hhhHHHHHHHHHHHhCCCCEEEEECC
Confidence 4566667777898888777654 67 9999999876511 113356788888887 467888888
Q ss_pred cCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhh----hh
Q psy4398 178 VFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNC----AF 253 (306)
Q Consensus 178 ~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v----~v 253 (306)
.+|+.+++.++++.+++.|+++|. ++ ..+.+++..+++++.+++||++.+.+.+.++++++++.+. ++
T Consensus 194 ~~~~~~~a~~~~~~l~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~ 265 (367)
T 3dg3_A 194 RGWSAAESLRAMREMADLDLLFAE-------EL-CPADDVLSRRRLVGQLDMPFIADESVPTPADVTREVLGGSATAISI 265 (367)
T ss_dssp TCSCHHHHHHHHHHTTTSCCSCEE-------SC-SCTTSHHHHHHHHHHCSSCEEECTTCSSHHHHHHHHHHTSCSEEEE
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEE-------CC-CCcccHHHHHHHHHhCCCCEEecCCcCCHHHHHHHHHcCCCCEEEe
Confidence 889999999999999999998885 22 2345788999999999999999999999999999988632 11
Q ss_pred ccccCCCCCchHHHHHHHHHhcCCC
Q psy4398 254 LRNHYPVEKLPKTILYAHCKYKRFE 278 (306)
Q Consensus 254 Grall~~p~~~~~~l~~~~~~~g~~ 278 (306)
=-.-. + ...-+.+.++.+++|++
T Consensus 266 k~~~~-G-it~~~~ia~~A~~~gi~ 288 (367)
T 3dg3_A 266 KTART-G-FTGSTRVHHLAEGLGLD 288 (367)
T ss_dssp CHHHH-T-THHHHHHHHHHHHHTCE
T ss_pred ehhhh-h-HHHHHHHHHHHHHcCCe
Confidence 00000 1 01123566778888887
No 172
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=98.09 E-value=1.2e-05 Score=70.01 Aligned_cols=152 Identities=15% Similarity=0.093 Sum_probs=101.2
Q ss_pred ceEEEecCCCHHHHHHHHHHHhc-CCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEeccCCC
Q psy4398 103 KIILQIGTADPERALEAAKKVEH-DVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFHN 181 (306)
Q Consensus 103 p~ivql~g~~~~~~~~aa~~~~~-g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~ 181 (306)
.++.+|...+...+.+..+.+.+ |+|.+++-.- | |. +..+..+-.++++++|+.++.|+.+-+=. .+
T Consensus 6 ~i~psila~D~~~l~~~i~~~~~~Gad~ihldi~--------D--G~-fvp~~~~g~~~v~~lr~~~~~~~~vhlmv-~d 73 (230)
T 1tqj_A 6 VVAPSILSADFSRLGEEIKAVDEAGADWIHVDVM--------D--GR-FVPNITIGPLIVDAIRPLTKKTLDVHLMI-VE 73 (230)
T ss_dssp EEEEBGGGSCGGGHHHHHHHHHHTTCSEEEEEEE--------B--SS-SSSCBCBCHHHHHHHGGGCCSEEEEEEES-SS
T ss_pred EEEEEeeecCHhHHHHHHHHHHHcCCCEEEEEEE--------e--cC-CCcchhhhHHHHHHHHhhcCCcEEEEEEc-cC
Confidence 36778888888888888888765 8999888641 1 11 11122222378888888877787755543 23
Q ss_pred hHHHHHHHHHHHHcCCcEEEEccc--CC---------------------------------------------CCCC---
Q psy4398 182 EADTIALCKRLEACGIIAIGVHGR--TK---------------------------------------------AERP--- 211 (306)
Q Consensus 182 ~~~~~~~a~~l~~~G~d~i~v~~~--~~---------------------------------------------~~~~--- 211 (306)
+ .++++.+.++|+|++++|.- .. .+.+
T Consensus 74 p---~~~i~~~~~aGadgv~vh~e~~~~~~~~~~~~~i~~~g~~~gv~~~p~t~~e~~~~~~~~~D~v~~msv~pg~ggq 150 (230)
T 1tqj_A 74 P---EKYVEDFAKAGADIISVHVEHNASPHLHRTLCQIRELGKKAGAVLNPSTPLDFLEYVLPVCDLILIMSVNPGFGGQ 150 (230)
T ss_dssp G---GGTHHHHHHHTCSEEEEECSTTTCTTHHHHHHHHHHTTCEEEEEECTTCCGGGGTTTGGGCSEEEEESSCC----C
T ss_pred H---HHHHHHHHHcCCCEEEECcccccchhHHHHHHHHHHcCCcEEEEEeCCCcHHHHHHHHhcCCEEEEEEeccccCCc
Confidence 3 23556777788888888765 20 0000
Q ss_pred -CCCCcHHHHHHHHhhC-----CCcEEEecCCCCHHHHHHHHHhh---hhhccccCCCCCchHHHHHHH
Q psy4398 212 -RHRNRIEMIRTLTQHL-----KIPVIANGGSKEIVDYGGVFSLN---CAFLRNHYPVEKLPKTILYAH 271 (306)
Q Consensus 212 -~~p~~~~~v~~i~~~~-----~ipvia~GGI~s~~~~~~~l~~~---v~vGrall~~p~~~~~~l~~~ 271 (306)
..+..++.++++++.+ ++||.+-|||+. +++.++.+.| +.+||+++..+. ++..++++
T Consensus 151 ~~~~~~~~~i~~lr~~~~~~~~~~~I~v~GGI~~-~~~~~~~~aGad~vvvGSai~~a~d-~~~~~~~l 217 (230)
T 1tqj_A 151 SFIPEVLPKIRALRQMCDERGLDPWIEVDGGLKP-NNTWQVLEAGANAIVAGSAVFNAPN-YAEAIAGV 217 (230)
T ss_dssp CCCGGGHHHHHHHHHHHHHHTCCCEEEEESSCCT-TTTHHHHHHTCCEEEESHHHHTSSC-HHHHHHHH
T ss_pred cCcHHHHHHHHHHHHHHHhcCCCCcEEEECCcCH-HHHHHHHHcCCCEEEECHHHHCCCC-HHHHHHHH
Confidence 1123478888888887 899999999997 8888888865 499999997554 34444444
No 173
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=98.09 E-value=2.1e-05 Score=70.27 Aligned_cols=141 Identities=11% Similarity=0.084 Sum_probs=91.3
Q ss_pred CHHHHHHHHHHHhcCCCEEEEccCCCccccccCCcccccc----------CChHHHHHHHHHHHhcccccEEEEeccCCC
Q psy4398 112 DPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALL----------STPDIACNILTTLISNLSIPVSCKIRVFHN 181 (306)
Q Consensus 112 ~~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~----------~~~~~~~eiv~~v~~~~~~pv~vKir~g~~ 181 (306)
+.+...+.++.+.+++|.|||.+. ......| |..+. -+.+.+.++++++|+.+++|+.+=.. ++
T Consensus 28 ~~~~~~~~~~~l~~~aD~IElG~P--fsdP~ad--Gp~Iq~a~~~Al~~G~~~~~~~~~v~~ir~~~~~Pii~m~y--~n 101 (271)
T 1ujp_A 28 SREGFLQAVEEVLPYADLLEIGLP--YSDPLGD--GPVIQRASELALRKGMSVQGALELVREVRALTEKPLFLMTY--LN 101 (271)
T ss_dssp CHHHHHHHHHHHGGGCSSEEEECC--CCC------CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCCSCEEEECC--HH
T ss_pred ChHHHHHHHHHHHhcCCEEEECCC--CCCcccc--cHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCEEEEec--Cc
Confidence 456777777766655999999643 2211111 11111 25566788999999888899887311 22
Q ss_pred hH---HHHHHHHHHHHcCCcEEEEcccC--------------------------C----------CCC---------CCC
Q psy4398 182 EA---DTIALCKRLEACGIIAIGVHGRT--------------------------K----------AER---------PRH 213 (306)
Q Consensus 182 ~~---~~~~~a~~l~~~G~d~i~v~~~~--------------------------~----------~~~---------~~~ 213 (306)
+- ...++++.+.++|+|++++-+-+ . ... +.+
T Consensus 102 ~v~~~g~~~f~~~~~~aG~dGviv~Dl~~ee~~~~~~~~~~~gl~~i~liap~s~~eri~~ia~~~~gfiy~vs~~G~TG 181 (271)
T 1ujp_A 102 PVLAWGPERFFGLFKQAGATGVILPDLPPDEDPGLVRLAQEIGLETVFLLAPTSTDARIATVVRHATGFVYAVSVTGVTG 181 (271)
T ss_dssp HHHHHCHHHHHHHHHHHTCCEEECTTCCGGGCHHHHHHHHHHTCEEECEECTTCCHHHHHHHHTTCCSCEEEECC-----
T ss_pred HHHHhhHHHHHHHHHHcCCCEEEecCCCHHHHHHHHHHHHHcCCceEEEeCCCCCHHHHHHHHHhCCCCEEEEecCcccC
Confidence 11 24677777888888877642210 0 000 011
Q ss_pred ------CCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHh--hhhhccccCC
Q psy4398 214 ------RNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSL--NCAFLRNHYP 259 (306)
Q Consensus 214 ------p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~--~v~vGrall~ 259 (306)
+...++++++++.+++||++.|||+|++++.++ .. ++.+|+++.+
T Consensus 182 ~~~~~~~~~~~~v~~vr~~~~~Pv~vGfGI~t~e~a~~~-~~ADgVIVGSAi~~ 234 (271)
T 1ujp_A 182 MRERLPEEVKDLVRRIKARTALPVAVGFGVSGKATAAQA-AVADGVVVGSALVR 234 (271)
T ss_dssp -------CCHHHHHHHHTTCCSCEEEESCCCSHHHHHHH-TTSSEEEECHHHHH
T ss_pred CCCCCCccHHHHHHHHHhhcCCCEEEEcCCCCHHHHHHh-cCCCEEEEChHHhc
Confidence 123578999999999999999999999999997 42 6799999874
No 174
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=98.09 E-value=2.3e-06 Score=74.72 Aligned_cols=81 Identities=20% Similarity=0.312 Sum_probs=66.3
Q ss_pred HHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhh---hhccccCC
Q psy4398 183 ADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNC---AFLRNHYP 259 (306)
Q Consensus 183 ~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v---~vGrall~ 259 (306)
++..++++.++++|+|+|+++...... +..+..++.++++++.+++|++++|||.++++++++++.++ .+|++++.
T Consensus 33 ~~~~~~a~~~~~~G~d~i~v~~~~~~~-~~~~~~~~~i~~i~~~~~ipvi~~g~i~~~~~~~~~~~~Gad~V~i~~~~~~ 111 (253)
T 1h5y_A 33 GDPVEMAVRYEEEGADEIAILDITAAP-EGRATFIDSVKRVAEAVSIPVLVGGGVRSLEDATTLFRAGADKVSVNTAAVR 111 (253)
T ss_dssp ECHHHHHHHHHHTTCSCEEEEECCCCT-TTHHHHHHHHHHHHHHCSSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHH
T ss_pred ccHHHHHHHHHHcCCCEEEEEeCCccc-cCCcccHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCCEEEEChHHhh
Confidence 358899999999999999998765432 12234678899999999999999999999999999988754 88999888
Q ss_pred CCCch
Q psy4398 260 VEKLP 264 (306)
Q Consensus 260 ~p~~~ 264 (306)
+|.+.
T Consensus 112 ~~~~~ 116 (253)
T 1h5y_A 112 NPQLV 116 (253)
T ss_dssp CTHHH
T ss_pred CcHHH
Confidence 88543
No 175
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=98.08 E-value=8.7e-06 Score=72.11 Aligned_cols=75 Identities=17% Similarity=0.150 Sum_probs=63.9
Q ss_pred HHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhh---hhhccccC
Q psy4398 183 ADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLN---CAFLRNHY 258 (306)
Q Consensus 183 ~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~---v~vGrall 258 (306)
.+..++++.++++|++.|.+++....+...+ .+++.++++++.+++||++.|||+++++++++++.+ +.+|++++
T Consensus 30 ~~~~~~a~~~~~~Ga~~i~v~d~~~~~~~~g-~~~~~i~~i~~~~~iPvi~~ggi~~~~~i~~~~~~Gad~v~lg~~~~ 107 (266)
T 2w6r_A 30 ILLRDWVVEVEKRGAGEILLTSIDRDGTKSG-YDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAGADKALAASVFH 107 (266)
T ss_dssp EEHHHHHHHHHHHTCSEEEEEETTTSSCSSC-CCHHHHHHHGGGCCSCEEEESCCCSTHHHHHHHHHTCSEEECCCCC-
T ss_pred CCHHHHHHHHHHCCCCEEEEEecCcccCCCc-ccHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCcHhhhhHHHH
Confidence 3589999999999999999987765544444 478999999999999999999999999999998875 48999988
No 176
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=98.08 E-value=7.2e-05 Score=64.85 Aligned_cols=52 Identities=13% Similarity=0.039 Sum_probs=44.6
Q ss_pred CcHHHHHHHHhhC-CCcEEEecCCCCHHHHHHHHHh--hhhhccccCCCCCchHH
Q psy4398 215 NRIEMIRTLTQHL-KIPVIANGGSKEIVDYGGVFSL--NCAFLRNHYPVEKLPKT 266 (306)
Q Consensus 215 ~~~~~v~~i~~~~-~ipvia~GGI~s~~~~~~~l~~--~v~vGrall~~p~~~~~ 266 (306)
.+.++++++++.+ ++|++..|||+|++++++++.- ++.+|+++.+||.+.+.
T Consensus 166 ~~~~~i~~i~~~~~~~Pv~vGGGI~t~e~a~~~~~gAD~VVVGSa~v~~p~~~~~ 220 (228)
T 3vzx_A 166 GDIEAVKKTKAVLETSTLFYGGGIKDAETAKQYAEHADVIVVGNAVYEDFDRALK 220 (228)
T ss_dssp CCHHHHHHHHHHCSSSEEEEESSCCSHHHHHHHHTTCSEEEECTHHHHCHHHHHH
T ss_pred CCHHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHHhCCCEEEEChHHhcCHHHHHH
Confidence 3789999999999 8999999999999999999841 45999999998855444
No 177
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=98.07 E-value=5.9e-05 Score=71.26 Aligned_cols=159 Identities=12% Similarity=0.101 Sum_probs=109.4
Q ss_pred CCHHHHHHHHHHHh-cCCCEEEEccCCCccccc---cCCcc----ccccC---ChHHHHHHHHHHHhcc--cccEEEEec
Q psy4398 111 ADPERALEAAKKVE-HDVAAIDINMGCPKQFSL---TGGMG----AALLS---TPDIACNILTTLISNL--SIPVSCKIR 177 (306)
Q Consensus 111 ~~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~---~~~~G----~~l~~---~~~~~~eiv~~v~~~~--~~pv~vKir 177 (306)
.+++++++.++.+. +||..+-+.++.+..... +.+.+ ..... ..+...++++++|+++ ++++.+...
T Consensus 142 ~~~e~~~~~a~~~~~~Gf~~iKlKv~~~~~~~~~~~~pG~~~~~~~~~~~~~~~~~~~~e~v~avR~avG~d~~l~vDaN 221 (409)
T 3go2_A 142 TDLDGVKRTAEEARERQFRAIKTNIFIHDDGPLHAWRPGFAVPFQPALNVDRKVLRNLRAHLEALRDGAGPDVEILLDLN 221 (409)
T ss_dssp CSHHHHHHHHHHHHHTTCCEEEECCEECSSSSCEECBGGGTBSCCTTCCCCHHHHHHHHHHHHHHHHHHCTTSEEEEECT
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcccccccccccccccCCCccCCcccccchHHHHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 36888888877664 699999998742211000 00111 00101 2456788999999987 578888888
Q ss_pred cCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhh-hh-cc
Q psy4398 178 VFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNC-AF-LR 255 (306)
Q Consensus 178 ~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v-~v-Gr 255 (306)
.+|+.+++.++++.|++.|+++|.. + +.+++..+++++.+++||++.+.+.+.++++++++.+. .+ --
T Consensus 222 ~~~~~~~A~~~~~~L~~~~i~~iE~-------P---~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~ 291 (409)
T 3go2_A 222 FNAKPEGYLKILRELADFDLFWVEI-------D---SYSPQGLAYVRNHSPHPISSCETLFGIREFKPFFDANAVDVAIV 291 (409)
T ss_dssp TCSCHHHHHHHHHHTTTSCCSEEEC-------C---CSCHHHHHHHHHTCSSCEEECTTCCHHHHHHHHHHTTCCSEEEE
T ss_pred CCCCHHHHHHHHHHHhhcCCeEEEe-------C---cCCHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCCEEEe
Confidence 8899999999999999999999972 1 24788999999999999999999999999999988532 00 00
Q ss_pred ccCCCCCchHHHHHHHHHhcCCCC
Q psy4398 256 NHYPVEKLPKTILYAHCKYKRFEV 279 (306)
Q Consensus 256 all~~p~~~~~~l~~~~~~~g~~~ 279 (306)
-+-++-...-+.+.+..+++|++.
T Consensus 292 k~~~GGit~~~~ia~~A~~~gi~~ 315 (409)
T 3go2_A 292 DTIWNGVWQSMKIAAFADAHDINV 315 (409)
T ss_dssp CHHHHCHHHHHHHHHHHHHTTCEE
T ss_pred CCCCCCHHHHHHHHHHHHHcCCEE
Confidence 000000112235667777888773
No 178
>3tcs_A Racemase, putative; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, TIM barrel; HET: PG4; 1.88A {Roseobacter denitrificans} PDB: 3u4f_A 3t9p_A 3t8q_A
Probab=98.07 E-value=0.00012 Score=68.77 Aligned_cols=149 Identities=12% Similarity=0.122 Sum_probs=108.2
Q ss_pred CHHHHHHHHH-HH-hcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEeccCCChHHHHH
Q psy4398 112 DPERALEAAK-KV-EHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIRVFHNEADTIA 187 (306)
Q Consensus 112 ~~~~~~~aa~-~~-~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~ 187 (306)
++++..+.+. .. ++||..+-+.+|.+.. ......++...+.++++|+++ ++++.+....+|+.+++.+
T Consensus 146 ~~~~~~~~~~~~~~~~Gf~~~K~KvG~~~~--------~d~~~~~~~~~~~v~avReavG~d~~l~vDaN~~~~~~~A~~ 217 (388)
T 3tcs_A 146 TPRDEAERLKRLRDTQGFTAFKVRAGAEVG--------RNRDEWPGRTEEIIPTMRRELGDDVDLLIDANSCYTPDRAIE 217 (388)
T ss_dssp CHHHHHHHHHHHHHHHCCCEEEEECSCTTC--------TTCCSSTTHHHHHHHHHHHHHCSSSEEEEECTTCCCHHHHHH
T ss_pred ChHHHHHHHHHHHHhcCCCEEEEccCCCcc--------cccccchhHHHHHHHHHHHHhCCCCeEEEeCCCCcCHHHHHH
Confidence 5665555443 33 4599999999987541 112233566778899999987 5688888888999999999
Q ss_pred HHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhhhhccccCCCCCchH--
Q psy4398 188 LCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNCAFLRNHYPVEKLPK-- 265 (306)
Q Consensus 188 ~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v~vGrall~~p~~~~-- 265 (306)
+++.+++.|+.+|- ++ ..+.+++..+++++.+++||.+...+.+..+++++++.+. .-+-+|...+
T Consensus 218 ~~~~l~~~~i~~iE-------eP-~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a----~d~v~~d~~~~G 285 (388)
T 3tcs_A 218 VGHMLQDHGFCHFE-------EP-CPYWELAQTKQVTDALDIDVTGGEQDCDLPTWQRMIDMRA----VDIVQPDILYLG 285 (388)
T ss_dssp HHHHHHHTTCCEEE-------CC-SCTTCHHHHHHHHHHCSSCEEECTTCCCHHHHHHHHHHTC----CSEECCCHHHHT
T ss_pred HHHHHhhcCCeEEE-------CC-CCccCHHHHHHHHHhcCCCEEcCCccCCHHHHHHHHHcCC----CCEEEeCccccC
Confidence 99999999998883 22 2345889999999999999999999999999999987532 1112222221
Q ss_pred -----HHHHHHHHhcCCCCC
Q psy4398 266 -----TILYAHCKYKRFEVP 280 (306)
Q Consensus 266 -----~~l~~~~~~~g~~~~ 280 (306)
+.+.+..+++|++..
T Consensus 286 Git~a~kia~~A~~~gv~~~ 305 (388)
T 3tcs_A 286 GICRTLRVVEMARAAGLPVT 305 (388)
T ss_dssp SHHHHHHHHHHHHHTTCCBC
T ss_pred CHHHHHHHHHHHHHcCCEEE
Confidence 256677788888743
No 179
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=98.06 E-value=0.0001 Score=69.01 Aligned_cols=151 Identities=9% Similarity=0.049 Sum_probs=110.8
Q ss_pred CceEEEecCCCHHHHHHHHHHH-hcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc-cccEEEEeccC
Q psy4398 102 NKIILQIGTADPERALEAAKKV-EHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL-SIPVSCKIRVF 179 (306)
Q Consensus 102 ~p~ivql~g~~~~~~~~aa~~~-~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~g 179 (306)
.|+...+...++++..+.++.+ ++||..+-+.+|.. +++.-.+.++++|+.+ +.++.+....+
T Consensus 138 v~~~~t~~~~~~~~~~~~a~~~~~~G~~~~K~Kvg~~---------------~~~~d~~~v~avR~a~~~~~l~vDan~~ 202 (385)
T 3i6e_A 138 IPLSCSIANPDFDADIALMERLRADGVGLIKLKTGFR---------------DHAFDIMRLELIARDFPEFRVRVDYNQG 202 (385)
T ss_dssp EEBEEEECCSSHHHHHHHHHHHHHHTCCEEEEECSSS---------------CHHHHHHHHHHHHHHCTTSEEEEECTTC
T ss_pred eEEEEEcCCCCHHHHHHHHHHHHHcCCCEEEEecCCC---------------CHHHHHHHHHHHHHhCCCCeEEEECCCC
Confidence 4566677667787776655544 56999999987642 2444567788888887 56788888888
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhhhhccccCC
Q psy4398 180 HNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNCAFLRNHYP 259 (306)
Q Consensus 180 ~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v~vGrall~ 259 (306)
|+.+++.++++.+++.|+++|- ++. .+.+++..+++++.+++||++...+.+..+++++++.+. .-+-
T Consensus 203 ~~~~~A~~~~~~L~~~~i~~iE-------qP~-~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~----~d~v 270 (385)
T 3i6e_A 203 LEIDEAVPRVLDVAQFQPDFIE-------QPV-RAHHFELMARLRGLTDVPLLADESVYGPEDMVRAAHEGI----CDGV 270 (385)
T ss_dssp CCGGGHHHHHHHHHTTCCSCEE-------CCS-CTTCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHHTC----CSEE
T ss_pred CCHHHHHHHHHHHHhcCCCEEE-------CCC-CcccHHHHHHHHHhCCCCEEEeCCcCCHHHHHHHHHcCC----CCEE
Confidence 9999999999999999998884 222 345889999999999999999999999999999887532 1011
Q ss_pred CCCc-------hHHHHHHHHHhcCCCC
Q psy4398 260 VEKL-------PKTILYAHCKYKRFEV 279 (306)
Q Consensus 260 ~p~~-------~~~~l~~~~~~~g~~~ 279 (306)
+|.. .-+.+.++.+++|++.
T Consensus 271 ~~k~~~~GGit~~~~i~~~A~~~gi~~ 297 (385)
T 3i6e_A 271 SIKIMKSGGLTRAQTVARIAAAHGLMA 297 (385)
T ss_dssp EECHHHHTSHHHHHHHHHHHHHTTCEE
T ss_pred EecccccCCHHHHHHHHHHHHHcCCEE
Confidence 1111 1125667777888773
No 180
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=98.06 E-value=1.1e-05 Score=69.25 Aligned_cols=150 Identities=11% Similarity=0.160 Sum_probs=90.9
Q ss_pred eEEEecCCCHHHHHHHHHHHhc-CCCEEEEcc--CC-CccccccCCccccccCChHHHHHHHHHHHhcccccEEEEeccC
Q psy4398 104 IILQIGTADPERALEAAKKVEH-DVAAIDINM--GC-PKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVF 179 (306)
Q Consensus 104 ~ivql~g~~~~~~~~aa~~~~~-g~d~veln~--gc-P~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g 179 (306)
+..+|...+..++.+.++.+.+ |+|.+.+-. ++ +. ....-.++++++++.++.|+.+-+-..
T Consensus 6 ~~~~i~a~D~~~~~~~~~~~~~~G~~~i~~~~~dg~~~~--------------~~~~g~~~i~~i~~~~~~~~~v~l~v~ 71 (220)
T 2fli_A 6 IAPSILAADYANFASELARIEETDAEYVHIDIMDGQFVP--------------NISFGADVVASMRKHSKLVFDCHLMVV 71 (220)
T ss_dssp EEEBGGGSCGGGHHHHHHHHHHTTCCEEEEEEEBSSSSS--------------CBCBCHHHHHHHHTTCCSEEEEEEESS
T ss_pred EEEEEEeCCHHHHHHHHHHHHHcCCCEEEEEeecCCCCC--------------ccccCHHHHHHHHHhCCCCEEEEEeec
Confidence 5556777888888888888765 899977753 22 11 111113556667776666665544321
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEcccCC---------------------------------------------CCCCCC-
Q psy4398 180 HNEADTIALCKRLEACGIIAIGVHGRTK---------------------------------------------AERPRH- 213 (306)
Q Consensus 180 ~~~~~~~~~a~~l~~~G~d~i~v~~~~~---------------------------------------------~~~~~~- 213 (306)
+.++ .++.+.++|+|.+++|+... ...+.+
T Consensus 72 -d~~~---~i~~~~~~gad~v~vh~~~~~~~~~~~~~~~~~g~~i~~~~~~~t~~e~~~~~~~~~d~vl~~~~~~g~~g~ 147 (220)
T 2fli_A 72 -DPER---YVEAFAQAGADIMTIHTESTRHIHGALQKIKAAGMKAGVVINPGTPATALEPLLDLVDQVLIMTVNPGFGGQ 147 (220)
T ss_dssp -SGGG---GHHHHHHHTCSEEEEEGGGCSCHHHHHHHHHHTTSEEEEEECTTSCGGGGGGGTTTCSEEEEESSCTTCSSC
T ss_pred -CHHH---HHHHHHHcCCCEEEEccCccccHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHhhCCEEEEEEECCCCccc
Confidence 2222 33666777888887764210 000111
Q ss_pred ---CCcHHHHHHHHhhC-----CCcEEEecCCCCHHHHHHHHHh---hhhhccccCCCCCchHHHHHHHHH
Q psy4398 214 ---RNRIEMIRTLTQHL-----KIPVIANGGSKEIVDYGGVFSL---NCAFLRNHYPVEKLPKTILYAHCK 273 (306)
Q Consensus 214 ---p~~~~~v~~i~~~~-----~ipvia~GGI~s~~~~~~~l~~---~v~vGrall~~p~~~~~~l~~~~~ 273 (306)
+..++.++++++.+ ++|+++.|||+ ++++.++++. ++.+||+++..+. ++..++++.+
T Consensus 148 ~~~~~~~~~i~~~~~~~~~~~~~~~i~v~GGI~-~~~~~~~~~~Gad~vvvGsai~~~~d-~~~a~~~~~~ 216 (220)
T 2fli_A 148 AFIPECLEKVATVAKWRDEKGLSFDIEVDGGVD-NKTIRACYEAGANVFVAGSYLFKASD-LVSQVQTLRT 216 (220)
T ss_dssp CCCGGGHHHHHHHHHHHHHTTCCCEEEEESSCC-TTTHHHHHHHTCCEEEESHHHHTSSC-HHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHHhcCCCceEEEECcCC-HHHHHHHHHcCCCEEEEChHHhCCCC-HHHHHHHHHH
Confidence 11235566666655 79999999999 7888888776 4599999997644 4444444443
No 181
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=98.06 E-value=3.1e-05 Score=67.16 Aligned_cols=149 Identities=13% Similarity=0.086 Sum_probs=96.3
Q ss_pred ceEEEecCCCHHHHHHHHHHHhc-CCCEEEEccC----CCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEec
Q psy4398 103 KIILQIGTADPERALEAAKKVEH-DVAAIDINMG----CPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIR 177 (306)
Q Consensus 103 p~ivql~g~~~~~~~~aa~~~~~-g~d~veln~g----cP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir 177 (306)
.++..|...+++++.+.++.+.+ |+|.|++.+. .|+ .....++++++++.++.|+.+-+-
T Consensus 12 ~i~p~i~a~d~~~~~~~i~~~~~~G~d~i~l~~~dg~f~~~---------------~~~~~~~i~~l~~~~~~~~~v~l~ 76 (230)
T 1rpx_A 12 IVSPSILSANFSKLGEQVKAIEQAGCDWIHVDVMDGRFVPN---------------ITIGPLVVDSLRPITDLPLDVHLM 76 (230)
T ss_dssp EEEEBGGGSCGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSC---------------BCCCHHHHHHHGGGCCSCEEEEEE
T ss_pred EEEEEeecCCHHHHHHHHHHHHHCCCCEEEEeeccCCcccc---------------cccCHHHHHHHHhccCCcEEEEEE
Confidence 35667778888888888887765 9999988641 121 111136677788776667666554
Q ss_pred cCCChHHHHHHHHHHHHcCCcEEEEccc--CC---------------------------------------------CCC
Q psy4398 178 VFHNEADTIALCKRLEACGIIAIGVHGR--TK---------------------------------------------AER 210 (306)
Q Consensus 178 ~g~~~~~~~~~a~~l~~~G~d~i~v~~~--~~---------------------------------------------~~~ 210 (306)
. +. ..+.++.+.++|+|+|++|+. .. ...
T Consensus 77 v--nd--~~~~v~~~~~~Gad~v~vh~~~~~~~~~~~~~~~~~~~g~~ig~~~~p~t~~e~~~~~~~~~d~vl~~~~~pg 152 (230)
T 1rpx_A 77 I--VE--PDQRVPDFIKAGADIVSVHCEQSSTIHLHRTINQIKSLGAKAGVVLNPGTPLTAIEYVLDAVDLVLIMSVNPG 152 (230)
T ss_dssp S--SS--HHHHHHHHHHTTCSEEEEECSTTTCSCHHHHHHHHHHTTSEEEEEECTTCCGGGGTTTTTTCSEEEEESSCTT
T ss_pred e--cC--HHHHHHHHHHcCCCEEEEEecCccchhHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHhhCCEEEEEEEcCC
Confidence 2 21 335666677789999888765 20 000
Q ss_pred CCC----CCcHHHHHHHHhhC-----CCcEEEecCCCCHHHHHHHHHh---hhhhccccCCCCCchHHHHHHHH
Q psy4398 211 PRH----RNRIEMIRTLTQHL-----KIPVIANGGSKEIVDYGGVFSL---NCAFLRNHYPVEKLPKTILYAHC 272 (306)
Q Consensus 211 ~~~----p~~~~~v~~i~~~~-----~ipvia~GGI~s~~~~~~~l~~---~v~vGrall~~p~~~~~~l~~~~ 272 (306)
+.+ +..++.++++++.+ ++|+++.|||+ ++++.++++. ++.+||+++..+. +...++++.
T Consensus 153 ~~g~~~~~~~~~~i~~l~~~~~~~~~~~pi~v~GGI~-~~n~~~~~~aGad~vvvgSaI~~a~d-p~~a~~~l~ 224 (230)
T 1rpx_A 153 FGGQSFIESQVKKISDLRKICAERGLNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVFGAPD-YAEAIKGIK 224 (230)
T ss_dssp CSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEEESSCC-TTTHHHHHHHTCCEEEESHHHHTSSC-HHHHHHHHH
T ss_pred CCCccccHHHHHHHHHHHHHHHhcCCCceEEEECCCC-HHHHHHHHHcCCCEEEEChhhhCCCC-HHHHHHHHH
Confidence 111 11245667777766 79999999998 7888887776 4599999986444 444444543
No 182
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=98.04 E-value=7.1e-05 Score=70.32 Aligned_cols=142 Identities=8% Similarity=-0.037 Sum_probs=103.3
Q ss_pred HHHHHHHHH-hcCCCEEEE-ccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEeccCC-ChHHHHHHH
Q psy4398 115 RALEAAKKV-EHDVAAIDI-NMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIRVFH-NEADTIALC 189 (306)
Q Consensus 115 ~~~~aa~~~-~~g~d~vel-n~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~-~~~~~~~~a 189 (306)
++++.++.+ ++||..+-+ -+|.+ ..+++.-.++++++|+.+ ++++.+....+| +.+++.+++
T Consensus 160 ~~~~~a~~~~~~G~~~~K~~k~g~~-------------~~~~~~d~e~v~avR~a~G~d~~l~vDaN~~~~~~~~A~~~~ 226 (394)
T 3mkc_A 160 GYAPLLEKAKAHNIRAVKVCVPIKA-------------DWSTKEVAYYLRELRGILGHDTDMMVDYLYRFTDWYEVARLL 226 (394)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCTTC-------------CCCHHHHHHHHHHHHHHHCSSSEEEEECTTCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEeCccCCC-------------ccCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCCCHHHHHHHH
Confidence 455555544 459999999 34421 124667788899999988 568888888889 999999999
Q ss_pred HHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhhhhccccCCCC-Cch----
Q psy4398 190 KRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNCAFLRNHYPVE-KLP---- 264 (306)
Q Consensus 190 ~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v~vGrall~~p-~~~---- 264 (306)
+.|++.|+++|. ++. .+.+++..+++++.+++||++.+.+.+.++++++++.+. ...+.-++ .+.
T Consensus 227 ~~L~~~~i~~iE-------eP~-~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~--~d~v~~k~~~~GGit~ 296 (394)
T 3mkc_A 227 NSIEDLELYFAE-------ATL-QHDDLSGHAKLVENTRSRICGAEMSTTRFEAEEWITKGK--VHLLQSDYNRCGGLTE 296 (394)
T ss_dssp HHTGGGCCSEEE-------SCS-CTTCHHHHHHHHHHCSSCBEECTTCCHHHHHHHHHHTTC--CSEECCCTTTTTHHHH
T ss_pred HHhhhcCCeEEE-------CCC-CchhHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCC--CCeEecCccccCCHHH
Confidence 999999999985 222 345889999999999999999999999999999987532 00111122 111
Q ss_pred HHHHHHHHHhcCCCC
Q psy4398 265 KTILYAHCKYKRFEV 279 (306)
Q Consensus 265 ~~~l~~~~~~~g~~~ 279 (306)
-+.+.+..+++|++.
T Consensus 297 ~~~ia~~A~~~gi~~ 311 (394)
T 3mkc_A 297 LRRITEMATANNVQV 311 (394)
T ss_dssp HHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHcCCEE
Confidence 125667778888873
No 183
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=98.03 E-value=6.7e-05 Score=69.85 Aligned_cols=125 Identities=14% Similarity=0.190 Sum_probs=98.7
Q ss_pred CceEEEecCCCH-HHHHHHHHHHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhccc--ccEEEEec
Q psy4398 102 NKIILQIGTADP-ERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLS--IPVSCKIR 177 (306)
Q Consensus 102 ~p~ivql~g~~~-~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~--~pv~vKir 177 (306)
.|+...+...++ +.+.++++.++ .||..+-+.+|+. +++.-.+.++++|+.++ .++.+...
T Consensus 132 v~~~~t~~~~~~~~~~~~~~~~~~~~G~~~~KiKvg~~---------------~~~~d~~~v~avR~~~g~~~~l~vDan 196 (370)
T 1chr_A 132 IPIAWTLASGDTKRDLDSAVEMIERRRHNRFKVKLGFR---------------SPQDDLIHMEALSNSLGSKAYLRVDVN 196 (370)
T ss_dssp EEBEEEECSSSHHHHHHHHHHHHHTTCCCEEEEECSSS---------------CSHHHHHHHHHHHHHSSTTCCEEEECT
T ss_pred eeEEEEecCCCcHHHHHHHHHHHHHCCCCEEEEecCCC---------------CHHHHHHHHHHHHHhcCCCCEEEEECC
Confidence 355455554444 45667777776 5999999987752 24455678899999883 78999988
Q ss_pred cCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHh
Q psy4398 178 VFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSL 249 (306)
Q Consensus 178 ~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~ 249 (306)
.+|+.+++.++++.+++.|+++|- ++. .+.+++..+++++.+++||++...+.+.++++++++.
T Consensus 197 ~~~~~~~a~~~~~~l~~~~i~~iE-------qP~-~~~~~~~~~~l~~~~~iPia~dE~~~~~~~~~~~~~~ 260 (370)
T 1chr_A 197 QAWDEQVASVYIPELEALGVELIE-------QPV-GRENTQALRRLSDNNRVAIMADESLSTLASAFDLARD 260 (370)
T ss_dssp TCCCTTHHHHHTHHHHTTTEEEEE-------CCS-CTTCHHHHHHHHHHSCSEEEESSSCCSHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHHhcCCCEEE-------CCC-CcccHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHc
Confidence 899999999999999999988874 222 3457889999999999999999999999999998875
No 184
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=98.03 E-value=5e-05 Score=70.78 Aligned_cols=146 Identities=10% Similarity=0.104 Sum_probs=103.8
Q ss_pred eEEEecC-CCHHHHHHHHHHHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc-cccEEEEeccCC
Q psy4398 104 IILQIGT-ADPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL-SIPVSCKIRVFH 180 (306)
Q Consensus 104 ~ivql~g-~~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~g~ 180 (306)
+..+++. .+++++.+.++++. +||+.+.++++ | +...+.++++|+.+ ++++.+....+|
T Consensus 139 ~~~~~g~~~~~~~~~~~a~~~~~~G~~~iKik~~-~-----------------~~d~~~v~avr~a~~~~~l~vDan~~~ 200 (375)
T 1r0m_A 139 VGVSLGIQADEQATVDLVRRHVEQGYRRIKLKIK-P-----------------GWDVQPVRATREAFPDIRLTVDANSAY 200 (375)
T ss_dssp BCEEECCCSSHHHHHHHHHHHHHTTCSCEEEECB-T-----------------TBSHHHHHHHHHHCTTSCEEEECTTCC
T ss_pred eeEEecCCCCHHHHHHHHHHHHHhcccEEEEecC-h-----------------HHHHHHHHHHHHHcCCCeEEEeCCCCC
Confidence 3334433 48888888877664 59999999863 1 22235577777766 567888877789
Q ss_pred ChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhhhhccccCCC
Q psy4398 181 NEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNCAFLRNHYPV 260 (306)
Q Consensus 181 ~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v~vGrall~~ 260 (306)
+.++ .++++.+++.|+++|. ++. .+.+++..+++++.+++||++.+.+.+.++++++++.+. ...+.-+
T Consensus 201 ~~~~-~~~~~~l~~~~i~~iE-------qP~-~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~--~d~v~ik 269 (375)
T 1r0m_A 201 TLAD-AGRLRQLDEYDLTYIE-------QPL-AWDDLVDHAELARRIRTPLCLDESVASASDARKALALGA--GGVINLK 269 (375)
T ss_dssp CGGG-HHHHHTTGGGCCSCEE-------CCS-CTTCSHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTS--CSEEEEC
T ss_pred CHHH-HHHHHHHHhCCCcEEE-------CCC-CcccHHHHHHHHHhCCCCEEecCccCCHHHHHHHHHhCC--CCEEEEC
Confidence 9999 9999999999999885 233 346789999999999999999999999999999987532 0001112
Q ss_pred C-Cc----hHHHHHHHHHhcCCC
Q psy4398 261 E-KL----PKTILYAHCKYKRFE 278 (306)
Q Consensus 261 p-~~----~~~~l~~~~~~~g~~ 278 (306)
+ .+ .-+.+.++.+++|++
T Consensus 270 ~~~~GGit~~~~i~~~A~~~g~~ 292 (375)
T 1r0m_A 270 VARVGGHAESRRVHDVAQSFGAP 292 (375)
T ss_dssp TTTTTSHHHHHHHHHHHHHTTCC
T ss_pred cchhcCHHHHHHHHHHHHHcCCc
Confidence 2 11 123566667777776
No 185
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=98.00 E-value=0.00015 Score=67.80 Aligned_cols=124 Identities=17% Similarity=0.187 Sum_probs=99.9
Q ss_pred CceEEEecCCCHHHHHHHHHHH-hcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhccc--ccEEEEecc
Q psy4398 102 NKIILQIGTADPERALEAAKKV-EHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLS--IPVSCKIRV 178 (306)
Q Consensus 102 ~p~ivql~g~~~~~~~~aa~~~-~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~--~pv~vKir~ 178 (306)
.|+...++..++++..+.++.. ++||..+-+++|. +++.-.+.++++|+.++ .++.+....
T Consensus 132 v~~y~t~g~~~~e~~~~~a~~~~~~Gf~~~KlK~g~----------------~~~~d~~~v~avR~a~g~~~~L~vDaN~ 195 (379)
T 3r0u_A 132 IVTDVSISCGNVAETIQNIQNGVEANFTAIKVKTGA----------------DFNRDIQLLKALDNEFSKNIKFRFDANQ 195 (379)
T ss_dssp EEBCEEECCCCHHHHHHHHHHHHHTTCCEEEEECSS----------------CHHHHHHHHHHHHHHCCTTSEEEEECTT
T ss_pred EEEEEEecCCCHHHHHHHHHHHHHcCCCEEeeecCC----------------CHHHHHHHHHHHHHhcCCCCeEEEeCCC
Confidence 4556667777898888777755 4699999998663 35556778899999884 688888888
Q ss_pred CCChHHHHHHHHHHHH--cCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHh
Q psy4398 179 FHNEADTIALCKRLEA--CGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSL 249 (306)
Q Consensus 179 g~~~~~~~~~a~~l~~--~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~ 249 (306)
+|+.+++.++++.+++ .|+.+|- ++ ..+.+++..+++++.+++||.+...+.+..+++++++.
T Consensus 196 ~w~~~~A~~~~~~l~~~~~~l~~iE-------eP-~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~ 260 (379)
T 3r0u_A 196 GWNLAQTKQFIEEINKYSLNVEIIE-------QP-VKYYDIKAMAEITKFSNIPVVADESVFDAKDAERVIDE 260 (379)
T ss_dssp CCCHHHHHHHHHHHHTSCCCEEEEE-------CC-SCTTCHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHT
T ss_pred CcCHHHHHHHHHHHhhcCCCcEEEE-------CC-CCcccHHHHHHHHhcCCCCEEeCCccCCHHHHHHHHHc
Confidence 8999999999999999 6676663 22 23457899999999999999999999999999998875
No 186
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=98.00 E-value=3.3e-05 Score=66.14 Aligned_cols=94 Identities=18% Similarity=0.098 Sum_probs=76.1
Q ss_pred HHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhh---hhccccCCC
Q psy4398 184 DTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNC---AFLRNHYPV 260 (306)
Q Consensus 184 ~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v---~vGrall~~ 260 (306)
+..++++.+...|+..+.+++....+...+. .++.++++++..++|+|++||+.++++..+.++.|+ .+|++++.+
T Consensus 131 ~~~~~i~~~~~~~~~~vli~~~~~~g~~~g~-~~~~i~~~~~~~~~Pvia~~g~~~~~~~~~~~~~G~~~~~vg~a~~~~ 209 (237)
T 3cwo_X 131 LLRDWVVEVEKRGAGEILLTSIDRDGTKSGY-DTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAGADAALAASVFHFR 209 (237)
T ss_dssp EHHHHHHHHHHHTCSEEEEEETTTTTCCSCC-CHHHHHHHGGGCCSCEEEESCCCSHHHHHHHHHHTCSEEEESHHHHTT
T ss_pred CHHHHHHHHhhcCCCeEEEEecCCCCccccc-cHHHHHHHHHhcCCCEEecCCCCCHHHHHHHHHcCcHHHhhhHHHHcC
Confidence 4778889999999998888886555555554 488999999999999999999999999999988754 999999998
Q ss_pred CCchHHHHHHHHHhcCCCC
Q psy4398 261 EKLPKTILYAHCKYKRFEV 279 (306)
Q Consensus 261 p~~~~~~l~~~~~~~g~~~ 279 (306)
|...+ ++.+++++.|+.+
T Consensus 210 ~~~~~-~~~~~l~~~~~~~ 227 (237)
T 3cwo_X 210 EIDVR-ELKEYLKKHGVNV 227 (237)
T ss_dssp SSCHH-HHHHHHHTTTCCC
T ss_pred CCCHH-HHHHHHHHCCCce
Confidence 84433 4456788888643
No 187
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=98.00 E-value=3.5e-05 Score=67.87 Aligned_cols=148 Identities=9% Similarity=0.110 Sum_probs=93.3
Q ss_pred eEEEecC--CCHHHHHHHHHHHhc-CCCEEEEccCCCccccccCCcccccc----------CChHHHHHHHHHHHhcccc
Q psy4398 104 IILQIGT--ADPERALEAAKKVEH-DVAAIDINMGCPKQFSLTGGMGAALL----------STPDIACNILTTLISNLSI 170 (306)
Q Consensus 104 ~ivql~g--~~~~~~~~aa~~~~~-g~d~veln~gcP~~~~~~~~~G~~l~----------~~~~~~~eiv~~v~~~~~~ 170 (306)
++.=+.. .+.+.+.++.+.+.+ |+|.|||.+.-.. ...| |-.+. -+.+.+.++++++|+. .
T Consensus 16 li~yitaG~P~~~~t~~~~~~l~~~GaD~iElGiPfSD--P~aD--GpvIq~a~~rAL~~g~~~~~~~~~~~~~r~~--~ 89 (252)
T 3tha_A 16 NVAYTVLGYPNLQTSEAFLQRLDQSPIDILELGVAYSD--PIAD--GEIIADAAKIALDQGVDIHSVFELLARIKTK--K 89 (252)
T ss_dssp EEEEEETTSSCHHHHHHHHHTGGGSSCSEEEEECCCSC--CCSC--CCHHHHHHHHHHHTTCCHHHHHHHHHHCCCS--S
T ss_pred eEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCC--CCCC--cHHHHHHHHHHHHCCCCHHHHHHHHHHHhcC--C
Confidence 4444433 466889998887765 9999999754321 1222 11111 2456777888888765 5
Q ss_pred cEEEEeccCCChH---HHHHHHHHHHHcCCcEEEEccc--------------------------CC----------CCCC
Q psy4398 171 PVSCKIRVFHNEA---DTIALCKRLEACGIIAIGVHGR--------------------------TK----------AERP 211 (306)
Q Consensus 171 pv~vKir~g~~~~---~~~~~a~~l~~~G~d~i~v~~~--------------------------~~----------~~~~ 211 (306)
|+.+-.- +++- ...++++.+.++|+|++.+-+- +. ...+
T Consensus 90 Pivlm~Y--~N~i~~~G~e~F~~~~~~aGvdG~IipDLP~eE~~~~~~~~~~~Gl~~I~lvaP~t~~eRi~~ia~~a~gF 167 (252)
T 3tha_A 90 ALVFMVY--YNLIFSYGLEKFVKKAKSLGICALIVPELSFEESDDLIKECERYNIALITLVSVTTPKERVKKLVKHAKGF 167 (252)
T ss_dssp EEEEECC--HHHHHHHCHHHHHHHHHHTTEEEEECTTCCGGGCHHHHHHHHHTTCEECEEEETTSCHHHHHHHHTTCCSC
T ss_pred CEEEEec--cCHHHHhhHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHhCCCe
Confidence 7665333 2211 1456677777777777765221 10 0011
Q ss_pred ---------CCCC------cHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHh--hhhhccccCC
Q psy4398 212 ---------RHRN------RIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSL--NCAFLRNHYP 259 (306)
Q Consensus 212 ---------~~p~------~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~--~v~vGrall~ 259 (306)
.|.. ..++++++++.+++||+..+||.++++++++.+. ++.+|+++++
T Consensus 168 iY~Vs~~GvTG~~~~~~~~~~~~v~~vr~~~~~Pv~vGfGIst~e~a~~~~~~ADGVIVGSAiVk 232 (252)
T 3tha_A 168 IYLLASIGITGTKSVEEAILQDKVKEIRSFTNLPIFVGFGIQNNQDVKRMRKVADGVIVGTSIVK 232 (252)
T ss_dssp EEEECCSCSSSCSHHHHHHHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHTTTSSEEEECHHHHH
T ss_pred EEEEecCCCCCcccCCCHHHHHHHHHHHHhcCCcEEEEcCcCCHHHHHHHHhcCCEEEECHHHHH
Confidence 1211 1457899999999999999999999999988763 7799999863
No 188
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=97.99 E-value=0.00013 Score=68.35 Aligned_cols=128 Identities=11% Similarity=0.108 Sum_probs=103.3
Q ss_pred CCCceEEEecCCCHHHHHHHHHHHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEe
Q psy4398 100 EKNKIILQIGTADPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKI 176 (306)
Q Consensus 100 ~~~p~ivql~g~~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKi 176 (306)
...|+...+...+++++.+.++.+. +||..+-+++|++.. ..+++.-.+.++++|+.+ ++++.+..
T Consensus 133 ~~v~~y~s~~~~~~e~~~~~a~~~~~~G~~~~K~Kvg~~~~-----------~~~~~~d~~~v~avR~a~G~~~~L~vDa 201 (386)
T 3fv9_G 133 GPVPVISSIGGDTPEAMRAKVARHRAQGFKGHSIKIGASEA-----------EGGPALDAERITACLADRQPGEWYLADA 201 (386)
T ss_dssp SCBCEEEEECSCCHHHHHHHHHHHHHTTCCEEEEECCCCTT-----------TTHHHHHHHHHHHHTTTCCTTCEEEEEC
T ss_pred CceeeeEecCCCCHHHHHHHHHHHHHCCCCEEEEeccCCCC-----------CCCHHHHHHHHHHHHHHcCCCCeEEEEC
Confidence 3567888888889999988887664 699999999998631 123566678899999988 46788888
Q ss_pred ccCCChHHHHHHHHHH-HHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHh
Q psy4398 177 RVFHNEADTIALCKRL-EACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSL 249 (306)
Q Consensus 177 r~g~~~~~~~~~a~~l-~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~ 249 (306)
..+|+.+++.++++.+ ++.++ +|- ++. + +++..+++++.+++||.+...+.+..+++++++.
T Consensus 202 N~~~~~~~A~~~~~~l~~~~~i-~iE-------eP~--~-~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~ 264 (386)
T 3fv9_G 202 NNGLTVEHALRMLSLLPPGLDI-VLE-------APC--A-SWAETKSLRARCALPLLLDELIQTETDLIAAIRD 264 (386)
T ss_dssp TTCCCHHHHHHHHHHSCSSCCC-EEE-------CCC--S-SHHHHHHHHTTCCSCEEESTTCCSHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHhhccCCc-EEe-------cCC--C-CHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHh
Confidence 8889999999999999 76776 552 222 2 7888999999999999999999999999999875
No 189
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=97.96 E-value=7.3e-06 Score=72.09 Aligned_cols=83 Identities=12% Similarity=0.160 Sum_probs=68.5
Q ss_pred HHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhh---hhccccCC
Q psy4398 183 ADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNC---AFLRNHYP 259 (306)
Q Consensus 183 ~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v---~vGrall~ 259 (306)
.+..++|+.+.+.|+|.+++-+-+... ...+.++++++++.+.+.+|+...|||+|.++++.+++.|+ .+|++.+.
T Consensus 31 ~dP~~~a~~~~~~gad~lhvvDld~a~-~~~~~~~~~i~~i~~~~~~pl~vGGGIrs~e~~~~~l~~GadkVii~t~a~~ 109 (243)
T 4gj1_A 31 YNPLKKFKEYEKAGAKELHLVDLTGAK-DPSKRQFALIEKLAKEVSVNLQVGGGIRSKEEVKALLDCGVKRVVIGSMAIK 109 (243)
T ss_dssp CCHHHHHHHHHHHTCCEEEEEEHHHHH-CGGGCCHHHHHHHHHHCCSEEEEESSCCCHHHHHHHHHTTCSEEEECTTTTT
T ss_pred CCHHHHHHHHHHCCCCEEEEEecCccc-ccchhHHHHHHHHHHhcCCCeEeccccccHHHHHHHHHcCCCEEEEcccccc
Confidence 357899999999999999986533211 11245889999999999999999999999999999999986 99999999
Q ss_pred CCCchHH
Q psy4398 260 VEKLPKT 266 (306)
Q Consensus 260 ~p~~~~~ 266 (306)
||.+.+.
T Consensus 110 ~p~li~e 116 (243)
T 4gj1_A 110 DATLCLE 116 (243)
T ss_dssp CHHHHHH
T ss_pred CCchHHH
Confidence 9965433
No 190
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=97.94 E-value=7.9e-05 Score=64.61 Aligned_cols=136 Identities=10% Similarity=0.122 Sum_probs=91.1
Q ss_pred CceEEEecCCCHHHHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEeccCCC
Q psy4398 102 NKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFHN 181 (306)
Q Consensus 102 ~p~ivql~g~~~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~ 181 (306)
.++.+-+..+++++|.+.+.. .|+|+|.+|...+. ..+.+.++.+++. ++.+.+-+. ++
T Consensus 65 ~~~~v~lmv~d~~~~i~~~~~--agad~v~vH~~~~~----------------~~~~~~~~~i~~~-g~~igv~~~--p~ 123 (228)
T 1h1y_A 65 AYLDCHLMVTNPSDYVEPLAK--AGASGFTFHIEVSR----------------DNWQELIQSIKAK-GMRPGVSLR--PG 123 (228)
T ss_dssp SEEEEEEESSCGGGGHHHHHH--HTCSEEEEEGGGCT----------------TTHHHHHHHHHHT-TCEEEEEEC--TT
T ss_pred CcEEEEEEecCHHHHHHHHHH--cCCCEEEECCCCcc----------------cHHHHHHHHHHHc-CCCEEEEEe--CC
Confidence 478888888888777554432 59999999854311 1124556666654 666665554 22
Q ss_pred hHHHHHHHHHHHHc--CCcEEEEcccCCC---CCCCCCCcHHHHHHHHhhC-CCcEEEecCCCCHHHHHHHHHhh---hh
Q psy4398 182 EADTIALCKRLEAC--GIIAIGVHGRTKA---ERPRHRNRIEMIRTLTQHL-KIPVIANGGSKEIVDYGGVFSLN---CA 252 (306)
Q Consensus 182 ~~~~~~~a~~l~~~--G~d~i~v~~~~~~---~~~~~p~~~~~v~~i~~~~-~ipvia~GGI~s~~~~~~~l~~~---v~ 252 (306)
+..+..+.+.+. ++|+|.+...... +.+ .+..++.++++++.. ++||++.|||+. +++.++++.+ +.
T Consensus 124 --t~~e~~~~~~~~~~~~d~vl~~sv~pg~~g~~~-~~~~l~~i~~~~~~~~~~pi~v~GGI~~-~ni~~~~~aGaD~vv 199 (228)
T 1h1y_A 124 --TPVEEVFPLVEAENPVELVLVMTVEPGFGGQKF-MPEMMEKVRALRKKYPSLDIEVDGGLGP-STIDVAASAGANCIV 199 (228)
T ss_dssp --SCGGGGHHHHHSSSCCSEEEEESSCTTCSSCCC-CGGGHHHHHHHHHHCTTSEEEEESSCST-TTHHHHHHHTCCEEE
T ss_pred --CCHHHHHHHHhcCCCCCEEEEEeecCCCCcccC-CHHHHHHHHHHHHhcCCCCEEEECCcCH-HHHHHHHHcCCCEEE
Confidence 112334455555 8999988544321 222 234577888999988 899999999986 8888888865 49
Q ss_pred hccccCCCCC
Q psy4398 253 FLRNHYPVEK 262 (306)
Q Consensus 253 vGrall~~p~ 262 (306)
+||+++..+.
T Consensus 200 vGsai~~~~d 209 (228)
T 1h1y_A 200 AGSSIFGAAE 209 (228)
T ss_dssp ESHHHHTSSC
T ss_pred ECHHHHCCCC
Confidence 9999997554
No 191
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=97.93 E-value=5.3e-06 Score=72.50 Aligned_cols=78 Identities=14% Similarity=0.160 Sum_probs=63.7
Q ss_pred HHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhh---hhccccCCC
Q psy4398 184 DTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNC---AFLRNHYPV 260 (306)
Q Consensus 184 ~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v---~vGrall~~ 260 (306)
+..++++.++++|+|.|+++..+... ...+.. +.++++++.+++|++.+|||.|+++++.+++.++ .+|++++.+
T Consensus 32 d~~~~a~~~~~~Gad~i~v~~~d~~~-~~~~~~-~~i~~i~~~~~ipv~v~ggi~~~~~~~~~l~~Gad~V~lg~~~l~~ 109 (244)
T 2y88_A 32 SAVDAALGWQRDGAEWIHLVDLDAAF-GRGSNH-ELLAEVVGKLDVQVELSGGIRDDESLAAALATGCARVNVGTAALEN 109 (244)
T ss_dssp EHHHHHHHHHHTTCSEEEEEEHHHHT-TSCCCH-HHHHHHHHHCSSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHHC
T ss_pred CHHHHHHHHHHcCCCEEEEEcCcccc-cCCChH-HHHHHHHHhcCCcEEEECCCCCHHHHHHHHHcCCCEEEECchHhhC
Confidence 67899999999999999997643211 112334 8999999999999999999999999999998754 889988887
Q ss_pred CCc
Q psy4398 261 EKL 263 (306)
Q Consensus 261 p~~ 263 (306)
|.+
T Consensus 110 p~~ 112 (244)
T 2y88_A 110 PQW 112 (244)
T ss_dssp HHH
T ss_pred hHH
Confidence 743
No 192
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=97.90 E-value=3.3e-05 Score=72.56 Aligned_cols=149 Identities=7% Similarity=-0.090 Sum_probs=107.3
Q ss_pred HHHHHHHHHHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEeccCCChHHHHHHHH
Q psy4398 114 ERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIRVFHNEADTIALCK 190 (306)
Q Consensus 114 ~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~~a~ 190 (306)
+++.+.++++. +||+.+.++++...... + + .++++...++++++|+.+ ++++.+....+|+.+++.++++
T Consensus 150 e~~~~~a~~~~~~Gf~~vKik~g~~~~~~--~----~-~~~~~~~~e~v~avR~~~g~d~~l~vDan~~~~~~~ai~~~~ 222 (392)
T 3p3b_A 150 ALMQEEAMQGYAKGQRHFKIKVGRGGRHM--P----L-WEGTKRDIAIVRGISEVAGPAGKIMIDANNAYNLNLTKEVLA 222 (392)
T ss_dssp HHHHHHHHHHHHTTCCCEEEECCHHHHTS--C----H-HHHHHHHHHHHHHHHHHHCTTCCEEEECTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEECcCcCcccC--C----c-cccHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHH
Confidence 88888887665 59999999876321100 0 1 125677788999999887 4778887777899999999999
Q ss_pred HHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhh-----CCCcEEEecCCCCHHHHHHHHHhhhhhccccCCCC-C--
Q psy4398 191 RLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQH-----LKIPVIANGGSKEIVDYGGVFSLNCAFLRNHYPVE-K-- 262 (306)
Q Consensus 191 ~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~-----~~ipvia~GGI~s~~~~~~~l~~~v~vGrall~~p-~-- 262 (306)
.+++.|++++- ++.. .+++..+++++. +++||++.+ +.+.++++++++.+. ...+.-++ .
T Consensus 223 ~l~~~~i~~iE-------~P~~--~d~~~~~~l~~~l~~~g~~iPIa~dE-~~~~~~~~~~i~~~~--~d~v~ik~~~~G 290 (392)
T 3p3b_A 223 ALSDVNLYWLE-------EAFH--EDEALYEDLKEWLGQRGQNVLIADGE-GLASPHLIEWATRGR--VDVLQYDIIWPG 290 (392)
T ss_dssp HTTTSCEEEEE-------CSSS--CCHHHHHHHHHHHHHHTCCCEEEECC-SSCCTTHHHHHHTTS--CCEECCBTTTBC
T ss_pred HHHhcCCCEEe-------cCCc--ccHHHHHHHHHhhccCCCCccEEecC-CCCHHHHHHHHHcCC--CCEEEeCccccC
Confidence 99999988764 2222 578899999998 899999999 999999999997632 00111122 1
Q ss_pred chH-HHHHHHHHhcCCCCCc
Q psy4398 263 LPK-TILYAHCKYKRFEVPK 281 (306)
Q Consensus 263 ~~~-~~l~~~~~~~g~~~~~ 281 (306)
+.+ +.+.++.+++|++...
T Consensus 291 it~~~~i~~~A~~~gi~~~~ 310 (392)
T 3p3b_A 291 FTHWMELGEKLDAHGLRSAP 310 (392)
T ss_dssp HHHHHHHHHHHHHTTCEECC
T ss_pred HHHHHHHHHHHHHcCCEEEe
Confidence 222 3677788888887333
No 193
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=97.89 E-value=7.2e-05 Score=69.53 Aligned_cols=117 Identities=14% Similarity=0.180 Sum_probs=91.8
Q ss_pred EEecC-CCHHHHHHHHHHHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc-cccEEEEeccCCCh
Q psy4398 106 LQIGT-ADPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL-SIPVSCKIRVFHNE 182 (306)
Q Consensus 106 vql~g-~~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~g~~~ 182 (306)
.+++. .+++++.+.++++. +||+.+.++++ | +...+.++++|+.+ ++++.+....+|+.
T Consensus 134 ~~~g~~~~~~~~~~~a~~~~~~G~~~iKik~~-~-----------------~~d~~~v~avr~a~~~~~l~vDan~~~~~ 195 (369)
T 2zc8_A 134 VSLGIQPSVEDTLRVVERHLEEGYRRIKLKIK-P-----------------GWDYEVLKAVREAFPEATLTADANSAYSL 195 (369)
T ss_dssp EEECCCSSHHHHHHHHHHHHHTTCSCEEEECB-T-----------------TBSHHHHHHHHHHCTTSCEEEECTTCCCG
T ss_pred EEecCCCCHHHHHHHHHHHHHhhhheeeeecC-h-----------------hHHHHHHHHHHHHcCCCeEEEecCCCCCH
Confidence 34433 47888888877664 69999999863 1 22235577777766 56788877778999
Q ss_pred HHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHh
Q psy4398 183 ADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSL 249 (306)
Q Consensus 183 ~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~ 249 (306)
++ .++++.+++.|+++|. ++. .+.+++..+++++.+++||++...+.+.++++++++.
T Consensus 196 ~~-~~~~~~l~~~~i~~iE-------qP~-~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~ 253 (369)
T 2zc8_A 196 AN-LAQLKRLDELRLDYIE-------QPL-AYDDLLDHAKLQRELSTPICLDESLTGAEKARKAIEL 253 (369)
T ss_dssp GG-HHHHHGGGGGCCSCEE-------CCS-CTTCSHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHH
T ss_pred HH-HHHHHHHHhCCCcEEE-------CCC-CcccHHHHHHHHhhCCCCEEEcCccCCHHHHHHHHHh
Confidence 99 9999999999999886 222 2457889999999999999999999999999999875
No 194
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=97.88 E-value=0.00039 Score=61.89 Aligned_cols=143 Identities=13% Similarity=0.051 Sum_probs=100.4
Q ss_pred CCceEEEecCCCHHHHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEeccCC
Q psy4398 101 KNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFH 180 (306)
Q Consensus 101 ~~p~ivql~g~~~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~ 180 (306)
+.|++.+=+-.++.+.. +....|+|+|=|...+ + +.+.+.++++..++ .+..+.|-+.
T Consensus 120 ~lPVl~Kdfi~d~~qi~---ea~~~GAD~VlLi~a~--------------L-~~~~l~~l~~~a~~-lGl~~lvevh--- 177 (272)
T 3tsm_A 120 SLPALRKDFLFDPYQVY---EARSWGADCILIIMAS--------------V-DDDLAKELEDTAFA-LGMDALIEVH--- 177 (272)
T ss_dssp SSCEEEESCCCSTHHHH---HHHHTTCSEEEEETTT--------------S-CHHHHHHHHHHHHH-TTCEEEEEEC---
T ss_pred CCCEEECCccCCHHHHH---HHHHcCCCEEEEcccc--------------c-CHHHHHHHHHHHHH-cCCeEEEEeC---
Confidence 46776654445554433 2234599999997543 1 34567778777766 4777777777
Q ss_pred ChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhC--CCcEEEecCCCCHHHHHHHHHhh---hhhcc
Q psy4398 181 NEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHL--KIPVIANGGSKEIVDYGGVFSLN---CAFLR 255 (306)
Q Consensus 181 ~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~--~ipvia~GGI~s~~~~~~~l~~~---v~vGr 255 (306)
+. +-++.+.+.|++.|-++.|..... ..+++...++.+.+ ++|+|+-|||.+++|+..+.+.| +.||+
T Consensus 178 ~~----eEl~~A~~~ga~iIGinnr~l~t~---~~dl~~~~~L~~~ip~~~~vIaesGI~t~edv~~l~~~Ga~gvLVG~ 250 (272)
T 3tsm_A 178 DE----AEMERALKLSSRLLGVNNRNLRSF---EVNLAVSERLAKMAPSDRLLVGESGIFTHEDCLRLEKSGIGTFLIGE 250 (272)
T ss_dssp SH----HHHHHHTTSCCSEEEEECBCTTTC---CBCTHHHHHHHHHSCTTSEEEEESSCCSHHHHHHHHTTTCCEEEECH
T ss_pred CH----HHHHHHHhcCCCEEEECCCCCccC---CCChHHHHHHHHhCCCCCcEEEECCCCCHHHHHHHHHcCCCEEEEcH
Confidence 22 334556679999999988764332 24678888888888 69999999999999999999875 49999
Q ss_pred ccCCCCCchHHHHHHHHH
Q psy4398 256 NHYPVEKLPKTILYAHCK 273 (306)
Q Consensus 256 all~~p~~~~~~l~~~~~ 273 (306)
++++.+. +...+++++.
T Consensus 251 almr~~d-~~~~~~~l~~ 267 (272)
T 3tsm_A 251 SLMRQHD-VAAATRALLT 267 (272)
T ss_dssp HHHTSSC-HHHHHHHHHH
T ss_pred HHcCCcC-HHHHHHHHHh
Confidence 9997543 3345555554
No 195
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=97.87 E-value=6.1e-06 Score=72.24 Aligned_cols=78 Identities=14% Similarity=0.173 Sum_probs=63.6
Q ss_pred HHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhh---hhccccCCC
Q psy4398 184 DTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNC---AFLRNHYPV 260 (306)
Q Consensus 184 ~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v---~vGrall~~ 260 (306)
+..++++.++++|+|.|+++..+... ...+.+ +.++++++.+++|++.+|||.|+++++.+++.++ .+|+.++.+
T Consensus 33 d~~~~a~~~~~~Gad~i~v~~~d~~~-~~~~~~-~~i~~i~~~~~ipv~v~ggI~~~~~~~~~l~~Gad~V~lg~~~l~~ 110 (244)
T 1vzw_A 33 SPLEAALAWQRSGAEWLHLVDLDAAF-GTGDNR-ALIAEVAQAMDIKVELSGGIRDDDTLAAALATGCTRVNLGTAALET 110 (244)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEHHHHH-TSCCCH-HHHHHHHHHCSSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHHC
T ss_pred CHHHHHHHHHHcCCCEEEEecCchhh-cCCChH-HHHHHHHHhcCCcEEEECCcCCHHHHHHHHHcCCCEEEECchHhhC
Confidence 67889999999999999997643211 112345 8899999999999999999999999999998754 889988887
Q ss_pred CCc
Q psy4398 261 EKL 263 (306)
Q Consensus 261 p~~ 263 (306)
|.+
T Consensus 111 p~~ 113 (244)
T 1vzw_A 111 PEW 113 (244)
T ss_dssp HHH
T ss_pred HHH
Confidence 743
No 196
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=97.87 E-value=4.6e-05 Score=66.25 Aligned_cols=139 Identities=11% Similarity=0.061 Sum_probs=95.5
Q ss_pred ceEEEecCCCHHHHHHHHHHHhc-CCCEEEEcc----CCCccccccCCccccccCChHHHHHHHHHHHhc--ccccEEEE
Q psy4398 103 KIILQIGTADPERALEAAKKVEH-DVAAIDINM----GCPKQFSLTGGMGAALLSTPDIACNILTTLISN--LSIPVSCK 175 (306)
Q Consensus 103 p~ivql~g~~~~~~~~aa~~~~~-g~d~veln~----gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~--~~~pv~vK 175 (306)
.+..+|...|...+.+..+.+++ |+|.+-+-. -.|+- .+| .++++++|+. .+.|+.+.
T Consensus 6 ~i~psil~~D~~~l~~~i~~l~~~g~d~~h~DVmDg~Fvpn~-----~~G----------~~~v~~ir~~~~~~~~~dvh 70 (228)
T 3ovp_A 6 KIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNI-----TFG----------HPVVESLRKQLGQDPFFDMH 70 (228)
T ss_dssp EEEEBCTTSCGGGHHHHHHHHHHTTCSCEEEEEEBSSSSSCB-----CBC----------HHHHHHHHHHHCSSSCEEEE
T ss_pred EeeeeheeCCchhHHHHHHHHHHcCCCEEEEEecCCCcCccc-----ccC----------HHHHHHHHHhhCCCCcEEEE
Confidence 46677888888888888888865 888655522 23542 133 3467777777 47889988
Q ss_pred eccCCChHHHHHHHHHHHHcCCcEEEEcccCC---------------------------------------------CCC
Q psy4398 176 IRVFHNEADTIALCKRLEACGIIAIGVHGRTK---------------------------------------------AER 210 (306)
Q Consensus 176 ir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~---------------------------------------------~~~ 210 (306)
+-. .+++ ++++.+.++|+|.|++|.-.. ..+
T Consensus 71 Lmv-~~p~---~~i~~~~~aGad~itvH~Ea~~~~~~~i~~i~~~G~k~gval~p~t~~e~l~~~l~~~D~Vl~msv~pG 146 (228)
T 3ovp_A 71 MMV-SKPE---QWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIKPGTSVEYLAPWANQIDMALVMTVEPG 146 (228)
T ss_dssp EEC-SCGG---GGHHHHHHHTCSEEEEEGGGCSCHHHHHHHHHHTTCEEEEEECTTSCGGGTGGGGGGCSEEEEESSCTT
T ss_pred EEe-CCHH---HHHHHHHHcCCCEEEEccCCchhHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHHhccCCeEEEeeecCC
Confidence 774 2333 455677789999999875210 001
Q ss_pred CC----CCCcHHHHHHHHhhC-CCcEEEecCCCCHHHHHHHHHhhh---hhccccCCCC
Q psy4398 211 PR----HRNRIEMIRTLTQHL-KIPVIANGGSKEIVDYGGVFSLNC---AFLRNHYPVE 261 (306)
Q Consensus 211 ~~----~p~~~~~v~~i~~~~-~ipvia~GGI~s~~~~~~~l~~~v---~vGrall~~p 261 (306)
+. .|..++-++++++.. +++|..-|||+ .+++.+++++|+ .+||+++..+
T Consensus 147 f~Gq~f~~~~l~ki~~lr~~~~~~~I~VdGGI~-~~t~~~~~~aGAd~~VvGsaIf~a~ 204 (228)
T 3ovp_A 147 FGGQKFMEDMMPKVHWLRTQFPSLDIEVDGGVG-PDTVHKCAEAGANMIVSGSAIMRSE 204 (228)
T ss_dssp TCSCCCCGGGHHHHHHHHHHCTTCEEEEESSCS-TTTHHHHHHHTCCEEEESHHHHTCS
T ss_pred CCCcccCHHHHHHHHHHHHhcCCCCEEEeCCcC-HHHHHHHHHcCCCEEEEeHHHhCCC
Confidence 11 123567788888877 68999999996 899999998875 8999998644
No 197
>4hnl_A Mandelate racemase/muconate lactonizing enzyme; dehydratase, magnesium binding, enzyme function initiative,; 1.48A {Enterococcus gallinarum EG2} PDB: 3s47_A
Probab=97.83 E-value=0.00035 Score=66.12 Aligned_cols=167 Identities=5% Similarity=0.057 Sum_probs=117.0
Q ss_pred CCceEEEecCCCHHHHHHHHHHHh-cCCCEEEEccCCCccccc-----cCCccccccC---ChHHHHHHHHHHHhcc--c
Q psy4398 101 KNKIILQIGTADPERALEAAKKVE-HDVAAIDINMGCPKQFSL-----TGGMGAALLS---TPDIACNILTTLISNL--S 169 (306)
Q Consensus 101 ~~p~ivql~g~~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~-----~~~~G~~l~~---~~~~~~eiv~~v~~~~--~ 169 (306)
..|+...+.+.+++++.+.++.+. +||..+-+.++.+..+.. .....+.... +++...+.++++|+++ +
T Consensus 142 ~v~~y~~~~~~~~~~~~~~a~~~~~~G~~~~K~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~v~avR~a~G~~ 221 (421)
T 4hnl_A 142 AIPAYTHAVADNLDDLYHEIDRFLAAGYRYIRCQLGFYGGNPSQLQTPEEPISGSYFDQTDYMETTLKMFAAIKEKYGNQ 221 (421)
T ss_dssp CEEEEEEEEESSHHHHHHHHHHHHHTTCSEEEEEESCCCCCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHTTS
T ss_pred ccceecccCCCCHHHHHHHHHHHHHhhHHHHhhccccccCCchhccccccccccccccchhHHHHHHHHHHHHHHHhCCC
Confidence 457777777889999888777664 699999999886432211 1111122222 3455677888889888 4
Q ss_pred ccEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHh
Q psy4398 170 IPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSL 249 (306)
Q Consensus 170 ~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~ 249 (306)
+.+.+-...+|+.+++.++++.+++.++..+- ++ ..+.+++..+++++.+++||.+.-.+.+..+++++++.
T Consensus 222 ~~l~vDan~~~~~~~A~~~~~~l~~~~i~~iE-------eP-~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~ 293 (421)
T 4hnl_A 222 FQMLHDVHERLHPNQAIQFAKAAEPYQLFFLE-------DI-LPPDQSHWLTQLRSQSATPIATGELFNNPMEWQELVKN 293 (421)
T ss_dssp SEEEEECTTCSCHHHHHHHHHHHGGGCCSEEE-------CC-SCGGGGGGHHHHHTTCCCCEEECTTCCSGGGTHHHHHT
T ss_pred ceEeccccccCCHHHHHHHHHHhhhhhhcccc-------cC-CcccchHHHHHHHhcCCCCeecCcceehhHHHHHHHhc
Confidence 56667766689999999999999999998873 22 23457888999999999999998899999999999886
Q ss_pred hhhhccccCCCCCch-------HHHHHHHHHhcCCCC
Q psy4398 250 NCAFLRNHYPVEKLP-------KTILYAHCKYKRFEV 279 (306)
Q Consensus 250 ~v~vGrall~~p~~~-------~~~l~~~~~~~g~~~ 279 (306)
+. .-+-+|... -+.+.+..+++|++.
T Consensus 294 ~a----~d~v~~d~~~~GGite~~~ia~~A~~~gi~v 326 (421)
T 4hnl_A 294 RQ----IDFMRAHVSQIGGITPALKLAHFCDAMGVRI 326 (421)
T ss_dssp TC----CSEECCCGGGGTSHHHHHHHHHHHHHTTCEE
T ss_pred CC----ceEEEeCCCCCCCHHHHHHHHHHHHHCCCeE
Confidence 32 111122111 125667777888773
No 198
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=97.82 E-value=4.7e-05 Score=67.71 Aligned_cols=72 Identities=11% Similarity=0.098 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhC--CCcEEEecCCCCHHHHHHHHHhhh---hhccccC
Q psy4398 184 DTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHL--KIPVIANGGSKEIVDYGGVFSLNC---AFLRNHY 258 (306)
Q Consensus 184 ~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~--~ipvia~GGI~s~~~~~~~l~~~v---~vGrall 258 (306)
+....+...++.|...+-+.... .+.+.++++++++.+ ++||+..|||+|.++++++++.|+ .+|++++
T Consensus 187 ~~~aYa~~gad~G~~lV~LD~~~------~~v~~e~V~~I~~~~~~~iPV~vGGGIrs~Eda~~ll~aGAD~VVVGSAav 260 (286)
T 3vk5_A 187 EIDRYLHVARAFGFHMVYLYSRN------EHVPPEVVRHFRKGLGPDQVLFVSGNVRSGRQVTEYLDSGADYVGFAGALE 260 (286)
T ss_dssp HHHHHHHHHHHTTCSEEEEECSS------SCCCHHHHHHHHHHSCTTCEEEEESSCCSHHHHHHHHHTTCSEEEESGGGS
T ss_pred HHHHHHHHHHHcCCCEEEEcCCC------CcCCHHHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHHcCCCEEEECchhh
Confidence 34677888888999998887432 356889999999999 899999999999999999998754 9999999
Q ss_pred CCC
Q psy4398 259 PVE 261 (306)
Q Consensus 259 ~~p 261 (306)
.|+
T Consensus 261 ~d~ 263 (286)
T 3vk5_A 261 QPD 263 (286)
T ss_dssp STT
T ss_pred cCC
Confidence 993
No 199
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=97.82 E-value=0.00037 Score=65.13 Aligned_cols=125 Identities=17% Similarity=0.206 Sum_probs=96.8
Q ss_pred CceEEEecCCCHHH-HHHHHHHHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhccc--ccEEEEec
Q psy4398 102 NKIILQIGTADPER-ALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLS--IPVSCKIR 177 (306)
Q Consensus 102 ~p~ivql~g~~~~~-~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~--~pv~vKir 177 (306)
.|+...+...++++ ..++++.++ .||..+-+.+|.. +++.-.+.++++|+.++ .++.+...
T Consensus 138 v~~~~t~~~~~~~~~~~~~~~~~~~~G~~~~KiKvg~~---------------~~~~d~~~v~avR~a~g~~~~l~vDaN 202 (382)
T 3dgb_A 138 LPVAWTLASGDTAKDIAEAQKMLDLRRHRIFKLKIGAG---------------EVDRDLAHVIAIKKALGDSASVRVDVN 202 (382)
T ss_dssp EEBCEEECSSCHHHHHHHHHHHHHTTSCSEEEEECCSS---------------CHHHHHHHHHHHHHHHGGGSEEEEECT
T ss_pred eeEEEEecCCChHHHHHHHHHHHHhCCCCEEEEeeCCC---------------CHHHHHHHHHHHHHHcCCCCeEEEeCC
Confidence 34445555556655 555666666 4999999987642 24445677888888874 67888888
Q ss_pred cCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHh
Q psy4398 178 VFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSL 249 (306)
Q Consensus 178 ~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~ 249 (306)
.+|+.+++.++++.+++.|+.+|- ++ ..+.+++..+++++.+++||++...+.+..+++++++.
T Consensus 203 ~~~~~~~A~~~~~~l~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~ 266 (382)
T 3dgb_A 203 QAWDEAVALRACRILGGNGIDLIE-------QP-ISRNNRAGMVRLNASSPAPIMADESIECVEDAFNLARE 266 (382)
T ss_dssp TCBCHHHHHHHHHHHHTTTCCCEE-------CC-BCTTCHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHhhcCcCeee-------CC-CCccCHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHc
Confidence 889999999999999999988873 22 23458999999999999999999999999999998875
No 200
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=97.81 E-value=0.00044 Score=59.87 Aligned_cols=123 Identities=11% Similarity=0.069 Sum_probs=83.5
Q ss_pred HHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEecc---CCChHHHHHHHHH
Q psy4398 115 RALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRV---FHNEADTIALCKR 191 (306)
Q Consensus 115 ~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~---g~~~~~~~~~a~~ 191 (306)
...++.. ++.|+|.|++.+. +|.....+.+.+.+-++++++.++- ..+|+=+ -.+.++....++.
T Consensus 69 k~~E~~~-i~~GAdEID~Vin----------ig~~~~g~~~~v~~ei~~v~~a~~~-~~lKvIlEt~~Lt~eei~~a~~i 136 (226)
T 1vcv_A 69 RIALVSR-LAEVADEIDVVAP----------IGLVKSRRWAEVRRDLISVVGAAGG-RVVKVITEEPYLRDEERYTLYDI 136 (226)
T ss_dssp HHHHHHH-HTTTCSEEEEECC----------HHHHHTTCHHHHHHHHHHHHHHTTT-SEEEEECCGGGCCHHHHHHHHHH
T ss_pred HHHHHHH-HHCCCCEEEEecc----------hhhhcCCCHHHHHHHHHHHHHHHcC-CCceEEEeccCCCHHHHHHHHHH
Confidence 4456666 7789999998633 3433445677888888888887742 2445222 2456778899999
Q ss_pred HHHcCCcEEEEcccCC------CCCCCCCCcHHHHHHHHhh---CC--CcEEEecCCCCHHHHHHHHHh
Q psy4398 192 LEACGIIAIGVHGRTK------AERPRHRNRIEMIRTLTQH---LK--IPVIANGGSKEIVDYGGVFSL 249 (306)
Q Consensus 192 l~~~G~d~i~v~~~~~------~~~~~~p~~~~~v~~i~~~---~~--ipvia~GGI~s~~~~~~~l~~ 249 (306)
..++|+|+|-.+-... .....+.+.++.++.+++. ++ ++|-++|||++.+++.++++.
T Consensus 137 a~eaGADfVKTSTGf~~~~~~~~~~~~~gAt~~dv~lm~~~i~~~g~~v~vKaaGGirt~~~al~~i~a 205 (226)
T 1vcv_A 137 IAEAGAHFIKSSTGFAEEAYAARQGNPVHSTPERAAAIARYIKEKGYRLGVKMAGGIRTREQAKAIVDA 205 (226)
T ss_dssp HHHHTCSEEECCCSCCCHHHHHHTTCCSSCCHHHHHHHHHHHHHHTCCCEEEEESSCCSHHHHHHHHHH
T ss_pred HHHcCCCEEEeCCCCCccccccccCCCCCCCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHH
Confidence 9999999997542211 0000233455666555555 64 999999999999999998887
No 201
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=97.81 E-value=0.00011 Score=63.20 Aligned_cols=72 Identities=18% Similarity=0.253 Sum_probs=54.1
Q ss_pred HHHHHHcCCcEEEEcccC---CCCCCCCCCcHHHHHHHHhhCC-CcEEEecCCCCHHHHHHHHHh---hhhhccccCCCC
Q psy4398 189 CKRLEACGIIAIGVHGRT---KAERPRHRNRIEMIRTLTQHLK-IPVIANGGSKEIVDYGGVFSL---NCAFLRNHYPVE 261 (306)
Q Consensus 189 a~~l~~~G~d~i~v~~~~---~~~~~~~p~~~~~v~~i~~~~~-ipvia~GGI~s~~~~~~~l~~---~v~vGrall~~p 261 (306)
++.+.+.|+|++.+.... ....+..+..|+.++++++.++ +||++.|||+ ++++.++++. ++.+|++++..+
T Consensus 129 ~~~a~~~g~d~v~~~~v~~t~~~~~~~~~~~~~~l~~~~~~~~~~pvia~GGI~-~~nv~~~~~~Ga~gv~vgs~i~~~~ 207 (227)
T 2tps_A 129 VKQAEEDGADYVGLGPIYPTETKKDTRAVQGVSLIEAVRRQGISIPIVGIGGIT-IDNAAPVIQAGADGVSMISAISQAE 207 (227)
T ss_dssp HHHHHHHTCSEEEECCSSCCCSSSSCCCCCTTHHHHHHHHTTCCCCEEEESSCC-TTTSHHHHHTTCSEEEESHHHHTSS
T ss_pred HHHHHhCCCCEEEECCCcCCCCCCCCCCccCHHHHHHHHHhCCCCCEEEEcCCC-HHHHHHHHHcCCCEEEEhHHhhcCC
Confidence 455667899999973211 1111123457899999999887 9999999999 8999888876 459999998654
No 202
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=97.80 E-value=0.00038 Score=59.02 Aligned_cols=145 Identities=12% Similarity=0.151 Sum_probs=84.1
Q ss_pred CCceEEEecCCC-HHHHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEeccC
Q psy4398 101 KNKIILQIGTAD-PERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVF 179 (306)
Q Consensus 101 ~~p~ivql~g~~-~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g 179 (306)
+.|+++-+...+ ++.+.+.+ ++.|+|+|-+|.... .+.+.++++.+++. +.++.+-+. .
T Consensus 53 ~~~i~~~l~~~di~~~~~~~a--~~~Gad~v~vh~~~~----------------~~~~~~~~~~~~~~-g~~~gv~~~-s 112 (207)
T 3ajx_A 53 DKIVFADMKTMDAGELEADIA--FKAGADLVTVLGSAD----------------DSTIAGAVKAAQAH-NKGVVVDLI-G 112 (207)
T ss_dssp TSEEEEEEEECSCHHHHHHHH--HHTTCSEEEEETTSC----------------HHHHHHHHHHHHHH-TCEEEEECT-T
T ss_pred CCeEEEEEEecCccHHHHHHH--HhCCCCEEEEeccCC----------------hHHHHHHHHHHHHc-CCceEEEEe-c
Confidence 457887766567 76655322 235999999985531 12344555555542 444433232 1
Q ss_pred C-ChHHHHHHHHHHHHcCCcEEEEc-ccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhh---hhhc
Q psy4398 180 H-NEADTIALCKRLEACGIIAIGVH-GRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLN---CAFL 254 (306)
Q Consensus 180 ~-~~~~~~~~a~~l~~~G~d~i~v~-~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~---v~vG 254 (306)
+ +++ +.++.+++.|+|++.++ +.+.......+.. +.++++++. ++|+++.|||+ ++++.++++.| +.+|
T Consensus 113 ~~~p~---~~~~~~~~~g~d~v~~~~~~~~~~~g~~~~~-~~i~~~~~~-~~pi~v~GGI~-~~~~~~~~~aGad~vvvG 186 (207)
T 3ajx_A 113 IEDKA---TRAQEVRALGAKFVEMHAGLDEQAKPGFDLN-GLLAAGEKA-RVPFSVAGGVK-VATIPAVQKAGAEVAVAG 186 (207)
T ss_dssp CSSHH---HHHHHHHHTTCSEEEEECCHHHHTSTTCCTH-HHHHHHHHH-TSCEEEESSCC-GGGHHHHHHTTCSEEEES
T ss_pred CCChH---HHHHHHHHhCCCEEEEEecccccccCCCchH-HHHHHhhCC-CCCEEEECCcC-HHHHHHHHHcCCCEEEEe
Confidence 2 223 23455566799999443 3321100011223 555555544 78999999998 78888888875 4999
Q ss_pred cccCCCCCchHHHHHHHH
Q psy4398 255 RNHYPVEKLPKTILYAHC 272 (306)
Q Consensus 255 rall~~p~~~~~~l~~~~ 272 (306)
|+++..+. +....+++.
T Consensus 187 saI~~~~d-p~~~~~~~~ 203 (207)
T 3ajx_A 187 GAIYGAAD-PAAAAKELR 203 (207)
T ss_dssp HHHHTSSS-HHHHHHHHH
T ss_pred eeccCCCC-HHHHHHHHH
Confidence 99987443 333444443
No 203
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=97.79 E-value=4.6e-05 Score=66.96 Aligned_cols=139 Identities=15% Similarity=0.134 Sum_probs=97.4
Q ss_pred ceEEEecCCCHHHHHHHHHHHhc-CCCEEEEcc----CCCccccccCCccccccCChHHHHHHHHHHHhcc-cccEEEEe
Q psy4398 103 KIILQIGTADPERALEAAKKVEH-DVAAIDINM----GCPKQFSLTGGMGAALLSTPDIACNILTTLISNL-SIPVSCKI 176 (306)
Q Consensus 103 p~ivql~g~~~~~~~~aa~~~~~-g~d~veln~----gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKi 176 (306)
.+..+|...|...+.+..+.+++ |+|.+-+-. -.|+- .+| .++++++|+.. +.|+.+.+
T Consensus 29 ~i~pSilsaD~~~L~~~i~~l~~~G~d~lHvDVmDg~FVpni-----t~G----------~~~v~~lr~~~p~~~ldvHL 93 (246)
T 3inp_A 29 QINPSILSADLARLGDDVKAVLAAGADNIHFDVMDNHYVPNL-----TFG----------PMVLKALRDYGITAGMDVHL 93 (246)
T ss_dssp EEEEBGGGSCGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSCB-----CCC----------HHHHHHHHHHTCCSCEEEEE
T ss_pred eeehhhhcCChhhHHHHHHHHHHcCCCEEEEEecCCCcCcch-----hcC----------HHHHHHHHHhCCCCeEEEEE
Confidence 57778888888888888888875 888655532 24542 233 35788888887 88999988
Q ss_pred ccCCChHHHHHHHHHHHHcCCcEEEEcccC--------------------------C-------------------CCCC
Q psy4398 177 RVFHNEADTIALCKRLEACGIIAIGVHGRT--------------------------K-------------------AERP 211 (306)
Q Consensus 177 r~g~~~~~~~~~a~~l~~~G~d~i~v~~~~--------------------------~-------------------~~~~ 211 (306)
-.. ++ .++++.+.++|+|.+++|.-. . ..++
T Consensus 94 mv~-~p---~~~i~~~~~aGAd~itvH~Ea~~~~~~~i~~ir~~G~k~Gvalnp~Tp~e~l~~~l~~vD~VlvMsV~PGf 169 (246)
T 3inp_A 94 MVK-PV---DALIESFAKAGATSIVFHPEASEHIDRSLQLIKSFGIQAGLALNPATGIDCLKYVESNIDRVLIMSVNPGF 169 (246)
T ss_dssp ECS-SC---HHHHHHHHHHTCSEEEECGGGCSCHHHHHHHHHTTTSEEEEEECTTCCSGGGTTTGGGCSEEEEECSCTTC
T ss_pred eeC-CH---HHHHHHHHHcCCCEEEEccccchhHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHhcCCEEEEeeecCCC
Confidence 741 22 346677888999999987521 0 0011
Q ss_pred C----CCCcHHHHHHHHhhC-----CCcEEEecCCCCHHHHHHHHHhhh---hhccccCCCC
Q psy4398 212 R----HRNRIEMIRTLTQHL-----KIPVIANGGSKEIVDYGGVFSLNC---AFLRNHYPVE 261 (306)
Q Consensus 212 ~----~p~~~~~v~~i~~~~-----~ipvia~GGI~s~~~~~~~l~~~v---~vGrall~~p 261 (306)
. .|..++-++++++.. +++|..-|||+ .+++.+++++|+ .+||+++..+
T Consensus 170 gGQ~fi~~~l~KI~~lr~~~~~~~~~~~I~VDGGI~-~~ti~~~~~aGAD~~V~GSaIf~a~ 230 (246)
T 3inp_A 170 GGQKFIPAMLDKAKEISKWISSTDRDILLEIDGGVN-PYNIAEIAVCGVNAFVAGSAIFNSD 230 (246)
T ss_dssp --CCCCTTHHHHHHHHHHHHHHHTSCCEEEEESSCC-TTTHHHHHTTTCCEEEESHHHHTSS
T ss_pred CCcccchHHHHHHHHHHHHHHhcCCCeeEEEECCcC-HHHHHHHHHcCCCEEEEehHHhCCC
Confidence 1 134567777777653 58899999998 788999998876 8999998755
No 204
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=97.77 E-value=5.7e-05 Score=66.11 Aligned_cols=131 Identities=12% Similarity=0.054 Sum_probs=86.9
Q ss_pred HHHHHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEecc------CC------C--hH
Q psy4398 119 AAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRV------FH------N--EA 183 (306)
Q Consensus 119 aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~------g~------~--~~ 183 (306)
+++.+. .|+|.|||-.+ ..-+.+.+.++++++|+ .++|+.+-... |. + .+
T Consensus 25 ~~~~l~~~GaD~ielG~S--------------~Gvt~~~~~~~v~~ir~-~~~Pivlm~y~~n~i~~G~dg~iiPdLp~e 89 (240)
T 1viz_A 25 QLEILCESGTDAVIIGGS--------------DGVTEDNVLRMMSKVRR-FLVPCVLEVSAIEAIVPGFDLYFIPSVLNS 89 (240)
T ss_dssp HHHHHHTSCCSEEEECC------------------CHHHHHHHHHHHTT-SSSCEEEECSCGGGCCSCCSEEEEEEETTB
T ss_pred HHHHHHHcCCCEEEECCC--------------CCCCHHHHHHHHHHhhC-cCCCEEEecCccccccCCCCEEEEcccCcc
Confidence 345444 59999999642 23467788999999998 78898863221 21 1 11
Q ss_pred HHHHH-----HHHHHHcC-----CcEEE----Ec-ccCC---------------------------------CCCCCCCC
Q psy4398 184 DTIAL-----CKRLEACG-----IIAIG----VH-GRTK---------------------------------AERPRHRN 215 (306)
Q Consensus 184 ~~~~~-----a~~l~~~G-----~d~i~----v~-~~~~---------------------------------~~~~~~p~ 215 (306)
+..++ .+.+.+.| .+.+- +- ..+. .. ...+.
T Consensus 90 e~~~~~~g~~~~a~~~~g~~~~~l~~i~~gy~l~~P~~~~~rl~~~d~~~~~~~~~~~a~~g~~~~~~~VYl~s-~G~~~ 168 (240)
T 1viz_A 90 KNADWIVGMHQKAMKEYGELMSMEEIVAEGYCIANPDCKAAALTEADADLNMDDIVAYARVSELLQLPIFYLEY-SGVLG 168 (240)
T ss_dssp SSGGGTTHHHHHHHHHCHHHHHHSCEEEEEEEECCTTSHHHHHTTBCCCCCHHHHHHHHHHHHHTTCSEEEEEC-TTSCC
T ss_pred cChhhhcchhHHHHHHcCCCCcceeeeecccEEECCCCceEEeeccCCCCCHHHHHHHHHhCcccCCCEEEEeC-CCccC
Confidence 12233 45567777 66664 31 1000 00 01144
Q ss_pred cHHHHHHHHhhC-CCcEEEecCCCCHHHHHHHHHh--hhhhccccCCCCC-chH
Q psy4398 216 RIEMIRTLTQHL-KIPVIANGGSKEIVDYGGVFSL--NCAFLRNHYPVEK-LPK 265 (306)
Q Consensus 216 ~~~~v~~i~~~~-~ipvia~GGI~s~~~~~~~l~~--~v~vGrall~~p~-~~~ 265 (306)
+.++++++++.+ ++|++..|||+|+++++++++- ++.+|+++..+|. +.+
T Consensus 169 ~~~~i~~i~~~~~~~Pv~vGgGI~t~e~a~~~~~gAd~VIVGSa~v~~~~~~~~ 222 (240)
T 1viz_A 169 DIEAVKKTKAVLETSTLFYGGGIKDAETAKQYAEHADVIVVGNAVYEDFDRALK 222 (240)
T ss_dssp CHHHHHHHHHTCSSSEEEEESSCCSHHHHHHHHTTCSEEEECTHHHHCHHHHHT
T ss_pred hHHHHHHHHHhcCCCCEEEEeccCCHHHHHHHHhCCCEEEEChHHHhCHHHHHH
Confidence 789999999999 9999999999999999999881 3599999999874 443
No 205
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=97.77 E-value=0.00012 Score=63.75 Aligned_cols=48 Identities=13% Similarity=0.111 Sum_probs=42.2
Q ss_pred CCcHHHHHHHHhhC-CCcEEEecCCCCHHHHHHHHHh--hhhhccccCCCC
Q psy4398 214 RNRIEMIRTLTQHL-KIPVIANGGSKEIVDYGGVFSL--NCAFLRNHYPVE 261 (306)
Q Consensus 214 p~~~~~v~~i~~~~-~ipvia~GGI~s~~~~~~~l~~--~v~vGrall~~p 261 (306)
+.+.++++++++.+ ++|++..|||+|+++++++++- ++.+|++++.+|
T Consensus 175 ~~~~~~i~~i~~~~~~~Pv~vGgGI~s~e~a~~~~~gAd~VIVGSa~v~~~ 225 (234)
T 2f6u_A 175 YGNPELVAEVKKVLDKARLFYGGGIDSREKAREMLRYADTIIVGNVIYEKG 225 (234)
T ss_dssp CCCHHHHHHHHHHCSSSEEEEESCCCSHHHHHHHHHHSSEEEECHHHHHHC
T ss_pred cchHHHHHHHHHhCCCCCEEEEecCCCHHHHHHHHhCCCEEEEChHHHhCH
Confidence 34789999999999 9999999999999999999881 359999998765
No 206
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=97.76 E-value=0.00019 Score=67.50 Aligned_cols=121 Identities=12% Similarity=0.091 Sum_probs=95.2
Q ss_pred CceEEEec-CCC--HHHHHHHHHHHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEE
Q psy4398 102 NKIILQIG-TAD--PERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCK 175 (306)
Q Consensus 102 ~p~ivql~-g~~--~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vK 175 (306)
.|+-.+++ ..+ ++++++.++.+. +||..+.++++ |. .+ .+.++++|+.+ ++++.+.
T Consensus 150 v~~~~s~g~~~~~~~e~~~~~a~~~~~~G~~~iKlKv~-~~-------------~d----~~~v~avR~a~G~~~~L~vD 211 (400)
T 3mwc_A 150 IESGAALGIPEDGRIETLIHQVEESLQEGYRRIKIKIK-PG-------------WD----VEPLQETRRAVGDHFPLWTD 211 (400)
T ss_dssp EEBCEEECCCTTCCHHHHHHHHHHHHHHTCSCEEEECB-TT-------------BS----HHHHHHHHHHHCTTSCEEEE
T ss_pred EEeeEEeccCCCCCHHHHHHHHHHHHHcCCCEEEEEeC-cc-------------hH----HHHHHHHHHhcCCCCEEEEe
Confidence 45556664 335 888888777654 59999999873 11 22 45677888877 5788888
Q ss_pred eccCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHh
Q psy4398 176 IRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSL 249 (306)
Q Consensus 176 ir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~ 249 (306)
...+|+.++ .++++.+++.|+++|- ++ ..+.+++..+++++.+++||++...+.+..+++++++.
T Consensus 212 aN~~w~~~~-~~~~~~l~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~ 276 (400)
T 3mwc_A 212 ANSSFELDQ-WETFKAMDAAKCLFHE-------QP-LHYEALLDLKELGERIETPICLDESLISSRVAEFVAKL 276 (400)
T ss_dssp CTTCCCGGG-HHHHHHHGGGCCSCEE-------SC-SCTTCHHHHHHHHHHSSSCEEESTTCCSHHHHHHHHHT
T ss_pred CCCCCCHHH-HHHHHHHHhcCCCEEe-------CC-CChhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHhc
Confidence 888899999 9999999999998884 22 23457899999999999999999999999999999875
No 207
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=97.76 E-value=0.00044 Score=60.18 Aligned_cols=118 Identities=13% Similarity=0.110 Sum_probs=76.3
Q ss_pred HHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc---cccEEEEeccC-CChHHHHHHHHH
Q psy4398 116 ALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL---SIPVSCKIRVF-HNEADTIALCKR 191 (306)
Q Consensus 116 ~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~---~~pv~vKir~g-~~~~~~~~~a~~ 191 (306)
..++...++.|+|.|++.+. +|.... .+.+-+.++++.+ +.|+-|=+-.+ .+.++....++.
T Consensus 91 ~~e~~~Av~~GAdEID~vin----------ig~~~~----~v~~ei~~v~~a~~~~g~~lKvIlEt~~L~~e~i~~a~ri 156 (234)
T 1n7k_A 91 LVEAQTVLEAGATELDVVPH----------LSLGPE----AVYREVSGIVKLAKSYGAVVKVILEAPLWDDKTLSLLVDS 156 (234)
T ss_dssp HHHHHHHHHHTCCEEEECCC----------GGGCHH----HHHHHHHHHHHHHHHTTCEEEEECCGGGSCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEecc----------chHHHH----HHHHHHHHHHHHHhhcCCeEEEEEeccCCCHHHHHHHHHH
Confidence 34444445569999998643 232222 4444445555554 34542222222 356778899999
Q ss_pred HHHcCCcEEEEcccCCCCCCC-CCCcHHHHHH--HHhhCCCcEEEecCCCCHHHHHHHHHhhh
Q psy4398 192 LEACGIIAIGVHGRTKAERPR-HRNRIEMIRT--LTQHLKIPVIANGGSKEIVDYGGVFSLNC 251 (306)
Q Consensus 192 l~~~G~d~i~v~~~~~~~~~~-~p~~~~~v~~--i~~~~~ipvia~GGI~s~~~~~~~l~~~v 251 (306)
..++|+|+|-.+-. ... +.+..+.++. +++.+++||-++|||++.+++.++++.|.
T Consensus 157 a~eaGADfVKTsTG----~~~~~gAt~~dv~l~~m~~~v~v~VKaaGGirt~~~al~~i~aGa 215 (234)
T 1n7k_A 157 SRRAGADIVKTSTG----VYTKGGDPVTVFRLASLAKPLGMGVKASGGIRSGIDAVLAVGAGA 215 (234)
T ss_dssp HHHTTCSEEESCCS----SSCCCCSHHHHHHHHHHHGGGTCEEEEESSCCSHHHHHHHHHTTC
T ss_pred HHHhCCCEEEeCCC----CCCCCCCCHHHHHHHHHHHHHCCCEEEecCCCCHHHHHHHHHcCc
Confidence 99999999975321 111 2345566666 77777799999999999999999998755
No 208
>4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans}
Probab=97.74 E-value=0.00032 Score=65.84 Aligned_cols=148 Identities=9% Similarity=0.112 Sum_probs=108.7
Q ss_pred CceEEEecCCCHHHHHHHHHHH-hcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhccc---ccEEEEec
Q psy4398 102 NKIILQIGTADPERALEAAKKV-EHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLS---IPVSCKIR 177 (306)
Q Consensus 102 ~p~ivql~g~~~~~~~~aa~~~-~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~---~pv~vKir 177 (306)
.|+-..+...+++++.+.++.+ ++||..+-+++|++ +++.-.+.++++|+.++ +++.+...
T Consensus 154 v~~y~s~~~~~~e~~~~~a~~~~~~G~~~~KlKvg~~---------------~~~~d~~~v~avR~a~gg~~~~L~vDaN 218 (391)
T 4e8g_A 154 VPSYYATGIGQPDEIARIAAEKVAEGFPRLQIKIGGR---------------PVEIDIETVRKVWERIRGTGTRLAVDGN 218 (391)
T ss_dssp EECCEEECSCCHHHHHHHHHHHHHTTCSEEEEECCSS---------------CHHHHHHHHHHHHHHHTTTTCEEEEECT
T ss_pred EEEeEEcCCCCHHHHHHHHHHHHHcCCcEEEEcCCCC---------------CHHHHHHHHHHHHHHhCCCCCeEEEeCC
Confidence 4566677778899988877765 46999999998763 24445667888877763 56788887
Q ss_pred cCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhhhhcccc
Q psy4398 178 VFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNCAFLRNH 257 (306)
Q Consensus 178 ~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v~vGral 257 (306)
.+|+.+++.++++.+++.++ +|- ++ ..+++..+++++.+++||.+.-.+.+..+++++++.+. .-
T Consensus 219 ~~w~~~~A~~~~~~L~~~~i-~iE-------eP---~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~a----~d 283 (391)
T 4e8g_A 219 RSLPSRDALRLSRECPEIPF-VLE-------QP---CNTLEEIAAIRGRVQHGIYLDESGEDLSTVIRAAGQGL----CD 283 (391)
T ss_dssp TCCCHHHHHHHHHHCTTSCE-EEE-------SC---SSSHHHHHHHGGGCCSCEEESTTCCSHHHHHHHHHTTC----CS
T ss_pred CCCCHHHHHHHHHHHhhcCe-EEe-------cC---CccHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCC----CC
Confidence 78999999999999999887 652 22 24789999999999999999999999999999987532 00
Q ss_pred CCCCCc-------hHHHHHHHHHhcCCCC
Q psy4398 258 YPVEKL-------PKTILYAHCKYKRFEV 279 (306)
Q Consensus 258 l~~p~~-------~~~~l~~~~~~~g~~~ 279 (306)
+-+|.. .-+.+.+..+++|++.
T Consensus 284 ~v~ik~~~~GGit~~~~ia~~A~~~gi~~ 312 (391)
T 4e8g_A 284 GFGMKLTRIGGLQQMAAFRDICEARALPH 312 (391)
T ss_dssp EEEEEHHHHTSHHHHHHHHHHHHHTTCCE
T ss_pred EEEeCccccCCHHHHHHHHHHHHHcCCeE
Confidence 111111 1125666777788773
No 209
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=97.74 E-value=0.0003 Score=62.14 Aligned_cols=127 Identities=10% Similarity=0.085 Sum_probs=84.9
Q ss_pred HHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccc-cEEEEecc--C-CChHH-HHHHHH
Q psy4398 116 ALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSI-PVSCKIRV--F-HNEAD-TIALCK 190 (306)
Q Consensus 116 ~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~-pv~vKir~--g-~~~~~-~~~~a~ 190 (306)
..++...++.|+|.|++.+. +|.....+.+.+.+-++++++.++. +..+|+=+ + .+.++ ....++
T Consensus 88 v~E~~~Av~~GAdEIDmVin----------ig~l~~g~~~~v~~ei~~v~~a~~~~g~~lKvIlEt~~L~d~e~i~~a~~ 157 (260)
T 1p1x_A 88 LAETRAAIAYGADEVDVVFP----------YRALMAGNEQVGFDLVKACKEACAAANVLLKVIIETGELKDEALIRKASE 157 (260)
T ss_dssp HHHHHHHHHHTCSEEEEECC----------HHHHHTTCCHHHHHHHHHHHHHHHHTTCEEEEECCHHHHCSHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEecc----------HHhhhCCCHHHHHHHHHHHHHHhcccCCeEEEEEecccCCcHHHHHHHHH
Confidence 34444445679999998543 3333345667777777888877642 34555443 1 23344 678999
Q ss_pred HHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhh-----C--CCcEEEecCCCCHHHHHHHHHhhh-hhccc
Q psy4398 191 RLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQH-----L--KIPVIANGGSKEIVDYGGVFSLNC-AFLRN 256 (306)
Q Consensus 191 ~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~-----~--~ipvia~GGI~s~~~~~~~l~~~v-~vGra 256 (306)
...++|+|+|-.+- +...+.+..+.++.+++. + +++|-++|||++.+++.++++.+. .+|..
T Consensus 158 ia~eaGADfVKTST----Gf~~~gAt~e~v~lm~~~I~~~~~g~~v~VKaaGGIrt~~~al~~i~aga~~lG~~ 227 (260)
T 1p1x_A 158 ISIKAGADFIKTST----GKVAVNATPESARIMMEVIRDMGVEKTVGFKPAGGVRTAEDAQKYLAIADELFGAD 227 (260)
T ss_dssp HHHHTTCSEEECCC----SCSSCCCCHHHHHHHHHHHHHHTCTTTCEEECBSSCCSHHHHHHHHHHHHHHHCTT
T ss_pred HHHHhCCCEEEeCC----CCCCCCCCHHHHHHHHHHHHHhcCCCCceEEEeCCCCCHHHHHHHHHhhhhhcccc
Confidence 99999999997542 122234566755555555 3 689999999999999999999876 45554
No 210
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=97.71 E-value=0.00097 Score=62.23 Aligned_cols=125 Identities=13% Similarity=0.198 Sum_probs=94.9
Q ss_pred CceEEEecCCCHHHH-HHHHHHHhc-CCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhccc--ccEEEEec
Q psy4398 102 NKIILQIGTADPERA-LEAAKKVEH-DVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLS--IPVSCKIR 177 (306)
Q Consensus 102 ~p~ivql~g~~~~~~-~~aa~~~~~-g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~--~pv~vKir 177 (306)
.|+...+...++++. .++++.+++ ||..+-+.+|+. +++.-.+.++++|+.++ +++.+...
T Consensus 137 v~~~~t~~~~~~~~~~~~~~~~~~~~G~~~~KiKvg~~---------------~~~~d~~~v~avR~a~g~~~~l~vDaN 201 (381)
T 3fcp_A 137 LPVLWTLASGDTAKDIAEGEKLLAEGRHRAFKLKIGAR---------------ELATDLRHTRAIVEALGDRASIRVDVN 201 (381)
T ss_dssp EEBCEEECSSCHHHHHHHHHHHTC----CEEEEECCSS---------------CHHHHHHHHHHHHHHTCTTCEEEEECT
T ss_pred eeeEEEecCCChHHHHHHHHHHHHhCCCCEEEEecCCC---------------ChHHHHHHHHHHHHHcCCCCeEEEECC
Confidence 455555655566654 445555564 899999987652 34555678899999884 67888888
Q ss_pred cCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHh
Q psy4398 178 VFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSL 249 (306)
Q Consensus 178 ~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~ 249 (306)
.+|+.+++.++++.+++.|+.+|- ++. .+.+++..+++++.+++||++...+.+..+++++++.
T Consensus 202 ~~~~~~~A~~~~~~l~~~~i~~iE-------eP~-~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~ 265 (381)
T 3fcp_A 202 QAWDAATGAKGCRELAAMGVDLIE-------QPV-SAHDNAALVRLSQQIETAILADEAVATAYDGYQLAQQ 265 (381)
T ss_dssp TCBCHHHHHHHHHHHHHTTCSEEE-------CCB-CTTCHHHHHHHHHHSSSEEEESTTCCSHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHhhcCcccee-------CCC-CcccHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHc
Confidence 789999999999999999998883 222 3458999999999999999999999999999998875
No 211
>4a35_A Mitochondrial enolase superfamily member 1; isomerase; 1.74A {Homo sapiens}
Probab=97.69 E-value=0.0014 Score=62.34 Aligned_cols=148 Identities=9% Similarity=0.027 Sum_probs=108.7
Q ss_pred CCCHHHHHHHHHHHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEeccCCChHHHH
Q psy4398 110 TADPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIRVFHNEADTI 186 (306)
Q Consensus 110 g~~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~ 186 (306)
+.+++++++.++.+. +||..+-+++|+ +++.-.+.++++|+.+ ++++.+....+|+.+++.
T Consensus 199 ~~~~e~~~~~a~~~~~~Gf~~~KlKvG~----------------~~~~d~~~v~avR~a~G~~~~l~vDaN~~~~~~~A~ 262 (441)
T 4a35_A 199 GYSDDTLKQLCAQALKDGWTRFKVKVGA----------------DLQDDMRRCQIIRDMIGPEKTLMMDANQRWDVPEAV 262 (441)
T ss_dssp TCCHHHHHHHHHHHHHTTCCEEEEECSS----------------CHHHHHHHHHHHHHHHCTTSEEEEECTTCCCHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEcCCC----------------CHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHH
Confidence 458899988887664 599999998764 3445566788888887 467888888789999999
Q ss_pred HHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhh---CCCcEEEecCCCCHHHHHHHHHhhhhhccccCCCC-C
Q psy4398 187 ALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQH---LKIPVIANGGSKEIVDYGGVFSLNCAFLRNHYPVE-K 262 (306)
Q Consensus 187 ~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~---~~ipvia~GGI~s~~~~~~~l~~~v~vGrall~~p-~ 262 (306)
++++.+++.++.+|- ++. .+.+++..+++++. +++||.+.-.+.+..++.++++.+. ...+.-++ .
T Consensus 263 ~~~~~L~~~~~~~iE-------eP~-~~~d~~~~~~l~~~l~~~~iPIa~gE~~~~~~~~~~~l~~~a--~div~~d~~~ 332 (441)
T 4a35_A 263 EWMSKLAKFKPLWIE-------EPT-SPDDILGHATISKALVPLGIGIATGEQCHNRVIFKQLLQAKA--LQFLQIDSCR 332 (441)
T ss_dssp HHHHHHGGGCCSEEE-------CCS-CTTCHHHHHHHHHHHGGGTCEEEECTTCCSHHHHHHHHHTTC--CSEECCCTTT
T ss_pred HHHHhhcccCccEEe-------CCC-CcccHHHHHHHHHhccCCCCCEEeCCccccHHHHHHHHHcCC--CCEEEECccc
Confidence 999999999988883 222 34578888999987 7899999999999999999887532 00111122 2
Q ss_pred ch----HHHHHHHHHhcCCCCCcce
Q psy4398 263 LP----KTILYAHCKYKRFEVPKYE 283 (306)
Q Consensus 263 ~~----~~~l~~~~~~~g~~~~~~~ 283 (306)
+. -+.+.+..+++|+++..+.
T Consensus 333 ~GGit~~~kia~lA~~~gv~v~~H~ 357 (441)
T 4a35_A 333 LGSVNENLSVLLMAKKFEIPVCPHA 357 (441)
T ss_dssp SSHHHHHHHHHHHHHHTTCCBCCCC
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEeC
Confidence 21 1266777888888865543
No 212
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=97.69 E-value=0.00056 Score=64.53 Aligned_cols=149 Identities=10% Similarity=0.093 Sum_probs=102.2
Q ss_pred HHHHH-HhcCCCEEEEccCCCccccccCCccccc-cCChHHHHHHHHHHHhcc--cccEEEEeccCCChHHHHHHHHHHH
Q psy4398 118 EAAKK-VEHDVAAIDINMGCPKQFSLTGGMGAAL-LSTPDIACNILTTLISNL--SIPVSCKIRVFHNEADTIALCKRLE 193 (306)
Q Consensus 118 ~aa~~-~~~g~d~veln~gcP~~~~~~~~~G~~l-~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~~a~~l~ 193 (306)
+.++. +++||..+-++-..+. . .+-|... ..+++...+.++++|+++ ++++.+....+|+.+++.++++.|+
T Consensus 162 ~~a~~~~~~G~~~~K~~~~~~~---~-~K~G~~~~~~~~~~d~e~v~avR~a~g~d~~l~vDaN~~~~~~~A~~~~~~L~ 237 (410)
T 3dip_A 162 VLAESLVAEGYAAMKIWPFDDF---A-SITPHHISLTDLKDGLEPFRKIRAAVGQRIEIMCELHSLWGTHAAARICNALA 237 (410)
T ss_dssp HHHHHHHHTTCSEEEECTTHHH---H-TTCTTCCCHHHHHHHHHHHHHHHHHHTTSSEEEEECTTCBCHHHHHHHHHHGG
T ss_pred HHHHHHHHcCCCEEEECCccCc---c-ccccCcCCHHHHHHHHHHHHHHHHHcCCCceEEEECCCCCCHHHHHHHHHHHH
Confidence 33443 3469999999521111 0 1122211 113556788999999988 4688888888899999999999999
Q ss_pred HcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhhhhccccCCCC-C----chHHHH
Q psy4398 194 ACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNCAFLRNHYPVE-K----LPKTIL 268 (306)
Q Consensus 194 ~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v~vGrall~~p-~----~~~~~l 268 (306)
+.|+++|. ++...+.+++..+++++.+++||++.+.+.+.++++++++.+.. ..+.-++ . ..-+.+
T Consensus 238 ~~~i~~iE-------qP~~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~--d~v~~k~~~~GGit~~~~i 308 (410)
T 3dip_A 238 DYGVLWVE-------DPIAKMDNIPAVADLRRQTRAPICGGENLAGTRRFHEMLCADAI--DFVMLDLTWCGGLSEGRKI 308 (410)
T ss_dssp GGTCSEEE-------CCBSCTTCHHHHHHHHHHHCCCEEECTTCCSHHHHHHHHHTTCC--SEEEECTTTSSCHHHHHHH
T ss_pred hcCCCEEE-------CCCCCcccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCC--CeEeecccccCCHHHHHHH
Confidence 99999886 22023457899999999999999999999999999999886320 0011122 1 122366
Q ss_pred HHHHHhcCCCC
Q psy4398 269 YAHCKYKRFEV 279 (306)
Q Consensus 269 ~~~~~~~g~~~ 279 (306)
.+..+++|++.
T Consensus 309 a~~A~~~gi~~ 319 (410)
T 3dip_A 309 AALAETHARPL 319 (410)
T ss_dssp HHHHHHTTCCE
T ss_pred HHHHHHcCCEE
Confidence 77788888874
No 213
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=97.69 E-value=0.0004 Score=61.96 Aligned_cols=126 Identities=12% Similarity=0.069 Sum_probs=80.7
Q ss_pred HHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChH---HHHHHHHHHHhcccccEEEEecc--C-CChHH-HHHH
Q psy4398 116 ALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPD---IACNILTTLISNLSIPVSCKIRV--F-HNEAD-TIAL 188 (306)
Q Consensus 116 ~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~---~~~eiv~~v~~~~~~pv~vKir~--g-~~~~~-~~~~ 188 (306)
..++...++.|+|.|++-+. +|.....+.+ .+.+-++++++.++ ...+|+=+ + .+.++ ....
T Consensus 109 v~E~~~Av~~GAdEIDmVin----------ig~lksg~~~~~~~v~~eI~~v~~a~~-~~~lKVIlEt~~L~d~e~i~~A 177 (281)
T 2a4a_A 109 LNDTEKALDDGADEIDLVIN----------YKKIIENTDEGLKEATKLTQSVKKLLT-NKILKVIIEVGELKTEDLIIKT 177 (281)
T ss_dssp HHHHHHHHHHTCSEEEEECC----------HHHHHHSHHHHHHHHHHHHHHHHTTCT-TSEEEEECCHHHHCSHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEecc----------hHhhhCCChhHHHHHHHHHHHHHHHhc-CCceEEEEecccCCcHHHHHHH
Confidence 34444455679999998532 3333334556 77778888888874 24555443 1 23344 6688
Q ss_pred HHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhh------------CCCcEEEecCCCCHHHHHHHHHhhh-hhcc
Q psy4398 189 CKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQH------------LKIPVIANGGSKEIVDYGGVFSLNC-AFLR 255 (306)
Q Consensus 189 a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~------------~~ipvia~GGI~s~~~~~~~l~~~v-~vGr 255 (306)
++...++|+|+|-.+-. ...+.+.++.++.+++. .+++|-++|||+|.+++.++++.+. .+|.
T Consensus 178 ~~ia~eaGADfVKTSTG----f~~~gAT~edv~lm~~~v~~~~~~~~~tg~~vgVKaaGGIrt~e~al~~i~aga~~lG~ 253 (281)
T 2a4a_A 178 TLAVLNGNADFIKTSTG----KVQINATPSSVEYIIKAIKEYIKNNPEKNNKIGLKVSGGISDLNTASHYILLARRFLSS 253 (281)
T ss_dssp HHHHHTTTCSEEECCCS----CSSCCCCHHHHHHHHHHHHHHHHHCGGGTTCCEEEEESSCCSHHHHHHHHHHHHHHTC-
T ss_pred HHHHHHhCCCEEEeCCC----CCCCCCCHHHHHHHHHHHHHhhcccccCCCCceEEEeCCCCCHHHHHHHHHHhhhhccc
Confidence 99999999999975422 11123344444333333 2689999999999999999998776 4554
Q ss_pred c
Q psy4398 256 N 256 (306)
Q Consensus 256 a 256 (306)
.
T Consensus 254 ~ 254 (281)
T 2a4a_A 254 L 254 (281)
T ss_dssp -
T ss_pred c
Confidence 3
No 214
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=97.67 E-value=0.00025 Score=66.47 Aligned_cols=97 Identities=10% Similarity=0.162 Sum_probs=73.6
Q ss_pred ChHHHHHHHHHHHhcccccEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCC-CcHHHHHHHHhhCCCcE
Q psy4398 153 TPDIACNILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHR-NRIEMIRTLTQHLKIPV 231 (306)
Q Consensus 153 ~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p-~~~~~v~~i~~~~~ipv 231 (306)
+++.+.++++++++. +.++.++++. . ...+.++.+.++|+|.+.+++....+.+..+ ..|+.+.++++.+++||
T Consensus 140 d~~~~~~~i~~~~~~-g~~v~~~v~~--~--~~~e~a~~~~~agad~i~i~~~~~~~~~~~~~~~~~~i~~l~~~~~~pv 214 (393)
T 2qr6_A 140 DTELLSERIAQVRDS-GEIVAVRVSP--Q--NVREIAPIVIKAGADLLVIQGTLISAEHVNTGGEALNLKEFIGSLDVPV 214 (393)
T ss_dssp CHHHHHHHHHHHHHT-TSCCEEEECT--T--THHHHHHHHHHTTCSEEEEECSSCCSSCCCC-----CHHHHHHHCSSCE
T ss_pred CHHHHHHHHHHHhhc-CCeEEEEeCC--c--cHHHHHHHHHHCCCCEEEEeCCccccccCCCcccHHHHHHHHHhcCCCE
Confidence 788889999999886 8999999883 2 3567788888899999999865422223233 26667889999999999
Q ss_pred EEecCCCCHHHHHHHHHhhh---hhcc
Q psy4398 232 IANGGSKEIVDYGGVFSLNC---AFLR 255 (306)
Q Consensus 232 ia~GGI~s~~~~~~~l~~~v---~vGr 255 (306)
|+ |||.|+++++.+++.|+ .+|+
T Consensus 215 i~-ggi~t~e~a~~~~~~Gad~i~vg~ 240 (393)
T 2qr6_A 215 IA-GGVNDYTTALHMMRTGAVGIIVGG 240 (393)
T ss_dssp EE-ECCCSHHHHHHHHTTTCSEEEESC
T ss_pred EE-CCcCCHHHHHHHHHcCCCEEEECC
Confidence 98 89999999999998765 5555
No 215
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=97.67 E-value=0.00011 Score=64.87 Aligned_cols=132 Identities=14% Similarity=0.091 Sum_probs=87.8
Q ss_pred CCceEEEecCCCHHHHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEeccCC
Q psy4398 101 KNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFH 180 (306)
Q Consensus 101 ~~p~ivql~g~~~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~ 180 (306)
+.|+..+=+-.++.+.. .....|+|+|-|.. ..+. +.+.++++..++ .+..+.|-+.
T Consensus 106 ~lPvl~kdfI~d~~qi~---~a~~~GAD~VlL~~--------------~~l~--~~l~~l~~~a~~-lGl~~lvev~--- 162 (254)
T 1vc4_A 106 DLPLLRKDFVVDPFMLE---EARAFGASAALLIV--------------ALLG--ELTGAYLEEARR-LGLEALVEVH--- 162 (254)
T ss_dssp CSCEEEESCCCSHHHHH---HHHHTTCSEEEEEH--------------HHHG--GGHHHHHHHHHH-HTCEEEEEEC---
T ss_pred CCCEEECCcCCCHHHHH---HHHHcCCCEEEECc--------------cchH--HHHHHHHHHHHH-CCCeEEEEEC---
Confidence 45665544345554332 22345999999942 2222 456667665544 4655555555
Q ss_pred ChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhC-----CCcEEEecCCCCHHHHHHHHHhhh---h
Q psy4398 181 NEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHL-----KIPVIANGGSKEIVDYGGVFSLNC---A 252 (306)
Q Consensus 181 ~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~-----~ipvia~GGI~s~~~~~~~l~~~v---~ 252 (306)
+.+ + ++.+.+.|+|.|-++.+..... ..+++...++.+.+ ++|+|+.|||.|++|+..+.+ |+ .
T Consensus 163 ~~~---E-~~~a~~~gad~IGvn~~~l~~~---~~dl~~~~~L~~~i~~~~~~~~vIAegGI~s~~dv~~l~~-Ga~gvl 234 (254)
T 1vc4_A 163 TER---E-LEIALEAGAEVLGINNRDLATL---HINLETAPRLGRLARKRGFGGVLVAESGYSRKEELKALEG-LFDAVL 234 (254)
T ss_dssp SHH---H-HHHHHHHTCSEEEEESBCTTTC---CBCTTHHHHHHHHHHHTTCCSEEEEESCCCSHHHHHTTTT-TCSEEE
T ss_pred CHH---H-HHHHHHcCCCEEEEccccCcCC---CCCHHHHHHHHHhCccccCCCeEEEEcCCCCHHHHHHHHc-CCCEEE
Confidence 222 3 2356678999999988764322 24667777777766 789999999999999999998 76 9
Q ss_pred hccccCCCCCc
Q psy4398 253 FLRNHYPVEKL 263 (306)
Q Consensus 253 vGrall~~p~~ 263 (306)
+|++++..+..
T Consensus 235 VGsAl~~~~d~ 245 (254)
T 1vc4_A 235 IGTSLMRAPDL 245 (254)
T ss_dssp ECHHHHTSSCH
T ss_pred EeHHHcCCCCH
Confidence 99999986543
No 216
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=97.64 E-value=0.00048 Score=58.52 Aligned_cols=71 Identities=23% Similarity=0.240 Sum_probs=55.0
Q ss_pred HHHHHcCCcEEEEcccCCC---CCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHh---hhhhccccCCCCC
Q psy4398 190 KRLEACGIIAIGVHGRTKA---ERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSL---NCAFLRNHYPVEK 262 (306)
Q Consensus 190 ~~l~~~G~d~i~v~~~~~~---~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~---~v~vGrall~~p~ 262 (306)
..+.+.|+|++.+++.... +. ..+.+|+.++++++.+++||++.|||+ .+++.++++. ++.+|++++..|.
T Consensus 122 ~~~~~~g~d~i~~~~~~~~~~~~~-~~~~~~~~l~~l~~~~~~pvia~GGI~-~~nv~~~~~~Ga~gv~vgs~i~~~~d 198 (215)
T 1xi3_A 122 LEAEKKGADYLGAGSVFPTKTKED-ARVIGLEGLRKIVESVKIPVVAIGGIN-KDNAREVLKTGVDGIAVISAVMGAED 198 (215)
T ss_dssp HHHHHHTCSEEEEECSSCC----C-CCCCHHHHHHHHHHHCSSCEEEESSCC-TTTHHHHHTTTCSEEEESHHHHTSSS
T ss_pred HHHHhcCCCEEEEcCCccCCCCCC-CCCcCHHHHHHHHHhCCCCEEEECCcC-HHHHHHHHHcCCCEEEEhHHHhCCCC
Confidence 4456789999998653211 11 235688999999998899999999999 9999998876 4599999987664
No 217
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=97.62 E-value=0.00017 Score=63.24 Aligned_cols=73 Identities=14% Similarity=0.066 Sum_probs=54.1
Q ss_pred HHHHHHcCCcEEEEcccCCCC--CCCCCCcHHHHHHHHhh--CCCcEEEecCCCCHHHHHHHHHhh---hhhccccCCCC
Q psy4398 189 CKRLEACGIIAIGVHGRTKAE--RPRHRNRIEMIRTLTQH--LKIPVIANGGSKEIVDYGGVFSLN---CAFLRNHYPVE 261 (306)
Q Consensus 189 a~~l~~~G~d~i~v~~~~~~~--~~~~p~~~~~v~~i~~~--~~ipvia~GGI~s~~~~~~~l~~~---v~vGrall~~p 261 (306)
++.+.+.|+|+|.+....... ....+..++.++++++. .++||++.||| +.+++.++++.| +++|++++..+
T Consensus 148 a~~A~~~GaDyI~vgpvf~T~tK~~~~~~gl~~l~~~~~~~~~~iPvvAiGGI-~~~ni~~~~~aGa~gvav~sai~~a~ 226 (243)
T 3o63_A 148 VAAAAAGDADYFCVGPCWPTPTKPGRAAPGLGLVRVAAELGGDDKPWFAIGGI-NAQRLPAVLDAGARRIVVVRAITSAD 226 (243)
T ss_dssp HHHHHHSSCSEEEECCSSCCCC-----CCCHHHHHHHHTC---CCCEEEESSC-CTTTHHHHHHTTCCCEEESHHHHTCS
T ss_pred HHHHhhCCCCEEEEcCccCCCCCCCcchhhHHHHHHHHHhccCCCCEEEecCC-CHHHHHHHHHcCCCEEEEeHHHhCCC
Confidence 455667999999996642211 11135678999999987 48999999999 799999999875 59999998754
Q ss_pred C
Q psy4398 262 K 262 (306)
Q Consensus 262 ~ 262 (306)
.
T Consensus 227 d 227 (243)
T 3o63_A 227 D 227 (243)
T ss_dssp S
T ss_pred C
Confidence 3
No 218
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=97.62 E-value=0.00035 Score=67.66 Aligned_cols=117 Identities=13% Similarity=0.066 Sum_probs=78.9
Q ss_pred HHHH-hcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc-c-ccEEEEeccCCChHHHHHHHHHHHHcC
Q psy4398 120 AKKV-EHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL-S-IPVSCKIRVFHNEADTIALCKRLEACG 196 (306)
Q Consensus 120 a~~~-~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~-~pv~vKir~g~~~~~~~~~a~~l~~~G 196 (306)
++.+ +.|++.+.++...- ++..+.+.++.+++.. + .|+.++-- .+ .+-++.+.++|
T Consensus 247 ~~~l~e~gv~~l~Vd~~~g---------------~~~~~~~~i~~lk~~~~~~~~Vi~G~V--~t----~~~a~~l~~aG 305 (503)
T 1me8_A 247 VPALVEAGADVLCIDSSDG---------------FSEWQKITIGWIREKYGDKVKVGAGNI--VD----GEGFRYLADAG 305 (503)
T ss_dssp HHHHHHHTCSEEEECCSCC---------------CSHHHHHHHHHHHHHHGGGSCEEEEEE--CS----HHHHHHHHHHT
T ss_pred HHHHHhhhccceEEecccC---------------cccchhhHHHHHHHhCCCCceEeeccc--cC----HHHHHHHHHhC
Confidence 4444 34888888864421 2233556667887776 4 78887655 33 45666778899
Q ss_pred CcEEEEcccCCCC----C---CCCCCcHHHHHHHHhhC---------CCcEEEecCCCCHHHHHHHHHhhh---hhcccc
Q psy4398 197 IIAIGVHGRTKAE----R---PRHRNRIEMIRTLTQHL---------KIPVIANGGSKEIVDYGGVFSLNC---AFLRNH 257 (306)
Q Consensus 197 ~d~i~v~~~~~~~----~---~~~p~~~~~v~~i~~~~---------~ipvia~GGI~s~~~~~~~l~~~v---~vGral 257 (306)
+|++.+ +..... + ..+.+.+..+.++.+++ ++|||+.|||.+..|+.+++..|+ ++||++
T Consensus 306 ad~I~V-g~~~g~~~~~r~~~~~g~p~~~~l~~v~~~~~~~~~~~~~~ipvia~GGi~~~~di~kAlalGA~~V~iG~~~ 384 (503)
T 1me8_A 306 ADFIKI-GIGGGSICITREQKGIGRGQATAVIDVVAERNKYFEETGIYIPVCSDGGIVYDYHMTLALAMGADFIMLGRYF 384 (503)
T ss_dssp CSEEEE-CSSCSTTCCSTTTTCCCCCHHHHHHHHHHHHHHHHHHHSEECCEEEESCCCSHHHHHHHHHTTCSEEEESHHH
T ss_pred CCeEEe-cccCCcCcccccccCCCCchHHHHHHHHHHHHHHhhhcCCCceEEEeCCCCCHHHHHHHHHcCCCEEEECchh
Confidence 999998 432211 1 11234566666665443 699999999999999999999864 999988
Q ss_pred C
Q psy4398 258 Y 258 (306)
Q Consensus 258 l 258 (306)
+
T Consensus 385 ~ 385 (503)
T 1me8_A 385 A 385 (503)
T ss_dssp H
T ss_pred h
Confidence 5
No 219
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=97.62 E-value=0.00021 Score=62.14 Aligned_cols=139 Identities=12% Similarity=0.170 Sum_probs=91.8
Q ss_pred eEEEecCCCHHHHHHHHHHHhcCCCEEEEcc--CC--CccccccCCccccccCChHHHHHHHHHHHhcccccEEEEeccC
Q psy4398 104 IILQIGTADPERALEAAKKVEHDVAAIDINM--GC--PKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVF 179 (306)
Q Consensus 104 ~ivql~g~~~~~~~~aa~~~~~g~d~veln~--gc--P~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g 179 (306)
+..||...|..++.+..+.++.|+|.+.+.. |+ |+- .+| .++++++|+.++.|+.+-+=..
T Consensus 3 i~pSila~D~~~l~~~i~~~~~gad~lHvDvmDG~fvpn~-----t~G----------~~~v~~lr~~~~~~~dvhLmv~ 67 (231)
T 3ctl_A 3 ISPSLMCMDLLKFKEQIEFIDSHADYFHIDIMDGHFVPNL-----TLS----------PFFVSQVKKLATKPLDCHLMVT 67 (231)
T ss_dssp EEEBGGGSCGGGHHHHHHHHHTTCSCEEEEEECSSSSSCC-----CBC----------HHHHHHHHTTCCSCEEEEEESS
T ss_pred EEeehhhCChhhHHHHHHHHHcCCCEEEEEEEeCccCccc-----hhc----------HHHHHHHHhccCCcEEEEEEec
Confidence 4567777777788888887755999755432 32 431 222 3478888887778877766542
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEcccC-C---------------------------------------------CCCCC-
Q psy4398 180 HNEADTIALCKRLEACGIIAIGVHGRT-K---------------------------------------------AERPR- 212 (306)
Q Consensus 180 ~~~~~~~~~a~~l~~~G~d~i~v~~~~-~---------------------------------------------~~~~~- 212 (306)
+++ ++++.+.++|+|.+++|.-. . ..++.
T Consensus 68 -dp~---~~i~~~~~aGAd~itvh~Ea~~~~~~~~i~~i~~~G~k~gv~lnp~tp~~~~~~~l~~~D~VlvmsV~pGfgg 143 (231)
T 3ctl_A 68 -RPQ---DYIAQLARAGADFITLHPETINGQAFRLIDEIRRHDMKVGLILNPETPVEAMKYYIHKADKITVMTVDPGFAG 143 (231)
T ss_dssp -CGG---GTHHHHHHHTCSEEEECGGGCTTTHHHHHHHHHHTTCEEEEEECTTCCGGGGTTTGGGCSEEEEESSCTTCSS
T ss_pred -CHH---HHHHHHHHcCCCEEEECcccCCccHHHHHHHHHHcCCeEEEEEECCCcHHHHHHHHhcCCEEEEeeeccCcCC
Confidence 332 35577778888888876422 0 00011
Q ss_pred ---CCCcHHHHHHHHhhC-----CCcEEEecCCCCHHHHHHHHHhhh---hhc-cccCCCCC
Q psy4398 213 ---HRNRIEMIRTLTQHL-----KIPVIANGGSKEIVDYGGVFSLNC---AFL-RNHYPVEK 262 (306)
Q Consensus 213 ---~p~~~~~v~~i~~~~-----~ipvia~GGI~s~~~~~~~l~~~v---~vG-rall~~p~ 262 (306)
.+..++-++++++.. +++|.+-|||+ .+++.+++++|+ .+| |+++..+.
T Consensus 144 Q~f~~~~l~kI~~lr~~~~~~~~~~~I~VdGGI~-~~~~~~~~~aGAd~~V~G~saif~~~d 204 (231)
T 3ctl_A 144 QPFIPEMLDKLAELKAWREREGLEYEIEVDGSCN-QATYEKLMAAGADVFIVGTSGLFNHAE 204 (231)
T ss_dssp CCCCTTHHHHHHHHHHHHHHHTCCCEEEEESCCS-TTTHHHHHHHTCCEEEECTTTTGGGCS
T ss_pred ccccHHHHHHHHHHHHHHhccCCCceEEEECCcC-HHHHHHHHHcCCCEEEEccHHHhCCCC
Confidence 133467777777765 68999999998 677888888764 999 99997443
No 220
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=97.56 E-value=0.00057 Score=61.53 Aligned_cols=138 Identities=13% Similarity=0.152 Sum_probs=81.9
Q ss_pred CCceEEEecCCCH---H-----HHHHHHHHHhcCCCEEEEcc--CCCccccccCCccccccCChHHHHHHHHHHHhcccc
Q psy4398 101 KNKIILQIGTADP---E-----RALEAAKKVEHDVAAIDINM--GCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSI 170 (306)
Q Consensus 101 ~~p~ivql~g~~~---~-----~~~~aa~~~~~g~d~veln~--gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~ 170 (306)
+.|+|+.+.+++. + -+.++.+.++.|+|+|.+++ +.+. + ....+.+.++++...+ .++
T Consensus 105 ~~~lil~l~~~t~~~~~~~~~~l~~~ve~Av~~GAdaV~~~i~~Gs~~-------~----~~~l~~i~~v~~~a~~-~Gl 172 (295)
T 3glc_A 105 NRPVVLRASGANSILAELSNEAVALSMDDAVRLNSCAVAAQVYIGSEY-------E----HQSIKNIIQLVDAGMK-VGM 172 (295)
T ss_dssp CCCEEEECEECCCTTSCTTCCEECSCHHHHHHTTCSEEEEEECTTSTT-------H----HHHHHHHHHHHHHHHT-TTC
T ss_pred CccEEEEEcCCCcCCCCCccchhHHHHHHHHHCCCCEEEEEEECCCCc-------H----HHHHHHHHHHHHHHHH-cCC
Confidence 4568887765431 1 11223333456999988853 3211 0 0112233344444433 378
Q ss_pred cEEEEeccC----CChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCC-CHHH---
Q psy4398 171 PVSCKIRVF----HNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSK-EIVD--- 242 (306)
Q Consensus 171 pv~vKir~g----~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~-s~~~--- 242 (306)
|+.+-...| .+.+.....++...+.|+|.|-..- .+ +.++++.+.+++||++.||+. +.++
T Consensus 173 pvIie~~~G~~~~~d~e~i~~aariA~elGAD~VKt~~-------t~----e~~~~vv~~~~vPVv~~GG~~~~~~~~l~ 241 (295)
T 3glc_A 173 PTMAVTGVGKDMVRDQRYFSLATRIAAEMGAQIIKTYY-------VE----KGFERIVAGCPVPIVIAGGKKLPEREALE 241 (295)
T ss_dssp CEEEEECC----CCSHHHHHHHHHHHHHTTCSEEEEEC-------CT----TTHHHHHHTCSSCEEEECCSCCCHHHHHH
T ss_pred EEEEECCCCCccCCCHHHHHHHHHHHHHhCCCEEEeCC-------CH----HHHHHHHHhCCCcEEEEECCCCCHHHHHH
Confidence 887743322 2333356688999999999998761 11 235777778899999999998 4433
Q ss_pred -HHHHHHh---hhhhccccCCCC
Q psy4398 243 -YGGVFSL---NCAFLRNHYPVE 261 (306)
Q Consensus 243 -~~~~l~~---~v~vGrall~~p 261 (306)
++++++. |+.+||+++..|
T Consensus 242 ~v~~ai~aGA~Gv~vGRnI~q~~ 264 (295)
T 3glc_A 242 MCWQAIDQGASGVDMGRNIFQSD 264 (295)
T ss_dssp HHHHHHHTTCSEEEESHHHHTSS
T ss_pred HHHHHHHhCCeEEEeHHHHhcCc
Confidence 3444454 459999998755
No 221
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=97.55 E-value=0.00026 Score=66.59 Aligned_cols=145 Identities=7% Similarity=0.005 Sum_probs=100.7
Q ss_pred HHhcCCCEEEEccCCCccccccCCccccc-cCChHHHHHHHHHHHhcc--cccEEEEeccCCChHHHHHHHHHHHHcCCc
Q psy4398 122 KVEHDVAAIDINMGCPKQFSLTGGMGAAL-LSTPDIACNILTTLISNL--SIPVSCKIRVFHNEADTIALCKRLEACGII 198 (306)
Q Consensus 122 ~~~~g~d~veln~gcP~~~~~~~~~G~~l-~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~~a~~l~~~G~d 198 (306)
.+++||..+-+..+.|... .. +++.. ..+++.-.+.++++|+.+ ++++.+....+|+.+++.++++.|++.|++
T Consensus 163 ~~~~G~~~~Kik~g~~~~~--~~-~~g~~~~~~~~~d~~~v~avR~a~g~~~~l~vDaN~~~~~~~A~~~~~~L~~~~i~ 239 (400)
T 4dxk_A 163 LLEDGITAMKIWPFDAAAE--KT-RGQYISMPDLKSALEPFEKIRKAVGDKMDIMVEFHSMWQLLPAMQIAKALTPYQTF 239 (400)
T ss_dssp HHHTTCCEEEECTTHHHHH--HH-TTSCCCHHHHHHHHHHHHHHHHHHGGGSEEEEECTTCBCHHHHHHHHHHTGGGCCS
T ss_pred HHHhCCCEEEEcCCCcccc--cc-ccCcCCHHHHHHHHHHHHHHHHHcCCCceEEEECCCCCCHHHHHHHHHHHhhcCCC
Confidence 3456999999986632210 00 01111 123566788999999988 467888888789999999999999999999
Q ss_pred EEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhhhhccccCCCC-Cc----hHHHHHHHHH
Q psy4398 199 AIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNCAFLRNHYPVE-KL----PKTILYAHCK 273 (306)
Q Consensus 199 ~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v~vGrall~~p-~~----~~~~l~~~~~ 273 (306)
+|. ++ ..+.+++..+++++.+++||++...+.+.++++++++.+. ...+.-++ .+ .-+.+.+..+
T Consensus 240 ~iE-------eP-~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a--~d~v~~d~~~~GGit~~~kia~~A~ 309 (400)
T 4dxk_A 240 WHE-------DP-IKMDSLSSLTRYAAVSPAPISASETLGSRWAFRDLLETGA--AGVVMLDISWCGGLSEARKIASMAE 309 (400)
T ss_dssp EEE-------CC-BCTTSGGGHHHHHHHCSSCEEECTTCCHHHHHHHHHHTTC--CCEEEECTTTTTHHHHHHHHHHHHH
T ss_pred EEE-------cC-CCcccHHHHHHHHHhCCCCEEecCCcCCHHHHHHHHHcCC--CCEEEeCccccCCHHHHHHHHHHHH
Confidence 986 11 2245778889999999999999999999999999988532 00011122 11 1125667777
Q ss_pred hcCCCC
Q psy4398 274 YKRFEV 279 (306)
Q Consensus 274 ~~g~~~ 279 (306)
++|++.
T Consensus 310 ~~gi~~ 315 (400)
T 4dxk_A 310 AWHLPV 315 (400)
T ss_dssp HTTCCE
T ss_pred HcCCEE
Confidence 888774
No 222
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=97.49 E-value=0.0023 Score=59.30 Aligned_cols=152 Identities=11% Similarity=0.060 Sum_probs=106.2
Q ss_pred CceEEEecCCCHHHHHHHHHHH-hcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc-cccEEEEeccC
Q psy4398 102 NKIILQIGTADPERALEAAKKV-EHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL-SIPVSCKIRVF 179 (306)
Q Consensus 102 ~p~ivql~g~~~~~~~~aa~~~-~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~g 179 (306)
.|+...+...+++++.+.++.+ ++||..+-+.+|.. +++.-.+.++++|+.+ +.++.+-...+
T Consensus 133 v~~~~~~~~~~~e~~~~~a~~~~~~G~~~iK~Kvg~~---------------~~~~d~~~v~avr~~~~~~~l~vDaN~~ 197 (365)
T 3ik4_A 133 LETDMTITAGDEVHAAASAKAILARGIKSIKVKTAGV---------------DVAYDLARLRAIHQAAPTAPLIVDGNCG 197 (365)
T ss_dssp EEBCEEECCSCHHHHHHHHHHHHHTTCCCEEEECCSS---------------CHHHHHHHHHHHHHHSSSCCEEEECTTC
T ss_pred eeeeEEecCCCHHHHHHHHHHHHHcCCCEEEEEeCCC---------------CHHHHHHHHHHHHHhCCCCeEEEECCCC
Confidence 3455567778899988877755 46999999987642 3555667788888877 34566666667
Q ss_pred CChHHHHHHHHHH--HHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhhhhcccc
Q psy4398 180 HNEADTIALCKRL--EACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNCAFLRNH 257 (306)
Q Consensus 180 ~~~~~~~~~a~~l--~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v~vGral 257 (306)
|+.+++.++++.+ ++.++.+|- ++. .+.+++..+++++.+++||.+.-.+.+..+++++++.+. ...+
T Consensus 198 ~~~~~A~~~~~~L~~~~~~i~~iE-------eP~-~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a--~d~v 267 (365)
T 3ik4_A 198 YDVERALAFCAACKAESIPMVLFE-------QPL-PREDWAGMAQVTAQSGFAVAADESARSAHDVLRIAREGT--ASVI 267 (365)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEE-------CCS-CTTCHHHHHHHHHHSSSCEEESTTCSSHHHHHHHHHHTC--CSEE
T ss_pred CCHHHHHHHHHHHhhCCCCceEEE-------CCC-CcccHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHhCC--CCEE
Confidence 9999999999999 666665553 222 345889999999999999999999999999999887532 0000
Q ss_pred CCCC----CchHHHHHHHHHhcCCC
Q psy4398 258 YPVE----KLPKTILYAHCKYKRFE 278 (306)
Q Consensus 258 l~~p----~~~~~~l~~~~~~~g~~ 278 (306)
.-+| ...-+.+.++.+++|++
T Consensus 268 ~ik~~~GGit~~~~i~~~A~~~gi~ 292 (365)
T 3ik4_A 268 NIKLMKAGVAEGLKMIAIAQAAGLG 292 (365)
T ss_dssp EECHHHHCHHHHHHHHHHHHHHTCE
T ss_pred EEcCCccCHHHHHHHHHHHHHcCCe
Confidence 0011 11223566677778877
No 223
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=97.49 E-value=0.00024 Score=63.01 Aligned_cols=149 Identities=9% Similarity=0.063 Sum_probs=81.0
Q ss_pred CCceEEEecCCCHH-HHHHHHHHHhc-CCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEe
Q psy4398 101 KNKIILQIGTADPE-RALEAAKKVEH-DVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKI 176 (306)
Q Consensus 101 ~~p~ivql~g~~~~-~~~~aa~~~~~-g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKi 176 (306)
+.|++.|+.+.+|- .+....+.+++ ||.+| +|+..=- -..+.|-..|+++.--+.+.++.++.+- +. +++=+
T Consensus 94 ~iPV~Agv~~~DP~~~~g~~Le~lk~~Gf~Gv-~N~ptvg--lidG~fr~~LEE~gm~~~~eve~I~~A~~~gL-~Ti~~ 169 (286)
T 2p10_A 94 HTPVLAGVNGTDPFMVMSTFLRELKEIGFAGV-QNFPTVG--LIDGLFRQNLEETGMSYAQEVEMIAEAHKLDL-LTTPY 169 (286)
T ss_dssp SSCEEEEECTTCTTCCHHHHHHHHHHHTCCEE-EECSCGG--GCCHHHHHHHHHTTCCHHHHHHHHHHHHHTTC-EECCE
T ss_pred CCCEEEEECCcCCCcCHHHHHHHHHHhCCceE-EECCCcc--cccchhhhhHhhcCCCHHHHHHHHHHHHHCCC-eEEEe
Confidence 57999999988873 23333466664 99999 9975211 1122333334443323344444443322 32 22222
Q ss_pred ccCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCC---CCc----HHHHHHHHhhC-----CCcEEEec-CCCCHHHH
Q psy4398 177 RVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRH---RNR----IEMIRTLTQHL-----KIPVIANG-GSKEIVDY 243 (306)
Q Consensus 177 r~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~---p~~----~~~v~~i~~~~-----~ipvia~G-GI~s~~~~ 243 (306)
- .+ .+-++.+.++|+|.|.+|...-.+...+ +.. .+.+.++.+++ ++.|+..| ||.+++|+
T Consensus 170 v--~~----~eeA~amA~agpDiI~~h~glT~gglIG~~~avs~~~~~e~i~~i~~a~~~vnpdvivLc~gGpIstpeDv 243 (286)
T 2p10_A 170 V--FS----PEDAVAMAKAGADILVCHMGLTTGGAIGARSGKSMDDCVSLINECIEAARTIRDDIIILSHGGPIANPEDA 243 (286)
T ss_dssp E--CS----HHHHHHHHHHTCSEEEEECSCC---------CCCHHHHHHHHHHHHHHHHHHCSCCEEEEESTTCCSHHHH
T ss_pred c--CC----HHHHHHHHHcCCCEEEECCCCCCCCcccCCCcccHHHhHHHHHHHHHHHHHhCCCcEEEecCCCCCCHHHH
Confidence 2 23 4555666789999999997632221111 112 23444443332 45566555 99999999
Q ss_pred HHHHHh--hh---hhccccCC
Q psy4398 244 GGVFSL--NC---AFLRNHYP 259 (306)
Q Consensus 244 ~~~l~~--~v---~vGrall~ 259 (306)
+.+++. ++ ..++++.+
T Consensus 244 ~~~l~~t~G~~G~~gASsier 264 (286)
T 2p10_A 244 RFILDSCQGCHGFYGASSMER 264 (286)
T ss_dssp HHHHHHCTTCCEEEESHHHHH
T ss_pred HHHHhcCCCccEEEeehhhhc
Confidence 999986 43 44455443
No 224
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=97.44 E-value=0.0013 Score=57.15 Aligned_cols=124 Identities=15% Similarity=0.108 Sum_probs=83.0
Q ss_pred HhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEecc------C---------CCh--HHH
Q psy4398 123 VEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRV------F---------HNE--ADT 185 (306)
Q Consensus 123 ~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~------g---------~~~--~~~ 185 (306)
++.|.|+|+|- ++..-..+.+.++++++|+ .++|+..-.+. | ++. .+.
T Consensus 33 ~~~GtDaI~vG--------------gs~gvt~~~~~~~v~~ik~-~~~Piil~p~~~~~~~~gaD~il~pslln~~~~~~ 97 (235)
T 3w01_A 33 CMSQTDAIMIG--------------GTDDVTEDNVIHLMSKIRR-YPLPLVLEISNIESVMPGFDFYFVPTVLNSTDVAF 97 (235)
T ss_dssp HTSSCSEEEEC--------------CSSCCCHHHHHHHHHHHTT-SCSCEEEECCCSTTCCTTCSEEEEEEETTBSSGGG
T ss_pred HHcCCCEEEEC--------------CcCCcCHHHHHHHHHHhcC-cCCCEEEecCCHHHhhcCCCEEEEccccCCCCcch
Confidence 45699999993 3333467888999999988 78888775442 1 011 111
Q ss_pred --HHHHHHHHHcCC-----cEEE-----EcccCC---------------------------CCC-----CCC-CCcHHHH
Q psy4398 186 --IALCKRLEACGI-----IAIG-----VHGRTK---------------------------AER-----PRH-RNRIEMI 220 (306)
Q Consensus 186 --~~~a~~l~~~G~-----d~i~-----v~~~~~---------------------------~~~-----~~~-p~~~~~v 220 (306)
-.-.+.+.+.|. +.|. +.+.+. ..+ +++ +.+.+++
T Consensus 98 i~g~~~~a~~~~gl~~~~~e~i~~gYivv~p~s~v~~v~~a~~~~~~e~iaa~A~~a~~~~g~~~vY~e~sG~~g~~~~v 177 (235)
T 3w01_A 98 HNGTLLEALKTYGHSIDFEEVIFEGYVVCNADSKVAKHTKANTDLTTEDLEAYAQMVNHMYRLPVMYIEYSGIYGDVSKV 177 (235)
T ss_dssp TTHHHHHHHHHHGGGCCGGGEEEEEEEECCSSSHHHHHTTBCCCCCHHHHHHHHHHHHHTTCCSEEEEECTTSCCCHHHH
T ss_pred hhhHHHHHHHHcCCCCcccceeeeeEEEECCCCChhhcccCCcCCCHHHHHHHHHHHHHHcCCCEEEEecCCCcCCHHHH
Confidence 122334666776 5554 211110 000 011 3478999
Q ss_pred HHHHhhC-CCcEEEecCCCCHHHHHHHHHh--hhhhccccCCCC
Q psy4398 221 RTLTQHL-KIPVIANGGSKEIVDYGGVFSL--NCAFLRNHYPVE 261 (306)
Q Consensus 221 ~~i~~~~-~ipvia~GGI~s~~~~~~~l~~--~v~vGrall~~p 261 (306)
+++++.+ ++|++..|||+|+++++++.+. ++.+|+++..||
T Consensus 178 ~~ir~~~~~~pv~vGfGI~~~e~a~~~~~gAD~VVVGSai~~~~ 221 (235)
T 3w01_A 178 QAVSEHLTETQLFYGGGISSEQQATEMAAIADTIIVGDIIYKDI 221 (235)
T ss_dssp HHHHTTCSSSEEEEESCCCSHHHHHHHHTTSSEEEECTHHHHCH
T ss_pred HHHHHhcCCCCEEEECCcCCHHHHHHHHcCCCEEEECCceecCH
Confidence 9999999 9999999999999999998872 569999999987
No 225
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=97.39 E-value=0.002 Score=55.73 Aligned_cols=138 Identities=16% Similarity=0.228 Sum_probs=82.6
Q ss_pred ceEEEecCCCHHHHHHHHHHHhc-CCCEEEEccCCCccc--c---------ccCCccccccCChHHH-------------
Q psy4398 103 KIILQIGTADPERALEAAKKVEH-DVAAIDINMGCPKQF--S---------LTGGMGAALLSTPDIA------------- 157 (306)
Q Consensus 103 p~ivql~g~~~~~~~~aa~~~~~-g~d~veln~gcP~~~--~---------~~~~~G~~l~~~~~~~------------- 157 (306)
+++.=|.+.+++++.+.++.+.+ |++.||+-+-.|... . ...++|.-+ +.+.+
T Consensus 18 ~ii~vir~~~~~~~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~~~l~vgaGtvl--~~d~~~~A~~aGAd~v~~ 95 (224)
T 1vhc_A 18 KIVPVIALDNADDILPLADTLAKNGLSVAEITFRSEAAADAIRLLRANRPDFLIAAGTVL--TAEQVVLAKSSGADFVVT 95 (224)
T ss_dssp CEEEEECCSSGGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTCEEEEESCC--SHHHHHHHHHHTCSEEEC
T ss_pred CeEEEEeCCCHHHHHHHHHHHHHcCCCEEEEeccCchHHHHHHHHHHhCcCcEEeeCcEe--eHHHHHHHHHCCCCEEEE
Confidence 55665666777777777776654 788888865433210 0 001222211 11211
Q ss_pred ----HHHHHHHHhcccccEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCC-cHHHHHHHHhhC-CCcE
Q psy4398 158 ----CNILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRN-RIEMIRTLTQHL-KIPV 231 (306)
Q Consensus 158 ----~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~-~~~~v~~i~~~~-~ipv 231 (306)
.++++..++ .+.++...+. + ..-+..+.+.|+|+|-++. ..+. ..++++++++.+ ++|+
T Consensus 96 p~~d~~v~~~ar~-~g~~~i~Gv~---t----~~e~~~A~~~Gad~vk~Fp-------a~~~gG~~~lk~l~~~~~~ipv 160 (224)
T 1vhc_A 96 PGLNPKIVKLCQD-LNFPITPGVN---N----PMAIEIALEMGISAVKFFP-------AEASGGVKMIKALLGPYAQLQI 160 (224)
T ss_dssp SSCCHHHHHHHHH-TTCCEECEEC---S----HHHHHHHHHTTCCEEEETT-------TTTTTHHHHHHHHHTTTTTCEE
T ss_pred CCCCHHHHHHHHH-hCCCEEeccC---C----HHHHHHHHHCCCCEEEEee-------CccccCHHHHHHHHhhCCCCeE
Confidence 123344443 4444444322 2 2223556679999999954 1122 368999999999 8999
Q ss_pred EEecCCCCHHHHHHHHHh-hh---hhccccCC
Q psy4398 232 IANGGSKEIVDYGGVFSL-NC---AFLRNHYP 259 (306)
Q Consensus 232 ia~GGI~s~~~~~~~l~~-~v---~vGrall~ 259 (306)
++.|||+ ++++.++++. ++ . |++++.
T Consensus 161 vaiGGI~-~~N~~~~l~agga~~v~-gS~i~~ 190 (224)
T 1vhc_A 161 MPTGGIG-LHNIRDYLAIPNIVACG-GSWFVE 190 (224)
T ss_dssp EEBSSCC-TTTHHHHHTSTTBCCEE-ECGGGC
T ss_pred EEECCcC-HHHHHHHHhcCCCEEEE-EchhcC
Confidence 9999995 6889899887 44 5 888875
No 226
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=97.36 E-value=0.0015 Score=57.47 Aligned_cols=132 Identities=13% Similarity=0.046 Sum_probs=96.3
Q ss_pred CCceEEEecCCCHHHHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEeccCC
Q psy4398 101 KNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFH 180 (306)
Q Consensus 101 ~~p~ivql~g~~~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~ 180 (306)
+.|++-+=+..++-+ ..+....|+|+|=|+..+ -+.+.+.++++..++ .+..+.|-+.
T Consensus 101 ~lPvLrKDfi~~~~q---i~ea~~~GAD~ilLi~a~---------------l~~~~l~~l~~~a~~-lGl~~lvEv~--- 158 (251)
T 1i4n_A 101 CRPILAKDFYIDTVQ---VKLASSVGADAILIIARI---------------LTAEQIKEIYEAAEE-LGMDSLVEVH--- 158 (251)
T ss_dssp CSCEEEECCCCSTHH---HHHHHHTTCSEEEEEGGG---------------SCHHHHHHHHHHHHT-TTCEEEEEEC---
T ss_pred CCCEEEeeCCCCHHH---HHHHHHcCCCEEEEeccc---------------CCHHHHHHHHHHHHH-cCCeEEEEeC---
Confidence 568887755555433 333234599999998653 123567788888766 5888888888
Q ss_pred ChHHHHHHHHHHHHc-CCcEEEEcccCCCCCCCCCCcHHHHHHHHhhC--CCcEEEecCCCCHHHHHHHHHh--hhhhcc
Q psy4398 181 NEADTIALCKRLEAC-GIIAIGVHGRTKAERPRHRNRIEMIRTLTQHL--KIPVIANGGSKEIVDYGGVFSL--NCAFLR 255 (306)
Q Consensus 181 ~~~~~~~~a~~l~~~-G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~--~ipvia~GGI~s~~~~~~~l~~--~v~vGr 255 (306)
+.+ -++.+.+. |++.|-++.|..... ..+++...++.+.+ ++++|+-|||.+++|+..+.+. ++.+|+
T Consensus 159 ~~e----E~~~A~~l~g~~iIGinnr~l~t~---~~d~~~~~~l~~~ip~~~~vIaEsGI~t~edv~~~~~~a~avLVG~ 231 (251)
T 1i4n_A 159 SRE----DLEKVFSVIRPKIIGINTRDLDTF---EIKKNVLWELLPLVPDDTVVVAESGIKDPRELKDLRGKVNAVLVGT 231 (251)
T ss_dssp SHH----HHHHHHTTCCCSEEEEECBCTTTC---CBCTTHHHHHGGGSCTTSEEEEESCCCCGGGHHHHTTTCSEEEECH
T ss_pred CHH----HHHHHHhcCCCCEEEEeCcccccC---CCCHHHHHHHHHhCCCCCEEEEeCCCCCHHHHHHHHHhCCEEEEcH
Confidence 323 35566778 999999998864332 23677888888887 6899999999999999999886 448999
Q ss_pred ccCCCC
Q psy4398 256 NHYPVE 261 (306)
Q Consensus 256 all~~p 261 (306)
++++.+
T Consensus 232 aimr~~ 237 (251)
T 1i4n_A 232 SIMKAE 237 (251)
T ss_dssp HHHHCS
T ss_pred HHcCCc
Confidence 998644
No 227
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=97.35 E-value=0.0038 Score=55.85 Aligned_cols=138 Identities=11% Similarity=0.140 Sum_probs=93.1
Q ss_pred CCCCceEEEecCC-CHHHHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEec
Q psy4398 99 REKNKIILQIGTA-DPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIR 177 (306)
Q Consensus 99 ~~~~p~ivql~g~-~~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir 177 (306)
..+.|+++.+-+. +.+ .+.+.++.||.-|.+..|. -.++++.+...++++...+ .+++|-.-+.
T Consensus 78 ~~~VPValHlDHg~~~e---~i~~ai~~GFtSVMiDgS~-----------~p~eeNi~~Tk~vv~~ah~-~gvsVEaElG 142 (288)
T 3q94_A 78 NITVPVAIHLDHGSSFE---KCKEAIDAGFTSVMIDASH-----------HPFEENVETTKKVVEYAHA-RNVSVEAELG 142 (288)
T ss_dssp TCCSCEEEEEEEECSHH---HHHHHHHHTCSEEEECCTT-----------SCHHHHHHHHHHHHHHHHT-TTCEEEEEES
T ss_pred CCCCcEEEECCCCCCHH---HHHHHHHcCCCeEEEeCCC-----------CCHHHHHHHHHHHHHHHHH-cCCeEEEEee
Confidence 3567888888654 433 3333345688888886543 2345677788888877654 4777776666
Q ss_pred c-CCC----------hHHHHHHHHHHHHcCCcEEEEcccCCCCCCCC--CCcHHHHHHHHhhCCCcEEEecCCCC-HHHH
Q psy4398 178 V-FHN----------EADTIALCKRLEACGIIAIGVHGRTKAERPRH--RNRIEMIRTLTQHLKIPVIANGGSKE-IVDY 243 (306)
Q Consensus 178 ~-g~~----------~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~--p~~~~~v~~i~~~~~ipvia~GGI~s-~~~~ 243 (306)
. |.. ..+..+..+..++.|+|.|-+.=.+..+.|.+ ..+++.+++|++.+++|++.-||-.. .++.
T Consensus 143 ~vgG~Ed~~~~~~~~yT~Peea~~Fv~~TgvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~~v~vpLVlHGgSG~~~e~i 222 (288)
T 3q94_A 143 TVGGQEDDVIAEGVIYADPAECKHLVEATGIDCLAPALGSVHGPYKGEPNLGFAEMEQVRDFTGVPLVLHGGTGIPTADI 222 (288)
T ss_dssp BCBCSCSSCGGGGCBCCCHHHHHHHHHHHCCSEEEECSSCBSSCCSSSCCCCHHHHHHHHHHHCSCEEECCCTTCCHHHH
T ss_pred eeccccCCcCCccccCCCHHHHHHHHHHHCCCEEEEEcCcccCCcCCCCccCHHHHHHHHHhcCCCEEEeCCCCCCHHHH
Confidence 4 110 12345555666789999998754444444432 35889999999999999999999775 4557
Q ss_pred HHHHHhhh
Q psy4398 244 GGVFSLNC 251 (306)
Q Consensus 244 ~~~l~~~v 251 (306)
+++++.|+
T Consensus 223 ~~ai~~Gv 230 (288)
T 3q94_A 223 EKAISLGT 230 (288)
T ss_dssp HHHHHTTE
T ss_pred HHHHHcCC
Confidence 88888765
No 228
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=97.35 E-value=0.00073 Score=57.98 Aligned_cols=143 Identities=13% Similarity=0.120 Sum_probs=90.4
Q ss_pred CceEEEecCCCHHHHHHHHHHHhc-CCCEEEEccCCCccc---------c--ccCCccccccCChHHHH-----------
Q psy4398 102 NKIILQIGTADPERALEAAKKVEH-DVAAIDINMGCPKQF---------S--LTGGMGAALLSTPDIAC----------- 158 (306)
Q Consensus 102 ~p~ivql~g~~~~~~~~aa~~~~~-g~d~veln~gcP~~~---------~--~~~~~G~~l~~~~~~~~----------- 158 (306)
.|++.=|.+.++++....++.+.+ |++.||+.+..|..- . .--+.|.-+ +++.+.
T Consensus 13 ~~vi~Vir~~~~~~a~~~a~al~~gGi~~iEvt~~t~~a~~~I~~l~~~~p~~~IGAGTVl--t~~~a~~ai~AGA~fiv 90 (217)
T 3lab_A 13 KPLIPVIVIDDLVHAIPMAKALVAGGVHLLEVTLRTEAGLAAISAIKKAVPEAIVGAGTVC--TADDFQKAIDAGAQFIV 90 (217)
T ss_dssp CSEEEEECCSCGGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTSEEEEECCC--SHHHHHHHHHHTCSEEE
T ss_pred CCEEEEEEcCCHHHHHHHHHHHHHcCCCEEEEeCCCccHHHHHHHHHHHCCCCeEeecccc--CHHHHHHHHHcCCCEEE
Confidence 478888899999999999997765 999999988766420 0 001222221 333333
Q ss_pred ------HHHHHHHhcccc------cEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhh
Q psy4398 159 ------NILTTLISNLSI------PVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQH 226 (306)
Q Consensus 159 ------eiv~~v~~~~~~------pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~ 226 (306)
++++..++. ++ |+.-.+. + ..-+..+.++|+|.|-++.... . ...++++.++..
T Consensus 91 sP~~~~evi~~~~~~-~v~~~~~~~~~PG~~---T----ptE~~~A~~~Gad~vK~FPa~~---~---gG~~~lkal~~p 156 (217)
T 3lab_A 91 SPGLTPELIEKAKQV-KLDGQWQGVFLPGVA---T----ASEVMIAAQAGITQLKCFPASA---I---GGAKLLKAWSGP 156 (217)
T ss_dssp ESSCCHHHHHHHHHH-HHHCSCCCEEEEEEC---S----HHHHHHHHHTTCCEEEETTTTT---T---THHHHHHHHHTT
T ss_pred eCCCcHHHHHHHHHc-CCCccCCCeEeCCCC---C----HHHHHHHHHcCCCEEEECcccc---c---cCHHHHHHHHhh
Confidence 233332221 33 4444333 2 2233445679999998864211 1 135899999998
Q ss_pred C-CCcEEEecCCCCHHHHHHHHHhhh--hhccccCCCC
Q psy4398 227 L-KIPVIANGGSKEIVDYGGVFSLNC--AFLRNHYPVE 261 (306)
Q Consensus 227 ~-~ipvia~GGI~s~~~~~~~l~~~v--~vGrall~~p 261 (306)
+ ++|+++.|||+ ++++.+.++.+. .+|...+..+
T Consensus 157 ~p~i~~~ptGGI~-~~N~~~~l~aGa~~~vgGs~l~~~ 193 (217)
T 3lab_A 157 FPDIQFCPTGGIS-KDNYKEYLGLPNVICAGGSWLTES 193 (217)
T ss_dssp CTTCEEEEBSSCC-TTTHHHHHHSTTBCCEEESGGGCH
T ss_pred hcCceEEEeCCCC-HHHHHHHHHCCCEEEEEChhhcCh
Confidence 8 79999999998 899999998764 4444444433
No 229
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=97.32 E-value=0.00074 Score=58.66 Aligned_cols=139 Identities=14% Similarity=0.161 Sum_probs=88.5
Q ss_pred CceEEEecCCCHHHHHHHHHHHhc-CCCEEEEccCCCccc---------c--ccCCccccccCChHHHHH----------
Q psy4398 102 NKIILQIGTADPERALEAAKKVEH-DVAAIDINMGCPKQF---------S--LTGGMGAALLSTPDIACN---------- 159 (306)
Q Consensus 102 ~p~ivql~g~~~~~~~~aa~~~~~-g~d~veln~gcP~~~---------~--~~~~~G~~l~~~~~~~~e---------- 159 (306)
.+++.=+.+.++++..+.++.+.+ |++.||+.+..|... . ..-+.|.-+ +.+.+..
T Consensus 34 ~~vv~Vir~~~~~~a~~~a~al~~gGi~~iEvt~~t~~a~e~I~~l~~~~~~~~iGaGTVl--t~~~a~~Ai~AGA~fIv 111 (232)
T 4e38_A 34 LKVIPVIAIDNAEDIIPLGKVLAENGLPAAEITFRSDAAVEAIRLLRQAQPEMLIGAGTIL--NGEQALAAKEAGATFVV 111 (232)
T ss_dssp HCEEEEECCSSGGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTCEEEEECCC--SHHHHHHHHHHTCSEEE
T ss_pred CCEEEEEEcCCHHHHHHHHHHHHHCCCCEEEEeCCCCCHHHHHHHHHHhCCCCEEeECCcC--CHHHHHHHHHcCCCEEE
Confidence 367777888999999998887765 999999977665410 0 112233321 2333332
Q ss_pred -------HHHHHHhcccccEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCC-cHHHHHHHHhhC-CCc
Q psy4398 160 -------ILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRN-RIEMIRTLTQHL-KIP 230 (306)
Q Consensus 160 -------iv~~v~~~~~~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~-~~~~v~~i~~~~-~ip 230 (306)
+++..++. ++|+...+. +..-+..+.++|+|+|-+.... +. ..++++.++..+ ++|
T Consensus 112 sP~~~~~vi~~~~~~-gi~~ipGv~-------TptEi~~A~~~Gad~vK~FPa~-------~~gG~~~lkal~~p~p~ip 176 (232)
T 4e38_A 112 SPGFNPNTVRACQEI-GIDIVPGVN-------NPSTVEAALEMGLTTLKFFPAE-------ASGGISMVKSLVGPYGDIR 176 (232)
T ss_dssp CSSCCHHHHHHHHHH-TCEEECEEC-------SHHHHHHHHHTTCCEEEECSTT-------TTTHHHHHHHHHTTCTTCE
T ss_pred eCCCCHHHHHHHHHc-CCCEEcCCC-------CHHHHHHHHHcCCCEEEECcCc-------cccCHHHHHHHHHHhcCCC
Confidence 22222221 334333332 2233344567999999886431 22 468999999988 799
Q ss_pred EEEecCCCCHHHHHHHHHhhh---hhccccC
Q psy4398 231 VIANGGSKEIVDYGGVFSLNC---AFLRNHY 258 (306)
Q Consensus 231 via~GGI~s~~~~~~~l~~~v---~vGrall 258 (306)
+++.|||+ ++++.+.++.+. .+|+.+.
T Consensus 177 ~~ptGGI~-~~n~~~~l~aGa~~~vgGs~l~ 206 (232)
T 4e38_A 177 LMPTGGIT-PSNIDNYLAIPQVLACGGTWMV 206 (232)
T ss_dssp EEEBSSCC-TTTHHHHHTSTTBCCEEECGGG
T ss_pred eeeEcCCC-HHHHHHHHHCCCeEEEECchhc
Confidence 99999996 899999998754 5566655
No 230
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=97.23 E-value=0.00022 Score=63.19 Aligned_cols=69 Identities=10% Similarity=-0.040 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhh---hhccccCC
Q psy4398 183 ADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNC---AFLRNHYP 259 (306)
Q Consensus 183 ~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v---~vGrall~ 259 (306)
.+..++|+.+++.|++.+++-+-+. .+.+.++++.+.+.+||...|||++. ++++++ .|+ .+|++++.
T Consensus 38 ~dp~~~A~~~~~~Ga~~l~vvDL~~-------~n~~~i~~i~~~~~~pv~vgGGir~~-~~~~~l-~Ga~~Viigs~a~~ 108 (260)
T 2agk_A 38 HPSSYYAKLYKDRDVQGCHVIKLGP-------NNDDAAREALQESPQFLQVGGGINDT-NCLEWL-KWASKVIVTSWLFT 108 (260)
T ss_dssp CCHHHHHHHHHHTTCTTCEEEEESS-------SCHHHHHHHHHHSTTTSEEESSCCTT-THHHHT-TTCSCEEECGGGBC
T ss_pred CCHHHHHHHHHHcCCCEEEEEeCCC-------CCHHHHHHHHhcCCceEEEeCCCCHH-HHHHHh-cCCCEEEECcHHHh
Confidence 3578999999999999999854432 47899999999999999999999987 999999 865 99999999
Q ss_pred C
Q psy4398 260 V 260 (306)
Q Consensus 260 ~ 260 (306)
|
T Consensus 109 ~ 109 (260)
T 2agk_A 109 K 109 (260)
T ss_dssp T
T ss_pred h
Confidence 8
No 231
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=97.22 E-value=0.003 Score=56.31 Aligned_cols=126 Identities=9% Similarity=-0.009 Sum_probs=81.6
Q ss_pred HHHHHHHHhcCCCEEEEccCCCccccccCCcccccc---CChHHHHHHHHHHHhcccccEEEEecc--C-CChHH-HHHH
Q psy4398 116 ALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALL---STPDIACNILTTLISNLSIPVSCKIRV--F-HNEAD-TIAL 188 (306)
Q Consensus 116 ~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~---~~~~~~~eiv~~v~~~~~~pv~vKir~--g-~~~~~-~~~~ 188 (306)
..++...++.|+|.||+=+. +|.... .+.+.+.+-++++++.++ +..+|+=+ + .+.++ ....
T Consensus 103 ~~Ea~~Av~~GAdEIDmVin----------ig~lk~~~~g~~~~V~~eI~~v~~a~~-~~~lKVIlEt~~Lt~~e~i~~A 171 (297)
T 4eiv_A 103 SLEAVGALKDGADEIECLID----------WRRMNENVADGESRIRLLVSEVKKVVG-PKTLKVVLSGGELQGGDIISRA 171 (297)
T ss_dssp HHHHHHHHHTTCSEEEEECC----------THHHHHCHHHHHHHHHHHHHHHHHHHT-TSEEEEECCSSCCCCHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEeeee----------HHHHhcccCCcHHHHHHHHHHHHHHhc-CCceEEEEecccCCcHHHHHHH
Confidence 44555556679999997322 333333 466778888888888874 44556543 2 23344 5788
Q ss_pred HHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhC------------------------CCcEEEe-cCCCCHHHH
Q psy4398 189 CKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHL------------------------KIPVIAN-GGSKEIVDY 243 (306)
Q Consensus 189 a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~------------------------~ipvia~-GGI~s~~~~ 243 (306)
++.+.++|+|+|--+-. ...+.+.++.++.+++.+ ++-|=++ |||+|.+++
T Consensus 172 ~~ia~~AGADFVKTSTG----f~~~gAT~edV~lM~~~v~~~~~~~~~~~~~~~~~~~~~tg~~vgvKAs~GGIrt~e~A 247 (297)
T 4eiv_A 172 AVAALEGGADFLQTSSG----LGATHATMFTVHLISIALREYMVRENERIRVEGINREGAAVRCIGIKIEVGDVHMAETA 247 (297)
T ss_dssp HHHHHHHTCSEEECCCS----SSSCCCCHHHHHHHHHHHHHHHCC------------------CCEEEEECTTCCHHHHH
T ss_pred HHHHHHhCCCEEEcCCC----CCCCCCCHHHHHHHHHHHHHHhccccccccccccccccccCCceeEEecCCCCCCHHHH
Confidence 89999999999975322 222234444444443332 4778898 999999999
Q ss_pred HHHHHhhhhhccc
Q psy4398 244 GGVFSLNCAFLRN 256 (306)
Q Consensus 244 ~~~l~~~v~vGra 256 (306)
.++++..-.+|..
T Consensus 248 ~~~i~~~~elG~~ 260 (297)
T 4eiv_A 248 DFLMQMIFENGPR 260 (297)
T ss_dssp HHHHHHHHHHCGG
T ss_pred HHHHHHHHHhCcc
Confidence 9998854336655
No 232
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=97.20 E-value=0.0089 Score=53.92 Aligned_cols=188 Identities=15% Similarity=0.133 Sum_probs=106.4
Q ss_pred ccccCCceEEccCCCCCCHHHHHHHHHcCCCEEEecceechhhhhhhhhhhcccccccccCCCCCceeeecCCCCCCceE
Q psy4398 26 NINYSNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDGSVVFRTCPREKNKII 105 (306)
Q Consensus 26 ~l~l~n~i~lAPm~~~t~~~~r~~~~~~G~g~~~te~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~i 105 (306)
.+.-+...+..|.+ -|.....++.+.|+..+++...+... ..+.+. .+.++-.+.+.- -+.+.+. .+.|++
T Consensus 23 ~l~~~~~~i~~~~a--yD~~sA~l~e~aG~dai~vs~~s~a~-~~G~pD-~~~vt~~em~~~--~~~I~r~---~~~pvi 93 (305)
T 3ih1_A 23 ALVEANEILQIPGA--HDAMAALVARNTGFLALYLSGAAYTA-SKGLPD-LGIVTSTEVAER--ARDLVRA---TDLPVL 93 (305)
T ss_dssp HHHHSSSCEEEEBC--SSHHHHHHHHHTTCSCEEECHHHHHH-HHTCCS-SSCSCHHHHHHH--HHHHHHH---HCCCEE
T ss_pred HHHhCCCcEEEecC--cCHHHHHHHHHcCCCEEEECcHHHHH-hCCCCC-CCcCCHHHHHHH--HHHHHHh---cCCCEE
Confidence 33334445555544 56667777778999777765422111 111110 011100000000 0111112 246888
Q ss_pred EEec-C-CCHHHHHHHHHHHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEeccC---
Q psy4398 106 LQIG-T-ADPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVF--- 179 (306)
Q Consensus 106 vql~-g-~~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g--- 179 (306)
+-+- | .++++..+.++.+. .|+++|.|.=+...+ +.+..++.-.-..+...+-|++++++ +.++.+--|..
T Consensus 94 aD~d~Gyg~~~~v~~~v~~l~~aGaagv~iED~~~~k--rcGh~~gk~l~~~~e~~~rI~Aa~~A-~~~~~I~ARtda~~ 170 (305)
T 3ih1_A 94 VDIDTGFGGVLNVARTAVEMVEAKVAAVQIEDQQLPK--KCGHLNGKKLVTTEELVQKIKAIKEV-APSLYIVARTDARG 170 (305)
T ss_dssp EECTTCSSSHHHHHHHHHHHHHTTCSEEEEECBCSSC--CTTCTTCCCBCCHHHHHHHHHHHHHH-CTTSEEEEEECCHH
T ss_pred EECCCCCCCHHHHHHHHHHHHHhCCcEEEECCCCCCc--ccCCCCCCcccCHHHHHHHHHHHHHc-CCCeEEEEeecccc
Confidence 8763 2 35777788888775 599999997553211 11111222223444455555666655 55555554431
Q ss_pred -CChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEe
Q psy4398 180 -HNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIAN 234 (306)
Q Consensus 180 -~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~ 234 (306)
...+++++=+++++++|+|.|.+.+. .+.+.++++.+.+++|+++|
T Consensus 171 ~~g~~~ai~Ra~ay~eAGAD~i~~e~~---------~~~~~~~~i~~~~~~P~~~n 217 (305)
T 3ih1_A 171 VEGLDEAIERANAYVKAGADAIFPEAL---------QSEEEFRLFNSKVNAPLLAN 217 (305)
T ss_dssp HHCHHHHHHHHHHHHHHTCSEEEETTC---------CSHHHHHHHHHHSCSCBEEE
T ss_pred ccCHHHHHHHHHHHHHcCCCEEEEcCC---------CCHHHHHHHHHHcCCCEEEe
Confidence 23567889999999999999999764 25689999999999999876
No 233
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=97.19 E-value=0.0049 Score=57.81 Aligned_cols=111 Identities=17% Similarity=0.199 Sum_probs=89.8
Q ss_pred HHHHHHHHHH-Hhc-CCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc-cccEEEEeccCCChHHHHHHH
Q psy4398 113 PERALEAAKK-VEH-DVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL-SIPVSCKIRVFHNEADTIALC 189 (306)
Q Consensus 113 ~~~~~~aa~~-~~~-g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~g~~~~~~~~~a 189 (306)
++++++.++. +++ ||..+-+.+|. +++.-.+.++++|+.+ +.++.+....+|+.+++.+++
T Consensus 169 ~e~~~~~a~~~~~~~G~~~~K~KvG~----------------~~~~d~~~v~avR~~~~~~~l~vDaN~~w~~~~A~~~~ 232 (398)
T 4dye_A 169 PKAMAEHAVRVVEEGGFDAVKLKGTT----------------DCAGDVAILRAVREALPGVNLRVDPNAAWSVPDSVRAG 232 (398)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEEECCS----------------CHHHHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCEEEEecCC----------------CHHHHHHHHHHHHHhCCCCeEEeeCCCCCCHHHHHHHH
Confidence 5777776664 467 99999997651 3445567788888887 567778777789999999999
Q ss_pred HHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHh
Q psy4398 190 KRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSL 249 (306)
Q Consensus 190 ~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~ 249 (306)
+.+++.|+.+|- ++. + +++..+++++.+++||.+...+.+..+++++++.
T Consensus 233 ~~l~~~~i~~iE-------qP~--~-d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~ 282 (398)
T 4dye_A 233 IALEELDLEYLE-------DPC--V-GIEGMAQVKAKVRIPLCTNMCVVRFEDFAPAMRL 282 (398)
T ss_dssp HHHGGGCCSEEE-------CCS--S-HHHHHHHHHHHCCSCEEESSSCCSGGGHHHHHHT
T ss_pred HHHhhcCCCEEc-------CCC--C-CHHHHHHHHhhCCCCEEeCCcCCCHHHHHHHHHh
Confidence 999999999884 222 2 7888999999999999999999999999999875
No 234
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=97.17 E-value=0.021 Score=53.05 Aligned_cols=205 Identities=14% Similarity=0.103 Sum_probs=118.1
Q ss_pred cccccccccc---CCceEEccCC--CCCCHH----HHHHHHHcCCCEEEecceechhhhh--h--hhhhh-------ccc
Q psy4398 20 ANANQANINY---SNKIILAPMV--RMNTLP----FRLLALDYGADLVYSEELVDHKLVK--T--ERKVN-------DLL 79 (306)
Q Consensus 20 ~~~~~~~l~l---~n~i~lAPm~--~~t~~~----~r~~~~~~G~g~~~te~~~~~~~~~--~--~~~~~-------~~l 79 (306)
..++|++..+ ..++++|=+. ...+.. +...++++||+.+=-.+..++.+.. . ....+ .++
T Consensus 14 ~~~~~~~~~ig~~~~~~IIAEiG~NH~Gsle~A~~li~~Ak~aGAdavKfQ~~k~~tl~s~~~~~fq~~~~~~~~~ye~~ 93 (385)
T 1vli_A 14 AAFQIANKTVGKDAPVFIIAEAGINHDGKLDQAFALIDAAAEAGADAVKFQMFQADRMYQKDPGLYKTAAGKDVSIFSLV 93 (385)
T ss_dssp CEEEETTEEEETTSCCEEEEEEETTTTTCHHHHHHHHHHHHHHTCSEEEECCBCGGGGTSCCC---------CCCHHHHG
T ss_pred hheeECCEEeCCCCCcEEEEeecCcccccHHHHHHHHHHHHHhCCCEEeeeeeccCcccCcchhhhccCCCCCccHHHHH
Confidence 3457777666 4578888443 444444 2334678899887665555444211 0 00000 000
Q ss_pred ccccccCCCCCceeeecCCCCCCceEEEecCCCHHHHHHHHHHHhc-CCCEEEEccCCCccccccCCccccccCChHHHH
Q psy4398 80 NTIDFVDPLDGSVVFRTCPREKNKIILQIGTADPERALEAAKKVEH-DVAAIDINMGCPKQFSLTGGMGAALLSTPDIAC 158 (306)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~p~ivql~g~~~~~~~~aa~~~~~-g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~ 158 (306)
...++.. ..++.+.+.+.+.|.+++-..+- . +.++.+++ ++|.+.| |+.-+++..++.
T Consensus 94 ~~~~l~~-e~~~~L~~~~~~~Gi~~~stpfD--~----~svd~l~~~~vd~~KI--------------gS~~~~N~pLL~ 152 (385)
T 1vli_A 94 QSMEMPA-EWILPLLDYCREKQVIFLSTVCD--E----GSADLLQSTSPSAFKI--------------ASYEINHLPLLK 152 (385)
T ss_dssp GGBSSCG-GGHHHHHHHHHHTTCEEECBCCS--H----HHHHHHHTTCCSCEEE--------------CGGGTTCHHHHH
T ss_pred HhcCCCH-HHHHHHHHHHHHcCCcEEEccCC--H----HHHHHHHhcCCCEEEE--------------CcccccCHHHHH
Confidence 0001110 01233444454555555444322 1 12233333 5677766 445556777655
Q ss_pred HHHHHHHhcccccEEEEeccCCChHHHHHHHHHHHHcCC-cEEEEcccCCCCCCCCCCcHHHHHHHHhhC-CCcEEEecC
Q psy4398 159 NILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGI-IAIGVHGRTKAERPRHRNRIEMIRTLTQHL-KIPVIANGG 236 (306)
Q Consensus 159 eiv~~v~~~~~~pv~vKir~g~~~~~~~~~a~~l~~~G~-d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~-~ipvia~GG 236 (306)
++. ..+.||.+|.... +.+++...++.+.+.|. +.+.+|+.+.-.......|+..+..+++.+ ++||..++=
T Consensus 153 ~va-----~~gKPViLStGma-Tl~Ei~~Ave~i~~~Gn~~iiLlhc~s~YPtp~~~~nL~aI~~Lk~~f~~lpVG~SdH 226 (385)
T 1vli_A 153 YVA-----RLNRPMIFSTAGA-EISDVHEAWRTIRAEGNNQIAIMHCVAKYPAPPEYSNLSVIPMLAAAFPEAVIGFSDH 226 (385)
T ss_dssp HHH-----TTCSCEEEECTTC-CHHHHHHHHHHHHTTTCCCEEEEEECSSSSCCGGGCCTTHHHHHHHHSTTSEEEEEEC
T ss_pred HHH-----hcCCeEEEECCCC-CHHHHHHHHHHHHHCCCCcEEEEeccCCCCCChhhcCHHHHHHHHHHcCCCCEEeCCC
Confidence 543 3589999999975 88899999999999998 666678754433333346889999999999 999977755
Q ss_pred CCC-HHHHHHHHHhhh
Q psy4398 237 SKE-IVDYGGVFSLNC 251 (306)
Q Consensus 237 I~s-~~~~~~~l~~~v 251 (306)
-.. +.-...++..|+
T Consensus 227 t~G~~~~~~AAvAlGA 242 (385)
T 1vli_A 227 SEHPTEAPCAAVRLGA 242 (385)
T ss_dssp CSSSSHHHHHHHHTTC
T ss_pred CCCchHHHHHHHHcCC
Confidence 433 555555555554
No 235
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=97.15 E-value=0.0078 Score=53.77 Aligned_cols=138 Identities=12% Similarity=0.095 Sum_probs=91.7
Q ss_pred CCCceEEEecCCCHHHHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEecc-
Q psy4398 100 EKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRV- 178 (306)
Q Consensus 100 ~~~p~ivql~g~~~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~- 178 (306)
.+.|+++.+-+... +..+.+.++.||.-|.+..|. -.++++.+...++++...+ .+++|-.-+..
T Consensus 73 ~~VPValHlDHg~~--~e~i~~ai~~GFtSVMiDgS~-----------lp~eeNi~~Tk~vv~~ah~-~gvsVEaElG~v 138 (286)
T 1gvf_A 73 YNMPLALHLDHHES--LDDIRRKVHAGVRSAMIDGSH-----------FPFAENVKLVKSVVDFCHS-QDCSVEAELGRL 138 (286)
T ss_dssp TTSCBEEEEEEECC--HHHHHHHHHTTCCEEEECCTT-----------SCHHHHHHHHHHHHHHHHH-TTCEEEEEESCC
T ss_pred CCCcEEEEcCCCCC--HHHHHHHHHcCCCeEEECCCC-----------CCHHHHHHHHHHHHHHHHH-cCCEEEEEEeec
Confidence 45778877755421 233333345688888886442 2345677888888887765 46666666664
Q ss_pred CC-C-----------hHHHHHHHHHHHHcCCcEEEEcccCCCCCCCC--CCcHHHHHHHHhhCCCcEEEecCCCC-HHHH
Q psy4398 179 FH-N-----------EADTIALCKRLEACGIIAIGVHGRTKAERPRH--RNRIEMIRTLTQHLKIPVIANGGSKE-IVDY 243 (306)
Q Consensus 179 g~-~-----------~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~--p~~~~~v~~i~~~~~ipvia~GGI~s-~~~~ 243 (306)
|. . ..+..+..+.+++.|+|.|-+.=.+..+.|.+ ..+++.+++|++.+++|++..||-.. .++.
T Consensus 139 gg~ed~~~~~~~~~~~T~Peea~~Fv~~TgvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~~~~vpLVlHGgSG~~~e~i 218 (286)
T 1gvf_A 139 GGVEDDMSVDAESAFLTDPQEAKRFVELTGVDSLAVAIGTAHGLYSKTPKIDFQRLAEIREVVDVPLVLHGASDVPDEFV 218 (286)
T ss_dssp C-----------CCSSCCHHHHHHHHHHHCCSEEEECSSCCSSCCSSCCCCCHHHHHHHHHHCCSCEEECCCTTCCHHHH
T ss_pred cCcccCcccccccccCCCHHHHHHHHHHHCCCEEEeecCccccCcCCCCccCHHHHHHHHHhcCCCEEEECCCCCCHHHH
Confidence 11 0 12345556666679999998755554444433 35789999999999999999998764 5567
Q ss_pred HHHHHhhh
Q psy4398 244 GGVFSLNC 251 (306)
Q Consensus 244 ~~~l~~~v 251 (306)
+++++.|+
T Consensus 219 ~~ai~~Gv 226 (286)
T 1gvf_A 219 RRTIELGV 226 (286)
T ss_dssp HHHHHTTE
T ss_pred HHHHHCCC
Confidence 88888765
No 236
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=97.13 E-value=0.0017 Score=55.71 Aligned_cols=135 Identities=16% Similarity=0.062 Sum_probs=84.7
Q ss_pred ceEEEecCCCHHHHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc-c--ccEEEEeccC
Q psy4398 103 KIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL-S--IPVSCKIRVF 179 (306)
Q Consensus 103 p~ivql~g~~~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~--~pv~vKir~g 179 (306)
++++.+--.+.++..+.++.+..|+|.+|+.+- |+ ...-.++++++|+.. + +++++|+-
T Consensus 8 ~lilalD~~~~~~~~~~~~~~~~~vd~ie~g~~-~~---------------~~~G~~~i~~lr~~~~~~~i~ld~~l~-- 69 (218)
T 3jr2_A 8 MIQIALDQTNLTDAVAVASNVASYVDVIEVGTI-LA---------------FAEGMKAVSTLRHNHPNHILVCDMKTT-- 69 (218)
T ss_dssp EEEEEECCSSHHHHHHHHHHHGGGCSEEEECHH-HH---------------HHHTTHHHHHHHHHCTTSEEEEEEEEC--
T ss_pred CeEEEeCCCCHHHHHHHHHHhcCCceEEEeCcH-HH---------------HhcCHHHHHHHHHhCCCCcEEEEEeec--
Confidence 577788778888888888877668999999641 11 111135677777663 3 44566765
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEcccCC---------------------C---------------C-CC-----------
Q psy4398 180 HNEADTIALCKRLEACGIIAIGVHGRTK---------------------A---------------E-RP----------- 211 (306)
Q Consensus 180 ~~~~~~~~~a~~l~~~G~d~i~v~~~~~---------------------~---------------~-~~----------- 211 (306)
... ..+++.+.++|+|.+++|+-.. - + .|
T Consensus 70 d~p---~~~~~~~~~aGad~i~vh~~~~~~~~~~~~~~~~~~g~~~~~d~l~~~T~~~~~~~~~~g~d~v~~~~~~~~~~ 146 (218)
T 3jr2_A 70 DGG---AILSRMAFEAGADWITVSAAAHIATIAACKKVADELNGEIQIEIYGNWTMQDAKAWVDLGITQAIYHRSRDAEL 146 (218)
T ss_dssp SCH---HHHHHHHHHHTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEEECCSSCCHHHHHHHHHTTCCEEEEECCHHHHH
T ss_pred ccH---HHHHHHHHhcCCCEEEEecCCCHHHHHHHHHHHHHhCCccceeeeecCCHHHHHHHHHcCccceeeeecccccc
Confidence 222 2255666777777777764210 0 0 00
Q ss_pred CC-CCcHHHHHHHHhh--CCCcEEEecCCCCHHHHHHHHHhh---hhhccccCC
Q psy4398 212 RH-RNRIEMIRTLTQH--LKIPVIANGGSKEIVDYGGVFSLN---CAFLRNHYP 259 (306)
Q Consensus 212 ~~-p~~~~~v~~i~~~--~~ipvia~GGI~s~~~~~~~l~~~---v~vGrall~ 259 (306)
.+ ....+.+..+++. .++|+++.|||+ ++++.++++.| +.+||+++.
T Consensus 147 ~g~~~~~~~l~~i~~~~~~~~pi~v~GGI~-~~~~~~~~~aGAd~vvvGsaI~~ 199 (218)
T 3jr2_A 147 AGIGWTTDDLDKMRQLSALGIELSITGGIV-PEDIYLFEGIKTKTFIAGRALAG 199 (218)
T ss_dssp HTCCSCHHHHHHHHHHHHTTCEEEEESSCC-GGGGGGGTTSCEEEEEESGGGSH
T ss_pred CCCcCCHHHHHHHHHHhCCCCCEEEECCCC-HHHHHHHHHcCCCEEEEchhhcC
Confidence 00 0122344555554 379999999995 88888888875 499999985
No 237
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=97.11 E-value=0.00048 Score=67.55 Aligned_cols=77 Identities=13% Similarity=0.160 Sum_probs=60.7
Q ss_pred HHHHHHHHHHHHcCCcEEEEcccCCC--CCCCCCCcHHHHHHHHhhCCCcEEEecCCCCH-----------HHHHHHHHh
Q psy4398 183 ADTIALCKRLEACGIIAIGVHGRTKA--ERPRHRNRIEMIRTLTQHLKIPVIANGGSKEI-----------VDYGGVFSL 249 (306)
Q Consensus 183 ~~~~~~a~~l~~~G~d~i~v~~~~~~--~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~-----------~~~~~~l~~ 249 (306)
.+..++|+.+++.|+|.|++.+.+.. +....+.+++.++++++.+.+||+..|||++. ++++++++.
T Consensus 280 ~dp~~~A~~~~~~Ga~~l~~~dl~~~~~~~~~~~~~~~~i~~i~~~~~ipi~vgGGIr~~~d~~~~~~~~~~~a~~~l~a 359 (555)
T 1jvn_A 280 GKPVQLAQKYYQQGADEVTFLNITSFRDCPLKDTPMLEVLKQAAKTVFVPLTVGGGIKDIVDVDGTKIPALEVASLYFRS 359 (555)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEEEC---CCCGGGCHHHHHHHHHTTTCCSCEEEESSCSCEECTTCCEECHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCEEEEEeCCccccccCCCchHHHHHHHHHhhCCCcEEEeCccccchhcccccchHHHHHHHHHHc
Confidence 47899999999999999998665432 12223346899999999999999999999998 559999988
Q ss_pred hh---hhccccCC
Q psy4398 250 NC---AFLRNHYP 259 (306)
Q Consensus 250 ~v---~vGrall~ 259 (306)
|+ .+|++.+.
T Consensus 360 Gad~V~igt~~~~ 372 (555)
T 1jvn_A 360 GADKVSIGTDAVY 372 (555)
T ss_dssp TCSEEEECHHHHH
T ss_pred CCCEEEECCHHhh
Confidence 65 88887655
No 238
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=97.06 E-value=0.0028 Score=54.31 Aligned_cols=141 Identities=15% Similarity=0.217 Sum_probs=86.9
Q ss_pred CceEEEecCCCHHHHHHHHHHHhc-CCCEEEEccCCCccc-----c------ccCCccccccCChHHHH-----------
Q psy4398 102 NKIILQIGTADPERALEAAKKVEH-DVAAIDINMGCPKQF-----S------LTGGMGAALLSTPDIAC----------- 158 (306)
Q Consensus 102 ~p~ivql~g~~~~~~~~aa~~~~~-g~d~veln~gcP~~~-----~------~~~~~G~~l~~~~~~~~----------- 158 (306)
.|++.=|-+.+++++.+.++.+.+ |++.||+-+-.|... . ...++|. +.. .+.+.
T Consensus 16 ~~~i~v~r~~~~~~~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~~~~~vgagt-vi~-~d~~~~A~~aGAd~v~ 93 (214)
T 1wbh_A 16 GPVVPVIVVKKLEHAVPMAKALVAGGVRVLNVTLRTECAVDAIRAIAKEVPEAIVGAGT-VLN-PQQLAEVTEAGAQFAI 93 (214)
T ss_dssp CSEEEEECCSSGGGHHHHHHHHHHTTCCEEEEESCSTTHHHHHHHHHHHCTTSEEEEES-CCS-HHHHHHHHHHTCSCEE
T ss_pred CCEEEEEECCCHHHHHHHHHHHHHcCCCEEEEeCCChhHHHHHHHHHHHCcCCEEeeCE-EEE-HHHHHHHHHcCCCEEE
Confidence 478888888888888888887755 899999976544310 0 0122332 211 12211
Q ss_pred ------HHHHHHHhcccccEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCC-cHHHHHHHHhhC-CCc
Q psy4398 159 ------NILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRN-RIEMIRTLTQHL-KIP 230 (306)
Q Consensus 159 ------eiv~~v~~~~~~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~-~~~~v~~i~~~~-~ip 230 (306)
++++..++ .+.++...+. + ..-+..+.+.|+|+|-++.. .+. ..+++++++..+ ++|
T Consensus 94 ~p~~d~~v~~~~~~-~g~~~i~G~~---t----~~e~~~A~~~Gad~v~~Fpa-------~~~gG~~~lk~i~~~~~~ip 158 (214)
T 1wbh_A 94 SPGLTEPLLKAATE-GTIPLIPGIS---T----VSELMLGMDYGLKEFKFFPA-------EANGGVKALQAIAGPFSQVR 158 (214)
T ss_dssp ESSCCHHHHHHHHH-SSSCEEEEES---S----HHHHHHHHHTTCCEEEETTT-------TTTTHHHHHHHHHTTCTTCE
T ss_pred cCCCCHHHHHHHHH-hCCCEEEecC---C----HHHHHHHHHCCCCEEEEecC-------ccccCHHHHHHHhhhCCCCe
Confidence 12222211 2334433322 2 22235556789999998541 122 368999999999 899
Q ss_pred EEEecCCCCHHHHHHHHHh-hh---hhccccCCCC
Q psy4398 231 VIANGGSKEIVDYGGVFSL-NC---AFLRNHYPVE 261 (306)
Q Consensus 231 via~GGI~s~~~~~~~l~~-~v---~vGrall~~p 261 (306)
+++.|||+ ++++.+.++. ++ . |++++..+
T Consensus 159 vvaiGGI~-~~n~~~~l~agg~~~v~-gS~i~~~~ 191 (214)
T 1wbh_A 159 FCPTGGIS-PANYRDYLALKSVLCIG-GSWLVPAD 191 (214)
T ss_dssp EEEBSSCC-TTTHHHHHTSTTBSCEE-EGGGSCHH
T ss_pred EEEECCCC-HHHHHHHHhcCCCeEEE-eccccChh
Confidence 99999996 6889999887 44 5 88887543
No 239
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=97.03 E-value=0.012 Score=51.51 Aligned_cols=131 Identities=17% Similarity=0.142 Sum_probs=87.1
Q ss_pred CCHHHHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEecc------------
Q psy4398 111 ADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRV------------ 178 (306)
Q Consensus 111 ~~~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~------------ 178 (306)
.+|.++ |+..+.|+++|-+-.- .+.|||++ +-++++++.++.||..|-=+
T Consensus 64 ~dp~~i---A~~~~~GA~aiSVLTd-------~~~F~Gs~--------~~L~~vr~~v~lPvLrKDFiid~yQI~eAr~~ 125 (258)
T 4a29_A 64 RDPIEY---AKFMERYAVGLSITTE-------EKYFNGSY--------ETLRKIASSVSIPILMSDFIVKESQIDDAYNL 125 (258)
T ss_dssp CCHHHH---HHHHTTTCSEEEEECC-------STTTCCCH--------HHHHHHHTTCSSCEEEESCCCSHHHHHHHHHH
T ss_pred CCHHHH---HHHHhCCCeEEEEeCC-------CCCCCCCH--------HHHHHHHHhcCCCEeeccccccHHHHHHHHHc
Confidence 355443 4444469999887311 13456553 33577788899999888321
Q ss_pred C----------CChHHHHHHHHHHHHcCCcEEE-Ecc-------------------cCCCCCCCCCCcHHHHHHHHhhC-
Q psy4398 179 F----------HNEADTIALCKRLEACGIIAIG-VHG-------------------RTKAERPRHRNRIEMIRTLTQHL- 227 (306)
Q Consensus 179 g----------~~~~~~~~~a~~l~~~G~d~i~-v~~-------------------~~~~~~~~~p~~~~~v~~i~~~~- 227 (306)
| .+.++..++.+.+.+.|.+.++ +|. |.-. .-..+++...++.+.+
T Consensus 126 GADaILLI~a~L~~~~l~~l~~~A~~lGl~~LvEVh~~~El~rAl~~~a~iIGINNRnL~---tf~vdl~~t~~L~~~ip 202 (258)
T 4a29_A 126 GADTVLLIVKILTERELESLLEYARSYGMEPLILINDENDLDIALRIGARFIGIMSRDFE---TGEINKENQRKLISMIP 202 (258)
T ss_dssp TCSEEEEEGGGSCHHHHHHHHHHHHHTTCCCEEEESSHHHHHHHHHTTCSEEEECSBCTT---TCCBCHHHHHHHHTTSC
T ss_pred CCCeeehHHhhcCHHHHHHHHHHHHHHhHHHHHhcchHHHHHHHhcCCCcEEEEeCCCcc---ccccCHHHHHHHHhhCC
Confidence 1 1234456666666666666554 433 2211 1124778888898887
Q ss_pred -CCcEEEecCCCCHHHHHHHHHhhh---hhccccCCCCC
Q psy4398 228 -KIPVIANGGSKEIVDYGGVFSLNC---AFLRNHYPVEK 262 (306)
Q Consensus 228 -~ipvia~GGI~s~~~~~~~l~~~v---~vGrall~~p~ 262 (306)
++.+|+-+||.+++|+..+.+.|+ .||.++++.|.
T Consensus 203 ~~~~~VsESGI~t~~dv~~l~~~G~~a~LVGealmr~~d 241 (258)
T 4a29_A 203 SNVVKVAKLGISERNEIEELRKLGVNAFLISSSLMRNPE 241 (258)
T ss_dssp TTSEEEEEESSCCHHHHHHHHHTTCCEEEECHHHHHCTT
T ss_pred CCCEEEEcCCCCCHHHHHHHHHCCCCEEEECHHHhCCCc
Confidence 688999999999999999998764 99999998775
No 240
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=97.00 E-value=0.012 Score=52.65 Aligned_cols=184 Identities=11% Similarity=0.072 Sum_probs=100.7
Q ss_pred ceEEccCCCCCCHHHHHHHHHcCCCEEEecceechhhhhhhhhhhcccccccccCCCCCceeeecCCCCCCceEEEec-C
Q psy4398 32 KIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDGSVVFRTCPREKNKIILQIG-T 110 (306)
Q Consensus 32 ~i~lAPm~~~t~~~~r~~~~~~G~g~~~te~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~ivql~-g 110 (306)
..+..|. .-|.....++.+.|+..+++...+.... .+.+. .+.++-.+... .........+.|+++-+- |
T Consensus 15 ~~i~~~~--a~D~~sA~~~~~aG~~ai~vs~~~~a~~-~G~pD-~~~vt~~em~~-----~~~~I~~~~~~PviaD~d~G 85 (290)
T 2hjp_A 15 RLFTAMA--AHNPLVAKLAEQAGFGGIWGSGFELSAS-YAVPD-ANILSMSTHLE-----MMRAIASTVSIPLIADIDTG 85 (290)
T ss_dssp CCEEEEE--CSSHHHHHHHHHHTCSEEEECHHHHHHH-TTSCT-TTCSCHHHHHH-----HHHHHHTTCSSCEEEECTTT
T ss_pred CcEEEec--CCCHHHHHHHHHcCCCEEEEChHHHHHh-CCCCC-CCCCCHHHHHH-----HHHHHHhcCCCCEEEECCCC
Confidence 3444444 3566677777789998888874221111 11110 01111000000 000111223568887762 2
Q ss_pred -CCHHHHHHHHHHHh-cCCCEEEEccCCCccccccCCcc--ccccCChHHHHHHHHHHHhcc---cccEEEEecc---CC
Q psy4398 111 -ADPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMG--AALLSTPDIACNILTTLISNL---SIPVSCKIRV---FH 180 (306)
Q Consensus 111 -~~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G--~~l~~~~~~~~eiv~~v~~~~---~~pv~vKir~---g~ 180 (306)
.++++..+.++++. .|+++|.|.=+...+ +....| +.-+-..+...+-|++++++. +.-|..|.-. +.
T Consensus 86 yg~~~~~~~~v~~l~~aGa~gv~iED~~~~k--~cgH~~~~~k~l~p~~e~~~kI~Aa~~a~~~~~~~i~aRtda~~a~~ 163 (290)
T 2hjp_A 86 FGNAVNVHYVVPQYEAAGASAIVMEDKTFPK--DTSLRTDGRQELVRIEEFQGKIAAATAARADRDFVVIARVEALIAGL 163 (290)
T ss_dssp TSSHHHHHHHHHHHHHHTCSEEEEECBCSSC--CC-------CCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTTTTTC
T ss_pred CCCHHHHHHHHHHHHHhCCeEEEEcCCCCCc--cccccccCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHhhccc
Confidence 27888888887665 599999997553111 112222 222223333344445554442 3334444432 12
Q ss_pred ChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCC--CcEEEe
Q psy4398 181 NEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLK--IPVIAN 234 (306)
Q Consensus 181 ~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~--ipvia~ 234 (306)
..+++++=++.++++|+|.|.+.++. .+.+.++++.+.++ +|+++|
T Consensus 164 g~~~ai~Ra~ay~eAGAd~i~~e~~~--------~~~~~~~~i~~~~~~~vP~i~n 211 (290)
T 2hjp_A 164 GQQEAVRRGQAYEEAGADAILIHSRQ--------KTPDEILAFVKSWPGKVPLVLV 211 (290)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEECCCC--------SSSHHHHHHHHHCCCSSCEEEC
T ss_pred cHHHHHHHHHHHHHcCCcEEEeCCCC--------CCHHHHHHHHHHcCCCCCEEEe
Confidence 35788999999999999999998732 24478899999998 999987
No 241
>2chr_A Chloromuconate cycloisomerase; 3.00A {Cupriavidus necator} SCOP: c.1.11.2 d.54.1.1
Probab=96.99 E-value=0.026 Score=52.08 Aligned_cols=123 Identities=14% Similarity=0.186 Sum_probs=92.3
Q ss_pred eEEEecC-CCHHHHHHHHHHHhc-CCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhccc--ccEEEEeccC
Q psy4398 104 IILQIGT-ADPERALEAAKKVEH-DVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLS--IPVSCKIRVF 179 (306)
Q Consensus 104 ~ivql~g-~~~~~~~~aa~~~~~-g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~--~pv~vKir~g 179 (306)
....+.. .++++..+.++.+.+ ||..+-+.+|.. +++.-.+.++++|+.++ ..+.+-...+
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~K~Kvg~~---------------~~~~d~~~v~avr~~~g~~~~l~vDaN~~ 198 (370)
T 2chr_A 134 IAWTLASGDTKRDLDSAVEMIERRRHNRFKVKLGFR---------------SPQDDLIHMEALSNSLGSKAYLRVDVNQA 198 (370)
T ss_dssp BEEEECSSCHHHHHHHHHHHHHTTSCCEEEEECSSS---------------CHHHHHHHHHHHHHHTTTTSEEEEECTTC
T ss_pred eeeeeccCchhhhHHHHHHHHhhcccceeecccccC---------------ChHHHHHHHHHHHHhcCCCcEEEecCCCC
Confidence 3334443 456677777777765 899998876532 34444566788888874 4455666667
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHh
Q psy4398 180 HNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSL 249 (306)
Q Consensus 180 ~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~ 249 (306)
|+.+++.++++.+++.++.++- ++. .+.+++..+++++.+++||.+-=.+.+..++.++++.
T Consensus 199 ~~~~~A~~~~~~l~~~~~~~iE-------eP~-~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~ 260 (370)
T 2chr_A 199 WDEQVASVYIPELEALGVELIE-------QPV-GRENTQALRRLSDNNRVAIMADESLSTLASAFDLARD 260 (370)
T ss_dssp CCTHHHHHHHHHHHTTTCCEEE-------CCS-CSSCHHHHHHHHHHCSSEEEESSSCCSHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHhcCCceec-------CCC-ChhhhhhhhHHhhhccCCccCCccCCCHHHHHHHHHc
Confidence 9999999999999999988763 222 3458899999999999999988889999999998875
No 242
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=96.96 E-value=0.014 Score=52.32 Aligned_cols=123 Identities=11% Similarity=0.121 Sum_probs=83.0
Q ss_pred CCHHHHHHHHHHH-hcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEeccCCChHHHHH
Q psy4398 111 ADPERALEAAKKV-EHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIRVFHNEADTIA 187 (306)
Q Consensus 111 ~~~~~~~~aa~~~-~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~ 187 (306)
-|.+.+.+..+.+ +.|.|+|-++-+. |-...-..+.-.++++.+.+.+ .+||.+-+.. .+..++++
T Consensus 18 iD~~~l~~lv~~li~~Gv~gl~~~Gtt----------GE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~-~~t~~ai~ 86 (292)
T 2vc6_A 18 IDEVALHDLVEWQIEEGSFGLVPCGTT----------GESPTLSKSEHEQVVEITIKTANGRVPVIAGAGS-NSTAEAIA 86 (292)
T ss_dssp ECHHHHHHHHHHHHHTTCSEEETTSGG----------GTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCC-SSHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccc----------cChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCC-ccHHHHHH
Confidence 4667777777765 4599999885331 2222223344455666655544 4789888773 46788999
Q ss_pred HHHHHHHcCCcEEEEcccCCCCCCCCCC---cHHHHHHHHhhCCCcEEE------ecCCCCHHHHHHHHH
Q psy4398 188 LCKRLEACGIIAIGVHGRTKAERPRHRN---RIEMIRTLTQHLKIPVIA------NGGSKEIVDYGGVFS 248 (306)
Q Consensus 188 ~a~~l~~~G~d~i~v~~~~~~~~~~~p~---~~~~v~~i~~~~~ipvia------~GGI~s~~~~~~~l~ 248 (306)
+++.+++.|+|++.+.... |..|. -.++.++|.+++++|||. .|---+++...++.+
T Consensus 87 la~~A~~~Gadavlv~~P~----y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 152 (292)
T 2vc6_A 87 FVRHAQNAGADGVLIVSPY----YNKPTQEGIYQHFKAIDAASTIPIIVYNIPGRSAIEIHVETLARIFE 152 (292)
T ss_dssp HHHHHHHTTCSEEEEECCC----SSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEcCCC----CCCCCHHHHHHHHHHHHHhCCCCEEEEeCccccCcCCCHHHHHHHHh
Confidence 9999999999999876432 32232 245667899999999887 444457888877765
No 243
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=96.96 E-value=0.034 Score=49.20 Aligned_cols=161 Identities=16% Similarity=0.205 Sum_probs=92.2
Q ss_pred CCCCHHHHHHHHHcCCCEEEecceechhhhhhhhhhhcccccccccCCCCCceeeecCCCCCCceEEEec--C--CCHHH
Q psy4398 40 RMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDGSVVFRTCPREKNKIILQIG--T--ADPER 115 (306)
Q Consensus 40 ~~t~~~~r~~~~~~G~g~~~te~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~ivql~--g--~~~~~ 115 (306)
+.-|.....++.+.|+..+.+....... ..+.+.. ..++-.+.+. .-+.+.+.. ...++++-+- + .++++
T Consensus 23 tayDa~sA~l~e~aG~d~ilvGdSl~~~-~lG~~dt-~~vTldemi~--h~~aV~r~~--~~~~vvaD~pfgsy~~s~~~ 96 (275)
T 1o66_A 23 TAYESSFAALMDDAGVEMLLVGDSLGMA-VQGRKST-LPVSLRDMCY--HTECVARGA--KNAMIVSDLPFGAYQQSKEQ 96 (275)
T ss_dssp ECCSHHHHHHHHHTTCCEEEECTTHHHH-TTCCSSS-TTCCHHHHHH--HHHHHHHHC--SSSEEEEECCTTSSSSCHHH
T ss_pred eCcCHHHHHHHHHcCCCEEEECHHHHHH-HcCCCCC-CCCCHHHHHH--HHHHHHhhC--CCCeEEEECCCCCccCCHHH
Confidence 3467888888889999988875321110 0010000 0000000000 000111111 1234555653 2 36777
Q ss_pred HHHHHHHH-hcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEecc--------------CC
Q psy4398 116 ALEAAKKV-EHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRV--------------FH 180 (306)
Q Consensus 116 ~~~aa~~~-~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~--------------g~ 180 (306)
..+.+.++ +.|+++|.|--+ +...+.|+++.++ ++||..-+.+ |-
T Consensus 97 a~~na~rl~kaGa~aVklEdg-------------------~e~~~~I~al~~a-gIpV~gHiGLtPQs~~~~ggf~v~gr 156 (275)
T 1o66_A 97 AFAAAAELMAAGAHMVKLEGG-------------------VWMAETTEFLQMR-GIPVCAHIGLTPQSVFAFGGYKVQGR 156 (275)
T ss_dssp HHHHHHHHHHTTCSEEEEECS-------------------GGGHHHHHHHHHT-TCCEEEEEESCGGGTTC---------
T ss_pred HHHHHHHHHHcCCcEEEECCc-------------------HHHHHHHHHHHHc-CCCeEeeeccCceeecccCCeEEEeC
Confidence 77666655 569999999521 1234455555543 7788743332 11
Q ss_pred --ChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecC
Q psy4398 181 --NEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGG 236 (306)
Q Consensus 181 --~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GG 236 (306)
..+++++=|++++++||+.|.+.+. | -+.+++|.+.+++|+|+.|.
T Consensus 157 t~~a~~~i~rA~a~~eAGA~~ivlE~v--------p--~~~a~~it~~l~iP~igIGa 204 (275)
T 1o66_A 157 GGKAQALLNDAKAHDDAGAAVVLMECV--------L--AELAKKVTETVSCPTIGIGA 204 (275)
T ss_dssp --CHHHHHHHHHHHHHTTCSEEEEESC--------C--HHHHHHHHHHCSSCEEEESS
T ss_pred hHHHHHHHHHHHHHHHcCCcEEEEecC--------C--HHHHHHHHHhCCCCEEEECC
Confidence 1356888899999999999998763 2 26789999999999999875
No 244
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=96.92 E-value=0.0024 Score=55.29 Aligned_cols=135 Identities=9% Similarity=0.056 Sum_probs=92.0
Q ss_pred CCceEEEecCCCHHHHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHH---HHHhcccccEEEEec
Q psy4398 101 KNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILT---TLISNLSIPVSCKIR 177 (306)
Q Consensus 101 ~~p~ivql~g~~~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~---~v~~~~~~pv~vKir 177 (306)
+.|+.+.|.-.+|+.|.+.. .. +|.+-+|..... .. +.+.++ .+++. +.-+.+-+.
T Consensus 64 ~~~~dvhLmv~dp~~~i~~~---~~-Ad~itvH~ea~~-------------~~---~~~~i~~~~~i~~~-G~k~gvaln 122 (227)
T 1tqx_A 64 SIFFDVHLMVEYPEKYVPLL---KT-SNQLTFHFEALN-------------ED---TERCIQLAKEIRDN-NLWCGISIK 122 (227)
T ss_dssp SCEEEEEEESSCGGGGGGGC---TT-SSEEEEEGGGGT-------------TC---HHHHHHHHHHHHTT-TCEEEEEEC
T ss_pred CCcEEEEEEEcCHHHHHHHH---Hh-CCEEEEeecCCc-------------cC---HHHHHHHHHHHHHc-CCeEEEEeC
Confidence 46899999999998776332 22 899999865411 02 234555 77653 554444444
Q ss_pred cCCChHHHHHHHHHHHHcC-CcEEEEccc---CCCCCCCCCCcHHHHHHHHhhC-CCcEEEecCCCCHHHHHHHHHhhh-
Q psy4398 178 VFHNEADTIALCKRLEACG-IIAIGVHGR---TKAERPRHRNRIEMIRTLTQHL-KIPVIANGGSKEIVDYGGVFSLNC- 251 (306)
Q Consensus 178 ~g~~~~~~~~~a~~l~~~G-~d~i~v~~~---~~~~~~~~p~~~~~v~~i~~~~-~ipvia~GGI~s~~~~~~~l~~~v- 251 (306)
+ .+..+.++.+.+.| +|.|.+-.. ...+.+ .|..++-++++++.. +++|.+-|||+ .+++.+++++|+
T Consensus 123 --p--~tp~~~~~~~l~~g~~D~VlvmsV~pGf~gq~f-~~~~l~ki~~lr~~~~~~~I~VdGGI~-~~ti~~~~~aGAd 196 (227)
T 1tqx_A 123 --P--KTDVQKLVPILDTNLINTVLVMTVEPGFGGQSF-MHDMMGKVSFLRKKYKNLNIQVDGGLN-IETTEISASHGAN 196 (227)
T ss_dssp --T--TSCGGGGHHHHTTTCCSEEEEESSCTTCSSCCC-CGGGHHHHHHHHHHCTTCEEEEESSCC-HHHHHHHHHHTCC
T ss_pred --C--CCcHHHHHHHhhcCCcCEEEEeeeccCCCCccc-chHHHHHHHHHHHhccCCeEEEECCCC-HHHHHHHHHcCCC
Confidence 2 22345556666666 999965443 333333 355788889999888 88999999998 889999998875
Q ss_pred --hhccccCCCCC
Q psy4398 252 --AFLRNHYPVEK 262 (306)
Q Consensus 252 --~vGrall~~p~ 262 (306)
.+||+++..+.
T Consensus 197 ~~V~GsaIf~~~d 209 (227)
T 1tqx_A 197 IIVAGTSIFNAED 209 (227)
T ss_dssp EEEESHHHHTCSS
T ss_pred EEEEeHHHhCCCC
Confidence 99999997544
No 245
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=96.89 E-value=0.026 Score=50.79 Aligned_cols=124 Identities=7% Similarity=0.077 Sum_probs=82.1
Q ss_pred CCCceEEEecCCCHHHHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEecc-
Q psy4398 100 EKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRV- 178 (306)
Q Consensus 100 ~~~p~ivql~g~~~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~- 178 (306)
.+.|+++.+-|.. ++..+.+.++.||.-|.+..|. ..++++.+...++++...+ .++.|-.-+..
T Consensus 71 ~~VPValHlDHg~--~~e~~~~ai~~GFtSVMiDgS~-----------~p~eENi~~Tk~vv~~ah~-~gvsVEaELG~v 136 (305)
T 1rvg_A 71 ARVPVAVHLDHGS--SYESVLRALRAGFTSVMIDKSH-----------EDFETNVRETRRVVEAAHA-VGVTVEAELGRL 136 (305)
T ss_dssp CSSCEEEEEEEEC--SHHHHHHHHHTTCSEEEECCTT-----------SCHHHHHHHHHHHHHHHHH-TTCEEEEEESCC
T ss_pred CCCcEEEECCCCC--CHHHHHHHHHcCCCeeeeCCCC-----------CCHHHHHHHHHHHHHHHHH-cCCEEEEEEeec
Confidence 4567888776542 2333334445688888886442 2355677788888877764 46666666664
Q ss_pred -C-CC----------hHHHHHHHHHHHHcCCcEEEEcccCCCCCCC----CCCcHHHHHHHHhhCCCcEEEecCC
Q psy4398 179 -F-HN----------EADTIALCKRLEACGIIAIGVHGRTKAERPR----HRNRIEMIRTLTQHLKIPVIANGGS 237 (306)
Q Consensus 179 -g-~~----------~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~----~p~~~~~v~~i~~~~~ipvia~GGI 237 (306)
| .+ ..+..+..+.+++.|+|.|-+.=.+..+.|. ...+++.+++|++.+++|++..||-
T Consensus 137 gg~Ed~~~~~~~~~~yT~Peea~~Fv~~TgvD~LAvaiGt~HG~Yk~~g~p~L~~~~L~~I~~~~~vpLVlHGgS 211 (305)
T 1rvg_A 137 AGIEEHVAVDEKDALLTNPEEARIFMERTGADYLAVAIGTSHGAYKGKGRPFIDHARLERIARLVPAPLVLHGAS 211 (305)
T ss_dssp CCSCC------CCTTCCCHHHHHHHHHHHCCSEEEECSSCCSSSBCSSSSCCCCHHHHHHHHHHCCSCEEECSCC
T ss_pred cCccCCccccccccccCCHHHHHHHHHHHCCCEEEEecCccccccCCCCCCccCHHHHHHHHHhcCCCEEEeCCC
Confidence 1 00 1234555556667899999876555444443 2358899999999999999999987
No 246
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=96.87 E-value=0.011 Score=53.34 Aligned_cols=123 Identities=14% Similarity=0.099 Sum_probs=82.0
Q ss_pred CCHHHHHHHHHHHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEeccCCChHHHHH
Q psy4398 111 ADPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIRVFHNEADTIA 187 (306)
Q Consensus 111 ~~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~ 187 (306)
-|.+.+.+..+.+. .|.|+|-++.+. |-...-..+.-.++++.+.+.+ .+||.+-+.. .+..++++
T Consensus 33 iD~~~l~~lv~~li~~Gv~gi~v~Gtt----------GE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~-~~t~~ai~ 101 (304)
T 3l21_A 33 LDTATAARLANHLVDQGCDGLVVSGTT----------GESPTTTDGEKIELLRAVLEAVGDRARVIAGAGT-YDTAHSIR 101 (304)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEEESSTT----------TTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCC-SCHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCccc----------cchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCCC-CCHHHHHH
Confidence 46677888777654 599999886442 1112223333455556555544 4788887753 56788999
Q ss_pred HHHHHHHcCCcEEEEcccCCCCCCCCCC---cHHHHHHHHhhCCCcEEEe------cCCCCHHHHHHHHH
Q psy4398 188 LCKRLEACGIIAIGVHGRTKAERPRHRN---RIEMIRTLTQHLKIPVIAN------GGSKEIVDYGGVFS 248 (306)
Q Consensus 188 ~a~~l~~~G~d~i~v~~~~~~~~~~~p~---~~~~v~~i~~~~~ipvia~------GGI~s~~~~~~~l~ 248 (306)
+++.+++.|+|++.+.... |..|. -.++.++|.+++++||+.= |---+++...++.+
T Consensus 102 la~~a~~~Gadavlv~~P~----y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 167 (304)
T 3l21_A 102 LAKACAAEGAHGLLVVTPY----YSKPPQRGLQAHFTAVADATELPMLLYDIPGRSAVPIEPDTIRALAS 167 (304)
T ss_dssp HHHHHHHHTCSEEEEECCC----SSCCCHHHHHHHHHHHHTSCSSCEEEEECHHHHSSCCCHHHHHHHHT
T ss_pred HHHHHHHcCCCEEEECCCC----CCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHhc
Confidence 9999999999999986432 22221 2466788898899998753 44456777776654
No 247
>4hpn_A Putative uncharacterized protein; enolase, enzyme function initiative, EFI, structural genomic isomerase; 1.60A {Agrobacterium tumefaciens} PDB: 4ggb_A
Probab=96.86 E-value=0.026 Score=52.30 Aligned_cols=131 Identities=11% Similarity=0.078 Sum_probs=93.3
Q ss_pred HHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEeccCCChHHHHHHHHHHHHcCCc
Q psy4398 121 KKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIRVFHNEADTIALCKRLEACGII 198 (306)
Q Consensus 121 ~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~~a~~l~~~G~d 198 (306)
+..++||..+-+..+. +++.-.+.++++|+.+ ++.+.+-...+|+.+++.++++.+++.++.
T Consensus 154 ~~~~~Gf~~~K~k~g~----------------~~~~di~~v~avr~~~g~~~~l~vDaN~~~~~~~A~~~~~~l~~~~i~ 217 (378)
T 4hpn_A 154 ERRAEGFHACKIKIGF----------------GVEEDLRVIAAVREAIGPDMRLMIDANHGYTVTEAITLGDRAAGFGID 217 (378)
T ss_dssp HHHHTTCSEEEEECCS----------------CHHHHHHHHHHHHHHHTTTSEEEEECTTCCCHHHHHHHHHHHGGGCCS
T ss_pred HHHHhccceecccccC----------------ChHHHHHHHHHHHHhcCCcEEEEEecCcccCHHHHHHHHhhhhhcccc
Confidence 3445699999887552 2444456788888887 455666666689999999999999999987
Q ss_pred EEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhhhhccccCCCCCch-------HHHHHHH
Q psy4398 199 AIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNCAFLRNHYPVEKLP-------KTILYAH 271 (306)
Q Consensus 199 ~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v~vGrall~~p~~~-------~~~l~~~ 271 (306)
+|- ++. .+.+++..+++++.+++||.+-=.+.+..++.++++.+. .-+-+|... -+.+.+.
T Consensus 218 ~iE-------eP~-~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a----~d~i~~d~~~~GGit~~~~ia~~ 285 (378)
T 4hpn_A 218 WFE-------EPV-VPEQLDAYARVRAGQPIPVAGGETWHGRYGMWQALSAGA----VDILQPDLCGCGGFSEIQKIATL 285 (378)
T ss_dssp CEE-------CCS-CTTCHHHHHHHHHHSSSCEEECTTCCHHHHHHHHHHTTC----CSEECCBTTTTTHHHHHHHHHHH
T ss_pred hhh-------cCC-CccchhhhHHHHhhCCceeeCCcCccchHhHHHHHHcCC----CCEEeeCCeeCCChhHHHHHHHH
Confidence 763 222 345889999999999999998888999999999887532 111122111 1256666
Q ss_pred HHhcCCCC
Q psy4398 272 CKYKRFEV 279 (306)
Q Consensus 272 ~~~~g~~~ 279 (306)
.+++|++.
T Consensus 286 A~~~gi~v 293 (378)
T 4hpn_A 286 ATLHGVRI 293 (378)
T ss_dssp HHHHTCEE
T ss_pred HHHcCCeE
Confidence 77888773
No 248
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=96.83 E-value=0.016 Score=52.24 Aligned_cols=123 Identities=14% Similarity=0.158 Sum_probs=81.6
Q ss_pred CCHHHHHHHHHHHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEeccCCChHHHHH
Q psy4398 111 ADPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIRVFHNEADTIA 187 (306)
Q Consensus 111 ~~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~ 187 (306)
-|.+.+.+..+.+. .|.|+|-++.+. |-...-..+.-.++++.+.+.+ .+||.+-+.. .+..++++
T Consensus 30 iD~~~l~~lv~~li~~Gv~gl~v~GtT----------GE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~-~~t~~ai~ 98 (301)
T 1xky_A 30 IDFAKTTKLVNYLIDNGTTAIVVGGTT----------GESPTLTSEEKVALYRHVVSVVDKRVPVIAGTGS-NNTHASID 98 (301)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSTT----------TTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCC-SCHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccc----------cChhhCCHHHHHHHHHHHHHHhCCCceEEeCCCC-CCHHHHHH
Confidence 45677777777554 599999986432 2222223344455566555544 4788888773 46788999
Q ss_pred HHHHHHHcCCcEEEEcccCCCCCCCCCC---cHHHHHHHHhhCCCcEEE-e----cCC-CCHHHHHHHHH
Q psy4398 188 LCKRLEACGIIAIGVHGRTKAERPRHRN---RIEMIRTLTQHLKIPVIA-N----GGS-KEIVDYGGVFS 248 (306)
Q Consensus 188 ~a~~l~~~G~d~i~v~~~~~~~~~~~p~---~~~~v~~i~~~~~ipvia-~----GGI-~s~~~~~~~l~ 248 (306)
+++.++++|+|++.+.... |..|. -+++.++|.+++++|||. | .|+ -+++.+.++.+
T Consensus 99 la~~A~~~Gadavlv~~P~----y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 164 (301)
T 1xky_A 99 LTKKATEVGVDAVMLVAPY----YNKPSQEGMYQHFKAIAESTPLPVMLYNVPGRSIVQISVDTVVRLSE 164 (301)
T ss_dssp HHHHHHHTTCSEEEEECCC----SSCCCHHHHHHHHHHHHHTCSSCEEEEECHHHHSSCCCHHHHHHHHT
T ss_pred HHHHHHhcCCCEEEEcCCC----CCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHHc
Confidence 9999999999999876432 32222 246678888888999776 3 243 46777776654
No 249
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=96.82 E-value=0.0096 Score=56.62 Aligned_cols=142 Identities=14% Similarity=0.096 Sum_probs=100.7
Q ss_pred CCceEEEecCCCHHHHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEeccCC
Q psy4398 101 KNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFH 180 (306)
Q Consensus 101 ~~p~ivql~g~~~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~ 180 (306)
+.|++-+=+..++-+ ..+....|+|+|=|++.+- +.+.+.++++..++ .+..+.|-+.
T Consensus 108 ~lPvLrKDFI~d~~Q---i~ea~~~GAD~ILLi~a~l---------------~~~~l~~l~~~a~~-lgm~~LvEvh--- 165 (452)
T 1pii_A 108 PQPILCKDFIIDPYQ---IYLARYYQADACLLMLSVL---------------DDDQYRQLAAVAHS-LEMGVLTEVS--- 165 (452)
T ss_dssp CSCEEEESCCCSHHH---HHHHHHTTCSEEEEETTTC---------------CHHHHHHHHHHHHH-TTCEEEEEEC---
T ss_pred CCCeEEEeccCCHHH---HHHHHHcCCCEEEEEcccC---------------CHHHHHHHHHHHHH-cCCeEEEEeC---
Confidence 456666655555533 3332345999999987641 23567888888776 5888888888
Q ss_pred ChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhC--CCcEEEecCCCCHHHHHHHHHh--hhhhccc
Q psy4398 181 NEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHL--KIPVIANGGSKEIVDYGGVFSL--NCAFLRN 256 (306)
Q Consensus 181 ~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~--~ipvia~GGI~s~~~~~~~l~~--~v~vGra 256 (306)
+ .+-++.+.+.|++.|-+..|..... ..+++...++.+.+ ++++|+-|||.+++|+..+.+. ++.+|.+
T Consensus 166 ~----~eE~~~A~~lga~iIGinnr~L~t~---~~dl~~~~~L~~~ip~~~~vIaEsGI~t~edv~~~~~~a~avLVGea 238 (452)
T 1pii_A 166 N----EEEQERAIALGAKVVGINNRDLRDL---SIDLNRTRELAPKLGHNVTVISESGINTYAQVRELSHFANGFLIGSA 238 (452)
T ss_dssp S----HHHHHHHHHTTCSEEEEESEETTTT---EECTHHHHHHHHHHCTTSEEEEESCCCCHHHHHHHTTTCSEEEECHH
T ss_pred C----HHHHHHHHHCCCCEEEEeCCCCCCC---CCCHHHHHHHHHhCCCCCeEEEECCCCCHHHHHHHHHhCCEEEEcHH
Confidence 2 3444556678999999998865332 24678888888877 6899999999999999999886 4489999
Q ss_pred cCCCCCchHHHHHHHH
Q psy4398 257 HYPVEKLPKTILYAHC 272 (306)
Q Consensus 257 ll~~p~~~~~~l~~~~ 272 (306)
+++.+. +...++++.
T Consensus 239 lmr~~d-~~~~~~~l~ 253 (452)
T 1pii_A 239 LMAHDD-LHAAVRRVL 253 (452)
T ss_dssp HHTCSC-HHHHHHHHH
T ss_pred HcCCcC-HHHHHHHHH
Confidence 987543 333445554
No 250
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=96.82 E-value=0.017 Score=51.90 Aligned_cols=123 Identities=14% Similarity=0.075 Sum_probs=80.6
Q ss_pred CCHHHHHHHHHHH-hcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEeccCCChHHHHH
Q psy4398 111 ADPERALEAAKKV-EHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIRVFHNEADTIA 187 (306)
Q Consensus 111 ~~~~~~~~aa~~~-~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~ 187 (306)
-|.+.+.+..+.+ +.|+|+|-++.+. |-...-..+.-.++++.+.+.+ .+||.+-+.. .+..++++
T Consensus 25 iD~~~l~~lv~~li~~Gv~gl~~~Gtt----------GE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~-~~t~~ai~ 93 (297)
T 3flu_A 25 IHYEQLRDLIDWHIENGTDGIVAVGTT----------GESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGA-NNTVEAIA 93 (297)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSTT----------TTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCC-SSHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCccc----------cCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCCC-cCHHHHHH
Confidence 4567777777765 4599999996443 1112223333455555555544 4788887663 56788999
Q ss_pred HHHHHHHcCCcEEEEcccCCCCCCCCCC---cHHHHHHHHhhCCCcEEEe------cCCCCHHHHHHHHH
Q psy4398 188 LCKRLEACGIIAIGVHGRTKAERPRHRN---RIEMIRTLTQHLKIPVIAN------GGSKEIVDYGGVFS 248 (306)
Q Consensus 188 ~a~~l~~~G~d~i~v~~~~~~~~~~~p~---~~~~v~~i~~~~~ipvia~------GGI~s~~~~~~~l~ 248 (306)
+++.+++.|+|++.+.... |..|. -.++.++|.+++++||+.= |---+++.+.++.+
T Consensus 94 la~~a~~~Gadavlv~~P~----y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 159 (297)
T 3flu_A 94 LSQAAEKAGADYTLSVVPY----YNKPSQEGIYQHFKTIAEATSIPMIIYNVPGRTVVSMTNDTILRLAE 159 (297)
T ss_dssp HHHHHHHTTCSEEEEECCC----SSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSSCCCHHHHHHHTT
T ss_pred HHHHHHHcCCCEEEECCCC----CCCCCHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCHHHHHHHHc
Confidence 9999999999999876432 22222 2567788899999998753 33346666666543
No 251
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=96.80 E-value=0.027 Score=51.46 Aligned_cols=123 Identities=14% Similarity=0.062 Sum_probs=82.6
Q ss_pred CCHHHHHHHHHHHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEeccCCChHHHHH
Q psy4398 111 ADPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIRVFHNEADTIA 187 (306)
Q Consensus 111 ~~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~ 187 (306)
-|.+.+.+..+.+. .|.|+|-++-+. |-...-..+.-.++++.+.+.+ .+||.+-+.. .+..++++
T Consensus 52 iD~~~l~~lv~~li~~Gv~Gl~v~GtT----------GE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~-~st~eai~ 120 (332)
T 2r8w_A 52 VDIEAFSALIARLDAAEVDSVGILGST----------GIYMYLTREERRRAIEAAATILRGRRTLMAGIGA-LRTDEAVA 120 (332)
T ss_dssp BCHHHHHHHHHHHHHHTCSEEEESSTT----------TTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECC-SSHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccc----------cChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCC-CCHHHHHH
Confidence 46677777777554 599999986432 2222223444455666665554 4789888773 46788999
Q ss_pred HHHHHHHcCCcEEEEcccCCCCCCCCCC---cHHHHHHHHhhCCCcEEE-e----cCC-CCHHHHHHHHH
Q psy4398 188 LCKRLEACGIIAIGVHGRTKAERPRHRN---RIEMIRTLTQHLKIPVIA-N----GGS-KEIVDYGGVFS 248 (306)
Q Consensus 188 ~a~~l~~~G~d~i~v~~~~~~~~~~~p~---~~~~v~~i~~~~~ipvia-~----GGI-~s~~~~~~~l~ 248 (306)
+++.++++|+|++.+.... |..|. -+++.++|.+++++|||. | .|+ -+++.+.++.+
T Consensus 121 la~~A~~~Gadavlv~~P~----Y~~~s~~~l~~~f~~VA~a~~lPiilYn~P~~tg~~l~~e~~~~La~ 186 (332)
T 2r8w_A 121 LAKDAEAAGADALLLAPVS----YTPLTQEEAYHHFAAVAGATALPLAIYNNPTTTRFTFSDELLVRLAY 186 (332)
T ss_dssp HHHHHHHHTCSEEEECCCC----SSCCCHHHHHHHHHHHHHHCSSCEEEECCHHHHCCCCCHHHHHHHHT
T ss_pred HHHHHHhcCCCEEEECCCC----CCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHHHc
Confidence 9999999999999886432 32222 256778889999999876 3 243 47777777654
No 252
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=96.78 E-value=0.019 Score=51.52 Aligned_cols=122 Identities=15% Similarity=0.043 Sum_probs=80.9
Q ss_pred CCHHHHHHHHHHHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEeccCCChHHHHH
Q psy4398 111 ADPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIRVFHNEADTIA 187 (306)
Q Consensus 111 ~~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~ 187 (306)
-|.+.+.+..+.+. .|.|+|-++.+. |-...-..+.-.++++.+.+.+ .+||.+-+.. .+..++++
T Consensus 18 iD~~~l~~lv~~li~~Gv~gl~~~Gtt----------GE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~-~~t~~ai~ 86 (294)
T 2ehh_A 18 VDYEALGNLIEFHVDNGTDAILVCGTT----------GESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTGG-NATHEAVH 86 (294)
T ss_dssp ECHHHHHHHHHHHHTTTCCEEEESSTT----------TTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCC-SCHHHHHH
T ss_pred cCHHHHHHHHHHHHHCCCCEEEECccc----------cChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCC-CCHHHHHH
Confidence 35677777777654 599999986332 1122223333455555555544 4788888763 46788999
Q ss_pred HHHHHHHcCCcEEEEcccCCCCCCCCCC---cHHHHHHHHhhCCCcEEE-e----cCC-CCHHHHHHHH
Q psy4398 188 LCKRLEACGIIAIGVHGRTKAERPRHRN---RIEMIRTLTQHLKIPVIA-N----GGS-KEIVDYGGVF 247 (306)
Q Consensus 188 ~a~~l~~~G~d~i~v~~~~~~~~~~~p~---~~~~v~~i~~~~~ipvia-~----GGI-~s~~~~~~~l 247 (306)
+++.+++.|+|++.+.... |..|. -.++.++|.+++++||+. | .|+ -+++.+.++.
T Consensus 87 la~~A~~~Gadavlv~~P~----y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La 151 (294)
T 2ehh_A 87 LTAHAKEVGADGALVVVPY----YNKPTQRGLYEHFKTVAQEVDIPIIIYNIPSRTCVEISVDTMFKLA 151 (294)
T ss_dssp HHHHHHHTTCSEEEEECCC----SSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred HHHHHHhcCCCEEEECCCC----CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCcCCCHHHHHHHH
Confidence 9999999999999876432 32222 245678888888999766 3 243 4788777776
No 253
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=96.77 E-value=0.017 Score=52.30 Aligned_cols=123 Identities=12% Similarity=0.079 Sum_probs=80.6
Q ss_pred CCHHHHHHHHHHH-hcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEeccCCChHHHHH
Q psy4398 111 ADPERALEAAKKV-EHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIRVFHNEADTIA 187 (306)
Q Consensus 111 ~~~~~~~~aa~~~-~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~ 187 (306)
-|.+.+.+..+.+ +.|+|+|-++.+. |-...-..+.-.++++.+.+.+ .+||.+-+.. .+..++++
T Consensus 41 iD~~~l~~lv~~li~~Gv~Gl~v~GtT----------GE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~-~st~eai~ 109 (314)
T 3qze_A 41 LDWDSLAKLVDFHLQEGTNAIVAVGTT----------GESATLDVEEHIQVIRRVVDQVKGRIPVIAGTGA-NSTREAVA 109 (314)
T ss_dssp BCHHHHHHHHHHHHHHTCCEEEESSGG----------GTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCC-SSHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccc----------cChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCC-cCHHHHHH
Confidence 4567777777765 4599999885332 2222223333345555555444 4788887663 46788999
Q ss_pred HHHHHHHcCCcEEEEcccCCCCCCCCCC---cHHHHHHHHhhCCCcEEEe------cCCCCHHHHHHHHH
Q psy4398 188 LCKRLEACGIIAIGVHGRTKAERPRHRN---RIEMIRTLTQHLKIPVIAN------GGSKEIVDYGGVFS 248 (306)
Q Consensus 188 ~a~~l~~~G~d~i~v~~~~~~~~~~~p~---~~~~v~~i~~~~~ipvia~------GGI~s~~~~~~~l~ 248 (306)
+++.+++.|+|++.+.... |..|. -.++.++|.+++++||+.= |---+++.+.++.+
T Consensus 110 la~~A~~~Gadavlv~~P~----y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 175 (314)
T 3qze_A 110 LTEAAKSGGADACLLVTPY----YNKPTQEGMYQHFRHIAEAVAIPQILYNVPGRTSCDMLPETVERLSK 175 (314)
T ss_dssp HHHHHHHTTCSEEEEECCC----SSCCCHHHHHHHHHHHHHHSCSCEEEEECHHHHSCCCCHHHHHHHHT
T ss_pred HHHHHHHcCCCEEEEcCCC----CCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHhc
Confidence 9999999999999876432 22221 2567788888899998763 33446777666554
No 254
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=96.77 E-value=0.004 Score=54.27 Aligned_cols=144 Identities=10% Similarity=0.034 Sum_probs=92.9
Q ss_pred eEEEecCCCHHHHHHHHHHHhc-CCCEEEEcc--C--CCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEecc
Q psy4398 104 IILQIGTADPERALEAAKKVEH-DVAAIDINM--G--CPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRV 178 (306)
Q Consensus 104 ~ivql~g~~~~~~~~aa~~~~~-g~d~veln~--g--cP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~ 178 (306)
+..+|...+...+.+..+.+.+ |+|.+.+.. | +|+- .+| .++++++|+.+.. .+++=.
T Consensus 16 i~psila~D~~~l~~~i~~~~~~gad~lhvDvmDG~fvpn~-----t~G----------~~~v~~lr~~~~~--DvhLMv 78 (237)
T 3cu2_A 16 LSVGILSANWLQLNEEVTTLLENQINVLHFDIADGQFSSLF-----TVG----------AIGIKYFPTHCFK--DVHLMV 78 (237)
T ss_dssp EEEEGGGSCGGGHHHHHHHHHHTTCCEEEEEEEBSSSSSCB-----CBC----------THHHHTSCTTSEE--EEEEEC
T ss_pred EEEeeeeCCcccHHHHHHHHHHcCCCEEEEEEecCccccch-----hhh----------HHHHHHHhhhCCC--CeEEEE
Confidence 7788888888888888887765 899865542 2 2431 122 2467777776543 666642
Q ss_pred CCChHHHHHHHHHHHHcCCcEEEEcccC-----------C-C---------CC---------------------------
Q psy4398 179 FHNEADTIALCKRLEACGIIAIGVHGRT-----------K-A---------ER--------------------------- 210 (306)
Q Consensus 179 g~~~~~~~~~a~~l~~~G~d~i~v~~~~-----------~-~---------~~--------------------------- 210 (306)
+ +...+++.+.++|+|.+++|.-. + . +.
T Consensus 79 --~--~p~~~i~~~~~aGAd~itvH~ea~~~~~~~i~~i~~~~~~~~~~~~g~~~gv~l~p~Tp~~~l~~~l~~~D~vlv 154 (237)
T 3cu2_A 79 --R--NQLEVAKAVVANGANLVTLQLEQYHDFALTIEWLAKQKTTYANQVYPVLIGACLCPETPISELEPYLDQIDVIQL 154 (237)
T ss_dssp --S--CHHHHHHHHHHTTCSEEEEETTCTTSHHHHHHHHTTCEEEETTEEEECEEEEEECTTSCGGGGTTTTTTCSEEEE
T ss_pred --E--CHHHHHHHHHHcCCCEEEEecCCcccHHHHHHHHHhcccccccccCCceEEEEEeCCChHHHHHHHhhcCceeee
Confidence 1 23567777888888888876421 0 1 10
Q ss_pred ------CCC----CCcHHHHHHHHhhC-----CCcEEEecCCCCHHHHHHHHH--hhh---hhccccCCCCCchHHHHHH
Q psy4398 211 ------PRH----RNRIEMIRTLTQHL-----KIPVIANGGSKEIVDYGGVFS--LNC---AFLRNHYPVEKLPKTILYA 270 (306)
Q Consensus 211 ------~~~----p~~~~~v~~i~~~~-----~ipvia~GGI~s~~~~~~~l~--~~v---~vGrall~~p~~~~~~l~~ 270 (306)
+.+ +..++-++++++.. ++||.+-|||+ .+++.++++ .|+ .+||+++.. .+...++.
T Consensus 155 Msv~pgfggq~f~~~~l~ki~~lr~~~~~~~~~~~I~vdGGI~-~~~~~~~~~~~aGad~~VvGSaIf~~--d~~~~~~~ 231 (237)
T 3cu2_A 155 LTLDPRNGTKYPSELILDRVIQVEKRLGNRRVEKLINIDGSMT-LELAKYFKQGTHQIDWLVSGSALFSG--ELKTNLKV 231 (237)
T ss_dssp ESEETTTTEECCHHHHHHHHHHHHHHHGGGGGGCEEEEESSCC-HHHHHHHHHSSSCCCCEEECGGGGSS--CHHHHHHH
T ss_pred eeeccCcCCeecChhHHHHHHHHHHHHHhcCCCceEEEECCcC-HHHHHHHHHhCCCCcEEEEeeHHhCC--CHHHHHHH
Confidence 000 11256667777776 58999999998 889999999 754 999999974 23434444
Q ss_pred H
Q psy4398 271 H 271 (306)
Q Consensus 271 ~ 271 (306)
|
T Consensus 232 l 232 (237)
T 3cu2_A 232 W 232 (237)
T ss_dssp H
T ss_pred H
Confidence 4
No 255
>4h83_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, enzyme function initiative; 2.09A {Marine actinobacterium PHSC20C1} PDB: 3no1_A 3msy_A
Probab=96.77 E-value=0.011 Score=55.22 Aligned_cols=148 Identities=10% Similarity=0.016 Sum_probs=101.9
Q ss_pred CCHHHHHHHHHHHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEeccCCChHHHHH
Q psy4398 111 ADPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIRVFHNEADTIA 187 (306)
Q Consensus 111 ~~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~ 187 (306)
.+++++++.++.+. .||..+-+..+.. +++.=.+.++++|+++ ++.+.+-...+|+.+++.+
T Consensus 163 ~~~~~~~~~~~~~~~~G~~~~Kikvg~~---------------~~~~d~~~v~avR~~~G~~~~l~vDaN~~~~~~~A~~ 227 (388)
T 4h83_A 163 EPLGSIADEMHNYQELGLAGVKFKVGGL---------------SAAEDAARITAAREAAGDDFIICIDANQGYKPAVAVD 227 (388)
T ss_dssp CTTCSHHHHHHHHHHHTBSEEEEECSSS---------------CHHHHHHHHHHHHHHHCSSSEEEEECTTCBCHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCceEeecCCCC---------------CHHHHHHHHHHHHHhcCCCeEEEEecCcCCCHHHHHH
Confidence 34567777766555 5999999976532 2333345678888877 3566666666899999999
Q ss_pred HHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhhhhccccCCCCCch---
Q psy4398 188 LCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNCAFLRNHYPVEKLP--- 264 (306)
Q Consensus 188 ~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v~vGrall~~p~~~--- 264 (306)
+++.+++.++.+|- ++.....+++..+++++.+++||.+-=.+.+..++.++++.+. .-+-+|...
T Consensus 228 ~~~~l~~~~~~~iE-------eP~~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a----~d~i~~d~~~~G 296 (388)
T 4h83_A 228 LSRRIADLNIRWFE-------EPVEWHNDKRSMRDVRYQGSVPVCAGQTEFSASGCRDLMETGA----IDVCNFDSSWSG 296 (388)
T ss_dssp HHHHTTTSCCCCEE-------SCBCSTTHHHHHHHHHHHSSSCEEECTTCSSHHHHHHHHHHTC----CSEECCCGGGTT
T ss_pred HHHHhhhcCcceee-------cCcccccchHHHHHHHhhcCCCccCCccccChHhHHHHHHcCC----CCeEeecceeCC
Confidence 99999999887763 2222223577889999999999998888999999999988632 111222221
Q ss_pred ----HHHHHHHHHhcCCCCCccee
Q psy4398 265 ----KTILYAHCKYKRFEVPKYET 284 (306)
Q Consensus 265 ----~~~l~~~~~~~g~~~~~~~~ 284 (306)
-+.+.+..+.+|+.+.++-+
T Consensus 297 Git~~~kia~~A~~~gv~v~~h~~ 320 (388)
T 4h83_A 297 GPTAWLRTAAIATSYDVQMGHHEE 320 (388)
T ss_dssp CHHHHHHHHHHHHHTTCEECCCSC
T ss_pred CHHHHHHHHHHHHHCCCEEEecCH
Confidence 12555667788877655543
No 256
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=96.76 E-value=0.0093 Score=54.12 Aligned_cols=122 Identities=12% Similarity=0.035 Sum_probs=80.9
Q ss_pred CCHHHHHHHHHHHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEeccCCChHHHHH
Q psy4398 111 ADPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIRVFHNEADTIA 187 (306)
Q Consensus 111 ~~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~ 187 (306)
-|.+.+.+..+.+. .|+|+|-++.+. |-...-..+.-.++++.+.+.+ .+||.+-+. .+..++++
T Consensus 30 iD~~~l~~lv~~li~~Gv~Gl~v~GtT----------GE~~~Ls~eEr~~v~~~~v~~~~grvpViaGvg--~~t~~ai~ 97 (316)
T 3e96_A 30 IDWHHYKETVDRIVDNGIDVIVPCGNT----------SEFYALSLEEAKEEVRRTVEYVHGRALVVAGIG--YATSTAIE 97 (316)
T ss_dssp BCHHHHHHHHHHHHTTTCCEECTTSGG----------GTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEEC--SSHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEeCccc----------cCcccCCHHHHHHHHHHHHHHhCCCCcEEEEeC--cCHHHHHH
Confidence 35677787777654 599999885332 2222223334455555555544 479999987 38899999
Q ss_pred HHHHHHHcCCcEEEEcccCCCCCCCCCC---cHHHHHHHHhhCCCcEEE-e-cCCCCHHHHHHHHH
Q psy4398 188 LCKRLEACGIIAIGVHGRTKAERPRHRN---RIEMIRTLTQHLKIPVIA-N-GGSKEIVDYGGVFS 248 (306)
Q Consensus 188 ~a~~l~~~G~d~i~v~~~~~~~~~~~p~---~~~~v~~i~~~~~ipvia-~-GGI~s~~~~~~~l~ 248 (306)
+++.+++.|+|++.+.... |..|. -+++.++|.+++++||+. | |---+++.+.++.+
T Consensus 98 la~~A~~~Gadavlv~~P~----y~~~s~~~l~~~f~~va~a~~lPiilYn~g~~l~~~~~~~La~ 159 (316)
T 3e96_A 98 LGNAAKAAGADAVMIHMPI----HPYVTAGGVYAYFRDIIEALDFPSLVYFKDPEISDRVLVDLAP 159 (316)
T ss_dssp HHHHHHHHTCSEEEECCCC----CSCCCHHHHHHHHHHHHHHHTSCEEEEECCTTSCTHHHHHHTT
T ss_pred HHHHHHhcCCCEEEEcCCC----CCCCCHHHHHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHc
Confidence 9999999999999986332 22221 256778899988999765 4 43346666665543
No 257
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=96.75 E-value=0.015 Score=52.65 Aligned_cols=121 Identities=14% Similarity=0.101 Sum_probs=80.2
Q ss_pred CCHHHHHHHHHHH-hcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEeccCCChHHHHH
Q psy4398 111 ADPERALEAAKKV-EHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIRVFHNEADTIA 187 (306)
Q Consensus 111 ~~~~~~~~aa~~~-~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~ 187 (306)
-|.+.+.+..+.+ +.|+|+|-++.+. |-...-..+.-.++++.+.+.+ .+||.+-+.. .+..++++
T Consensus 42 iD~~~l~~lv~~li~~Gv~Gi~v~GtT----------GE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~-~~t~~ai~ 110 (315)
T 3na8_A 42 LDLPALGRSIERLIDGGVHAIAPLGST----------GEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVSD-LTTAKTVR 110 (315)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEECSSGG----------GTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCC-SSHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccc----------cChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCC-CCHHHHHH
Confidence 4567777777765 4599999886332 2222223334455555555544 4788887663 56788999
Q ss_pred HHHHHHHcCCcEEEEcccCCCCCCCCCC---cHHHHHHHHhhCCCcEEEe------cCCCCHHHHHHH
Q psy4398 188 LCKRLEACGIIAIGVHGRTKAERPRHRN---RIEMIRTLTQHLKIPVIAN------GGSKEIVDYGGV 246 (306)
Q Consensus 188 ~a~~l~~~G~d~i~v~~~~~~~~~~~p~---~~~~v~~i~~~~~ipvia~------GGI~s~~~~~~~ 246 (306)
+++.+++.|+|++.+.... |..|. -+++.++|.+++++||+.= |---+++.+.++
T Consensus 111 la~~A~~~Gadavlv~~P~----y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~L 174 (315)
T 3na8_A 111 RAQFAESLGAEAVMVLPIS----YWKLNEAEVFQHYRAVGEAIGVPVMLYNNPGTSGIDMSVELILRI 174 (315)
T ss_dssp HHHHHHHTTCSEEEECCCC----SSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHH
T ss_pred HHHHHHhcCCCEEEECCCC----CCCCCHHHHHHHHHHHHHhCCCcEEEEeCcchhCcCCCHHHHHHH
Confidence 9999999999999986432 22221 3567788999999997653 333467777666
No 258
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=96.74 E-value=0.017 Score=51.61 Aligned_cols=122 Identities=12% Similarity=0.075 Sum_probs=81.3
Q ss_pred CCHHHHHHHHHHH-hcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEeccCCChHHHHH
Q psy4398 111 ADPERALEAAKKV-EHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIRVFHNEADTIA 187 (306)
Q Consensus 111 ~~~~~~~~aa~~~-~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~ 187 (306)
-|.+.+.+..+.+ +.|.|+|-++-+. |-...-..+.-.++++.+.+.+ .+||.+-+.. .+..++++
T Consensus 18 iD~~~l~~lv~~li~~Gv~gl~~~Gtt----------GE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~-~~t~~ai~ 86 (289)
T 2yxg_A 18 VDFDGLEENINFLIENGVSGIVAVGTT----------GESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAGS-NCTEEAIE 86 (289)
T ss_dssp ECHHHHHHHHHHHHHTTCSEEEESSTT----------TTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCC-SSHHHHHH
T ss_pred cCHHHHHHHHHHHHHCCCCEEEECccc----------cChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCC-CCHHHHHH
Confidence 3567777777755 4599999995432 2222223334455555555544 4788888763 46788999
Q ss_pred HHHHHHHcCCcEEEEcccCCCCCCCCCC---cHHHHHHHHhhCCCcEEE-e----cCC-CCHHHHHHHH
Q psy4398 188 LCKRLEACGIIAIGVHGRTKAERPRHRN---RIEMIRTLTQHLKIPVIA-N----GGS-KEIVDYGGVF 247 (306)
Q Consensus 188 ~a~~l~~~G~d~i~v~~~~~~~~~~~p~---~~~~v~~i~~~~~ipvia-~----GGI-~s~~~~~~~l 247 (306)
+++.+++.|+|++.+.... |..|. -+++.++|.+++++||+. | .|+ -+++.+.++.
T Consensus 87 la~~a~~~Gadavlv~~P~----y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La 151 (289)
T 2yxg_A 87 LSVFAEDVGADAVLSITPY----YNKPTQEGLRKHFGKVAESINLPIVLYNVPSRTAVNLEPKTVKLLA 151 (289)
T ss_dssp HHHHHHHHTCSEEEEECCC----SSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred HHHHHHhcCCCEEEECCCC----CCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHHH
Confidence 9999999999999876432 32232 245678888888999776 3 243 4788877776
No 259
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=96.74 E-value=0.018 Score=51.50 Aligned_cols=123 Identities=13% Similarity=0.100 Sum_probs=79.8
Q ss_pred CCHHHHHHHHHHH-hcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEeccCCChHHHHH
Q psy4398 111 ADPERALEAAKKV-EHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIRVFHNEADTIA 187 (306)
Q Consensus 111 ~~~~~~~~aa~~~-~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~ 187 (306)
-|.+.+.+..+.+ +.|+|+|-++.+. +-+..+ ..+.-.++++.+.+.+ .+||.+-+.. .+..++++
T Consensus 19 iD~~~l~~lv~~li~~Gv~gl~~~Gtt--------GE~~~L--s~~Er~~v~~~~~~~~~gr~pviaGvg~-~~t~~ai~ 87 (291)
T 3tak_A 19 VDWKSLEKLVEWHIEQGTNSIVAVGTT--------GEASTL--SMEEHTQVIKEIIRVANKRIPIIAGTGA-NSTREAIE 87 (291)
T ss_dssp BCHHHHHHHHHHHHHHTCCEEEESSTT--------TTGGGS--CHHHHHHHHHHHHHHHTTSSCEEEECCC-SSHHHHHH
T ss_pred cCHHHHHHHHHHHHHCCCCEEEECccc--------cccccC--CHHHHHHHHHHHHHHhCCCCeEEEeCCC-CCHHHHHH
Confidence 3567777777755 4599999885432 111222 3333355555555544 4788887663 46788999
Q ss_pred HHHHHHHcCCcEEEEcccCCCCCCCCCC---cHHHHHHHHhhCCCcEEEe------cCCCCHHHHHHHHH
Q psy4398 188 LCKRLEACGIIAIGVHGRTKAERPRHRN---RIEMIRTLTQHLKIPVIAN------GGSKEIVDYGGVFS 248 (306)
Q Consensus 188 ~a~~l~~~G~d~i~v~~~~~~~~~~~p~---~~~~v~~i~~~~~ipvia~------GGI~s~~~~~~~l~ 248 (306)
+++.+++.|+|++.+.... |..|. -.++.++|.+++++||+.= |---+++.+.++.+
T Consensus 88 la~~a~~~Gadavlv~~P~----y~~~~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 153 (291)
T 3tak_A 88 LTKAAKDLGADAALLVTPY----YNKPTQEGLYQHYKAIAEAVELPLILYNVPGRTGVDLSNDTAVRLAE 153 (291)
T ss_dssp HHHHHHHHTCSEEEEECCC----SSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHHHHTT
T ss_pred HHHHHHhcCCCEEEEcCCC----CCCCCHHHHHHHHHHHHHhcCCCEEEEecccccCCCCCHHHHHHHHc
Confidence 9999999999999876432 22221 2567788888889998753 33346666666543
No 260
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=96.74 E-value=0.017 Score=52.20 Aligned_cols=122 Identities=15% Similarity=0.122 Sum_probs=81.1
Q ss_pred CCHHHHHHHHHHH-hcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEeccCCChHHHHH
Q psy4398 111 ADPERALEAAKKV-EHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIRVFHNEADTIA 187 (306)
Q Consensus 111 ~~~~~~~~aa~~~-~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~ 187 (306)
-|.+.+.+..+.+ +.|+|+|-++-+. |-...-..+.-.++++.+.+.+ .+||.+-+.. .+..++++
T Consensus 30 iD~~~l~~lv~~li~~Gv~gl~v~GtT----------GE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~-~st~~ai~ 98 (306)
T 1o5k_A 30 LDLESYERLVRYQLENGVNALIVLGTT----------GESPTVNEDEREKLVSRTLEIVDGKIPVIVGAGT-NSTEKTLK 98 (306)
T ss_dssp ECHHHHHHHHHHHHHTTCCEEEESSGG----------GTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCC-SCHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCccc----------cchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCCC-ccHHHHHH
Confidence 3567777777755 4599999986332 2222223334455555555544 4788888763 46788999
Q ss_pred HHHHHHHcCCcEEEEcccCCCCCCCCCC---cHHHHHHHHhhCCCcEEE-e----cCC-CCHHHHHHHH
Q psy4398 188 LCKRLEACGIIAIGVHGRTKAERPRHRN---RIEMIRTLTQHLKIPVIA-N----GGS-KEIVDYGGVF 247 (306)
Q Consensus 188 ~a~~l~~~G~d~i~v~~~~~~~~~~~p~---~~~~v~~i~~~~~ipvia-~----GGI-~s~~~~~~~l 247 (306)
+++.++++|+|++.+.... |..|. -.++.++|.+++++||+. | .|+ -+++.+.++.
T Consensus 99 la~~A~~~Gadavlv~~P~----y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La 163 (306)
T 1o5k_A 99 LVKQAEKLGANGVLVVTPY----YNKPTQEGLYQHYKYISERTDLGIVVYNVPGRTGVNVLPETAARIA 163 (306)
T ss_dssp HHHHHHHHTCSEEEEECCC----SSCCCHHHHHHHHHHHHTTCSSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred HHHHHHhcCCCEEEECCCC----CCCCCHHHHHHHHHHHHHhCCCCEEEEeCccccCcCCCHHHHHHHH
Confidence 9999999999999876432 32222 245678888888999766 3 343 4777777776
No 261
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=96.74 E-value=0.014 Score=52.69 Aligned_cols=126 Identities=12% Similarity=0.086 Sum_probs=82.1
Q ss_pred CCHHHHHHHHHHH-hcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEeccCCChHHHHH
Q psy4398 111 ADPERALEAAKKV-EHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIRVFHNEADTIA 187 (306)
Q Consensus 111 ~~~~~~~~aa~~~-~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~ 187 (306)
-|.+.+.+..+.+ +.|.|+|=++-+. |-...-..+.-.++++.+.+.+ .+||.+-+.. .+..++++
T Consensus 26 iD~~~l~~lv~~li~~Gv~gl~v~GtT----------GE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~-~~t~~ai~ 94 (309)
T 3fkr_A 26 LDLASQKRAVDFMIDAGSDGLCILANF----------SEQFAITDDERDVLTRTILEHVAGRVPVIVTTSH-YSTQVCAA 94 (309)
T ss_dssp BCHHHHHHHHHHHHHTTCSCEEESSGG----------GTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCC-SSHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccc----------cCcccCCHHHHHHHHHHHHHHhCCCCcEEEecCC-chHHHHHH
Confidence 4667788777765 4599999985332 2222223344455566655544 4789888863 56788999
Q ss_pred HHHHHHHcCCcEEEEcccCCCCCCCCCC---cHHHHHHHHhhCCCcEEEe-----cCCCCHHHHHHHHH
Q psy4398 188 LCKRLEACGIIAIGVHGRTKAERPRHRN---RIEMIRTLTQHLKIPVIAN-----GGSKEIVDYGGVFS 248 (306)
Q Consensus 188 ~a~~l~~~G~d~i~v~~~~~~~~~~~p~---~~~~v~~i~~~~~ipvia~-----GGI~s~~~~~~~l~ 248 (306)
+++.+++.|+|++.+....-. ....|. -.++.+.|.+++++|||.= |---+++...++.+
T Consensus 95 la~~A~~~Gadavlv~~Pyy~-~~~~~s~~~l~~~f~~va~a~~lPiilYn~P~tg~~l~~~~~~~La~ 162 (309)
T 3fkr_A 95 RSLRAQQLGAAMVMAMPPYHG-ATFRVPEAQIFEFYARVSDAIAIPIMVQDAPASGTALSAPFLARMAR 162 (309)
T ss_dssp HHHHHHHTTCSEEEECCSCBT-TTBCCCHHHHHHHHHHHHHHCSSCEEEEECGGGCCCCCHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEcCCCCc-cCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCCCHHHHHHHHh
Confidence 999999999999988643110 001221 2567788999989887653 33346777777664
No 262
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=96.73 E-value=0.02 Score=51.74 Aligned_cols=127 Identities=12% Similarity=0.063 Sum_probs=82.2
Q ss_pred CCHHHHHHHHHHHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEeccCCChHHHHH
Q psy4398 111 ADPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIRVFHNEADTIA 187 (306)
Q Consensus 111 ~~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~ 187 (306)
-|.+.+.+..+.+. .|+|+|=++-+. |-...-..+.-.++++.+.+.+ .+||.+-+.. .+..++++
T Consensus 32 iD~~~l~~lv~~li~~Gv~Gl~v~GtT----------GE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~-~~t~~ai~ 100 (307)
T 3s5o_A 32 VDYGKLEENLHKLGTFPFRGFVVQGSN----------GEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSGC-ESTQATVE 100 (307)
T ss_dssp BCHHHHHHHHHHHTTSCCSEEEESSGG----------GTGGGSCHHHHHHHHHHHHHTSCTTSEEEEECCC-SSHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccc----------cchhhCCHHHHHHHHHHHHHHcCCCCcEEEecCC-CCHHHHHH
Confidence 35677777777654 599999886332 2222234445567777777766 4788887652 47788999
Q ss_pred HHHHHHHcCCcEEEEcccCCCC-CCCCCCcHHHHHHHHhhCCCcEEEec-----C-CCCHHHHHHHHH
Q psy4398 188 LCKRLEACGIIAIGVHGRTKAE-RPRHRNRIEMIRTLTQHLKIPVIANG-----G-SKEIVDYGGVFS 248 (306)
Q Consensus 188 ~a~~l~~~G~d~i~v~~~~~~~-~~~~p~~~~~v~~i~~~~~ipvia~G-----G-I~s~~~~~~~l~ 248 (306)
+++.+++.|+|++.+....-.. ......-+++.++|.+++++|||.=. | --+++.+.++.+
T Consensus 101 la~~A~~~Gadavlv~~P~y~~~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 168 (307)
T 3s5o_A 101 MTVSMAQVGADAAMVVTPCYYRGRMSSAALIHHYTKVADLSPIPVVLYSVPANTGLDLPVDAVVTLSQ 168 (307)
T ss_dssp HHHHHHHTTCSEEEEECCCTTGGGCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHT
T ss_pred HHHHHHHcCCCEEEEcCCCcCCCCCCHHHHHHHHHHHHhhcCCCEEEEeCCcccCCCCCHHHHHHHhc
Confidence 9999999999999885432110 01111135677888888899976532 3 236666666554
No 263
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=96.73 E-value=0.035 Score=50.03 Aligned_cols=123 Identities=11% Similarity=0.117 Sum_probs=80.5
Q ss_pred CCHHHHHHHHHHHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEeccCCChHHHHH
Q psy4398 111 ADPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIRVFHNEADTIA 187 (306)
Q Consensus 111 ~~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~ 187 (306)
-|.+.+.+..+.+. .|.|+|=++.+. |-...-..+.-.++++.+.+.+ .+||.+-+.. .+..++++
T Consensus 34 iD~~~l~~lv~~li~~Gv~gl~v~Gtt----------GE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~-~st~~ai~ 102 (304)
T 3cpr_A 34 IDIAAGREVAAYLVDKGLDSLVLAGTT----------GESPTTTAAEKLELLKAVREEVGDRAKLIAGVGT-NNTRTSVE 102 (304)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSTT----------TTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECCC-SCHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccc----------cChhhCCHHHHHHHHHHHHHHhCCCCcEEecCCC-CCHHHHHH
Confidence 45677777777554 599999986432 1122223333355555555544 4788888763 46788999
Q ss_pred HHHHHHHcCCcEEEEcccCCCCCCCCCC---cHHHHHHHHhhCCCcEEE-e----cCC-CCHHHHHHHHH
Q psy4398 188 LCKRLEACGIIAIGVHGRTKAERPRHRN---RIEMIRTLTQHLKIPVIA-N----GGS-KEIVDYGGVFS 248 (306)
Q Consensus 188 ~a~~l~~~G~d~i~v~~~~~~~~~~~p~---~~~~v~~i~~~~~ipvia-~----GGI-~s~~~~~~~l~ 248 (306)
+++.+++.|+|++.+... .|..|. -.++.++|.+++++||+. | .|+ -+++.+.++.+
T Consensus 103 la~~A~~~Gadavlv~~P----~y~~~~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 168 (304)
T 3cpr_A 103 LAEAAASAGADGLLVVTP----YYSKPSQEGLLAHFGAIAAATEVPICLYDIPGRSGIPIESDTMRRLSE 168 (304)
T ss_dssp HHHHHHHTTCSEEEEECC----CSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSSCCCHHHHHHHTT
T ss_pred HHHHHHhcCCCEEEECCC----CCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHHHc
Confidence 999999999999987643 232232 245678888888999766 3 243 46777766643
No 264
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=96.73 E-value=0.0077 Score=57.94 Aligned_cols=95 Identities=15% Similarity=0.048 Sum_probs=64.2
Q ss_pred HHHHHHHHHHhcccccEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcccCCCC--------CCCCC--CcHHHHHHHHh
Q psy4398 156 IACNILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAE--------RPRHR--NRIEMIRTLTQ 225 (306)
Q Consensus 156 ~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~--------~~~~p--~~~~~v~~i~~ 225 (306)
...+.++.+++.+++|+.+|-- .+.+ -++.+. |+|.|.+ +..... ....| ..+..+.++.+
T Consensus 255 ~~L~~I~~l~~~~~vpvi~k~v--~~~~----~a~~l~--G~d~v~v-g~g~g~~~~~r~~~~~g~~~~~~l~~~~~~~~ 325 (486)
T 2cu0_A 255 KAIKSMKEMRQKVDADFIVGNI--ANPK----AVDDLT--FADAVKV-GIGPGSICTTRIVAGVGVPQITAVAMVADRAQ 325 (486)
T ss_dssp HHHHHHHHHHHTCCSEEEEEEE--CCHH----HHTTCT--TSSEEEE-CSSCSTTBCHHHHTCCCCCHHHHHHHHHHHHH
T ss_pred ehhhHHHHHHHHhCCccccCCc--CCHH----HHHHhh--CCCeEEE-eeeeccceeeeEEeecCcchHHHHHHHHHHHH
Confidence 3455677788888899988755 2322 334444 9999998 321110 01111 12445566666
Q ss_pred hCCCcEEEecCCCCHHHHHHHHHhhh---hhccccCC
Q psy4398 226 HLKIPVIANGGSKEIVDYGGVFSLNC---AFLRNHYP 259 (306)
Q Consensus 226 ~~~ipvia~GGI~s~~~~~~~l~~~v---~vGrall~ 259 (306)
.+++|||+.|||.+..|+.+++..|+ ++|++++.
T Consensus 326 ~~~vpVia~GGi~~~~di~kalalGA~~v~~g~~~~~ 362 (486)
T 2cu0_A 326 EYGLYVIADGGIRYSGDIVKAIAAGADAVMLGNLLAG 362 (486)
T ss_dssp HHTCEEEEESCCCSHHHHHHHHHTTCSEEEESTTTTT
T ss_pred HcCCcEEecCCCCCHHHHHHHHHcCCCceeeChhhhc
Confidence 67899999999999999999998754 99999874
No 265
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=96.73 E-value=0.013 Score=53.10 Aligned_cols=122 Identities=16% Similarity=0.076 Sum_probs=81.3
Q ss_pred CCHHHHHHHHHHH-hcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEeccCCChHHHHH
Q psy4398 111 ADPERALEAAKKV-EHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIRVFHNEADTIA 187 (306)
Q Consensus 111 ~~~~~~~~aa~~~-~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~ 187 (306)
-|.+.+.+..+.+ +.|.|+|-++-+. |-...-..+.-.++++.+.+.+ .+||.+-+.. +..++++
T Consensus 30 iD~~~l~~lv~~li~~Gv~gl~v~GtT----------GE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~--st~~ai~ 97 (314)
T 3d0c_A 30 IDWKGLDDNVEFLLQNGIEVIVPNGNT----------GEFYALTIEEAKQVATRVTELVNGRATVVAGIGY--SVDTAIE 97 (314)
T ss_dssp BCHHHHHHHHHHHHHTTCSEECTTSGG----------GTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECS--SHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECccc----------CChhhCCHHHHHHHHHHHHHHhCCCCeEEecCCc--CHHHHHH
Confidence 4567777777755 4599998875321 2222223344455566655544 4799998874 7788999
Q ss_pred HHHHHHHcCCcEEEEcccCCCCCCCCCC---cHHHHHHHHhhCCCcEEE-e-cCCCCHHHHHHHHH
Q psy4398 188 LCKRLEACGIIAIGVHGRTKAERPRHRN---RIEMIRTLTQHLKIPVIA-N-GGSKEIVDYGGVFS 248 (306)
Q Consensus 188 ~a~~l~~~G~d~i~v~~~~~~~~~~~p~---~~~~v~~i~~~~~ipvia-~-GGI~s~~~~~~~l~ 248 (306)
+++.+++.|+|++.+.... |..|. -.++.++|.+++++|||. | .|+-+++.+.++.+
T Consensus 98 la~~A~~~Gadavlv~~P~----y~~~s~~~l~~~f~~va~a~~lPiilYn~tg~l~~~~~~~La~ 159 (314)
T 3d0c_A 98 LGKSAIDSGADCVMIHQPV----HPYITDAGAVEYYRNIIEALDAPSIIYFKDAHLSDDVIKELAP 159 (314)
T ss_dssp HHHHHHHTTCSEEEECCCC----CSCCCHHHHHHHHHHHHHHSSSCEEEEECCTTSCTHHHHHHTT
T ss_pred HHHHHHHcCCCEEEECCCC----CCCCCHHHHHHHHHHHHHhCCCCEEEEeCCCCcCHHHHHHHHc
Confidence 9999999999999886432 32232 256678899999999876 2 23256777766643
No 266
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=96.72 E-value=0.084 Score=46.86 Aligned_cols=160 Identities=17% Similarity=0.202 Sum_probs=89.5
Q ss_pred CCCCHHHHHHHHHcCCCEEEecceechhhhhhhhhhhcccccccccCCCCCceeeecCCCCCCc-eEEEec-C---CCHH
Q psy4398 40 RMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDGSVVFRTCPREKNK-IILQIG-T---ADPE 114 (306)
Q Consensus 40 ~~t~~~~r~~~~~~G~g~~~te~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p-~ivql~-g---~~~~ 114 (306)
+.-|.....++.+.|+..+.+....... ..+.+.. ..++-.+.+.- -+.+.+. ...| +++-+. | .+++
T Consensus 40 tayDa~sA~l~e~aG~d~ilvGdSl~~~-~lG~~dt-~~vTldemi~h--~~aV~r~---~~~~~vvaD~pfgsy~~s~~ 112 (281)
T 1oy0_A 40 TAYDYSTARIFDEAGIPVLLVGDSAANV-VYGYDTT-VPISIDELIPL--VRGVVRG---APHALVVADLPFGSYEAGPT 112 (281)
T ss_dssp ECCSHHHHHHHHTTTCCEEEECTTHHHH-TTCCSSS-SSCCGGGTHHH--HHHHHHH---CTTSEEEEECCTTSSTTCHH
T ss_pred eCcCHHHHHHHHHcCCCEEEECHHHHHH-HcCCCCC-CCCCHHHHHHH--HHHHHhc---CCCCeEEEECCCCcccCCHH
Confidence 3467888888888999988775321110 0110000 00000000000 0011111 2234 444443 2 2677
Q ss_pred HHHH-HHHHHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEecc--------------
Q psy4398 115 RALE-AAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRV-------------- 178 (306)
Q Consensus 115 ~~~~-aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~-------------- 178 (306)
+..+ +.+.++ .|+++|.|--+ +...+.|+++.++ ++||.--+.+
T Consensus 113 ~a~~na~rl~~eaGa~aVklEdg-------------------~e~~~~I~al~~a-gIpV~gHiGLtPqsv~~~ggf~v~ 172 (281)
T 1oy0_A 113 AALAAATRFLKDGGAHAVKLEGG-------------------ERVAEQIACLTAA-GIPVMAHIGFTPQSVNTLGGFRVQ 172 (281)
T ss_dssp HHHHHHHHHHHTTCCSEEEEEBS-------------------GGGHHHHHHHHHH-TCCEEEEEECCC------------
T ss_pred HHHHHHHHHHHHhCCeEEEECCc-------------------HHHHHHHHHHHHC-CCCEEeeecCCcceecccCCeEEE
Confidence 6555 555666 49999999521 1234445555443 6787632222
Q ss_pred CCC--hHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecC
Q psy4398 179 FHN--EADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGG 236 (306)
Q Consensus 179 g~~--~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GG 236 (306)
|-+ .+++++=|++++++||+.|.+.+. | -+.+++|.+.+++|+|+.|.
T Consensus 173 grt~~a~~~i~rA~a~~eAGA~~ivlE~v--------p--~~~a~~it~~l~iP~igIGa 222 (281)
T 1oy0_A 173 GRGDAAEQTIADAIAVAEAGAFAVVMEMV--------P--AELATQITGKLTIPTVGIGA 222 (281)
T ss_dssp --CHHHHHHHHHHHHHHHHTCSEEEEESC--------C--HHHHHHHHHHCSSCEEEESS
T ss_pred eCcHHHHHHHHHHHHHHHcCCcEEEEecC--------C--HHHHHHHHHhCCCCEEEeCC
Confidence 112 245788889999999999999763 2 26789999999999999875
No 267
>3u9i_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, PSI-biology; 2.90A {Roseiflexus SP}
Probab=96.71 E-value=0.019 Score=53.68 Aligned_cols=158 Identities=14% Similarity=0.081 Sum_probs=100.7
Q ss_pred ceEEEecCCCHHHHHHHHHHH-hcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhccc-ccEEEEeccCC
Q psy4398 103 KIILQIGTADPERALEAAKKV-EHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLS-IPVSCKIRVFH 180 (306)
Q Consensus 103 p~ivql~g~~~~~~~~aa~~~-~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~-~pv~vKir~g~ 180 (306)
|+...+...+++++.+.++.. ++||..+-+.+|.+.... .....++.-.+.++++|+.++ ..+.+-...+|
T Consensus 156 ~~~~t~~~~~~e~~~~~a~~~~~~Gf~~iKlKvg~~~~~~-------~~~~~~~~di~~v~avR~a~~d~~L~vDaN~~w 228 (393)
T 3u9i_A 156 ETDVTITTGSVTAAARAAQAIVARGVTTIKIKIGAGDPDA-------TTIRTMEHDLARIVAIRDVAPTARLILDGNCGY 228 (393)
T ss_dssp ECCEEEC---CHHHHHHHHHHHTTTCCEEEEECC--------------CHHHHHHHHHHHHHHHHHSTTSEEEEECCSCC
T ss_pred EEEEEecCCCHHHHHHHHHHHHHcCCCeEEEEeCCCcccc-------cccccHHHHHHHHHHHHHHCCCCeEEEEccCCC
Confidence 334455566788888777755 469999999887543210 001124455667888888773 34555555579
Q ss_pred ChHHHHHHHHHH--HHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhh-hhcccc
Q psy4398 181 NEADTIALCKRL--EACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNC-AFLRNH 257 (306)
Q Consensus 181 ~~~~~~~~a~~l--~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v-~vGral 257 (306)
+.+++.++++.+ ++.++.+|- ++. .+.+++..+++++.+++||.+-=.+.+..++.++++.+. .+ +
T Consensus 229 ~~~~A~~~~~~L~~~~~~i~~iE-------eP~-~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~---i 297 (393)
T 3u9i_A 229 TAPDALRLLDMLGVHGIVPALFE-------QPV-AKDDEEGLRRLTATRRVPVAADESVASATDAARLARNAAVDV---L 297 (393)
T ss_dssp CHHHHHHHHHTTTTTTCCCSEEE-------CCS-CTTCTTHHHHHHHTCSSCEEESTTCCSHHHHHHHHHTTCCSE---E
T ss_pred CHHHHHHHHHHHhhCCCCeEEEE-------CCC-CCCcHHHHHHHHhhCCCcEEeCCcCCCHHHHHHHHHcCCCCE---E
Confidence 999999999999 777777763 222 245778889999999999998878999999999887532 00 0
Q ss_pred CCCC----CchHHHHHHHHHhcCCC
Q psy4398 258 YPVE----KLPKTILYAHCKYKRFE 278 (306)
Q Consensus 258 l~~p----~~~~~~l~~~~~~~g~~ 278 (306)
--++ ...-+.+.+..+++|++
T Consensus 298 ~~k~~~GGit~~~~ia~~A~~~gi~ 322 (393)
T 3u9i_A 298 NIKLMKCGIVEALDIAAIARTAGLH 322 (393)
T ss_dssp EECHHHHCHHHHHHHHHHHHHHTCE
T ss_pred EecccccCHHHHHHHHHHHHHcCCe
Confidence 0011 11222566777778877
No 268
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=96.70 E-value=0.065 Score=47.17 Aligned_cols=161 Identities=19% Similarity=0.271 Sum_probs=92.2
Q ss_pred CCCCHHHHHHHHHcCCCEEEecceechhhhhhhhhhhcccccccccCCCCCceeeecCCCCCCceEEEecCC---CHHHH
Q psy4398 40 RMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDGSVVFRTCPREKNKIILQIGTA---DPERA 116 (306)
Q Consensus 40 ~~t~~~~r~~~~~~G~g~~~te~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~ivql~g~---~~~~~ 116 (306)
+.-|.....++.+.|+..+.+...... ...+.+.. ..++-.+.+. .-+.+.+.. ...++++-+... ++++.
T Consensus 23 tayD~~sA~l~e~aG~d~ilvGdsl~~-~~lG~~dt-~~vtldemi~--h~~aV~r~~--~~~~vvaD~pfgsy~~~~~a 96 (264)
T 1m3u_A 23 TAYDYSFAKLFADEGLNVMLVGDSLGM-TVQGHDST-LPVTVADIAY--HTAAVRRGA--PNCLLLADLPFMAYATPEQA 96 (264)
T ss_dssp ECCSHHHHHHHHHHTCCEEEECTTHHH-HTTCCSSS-TTCCHHHHHH--HHHHHHHHC--TTSEEEEECCTTSSSSHHHH
T ss_pred eCcCHHHHHHHHHcCCCEEEECHHHHH-HHcCCCCC-CCcCHHHHHH--HHHHHHhhC--CCCcEEEECCCCCcCCHHHH
Confidence 345888888888999999888532111 01111000 0000000000 000111111 123456555322 67777
Q ss_pred HHHHHHH-hcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEecc--------------CCC
Q psy4398 117 LEAAKKV-EHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRV--------------FHN 181 (306)
Q Consensus 117 ~~aa~~~-~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~--------------g~~ 181 (306)
.+.+.++ +.|+++|.|--+ +...+.|+++.++ ++||.--+.+ |-+
T Consensus 97 ~~~a~rl~kaGa~aVklEgg-------------------~e~~~~I~al~~a-gipV~gHiGLtPq~v~~~ggf~v~grt 156 (264)
T 1m3u_A 97 FENAATVMRAGANMVKIEGG-------------------EWLVETVQMLTER-AVPVCGHLGLTPQSVNIFGGYKVQGRG 156 (264)
T ss_dssp HHHHHHHHHTTCSEEECCCS-------------------GGGHHHHHHHHHT-TCCEEEEEESCGGGHHHHTSSCCCCCS
T ss_pred HHHHHHHHHcCCCEEEECCc-------------------HHHHHHHHHHHHC-CCCeEeeecCCceeecccCCeEEEeCC
Confidence 6666655 569999999411 1234455555543 7888733332 122
Q ss_pred h---HHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecC
Q psy4398 182 E---ADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGG 236 (306)
Q Consensus 182 ~---~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GG 236 (306)
. +++++=|++++++||+.|.+.+. | -+.+++|.+.+++|+|+.|.
T Consensus 157 ~~~a~~~i~rA~a~~eAGA~~ivlE~v--------p--~~~a~~it~~l~iP~igIGa 204 (264)
T 1m3u_A 157 DEAGDQLLSDALALEAAGAQLLVLECV--------P--VELAKRITEALAIPVIGIGA 204 (264)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEEESC--------C--HHHHHHHHHHCSSCEEEESS
T ss_pred HHHHHHHHHHHHHHHHCCCcEEEEecC--------C--HHHHHHHHHhCCCCEEEeCC
Confidence 2 45778889999999999999763 2 26789999999999999875
No 269
>2pge_A MENC; OSBS, NYSGXRC, PSI-II, structural genomics, protein structure initiative; 1.60A {Desulfotalea psychrophila LSV54}
Probab=96.70 E-value=0.02 Score=53.05 Aligned_cols=125 Identities=10% Similarity=0.122 Sum_probs=90.7
Q ss_pred CceEEEecCCCHHHHHHHHHHH-hcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhccc---ccEEEEec
Q psy4398 102 NKIILQIGTADPERALEAAKKV-EHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLS---IPVSCKIR 177 (306)
Q Consensus 102 ~p~ivql~g~~~~~~~~aa~~~-~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~---~pv~vKir 177 (306)
.|+-..+++.+++++.+.++.+ ++||..+-+.+|. .+++.-.+.++++++.++ +.+.+-..
T Consensus 152 vp~~~~i~~~~~e~~~~~a~~~~~~G~~~~K~Kvg~---------------~~~~~d~~~v~avr~~~g~~~~~l~vDaN 216 (377)
T 2pge_A 152 IPVNGLIWMGEAAFMQEQIEAKLAEGYGCLKLKIGA---------------IDFDKECALLAGIRESFSPQQLEIRVDAN 216 (377)
T ss_dssp EEBCEEECCCCHHHHHHHHHHHHHTTCSEEEEEC------------------CHHHHHHHHHHHHHHSCTTTCEEEEECT
T ss_pred EEEeEEecCCCHHHHHHHHHHHHHHhhhhheeecCC---------------CChHHHHHHHHHHHHHcCCCCceEEEECC
Confidence 4555566677888887766655 4699999997553 245666778888888775 45556655
Q ss_pred cCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHH--HHHHHHh
Q psy4398 178 VFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVD--YGGVFSL 249 (306)
Q Consensus 178 ~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~--~~~~l~~ 249 (306)
.+|+.+++.++++.+++.++.+|- ++. .+.+++-.+++++.+++||.+-=.+.+..+ ++++++.
T Consensus 217 ~~~~~~~a~~~~~~l~~~~i~~iE-------qP~-~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~i~~ 282 (377)
T 2pge_A 217 GAFSPANAPQRLKRLSQFHLHSIE-------QPI-RQHQWSEMAALCANSPLAIALDEELIGLGAEQRSAMLDA 282 (377)
T ss_dssp TBBCTTTHHHHHHHHHTTCCSEEE-------CCB-CSSCHHHHHHHHHHCSSCEEESGGGTTCCTHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHhcCCCcEEE-------ccC-CcccHHHHHHHHhhCCCcEEECCccCCcchHHHHHHHHh
Confidence 578889999999999999887773 222 345889999999999999988777777666 5566654
No 270
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=96.70 E-value=0.024 Score=50.81 Aligned_cols=122 Identities=10% Similarity=0.056 Sum_probs=84.8
Q ss_pred CCHHHHHHHHHHH-hcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEeccCCChHHHHH
Q psy4398 111 ADPERALEAAKKV-EHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIRVFHNEADTIA 187 (306)
Q Consensus 111 ~~~~~~~~aa~~~-~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~ 187 (306)
-|.+.+.+..+.+ +.|+|+|-++.+. |-...-..+.-.++++.+.+.+ .+||.+-+.. .+..++++
T Consensus 21 iD~~~l~~lv~~li~~Gv~gl~~~Gtt----------GE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~-~~t~~ai~ 89 (294)
T 3b4u_A 21 VDIDAMIAHARRCLSNGCDSVTLFGTT----------GEGCSVGSRERQAILSSFIAAGIAPSRIVTGVLV-DSIEDAAD 89 (294)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEEESSTT----------TTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEECC-SSHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccc----------cChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCC-ccHHHHHH
Confidence 4567777777755 4599999986432 2222234455567777777766 4789988873 46788999
Q ss_pred HHHHHHHcCCcEEEEcccCCCCCCCC-CC---cHHHHHHHHhhC---CCcEEE-e----cCC-CCHHHHHHHH
Q psy4398 188 LCKRLEACGIIAIGVHGRTKAERPRH-RN---RIEMIRTLTQHL---KIPVIA-N----GGS-KEIVDYGGVF 247 (306)
Q Consensus 188 ~a~~l~~~G~d~i~v~~~~~~~~~~~-p~---~~~~v~~i~~~~---~ipvia-~----GGI-~s~~~~~~~l 247 (306)
+++.+++.|+|++.+.... |.. |. -+++.++|.+++ ++||+. | .|+ -+++.+.++.
T Consensus 90 la~~A~~~Gadavlv~~P~----y~~~~s~~~l~~~f~~va~a~p~~~lPiilYn~P~~tg~~l~~~~~~~La 158 (294)
T 3b4u_A 90 QSAEALNAGARNILLAPPS----YFKNVSDDGLFAWFSAVFSKIGKDARDILVYNIPSVTMVTLSVELVGRLK 158 (294)
T ss_dssp HHHHHHHTTCSEEEECCCC----SSCSCCHHHHHHHHHHHHHHHCTTCCCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred HHHHHHhcCCCEEEEcCCc----CCCCCCHHHHHHHHHHHHHhcCCCCCcEEEEECcchhCcCCCHHHHHHHH
Confidence 9999999999999886432 222 22 256778899998 899776 3 243 4778777776
No 271
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=96.69 E-value=0.019 Score=52.14 Aligned_cols=123 Identities=13% Similarity=0.132 Sum_probs=81.6
Q ss_pred CCHHHHHHHHHHH-hcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEeccCCChHHHHH
Q psy4398 111 ADPERALEAAKKV-EHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIRVFHNEADTIA 187 (306)
Q Consensus 111 ~~~~~~~~aa~~~-~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~ 187 (306)
-|.+.+.+..+.+ +.|+|+|-++-+. |-...-..+.-.++++.+.+.+ .+||.+-+.. .+..++++
T Consensus 40 iD~~~l~~li~~li~~Gv~Gl~v~GtT----------GE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~-~st~~ai~ 108 (315)
T 3si9_A 40 IDEKAFCNFVEWQITQGINGVSPVGTT----------GESPTLTHEEHKRIIELCVEQVAKRVPVVAGAGS-NSTSEAVE 108 (315)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEECSSTT----------TTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCC-SSHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCccc----------cCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCC-CCHHHHHH
Confidence 4667788877765 4599999885332 1122223333345555555544 4789887763 46788999
Q ss_pred HHHHHHHcCCcEEEEcccCCCCCCCCCC---cHHHHHHHHhhCCCcEEEe------cCCCCHHHHHHHHH
Q psy4398 188 LCKRLEACGIIAIGVHGRTKAERPRHRN---RIEMIRTLTQHLKIPVIAN------GGSKEIVDYGGVFS 248 (306)
Q Consensus 188 ~a~~l~~~G~d~i~v~~~~~~~~~~~p~---~~~~v~~i~~~~~ipvia~------GGI~s~~~~~~~l~ 248 (306)
+++.+++.|+|++.+.... |..|. -+++.+.|.+++++||+.= |---+++.+.++.+
T Consensus 109 la~~A~~~Gadavlv~~P~----y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 174 (315)
T 3si9_A 109 LAKHAEKAGADAVLVVTPY----YNRPNQRGLYTHFSSIAKAISIPIIIYNIPSRSVIDMAVETMRDLCR 174 (315)
T ss_dssp HHHHHHHTTCSEEEEECCC----SSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHH
T ss_pred HHHHHHhcCCCEEEECCCC----CCCCCHHHHHHHHHHHHHcCCCCEEEEeCchhhCCCCCHHHHHHHHh
Confidence 9999999999999876432 22222 2567788888899997753 33446777777665
No 272
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=96.69 E-value=0.016 Score=53.20 Aligned_cols=122 Identities=16% Similarity=0.108 Sum_probs=81.2
Q ss_pred CCHHHHHHHHHHH-hcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEeccCCChHHHHH
Q psy4398 111 ADPERALEAAKKV-EHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIRVFHNEADTIA 187 (306)
Q Consensus 111 ~~~~~~~~aa~~~-~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~ 187 (306)
-|.+.+.+..+.+ +.|+|+|-++-+. |-...-..+.-.++++.+.+.+ .+||.+-+.. .+..++++
T Consensus 49 ID~~~l~~lv~~li~~Gv~Gl~v~GtT----------GE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~-~st~eai~ 117 (343)
T 2v9d_A 49 LDKPGTAALIDDLIKAGVDGLFFLGSG----------GEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGG-TNARETIE 117 (343)
T ss_dssp BCHHHHHHHHHHHHHTTCSCEEESSTT----------TTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCS-SCHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCccc----------cChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCC-CCHHHHHH
Confidence 4667777777755 4599999986432 2222223344455566655544 4788888763 46788999
Q ss_pred HHHHHHHcCCcEEEEcccCCCCCCCCCC---cHHHHHHHHhhCCCcEEE-e----cCC-CCHHHHHHHH
Q psy4398 188 LCKRLEACGIIAIGVHGRTKAERPRHRN---RIEMIRTLTQHLKIPVIA-N----GGS-KEIVDYGGVF 247 (306)
Q Consensus 188 ~a~~l~~~G~d~i~v~~~~~~~~~~~p~---~~~~v~~i~~~~~ipvia-~----GGI-~s~~~~~~~l 247 (306)
+++.+++.|+|++.+.... |..|. -+++.++|.+++++|||. | .|+ -+++.+.++.
T Consensus 118 la~~A~~~Gadavlv~~P~----Y~~~s~~~l~~~f~~VA~a~~lPiilYn~P~~tg~~l~~e~~~~La 182 (343)
T 2v9d_A 118 LSQHAQQAGADGIVVINPY----YWKVSEANLIRYFEQVADSVTLPVMLYNFPALTGQDLTPALVKTLA 182 (343)
T ss_dssp HHHHHHHHTCSEEEEECCS----SSCCCHHHHHHHHHHHHHTCSSCEEEEECHHHHSSCCCHHHHHHHH
T ss_pred HHHHHHhcCCCEEEECCCC----CCCCCHHHHHHHHHHHHHhcCCCEEEEeCchhcCcCCCHHHHHHHH
Confidence 9999999999999876432 22222 245678888888999776 3 243 4777777766
No 273
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=96.69 E-value=0.0065 Score=52.47 Aligned_cols=62 Identities=11% Similarity=0.063 Sum_probs=46.7
Q ss_pred HHHHHHcCCcEEEEcccCCCCCCCCCC-cHHHHHHHHhhC-CCcEEEecCCCCHHHHHHHHH-hhh---hhccccCC
Q psy4398 189 CKRLEACGIIAIGVHGRTKAERPRHRN-RIEMIRTLTQHL-KIPVIANGGSKEIVDYGGVFS-LNC---AFLRNHYP 259 (306)
Q Consensus 189 a~~l~~~G~d~i~v~~~~~~~~~~~p~-~~~~v~~i~~~~-~ipvia~GGI~s~~~~~~~l~-~~v---~vGrall~ 259 (306)
+..+.+.|+|+|-++.. .+. ..++++.++..+ ++|+++.|||+ ++++.+.++ .++ . |++++.
T Consensus 132 ~~~A~~~Gad~vk~FPa-------~~~~G~~~lk~i~~~~~~ipvvaiGGI~-~~N~~~~l~~~Ga~~v~-gSai~~ 199 (225)
T 1mxs_A 132 IMMGYALGYRRFKLFPA-------EISGGVAAIKAFGGPFGDIRFCPTGGVN-PANVRNYMALPNVMCVG-TTWMLD 199 (225)
T ss_dssp HHHHHTTTCCEEEETTH-------HHHTHHHHHHHHHTTTTTCEEEEBSSCC-TTTHHHHHHSTTBCCEE-ECTTSC
T ss_pred HHHHHHCCCCEEEEccC-------ccccCHHHHHHHHhhCCCCeEEEECCCC-HHHHHHHHhccCCEEEE-EchhcC
Confidence 34556788888888531 111 368899999999 89999999995 788888888 444 6 888885
No 274
>4h1z_A Enolase Q92ZS5; dehydratase, magnesium binding site, enzyme function initiat isomerase; 2.01A {Sinorhizobium meliloti} PDB: 2ppg_A
Probab=96.68 E-value=0.02 Score=53.86 Aligned_cols=117 Identities=12% Similarity=0.191 Sum_probs=86.5
Q ss_pred CCCHHHHHHHHHHHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhccc--ccEEEEeccCCChHHHH
Q psy4398 110 TADPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLS--IPVSCKIRVFHNEADTI 186 (306)
Q Consensus 110 g~~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~--~pv~vKir~g~~~~~~~ 186 (306)
..++++.++.++... +||..+-+..+... +...+.++++|+.++ +.+.+-...+|+.+++.
T Consensus 186 ~~~~~~~~~~a~~~~~~G~~~~K~k~g~~~----------------~~~~~~v~~vR~~~g~~~~l~vDaN~~~~~~~A~ 249 (412)
T 4h1z_A 186 EDTRAKRAELAAAWQAKGFSSFKFASPVAD----------------DGVAKEMEILRERLGPAVRIACDMHWAHTASEAV 249 (412)
T ss_dssp CSSHHHHHHHHHHHHHTTCCEEEEEGGGCT----------------TCHHHHHHHHHHHHCSSSEEEEECCSCCCHHHHH
T ss_pred CCcHHHHHHHHHHHHhcCcceeccccccch----------------hhHHHHHHHHHhccCCeEEEEeccccCCCHHHHH
Confidence 346778887777654 59999998644211 112344677777763 45556555579999999
Q ss_pred HHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhh
Q psy4398 187 ALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLN 250 (306)
Q Consensus 187 ~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~ 250 (306)
++++.+++.|+.++- ++ ..+.+++..+++++.+++||.+.=.+.+..++.++++.+
T Consensus 250 ~~~~~l~~~~l~~iE-------qP-~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~ 305 (412)
T 4h1z_A 250 ALIKAMEPHGLWFAE-------AP-VRTEDIDGLARVAASVSTAIAVGEEWRTVHDMVPRVARR 305 (412)
T ss_dssp HHHHHHGGGCEEEEE-------CC-SCTTCHHHHHHHHHHCSSEEEECTTCCSHHHHHHHHHTT
T ss_pred HHHHhhcccccceec-------CC-CCccchHHHHHHHhhcCCccccCCcccchHhHHHHHHcC
Confidence 999999999987663 22 234588999999999999999888899999999988753
No 275
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=96.68 E-value=0.017 Score=51.95 Aligned_cols=123 Identities=11% Similarity=0.095 Sum_probs=81.7
Q ss_pred CCHHHHHHHHHHH-hcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEeccCCChHHHHH
Q psy4398 111 ADPERALEAAKKV-EHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIRVFHNEADTIA 187 (306)
Q Consensus 111 ~~~~~~~~aa~~~-~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~ 187 (306)
-|.+.+.+..+.+ +.|.|+|-++-+. |-...-..+.-.++++.+.+.+ .+||.+-+.. .+..++++
T Consensus 18 iD~~~l~~lv~~li~~Gv~gi~v~Gtt----------GE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~-~~t~~ai~ 86 (297)
T 2rfg_A 18 VDEKALAGLVDWQIKHGAHGLVPVGTT----------GESPTLTEEEHKRVVALVAEQAQGRVPVIAGAGS-NNPVEAVR 86 (297)
T ss_dssp ECHHHHHHHHHHHHHTTCSEEECSSGG----------GTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCC-SSHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccc----------cchhhCCHHHHHHHHHHHHHHhCCCCeEEEccCC-CCHHHHHH
Confidence 4667777777755 4599999885331 2222223344455555555544 4788888773 46788999
Q ss_pred HHHHHHHcCCcEEEEcccCCCCCCCCCC---cHHHHHHHHhhCCCcEEE-e-----cCCCCHHHHHHHHH
Q psy4398 188 LCKRLEACGIIAIGVHGRTKAERPRHRN---RIEMIRTLTQHLKIPVIA-N-----GGSKEIVDYGGVFS 248 (306)
Q Consensus 188 ~a~~l~~~G~d~i~v~~~~~~~~~~~p~---~~~~v~~i~~~~~ipvia-~-----GGI~s~~~~~~~l~ 248 (306)
+++.+++.|+|++.+.... |..|. -.++.++|.+++++|||. | |---+++.+.++.+
T Consensus 87 la~~A~~~Gadavlv~~P~----y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 152 (297)
T 2rfg_A 87 YAQHAQQAGADAVLCVAGY----YNRPSQEGLYQHFKMVHDAIDIPIIVYNIPPRAVVDIKPETMARLAA 152 (297)
T ss_dssp HHHHHHHHTCSEEEECCCT----TTCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHT
T ss_pred HHHHHHhcCCCEEEEcCCC----CCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHHc
Confidence 9999999999999886432 32232 245678889999999766 3 33347777777654
No 276
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=96.68 E-value=0.068 Score=47.42 Aligned_cols=130 Identities=16% Similarity=0.127 Sum_probs=87.1
Q ss_pred CCceEEEec---CCCHHHHHHHHHHHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc---cccEE
Q psy4398 101 KNKIILQIG---TADPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL---SIPVS 173 (306)
Q Consensus 101 ~~p~ivql~---g~~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~---~~pv~ 173 (306)
+.|+++-+- |.++++..+.++++. .|+++|.|.=+..+ -|..+ -..+...+-|++++++. ++|+.
T Consensus 76 ~~pviaD~d~Gyg~~~~~~~~~v~~l~~aGaagv~iED~~~~-------~~k~l-~~~~e~~~~I~aa~~a~~~~g~~~~ 147 (275)
T 2ze3_A 76 AIPVNADIEAGYGHAPEDVRRTVEHFAALGVAGVNLEDATGL-------TPTEL-YDLDSQLRRIEAARAAIDASGVPVF 147 (275)
T ss_dssp SSCEEEECTTCSSSSHHHHHHHHHHHHHTTCSEEEEECBCSS-------SSSCB-CCHHHHHHHHHHHHHHHHHHTSCCE
T ss_pred CCCEEeecCCCCCCCHHHHHHHHHHHHHcCCcEEEECCCcCC-------CCCcc-CCHHHHHHHHHHHHHhHhhcCCCeE
Confidence 368888873 457888888887665 59999999754321 01222 34555556666665552 67766
Q ss_pred EEeccCC-----------ChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecC--CCCH
Q psy4398 174 CKIRVFH-----------NEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGG--SKEI 240 (306)
Q Consensus 174 vKir~g~-----------~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GG--I~s~ 240 (306)
+--|..- ..+++++=++.++++|+|.|.+.+. .+.+.++++.+.+++|+-.+.+ ..+.
T Consensus 148 i~aRtda~~~~~g~~~~~~~~~ai~Ra~ay~eAGAd~i~~e~~---------~~~~~~~~i~~~~~~P~n~~~~~~~~~~ 218 (275)
T 2ze3_A 148 LNARTDTFLKGHGATDEERLAETVRRGQAYADAGADGIFVPLA---------LQSQDIRALADALRVPLNVMAFPGSPVP 218 (275)
T ss_dssp EEEECCTTTTTCSSSHHHHHHHHHHHHHHHHHTTCSEEECTTC---------CCHHHHHHHHHHCSSCEEEECCTTSCCH
T ss_pred EEEechhhhccccccchhhHHHHHHHHHHHHHCCCCEEEECCC---------CCHHHHHHHHHhcCCCEEEecCCCCCCH
Confidence 6655421 2466888889999999999998763 3568999999999999877643 3444
Q ss_pred HHHHHHHHhh
Q psy4398 241 VDYGGVFSLN 250 (306)
Q Consensus 241 ~~~~~~l~~~ 250 (306)
+++-+.|
T Consensus 219 ---~eL~~lG 225 (275)
T 2ze3_A 219 ---RALLDAG 225 (275)
T ss_dssp ---HHHHHTT
T ss_pred ---HHHHHcC
Confidence 4444444
No 277
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=96.64 E-value=0.0084 Score=54.16 Aligned_cols=122 Identities=12% Similarity=0.027 Sum_probs=73.3
Q ss_pred hcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEecc-CC------Ch-HHHHHHHHHHHHc
Q psy4398 124 EHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRV-FH------NE-ADTIALCKRLEAC 195 (306)
Q Consensus 124 ~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~-g~------~~-~~~~~~a~~l~~~ 195 (306)
+.|+|+|.+.+-... +.- . .+..+.+.+++++.+ ..++|+.+-+-. |. ++ +...+.++.+.+.
T Consensus 119 ~~GAdaV~vlv~~~~-----d~~--~-~~~~~~i~~v~~~~~-~~G~p~lv~~~~~g~~v~~~~~~~~~v~~aa~~a~~l 189 (304)
T 1to3_A 119 RDGAKALKLLVLWRS-----DED--A-QQRLNMVKEFNELCH-SNGLLSIIEPVVRPPRCGDKFDREQAIIDAAKELGDS 189 (304)
T ss_dssp HTTCCEEEEEEEECT-----TSC--H-HHHHHHHHHHHHHHH-TTTCEEEEEEEECCCSSCSCCCHHHHHHHHHHHHTTS
T ss_pred HcCCCEEEEEEEcCC-----Ccc--H-HHHHHHHHHHHHHHH-HcCCcEEEEEECCCCccccCCChhHHHHHHHHHHHHc
Confidence 459999986432100 000 0 112233344444433 348887776532 11 22 4456668999999
Q ss_pred CCcEEEEcccCCCCCCCCCCcHHHHHHHHhh----CCCc-EEEecCCCCHH----HHHHHHHh---hhhhccccCCC
Q psy4398 196 GIIAIGVHGRTKAERPRHRNRIEMIRTLTQH----LKIP-VIANGGSKEIV----DYGGVFSL---NCAFLRNHYPV 260 (306)
Q Consensus 196 G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~----~~ip-via~GGI~s~~----~~~~~l~~---~v~vGrall~~ 260 (306)
|+|++-++...- + ...++.+.++.+. +++| |+..||+ +.+ .++++++. |+.+||+++..
T Consensus 190 GaD~iKv~~~~~-~----~g~~~~~~~vv~~~~~~~~~P~Vv~aGG~-~~~~~~~~~~~a~~aGa~Gv~vGRaI~q~ 260 (304)
T 1to3_A 190 GADLYKVEMPLY-G----KGARSDLLTASQRLNGHINMPWVILSSGV-DEKLFPRAVRVAMEAGASGFLAGRAVWSS 260 (304)
T ss_dssp SCSEEEECCGGG-G----CSCHHHHHHHHHHHHHTCCSCEEECCTTS-CTTTHHHHHHHHHHTTCCEEEESHHHHGG
T ss_pred CCCEEEeCCCcC-C----CCCHHHHHHHHHhccccCCCCeEEEecCC-CHHHHHHHHHHHHHcCCeEEEEehHHhCc
Confidence 999998875321 0 0155666666666 8999 9999999 443 35666655 55999999865
No 278
>3s5s_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium; 2.40A {Sorangium cellulosum}
Probab=96.64 E-value=0.019 Score=53.63 Aligned_cols=124 Identities=15% Similarity=0.155 Sum_probs=87.5
Q ss_pred ceEEEecCCCHHHHHHHHHHH-hcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhccc-ccEEEEeccCC
Q psy4398 103 KIILQIGTADPERALEAAKKV-EHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLS-IPVSCKIRVFH 180 (306)
Q Consensus 103 p~ivql~g~~~~~~~~aa~~~-~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~-~pv~vKir~g~ 180 (306)
|+...+...+++++.+.++.+ ++||..+-+.+|.. +++.-.+.++++|+.++ ..+.+-...+|
T Consensus 135 ~~~~t~~~~~~e~~~~~a~~~~~~G~~~iKlKvg~~---------------~~~~d~~~v~avR~~~~~~~L~vDaN~~w 199 (389)
T 3s5s_A 135 TTDITITTGSPERAEEAARRAAAMGFRALKVKVGGR---------------LAASDPARIEAIHAAAPGASLILDGNGGL 199 (389)
T ss_dssp ECCEEECSSCSHHHHHHHHHHHHHTCCEEEEECCGG---------------GTTTHHHHHHHHHHHCTTCEEEEECTTCS
T ss_pred EEEeeecCCCHHHHHHHHHHHHHcCCCeEEEEecCC---------------ChHHHHHHHHHHHHhCCCCeEEEECCCCC
Confidence 344556667888888777755 46999999986632 12223446777777763 34445544579
Q ss_pred ChHHHHHHHHHH--HHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHh
Q psy4398 181 NEADTIALCKRL--EACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSL 249 (306)
Q Consensus 181 ~~~~~~~~a~~l--~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~ 249 (306)
+.+++.++++.+ ++.++.+| +++. .+.+++..+++++.+++||.+-=.+.+..++.++++.
T Consensus 200 ~~~~A~~~~~~L~~~~~~i~~i-------EeP~-~~~d~~~~~~l~~~~~iPIa~dEs~~~~~~~~~~i~~ 262 (389)
T 3s5s_A 200 TAGEALALVAHARRLGADVALL-------EQPV-PRDDWDGMKEVTRRAGVDVAADESAASAEDVLRVAAE 262 (389)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEE-------ECCS-CTTCHHHHHHHHHHSSSCEEESTTCSSHHHHHHHHHT
T ss_pred CHHHHHHHHHHHhhCCCCeEEE-------ECCC-CcccHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHc
Confidence 999999999999 44444443 2222 2457899999999999999988789999999998875
No 279
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=96.63 E-value=0.021 Score=51.22 Aligned_cols=122 Identities=19% Similarity=0.148 Sum_probs=79.7
Q ss_pred CHHHHHHHHHHH-hcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEeccCCChHHHHHH
Q psy4398 112 DPERALEAAKKV-EHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIRVFHNEADTIAL 188 (306)
Q Consensus 112 ~~~~~~~aa~~~-~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~~ 188 (306)
|.+.+.+..+.+ +.|+|+|=++.+. |-...-..+.-.++++.+.+.+ .+||.+-+.. .+..+++++
T Consensus 21 D~~~l~~lv~~li~~Gv~gl~v~Gtt----------GE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~-~~t~~ai~l 89 (292)
T 3daq_A 21 NLEALKAHVNFLLENNAQAIIVNGTT----------AESPTLTTDEKELILKTVIDLVDKRVPVIAGTGT-NDTEKSIQA 89 (292)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSGG----------GTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCC-SCHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccc----------cccccCCHHHHHHHHHHHHHHhCCCCcEEEeCCc-ccHHHHHHH
Confidence 556777777755 4599999886432 2222222333345555555444 4789887753 567889999
Q ss_pred HHHHHHcCCcEEEEcccCCCCCCCCCC---cHHHHHHHHhhCCCcEEEe------cCCCCHHHHHHHHH
Q psy4398 189 CKRLEACGIIAIGVHGRTKAERPRHRN---RIEMIRTLTQHLKIPVIAN------GGSKEIVDYGGVFS 248 (306)
Q Consensus 189 a~~l~~~G~d~i~v~~~~~~~~~~~p~---~~~~v~~i~~~~~ipvia~------GGI~s~~~~~~~l~ 248 (306)
++.+++.|+|++.+.... |..|. -.++.++|.+++++||+.= |---+++.+.++.+
T Consensus 90 a~~a~~~Gadavlv~~P~----y~~~~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 154 (292)
T 3daq_A 90 SIQAKALGADAIMLITPY----YNKTNQRGLVKHFEAIADAVKLPVVLYNVPSRTNMTIEPETVEILSQ 154 (292)
T ss_dssp HHHHHHHTCSEEEEECCC----SSCCCHHHHHHHHHHHHHHHCSCEEEEECHHHHSCCCCHHHHHHHHT
T ss_pred HHHHHHcCCCEEEECCCC----CCCCCHHHHHHHHHHHHHhCCCCEEEEecccccCCCCCHHHHHHHhc
Confidence 999999999999886432 22221 2567788888889998753 33446777766654
No 280
>1wuf_A Hypothetical protein LIN2664; structural genomics, unknown function, nysgxrc target T2186, superfamily, protein structure initiative, PSI; 2.90A {Listeria innocua} SCOP: c.1.11.2 d.54.1.1
Probab=96.62 E-value=0.017 Score=53.86 Aligned_cols=121 Identities=14% Similarity=0.218 Sum_probs=87.9
Q ss_pred ceEEEec-CCCHHHHHHHHHHH-hcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc-cccEEEEeccC
Q psy4398 103 KIILQIG-TADPERALEAAKKV-EHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL-SIPVSCKIRVF 179 (306)
Q Consensus 103 p~ivql~-g~~~~~~~~aa~~~-~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~g 179 (306)
|+-..++ +.+++++.+.++.+ ++||..+-+.++ |. .+ .+.++++|+.+ ++.+.+-...+
T Consensus 151 ~~~~~~g~~~~~e~~~~~a~~~~~~G~~~~KiKvg-~~-------------~d----~~~v~avr~a~~~~~l~vDaN~~ 212 (393)
T 1wuf_A 151 KVGVSIGLQQNVETLLQLVNQYVDQGYERVKLKIA-PN-------------KD----IQFVEAVRKSFPKLSLMADANSA 212 (393)
T ss_dssp EBCEEECCCSCHHHHHHHHHHHHHHTCCEEEEECB-TT-------------BS----HHHHHHHHTTCTTSEEEEECTTC
T ss_pred eeeEEeCCCCCHHHHHHHHHHHHHHhhHhheeccC-hH-------------HH----HHHHHHHHHHcCCCEEEEECCCC
Confidence 3434444 34688887776655 459999999754 11 12 35578888876 34455555557
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhh
Q psy4398 180 HNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLN 250 (306)
Q Consensus 180 ~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~ 250 (306)
|+.+++ ++++.+++.++.+|- ++. .+.+++..+++++.+++||.+--.+.+..+++++++.+
T Consensus 213 ~~~~~a-~~~~~l~~~~i~~iE-------qP~-~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~ 274 (393)
T 1wuf_A 213 YNREDF-LLLKELDQYDLEMIE-------QPF-GTKDFVDHAWLQKQLKTRICLDENIRSVKDVEQAHSIG 274 (393)
T ss_dssp CCGGGH-HHHHTTGGGTCSEEE-------CCS-CSSCSHHHHHHHTTCSSEEEECTTCCSHHHHHHHHHHT
T ss_pred CCHHHH-HHHHHHHhCCCeEEE-------CCC-CCcCHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHhC
Confidence 888888 999999999998875 222 34578889999999999999988899999999988753
No 281
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=96.61 E-value=0.11 Score=46.03 Aligned_cols=161 Identities=16% Similarity=0.207 Sum_probs=94.5
Q ss_pred CCCCHHHHHHHHHcCCCEEEecceechhhhhhhhhhhcccccccccCCCCCceeeecCCCCCCceEEEec-C--CCHHHH
Q psy4398 40 RMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDGSVVFRTCPREKNKIILQIG-T--ADPERA 116 (306)
Q Consensus 40 ~~t~~~~r~~~~~~G~g~~~te~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~ivql~-g--~~~~~~ 116 (306)
+.-|.....++.+.|+..+.+....... ..+.+.. ..++-.+.+. +-+.+.+.. ...|+++-+- | .++++.
T Consensus 35 tayDa~sA~l~e~aG~d~ilvGdSl~~~-~lG~~dt-~~vtldem~~--h~~aV~r~~--~~~~vvaD~pfgsY~s~~~a 108 (275)
T 3vav_A 35 TCYDASFAALLDRANVDVQLIGDSLGNV-LQGQTTT-LPVTLDDIAY--HTACVARAQ--PRALIVADLPFGTYGTPADA 108 (275)
T ss_dssp ECCSHHHHHHHHHTTCSEEEECTTHHHH-TTCCSSS-TTCCHHHHHH--HHHHHHHTC--CSSEEEEECCTTSCSSHHHH
T ss_pred eCcCHHHHHHHHHcCCCEEEECcHHHHH-HcCCCCC-CccCHHHHHH--HHHHHHhcC--CCCCEEEecCCCCCCCHHHH
Confidence 3467888888889999988776321110 0000000 0000000000 000111111 1357888773 2 477777
Q ss_pred HHHHHHH-hcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEecc--------------CCC
Q psy4398 117 LEAAKKV-EHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRV--------------FHN 181 (306)
Q Consensus 117 ~~aa~~~-~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~--------------g~~ 181 (306)
.+.+.++ ++|+++|.|--+ ....+.++++.+ .++|+.--+.. |-+
T Consensus 109 ~~~a~rl~kaGa~aVklEdg-------------------~~~~~~i~~l~~-~GIpv~gHlgltPq~~~~~gg~~vqgrt 168 (275)
T 3vav_A 109 FASAVKLMRAGAQMVKFEGG-------------------EWLAETVRFLVE-RAVPVCAHVGLTPQSVHAFGGFKVQGKT 168 (275)
T ss_dssp HHHHHHHHHTTCSEEEEECC-------------------GGGHHHHHHHHH-TTCCEEEEEESCGGGHHHHC---CCCCS
T ss_pred HHHHHHHHHcCCCEEEECCc-------------------hhHHHHHHHHHH-CCCCEEEecCCCceEEeccCCeEEEcCC
Confidence 6666554 569999999411 123556666665 37787744332 122
Q ss_pred ---hHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecC
Q psy4398 182 ---EADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGG 236 (306)
Q Consensus 182 ---~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GG 236 (306)
.+++++=|++++++||+.|.+-+. | . +.+++|.+.+++|+|+-|.
T Consensus 169 ~~~a~~~i~rA~a~~eAGA~~ivlE~v--------p-~-~~a~~It~~l~iP~igIGa 216 (275)
T 3vav_A 169 EAGAAQLLRDARAVEEAGAQLIVLEAV--------P-T-LVAAEVTRELSIPTIGIGA 216 (275)
T ss_dssp HHHHHHHHHHHHHHHHHTCSEEEEESC--------C-H-HHHHHHHHHCSSCEEEESS
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEecCC--------C-H-HHHHHHHHhCCCCEEEEcc
Confidence 245778889999999999998754 2 3 4789999999999998875
No 282
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=96.61 E-value=0.023 Score=51.59 Aligned_cols=123 Identities=11% Similarity=0.077 Sum_probs=80.5
Q ss_pred CHHHHHHHHHHHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEeccCCChHHHHHH
Q psy4398 112 DPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIRVFHNEADTIAL 188 (306)
Q Consensus 112 ~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~~ 188 (306)
|.+.+.+..+.+. .|.|+|=++.+. |-...-..+.-.++++.+.+.+ .+||.+-+.. .+..+++++
T Consensus 30 D~~~l~~lv~~li~~Gv~gl~v~GtT----------GE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~-~~t~~ai~l 98 (318)
T 3qfe_A 30 DLASQERYYAYLARSGLTGLVILGTN----------AEAFLLTREERAQLIATARKAVGPDFPIMAGVGA-HSTRQVLEH 98 (318)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEESSGG----------GTGGGSCHHHHHHHHHHHHHHHCTTSCEEEECCC-SSHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccc----------cChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCC-CCHHHHHHH
Confidence 5577777777654 599999986332 2222223344455666665554 4789887763 577889999
Q ss_pred HHHHHHcCCcEEEEcccCCCCCCCCCC----cHHHHHHHHhhCCCcEEEe------cCC-CCHHHHHHHHH
Q psy4398 189 CKRLEACGIIAIGVHGRTKAERPRHRN----RIEMIRTLTQHLKIPVIAN------GGS-KEIVDYGGVFS 248 (306)
Q Consensus 189 a~~l~~~G~d~i~v~~~~~~~~~~~p~----~~~~v~~i~~~~~ipvia~------GGI-~s~~~~~~~l~ 248 (306)
++.+++.|+|++.+....- +..|. -.++.+.|.+++++||+.= .|+ -+++.+.++.+
T Consensus 99 a~~a~~~Gadavlv~~P~y---~~kp~~~~~l~~~f~~ia~a~~lPiilYn~P~~t~g~~l~~~~~~~La~ 166 (318)
T 3qfe_A 99 INDASVAGANYVLVLPPAY---FGKATTPPVIKSFFDDVSCQSPLPVVIYNFPGVCNGIDLDSDMITTIAR 166 (318)
T ss_dssp HHHHHHHTCSEEEECCCCC------CCCHHHHHHHHHHHHHHCSSCEEEEECCC----CCCCHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEeCCcc---cCCCCCHHHHHHHHHHHHhhCCCCEEEEeCCcccCCCCCCHHHHHHHHh
Confidence 9999999999999854321 11222 2567788999999997652 244 46777777765
No 283
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=96.61 E-value=0.017 Score=53.75 Aligned_cols=178 Identities=14% Similarity=0.111 Sum_probs=106.1
Q ss_pred ccccccccccC--CceEEccCCCCCCHH----HHHHHHHcCCCEEEecceechhhhhhhhhhhcccccccccCCCC--Cc
Q psy4398 20 ANANQANINYS--NKIILAPMVRMNTLP----FRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLD--GS 91 (306)
Q Consensus 20 ~~~~~~~l~l~--n~i~lAPm~~~t~~~----~r~~~~~~G~g~~~te~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~ 91 (306)
..++++++.+- +|++++..+++.+.. +...+++.|+.++.-....+..... .|...+. .+
T Consensus 129 t~i~i~~~~iG~~~~~~Iigpcsves~e~a~~~a~~~k~aGa~~vk~q~fkprts~~------------~f~gl~~egl~ 196 (385)
T 3nvt_A 129 TIVTVKGLPIGNGEPVFVFGPCSVESYEQVAAVAESIKAKGLKLIRGGAFKPRTSPY------------DFQGLGLEGLK 196 (385)
T ss_dssp CCEEETTEEETSSSCEEEEECSBCCCHHHHHHHHHHHHHTTCCEEECBSSCCCSSTT------------SCCCCTHHHHH
T ss_pred cEEEECCEEECCCCeEEEEEeCCcCCHHHHHHHHHHHHHcCCCeEEcccccCCCChH------------hhcCCCHHHHH
Confidence 45667776653 466777767777754 2233567898877666543221110 0100000 12
Q ss_pred eeeecCCCCCCceEEEecCCCHHHHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhccccc
Q psy4398 92 VVFRTCPREKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIP 171 (306)
Q Consensus 92 ~~~~~~~~~~~p~ivql~g~~~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~p 171 (306)
.+.+.+.+.|.|++..++.... . ..+.+.+|.+.| |+..+++..+ ++++. ..+.|
T Consensus 197 ~L~~~~~~~Gl~~~te~~d~~~--~----~~l~~~vd~lkI--------------gs~~~~n~~L----L~~~a-~~gkP 251 (385)
T 3nvt_A 197 ILKRVSDEYGLGVISEIVTPAD--I----EVALDYVDVIQI--------------GARNMQNFEL----LKAAG-RVDKP 251 (385)
T ss_dssp HHHHHHHHHTCEEEEECCSGGG--H----HHHTTTCSEEEE--------------CGGGTTCHHH----HHHHH-TSSSC
T ss_pred HHHHHHHHcCCEEEEecCCHHH--H----HHHHhhCCEEEE--------------CcccccCHHH----HHHHH-ccCCc
Confidence 2333444456777766643322 1 122223677777 3444556544 44443 46999
Q ss_pred EEEEeccCCChHHHHHHHHHHHHcCCcEEE-EcccCCC-CC-CCCCCcHHHHHHHHhhCCCcEEEe
Q psy4398 172 VSCKIRVFHNEADTIALCKRLEACGIIAIG-VHGRTKA-ER-PRHRNRIEMIRTLTQHLKIPVIAN 234 (306)
Q Consensus 172 v~vKir~g~~~~~~~~~a~~l~~~G~d~i~-v~~~~~~-~~-~~~p~~~~~v~~i~~~~~ipvia~ 234 (306)
|.+|-....+.+++...++.+.+.|..-|+ ++..+.. +. .....++..+..+++.+++||+.-
T Consensus 252 Vilk~G~~~t~~e~~~Ave~i~~~Gn~~i~L~~rG~s~yp~~~~~~ldl~~i~~lk~~~~lpV~~D 317 (385)
T 3nvt_A 252 ILLKRGLSATIEEFIGAAEYIMSQGNGKIILCERGIRTYEKATRNTLDISAVPILKKETHLPVMVD 317 (385)
T ss_dssp EEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEEE
T ss_pred EEEecCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCCCccccCHHHHHHHHHhcCCCEEEc
Confidence 999999877889999999999999985454 5653332 22 223358888999999999999653
No 284
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=96.61 E-value=0.019 Score=51.69 Aligned_cols=123 Identities=11% Similarity=0.153 Sum_probs=81.4
Q ss_pred CCHHHHHHHHHHH-hcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEeccCCChHHHHH
Q psy4398 111 ADPERALEAAKKV-EHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIRVFHNEADTIA 187 (306)
Q Consensus 111 ~~~~~~~~aa~~~-~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~ 187 (306)
-|.+.+.+..+.+ +.|.|+|-++-+. |-...-..+.-.++++.+.+.+ .+||.+-+.. .+..++++
T Consensus 29 iD~~~l~~lv~~li~~Gv~Gl~v~GtT----------GE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~-~~t~~ai~ 97 (303)
T 2wkj_A 29 LDKASLRRLVQFNIQQGIDGLYVGGST----------GEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGC-VSTAESQQ 97 (303)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEEESSTT----------TTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCC-SSHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECeec----------cChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCC-CCHHHHHH
Confidence 4567777777755 4599999996332 2222223344455566555544 4788887763 46788999
Q ss_pred HHHHHHHcCCcEEEEcccCCCCCCCCCC---cHHHHHHHHhhCC-CcEEE-e----cCC-CCHHHHHHHHH
Q psy4398 188 LCKRLEACGIIAIGVHGRTKAERPRHRN---RIEMIRTLTQHLK-IPVIA-N----GGS-KEIVDYGGVFS 248 (306)
Q Consensus 188 ~a~~l~~~G~d~i~v~~~~~~~~~~~p~---~~~~v~~i~~~~~-ipvia-~----GGI-~s~~~~~~~l~ 248 (306)
+++.+++.|+|++.+... .|..|. -.++.++|.++++ +|||. | .|+ -+++.+.++.+
T Consensus 98 la~~A~~~Gadavlv~~P----~y~~~s~~~l~~~f~~va~a~~~lPiilYn~P~~tg~~l~~~~~~~La~ 164 (303)
T 2wkj_A 98 LAASAKRYGFDAVSAVTP----FYYPFSFEEHCDHYRAIIDSADGLPMVVYNIPALSGVKLTLDQINTLVT 164 (303)
T ss_dssp HHHHHHHHTCSEEEEECC----CSSCCCHHHHHHHHHHHHHHHTTCCEEEEECHHHHCCCCCHHHHHHHHT
T ss_pred HHHHHHhCCCCEEEecCC----CCCCCCHHHHHHHHHHHHHhCCCCCEEEEeCccccCCCCCHHHHHHHhc
Confidence 999999999999987643 232232 2456788888888 99776 3 354 46777777654
No 285
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=96.59 E-value=0.035 Score=49.94 Aligned_cols=124 Identities=10% Similarity=0.128 Sum_probs=81.1
Q ss_pred CCCceEEEecCCCHHHHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEecc-
Q psy4398 100 EKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRV- 178 (306)
Q Consensus 100 ~~~p~ivql~g~~~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~- 178 (306)
.+.|+++++-|.. +|..+.+.++.||.-|.+..|. -.++++.+...++++...+ .++.|-.-+..
T Consensus 73 ~~VPValHLDHg~--~~e~~~~ai~~GFtSVMiDgS~-----------~p~eeNi~~Tk~vv~~ah~-~gvsVEaELG~i 138 (307)
T 3n9r_A 73 PHIPVALHLDHGT--TFESCEKAVKAGFTSVMIDASH-----------HAFEENLELTSKVVKMAHN-AGVSVEAELGRL 138 (307)
T ss_dssp TTSCEEEEEEEEC--SHHHHHHHHHHTCSEEEECCTT-----------SCHHHHHHHHHHHHHHHHH-TTCEEEEEESCC
T ss_pred CCCcEEEECCCCC--CHHHHHHHHHhCCCcEEEECCC-----------CCHHHHHHHHHHHHHHHHH-cCCeEEEEeeee
Confidence 4578888886542 1333333445689998886553 2345677788888877765 36666666654
Q ss_pred CCC------------hHHHHHHHHHHHHcCCcEEEEcccCCCCCCC----CCCcHHHHHHHHhhCCCcEEEecCC
Q psy4398 179 FHN------------EADTIALCKRLEACGIIAIGVHGRTKAERPR----HRNRIEMIRTLTQHLKIPVIANGGS 237 (306)
Q Consensus 179 g~~------------~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~----~p~~~~~v~~i~~~~~ipvia~GGI 237 (306)
|.. ..+..+..+-+++.|+|.|-+.=.+..+.|. ...+++.+++|++..++|++..||-
T Consensus 139 gG~Ed~~~~~~~~~~yT~Peea~~Fv~~TgvD~LAvaiGt~HG~Yk~~~~p~Ld~~~L~~I~~~~~~PLVlHGgS 213 (307)
T 3n9r_A 139 MGIEDNISVDEKDAVLVNPKEAEQFVKESQVDYLAPAIGTSHGAFKFKGEPKLDFERLQEVKRLTNIPLVLHGAS 213 (307)
T ss_dssp CCC----------CCSCCHHHHHHHHHHHCCSEEEECSSCCSSSBCCSSSCCCCHHHHHHHHHHHCSCEEESSCC
T ss_pred ccccCCcccccccccCCCHHHHHHHHHHHCCCEEEEecCCcccccCCCCCCccCHHHHHHHHhcCCCCeEEeCCC
Confidence 110 1224454455567899999876555444443 2358899999988779999999986
No 286
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=96.58 E-value=0.042 Score=49.70 Aligned_cols=125 Identities=12% Similarity=0.009 Sum_probs=82.7
Q ss_pred CCHHHHHHHHHHH-hcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc-cccEEEEeccCCChHHHHHH
Q psy4398 111 ADPERALEAAKKV-EHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL-SIPVSCKIRVFHNEADTIAL 188 (306)
Q Consensus 111 ~~~~~~~~aa~~~-~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~g~~~~~~~~~ 188 (306)
-|.+.+.+..+.+ +.|+|+|=++.+. |-...-..+.-.++++.+.+.+ .+||++-+.. .+..+++++
T Consensus 26 iD~~~l~~lv~~li~~Gv~Gl~v~GtT----------GE~~~Lt~~Er~~v~~~~v~~~grvpViaGvg~-~~t~~ai~l 94 (313)
T 3dz1_A 26 IDDVSIDRLTDFYAEVGCEGVTVLGIL----------GEAPKLDAAEAEAVATRFIKRAKSMQVIVGVSA-PGFAAMRRL 94 (313)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEEESTGG----------GTGGGSCHHHHHHHHHHHHHHCTTSEEEEECCC-SSHHHHHHH
T ss_pred cCHHHHHHHHHHHHHCCCCEEEeCccC----------cChhhCCHHHHHHHHHHHHHHcCCCcEEEecCC-CCHHHHHHH
Confidence 4667788877765 4599999885332 2222223344455666665554 5788887653 577889999
Q ss_pred HHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCC--CcEEE------ecCCCCHHHHHHHHH
Q psy4398 189 CKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLK--IPVIA------NGGSKEIVDYGGVFS 248 (306)
Q Consensus 189 a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~--ipvia------~GGI~s~~~~~~~l~ 248 (306)
++.+++.|+|++.+.... .......-+++.+.|.++++ +||+. .|---+++.+.++.+
T Consensus 95 a~~A~~~Gadavlv~~P~--~~~s~~~l~~~f~~va~a~~~~lPiilYn~P~~tg~~l~~~~~~~La~ 160 (313)
T 3dz1_A 95 ARLSMDAGAAGVMIAPPP--SLRTDEQITTYFRQATEAIGDDVPWVLQDYPLTLSVVMTPKVIRQIVM 160 (313)
T ss_dssp HHHHHHHTCSEEEECCCT--TCCSHHHHHHHHHHHHHHHCTTSCEEEEECHHHHCCCCCHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECCCC--CCCCHHHHHHHHHHHHHhCCCCCcEEEEeCccccCcCCCHHHHHHHHH
Confidence 999999999999985432 11111113567788999988 99876 344457787777764
No 287
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=96.58 E-value=0.027 Score=50.69 Aligned_cols=123 Identities=15% Similarity=0.115 Sum_probs=81.3
Q ss_pred CCHHHHHHHHHHH-hcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc---cccEEEEeccCCChHHHH
Q psy4398 111 ADPERALEAAKKV-EHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL---SIPVSCKIRVFHNEADTI 186 (306)
Q Consensus 111 ~~~~~~~~aa~~~-~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~---~~pv~vKir~g~~~~~~~ 186 (306)
-|.+.+.+..+.+ +.|.|+|-++.+. |-...-..+.-.++++.+.+.+ .+||.+-+.. .+..+++
T Consensus 25 iD~~~l~~lv~~li~~Gv~gl~v~Gtt----------GE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~-~~t~~ai 93 (301)
T 3m5v_A 25 VDEQSYARLIKRQIENGIDAVVPVGTT----------GESATLTHEEHRTCIEIAVETCKGTKVKVLAGAGS-NATHEAV 93 (301)
T ss_dssp ECHHHHHHHHHHHHHTTCCEEECSSTT----------TTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECCC-SSHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECccc----------cChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCCC-CCHHHHH
Confidence 4667788877765 4599999886432 1112223333355555555544 3688887653 4678899
Q ss_pred HHHHHHHHcCCcEEEEcccCCCCCCCCCC---cHHHHHHHHhhCCCcEEEe------cCCCCHHHHHHHHH
Q psy4398 187 ALCKRLEACGIIAIGVHGRTKAERPRHRN---RIEMIRTLTQHLKIPVIAN------GGSKEIVDYGGVFS 248 (306)
Q Consensus 187 ~~a~~l~~~G~d~i~v~~~~~~~~~~~p~---~~~~v~~i~~~~~ipvia~------GGI~s~~~~~~~l~ 248 (306)
++++.+++.|+|++.+.... |..|. -.++.++|.+++++||+.= |---+++.+.++.+
T Consensus 94 ~la~~a~~~Gadavlv~~P~----y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 160 (301)
T 3m5v_A 94 GLAKFAKEHGADGILSVAPY----YNKPTQQGLYEHYKAIAQSVDIPVLLYNVPGRTGCEISTDTIIKLFR 160 (301)
T ss_dssp HHHHHHHHTTCSEEEEECCC----SSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEcCCC----CCCCCHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCHHHHHHHHh
Confidence 99999999999999886432 22222 2567788888899998743 44456777776654
No 288
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=96.58 E-value=0.0067 Score=55.30 Aligned_cols=149 Identities=12% Similarity=0.072 Sum_probs=85.5
Q ss_pred HHHh-cCCCEEEEccCC-CccccccCCcccccc-CChHHHHHHHHHHHhcccccEEEEe--cc-C--C--C-------hH
Q psy4398 121 KKVE-HDVAAIDINMGC-PKQFSLTGGMGAALL-STPDIACNILTTLISNLSIPVSCKI--RV-F--H--N-------EA 183 (306)
Q Consensus 121 ~~~~-~g~d~veln~gc-P~~~~~~~~~G~~l~-~~~~~~~eiv~~v~~~~~~pv~vKi--r~-g--~--~-------~~ 183 (306)
+.+. .|+|+|-+++-. |. +. ..+. ++.+.+.++.++.++ .++|+.+-+ +. + . + ++
T Consensus 117 e~a~~~GADAVk~lv~~g~d-----~~--~e~~~~q~~~l~rv~~ec~~-~GiPlllEil~y~~~~~~~~~~~~a~~~p~ 188 (332)
T 3iv3_A 117 KRLKEAGADAVKFLLYYDVD-----GD--PQVNVQKQAYIERIGSECQA-EDIPFFLEILTYDETISNNSSVEFAKVKVH 188 (332)
T ss_dssp HHHHHTTCSEEEEEEEECTT-----SC--HHHHHHHHHHHHHHHHHHHH-HTCCEEEEEEECBTTBSCTTSHHHHTTHHH
T ss_pred HHHHHcCCCEEEEEEEcCCC-----ch--HHHHHHHHHHHHHHHHHHHH-cCCceEEEEeccCCCCCCCcchhhhccCHH
Confidence 4444 599998886532 11 00 0000 122344455444433 389988854 22 1 1 1 22
Q ss_pred HHHHHHHHH--HHcCCcEEEEccc-CC---CCC------CCCCCcHHHHHHHHhhCCCcEE-EecCCCCHHHHHHHHHh-
Q psy4398 184 DTIALCKRL--EACGIIAIGVHGR-TK---AER------PRHRNRIEMIRTLTQHLKIPVI-ANGGSKEIVDYGGVFSL- 249 (306)
Q Consensus 184 ~~~~~a~~l--~~~G~d~i~v~~~-~~---~~~------~~~p~~~~~v~~i~~~~~ipvi-a~GGI~s~~~~~~~l~~- 249 (306)
.....++.+ .+.|+|.+-+.-. .. ++. |......+.++++.+.+.+|+| .+||+ +.++..+.++.
T Consensus 189 ~V~~a~R~~~~~elGaDv~Kve~p~~~~~v~g~~~~~~~y~~~ea~~~f~~~~~a~~~P~v~lsgG~-~~~~fl~~v~~A 267 (332)
T 3iv3_A 189 KVNDAMKVFSAERFGIDVLKVEVPVNMVYVEGFAEGEVVYSKEEAAQAFREQEASTDLPYIYLSAGV-SAELFQETLVFA 267 (332)
T ss_dssp HHHHHHHHHTSGGGCCSEEEECCSSCGGGBTTTCSSCCCBCHHHHHHHHHHHHHTCSSCEEEECTTC-CHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcCcCCcEEEEecCCChhhhcccccccccccHHHHHHHHHHHHhcCCCCEEEECCCC-CHHHHHHHHHHH
Confidence 267788888 6779999987411 10 111 1111123456777788899965 79997 45555554432
Q ss_pred --------hhhhccccCCCC--Cch---HHHHHHHHHhcCCC
Q psy4398 250 --------NCAFLRNHYPVE--KLP---KTILYAHCKYKRFE 278 (306)
Q Consensus 250 --------~v~vGrall~~p--~~~---~~~l~~~~~~~g~~ 278 (306)
|+.+||+++++. .+. +...++||+..|.+
T Consensus 268 ~~aGa~f~Gv~~GRnvwq~~v~~~~~~~~~~~~~~l~~~g~~ 309 (332)
T 3iv3_A 268 HKAGAKFNGVLCGRATWAGSVQVYMEEGKEAARQWLRTSGLQ 309 (332)
T ss_dssp HHHTCCCCEEEECHHHHTTHHHHHHHHCHHHHHHHHTTHHHH
T ss_pred HHcCCCcceEEeeHHHHHhhhhhhccccHHHHHHHHHHHhHH
Confidence 559999999885 333 23889999988843
No 289
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=96.57 E-value=0.018 Score=51.61 Aligned_cols=123 Identities=15% Similarity=0.145 Sum_probs=81.0
Q ss_pred CCHHHHHHHHHHHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEeccCCChHHHHH
Q psy4398 111 ADPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIRVFHNEADTIA 187 (306)
Q Consensus 111 ~~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~ 187 (306)
-|.+.+.+..+.+. .|.|+|-++-+. |-...-..+.-.++++.+.+.+ .+||.+-+.. .+..++++
T Consensus 19 iD~~~l~~lv~~li~~Gv~gl~~~Gtt----------GE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~-~~t~~ai~ 87 (292)
T 2ojp_A 19 VCRASLKKLIDYHVASGTSAIVSVGTT----------GESATLNHDEHADVVMMTLDLADGRIPVIAGTGA-NATAEAIS 87 (292)
T ss_dssp BCHHHHHHHHHHHHHHTCCEEEESSTT----------TTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCC-SSHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccc----------cchhhCCHHHHHHHHHHHHHHhCCCCcEEEecCC-ccHHHHHH
Confidence 45677777777654 599999986432 1222223334455555555544 4788888763 46788999
Q ss_pred HHHHHHHcCCcEEEEcccCCCCCCCCCC---cHHHHHHHHhhCCCcEEE-e----cCC-CCHHHHHHHHH
Q psy4398 188 LCKRLEACGIIAIGVHGRTKAERPRHRN---RIEMIRTLTQHLKIPVIA-N----GGS-KEIVDYGGVFS 248 (306)
Q Consensus 188 ~a~~l~~~G~d~i~v~~~~~~~~~~~p~---~~~~v~~i~~~~~ipvia-~----GGI-~s~~~~~~~l~ 248 (306)
+++.+++.|+|++.+.... |..|. -.++.++|.+++++||+. | .|+ -+++.+.++.+
T Consensus 88 la~~a~~~Gadavlv~~P~----y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 153 (292)
T 2ojp_A 88 LTQRFNDSGIVGCLTVTPY----YNRPSQEGLYQHFKAIAEHTDLPQILYNVPSRTGCDLLPETVGRLAK 153 (292)
T ss_dssp HHHHTTTSSCSEEEEECCC----SSCCCHHHHHHHHHHHHTTCSSCEEEECCHHHHSCCCCHHHHHHHHT
T ss_pred HHHHHHhcCCCEEEECCCC----CCCCCHHHHHHHHHHHHHhcCCCEEEEeCcchhccCCCHHHHHHHHc
Confidence 9999999999999876432 32232 245678888888999776 3 243 46777777654
No 290
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=96.57 E-value=0.043 Score=49.12 Aligned_cols=123 Identities=11% Similarity=0.136 Sum_probs=81.3
Q ss_pred CCHHHHHHHHHH-Hh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEeccCCChHHHH
Q psy4398 111 ADPERALEAAKK-VE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIRVFHNEADTI 186 (306)
Q Consensus 111 ~~~~~~~~aa~~-~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~ 186 (306)
-|.+.+.+..+. ++ .|.|+|-++.+. |-...-..+.-.++++.+.+.+ .+||.+-+.. .+..+++
T Consensus 21 iD~~~l~~lv~~li~~~Gv~gl~~~Gtt----------GE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~-~~t~~ai 89 (293)
T 1f6k_A 21 INEKGLRQIIRHNIDKMKVDGLYVGGST----------GENFMLSTEEKKEIFRIAKDEAKDQIALIAQVGS-VNLKEAV 89 (293)
T ss_dssp BCHHHHHHHHHHHHHTSCCSEEEESSGG----------GTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCC-SCHHHHH
T ss_pred cCHHHHHHHHHHHHhhCCCcEEEeCccc----------cchhhCCHHHHHHHHHHHHHHhCCCCeEEEecCC-CCHHHHH
Confidence 456777777774 46 699999985331 2222223344455666665544 4788887763 4678899
Q ss_pred HHHHHHHHcCCcEEEEcccCCCCCCCCCC---cHHHHHHHHhhCCCcEEE-e----cCC-CCHHHHHHHHH
Q psy4398 187 ALCKRLEACGIIAIGVHGRTKAERPRHRN---RIEMIRTLTQHLKIPVIA-N----GGS-KEIVDYGGVFS 248 (306)
Q Consensus 187 ~~a~~l~~~G~d~i~v~~~~~~~~~~~p~---~~~~v~~i~~~~~ipvia-~----GGI-~s~~~~~~~l~ 248 (306)
++++.+++.|+|++.+... .|..|. -.++.++|.+++++||+. | .|+ -+++.+.++.+
T Consensus 90 ~la~~a~~~Gadavlv~~P----~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 156 (293)
T 1f6k_A 90 ELGKYATELGYDCLSAVTP----FYYKFSFPEIKHYYDTIIAETGSNMIVYSIPFLTGVNMGIEQFGELYK 156 (293)
T ss_dssp HHHHHHHHHTCSEEEEECC----CSSCCCHHHHHHHHHHHHHHHCCCEEEEECHHHHCCCCCHHHHHHHHT
T ss_pred HHHHHHHhcCCCEEEECCC----CCCCCCHHHHHHHHHHHHHhCCCCEEEEECccccCcCCCHHHHHHHhc
Confidence 9999999999999987643 232222 245678888888999766 3 344 47777777654
No 291
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=96.51 E-value=0.0023 Score=54.54 Aligned_cols=69 Identities=12% Similarity=0.011 Sum_probs=50.3
Q ss_pred HHHHHHcCCcEEEEcccCC---CCCCCCCCcHHHHHHHHhh--CCCcEEEecCCCCHHHHHHHHHh---hhhhccccCC
Q psy4398 189 CKRLEACGIIAIGVHGRTK---AERPRHRNRIEMIRTLTQH--LKIPVIANGGSKEIVDYGGVFSL---NCAFLRNHYP 259 (306)
Q Consensus 189 a~~l~~~G~d~i~v~~~~~---~~~~~~p~~~~~v~~i~~~--~~ipvia~GGI~s~~~~~~~l~~---~v~vGrall~ 259 (306)
+..++ .|+|+|.+..... ...+..+..++.++++++. .++||++.|||+ ++++.++++. ++.++++++.
T Consensus 101 ~~~A~-~GaDyv~~g~vf~t~sk~~~~~~~g~~~l~~~~~~~~~~iPviaiGGI~-~~nv~~~~~~Ga~gVav~s~i~~ 177 (210)
T 3ceu_A 101 VKNRK-HFYDYVFMSPIYDSISKVNYYSTYTAEELREAQKAKIIDSKVMALGGIN-EDNLLEIKDFGFGGAVVLGDLWN 177 (210)
T ss_dssp HHTTG-GGSSEEEECCCC---------CCCCHHHHHHHHHTTCSSTTEEEESSCC-TTTHHHHHHTTCSEEEESHHHHT
T ss_pred HHHHh-hCCCEEEECCcCCCCCCCCCCCCCCHHHHHHHHHhcCCCCCEEEECCCC-HHHHHHHHHhCCCEEEEhHHhHc
Confidence 34445 8999999765421 1112235688999999987 689999999998 8889888886 4589998865
No 292
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=96.51 E-value=0.041 Score=46.56 Aligned_cols=140 Identities=21% Similarity=0.205 Sum_probs=85.1
Q ss_pred eEEEecCCCHHHHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhc--ccccEEEEeccCCC
Q psy4398 104 IILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISN--LSIPVSCKIRVFHN 181 (306)
Q Consensus 104 ~ivql~g~~~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~--~~~pv~vKir~g~~ 181 (306)
+++.+--.+.++..+.++.+......++++.+.= -.+| + ++++++|+. ..+++++|+- .-
T Consensus 2 lila~D~~~l~~~~~~~~~~~~~~~~~kv~~~~f------~~~G------~----~~i~~lr~~~~~~v~~D~kl~--DI 63 (208)
T 2czd_A 2 IVLALDVYEGERAIKIAKSVKDYISMIKVNWPLI------LGSG------V----DIIRRLKEETGVEIIADLKLA--DI 63 (208)
T ss_dssp EEEECCCCSHHHHHHHHHHHGGGCSEEEEEHHHH------HHHC------T----THHHHHHHHHCCEEEEEEEEC--SC
T ss_pred eEEEecCCCHHHHHHHHHHhcccccEEEecHHHH------HhhC------H----HHHHHHHHcCCCEEEEEeeeC--ch
Confidence 3444444455555555554444567788864320 0122 2 345566665 5678888887 33
Q ss_pred hHHHHHHHHHHHHcCCcEEEEcccCC--------C----------------CC----------------C----CCCCcH
Q psy4398 182 EADTIALCKRLEACGIIAIGVHGRTK--------A----------------ER----------------P----RHRNRI 217 (306)
Q Consensus 182 ~~~~~~~a~~l~~~G~d~i~v~~~~~--------~----------------~~----------------~----~~p~~~ 217 (306)
..+....++.+.++|+|.+++|.-.. + .. . ..+...
T Consensus 64 ~~t~~~~v~~~~~~Gad~vtvh~~~g~~~i~~~~~~~gv~vl~~t~~~~~~~~~~~~v~~~~~~a~~~G~~G~~~~~~~~ 143 (208)
T 2czd_A 64 PNTNRLIARKVFGAGADYVIVHTFVGRDSVMAVKELGEIIMVVEMSHPGALEFINPLTDRFIEVANEIEPFGVIAPGTRP 143 (208)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEESTTCHHHHHHHHTTSEEEEECCCCSGGGGTTTGGGHHHHHHHHHHHCCSEEECCCSST
T ss_pred HHHHHHHHHHHHhcCCCEEEEeccCCHHHHHHHHHhCCcEEEEecCCcchhhHHHHHHHHHHHHHHHhCCcEEEECCCCh
Confidence 34566778888899999999985320 0 00 0 012234
Q ss_pred HHHHHHHhhCC-CcEEEecCCCCH-HHHHHHHHhhh---hhccccCCCC
Q psy4398 218 EMIRTLTQHLK-IPVIANGGSKEI-VDYGGVFSLNC---AFLRNHYPVE 261 (306)
Q Consensus 218 ~~v~~i~~~~~-ipvia~GGI~s~-~~~~~~l~~~v---~vGrall~~p 261 (306)
+.++++++..+ -+++..|||+.- .+..++++.|+ .+||+++..+
T Consensus 144 ~~i~~lr~~~~~~~~iv~gGI~~~g~~~~~~~~aGad~vvvGr~I~~a~ 192 (208)
T 2czd_A 144 ERIGYIRDRLKEGIKILAPGIGAQGGKAKDAVKAGADYIIVGRAIYNAP 192 (208)
T ss_dssp HHHHHHHHHSCTTCEEEECCCCSSTTHHHHHHHHTCSEEEECHHHHTSS
T ss_pred HHHHHHHHhCCCCeEEEECCCCCCCCCHHHHHHcCCCEEEEChHHhcCC
Confidence 56677887775 367899999852 26777777654 8999998754
No 293
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=96.50 E-value=0.14 Score=46.24 Aligned_cols=186 Identities=11% Similarity=0.059 Sum_probs=102.5
Q ss_pred CceEEccCCCCCCHHHHHHHHHcCCCEEEecceechhhhhhhhhhhcccccccccCCCCCceeeecCCCCCCceEEEec-
Q psy4398 31 NKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDGSVVFRTCPREKNKIILQIG- 109 (306)
Q Consensus 31 n~i~lAPm~~~t~~~~r~~~~~~G~g~~~te~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~ivql~- 109 (306)
+..+..|.+ -|.....++.+.|+..+++...+..-...+.+. .+.++-.+.+.- -+.+.+.++ +.|+++-+=
T Consensus 38 ~~~i~~~~a--yD~~sA~i~e~aGfdai~vs~~~~a~~~lG~pD-~~~vt~~em~~~--~~~I~r~~~--~~PviaD~d~ 110 (318)
T 1zlp_A 38 HGSVLMPGV--QDALSAAVVEKTGFHAAFVSGYSVSAAMLGLPD-FGLLTTTEVVEA--TRRITAAAP--NLCVVVDGDT 110 (318)
T ss_dssp SSSEEEEEE--CSHHHHHHHHHTTCSEEEECHHHHHHHHHCCCS-SSCSCHHHHHHH--HHHHHHHSS--SSEEEEECTT
T ss_pred CCcEEEecC--CCHHHHHHHHHcCCCEEEECcHHHhhHhcCCCC-CCCCCHHHHHHH--HHHHHhhcc--CCCEEEeCCC
Confidence 334444443 566666777789998888764321100111100 011100000000 011222221 578988873
Q ss_pred C-CCHHHHHHHHHHHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc-cccEEEEeccCC----Ch
Q psy4398 110 T-ADPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL-SIPVSCKIRVFH----NE 182 (306)
Q Consensus 110 g-~~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~g~----~~ 182 (306)
| .++++..+.++++. .|+++|.|.=+...+ +....|+.-+-..+...+-|++++++. ..++.+--|..- ..
T Consensus 111 Gyg~~~~v~~tv~~l~~aGaagv~iED~~~~k--~cgH~~gk~L~p~~e~~~rI~Aa~~A~~~~~~~I~ARtda~a~~gl 188 (318)
T 1zlp_A 111 GGGGPLNVQRFIRELISAGAKGVFLEDQVWPK--KCGHMRGKAVVPAEEHALKIAAAREAIGDSDFFLVARTDARAPHGL 188 (318)
T ss_dssp CSSSHHHHHHHHHHHHHTTCCEEEEECBCSSC--CCSSSSCCCBCCHHHHHHHHHHHHHHHTTSCCEEEEEECTHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCcEEEECCCCCCc--cccCCCCCccCCHHHHHHHHHHHHHhcccCCcEEEEeeHHhhhcCH
Confidence 2 27888888877665 599999997553211 112222222233344444455555443 333444444211 12
Q ss_pred HHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEe
Q psy4398 183 ADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIAN 234 (306)
Q Consensus 183 ~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~ 234 (306)
+++++=++.++++|+|.|.+.+. .+.+.++++.+.+++|+.+|
T Consensus 189 ~~ai~Ra~Ay~eAGAd~i~~e~~---------~~~e~~~~i~~~l~~P~lan 231 (318)
T 1zlp_A 189 EEGIRRANLYKEAGADATFVEAP---------ANVDELKEVSAKTKGLRIAN 231 (318)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCC---------CSHHHHHHHHHHSCSEEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEcCC---------CCHHHHHHHHHhcCCCEEEE
Confidence 56888889999999999999763 36689999999999999765
No 294
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=96.48 E-value=0.026 Score=51.14 Aligned_cols=137 Identities=14% Similarity=0.147 Sum_probs=89.1
Q ss_pred CCCceEEEecCC-CHHHHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEecc
Q psy4398 100 EKNKIILQIGTA-DPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRV 178 (306)
Q Consensus 100 ~~~p~ivql~g~-~~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~ 178 (306)
.+.|+++.+-|. +.+. +.+.++.||.-|.+..|. ..++++.+...++++...+ .++.|-.-+..
T Consensus 74 ~~VPValHlDHg~~~e~---i~~ai~~GFtSVMiDgS~-----------~p~eENi~~Tk~vv~~ah~-~gvsVEaELG~ 138 (323)
T 2isw_A 74 PDIPICIHLDHGDTLES---VKMAIDLGFSSVMIDASH-----------HPFDENVRITKEVVAYAHA-RSVSVEAELGT 138 (323)
T ss_dssp TTSCEEEEEEEECSHHH---HHHHHHTTCSEEEECCTT-----------SCHHHHHHHHHHHHHHHHT-TTCEEEEEESC
T ss_pred CCCcEEEECCCCCCHHH---HHHHHHcCCCeEEecCCC-----------CCHHHHHHHHHHHHHHHHH-cCCeEEEEeCC
Confidence 356888887654 3333 333445688888886442 2345677788888877654 46666666654
Q ss_pred -CC-C--------hHHHHHHHHHHHHcCCcEEEEcccCCCCCCC--C--C--CcHHHHHHHHhhCCCcEEEecCC-----
Q psy4398 179 -FH-N--------EADTIALCKRLEACGIIAIGVHGRTKAERPR--H--R--NRIEMIRTLTQHLKIPVIANGGS----- 237 (306)
Q Consensus 179 -g~-~--------~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~--~--p--~~~~~v~~i~~~~~ipvia~GGI----- 237 (306)
|. . ..+..+..+.+++.|+|.|-+.=.+..+.|. + . .+++.+++|++.+++|++..||-
T Consensus 139 vgg~Ed~v~~~~~yTdPeea~~Fv~~TgvD~LAvaiGt~HG~Yk~~~~p~~~L~~~~L~~I~~~~~vpLVlHGgSsvp~~ 218 (323)
T 2isw_A 139 LGGIEEDVQNTVQLTEPQDAKKFVELTGVDALAVAIGTSHGAYKFKSESDIRLAIDRVKTISDLTGIPLVMHGSSSVPKD 218 (323)
T ss_dssp C----------CCCCCHHHHHHHHHHHCCSEEEECSSCCSSSBCCCC----CCCCHHHHHHHHHHCSCEEECSCCCCCHH
T ss_pred ccCCccCcccccccCCHHHHHHHHHHHCCCEEEEecCccccccCCCCCcccccCHHHHHHHHHHhCCCeEEECCCCCCHH
Confidence 11 1 1234555556667899999886555545444 2 2 56899999999999999999965
Q ss_pred ----------------C-CHHHHHHHHHhhh
Q psy4398 238 ----------------K-EIVDYGGVFSLNC 251 (306)
Q Consensus 238 ----------------~-s~~~~~~~l~~~v 251 (306)
. +.++.+++++.|+
T Consensus 219 ~~~~~~~~gg~~~~~~Gvp~e~i~~ai~~GV 249 (323)
T 2isw_A 219 VKDMINKYGGKMPDAVGVPIESIVHAIGEGV 249 (323)
T ss_dssp HHHHHHHTTCCCTTCBCCCHHHHHHHHHTTE
T ss_pred HHHHHHHhccccccCCCCCHHHHHHHHHCCC
Confidence 2 3566777777765
No 295
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=96.47 E-value=0.017 Score=51.67 Aligned_cols=122 Identities=19% Similarity=0.179 Sum_probs=74.8
Q ss_pred CCHHHHHHHHHHH-hcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEeccCCChHHHHH
Q psy4398 111 ADPERALEAAKKV-EHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIRVFHNEADTIA 187 (306)
Q Consensus 111 ~~~~~~~~aa~~~-~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~ 187 (306)
-|.+.+.+..+.+ +.|.|+|-++-+. |-...-..+.-.++++.+.+.+ .+||.+-+.. .+..++++
T Consensus 19 iD~~~l~~lv~~li~~Gv~gl~~~Gtt----------GE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg~-~~t~~ai~ 87 (291)
T 3a5f_A 19 VDFDKLSELIEWHIKSKTDAIIVCGTT----------GEATTMTETERKETIKFVIDKVNKRIPVIAGTGS-NNTAASIA 87 (291)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSGG----------GTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCC-SSHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccc----------cChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCc-ccHHHHHH
Confidence 4556777777755 4599999986332 2222223334455555555544 4788888773 46788999
Q ss_pred HHHHHHHcCCcEEEEcccCCCCCCCCCC---cHHHHHHHHhhCCCcEEE-e-----cCCCCHHHHHHHH
Q psy4398 188 LCKRLEACGIIAIGVHGRTKAERPRHRN---RIEMIRTLTQHLKIPVIA-N-----GGSKEIVDYGGVF 247 (306)
Q Consensus 188 ~a~~l~~~G~d~i~v~~~~~~~~~~~p~---~~~~v~~i~~~~~ipvia-~-----GGI~s~~~~~~~l 247 (306)
+++.+++.|+|++.+.... |..|. -+++.++|.+++++||+. | |---+++.+.++.
T Consensus 88 la~~a~~~Gadavlv~~P~----y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La 152 (291)
T 3a5f_A 88 MSKWAESIGVDGLLVITPY----YNKTTQKGLVKHFKAVSDAVSTPIIIYNVPGRTGLNITPGTLKELC 152 (291)
T ss_dssp HHHHHHHTTCSEEEEECCC----SSCCCHHHHHHHC-CTGGGCCSCEEEEECHHHHSCCCCHHHHHHHT
T ss_pred HHHHHHhcCCCEEEEcCCC----CCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHH
Confidence 9999999999999876432 22221 133445666667777655 2 2223566655554
No 296
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=96.45 E-value=0.042 Score=49.30 Aligned_cols=122 Identities=12% Similarity=0.151 Sum_probs=77.0
Q ss_pred CCceEEEec-C-CCHHHHHHHHHHHh-cCCCEEEEccCCCccccccCCc-cccccCChHHHHHHHHHHHhc-ccccEEEE
Q psy4398 101 KNKIILQIG-T-ADPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGM-GAALLSTPDIACNILTTLISN-LSIPVSCK 175 (306)
Q Consensus 101 ~~p~ivql~-g-~~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~-G~~l~~~~~~~~eiv~~v~~~-~~~pv~vK 175 (306)
+.|+++-+- | .++++..+.++.+. .|+.+|.|.=..-.+ +.+.. |..+....+.+..| ++.+++ .+.++.+-
T Consensus 83 ~~PviaD~d~Gyg~~~~v~~~v~~l~~aGaagv~iEDq~~~k--~cGh~~gk~l~~~~e~~~ri-~Aa~~A~~~~~~~I~ 159 (298)
T 3eoo_A 83 NLPLLVDIDTGWGGAFNIARTIRSFIKAGVGAVHLEDQVGQK--RCGHRPGKECVPAGEMVDRI-KAAVDARTDETFVIM 159 (298)
T ss_dssp CSCEEEECTTCSSSHHHHHHHHHHHHHTTCSEEEEECBCCCC--CTTCCCCCCBCCHHHHHHHH-HHHHHHCSSTTSEEE
T ss_pred CCeEEEECCCCCCCHHHHHHHHHHHHHhCCeEEEECCCCCCc--ccCCCCCCeecCHHHHHHHH-HHHHHhccCCCeEEE
Confidence 468888762 2 37888888888765 599999996442111 11111 22233333334443 444333 24455554
Q ss_pred eccC----CChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEe
Q psy4398 176 IRVF----HNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIAN 234 (306)
Q Consensus 176 ir~g----~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~ 234 (306)
-|.. ...+++++=++++.++|+|.|-+++. .+.+.++++.+++++|+.+|
T Consensus 160 ARTDa~~~~gldeai~Ra~ay~~AGAD~if~~~~---------~~~ee~~~~~~~~~~Pl~~n 213 (298)
T 3eoo_A 160 ARTDAAAAEGIDAAIERAIAYVEAGADMIFPEAM---------KTLDDYRRFKEAVKVPILAN 213 (298)
T ss_dssp EEECTHHHHHHHHHHHHHHHHHHTTCSEEEECCC---------CSHHHHHHHHHHHCSCBEEE
T ss_pred EeehhhhhcCHHHHHHHHHhhHhcCCCEEEeCCC---------CCHHHHHHHHHHcCCCeEEE
Confidence 4431 12456778888899999999998764 25688999999999999886
No 297
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=96.44 E-value=0.049 Score=48.54 Aligned_cols=119 Identities=19% Similarity=0.149 Sum_probs=79.6
Q ss_pred CCHHHHHHHHHHH-hcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEeccCCChHHHHHHH
Q psy4398 111 ADPERALEAAKKV-EHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFHNEADTIALC 189 (306)
Q Consensus 111 ~~~~~~~~aa~~~-~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~a 189 (306)
-|.+.+.+..+.+ +.|.|+|-++-+. |-...-..+.-.++++.+.+.++. |.+-+.. .+..++++++
T Consensus 16 iD~~~l~~lv~~li~~Gv~gl~v~Gtt----------GE~~~Ls~~Er~~v~~~~~~~~~g-vi~Gvg~-~~t~~ai~la 83 (286)
T 2r91_A 16 LDPELFANHVKNITSKGVDVVFVAGTT----------GLGPALSLQEKMELTDAATSAARR-VIVQVAS-LNADEAIALA 83 (286)
T ss_dssp ECHHHHHHHHHHHHHTTCCEEEETSTT----------TTGGGSCHHHHHHHHHHHHHHCSS-EEEECCC-SSHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHCCCCEEEECccc----------cChhhCCHHHHHHHHHHHHHHhCC-EEEeeCC-CCHHHHHHHH
Confidence 3566777777755 4599999986432 222223444556777777776644 6666652 4678899999
Q ss_pred HHHHHcCCcEEEEcccCCCCCCCC-CC---cHHHHHHHHhhCCCcEEE-e----cCC-CCHHHHHH
Q psy4398 190 KRLEACGIIAIGVHGRTKAERPRH-RN---RIEMIRTLTQHLKIPVIA-N----GGS-KEIVDYGG 245 (306)
Q Consensus 190 ~~l~~~G~d~i~v~~~~~~~~~~~-p~---~~~~v~~i~~~~~ipvia-~----GGI-~s~~~~~~ 245 (306)
+.++++|+|++.+.... |.. |. -.++.++|.+++++||+. | .|+ -+++.+.+
T Consensus 84 ~~A~~~Gadavlv~~P~----y~~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~ 145 (286)
T 2r91_A 84 KYAESRGAEAVASLPPY----YFPRLSERQIAKYFRDLCSAVSIPVFLYNYPAAVGRDVDARAAKE 145 (286)
T ss_dssp HHHHHTTCSEEEECCSC----SSTTCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSSCCCHHHHHH
T ss_pred HHHHhcCCCEEEEcCCc----CCCCCCHHHHHHHHHHHHHhcCCCEEEEeChhhcCCCCCHHHHHh
Confidence 99999999999986432 322 22 246678899999999876 2 243 36666655
No 298
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=96.41 E-value=0.046 Score=48.81 Aligned_cols=120 Identities=15% Similarity=0.077 Sum_probs=81.0
Q ss_pred CCHHHHHHHHHHH-hcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEeccCCChHHHHHHH
Q psy4398 111 ADPERALEAAKKV-EHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFHNEADTIALC 189 (306)
Q Consensus 111 ~~~~~~~~aa~~~-~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~a 189 (306)
-|.+.+.+..+.+ +.|.|+|-++.+. |-...-..+.-.++++.+.+.++. |.+-+.. .+..++++++
T Consensus 17 iD~~~l~~lv~~li~~Gv~gl~v~GtT----------GE~~~Ls~eEr~~v~~~~~~~~~g-ViaGvg~-~~t~~ai~la 84 (288)
T 2nuw_A 17 VNVDALKTHAKNLLEKGIDAIFVNGTT----------GLGPALSKDEKRQNLNALYDVTHK-LIFQVGS-LNLNDVMELV 84 (288)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEETSTT----------TTGGGSCHHHHHHHHHHHTTTCSC-EEEECCC-SCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccc----------cChhhCCHHHHHHHHHHHHHHhCC-eEEeeCC-CCHHHHHHHH
Confidence 4567777777755 4599999986432 222233455557888888877754 6666552 4678899999
Q ss_pred HHHHHcCCcEEEEcccCCCCCCCC-CC---cHHHHHHHHhhCCCcEEE-e----cCC-CCHHHHHHH
Q psy4398 190 KRLEACGIIAIGVHGRTKAERPRH-RN---RIEMIRTLTQHLKIPVIA-N----GGS-KEIVDYGGV 246 (306)
Q Consensus 190 ~~l~~~G~d~i~v~~~~~~~~~~~-p~---~~~~v~~i~~~~~ipvia-~----GGI-~s~~~~~~~ 246 (306)
+.+++.|+|++.+.... |.. |. -+++.++|.+++++||+. | .|+ -+++.+.++
T Consensus 85 ~~A~~~Gadavlv~~P~----y~~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~L 147 (288)
T 2nuw_A 85 KFSNEMDILGVSSHSPY----YFPRLPEKFLAKYYEEIARISSHSLYIYNYPAATGYDIPPSILKSL 147 (288)
T ss_dssp HHHHTSCCSEEEECCCC----SSCSCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHTTT
T ss_pred HHHHhcCCCEEEEcCCc----CCCCCCHHHHHHHHHHHHHhcCCCEEEEECchHhCcCCCHHHHhcc
Confidence 99999999999886432 322 22 256778899999999876 3 243 355655544
No 299
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=96.39 E-value=0.017 Score=52.06 Aligned_cols=122 Identities=13% Similarity=0.079 Sum_probs=77.8
Q ss_pred CCHHHHHHHHHHH-hcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEeccCCChHHHHH
Q psy4398 111 ADPERALEAAKKV-EHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIRVFHNEADTIA 187 (306)
Q Consensus 111 ~~~~~~~~aa~~~-~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~ 187 (306)
-|.+.+.+..+.+ +.|.|+|-++.+. |-...-..+.-.++++.+.+.+ .+||.+-+.. .+..++++
T Consensus 22 iD~~~l~~lv~~li~~Gv~gl~v~Gtt----------GE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~-~~t~~ai~ 90 (300)
T 3eb2_A 22 VRADVMGRLCDDLIQAGVHGLTPLGST----------GEFAYLGTAQREAVVRATIEAAQRRVPVVAGVAS-TSVADAVA 90 (300)
T ss_dssp BCHHHHHHHHHHHHHTTCSCBBTTSGG----------GTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEEE-SSHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccc----------cCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCC-CCHHHHHH
Confidence 4567777777765 4599999775321 2222223333355555555544 4789887763 46788999
Q ss_pred HHHHHHHcCCcEEEEcccCCCCCCCCCC---cHHHHHHHHhhCCCcEEEe------cCCCCHHHHHHHH
Q psy4398 188 LCKRLEACGIIAIGVHGRTKAERPRHRN---RIEMIRTLTQHLKIPVIAN------GGSKEIVDYGGVF 247 (306)
Q Consensus 188 ~a~~l~~~G~d~i~v~~~~~~~~~~~p~---~~~~v~~i~~~~~ipvia~------GGI~s~~~~~~~l 247 (306)
+++.+++.|+|++.+.... |..|. -.++.++|.+++++||+.= |---+++.+.++.
T Consensus 91 la~~a~~~Gadavlv~~P~----y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La 155 (300)
T 3eb2_A 91 QAKLYEKLGADGILAILEA----YFPLKDAQIESYFRAIADAVEIPVVIYTNPQFQRSDLTLDVIARLA 155 (300)
T ss_dssp HHHHHHHHTCSEEEEEECC----SSCCCHHHHHHHHHHHHHHCSSCEEEEECTTTCSSCCCHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEcCCC----CCCCCHHHHHHHHHHHHHHCCCCEEEEECccccCCCCCHHHHHHHH
Confidence 9999999999999875432 22221 2456788888888887642 2223566665553
No 300
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=96.37 E-value=0.092 Score=46.85 Aligned_cols=188 Identities=13% Similarity=0.144 Sum_probs=105.3
Q ss_pred ccccCCceEEccCCCCCCHHHHHHHHHcCCCEEEecceechhhhhhhhhhhcccccccccCCCCCceeeecCCCCCCceE
Q psy4398 26 NINYSNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDGSVVFRTCPREKNKII 105 (306)
Q Consensus 26 ~l~l~n~i~lAPm~~~t~~~~r~~~~~~G~g~~~te~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~i 105 (306)
.+.-++..+..|. .-|.....++.+.|+..+++......-...+.+. .+.++-.+... .........+.|++
T Consensus 15 ~l~~~~~~i~~~~--a~D~~sA~i~e~aGf~ai~vs~s~~a~~~lG~pD-~~~vt~~em~~-----~~~~I~r~~~~Pvi 86 (287)
T 3b8i_A 15 ALLDSSRCYHTAS--VFDPMSARIAADLGFECGILGGSVASLQVLAAPD-FALITLSEFVE-----QATRIGRVARLPVI 86 (287)
T ss_dssp HHHHSSCCEECEE--CCSHHHHHHHHHTTCSCEEECHHHHHHHHHSCCS-SSCSCHHHHHH-----HHHHHHTTCSSCEE
T ss_pred HHHhCCCcEEEec--CCCHHHHHHHHHcCCCEEEeCcHHHHHHhcCCCC-CCCCCHHHHHH-----HHHHHHhcCCCCEE
Confidence 3333344444444 4567777777789997777653311100011000 01110000000 00011122356888
Q ss_pred EEec-C-CCHHHHHHHHHHHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc-c--ccEEEEecc-
Q psy4398 106 LQIG-T-ADPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL-S--IPVSCKIRV- 178 (306)
Q Consensus 106 vql~-g-~~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~--~pv~vKir~- 178 (306)
+-+= | .++++..+.++++. .|+++|.|.=+... +.+ +...+. .-..+...+-|++++++- + .-|..|.-.
T Consensus 87 aD~d~Gyg~~~~~~~~v~~l~~aGa~gv~iED~~~p-Krc-gh~~gk-l~~~~e~~~~I~aa~~a~~~~~~~i~aRtdaa 163 (287)
T 3b8i_A 87 ADADHGYGNALNVMRTVVELERAGIAALTIEDTLLP-AQF-GRKSTD-LICVEEGVGKIRAALEARVDPALTIIARTNAE 163 (287)
T ss_dssp EECTTCSSSHHHHHHHHHHHHHHTCSEEEEECBCCS-CCT-TTCTTC-BCCHHHHHHHHHHHHHHCCSTTSEEEEEEETT
T ss_pred EECCCCCCCHHHHHHHHHHHHHhCCeEEEEcCCCCc-ccc-CCCCCC-ccCHHHHHHHHHHHHHcCCCCCcEEEEechhh
Confidence 8763 2 27888888887665 59999999755321 111 112223 345555556666665543 3 334444432
Q ss_pred CCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEE
Q psy4398 179 FHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIA 233 (306)
Q Consensus 179 g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia 233 (306)
....+++++=++.++++|+|.|.+.+. .+.+.++++.+.+++|++.
T Consensus 164 ~~gl~~ai~Ra~ay~eAGAd~i~~e~~---------~~~~~~~~i~~~~~~P~ii 209 (287)
T 3b8i_A 164 LIDVDAVIQRTLAYQEAGADGICLVGV---------RDFAHLEAIAEHLHIPLML 209 (287)
T ss_dssp TSCHHHHHHHHHHHHHTTCSEEEEECC---------CSHHHHHHHHTTCCSCEEE
T ss_pred hcCHHHHHHHHHHHHHcCCCEEEecCC---------CCHHHHHHHHHhCCCCEEE
Confidence 123467889999999999999999763 3568999999999999884
No 301
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=96.36 E-value=0.053 Score=46.09 Aligned_cols=134 Identities=10% Similarity=0.032 Sum_probs=81.8
Q ss_pred CceEEEec-CCCHHHHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEeccCC
Q psy4398 102 NKIILQIG-TADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFH 180 (306)
Q Consensus 102 ~p~ivql~-g~~~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~ 180 (306)
.++++-+. +..++.+.+ ..++.|+|.|-+|.... .+.+.++++.+++ .+.++.+++-.+.
T Consensus 57 ~~v~lD~kl~dip~t~~~--~~~~~Gad~itvh~~~g----------------~~~l~~~~~~~~~-~g~~~~~~ll~~~ 117 (216)
T 1q6o_A 57 KIVLADAKIADAGKILSR--MCFEANADWVTVICCAD----------------INTAKGALDVAKE-FNGDVQIELTGYW 117 (216)
T ss_dssp SEEEEEEEECSCHHHHHH--HHHHTTCSEEEEETTSC----------------HHHHHHHHHHHHH-TTCEEEEEECSCC
T ss_pred CeEEEEEEecccHHHHHH--HHHhCCCCEEEEeccCC----------------HHHHHHHHHHHHH-cCCCceeeeeeCC
Confidence 45555442 245666655 33346999999985431 2335566677665 3667666554124
Q ss_pred ChHHHHHHHHHHHHcCCcEEEEccc--CCCCCCCCCCcHHHHHHHHhhC--CCcEEEecCCCCHHHHHHHHHhhh---hh
Q psy4398 181 NEADTIALCKRLEACGIIAIGVHGR--TKAERPRHRNRIEMIRTLTQHL--KIPVIANGGSKEIVDYGGVFSLNC---AF 253 (306)
Q Consensus 181 ~~~~~~~~a~~l~~~G~d~i~v~~~--~~~~~~~~p~~~~~v~~i~~~~--~ipvia~GGI~s~~~~~~~l~~~v---~v 253 (306)
+ .. -++.+++.|.+.+.+|-. +...+..+ ..+.++++++.. ++||++.|||+ ++++.++++.|+ .+
T Consensus 118 t-~~---~~~~l~~~~~~~~vl~~a~~~~~~G~~g--~~~~i~~lr~~~~~~~~i~v~GGI~-~~~~~~~~~aGad~ivv 190 (216)
T 1q6o_A 118 T-WE---QAQQWRDAGIGQVVYHRSRDAQAAGVAW--GEADITAIKRLSDMGFKVTVTGGLA-LEDLPLFKGIPIHVFIA 190 (216)
T ss_dssp C-HH---HHHHHHHTTCCEEEEECCHHHHHTTCCC--CHHHHHHHHHHHHTTCEEEEESSCC-GGGGGGGTTSCCSEEEE
T ss_pred C-hh---hHHHHHhcCcHHHHHHHHHHHHhcCCCC--CHHHHHHHHHhcCCCCcEEEECCcC-hhhHHHHHHcCCCEEEE
Confidence 4 22 223445668877776421 11112222 346667777766 68899999998 788888887754 99
Q ss_pred ccccCCCC
Q psy4398 254 LRNHYPVE 261 (306)
Q Consensus 254 Grall~~p 261 (306)
||+++..+
T Consensus 191 G~~I~~a~ 198 (216)
T 1q6o_A 191 GRSIRDAA 198 (216)
T ss_dssp SHHHHTSS
T ss_pred eehhcCCC
Confidence 99998643
No 302
>2ozt_A TLR1174 protein; structural genomics, O-succinylbenzoate synthase, PSI, protein structure initiative; 1.42A {Synechococcus elongatus} PDB: 3h7v_A
Probab=96.35 E-value=0.078 Score=48.23 Aligned_cols=117 Identities=12% Similarity=0.134 Sum_probs=86.4
Q ss_pred CCHHHHHHHHHHH-hcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhccc--ccEEEEeccCCChHHHHH
Q psy4398 111 ADPERALEAAKKV-EHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLS--IPVSCKIRVFHNEADTIA 187 (306)
Q Consensus 111 ~~~~~~~~aa~~~-~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~--~pv~vKir~g~~~~~~~~ 187 (306)
.+++++.+.++.+ ++||..+-+.++. .+++.-.+.++++|+.++ ..+.+-...+|+.+++.+
T Consensus 115 ~~~e~~~~~a~~~~~~G~~~~KiKvg~---------------~~~~~d~~~v~avr~~~g~~~~L~vDaN~~~~~~~A~~ 179 (332)
T 2ozt_A 115 GSGQAALEQWQQSWQRGQTTFKWKVGV---------------MSPEEEQAILKALLAALPPGAKLRLDANGSWDRATANR 179 (332)
T ss_dssp CTGGGHHHHHHHHHHTTCCEEEEECSS---------------SCHHHHHHHHHHHHHHSCTTCEEEEECTTCCCHHHHHH
T ss_pred CChHHHHHHHHHHHHcCCcEEEEEeCC---------------CChHHHHHHHHHHHHHcCCCCEEEEcccCCCCHHHHHH
Confidence 4566666665544 5699999997652 134455677888898874 455555555789999999
Q ss_pred HHHHHHHc---CCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhh
Q psy4398 188 LCKRLEAC---GIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLN 250 (306)
Q Consensus 188 ~a~~l~~~---G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~ 250 (306)
+++.+++. ++.+|- ++. .+.+++..+++++.+++||.+-=.+.+..+++++++.+
T Consensus 180 ~~~~l~~~~~~~i~~iE-------qP~-~~~d~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~ 237 (332)
T 2ozt_A 180 WFAWLDRHGNGKIEYVE-------QPL-PPDQWQALLSLAQTVTTAIALDESVVSAAEVQRWVDRG 237 (332)
T ss_dssp HHHHHHHHCCTTEEEEE-------CCS-CTTCHHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHTT
T ss_pred HHHHHHhhccCCcceeE-------CCC-CCCCHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhC
Confidence 99999998 655542 222 24588999999999999999888899999999988763
No 303
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=96.32 E-value=0.024 Score=48.47 Aligned_cols=74 Identities=18% Similarity=0.249 Sum_probs=63.2
Q ss_pred ccEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHh
Q psy4398 170 IPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSL 249 (306)
Q Consensus 170 ~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~ 249 (306)
.|+..=+|. .+.++...+++.+.+.|++.|-++-++ |..++.++++++.+.-++|+.|-|.|.++++.+++.
T Consensus 13 ~~vi~Vir~-~~~~~a~~~a~al~~gGi~~iEvt~~t-------~~a~~~I~~l~~~~p~~~IGAGTVlt~~~a~~ai~A 84 (217)
T 3lab_A 13 KPLIPVIVI-DDLVHAIPMAKALVAGGVHLLEVTLRT-------EAGLAAISAIKKAVPEAIVGAGTVCTADDFQKAIDA 84 (217)
T ss_dssp CSEEEEECC-SCGGGHHHHHHHHHHTTCCEEEEETTS-------TTHHHHHHHHHHHCTTSEEEEECCCSHHHHHHHHHH
T ss_pred CCEEEEEEc-CCHHHHHHHHHHHHHcCCCEEEEeCCC-------ccHHHHHHHHHHHCCCCeEeeccccCHHHHHHHHHc
Confidence 466655663 567889999999999999999997654 457899999999997789999999999999999998
Q ss_pred hh
Q psy4398 250 NC 251 (306)
Q Consensus 250 ~v 251 (306)
|+
T Consensus 85 GA 86 (217)
T 3lab_A 85 GA 86 (217)
T ss_dssp TC
T ss_pred CC
Confidence 65
No 304
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=96.29 E-value=0.038 Score=47.40 Aligned_cols=126 Identities=12% Similarity=0.050 Sum_probs=82.6
Q ss_pred CCCceEEEecCCC----HH--HHHHHHHHHhc-CCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccE
Q psy4398 100 EKNKIILQIGTAD----PE--RALEAAKKVEH-DVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPV 172 (306)
Q Consensus 100 ~~~p~ivql~g~~----~~--~~~~aa~~~~~-g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv 172 (306)
.+.++++|..... ++ +..+.++.+.+ |+++|.++ .+ +.++.+++.+++|+
T Consensus 16 ~~~~~~~~~~~~~p~~~~~~~~~~~~a~~~~~~G~~~i~~~-------------------~~----~~i~~i~~~~~~p~ 72 (234)
T 1yxy_A 16 GGIIVSCQALPGEPLYSETGGIMPLMAKAAQEAGAVGIRAN-------------------SV----RDIKEIQAITDLPI 72 (234)
T ss_dssp TSCEEECCCCTTSTTCCTTCCSHHHHHHHHHHHTCSEEEEE-------------------SH----HHHHHHHTTCCSCE
T ss_pred CCEEEEeeCCCCCCCcCCccchHHHHHHHHHHCCCcEeecC-------------------CH----HHHHHHHHhCCCCE
Confidence 4556677765543 56 77778887764 99999885 12 34778888889998
Q ss_pred EEEeccC-----CChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhC-CCcEEEecCCCCHHHHHHH
Q psy4398 173 SCKIRVF-----HNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHL-KIPVIANGGSKEIVDYGGV 246 (306)
Q Consensus 173 ~vKir~g-----~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~-~ipvia~GGI~s~~~~~~~ 246 (306)
..-++.+ .......+.++.+.++|+|.|+++....... .+....+.++.+++.+ +++++. ++.+.+++..+
T Consensus 73 i~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~V~l~~~~~~~~-~~~~~~~~i~~i~~~~~~~~v~~--~~~t~~ea~~a 149 (234)
T 1yxy_A 73 IGIIKKDYPPQEPFITATMTEVDQLAALNIAVIAMDCTKRDRH-DGLDIASFIRQVKEKYPNQLLMA--DISTFDEGLVA 149 (234)
T ss_dssp EEECBCCCTTSCCCBSCSHHHHHHHHTTTCSEEEEECCSSCCT-TCCCHHHHHHHHHHHCTTCEEEE--ECSSHHHHHHH
T ss_pred EeeEcCCCCccccccCChHHHHHHHHHcCCCEEEEcccccCCC-CCccHHHHHHHHHHhCCCCeEEE--eCCCHHHHHHH
Confidence 4222211 1112245667788899999999986532211 0112357889999887 666554 67789998888
Q ss_pred HHhhh
Q psy4398 247 FSLNC 251 (306)
Q Consensus 247 l~~~v 251 (306)
.+.++
T Consensus 150 ~~~Ga 154 (234)
T 1yxy_A 150 HQAGI 154 (234)
T ss_dssp HHTTC
T ss_pred HHcCC
Confidence 87765
No 305
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=96.24 E-value=0.08 Score=50.72 Aligned_cols=63 Identities=16% Similarity=0.189 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhC-CCcEEEecCCCCHHHHHHHHHhhh
Q psy4398 184 DTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHL-KIPVIANGGSKEIVDYGGVFSLNC 251 (306)
Q Consensus 184 ~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~-~ipvia~GGI~s~~~~~~~l~~~v 251 (306)
...+.++.+.++|+|.|.++... ... ...++.+.++++.+ ++|++ .|+|.+.+++..+++.|+
T Consensus 233 ~~~~~a~~l~~~G~d~ivi~~a~---g~~-~~~~~~i~~l~~~~p~~pvi-~G~v~t~~~a~~~~~~Ga 296 (491)
T 1zfj_A 233 DTFERAEALFEAGADAIVIDTAH---GHS-AGVLRKIAEIRAHFPNRTLI-AGNIATAEGARALYDAGV 296 (491)
T ss_dssp THHHHHHHHHHHTCSEEEECCSC---TTC-HHHHHHHHHHHHHCSSSCEE-EEEECSHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHcCCCeEEEeeec---Ccc-hhHHHHHHHHHHHCCCCcEe-CCCccCHHHHHHHHHcCC
Confidence 35677888999999999998621 121 12578899999998 89999 899999999999998765
No 306
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=96.24 E-value=0.054 Score=48.46 Aligned_cols=119 Identities=17% Similarity=0.133 Sum_probs=80.7
Q ss_pred CCHHHHHHHHHHH-hcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEeccCCChHHHHHHH
Q psy4398 111 ADPERALEAAKKV-EHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFHNEADTIALC 189 (306)
Q Consensus 111 ~~~~~~~~aa~~~-~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~a 189 (306)
-|.+.+.+..+.+ +.|.|+|-++-+. |-...-..+.-.++++.+.+.++. |.+-+.. .+..++++++
T Consensus 17 iD~~~l~~lv~~li~~Gv~gl~~~Gtt----------GE~~~Ls~eEr~~v~~~~~~~~~g-viaGvg~-~~t~~ai~la 84 (293)
T 1w3i_A 17 IDKEKLKIHAENLIRKGIDKLFVNGTT----------GLGPSLSPEEKLENLKAVYDVTNK-IIFQVGG-LNLDDAIRLA 84 (293)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSTT----------TTGGGSCHHHHHHHHHHHHTTCSC-EEEECCC-SCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccc----------cChhhCCHHHHHHHHHHHHHHcCC-EEEecCC-CCHHHHHHHH
Confidence 4567777777755 4599999986332 222223455557788888877754 6666652 4678899999
Q ss_pred HHHHHcCCcEEEEcccCCCCCCCC-CC---cHHHHHHHHhhCCCcEEE-e----cCC-CCHHHHHH
Q psy4398 190 KRLEACGIIAIGVHGRTKAERPRH-RN---RIEMIRTLTQHLKIPVIA-N----GGS-KEIVDYGG 245 (306)
Q Consensus 190 ~~l~~~G~d~i~v~~~~~~~~~~~-p~---~~~~v~~i~~~~~ipvia-~----GGI-~s~~~~~~ 245 (306)
+.+++.|+|++.+.... |.. |. -+++.++|.+++++||+. | .|+ -+++.+.+
T Consensus 85 ~~A~~~Gadavlv~~P~----y~~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~ 146 (293)
T 1w3i_A 85 KLSKDFDIVGIASYAPY----YYPRMSEKHLVKYFKTLCEVSPHPVYLYNYPTATGKDIDAKVAKE 146 (293)
T ss_dssp HHGGGSCCSEEEEECCC----SCSSCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHH
T ss_pred HHHHhcCCCEEEEcCCC----CCCCCCHHHHHHHHHHHHhhCCCCEEEEECchhhCcCCCHHHHHh
Confidence 99999999999876432 222 22 256778899999999876 3 343 46776655
No 307
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=96.20 E-value=0.22 Score=44.60 Aligned_cols=186 Identities=11% Similarity=0.037 Sum_probs=97.9
Q ss_pred CCceEEccCCCCCCHHHHHHHHHcCCCEEEecceechhhhhhhhhhhcccccccccCCCCCceeeecCCCCCCceEEEec
Q psy4398 30 SNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDGSVVFRTCPREKNKIILQIG 109 (306)
Q Consensus 30 ~n~i~lAPm~~~t~~~~r~~~~~~G~g~~~te~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~ivql~ 109 (306)
++..+..|.+ -|.....++.+.|+..+++...+... ..+.+. .+.++-.+.++- -+.+. ...+.|+++-+=
T Consensus 17 ~~~~i~~~~a--~D~~sA~~~~~aG~~ai~vsg~~~a~-~lG~pD-~~~vt~~em~~~--~~~I~---~~~~~PviaD~d 87 (295)
T 1s2w_A 17 SKDLEFIMEA--HNGLSARIVQEAGFKGIWGSGLSVSA-QLGVRD-SNEASWTQVVEV--LEFMS---DASDVPILLDAD 87 (295)
T ss_dssp SSSCEEEEEE--CSHHHHHHHHHHTCSCEEECCHHHHH-TC----------CHHHHHH--HHHHH---HTCSSCEEEECC
T ss_pred CCCcEEEecC--CCHHHHHHHHHcCCCEEEeChHHHHH-hCCCCC-CCCCCHHHHHHH--HHHHH---hcCCCCEEecCC
Confidence 3334444443 56666667778899777776322111 111110 011110000000 00111 123568888763
Q ss_pred -C-CCHHHHHHHHHHHh-cCCCEEEEccCCCccccccCCcc---ccccCChHHHHHHHHHHHhcc-ccc--EEEEecc--
Q psy4398 110 -T-ADPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMG---AALLSTPDIACNILTTLISNL-SIP--VSCKIRV-- 178 (306)
Q Consensus 110 -g-~~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G---~~l~~~~~~~~eiv~~v~~~~-~~p--v~vKir~-- 178 (306)
| .++++..+.++++. .|+++|.|.=+...+ +.+..| ..+. ..+...+-|++++++. +.+ |..|.-.
T Consensus 88 ~Gyg~~~~v~~~v~~l~~aGaagv~iED~~~~k--~cgH~gg~~k~l~-p~~e~~~rI~Aa~~a~~~~~~~i~aRtda~~ 164 (295)
T 1s2w_A 88 TGYGNFNNARRLVRKLEDRGVAGACLEDKLFPK--TNSLHDGRAQPLA-DIEEFALKIKACKDSQTDPDFCIVARVEAFI 164 (295)
T ss_dssp SSCSSHHHHHHHHHHHHHTTCCEEEEECBCC----------CTTCCBC-CHHHHHHHHHHHHHHCSSTTCEEEEEECTTT
T ss_pred CCCCCHHHHHHHHHHHHHcCCcEEEECCCCCCc--cccccCCCCCccc-CHHHHHHHHHHHHHhcccCCcEEEEeehHHh
Confidence 2 35777777777665 599999997553211 111222 1222 2333344444554433 333 4444332
Q ss_pred -CCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCC--CcEEEec
Q psy4398 179 -FHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLK--IPVIANG 235 (306)
Q Consensus 179 -g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~--ipvia~G 235 (306)
+...+++++=+++++++|+|.|.+.+.. .+.+.++++.+.++ +|++++-
T Consensus 165 a~~g~~~ai~Ra~ay~eAGAd~i~~e~~~--------~~~~~~~~i~~~~~~~~P~i~~~ 216 (295)
T 1s2w_A 165 AGWGLDEALKRAEAYRNAGADAILMHSKK--------ADPSDIEAFMKAWNNQGPVVIVP 216 (295)
T ss_dssp TTCCHHHHHHHHHHHHHTTCSEEEECCCS--------SSSHHHHHHHHHHTTCSCEEECC
T ss_pred ccccHHHHHHHHHHHHHcCCCEEEEcCCC--------CCHHHHHHHHHHcCCCCCEEEeC
Confidence 1235788999999999999999997421 24578899999987 9999983
No 308
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=96.20 E-value=0.13 Score=47.22 Aligned_cols=203 Identities=12% Similarity=0.113 Sum_probs=118.2
Q ss_pred cccccccc---CCceEEccCCC--CCCHH----HHHHHHHcCCCEEEecceechhhhhhhh--hh--h------cccccc
Q psy4398 22 ANQANINY---SNKIILAPMVR--MNTLP----FRLLALDYGADLVYSEELVDHKLVKTER--KV--N------DLLNTI 82 (306)
Q Consensus 22 ~~~~~l~l---~n~i~lAPm~~--~t~~~----~r~~~~~~G~g~~~te~~~~~~~~~~~~--~~--~------~~l~~~ 82 (306)
+++++..+ .+++++|.++. ..+.. +...++++|+..+=-.+..++.+....- .. + .++...
T Consensus 7 i~i~~~~iG~~~~~~iIAe~g~NH~gs~e~a~~li~~ak~aGadavKfq~~k~~tl~s~~~~~fq~~~~~~~~y~~~~~~ 86 (349)
T 2wqp_A 7 FKIGNRSVGYNHEPLIICEIGINHEGSLKTAFEMVDAAYNAGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIMERC 86 (349)
T ss_dssp EEETTEEEETTSCCEEEEEEETTTTTCHHHHHHHHHHHHHHTCSEEEEEECCHHHHCCGGGGGCCCTTCSSCHHHHHHHH
T ss_pred EEECCEEECCCCceEEEEecCCcccCCHHHHHHHHHHHHHhCCCEEeeeecccccccCcchhccccCCCCccHHHHHHHh
Confidence 44555544 34788887763 44443 2334678899876554444433210000 00 0 000000
Q ss_pred cccCCCCCceeeecCCCCCCceEEEecCCCHHHHHHHHHHHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHH
Q psy4398 83 DFVDPLDGSVVFRTCPREKNKIILQIGTADPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNIL 161 (306)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~p~ivql~g~~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv 161 (306)
++.. ..++.+.+.+.+.|.+++-..+-.. .++.+. .++|.+.| |+.-+++..++.++.
T Consensus 87 ~l~~-e~~~~L~~~~~~~Gi~~~st~~d~~------svd~l~~~~v~~~KI--------------~S~~~~n~~LL~~va 145 (349)
T 2wqp_A 87 ALNE-EDEIKLKEYVESKGMIFISTLFSRA------AALRLQRMDIPAYKI--------------GSGECNNYPLIKLVA 145 (349)
T ss_dssp CCCH-HHHHHHHHHHHHTTCEEEEEECSHH------HHHHHHHHTCSCEEE--------------CGGGTTCHHHHHHHH
T ss_pred CCCH-HHHHHHHHHHHHhCCeEEEeeCCHH------HHHHHHhcCCCEEEE--------------CcccccCHHHHHHHH
Confidence 0100 0023344555556666666664321 122233 36777777 444556766655543
Q ss_pred HHHHhcccccEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhC-CCcEEEecCCCCH
Q psy4398 162 TTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHL-KIPVIANGGSKEI 240 (306)
Q Consensus 162 ~~v~~~~~~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~-~ipvia~GGI~s~ 240 (306)
..+.||.+|.... +.+++...++.+.+.|.+.+.+|+.+.-.......|+..+..+++.+ ++||..++--..+
T Consensus 146 -----~~gkPviLstGma-t~~Ei~~Ave~i~~~G~~iiLlhc~s~Yp~~~~~~nL~ai~~lk~~f~~lpVg~sdHt~G~ 219 (349)
T 2wqp_A 146 -----SFGKPIILSTGMN-SIESIKKSVEIIREAGVPYALLHCTNIYPTPYEDVRLGGMNDLSEAFPDAIIGLSDHTLDN 219 (349)
T ss_dssp -----TTCSCEEEECTTC-CHHHHHHHHHHHHHHTCCEEEEECCCCSSCCGGGCCTHHHHHHHHHCTTSEEEEECCSSSS
T ss_pred -----hcCCeEEEECCCC-CHHHHHHHHHHHHHcCCCEEEEeccCCCCCChhhcCHHHHHHHHHHCCCCCEEeCCCCCcH
Confidence 2589999999975 88899999999999999888888765433333346899999999999 9999876543335
Q ss_pred HHHHHHHHhhh
Q psy4398 241 VDYGGVFSLNC 251 (306)
Q Consensus 241 ~~~~~~l~~~v 251 (306)
.-...++..|+
T Consensus 220 ~~~~AAvAlGA 230 (349)
T 2wqp_A 220 YACLGAVALGG 230 (349)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHhCC
Confidence 55555555554
No 309
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=96.19 E-value=0.049 Score=49.20 Aligned_cols=122 Identities=10% Similarity=0.068 Sum_probs=81.6
Q ss_pred CHHHHHHHHHHH-hcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEeccCCChHHHHHH
Q psy4398 112 DPERALEAAKKV-EHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIRVFHNEADTIAL 188 (306)
Q Consensus 112 ~~~~~~~aa~~~-~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~~ 188 (306)
|.+.+.+..+.+ +.|.|+|-++.+. |-...-..+.-.++++.+.+.+ .+||.+-+.. .+..+++++
T Consensus 26 D~~~l~~lv~~li~~Gv~Gl~v~GtT----------GE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg~-~~t~~ai~l 94 (311)
T 3h5d_A 26 NFDAIPALIEHLLAHHTDGILLAGTT----------AESPTLTHDEELELFAAVQKVVNGRVPLIAGVGT-NDTRDSIEF 94 (311)
T ss_dssp CTTHHHHHHHHHHHTTCCCEEESSTT----------TTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECCC-SSHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccc----------cChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCC-cCHHHHHHH
Confidence 446677777755 4599999996443 2222223444566777776665 4788887763 467889999
Q ss_pred HHHHHHcCC-cEEEEcccCCCCCCCCCC---cHHHHHHHHhhCCCcEEEe------cCCCCHHHHHHHHH
Q psy4398 189 CKRLEACGI-IAIGVHGRTKAERPRHRN---RIEMIRTLTQHLKIPVIAN------GGSKEIVDYGGVFS 248 (306)
Q Consensus 189 a~~l~~~G~-d~i~v~~~~~~~~~~~p~---~~~~v~~i~~~~~ipvia~------GGI~s~~~~~~~l~ 248 (306)
++.+++.|+ |++.+.... |..|. -.++.++|.+++++||+.= |---+++.+.++.+
T Consensus 95 a~~A~~~Ga~davlv~~P~----y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 160 (311)
T 3h5d_A 95 VKEVAEFGGFAAGLAIVPY----YNKPSQEGMYQHFKAIADASDLPIIIYNIPGRVVVELTPETMLRLAD 160 (311)
T ss_dssp HHHHHHSCCCSEEEEECCC----SSCCCHHHHHHHHHHHHHSCSSCEEEEECHHHHSSCCCHHHHHHHHT
T ss_pred HHHHHhcCCCcEEEEcCCC----CCCCCHHHHHHHHHHHHHhCCCCEEEEecccccCCCCCHHHHHHHhc
Confidence 999999997 999876432 22221 3567788888889998753 33346776666554
No 310
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=96.07 E-value=0.031 Score=48.86 Aligned_cols=71 Identities=14% Similarity=0.199 Sum_probs=45.3
Q ss_pred cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEecc-C----CChHH---HHHHHHHHHHcC
Q psy4398 125 HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRV-F----HNEAD---TIALCKRLEACG 196 (306)
Q Consensus 125 ~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~-g----~~~~~---~~~~a~~l~~~G 196 (306)
.|+|.|||+-+-. -||. .|. ..+++.+++.+++||.|=+|+ + .+.++ ..+-++.+.++|
T Consensus 20 ~GAdRIELc~~L~--------~GGl---TPS--~g~i~~~~~~~~ipv~vMIRPR~GdF~Ys~~E~~~M~~Di~~~~~~G 86 (256)
T 1twd_A 20 NGADRVELCAAPK--------EGGL---TPS--LGVLKSVRQRVTIPVHPIIRPRGGDFCYSDGEFAAILEDVRTVRELG 86 (256)
T ss_dssp TTCSEEEECBCGG--------GTCB---CCC--HHHHHHHHHHCCSCEEEBCCSSSSCSCCCHHHHHHHHHHHHHHHHTT
T ss_pred cCCCEEEEcCCcc--------cCCC---CCC--HHHHHHHHHHcCCceEEEECCCCCCCcCCHHHHHHHHHHHHHHHHcC
Confidence 5999999963211 1111 111 223556677788999999987 2 23333 566677888999
Q ss_pred CcEEEEcccCCC
Q psy4398 197 IIAIGVHGRTKA 208 (306)
Q Consensus 197 ~d~i~v~~~~~~ 208 (306)
+|++++-.-+.+
T Consensus 87 adGvV~G~Lt~d 98 (256)
T 1twd_A 87 FPGLVTGVLDVD 98 (256)
T ss_dssp CSEEEECCBCTT
T ss_pred CCEEEEeeECCC
Confidence 999998655443
No 311
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=96.02 E-value=0.018 Score=48.32 Aligned_cols=71 Identities=18% Similarity=0.103 Sum_probs=55.2
Q ss_pred ChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhh---hhcccc
Q psy4398 181 NEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNC---AFLRNH 257 (306)
Q Consensus 181 ~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v---~vGral 257 (306)
|......-.+.+.+...|++-+-+. + .-+.++++++.+++|||+.|+|+|.+++++++++|+ ..++.-
T Consensus 112 DS~al~~~~~~i~~~~PD~iEiLPG--------i-~p~iI~~i~~~~~~PiIaGGlI~~~edv~~al~aGA~aVsTs~~~ 182 (192)
T 3kts_A 112 DSSAYNKGVALIQKVQPDCIELLPG--------I-IPEQVQKMTQKLHIPVIAGGLIETSEQVNQVIASGAIAVTTSNKH 182 (192)
T ss_dssp SHHHHHHHHHHHHHHCCSEEEEECT--------T-CHHHHHHHHHHHCCCEEEESSCCSHHHHHHHHTTTEEEEEECCGG
T ss_pred EcchHHHHHHHHhhcCCCEEEECCc--------h-hHHHHHHHHHhcCCCEEEECCcCCHHHHHHHHHcCCeEEEeCCHH
Confidence 4344566677778888898876421 2 237899999999999999999999999999999976 666666
Q ss_pred CCC
Q psy4398 258 YPV 260 (306)
Q Consensus 258 l~~ 260 (306)
+|+
T Consensus 183 LW~ 185 (192)
T 3kts_A 183 LWE 185 (192)
T ss_dssp GGT
T ss_pred HhC
Confidence 664
No 312
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=96.01 E-value=0.22 Score=44.76 Aligned_cols=123 Identities=12% Similarity=0.062 Sum_probs=74.6
Q ss_pred CCceEEEec-C-CCHHHHHHHHHHHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhc---ccccEEE
Q psy4398 101 KNKIILQIG-T-ADPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISN---LSIPVSC 174 (306)
Q Consensus 101 ~~p~ivql~-g-~~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~---~~~pv~v 174 (306)
..|+++-+- | .++++..+.++.+. .|+.+|.|.=....+ +.+..++.-.-..+...+-|++.+++ .+.++.+
T Consensus 88 ~~PviaD~d~Gyg~~~~v~~~v~~l~~aGaagv~iEDq~~~k--~cgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I 165 (307)
T 3lye_A 88 GPPLIADMDTGYGGPIMVARTVEHYIRSGVAGAHLEDQILTK--RCGHLSGKKVVSRDEYLVRIRAAVATKRRLRSDFVL 165 (307)
T ss_dssp SCCEEEECTTCSSSHHHHHHHHHHHHHTTCCEEEECCBCCCC----------CBCCHHHHHHHHHHHHHHHHHTTCCCEE
T ss_pred CCcEEEECCCCCCCHHHHHHHHHHHHHcCCeEEEEcCCCCCc--ccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEE
Confidence 368888873 2 36778778777765 599999996443111 11111222122333333333444433 2445555
Q ss_pred EeccC----CChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCC-CcEEEe
Q psy4398 175 KIRVF----HNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLK-IPVIAN 234 (306)
Q Consensus 175 Kir~g----~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~-ipvia~ 234 (306)
--|.. ...+++++=++.+.++|+|.|-+++. .+.+.++++.+.++ +|+.+|
T Consensus 166 ~ARTDa~~~~gldeAi~Ra~ay~eAGAD~ifi~~~---------~~~~~~~~i~~~~~~~Pv~~n 221 (307)
T 3lye_A 166 IARTDALQSLGYEECIERLRAARDEGADVGLLEGF---------RSKEQAAAAVAALAPWPLLLN 221 (307)
T ss_dssp EEEECCHHHHCHHHHHHHHHHHHHTTCSEEEECCC---------SCHHHHHHHHHHHTTSCBEEE
T ss_pred EEechhhhccCHHHHHHHHHHHHHCCCCEEEecCC---------CCHHHHHHHHHHccCCceeEE
Confidence 54531 24567888899999999999998763 25678889998884 898765
No 313
>3vdg_A Probable glucarate dehydratase; enolase, magnesium binding site, lyase; 1.90A {Mycobacterium smegmatis str} PDB: 3vfc_A*
Probab=95.98 E-value=0.072 Score=50.58 Aligned_cols=113 Identities=12% Similarity=0.220 Sum_probs=87.5
Q ss_pred CCHHHHHHHHHHH-hc-CCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc-cccEEEEeccCCChHHHHH
Q psy4398 111 ADPERALEAAKKV-EH-DVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL-SIPVSCKIRVFHNEADTIA 187 (306)
Q Consensus 111 ~~~~~~~~aa~~~-~~-g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~g~~~~~~~~ 187 (306)
.+++++++.|+.+ ++ ||..+-+..|.. +++.-.+.++++|+++ ++++.+-...+|+.+++++
T Consensus 192 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~---------------~~~~Di~~v~avRea~~d~~L~vDaN~~w~~~~Ai~ 256 (445)
T 3vdg_A 192 LDPDGIVAQARRMIDEYGFSAIKLKGGVF---------------APEEEMAAVEALRAAFPDHPLRLDPNAAWTPQTSVK 256 (445)
T ss_dssp CSHHHHHHHHHHHHHHHCCSSEEEECSSS---------------CHHHHHHHHHHHHHHCTTSCEEEECTTCSCHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEECCCCC---------------CHHHHHHHHHHHHHhCCCCcEEEECCCCCCHHHHHH
Confidence 5788888877755 44 999999976531 2334456778888877 4567777766899999999
Q ss_pred HHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHh
Q psy4398 188 LCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSL 249 (306)
Q Consensus 188 ~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~ 249 (306)
+++.+++. +.+|- ++. + +++..+++++.+++||.+.-.+.+..++.++++.
T Consensus 257 ~~~~L~~~-l~~iE-------eP~--~-~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~ 307 (445)
T 3vdg_A 257 VAAGLEGV-LEYLE-------DPT--P-GLDGMAEVAAQAPMPLATNMCVVAFDQLPAAVAK 307 (445)
T ss_dssp HHHHTTTT-CSEEE-------CCS--S-SHHHHHHHHHHCSSCEEESSSCCSGGGHHHHHHH
T ss_pred HHHHHhhH-HHeee-------CCC--C-CHHHHHHHHhcCCCCEEcCCcCCCHHHHHHHHHc
Confidence 99999988 77663 222 2 6888999999999999888788999999988875
No 314
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=95.92 E-value=0.031 Score=51.65 Aligned_cols=89 Identities=19% Similarity=0.196 Sum_probs=67.3
Q ss_pred ChHHHHHHHHHHHhcccccEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEE
Q psy4398 153 TPDIACNILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVI 232 (306)
Q Consensus 153 ~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvi 232 (306)
.++...+.++.+++....|+.+-+.. +. .+.++.+.++|+|.|+++.... .. ...++.++++++.+++|||
T Consensus 79 s~e~~~~~I~~vk~~~~~pvga~ig~--~~---~e~a~~l~eaGad~I~ld~a~G---~~-~~~~~~i~~i~~~~~~~Vi 149 (361)
T 3khj_A 79 DMESQVNEVLKVKNSGGLRVGAAIGV--NE---IERAKLLVEAGVDVIVLDSAHG---HS-LNIIRTLKEIKSKMNIDVI 149 (361)
T ss_dssp CHHHHHHHHHHHHHTTCCCCEEEECT--TC---HHHHHHHHHTTCSEEEECCSCC---SB-HHHHHHHHHHHHHCCCEEE
T ss_pred CHHHHHHHHHHHHhccCceEEEEeCC--CH---HHHHHHHHHcCcCeEEEeCCCC---Cc-HHHHHHHHHHHHhcCCcEE
Confidence 46677788899988777888888763 22 6788889999999999863321 11 1235788899998899998
Q ss_pred EecCCCCHHHHHHHHHhhh
Q psy4398 233 ANGGSKEIVDYGGVFSLNC 251 (306)
Q Consensus 233 a~GGI~s~~~~~~~l~~~v 251 (306)
+ |++.+.+.++.+.+.|+
T Consensus 150 v-g~v~t~e~A~~l~~aGa 167 (361)
T 3khj_A 150 V-GNVVTEEATKELIENGA 167 (361)
T ss_dssp E-EEECSHHHHHHHHHTTC
T ss_pred E-ccCCCHHHHHHHHHcCc
Confidence 7 56789999999998865
No 315
>3va8_A Probable dehydratase; enolase, magnesium binding site, lyase; 2.00A {Gibberella zeae}
Probab=95.90 E-value=0.068 Score=50.73 Aligned_cols=113 Identities=17% Similarity=0.234 Sum_probs=87.5
Q ss_pred CCHHHHHHHHHHH-hc-CCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc-cccEEEEeccCCChHHHHH
Q psy4398 111 ADPERALEAAKKV-EH-DVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL-SIPVSCKIRVFHNEADTIA 187 (306)
Q Consensus 111 ~~~~~~~~aa~~~-~~-g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~g~~~~~~~~ 187 (306)
.+++++++.|+.+ ++ ||..+-+..|.. +++.-.+.++++|+++ +.++.+-...+|+.+++++
T Consensus 190 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~---------------~~~~Di~~v~avRea~~~~~L~vDaN~~w~~~~Ai~ 254 (445)
T 3va8_A 190 LDPEGVVKQAKKIIDEYGFKAIKLKGGVF---------------PPADEVAAIKALHKAFPGVPLRLDPNAAWTVETSKW 254 (445)
T ss_dssp CSHHHHHHHHHHHHHHHCCSCEEEECSSS---------------CHHHHHHHHHHHHHHSTTCCEEEECTTCBCHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEccCCC---------------CHHHHHHHHHHHHHhCCCCcEeeeCCCCCCHHHHHH
Confidence 5788888877755 44 999999976532 2344456788888877 4567776666899999999
Q ss_pred HHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHh
Q psy4398 188 LCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSL 249 (306)
Q Consensus 188 ~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~ 249 (306)
+++.+++. +.+|- ++. .+++..+++++.+++||.+.-.+.+..++.++++.
T Consensus 255 ~~~~L~~~-l~~iE-------eP~---~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~ 305 (445)
T 3va8_A 255 VAKELEGI-VEYLE-------DPA---GEIEGMAAVAKEASMPLATNMAVVAFDHLPPSILQ 305 (445)
T ss_dssp HHHHTTTT-CSEEE-------SCB---SHHHHHHHHHTTCSSCEEESSSCCSGGGHHHHHHT
T ss_pred HHHHHhhh-cCeEe-------ecC---cCHHHHHHHHHcCCCCEEeCCccCCHHHHHHHHHc
Confidence 99999988 77663 222 27888899999999999888788999999998875
No 316
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=95.86 E-value=0.26 Score=44.20 Aligned_cols=149 Identities=15% Similarity=0.132 Sum_probs=83.4
Q ss_pred CCceEEEecCCC-HHHHHHHHHHHhc-CCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEecc
Q psy4398 101 KNKIILQIGTAD-PERALEAAKKVEH-DVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRV 178 (306)
Q Consensus 101 ~~p~ivql~g~~-~~~~~~aa~~~~~-g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~ 178 (306)
+.++++-+--.| ++....+++.+.. |+|.+.+|... + ++.+...++..++.-..|..+-+..
T Consensus 76 g~~IflDlKl~DIpnTv~~av~~~a~lGaD~vTVHa~~-----------G-----~~~m~aa~e~a~~~~~~~~llaVtv 139 (303)
T 3ru6_A 76 DFKIFLDLKFHDIPNTMADACEEVSKLGVDMINIHASA-----------G-----KIAIQEVMTRLSKFSKRPLVLAVSA 139 (303)
T ss_dssp CCEEEEEEEECSCHHHHHHHHHHHHTTTCSEEEEEGGG-----------C-----HHHHHHHHHHHTTSSSCCEEEEECS
T ss_pred CCCEEEEeeeccCchhHHHHHHHHHhcCCCEEEEeccC-----------C-----HHHHHHHHHHHHhcCCCceEEEEEE
Confidence 456777765343 4444455555554 99999998432 1 3444455555543322233322211
Q ss_pred --CCCh------------HHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCC-CcEEEecCCCCH---
Q psy4398 179 --FHNE------------ADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLK-IPVIANGGSKEI--- 240 (306)
Q Consensus 179 --g~~~------------~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~-ipvia~GGI~s~--- 240 (306)
..+. +...++|+...++|++++++++. . +..|++.++ -.++.++||+-.
T Consensus 140 LTS~s~~~l~~l~~~~~~e~V~~lA~~a~~~G~dGvV~s~~----------E---~~~IR~~~~~~fl~VTPGIr~qG~~ 206 (303)
T 3ru6_A 140 LTSFDEENFFSIYRQKIEEAVINFSKISYENGLDGMVCSVF----------E---SKKIKEHTSSNFLTLTPGIRPFGET 206 (303)
T ss_dssp CTTCCHHHHHHHHSSCHHHHHHHHHHHHHHTTCSEEECCTT----------T---HHHHHHHSCTTSEEEECCCCTTC--
T ss_pred ecCCCHHHHHHHHcCCHHHHHHHHHHHHHHcCCCEEEECHH----------H---HHHHHHhCCCccEEECCCcCcccCC
Confidence 1221 22456888888999999987421 1 467788773 467889999821
Q ss_pred -------HHHHHHHHhhh---hhccccCCCCCc--hHHHHHHHHHhcCCC
Q psy4398 241 -------VDYGGVFSLNC---AFLRNHYPVEKL--PKTILYAHCKYKRFE 278 (306)
Q Consensus 241 -------~~~~~~l~~~v---~vGrall~~p~~--~~~~l~~~~~~~g~~ 278 (306)
.+..++++.|+ .+||+++..+.. .-..+.+-++++++.
T Consensus 207 ~~DQ~Rv~t~~~a~~aGAd~iVvGr~I~~a~dp~~a~~~i~~~i~~~~~~ 256 (303)
T 3ru6_A 207 NDDQKRVANLAMARENLSDYIVVGRPIYKNENPRAVCEKILNKIHRKNIS 256 (303)
T ss_dssp ------CCSHHHHHHTTCSEEEECHHHHTSSCHHHHHHHHHHHHC-----
T ss_pred cccccccCCHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHHHHHHhcccc
Confidence 14556666654 999999874422 223555666665543
No 317
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=95.86 E-value=0.034 Score=47.68 Aligned_cols=136 Identities=7% Similarity=-0.065 Sum_probs=79.4
Q ss_pred CCceEEEec-CCCHHHHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEecc-
Q psy4398 101 KNKIILQIG-TADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRV- 178 (306)
Q Consensus 101 ~~p~ivql~-g~~~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~- 178 (306)
+.++++-+- +..|+.+.+++ ++.|+|.+.+|.... .+.+.+.++.+++.-..|..+-+..
T Consensus 58 ~~~iflDlKl~Dip~t~~~~~--~~~Gad~vtVH~~~g----------------~~~l~~a~~~~~~~g~~~~~~~Vt~l 119 (221)
T 3exr_A 58 DKIIVADTKCADAGGTVAKNN--AVRGADWMTCICSAT----------------IPTMKAARKAIEDINPDKGEIQVELY 119 (221)
T ss_dssp TSEEEEEEEECSCHHHHHHHH--HTTTCSEEEEETTSC----------------HHHHHHHHHHHHHHCTTTCEEEEECC
T ss_pred CCcEEEEEEeeccHHHHHHHH--HHcCCCEEEEeccCC----------------HHHHHHHHHHHHhcCCCcceEEEEEc
Confidence 346666653 45576666652 446999999986542 2335556666654311233333332
Q ss_pred -CCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCC-CCcHHHHHHHHhhC--CCcEEEecCCCCHHHHHHHHHhh---h
Q psy4398 179 -FHNEADTIALCKRLEACGIIAIGVHGRTKAERPRH-RNRIEMIRTLTQHL--KIPVIANGGSKEIVDYGGVFSLN---C 251 (306)
Q Consensus 179 -g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~-p~~~~~v~~i~~~~--~ipvia~GGI~s~~~~~~~l~~~---v 251 (306)
.++.+. ++.+.+.|++.+.++-....+ ..+ ....+-++.+++.. +++|...|||+ +++...+.++| +
T Consensus 120 ts~~~~~----~~~~~~~~~~~~v~~~a~~~~-~~Gvv~s~~e~~~ir~~~~~~~~i~v~gGI~-~~~~~~~~~aGad~~ 193 (221)
T 3exr_A 120 GDWTYDQ----AQQWLDAGISQAIYHQSRDAL-LAGETWGEKDLNKVKKLIEMGFRVSVTGGLS-VDTLKLFEGVDVFTF 193 (221)
T ss_dssp SSCCHHH----HHHHHHTTCCEEEEECCHHHH-HHTCCCCHHHHHHHHHHHHHTCEEEEESSCC-GGGGGGGTTCCCSEE
T ss_pred CCCCHHH----HHHHHcCCHHHHHHHHHHhcC-CCccccCHHHHHHHHHhhcCCceEEEECCCC-HHHHHHHHHCCCCEE
Confidence 233332 335566899988875321100 011 12234566666665 68899999995 67777777776 3
Q ss_pred hhccccCCC
Q psy4398 252 AFLRNHYPV 260 (306)
Q Consensus 252 ~vGrall~~ 260 (306)
.+||+++..
T Consensus 194 VvG~~I~~a 202 (221)
T 3exr_A 194 IAGRGITEA 202 (221)
T ss_dssp EECHHHHTS
T ss_pred EECchhhCC
Confidence 999999863
No 318
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=95.82 E-value=0.11 Score=46.09 Aligned_cols=90 Identities=13% Similarity=0.136 Sum_probs=70.1
Q ss_pred ceEEEecCCCHHHHHHHHHHHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc-cccEEEEecc--
Q psy4398 103 KIILQIGTADPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL-SIPVSCKIRV-- 178 (306)
Q Consensus 103 p~ivql~g~~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~-- 178 (306)
.+++.|.+.+.++..+.++.+. .|+|.||+- -|-+.. ..+.+.+.+.+..+|+.+ +.|+.+=+|.
T Consensus 41 ~i~v~l~~~~~~e~~~~~~~~~~~gaD~VElR---------vD~l~~--~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~ 109 (276)
T 3o1n_A 41 KIIVSLMGKTITDVKSEALAYREADFDILEWR---------VDHFAN--VTTAESVLEAAGAIREIITDKPLLFTFRSAK 109 (276)
T ss_dssp EEEEEECCSSHHHHHHHHHHHTTSCCSEEEEE---------GGGCTT--TTCHHHHHHHHHHHHHHCCSSCEEEECCBGG
T ss_pred EEEEEeCCCCHHHHHHHHHHHhhCCCCEEEEE---------eccccc--cCcHHHHHHHHHHHHHhcCCCCEEEEEEEhh
Confidence 4778999999999988888887 599999993 333321 124577889999999887 7999998886
Q ss_pred --C---CChHHHHHHHHHHHHcC-CcEEEEc
Q psy4398 179 --F---HNEADTIALCKRLEACG-IIAIGVH 203 (306)
Q Consensus 179 --g---~~~~~~~~~a~~l~~~G-~d~i~v~ 203 (306)
| .+.++..++.+.+.+.| +|+|.|-
T Consensus 110 eGG~~~~~~~~~~~ll~~~l~~g~~dyIDvE 140 (276)
T 3o1n_A 110 EGGEQALTTGQYIDLNRAAVDSGLVDMIDLE 140 (276)
T ss_dssp GTCSBCCCHHHHHHHHHHHHHHTCCSEEEEE
T ss_pred hCCCCCCCHHHHHHHHHHHHhcCCCCEEEEE
Confidence 2 13456788888888899 9999985
No 319
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=95.78 E-value=0.18 Score=45.09 Aligned_cols=114 Identities=11% Similarity=0.094 Sum_probs=72.8
Q ss_pred hcCCCEEE----EccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEE--e--ccC------CChHHHHHHH
Q psy4398 124 EHDVAAID----INMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCK--I--RVF------HNEADTIALC 189 (306)
Q Consensus 124 ~~g~d~ve----ln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vK--i--r~g------~~~~~~~~~a 189 (306)
+.|+|+|- +|.++|.. .+..+.+.+++++.. ..++|+.+- + +.| .+++.....+
T Consensus 139 rlGADaV~~l~~i~~Gs~~e-----------~~~l~~la~vv~ea~-~~GlP~~~ep~~y~r~gg~v~~~~dp~~Va~aa 206 (307)
T 3fok_A 139 DRGVDFAKTLVRINLSDAGT-----------APTLEATAHAVNEAA-AAQLPIMLEPFMSNWVNGKVVNDLSTDAVIQSV 206 (307)
T ss_dssp HHTCCEEEEEEEECTTCTTH-----------HHHHHHHHHHHHHHH-HTTCCEEEEEEEEEEETTEEEECCSHHHHHHHH
T ss_pred HCCCCEEEEEEEECCCChhH-----------HHHHHHHHHHHHHHH-HcCCcEEEEeeccccCCCCcCCCCCHHHHHHHH
Confidence 34999966 56666552 112344455555543 348887764 2 111 2455678888
Q ss_pred HHHHHcCCc----EEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCC--CHHHH----HHHHH-h---hhhhcc
Q psy4398 190 KRLEACGII----AIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSK--EIVDY----GGVFS-L---NCAFLR 255 (306)
Q Consensus 190 ~~l~~~G~d----~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~--s~~~~----~~~l~-~---~v~vGr 255 (306)
+...+.|+| .|-+. |. +.++++.+.+.+||+..||=. +.+++ +++++ . |+.+||
T Consensus 207 RiAaELGADs~~tivK~~-------y~-----e~f~~Vv~a~~vPVViaGG~k~~~~~e~L~~v~~A~~~aGa~Gv~vGR 274 (307)
T 3fok_A 207 AIAAGLGNDSSYTWMKLP-------VV-----EEMERVMESTTMPTLLLGGEGGNDPDATFASWEHALTLPGVRGLTVGR 274 (307)
T ss_dssp HHHHTCSSCCSSEEEEEE-------CC-----TTHHHHGGGCSSCEEEECCSCC--CHHHHHHHHHHTTSTTEEEEEECT
T ss_pred HHHHHhCCCcCCCEEEeC-------Cc-----HHHHHHHHhCCCCEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEeech
Confidence 999999999 87762 21 345888888899999998854 33333 45555 3 459999
Q ss_pred ccCCCC
Q psy4398 256 NHYPVE 261 (306)
Q Consensus 256 all~~p 261 (306)
.+++.|
T Consensus 275 NIfQ~~ 280 (307)
T 3fok_A 275 TLLYPQ 280 (307)
T ss_dssp TTSSCS
T ss_pred hhccCC
Confidence 999854
No 320
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=95.77 E-value=0.035 Score=49.86 Aligned_cols=84 Identities=8% Similarity=-0.005 Sum_probs=59.7
Q ss_pred HHHHHHHHHhcccc-cEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhC--CCcEEE
Q psy4398 157 ACNILTTLISNLSI-PVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHL--KIPVIA 233 (306)
Q Consensus 157 ~~eiv~~v~~~~~~-pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~--~ipvia 233 (306)
+.+-++++++..+. ++.|-+. +. +-++.+.++|+|+|-++. ...+.++++++.+ +++|.+
T Consensus 195 i~~ai~~~r~~~~~~kI~vev~---tl----ee~~eA~~aGaD~I~ld~----------~~~e~l~~~v~~~~~~~~I~A 257 (296)
T 1qap_A 195 VRQAVEKAFWLHPDVPVEVEVE---NL----DELDDALKAGADIIMLDN----------FNTDQMREAVKRVNGQARLEV 257 (296)
T ss_dssp HHHHHHHHHHHSTTSCEEEEES---SH----HHHHHHHHTTCSEEEESS----------CCHHHHHHHHHTTCTTCCEEE
T ss_pred HHHHHHHHHHhCCCCcEEEEeC---CH----HHHHHHHHcCCCEEEECC----------CCHHHHHHHHHHhCCCCeEEE
Confidence 45667777776643 4555444 22 334444678999999864 3557777777777 699999
Q ss_pred ecCCCCHHHHHHHHHhhh---hhccccC
Q psy4398 234 NGGSKEIVDYGGVFSLNC---AFLRNHY 258 (306)
Q Consensus 234 ~GGI~s~~~~~~~l~~~v---~vGrall 258 (306)
+||| +.+++.++.+.|+ .+|+..+
T Consensus 258 SGGI-t~~~i~~~a~~GvD~isvGsli~ 284 (296)
T 1qap_A 258 SGNV-TAETLREFAETGVDFISVGALTK 284 (296)
T ss_dssp CCCS-CHHHHHHHHHTTCSEEECSHHHH
T ss_pred ECCC-CHHHHHHHHHcCCCEEEEeHHHc
Confidence 9999 8999999999876 6666544
No 321
>3ijl_A Muconate cycloisomerase; enolase superfamily, dipeptide epimerase, L-Pro-D-Glu, nonpr binding; HET: DGL; 1.50A {Bacteroides thetaiotaomicron} PDB: 3iji_A* 3ijq_A*
Probab=95.71 E-value=0.097 Score=47.72 Aligned_cols=113 Identities=17% Similarity=0.290 Sum_probs=84.6
Q ss_pred ecCCCHHHHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEeccCC-ChHHHH
Q psy4398 108 IGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFH-NEADTI 186 (306)
Q Consensus 108 l~g~~~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~-~~~~~~ 186 (306)
+...+++++.+.++...+||..+-+.+|.. . -.+.++++|+.++..+.+-...+| +.++..
T Consensus 130 ~~~~~~e~~~~~a~~~~~g~~~~K~Kvg~~--------------~----d~~~v~avR~~~~~~l~vDaN~~~t~~~~A~ 191 (338)
T 3ijl_A 130 IGIDTPDVVRAKTKECAGLFNILKVKLGRD--------------N----DKEMIETIRSVTDLPIAVDANQGWKDRQYAL 191 (338)
T ss_dssp CCCCCHHHHHHHHHHHHTTCSSEEEECSSS--------------C----HHHHHHHHHTTCCCCEEEECTTCCCCHHHHH
T ss_pred EeCCCHHHHHHHHHHHHhcccEEEEecCcH--------------H----HHHHHHHHHhhcCCcEEEECcCCCCCHHHHH
Confidence 345688888887776555899999976631 1 245678889888766666666689 599999
Q ss_pred HHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHH
Q psy4398 187 ALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGV 246 (306)
Q Consensus 187 ~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~ 246 (306)
++++.+++.++.+|- ++. .+.+++..+++++.+++||.+-=.+.+..++.++
T Consensus 192 ~~~~~l~~~~i~~iE-------eP~-~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~ 243 (338)
T 3ijl_A 192 DMIHWLKEKGIVMIE-------QPM-PKEQLDDIAWVTQQSPLPVFADESLQRLGDVAAL 243 (338)
T ss_dssp HHHHHHHHTTEEEEE-------CCS-CTTCHHHHHHHHHTCSSCEEESTTCCSGGGTGGG
T ss_pred HHHHHHhhCCCCEEE-------CCC-CCCcHHHHHHHHhcCCCCEEECCCCCCHHHHHHH
Confidence 999999999876652 222 3457899999999999999887777777766554
No 322
>3qld_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, isomerase; HET: MSE; 1.85A {Alicyclobacillus acidocaldarius LAA1}
Probab=95.69 E-value=0.15 Score=47.43 Aligned_cols=121 Identities=10% Similarity=0.178 Sum_probs=88.0
Q ss_pred CceEEEecCCC-HHHHHHHHHHH-hcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc-cccEEEEecc
Q psy4398 102 NKIILQIGTAD-PERALEAAKKV-EHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL-SIPVSCKIRV 178 (306)
Q Consensus 102 ~p~ivql~g~~-~~~~~~aa~~~-~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~ 178 (306)
.|+...++..+ ++++.+.++.. ++||..+-+.++ |. .+ .+.++++|+.+ ++.+.+-...
T Consensus 138 v~~~~~~~~~~~~e~~~~~~~~~~~~G~~~~K~Kv~-~~-------------~d----~~~v~avR~~~~~~~l~vDaN~ 199 (388)
T 3qld_A 138 VEVSATLGMSESLDVLIQSVDAAVEQGFRRVKLKIA-PG-------------RD----RAAIKAVRLRYPDLAIAADANG 199 (388)
T ss_dssp EEBEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECB-TT-------------BS----HHHHHHHHHHCTTSEEEEECTT
T ss_pred EEEeEEecCCCCHHHHHHHHHHHHHhCCCeEEEEeC-cH-------------HH----HHHHHHHHHHCCCCeEEEECCC
Confidence 45666666554 88888877765 469999999864 11 23 34567777776 3445555555
Q ss_pred CCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHh
Q psy4398 179 FHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSL 249 (306)
Q Consensus 179 g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~ 249 (306)
+|+.+++.. ++.+++.++.+|- ++. .+.+++..+++++.+++||.+-=.+.+..++.++++.
T Consensus 200 ~~~~~~A~~-~~~l~~~~i~~iE-------eP~-~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~ 261 (388)
T 3qld_A 200 SYRPEDAPV-LRQLDAYDLQFIE-------QPL-PEDDWFDLAKLQASLRTPVCLDESVRSVRELKLTARL 261 (388)
T ss_dssp CCCGGGHHH-HHHGGGGCCSCEE-------CCS-CTTCHHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHH
T ss_pred CCChHHHHH-HHHHhhCCCcEEE-------CCC-CcccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHc
Confidence 788888876 7899988877663 222 3457888999999999999987788999999988875
No 323
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=95.69 E-value=0.46 Score=41.56 Aligned_cols=170 Identities=12% Similarity=0.068 Sum_probs=95.8
Q ss_pred CCCCCHHHHHHHHHcCCCEEEecceechhhhhhhhhhhcccccccccCCCCCceeeecCCCCCCceEEEec---CCCHHH
Q psy4398 39 VRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDGSVVFRTCPREKNKIILQIG---TADPER 115 (306)
Q Consensus 39 ~~~t~~~~r~~~~~~G~g~~~te~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~ivql~---g~~~~~ 115 (306)
.+.-|.....++.+.|+..+++...+... ..+.+.. ..++-.+.+.- -+.+.+. .+.|+++-+= |.++
T Consensus 25 ~~ayD~~sA~~~~~aG~dai~vg~~s~a~-~~G~pD~-~~vt~~em~~~--~~~I~r~---~~~pviaD~~~Gyg~~~-- 95 (255)
T 2qiw_A 25 PTVWDTWSAGLVEEAGFSGLTIGSHPVAD-ATGSSDG-ENMNFADYMAV--VKKITSA---VSIPVSVDVESGYGLSP-- 95 (255)
T ss_dssp CEESSHHHHHHHHHTTCSCEEECHHHHHH-HTTCCTT-TCSCHHHHHHH--HHHHHHH---CSSCEEEECTTCTTCCH--
T ss_pred ecCcCHHHHHHHHHcCCCEEEEChHHHHH-hCCCCCC-CCcCHHHHHHH--HHHHHhc---CCCCEEeccCCCcCcHH--
Confidence 34567777778888999888776321111 1111100 01100000000 0111122 2368888762 3445
Q ss_pred HHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc---cccEEEEecc-----CCC-----h
Q psy4398 116 ALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL---SIPVSCKIRV-----FHN-----E 182 (306)
Q Consensus 116 ~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~---~~pv~vKir~-----g~~-----~ 182 (306)
+..+.+.++.|+++|.|.=+... -|..+ -..+...+-|++++++. ++|+.|--|. |.+ .
T Consensus 96 ~~~~~~l~~aGa~gv~iEd~~~~-------~~k~l-~~~~e~~~~I~a~~~a~~~~g~~~~v~aRtd~~~~g~~~~~~~~ 167 (255)
T 2qiw_A 96 ADLIAQILEAGAVGINVEDVVHS-------EGKRV-REAQEHADYIAAARQAADVAGVDVVINGRTDAVKLGADVFEDPM 167 (255)
T ss_dssp HHHHHHHHHTTCCEEEECSEEGG-------GTTEE-CCHHHHHHHHHHHHHHHHHHTCCCEEEEEECHHHHCTTTSSSHH
T ss_pred HHHHHHHHHcCCcEEEECCCCCC-------CCCcc-cCHHHHHHHHHHHHHHHHhcCCCeEEEEEechhhccCCcchHHH
Confidence 44444444569999999633211 01112 24455566666665542 5774444443 211 4
Q ss_pred HHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEe
Q psy4398 183 ADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIAN 234 (306)
Q Consensus 183 ~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~ 234 (306)
+++++=++.++++|+|.|.+.+. .+.+.++++.+.+++|+-.+
T Consensus 168 ~~ai~ra~a~~eAGAd~i~~e~~---------~~~~~~~~i~~~~~~P~n~~ 210 (255)
T 2qiw_A 168 VEAIKRIKLMEQAGARSVYPVGL---------STAEQVERLVDAVSVPVNIT 210 (255)
T ss_dssp HHHHHHHHHHHHHTCSEEEECCC---------CSHHHHHHHHTTCSSCBEEE
T ss_pred HHHHHHHHHHHHcCCcEEEEcCC---------CCHHHHHHHHHhCCCCEEEE
Confidence 67888899999999999999753 35688999999999998776
No 324
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=95.67 E-value=0.021 Score=55.60 Aligned_cols=91 Identities=12% Similarity=0.066 Sum_probs=61.4
Q ss_pred HHHHHHHHcC---CcEEEEcccCCC---CCCC-CCCcHHHHHHHHhh------CCCcEEEecCCCCHHHHHHHHH-----
Q psy4398 187 ALCKRLEACG---IIAIGVHGRTKA---ERPR-HRNRIEMIRTLTQH------LKIPVIANGGSKEIVDYGGVFS----- 248 (306)
Q Consensus 187 ~~a~~l~~~G---~d~i~v~~~~~~---~~~~-~p~~~~~v~~i~~~------~~ipvia~GGI~s~~~~~~~l~----- 248 (306)
+-++.+.+.| +|+|.+...... .... .+..++.++++++. .++|+++-||| +.+++.++++
T Consensus 119 eea~~A~~~G~~~aDYv~~Gpvf~T~tK~~~~~~~~G~~~l~~i~~~~~~~~~~~iPvvAIGGI-~~~ni~~v~~~~~~~ 197 (540)
T 3nl6_A 119 EEVDELSKMGPDMVDYIGVGTLFPTLTKKNPKKAPMGTAGAIRVLDALERNNAHWCRTVGIGGL-HPDNIERVLYQCVSS 197 (540)
T ss_dssp HHHHHHHHTCC--CCEEEESCCSCCCCCC----CCCHHHHHHHHHHHHHHTTCTTCEEEEESSC-CTTTHHHHHHHCBCT
T ss_pred HHHHHHHHcCCCCCCEEEEcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHhhccCCCCEEEEcCC-CHHHHHHHHHhhccc
Confidence 3455667789 999998554321 2222 34567778777765 48999999999 6889999986
Q ss_pred ---h---hhhhccccCCCCCch--HHHHHHHHHhcCCC
Q psy4398 249 ---L---NCAFLRNHYPVEKLP--KTILYAHCKYKRFE 278 (306)
Q Consensus 249 ---~---~v~vGrall~~p~~~--~~~l~~~~~~~g~~ 278 (306)
. +++++++++..+... -..+.+.+++..+.
T Consensus 198 g~~~GadgvAVvsaI~~a~dp~~a~~~l~~~~~~~~~~ 235 (540)
T 3nl6_A 198 NGKRSLDGICVVSDIIASLDAAKSTKILRGLIDKTDYK 235 (540)
T ss_dssp TSSCBCSCEEESHHHHTCTTHHHHHHHHHHHHHCCBCC
T ss_pred ccccCceEEEEeHHHhcCCCHHHHHHHHHHHHHhCCCc
Confidence 3 569999998754322 23666667765544
No 325
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=95.66 E-value=0.12 Score=44.61 Aligned_cols=82 Identities=24% Similarity=0.158 Sum_probs=64.9
Q ss_pred HHHHHHHhcccccEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCC
Q psy4398 159 NILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSK 238 (306)
Q Consensus 159 eiv~~v~~~~~~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~ 238 (306)
++.+.+++. ++..=+|. .+.++..++++.+.+.|+..|-++-++ |..++.++++++.+.-.+++.|.|.
T Consensus 26 ~~~~~l~~~---~vv~Vir~-~~~~~a~~~a~al~~gGi~~iEvt~~t-------~~a~e~I~~l~~~~~~~~iGaGTVl 94 (232)
T 4e38_A 26 TINNQLKAL---KVIPVIAI-DNAEDIIPLGKVLAENGLPAAEITFRS-------DAAVEAIRLLRQAQPEMLIGAGTIL 94 (232)
T ss_dssp HHHHHHHHH---CEEEEECC-SSGGGHHHHHHHHHHTTCCEEEEETTS-------TTHHHHHHHHHHHCTTCEEEEECCC
T ss_pred HHHHHHHhC---CEEEEEEc-CCHHHHHHHHHHHHHCCCCEEEEeCCC-------CCHHHHHHHHHHhCCCCEEeECCcC
Confidence 355555443 44444553 467889999999999999999997654 4467999999999866899999999
Q ss_pred CHHHHHHHHHhhh
Q psy4398 239 EIVDYGGVFSLNC 251 (306)
Q Consensus 239 s~~~~~~~l~~~v 251 (306)
+.++++.+++.|+
T Consensus 95 t~~~a~~Ai~AGA 107 (232)
T 4e38_A 95 NGEQALAAKEAGA 107 (232)
T ss_dssp SHHHHHHHHHHTC
T ss_pred CHHHHHHHHHcCC
Confidence 9999999999865
No 326
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=95.66 E-value=0.12 Score=47.39 Aligned_cols=120 Identities=16% Similarity=0.141 Sum_probs=78.9
Q ss_pred CCHHHHHHHHHHH-hcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEeccCCChHHHHHHH
Q psy4398 111 ADPERALEAAKKV-EHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFHNEADTIALC 189 (306)
Q Consensus 111 ~~~~~~~~aa~~~-~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~a 189 (306)
-|.+.+.+..+.+ +.|.|+|=++.+. |-...-..+.-.++++. ...-.+||++-+.. .+..++++++
T Consensus 44 ID~~~l~~lv~~li~~Gv~Gl~v~GtT----------GE~~~Ls~eEr~~vi~~-~~~grvpViaGvg~-~st~eai~la 111 (344)
T 2hmc_A 44 PDFDALVRKGKELIADGMSAVVYCGSM----------GDWPLLTDEQRMEGVER-LVKAGIPVIVGTGA-VNTASAVAHA 111 (344)
T ss_dssp BCHHHHHHHHHHHHHTTCCCEEESSGG----------GTGGGSCHHHHHHHHHH-HHHTTCCEEEECCC-SSHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCccC----------cChhhCCHHHHHHHHHH-HhCCCCcEEEecCC-CCHHHHHHHH
Confidence 4667787777755 4599999886332 22222233333455554 11125789888763 4678899999
Q ss_pred HHHHHcCCcEEEEcccCCCCCCCC-CC---cHHHHHHHHh-hCCCcEEE-e---cCC-CCHHHHHHH
Q psy4398 190 KRLEACGIIAIGVHGRTKAERPRH-RN---RIEMIRTLTQ-HLKIPVIA-N---GGS-KEIVDYGGV 246 (306)
Q Consensus 190 ~~l~~~G~d~i~v~~~~~~~~~~~-p~---~~~~v~~i~~-~~~ipvia-~---GGI-~s~~~~~~~ 246 (306)
+.+++.|+|++.+.... |.. +. -+++.+.|.+ ++++|||. | .|+ -+++.+.++
T Consensus 112 ~~A~~~Gadavlv~~P~----y~~~~s~~~l~~~f~~IA~aa~~lPiilYn~P~tg~~l~~e~~~~L 174 (344)
T 2hmc_A 112 VHAQKVGAKGLMVIPRV----LSRGSVIAAQKAHFKAILSAAPEIPAVIYNSPYYGFATRADLFFAL 174 (344)
T ss_dssp HHHHHHTCSEEEECCCC----SSSTTCHHHHHHHHHHHHHHSTTSCEEEEEBGGGTBCCCHHHHHHH
T ss_pred HHHHhcCCCEEEECCCc----cCCCCCHHHHHHHHHHHHhhCCCCcEEEEecCccCCCcCHHHHHHH
Confidence 99999999999886432 322 21 2567789999 78999766 3 243 478888777
No 327
>4h2h_A Mandelate racemase/muconate lactonizing enzyme; enolase, mandelate racemase subgroup, enzyme function initia EFI, structural genomics; HET: 0XW; 1.70A {Pelagibaca bermudensis} PDB: 2pmq_A*
Probab=95.65 E-value=0.19 Score=46.42 Aligned_cols=149 Identities=8% Similarity=0.116 Sum_probs=100.3
Q ss_pred CCceEEEecCCCHHHHHHHHHHH-hcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc---cccEEEEe
Q psy4398 101 KNKIILQIGTADPERALEAAKKV-EHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL---SIPVSCKI 176 (306)
Q Consensus 101 ~~p~ivql~g~~~~~~~~aa~~~-~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~---~~pv~vKi 176 (306)
..|+...+...++++..+.++.. ++||..+-+.+|.. +.+.-.+.++++++++ ++.+.+-.
T Consensus 139 ~v~~y~s~~~~~~~~~~~~a~~~~~~G~~~~KiKvg~~---------------~~~~di~~v~~vr~a~~g~~~~l~vDa 203 (376)
T 4h2h_A 139 SVSSYYSLGVMEPDEAARQALEKQREGYSRLQVKLGAR---------------PIEIDIEAIRKVWEAVRGTGIALAADG 203 (376)
T ss_dssp EEECEEEECSCCHHHHHHHHHHHHHHTCSEEEEECCSS---------------CHHHHHHHHHHHHHHHTTSCCEEEEEC
T ss_pred ceeEeeecccCCHHHHHHHHHHHHhcCceEEEEecCCC---------------CHHHHHHHHHHHHhhccCCeeEEEEee
Confidence 34677778888888887766655 45999999987642 1223345666676655 34566666
Q ss_pred ccCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhhhhccc
Q psy4398 177 RVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNCAFLRN 256 (306)
Q Consensus 177 r~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v~vGra 256 (306)
..+|+.+++.++++.+++.+. + + +++. .+++-.+++++.+++||.+-=.+.+..++.++++.+. .
T Consensus 204 N~~~~~~~A~~~~~~l~~~~~-~--i-----EeP~---~~~~~~~~l~~~~~~pia~dE~~~~~~~~~~~~~~~~----~ 268 (376)
T 4h2h_A 204 NRGWTTRDALRFSRECPDIPF-V--M-----EQPC---NSFEDLEAIRPLCHHALYMDEDGTSLNTVITAAATSL----V 268 (376)
T ss_dssp TTCCCHHHHHHHHHHCTTSCE-E--E-----ESCS---SSHHHHHHHGGGCCSCEEESTTCCSHHHHHHHHHTTC----C
T ss_pred ccCCCHHHHHHHHHHHhhccc-c--c-----cCCc---chhhhHhhhhhcccCccccCcccCCHHHHHHHHHhhc----c
Confidence 667999999999999987763 2 2 2222 2467789999999999988777889999988887532 1
Q ss_pred cCCCCCchH-------HHHHHHHHhcCCCC
Q psy4398 257 HYPVEKLPK-------TILYAHCKYKRFEV 279 (306)
Q Consensus 257 ll~~p~~~~-------~~l~~~~~~~g~~~ 279 (306)
-+-+|...+ +.+.++.+.+|+++
T Consensus 269 d~v~~d~~~~GGit~~~~ia~~a~~~gi~~ 298 (376)
T 4h2h_A 269 DGFGMKVSRIGGLQHMRAFRDFCAARNLPH 298 (376)
T ss_dssp SEECCBHHHHTSHHHHHHHHHHHHHHTCCE
T ss_pred CccccccceeCCcHHHHHHHHHHHHcCCCE
Confidence 112222222 25566777888774
No 328
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=95.63 E-value=0.075 Score=47.05 Aligned_cols=94 Identities=13% Similarity=0.154 Sum_probs=61.9
Q ss_pred HHHHHHHH-HHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEeccCCChHHHHHHHHHH
Q psy4398 114 ERALEAAK-KVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFHNEADTIALCKRL 192 (306)
Q Consensus 114 ~~~~~aa~-~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~a~~l 192 (306)
+...+-|+ .+++|+|.|+||..++. .+..+.+..+++++++.+++|+++-.. + .+.+++.
T Consensus 34 ~~a~~~a~~~v~~GAdiIDIg~~s~~------------~eE~~rv~~vi~~l~~~~~~pisIDT~---~----~~v~~aa 94 (271)
T 2yci_X 34 RPIQEWARRQAEKGAHYLDVNTGPTA------------DDPVRVMEWLVKTIQEVVDLPCCLDST---N----PDAIEAG 94 (271)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCSCS------------SCHHHHHHHHHHHHHHHCCCCEEEECS---C----HHHHHHH
T ss_pred HHHHHHHHHHHHCCCCEEEEcCCcCc------------hhHHHHHHHHHHHHHHhCCCeEEEeCC---C----HHHHHHH
Confidence 33444444 44569999999987632 245788899999999888999988766 2 3445555
Q ss_pred HHc--CCcEEE-EcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEe
Q psy4398 193 EAC--GIIAIG-VHGRTKAERPRHRNRIEMIRTLTQHLKIPVIAN 234 (306)
Q Consensus 193 ~~~--G~d~i~-v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~ 234 (306)
.++ |++.|. +++.. ..++-+..+.+..+.|+|+.
T Consensus 95 l~a~~Ga~iINdvs~~~--------d~~~~~~~~~a~~~~~vv~m 131 (271)
T 2yci_X 95 LKVHRGHAMINSTSADQ--------WKMDIFFPMAKKYEAAIIGL 131 (271)
T ss_dssp HHHCCSCCEEEEECSCH--------HHHHHHHHHHHHHTCEEEEE
T ss_pred HHhCCCCCEEEECCCCc--------cccHHHHHHHHHcCCCEEEE
Confidence 555 998887 65421 12334444555668888874
No 329
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=95.55 E-value=0.067 Score=48.81 Aligned_cols=89 Identities=15% Similarity=0.141 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHhcccccEEEEeccCCChHHHHHHHHHHHHcC--CcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEE
Q psy4398 155 DIACNILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACG--IIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVI 232 (306)
Q Consensus 155 ~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~a~~l~~~G--~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvi 232 (306)
+...++++.+++. +.|+.+-+. ... +..+.++.+.+.| ++.+.++... + . ....++.++++++.++.|++
T Consensus 81 ~~~~~~i~~~~~~-g~~v~v~~g--~~~-~~~~~a~~~~~~g~~~~~i~i~~~~--G-~-~~~~~~~i~~lr~~~~~~~v 152 (336)
T 1ypf_A 81 EKRISFIRDMQSR-GLIASISVG--VKE-DEYEFVQQLAAEHLTPEYITIDIAH--G-H-SNAVINMIQHIKKHLPESFV 152 (336)
T ss_dssp GGHHHHHHHHHHT-TCCCEEEEC--CSH-HHHHHHHHHHHTTCCCSEEEEECSS--C-C-SHHHHHHHHHHHHHCTTSEE
T ss_pred HHHHHHHHHHHhc-CCeEEEeCC--CCH-HHHHHHHHHHhcCCCCCEEEEECCC--C-C-cHHHHHHHHHHHHhCCCCEE
Confidence 3455667766643 567777653 443 3456788889999 9999885421 1 1 12467899999999965555
Q ss_pred EecCCCCHHHHHHHHHhhh
Q psy4398 233 ANGGSKEIVDYGGVFSLNC 251 (306)
Q Consensus 233 a~GGI~s~~~~~~~l~~~v 251 (306)
..|+|.++++++.+++.|+
T Consensus 153 i~G~v~s~e~A~~a~~aGa 171 (336)
T 1ypf_A 153 IAGNVGTPEAVRELENAGA 171 (336)
T ss_dssp EEEEECSHHHHHHHHHHTC
T ss_pred EECCcCCHHHHHHHHHcCC
Confidence 5677899999999999875
No 330
>3vc5_A Mandelate racemase/muconate lactonizing protein; dehydratase, magnesium binding, enzyme function initiative, enolase, isomerase; 1.50A {Thermobispora bispora} PDB: 3vc6_A 4dhg_A
Probab=95.51 E-value=0.13 Score=48.71 Aligned_cols=113 Identities=12% Similarity=0.208 Sum_probs=86.3
Q ss_pred CCHHHHHHHHHHH-hc-CCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc-cccEEEEeccCCChHHHHH
Q psy4398 111 ADPERALEAAKKV-EH-DVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL-SIPVSCKIRVFHNEADTIA 187 (306)
Q Consensus 111 ~~~~~~~~aa~~~-~~-g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~g~~~~~~~~ 187 (306)
.+++++++.|+.+ ++ ||..+-+..|.. +++.-.+.++++|+++ +..+.+-...+|+.+++++
T Consensus 187 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~---------------~~~~Di~rv~avRea~pd~~L~vDaN~~w~~~~Ai~ 251 (441)
T 3vc5_A 187 LDPDGIVAQARLLIGEYGFRSIKLKGGVF---------------PPEQEAEAIQALRDAFPGLPLRLDPNAAWTVETSIR 251 (441)
T ss_dssp CSHHHHHHHHHHHHHHHCCSSEEEECSSS---------------CHHHHHHHHHHHHHHSTTCCEEEECTTCSCHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEccCCC---------------CHHHHHHHHHHHHHhCCCCcEeccCCCCCCHHHHHH
Confidence 5788888887765 44 999999976532 2333456778888887 4566776666899999999
Q ss_pred HHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHh
Q psy4398 188 LCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSL 249 (306)
Q Consensus 188 ~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~ 249 (306)
+++.+++. +.+|- ++. .+++..+++++.+++||.+.=.+.+..++.++++.
T Consensus 252 ~~~~L~~~-l~~iE-------eP~---~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~ 302 (441)
T 3vc5_A 252 VGRALDGV-LEYLE-------DPT---PGIDGMARVAAEVPMPLATNMCVVTPEHLPAAVER 302 (441)
T ss_dssp HHHHTTTT-CSEEE-------CCS---SSHHHHHHHHTTSSSCEEESSSCCSGGGHHHHHHH
T ss_pred HHHHHHHH-HHHhh-------ccC---CCHHHHHHHHhcCCCCEEeCCCCCCHHHHHHHHHh
Confidence 99999987 76663 222 26788899999999999887678888998888875
No 331
>3mzn_A Glucarate dehydratase; lyase, structural genomics, protein structure initiative, PS nysgrc; 1.85A {Chromohalobacter salexigens} PDB: 3nfu_A
Probab=95.48 E-value=0.2 Score=47.55 Aligned_cols=144 Identities=8% Similarity=0.074 Sum_probs=96.1
Q ss_pred CCHHHHHHHHHHH-h-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc-cccEEEEeccCCChHHHHH
Q psy4398 111 ADPERALEAAKKV-E-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL-SIPVSCKIRVFHNEADTIA 187 (306)
Q Consensus 111 ~~~~~~~~aa~~~-~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~g~~~~~~~~ 187 (306)
.+++++++.++.+ + .||..+-+.+|.+. ++.-.+.++++|++. +..+.+-...+|+.+++.+
T Consensus 181 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~~---------------~~~Di~~v~avRea~pd~~L~vDaN~~w~~~~A~~ 245 (450)
T 3mzn_A 181 MTPEAVANLARAAYDRYGFKDFKLKGGVLR---------------GEEEADCIRALHEAFPEARLALDPNGAWKLDEAVR 245 (450)
T ss_dssp CSHHHHHHHHHHHHHHHCCSEEEEECSSSC---------------HHHHHHHHHHHHHHCTTSEEEEECTTCBCHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCEEEECCCCCC---------------HHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHH
Confidence 5788888887754 4 49999999876422 233355678888875 3455555555799999999
Q ss_pred HHHHHHHcCCcEEEEcccCCCCCCCCCCc----HHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhh-hhccccCCCCC
Q psy4398 188 LCKRLEACGIIAIGVHGRTKAERPRHRNR----IEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNC-AFLRNHYPVEK 262 (306)
Q Consensus 188 ~a~~l~~~G~d~i~v~~~~~~~~~~~p~~----~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v-~vGrall~~p~ 262 (306)
+++.+++. +.+|- ++. .+.+ ++..+++++.+++||.+.=-+.+..++.++++.+. .+ +..++.
T Consensus 246 ~~~~L~~~-i~~iE-------eP~-~~~d~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~di---~~~d~~ 313 (450)
T 3mzn_A 246 VLEPIKHL-LSYAE-------DPC-GQEGGFSGRETMAEFKKRTGLPTATNMIATDYKQLQYAVQLNSVDI---PLADCH 313 (450)
T ss_dssp HHGGGGGG-CSEEE-------SSB-CCBTTBCHHHHHHHHHHHHCCCEEESSSSSSHHHHHHHHHHTCCSE---EBCCHH
T ss_pred HHHHhhhc-cceee-------CCC-CcccccchHHHHHHHHHhcCCCEEeCCccCCHHHHHHHHHcCCCCE---EEecCc
Confidence 99999987 66553 222 2223 67889999999999887545677888888887532 11 111220
Q ss_pred ---c-hHHHHHHHHHhcCCCCCc
Q psy4398 263 ---L-PKTILYAHCKYKRFEVPK 281 (306)
Q Consensus 263 ---~-~~~~l~~~~~~~g~~~~~ 281 (306)
+ .-+.+.+..+++|++..+
T Consensus 314 ~GGit~a~kia~lA~a~gv~~~~ 336 (450)
T 3mzn_A 314 FWTMQGAVAVGELCNEWGMTWGS 336 (450)
T ss_dssp HHCHHHHHHHHHHHHHTTCCCBC
T ss_pred cCCHHHHHHHHHHHHHcCCEEEe
Confidence 1 113666778888888544
No 332
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=95.44 E-value=0.09 Score=46.74 Aligned_cols=89 Identities=17% Similarity=0.187 Sum_probs=56.6
Q ss_pred ceEEEecCCCHHHHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEecc--C-
Q psy4398 103 KIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRV--F- 179 (306)
Q Consensus 103 p~ivql~g~~~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~--g- 179 (306)
...+.++..+.++...| .+.|+|.|||.-+-.. |+ +--. ..+++.+++.+++||.+=+|+ |
T Consensus 39 ~~~lEvc~~s~~~a~~A---~~gGAdRIELc~~l~~--------GG-lTPS----~g~i~~a~~~~~ipV~vMIRPRgGd 102 (287)
T 3iwp_A 39 GFLMEVCVDSVESAVNA---ERGGADRIELCSGLSE--------GG-TTPS----MGVLQVVKQSVQIPVFVMIRPRGGD 102 (287)
T ss_dssp CSEEEEEESSHHHHHHH---HHHTCSEEEECBCGGG--------TC-BCCC----HHHHHHHHTTCCSCEEEECCSSSSC
T ss_pred CceEEEEeCCHHHHHHH---HHhCCCEEEECCCCCC--------CC-CCCC----HHHHHHHHHhcCCCeEEEEecCCCC
Confidence 46677777776544322 2359999999622111 11 1111 235667777788999988886 2
Q ss_pred --CChH---HHHHHHHHHHHcCCcEEEEcccCC
Q psy4398 180 --HNEA---DTIALCKRLEACGIIAIGVHGRTK 207 (306)
Q Consensus 180 --~~~~---~~~~~a~~l~~~G~d~i~v~~~~~ 207 (306)
.+.. ...+-++.+.++|+|+|++..-+.
T Consensus 103 F~Ys~~E~~~M~~dI~~~~~~GAdGvVfG~L~~ 135 (287)
T 3iwp_A 103 FLYSDREIEVMKADIRLAKLYGADGLVFGALTE 135 (287)
T ss_dssp SCCCHHHHHHHHHHHHHHHHTTCSEEEECCBCT
T ss_pred cccCHHHHHHHHHHHHHHHHcCCCEEEEeeeCC
Confidence 2323 356777888899999999976443
No 333
>3cyj_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, isomerase, PSI-2; 2.30A {Rubrobacter xylanophilus dsm 9941}
Probab=95.43 E-value=0.36 Score=44.41 Aligned_cols=149 Identities=9% Similarity=0.023 Sum_probs=98.2
Q ss_pred CceEEEecC--CCHHHHHHHHHHH-hcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhccc--ccEEEEe
Q psy4398 102 NKIILQIGT--ADPERALEAAKKV-EHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLS--IPVSCKI 176 (306)
Q Consensus 102 ~p~ivql~g--~~~~~~~~aa~~~-~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~--~pv~vKi 176 (306)
.|+...++. .+++++.+.++.+ ++||..+-+.+|. +++.-.+.++++|+.++ +.+.+..
T Consensus 132 vp~~~~~g~~~~~~~~~~~~a~~~~~~G~~~~KiKvG~----------------~~~~d~~~v~avr~a~g~~~~l~vDa 195 (372)
T 3cyj_A 132 VPVYGSGGFTSYPLRRLQEQLGGWAAAGIPRVKMKVGR----------------EPEKDPERVRAAREAIGESVELMVDA 195 (372)
T ss_dssp EEEEEECCCTTSCHHHHHHHHHHHHHTTCCEEEEECCS----------------SGGGHHHHHHHHHHHHCTTSEEEEEC
T ss_pred ceEEEEcCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCC----------------CHHHHHHHHHHHHHHhCCCCeEEEEC
Confidence 455444422 2456666655544 5699999997542 33444567777777763 5566666
Q ss_pred ccCCChHHHHHHHHHHHHc-CCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCC--CcEEEecCCCCHHHHHHHHHhhhhh
Q psy4398 177 RVFHNEADTIALCKRLEAC-GIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLK--IPVIANGGSKEIVDYGGVFSLNCAF 253 (306)
Q Consensus 177 r~g~~~~~~~~~a~~l~~~-G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~--ipvia~GGI~s~~~~~~~l~~~v~v 253 (306)
..+|+.+++.++++.+++. ++.+|- ++. .+.+++-.+++++.++ +||.+-=.+.+..+++++ ...+
T Consensus 196 N~~~~~~~a~~~~~~l~~~~~i~~iE-------qP~-~~~d~~~~~~l~~~~~~~ipIa~dE~~~~~~~~~~~-~~a~-- 264 (372)
T 3cyj_A 196 NGAYTRKQALYWAGAFAREAGISYLE-------EPV-SSEDREGLRLLRDRGPGGVAIAAGEYEWTLPQLHDL-AGCV-- 264 (372)
T ss_dssp TTCSCHHHHHHHHHHHHHHHCCCEEE-------CSS-CTTCHHHHHHHHHHSCTTCEEEECTTCCSHHHHHHH-HTTC--
T ss_pred CCCCCHHHHHHHHHHHHhhcCCcEEE-------CCC-CcccHHHHHHHHHhCCCCCCEECCCCccCHHHHHHH-hCCC--
Confidence 6679999999999999999 888773 222 2458889999999987 799887778888888776 3211
Q ss_pred ccccCCCC-CchH----HHHHHHHHhcCCC
Q psy4398 254 LRNHYPVE-KLPK----TILYAHCKYKRFE 278 (306)
Q Consensus 254 Grall~~p-~~~~----~~l~~~~~~~g~~ 278 (306)
..+.-++ .+.- +.+.+..+++|++
T Consensus 265 -d~i~ik~~~~GGit~~~~i~~~A~~~gi~ 293 (372)
T 3cyj_A 265 -DILQADVTRCGGITGLLRVDGICRGHQIP 293 (372)
T ss_dssp -SEEEECTTTTTHHHHHTTHHHHHHHHTCC
T ss_pred -CEEecCchhhCCHHHHHHHHHHHHHcCCe
Confidence 1111233 2211 2666778888887
No 334
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=95.40 E-value=0.049 Score=46.68 Aligned_cols=73 Identities=15% Similarity=0.120 Sum_probs=44.5
Q ss_pred HHhc-CCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHH---hcccccEEEEecc--C---CChHH---HHHHH
Q psy4398 122 KVEH-DVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLI---SNLSIPVSCKIRV--F---HNEAD---TIALC 189 (306)
Q Consensus 122 ~~~~-g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~---~~~~~pv~vKir~--g---~~~~~---~~~~a 189 (306)
.+++ |+|.|||+-+-. -|+ + .|. ..+++.++ +.+++||.|=+|+ | .+.++ ..+-+
T Consensus 16 ~A~~~GAdRIELc~~L~--------~GG-l--TPS--~g~i~~~~~~~~~~~ipV~vMIRPR~GdF~Ys~~E~~~M~~Di 82 (224)
T 2bdq_A 16 RLDKAIISRVELCDNLA--------VGG-T--TPS--YGVIKEANQYLHEKGISVAVMIRPRGGNFVYNDLELRIMEEDI 82 (224)
T ss_dssp GCCTTTCCEEEEEBCGG--------GTC-B--CCC--HHHHHHHHHHHHHTTCEEEEECCSSSSCSCCCHHHHHHHHHHH
T ss_pred HHHHcCCCEEEEcCCcc--------cCC-c--CCC--HHHHHHHHHhhhhcCCceEEEECCCCCCCcCCHHHHHHHHHHH
Confidence 3444 999999963211 111 1 111 12334444 6678999999987 2 23333 56667
Q ss_pred HHHHHcCCcEEEEcccCC
Q psy4398 190 KRLEACGIIAIGVHGRTK 207 (306)
Q Consensus 190 ~~l~~~G~d~i~v~~~~~ 207 (306)
+.+.++|+|++++-.-+.
T Consensus 83 ~~~~~~GadGvV~G~Lt~ 100 (224)
T 2bdq_A 83 LRAVELESDALVLGILTS 100 (224)
T ss_dssp HHHHHTTCSEEEECCBCT
T ss_pred HHHHHcCCCEEEEeeECC
Confidence 788899999999855443
No 335
>3p0w_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, protein structure initiative; HET: GKR; 1.71A {Ralstonia pickettii} PDB: 4hn8_A 3nxl_A
Probab=95.35 E-value=0.17 Score=48.27 Aligned_cols=145 Identities=12% Similarity=0.099 Sum_probs=96.0
Q ss_pred CCCHHHHHHHHHHH-h-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc-cccEEEEeccCCChHHHH
Q psy4398 110 TADPERALEAAKKV-E-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL-SIPVSCKIRVFHNEADTI 186 (306)
Q Consensus 110 g~~~~~~~~aa~~~-~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~g~~~~~~~ 186 (306)
+.+++++++.++.+ + +||..+-+.+|.+. ++.-.+.++++|+++ ++.+.+-...+|+.+++.
T Consensus 198 ~~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~~---------------~~~Di~rv~avRea~pd~~L~vDaN~~w~~~~Ai 262 (470)
T 3p0w_A 198 AMTPAAIARLAEAATERYGFADFKLKGGVMP---------------GAEEMEAIAAIKARFPHARVTLDPNGAWSLNEAI 262 (470)
T ss_dssp BCSHHHHHHHHHHHHHHHCCSEEEEECSSSC---------------HHHHHHHHHHHHHHCTTSEEEEECTTBBCHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCCCEEEEeCCCCC---------------HHHHHHHHHHHHHhCCCCeEEeeCCCCCCHHHHH
Confidence 35788888877754 5 49999999876422 223345678888876 345666655579999999
Q ss_pred HHHHHHHHcCCcEEEEcccCCCCCCCCCCc----HHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhh-hhccccCCCC
Q psy4398 187 ALCKRLEACGIIAIGVHGRTKAERPRHRNR----IEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNC-AFLRNHYPVE 261 (306)
Q Consensus 187 ~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~----~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v-~vGrall~~p 261 (306)
++++.+++. +.+|- ++. .+.+ ++..+++++.+++||.+.=-+.+..++.++++.+. .+ +.-++
T Consensus 263 ~~~~~Le~~-l~~iE-------eP~-~~~d~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a~di---v~~d~ 330 (470)
T 3p0w_A 263 ALCKGQGHL-VAYAE-------DPC-GPEAGYSGREVMAEFKRATGIPTATNMIATDWRQMGHAVQLHAVDI---PLADP 330 (470)
T ss_dssp HHHTTCTTT-CSEEE-------SCB-CCBTTBCHHHHHHHHHHHHCCCEEESSSSCSHHHHHHHHHTTCCSE---EBCCH
T ss_pred HHHHhcccc-ceeec-------CCC-ChhhccchHHHHHHHHhcCCCCEEeCCccCCHHHHHHHHHcCCCCE---EEecC
Confidence 999999876 66552 222 2233 67889999999999987555777888888887532 11 11111
Q ss_pred ----CchHHHHHHHHHhcCCCCCc
Q psy4398 262 ----KLPKTILYAHCKYKRFEVPK 281 (306)
Q Consensus 262 ----~~~~~~l~~~~~~~g~~~~~ 281 (306)
...-..+.+..+++|++..+
T Consensus 331 ~~GGit~a~kia~lA~a~gv~~~~ 354 (470)
T 3p0w_A 331 HFWTMQGSVRVAQLCDEWGLTWGS 354 (470)
T ss_dssp HHHCHHHHHHHHHHHHHHTCCCBC
T ss_pred ccCCHHHHHHHHHHHHHcCCEEEe
Confidence 01113666777788887443
No 336
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=95.34 E-value=0.03 Score=49.72 Aligned_cols=86 Identities=9% Similarity=-0.016 Sum_probs=57.5
Q ss_pred HHHHHHHHhccc--ccEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhC-----CCc
Q psy4398 158 CNILTTLISNLS--IPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHL-----KIP 230 (306)
Q Consensus 158 ~eiv~~v~~~~~--~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~-----~ip 230 (306)
.+-++++++..+ .++.+-+. +.+ -++.+.++|+|+|-++.. ..+.++++++.+ ++|
T Consensus 169 ~~ai~~~r~~~~~~~~i~vev~---tle----e~~~A~~aGaD~I~ld~~----------~~~~l~~~v~~l~~~~~~~~ 231 (273)
T 2b7n_A 169 KSFLTHARKNLPFTAKIEIECE---SFE----EAKNAMNAGADIVMCDNL----------SVLETKEIAAYRDAHYPFVL 231 (273)
T ss_dssp HHHHHHHGGGSCTTCCEEEEES---SHH----HHHHHHHHTCSEEEEETC----------CHHHHHHHHHHHHHHCTTCE
T ss_pred HHHHHHHHHhCCCCceEEEEcC---CHH----HHHHHHHcCCCEEEECCC----------CHHHHHHHHHHhhccCCCcE
Confidence 566777777764 34555443 222 233444689999998742 235555444443 389
Q ss_pred EEEecCCCCHHHHHHHHHhhh---hhccccCCCC
Q psy4398 231 VIANGGSKEIVDYGGVFSLNC---AFLRNHYPVE 261 (306)
Q Consensus 231 via~GGI~s~~~~~~~l~~~v---~vGrall~~p 261 (306)
|.++||| +.+++.++++.|+ .+|+.++.-|
T Consensus 232 i~AsGGI-~~~ni~~~~~aGaD~i~vGs~i~~a~ 264 (273)
T 2b7n_A 232 LEASGNI-SLESINAYAKSGVDAISVGALIHQAT 264 (273)
T ss_dssp EEEESSC-CTTTHHHHHTTTCSEEECTHHHHTCC
T ss_pred EEEECCC-CHHHHHHHHHcCCcEEEEcHHhcCCC
Confidence 9999999 7999999998876 7788766544
No 337
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=95.30 E-value=0.43 Score=42.77 Aligned_cols=122 Identities=18% Similarity=0.212 Sum_probs=75.0
Q ss_pred CCceEEEec-C-CCHHHHHHHHHHHh-cCCCEEEEccCCCccccccCCc-cccccCChHHHHHHHHHHHhcc---cccEE
Q psy4398 101 KNKIILQIG-T-ADPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGM-GAALLSTPDIACNILTTLISNL---SIPVS 173 (306)
Q Consensus 101 ~~p~ivql~-g-~~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~-G~~l~~~~~~~~eiv~~v~~~~---~~pv~ 173 (306)
..|+++-+- | .++++..+.++.+. .|+.+|.|.=.... + +.+.. |..+. ..+...+=|++.+++. +.++.
T Consensus 80 ~~PviaD~d~Gyg~~~~v~~tv~~l~~aGaagv~iEDq~~~-K-rcgh~~gk~l~-~~~e~~~rI~Aa~~A~~~~~~d~~ 156 (302)
T 3fa4_A 80 STPVIADADTGYGGPIMVARTTEQYSRSGVAAFHIEDQVQT-K-RCGHLAGKILV-DTDTYVTRIRAAVQARQRIGSDIV 156 (302)
T ss_dssp TSCEEEECTTTTSSHHHHHHHHHHHHHTTCCEEEECSBCCC---------CCCBC-CHHHHHHHHHHHHHHHHHHTCCCE
T ss_pred CCCEEEECCCCCCCHHHHHHHHHHHHHcCCcEEEECCCCCC-c-ccCCCCCCeec-CHHHHHHHHHHHHHHHHhcCCCEE
Confidence 578888873 2 36777888888765 59999999644211 1 11111 22232 2333333333443332 44444
Q ss_pred EEecc----CCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhC-CCcEEEe
Q psy4398 174 CKIRV----FHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHL-KIPVIAN 234 (306)
Q Consensus 174 vKir~----g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~-~ipvia~ 234 (306)
+=-|. ....+++++=++...++|+|.|-+++. .+.+.++++.+.+ +.|+.+|
T Consensus 157 I~ARTDa~~~~gldeAi~Ra~ay~eAGAD~ifi~g~---------~~~~ei~~~~~~~~~~Pl~~n 213 (302)
T 3fa4_A 157 VIARTDSLQTHGYEESVARLRAARDAGADVGFLEGI---------TSREMARQVIQDLAGWPLLLN 213 (302)
T ss_dssp EEEEECCHHHHCHHHHHHHHHHHHTTTCSEEEETTC---------CCHHHHHHHHHHTTTSCEEEE
T ss_pred EEEEecccccCCHHHHHHHHHHHHHcCCCEEeecCC---------CCHHHHHHHHHHhcCCceeEE
Confidence 44443 234677888899999999999998763 2557889999988 5898775
No 338
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=95.29 E-value=0.25 Score=43.34 Aligned_cols=92 Identities=17% Similarity=0.167 Sum_probs=67.8
Q ss_pred CCc-eEEEecCCCHHHHHHHHHHHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc-cccEEEEec
Q psy4398 101 KNK-IILQIGTADPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL-SIPVSCKIR 177 (306)
Q Consensus 101 ~~p-~ivql~g~~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir 177 (306)
|.| +++.|.+.+.++..+-++.+. .|+|.||+- -|-+.. ..+.+.+.+.+..+++.+ +.|+.+-+|
T Consensus 18 g~PkIcvpl~~~t~~e~l~~a~~~~~~~aD~vElR---------~D~l~~--~~~~~~v~~~l~~lr~~~~~lPiI~T~R 86 (258)
T 4h3d_A 18 GRPKICVPIIGKNKKDIIKEAKELKDACLDIIEWR---------VDFFEN--VENIKEVKEVLYELRSYIHDIPLLFTFR 86 (258)
T ss_dssp SSCEEEEEECCSSHHHHHHHHHHHTTSSCSEEEEE---------GGGCTT--TTCHHHHHHHHHHHHHHCTTSCEEEECC
T ss_pred CCCEEEEEeCCCCHHHHHHHHHHHhhcCCCEEEEe---------eccccc--cCCHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 445 788999999999888777776 499999994 332211 135678889999998876 689999998
Q ss_pred c----C---CChHHHHHHHHHHHHcC-CcEEEEc
Q psy4398 178 V----F---HNEADTIALCKRLEACG-IIAIGVH 203 (306)
Q Consensus 178 ~----g---~~~~~~~~~a~~l~~~G-~d~i~v~ 203 (306)
. | .+.++..++.+.+.+.| +|+|.+-
T Consensus 87 t~~EGG~~~~~~~~~~~ll~~~~~~~~~d~iDvE 120 (258)
T 4h3d_A 87 SVVEGGEKLISRDYYTTLNKEISNTGLVDLIDVE 120 (258)
T ss_dssp CGGGTCSCCCCHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred chhhCCCCCCCHHHHHHHHHHHHhcCCchhhHHh
Confidence 6 2 23455677777777776 8999874
No 339
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=95.26 E-value=0.46 Score=43.47 Aligned_cols=132 Identities=14% Similarity=0.144 Sum_probs=84.0
Q ss_pred eEEEecC---CCHHHHHHHHHHHhc-CCCEEEEccCCCccccccCC--c-----cccc-------cCChHHHHHHHHHHH
Q psy4398 104 IILQIGT---ADPERALEAAKKVEH-DVAAIDINMGCPKQFSLTGG--M-----GAAL-------LSTPDIACNILTTLI 165 (306)
Q Consensus 104 ~ivql~g---~~~~~~~~aa~~~~~-g~d~veln~gcP~~~~~~~~--~-----G~~l-------~~~~~~~~eiv~~v~ 165 (306)
+|.-++. .+.+...+.++.+++ |+|+|-+..-.|.+....+. | |..+ .-..+.. +.+....
T Consensus 22 iIAe~g~NH~gs~e~a~~li~~ak~aGadavKfq~~k~~tl~s~~~~~fq~~~~~~~~y~~~~~~~l~~e~~-~~L~~~~ 100 (349)
T 2wqp_A 22 IICEIGINHEGSLKTAFEMVDAAYNAGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIMERCALNEEDE-IKLKEYV 100 (349)
T ss_dssp EEEEEETTTTTCHHHHHHHHHHHHHHTCSEEEEEECCHHHHCCGGGGGCCCTTCSSCHHHHHHHHCCCHHHH-HHHHHHH
T ss_pred EEEecCCcccCCHHHHHHHHHHHHHhCCCEEeeeecccccccCcchhccccCCCCccHHHHHHHhCCCHHHH-HHHHHHH
Confidence 5555653 356777777777765 99999997665533111111 1 1111 1122333 3444445
Q ss_pred hcccccEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHH
Q psy4398 166 SNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGG 245 (306)
Q Consensus 166 ~~~~~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~ 245 (306)
+..+++++.-.= +.+ .+ +.+++.|+|.+-|..+.. .|+++++.+.+ ++.|||.+-|..|++++..
T Consensus 101 ~~~Gi~~~st~~---d~~-sv---d~l~~~~v~~~KI~S~~~-------~n~~LL~~va~-~gkPviLstGmat~~Ei~~ 165 (349)
T 2wqp_A 101 ESKGMIFISTLF---SRA-AA---LRLQRMDIPAYKIGSGEC-------NNYPLIKLVAS-FGKPIILSTGMNSIESIKK 165 (349)
T ss_dssp HHTTCEEEEEEC---SHH-HH---HHHHHHTCSCEEECGGGT-------TCHHHHHHHHT-TCSCEEEECTTCCHHHHHH
T ss_pred HHhCCeEEEeeC---CHH-HH---HHHHhcCCCEEEECcccc-------cCHHHHHHHHh-cCCeEEEECCCCCHHHHHH
Confidence 556777654433 322 33 445678999999976643 48899999986 5899999999999999999
Q ss_pred HHHhhh
Q psy4398 246 VFSLNC 251 (306)
Q Consensus 246 ~l~~~v 251 (306)
+++...
T Consensus 166 Ave~i~ 171 (349)
T 2wqp_A 166 SVEIIR 171 (349)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 888744
No 340
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=95.24 E-value=0.15 Score=44.57 Aligned_cols=92 Identities=10% Similarity=0.133 Sum_probs=64.9
Q ss_pred HHHHhcccccEEEEecc-----CC-ChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEec
Q psy4398 162 TTLISNLSIPVSCKIRV-----FH-NEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANG 235 (306)
Q Consensus 162 ~~v~~~~~~pv~vKir~-----g~-~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~G 235 (306)
+++++. +.+++.-+.. |+ ...+..++|+.++++|+++|++-. -...+.+ ..+.++.+++.+++||+.-+
T Consensus 39 ~al~~~-~~~~IaE~k~aSPskg~i~~~~p~~~A~~~~~~GA~~isvlt--~~~~f~G--~~~~l~~i~~~v~lPvl~kd 113 (254)
T 1vc4_A 39 EALLRP-GLSVIAEVKRQSPSEGLIREVDPVEAALAYARGGARAVSVLT--EPHRFGG--SLLDLKRVREAVDLPLLRKD 113 (254)
T ss_dssp HHHTSS-SCEEEEEECSCCTTTCCCCSCCHHHHHHHHHHTTCSEEEEEC--CCSSSCC--CHHHHHHHHHHCCSCEEEES
T ss_pred HHHhhc-CCcEEeeecCCCcCCCcCCCCCHHHHHHHHHHcCCCEEEEec--chhhhcc--CHHHHHHHHHhcCCCEEECC
Confidence 344432 5667764432 32 115689999999999999999832 1222222 56888999999999999999
Q ss_pred CCCCHHHHHHHHHhhh---hhccccC
Q psy4398 236 GSKEIVDYGGVFSLNC---AFLRNHY 258 (306)
Q Consensus 236 GI~s~~~~~~~l~~~v---~vGrall 258 (306)
+|.+..+...+.+.|+ .++.+.+
T Consensus 114 fI~d~~qi~~a~~~GAD~VlL~~~~l 139 (254)
T 1vc4_A 114 FVVDPFMLEEARAFGASAALLIVALL 139 (254)
T ss_dssp CCCSHHHHHHHHHTTCSEEEEEHHHH
T ss_pred cCCCHHHHHHHHHcCCCEEEECccch
Confidence 9999999988887754 5555544
No 341
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=95.24 E-value=0.55 Score=40.30 Aligned_cols=113 Identities=14% Similarity=0.127 Sum_probs=74.4
Q ss_pred CHHHHHHHHHHHhc-CCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEeccC-C----ChHHH
Q psy4398 112 DPERALEAAKKVEH-DVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVF-H----NEADT 185 (306)
Q Consensus 112 ~~~~~~~aa~~~~~-g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g-~----~~~~~ 185 (306)
++....+.|+.+++ |+.+|..+ . .+-++++|+.++.|++-..+.. . -....
T Consensus 34 ~~~~~~~~A~a~~~~Ga~~i~~~-------------------~----~~~i~~ir~~v~~Pvig~~k~~~~~~~~~I~~~ 90 (229)
T 3q58_A 34 KPEIVAAMAQAAASAGAVAVRIE-------------------G----IENLRTVRPHLSVPIIGIIKRDLTGSPVRITPY 90 (229)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEE-------------------S----HHHHHHHGGGCCSCEEEECBCCCSSCCCCBSCS
T ss_pred CcchHHHHHHHHHHCCCcEEEEC-------------------C----HHHHHHHHHhcCCCEEEEEeecCCCCceEeCcc
Confidence 46778888887765 99999873 0 2457889999999987433321 0 11112
Q ss_pred HHHHHHHHHcCCcEEEEcccCCCCCCCCCCc-HHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhh-hhc
Q psy4398 186 IALCKRLEACGIIAIGVHGRTKAERPRHRNR-IEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNC-AFL 254 (306)
Q Consensus 186 ~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~-~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v-~vG 254 (306)
.+-++.+.++|+|.|.+...... .|.. -++++.+++. ++++++ .+.+.++++.+.+.|+ .+|
T Consensus 91 ~~~i~~~~~aGad~I~l~~~~~~----~p~~l~~~i~~~~~~-g~~v~~--~v~t~eea~~a~~~Gad~Ig 154 (229)
T 3q58_A 91 LQDVDALAQAGADIIAFDASFRS----RPVDIDSLLTRIRLH-GLLAMA--DCSTVNEGISCHQKGIEFIG 154 (229)
T ss_dssp HHHHHHHHHHTCSEEEEECCSSC----CSSCHHHHHHHHHHT-TCEEEE--ECSSHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHcCCCEEEECccccC----ChHHHHHHHHHHHHC-CCEEEE--ecCCHHHHHHHHhCCCCEEE
Confidence 33456678899999987654221 1222 3566777654 677665 6789999999988876 454
No 342
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=95.17 E-value=0.088 Score=46.64 Aligned_cols=96 Identities=13% Similarity=0.014 Sum_probs=69.2
Q ss_pred HHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhh---hhccccCC
Q psy4398 183 ADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNC---AFLRNHYP 259 (306)
Q Consensus 183 ~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v---~vGrall~ 259 (306)
.+..++|+.++++|+++|++-.- ...+. ..++.+.++++.+++||+.-+.|.|..++.++...|+ .++.+.+.
T Consensus 79 ~dp~~~A~~y~~~GA~~IsVltd--~~~f~--Gs~~~L~~ir~~v~lPVl~Kdfi~d~~qi~ea~~~GAD~VlLi~a~L~ 154 (272)
T 3tsm_A 79 FDPPALAKAYEEGGAACLSVLTD--TPSFQ--GAPEFLTAARQACSLPALRKDFLFDPYQVYEARSWGADCILIIMASVD 154 (272)
T ss_dssp CCHHHHHHHHHHTTCSEEEEECC--STTTC--CCHHHHHHHHHTSSSCEEEESCCCSTHHHHHHHHTTCSEEEEETTTSC
T ss_pred CCHHHHHHHHHHCCCCEEEEecc--ccccC--CCHHHHHHHHHhcCCCEEECCccCCHHHHHHHHHcCCCEEEEcccccC
Confidence 35889999999999999987431 11222 2678999999999999999999999999999888765 55655553
Q ss_pred CCCchH-HHHHHHHHhcCCC-CCcceeh
Q psy4398 260 VEKLPK-TILYAHCKYKRFE-VPKYETV 285 (306)
Q Consensus 260 ~p~~~~-~~l~~~~~~~g~~-~~~~~~~ 285 (306)
+ .. .++-+...+.|+. +.+.|+.
T Consensus 155 ~---~~l~~l~~~a~~lGl~~lvevh~~ 179 (272)
T 3tsm_A 155 D---DLAKELEDTAFALGMDALIEVHDE 179 (272)
T ss_dssp H---HHHHHHHHHHHHTTCEEEEEECSH
T ss_pred H---HHHHHHHHHHHHcCCeEEEEeCCH
Confidence 1 22 2566667777876 4444443
No 343
>1wue_A Mandelate racemase/muconate lactonizing enzyme FA protein; structural genomics, unknown function, nysgxrc target T2185; 2.10A {Enterococcus faecalis} SCOP: c.1.11.2 d.54.1.1
Probab=95.16 E-value=0.14 Score=47.46 Aligned_cols=120 Identities=13% Similarity=0.195 Sum_probs=85.1
Q ss_pred ceEEEec-CCCHHHHHHHHHHH-hcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc-cccEEEEeccC
Q psy4398 103 KIILQIG-TADPERALEAAKKV-EHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL-SIPVSCKIRVF 179 (306)
Q Consensus 103 p~ivql~-g~~~~~~~~aa~~~-~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~g 179 (306)
|+-..++ +.+++++.+.++.+ ++||..+-+.++ |. .+. +.++++|+.+ ++.+.+-...+
T Consensus 151 ~~~~~~g~~~~~~~~~~~a~~~~~~G~~~~KiKvg-~~-------------~d~----~~v~avr~a~~~~~l~vDaN~~ 212 (386)
T 1wue_A 151 PVGISLGIQEDLPQLLKQVQLAVEKGYQRVKLKIR-PG-------------YDV----EPVALIRQHFPNLPLMVDANSA 212 (386)
T ss_dssp ECCEEECCCSCHHHHHHHHHHHHHTTCSCEEEECB-TT-------------BSH----HHHHHHHHHCTTSCEEEECTTC
T ss_pred EeeEEecCCCCHHHHHHHHHHHHHhhhheEEEeeC-cH-------------HHH----HHHHHHHHhCCCCeEEEeCCCC
Confidence 3333443 34688887766654 569999998754 21 233 4467777765 34566665667
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHh
Q psy4398 180 HNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSL 249 (306)
Q Consensus 180 ~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~ 249 (306)
|+.+++ ++++.+++.++.+|- ++. .+.+++-.+++++.+++||.+-=.+.+..+++++++.
T Consensus 213 ~~~~~a-~~~~~l~~~~i~~iE-------qP~-~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~ 273 (386)
T 1wue_A 213 YTLADL-PQLQRLDHYQLAMIE-------QPF-AADDFLDHAQLQRELKTRICLDENIRSLKDCQVALAL 273 (386)
T ss_dssp CCGGGH-HHHHGGGGSCCSCEE-------CCS-CTTCSHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHH
T ss_pred CCHHHH-HHHHHHHhCCCeEEe-------CCC-CcccHHHHHHHHHhcCCCEEeCCccCCHHHHHHHHHc
Confidence 888888 899999998887764 222 2457888899999999999888788899999988865
No 344
>2opj_A O-succinylbenzoate-COA synthase; TIM barrel, structural genomics, protein structure initiative; 1.60A {Thermobifida fusca} PDB: 2qvh_A*
Probab=95.13 E-value=0.076 Score=48.27 Aligned_cols=122 Identities=9% Similarity=0.131 Sum_probs=73.8
Q ss_pred CceEEEecCCCHHHHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhccc--ccEEEEeccC
Q psy4398 102 NKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLS--IPVSCKIRVF 179 (306)
Q Consensus 102 ~p~ivql~g~~~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~--~pv~vKir~g 179 (306)
.|+...+...++++..+.++ ++||..+-+.++.+ |..+..+ .+.++++|+.++ ..+.+-...+
T Consensus 70 v~~~~ti~~~~~e~~~~~~~--~~G~~~~KiKvg~~---------g~~~~~d----~~~v~avR~~~G~~~~L~vDaN~~ 134 (327)
T 2opj_A 70 VPVNATVPAVGPEEAARIVA--SSGCTTAKVKVAER---------GQSEAND----VARVEAVRDALGPRGRVRIDVNGA 134 (327)
T ss_dssp EEBCEEECSCCHHHHHHHHH--HHCCSEEEEECCC---------------CH----HHHHHHHHHHHCTTSEEEEECTTC
T ss_pred eEEeEEeCCCCHHHHHHHHH--HCCCCEEEEEeCCC---------CCCHHHH----HHHHHHHHHHhCCCCEEEEECCCC
Confidence 34445566667776544433 46999999987643 1112222 456778887763 4566666667
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHH
Q psy4398 180 HNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFS 248 (306)
Q Consensus 180 ~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~ 248 (306)
|+.+++.++++.|++.++.+|- ++. + +++..+++++.+++||.+-=.+.+..++.++++
T Consensus 135 w~~~~A~~~~~~L~~~~l~~iE-------qP~--~-~~~~~~~l~~~~~iPIa~dEs~~~~~~~~~~i~ 193 (327)
T 2opj_A 135 WDVDTAVRMIRLLDRFELEYVE-------QPC--A-TVDELAEVRRRVSVPIAADESIRRAEDPLRVRD 193 (327)
T ss_dssp SCHHHHHHHHHHHGGGCEEEEE-------CCS--S-SHHHHHHHHHHCSSCEEC-----------CTTT
T ss_pred CCHHHHHHHHHHHHhcCCcEEe-------CCC--C-CHHHHHHHHhhCCCCEEcCCCCCCHHHHHHHHH
Confidence 9999999999999998876553 222 1 467788999999999987777777777666554
No 345
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=95.02 E-value=0.017 Score=48.18 Aligned_cols=87 Identities=13% Similarity=-0.035 Sum_probs=58.9
Q ss_pred HHHHHHHHHhcccccEEEEecc--CCC-hHHHHHHHHHHHHcCCcEEEEcccC---------------------------
Q psy4398 157 ACNILTTLISNLSIPVSCKIRV--FHN-EADTIALCKRLEACGIIAIGVHGRT--------------------------- 206 (306)
Q Consensus 157 ~~eiv~~v~~~~~~pv~vKir~--g~~-~~~~~~~a~~l~~~G~d~i~v~~~~--------------------------- 206 (306)
+.++++.++++ ++|+++=+.. |.. .++.+++. +..++|+|+-+-..
T Consensus 45 L~~iv~~ik~~-gK~vivh~DlI~GLs~d~~ai~fL---~~~~pdGIIsTk~~~i~~Akk~GL~tIqR~FliDs~al~~~ 120 (188)
T 1vkf_A 45 LKFHLKILKDR-GKTVFVDMDFVNGLGEGEEAILFV---KKAGADGIITIKPKNYVVAKKNGIPAVLRFFALDSKAVERG 120 (188)
T ss_dssp HHHHHHHHHHT-TCEEEEEGGGEETCCSSHHHHHHH---HHHTCSEEEESCHHHHHHHHHTTCCEEEEEECCSHHHHHHH
T ss_pred HHHHHHHHHHC-CCeEEEecCcccccCCCHHHHHHH---HhcCCCEEEcCcHHHHHHHHHcCCEEeeEEEEEEeHHHhhh
Confidence 78899999888 9999988775 332 24566665 66788888632100
Q ss_pred ------CCC----CCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhh
Q psy4398 207 ------KAE----RPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNC 251 (306)
Q Consensus 207 ------~~~----~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v 251 (306)
.+. -..++..-+.++++ +++|+|+.|+|+|.+++++ +++|+
T Consensus 121 ~~~I~~~kPD~iEiLPg~v~p~~I~~v---~~~PiIaGGlI~t~edv~~-l~aGA 171 (188)
T 1vkf_A 121 IEQIETLGVDVVEVLPGAVAPKVARKI---PGRTVIAAGLVETEEEARE-ILKHV 171 (188)
T ss_dssp HHHHHHHTCSEEEEESGGGHHHHHTTS---TTSEEEEESCCCSHHHHHH-HTTTS
T ss_pred hhhccccCCCeEeecCCCchHHHHHHh---cCCCEEEECCcCCHHHHHH-HHCCC
Confidence 000 01122123444555 6899999999999999999 99876
No 346
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=94.95 E-value=0.48 Score=43.88 Aligned_cols=133 Identities=13% Similarity=0.167 Sum_probs=83.0
Q ss_pred ceEEEecC---CCHHHHHHHHHHHhc-CCCEEEEccCCCccccccC--------Cccccc-------cCChHHHHHHHHH
Q psy4398 103 KIILQIGT---ADPERALEAAKKVEH-DVAAIDINMGCPKQFSLTG--------GMGAAL-------LSTPDIACNILTT 163 (306)
Q Consensus 103 p~ivql~g---~~~~~~~~aa~~~~~-g~d~veln~gcP~~~~~~~--------~~G~~l-------~~~~~~~~eiv~~ 163 (306)
-+|.-++. .+.+...+.++.+++ |+|+|-+..-.|.+....+ ++|..+ +-..+...+ +..
T Consensus 30 ~IIAEiG~NH~Gsle~A~~li~~Ak~aGAdavKfQ~~k~~tl~s~~~~~fq~~~~~~~~~ye~~~~~~l~~e~~~~-L~~ 108 (385)
T 1vli_A 30 FIIAEAGINHDGKLDQAFALIDAAAEAGADAVKFQMFQADRMYQKDPGLYKTAAGKDVSIFSLVQSMEMPAEWILP-LLD 108 (385)
T ss_dssp EEEEEEETTTTTCHHHHHHHHHHHHHHTCSEEEECCBCGGGGTSCCC---------CCCHHHHGGGBSSCGGGHHH-HHH
T ss_pred EEEEeecCcccccHHHHHHHHHHHHHhCCCEEeeeeeccCcccCcchhhhccCCCCCccHHHHHHhcCCCHHHHHH-HHH
Confidence 35555643 356666777776764 9999999776654421111 122111 112233333 344
Q ss_pred HHhcccccEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHH
Q psy4398 164 LISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDY 243 (306)
Q Consensus 164 v~~~~~~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~ 243 (306)
..+..+++++.-. ++ .+.+ +.+++.|+|.+-|..+.. .|+++++.+.+ ++.|||.+-|..|++++
T Consensus 109 ~~~~~Gi~~~stp---fD-~~sv---d~l~~~~vd~~KIgS~~~-------~N~pLL~~va~-~gKPViLStGmaTl~Ei 173 (385)
T 1vli_A 109 YCREKQVIFLSTV---CD-EGSA---DLLQSTSPSAFKIASYEI-------NHLPLLKYVAR-LNRPMIFSTAGAEISDV 173 (385)
T ss_dssp HHHHTTCEEECBC---CS-HHHH---HHHHTTCCSCEEECGGGT-------TCHHHHHHHHT-TCSCEEEECTTCCHHHH
T ss_pred HHHHcCCcEEEcc---CC-HHHH---HHHHhcCCCEEEECcccc-------cCHHHHHHHHh-cCCeEEEECCCCCHHHH
Confidence 4445576654321 23 2233 445678999999876642 48899999986 58999999999999999
Q ss_pred HHHHHhhh
Q psy4398 244 GGVFSLNC 251 (306)
Q Consensus 244 ~~~l~~~v 251 (306)
..+++...
T Consensus 174 ~~Ave~i~ 181 (385)
T 1vli_A 174 HEAWRTIR 181 (385)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99988754
No 347
>3elf_A Fructose-bisphosphate aldolase; zinc enzyme, dihydroxyacetone, glyceraldehyd phosphate, aldol condensation, glycolysis, lyase; HET: 2FP; 1.31A {Mycobacterium tuberculosis} PDB: 3ekz_A* 3ekl_A* 4a22_A* 4a21_A*
Probab=94.86 E-value=0.45 Score=43.51 Aligned_cols=142 Identities=13% Similarity=0.087 Sum_probs=89.2
Q ss_pred CCCCCceEEEecCCCHH---HHHH-----HHHHHh----cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHH
Q psy4398 98 PREKNKIILQIGTADPE---RALE-----AAKKVE----HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLI 165 (306)
Q Consensus 98 ~~~~~p~ivql~g~~~~---~~~~-----aa~~~~----~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~ 165 (306)
++.+.|+++++-+.... .|.+ ..+.++ .||.-|.+..|. -.++++.+...++++...
T Consensus 84 ~~~~VPVaLHlDHg~~~~ld~~~~~~l~~~~~~i~~~i~~GFtSVMiDgS~-----------lp~eENi~~Tk~vv~~ah 152 (349)
T 3elf_A 84 AKYPVNVALHTDHCPKDKLDSYVRPLLAISAQRVSKGGNPLFQSHMWDGSA-----------VPIDENLAIAQELLKAAA 152 (349)
T ss_dssp TTSSSCEEEEECCCCGGGGGGTHHHHHHHHHHHHHTTCCCSCSEEEECCTT-----------SCHHHHHHHHHHHHHHHH
T ss_pred HHCCCCEEEECCCCCCcccchhhhhhHHHHHHHHHHHhhcCCCEEEecCCC-----------CCHHHHHHHHHHHHHHHH
Confidence 34578999999876532 2222 122222 379999996553 134567788888888775
Q ss_pred hcccccEEEEecc-CCC------------hHHHHHHHHHHHHcC-----CcEEEEcccCCCCCCC-C--CCcHHHHHHHH
Q psy4398 166 SNLSIPVSCKIRV-FHN------------EADTIALCKRLEACG-----IIAIGVHGRTKAERPR-H--RNRIEMIRTLT 224 (306)
Q Consensus 166 ~~~~~pv~vKir~-g~~------------~~~~~~~a~~l~~~G-----~d~i~v~~~~~~~~~~-~--p~~~~~v~~i~ 224 (306)
+ .++.|-.-+.. |.. ..+..+..+.+++.| +|.|-+.=.+.-+.|. + ..+++.+++|+
T Consensus 153 ~-~gvsVEaElG~iGG~Edgv~~~~~~~~yT~Peea~~Fv~~tg~~~~gvD~LAvaiGt~HG~Yk~g~p~L~~~~L~~I~ 231 (349)
T 3elf_A 153 A-AKIILEIEIGVVGGEEDGVANEINEKLYTSPEDFEKTIEALGAGEHGKYLLAATFGNVHGVYKPGNVKLRPDILAQGQ 231 (349)
T ss_dssp H-TTCEEEEEESCCBC-------------CCCHHHHHHHHHHHTTSTTSCEEEEECSSCBSSCCCTTSSCCCTHHHHHHH
T ss_pred H-cCCeEEEEeeccccccCCcccccccccCCCHHHHHHHHHHhCCCCCCceEEEEecCCcccCCCCCCCccCHHHHHHHH
Confidence 5 36666666553 110 012334444445556 8999875444444443 1 34788888888
Q ss_pred hhC-----------CCcEEEecCCCC-HHHHHHHHHhhh
Q psy4398 225 QHL-----------KIPVIANGGSKE-IVDYGGVFSLNC 251 (306)
Q Consensus 225 ~~~-----------~ipvia~GGI~s-~~~~~~~l~~~v 251 (306)
+.+ ++|++.-||-.+ .++.+++++.|+
T Consensus 232 ~~v~~~~~~~~~~~~vpLVlHGgSG~p~e~i~~ai~~GV 270 (349)
T 3elf_A 232 QVAAAKLGLPADAKPFDFVFHGGSGSLKSEIEEALRYGV 270 (349)
T ss_dssp HHHHHHHTCCTTCCCCCEEECCCTTCCHHHHHHHHHTTE
T ss_pred HHHHhhcCCccccCCCcEEEeCCCCCCHHHHHHHHHcCC
Confidence 876 689999999765 457788888765
No 348
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=94.84 E-value=0.078 Score=47.57 Aligned_cols=66 Identities=15% Similarity=0.118 Sum_probs=50.6
Q ss_pred HHHHHHHHHcCCcEEEEc-----ccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhh
Q psy4398 186 IALCKRLEACGIIAIGVH-----GRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNC 251 (306)
Q Consensus 186 ~~~a~~l~~~G~d~i~v~-----~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v 251 (306)
.++|+..+++|+++|.+- .....+......++++++++++.+++||++-+++...++++.+.+.|+
T Consensus 31 ~e~A~~ye~~GA~~lsvLe~~~~Di~~~~g~~R~~~~~~i~~i~~~v~iPvl~k~~i~~ide~qil~aaGA 101 (297)
T 4adt_A 31 VEQAKIAEKAGAIGVMILENIPSELRNTDGVARSVDPLKIEEIRKCISINVLAKVRIGHFVEAQILEELKV 101 (297)
T ss_dssp HHHHHHHHHHTCSEEEECCCCC-----CCCCCCCCCHHHHHHHHTTCCSEEEEEEETTCHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCEEEEecCCCCcchhcCCcccCCCHHHHHHHHHhcCCCEEEeccCCcHHHHHHHHHcCC
Confidence 488999999999999875 222222211224789999999999999999988888999998888776
No 349
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=94.83 E-value=0.33 Score=41.36 Aligned_cols=121 Identities=9% Similarity=0.032 Sum_probs=72.8
Q ss_pred HHHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEeccCCChHHHHHHHHHHHHcCCcE
Q psy4398 121 KKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIA 199 (306)
Q Consensus 121 ~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~a~~l~~~G~d~ 199 (306)
..+. .|+|+|-|..+- |+- ..+.+.+.++..++. +..+.+=+. ...+ .+.+.+.|.+.
T Consensus 76 ~~~~~~Gad~Vll~~se-----r~l--------~~~e~~~~~~~a~~~-Gl~~iv~v~--~~~e-----~~~~~~~~~~~ 134 (219)
T 2h6r_A 76 EAIKDCGCKGTLINHSE-----KRM--------LLADIEAVINKCKNL-GLETIVCTN--NINT-----SKAVAALSPDC 134 (219)
T ss_dssp HHHHHHTCCEEEESBTT-----BCC--------BHHHHHHHHHHHHHH-TCEEEEEES--SSHH-----HHHHTTTCCSE
T ss_pred HHHHHcCCCEEEECCcc-----ccC--------CHHHHHHHHHHHHHC-CCeEEEEeC--CchH-----HHHHHhCCCCE
Confidence 3344 499999994220 000 112356666666543 666666666 3322 24455678888
Q ss_pred EEEcccCCC--C---CCCCCCcH-HHHHHHHhhC-CCcEEEecCCCCHHHHHHHHHh---hhhhccccCCCCC
Q psy4398 200 IGVHGRTKA--E---RPRHRNRI-EMIRTLTQHL-KIPVIANGGSKEIVDYGGVFSL---NCAFLRNHYPVEK 262 (306)
Q Consensus 200 i~v~~~~~~--~---~~~~p~~~-~~v~~i~~~~-~ipvia~GGI~s~~~~~~~l~~---~v~vGrall~~p~ 262 (306)
|-+..+..- + ....+..+ ...+.+++.. ++||++-|||++.++++.+.+. ++.+|++++.-+.
T Consensus 135 i~~~~~~~iGtG~~~~t~~~~~~~~~~~~ir~~~~~~~ii~ggGI~~~~~~~~~~~~gaDgvlVGsAi~~~~d 207 (219)
T 2h6r_A 135 IAVEPPELIGTGIPVSKANPEVVEGTVRAVKEINKDVKVLCGAGISKGEDVKAALDLGAEGVLLASGVVKAKN 207 (219)
T ss_dssp EEECCCC--------------CSHHHHHHHHHHCTTCEEEECSSCCSHHHHHHHHTTTCCCEEESHHHHTCSS
T ss_pred EEEEeccccccCCCCccCCHHHHHHHHHHHHhccCCCeEEEEeCcCcHHHHHHHhhCCCCEEEEcHHHhCccc
Confidence 888876531 1 11112223 3445556555 7999999999999999998876 4599999986443
No 350
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=94.83 E-value=0.27 Score=44.00 Aligned_cols=133 Identities=7% Similarity=0.057 Sum_probs=82.3
Q ss_pred CCHHHHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEecc--C------CCh
Q psy4398 111 ADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRV--F------HNE 182 (306)
Q Consensus 111 ~~~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~--g------~~~ 182 (306)
.+.+++..+ ++.|++.|.+-.++-. ...+...+-...+..+.+.++++..++. +..|.+-+.. + .++
T Consensus 84 ~~~~~i~~a---~~aG~~~v~i~~~~s~-~~~~~~~~~s~ee~l~~~~~~v~~a~~~-G~~V~~~l~~~~~~e~~~~~~~ 158 (302)
T 2ftp_A 84 PNLKGFEAA---LESGVKEVAVFAAASE-AFSQRNINCSIKDSLERFVPVLEAARQH-QVRVRGYISCVLGCPYDGDVDP 158 (302)
T ss_dssp CSHHHHHHH---HHTTCCEEEEEEESCH-HHHHHHHSSCHHHHHHHHHHHHHHHHHT-TCEEEEEEECTTCBTTTBCCCH
T ss_pred CCHHHHHHH---HhCCcCEEEEEEecCH-HHHHHHhCCCHHHHHHHHHHHHHHHHHC-CCeEEEEEEEEeeCCcCCCCCH
Confidence 455444333 3359999888444311 1112223334555667777777777664 5555444432 1 356
Q ss_pred HHHHHHHHHHHHcCCcEEEEcccCCCCCCCCC-CcHHHHHHHHhhC-CCcEEEec--CCCC-HHHHHHHHHhhh
Q psy4398 183 ADTIALCKRLEACGIIAIGVHGRTKAERPRHR-NRIEMIRTLTQHL-KIPVIANG--GSKE-IVDYGGVFSLNC 251 (306)
Q Consensus 183 ~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p-~~~~~v~~i~~~~-~ipvia~G--GI~s-~~~~~~~l~~~v 251 (306)
+...++++.+.+.|+|.|.+.+.... ..| ...++++.+++.+ ++|+-..+ +-.- ..+...+++.|+
T Consensus 159 ~~~~~~~~~~~~~G~d~i~l~DT~G~---~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~An~laAv~aGa 229 (302)
T 2ftp_A 159 RQVAWVARELQQMGCYEVSLGDTIGV---GTAGATRRLIEAVASEVPRERLAGHFHDTYGQALANIYASLLEGI 229 (302)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEESSSC---CCHHHHHHHHHHHTTTSCGGGEEEEEBCTTSCHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCCC---cCHHHHHHHHHHHHHhCCCCeEEEEeCCCccHHHHHHHHHHHhCC
Confidence 77999999999999999998744321 223 2467889999998 68988876 4332 455666677765
No 351
>3pfr_A Mandelate racemase/muconate lactonizing protein; emolase superfamily fold, D-glucarate dehydratase, D-glucara isomerase; HET: GKR; 1.90A {Actinobacillus succinogenes} PDB: 3n6j_A 3n6h_A* 4gyp_C*
Probab=94.83 E-value=0.27 Score=46.74 Aligned_cols=144 Identities=12% Similarity=0.117 Sum_probs=95.5
Q ss_pred CCHHHHHHHHHHH-h-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc-cccEEEEeccCCChHHHHH
Q psy4398 111 ADPERALEAAKKV-E-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL-SIPVSCKIRVFHNEADTIA 187 (306)
Q Consensus 111 ~~~~~~~~aa~~~-~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~g~~~~~~~~ 187 (306)
.+++++++.++.+ + .||..+-+.+|.+. ++.-.+.++++|++. +..+.+-...+|+.+++.+
T Consensus 184 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~~---------------~~~Di~~v~avRea~pd~~L~vDaN~~w~~~~A~~ 248 (455)
T 3pfr_A 184 MDTQAVIELAAASKDRYGFKDFKLKGGVFE---------------GSKEIDTVIELKKHFPDARITLDPNGCWSLDEAIQ 248 (455)
T ss_dssp CSHHHHHHHHHHHHHHHCCSCEEEECSSSC---------------HHHHHHHHHHHHHHCTTCCEEEECTTBSCHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCEEEEcCCCCC---------------HHHHHHHHHHHHHhCCCCeEeecCCCCCCHHHHHH
Confidence 5788888877754 4 49999999876422 222345678888876 4556666666799999999
Q ss_pred HHHHHHHcCCcEEEEcccCCCCCCCCCCc----HHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhh-hhccccCCCCC
Q psy4398 188 LCKRLEACGIIAIGVHGRTKAERPRHRNR----IEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNC-AFLRNHYPVEK 262 (306)
Q Consensus 188 ~a~~l~~~G~d~i~v~~~~~~~~~~~p~~----~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v-~vGrall~~p~ 262 (306)
+++.+++. +.+|- ++. .+.+ ++..+++++.+++||.+.=-+.+..++.++++.+. .+ +.-++.
T Consensus 249 ~~~~L~~~-l~~iE-------eP~-~~~d~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~di---~~~d~~ 316 (455)
T 3pfr_A 249 LCKGLNDV-LTYAE-------DPC-IGENGYSGREIMAEFRRRTGIPTATNMIATNWREMCHAIMLQSVDI---PLADPH 316 (455)
T ss_dssp HHTTCTTT-CSEEE-------SCB-CCBTTBCHHHHHHHHHHHHCCCEEESSSCCSHHHHHHHHHHTCCSE---EBCCHH
T ss_pred HHHhhccc-ceeee-------cCC-ChhhccchHHHHHHHHhcCCCCEEeCCCcCCHHHHHHHHHcCCCCE---EEecCC
Confidence 99999877 66552 222 2223 68889999999999887545677888888887532 11 111220
Q ss_pred ---c-hHHHHHHHHHhcCCCCCc
Q psy4398 263 ---L-PKTILYAHCKYKRFEVPK 281 (306)
Q Consensus 263 ---~-~~~~l~~~~~~~g~~~~~ 281 (306)
+ .-+.+.+..+++|++..+
T Consensus 317 ~GGit~a~kia~lA~a~gv~~~~ 339 (455)
T 3pfr_A 317 FWTLTGASRVAQLCNEWGLTWGC 339 (455)
T ss_dssp HHCHHHHHHHHHHHHHTTCCCBC
T ss_pred cCCHHHHHHHHHHHHHcCCEEEe
Confidence 1 113666777888887444
No 352
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=94.82 E-value=0.37 Score=42.20 Aligned_cols=91 Identities=19% Similarity=0.157 Sum_probs=68.2
Q ss_pred ceEEEecCCCHHHHHHHHHHH-hcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc-cccEEEEecc--
Q psy4398 103 KIILQIGTADPERALEAAKKV-EHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL-SIPVSCKIRV-- 178 (306)
Q Consensus 103 p~ivql~g~~~~~~~~aa~~~-~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~-- 178 (306)
.+++.|.+.+.++..+.++.+ ..|+|.||+ |-|.+.. ..+.+.+.+.+..+++.+ +.|+.+=+|.
T Consensus 21 ~Icv~l~~~~~~e~~~~~~~~~~~~~D~vEl---------RvD~l~~--~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~ 89 (257)
T 2yr1_A 21 CICAPVVGEDDRKVLREAEEVCRKQPDLLEW---------RADFFRA--IDDQERVLATANGLRNIAGEIPILFTIRSER 89 (257)
T ss_dssp EEEEEECCSSHHHHHHHHHHHHHSCCSEEEE---------EGGGCTT--TTCHHHHHHHHHHHHHHSSSCCEEEECCCTT
T ss_pred EEEEEecCCCHHHHHHHHHHHhhcCCCEEEE---------Eeecccc--cCcHHHHHHHHHHHHHhccCCCEEEEEeecc
Confidence 488899999999987666664 459999999 4343321 124677888999999887 7899998885
Q ss_pred --C----CChHHHHHHHHHHHHcC-CcEEEEcc
Q psy4398 179 --F----HNEADTIALCKRLEACG-IIAIGVHG 204 (306)
Q Consensus 179 --g----~~~~~~~~~a~~l~~~G-~d~i~v~~ 204 (306)
| .+.++..++.+.+.+.| +|+|.|.-
T Consensus 90 eGG~~~~~~~~~~~~ll~~~~~~g~~d~iDvEl 122 (257)
T 2yr1_A 90 EGGQPIPLNEAEVRRLIEAICRSGAIDLVDYEL 122 (257)
T ss_dssp TTCCCCSSCHHHHHHHHHHHHHHTCCSEEEEEG
T ss_pred cCCCCCCCCHHHHHHHHHHHHHcCCCCEEEEEC
Confidence 1 13455778888888888 99999853
No 353
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=94.80 E-value=0.71 Score=40.48 Aligned_cols=125 Identities=9% Similarity=0.113 Sum_probs=84.5
Q ss_pred ceEE-EecC-CCHHHHHHHHHHHhc-CCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEeccC
Q psy4398 103 KIIL-QIGT-ADPERALEAAKKVEH-DVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVF 179 (306)
Q Consensus 103 p~iv-ql~g-~~~~~~~~aa~~~~~-g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g 179 (306)
+++| ..++ .+.+...+.++.+++ |++.|-...--|.+.. .+|-+ + - +.-.+.++.+++..++|+..-+-
T Consensus 24 ~~vIAgpc~~~~~e~a~~~a~~l~~~Ga~~vk~~~fkprts~--~~~~g-~--~-~egl~~l~~~~~~~Gl~~~te~~-- 95 (262)
T 1zco_A 24 FTIIAGPCSIESREQIMKVAEFLAEVGIKVLRGGAFKPRTSP--YSFQG-Y--G-EKALRWMREAADEYGLVTVTEVM-- 95 (262)
T ss_dssp CEEEEECSBCCCHHHHHHHHHHHHHTTCCEEECBSSCCCSST--TSCCC-C--T-HHHHHHHHHHHHHHTCEEEEECC--
T ss_pred cEEEEeCCCCCCHHHHHHHHHHHHHcCCCEEEEEecccCCCc--ccccC-c--c-HHHHHHHHHHHHHcCCcEEEeeC--
Confidence 4444 3543 367888888888875 9999988766664321 11211 1 1 33344556666777888887655
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCC-CHHHHHHHHHh
Q psy4398 180 HNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSK-EIVDYGGVFSL 249 (306)
Q Consensus 180 ~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~-s~~~~~~~l~~ 249 (306)
+... ++.+++. +|.+-|.+++. .++++++++.+ ++.||+..-|.. +++++.++++.
T Consensus 96 -d~~~----~~~l~~~-vd~~kIga~~~-------~n~~ll~~~a~-~~kPV~lk~G~~~t~~e~~~Av~~ 152 (262)
T 1zco_A 96 -DTRH----VELVAKY-SDILQIGARNS-------QNFELLKEVGK-VENPVLLKRGMGNTIQELLYSAEY 152 (262)
T ss_dssp -CGGG----HHHHHHH-CSEEEECGGGT-------TCHHHHHHHTT-SSSCEEEECCTTCCHHHHHHHHHH
T ss_pred -CHHh----HHHHHhh-CCEEEECcccc-------cCHHHHHHHHh-cCCcEEEecCCCCCHHHHHHHHHH
Confidence 3333 3445566 89999987753 36678888887 799999999997 99999998875
No 354
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=94.78 E-value=0.33 Score=44.77 Aligned_cols=89 Identities=15% Similarity=0.103 Sum_probs=64.2
Q ss_pred HHHHhcccccEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcccCCC------------------------C-------C
Q psy4398 162 TTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKA------------------------E-------R 210 (306)
Q Consensus 162 ~~v~~~~~~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~------------------------~-------~ 210 (306)
+.+.+..+.|.++.+-.+.+.+...++++.++++|++.|.++-.... . .
T Consensus 115 eev~~~~~~~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~it~d~p~~g~r~~d~r~~~~~p~~~~~~~~~~~~~~~~~~ 194 (370)
T 1gox_A 115 EEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPFLTLKNFEGIDLGKMDK 194 (370)
T ss_dssp HHHHTTCCCCEEEEECCBSSHHHHHHHHHHHHHTTCCEEEEECSCSSCCCCHHHHHTTCCCCTTCCCGGGSSSCCC----
T ss_pred HHHHhhcCCCceEEEecCCCchHHHHHHHHHHHCCCCEEEEeCCCCcccccHHHHHhccCCCcccchhhhhhhhhhcccc
Confidence 33344434678888765567777889999999999999987532110 0 0
Q ss_pred ------------C-CCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhh
Q psy4398 211 ------------P-RHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNC 251 (306)
Q Consensus 211 ------------~-~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v 251 (306)
. .....|+.++++++.+++||+ .+++.++++++.+.+.|+
T Consensus 195 ~~g~~~~~~v~~~~~~~~~~~~i~~l~~~~~~pv~-vK~~~~~e~a~~a~~~Ga 247 (370)
T 1gox_A 195 ANDSGLSSYVAGQIDRSLSWKDVAWLQTITSLPIL-VKGVITAEDARLAVQHGA 247 (370)
T ss_dssp -----HHHHHHHTBCTTCCHHHHHHHHHHCCSCEE-EECCCSHHHHHHHHHTTC
T ss_pred ccCccHHHHHHhhcCccchHHHHHHHHHHhCCCEE-EEecCCHHHHHHHHHcCC
Confidence 0 112367889999999999998 477899999999998865
No 355
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=94.72 E-value=0.29 Score=44.83 Aligned_cols=116 Identities=14% Similarity=0.081 Sum_probs=80.0
Q ss_pred eeecCCCCCCceEEEecCCCHHHHHHHHHHHhc-CCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhccccc
Q psy4398 93 VFRTCPREKNKIILQIGTADPERALEAAKKVEH-DVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIP 171 (306)
Q Consensus 93 ~~~~~~~~~~p~ivql~g~~~~~~~~aa~~~~~-g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~p 171 (306)
+.+.+.+.|.+++-..+... .+..+.+ ++|.+.| |+.-+++..++.++. ..+.|
T Consensus 83 L~~~~~~~Gi~~~st~fD~~------svd~l~~~~v~~~KI--------------~S~~~~N~pLL~~va-----~~gKP 137 (350)
T 3g8r_A 83 LVAEMKANGFKAICTPFDEE------SVDLIEAHGIEIIKI--------------ASCSFTDWPLLERIA-----RSDKP 137 (350)
T ss_dssp HHHHHHHTTCEEEEEECSHH------HHHHHHHTTCCEEEE--------------CSSSTTCHHHHHHHH-----TSCSC
T ss_pred HHHHHHHcCCcEEeccCCHH------HHHHHHHcCCCEEEE--------------CcccccCHHHHHHHH-----hhCCc
Confidence 44455556777776664322 2233333 6788877 333456666655543 36999
Q ss_pred EEEEeccCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhC-CCcEEEe
Q psy4398 172 VSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHL-KIPVIAN 234 (306)
Q Consensus 172 v~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~-~ipvia~ 234 (306)
|.+|.... +.+++...++.+.+.|.+.+.+|+.+.-..+....|+..+..+++.+ ++||..+
T Consensus 138 viLstGms-tl~Ei~~Ave~i~~~g~~viLlhC~s~YPt~~~~~nL~aI~~Lk~~fp~lpVG~S 200 (350)
T 3g8r_A 138 VVASTAGA-RREDIDKVVSFMLHRGKDLTIMHCVAEYPTPDDHLHLARIKTLRQQYAGVRIGYS 200 (350)
T ss_dssp EEEECTTC-CHHHHHHHHHHHHTTTCCEEEEECCCCSSCCGGGCCTTHHHHHHHHCTTSEEEEE
T ss_pred EEEECCCC-CHHHHHHHHHHHHHcCCCEEEEecCCCCCCCcccCCHHHHHHHHHHCCCCCEEcC
Confidence 99999975 88889999999998898877778764332223346899999999999 8999777
No 356
>4g8t_A Glucarate dehydratase; enolase, enzyme function INI EFI, structural genomics, lyase; 1.70A {Actinobacillus succinogenes} PDB: 1ec7_A 1ec8_A* 1ec9_A* 1ecq_A* 1jdf_A* 3pwi_A* 1jct_A* 3pwg_A* 1bqg_A
Probab=94.68 E-value=0.32 Score=46.27 Aligned_cols=144 Identities=11% Similarity=0.110 Sum_probs=94.3
Q ss_pred CHHHHHHHHHHH-hc-CCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc-cccEEEEeccCCChHHHHHH
Q psy4398 112 DPERALEAAKKV-EH-DVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL-SIPVSCKIRVFHNEADTIAL 188 (306)
Q Consensus 112 ~~~~~~~aa~~~-~~-g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~g~~~~~~~~~ 188 (306)
++++..+.++.. .+ ||+.+-+..|.. +++.-.+.++++|+++ +.++.+-...+|+.++++++
T Consensus 202 ~~~~~~~~~~~~~~~~Gf~~~KlKvG~~---------------~~~~di~~v~avrea~pd~~L~vDaN~~wt~~~Ai~~ 266 (464)
T 4g8t_A 202 TPESVVRLAEAAYEKYGFNDFKLKGGVL---------------DGFEEAEAVTALAKRFPDARITLDPNGAWSLDEAVKI 266 (464)
T ss_dssp SHHHHHHHHHHHHHHHCCSCEEEECSSS---------------CHHHHHHHHHHHHHHSTTCCEEEECTTCBCHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCeEEEeCCCC---------------CHHHHHHHHHHHHhhCCCceEEEECCCccCHHHHHHH
Confidence 455555544433 34 999999986642 2333456778888877 45566666667999999999
Q ss_pred HHHHHHcCCcEEEEcccCCCCCCCC---CCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhh-hhccccCCCCC--
Q psy4398 189 CKRLEACGIIAIGVHGRTKAERPRH---RNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNC-AFLRNHYPVEK-- 262 (306)
Q Consensus 189 a~~l~~~G~d~i~v~~~~~~~~~~~---p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v-~vGrall~~p~-- 262 (306)
++.+++. +.++- ++... ....+..+++++.+++||.+.=.+.+..++.++++.+. .+ +..|+.
T Consensus 267 ~~~le~~-l~wiE-------eP~~~~d~~~~~e~~a~lr~~~~iPIa~gE~~~~~~~~~~~i~~~avdi---~~~d~~~G 335 (464)
T 4g8t_A 267 GKQLKGV-LAYAE-------DPCGAEQGYSGREIMAEFRRATGLPTATNMIATDWRQMGHTISLQSVDI---PLADPHFW 335 (464)
T ss_dssp HHHTTTT-CSCEE-------SCBCCBTTBCHHHHHHHHHHHHCCCEEESSSSCSHHHHHHHHHHTCCSE---EBCCHHHH
T ss_pred HHHhhhc-cceee-------cCcCcccccchHHHHHhhhccCCCCccccccccchhhHHHHHHhhCCCE---Eecccccc
Confidence 9999865 55442 11111 12357789999999999998888999999999988642 21 112221
Q ss_pred --chHHHHHHHHHhcCCCCCc
Q psy4398 263 --LPKTILYAHCKYKRFEVPK 281 (306)
Q Consensus 263 --~~~~~l~~~~~~~g~~~~~ 281 (306)
..-+.+.+..+..|+++..
T Consensus 336 Git~~~kia~lA~~~gi~v~~ 356 (464)
T 4g8t_A 336 TMQGSIRVAQMCHEWGLTWGS 356 (464)
T ss_dssp CHHHHHHHHHHHHHHTCCCBC
T ss_pred chHHHHHHHHHHHHcCCEEEE
Confidence 1112666777888887443
No 357
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=94.57 E-value=0.51 Score=43.22 Aligned_cols=82 Identities=15% Similarity=0.198 Sum_probs=60.2
Q ss_pred cccccCChHHHHHHHHHHHhcccccEEEEeccCCChHHHHHHHHHHHHcCCcEEEE--cccCCCCCC-CCCCcHHHHHHH
Q psy4398 147 GAALLSTPDIACNILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGV--HGRTKAERP-RHRNRIEMIRTL 223 (306)
Q Consensus 147 G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v--~~~~~~~~~-~~p~~~~~v~~i 223 (306)
|+..+++..++.++. ..++||.+|-....+.+++...++.+...|..-+++ +|...-..| ....++..+..+
T Consensus 196 gAr~~~n~~LL~~va-----~~~kPVilk~G~~~tl~ei~~Ave~i~~~GN~~viLceRG~~typ~~~~~~vdl~ai~~l 270 (350)
T 1vr6_A 196 GARNAQNFRLLSKAG-----SYNKPVLLKRGFMNTIEEFLLSAEYIANSGNTKIILCERGIRTFEKATRNTLDISAVPII 270 (350)
T ss_dssp CGGGTTCHHHHHHHH-----TTCSCEEEECCTTCCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHH
T ss_pred CcccccCHHHHHHHH-----ccCCcEEEcCCCCCCHHHHHHHHHHHHHCCCCeEEEEeCCCCCCCCcChhhhhHHHHHHH
Confidence 556667777666654 468999999997668889999999999999855554 343222233 344688888999
Q ss_pred HhhCCCcEEE
Q psy4398 224 TQHLKIPVIA 233 (306)
Q Consensus 224 ~~~~~ipvia 233 (306)
++.+++||++
T Consensus 271 k~~~~lpVi~ 280 (350)
T 1vr6_A 271 RKESHLPILV 280 (350)
T ss_dssp HHHBSSCEEE
T ss_pred HHhhCCCEEE
Confidence 9998999866
No 358
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=94.55 E-value=0.22 Score=43.03 Aligned_cols=90 Identities=16% Similarity=0.164 Sum_probs=62.2
Q ss_pred ceEEEecC-CCHHHHHHHHHHHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc-cccEEEEecc-
Q psy4398 103 KIILQIGT-ADPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL-SIPVSCKIRV- 178 (306)
Q Consensus 103 p~ivql~g-~~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~- 178 (306)
.+++.|.+ .+.++..+.++.+. .|+|.||+ |-|.+.. .+.+.+.+.++.+|+.. +.|+.+=+|.
T Consensus 5 ~Icvpi~~~~~~~e~~~~~~~~~~~~~D~vEl---------RvD~l~~---~~~~~v~~~~~~lr~~~~~~PiI~T~R~~ 72 (238)
T 1sfl_A 5 EVVATITPQLSIEETLIQKINHRIDAIDVLEL---------RIDQFEN---VTVDQVAEMITKLKVMQDSFKLLVTYRTK 72 (238)
T ss_dssp EEEEEECCCC---CHHHHHHHHTTTTCSEEEE---------ECTTSTT---CCHHHHHHHHHHHC---CCSEEEEECCBG
T ss_pred eEEEEecCCCCHHHHHHHHHHhhhcCCCEEEE---------Eeccccc---CCHHHHHHHHHHHHHhccCCCEEEEeecc
Confidence 57888999 88888777666665 49999999 4443321 14677888899998877 7899998886
Q ss_pred --C----CChHHHHHHHHHHHHc-CCcEEEEcc
Q psy4398 179 --F----HNEADTIALCKRLEAC-GIIAIGVHG 204 (306)
Q Consensus 179 --g----~~~~~~~~~a~~l~~~-G~d~i~v~~ 204 (306)
| .+.++..++.+.+.+. ++|+|.|.-
T Consensus 73 ~eGG~~~~~~~~~~~ll~~~~~~~~~d~iDvEl 105 (238)
T 1sfl_A 73 LQGGYGQFTNDSYLNLISDLANINGIDMIDIEW 105 (238)
T ss_dssp GGTSCBCCCHHHHHHHHHHGGGCTTCCEEEEEC
T ss_pred ccCCCCCCCHHHHHHHHHHHHHhCCCCEEEEEc
Confidence 2 2345577888888776 699999853
No 359
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=94.54 E-value=0.047 Score=49.08 Aligned_cols=84 Identities=10% Similarity=0.035 Sum_probs=55.3
Q ss_pred HHHHHHHHhccc--ccEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhC-----CCc
Q psy4398 158 CNILTTLISNLS--IPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHL-----KIP 230 (306)
Q Consensus 158 ~eiv~~v~~~~~--~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~-----~ip 230 (306)
.+-++++++..+ .++.+-+. +.+ -++.+.++|+|+|-++.. ..+.++++++.+ ++|
T Consensus 184 ~~ai~~~r~~~~~~~~i~vev~---tle----e~~~A~~aGaD~I~ld~~----------~~~~l~~~v~~l~~~~~~~~ 246 (299)
T 2jbm_A 184 EKAVRAARQAADFALKVEVECS---SLQ----EAVQAAEAGADLVLLDNF----------KPEELHPTATVLKAQFPSVA 246 (299)
T ss_dssp HHHHHHHHHHHTTTSCEEEEES---SHH----HHHHHHHTTCSEEEEESC----------CHHHHHHHHHHHHHHCTTSE
T ss_pred HHHHHHHHHhCCcCCeEEEecC---CHH----HHHHHHHcCCCEEEECCC----------CHHHHHHHHHHhhccCCCee
Confidence 456666666654 34555443 222 234444689999998652 235555444444 389
Q ss_pred EEEecCCCCHHHHHHHHHhhh---hhccccCC
Q psy4398 231 VIANGGSKEIVDYGGVFSLNC---AFLRNHYP 259 (306)
Q Consensus 231 via~GGI~s~~~~~~~l~~~v---~vGrall~ 259 (306)
|.++||| +.+++.++.+.|+ .+|+.++.
T Consensus 247 I~ASGGI-t~~ni~~~~~aGaD~i~vGs~i~~ 277 (299)
T 2jbm_A 247 VEASGGI-TLDNLPQFCGPHIDVISMGMLTQA 277 (299)
T ss_dssp EEEESSC-CTTTHHHHCCTTCCEEECTHHHHS
T ss_pred EEEECCC-CHHHHHHHHHCCCCEEEEChhhcC
Confidence 9999999 7999999998876 77776654
No 360
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=94.51 E-value=1 Score=40.48 Aligned_cols=118 Identities=7% Similarity=-0.040 Sum_probs=77.8
Q ss_pred HHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEE-EeccCCChHHHHHHHHHHHHcCCc--
Q psy4398 122 KVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSC-KIRVFHNEADTIALCKRLEACGII-- 198 (306)
Q Consensus 122 ~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~v-Kir~g~~~~~~~~~a~~l~~~G~d-- 198 (306)
++++|+|.|+|+..+..+ | .....++...++++.+++.+++|+++ -.. +.+.-.+.+++..++|++
T Consensus 83 ~v~~GAdiIDIg~~StrP-------~-~~~vs~eee~~vV~~v~~~~~vplsI~DT~---~~~~~~~V~eaal~aga~~k 151 (310)
T 2h9a_B 83 CVEYGADIVALRLVSAHP-------D-GQNRSGAELAEVCKAVADAIDVPLMIIGCG---VEEKDAEIFPVIGEALSGRN 151 (310)
T ss_dssp HHHTTCSEEEEECGGGCT-------T-TTCCCHHHHHHHHHHHHHHCSSCEEEECCS---CHHHHHHHHHHHHHHTTTSC
T ss_pred HHHcCCcEEEEeCccCCC-------C-CCCCCHHHHHHHHHHHHHhCCceEEEECCC---CCCCCHHHHHHHHHhCCCCC
Confidence 445699999999864221 1 12235666677999999888999988 442 455567888888889997
Q ss_pred -EEE-EcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhhhhcc---ccCCCC
Q psy4398 199 -AIG-VHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNCAFLR---NHYPVE 261 (306)
Q Consensus 199 -~i~-v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v~vGr---all~~p 261 (306)
.|. +++. +++-+..+....+.|+|+.-- .+++.+++.++.....|= -++-||
T Consensus 152 ~iINdvs~~----------~~~~~~~~aa~~g~~vv~m~~-~dv~~l~~~~~~a~~~Gi~~e~IilDP 208 (310)
T 2h9a_B 152 CLLSSATKD----------NYKPIVATCMVHGHSVVASAP-LDINLSKQLNIMIMEMNLAPNRIIMDP 208 (310)
T ss_dssp CEEEEECTT----------THHHHHHHHHHHTCEEEEECS-SCHHHHHHHHHHHHTTTCCGGGEEEEC
T ss_pred CEEEECCCC----------ccHHHHHHHHHhCCCEEEECh-hHHHHHHHHHHHHHHCCCChhhEEEeC
Confidence 443 3321 345555666677999998763 356667666665444442 356677
No 361
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=94.50 E-value=1.3 Score=40.49 Aligned_cols=76 Identities=18% Similarity=0.217 Sum_probs=55.2
Q ss_pred HHHHHhcccccEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCH
Q psy4398 161 LTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEI 240 (306)
Q Consensus 161 v~~v~~~~~~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~ 240 (306)
+....+..+++++.-.= +. +-++.+++.|++.+-|..+.. .|+++++.+.+ ++.|||.+-|..++
T Consensus 83 L~~~~~~~Gi~~~st~f---D~----~svd~l~~~~v~~~KI~S~~~-------~N~pLL~~va~-~gKPviLstGmstl 147 (350)
T 3g8r_A 83 LVAEMKANGFKAICTPF---DE----ESVDLIEAHGIEIIKIASCSF-------TDWPLLERIAR-SDKPVVASTAGARR 147 (350)
T ss_dssp HHHHHHHTTCEEEEEEC---SH----HHHHHHHHTTCCEEEECSSST-------TCHHHHHHHHT-SCSCEEEECTTCCH
T ss_pred HHHHHHHcCCcEEeccC---CH----HHHHHHHHcCCCEEEECcccc-------cCHHHHHHHHh-hCCcEEEECCCCCH
Confidence 34444455777655433 32 224455778999999976642 48899999986 58999999999999
Q ss_pred HHHHHHHHhhh
Q psy4398 241 VDYGGVFSLNC 251 (306)
Q Consensus 241 ~~~~~~l~~~v 251 (306)
+++..++++..
T Consensus 148 ~Ei~~Ave~i~ 158 (350)
T 3g8r_A 148 EDIDKVVSFML 158 (350)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999988644
No 362
>3ekg_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, nysgrc, L-rhamnonate dehydratase,target PSI-2; HET: TLA; 1.60A {Azotobacter vinelandii avop} PDB: 2oz3_A*
Probab=94.42 E-value=0.32 Score=45.51 Aligned_cols=137 Identities=10% Similarity=0.021 Sum_probs=91.2
Q ss_pred hcCCCEEEEccCC-CccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEeccCCChHHHHHHHHHHHHcCCcEE
Q psy4398 124 EHDVAAIDINMGC-PKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIRVFHNEADTIALCKRLEACGIIAI 200 (306)
Q Consensus 124 ~~g~d~veln~gc-P~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i 200 (306)
+.||..+-+.++- |. .|. .+.+.-.+.++++|+++ ++++.+-...+|+.+++.++++.|++.++.+|
T Consensus 172 ~~Gf~~~K~Kv~~g~~-------~g~---~~~~~di~~v~avRea~G~~~~L~vDaN~~w~~~~A~~~~~~Le~~~l~~i 241 (404)
T 3ekg_A 172 KMGFIGGKMPLHHGPS-------EGE---EGLKKNLEELATMRERVGPDFWLMFDCWMSLDLNYATRLARGAREYGLKWI 241 (404)
T ss_dssp HTTCSEEEEECCCCGG-------GHH---HHHHHHHHHHHHHHHHHCSSSEEEEECTTCCCHHHHHHHHHHHGGGTCCEE
T ss_pred HcCCCEEEEecCCCCc-------ccc---ccHHHHHHHHHHHHHHhCCCCeEEecCCCCCCHHHHHHHHHHHhhcCCcEE
Confidence 4589988887542 11 011 12345567788889887 45677777778999999999999999998877
Q ss_pred EEcccCCCCCCCCCCcHHHHHHHHhhCCCcE-EEec-CCCCHHHHHHHHHhhhhhccccCCCC-Cch----HHHHHHHHH
Q psy4398 201 GVHGRTKAERPRHRNRIEMIRTLTQHLKIPV-IANG-GSKEIVDYGGVFSLNCAFLRNHYPVE-KLP----KTILYAHCK 273 (306)
Q Consensus 201 ~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipv-ia~G-GI~s~~~~~~~l~~~v~vGrall~~p-~~~----~~~l~~~~~ 273 (306)
- ++ ..+.+++..+++++.+++|| |+.| .+.+..+++++++.+. ...+--++ .+. -+.+.+..+
T Consensus 242 E-------eP-~~~~d~~~~a~l~~~~~~pi~Ia~gE~~~~~~~~~~li~~~a--~dii~~d~~~~GGitea~kia~lA~ 311 (404)
T 3ekg_A 242 E-------EA-LPPDDYWGYAELRRNAPTGMMVTTGEHEATRWGFRMLLEMGC--CDIIQPDVGWCGGVTELLKISALAD 311 (404)
T ss_dssp E-------CC-SCTTCHHHHHHHHHHSCTTCEEEECTTCCHHHHHHHHHHTTC--CSEECCCTTTTTHHHHHHHHHHHHH
T ss_pred e-------cC-CCcccHHHHHHHHHhcCCCeEEEecCccCCHHHHHHHHHcCC--CCeEecChhhcCCccHHHHHHHHHH
Confidence 4 22 23458899999999998885 4544 4778888888877532 00111122 221 126677788
Q ss_pred hcCCCCC
Q psy4398 274 YKRFEVP 280 (306)
Q Consensus 274 ~~g~~~~ 280 (306)
++|+++.
T Consensus 312 a~gv~v~ 318 (404)
T 3ekg_A 312 AHNALVV 318 (404)
T ss_dssp HTTCEEC
T ss_pred HcCCEEE
Confidence 8888754
No 363
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=94.34 E-value=0.077 Score=47.30 Aligned_cols=87 Identities=10% Similarity=0.061 Sum_probs=57.7
Q ss_pred HHHHHHHHHhccc--ccEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhC-----CC
Q psy4398 157 ACNILTTLISNLS--IPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHL-----KI 229 (306)
Q Consensus 157 ~~eiv~~v~~~~~--~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~-----~i 229 (306)
+.+.++++|+..+ .++.|-+. + .+-++.+.++|+|.|.++.. ..+.++++.+.+ ++
T Consensus 179 i~~av~~ar~~~~~~~~I~VEV~---t----leea~eA~~aGaD~I~LDn~----------~~e~l~~av~~l~~~~~~v 241 (285)
T 1o4u_A 179 AERAVQEVRKIIPFTTKIEVEVE---N----LEDALRAVEAGADIVMLDNL----------SPEEVKDISRRIKDINPNV 241 (285)
T ss_dssp HHHHHHHHHTTSCTTSCEEEEES---S----HHHHHHHHHTTCSEEEEESC----------CHHHHHHHHHHHHHHCTTS
T ss_pred HHHHHHHHHHhCCCCceEEEEeC---C----HHHHHHHHHcCCCEEEECCC----------CHHHHHHHHHHhhccCCCc
Confidence 4566777777653 35555443 2 34455556799999999863 224444444333 68
Q ss_pred cEEEecCCCCHHHHHHHHHhhh---hhccccCCCC
Q psy4398 230 PVIANGGSKEIVDYGGVFSLNC---AFLRNHYPVE 261 (306)
Q Consensus 230 pvia~GGI~s~~~~~~~l~~~v---~vGrall~~p 261 (306)
|+.++|||+ ++++.++.+.|+ .+|+..+.-|
T Consensus 242 ~ieASGGIt-~eni~~~a~tGVD~IsvGslt~sa~ 275 (285)
T 1o4u_A 242 IVEVSGGIT-EENVSLYDFETVDVISSSRLTLQEV 275 (285)
T ss_dssp EEEEEECCC-TTTGGGGCCTTCCEEEEGGGTSSCC
T ss_pred eEEEECCCC-HHHHHHHHHcCCCEEEEeHHHcCCC
Confidence 999999995 788888777765 8888777543
No 364
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=94.33 E-value=0.45 Score=40.18 Aligned_cols=118 Identities=15% Similarity=0.156 Sum_probs=67.5
Q ss_pred CCCHHHHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEeccCCChHHHHHHH
Q psy4398 110 TADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFHNEADTIALC 189 (306)
Q Consensus 110 g~~~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~a 189 (306)
..++++..+.++.+ +.|.|+||-. +.++.+ +.+++ ..|++--++.. +..+.
T Consensus 62 n~~~~~i~~~~~~~--~ld~vQLHG~----------------e~~~~~----~~l~~--~~~vika~~v~-~~~~l---- 112 (205)
T 1nsj_A 62 NEEPEKILDVASYV--QLNAVQLHGE----------------EPIELC----RKIAE--RILVIKAVGVS-NERDM---- 112 (205)
T ss_dssp SCCHHHHHHHHHHH--TCSEEEECSC----------------CCHHHH----HHHHT--TSEEEEEEEES-SHHHH----
T ss_pred CCCHHHHHHHHHhh--CCCEEEECCC----------------CCHHHH----HHHhc--CCCEEEEEEcC-CHHHH----
Confidence 44565555444432 7899999821 234443 33432 36777666642 22222
Q ss_pred HHHHHcCCcEEEEcccCCC-CCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHh----hhhhccccC
Q psy4398 190 KRLEACGIIAIGVHGRTKA-ERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSL----NCAFLRNHY 258 (306)
Q Consensus 190 ~~l~~~G~d~i~v~~~~~~-~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~----~v~vGrall 258 (306)
..+.+..+|++.+...... ++.....+|+++..+. ..+.|++..||++ +++..++++. ++-+.+.+=
T Consensus 113 ~~~~~~~~d~~LlD~~~~~~GGtG~~fdw~~l~~~~-~~~~p~~LAGGL~-peNV~~ai~~~~p~gVDvsSGvE 184 (205)
T 1nsj_A 113 ERALNYREFPILLDTKTPEYGGSGKTFDWSLILPYR-DRFRYLVLSGGLN-PENVRSAIDVVRPFAVDVSSGVE 184 (205)
T ss_dssp HHHGGGTTSCEEEEESCSSSSSCCSCCCGGGTGGGG-GGSSCEEEESSCC-TTTHHHHHHHHCCSEEEESGGGE
T ss_pred HHHHHcCCCEEEECCCCCCCCCCCCccCHHHHHhhh-cCCCcEEEECCCC-HHHHHHHHHhcCCCEEEECCcee
Confidence 2233344999998764421 2222346887775542 3368999999986 7777666653 566666554
No 365
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=94.28 E-value=0.46 Score=42.59 Aligned_cols=136 Identities=13% Similarity=0.088 Sum_probs=84.5
Q ss_pred CCCceEEEecCC-CHHHHHHHHHHH-----hcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEE
Q psy4398 100 EKNKIILQIGTA-DPERALEAAKKV-----EHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVS 173 (306)
Q Consensus 100 ~~~p~ivql~g~-~~~~~~~aa~~~-----~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~ 173 (306)
.+.|+++.+-+. +.+...++.+.- +.||.-|.+..+. -.++++.+...++++.... .++.|-
T Consensus 81 ~~VPVaLHlDHg~~~e~i~~ai~~~~~~~~~~GFtSVMiDgS~-----------~p~eENi~~Tk~vv~~ah~-~gvsVE 148 (306)
T 3pm6_A 81 ASVPITLHLDHAQDPEIIKRAADLSRSETHEPGFDSIMVDMSH-----------FSKEENLRLTRELVAYCNA-RGIATE 148 (306)
T ss_dssp CSSCEEEEEEEECCHHHHHHHHHTC------CCCSEEEECCTT-----------SCHHHHHHHHHHHHHHHHT-TTCEEE
T ss_pred CCCCEEEEcCCCCCHHHHHHHHHhhhhccCCCCCCEEEEeCCC-----------CCHHHHHHHHHHHHHHHHH-cCCeEE
Confidence 467888887654 444433333310 1288888886543 1345677777888877654 355555
Q ss_pred EEecc--C---------------CChHHHHHHHHHHHHcCCcEEEEcccCCCCCCC---CCCcHHHHHHHHhhC--CCcE
Q psy4398 174 CKIRV--F---------------HNEADTIALCKRLEACGIIAIGVHGRTKAERPR---HRNRIEMIRTLTQHL--KIPV 231 (306)
Q Consensus 174 vKir~--g---------------~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~---~p~~~~~v~~i~~~~--~ipv 231 (306)
.-+.. | -++++..++ .+.|+|.|-+.=.+..+.|. ...+++.+++|++.+ ++|+
T Consensus 149 aElG~igG~Edgv~~~~~~~~~yT~Peea~~F----v~TgvD~LAvaiGt~HG~Yk~~~p~Ld~~~L~~I~~~v~~~vpL 224 (306)
T 3pm6_A 149 AEPGRIEGGEDGVQDTVDLEGVLTTPEESEEF----VATGINWLAPAFGNVHGNYGPRGVQLDYERLQRINEAVGERVGL 224 (306)
T ss_dssp ECSSBCCCCBTTBCCCTTCCCBCCCHHHHHHH----HTTTCSEECCCSSCCSSCCCTTCCCCCHHHHHHHHHHHTTTSEE
T ss_pred EEeeeeccccCCccccccccccCCCHHHHHHH----HHcCCCEEEEEcCccccCcCCCCCccCHHHHHHHHHHhCCCCCE
Confidence 54442 1 122333333 36999999764444334442 235889999999998 7999
Q ss_pred EEecCCCC-HHHHHHHHHhhh
Q psy4398 232 IANGGSKE-IVDYGGVFSLNC 251 (306)
Q Consensus 232 ia~GGI~s-~~~~~~~l~~~v 251 (306)
+.-||-.. .++.+++++.|+
T Consensus 225 VlHGgSG~p~e~i~~ai~~GV 245 (306)
T 3pm6_A 225 VLHGADPFTKEIFEKCIERGV 245 (306)
T ss_dssp EECSCTTCCHHHHHHHHHTTE
T ss_pred EeeCCCCCCHHHHHHHHHcCC
Confidence 99999765 455788888765
No 366
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=94.28 E-value=0.38 Score=42.15 Aligned_cols=118 Identities=13% Similarity=0.004 Sum_probs=67.6
Q ss_pred HHHHHHHHHhcccccEEEEeccC-CChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCC-----------------cHH
Q psy4398 157 ACNILTTLISNLSIPVSCKIRVF-HNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRN-----------------RIE 218 (306)
Q Consensus 157 ~~eiv~~v~~~~~~pv~vKir~g-~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~-----------------~~~ 218 (306)
+.+..+..++.-...+..-+..| ++.+++.++++.++++|+|.|.+.-...+....+|. -++
T Consensus 4 ~~~~f~~~~~~~~~~~i~~i~~g~p~~~~~~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~ 83 (262)
T 2ekc_A 4 ISDKFTELKEKREKALVSYLMVGYPDYETSLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLE 83 (262)
T ss_dssp HHHHHHHHHHHTBCEEEEEEETTSSCHHHHHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHHhcCCceEEEEecCCCCChHHHHHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHH
Confidence 34455555443223333333343 677889999999999999999985433322222221 246
Q ss_pred HHHHHHhhC-CCcEEEecCCCCH------HHHHHHHHhhhhhccccCCCCCc--hHH-HHHHHHHhcCCC
Q psy4398 219 MIRTLTQHL-KIPVIANGGSKEI------VDYGGVFSLNCAFLRNHYPVEKL--PKT-ILYAHCKYKRFE 278 (306)
Q Consensus 219 ~v~~i~~~~-~ipvia~GGI~s~------~~~~~~l~~~v~vGrall~~p~~--~~~-~l~~~~~~~g~~ 278 (306)
+++++++.+ ++|++..|-.+.+ ..++.+.+.|+. +++- |.+ .+. .+.+.++++|++
T Consensus 84 ~v~~ir~~~~~~Pi~~m~y~n~v~~~g~~~f~~~~~~aG~d---gvii-~dl~~ee~~~~~~~~~~~gl~ 149 (262)
T 2ekc_A 84 LSETLRKEFPDIPFLLMTYYNPIFRIGLEKFCRLSREKGID---GFIV-PDLPPEEAEELKAVMKKYVLS 149 (262)
T ss_dssp HHHHHHHHCTTSCEEEECCHHHHHHHCHHHHHHHHHHTTCC---EEEC-TTCCHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHhhcCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCC---EEEE-CCCCHHHHHHHHHHHHHcCCc
Confidence 689999998 9999996432211 122333333331 1211 322 222 677778889876
No 367
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=94.25 E-value=0.19 Score=44.78 Aligned_cols=84 Identities=11% Similarity=0.127 Sum_probs=56.3
Q ss_pred HHHHHHHHhccc--ccEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhC--CCcEEE
Q psy4398 158 CNILTTLISNLS--IPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHL--KIPVIA 233 (306)
Q Consensus 158 ~eiv~~v~~~~~--~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~--~ipvia 233 (306)
.+.++.+|+..+ .++.|-+. + .+-++.+.++|+|+|.++.. ..+.++++.+.+ ++|+.+
T Consensus 183 ~~av~~ar~~~~~~~~IgVev~---t----~eea~eA~~aGaD~I~ld~~----------~~~~~k~av~~v~~~ipi~A 245 (286)
T 1x1o_A 183 GEAVRRAKARAPHYLKVEVEVR---S----LEELEEALEAGADLILLDNF----------PLEALREAVRRVGGRVPLEA 245 (286)
T ss_dssp HHHHHHHHHHSCTTSCEEEEES---S----HHHHHHHHHHTCSEEEEESC----------CHHHHHHHHHHHTTSSCEEE
T ss_pred HHHHHHHHHhCCCCCEEEEEeC---C----HHHHHHHHHcCCCEEEECCC----------CHHHHHHHHHHhCCCCeEEE
Confidence 456677777664 34555333 2 33345556789999998764 224445555544 699999
Q ss_pred ecCCCCHHHHHHHHHhhh---hhccccCC
Q psy4398 234 NGGSKEIVDYGGVFSLNC---AFLRNHYP 259 (306)
Q Consensus 234 ~GGI~s~~~~~~~l~~~v---~vGrall~ 259 (306)
+|||+ ++++.++.+.|+ ++|+....
T Consensus 246 sGGIt-~eni~~~a~tGvD~IsVgs~~~~ 273 (286)
T 1x1o_A 246 SGNMT-LERAKAAAEAGVDYVSVGALTHS 273 (286)
T ss_dssp ESSCC-HHHHHHHHHHTCSEEECTHHHHS
T ss_pred EcCCC-HHHHHHHHHcCCCEEEEcHHHcC
Confidence 99996 899999998865 77776654
No 368
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=94.24 E-value=0.53 Score=40.46 Aligned_cols=109 Identities=11% Similarity=0.088 Sum_probs=71.3
Q ss_pred HHHHHHHHHHHhcccccEEEEeccCC-----ChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCC
Q psy4398 155 DIACNILTTLISNLSIPVSCKIRVFH-----NEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKI 229 (306)
Q Consensus 155 ~~~~eiv~~v~~~~~~pv~vKir~g~-----~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~i 229 (306)
..+.++++.+...- .+.|-++.-+ +..+..++|+.+++.|+.+|.+. ..+.++++++.+++
T Consensus 5 ~~~~~~~~~~~~~~--~livscq~~~~~pl~~~~~~~~~A~a~~~~Ga~~i~~~------------~~~~i~~ir~~v~~ 70 (232)
T 3igs_A 5 SLLEQLDKNIAASG--GLIVSCQPVPGSPLDKPEIVAAMALAAEQAGAVAVRIE------------GIDNLRMTRSLVSV 70 (232)
T ss_dssp CHHHHHHHHHHHHC--CEEEECCCCTTCTTCSHHHHHHHHHHHHHTTCSEEEEE------------SHHHHHHHHTTCCS
T ss_pred HHHHHHHHHhhhcC--CEEEEEeCCCCCCCCCcchHHHHHHHHHHCCCeEEEEC------------CHHHHHHHHHhcCC
Confidence 45566666663222 3455555311 35678999999999999999872 35889999999999
Q ss_pred cEEEe-----cC--C---CCHHHHHHHHHhhh---hhccccCCCCCchHHHHHHHHHhcCCC
Q psy4398 230 PVIAN-----GG--S---KEIVDYGGVFSLNC---AFLRNHYPVEKLPKTILYAHCKYKRFE 278 (306)
Q Consensus 230 pvia~-----GG--I---~s~~~~~~~l~~~v---~vGrall~~p~~~~~~l~~~~~~~g~~ 278 (306)
||++. || + .+.++++++++.|+ .++.+...+|...+ ++-++..++|..
T Consensus 71 Pvig~~k~d~~~~~~~I~~~~~~i~~~~~~Gad~V~l~~~~~~~p~~l~-~~i~~~~~~g~~ 131 (232)
T 3igs_A 71 PIIGIIKRDLDESPVRITPFLDDVDALAQAGAAIIAVDGTARQRPVAVE-ALLARIHHHHLL 131 (232)
T ss_dssp CEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEEEEECCSSCCSSCHH-HHHHHHHHTTCE
T ss_pred CEEEEEeecCCCcceEeCccHHHHHHHHHcCCCEEEECccccCCHHHHH-HHHHHHHHCCCE
Confidence 99862 33 2 35678888888765 56666656773332 333334455654
No 369
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=94.22 E-value=0.45 Score=42.30 Aligned_cols=124 Identities=5% Similarity=0.043 Sum_probs=75.9
Q ss_pred hcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEecc--C------CChHHHHHHHHHHHHc
Q psy4398 124 EHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRV--F------HNEADTIALCKRLEAC 195 (306)
Q Consensus 124 ~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~--g------~~~~~~~~~a~~l~~~ 195 (306)
+.|++.|.+-++.. ....+...+-...+..+.+.++++..++. +..|..-++. | .+++...++++.+.+.
T Consensus 90 ~~G~~~V~i~~~~S-~~h~~~~~~~~~~e~~~~~~~~v~~a~~~-G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~ 167 (295)
T 1ydn_A 90 AAHADEIAVFISAS-EGFSKANINCTIAESIERLSPVIGAAIND-GLAIRGYVSCVVECPYDGPVTPQAVASVTEQLFSL 167 (295)
T ss_dssp HTTCSEEEEEEESC-HHHHHHHTSSCHHHHHHHHHHHHHHHHHT-TCEEEEEEECSSEETTTEECCHHHHHHHHHHHHHH
T ss_pred HCCCCEEEEEEecC-HHHHHHHcCCCHHHHHHHHHHHHHHHHHc-CCeEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhc
Confidence 45999988854332 11111112223344556667777777654 6666544442 1 3677899999999999
Q ss_pred CCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCC-CcEEEec--CCC-CHHHHHHHHHhhh
Q psy4398 196 GIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLK-IPVIANG--GSK-EIVDYGGVFSLNC 251 (306)
Q Consensus 196 G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~-ipvia~G--GI~-s~~~~~~~l~~~v 251 (306)
|+|.|.+.+... ...+....++++.+++.++ +|+-..+ +-. ...+...+++.|+
T Consensus 168 G~d~i~l~Dt~G--~~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~an~l~Ai~aG~ 225 (295)
T 1ydn_A 168 GCHEVSLGDTIG--RGTPDTVAAMLDAVLAIAPAHSLAGHYHDTGGRALDNIRVSLEKGL 225 (295)
T ss_dssp TCSEEEEEETTS--CCCHHHHHHHHHHHHTTSCGGGEEEEEBCTTSCHHHHHHHHHHHTC
T ss_pred CCCEEEecCCCC--CcCHHHHHHHHHHHHHhCCCCeEEEEECCCcchHHHHHHHHHHhCC
Confidence 999999875322 1211224678899999986 8887776 322 2444566666665
No 370
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=94.19 E-value=0.96 Score=41.55 Aligned_cols=120 Identities=13% Similarity=0.037 Sum_probs=71.8
Q ss_pred CCHHHHHHHHHHH-hcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEeccCCChHHHHH
Q psy4398 111 ADPERALEAAKKV-EHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIRVFHNEADTIA 187 (306)
Q Consensus 111 ~~~~~~~~aa~~~-~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~ 187 (306)
-|.+.+.+..+.+ +.|+|+|-++.+. +-+..+ ..+.-.++++.+.+.+ .+||.+-+.. .+..++++
T Consensus 77 ID~~al~~lv~~li~~Gv~Gl~v~GTT--------GE~~~L--s~eEr~~vi~~~ve~~~grvpViaGvg~-~st~eai~ 145 (360)
T 4dpp_A 77 FDLEAYDDLVNIQIQNGAEGVIVGGTT--------GEGQLM--SWDEHIMLIGHTVNCFGGSIKVIGNTGS-NSTREAIH 145 (360)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSTT--------TTGGGS--CHHHHHHHHHHHHHHHTTTSEEEEECCC-SSHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEecccc--------cChhhC--CHHHHHHHHHHHHHHhCCCCeEEEecCC-CCHHHHHH
Confidence 4567777777755 4599999996432 111222 2333345555555444 4788887652 56788999
Q ss_pred HHHHHHHcCCcEEEEcccCCCCCCCCCCc---HHHHHHHHhhCCCcEEEe------cCCCCHHHHHHHH
Q psy4398 188 LCKRLEACGIIAIGVHGRTKAERPRHRNR---IEMIRTLTQHLKIPVIAN------GGSKEIVDYGGVF 247 (306)
Q Consensus 188 ~a~~l~~~G~d~i~v~~~~~~~~~~~p~~---~~~v~~i~~~~~ipvia~------GGI~s~~~~~~~l 247 (306)
+++.++++|+|++.+... .|..|.. .++.++|.++ +||+.= |---+++...++.
T Consensus 146 la~~A~~~Gadavlvv~P----yY~k~sq~gl~~hf~~IA~a--~PiilYNiP~rTg~~ls~e~l~~La 208 (360)
T 4dpp_A 146 ATEQGFAVGMHAALHINP----YYGKTSIEGLIAHFQSVLHM--GPTIIYNVPGRTGQDIPPRAIFKLS 208 (360)
T ss_dssp HHHHHHHTTCSEEEEECC----CSSCCCHHHHHHHHHTTGGG--SCEEEEECHHHHSCCCCHHHHHHHT
T ss_pred HHHHHHHcCCCEEEEcCC----CCCCCCHHHHHHHHHHHHHh--CCEEEEeCCcccCCCCCHHHHHHHh
Confidence 999999999999987643 2222211 3344555554 465542 3333555555554
No 371
>1dos_A Aldolase class II; lyase, classii fructose 1,6-bisphosphate aldolase, glycolysis; 1.67A {Escherichia coli} SCOP: c.1.10.2 PDB: 1b57_A* 1gyn_A 1zen_A
Probab=94.19 E-value=1.4 Score=40.45 Aligned_cols=140 Identities=9% Similarity=0.025 Sum_probs=89.0
Q ss_pred CCCceEEEecCCCH---HHHHHHHHHH--------hcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc
Q psy4398 100 EKNKIILQIGTADP---ERALEAAKKV--------EHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL 168 (306)
Q Consensus 100 ~~~p~ivql~g~~~---~~~~~aa~~~--------~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~ 168 (306)
.+.|+++.+-|... +.+..+.+.. +.||.-|.+..|. -.++++.+...++++...+ .
T Consensus 100 ~~VPVaLHlDHg~~~~~~~i~~~i~a~~~~~~~~~~~gFtSVMiDgS~-----------~p~eENI~~Tkevv~~ah~-~ 167 (358)
T 1dos_A 100 YGVPVILHTDHCAKKLLPWIDGLLDAGEKHFAATGKPLFSSHMIDLSE-----------ESLQENIEICSKYLERMSK-I 167 (358)
T ss_dssp HTCEEEEEECCCCGGGHHHHHHHHHHHHHHHHHHSSCSCSEEEECCTT-----------SCHHHHHHHHHHHHHHHHH-T
T ss_pred CCCCEEEECCCCCCccHHHHHHHHHHHHHHHHhcccCCCceEeecCCC-----------CCHHHHHHHHHHHHHHHHH-c
Confidence 46899999987643 2233222221 1379999997553 2355677888888887654 4
Q ss_pred cccEEEEecc--C----CC---------hHHHHHHHHHHHH-cCCc---EEEEcccCCCCCCC---CCCcHHHHHHHHhh
Q psy4398 169 SIPVSCKIRV--F----HN---------EADTIALCKRLEA-CGII---AIGVHGRTKAERPR---HRNRIEMIRTLTQH 226 (306)
Q Consensus 169 ~~pv~vKir~--g----~~---------~~~~~~~a~~l~~-~G~d---~i~v~~~~~~~~~~---~p~~~~~v~~i~~~ 226 (306)
++.|-.-+.. | .+ ..+..+..+..++ .|+| .|-+.=.+..+.|. ...+++.++++++.
T Consensus 168 gvsVEaELG~vGG~EDgv~~~~~~~~~~yT~Peea~~fv~~ttgvd~~d~LAvaiGt~HG~Yk~g~p~L~~~~L~~i~~~ 247 (358)
T 1dos_A 168 GMTLEIELGCTGGEEDGVDNSHMDASALYTQPEDVDYAYTELSKISPRFTIAASFGNVHGVYKAGNVVLTPTILRDSQEY 247 (358)
T ss_dssp TCEEEEECCCCCCCCCCCSCCCCCCCCCSCCHHHHHHHHHHHHTTCSCEEEECCSSCCCSSCCCSCCCCCTHHHHHHHHH
T ss_pred CCEEEEEeccccCcCCCccccccccccccCCHHHHHHHHHHhcCCChhceEEEecccccCccCCCCCCcCHHHHHHHHHH
Confidence 6666666554 1 00 1234455555556 5888 88764444444442 23467888888775
Q ss_pred ---------CCCcEEEecCCCC-HHHHHHHHHhhh
Q psy4398 227 ---------LKIPVIANGGSKE-IVDYGGVFSLNC 251 (306)
Q Consensus 227 ---------~~ipvia~GGI~s-~~~~~~~l~~~v 251 (306)
+++|++..||-.+ .++++++++.|+
T Consensus 248 i~~~~g~~~~~vpLVlHGgSG~~~e~i~~ai~~GV 282 (358)
T 1dos_A 248 VSKKHNLPHNSLNFVFHGGSGSTAQEIKDSVSYGV 282 (358)
T ss_dssp HHHHHTCCTTCSCEEECSCTTCCHHHHHHHHHTTE
T ss_pred HHHHhCCCCCCCcEEEeCCCCCCHHHHHHHHHCCC
Confidence 6799999998764 567888888865
No 372
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=94.06 E-value=0.31 Score=43.30 Aligned_cols=102 Identities=9% Similarity=0.108 Sum_probs=61.7
Q ss_pred CHHHHHHHHH-HHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEeccCCChHHHHHHHH
Q psy4398 112 DPERALEAAK-KVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFHNEADTIALCK 190 (306)
Q Consensus 112 ~~~~~~~aa~-~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~a~ 190 (306)
+++...+.|+ .+++|+|.|+|+..+..+... . -+..+..+.+..+++++++.+++||++-.. -.+.++
T Consensus 36 ~~~~a~~~a~~~v~~GAdiIDIGgestrPga~--~--v~~~eE~~rv~pvi~~l~~~~~~piSIDT~-------~~~va~ 104 (282)
T 1aj0_A 36 SLIDAVKHANLMINAGATIIDVGGESTRPGAA--E--VSVEEELQRVIPVVEAIAQRFEVWISVDTS-------KPEVIR 104 (282)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEEESSCCSTTCC--C--CCHHHHHHHHHHHHHHHHHHCCCEEEEECC-------CHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCcCCCCCC--c--CCHHHHHHHHHHHHHHHHhhcCCeEEEeCC-------CHHHHH
Confidence 3555555555 445699999999854221000 0 112344566788888888877889888766 246666
Q ss_pred HHHHcCCcEEE-EcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEe
Q psy4398 191 RLEACGIIAIG-VHGRTKAERPRHRNRIEMIRTLTQHLKIPVIAN 234 (306)
Q Consensus 191 ~l~~~G~d~i~-v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~ 234 (306)
+..++|++.|. +++. ..+ +++. +.+..++|+|..
T Consensus 105 aAl~aGa~iINdvsg~------~d~---~~~~-~~a~~~~~vVlm 139 (282)
T 1aj0_A 105 ESAKVGAHIINDIRSL------SEP---GALE-AAAETGLPVCLM 139 (282)
T ss_dssp HHHHTTCCEEEETTTT------CST---THHH-HHHHHTCCEEEE
T ss_pred HHHHcCCCEEEECCCC------CCH---HHHH-HHHHhCCeEEEE
Confidence 77778999886 3332 112 2333 334457887774
No 373
>3v5c_A Mandelate racemase/muconate lactonizing protein; enolase fold, galacturonate dehydratase, double Mg site, LYA; 1.53A {Paenibacillus SP} PDB: 3v5f_A* 3p3b_A* 3ops_A* 3n4f_A* 3qpe_A*
Probab=94.03 E-value=0.29 Score=45.48 Aligned_cols=151 Identities=8% Similarity=-0.075 Sum_probs=93.7
Q ss_pred HHHHHHHHHH-HhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEeccCCChHHHHHHH
Q psy4398 113 PERALEAAKK-VEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIRVFHNEADTIALC 189 (306)
Q Consensus 113 ~~~~~~aa~~-~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~~a 189 (306)
++++.+.++. .++||..+-+.+|.+.. +-.. ..+++.-.+.++++|+.+ +..+.+-...+|+.+++.+++
T Consensus 149 ~e~~~~~a~~~~~~Gf~~~KlKvg~~~~------~~~~-~~~~~~d~~~v~avR~a~g~~~~l~vDaN~~w~~~~A~~~~ 221 (392)
T 3v5c_A 149 VALMQEEAMQGYAKGQRHFKIKVGRGGR------HMPL-WEGTKRDIAIVRGISEVAGPAGKIMIDANNAYNLNLTKEVL 221 (392)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEECCTTTT------TSCH-HHHHHHHHHHHHHHHHHHCTTCCEEEECTTCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCEEEECCCCCCc------cccc-cccHHHHHHHHHHHHHHcCCCCcEEeeCCCCcCHHHHHHHH
Confidence 3555555554 35699999998875321 0000 012455567788888876 466777777789999999999
Q ss_pred HHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhh-----CCCcEEEecCCCCHHHHHHHHHhhh-hhcc-ccCCCCC
Q psy4398 190 KRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQH-----LKIPVIANGGSKEIVDYGGVFSLNC-AFLR-NHYPVEK 262 (306)
Q Consensus 190 ~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~-----~~ipvia~GGI~s~~~~~~~l~~~v-~vGr-all~~p~ 262 (306)
+.|++.++.+|- ++.. .+++..+++++. +++||.+.=.+. ..++.++++.+. .+-. -+..+-.
T Consensus 222 ~~L~~~~l~~iE-------eP~~--~d~~~~~~l~~~~~~~~~~ipIa~gE~~~-~~~~~~li~~~a~dii~~d~~~GGi 291 (392)
T 3v5c_A 222 AALSDVNLYWLE-------AAFH--EDEALYEDLKEWLGQRGQNVLIADGEGLA-SPHLIEWATRGRVDVLQYDIIWPGF 291 (392)
T ss_dssp HHTTTSCCCEEE-------CSSS--CCHHHHHHHHHHHHHHTCCCEEEECCSSC-CTTHHHHHHTTSCCEECCBTTTBCH
T ss_pred HhcccCCCeEEe-------CCCC--cCHHHHHHHHHhhccCCCCCcEECCCccc-HHHHHHHHHcCCCcEEEeCCCCCCH
Confidence 999999887773 2332 367777888875 577876655555 667777776532 1100 0001101
Q ss_pred chHHHHHHHHHhcCCCCC
Q psy4398 263 LPKTILYAHCKYKRFEVP 280 (306)
Q Consensus 263 ~~~~~l~~~~~~~g~~~~ 280 (306)
..-+.+.+..+++|++..
T Consensus 292 tea~kia~~A~~~gv~~~ 309 (392)
T 3v5c_A 292 THWMELGEKLDAHGLRSA 309 (392)
T ss_dssp HHHHHHHHHHHHTTCEEC
T ss_pred HHHHHHHHHHHHcCCeEE
Confidence 122366777888888743
No 374
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=94.02 E-value=0.87 Score=39.91 Aligned_cols=178 Identities=10% Similarity=0.065 Sum_probs=100.9
Q ss_pred ccccccccc-CCceEEccCCCCCCHH----HHHHHHHcCCCEEEecceechhhhhhhhhhhcccccccccCCCCCceeee
Q psy4398 21 NANQANINY-SNKIILAPMVRMNTLP----FRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDGSVVFR 95 (306)
Q Consensus 21 ~~~~~~l~l-~n~i~lAPm~~~t~~~----~r~~~~~~G~g~~~te~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 95 (306)
.++++++.+ .+++++|-++...+.. +...+++.|+..+.--+..+..... ...++ .+.+ .+.+.+
T Consensus 12 ~i~i~~~~iG~~~~vIAgpc~~~~~e~a~~~a~~l~~~Ga~~vk~~~fkprts~~---~~~g~------~~eg-l~~l~~ 81 (262)
T 1zco_A 12 VVKINDVKFGEGFTIIAGPCSIESREQIMKVAEFLAEVGIKVLRGGAFKPRTSPY---SFQGY------GEKA-LRWMRE 81 (262)
T ss_dssp CEEETTEEETSSCEEEEECSBCCCHHHHHHHHHHHHHTTCCEEECBSSCCCSSTT---SCCCC------THHH-HHHHHH
T ss_pred eEEECCEEECCCcEEEEeCCCCCCHHHHHHHHHHHHHcCCCEEEEEecccCCCcc---cccCc------cHHH-HHHHHH
Confidence 344555443 1188888887655544 3333567888766544432211000 00010 0000 112333
Q ss_pred cCCCCCCceEEEecCCCHHHHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEE
Q psy4398 96 TCPREKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCK 175 (306)
Q Consensus 96 ~~~~~~~p~ivql~g~~~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vK 175 (306)
.+.+.|.|++..++... +...+++ . +|.+.| |+...++..++.++. + .++||.+|
T Consensus 82 ~~~~~Gl~~~te~~d~~--~~~~l~~---~-vd~~kI--------------ga~~~~n~~ll~~~a----~-~~kPV~lk 136 (262)
T 1zco_A 82 AADEYGLVTVTEVMDTR--HVELVAK---Y-SDILQI--------------GARNSQNFELLKEVG----K-VENPVLLK 136 (262)
T ss_dssp HHHHHTCEEEEECCCGG--GHHHHHH---H-CSEEEE--------------CGGGTTCHHHHHHHT----T-SSSCEEEE
T ss_pred HHHHcCCcEEEeeCCHH--hHHHHHh---h-CCEEEE--------------CcccccCHHHHHHHH----h-cCCcEEEe
Confidence 34445667776664332 2222222 1 577777 344556666655553 3 69999999
Q ss_pred eccCCChHHHHHHHHHHHHcCCcEEE-EcccCCC-CCC-CCCCcHHHHHHHHhhCCCcEEE
Q psy4398 176 IRVFHNEADTIALCKRLEACGIIAIG-VHGRTKA-ERP-RHRNRIEMIRTLTQHLKIPVIA 233 (306)
Q Consensus 176 ir~g~~~~~~~~~a~~l~~~G~d~i~-v~~~~~~-~~~-~~p~~~~~v~~i~~~~~ipvia 233 (306)
-....+.+++.+.++.+...|...++ ++..... ..| ....++..+..+++.+++|||+
T Consensus 137 ~G~~~t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y~~~~v~L~ai~~lk~~~~~pVi~ 197 (262)
T 1zco_A 137 RGMGNTIQELLYSAEYIMAQGNENVILCERGIRTFETATRFTLDISAVPVVKELSHLPIIV 197 (262)
T ss_dssp CCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEE
T ss_pred cCCCCCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCcChhhcCHHHHHHHHhhhCCCEEE
Confidence 99766889999999999999985555 4532111 133 2345778889999998999865
No 375
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=93.82 E-value=0.047 Score=48.95 Aligned_cols=87 Identities=10% Similarity=0.080 Sum_probs=45.2
Q ss_pred HHHHHHHHHhccc--ccEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhC-------
Q psy4398 157 ACNILTTLISNLS--IPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHL------- 227 (306)
Q Consensus 157 ~~eiv~~v~~~~~--~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~------- 227 (306)
+.+-++++++..+ .++.+-+. +.++ ++.+.++|+|+|-++... .+.++++++.+
T Consensus 185 i~~ai~~~r~~~~~~~~i~vev~---tlee----~~~A~~aGaD~I~ld~~~----------~~~l~~~v~~l~~~~~g~ 247 (294)
T 3c2e_A 185 ITNAVKNARAVCGFAVKIEVECL---SEDE----ATEAIEAGADVIMLDNFK----------GDGLKMCAQSLKNKWNGK 247 (294)
T ss_dssp HHHHHHHHHHHHCTTSCEEEECS---SSHH----HHHHHHHTCSEEECCC------------------------------
T ss_pred HHHHHHHHHHhcCcCCeEEEecC---CHHH----HHHHHHcCCCEEEECCCC----------HHHHHHHHHHhcccccCC
Confidence 4556667776654 34555333 2233 333345899999886421 23444444443
Q ss_pred -CCcEEEecCCCCHHHHHHHHHhhh---hhccccCCCC
Q psy4398 228 -KIPVIANGGSKEIVDYGGVFSLNC---AFLRNHYPVE 261 (306)
Q Consensus 228 -~ipvia~GGI~s~~~~~~~l~~~v---~vGrall~~p 261 (306)
++||.++||| +.+++.++.+.|+ .+|+.++.-|
T Consensus 248 ~~v~I~ASGGI-t~~ni~~~~~~GvD~i~vGs~i~~a~ 284 (294)
T 3c2e_A 248 KHFLLECSGGL-NLDNLEEYLCDDIDIYSTSSIHQGTP 284 (294)
T ss_dssp -CCEEEEECCC-CC------CCCSCSEEECGGGTSSCC
T ss_pred CCeEEEEECCC-CHHHHHHHHHcCCCEEEEechhcCCC
Confidence 2899999999 7999999998865 8888876544
No 376
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=93.74 E-value=0.51 Score=41.76 Aligned_cols=177 Identities=13% Similarity=0.111 Sum_probs=101.7
Q ss_pred cccccccccc--CCceEEccCCCCCCHH----HHHHHHHcCCCEEEecceechhhhhhhhhhhcccccccccCCCC--Cc
Q psy4398 20 ANANQANINY--SNKIILAPMVRMNTLP----FRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLD--GS 91 (306)
Q Consensus 20 ~~~~~~~l~l--~n~i~lAPm~~~t~~~----~r~~~~~~G~g~~~te~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~ 91 (306)
..++++++.+ .+++++|-.+...+.. +...+++.|+.++-.-...+..... +|...+. .+
T Consensus 25 ~~i~i~~~~iG~~~~~vIAgpc~~~~~e~a~~~a~~~k~~ga~~~k~~~~kprts~~------------~f~g~g~~gl~ 92 (276)
T 1vs1_A 25 TVVEVEGVRIGGGSKAVIAGPCSVESWEQVREAALAVKEAGAHMLRGGAFKPRTSPY------------SFQGLGLEGLK 92 (276)
T ss_dssp CCEEETTEEEBTTBCEEEEECSBCCCHHHHHHHHHHHHHHTCSEEECBSSCCCSSTT------------SCCCCTHHHHH
T ss_pred cEEEECCEEECCCCeEEEEecCCCCCHHHHHHHHHHHHHhCCCEEEeEEEeCCCChh------------hhcCCCHHHHH
Confidence 4456666554 2477888777555544 2233457888875444332211000 0111000 11
Q ss_pred eeeecCCCCCCceEEEecCCCHHHHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhccccc
Q psy4398 92 VVFRTCPREKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIP 171 (306)
Q Consensus 92 ~~~~~~~~~~~p~ivql~g~~~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~p 171 (306)
.+.+.+.+.|.|++..++-.. +...+++ . +|.+.| |+..+++..++.++. ..++|
T Consensus 93 ~l~~~~~~~Gl~~~te~~d~~--~~~~l~~---~-vd~~kI--------------gs~~~~n~~ll~~~a-----~~~kP 147 (276)
T 1vs1_A 93 LLRRAGDEAGLPVVTEVLDPR--HVETVSR---Y-ADMLQI--------------GARNMQNFPLLREVG-----RSGKP 147 (276)
T ss_dssp HHHHHHHHHTCCEEEECCCGG--GHHHHHH---H-CSEEEE--------------CGGGTTCHHHHHHHH-----HHTCC
T ss_pred HHHHHHHHcCCcEEEecCCHH--HHHHHHH---h-CCeEEE--------------CcccccCHHHHHHHH-----ccCCe
Confidence 222333344556665554322 2221222 1 456555 566667777766654 35899
Q ss_pred EEEEeccCCChHHHHHHHHHHHHcCC-cEEEEc-ccCCCCC-CCCCCcHHHHHHHHhhCCCcEEE
Q psy4398 172 VSCKIRVFHNEADTIALCKRLEACGI-IAIGVH-GRTKAER-PRHRNRIEMIRTLTQHLKIPVIA 233 (306)
Q Consensus 172 v~vKir~g~~~~~~~~~a~~l~~~G~-d~i~v~-~~~~~~~-~~~p~~~~~v~~i~~~~~ipvia 233 (306)
|.+|-....+.+++...++.+...|. +.+.+| |...-.. .....++..+..+++.+++||++
T Consensus 148 V~lk~G~~~t~~ei~~Ave~i~~~Gn~~i~L~~Rg~~~yp~y~~~~vdl~~i~~lk~~~~lpVi~ 212 (276)
T 1vs1_A 148 VLLKRGFGNTVEELLAAAEYILLEGNWQVVLVERGIRTFEPSTRFTLDVAAVAVLKEATHLPVIV 212 (276)
T ss_dssp EEEECCTTCCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSSSSBCBHHHHHHHHHHBSSCEEE
T ss_pred EEEcCCCCCCHHHHHHHHHHHHHcCCCeEEEEeCCcCCCCCcCcchhCHHHHHHHHHHhCCCEEE
Confidence 99999976688899999999999998 455566 5422223 23346888899999988999865
No 377
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=93.73 E-value=0.38 Score=43.03 Aligned_cols=77 Identities=14% Similarity=0.170 Sum_probs=45.1
Q ss_pred HHHHHHHH-HHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEeccCCChHHHHHHHHHH
Q psy4398 114 ERALEAAK-KVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFHNEADTIALCKRL 192 (306)
Q Consensus 114 ~~~~~aa~-~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~a~~l 192 (306)
+...+.|+ .+++|+|.|+|+.-+..+.. -.-+..+..+.+..+++++++.+++||++-.. + .+.+++.
T Consensus 63 ~~a~~~a~~~v~~GAdiIDIGgeStrPga----~~v~~~eE~~RvvpvI~~l~~~~~vpiSIDT~---~----~~V~~aA 131 (297)
T 1tx2_A 63 DAAVRHAKEMRDEGAHIIDIGGESTRPGF----AKVSVEEEIKRVVPMIQAVSKEVKLPISIDTY---K----AEVAKQA 131 (297)
T ss_dssp HHHHHHHHHHHHTTCSEEEEESCC----C----CCCCHHHHHHHHHHHHHHHHHHSCSCEEEECS---C----HHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECCCcCCCCC----CCCCHHHHHHHHHHHHHHHHhcCCceEEEeCC---C----HHHHHHH
Confidence 44444444 33469999999976522110 00111233445666778888877899988765 2 3455555
Q ss_pred HHcCCcEEE
Q psy4398 193 EACGIIAIG 201 (306)
Q Consensus 193 ~~~G~d~i~ 201 (306)
.++|++.|.
T Consensus 132 l~aGa~iIN 140 (297)
T 1tx2_A 132 IEAGAHIIN 140 (297)
T ss_dssp HHHTCCEEE
T ss_pred HHcCCCEEE
Confidence 556888775
No 378
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=93.69 E-value=1.7 Score=37.73 Aligned_cols=118 Identities=15% Similarity=0.090 Sum_probs=72.7
Q ss_pred HHHHHHHHHhc-CCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEecc-------CCChHHHH
Q psy4398 115 RALEAAKKVEH-DVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRV-------FHNEADTI 186 (306)
Q Consensus 115 ~~~~aa~~~~~-g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~-------g~~~~~~~ 186 (306)
.|.+..+.+++ |||.|||+-|+ +.-..+.-.++|+.+++. +.-+..-+.. -.++...+
T Consensus 86 ~~~~yl~~~k~lGf~~iEiS~G~-------------i~l~~~~~~~~I~~~~~~-G~~v~~EvG~k~~~~~~~~~~~~~I 151 (251)
T 1qwg_A 86 KFDEFLNECEKLGFEAVEISDGS-------------SDISLEERNNAIKRAKDN-GFMVLTEVGKKMPDKDKQLTIDDRI 151 (251)
T ss_dssp CHHHHHHHHHHHTCCEEEECCSS-------------SCCCHHHHHHHHHHHHHT-TCEEEEEECCSSHHHHTTCCHHHHH
T ss_pred cHHHHHHHHHHcCCCEEEECCCc-------------ccCCHHHHHHHHHHHHHC-CCEEeeeccccCCcccCCCCHHHHH
Confidence 45666677766 99999998554 223455566777777664 2222222221 12456789
Q ss_pred HHHHHHHHcCCcEEEEcccCCC---CCC--CCCCcHHHHHHHHhhCCCc-EEEecCCCCHHHHHHHHH
Q psy4398 187 ALCKRLEACGIIAIGVHGRTKA---ERP--RHRNRIEMIRTLTQHLKIP-VIANGGSKEIVDYGGVFS 248 (306)
Q Consensus 187 ~~a~~l~~~G~d~i~v~~~~~~---~~~--~~p~~~~~v~~i~~~~~ip-via~GGI~s~~~~~~~l~ 248 (306)
+.++...++||+.|.+-+|... +-+ .+....+.+.++.+.++.- +|.--= +.+.-...++
T Consensus 152 ~~~~~~LeAGA~~ViiEarEsG~~iGi~~~~g~~r~d~v~~i~~~l~~eklifEAp--~k~qq~~fI~ 217 (251)
T 1qwg_A 152 KLINFDLDAGADYVIIEGRESGKGKGLFDKEGKVKENELDVLAKNVDINKVIFEAP--QKSQQVAFIL 217 (251)
T ss_dssp HHHHHHHHHTCSEEEECCTTTCCSSTTBCTTSCBCHHHHHHHHTTSCGGGEEEECC--SHHHHHHHHH
T ss_pred HHHHHHHHCCCcEEEEeeecccCCcccCCCCCCCcHHHHHHHHHhCChhhEEEECC--ChHHHHHHHH
Confidence 9999999999999999988643 222 2345668888888877432 444332 2444444443
No 379
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=93.67 E-value=0.19 Score=46.34 Aligned_cols=64 Identities=14% Similarity=0.096 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhC-CCcEEEecCCCCHHHHHHHHHhhh
Q psy4398 183 ADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHL-KIPVIANGGSKEIVDYGGVFSLNC 251 (306)
Q Consensus 183 ~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~-~ipvia~GGI~s~~~~~~~l~~~v 251 (306)
++..+.++.+.++|+|.|+++.... +. ...++.++.+++.+ ++|||+ |+|.|+++++.+.+.|+
T Consensus 99 ~~~~e~~~~a~~aGvdvI~id~a~G---~~-~~~~e~I~~ir~~~~~~~Vi~-G~V~T~e~A~~a~~aGa 163 (361)
T 3r2g_A 99 ENELQRAEALRDAGADFFCVDVAHA---HA-KYVGKTLKSLRQLLGSRCIMA-GNVATYAGADYLASCGA 163 (361)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSCC---SS-HHHHHHHHHHHHHHTTCEEEE-EEECSHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCC---Cc-HhHHHHHHHHHHhcCCCeEEE-cCcCCHHHHHHHHHcCC
Confidence 5678899999999999999864321 11 12468899999987 788887 66889999999998865
No 380
>4aaj_A N-(5'-phosphoribosyl)anthranilate isomerase; alpha/beta-barrel, hyperthermophilic, phosphoribo isomerase; 1.75A {Pyrococcus furiosus}
Probab=93.55 E-value=0.84 Score=39.18 Aligned_cols=116 Identities=16% Similarity=0.210 Sum_probs=70.2
Q ss_pred eEEEecCCCHHHHHHHHHHHhc-CCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEeccCC--
Q psy4398 104 IILQIGTADPERALEAAKKVEH-DVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFH-- 180 (306)
Q Consensus 104 ~ivql~g~~~~~~~~aa~~~~~-g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~-- 180 (306)
..+.++ .++++.. ..++. +.|.|+||-. +.++. ++.+++..++|++=-+++..
T Consensus 73 ~~v~v~-v~~~ei~---~~i~~~~ld~vQLHG~----------------E~~~~----~~~l~~~~~~~viKa~~v~~~~ 128 (228)
T 4aaj_A 73 FLVSTM-VGFSEWA---MAIERTGAQYIQVHSN----------------ALPQT----IDTLKKEFGVFVMKAFRVPTIS 128 (228)
T ss_dssp EEEECC-CCHHHHH---HHHHHHTCSEEEECSC----------------CCHHH----HHHHHHHHCCEEEEEEECCSSC
T ss_pred EEEecc-CchHHHH---HHHHhccchheecccc----------------cCHHH----HHHHhhccCceEEEEEEecccc
Confidence 444443 3455443 34444 8899999721 23444 45556666778765555421
Q ss_pred -C-hHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHh
Q psy4398 181 -N-EADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSL 249 (306)
Q Consensus 181 -~-~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~ 249 (306)
. .++...+...+....+|++.+... ++.....+|++++.+... .|+|.+||++ +++..++++.
T Consensus 129 ~~~~~~~~~~~~~~~~~~~d~~LlDs~---GGtG~~fDW~~~~~~~~~--~p~iLAGGL~-peNV~~Ai~~ 193 (228)
T 4aaj_A 129 KNPEEDANRLLSEISRYNADMVLLDTG---AGSGKLHDLRVSSLVARK--IPVIVAGGLN-AENVEEVIKV 193 (228)
T ss_dssp SCHHHHHHHHHHHHHHSCCSEEEEEC----------CCCHHHHHHHHH--SCEEEESSCC-TTTHHHHHHH
T ss_pred cchhhhHHHHHHHHhccCCCEEccCCC---CCCcCcCChHHHHHhhhc--CCeEEECCCC-HHHHHHHHHH
Confidence 1 234555666677788999988752 122224688888877654 6999999986 6777777763
No 381
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=93.53 E-value=1.3 Score=36.88 Aligned_cols=121 Identities=18% Similarity=0.107 Sum_probs=72.4
Q ss_pred ceEEEecCCCHHHHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhc-ccccEEE--EeccC
Q psy4398 103 KIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISN-LSIPVSC--KIRVF 179 (306)
Q Consensus 103 p~ivql~g~~~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~-~~~pv~v--Kir~g 179 (306)
++++.+--.+.++..+.++.+..|+|.||+.+ |+. ...-.++++.+|+. .+.|+.+ |+.
T Consensus 2 ~li~a~D~~~~~~~~~~~~~~~~~~diie~G~--p~~--------------~~~g~~~i~~ir~~~~~~~i~~~~~~~-- 63 (211)
T 3f4w_A 2 KLQLALDELTLPEAMVFMDKVVDDVDIIEVGT--PFL--------------IREGVNAIKAIKEKYPHKEVLADAKIM-- 63 (211)
T ss_dssp EEEEEECSCCHHHHHHHHHHHGGGCSEEEECH--HHH--------------HHHTTHHHHHHHHHCTTSEEEEEEEEC--
T ss_pred cEEEEeCCCCHHHHHHHHHHhhcCccEEEeCc--HHH--------------HhccHHHHHHHHHhCCCCEEEEEEEec--
Confidence 35566656677887777776656899999864 441 01113578888876 4778754 444
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcH-HHHHHHHhhCCCcEEE-ecCCCCH-HHHHHHHHhhh
Q psy4398 180 HNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRI-EMIRTLTQHLKIPVIA-NGGSKEI-VDYGGVFSLNC 251 (306)
Q Consensus 180 ~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~-~~v~~i~~~~~ipvia-~GGI~s~-~~~~~~l~~~v 251 (306)
.. ...+++.+.++|+|++++|.... ..++ ++++.+++ .+++++. .=+..++ +.++.+.+.++
T Consensus 64 ~~---~~~~~~~~~~~Gad~v~v~~~~~------~~~~~~~~~~~~~-~g~~~~v~~~~~~t~~~~~~~~~~~g~ 128 (211)
T 3f4w_A 64 DG---GHFESQLLFDAGADYVTVLGVTD------VLTIQSCIRAAKE-AGKQVVVDMICVDDLPARVRLLEEAGA 128 (211)
T ss_dssp SC---HHHHHHHHHHTTCSEEEEETTSC------HHHHHHHHHHHHH-HTCEEEEECTTCSSHHHHHHHHHHHTC
T ss_pred cc---hHHHHHHHHhcCCCEEEEeCCCC------hhHHHHHHHHHHH-cCCeEEEEecCCCCHHHHHHHHHHcCC
Confidence 22 12458888999999999986521 1122 33344443 3666654 2334454 44666666544
No 382
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=93.52 E-value=1.3 Score=40.41 Aligned_cols=118 Identities=14% Similarity=0.127 Sum_probs=81.8
Q ss_pred CCHHHHHHHHHHHhc-CCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEeccCCChHHHHHHH
Q psy4398 111 ADPERALEAAKKVEH-DVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFHNEADTIALC 189 (306)
Q Consensus 111 ~~~~~~~~aa~~~~~-g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~a 189 (306)
.+.+...+.|+.+++ |++.+-...-.|.+.. ..|-+ + . +.-.++++.+++..++|+..-+- +.++. +
T Consensus 117 es~e~a~~~a~~~k~aGa~~vr~q~fKprTs~--~~f~g-l--g-~egl~~l~~~~~e~Gl~~~te~~---d~~~~-~-- 184 (350)
T 1vr6_A 117 EGREMLMETAHFLSELGVKVLRGGAYKPRTSP--YSFQG-L--G-EKGLEYLREAADKYGMYVVTEAL---GEDDL-P-- 184 (350)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEECBSCCCCCST--TSCCC-C--T-HHHHHHHHHHHHHHTCEEEEECS---SGGGH-H--
T ss_pred CCHHHHHHHHHHHHHcCCCeeeeeEEeCCCCh--HhhcC-C--C-HHHHHHHHHHHHHcCCcEEEEeC---CHHHH-H--
Confidence 367788888888875 9999888777665422 12211 1 1 23345556667778999887554 33333 2
Q ss_pred HHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCC-CHHHHHHHHHhh
Q psy4398 190 KRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSK-EIVDYGGVFSLN 250 (306)
Q Consensus 190 ~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~-s~~~~~~~l~~~ 250 (306)
.+++. +|.+-|-+++. .++++++++. .++.||+..-|.. |++++..+++..
T Consensus 185 -~l~~~-vd~lkIgAr~~-------~n~~LL~~va-~~~kPVilk~G~~~tl~ei~~Ave~i 236 (350)
T 1vr6_A 185 -KVAEY-ADIIQIGARNA-------QNFRLLSKAG-SYNKPVLLKRGFMNTIEEFLLSAEYI 236 (350)
T ss_dssp -HHHHH-CSEEEECGGGT-------TCHHHHHHHH-TTCSCEEEECCTTCCHHHHHHHHHHH
T ss_pred -HHHHh-CCEEEECcccc-------cCHHHHHHHH-ccCCcEEEcCCCCCCHHHHHHHHHHH
Confidence 33445 89999987753 3678889888 5699999999997 999999888863
No 383
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=93.51 E-value=0.39 Score=40.30 Aligned_cols=75 Identities=12% Similarity=0.167 Sum_probs=56.6
Q ss_pred cccEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCc-EEEecCCCCHHHHHHHH
Q psy4398 169 SIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIP-VIANGGSKEIVDYGGVF 247 (306)
Q Consensus 169 ~~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ip-via~GGI~s~~~~~~~l 247 (306)
..|+..-++ +.+.++..+.++.+.+.|++.|++...+ +...+.++++++.+++| +++.|++.+.++++.++
T Consensus 6 ~~~i~~~i~-~~d~~~~~~~~~~~~~~G~~~i~l~~~~-------~~~~~~i~~i~~~~~~~l~vg~g~~~~~~~i~~a~ 77 (212)
T 2v82_A 6 KLPLIAILR-GITPDEALAHVGAVIDAGFDAVEIPLNS-------PQWEQSIPAIVDAYGDKALIGAGTVLKPEQVDALA 77 (212)
T ss_dssp SSCEEEECT-TCCHHHHHHHHHHHHHHTCCEEEEETTS-------TTHHHHHHHHHHHHTTTSEEEEECCCSHHHHHHHH
T ss_pred CCCEEEEEe-CCCHHHHHHHHHHHHHCCCCEEEEeCCC-------hhHHHHHHHHHHhCCCCeEEEeccccCHHHHHHHH
Confidence 345555554 3577889999999999999999996543 33467788888877766 45678899999888888
Q ss_pred Hhhh
Q psy4398 248 SLNC 251 (306)
Q Consensus 248 ~~~v 251 (306)
+.++
T Consensus 78 ~~Ga 81 (212)
T 2v82_A 78 RMGC 81 (212)
T ss_dssp HTTC
T ss_pred HcCC
Confidence 8754
No 384
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=93.40 E-value=1.8 Score=38.15 Aligned_cols=125 Identities=13% Similarity=0.113 Sum_probs=84.9
Q ss_pred eEEEecC-CCHHHHHHHHHHHhc-CCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEeccCCC
Q psy4398 104 IILQIGT-ADPERALEAAKKVEH-DVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFHN 181 (306)
Q Consensus 104 ~ivql~g-~~~~~~~~aa~~~~~-g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~ 181 (306)
+|+-.++ .+.+...+.++.+++ |+|.+-...--|.+.. .+|-+ + . +.-.++++.+++..++|+..-+- +
T Consensus 41 vIAgpc~~~~~e~a~~~a~~~k~~ga~~~k~~~~kprts~--~~f~g-~--g-~~gl~~l~~~~~~~Gl~~~te~~---d 111 (276)
T 1vs1_A 41 VIAGPCSVESWEQVREAALAVKEAGAHMLRGGAFKPRTSP--YSFQG-L--G-LEGLKLLRRAGDEAGLPVVTEVL---D 111 (276)
T ss_dssp EEEECSBCCCHHHHHHHHHHHHHHTCSEEECBSSCCCSST--TSCCC-C--T-HHHHHHHHHHHHHHTCCEEEECC---C
T ss_pred EEEecCCCCCHHHHHHHHHHHHHhCCCEEEeEEEeCCCCh--hhhcC-C--C-HHHHHHHHHHHHHcCCcEEEecC---C
Confidence 4445654 367788888888875 9999888777665421 12211 1 1 33345556667778999887655 3
Q ss_pred hHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCC-CHHHHHHHHHhh
Q psy4398 182 EADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSK-EIVDYGGVFSLN 250 (306)
Q Consensus 182 ~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~-s~~~~~~~l~~~ 250 (306)
.+.. +.+++. +|.+-|-+++. .++++++++.+ ++.||+..-|.. +++++..+++..
T Consensus 112 ~~~~----~~l~~~-vd~~kIgs~~~-------~n~~ll~~~a~-~~kPV~lk~G~~~t~~ei~~Ave~i 168 (276)
T 1vs1_A 112 PRHV----ETVSRY-ADMLQIGARNM-------QNFPLLREVGR-SGKPVLLKRGFGNTVEELLAAAEYI 168 (276)
T ss_dssp GGGH----HHHHHH-CSEEEECGGGT-------TCHHHHHHHHH-HTCCEEEECCTTCCHHHHHHHHHHH
T ss_pred HHHH----HHHHHh-CCeEEECcccc-------cCHHHHHHHHc-cCCeEEEcCCCCCCHHHHHHHHHHH
Confidence 3322 334456 89999987753 36778888885 589999999997 999999888753
No 385
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=93.36 E-value=0.33 Score=42.74 Aligned_cols=121 Identities=7% Similarity=-0.072 Sum_probs=73.0
Q ss_pred HHHHHHHHHHhcccccEEEEeccC-CChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCC-----------------CcH
Q psy4398 156 IACNILTTLISNLSIPVSCKIRVF-HNEADTIALCKRLEACGIIAIGVHGRTKAERPRHR-----------------NRI 217 (306)
Q Consensus 156 ~~~eiv~~v~~~~~~pv~vKir~g-~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p-----------------~~~ 217 (306)
.+.+..+..++.=...+..-+..| ++.+.+.++++.++++|+|.|.+.-...+....+| .-+
T Consensus 4 ri~~~f~~~~~~~~~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~ 83 (267)
T 3vnd_A 4 RYQAKFAALKAQDKGAFVPFVTIGDPSPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCF 83 (267)
T ss_dssp HHHHHHHHHHHHTCCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHH
T ss_pred HHHHHHHHHHhcCCCeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHH
Confidence 355666666654445566666665 67899999999999999999998643333222222 126
Q ss_pred HHHHHHHhh-CCCcEEEecCCCCH-----HH-HHHHHHhhhhhccccCCC-CCchHHHHHHHHHhcCCC
Q psy4398 218 EMIRTLTQH-LKIPVIANGGSKEI-----VD-YGGVFSLNCAFLRNHYPV-EKLPKTILYAHCKYKRFE 278 (306)
Q Consensus 218 ~~v~~i~~~-~~ipvia~GGI~s~-----~~-~~~~l~~~v~vGrall~~-p~~~~~~l~~~~~~~g~~ 278 (306)
+.++++++. +++|++.-+=.+.+ +. ++++.+.|+ ---++.| |.-...++.+.++++|++
T Consensus 84 ~~v~~ir~~~~~~Pivlm~Y~npv~~~g~e~f~~~~~~aGv--dgvii~Dlp~ee~~~~~~~~~~~gl~ 150 (267)
T 3vnd_A 84 DIITKVRAQHPDMPIGLLLYANLVFANGIDEFYTKAQAAGV--DSVLIADVPVEESAPFSKAAKAHGIA 150 (267)
T ss_dssp HHHHHHHHHCTTCCEEEEECHHHHHHHCHHHHHHHHHHHTC--CEEEETTSCGGGCHHHHHHHHHTTCE
T ss_pred HHHHHHHhcCCCCCEEEEecCcHHHHhhHHHHHHHHHHcCC--CEEEeCCCCHhhHHHHHHHHHHcCCe
Confidence 788999988 79999987532211 11 233333332 0011222 221223777888888877
No 386
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=93.30 E-value=0.23 Score=45.88 Aligned_cols=91 Identities=9% Similarity=0.106 Sum_probs=62.5
Q ss_pred ChHHHHHHHHHHHhcccccEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhC-CCcE
Q psy4398 153 TPDIACNILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHL-KIPV 231 (306)
Q Consensus 153 ~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~-~ipv 231 (306)
+++...+.++.+++.-..++.+-+. .+ .+..+.++.+.++|+|.|+++... + . .+..++.++++++.+ ++||
T Consensus 80 s~e~~~~~i~~vk~~~~l~vga~vg--~~-~~~~~~~~~lieaGvd~I~idta~--G-~-~~~~~~~I~~ik~~~p~v~V 152 (366)
T 4fo4_A 80 SIEQQAAQVHQVKISGGLRVGAAVG--AA-PGNEERVKALVEAGVDVLLIDSSH--G-H-SEGVLQRIRETRAAYPHLEI 152 (366)
T ss_dssp CHHHHHHHHHHHHTTTSCCCEEECC--SC-TTCHHHHHHHHHTTCSEEEEECSC--T-T-SHHHHHHHHHHHHHCTTCEE
T ss_pred CHHHHHHHHHHHHhcCceeEEEEec--cC-hhHHHHHHHHHhCCCCEEEEeCCC--C-C-CHHHHHHHHHHHHhcCCCce
Confidence 4677778888888753333333332 32 235677888999999999985321 1 1 112357788999998 7888
Q ss_pred EEecCCCCHHHHHHHHHhhh
Q psy4398 232 IANGGSKEIVDYGGVFSLNC 251 (306)
Q Consensus 232 ia~GGI~s~~~~~~~l~~~v 251 (306)
|+ |.+.+.++++++.+.|+
T Consensus 153 i~-G~v~t~e~A~~a~~aGA 171 (366)
T 4fo4_A 153 IG-GNVATAEGARALIEAGV 171 (366)
T ss_dssp EE-EEECSHHHHHHHHHHTC
T ss_pred Ee-eeeCCHHHHHHHHHcCC
Confidence 76 66789999999998865
No 387
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=93.29 E-value=1.6 Score=38.89 Aligned_cols=110 Identities=17% Similarity=0.141 Sum_probs=71.8
Q ss_pred CCCCCceEEEecCCCHHHHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEec
Q psy4398 98 PREKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIR 177 (306)
Q Consensus 98 ~~~~~p~ivql~g~~~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir 177 (306)
.+.|.|++-.++-... . +.+.+.+|.+.| |+..+.+.+++.+ +. .+++||.+|-.
T Consensus 86 ~~~Glp~~te~~d~~~--~----~~l~~~vd~~kI--------------gA~~~~n~~Ll~~----~a-~~~kPV~lk~G 140 (292)
T 1o60_A 86 DTFGVKIITDVHEIYQ--C----QPVADVVDIIQL--------------PAFLARQTDLVEA----MA-KTGAVINVKKP 140 (292)
T ss_dssp HHHCCEEEEECCSGGG--H----HHHHTTCSEEEE--------------CGGGTTCHHHHHH----HH-HTTCEEEEECC
T ss_pred HHcCCcEEEecCCHHH--H----HHHHhcCCEEEE--------------CcccccCHHHHHH----HH-cCCCcEEEeCC
Confidence 3456666665543221 1 112225677766 5556667665444 43 46899999999
Q ss_pred cCCChHHHHHHHHHHHHcCCcEEE-EcccCCCCCCCC-CCcHHHHHHHHhhC-CCcEEE
Q psy4398 178 VFHNEADTIALCKRLEACGIIAIG-VHGRTKAERPRH-RNRIEMIRTLTQHL-KIPVIA 233 (306)
Q Consensus 178 ~g~~~~~~~~~a~~l~~~G~d~i~-v~~~~~~~~~~~-p~~~~~v~~i~~~~-~ipvia 233 (306)
...+.+++...++.+...|..-++ ++..+.. .|.. ..++..+..+++.+ ++||+.
T Consensus 141 ~~~t~~ei~~Av~~i~~~Gn~~i~L~~rg~~~-~y~~~~~dl~~i~~lk~~~~~~pV~~ 198 (292)
T 1o60_A 141 QFLSPSQMGNIVEKIEECGNDKIILCDRGTNF-GYDNLIVDMLGFSVMKKASKGSPVIF 198 (292)
T ss_dssp TTSCGGGHHHHHHHHHHTTCCCEEEEECCEEC-STTCEECCTTHHHHHHHHTTSCCEEE
T ss_pred CCCCHHHHHHHHHHHHHcCCCeEEEEECCCCC-CCCccccCHHHHHHHHhhCCCCCEEE
Confidence 766788899999999999985555 4443321 2321 15788889999998 899988
No 388
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=93.26 E-value=0.41 Score=42.44 Aligned_cols=121 Identities=14% Similarity=0.098 Sum_probs=78.0
Q ss_pred CCHHHHHHHHHHH-hcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEeccCCChHHHHHHH
Q psy4398 111 ADPERALEAAKKV-EHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFHNEADTIALC 189 (306)
Q Consensus 111 ~~~~~~~~aa~~~-~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~a 189 (306)
-|.+.+.+..+.+ +. +|+|=++.+. |-...-..+.-.++++.+.+ .+||.+-+.. .+..++++++
T Consensus 16 iD~~~l~~lv~~li~~-v~gl~v~Gtt----------GE~~~Ls~~Er~~v~~~~~~--rvpviaGvg~-~~t~~ai~la 81 (283)
T 2pcq_A 16 LDEEAFRELAQALEPL-VDGLLVYGSN----------GEGVHLTPEERARGLRALRP--RKPFLVGLME-ETLPQAEGAL 81 (283)
T ss_dssp BCHHHHHHHHHHHGGG-SSCCEETCTT----------TTGGGSCHHHHHHHHHTCCC--SSCCEEEECC-SSHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhh-CCEEEECCcC----------cCchhcCHHHHHHHHHHHHh--CCcEEEeCCC-CCHHHHHHHH
Confidence 3566777777754 56 8998885332 22222344444667777666 7899988873 4678899999
Q ss_pred HHHHHcCCcEEEEcccCCCCCC-CCCCcHHHHHHHHhhCCCcEEE-e----cCC-CCHHHHHHHHH
Q psy4398 190 KRLEACGIIAIGVHGRTKAERP-RHRNRIEMIRTLTQHLKIPVIA-N----GGS-KEIVDYGGVFS 248 (306)
Q Consensus 190 ~~l~~~G~d~i~v~~~~~~~~~-~~p~~~~~v~~i~~~~~ipvia-~----GGI-~s~~~~~~~l~ 248 (306)
+.+++.|+|++.+....-. +. ....-.++.++|.+ ++||+. | .|+ -+++.+.++.+
T Consensus 82 ~~A~~~Gadavlv~~P~y~-~~~~~~~l~~~f~~va~--~lPiilYn~P~~tg~~l~~~~~~~La~ 144 (283)
T 2pcq_A 82 LEAKAAGAMALLATPPRYY-HGSLGAGLLRYYEALAE--KMPLFLYHVPQNTKVDLPLEAVEALAP 144 (283)
T ss_dssp HHHHHHTCSEEEECCCCTT-GGGTTTHHHHHHHHHHH--HSCEEEEECHHHHCCCCCHHHHHHHTT
T ss_pred HHHHhcCCCEEEecCCcCC-CCCCHHHHHHHHHHHhc--CCCEEEEeCccccCcCCCHHHHHHHhc
Confidence 9999999999988643211 11 11113566778887 788765 3 243 46777766643
No 389
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=93.24 E-value=0.49 Score=41.54 Aligned_cols=96 Identities=17% Similarity=0.144 Sum_probs=57.3
Q ss_pred CHHHHHHHHH-HHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEeccCCChHHHHHHHH
Q psy4398 112 DPERALEAAK-KVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFHNEADTIALCK 190 (306)
Q Consensus 112 ~~~~~~~aa~-~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~a~ 190 (306)
+.+...+-|+ .+++|+|.|+|+.+.+. ....+.+.+++..+++.+++|+++-.. + .+.++
T Consensus 23 ~~~~a~~~a~~~v~~GAdiIDIg~g~~~------------v~~~ee~~rvv~~i~~~~~~pisIDT~---~----~~v~~ 83 (262)
T 1f6y_A 23 DPAPVQEWARRQEEGGARALDLNVGPAV------------QDKVSAMEWLVEVTQEVSNLTLCLDST---N----IKAIE 83 (262)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEBCC----------------CHHHHHHHHHHHHHTTCCSEEEEECS---C----HHHHH
T ss_pred CHHHHHHHHHHHHHCCCcEEEECCCCCC------------CChHHHHHHHHHHHHHhCCCeEEEeCC---C----HHHHH
Confidence 4455555555 44569999999875422 235677888888888777888888655 2 23444
Q ss_pred HHHHc--CCcEEE-EcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEe
Q psy4398 191 RLEAC--GIIAIG-VHGRTKAERPRHRNRIEMIRTLTQHLKIPVIAN 234 (306)
Q Consensus 191 ~l~~~--G~d~i~-v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~ 234 (306)
+..++ |++.|. +++. ...++-+..+.+..++|+|..
T Consensus 84 aAl~a~~Ga~iINdvs~~--------~d~~~~~~~~~a~~~~~vvlm 122 (262)
T 1f6y_A 84 AGLKKCKNRAMINSTNAE--------REKVEKLFPLAVEHGAALIGL 122 (262)
T ss_dssp HHHHHCSSCEEEEEECSC--------HHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHhhCCCCCEEEECCCC--------cccHHHHHHHHHHhCCcEEEE
Confidence 44444 887776 5542 112323444555567777763
No 390
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=93.12 E-value=0.98 Score=40.32 Aligned_cols=176 Identities=16% Similarity=0.101 Sum_probs=100.7
Q ss_pred cccccccccCC--c-eEEccCCCCCCHH-HHH-------HHHHcCCCEEEecceechhhhhhhhhhhcccccccccCCCC
Q psy4398 21 NANQANINYSN--K-IILAPMVRMNTLP-FRL-------LALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLD 89 (306)
Q Consensus 21 ~~~~~~l~l~n--~-i~lAPm~~~t~~~-~r~-------~~~~~G~g~~~te~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 89 (306)
.++++++.+-+ | +++|--|-+-+.. ... +..+.+.+.++...+.-.++... . .|..+|.
T Consensus 28 ~v~~~~i~~G~~~~l~vIaGPCsies~e~~~~~A~~lk~~~~~~~~~~v~k~~f~KapRTs~--~--------sf~Glg~ 97 (298)
T 3fs2_A 28 TVKVGNVTFSNSAPLALIAGPCQMETRDHAFEMAGRLKEMTDKLGIGLVYKSSFDKANRTSL--K--------AARGIGL 97 (298)
T ss_dssp SEEETTEEECTTSCCEEEEECSBCCCHHHHHHHHHHHHHHHHHHTCCEEEECBCCCCC-------------------CCH
T ss_pred eEEECCEEECCCCceEEEEeCCcCCCHHHHHHHHHHHHHHHHHcCCcEEEEcccccCCCCCC--C--------CcCCcCH
Confidence 45677777753 4 5666666444433 211 22345778888875542121110 0 0110110
Q ss_pred ---CceeeecCCCCCCceEEEecCCCHHHHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHh
Q psy4398 90 ---GSVVFRTCPREKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLIS 166 (306)
Q Consensus 90 ---~~~~~~~~~~~~~p~ivql~g~~~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~ 166 (306)
.+.+.+.+.+.|.|++-.++ ++++.. .+.+.+|.+.| |+..+++.+++.+ +.
T Consensus 98 ~~GL~~L~~~~~e~GLpv~Tev~--D~~~v~----~l~~~vd~lkI--------------gA~~~~n~~LLr~----va- 152 (298)
T 3fs2_A 98 EKALEVFSDLKKEYGFPVLTDIH--TEEQCA----AVAPVVDVLQI--------------PAFLCRQTDLLIA----AA- 152 (298)
T ss_dssp HHHHHHHHHHHHHHCCCEEEECC--SHHHHH----HHTTTCSEEEE--------------CGGGTTCHHHHHH----HH-
T ss_pred HHHHHHHHHHHHhcCCeEEEEeC--CHHHHH----HHHhhCCEEEE--------------CccccCCHHHHHH----HH-
Confidence 11223333445667776653 332222 23334777776 4555667775544 33
Q ss_pred cccccEEEEeccCCChHHHHHHHHHHHHcCCcEEEE-cccCCCCCCCC-CCcHHHHHHHHhhCCCcEEE
Q psy4398 167 NLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGV-HGRTKAERPRH-RNRIEMIRTLTQHLKIPVIA 233 (306)
Q Consensus 167 ~~~~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v-~~~~~~~~~~~-p~~~~~v~~i~~~~~ipvia 233 (306)
..++||.+|-....+.+++...++.+.+.|.+-|.+ +..+.- .|.. ..|+..+..+++ +++||+.
T Consensus 153 ~~gkPVilK~Gms~t~~ei~~ave~i~~~Gn~~iiL~erg~~y-~~~~~~vdl~~i~~lk~-~~~PV~~ 219 (298)
T 3fs2_A 153 RTGRVVNVKKGQFLAPWDMKNVLAKITESGNPNVLATERGVSF-GYNTLVSDMRALPIMAG-LGAPVIF 219 (298)
T ss_dssp HTTSEEEEECCTTCCGGGHHHHHHHHHTTTCCCEEEEECCEEC-SSSCEECCTTHHHHHHT-TTSCEEE
T ss_pred ccCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCC-CCCCCccCHHHHHHHHH-cCCcEEE
Confidence 468999999997667888999999999999876665 544322 2322 147888889998 8999988
No 391
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=93.10 E-value=1.4 Score=39.14 Aligned_cols=121 Identities=11% Similarity=0.128 Sum_probs=77.1
Q ss_pred CCHHHHHHHHH---HHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEeccCCChHHHH
Q psy4398 111 ADPERALEAAK---KVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFHNEADTI 186 (306)
Q Consensus 111 ~~~~~~~~aa~---~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~ 186 (306)
.+.+++..... .+. .|+|+|-+.+-.|.. .-|.+...++++..+ +.++++=-.. ....+..
T Consensus 105 Ys~~E~~~M~~dI~~~~~~GAdGvVfG~L~~dg-----------~iD~~~~~~Li~~a~---~l~vTFHRAF-D~~~d~~ 169 (287)
T 3iwp_A 105 YSDREIEVMKADIRLAKLYGADGLVFGALTEDG-----------HIDKELCMSLMAICR---PLPVTFHRAF-DMVHDPM 169 (287)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCSEEEECCBCTTS-----------CBCHHHHHHHHHHHT---TSCEEECGGG-GGCSCHH
T ss_pred cCHHHHHHHHHHHHHHHHcCCCEEEEeeeCCCC-----------CcCHHHHHHHHHHcC---CCcEEEECch-hccCCHH
Confidence 56666655443 333 499999987654542 126777788887654 2455443221 1112355
Q ss_pred HHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhC--CCcEEEecCCCCHHHHHHHHH-hhh
Q psy4398 187 ALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHL--KIPVIANGGSKEIVDYGGVFS-LNC 251 (306)
Q Consensus 187 ~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~--~ipvia~GGI~s~~~~~~~l~-~~v 251 (306)
+..+.+.+.|++.|-.+|.. ...+..++.++++.+.. +++|++.|||+ .+++.++++ .|+
T Consensus 170 ~Ale~Li~lGvdrILTSG~~----~~a~~Gl~~Lk~Lv~~a~~rI~ImaGGGV~-~~Ni~~l~~~tG~ 232 (287)
T 3iwp_A 170 AALETLLTLGFERVLTSGCD----SSALEGLPLIKRLIEQAKGRIVVMPGGGIT-DRNLQRILEGSGA 232 (287)
T ss_dssp HHHHHHHHHTCSEEEECTTS----SSTTTTHHHHHHHHHHHTTSSEEEECTTCC-TTTHHHHHHHHCC
T ss_pred HHHHHHHHcCCCEEECCCCC----CChHHhHHHHHHHHHHhCCCCEEEECCCcC-HHHHHHHHHhhCC
Confidence 66677778899999887642 11245778888887765 59999999987 567777776 444
No 392
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=92.91 E-value=0.32 Score=40.56 Aligned_cols=82 Identities=22% Similarity=0.154 Sum_probs=55.6
Q ss_pred ceEEEecCCCHHHHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc-cccEEE--EeccC
Q psy4398 103 KIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL-SIPVSC--KIRVF 179 (306)
Q Consensus 103 p~ivql~g~~~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~v--Kir~g 179 (306)
++++.+-..+.++..+.++.+..|+|.||+.++. . . .+| .++++++++.. +.|+++ |+.
T Consensus 2 ~li~a~d~~~~~~~~~~~~~~~~~v~~iev~~~~--~--~--~~g----------~~~i~~l~~~~~~~~i~~~l~~~-- 63 (207)
T 3ajx_A 2 KLQVAIDLLSTEAALELAGKVAEYVDIIELGTPL--I--K--AEG----------LSVITAVKKAHPDKIVFADMKTM-- 63 (207)
T ss_dssp EEEEEECCSCHHHHHHHHHHHGGGCSEEEECHHH--H--H--HHC----------THHHHHHHHHSTTSEEEEEEEEC--
T ss_pred eEEEEeCCCCHHHHHHHHHHhhccCCEEEECcHH--H--H--hhC----------HHHHHHHHHhCCCCeEEEEEEec--
Confidence 4566666678888888888776788999995432 0 0 011 33677777766 678776 644
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEccc
Q psy4398 180 HNEADTIALCKRLEACGIIAIGVHGR 205 (306)
Q Consensus 180 ~~~~~~~~~a~~l~~~G~d~i~v~~~ 205 (306)
+. ...+++.+.++|+|++++|..
T Consensus 64 -di--~~~~~~~a~~~Gad~v~vh~~ 86 (207)
T 3ajx_A 64 -DA--GELEADIAFKAGADLVTVLGS 86 (207)
T ss_dssp -SC--HHHHHHHHHHTTCSEEEEETT
T ss_pred -Cc--cHHHHHHHHhCCCCEEEEecc
Confidence 31 223567888899999999964
No 393
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=92.88 E-value=1.4 Score=38.87 Aligned_cols=114 Identities=18% Similarity=0.156 Sum_probs=72.5
Q ss_pred EEEecCCCHHHHHHHHHHHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc-cccEEEEeccC--C
Q psy4398 105 ILQIGTADPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL-SIPVSCKIRVF--H 180 (306)
Q Consensus 105 ivql~g~~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~g--~ 180 (306)
++-+...|. -.|+.++ .|+|.| +- |....+ ..-||-....-..+....-+++|+..+ ..||.+-+..| .
T Consensus 31 i~m~tayDa----~sA~l~e~aG~d~i-lv-GdSl~~-~~lG~~dt~~vtldem~~h~~aV~r~~~~~~vvaD~pfgsY~ 103 (275)
T 3vav_A 31 IAMLTCYDA----SFAALLDRANVDVQ-LI-GDSLGN-VLQGQTTTLPVTLDDIAYHTACVARAQPRALIVADLPFGTYG 103 (275)
T ss_dssp EEEEECCSH----HHHHHHHHTTCSEE-EE-CTTHHH-HTTCCSSSTTCCHHHHHHHHHHHHHTCCSSEEEEECCTTSCS
T ss_pred EEEEeCcCH----HHHHHHHHcCCCEE-EE-CcHHHH-HHcCCCCCCccCHHHHHHHHHHHHhcCCCCCEEEecCCCCCC
Confidence 344555553 3445565 499999 52 211111 112222222234556666677887777 47899999874 3
Q ss_pred ChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEe
Q psy4398 181 NEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIAN 234 (306)
Q Consensus 181 ~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~ 234 (306)
+.++..+.+.++.+.|+++|.+-+.. ...+.++.+.++ +||+++.
T Consensus 104 s~~~a~~~a~rl~kaGa~aVklEdg~--------~~~~~i~~l~~~-GIpv~gH 148 (275)
T 3vav_A 104 TPADAFASAVKLMRAGAQMVKFEGGE--------WLAETVRFLVER-AVPVCAH 148 (275)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEECCG--------GGHHHHHHHHHT-TCCEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCch--------hHHHHHHHHHHC-CCCEEEe
Confidence 66778888888888999999997642 234677777764 8999975
No 394
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=92.87 E-value=0.25 Score=43.72 Aligned_cols=89 Identities=9% Similarity=0.084 Sum_probs=63.7
Q ss_pred HHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhh---hhccccCCC
Q psy4398 184 DTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNC---AFLRNHYPV 260 (306)
Q Consensus 184 ~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v---~vGrall~~ 260 (306)
+..++|+.+++.|+++|++..-. ..+.+ .++.++++++.+++||+.-+.|.|..+++++.+.|+ .++.+.+.+
T Consensus 73 ~p~~~A~~y~~~GA~~isvltd~--~~f~G--s~~~l~~ir~~v~lPvl~kdfiid~~qv~~A~~~GAD~VlLi~a~l~~ 148 (272)
T 3qja_A 73 DPAKLAQAYQDGGARIVSVVTEQ--RRFQG--SLDDLDAVRASVSIPVLRKDFVVQPYQIHEARAHGADMLLLIVAALEQ 148 (272)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCG--GGHHH--HHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCSEEEEEGGGSCH
T ss_pred CHHHHHHHHHHcCCCEEEEecCh--hhcCC--CHHHHHHHHHhCCCCEEECccccCHHHHHHHHHcCCCEEEEecccCCH
Confidence 57899999999999999975321 11111 467899999999999999999999988888888754 566555532
Q ss_pred CCchHHHHHHHHHhcCCC
Q psy4398 261 EKLPKTILYAHCKYKRFE 278 (306)
Q Consensus 261 p~~~~~~l~~~~~~~g~~ 278 (306)
.. -.++.+...+.|+.
T Consensus 149 ~~--l~~l~~~a~~lGl~ 164 (272)
T 3qja_A 149 SV--LVSMLDRTESLGMT 164 (272)
T ss_dssp HH--HHHHHHHHHHTTCE
T ss_pred HH--HHHHHHHHHHCCCc
Confidence 11 12455556666765
No 395
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=92.58 E-value=0.6 Score=39.34 Aligned_cols=115 Identities=14% Similarity=0.098 Sum_probs=66.8
Q ss_pred CCCHHHHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEeccCCChHHHHHHH
Q psy4398 110 TADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFHNEADTIALC 189 (306)
Q Consensus 110 g~~~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~a 189 (306)
..++++..+.++. .+.|.|+||-. ..++.+.++ +. +.|++--++.... .+. .
T Consensus 61 n~~~~~i~~~~~~--~~ld~vQLHG~----------------e~~~~~~~l----~~--~~~vika~~v~~~-~~l-~-- 112 (203)
T 1v5x_A 61 DQPPEEVLRLMEE--ARLQVAQLHGE----------------EPPEWAEAV----GR--FYPVIKAFPLEGP-ARP-E-- 112 (203)
T ss_dssp SCCHHHHHHHHHH--TTCSEEEECSC----------------CCHHHHHHH----TT--TSCEEEEEECSSS-CCG-G--
T ss_pred CCCHHHHHHHHHh--hCCCEEEECCC----------------CCHHHHHHh----cc--CCCEEEEEEcCCh-Hhh-h--
Confidence 4455555544432 27899999821 245544443 22 5788866775322 112 1
Q ss_pred HHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHH---hhhhhccccC
Q psy4398 190 KRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFS---LNCAFLRNHY 258 (306)
Q Consensus 190 ~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~---~~v~vGrall 258 (306)
+.+..+|++.+.... ++.....+|+++..+. ..+.|++..||++ +++..+++. +++-+.+.+=
T Consensus 113 --~~~~~~d~~LlD~~~--gGtG~~fdW~~l~~~~-~~~~p~~LAGGL~-peNV~~ai~~~p~gVDvsSGvE 178 (203)
T 1v5x_A 113 --WADYPAQALLLDGKR--PGSGEAYPRAWAKPLL-ATGRRVILAGGIA-PENLEEVLALRPYALDLASGVE 178 (203)
T ss_dssp --GGGSSCSEEEEECSS--TTSCCCCCGGGGHHHH-HTTSCEEECSSCC-STTHHHHHHHCCSEEEESGGGE
T ss_pred --hhhcCCCEEEEcCCC--CCCCCccCHHHHHhhh-ccCCcEEEECCCC-HHHHHHHHhcCCCEEEeCCcee
Confidence 233448999987643 2333356888877632 2467999999986 666766553 2565666554
No 396
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=92.55 E-value=1 Score=41.23 Aligned_cols=81 Identities=16% Similarity=0.055 Sum_probs=56.1
Q ss_pred ccEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcccCCC-------------------------------------CCCC
Q psy4398 170 IPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKA-------------------------------------ERPR 212 (306)
Q Consensus 170 ~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~-------------------------------------~~~~ 212 (306)
-|.+..+-...+.+.+.++.++++++|+.+|.++--+.- ....
T Consensus 122 ~~~wfQlY~~~d~~~~~~l~~ra~~aG~~alvlTvD~p~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~d 201 (352)
T 3sgz_A 122 GFRWFQLYMKSDWDFNKQMVQRAEALGFKALVITIDTPVLGNRRRDKRNQLNLEANILKAALRALKEEKPTQSVPVLFPK 201 (352)
T ss_dssp CEEEEECCCCSCHHHHHHHHHHHHHTTCCCEEEECSCSSCCCCHHHHHHHHHSCHHHHTTCC---------------CCC
T ss_pred ccceeccccCCCHHHHHHHHHHHHHcCCCEEEEEeCCCCCCcchhhhhcCCCCCcccchhhhcccccccccchhhhhccC
Confidence 466666664445555777777777788777776421100 0111
Q ss_pred CCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhh
Q psy4398 213 HRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNC 251 (306)
Q Consensus 213 ~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v 251 (306)
+...|+.++.+++.+++||+.-| +.+.++++.+.+.|+
T Consensus 202 ~~~~w~~i~~lr~~~~~PvivK~-v~~~e~A~~a~~~Ga 239 (352)
T 3sgz_A 202 ASFCWNDLSLLQSITRLPIILKG-ILTKEDAELAMKHNV 239 (352)
T ss_dssp TTCCHHHHHHHHHHCCSCEEEEE-ECSHHHHHHHHHTTC
T ss_pred CCCCHHHHHHHHHhcCCCEEEEe-cCcHHHHHHHHHcCC
Confidence 34579999999999999998765 688999999998865
No 397
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=92.41 E-value=0.57 Score=41.05 Aligned_cols=119 Identities=8% Similarity=-0.022 Sum_probs=66.5
Q ss_pred HHHHHHHHHhcccccEEEEecc-CCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCC-----------------cHH
Q psy4398 157 ACNILTTLISNLSIPVSCKIRV-FHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRN-----------------RIE 218 (306)
Q Consensus 157 ~~eiv~~v~~~~~~pv~vKir~-g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~-----------------~~~ 218 (306)
+.+..+..++.-...+..-+-. .++.+++.++++.++++|+|.|.+.-...+....+|. -++
T Consensus 4 ~~~~f~~~~~~~~~~~i~~i~~gdp~~~~~~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~ 83 (268)
T 1qop_A 4 YENLFAQLNDRREGAFVPFVTLGDPGIEQSLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFE 83 (268)
T ss_dssp HHHHHHHHHHTTCCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHHhcCCceEEEEeeCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHH
Confidence 4455555544322233333333 3667889999999999999999995433332222221 136
Q ss_pred HHHHHHhh-CCCcEEEecCCCC------HHHHHHHHHhhhhhccccC-CCCCchH-HHHHHHHHhcCCC
Q psy4398 219 MIRTLTQH-LKIPVIANGGSKE------IVDYGGVFSLNCAFLRNHY-PVEKLPK-TILYAHCKYKRFE 278 (306)
Q Consensus 219 ~v~~i~~~-~~ipvia~GGI~s------~~~~~~~l~~~v~vGrall-~~p~~~~-~~l~~~~~~~g~~ 278 (306)
.++++++. +++||+..+-.+. .+.++.+.+.|+. +++ .|-...+ ..+.+.++++|++
T Consensus 84 ~v~~ir~~~~~~Pv~lm~y~n~v~~~g~~~~~~~~~~aGad---gii~~d~~~e~~~~~~~~~~~~g~~ 149 (268)
T 1qop_A 84 MLAIIREKHPTIPIGLLMYANLVFNNGIDAFYARCEQVGVD---SVLVADVPVEESAPFRQAALRHNIA 149 (268)
T ss_dssp HHHHHHHHCSSSCEEEEECHHHHHTTCHHHHHHHHHHHTCC---EEEETTCCGGGCHHHHHHHHHTTCE
T ss_pred HHHHHHhcCCCCCEEEEEcccHHHHhhHHHHHHHHHHcCCC---EEEEcCCCHHHHHHHHHHHHHcCCc
Confidence 78999999 7999987542110 2333444444431 111 1111122 2666778888865
No 398
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=92.27 E-value=0.48 Score=41.81 Aligned_cols=121 Identities=10% Similarity=-0.052 Sum_probs=74.2
Q ss_pred HHHHHHHHHHhcccccEEEEeccC-CChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCC-----------------CcH
Q psy4398 156 IACNILTTLISNLSIPVSCKIRVF-HNEADTIALCKRLEACGIIAIGVHGRTKAERPRHR-----------------NRI 217 (306)
Q Consensus 156 ~~~eiv~~v~~~~~~pv~vKir~g-~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p-----------------~~~ 217 (306)
.+.+..+..++.=...+..-+..| |+.+.+.++++.++++|+|.|.+.-...+....+| .-+
T Consensus 6 ri~~~f~~~~~~~~~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~ 85 (271)
T 3nav_A 6 RYQALFQRLSAAQQGAFVPFVTIGDPNPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICF 85 (271)
T ss_dssp HHHHHHHHHHHTTBCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHH
T ss_pred HHHHHHHHHHhcCCCeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHH
Confidence 355666776665455666677765 68899999999999999999998543332222222 125
Q ss_pred HHHHHHHhh-CCCcEEEecCCCC-----HH-HHHHHHHhhhhhccccCCC-CCchHHHHHHHHHhcCCC
Q psy4398 218 EMIRTLTQH-LKIPVIANGGSKE-----IV-DYGGVFSLNCAFLRNHYPV-EKLPKTILYAHCKYKRFE 278 (306)
Q Consensus 218 ~~v~~i~~~-~~ipvia~GGI~s-----~~-~~~~~l~~~v~vGrall~~-p~~~~~~l~~~~~~~g~~ 278 (306)
+.++++++. .++|++.-|=.+. .+ -++++.+.|+ ---++-| |.-...++.+.++++|++
T Consensus 86 ~~v~~~r~~~~~~Pivlm~Y~n~v~~~g~~~f~~~~~~aGv--dGvIipDlp~ee~~~~~~~~~~~gl~ 152 (271)
T 3nav_A 86 ELIAQIRARNPETPIGLLMYANLVYARGIDDFYQRCQKAGV--DSVLIADVPTNESQPFVAAAEKFGIQ 152 (271)
T ss_dssp HHHHHHHHHCTTSCEEEEECHHHHHHTCHHHHHHHHHHHTC--CEEEETTSCGGGCHHHHHHHHHTTCE
T ss_pred HHHHHHHhcCCCCCEEEEecCcHHHHHhHHHHHHHHHHCCC--CEEEECCCCHHHHHHHHHHHHHcCCe
Confidence 788999988 7999998763211 12 1233333333 0011222 221223778888899977
No 399
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=92.23 E-value=0.68 Score=41.72 Aligned_cols=87 Identities=13% Similarity=0.141 Sum_probs=63.2
Q ss_pred ChHHHHHHHHHHHhcccccEEEEeccCCC--hHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCc
Q psy4398 153 TPDIACNILTTLISNLSIPVSCKIRVFHN--EADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIP 230 (306)
Q Consensus 153 ~~~~~~eiv~~v~~~~~~pv~vKir~g~~--~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ip 230 (306)
.++.+.+.++.+++.++.|+.|-+-..+. ..+..+.++.+.+.|+|.|++|... | .++++.+++. ++|
T Consensus 51 s~~~l~~~i~~i~~~~~~p~~v~l~v~~~~~~~~~~~~~~~~~~~g~d~V~~~~g~-------p--~~~~~~l~~~-gi~ 120 (328)
T 2gjl_A 51 SPEALAAEIARCRELTDRPFGVNLTLLPTQKPVPYAEYRAAIIEAGIRVVETAGND-------P--GEHIAEFRRH-GVK 120 (328)
T ss_dssp SHHHHHHHHHHHHHHCSSCCEEEEEECCCSSCCCHHHHHHHHHHTTCCEEEEEESC-------C--HHHHHHHHHT-TCE
T ss_pred CHHHHHHHHHHHHHhcCCCeEEEEeccccccCccHHHHHHHHHhcCCCEEEEcCCC-------c--HHHHHHHHHc-CCC
Confidence 47778888899988777777766553210 2345677888889999999998532 2 4677888776 888
Q ss_pred EEEecCCCCHHHHHHHHHhhh
Q psy4398 231 VIANGGSKEIVDYGGVFSLNC 251 (306)
Q Consensus 231 via~GGI~s~~~~~~~l~~~v 251 (306)
++. .+.+.+++..+.+.++
T Consensus 121 vi~--~v~t~~~a~~~~~~Ga 139 (328)
T 2gjl_A 121 VIH--KCTAVRHALKAERLGV 139 (328)
T ss_dssp EEE--EESSHHHHHHHHHTTC
T ss_pred EEe--eCCCHHHHHHHHHcCC
Confidence 885 3778998888877654
No 400
>1vqt_A Orotidine 5'-phosphate decarboxylase; TM0332, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.00A {Thermotoga maritima} SCOP: c.1.2.3
Probab=92.18 E-value=0.93 Score=38.39 Aligned_cols=124 Identities=16% Similarity=0.115 Sum_probs=72.0
Q ss_pred CCCceEEEecCCC-HHHHHHHHHHHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhccccc--EEEE
Q psy4398 100 EKNKIILQIGTAD-PERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIP--VSCK 175 (306)
Q Consensus 100 ~~~p~ivql~g~~-~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~p--v~vK 175 (306)
.+.++++-+--.| ++....+++.+. .|+|.|.+|... + .+ .++.+.+... | +.|-
T Consensus 57 ~~~~v~lD~K~~DI~nT~~~~v~~~~~~GaD~vTvh~~~-----------G-----~~----~l~~~~~~~~-~~~~~V~ 115 (213)
T 1vqt_A 57 RNLKIILDLKFCDIPSTVERSIKSWDHPAIIGFTVHSCA-----------G-----YE----SVERALSATD-KHVFVVV 115 (213)
T ss_dssp TTCEEEEEEEECSCHHHHHHHHHHHCCTTEEEEEEEGGG-----------C-----HH----HHHHHHHHCS-SEEEEEC
T ss_pred CCCCEEEEeecccCchHHHHHHHHHHHCCCCEEEEeccC-----------C-----HH----HHHHHHHhcC-CCeEEEE
Confidence 4567888874333 444455555554 499999998432 1 11 2333333222 3 2222
Q ss_pred e--ccCCCh-HHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHH---H------H
Q psy4398 176 I--RVFHNE-ADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIV---D------Y 243 (306)
Q Consensus 176 i--r~g~~~-~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~---~------~ 243 (306)
+ +.+... +....+++. .+.|+| +++++ +.++++++.++.| +..+||+--. | .
T Consensus 116 ~lts~~~~l~~~v~~~a~~-~e~G~d-vV~~~-------------~~~~~ir~~~~~~-~v~pGI~~~~~~~dq~rv~t~ 179 (213)
T 1vqt_A 116 KLTSMEGSLEDYMDRIEKL-NKLGCD-FVLPG-------------PWAKALREKIKGK-ILVPGIRMEVKADDQKDVVTL 179 (213)
T ss_dssp CCTTSCCCHHHHHHHHHHH-HHHTCE-EECCH-------------HHHHHHTTTCCSC-EEECCBC---------CCBCH
T ss_pred EeCCCCHHHHHHHHHHHHH-hcCCCE-EEEcH-------------HHHHHHHHHCCCC-EEECCCCCCCCccchhhcCCH
Confidence 1 211112 556778888 999999 55421 4667888888777 7888886321 1 4
Q ss_pred HHHHHhh---hhhccccCCCC
Q psy4398 244 GGVFSLN---CAFLRNHYPVE 261 (306)
Q Consensus 244 ~~~l~~~---v~vGrall~~p 261 (306)
++ +++| +.+||+++..+
T Consensus 180 ~~-i~aGad~iVvGR~I~~a~ 199 (213)
T 1vqt_A 180 EE-MKGIANFAVLGREIYLSE 199 (213)
T ss_dssp HH-HTTTCSEEEESHHHHTSS
T ss_pred HH-HHCCCCEEEEChhhcCCC
Confidence 56 6664 49999998643
No 401
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=92.02 E-value=0.51 Score=40.20 Aligned_cols=126 Identities=12% Similarity=0.163 Sum_probs=74.4
Q ss_pred CCceEEEecCCCHHHHHHHHHHHhc-CCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEeccC
Q psy4398 101 KNKIILQIGTADPERALEAAKKVEH-DVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVF 179 (306)
Q Consensus 101 ~~p~ivql~g~~~~~~~~aa~~~~~-g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g 179 (306)
...++.+|...+..++.+..+.+.+ |+|.+++-.- | |... .+..+-.++++++++.++.|+.|-+=.
T Consensus 6 ~~~i~psi~a~d~~~l~~~i~~~~~~Gad~i~l~i~--------D--g~fv-~~~~~~~~~~~~lr~~~~~~~~v~lmv- 73 (228)
T 1h1y_A 6 AAKIAPSMLSSDFANLAAEADRMVRLGADWLHMDIM--------D--GHFV-PNLTIGAPVIQSLRKHTKAYLDCHLMV- 73 (228)
T ss_dssp CCEEEEBGGGSCGGGHHHHHHHHHHTTCSEEEEEEE--------B--SSSS-SCBCBCHHHHHHHHTTCCSEEEEEEES-
T ss_pred CCeEEEEeeeCCHHHHHHHHHHHHHcCCCEEEEEEe--------c--CCcC-cchhhCHHHHHHHHhhcCCcEEEEEEe-
Confidence 3457778888888888888887765 9999888531 1 1100 111112367777887776676654443
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCc-HHHHHHHHhhCCCcEEEecCC-CCHHHHHHHHH
Q psy4398 180 HNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNR-IEMIRTLTQHLKIPVIANGGS-KEIVDYGGVFS 248 (306)
Q Consensus 180 ~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~-~~~v~~i~~~~~ipvia~GGI-~s~~~~~~~l~ 248 (306)
.+. .++++.+.++|+|++++|+.... .. .+.++++++. ++.++..=.- ++.+..+....
T Consensus 74 ~d~---~~~i~~~~~agad~v~vH~~~~~------~~~~~~~~~i~~~-g~~igv~~~p~t~~e~~~~~~~ 134 (228)
T 1h1y_A 74 TNP---SDYVEPLAKAGASGFTFHIEVSR------DNWQELIQSIKAK-GMRPGVSLRPGTPVEEVFPLVE 134 (228)
T ss_dssp SCG---GGGHHHHHHHTCSEEEEEGGGCT------TTHHHHHHHHHHT-TCEEEEEECTTSCGGGGHHHHH
T ss_pred cCH---HHHHHHHHHcCCCEEEECCCCcc------cHHHHHHHHHHHc-CCCEEEEEeCCCCHHHHHHHHh
Confidence 233 33466667799999999976422 23 4567777665 4444333222 33444555544
No 402
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=92.02 E-value=0.78 Score=40.70 Aligned_cols=112 Identities=15% Similarity=0.145 Sum_probs=73.8
Q ss_pred cCCCCCCceEEEecCCCHHHHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEE
Q psy4398 96 TCPREKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCK 175 (306)
Q Consensus 96 ~~~~~~~p~ivql~g~~~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vK 175 (306)
.+.+.|.|++-.++-.. +.. .+.+.+|.+.| |+..+++.+++.+ +. .+++||.+|
T Consensus 86 ~~~e~Glp~~Tev~d~~--~v~----~l~~~vd~lqI--------------gA~~~~n~~LLr~----va-~~gkPVilK 140 (285)
T 3sz8_A 86 VKARFGVPVITDVHEAE--QAA----PVAEIADVLQV--------------PAFLARQTDLVVA----IA-KAGKPVNVK 140 (285)
T ss_dssp HHHHHCCCEEEECCSGG--GHH----HHHTTCSEEEE--------------CGGGTTCHHHHHH----HH-HTSSCEEEE
T ss_pred HHHhcCCeEEEEeCCHH--HHH----HHHHhCCEEEE--------------CccccCCHHHHHH----HH-ccCCcEEEe
Confidence 33445667776654322 221 22223677766 4555667775544 33 368999999
Q ss_pred eccCCChHHHHHHHHHHHHcCCcEEEE-cccCCCCCCCC-CCcHHHHHHHHhhC-CCcEEE
Q psy4398 176 IRVFHNEADTIALCKRLEACGIIAIGV-HGRTKAERPRH-RNRIEMIRTLTQHL-KIPVIA 233 (306)
Q Consensus 176 ir~g~~~~~~~~~a~~l~~~G~d~i~v-~~~~~~~~~~~-p~~~~~v~~i~~~~-~ipvia 233 (306)
-....+.+++...++.+.+.|.+-|.+ |..+.- .|.. ..|+..+..+++.+ ++||+.
T Consensus 141 ~G~~~t~~ei~~ave~i~~~Gn~~i~L~erg~~y-~~~~~~vdl~~i~~lk~~~~~~pV~~ 200 (285)
T 3sz8_A 141 KPQFMSPTQLKHVVSKCGEVGNDRVMLCERGSSF-GYDNLVVDMLGFRQMAETTGGCPVIF 200 (285)
T ss_dssp CCTTSCGGGTHHHHHHHHHTTCCCEEEEECCEEC-SSSCEECCTTHHHHHHHHTTSCCEEE
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCcEEEEeCCCCC-CCCcCccCHHHHHHHHHhCCCCCEEE
Confidence 997667888899999999999876665 544422 2322 25788999999999 599988
No 403
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=92.02 E-value=1.2 Score=38.06 Aligned_cols=135 Identities=12% Similarity=0.038 Sum_probs=77.7
Q ss_pred CC-ceEEEecCCCH-HHHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhc-ccccEEEEec
Q psy4398 101 KN-KIILQIGTADP-ERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISN-LSIPVSCKIR 177 (306)
Q Consensus 101 ~~-p~ivql~g~~~-~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~-~~~pv~vKir 177 (306)
+. +++.-+--.|. +....+++.+.+. |.+.+|.... . .+.+...++...+. .++-+...++
T Consensus 52 ~~~~VflDlK~~DI~nTv~~~~~~~~~~-d~vTVh~~~G-----------~----~~~~~~a~~~~~~~~~~v~vLts~s 115 (222)
T 4dbe_A 52 DVEEIIVDFKLADIGYIMKSIVERLSFA-NSFIAHSFIG-----------V----KGSLDELKRYLDANSKNLYLVAVMS 115 (222)
T ss_dssp CCSEEEEEEEECSCHHHHHHHHTTCTTC-SEEEEESTTC-----------T----TTTHHHHHHHHHHTTCEEEEEEECS
T ss_pred CCCeEEEEeeecchHHHHHHHHHHHHhC-CEEEEEcCcC-----------c----HHHHHHHHHHHHhcCCcEEEEEeCC
Confidence 45 67777754443 3444444444334 9999984431 0 11233334433321 1222333444
Q ss_pred c-CCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCH-HHHHHHHHhh---hh
Q psy4398 178 V-FHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEI-VDYGGVFSLN---CA 252 (306)
Q Consensus 178 ~-g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~-~~~~~~l~~~---v~ 252 (306)
. ++......++++.++++|+|++++++. .-+.++.+++.++-.++.++||+-- .+..++++.| +.
T Consensus 116 ~~~~~~~~~~~~a~~a~~~g~~GvV~sat----------~p~e~~~ir~~~~~~~~vtPGI~~~g~tp~~a~~~Gad~iV 185 (222)
T 4dbe_A 116 HEGWSTLFADYIKNVIREISPKGIVVGGT----------KLDHITQYRRDFEKMTIVSPGMGSQGGSYGDAVCAGADYEI 185 (222)
T ss_dssp STTCCCTTHHHHHHHHHHHCCSEEEECTT----------CHHHHHHHHHHCTTCEEEECCBSTTSBCTTHHHHHTCSEEE
T ss_pred CcchHHHHHHHHHHHHHHhCCCEEEECCC----------CHHHHHHHHHhCCCCEEEcCCcccCccCHHHHHHcCCCEEE
Confidence 2 221122478889999999999988642 1256677888774467788998732 1455666665 49
Q ss_pred hccccCC--CC
Q psy4398 253 FLRNHYP--VE 261 (306)
Q Consensus 253 vGrall~--~p 261 (306)
+||+++. ||
T Consensus 186 VGR~I~~A~dP 196 (222)
T 4dbe_A 186 IGRSIYNAGNP 196 (222)
T ss_dssp ECHHHHTSSSH
T ss_pred ECHHhcCCCCH
Confidence 9999986 56
No 404
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=91.95 E-value=0.9 Score=40.53 Aligned_cols=93 Identities=15% Similarity=0.186 Sum_probs=54.3
Q ss_pred HHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEeccCCChHHHHHHHHHHHHcCCcEE
Q psy4398 121 KKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAI 200 (306)
Q Consensus 121 ~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i 200 (306)
+.+++|+|.|||+.-+..+... .-+..+..+.+..+++++++. ++|+++-.. + .+.+++..++|++.|
T Consensus 60 ~~v~~GAdIIDIGgeSTrPga~----~v~~~eE~~Rv~pvI~~l~~~-~vpiSIDT~---~----~~Va~aAl~aGa~iI 127 (294)
T 2dqw_A 60 EMVAEGADILDLGAESTRPGAA----PVPVEEEKRRLLPVLEAVLSL-GVPVSVDTR---K----PEVAEEALKLGAHLL 127 (294)
T ss_dssp HHHHHTCSEEEEECC---------------CCHHHHHHHHHHHHHTT-CSCEEEECS---C----HHHHHHHHHHTCSEE
T ss_pred HHHHCCCCEEEECCCcCCCCCC----CCCHHHHHHHHHHHHHHHHhC-CCeEEEECC---C----HHHHHHHHHhCCCEE
Confidence 3455799999999854222100 012234556778888888776 889888666 2 456666666799977
Q ss_pred E-EcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEec
Q psy4398 201 G-VHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANG 235 (306)
Q Consensus 201 ~-v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~G 235 (306)
. +++. ..+-+..+.+..++|+|..-
T Consensus 128 NdVsg~----------~d~~m~~v~a~~~~~vVlmh 153 (294)
T 2dqw_A 128 NDVTGL----------RDERMVALAARHGVAAVVMH 153 (294)
T ss_dssp ECSSCS----------CCHHHHHHHHHHTCEEEEEC
T ss_pred EECCCC----------CChHHHHHHHHhCCCEEEEc
Confidence 5 3321 11233444455588888753
No 405
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=91.93 E-value=0.4 Score=43.23 Aligned_cols=66 Identities=15% Similarity=0.141 Sum_probs=38.8
Q ss_pred CHHHHHHHHH-HHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEec
Q psy4398 112 DPERALEAAK-KVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIR 177 (306)
Q Consensus 112 ~~~~~~~aa~-~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir 177 (306)
+++...+-|+ .+++|+|.|||+.-+..+.....+-.-+..+..+.+..+++++++..++||++-..
T Consensus 47 ~~~~al~~A~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~~~vpISIDT~ 113 (314)
T 3tr9_A 47 DLNSALRTAEKMVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKRFPQLISVDTS 113 (314)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHHCCSEEEEECS
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhhCCCeEEEeCC
Confidence 4556555555 44579999999875432210000000011233455777888888878899988766
No 406
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=91.76 E-value=2.1 Score=39.36 Aligned_cols=92 Identities=14% Similarity=0.156 Sum_probs=65.4
Q ss_pred cccEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcccCCC------------------------------C-C-------
Q psy4398 169 SIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKA------------------------------E-R------- 210 (306)
Q Consensus 169 ~~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~------------------------------~-~------- 210 (306)
+.|+++-+-...+.+...++++.++++|++.|.++-...- + .
T Consensus 132 ~~~~~~QLy~~~d~~~~~~~~~ra~~aG~~ai~it~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~g~~l~~~~~~ 211 (368)
T 2nli_A 132 GGPRWFQIYMAKDDQQNRDILDEAKSDGATAIILTADSTVSGNRDRDVKNKFVYPFGMPIVQRYLRGTAEGMSLNNIYGA 211 (368)
T ss_dssp TCCEEEEECCBSSHHHHHHHHHHHHHTTCSCEEEESBCC---CBC--------CCSCCHHHHHHHTTSGGGC-----CTT
T ss_pred CCCEEEEEeccCCHHHHHHHHHHHHHCCCCEEEEcCCCCcccchhHHHhhcccCcchhhhhhcccccCCCCchHHhhhhc
Confidence 4678887754346677889999999999999987642110 0 0
Q ss_pred CCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhh-------hhccccCCCC
Q psy4398 211 PRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNC-------AFLRNHYPVE 261 (306)
Q Consensus 211 ~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v-------~vGrall~~p 261 (306)
......|+.++.+++.+++||+.-| +.++++++.+.+.|+ --||.+..+|
T Consensus 212 ~d~~~~~~~i~~lr~~~~~PvivK~-v~~~e~a~~a~~~Gad~I~vs~~ggr~~~~g~ 268 (368)
T 2nli_A 212 SKQKISPRDIEEIAGHSGLPVFVKG-IQHPEDADMAIKRGASGIWVSNHGARQLYEAP 268 (368)
T ss_dssp BCSBCCHHHHHHHHHHSSSCEEEEE-ECSHHHHHHHHHTTCSEEEECCGGGTSCSSCC
T ss_pred cCchhhHHHHHHHHHHcCCCEEEEc-CCCHHHHHHHHHcCCCEEEEcCCCcCCCCCCC
Confidence 0123468889999999999998764 688999999998865 2245555555
No 407
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=91.74 E-value=1.2 Score=38.52 Aligned_cols=82 Identities=11% Similarity=0.189 Sum_probs=56.1
Q ss_pred CceEEEecCCCHHHHHHHHHHHhc-C--CCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhc-ccccEEEEec
Q psy4398 102 NKIILQIGTADPERALEAAKKVEH-D--VAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISN-LSIPVSCKIR 177 (306)
Q Consensus 102 ~p~ivql~g~~~~~~~~aa~~~~~-g--~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~-~~~pv~vKir 177 (306)
.|+++.+--.+.+ ++.+.+++ + ++.+++|+.. | ..+=.++++.+++. ..+++++|+-
T Consensus 15 ~~~ilalD~~~l~---~~~~~~~~~~~~v~~~Kv~~d~---------~-------~~~G~~~v~~lr~~~~~v~lD~kl~ 75 (245)
T 1eix_A 15 SPVVVALDYHNRD---DALAFVDKIDPRDCRLKVGKEM---------F-------TLFGPQFVRELQQRGFDIFLDLKFH 75 (245)
T ss_dssp CCEEEEECCSSHH---HHHHHHTTSCTTTCEEEEEHHH---------H-------HHHHHHHHHHHHHTTCCEEEEEEEC
T ss_pred CCeEEEECCCCHH---HHHHHHHHhCccCcEEEEcHHH---------H-------HHhCHHHHHHHHHCCCcEEEEeecc
Confidence 4777777555544 45555543 4 7898887443 0 22334577888876 6788999997
Q ss_pred cCCChHHHHHHHHHHHHcCCcEEEEcc
Q psy4398 178 VFHNEADTIALCKRLEACGIIAIGVHG 204 (306)
Q Consensus 178 ~g~~~~~~~~~a~~l~~~G~d~i~v~~ 204 (306)
..+++....++.+.++|+|.+++|.
T Consensus 76 --Dip~t~~~~i~~~~~~Gad~vTvH~ 100 (245)
T 1eix_A 76 --DIPNTAAHAVAAAADLGVWMVNVHA 100 (245)
T ss_dssp --SCHHHHHHHHHHHHHHTCSEEEEBG
T ss_pred --ccHHHHHHHHHHHHhCCCCEEEEec
Confidence 4445556678888999999999985
No 408
>3fxg_A Rhamnonate dehydratase; structural gemomics, enolase superfamily, NYSGXRC, target 9265J, lyase, structural genomics, PSI-2; 1.90A {Gibberella zeae ph-1} PDB: 2p0i_A
Probab=91.70 E-value=1.1 Score=42.46 Aligned_cols=138 Identities=10% Similarity=-0.035 Sum_probs=92.3
Q ss_pred hcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc--cccEEEEeccCCChHHHHHHHHHHHHcCCcEEE
Q psy4398 124 EHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--SIPVSCKIRVFHNEADTIALCKRLEACGIIAIG 201 (306)
Q Consensus 124 ~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~ 201 (306)
+.||..+-+.++.... .|. .+++.-.+.++++|+++ ++++.+-...+|+.+++.++++.|++.++.+|-
T Consensus 178 ~~Gf~~~KlKv~~~~~------~G~---~~~~~di~rv~avRea~G~d~~L~vDaN~~wt~~~Ai~~~~~Le~~~l~~iE 248 (455)
T 3fxg_A 178 AMGFWGGKVPLPFCPD------DGH---EGLRKNVEFLRKHREAVGPDFPIMVDCYMSLNVSYTIELVKACLDLNINWWE 248 (455)
T ss_dssp HHTCSCEEEECCCCGG------GHH---HHHHHHHHHHHHHHHHHCSSSCEEEECTTCCCHHHHHHHHHHTGGGCCSEEE
T ss_pred HcCCCEEEEcCCCCcc------ccc---ccHHHHHHHHHHHHHHhCCCCeEEEeCCCCCCHHHHHHHHHhcccCCcceec
Confidence 3589888887642110 111 13445567788888888 467777777789999999999999999987773
Q ss_pred EcccCCCCCCCCCCcHHHHHHHHhhC-CCcEEEecCCCCHHHHHHHHHhhh-hhccccCCCC-Cc----hHHHHHHHHHh
Q psy4398 202 VHGRTKAERPRHRNRIEMIRTLTQHL-KIPVIANGGSKEIVDYGGVFSLNC-AFLRNHYPVE-KL----PKTILYAHCKY 274 (306)
Q Consensus 202 v~~~~~~~~~~~p~~~~~v~~i~~~~-~ipvia~GGI~s~~~~~~~l~~~v-~vGrall~~p-~~----~~~~l~~~~~~ 274 (306)
++ ..+.+++..+++++.+ .+||.+.=.+.+..+++++++.+. .+ +--++ .+ .-+.+.+..++
T Consensus 249 -------EP-l~~dd~~~la~L~~~~~~iPIA~gEs~~s~~d~~~li~~~avDi---iq~d~~~~GGItea~kIa~lA~a 317 (455)
T 3fxg_A 249 -------EC-LSPDDTDGFALIKRAHPTVKFTTGEHEYSRYGFRKLVEGRNLDI---IQPDVMWLGGLTELLKVAALAAA 317 (455)
T ss_dssp -------CC-SCGGGGGGHHHHHHHCTTSEEEECTTCCHHHHHHHHHTTCCCSE---ECCCTTTSSCHHHHHHHHHHHHT
T ss_pred -------CC-CCcchHHHHHHHHHhCCCCeEECCCccCCHHHHHHHHHcCCCCE---EEECccccCCHHHHHHHHHHHHH
Confidence 22 2244778889999887 478776666888888888887422 11 11122 11 12367778888
Q ss_pred cCCCCCc
Q psy4398 275 KRFEVPK 281 (306)
Q Consensus 275 ~g~~~~~ 281 (306)
+|++...
T Consensus 318 ~Gv~v~~ 324 (455)
T 3fxg_A 318 YDVPVVP 324 (455)
T ss_dssp TTCCBCC
T ss_pred cCCEEEe
Confidence 8888543
No 409
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=91.68 E-value=3.9 Score=37.84 Aligned_cols=118 Identities=16% Similarity=0.196 Sum_probs=79.2
Q ss_pred CCHHHHHHHHHHHhc-CCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEeccCCChHHHHHHH
Q psy4398 111 ADPERALEAAKKVEH-DVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFHNEADTIALC 189 (306)
Q Consensus 111 ~~~~~~~~aa~~~~~-g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~a 189 (306)
++.+...+.++.+++ |+|.|-...-.|.+.. ..|-+ + ..+. .+++..+++..++|+..-+- +... ++
T Consensus 153 es~e~a~~~a~~~k~aGa~~vk~q~fkprts~--~~f~g-l--~~eg-l~~L~~~~~~~Gl~~~te~~---d~~~-~~-- 220 (385)
T 3nvt_A 153 ESYEQVAAVAESIKAKGLKLIRGGAFKPRTSP--YDFQG-L--GLEG-LKILKRVSDEYGLGVISEIV---TPAD-IE-- 220 (385)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEECBSSCCCSST--TSCCC-C--THHH-HHHHHHHHHHHTCEEEEECC---SGGG-HH--
T ss_pred CCHHHHHHHHHHHHHcCCCeEEcccccCCCCh--HhhcC-C--CHHH-HHHHHHHHHHcCCEEEEecC---CHHH-HH--
Confidence 467788888887865 9999988765544321 11111 1 1233 35666677777999887655 3332 23
Q ss_pred HHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCC-CCHHHHHHHHHhh
Q psy4398 190 KRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGS-KEIVDYGGVFSLN 250 (306)
Q Consensus 190 ~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI-~s~~~~~~~l~~~ 250 (306)
.+.+. +|.+-|.++.. .++++++.+.+ ++.||+..-|. .+++++..+++..
T Consensus 221 -~l~~~-vd~lkIgs~~~-------~n~~LL~~~a~-~gkPVilk~G~~~t~~e~~~Ave~i 272 (385)
T 3nvt_A 221 -VALDY-VDVIQIGARNM-------QNFELLKAAGR-VDKPILLKRGLSATIEEFIGAAEYI 272 (385)
T ss_dssp -HHTTT-CSEEEECGGGT-------TCHHHHHHHHT-SSSCEEEECCTTCCHHHHHHHHHHH
T ss_pred -HHHhh-CCEEEECcccc-------cCHHHHHHHHc-cCCcEEEecCCCCCHHHHHHHHHHH
Confidence 33456 99999977653 35678888774 68999999998 8999999888763
No 410
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=91.58 E-value=0.93 Score=40.87 Aligned_cols=81 Identities=12% Similarity=0.053 Sum_probs=54.9
Q ss_pred HHHHHHHHhcc-cccEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhC--CCcEEEe
Q psy4398 158 CNILTTLISNL-SIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHL--KIPVIAN 234 (306)
Q Consensus 158 ~eiv~~v~~~~-~~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~--~ipvia~ 234 (306)
.+.++++++.. ..++.|-+. +. +-++.+.++|+|.|-++.. +.+.++++.+.+ +++|.++
T Consensus 219 ~~Av~~ar~~~p~~kIeVEVd---tl----dea~eAl~aGaD~I~LDn~----------~~~~l~~av~~l~~~v~ieaS 281 (320)
T 3paj_A 219 RQAISTAKQLNPGKPVEVETE---TL----AELEEAISAGADIIMLDNF----------SLEMMREAVKINAGRAALENS 281 (320)
T ss_dssp HHHHHHHHHHSTTSCEEEEES---SH----HHHHHHHHTTCSEEEEESC----------CHHHHHHHHHHHTTSSEEEEE
T ss_pred HHHHHHHHHhCCCCeEEEEEC---CH----HHHHHHHHcCCCEEEECCC----------CHHHHHHHHHHhCCCCeEEEE
Confidence 45666666654 345666555 32 3344455689999999753 345666666655 6899999
Q ss_pred cCCCCHHHHHHHHHhhh---hhccc
Q psy4398 235 GGSKEIVDYGGVFSLNC---AFLRN 256 (306)
Q Consensus 235 GGI~s~~~~~~~l~~~v---~vGra 256 (306)
|||+ .+++.++.+.|+ .+|..
T Consensus 282 GGIt-~~~I~~~a~tGVD~isvGal 305 (320)
T 3paj_A 282 GNIT-LDNLKECAETGVDYISVGAL 305 (320)
T ss_dssp SSCC-HHHHHHHHTTTCSEEECTHH
T ss_pred CCCC-HHHHHHHHHcCCCEEEECce
Confidence 9986 888998888776 66653
No 411
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=91.44 E-value=2.7 Score=40.38 Aligned_cols=106 Identities=14% Similarity=0.065 Sum_probs=69.3
Q ss_pred cccEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcccCCC-----------------------C----C-----------
Q psy4398 169 SIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKA-----------------------E----R----------- 210 (306)
Q Consensus 169 ~~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~-----------------------~----~----------- 210 (306)
..|.++.+-.+.+.+.+.+++++++++|+++|.+|--... + .
T Consensus 246 ~~~~~~QLy~~~d~~~~~~~~~rae~aG~~al~itvd~p~~g~R~~~~r~g~~~p~~~~~~~~g~~~~~~~g~~~~~~~~ 325 (511)
T 1kbi_A 246 KQIQWYQLYVNSDRKITDDLVKNVEKLGVKALFVTVDAPSLGQREKDMKLKFSNTKAGPKAMKKTNVEESQGASRALSKF 325 (511)
T ss_dssp SCCEEEEECCCSSHHHHHHHHHHHHHHTCSCEEEECSCSSCCCCHHHHHHHHTTCC-------CCCCSSCCCGGGGCBTT
T ss_pred CCCeEEEEeecCCHHHHHHHHHHHHHcCCCEEEEeCCCCCccccHHHHhccCCCCcccccccccccccccccHHHHHhhc
Confidence 4578888865566677888999999999998776532110 0 0
Q ss_pred CCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhh---hh----ccccCCCC-CchHH-HHHHHHHhc
Q psy4398 211 PRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNC---AF----LRNHYPVE-KLPKT-ILYAHCKYK 275 (306)
Q Consensus 211 ~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v---~v----Grall~~p-~~~~~-~l~~~~~~~ 275 (306)
......|+.++++++.+++||+.- |+.+.++++.+.+.|+ .+ ||.+...+ .+..+ .+.+.+.++
T Consensus 326 ~d~~~~~~~i~~lr~~~~~PvivK-gv~~~e~A~~a~~aGad~I~vs~hgG~~~d~~~~~~~~l~~v~~~v~~~ 398 (511)
T 1kbi_A 326 IDPSLTWKDIEELKKKTKLPIVIK-GVQRTEDVIKAAEIGVSGVVLSNHGGRQLDFSRAPIEVLAETMPILEQR 398 (511)
T ss_dssp BCTTCCHHHHHHHHHHCSSCEEEE-EECSHHHHHHHHHTTCSEEEECCTTTTSSTTCCCHHHHHHHHHHHHHTT
T ss_pred cChHhHHHHHHHHHHHhCCcEEEE-eCCCHHHHHHHHHcCCCEEEEcCCCCccCCCCCchHHHHHHHHHHHHhh
Confidence 011235889999999999999976 4567999999888865 22 45443333 22222 555555543
No 412
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=91.23 E-value=3 Score=36.99 Aligned_cols=89 Identities=10% Similarity=0.075 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHhcc--cccEEEEeccCCChHHHHHHHHHHHHcCCc-EEEEcccCCCC----CCC-CC-CcHHHHHHHHh
Q psy4398 155 DIACNILTTLISNL--SIPVSCKIRVFHNEADTIALCKRLEACGII-AIGVHGRTKAE----RPR-HR-NRIEMIRTLTQ 225 (306)
Q Consensus 155 ~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~~a~~l~~~G~d-~i~v~~~~~~~----~~~-~p-~~~~~v~~i~~ 225 (306)
+.+.+.++..++.. +.|+.+-+. +.+.++..+.++.++++|+| +|.++-..+.. .+. .+ ..++.++.+++
T Consensus 77 ~~~~~~~~~~~~~~~~~~p~~~~i~-g~~~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~ 155 (311)
T 1jub_A 77 DYYLDYVLKNQKENAQEGPIFFSIA-GMSAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFT 155 (311)
T ss_dssp HHHHHHHHHHHHHTCSSSCCEEEEC-CSSHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEcC-CCCHHHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHH
Confidence 33334344444344 688888776 46778899999999999999 99986432111 111 11 12467788888
Q ss_pred hCCCcEEE--ecCCCCHHHHHH
Q psy4398 226 HLKIPVIA--NGGSKEIVDYGG 245 (306)
Q Consensus 226 ~~~ipvia--~GGI~s~~~~~~ 245 (306)
.+++||+. ..++ +.++..+
T Consensus 156 ~~~~Pv~vKi~~~~-~~~~~~~ 176 (311)
T 1jub_A 156 FFTKPLGVKLPPYF-DLVHFDI 176 (311)
T ss_dssp TCCSCEEEEECCCC-SHHHHHH
T ss_pred hcCCCEEEEECCCC-CHHHHHH
Confidence 88899886 3443 5555544
No 413
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=91.16 E-value=1.7 Score=36.48 Aligned_cols=69 Identities=13% Similarity=0.151 Sum_probs=51.4
Q ss_pred ChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEE-------ecCC---CCHHHHHHHHHhh
Q psy4398 181 NEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIA-------NGGS---KEIVDYGGVFSLN 250 (306)
Q Consensus 181 ~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia-------~GGI---~s~~~~~~~l~~~ 250 (306)
+.+...++++.++++|++++++. ..+.++++++.+++|+++ .+++ .+.++++.+++.+
T Consensus 21 ~~~~~~~~a~~~~~~Ga~~i~~~------------~~~~i~~i~~~~~~pv~~~~~~~~~~~~~~i~~~~~~i~~~~~~G 88 (223)
T 1y0e_A 21 SSFIMSKMALAAYEGGAVGIRAN------------TKEDILAIKETVDLPVIGIVKRDYDHSDVFITATSKEVDELIESQ 88 (223)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEE------------SHHHHHHHHHHCCSCEEEECBCCCTTCCCCBSCSHHHHHHHHHHT
T ss_pred CCccHHHHHHHHHHCCCeeeccC------------CHHHHHHHHHhcCCCEEeeeccCCCccccccCCcHHHHHHHHhCC
Confidence 44678999999999999999873 347889999999999974 2344 4567777777765
Q ss_pred h---hhccccCCCC
Q psy4398 251 C---AFLRNHYPVE 261 (306)
Q Consensus 251 v---~vGrall~~p 261 (306)
+ .++.....+|
T Consensus 89 ad~v~l~~~~~~~p 102 (223)
T 1y0e_A 89 CEVIALDATLQQRP 102 (223)
T ss_dssp CSEEEEECSCSCCS
T ss_pred CCEEEEeeecccCc
Confidence 4 6666655555
No 414
>3qm3_A Fructose-bisphosphate aldolase; structural genomics, center for structural genomics of infec diseases, csgid, TIM beta/alpha-barrel, lyase; 1.85A {Campylobacter jejuni} SCOP: c.1.10.2
Probab=91.11 E-value=4.8 Score=36.79 Aligned_cols=140 Identities=13% Similarity=0.095 Sum_probs=83.8
Q ss_pred CCCceEEEecCCCH---HHHHHHHH-------HH-hcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc
Q psy4398 100 EKNKIILQIGTADP---ERALEAAK-------KV-EHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL 168 (306)
Q Consensus 100 ~~~p~ivql~g~~~---~~~~~aa~-------~~-~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~ 168 (306)
.+.|+++.+-|... +.+..+.+ .+ +.||.-|.+..|. -.++++.+...++++...+ .
T Consensus 98 ~~VPVaLHlDHg~~~~~~~i~~~i~a~~~~~~~~~~~GFtSVMiDgS~-----------lp~eENI~~Tk~vv~~ah~-~ 165 (357)
T 3qm3_A 98 YGVPVILHTDHAARKLLPWIDGLIEANAQYKKTHGQALFSSHMLDLSE-----------ESLEENLSTCEVYLQKLDA-L 165 (357)
T ss_dssp HTCEEEEEECCCCGGGHHHHHHHHHHHHHHHHHHSSCSCSEEECCCTT-----------SCHHHHHHHHHHHHHHHHH-H
T ss_pred CCCcEEEECCCCCccchHHHHHHHHHhHHHHhhhcCCCCCEEEEeCCC-----------CCHHHHHHHHHHHHHHHHH-c
Confidence 46899999987643 12222221 11 3489999996553 2345677888888887754 3
Q ss_pred cccEEEEecc-C-----------------CChHHHHHHHHHHHH-cCCcEEEEcccCCCCCCC-C--CCcHHHHHHHHhh
Q psy4398 169 SIPVSCKIRV-F-----------------HNEADTIALCKRLEA-CGIIAIGVHGRTKAERPR-H--RNRIEMIRTLTQH 226 (306)
Q Consensus 169 ~~pv~vKir~-g-----------------~~~~~~~~~a~~l~~-~G~d~i~v~~~~~~~~~~-~--p~~~~~v~~i~~~ 226 (306)
++.|-.-+.. | -++++..++++..-. .|+|.|-+.=.+..+.|. + ..+++.++++++.
T Consensus 166 gvsVEaELG~igG~Edgv~~~~~~~~~~yT~Peea~~Fv~~tg~~~gvD~LAvaiGt~HG~Yk~g~p~L~~~~L~~i~~~ 245 (357)
T 3qm3_A 166 GVALEIELGCTGGEEDGVDNTGIDNSKLYTQPEDVALAYERLGKISDKFSIAASFGNVHGVYKPGNVSLQPEILKNSQKF 245 (357)
T ss_dssp TCEEEEECCCCCC-----CCSSTTCTTTSCCHHHHHHHHHHHTTTCSCEEEECCSSCCCSSCCSSCCCCCTHHHHHHHHH
T ss_pred CCeEEEEeeeeccccCCccccccccccccCCHHHHHHHHHHhCCCCcccEEEEecCCccCCcCCCCCCCCHHHHHHHHHH
Confidence 6666655543 1 123344444443321 146788765444444442 1 2467777776553
Q ss_pred ----C------CCcEEEecCCCC-HHHHHHHHHhhh
Q psy4398 227 ----L------KIPVIANGGSKE-IVDYGGVFSLNC 251 (306)
Q Consensus 227 ----~------~ipvia~GGI~s-~~~~~~~l~~~v 251 (306)
+ ++|++..||-.. .++.+++++.|+
T Consensus 246 i~~~~~~~~~~~vpLVlHGgSG~p~e~i~~ai~~GV 281 (357)
T 3qm3_A 246 VKDKFALNSDKPINFVFHGGSGSELKDIKNAVSYGV 281 (357)
T ss_dssp HHHHTTCSCSCCSCEEECSCTTCCHHHHHHHHHTTE
T ss_pred HHHHhccccCCCCcEEEeCCCCCCHHHHHHHHHCCc
Confidence 2 689999999765 556788888765
No 415
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=90.91 E-value=0.57 Score=41.58 Aligned_cols=78 Identities=14% Similarity=0.106 Sum_probs=56.7
Q ss_pred cccccEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcccC-----CCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHH
Q psy4398 167 NLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRT-----KAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIV 241 (306)
Q Consensus 167 ~~~~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~-----~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~ 241 (306)
.+..|+.+-++ + .++++.+.++|++.|++.... ..+......+++.++++++.+++|++.+.++.+.+
T Consensus 19 ~~~~~~i~~~~--~-----~~~a~~~~~~Ga~~i~~~e~v~~~~~~~~G~~~~~~~~~i~~i~~~~~~Pvi~~~~~~~~~ 91 (297)
T 2zbt_A 19 MFKGGVIMDVT--T-----PEQAVIAEEAGAVAVMALERVPADIRAQGGVARMSDPKIIKEIMAAVSIPVMAKVRIGHFV 91 (297)
T ss_dssp GGTTEEEEEES--S-----HHHHHHHHHHTCSEEEECSSCHHHHHHTTCCCCCCCHHHHHHHHTTCSSCEEEEEETTCHH
T ss_pred HhhCCeeeeec--h-----HHHHHHHHHCCCcEEEeccccchHHHhhcCCccCCCHHHHHHHHHhcCCCeEEEeccCCHH
Confidence 34557777666 2 789999999999999873210 01111123467899999999999999988888888
Q ss_pred HHHHHHHhhh
Q psy4398 242 DYGGVFSLNC 251 (306)
Q Consensus 242 ~~~~~l~~~v 251 (306)
+++.+++.++
T Consensus 92 ~~~~~~~aGa 101 (297)
T 2zbt_A 92 EAMILEAIGV 101 (297)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHCCC
Confidence 8888887764
No 416
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=90.87 E-value=2.5 Score=38.43 Aligned_cols=123 Identities=11% Similarity=0.091 Sum_probs=0.0
Q ss_pred EEec---CCCHHHHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEe--ccCC
Q psy4398 106 LQIG---TADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKI--RVFH 180 (306)
Q Consensus 106 vql~---g~~~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKi--r~g~ 180 (306)
+|+. +...+++.+.+..+ |+|.|-+..++ ++.+...++++.+++. +..+.+-+ ....
T Consensus 85 i~~l~~p~~~~~~~i~~a~~a--Gvd~v~I~~~~---------------s~~~~~~~~i~~ak~~-G~~v~~~~~~a~~~ 146 (345)
T 1nvm_A 85 IATLLLPGIGSVHDLKNAYQA--GARVVRVATHC---------------TEADVSKQHIEYARNL-GMDTVGFLMMSHMI 146 (345)
T ss_dssp EEEEECBTTBCHHHHHHHHHH--TCCEEEEEEET---------------TCGGGGHHHHHHHHHH-TCEEEEEEESTTSS
T ss_pred EEEEecCCcccHHHHHHHHhC--CcCEEEEEEec---------------cHHHHHHHHHHHHHHC-CCEEEEEEEeCCCC
Q ss_pred ChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhC--CCcEEE------ecCCCCHHHHHHHHHhhh
Q psy4398 181 NEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHL--KIPVIA------NGGSKEIVDYGGVFSLNC 251 (306)
Q Consensus 181 ~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~--~ipvia------~GGI~s~~~~~~~l~~~v 251 (306)
+.+...++++.+.+.|++.|.+.+.+....+.. -.++++.+++.+ ++||-. .-+ ......++++|+
T Consensus 147 ~~e~~~~ia~~~~~~Ga~~i~l~DT~G~~~P~~--v~~lv~~l~~~~~~~~pi~~H~Hn~~G~a---vAn~laA~~aGa 220 (345)
T 1nvm_A 147 PAEKLAEQGKLMESYGATCIYMADSGGAMSMND--IRDRMRAFKAVLKPETQVGMHAHHNLSLG---VANSIVAVEEGC 220 (345)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECTTCCCCHHH--HHHHHHHHHHHSCTTSEEEEECBCTTSCH---HHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCcCccCHHH--HHHHHHHHHHhcCCCceEEEEECCCccHH---HHHHHHHHHcCC
No 417
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=90.86 E-value=0.89 Score=40.73 Aligned_cols=95 Identities=14% Similarity=0.092 Sum_probs=62.6
Q ss_pred ecCCCCCCceEEEecC--------CCH-HHHHHHHHHHhc-CCCEEEEccCCCccccccCCccccccCChHHHHHHHHHH
Q psy4398 95 RTCPREKNKIILQIGT--------ADP-ERALEAAKKVEH-DVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTL 164 (306)
Q Consensus 95 ~~~~~~~~p~ivql~g--------~~~-~~~~~aa~~~~~-g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v 164 (306)
+.+++.+.|+++.+.. .++ +...++++.+.+ |+|.|-++... +++| .++.+.++++..
T Consensus 149 ~~~~~~G~p~lv~~~~~g~~v~~~~~~~~~v~~aa~~a~~lGaD~iKv~~~~-------~~~g-----~~~~~~~vv~~~ 216 (304)
T 1to3_A 149 ELCHSNGLLSIIEPVVRPPRCGDKFDREQAIIDAAKELGDSGADLYKVEMPL-------YGKG-----ARSDLLTASQRL 216 (304)
T ss_dssp HHHHTTTCEEEEEEEECCCSSCSCCCHHHHHHHHHHHHTTSSCSEEEECCGG-------GGCS-----CHHHHHHHHHHH
T ss_pred HHHHHcCCcEEEEEECCCCccccCCChhHHHHHHHHHHHHcCCCEEEeCCCc-------CCCC-----CHHHHHHHHHhc
Confidence 3455678888888752 234 667777887775 99988886432 0122 566777777776
Q ss_pred HhcccccEEEEeccCCChHHHHHHHHHHHHcCCcEEEE
Q psy4398 165 ISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGV 202 (306)
Q Consensus 165 ~~~~~~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v 202 (306)
...+..|. |=+..|.+.++..+.++.+.++|++++.+
T Consensus 217 ~~~~~~P~-Vv~aGG~~~~~~~~~~~~a~~aGa~Gv~v 253 (304)
T 1to3_A 217 NGHINMPW-VILSSGVDEKLFPRAVRVAMEAGASGFLA 253 (304)
T ss_dssp HHTCCSCE-EECCTTSCTTTHHHHHHHHHHTTCCEEEE
T ss_pred cccCCCCe-EEEecCCCHHHHHHHHHHHHHcCCeEEEE
Confidence 55566662 33344566667777777777889998876
No 418
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=90.84 E-value=1.3 Score=38.85 Aligned_cols=77 Identities=12% Similarity=0.141 Sum_probs=44.6
Q ss_pred HHHHHHHHH-HHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEeccCCChHHHHHHHHH
Q psy4398 113 PERALEAAK-KVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFHNEADTIALCKR 191 (306)
Q Consensus 113 ~~~~~~aa~-~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~a~~ 191 (306)
.+...+-++ .+++|+|.|||..-+-.+.... -+..+..+.+.-+++++++ .++|++|-.+- .+.++.
T Consensus 29 ~~~a~~~a~~m~~~GAdiIDIGgeSTRPga~~----vs~eeE~~Rv~pvi~~l~~-~~v~iSIDT~~-------~~Va~~ 96 (270)
T 4hb7_A 29 VETAINRVKAMIDEGADIIDVGGVSTRPGHEM----VTLEEELNRVLPVVEAIVG-FDVKISVDTFR-------SEVAEA 96 (270)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEESCCCSTTCCC----CCHHHHHHHHHHHHHHHTT-SSSEEEEECSC-------HHHHHH
T ss_pred HHHHHHHHHHHHHCCCCEEEECCccCCCCCCC----CchHHHHHHHHHHHHHhhc-CCCeEEEECCC-------HHHHHH
Confidence 444444444 4567999999975543321100 1122334556677777765 57888887662 355566
Q ss_pred HHHcCCcEEE
Q psy4398 192 LEACGIIAIG 201 (306)
Q Consensus 192 l~~~G~d~i~ 201 (306)
+.++|++.|.
T Consensus 97 al~aGa~iIN 106 (270)
T 4hb7_A 97 CLKLGVDMIN 106 (270)
T ss_dssp HHHHTCCEEE
T ss_pred HHHhccceec
Confidence 6667777665
No 419
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=90.80 E-value=0.9 Score=40.32 Aligned_cols=89 Identities=8% Similarity=0.034 Sum_probs=57.6
Q ss_pred HHHHHHHHhccc-ccEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcH-HHHHHHHhhC-CCcEEEe
Q psy4398 158 CNILTTLISNLS-IPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRI-EMIRTLTQHL-KIPVIAN 234 (306)
Q Consensus 158 ~eiv~~v~~~~~-~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~-~~v~~i~~~~-~ipvia~ 234 (306)
.+.++++++..+ .++.|-+. + .+-++.+.++|+|.|.++..+ |..+ +.++.+++.. ++++.++
T Consensus 182 ~~av~~ar~~~~~~~I~Vev~---t----~eea~eal~aGaD~I~LDn~~-------~~~~~~~v~~l~~~~~~v~ieaS 247 (284)
T 1qpo_A 182 VDALRAVRNAAPDLPCEVEVD---S----LEQLDAVLPEKPELILLDNFA-------VWQTQTAVQRRDSRAPTVMLESS 247 (284)
T ss_dssp HHHHHHHHHHCTTSCEEEEES---S----HHHHHHHGGGCCSEEEEETCC-------HHHHHHHHHHHHHHCTTCEEEEE
T ss_pred HHHHHHHHHhCCCCCEEEEeC---C----HHHHHHHHHcCCCEEEECCCC-------HHHHHHHHHHhhccCCCeEEEEE
Confidence 456677766542 25666555 2 355555666999999998642 2122 3344454422 5899999
Q ss_pred cCCCCHHHHHHHHHhhh---hhccccCCCC
Q psy4398 235 GGSKEIVDYGGVFSLNC---AFLRNHYPVE 261 (306)
Q Consensus 235 GGI~s~~~~~~~l~~~v---~vGrall~~p 261 (306)
|||+ ++++.++.+.++ .+|+....-|
T Consensus 248 GGIt-~~~i~~~a~tGVD~isvG~l~~~a~ 276 (284)
T 1qpo_A 248 GGLS-LQTAATYAETGVDYLAVGALTHSVR 276 (284)
T ss_dssp SSCC-TTTHHHHHHTTCSEEECGGGTSSBC
T ss_pred CCCC-HHHHHHHHhcCCCEEEECHHHcCCC
Confidence 9985 788888888765 8888666544
No 420
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=90.80 E-value=7.2 Score=33.42 Aligned_cols=132 Identities=10% Similarity=0.070 Sum_probs=73.2
Q ss_pred CceEEEec-CCCHHHHHHHHHHHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhc--cc--cc--EE
Q psy4398 102 NKIILQIG-TADPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISN--LS--IP--VS 173 (306)
Q Consensus 102 ~p~ivql~-g~~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~--~~--~p--v~ 173 (306)
.++++-+. +..|+....+++.+. .|+|.|.+|... | .+.+.+.++.+++. .+ .| +.
T Consensus 56 ~~v~lD~kl~Dip~t~~~~~~~~~~~Gad~vTvH~~~----------g------~~~l~~~~~~~~~~~~~G~~~~~~la 119 (246)
T 2yyu_A 56 HAVFLDLKLHDIPNTVKQAMKGLARVGADLVNVHAAG----------G------RRMMEAAIEGLDAGTPSGRMRPRCIA 119 (246)
T ss_dssp CEEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEEGGG----------C------HHHHHHHHHHHHHHSCSSSCCCEEEE
T ss_pred CeEEEEeecccchHHHHHHHHHHHhcCCCEEEEECCC----------C------HHHHHHHHHHHHhhcccCCcCCCEEE
Confidence 45555543 344555455555454 599999998442 1 23345666666652 23 34 22
Q ss_pred EEeccCCChHH--------------HHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCC-CcEEEecCCC
Q psy4398 174 CKIRVFHNEAD--------------TIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLK-IPVIANGGSK 238 (306)
Q Consensus 174 vKir~g~~~~~--------------~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~-ipvia~GGI~ 238 (306)
+......+.++ ...+++...+.|.++++.. .++ ++++++..+ .+++..|||+
T Consensus 120 v~~~Ts~~~~~l~~~~~~~~~~~d~Vl~ma~~~~~~G~~g~V~~------------~~e-i~~lr~~~~~~~i~V~gGI~ 186 (246)
T 2yyu_A 120 VTQLTSTDERMLHEELWISRPLVETVAHYAALAKESGLDGVVCS------------ANE-AAFIKERCGASFLAVTPGIR 186 (246)
T ss_dssp ESSCTTCCHHHHHHTSCCCSCHHHHHHHHHHHHHHHTCCEEECC------------HHH-HHHHHHHHCTTSEEEECCCC
T ss_pred EEeCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCCEEEeC------------HHH-HHHHHHhcCCCCEEEeCCcC
Confidence 33211111111 2233333456788887532 235 677777663 5689999998
Q ss_pred CH--H--------HHHHHHHhh---hhhccccCCCCC
Q psy4398 239 EI--V--------DYGGVFSLN---CAFLRNHYPVEK 262 (306)
Q Consensus 239 s~--~--------~~~~~l~~~---v~vGrall~~p~ 262 (306)
.- . +..++++.| +.+||+++..+.
T Consensus 187 ~~g~~~~dq~rv~t~~~a~~aGad~iVvGr~I~~a~d 223 (246)
T 2yyu_A 187 FADDAAHDQVRVVTPRKARALGSDYIVIGRSLTRAAD 223 (246)
T ss_dssp CCC-------CCCCHHHHHHHTCSEEEECHHHHTSSS
T ss_pred CCCCCcccccccCCHHHHHHcCCCEEEECHhhcCCCC
Confidence 31 0 355666654 499999987443
No 421
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=90.74 E-value=3.3 Score=37.36 Aligned_cols=128 Identities=9% Similarity=-0.032 Sum_probs=73.7
Q ss_pred HHHHHH-HH-hcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEeccCCChHHHHHHHHHHH
Q psy4398 116 ALEAAK-KV-EHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFHNEADTIALCKRLE 193 (306)
Q Consensus 116 ~~~aa~-~~-~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~a~~l~ 193 (306)
..+.|+ ++ ++|+|.|+|+.-+..+. + ..-.++...++++++++.+++|+++-=. .+.+.-.+.+++..
T Consensus 82 ~~~~A~~~v~~~GAdiIDIg~eStrP~-------~-~~vs~ee~~~~V~~v~~~~~vPlsIDg~--~~~T~~~eV~eaAl 151 (323)
T 4djd_D 82 PGRWAQKCVAEYGADLIYLKLDGADPE-------G-ANHSVDQCVATVKEVLQAVGVPLVVVGC--GDVEKDHEVLEAVA 151 (323)
T ss_dssp HHHHHHHHHHTTCCSEEEEECGGGCTT-------T-TCCCHHHHHHHHHHHHHHCCSCEEEECC--SCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEcCccCCCC-------C-CCCCHHHHHHHHHHHHhhCCceEEEECC--CCCCCCHHHHHHHH
Confidence 444455 44 45999999986543321 1 1123455677889998888999988733 23344567777778
Q ss_pred HcCCcEE-EEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhhhhcc---ccCCCC
Q psy4398 194 ACGIIAI-GVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNCAFLR---NHYPVE 261 (306)
Q Consensus 194 ~~G~d~i-~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v~vGr---all~~p 261 (306)
++|++.. .|.+.+.+ +++-+..+....+.|||+.- ..+.+-++++.+.....|= -++-||
T Consensus 152 eagag~~~lINsv~~~-------~~~~m~~laa~~g~~vVlmh-~~d~~~~~~l~~~a~~~GI~~e~IIlDP 215 (323)
T 4djd_D 152 EAAAGENLLLGNAEQE-------NYKSLTAACMVHKHNIIARS-PLDINICKQLNILINEMNLPLDHIVIDP 215 (323)
T ss_dssp HHTTTSCCEEEEEBTT-------BCHHHHHHHHHHTCEEEEEC-SSCHHHHHHHHHHHHTTTCCGGGEEEEC
T ss_pred HhcCCCCCeEEECCcc-------cHHHHHHHHHHhCCeEEEEc-cchHHHHHHHHHHHHHcCCCHHHEEEeC
Confidence 8887631 22222111 23445556666789999865 2345555555543333332 244566
No 422
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=90.57 E-value=0.85 Score=40.50 Aligned_cols=82 Identities=10% Similarity=-0.049 Sum_probs=54.3
Q ss_pred HHHHHHHHHhcc-cccEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhC--CCcEEE
Q psy4398 157 ACNILTTLISNL-SIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHL--KIPVIA 233 (306)
Q Consensus 157 ~~eiv~~v~~~~-~~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~--~ipvia 233 (306)
+.+.++++++.. ..++.|-+. + .+-++.+.++|+|.|-++.. ..+.++++.+.+ ++++.+
T Consensus 185 i~~Av~~ar~~~~~~~IeVEv~---t----l~ea~eAl~aGaD~I~LDn~----------~~~~l~~av~~~~~~v~iea 247 (287)
T 3tqv_A 185 IAKAVTKAKKLDSNKVVEVEVT---N----LDELNQAIAAKADIVMLDNF----------SGEDIDIAVSIARGKVALEV 247 (287)
T ss_dssp HHHHHHHHHHHCTTSCEEEEES---S----HHHHHHHHHTTCSEEEEESC----------CHHHHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHHHhhCCCCcEEEEeC---C----HHHHHHHHHcCCCEEEEcCC----------CHHHHHHHHHhhcCCceEEE
Confidence 345666666543 456666555 2 24445556689999999753 225555555554 689999
Q ss_pred ecCCCCHHHHHHHHHhhh---hhccc
Q psy4398 234 NGGSKEIVDYGGVFSLNC---AFLRN 256 (306)
Q Consensus 234 ~GGI~s~~~~~~~l~~~v---~vGra 256 (306)
+|||+ .+++.++.+.|+ .+|..
T Consensus 248 SGGIt-~~~i~~~a~tGVD~IsvGal 272 (287)
T 3tqv_A 248 SGNID-RNSIVAIAKTGVDFISVGAI 272 (287)
T ss_dssp ESSCC-TTTHHHHHTTTCSEEECSHH
T ss_pred ECCCC-HHHHHHHHHcCCCEEEEChh
Confidence 99995 788888888766 55544
No 423
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=90.55 E-value=5.7 Score=33.82 Aligned_cols=133 Identities=14% Similarity=0.183 Sum_probs=81.2
Q ss_pred CCceEEEe------cCCCHHHHHHHHH---HHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccc
Q psy4398 101 KNKIILQI------GTADPERALEAAK---KVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSI 170 (306)
Q Consensus 101 ~~p~ivql------~g~~~~~~~~aa~---~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~ 170 (306)
+.|+.+=| +.++.+++....+ .++ .|+|+|-+-+-.|.. . =|.+...+++++.. +.
T Consensus 54 ~ipV~vMIRPR~GdF~Ys~~E~~~M~~Di~~~~~~GadGvV~G~Lt~dg---------~--iD~~~~~~Li~~a~---~~ 119 (224)
T 2bdq_A 54 GISVAVMIRPRGGNFVYNDLELRIMEEDILRAVELESDALVLGILTSNN---------H--IDTEAIEQLLPATQ---GL 119 (224)
T ss_dssp TCEEEEECCSSSSCSCCCHHHHHHHHHHHHHHHHTTCSEEEECCBCTTS---------S--BCHHHHHHHHHHHT---TC
T ss_pred CCceEEEECCCCCCCcCCHHHHHHHHHHHHHHHHcCCCEEEEeeECCCC---------C--cCHHHHHHHHHHhC---CC
Confidence 34555555 3356777665544 344 399999986655442 1 26777788887654 45
Q ss_pred cEEEEeccCCCh--HHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhC--CCcEEEecCCCCHHHHHHH
Q psy4398 171 PVSCKIRVFHNE--ADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHL--KIPVIANGGSKEIVDYGGV 246 (306)
Q Consensus 171 pv~vKir~g~~~--~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~--~ipvia~GGI~s~~~~~~~ 246 (306)
++..=... ... .+..+..+.|.+.|++.|.-+|...... -...++.++++.+.. ++-|++.|||+ .+++.++
T Consensus 120 ~vTFHRAF-D~~~~~d~~~ale~L~~lGv~rILTSG~~~~~~--a~~g~~~L~~Lv~~a~~ri~Im~GgGV~-~~Ni~~l 195 (224)
T 2bdq_A 120 PLVFHMAF-DVIPKSDQKKSIDQLVALGFTRILLHGSSNGEP--IIENIKHIKALVEYANNRIEIMVGGGVT-AENYQYI 195 (224)
T ss_dssp CEEECGGG-GGSCTTTHHHHHHHHHHTTCCEEEECSCSSCCC--GGGGHHHHHHHHHHHTTSSEEEECSSCC-TTTHHHH
T ss_pred eEEEECch-hccCCcCHHHHHHHHHHcCCCEEECCCCCCCCc--HHHHHHHHHHHHHhhCCCeEEEeCCCCC-HHHHHHH
Confidence 55443331 112 4456677888889999998766433211 123567777776543 57888889987 4666666
Q ss_pred HHh-hh
Q psy4398 247 FSL-NC 251 (306)
Q Consensus 247 l~~-~v 251 (306)
++. ++
T Consensus 196 ~~~tGv 201 (224)
T 2bdq_A 196 CQETGV 201 (224)
T ss_dssp HHHHTC
T ss_pred HHhhCC
Confidence 643 44
No 424
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=90.52 E-value=1.6 Score=37.72 Aligned_cols=110 Identities=15% Similarity=0.134 Sum_probs=66.3
Q ss_pred ceEEEecCCCHHHHHHHHHHHhc-C--CCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhc-ccccEEEEecc
Q psy4398 103 KIILQIGTADPERALEAAKKVEH-D--VAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISN-LSIPVSCKIRV 178 (306)
Q Consensus 103 p~ivql~g~~~~~~~~aa~~~~~-g--~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~-~~~pv~vKir~ 178 (306)
++++.+--.+.+ ++.+.+++ + ++.+++|+.. | ..+=.++++.+++. ..+++++|+-
T Consensus 6 ~lilalD~~~l~---~~~~~v~~~~~~v~~~Kv~~d~---------~-------~~~G~~~v~~lr~~~~~v~lD~kl~- 65 (246)
T 2yyu_A 6 PFIVALDFPSKQ---EVERFLRPFAGTPLFVKVGMEL---------Y-------YQEGPAIVAFLKEQGHAVFLDLKLH- 65 (246)
T ss_dssp CEEEECCCSSHH---HHHHHHGGGTTSCCEEEECHHH---------H-------HHHTHHHHHHHHHTTCEEEEEEEEC-
T ss_pred CeEEEeCCCCHH---HHHHHHHHhcccccEEEeCHHH---------H-------HHhCHHHHHHHHHCCCeEEEEeecc-
Confidence 566666544544 44444543 3 6888887543 0 12223467777776 5788899997
Q ss_pred CCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcH-HHHHHHHhh--CC--Cc-EEEecCCCC
Q psy4398 179 FHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRI-EMIRTLTQH--LK--IP-VIANGGSKE 239 (306)
Q Consensus 179 g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~-~~v~~i~~~--~~--ip-via~GGI~s 239 (306)
..++.....++.+.++|+|.+++|.-. +...+ +.+..+++. .+ .| +++.-=.++
T Consensus 66 -Dip~t~~~~~~~~~~~Gad~vTvH~~~------g~~~l~~~~~~~~~~~~~G~~~~~~lav~~~Ts 125 (246)
T 2yyu_A 66 -DIPNTVKQAMKGLARVGADLVNVHAAG------GRRMMEAAIEGLDAGTPSGRMRPRCIAVTQLTS 125 (246)
T ss_dssp -SCHHHHHHHHHHHHHTTCSEEEEEGGG------CHHHHHHHHHHHHHHSCSSSCCCEEEEESSCTT
T ss_pred -cchHHHHHHHHHHHhcCCCEEEEECCC------CHHHHHHHHHHHHhhcccCCcCCCEEEEEeCCC
Confidence 444555667888899999999999743 11112 345556552 33 45 666554444
No 425
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=90.51 E-value=1.3 Score=39.13 Aligned_cols=81 Identities=14% Similarity=0.106 Sum_probs=57.4
Q ss_pred cccccCChHHHHHHHHHHHhcccccEEEEeccCCChHHHHHHHHHHHHcCCcEEE-EcccCCCCCCCC-CCcHHHHHHHH
Q psy4398 147 GAALLSTPDIACNILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIG-VHGRTKAERPRH-RNRIEMIRTLT 224 (306)
Q Consensus 147 G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~-v~~~~~~~~~~~-p~~~~~v~~i~ 224 (306)
|+..+++.+++.+ +. .+++||.+|-....+.+++...++.+...|..-++ ++..+.. .|.. ..++..+..++
T Consensus 112 ga~~~~n~~ll~~----~a-~~~kPV~lk~G~~~t~~e~~~A~~~i~~~Gn~~i~L~~rg~~~-~~~~~~~dl~~i~~lk 185 (280)
T 2qkf_A 112 PAFLARQTDLVVA----MA-KTGNVVNIKKPQFLSPSQMKNIVEKFHEAGNGKLILCERGSSF-GYDNLVVDMLGFGVMK 185 (280)
T ss_dssp CGGGTTBHHHHHH----HH-HTCCEEEEECCTTSCGGGHHHHHHHHHHTTCCCEEEEECCEEC-STTCEECCTTHHHHHH
T ss_pred CcccccCHHHHHH----HH-cCCCcEEEECCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCC-CCCccccCHHHHHHHH
Confidence 4555566665444 42 46999999999766788899999999999985555 4543321 2211 14788889999
Q ss_pred hhC-CCcEEE
Q psy4398 225 QHL-KIPVIA 233 (306)
Q Consensus 225 ~~~-~ipvia 233 (306)
+.+ ++||+.
T Consensus 186 ~~~~~~pV~~ 195 (280)
T 2qkf_A 186 QTCGNLPVIF 195 (280)
T ss_dssp HHTTTCCEEE
T ss_pred HhCCCCCEEE
Confidence 998 899998
No 426
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=90.50 E-value=1.8 Score=39.02 Aligned_cols=85 Identities=15% Similarity=0.040 Sum_probs=63.0
Q ss_pred ChHHHHHHHHHHHhcccccEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEE
Q psy4398 153 TPDIACNILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVI 232 (306)
Q Consensus 153 ~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvi 232 (306)
.++.+.+.++.+++.++.|+.|.+-. ++ .+..+.++.+.+.|+|.|+++... | .++++.+++. +++|+
T Consensus 61 ~~~~l~~~i~~i~~~~~~p~gVnl~~-~~-~~~~~~~~~~~~~g~d~V~l~~g~-------p--~~~~~~l~~~-g~~v~ 128 (326)
T 3bo9_A 61 KPDDLRKAISELRQKTDKPFGVNIIL-VS-PWADDLVKVCIEEKVPVVTFGAGN-------P--TKYIRELKEN-GTKVI 128 (326)
T ss_dssp CHHHHHHHHHHHHTTCSSCEEEEEET-TS-TTHHHHHHHHHHTTCSEEEEESSC-------C--HHHHHHHHHT-TCEEE
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEEec-cC-CCHHHHHHHHHHCCCCEEEECCCC-------c--HHHHHHHHHc-CCcEE
Confidence 57888889999998878888888763 11 235677778888999999997642 2 3566777764 78877
Q ss_pred EecCCCCHHHHHHHHHhhh
Q psy4398 233 ANGGSKEIVDYGGVFSLNC 251 (306)
Q Consensus 233 a~GGI~s~~~~~~~l~~~v 251 (306)
. .+.+.++++.+.+.++
T Consensus 129 ~--~v~s~~~a~~a~~~Ga 145 (326)
T 3bo9_A 129 P--VVASDSLARMVERAGA 145 (326)
T ss_dssp E--EESSHHHHHHHHHTTC
T ss_pred E--EcCCHHHHHHHHHcCC
Confidence 5 5778999988887654
No 427
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=90.42 E-value=2.9 Score=35.68 Aligned_cols=131 Identities=14% Similarity=0.105 Sum_probs=76.1
Q ss_pred HHhc-CCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEeccCCChHHHHHHHHHHHHcCCcEE
Q psy4398 122 KVEH-DVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAI 200 (306)
Q Consensus 122 ~~~~-g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i 200 (306)
.+++ |+|.|-|+.+. |+..++ .+.+.++...+ .+.-..+=+. .. .+. +.+.+.+.+.|
T Consensus 80 ~l~~~Ga~~Vllghse-----RR~~~~--------e~~~k~~~A~~-~GL~~ivcVg--e~-~e~----~~~~~~~~~iI 138 (226)
T 1w0m_A 80 NIKEAGGSGVILNHSE-----APLKLN--------DLARLVAKAKS-LGLDVVVCAP--DP-RTS----LAAAALGPHAV 138 (226)
T ss_dssp HHHHHTCCEEEECCTT-----SCCBHH--------HHHHHHHHHHH-TTCEEEEEES--SH-HHH----HHHHHTCCSEE
T ss_pred HHHHcCCCEEEEeeee-----ccCCHH--------HHHHHHHHHHH-CCCEEEEEeC--CH-HHH----HHHhcCCCCEE
Confidence 4444 99999998665 222221 24444544443 3665666666 21 221 34466778877
Q ss_pred EEcccCCCCCCC--CCCc---HHHH-HHHHhhC-CCcEEEecCCCCHHHHHHHHHh---hhhhccccCCCCCchHH--HH
Q psy4398 201 GVHGRTKAERPR--HRNR---IEMI-RTLTQHL-KIPVIANGGSKEIVDYGGVFSL---NCAFLRNHYPVEKLPKT--IL 268 (306)
Q Consensus 201 ~v~~~~~~~~~~--~p~~---~~~v-~~i~~~~-~ipvia~GGI~s~~~~~~~l~~---~v~vGrall~~p~~~~~--~l 268 (306)
-+.++...+.-. .... .+.+ +.+++.. +++|++-|||++.++.+.+... |+-+|.+++.-+.+..+ +|
T Consensus 139 ayep~waiGtG~~v~t~~~d~~~~~~~~ir~~~~~~~ilyggsV~~~n~~~~~~~~giDG~LVG~a~l~a~~~~~~i~~l 218 (226)
T 1w0m_A 139 AVEPPELIGTGRAVSRYKPEAIVETVGLVSRHFPEVSVITGAGIESGDDVAAALRLGTRGVLLASAAVKAKDPYAKIVEL 218 (226)
T ss_dssp EECCGGGTTTSCCHHHHCHHHHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHTCSSHHHHHHHH
T ss_pred EEcChhhhccCCCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCcHHHHHHHHhCCCCEEEECHHHHCCcCHHHHHHHH
Confidence 777665433220 0112 2222 3334333 6899999999999999888776 55999999875544443 44
Q ss_pred HHHHH
Q psy4398 269 YAHCK 273 (306)
Q Consensus 269 ~~~~~ 273 (306)
...+.
T Consensus 219 ~~~~~ 223 (226)
T 1w0m_A 219 AKPLS 223 (226)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44443
No 428
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=90.36 E-value=1.5 Score=39.65 Aligned_cols=85 Identities=8% Similarity=0.073 Sum_probs=61.3
Q ss_pred ChHHHHHHHHHHHhcccccEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEE
Q psy4398 153 TPDIACNILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVI 232 (306)
Q Consensus 153 ~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvi 232 (306)
.++.+.+.++.+++.++.|+.|.+-.. + .+..+.++.+.+.|+|.|.++... | .++++.+++. ++||+
T Consensus 47 ~~~~~~~~i~~i~~~~~~p~gvnl~~~-~-~~~~~~~~~a~~~g~d~V~~~~g~-------p--~~~i~~l~~~-g~~v~ 114 (332)
T 2z6i_A 47 PKEVVKANIDKIKSLTDKPFGVNIMLL-S-PFVEDIVDLVIEEGVKVVTTGAGN-------P--SKYMERFHEA-GIIVI 114 (332)
T ss_dssp CHHHHHHHHHHHHHHCCSCEEEEECTT-S-TTHHHHHHHHHHTTCSEEEECSSC-------G--GGTHHHHHHT-TCEEE
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEecCC-C-CCHHHHHHHHHHCCCCEEEECCCC-------h--HHHHHHHHHc-CCeEE
Confidence 567778888888887778888877631 1 235677788888999999998742 1 2456677664 78887
Q ss_pred EecCCCCHHHHHHHHHhhh
Q psy4398 233 ANGGSKEIVDYGGVFSLNC 251 (306)
Q Consensus 233 a~GGI~s~~~~~~~l~~~v 251 (306)
.. +.+++.++.+.+.++
T Consensus 115 ~~--v~~~~~a~~~~~~Ga 131 (332)
T 2z6i_A 115 PV--VPSVALAKRMEKIGA 131 (332)
T ss_dssp EE--ESSHHHHHHHHHTTC
T ss_pred EE--eCCHHHHHHHHHcCC
Confidence 53 678888888777654
No 429
>3l9c_A 3-dehydroquinate dehydratase; AROD, amino-acid biosynthesis, aromatic amino acid biosynthe schiff base, lyase; 1.60A {Streptococcus mutans}
Probab=90.35 E-value=0.89 Score=39.80 Aligned_cols=87 Identities=14% Similarity=0.067 Sum_probs=56.2
Q ss_pred CceEEEecCCCHHHHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHh-cccccEEEEecc--
Q psy4398 102 NKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLIS-NLSIPVSCKIRV-- 178 (306)
Q Consensus 102 ~p~ivql~g~~~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~-~~~~pv~vKir~-- 178 (306)
..+++.|.+.+.++..++......|+|.||+ |-|-+. ...+.++.+.+++ ..+.|+.+=+|.
T Consensus 35 pkIcvpl~~~t~~e~~~~~~~~~~gaD~VEl---------RvD~l~------~~~~~~v~~~l~~~~~~~PiI~T~Rt~~ 99 (259)
T 3l9c_A 35 MKIVVPVMPQNIEEANQLDLTRIDSTDIIEW---------RADYLV------KDDILTVAPAIFEKFSGHEVIFTLRTEK 99 (259)
T ss_dssp CEEEEEECCSSHHHHHHCCCTTCCTTCEEEE---------EGGGSC------GGGHHHHHHHHHHHTTTSEEEEECCBGG
T ss_pred cEEEEEecCCCHHHHHHHHHhhccCCCEEEE---------Eecccc------chhHHHHHHHHHHhcCCCcEEEEEeehh
Confidence 3577889999998875322222349999999 334332 1223445555543 347899998886
Q ss_pred --C---CChHHHHHHHHHHHH-cCCcEEEEc
Q psy4398 179 --F---HNEADTIALCKRLEA-CGIIAIGVH 203 (306)
Q Consensus 179 --g---~~~~~~~~~a~~l~~-~G~d~i~v~ 203 (306)
| .+.++..++.+.+.+ .|+|+|.|-
T Consensus 100 EGG~~~~~~~~y~~ll~~~~~~~~~dyIDVE 130 (259)
T 3l9c_A 100 EGGNISLSNEDYLAIIRDIAALYQPDYIDFE 130 (259)
T ss_dssp GTCSBCCCHHHHHHHHHHHHHHHCCSEEEEE
T ss_pred hCCCCCCCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 2 234556777777665 799999984
No 430
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=90.31 E-value=2.9 Score=35.65 Aligned_cols=135 Identities=14% Similarity=0.047 Sum_probs=76.2
Q ss_pred CCceEEEecCCCHHHHHHHHHHHhc-CCCEEEEccCCCccccccCCccc---cccCChHHHHHHHHHHHhcccccEEEE-
Q psy4398 101 KNKIILQIGTADPERALEAAKKVEH-DVAAIDINMGCPKQFSLTGGMGA---ALLSTPDIACNILTTLISNLSIPVSCK- 175 (306)
Q Consensus 101 ~~p~ivql~g~~~~~~~~aa~~~~~-g~d~veln~gcP~~~~~~~~~G~---~l~~~~~~~~eiv~~v~~~~~~pv~vK- 175 (306)
+.++.+|........+.++.+.+++ |+++|||....|... .+.+ ....+++.+.++.+.+++ .++.+..=
T Consensus 9 ~mklg~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~-~gl~i~~~~ 83 (262)
T 3p6l_A 9 GWRLGMQSYSFHLFPLTEALDKTQELGLKYIEIYPGHKLGG----KWGDKVFDFNLDAQTQKEIKELAAS-KGIKIVGTG 83 (262)
T ss_dssp TEEEEEEGGGGTTSCHHHHHHHHHHTTCCEEEECTTEECCG----GGTTCEESTTCCHHHHHHHHHHHHH-TTCEEEEEE
T ss_pred CcEEEEEecccCCCCHHHHHHHHHHcCCCEEeecCCccccc----ccccccccccCCHHHHHHHHHHHHH-cCCeEEEEe
Confidence 4567888765444457777777765 999999976543210 1111 111245556666555544 35443322
Q ss_pred eccCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEec--C---CCCHHHHHHHHH
Q psy4398 176 IRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANG--G---SKEIVDYGGVFS 248 (306)
Q Consensus 176 ir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~G--G---I~s~~~~~~~l~ 248 (306)
.......+...+.++.+.+.|+..|+++.. ...|+.+.++.+..++.+..-. + ..+++++.++++
T Consensus 84 ~~~~~~~~~~~~~i~~A~~lGa~~v~~~~~--------~~~~~~l~~~a~~~gv~l~~En~~~~~~~~~~~~~~~ll~ 153 (262)
T 3p6l_A 84 VYVAEKSSDWEKMFKFAKAMDLEFITCEPA--------LSDWDLVEKLSKQYNIKISVHNHPQPSDYWKPENLLKAIS 153 (262)
T ss_dssp EECCSSTTHHHHHHHHHHHTTCSEEEECCC--------GGGHHHHHHHHHHHTCEEEEECCSSSSSSSSHHHHHHHHT
T ss_pred ccCCccHHHHHHHHHHHHHcCCCEEEecCC--------HHHHHHHHHHHHHhCCEEEEEeCCCccccCCHHHHHHHHH
Confidence 111234456788888889999999999742 2345555555555454433321 1 125566666554
No 431
>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel, lyase; HET: U5P; 2.40A {Bacillus subtilis} SCOP: c.1.2.3
Probab=90.29 E-value=1.3 Score=37.97 Aligned_cols=81 Identities=17% Similarity=0.185 Sum_probs=52.4
Q ss_pred ceEEEecCCCHHHHHHHHHHHhc-C--CCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhc-ccccEEEEecc
Q psy4398 103 KIILQIGTADPERALEAAKKVEH-D--VAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISN-LSIPVSCKIRV 178 (306)
Q Consensus 103 p~ivql~g~~~~~~~~aa~~~~~-g--~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~-~~~pv~vKir~ 178 (306)
++++.+--.+.+ ++.+.+++ + ++.+++|+.. | ..+=.++++.+++. ..+++++|+-
T Consensus 5 ~lilalD~~~l~---~~~~~~~~~~~~v~~~Kv~~d~---------~-------~~~G~~~v~~l~~~~~~v~lD~kl~- 64 (239)
T 1dbt_A 5 LPIIALDFASAE---ETLAFLAPFQQEPLFVKVGMEL---------F-------YQEGPSIVKQLKERNCELFLDLKLH- 64 (239)
T ss_dssp SCEEECCCSSHH---HHHHHTGGGTTSCCEEEECHHH---------H-------HHHTHHHHHHHHHTTCEEEEEEEEC-
T ss_pred CEEEEeCCCCHH---HHHHHHHHhcccCcEEEECHHH---------H-------HHhCHHHHHHHHHCCCcEEEEeccc-
Confidence 566666544544 44444543 3 6888887442 0 11223467777776 5788899987
Q ss_pred CCChHHHHHHHHHHHHcCCcEEEEcc
Q psy4398 179 FHNEADTIALCKRLEACGIIAIGVHG 204 (306)
Q Consensus 179 g~~~~~~~~~a~~l~~~G~d~i~v~~ 204 (306)
..+++....++.+.++|+|.+++|.
T Consensus 65 -Dip~t~~~~~~~~~~~Gad~vtvH~ 89 (239)
T 1dbt_A 65 -DIPTTVNKAMKRLASLGVDLVNVHA 89 (239)
T ss_dssp -SCHHHHHHHHHHHHTTTCSEEEEEG
T ss_pred -cchHHHHHHHHHHHhcCCCEEEEeC
Confidence 4445555678888899999999985
No 432
>1jpd_X L-Ala-D/L-Glu epimerase; enolase superfamily, muconate lactonizing enzyme subgroup, alpha/beta barrel, structural genomics, isomerase; 2.60A {Escherichia coli} SCOP: c.1.11.2 d.54.1.1
Probab=90.23 E-value=1.1 Score=40.43 Aligned_cols=114 Identities=7% Similarity=0.149 Sum_probs=71.8
Q ss_pred EecCCCHHHHHHHHHHH-hcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc-cccEEEEeccCCChHH
Q psy4398 107 QIGTADPERALEAAKKV-EHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL-SIPVSCKIRVFHNEAD 184 (306)
Q Consensus 107 ql~g~~~~~~~~aa~~~-~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~g~~~~~ 184 (306)
.+...+++++.+.++.+ ++||..+-+.+|. ..+ .+.++++|+.+ ++.+.+-...+|+.++
T Consensus 127 ~~~~~~~e~~~~~a~~~~~~G~~~~KiKvg~--------------~~d----~~~v~avr~~~~~~~l~vDaN~~~~~~~ 188 (324)
T 1jpd_X 127 TVVIGTPDQMANSASTLWQAGAKLLKVKLDN--------------HLI----SERMVAIRTAVPDATLIVDANESWRAEG 188 (324)
T ss_dssp EECSCCHHHHHHHHHHHHHTTCSEEEEECCS--------------SCH----HHHHHHHHHHCTTSEEEEECTTCCCSTT
T ss_pred EeeCCCHHHHHHHHHHHHHcCCCEEEEEeCC--------------chH----HHHHHHHHHhCCCCEEEEECcCCCCHHH
Confidence 34556888887766654 5699999997552 011 34567777766 3444454445688889
Q ss_pred HHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHH
Q psy4398 185 TIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFS 248 (306)
Q Consensus 185 ~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~ 248 (306)
+.++++.+++.++.+|- ++. .+.+++..++++ .++||.+-=.+.+..+++++++
T Consensus 189 a~~~~~~l~~~~i~~iE-------qP~-~~~d~~~~~~l~--~~ipIa~dE~~~~~~~~~~~~~ 242 (324)
T 1jpd_X 189 LAARCQLLADLGVAMLE-------QPL-PAQDDAALENFI--HPLPICADESCHTRSNLKALKG 242 (324)
T ss_dssp HHHHHHHHHHTTCCEEE-------CCS-CTTSCGGGGSSC--CSSCEEESTTCSSGGGHHHHBT
T ss_pred HHHHHHHHHhCCCCEEE-------CCC-CCCCHHHHHhcc--CCCCEEEcCCCCCHHHHHHHHh
Confidence 99999999999988774 111 112222223322 4677776666667777766654
No 433
>2p3z_A L-rhamnonate dehydratase; enolase, structural genomics, PSI, protein structure initiat YORK structural genomics research consortium; 1.80A {Salmonella typhimurium LT2} PDB: 3box_A 3cxo_A* 2gsh_A 3d47_A 3d46_A 2i5q_A
Probab=90.18 E-value=2.1 Score=39.96 Aligned_cols=117 Identities=9% Similarity=-0.012 Sum_probs=80.3
Q ss_pred hHHHHHHHHHHHhccc--ccEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCC--C
Q psy4398 154 PDIACNILTTLISNLS--IPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLK--I 229 (306)
Q Consensus 154 ~~~~~eiv~~v~~~~~--~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~--i 229 (306)
++.-.+.++++|++++ +.+.+-...+|+.+++.++++.+++.++..|- ++. .+.+++-.+++++.++ +
T Consensus 205 ~~~d~~~v~avrea~G~~~~L~vDaN~~~~~~~Ai~~~~~l~~~~i~~iE-------qPl-~~~d~~~~~~l~~~~~~~i 276 (415)
T 2p3z_A 205 IRKDAAMVADMREKCGPDFWLMLDCWMSQDVNYATKLAHACAPFNLKWIE-------ECL-PPQQYEGYRELKRNAPAGM 276 (415)
T ss_dssp HHHHHHHHHHHHHHHCSSSEEEEECTTCCCHHHHHHHHHHHGGGTCCEEE-------CCS-CTTCHHHHHHHHHHSCTTC
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHhhcCCceEe-------CCC-CcchHHHHHHHHHhcCCCC
Confidence 3445677788888763 45555555578999999999999999887763 222 2458899999999987 8
Q ss_pred cEEEecCCCCHHHHHHHHHhhhhhccccCCCC-Cc---h-HHHHHHHHHhcCCCCCc
Q psy4398 230 PVIANGGSKEIVDYGGVFSLNCAFLRNHYPVE-KL---P-KTILYAHCKYKRFEVPK 281 (306)
Q Consensus 230 pvia~GGI~s~~~~~~~l~~~v~vGrall~~p-~~---~-~~~l~~~~~~~g~~~~~ 281 (306)
||.+-=.+.+..+++++++.+ ...+.-++ .+ . -+.+.+..+++|++...
T Consensus 277 pIa~dE~~~~~~~~~~~i~~~---~d~i~ik~~~~GGitea~~ia~lA~~~gi~v~~ 330 (415)
T 2p3z_A 277 MVTSGEHHGTLQSFRTLAETG---IDIMQPDVGWCGGLTTLVEIAALAKSRGQLVVP 330 (415)
T ss_dssp EEEECTTCCSHHHHHHHHHTT---CSEECCCHHHHTCHHHHHHHHHHHHHTTCCBCC
T ss_pred cEEcCCCCCCHHHHHHHHHcC---CCEEEeCccccCCHHHHHHHHHHHHHcCCEEEe
Confidence 877766678888888887753 11222222 11 1 12667778888888544
No 434
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=90.13 E-value=0.73 Score=41.54 Aligned_cols=62 Identities=13% Similarity=0.133 Sum_probs=37.7
Q ss_pred CHHHHHHHHH-HHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEec
Q psy4398 112 DPERALEAAK-KVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIR 177 (306)
Q Consensus 112 ~~~~~~~aa~-~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir 177 (306)
+++...+.|+ .+++|+|.|+|+.-+..+.. -.-+..+..+.+..+|+++++..++||++-..
T Consensus 31 ~~~~a~~~a~~~v~~GAdIIDIGgeSTrPGa----~~v~~~eE~~Rv~pvI~~l~~~~~vpiSIDT~ 93 (314)
T 2vef_A 31 ALEQALQQARKLIAEGASMLDIGGESTRPGS----SYVEIEEEIQRVVPVIKAIRKESDVLISIDTW 93 (314)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCC---------CHHHHHHHHHHHHHHHHHHHHHCCCEEEEECS
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCcCCCCC----CCCCHHHHHHHHHHHHHHHHhhCCceEEEeCC
Confidence 3444444444 44569999999975422100 00112345567788888898877889888755
No 435
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=89.92 E-value=1.7 Score=38.92 Aligned_cols=53 Identities=25% Similarity=0.306 Sum_probs=31.4
Q ss_pred HHHHHHHHH-HHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHH---hcccccEEEEec
Q psy4398 113 PERALEAAK-KVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLI---SNLSIPVSCKIR 177 (306)
Q Consensus 113 ~~~~~~aa~-~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~---~~~~~pv~vKir 177 (306)
.+...+.|+ .+++|+|.|+||++.+. ....+.+.+++..++ +..++|+++-.+
T Consensus 36 ~~~a~~~A~~~v~~GAdiIDIg~g~~~------------v~~~eem~rvv~~i~~~~~~~~vpisIDT~ 92 (300)
T 3k13_A 36 YDEALSIARQQVEDGALVIDVNMDDGL------------LDARTEMTTFLNLIMSEPEIARVPVMIDSS 92 (300)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCCTT------------SCHHHHHHHHHHHHHTCHHHHTSCEEEECS
T ss_pred HHHHHHHHHHHHHCCCCEEEECCCCCC------------CCHHHHHHHHHHHHHHhhhcCCCeEEEeCC
Confidence 344444455 34569999999986432 122334444444443 556889888755
No 436
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=89.90 E-value=1.1 Score=40.10 Aligned_cols=86 Identities=12% Similarity=0.121 Sum_probs=55.0
Q ss_pred HHHHHHHHhcc-cccEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhC--CCcEEEe
Q psy4398 158 CNILTTLISNL-SIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHL--KIPVIAN 234 (306)
Q Consensus 158 ~eiv~~v~~~~-~~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~--~ipvia~ 234 (306)
.+.++++++.. ..++.|-+. +.+ -++.+.++|+|.|-++.. +.+.++++.+.+ ++++.++
T Consensus 197 ~~Av~~~r~~~p~~~ieVEvd---tld----e~~eAl~aGaD~I~LDn~----------~~~~l~~av~~i~~~v~ieaS 259 (298)
T 3gnn_A 197 GEALDAAFALNAEVPVQIEVE---TLD----QLRTALAHGARSVLLDNF----------TLDMMRDAVRVTEGRAVLEVS 259 (298)
T ss_dssp HHHHHHHHHHC--CCCEEEES---SHH----HHHHHHHTTCEEEEEESC----------CHHHHHHHHHHHTTSEEEEEE
T ss_pred HHHHHHHHHhCCCCCEEEEeC---CHH----HHHHHHHcCCCEEEECCC----------CHHHHHHHHHHhCCCCeEEEE
Confidence 45566666654 345555554 333 345555689999999753 234555444433 6899999
Q ss_pred cCCCCHHHHHHHHHhhh---hhccccCCCC
Q psy4398 235 GGSKEIVDYGGVFSLNC---AFLRNHYPVE 261 (306)
Q Consensus 235 GGI~s~~~~~~~l~~~v---~vGrall~~p 261 (306)
|||+ .+++.++.+.|+ .+|+..+.-|
T Consensus 260 GGI~-~~~i~~~a~tGVD~isvG~lt~sa~ 288 (298)
T 3gnn_A 260 GGVN-FDTVRAIAETGVDRISIGALTKDVR 288 (298)
T ss_dssp SSCS-TTTHHHHHHTTCSEEECGGGGTSCC
T ss_pred cCCC-HHHHHHHHHcCCCEEEECCeecCCC
Confidence 9985 788888888766 7777655433
No 437
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=89.90 E-value=6 Score=33.56 Aligned_cols=92 Identities=12% Similarity=-0.079 Sum_probs=54.1
Q ss_pred CCceEEEecCCCHHHHHHHHHHHhc-CCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEec-c
Q psy4398 101 KNKIILQIGTADPERALEAAKKVEH-DVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIR-V 178 (306)
Q Consensus 101 ~~p~ivql~g~~~~~~~~aa~~~~~-g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir-~ 178 (306)
..++.+|........+.++.+.+++ ||++||+.... + .....++.+.++.+.+++ .++.+..=-. .
T Consensus 17 ~~klg~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~---------~--~~~~~~~~~~~~~~~l~~-~gl~i~~~~~~~ 84 (257)
T 3lmz_A 17 PFHLGMAGYTFVNFDLDTTLKTLERLDIHYLCIKDFH---------L--PLNSTDEQIRAFHDKCAA-HKVTGYAVGPIY 84 (257)
T ss_dssp SSEEEECGGGGTTSCHHHHHHHHHHTTCCEEEECTTT---------S--CTTCCHHHHHHHHHHHHH-TTCEEEEEEEEE
T ss_pred ceEEEEEEEeecCCCHHHHHHHHHHhCCCEEEEeccc---------C--CCCCCHHHHHHHHHHHHH-cCCeEEEEeccc
Confidence 4577887665444466777777765 99999997541 0 001234555555555544 3444332111 0
Q ss_pred CCChHHHHHHHHHHHHcCCcEEEEcc
Q psy4398 179 FHNEADTIALCKRLEACGIIAIGVHG 204 (306)
Q Consensus 179 g~~~~~~~~~a~~l~~~G~d~i~v~~ 204 (306)
....+...+.++.+.+.|+..|+++.
T Consensus 85 ~~~~~~~~~~i~~A~~lGa~~v~~~p 110 (257)
T 3lmz_A 85 MKSEEEIDRAFDYAKRVGVKLIVGVP 110 (257)
T ss_dssp ECSHHHHHHHHHHHHHHTCSEEEEEE
T ss_pred cCCHHHHHHHHHHHHHhCCCEEEecC
Confidence 12445677777888888888888763
No 438
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=89.88 E-value=8.9 Score=34.94 Aligned_cols=168 Identities=14% Similarity=0.249 Sum_probs=100.9
Q ss_pred ccccccccc--CCceEEccCCCC--CCHH--HHHH--HHHcCCCEEEecceechhhhhhhhhhhcccccccccCCCCCce
Q psy4398 21 NANQANINY--SNKIILAPMVRM--NTLP--FRLL--ALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDGSV 92 (306)
Q Consensus 21 ~~~~~~l~l--~n~i~lAPm~~~--t~~~--~r~~--~~~~G~g~~~te~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 92 (306)
++.+|++.+ .+|+..=+|+.. .|.. ..+. ..+.||.++=..+-..+. ....+.
T Consensus 18 ~v~VG~v~IGG~~Pi~VQSMtnt~T~D~~atv~Qi~~l~~aG~diVRvavp~~~~-a~al~~------------------ 78 (366)
T 3noy_A 18 QIRVGNVKIGGDAPIVVQSMTSTKTHDVEATLNQIKRLYEAGCEIVRVAVPHKED-VEALEE------------------ 78 (366)
T ss_dssp CEEETTEEESTTSCCEEEEECCSCTTCHHHHHHHHHHHHHTTCCEEEEECCSHHH-HHHHHH------------------
T ss_pred EEEECCEEEcCCCcEEEEEecCCCCcCHHHHHHHHHHHHHcCCCEEEeCCCChHH-HHHHHH------------------
Confidence 355666654 789999999932 2222 2222 247899887543322111 111110
Q ss_pred eeecCCCCCCceEEEecCCCHHHHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccE
Q psy4398 93 VFRTCPREKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPV 172 (306)
Q Consensus 93 ~~~~~~~~~~p~ivql~g~~~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv 172 (306)
+.+ ....|+++-+ +.++.... ..++.|+|.+-||=| ++| +.+.+.+++++.++. ++|+
T Consensus 79 I~~---~~~vPlvaDi-Hf~~~lal---~a~e~G~dklRINPG---------Nig-----~~~~~~~vv~~ak~~-~~pi 136 (366)
T 3noy_A 79 IVK---KSPMPVIADI-HFAPSYAF---LSMEKGVHGIRINPG---------NIG-----KEEIVREIVEEAKRR-GVAV 136 (366)
T ss_dssp HHH---HCSSCEEEEC-CSCHHHHH---HHHHTTCSEEEECHH---------HHS-----CHHHHHHHHHHHHHH-TCEE
T ss_pred HHh---cCCCCEEEeC-CCCHHHHH---HHHHhCCCeEEECCc---------ccC-----chhHHHHHHHHHHHc-CCCE
Confidence 001 1246899887 55553222 334569999999833 233 356778899888775 7787
Q ss_pred EEEeccC------------CCh----HHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEE
Q psy4398 173 SCKIRVF------------HNE----ADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIA 233 (306)
Q Consensus 173 ~vKir~g------------~~~----~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia 233 (306)
-+.+.-| +++ +++.+.++.+++.|.+-|.++....+ -+..++..+.+++..+.|+..
T Consensus 137 RIGvN~GSL~~~ll~~yg~~~~eamVeSAl~~~~~~e~~gf~~iviS~K~S~----v~~~i~ayr~la~~~dyPLHl 209 (366)
T 3noy_A 137 RIGVNSGSLEKDLLEKYGYPSAEALAESALRWSEKFEKWGFTNYKVSIKGSD----VLQNVRANLIFAERTDVPLHI 209 (366)
T ss_dssp EEEEEGGGCCHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECSS----HHHHHHHHHHHHHHCCCCEEE
T ss_pred EEecCCcCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHhCCCCeEEEeeecCC----hHHHHHHHHHHHhccCCCEEE
Confidence 7765442 232 34678899999999999988754321 011345557788888999753
No 439
>4aaj_A N-(5'-phosphoribosyl)anthranilate isomerase; alpha/beta-barrel, hyperthermophilic, phosphoribo isomerase; 1.75A {Pyrococcus furiosus}
Probab=89.85 E-value=2.7 Score=35.98 Aligned_cols=102 Identities=21% Similarity=0.223 Sum_probs=64.1
Q ss_pred CCceEEEecCCC-HHHHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccE-EEEecc
Q psy4398 101 KNKIILQIGTAD-PERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPV-SCKIRV 178 (306)
Q Consensus 101 ~~p~ivql~g~~-~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv-~vKir~ 178 (306)
+.+..|-|+|-+ +++ ++ .++.|+|.+-+.+.-+++.. =.++.+.++++. ...|+ .|.+-
T Consensus 18 ~~~M~VKICGit~~ed-~~---a~~~gaD~iGfIf~~~SpR~----------V~~~~A~~i~~~----~~~~~~~v~v~- 78 (228)
T 4aaj_A 18 GSHMFVKICGIKSLEE-LE---IVEKHADATGVVVNSNSKRR----------IPLEKAREIIEN----SAIPVFLVSTM- 78 (228)
T ss_dssp --CCEEEECCCCSHHH-HH---HHHTTCSEEEEECSSSSTTB----------CCHHHHHHHHHH----CSSCEEEEECC-
T ss_pred CCceEEEECCCCcHHH-HH---HHHcCCCEEEEEecCCCCCC----------CCHHHHHHHHHh----hCCCCEEEecc-
Confidence 456889999965 444 23 34569999999875433311 146666666543 22332 23332
Q ss_pred CCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEe
Q psy4398 179 FHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIAN 234 (306)
Q Consensus 179 g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~ 234 (306)
.+.+ ++++.+++.+.|.|.+||.. ..+.+.++++.+++|||=+
T Consensus 79 -v~~~---ei~~~i~~~~ld~vQLHG~E---------~~~~~~~l~~~~~~~viKa 121 (228)
T 4aaj_A 79 -VGFS---EWAMAIERTGAQYIQVHSNA---------LPQTIDTLKKEFGVFVMKA 121 (228)
T ss_dssp -CCHH---HHHHHHHHHTCSEEEECSCC---------CHHHHHHHHHHHCCEEEEE
T ss_pred -CchH---HHHHHHHhccchheeccccc---------CHHHHHHHhhccCceEEEE
Confidence 3433 56667788999999999752 3478888888888887644
No 440
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=89.75 E-value=1.6 Score=39.00 Aligned_cols=83 Identities=13% Similarity=0.058 Sum_probs=54.7
Q ss_pred HHHHHHHHhcc-cccEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhC--CCcEEEe
Q psy4398 158 CNILTTLISNL-SIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHL--KIPVIAN 234 (306)
Q Consensus 158 ~eiv~~v~~~~-~~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~--~ipvia~ 234 (306)
.+.++++|+.. ..++.|-+. + .+-++.+.++|+|.|-+...+ .+.++++.+.+ ++.+.++
T Consensus 195 ~~Av~~ar~~~p~~kIeVEv~---t----l~e~~eAl~aGaDiImLDn~s----------~~~l~~av~~~~~~v~leaS 257 (300)
T 3l0g_A 195 TLAIQRLRKNLKNEYIAIECD---N----ISQVEESLSNNVDMILLDNMS----------ISEIKKAVDIVNGKSVLEVS 257 (300)
T ss_dssp HHHHHHHHHHSSSCCEEEEES---S----HHHHHHHHHTTCSEEEEESCC----------HHHHHHHHHHHTTSSEEEEE
T ss_pred HHHHHHHHHhCCCCCEEEEEC---C----HHHHHHHHHcCCCEEEECCCC----------HHHHHHHHHhhcCceEEEEE
Confidence 46666776654 456666555 2 344455556899999987532 24555444444 6899999
Q ss_pred cCCCCHHHHHHHHHhhh---hhccccC
Q psy4398 235 GGSKEIVDYGGVFSLNC---AFLRNHY 258 (306)
Q Consensus 235 GGI~s~~~~~~~l~~~v---~vGrall 258 (306)
|||+ ++++.++.+.|+ .+|....
T Consensus 258 GGIt-~~~i~~~A~tGVD~IsvGalth 283 (300)
T 3l0g_A 258 GCVN-IRNVRNIALTGVDYISIGCITN 283 (300)
T ss_dssp SSCC-TTTHHHHHTTTCSEEECGGGTS
T ss_pred CCCC-HHHHHHHHHcCCCEEEeCcccc
Confidence 9985 788888888776 6665443
No 441
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=89.64 E-value=1.4 Score=36.58 Aligned_cols=74 Identities=9% Similarity=0.080 Sum_probs=56.0
Q ss_pred ccEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCC-CcEEEecCCCCHHHHHHHHH
Q psy4398 170 IPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLK-IPVIANGGSKEIVDYGGVFS 248 (306)
Q Consensus 170 ~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~-ipvia~GGI~s~~~~~~~l~ 248 (306)
.|+.+=++. .+.++..++++.+.+.|++.|.++-++ +...+.++++++.++ -.+|+.|-+.++++++.+++
T Consensus 10 ~~~i~~~~~-~~~~~~~~~~~~~~~~G~~~iev~~~~-------~~~~~~i~~ir~~~~~~~~ig~~~v~~~~~~~~a~~ 81 (205)
T 1wa3_A 10 HKIVAVLRA-NSVEEAKEKALAVFEGGVHLIEITFTV-------PDADTVIKELSFLKEKGAIIGAGTVTSVEQCRKAVE 81 (205)
T ss_dssp HCEEEEECC-SSHHHHHHHHHHHHHTTCCEEEEETTS-------TTHHHHHHHTHHHHHTTCEEEEESCCSHHHHHHHHH
T ss_pred CCEEEEEec-CCHHHHHHHHHHHHHCCCCEEEEeCCC-------hhHHHHHHHHHHHCCCCcEEEecccCCHHHHHHHHH
Confidence 466666663 467889999999999999999998653 223566888888763 23567777889999998888
Q ss_pred hhh
Q psy4398 249 LNC 251 (306)
Q Consensus 249 ~~v 251 (306)
.++
T Consensus 82 ~Ga 84 (205)
T 1wa3_A 82 SGA 84 (205)
T ss_dssp HTC
T ss_pred cCC
Confidence 765
No 442
>2egz_A 3-dehydroquinate dehydratase; aquifex aeolicus VF5, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: TLA; 1.75A {Aquifex aeolicus} PDB: 2ysw_A
Probab=89.61 E-value=3 Score=35.32 Aligned_cols=84 Identities=12% Similarity=0.126 Sum_probs=59.4
Q ss_pred eEEEecCCCHHHHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEecc----C
Q psy4398 104 IILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRV----F 179 (306)
Q Consensus 104 ~ivql~g~~~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~----g 179 (306)
+++.|.+.+.++..+.++.. |+|.||+ |-|.+.. ...+.+.+++..+|+. +.|+.+=+|. |
T Consensus 3 icv~l~~~~~~~~~~~~~~~--~~D~vEl---------RvD~l~~---~~~~~v~~~~~~lr~~-~~PiI~T~R~~~eGG 67 (219)
T 2egz_A 3 IAVPLDDTNFSENLKKAKEK--GADIVEL---------RVDQFSD---TSLNYVKEKLEEVHSQ-GLKTILTIRSPEEGG 67 (219)
T ss_dssp EEEEECSTTHHHHHHHHHHH--TCSEEEE---------EGGGCSC---CCHHHHHHHHHHHHHT-TCEEEEECCCGGGTC
T ss_pred EEEEeCCCCHHHHHHHHHHc--CCCEEEE---------Eeccccc---cCHHHHHHHHHHHHhc-CCcEEEEEeehhccC
Confidence 67788888888865544432 8999999 3333311 1246678888888886 7999998886 2
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEc
Q psy4398 180 HNEADTIALCKRLEACGIIAIGVH 203 (306)
Q Consensus 180 ~~~~~~~~~a~~l~~~G~d~i~v~ 203 (306)
.+.++..++.+.+.+. +|+|.|.
T Consensus 68 ~~~~~~~~ll~~~~~~-~d~iDvE 90 (219)
T 2egz_A 68 REVKNREELFEELSPL-SDYTDIE 90 (219)
T ss_dssp CCCTTHHHHHHHHTTT-SSEEEEE
T ss_pred CCHHHHHHHHHHHHhc-CCEEEEE
Confidence 2345577777777777 9999985
No 443
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=89.58 E-value=8.6 Score=32.93 Aligned_cols=131 Identities=14% Similarity=0.108 Sum_probs=72.3
Q ss_pred CceEEEec-CCCHHHHHHHHHHHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccc--c-EE-EE
Q psy4398 102 NKIILQIG-TADPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSI--P-VS-CK 175 (306)
Q Consensus 102 ~p~ivql~-g~~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~--p-v~-vK 175 (306)
.++++-+. +..|+....+++.+. .|+|.|.+|.... .+.+..+++.+++. +. | +. |.
T Consensus 66 ~~v~lD~kl~Dip~t~~~~i~~~~~~Gad~vTvH~~~g----------------~~~l~~~~~~~~~~-G~~~~~~l~v~ 128 (245)
T 1eix_A 66 FDIFLDLKFHDIPNTAAHAVAAAADLGVWMVNVHASGG----------------ARMMTAAREALVPF-GKDAPLLIAVT 128 (245)
T ss_dssp CCEEEEEEECSCHHHHHHHHHHHHHHTCSEEEEBGGGC----------------HHHHHHHHHTTGGG-GGGCCEEEEEC
T ss_pred CcEEEEeeccccHHHHHHHHHHHHhCCCCEEEEeccCC----------------HHHHHHHHHHHHHc-CCCCCcEEEEE
Confidence 34555543 345555444555454 5999999985421 12344555555442 32 3 21 22
Q ss_pred eccCCC------------hHH-HHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhC-CCcEEEecCCCCHH
Q psy4398 176 IRVFHN------------EAD-TIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHL-KIPVIANGGSKEIV 241 (306)
Q Consensus 176 ir~g~~------------~~~-~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~-~ipvia~GGI~s~~ 241 (306)
.....+ ..+ ...++....+.|.++++.+. ++ ++++++.. +.+++..|||+.--
T Consensus 129 ~~ts~~~~~l~~~~~~~~~~d~Vl~ma~~~~~~G~~g~V~~~------------~e-i~~lr~~~~~~~i~v~gGI~~~g 195 (245)
T 1eix_A 129 VLTSMEASDLVDLGMTLSPADYAERLAALTQKCGLDGVVCSA------------QE-AVRFKQVFGQEFKLVTPGIRPQG 195 (245)
T ss_dssp SCTTCCHHHHHTTTCCSCHHHHHHHHHHHHHHTTCSEEECCG------------GG-HHHHHHHHCSSSEEEECCBCCTT
T ss_pred ecCCCCHHHHHHhccCCCHHHHHHHHHHHHHHcCCCeEEeCH------------HH-HHHHHHhcCCCCEEEECCcCCCC
Confidence 211111 111 22333334567888875432 24 56666665 46899999998320
Q ss_pred ----------HHHHHHHhh---hhhccccCCCCC
Q psy4398 242 ----------DYGGVFSLN---CAFLRNHYPVEK 262 (306)
Q Consensus 242 ----------~~~~~l~~~---v~vGrall~~p~ 262 (306)
+..++++.| +.+||+++..+.
T Consensus 196 ~~~~dq~rv~t~~~a~~aGad~iVvGr~I~~a~d 229 (245)
T 1eix_A 196 SEAGDQRRIMTPEQALSAGVDYMVIGRPVTQSVD 229 (245)
T ss_dssp CCCTTCCSCBCHHHHHHTTCSEEEECHHHHTSSS
T ss_pred CCccchhccCCHHHHHHcCCCEEEECHHHcCCCC
Confidence 466666665 499999997543
No 444
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=89.56 E-value=2.3 Score=38.58 Aligned_cols=82 Identities=17% Similarity=0.206 Sum_probs=56.5
Q ss_pred cccccEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCC---CCC---cHHHHHHHHhhCCCcEEEe--cCCC
Q psy4398 167 NLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPR---HRN---RIEMIRTLTQHLKIPVIAN--GGSK 238 (306)
Q Consensus 167 ~~~~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~---~p~---~~~~v~~i~~~~~ipvia~--GGI~ 238 (306)
..+.|+.+.+..+.+.+. +.+.++++|+|+|.++......... .+. .++.++++++.+++||+.- |...
T Consensus 114 ~~~~pv~~~i~~~~~~~~---~~~~~~~~gad~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~vr~~~~~Pv~vK~~~~~~ 190 (349)
T 1p0k_A 114 NPNGLIFANLGSEATAAQ---AKEAVEMIGANALQIHLNVIQEIVMPEGDRSFSGALKRIEQICSRVSVPVIVKEVGFGM 190 (349)
T ss_dssp CSSSCEEEEEETTCCHHH---HHHHHHHTTCSEEEEEECTTTTC--------CTTHHHHHHHHHHHCSSCEEEEEESSCC
T ss_pred CCCceeEEeecCCCCHHH---HHHHHHhcCCCeEEecccchhhhcCCCCCcchHHHHHHHHHHHHHcCCCEEEEecCCCC
Confidence 457899988875555443 4466778999999887543221111 111 3578999999999999985 4557
Q ss_pred CHHHHHHHHHhhh
Q psy4398 239 EIVDYGGVFSLNC 251 (306)
Q Consensus 239 s~~~~~~~l~~~v 251 (306)
+.++++.+.+.|+
T Consensus 191 ~~~~a~~a~~~Ga 203 (349)
T 1p0k_A 191 SKASAGKLYEAGA 203 (349)
T ss_dssp CHHHHHHHHHHTC
T ss_pred CHHHHHHHHHcCC
Confidence 8999998888765
No 445
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=89.55 E-value=7.5 Score=33.82 Aligned_cols=160 Identities=11% Similarity=0.031 Sum_probs=0.0
Q ss_pred CCceEEEe-cCCCHHHHHHHHHHHhc-CCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHh----cccccEEE
Q psy4398 101 KNKIILQI-GTADPERALEAAKKVEH-DVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLIS----NLSIPVSC 174 (306)
Q Consensus 101 ~~p~ivql-~g~~~~~~~~aa~~~~~-g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~----~~~~pv~v 174 (306)
+.++++-+ .+.-++....+++.+.. |+|.+.+|... -.+.+...++..++ ....|..+
T Consensus 56 g~~VflDlK~~DIpnTv~~a~~~~~~~gad~vTVh~~~----------------G~~~~~aa~~~~~~~~~~g~~~~~li 119 (259)
T 3tfx_A 56 GYKIFLDLKMHDIPNTVYNGAKALAKLGITFTTVHALG----------------GSQMIKSAKDGLIAGTPAGHSVPKLL 119 (259)
T ss_dssp TCEEEEEEEECSCHHHHHHHHHHHHTTTCSEEEEEGGG----------------CHHHHHHHHHHHHHHSCTTSCCCEEE
T ss_pred CCcEEEEecccccchHHHHHHHHHHhcCCCEEEEcCCC----------------CHHHHHHHHHHHHHhcccCCCCceEE
Q ss_pred Eecc--CCChHHH--------------HHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhC-CCcEEEecCC
Q psy4398 175 KIRV--FHNEADT--------------IALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHL-KIPVIANGGS 237 (306)
Q Consensus 175 Kir~--g~~~~~~--------------~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~-~ipvia~GGI 237 (306)
-+.. .++.+++ .++|+...++|+|++++++ .-+..+++.+ +-.++.+.||
T Consensus 120 ~Vt~lTS~~~~~l~~~~g~~~~~~e~v~~~A~~a~~~G~dGvV~s~-------------~e~~~ir~~~~~~f~~vtPGI 186 (259)
T 3tfx_A 120 AVTELTSISDDVLRNEQNCRLPMAEQVLSLAKMAKHSGADGVICSP-------------LEVKKLHENIGDDFLYVTPGI 186 (259)
T ss_dssp EECSCTTCCHHHHHHTSCBSSCHHHHHHHHHHHHHHTTCCEEECCG-------------GGHHHHHHHHCSSSEEEECCC
T ss_pred EEEEeCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCEEEECH-------------HHHHHHHhhcCCccEEEcCCc
Q ss_pred CCHH----------HHHHHHHhhh---hhccccCC--CC-CchHHHHHHHHHhcCCCCCcceehhhcc
Q psy4398 238 KEIV----------DYGGVFSLNC---AFLRNHYP--VE-KLPKTILYAHCKYKRFEVPKYETVQYEK 289 (306)
Q Consensus 238 ~s~~----------~~~~~l~~~v---~vGrall~--~p-~~~~~~l~~~~~~~g~~~~~~~~~~~~~ 289 (306)
+-.- +..++++.|+ .+||+++. || ...+.-.++|-+...|--+-+|..-.+|
T Consensus 187 r~~g~~~gDQ~Rv~T~~~a~~aGad~iVvGr~I~~a~dp~~a~~~i~~~~~~~~~~~~~~~~~~~~~~ 254 (259)
T 3tfx_A 187 RPAGNAKDDQSRVATPKMAKEWGSSAIVVGRPITLASDPKAAYEAIKKEFNAENLYFQSHHHHHHWSH 254 (259)
T ss_dssp CCC-----------CHHHHHHTTCSEEEECHHHHTSSSHHHHHHHHHHHHTCTTCSCCC---------
T ss_pred CCCCCCcCCccccCCHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHHHHHHHHHHHHhhccccccccc
No 446
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=89.48 E-value=4.5 Score=35.60 Aligned_cols=116 Identities=17% Similarity=0.233 Sum_probs=71.1
Q ss_pred HHHHh-cCCCEEEEc-cCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEeccCC--ChHHHHHHHHHHHHc
Q psy4398 120 AKKVE-HDVAAIDIN-MGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFH--NEADTIALCKRLEAC 195 (306)
Q Consensus 120 a~~~~-~g~d~veln-~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~--~~~~~~~~a~~l~~~ 195 (306)
|+.++ .|||+|=+- .+.-. .-++-....-..+.....+++|...++.||.+-+-.|. +.++..+.++.+.++
T Consensus 29 A~~~~~aG~~ai~vsg~s~a~----~~G~pD~~~vt~~em~~~~~~I~~~~~~pviaD~d~Gyg~~~~~~~~~v~~l~~a 104 (275)
T 2ze3_A 29 ARLLEAAGFTAIGTTSAGIAH----ARGRTDGQTLTRDEMGREVEAIVRAVAIPVNADIEAGYGHAPEDVRRTVEHFAAL 104 (275)
T ss_dssp HHHHHHHTCSCEEECHHHHHH----HSCCCSSSSSCHHHHHHHHHHHHHHCSSCEEEECTTCSSSSHHHHHHHHHHHHHT
T ss_pred HHHHHHcCCCEEEECcHHHHH----hCCCCCCCCCCHHHHHHHHHHHHhhcCCCEEeecCCCCCCCHHHHHHHHHHHHHc
Confidence 44454 499998774 11100 01111111234566677778888888899999999874 467789999999999
Q ss_pred CCcEEEEcccCC-CCCCCCCC--cHHHHHHHHhhC---CCcEEEecCCCC
Q psy4398 196 GIIAIGVHGRTK-AERPRHRN--RIEMIRTLTQHL---KIPVIANGGSKE 239 (306)
Q Consensus 196 G~d~i~v~~~~~-~~~~~~p~--~~~~v~~i~~~~---~ipvia~GGI~s 239 (306)
|+++|++-+... .++..-|. ..+.++.++++- ++|+..+|....
T Consensus 105 Gaagv~iED~~~~~~k~l~~~~e~~~~I~aa~~a~~~~g~~~~i~aRtda 154 (275)
T 2ze3_A 105 GVAGVNLEDATGLTPTELYDLDSQLRRIEAARAAIDASGVPVFLNARTDT 154 (275)
T ss_dssp TCSEEEEECBCSSSSSCBCCHHHHHHHHHHHHHHHHHHTSCCEEEEECCT
T ss_pred CCcEEEECCCcCCCCCccCCHHHHHHHHHHHHHhHhhcCCCeEEEEechh
Confidence 999999976542 11211121 233444444442 577777776443
No 447
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=89.39 E-value=7.5 Score=33.62 Aligned_cols=149 Identities=13% Similarity=0.071 Sum_probs=96.9
Q ss_pred CCCHHHHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEeccCCCh-------
Q psy4398 110 TADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFHNE------- 182 (306)
Q Consensus 110 g~~~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~------- 182 (306)
|-++..+.+..+.+.+..|++-+ ++|++.....+.+.+.++.+++. ++++. .|.+.
T Consensus 22 glg~~~~~d~Le~~g~yID~lKf------------g~Gt~~l~~~~~l~eki~l~~~~-gV~v~----~GGTl~E~~~~q 84 (251)
T 1qwg_A 22 GLPPKFVEDYLKVCGDYIDFVKF------------GWGTSAVIDRDVVKEKINYYKDW-GIKVY----PGGTLFEYAYSK 84 (251)
T ss_dssp SCCHHHHHHHHHHHGGGCSEEEE------------CTTGGGGSCHHHHHHHHHHHHTT-TCEEE----ECHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHhhhhcceEEe------------cCceeeecCHHHHHHHHHHHHHc-CCeEE----CCcHHHHHHHHc
Confidence 56788888888877788999988 57778888889999999998775 44433 32211
Q ss_pred HHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCH--------HHHHH----HHHhh
Q psy4398 183 ADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEI--------VDYGG----VFSLN 250 (306)
Q Consensus 183 ~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~--------~~~~~----~l~~~ 250 (306)
....+..+.+.+.|.+.|-++..+.+-.. ....++++.+++. +.-++.-=|..++ +.+-+ -+++|
T Consensus 85 g~~~~yl~~~k~lGf~~iEiS~G~i~l~~--~~~~~~I~~~~~~-G~~v~~EvG~k~~~~~~~~~~~~~I~~~~~~LeAG 161 (251)
T 1qwg_A 85 GKFDEFLNECEKLGFEAVEISDGSSDISL--EERNNAIKRAKDN-GFMVLTEVGKKMPDKDKQLTIDDRIKLINFDLDAG 161 (251)
T ss_dssp TCHHHHHHHHHHHTCCEEEECCSSSCCCH--HHHHHHHHHHHHT-TCEEEEEECCSSHHHHTTCCHHHHHHHHHHHHHHT
T ss_pred CcHHHHHHHHHHcCCCEEEECCCcccCCH--HHHHHHHHHHHHC-CCEEeeeccccCCcccCCCCHHHHHHHHHHHHHCC
Confidence 13678888899999999999987654221 1124566666655 3444444344444 44333 33344
Q ss_pred h--------hhcc--ccCCCC-CchHHHHHHHHHhcCCC
Q psy4398 251 C--------AFLR--NHYPVE-KLPKTILYAHCKYKRFE 278 (306)
Q Consensus 251 v--------~vGr--all~~p-~~~~~~l~~~~~~~g~~ 278 (306)
+ ..|+ .++.+- .+....++..+++-+.+
T Consensus 162 A~~ViiEarEsG~~iGi~~~~g~~r~d~v~~i~~~l~~e 200 (251)
T 1qwg_A 162 ADYVIIEGRESGKGKGLFDKEGKVKENELDVLAKNVDIN 200 (251)
T ss_dssp CSEEEECCTTTCCSSTTBCTTSCBCHHHHHHHHTTSCGG
T ss_pred CcEEEEeeecccCCcccCCCCCCCcHHHHHHHHHhCChh
Confidence 4 3344 666655 66666777888777655
No 448
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=89.35 E-value=1.7 Score=37.64 Aligned_cols=79 Identities=19% Similarity=0.207 Sum_probs=50.1
Q ss_pred HHHHHHHHHhcccccEEEEecc-CCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCC-------------C----cHH
Q psy4398 157 ACNILTTLISNLSIPVSCKIRV-FHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHR-------------N----RIE 218 (306)
Q Consensus 157 ~~eiv~~v~~~~~~pv~vKir~-g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p-------------~----~~~ 218 (306)
+.+.++.+++.-...+..-+-. .++.+++.+.++.++++|+|.|.+.....+....+| . .++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~ 84 (262)
T 1rd5_A 5 VSDTMAALMAKGKTAFIPYITAGDPDLATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLE 84 (262)
T ss_dssp HHHHHHHHHHTTCCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHH
T ss_pred HHHHHHHHHhcCCceEEEEeeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHH
Confidence 3445555554323344444433 356688999999999999999999543222111111 1 256
Q ss_pred HHHHHHhhCCCcEEEec
Q psy4398 219 MIRTLTQHLKIPVIANG 235 (306)
Q Consensus 219 ~v~~i~~~~~ipvia~G 235 (306)
.++++++.+++|++..+
T Consensus 85 ~i~~ir~~~~~Pv~~m~ 101 (262)
T 1rd5_A 85 MLREVTPELSCPVVLLS 101 (262)
T ss_dssp HHHHHGGGCSSCEEEEC
T ss_pred HHHHHHhcCCCCEEEEe
Confidence 78899988899998875
No 449
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=89.34 E-value=4.4 Score=36.25 Aligned_cols=88 Identities=15% Similarity=0.155 Sum_probs=59.1
Q ss_pred EEEecCCCHHHHHHHHHHHh-cCCCEEEEcc-------CCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEe
Q psy4398 105 ILQIGTADPERALEAAKKVE-HDVAAIDINM-------GCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKI 176 (306)
Q Consensus 105 ivql~g~~~~~~~~aa~~~~-~g~d~veln~-------gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKi 176 (306)
++=+...|. -.|+.++ .|||+|=+-= |.|.. ..-..+.....+++|...++.||.+-+
T Consensus 31 i~~~~ayD~----~sA~l~e~aG~dai~vs~~s~a~~~G~pD~----------~~vt~~em~~~~~~I~r~~~~pviaD~ 96 (305)
T 3ih1_A 31 LQIPGAHDA----MAALVARNTGFLALYLSGAAYTASKGLPDL----------GIVTSTEVAERARDLVRATDLPVLVDI 96 (305)
T ss_dssp EEEEBCSSH----HHHHHHHHTTCSCEEECHHHHHHHHTCCSS----------SCSCHHHHHHHHHHHHHHHCCCEEEEC
T ss_pred EEEecCcCH----HHHHHHHHcCCCEEEECcHHHHHhCCCCCC----------CcCCHHHHHHHHHHHHHhcCCCEEEEC
Confidence 333445553 2445555 4999988742 22321 112345556666777777789999999
Q ss_pred ccCC-ChHHHHHHHHHHHHcCCcEEEEcccC
Q psy4398 177 RVFH-NEADTIALCKRLEACGIIAIGVHGRT 206 (306)
Q Consensus 177 r~g~-~~~~~~~~a~~l~~~G~d~i~v~~~~ 206 (306)
..|. +.....+.++.++++|+++|++-+..
T Consensus 97 d~Gyg~~~~v~~~v~~l~~aGaagv~iED~~ 127 (305)
T 3ih1_A 97 DTGFGGVLNVARTAVEMVEAKVAAVQIEDQQ 127 (305)
T ss_dssp TTCSSSHHHHHHHHHHHHHTTCSEEEEECBC
T ss_pred CCCCCCHHHHHHHHHHHHHhCCcEEEECCCC
Confidence 8874 55668889999999999999997754
No 450
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=89.14 E-value=0.45 Score=45.64 Aligned_cols=64 Identities=22% Similarity=0.207 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhC-CCcEEEecCCCCHHHHHHHHHhhh
Q psy4398 183 ADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHL-KIPVIANGGSKEIVDYGGVFSLNC 251 (306)
Q Consensus 183 ~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~-~ipvia~GGI~s~~~~~~~l~~~v 251 (306)
.+..+.++.+.++|+|.|.++.... .. +..++.++++++.+ ++||++ |++.+.+.++.+.+.|+
T Consensus 228 ~~~~~~a~~l~~aG~d~I~id~a~g---~~-~~~~~~v~~i~~~~p~~~Vi~-g~v~t~e~a~~l~~aGa 292 (490)
T 4avf_A 228 ADTGERVAALVAAGVDVVVVDTAHG---HS-KGVIERVRWVKQTFPDVQVIG-GNIATAEAAKALAEAGA 292 (490)
T ss_dssp TTHHHHHHHHHHTTCSEEEEECSCC---SB-HHHHHHHHHHHHHCTTSEEEE-EEECSHHHHHHHHHTTC
T ss_pred cchHHHHHHHhhcccceEEecccCC---cc-hhHHHHHHHHHHHCCCceEEE-eeeCcHHHHHHHHHcCC
Confidence 3567788889999999999975421 11 23568899999998 788887 77899999999999865
No 451
>2okt_A OSB synthetase, O-succinylbenzoic acid synthetase; enolase, structural genom protein structure initiative, PSI, nysgrc; 1.30A {Staphylococcus aureus subsp} PDB: 2ola_A 3h70_A
Probab=89.13 E-value=1.8 Score=39.10 Aligned_cols=114 Identities=9% Similarity=0.007 Sum_probs=68.5
Q ss_pred ceEEEecCCCHHHHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc-cccEEEEeccCCC
Q psy4398 103 KIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL-SIPVSCKIRVFHN 181 (306)
Q Consensus 103 p~ivql~g~~~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~g~~ 181 (306)
|+...+.+.+.+++ .+.+++||..+-+.+| ++ -.+.++++|+.+ +..+.+-...+|+
T Consensus 121 ~~~~~~~g~~~e~~---~~~~~~G~~~~KiKvg------------------~~-d~~~v~avr~~~~~~~l~vDaN~~~~ 178 (342)
T 2okt_A 121 AYGATASGLSNKQL---ESLKATKPTRIKLKWT------------------PQ-IMHQIRVLRELDFHFQLVIDANESLD 178 (342)
T ss_dssp ECEEEESSCCHHHH---HHHHHHCCSEEEEECC------------------TT-HHHHHHHHTTSSSCCEEEEECTTCCC
T ss_pred eeeEEEecCCHHHH---HHHHHcCCcEEEEEeC------------------HH-HHHHHHHHHHhCCCCeEEEECCCCCC
Confidence 44444524344444 3334569999999654 22 257788888877 3345555555789
Q ss_pred hHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHh
Q psy4398 182 EADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSL 249 (306)
Q Consensus 182 ~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~ 249 (306)
.+++ ++++.+++.++.+|- ++. .+.+++..++ +.+++||.+-=.+.+..++.++++.
T Consensus 179 ~~~A-~~~~~l~~~~i~~iE-------qP~-~~~d~~~~~~--~~~~ipIa~dEs~~~~~~~~~~i~~ 235 (342)
T 2okt_A 179 RQDF-TQLQLLAREQVLYIE-------EPF-KDISMLDEVA--DGTIPPIALDEKATSLLDIINLIEL 235 (342)
T ss_dssp GGGH-HHHHHHGGGCEEEEE-------CCC-SSGGGGGGSC--TTSSCCEEESTTCCCHHHHHHHHHH
T ss_pred HHHH-HHHHHHhhCCCcEEE-------CCC-CCccHHHHHH--hcCCCCEEecCCCCCHHHHHHHHHh
Confidence 9999 999999998877664 111 1123333333 3446666665556666666666553
No 452
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=89.11 E-value=2.7 Score=38.29 Aligned_cols=110 Identities=15% Similarity=0.199 Sum_probs=66.8
Q ss_pred CCCceEEEecCC----CHHH-HHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEE
Q psy4398 100 EKNKIILQIGTA----DPER-ALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSC 174 (306)
Q Consensus 100 ~~~p~ivql~g~----~~~~-~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~v 174 (306)
.+.|+.||=..+ +.+. ..+..+..++|+|.|.+- +|. +...+.++.+++.+++|+.+
T Consensus 28 G~~Pi~VQSMtnt~T~D~~atv~Qi~~l~~aG~diVRva--vp~----------------~~~a~al~~I~~~~~vPlva 89 (366)
T 3noy_A 28 GDAPIVVQSMTSTKTHDVEATLNQIKRLYEAGCEIVRVA--VPH----------------KEDVEALEEIVKKSPMPVIA 89 (366)
T ss_dssp TTSCCEEEEECCSCTTCHHHHHHHHHHHHHTTCCEEEEE--CCS----------------HHHHHHHHHHHHHCSSCEEE
T ss_pred CCCcEEEEEecCCCCcCHHHHHHHHHHHHHcCCCEEEeC--CCC----------------hHHHHHHHHHHhcCCCCEEE
Confidence 357899995443 2333 333334445699999994 333 12257788888889999999
Q ss_pred EeccCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCc--EEEecCC
Q psy4398 175 KIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIP--VIANGGS 237 (306)
Q Consensus 175 Kir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ip--via~GGI 237 (306)
-+. .+. ++|..+.++|+|.+-+.+..... ...++.+-+.++..++| |-.|.|-
T Consensus 90 DiH--f~~----~lal~a~e~G~dklRINPGNig~----~~~~~~vv~~ak~~~~piRIGvN~GS 144 (366)
T 3noy_A 90 DIH--FAP----SYAFLSMEKGVHGIRINPGNIGK----EEIVREIVEEAKRRGVAVRIGVNSGS 144 (366)
T ss_dssp ECC--SCH----HHHHHHHHTTCSEEEECHHHHSC----HHHHHHHHHHHHHHTCEEEEEEEGGG
T ss_pred eCC--CCH----HHHHHHHHhCCCeEEECCcccCc----hhHHHHHHHHHHHcCCCEEEecCCcC
Confidence 988 453 45555678999999987543221 11233333333344666 4556663
No 453
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=89.11 E-value=0.79 Score=41.38 Aligned_cols=76 Identities=14% Similarity=0.010 Sum_probs=41.4
Q ss_pred HHHHHHHH-HHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc-cccEEEEeccCCChHHHHHHHHH
Q psy4398 114 ERALEAAK-KVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL-SIPVSCKIRVFHNEADTIALCKR 191 (306)
Q Consensus 114 ~~~~~aa~-~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~g~~~~~~~~~a~~ 191 (306)
+...+-|+ .+++|+|.|||+.-+-.+. -.-+..+..+.+..+++++++.+ ++||++-..- .+.+++
T Consensus 65 ~~a~~~A~~~v~~GAdIIDIGgeSTrPG-----~~v~~~eEl~Rv~pvI~~l~~~~~~vpISIDT~~-------~~Vaea 132 (318)
T 2vp8_A 65 AAARDAVHRAVADGADVIDVGGVKAGPG-----ERVDVDTEITRLVPFIEWLRGAYPDQLISVDTWR-------AQVAKA 132 (318)
T ss_dssp HHHHHHHHHHHHTTCSEEEEC---------------CHHHHHHHHHHHHHHHHHHSTTCEEEEECSC-------HHHHHH
T ss_pred HHHHHHHHHHHHCCCCEEEECCCcCCCC-----CCCCHHHHHHHHHHHHHHHHhhCCCCeEEEeCCC-------HHHHHH
Confidence 33344344 4557999999987552210 00112233455666788888876 8898887651 344445
Q ss_pred HHHcCCcEEE
Q psy4398 192 LEACGIIAIG 201 (306)
Q Consensus 192 l~~~G~d~i~ 201 (306)
..++|++.|.
T Consensus 133 Al~aGa~iIN 142 (318)
T 2vp8_A 133 ACAAGADLIN 142 (318)
T ss_dssp HHHHTCCEEE
T ss_pred HHHhCCCEEE
Confidence 5555776554
No 454
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=89.04 E-value=0.51 Score=43.52 Aligned_cols=81 Identities=17% Similarity=0.276 Sum_probs=51.6
Q ss_pred ccccEEEEecc----C-CChHHHHHHHHHHHHcCCcEEEEcccC------CCCCCCCC-CcHHHHHHHHhhCCCcEEEe-
Q psy4398 168 LSIPVSCKIRV----F-HNEADTIALCKRLEACGIIAIGVHGRT------KAERPRHR-NRIEMIRTLTQHLKIPVIAN- 234 (306)
Q Consensus 168 ~~~pv~vKir~----g-~~~~~~~~~a~~l~~~G~d~i~v~~~~------~~~~~~~p-~~~~~v~~i~~~~~ipvia~- 234 (306)
-+.|++.-+.. + ++.+...+.++.+ +++++.+|=.. +.+...-. ..++.++++++.+++||+.=
T Consensus 118 p~~~~~anlg~~ql~~~~~~~~~~~av~~~---~a~al~Ihln~~~~~~~p~g~~~~~~~~~~~i~~i~~~~~vPVivK~ 194 (368)
T 3vkj_A 118 PTIPIIANLGMPQLVKGYGLKEFQDAIQMI---EADAIAVHLNPAQEVFQPEGEPEYQIYALEKLRDISKELSVPIIVKE 194 (368)
T ss_dssp SSSCEEEEEEGGGGGTTCCHHHHHHHHHHT---TCSEEEEECCHHHHHHSSSCCCBCBTHHHHHHHHHHTTCSSCEEEEC
T ss_pred cCcceecCcCeeecCCCCCHHHHHHHHHHh---cCCCeEEEecchhhhhCCCCCchhhHHHHHHHHHHHHHcCCCEEEEe
Confidence 36788877775 3 5555555555444 55555554211 11111000 15788999999999999994
Q ss_pred -cCCCCHHHHHHHHHhhh
Q psy4398 235 -GGSKEIVDYGGVFSLNC 251 (306)
Q Consensus 235 -GGI~s~~~~~~~l~~~v 251 (306)
|+-.++++++.+.+.|+
T Consensus 195 vG~g~s~~~A~~l~~aGa 212 (368)
T 3vkj_A 195 SGNGISMETAKLLYSYGI 212 (368)
T ss_dssp SSSCCCHHHHHHHHHTTC
T ss_pred CCCCCCHHHHHHHHhCCC
Confidence 55578999999998876
No 455
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=89.03 E-value=2.5 Score=39.22 Aligned_cols=92 Identities=18% Similarity=0.086 Sum_probs=62.9
Q ss_pred cccEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcccCCC------------------------------C-------CC
Q psy4398 169 SIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKA------------------------------E-------RP 211 (306)
Q Consensus 169 ~~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~------------------------------~-------~~ 211 (306)
+.|+++-+-...+.+...++++.++++|++++.++-.... . ..
T Consensus 146 ~~~~~~QLy~~~d~~~~~~~~~ra~~~G~~al~itvd~p~~g~R~~d~r~~~~lp~~~~~~n~~~~~~~~~p~~~~~~g~ 225 (392)
T 2nzl_A 146 EALRWLQLYIYKDREVTKKLVRQAEKMGYKAIFVTVDTPYLGNRLDDVRNRFKLPPQLRMKNFETSTLSFSPEENFGDDS 225 (392)
T ss_dssp TSEEEEEECCBSSHHHHHHHHHHHHHTTCCCEEEECSCSSCCCCHHHHHHTCCCCTTCCCTTC-----------------
T ss_pred CCcEEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCCCCCccchhHhHhhccCCccccchhhhhhhhcccCccccccCcc
Confidence 4688888764456677889999999999999887421100 0 00
Q ss_pred ----------CCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhh-------hhccccCCCC
Q psy4398 212 ----------RHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNC-------AFLRNHYPVE 261 (306)
Q Consensus 212 ----------~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v-------~vGrall~~p 261 (306)
.....|+.++++++.+++||+.- |+.+.++++.+.+.|+ --||.+..+|
T Consensus 226 ~~~~~~~~~~d~~~~~~~i~~lr~~~~~PvivK-gv~~~e~A~~a~~aGad~I~vs~~ggr~~~~g~ 291 (392)
T 2nzl_A 226 GLAAYVAKAIDPSISWEDIKWLRRLTSLPIVAK-GILRGDDAREAVKHGLNGILVSNHGARQLDGVP 291 (392)
T ss_dssp CHHHHHHHHBCTTCCHHHHHHHC--CCSCEEEE-EECCHHHHHHHHHTTCCEEEECCGGGTSSTTCC
T ss_pred hHHHHHhhcCChHHHHHHHHHHHHhhCCCEEEE-ecCCHHHHHHHHHcCCCEEEeCCCCCCcCCCCc
Confidence 11146888999999999999876 4688999999998865 2255555555
No 456
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=89.01 E-value=3 Score=36.72 Aligned_cols=113 Identities=15% Similarity=0.173 Sum_probs=69.2
Q ss_pred EEecCCCHHHHHHHHHHHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhccccc-EEEEeccC---C
Q psy4398 106 LQIGTADPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIP-VSCKIRVF---H 180 (306)
Q Consensus 106 vql~g~~~~~~~~aa~~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~p-v~vKir~g---~ 180 (306)
+-+...|. -.|+.++ .|+|.| + .|.-..+. .-++-....-..+.....+++|+..++.| |.+-+..| .
T Consensus 20 ~~~tayDa----~sA~l~e~aG~d~i-l-vGdSl~~~-~lG~~dt~~vTldemi~h~~aV~r~~~~~~vvaD~pfgsy~~ 92 (275)
T 1o66_A 20 AMLTAYES----SFAALMDDAGVEML-L-VGDSLGMA-VQGRKSTLPVSLRDMCYHTECVARGAKNAMIVSDLPFGAYQQ 92 (275)
T ss_dssp EEEECCSH----HHHHHHHHTTCCEE-E-ECTTHHHH-TTCCSSSTTCCHHHHHHHHHHHHHHCSSSEEEEECCTTSSSS
T ss_pred EEEeCcCH----HHHHHHHHcCCCEE-E-ECHHHHHH-HcCCCCCCCCCHHHHHHHHHHHHhhCCCCeEEEECCCCCccC
Confidence 34555553 3455565 499998 4 23222211 12232233345666777778887777654 55665543 2
Q ss_pred ChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEe
Q psy4398 181 NEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIAN 234 (306)
Q Consensus 181 ~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~ 234 (306)
+.+++.+.+..+.++|+++|.+-+.. ...+.++.+.++ ++||++.
T Consensus 93 s~~~a~~na~rl~kaGa~aVklEdg~--------e~~~~I~al~~a-gIpV~gH 137 (275)
T 1o66_A 93 SKEQAFAAAAELMAAGAHMVKLEGGV--------WMAETTEFLQMR-GIPVCAH 137 (275)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECSG--------GGHHHHHHHHHT-TCCEEEE
T ss_pred CHHHHHHHHHHHHHcCCcEEEECCcH--------HHHHHHHHHHHc-CCCeEee
Confidence 56778888889999999999997641 234556666554 7999843
No 457
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=88.99 E-value=0.77 Score=42.81 Aligned_cols=61 Identities=18% Similarity=0.193 Sum_probs=46.8
Q ss_pred HHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhh
Q psy4398 186 IALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNC 251 (306)
Q Consensus 186 ~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v 251 (306)
.+.++.+.++|+|.|.+.... ... ....+.++++++.+++|||+ |++.+.+.++.+.+.|+
T Consensus 146 ~e~~~~lveaGvdvIvldta~---G~~-~~~~e~I~~ik~~~~i~Vi~-g~V~t~e~A~~a~~aGA 206 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAH---GHS-LNIIRTLKEIKSKMNIDVIV-GNVVTEEATKELIENGA 206 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSC---CSB-HHHHHHHHHHHTTCCCEEEE-EEECSHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCEEEEeCCC---CCc-ccHHHHHHHHHhcCCCeEEE-eecCCHHHHHHHHHcCC
Confidence 678899999999999874221 111 11357889999988999986 67889999999998865
No 458
>2fiq_A Putative tagatose 6-phosphate kinase 1; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics; 2.25A {Escherichia coli} SCOP: c.1.10.7
Probab=88.95 E-value=1.2 Score=41.77 Aligned_cols=71 Identities=11% Similarity=0.118 Sum_probs=51.0
Q ss_pred ChHHHHHHHH----HHHHcCCcE-------EEEcccCCCCCCC-CCCcHHHHHHHHhhCCCc-EEE--ecCC-CCHHHHH
Q psy4398 181 NEADTIALCK----RLEACGIIA-------IGVHGRTKAERPR-HRNRIEMIRTLTQHLKIP-VIA--NGGS-KEIVDYG 244 (306)
Q Consensus 181 ~~~~~~~~a~----~l~~~G~d~-------i~v~~~~~~~~~~-~p~~~~~v~~i~~~~~ip-via--~GGI-~s~~~~~ 244 (306)
++++..++++ .|.+.|+|. |.+.-.+.-+.+. ...+++.+++|++.+++| ++. .||- .+.++.+
T Consensus 189 ~PeeA~~Fve~~~~~~~~tGvd~~~~~vi~LAV~iGt~HG~y~~~~ld~e~l~~I~~~v~~P~LVle~HGgSg~~~e~l~ 268 (420)
T 2fiq_A 189 HVEDAANTLRTHQKAFIARGLTEALTRVIAIVVQPGVEFDHSNIIHYQPQEAQALAQWIENTRMVYEAHSTDYQTRTAYW 268 (420)
T ss_dssp CHHHHHHHHHHHHHHHHTTTCHHHHHTEEEEECCCSCEECSSCEECCCGGGGHHHHHHHTTSSCEEEESCCTTCCHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhhCCCcccccceEEEEeCCccCCCCCCCCcCHHHHHHHHHhcCCCCEEEecCCCCCCCHHHHH
Confidence 4566777776 777899999 7765554433342 236889999999999999 888 7775 3566778
Q ss_pred HHHHhhh
Q psy4398 245 GVFSLNC 251 (306)
Q Consensus 245 ~~l~~~v 251 (306)
++++.|+
T Consensus 269 ~~v~~Gi 275 (420)
T 2fiq_A 269 ELVRDHF 275 (420)
T ss_dssp HHHHTTE
T ss_pred HHHHcCC
Confidence 8877644
No 459
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=88.88 E-value=3.6 Score=35.96 Aligned_cols=112 Identities=13% Similarity=0.132 Sum_probs=68.5
Q ss_pred EEecCCCHHHHHHHHHHHhc-CCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhccccc-EEEEeccC-C-C
Q psy4398 106 LQIGTADPERALEAAKKVEH-DVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIP-VSCKIRVF-H-N 181 (306)
Q Consensus 106 vql~g~~~~~~~~aa~~~~~-g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~p-v~vKir~g-~-~ 181 (306)
+-+...|. -.|+.+++ |+|.|=+ |....+. .-|+-....-..+....-+++|+..++.| |.+-+.-| . +
T Consensus 20 ~~~tayD~----~sA~l~e~aG~d~ilv--Gdsl~~~-~lG~~dt~~vtldemi~h~~aV~r~~~~~~vvaD~pfgsy~~ 92 (264)
T 1m3u_A 20 ATITAYDY----SFAKLFADEGLNVMLV--GDSLGMT-VQGHDSTLPVTVADIAYHTAAVRRGAPNCLLLADLPFMAYAT 92 (264)
T ss_dssp EEEECCSH----HHHHHHHHHTCCEEEE--CTTHHHH-TTCCSSSTTCCHHHHHHHHHHHHHHCTTSEEEEECCTTSSSS
T ss_pred EEEeCcCH----HHHHHHHHcCCCEEEE--CHHHHHH-HcCCCCCCCcCHHHHHHHHHHHHhhCCCCcEEEECCCCCcCC
Confidence 34555553 34555654 9999966 4322221 12232233334566666778887777654 55555542 1 5
Q ss_pred hHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEE
Q psy4398 182 EADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIA 233 (306)
Q Consensus 182 ~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia 233 (306)
.+++.+.+..+.++|+++|.+-+.. ...+.++.+.++ ++||++
T Consensus 93 ~~~a~~~a~rl~kaGa~aVklEgg~--------e~~~~I~al~~a-gipV~g 135 (264)
T 1m3u_A 93 PEQAFENAATVMRAGANMVKIEGGE--------WLVETVQMLTER-AVPVCG 135 (264)
T ss_dssp HHHHHHHHHHHHHTTCSEEECCCSG--------GGHHHHHHHHHT-TCCEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEECCcH--------HHHHHHHHHHHC-CCCeEe
Confidence 6778888889999999999987641 234566666554 799984
No 460
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=88.85 E-value=1.9 Score=38.09 Aligned_cols=61 Identities=11% Similarity=0.103 Sum_probs=35.3
Q ss_pred CHHHHHHHHH-HHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEec
Q psy4398 112 DPERALEAAK-KVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIR 177 (306)
Q Consensus 112 ~~~~~~~aa~-~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir 177 (306)
+++...+.|+ .+++|+|.|+|+.-+..+.. -.-+..+..+.+..+++++++. ++||++-..
T Consensus 27 ~~~~a~~~a~~~v~~GAdiIDIGgestrpga----~~v~~~eE~~Rv~pvi~~l~~~-~~piSIDT~ 88 (280)
T 1eye_A 27 DLDDAVKHGLAMAAAGAGIVDVGGESSRPGA----TRVDPAVETSRVIPVVKELAAQ-GITVSIDTM 88 (280)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEECC------------------HHHHHHHHHHHHHT-TCCEEEECS
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCccCCCCC----CCCCHHHHHHHHHHHHHHhhcC-CCEEEEeCC
Confidence 5666666555 44579999999964421100 0012234566777888888776 889988755
No 461
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=88.78 E-value=1.9 Score=39.41 Aligned_cols=81 Identities=6% Similarity=0.037 Sum_probs=51.8
Q ss_pred cccccEEEEeccCCChHHHHHHHHHHH---HcCCcEEEEccc--CCCC-CCC--CC-CcHHHHHHHHhhCCCcEEEecCC
Q psy4398 167 NLSIPVSCKIRVFHNEADTIALCKRLE---ACGIIAIGVHGR--TKAE-RPR--HR-NRIEMIRTLTQHLKIPVIANGGS 237 (306)
Q Consensus 167 ~~~~pv~vKir~g~~~~~~~~~a~~l~---~~G~d~i~v~~~--~~~~-~~~--~p-~~~~~v~~i~~~~~ipvia~GGI 237 (306)
..+.|+.+-+. |.+.++..+.++.++ +.|+|+|.+.-. ...+ ... .| ...++++.+++.+++||+.=-..
T Consensus 124 ~~~~pvivsI~-G~~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~~gg~~l~~~~e~~~~il~av~~~~~~PV~vKi~p 202 (354)
T 4ef8_A 124 YGKKPLFLSMS-GLSMRENVEMCKRLAAVATEKGVILELNLSCPNVPGKPQVAYDFDAMRQCLTAVSEVYPHSFGVKMPP 202 (354)
T ss_dssp TTTCCEEEEEC-CSSHHHHHHHHHHHHHHHHHHCCEEEEECSSCCSTTSCCGGGSHHHHHHHHHHHHHHCCSCEEEEECC
T ss_pred cCCCcEEEEec-cCCHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCCCCchhhccCHHHHHHHHHHHHHhhCCCeEEEecC
Confidence 34678887763 467889999999998 679999997432 2111 111 11 12456788888889998765443
Q ss_pred C-CHHHHHHHHH
Q psy4398 238 K-EIVDYGGVFS 248 (306)
Q Consensus 238 ~-s~~~~~~~l~ 248 (306)
. |.++..++.+
T Consensus 203 ~~d~~~~~~~a~ 214 (354)
T 4ef8_A 203 YFDFAHFDAAAE 214 (354)
T ss_dssp CCSHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 2 4555555443
No 462
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=88.73 E-value=6.4 Score=33.53 Aligned_cols=122 Identities=8% Similarity=-0.036 Sum_probs=71.5
Q ss_pred HHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEeccCCChHHHHHHHHHHHHcCCcEE
Q psy4398 122 KVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAI 200 (306)
Q Consensus 122 ~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i 200 (306)
.++ .|+|.|-|+.+. |+..++ .+.+.++...+ .+.-..+=+. .. .+. +.+.+.+.+.|
T Consensus 83 ~l~~~Ga~~Vllghse-----RR~~~~--------e~~~k~~~A~~-~GL~~ivcVg--e~-~e~----~~~~~~~~~iI 141 (225)
T 1hg3_A 83 AVKEAGAVGTLLNHSE-----NRMILA--------DLEAAIRRAEE-VGLMTMVCSN--NP-AVS----AAVAALNPDYV 141 (225)
T ss_dssp HHHHTTCCEEEESCGG-----GCCBHH--------HHHHHHHHHHH-HTCEEEEEES--SH-HHH----HHHHTTCCSEE
T ss_pred HHHHcCCCEEEECcch-----hcCCHH--------HHHHHHHHHHH-CCCEEEEEeC--CH-HHH----HHHhcCCCCEE
Confidence 444 499999997664 222221 13444444433 2555555555 21 221 34456677877
Q ss_pred EEcccCCCCCC----C-CCCcHHHH-HHHHhhC-CCcEEEecCCCCHHHHHHHHHh---hhhhccccCCCCCch
Q psy4398 201 GVHGRTKAERP----R-HRNRIEMI-RTLTQHL-KIPVIANGGSKEIVDYGGVFSL---NCAFLRNHYPVEKLP 264 (306)
Q Consensus 201 ~v~~~~~~~~~----~-~p~~~~~v-~~i~~~~-~ipvia~GGI~s~~~~~~~l~~---~v~vGrall~~p~~~ 264 (306)
-+.++...+.- . .+...+.+ +.+++.. +++|++-|||++.++.+.+... |+-+|++++.-+.+.
T Consensus 142 ayep~waiGtG~~v~t~~~d~~~~~~~~ir~~~~~~~ilyggsV~~~n~~~~~~~~~vDG~LVG~a~l~a~~~~ 215 (225)
T 1hg3_A 142 AVEPPELIGTGIPVSKAKPEVITNTVELVKKVNPEVKVLCGAGISTGEDVKKAIELGTVGVLLASGVTKAKDPE 215 (225)
T ss_dssp EECCTTTTTTSCCTTTSCTHHHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHTTCSEEEESHHHHTCSSHH
T ss_pred EEeChhhhccCCCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCcHHHHHHHHhCCCCEEEeCHHHHCCcCHH
Confidence 77766543222 1 12113332 3344433 6899999999999999888776 459999998654443
No 463
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=88.71 E-value=3.5 Score=34.80 Aligned_cols=81 Identities=20% Similarity=0.249 Sum_probs=61.3
Q ss_pred HHHHHHhcccccEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCC
Q psy4398 160 ILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKE 239 (306)
Q Consensus 160 iv~~v~~~~~~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s 239 (306)
+++.+++ .|+..=+|. .+.++..++++.+.+.|++.+.+.-++ +...+.++++++.+.-.+++.|-+.+
T Consensus 9 ~~~~l~~---~~~i~v~r~-~~~~~~~~~~~al~~gGv~~iel~~k~-------~~~~~~i~~l~~~~~~~~vgagtvi~ 77 (214)
T 1wbh_A 9 AESILTT---GPVVPVIVV-KKLEHAVPMAKALVAGGVRVLNVTLRT-------ECAVDAIRAIAKEVPEAIVGAGTVLN 77 (214)
T ss_dssp HHHHHHS---CSEEEEECC-SSGGGHHHHHHHHHHTTCCEEEEESCS-------TTHHHHHHHHHHHCTTSEEEEESCCS
T ss_pred HHHHHHH---CCEEEEEEC-CCHHHHHHHHHHHHHcCCCEEEEeCCC-------hhHHHHHHHHHHHCcCCEEeeCEEEE
Confidence 3444443 356655663 467789999999999999999997442 34567888899988656778888999
Q ss_pred HHHHHHHHHhhh
Q psy4398 240 IVDYGGVFSLNC 251 (306)
Q Consensus 240 ~~~~~~~l~~~v 251 (306)
.++++.+++.++
T Consensus 78 ~d~~~~A~~aGA 89 (214)
T 1wbh_A 78 PQQLAEVTEAGA 89 (214)
T ss_dssp HHHHHHHHHHTC
T ss_pred HHHHHHHHHcCC
Confidence 999999998754
No 464
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=88.71 E-value=2.1 Score=36.59 Aligned_cols=85 Identities=21% Similarity=0.298 Sum_probs=55.6
Q ss_pred CceEEEecCCCHHHHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhc--ccccEEEEeccC
Q psy4398 102 NKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISN--LSIPVSCKIRVF 179 (306)
Q Consensus 102 ~p~ivql~g~~~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~--~~~pv~vKir~g 179 (306)
.++++.+--.+.++..+.++.+...++.+.++... - -.+| + ++++++++. ..+.+++|+-
T Consensus 13 ~~lilAlD~~~~~~a~~~v~~~~~~v~~~Kvg~~l--f----~~~G------~----~~v~~l~~~~g~~v~lD~Kl~-- 74 (228)
T 3m47_A 13 NRLILAMDLMNRDDALRVTGEVREYIDTVKIGYPL--V----LSEG------M----DIIAEFRKRFGCRIIADFKVA-- 74 (228)
T ss_dssp GGEEEECCCCSHHHHHHHHHTTTTTCSEEEEEHHH--H----HHHC------T----HHHHHHHHHHCCEEEEEEEEC--
T ss_pred CCeEEEeCCCCHHHHHHHHHHcCCcccEEEEcHHH--H----HhcC------H----HHHHHHHhcCCCeEEEEEeec--
Confidence 46888876667666665555544457888885421 1 0122 2 345556553 4577888887
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEcc
Q psy4398 180 HNEADTIALCKRLEACGIIAIGVHG 204 (306)
Q Consensus 180 ~~~~~~~~~a~~l~~~G~d~i~v~~ 204 (306)
.-..+....++.+.++|+|.+++|+
T Consensus 75 DipnTv~~~~~~~~~~gad~vtvh~ 99 (228)
T 3m47_A 75 DIPETNEKICRATFKAGADAIIVHG 99 (228)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEES
T ss_pred ccHhHHHHHHHHHHhCCCCEEEEec
Confidence 4444567788889999999999986
No 465
>1kko_A 3-methylaspartate ammonia-lyase; enolase superfamily, TIM barrel; 1.33A {Citrobacter amalonaticus} SCOP: c.1.11.2 d.54.1.1 PDB: 1kkr_A*
Probab=88.64 E-value=2.1 Score=39.94 Aligned_cols=117 Identities=9% Similarity=-0.003 Sum_probs=78.0
Q ss_pred HHHHHHHHHhccc--ccEEEEecc------CCChHHHHHHHHHHHHcCCcE-EEEcccCCCCCCC-C--CCcHHHHHHHH
Q psy4398 157 ACNILTTLISNLS--IPVSCKIRV------FHNEADTIALCKRLEACGIIA-IGVHGRTKAERPR-H--RNRIEMIRTLT 224 (306)
Q Consensus 157 ~~eiv~~v~~~~~--~pv~vKir~------g~~~~~~~~~a~~l~~~G~d~-i~v~~~~~~~~~~-~--p~~~~~v~~i~ 224 (306)
..+.++++|+.++ +.+.+-... +|+.+++.++++.|++.|+.. +-+ +++.. + +.+++-.++++
T Consensus 218 d~~~v~aiR~~~G~~~~L~vDan~~~~~~~~~~~~~A~~~~~~L~~~~~~~~l~i-----EqP~~~~~~~~d~~~~~~l~ 292 (413)
T 1kko_A 218 LSDRILSLRSSPRYHPTLHIDVYGTIGLIFDMDPVRCAEYIASLEKEAQGLPLYI-----EGPVDAGNKPDQIRMLTAIT 292 (413)
T ss_dssp HHHHHHHHCSSTTCCCEEEEECTTHHHHHTTTCHHHHHHHHHHTGGGGTTSCEEE-----ECCCCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCCeEEEECCCccccccCCCHHHHHHHHHHHHhccCCcceEE-----ECCcCCCCCcccHHHHHHHH
Confidence 3478899988874 445555555 688899999999999976541 122 22221 1 34788889999
Q ss_pred hh-----CCCcEEEecCCCCHHHHHHHHHhhh----hhccccCCCCCchHHHHHHHHHhcCCCC
Q psy4398 225 QH-----LKIPVIANGGSKEIVDYGGVFSLNC----AFLRNHYPVEKLPKTILYAHCKYKRFEV 279 (306)
Q Consensus 225 ~~-----~~ipvia~GGI~s~~~~~~~l~~~v----~vGrall~~p~~~~~~l~~~~~~~g~~~ 279 (306)
+. +++||.+-=-+++.++++++++.+. ++=-. ..+-...-+.+.++.+++|++.
T Consensus 293 ~~l~~~g~~ipIa~dE~~~~~~~~~~~i~~~a~d~i~ik~~-~~GGitea~~i~~~A~~~gi~~ 355 (413)
T 1kko_A 293 KELTRLGSGVKIVADEWCNTYQDIVDFTDAGSCHMVQIKTP-DLGGIHNIVDAVLYCNKHGMEA 355 (413)
T ss_dssp HHHHHHTCCCEEEECTTCCSHHHHHHHHHTTCCSEEEECGG-GGSSTHHHHHHHHHHHHHTCEE
T ss_pred HhcccCCCCCcEEcCCCCCCHHHHHHHHHhCCCCEEEeCcc-ccCCHHHHHHHHHHHHHcCCeE
Confidence 88 8899988777899999999887532 11000 0011122247778888999873
No 466
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=88.60 E-value=5 Score=34.09 Aligned_cols=81 Identities=20% Similarity=0.146 Sum_probs=59.7
Q ss_pred HHHHHHhcccccEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCC
Q psy4398 160 ILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKE 239 (306)
Q Consensus 160 iv~~v~~~~~~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s 239 (306)
+++.+++. |+..=+|. .+.++..++++.+.+.|++.|.+.-++ +...+.++++++.+.--+++.|-+.+
T Consensus 10 ~~~~l~~~---~ii~vir~-~~~~~~~~~~~al~~gGv~~iel~~k~-------~~~~~~i~~l~~~~~~l~vgaGtvl~ 78 (224)
T 1vhc_A 10 IIEKLREL---KIVPVIAL-DNADDILPLADTLAKNGLSVAEITFRS-------EAAADAIRLLRANRPDFLIAAGTVLT 78 (224)
T ss_dssp HHHHHHHH---CEEEEECC-SSGGGHHHHHHHHHHTTCCEEEEETTS-------TTHHHHHHHHHHHCTTCEEEEESCCS
T ss_pred HHHHHHHC---CeEEEEeC-CCHHHHHHHHHHHHHcCCCEEEEeccC-------chHHHHHHHHHHhCcCcEEeeCcEee
Confidence 44444443 55555553 467789999999999999999997432 34567888899988545667777889
Q ss_pred HHHHHHHHHhhh
Q psy4398 240 IVDYGGVFSLNC 251 (306)
Q Consensus 240 ~~~~~~~l~~~v 251 (306)
.++++.+++.++
T Consensus 79 ~d~~~~A~~aGA 90 (224)
T 1vhc_A 79 AEQVVLAKSSGA 90 (224)
T ss_dssp HHHHHHHHHHTC
T ss_pred HHHHHHHHHCCC
Confidence 999999988754
No 467
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=88.59 E-value=0.59 Score=44.88 Aligned_cols=64 Identities=11% Similarity=0.144 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhC-CCcEEEecCCCCHHHHHHHHHhhh
Q psy4398 183 ADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHL-KIPVIANGGSKEIVDYGGVFSLNC 251 (306)
Q Consensus 183 ~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~-~ipvia~GGI~s~~~~~~~l~~~v 251 (306)
++..+.++.+.++|+|.|.++.... . ....++.++++++.+ ++||++ |++.+.+.++.+++.|+
T Consensus 230 ~d~~~~a~~l~~aG~d~I~id~a~g---~-~~~~~~~i~~ir~~~p~~~Vi~-g~v~t~e~a~~l~~aGa 294 (496)
T 4fxs_A 230 PGNEERVKALVEAGVDVLLIDSSHG---H-SEGVLQRIRETRAAYPHLEIIG-GNVATAEGARALIEAGV 294 (496)
T ss_dssp SCCHHHHHHHHHTTCSEEEEECSCT---T-SHHHHHHHHHHHHHCTTCCEEE-EEECSHHHHHHHHHHTC
T ss_pred cchHHHHHHHHhccCceEEeccccc---c-chHHHHHHHHHHHHCCCceEEE-cccCcHHHHHHHHHhCC
Confidence 3457778888899999999975531 1 123568899999998 889987 77899999999998865
No 468
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=88.51 E-value=0.57 Score=45.08 Aligned_cols=63 Identities=16% Similarity=0.191 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhC-CCcEEEecCCCCHHHHHHHHHhhh
Q psy4398 184 DTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHL-KIPVIANGGSKEIVDYGGVFSLNC 251 (306)
Q Consensus 184 ~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~-~ipvia~GGI~s~~~~~~~l~~~v 251 (306)
+..+.++.+.++|+|.|.++... .+. ...++.++++++.+ ++||++ |++.+.++++.+.+.|+
T Consensus 255 ~~~~~a~~~~~aG~d~v~i~~~~---G~~-~~~~~~i~~i~~~~~~~pvi~-~~v~t~~~a~~l~~aGa 318 (514)
T 1jcn_A 255 DDKYRLDLLTQAGVDVIVLDSSQ---GNS-VYQIAMVHYIKQKYPHLQVIG-GNVVTAAQAKNLIDAGV 318 (514)
T ss_dssp THHHHHHHHHHTTCSEEEECCSC---CCS-HHHHHHHHHHHHHCTTCEEEE-EEECSHHHHHHHHHHTC
T ss_pred hhHHHHHHHHHcCCCEEEeeccC---Ccc-hhHHHHHHHHHHhCCCCceEe-cccchHHHHHHHHHcCC
Confidence 35677888889999999997542 111 12468899999999 899986 67899999999998876
No 469
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=88.51 E-value=1.9 Score=38.52 Aligned_cols=132 Identities=8% Similarity=0.071 Sum_probs=79.3
Q ss_pred CCHHHHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEecc--C------CCh
Q psy4398 111 ADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRV--F------HNE 182 (306)
Q Consensus 111 ~~~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~--g------~~~ 182 (306)
.+.+++..+ ++.|+|.|.+-.++- ....+...+.+..+..+.+.++++.+++. +..+.+-+.. + .+.
T Consensus 82 ~~~~~i~~a---~~~g~~~v~i~~~~s-d~~~~~~l~~s~~e~l~~~~~~v~~ak~~-G~~v~~~i~~~~~~~~~~~~~~ 156 (307)
T 1ydo_A 82 PNQRGLENA---LEGGINEACVFMSAS-ETHNRKNINKSTSESLHILKQVNNDAQKA-NLTTRAYLSTVFGCPYEKDVPI 156 (307)
T ss_dssp CSHHHHHHH---HHHTCSEEEEEEESS-HHHHHTTTCSCHHHHHHHHHHHHHHHHHT-TCEEEEEEECTTCBTTTBCCCH
T ss_pred CCHHhHHHH---HhCCcCEEEEEeecC-HHHHHHHhCCCHHHHHHHHHHHHHHHHHC-CCEEEEEEEEEecCCcCCCCCH
Confidence 455444333 234999988855432 22223334444444556667777777664 5555444432 1 356
Q ss_pred HHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCC-cHHHHHHHHhhC-CCcEEEec----CCCCHHHHHHHHHhhh
Q psy4398 183 ADTIALCKRLEACGIIAIGVHGRTKAERPRHRN-RIEMIRTLTQHL-KIPVIANG----GSKEIVDYGGVFSLNC 251 (306)
Q Consensus 183 ~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~-~~~~v~~i~~~~-~ipvia~G----GI~s~~~~~~~l~~~v 251 (306)
+...++++.+.++|+|.|.+-+... ...|. ..++++.+++.+ ++||-.-+ |.. ......++++|+
T Consensus 157 ~~~~~~~~~~~~~Ga~~i~l~DT~G---~~~P~~v~~lv~~l~~~~~~~~l~~H~Hnd~Gla-~AN~laAv~aGa 227 (307)
T 1ydo_A 157 EQVIRLSEALFEFGISELSLGDTIG---AANPAQVETVLEALLARFPANQIALHFHDTRGTA-LANMVTALQMGI 227 (307)
T ss_dssp HHHHHHHHHHHHHTCSCEEEECSSC---CCCHHHHHHHHHHHHTTSCGGGEEEECBGGGSCH-HHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCC---CcCHHHHHHHHHHHHHhCCCCeEEEEECCCCchH-HHHHHHHHHhCC
Confidence 7799999999999999999875432 22232 356788888888 57876653 322 444556666665
No 470
>1r6w_A OSB synthase, O-succinylbenzoate synthase, OSBS; enolase superfamily, TIM barrel, capping alpha+beta domain, lyase; HET: 164; 1.62A {Escherichia coli} SCOP: c.1.11.2 d.54.1.1 PDB: 1fhv_A* 1fhu_A 2ofj_A 3gc2_A*
Probab=88.27 E-value=1.5 Score=39.43 Aligned_cols=104 Identities=10% Similarity=0.114 Sum_probs=68.9
Q ss_pred CCCHHHHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc-cccEEEEeccCCChHHHHHH
Q psy4398 110 TADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL-SIPVSCKIRVFHNEADTIAL 188 (306)
Q Consensus 110 g~~~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~g~~~~~~~~~ 188 (306)
..+++++.+.++.. .||..+-+.+|.+ +++.-.+.++++|+.+ +..+.+-...+|+.+++.++
T Consensus 113 ~~~~~~~~~~a~~~-~G~~~~KiKvG~~---------------~~~~d~~~v~avr~~~~~~~l~vDaN~~~~~~~A~~~ 176 (322)
T 1r6w_A 113 NGDPDDLILKLADM-PGEKVAKVRVGLY---------------EAVRDGMVVNLLLEAIPDLHLRLDANRAWTPLKGQQF 176 (322)
T ss_dssp CSCHHHHHHHHHTC-CSSEEEEEECSSS---------------CHHHHHHHHHHHHHHCTTEEEEEECTTCBCHHHHHHH
T ss_pred CCCHHHHHHHHHHh-CCCceEEEEeCCC---------------CHHHHHHHHHHHHHhCCCCeEEEeCCCCCCHHHHHHH
Confidence 45777766555443 5999999876531 3455567788888876 23344444446888999999
Q ss_pred HHHHHHc---CCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCC
Q psy4398 189 CKRLEAC---GIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKE 239 (306)
Q Consensus 189 a~~l~~~---G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s 239 (306)
++.+++. ++.+|- ++.. +++..+++++.+++||.+-=.+.+
T Consensus 177 ~~~l~~~~~~~i~~iE-------qP~~---~~~~~~~l~~~~~ipIa~dE~~~~ 220 (322)
T 1r6w_A 177 AKYVNPDYRDRIAFLE-------EPCK---TRDDSRAFARETGIAIAWDESLRE 220 (322)
T ss_dssp HHTSCTTTGGGEEEEE-------CCBS---SHHHHHHHHHHHCCCEEESGGGGS
T ss_pred HHHhhhhccCCeeEEE-------CCCC---ChHHHHHHHHhCCCCEEeCCCCCC
Confidence 9999887 655542 2221 356778888888899876555444
No 471
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=88.25 E-value=9.7 Score=33.04 Aligned_cols=122 Identities=11% Similarity=0.055 Sum_probs=75.7
Q ss_pred CCCHHHHHHHHH---HHh-cCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEeccCCChHHH
Q psy4398 110 TADPERALEAAK---KVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFHNEADT 185 (306)
Q Consensus 110 g~~~~~~~~aa~---~~~-~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~ 185 (306)
.++.+++....+ .++ .|+|+|-+-+-.|.. . =|.+...+++++.. +.|+..=... ....+.
T Consensus 66 ~Ys~~E~~~M~~Di~~~~~~GadGvV~G~Lt~dg---------~--iD~~~~~~Li~~a~---~~~vTFHRAf-D~~~d~ 130 (256)
T 1twd_A 66 CYSDGEFAAILEDVRTVRELGFPGLVTGVLDVDG---------N--VDMPRMEKIMAAAG---PLAVTFHRAF-DMCANP 130 (256)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTCSEEEECCBCTTS---------S--BCHHHHHHHHHHHT---TSEEEECGGG-GGCSCH
T ss_pred cCCHHHHHHHHHHHHHHHHcCCCEEEEeeECCCC---------C--cCHHHHHHHHHHhC---CCcEEEECch-hccCCH
Confidence 466777666544 344 399999986655442 1 26777788886654 3454443221 112345
Q ss_pred HHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhC-CCcEEEecCCCCHHHHHHHHHhhh
Q psy4398 186 IALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHL-KIPVIANGGSKEIVDYGGVFSLNC 251 (306)
Q Consensus 186 ~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~-~ipvia~GGI~s~~~~~~~l~~~v 251 (306)
.+..+.|.+.|++.|.-+|... .-...++.++++.+.. ++-|++.|||+ .+++.++++.++
T Consensus 131 ~~ale~L~~lG~~rILTSG~~~----~a~~g~~~L~~Lv~~a~~i~Im~GgGv~-~~Ni~~l~~tGv 192 (256)
T 1twd_A 131 LYTLNNLAELGIARVLTSGQKS----DALQGLSKIMELIAHRDAPIIMAGAGVR-AENLHHFLDAGV 192 (256)
T ss_dssp HHHHHHHHHHTCCEEEECTTSS----STTTTHHHHHHHHTSSSCCEEEEESSCC-TTTHHHHHHHTC
T ss_pred HHHHHHHHHcCCCEEECCCCCC----CHHHHHHHHHHHHHhhCCcEEEecCCcC-HHHHHHHHHcCC
Confidence 5667778888999998665421 1234677888776644 68889999987 456666664444
No 472
>1lt8_A Betaine-homocysteine methyltransferase; homocysteine metabolism, homocysteinemia, zinc, thiol alkyl transfer; HET: CBH CIT; 2.05A {Homo sapiens} SCOP: c.1.26.1 PDB: 1lt7_A* 1umy_A
Probab=88.23 E-value=1.9 Score=40.16 Aligned_cols=111 Identities=15% Similarity=0.194 Sum_probs=64.5
Q ss_pred HHcCCCEEEecceechhhhhhhhhhhcccccccccCCCCCceeeecCCCCCCceEEEec--------CCCHHHHHHHHHH
Q psy4398 51 LDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDGSVVFRTCPREKNKIILQIG--------TADPERALEAAKK 122 (306)
Q Consensus 51 ~~~G~g~~~te~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~ivql~--------g~~~~~~~~aa~~ 122 (306)
.+.|++++.-|++..-.-...... ...+.+.|+++++. |.++ .+++..
T Consensus 149 ~~~GvDlll~ETi~~~~Eakaa~~---------------------a~~~~~lPv~iS~T~~~~G~l~G~~~---~~~~~~ 204 (406)
T 1lt8_A 149 MKKNVDFLIAEYFEHVEEAVWAVE---------------------TLIASGKPVAATMAIGPEGDLHGVPP---GEAAVR 204 (406)
T ss_dssp HHHTCSEEEECCCSCHHHHHHHHH---------------------HHGGGTSCEEEEECCBTTBCTTCCCH---HHHHHH
T ss_pred hhCCCCEEEEcccCCHHHHHHHHH---------------------HHHHhCCcEEEEEEECCCCCcCCCcH---HHHHHH
Confidence 368999999998874321111000 00012346666653 4444 444454
Q ss_pred Hhc-CCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcc-----cccEEEEeccCC--C-------------
Q psy4398 123 VEH-DVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL-----SIPVSCKIRVFH--N------------- 181 (306)
Q Consensus 123 ~~~-g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-----~~pv~vKir~g~--~------------- 181 (306)
+.. ++++|-+||++ .|+.+..+++.+++.. +.|++|.-..+. +
T Consensus 205 l~~~~~~avGvNC~~----------------gP~~~~~~l~~l~~~~~~~g~~~pl~vyPNag~~~~~~~~~~~~~~~~~ 268 (406)
T 1lt8_A 205 LVKAGASIIGVNCHF----------------DPTISLKTVKLMKEGLEAAQLKAHLMSQPLAYHTPDANKQGFIDLPEFP 268 (406)
T ss_dssp HHTTTCSEEEEESSS----------------CHHHHHHHHHHHHHHHHTTTCCCEEEEECCSBCCTTCCTTCGGGSTTTT
T ss_pred hhcCCCCEEEecCCC----------------CHHHHHHHHHHHHHhhhhcCCCccEEEecCCCCCCcCCcccccCCcccc
Confidence 543 89999999864 2556666777776543 678888765421 0
Q ss_pred ----hH-----HHHHHHHHHHHcCCcEEE
Q psy4398 182 ----EA-----DTIALCKRLEACGIIAIG 201 (306)
Q Consensus 182 ----~~-----~~~~~a~~l~~~G~d~i~ 201 (306)
++ +..++++.+.+.|+..|-
T Consensus 269 ~~~~p~~~~~~~~~~~a~~w~~~Ga~iIG 297 (406)
T 1lt8_A 269 FGLEPRVATRWDIQKYAREAYNLGVRYIG 297 (406)
T ss_dssp TSCGGGBCCHHHHHHHHHHHHHHTEEEEC
T ss_pred ccCCHHHHHHHHHHHHHHHHHhCCCeEEE
Confidence 01 356677777777876653
No 473
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=88.18 E-value=1.4 Score=39.19 Aligned_cols=111 Identities=12% Similarity=0.080 Sum_probs=71.6
Q ss_pred cCCCCCCceEEEecCCCHHHHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEE
Q psy4398 96 TCPREKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCK 175 (306)
Q Consensus 96 ~~~~~~~p~ivql~g~~~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vK 175 (306)
.+.+.|.|++-.++-.. +...+++ .+|.+.| |+..+.+.+++. ++. ..++||.+|
T Consensus 83 ~~~e~Glp~~tev~d~~--~v~~l~~----~vd~lkI--------------gA~~~~n~~LLr----~~a-~~gkPVilK 137 (288)
T 3tml_A 83 VKRQLGLPVLTDVHSID--EIEQVAS----VVDVLQT--------------PAFLCRQTDFIH----ACA-RSGKPVNIK 137 (288)
T ss_dssp HHHHHCCCEEEECCSGG--GHHHHHH----HCSEEEE--------------CGGGTTCHHHHH----HHH-TSSSCEEEE
T ss_pred HHHhcCCeEEEEeCCHH--HHHHHHH----hCCEEEE--------------CcccccCHHHHH----HHH-ccCCcEEEe
Confidence 33445667776664322 2222222 2577766 455566777544 443 579999999
Q ss_pred eccCCChHHHHHHHHHHHHcCC------cEEE-EcccCCCCCCCC-CCcHHHHHHHHhhCCCcEEE
Q psy4398 176 IRVFHNEADTIALCKRLEACGI------IAIG-VHGRTKAERPRH-RNRIEMIRTLTQHLKIPVIA 233 (306)
Q Consensus 176 ir~g~~~~~~~~~a~~l~~~G~------d~i~-v~~~~~~~~~~~-p~~~~~v~~i~~~~~ipvia 233 (306)
-....+.+++...++.+.+.|. +-|. +|..+.- .+.. ..++..+..+++ +++||+.
T Consensus 138 ~G~~~t~~e~~~ave~i~~~Gn~~~~~~~~i~L~erg~~y-~~~~~~vdl~~i~~lk~-~~~pV~~ 201 (288)
T 3tml_A 138 KGQFLAPHDMKNVIDKARDAAREAGLSEDRFMACERGVSF-GYNNLVSDMRSLAIMRE-TNAPVVF 201 (288)
T ss_dssp CCTTCCTTHHHHHHHHHHHHHHTTTCCSCCEEEEECCEEC-SSSCEECCHHHHHHGGG-GSSCEEE
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCccCCCCcEEEEeCCCCC-CCCcCcCCHHHHHHHHh-cCCcEEE
Confidence 9976677888888999988886 5454 5554422 2322 147889999988 8999987
No 474
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=88.15 E-value=2.6 Score=38.06 Aligned_cols=141 Identities=10% Similarity=0.012 Sum_probs=83.2
Q ss_pred EEecC-CCHHHHHHHHHHHhc-CCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEecc--CCC
Q psy4398 106 LQIGT-ADPERALEAAKKVEH-DVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRV--FHN 181 (306)
Q Consensus 106 vql~g-~~~~~~~~aa~~~~~-g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~--g~~ 181 (306)
++.+. .+.+++..+.+.+.. |.+.|.+-++... .......+.+..+..+.+.++++..++. +..+.+-+-. -.+
T Consensus 72 i~~l~r~~~~~i~~a~~al~~ag~~~v~i~~s~Sd-~~~~~~l~~s~~e~l~~~~~~v~~a~~~-g~~v~f~~~d~~~~~ 149 (325)
T 3eeg_A 72 ICALTRAKEADINIAGEALRFAKRSRIHTGIGSSD-IHIEHKLRSTRENILEMAVAAVKQAKKV-VHEVEFFCEDAGRAD 149 (325)
T ss_dssp EEEECCSCHHHHHHHHHHHTTCSSEEEEEEEECSH-HHHC----CCCTTGGGTTHHHHHHHHTT-SSEEEEEEETGGGSC
T ss_pred EEEeecCCHHHHHHHHHhhcccCCCEEEEEecccH-HHHHHHhCCCHHHHHHHHHHHHHHHHHC-CCEEEEEccccccch
Confidence 44333 456677666665554 8888877555321 2223344556666677788888887765 4444333221 146
Q ss_pred hHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCC-cHHHHHHHHhhCC----CcEEEecCCC---CHHHHHHHHHhhh
Q psy4398 182 EADTIALCKRLEACGIIAIGVHGRTKAERPRHRN-RIEMIRTLTQHLK----IPVIANGGSK---EIVDYGGVFSLNC 251 (306)
Q Consensus 182 ~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~-~~~~v~~i~~~~~----ipvia~GGI~---s~~~~~~~l~~~v 251 (306)
++...++++.+.++|++.|.+-+.... ..|. -.++++.+++.++ +||-.-.==+ -......++++|+
T Consensus 150 ~~~~~~~~~~~~~~G~~~i~l~DT~G~---~~P~~v~~lv~~l~~~~~~~~~~~i~~H~Hnd~GlA~AN~laA~~aGa 224 (325)
T 3eeg_A 150 QAFLARMVEAVIEAGADVVNIPDTTGY---MLPWQYGERIKYLMDNVSNIDKAILSAHCHNDLGLATANSLAALQNGA 224 (325)
T ss_dssp HHHHHHHHHHHHHHTCSEEECCBSSSC---CCHHHHHHHHHHHHHHCSCGGGSEEEECBCCTTSCHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhcCCCEEEecCccCC---cCHHHHHHHHHHHHHhCCCCCceEEEEEeCCCCCHHHHHHHHHHHhCC
Confidence 677899999999999999988654322 1232 3467788888885 6765543210 1444555556655
No 475
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=88.15 E-value=1.2 Score=39.61 Aligned_cols=112 Identities=13% Similarity=0.137 Sum_probs=0.0
Q ss_pred HHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEeccCC--------ChHHHHH
Q psy4398 116 ALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFH--------NEADTIA 187 (306)
Q Consensus 116 ~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~--------~~~~~~~ 187 (306)
...+-+.++.|+|.|.+ +.+.+........+.+..+..+.+.+.++.+++. +..+.+-+.... +.+...+
T Consensus 83 ~~~i~~a~~ag~~~v~i-~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~-G~~v~~~l~~~~~~~~~~~~~~~~~~~ 160 (298)
T 2cw6_A 83 LKGFEAAVAAGAKEVVI-FGAASELFTKKNINCSIEESFQRFDAILKAAQSA-NISVRGYVSCALGCPYEGKISPAKVAE 160 (298)
T ss_dssp HHHHHHHHHTTCSEEEE-EEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHT-TCEEEEEEETTTCBTTTBSCCHHHHHH
T ss_pred HHhHHHHHHCCCCEEEE-EecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHC-CCeEEEEEEEEeeCCcCCCCCHHHHHH
Q ss_pred HHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhC-CCcE
Q psy4398 188 LCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHL-KIPV 231 (306)
Q Consensus 188 ~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~-~ipv 231 (306)
+++.+.+.|++.|.+.+......+.. ..++++.+++.+ ++|+
T Consensus 161 ~~~~~~~~Ga~~i~l~DT~G~~~P~~--~~~lv~~l~~~~~~~~i 203 (298)
T 2cw6_A 161 VTKKFYSMGCYEISLGDTIGVGTPGI--MKDMLSAVMQEVPLAAL 203 (298)
T ss_dssp HHHHHHHTTCSEEEEEETTSCCCHHH--HHHHHHHHHHHSCGGGE
T ss_pred HHHHHHHcCCCEEEecCCCCCcCHHH--HHHHHHHHHHhCCCCeE
No 476
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=88.13 E-value=1.2 Score=39.33 Aligned_cols=67 Identities=21% Similarity=0.200 Sum_probs=52.0
Q ss_pred HHHHHHHHHHcCCcEEEEccc-----CCCCCCCCCCcHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhhh
Q psy4398 185 TIALCKRLEACGIIAIGVHGR-----TKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNC 251 (306)
Q Consensus 185 ~~~~a~~l~~~G~d~i~v~~~-----~~~~~~~~p~~~~~v~~i~~~~~ipvia~GGI~s~~~~~~~l~~~v 251 (306)
..+.|+.+|++|+.+|.+--+ ...++-..-.+.+.+++|++++++||++-=-|....+++.+.+.|+
T Consensus 20 ~~eqa~iae~aGa~av~~l~~~p~d~r~~gGv~Rm~dp~~I~~I~~aVsIPVm~k~righ~~EAqilea~Ga 91 (291)
T 3o07_A 20 TPEQAKIAEKSGACAVMALESIPADMRKSGKVCRMSDPKMIKDIMNSVSIPVMAKVRIGHFVEAQIIEALEV 91 (291)
T ss_dssp SHHHHHHHHHHTCSEEEECSSCHHHHHTTTCCCCCCCHHHHHHHHTTCSSCEEEEEETTCHHHHHHHHHTTC
T ss_pred CHHHHHHHHHhCchhhhhccCCCchhhhcCCccccCCHHHHHHHHHhCCCCeEEEEecCcHHHHHHHHHcCC
Confidence 468899999999999987422 2333333345779999999999999999988888888887777665
No 477
>3tqp_A Enolase; energy metabolism, lyase; 2.20A {Coxiella burnetii}
Probab=87.99 E-value=3.5 Score=38.73 Aligned_cols=90 Identities=13% Similarity=0.013 Sum_probs=61.8
Q ss_pred CChHHHHHHHHHHHhc---cc--ccEEEEe-----------c---cCCChHHHHHHHHH-HHHcCCcEEEEcccCCCCCC
Q psy4398 152 STPDIACNILTTLISN---LS--IPVSCKI-----------R---VFHNEADTIALCKR-LEACGIIAIGVHGRTKAERP 211 (306)
Q Consensus 152 ~~~~~~~eiv~~v~~~---~~--~pv~vKi-----------r---~g~~~~~~~~~a~~-l~~~G~d~i~v~~~~~~~~~ 211 (306)
++.+.+.-++++++++ ++ +.+.+-. . .+|+.++++++++. +++.++..|- ++.
T Consensus 216 ~~~e~l~~i~~Air~agy~~G~dv~l~vD~aase~~~~g~Y~l~~~~~t~~eai~~~~~ll~~y~i~~IE-------dPl 288 (428)
T 3tqp_A 216 NNEAAFELILEAIEDANYVPGKDIYLALDAASSELYQNGRYDFENNQLTSEEMIDRLTEWTKKYPVISIE-------DGL 288 (428)
T ss_dssp SHHHHHHHHHHHHHHTTCCBTTTBEEEEECCGGGSEETTEECCSSSCBCHHHHHHHHHHHHHHSCEEEEE-------CCS
T ss_pred cHHHHHHHHHHHHHHhhcccCCceEEEEecchhhhccCCceeccccccCHHHHHHHHHHHHhhcccceEe-------CCC
Confidence 3445556668999988 63 4444443 1 24788889999997 8888865542 222
Q ss_pred CCCCcHHHHHHHHhhCCCcEEEecC---CCCHHHHHHHHHh
Q psy4398 212 RHRNRIEMIRTLTQHLKIPVIANGG---SKEIVDYGGVFSL 249 (306)
Q Consensus 212 ~~p~~~~~v~~i~~~~~ipvia~GG---I~s~~~~~~~l~~ 249 (306)
.+.+|+..+++++.++.||-.+|. ++++++++++++.
T Consensus 289 -~~dD~eg~~~L~~~~~~pI~ivGDel~vt~~~~~~~~i~~ 328 (428)
T 3tqp_A 289 -SENDWAGWKLLTERLENKVQLVGDDIFVTNPDILEKGIKK 328 (428)
T ss_dssp -CTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHT
T ss_pred -CcccHHHHHHHHHhcCCCcceeccccccCCHHHHHHHHHh
Confidence 245899999999998766644555 4589999988875
No 478
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=87.99 E-value=2.2 Score=38.11 Aligned_cols=82 Identities=18% Similarity=0.240 Sum_probs=55.1
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCC-CCcHHHHHHHHhhC--CCcEEEecCCCCHHHHHHHHHh----hh-
Q psy4398 180 HNEADTIALCKRLEACGIIAIGVHGRTKAERPRH-RNRIEMIRTLTQHL--KIPVIANGGSKEIVDYGGVFSL----NC- 251 (306)
Q Consensus 180 ~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~-p~~~~~v~~i~~~~--~ipvia~GGI~s~~~~~~~l~~----~v- 251 (306)
.|.+...++++.+.+.|+++|.+.|.+.+..... ....++++.+.+.+ ++|||+.-|-.+.+++.+..+. |+
T Consensus 33 iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gad 112 (304)
T 3l21_A 33 LDTATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAGTYDTAHSIRLAKACAAEGAH 112 (304)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHHTCS
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCC
Confidence 5778899999999999999999988776543322 12345666666665 6899987665666665554443 32
Q ss_pred --hhccccCCCC
Q psy4398 252 --AFLRNHYPVE 261 (306)
Q Consensus 252 --~vGrall~~p 261 (306)
++-...|..|
T Consensus 113 avlv~~P~y~~~ 124 (304)
T 3l21_A 113 GLLVVTPYYSKP 124 (304)
T ss_dssp EEEEECCCSSCC
T ss_pred EEEECCCCCCCC
Confidence 5555555544
No 479
>3chv_A Prokaryotic domain of unknown function (DUF849) W barrel fold; TIM barrel fold, structural genomics, joint center for struc genomics; HET: MSE; 1.45A {Silicibacter pomeroyi dss-3} PDB: 3fa5_A
Probab=87.88 E-value=0.48 Score=42.08 Aligned_cols=103 Identities=17% Similarity=0.206 Sum_probs=61.9
Q ss_pred ChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCC--cHHHHHHHHhhC-CCcEEEe-cC-CCCHHHHHHHHHh---h--
Q psy4398 181 NEADTIALCKRLEACGIIAIGVHGRTKAERPRHRN--RIEMIRTLTQHL-KIPVIAN-GG-SKEIVDYGGVFSL---N-- 250 (306)
Q Consensus 181 ~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~--~~~~v~~i~~~~-~ipvia~-GG-I~s~~~~~~~l~~---~-- 250 (306)
++++..+-|..+.++|+..+|+|.|..+++.+..+ .-+.+..|+++. ++.|-.+ || ..+.++--..++. .
T Consensus 32 TpeEia~~A~~~~~AGAaivHlH~Rd~~G~ps~d~~~~~e~~~~IR~~~pd~ii~~TTgg~~~~~eeR~~~~~~~Pe~aS 111 (284)
T 3chv_A 32 TVSEQVESTQEAFEAGAAIAHCHVRNDDGTPSSDPDRFARLTEGLHTHCPGMIVQFSTGGRSGAGQARGGMLPLKPDMAS 111 (284)
T ss_dssp SHHHHHHHHHHHHHHTCCEEEECEECTTSCEECCHHHHHHHHHHHHHHSTTCEEEECCCTTTCCGGGGGTTGGGCCSEEE
T ss_pred CHHHHHHHHHHHHHcCCcEEEeeecCCCCCcCCCHHHHHHHHHHHHHhCCCeEEEeCCCCCCCCHHHHHHhhhcCCCEEE
Confidence 56788888999999999999999998876554322 235667888876 6655444 33 2333322122211 1
Q ss_pred hhhccccCC-----CCCchHHHHHHHHHhcCCC--CCcce
Q psy4398 251 CAFLRNHYP-----VEKLPKTILYAHCKYKRFE--VPKYE 283 (306)
Q Consensus 251 v~vGrall~-----~p~~~~~~l~~~~~~~g~~--~~~~~ 283 (306)
+-+|+-.+. |+.-.-.++-++|.++|+. +-||.
T Consensus 112 l~~Gs~Nf~~~v~~n~~~~~~~~~~~~~e~Gv~pE~e~fd 151 (284)
T 3chv_A 112 LSVGSNNFPSRVYENPPDLVDWLAAQMRSYRVTPEIEAFD 151 (284)
T ss_dssp ECCSCEECSSSEECCCHHHHHHHHHHHHHHTCEEEEEESS
T ss_pred ecCcccccCCccccCCHHHHHHHHHHHHHcCCEEEEEEEC
Confidence 144444333 3211123788889999987 44443
No 480
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=87.85 E-value=6.7 Score=37.17 Aligned_cols=89 Identities=11% Similarity=0.113 Sum_probs=61.1
Q ss_pred CCCceEEEec-----CCCHHHHHHHHHHHhc-CCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEE
Q psy4398 100 EKNKIILQIG-----TADPERALEAAKKVEH-DVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVS 173 (306)
Q Consensus 100 ~~~p~ivql~-----g~~~~~~~~aa~~~~~-g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~ 173 (306)
.|..+.+.++ -.+++.+.+.++.+.+ |+|.|-|- |-.|. -.|..+.++++++++.+++||.
T Consensus 139 ~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~I~l~----------DT~G~---~~P~~v~~lv~~l~~~~~~~i~ 205 (464)
T 2nx9_A 139 MGAHAQGTLCYTTSPVHNLQTWVDVAQQLAELGVDSIALK----------DMAGI---LTPYAAEELVSTLKKQVDVELH 205 (464)
T ss_dssp TTCEEEEEEECCCCTTCCHHHHHHHHHHHHHTTCSEEEEE----------ETTSC---CCHHHHHHHHHHHHHHCCSCEE
T ss_pred CCCEEEEEEEeeeCCCCCHHHHHHHHHHHHHCCCCEEEEc----------CCCCC---cCHHHHHHHHHHHHHhcCCeEE
Confidence 4555544452 2378889999987765 99987772 33443 3699999999999998877766
Q ss_pred EEeccCCChHHHHHHHHHHHHcCCcEEEEc
Q psy4398 174 CKIRVFHNEADTIALCKRLEACGIIAIGVH 203 (306)
Q Consensus 174 vKir~g~~~~~~~~~a~~l~~~G~d~i~v~ 203 (306)
+=.- .+..-...-+-++.++||+.|..+
T Consensus 206 ~H~H--nd~GlAvAN~laAv~AGa~~VD~t 233 (464)
T 2nx9_A 206 LHCH--STAGLADMTLLKAIEAGVDRVDTA 233 (464)
T ss_dssp EEEC--CTTSCHHHHHHHHHHTTCSEEEEB
T ss_pred EEEC--CCCChHHHHHHHHHHhCCCEEEEe
Confidence 6655 333334444445567999999865
No 481
>3e49_A Uncharacterized protein DUF849 with A TIM barrel; structural genomics, joint center for structural genomics; HET: MSE; 1.75A {Burkholderia xenovorans LB400}
Probab=87.81 E-value=0.66 Score=41.73 Aligned_cols=57 Identities=18% Similarity=0.283 Sum_probs=40.8
Q ss_pred ChHHHHHHHHHHHHcCCcEEEEcccCC-CCCCCCCC--cHHHHHHHHhhCCCcEE-EecCC
Q psy4398 181 NEADTIALCKRLEACGIIAIGVHGRTK-AERPRHRN--RIEMIRTLTQHLKIPVI-ANGGS 237 (306)
Q Consensus 181 ~~~~~~~~a~~l~~~G~d~i~v~~~~~-~~~~~~p~--~~~~v~~i~~~~~ipvi-a~GGI 237 (306)
++++..+-|..+.++||..+|+|.|.. ++..+..+ .-+.+..|++++++.|. .+||.
T Consensus 30 TpeEia~~A~~~~~AGAaivHlHvRdp~dG~ps~d~~~~~e~~~~IR~~~d~iI~~TTgg~ 90 (311)
T 3e49_A 30 TPDEVAQASIGAAEAGAAVIHLHARDPRDGRPTQDPAAFAEFLPRIKSNTDAVINLTTGGS 90 (311)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHTTHHHHHHHHCCCEEEECSCSC
T ss_pred CHHHHHHHHHHHHHcCCcEEEEeecCCCCCCcCCCHHHHHHHHHHHHHhCCcEEEECCCCC
Confidence 567888889999999999999999984 56554322 22567888888866443 33543
No 482
>1m5w_A Pyridoxal phosphate biosynthetic protein PDXJ; TIM barrel, protein-substrate complex, multi-binding states; HET: DXP; 1.96A {Escherichia coli} SCOP: c.1.24.1 PDB: 1ho1_A 1ho4_A* 1ixn_A* 1ixo_A* 1ixp_A 1ixq_A 3f4n_A*
Probab=87.63 E-value=3.1 Score=35.75 Aligned_cols=95 Identities=19% Similarity=0.162 Sum_probs=60.1
Q ss_pred CCccccccCChHHHHHHHHHHHhcccccEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCC---CcHH--
Q psy4398 144 GGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHR---NRIE-- 218 (306)
Q Consensus 144 ~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p---~~~~-- 218 (306)
...|-.+..+.+.+.++++.+++. ++.|++-+- ++. +-.+...+.|+|.|-+|-..-...+... ..++
T Consensus 103 TegGldv~~~~~~l~~~i~~L~~~-GIrVSLFID--pd~----~qi~aA~~~GA~~IELhTG~Ya~a~~~~~~~~el~~i 175 (243)
T 1m5w_A 103 TEGGLDVAGQRDKMRDACKRLADA-GIQVSLFID--ADE----EQIKAAAEVGAPFIEIHTGCYADAKTDAEQAQELARI 175 (243)
T ss_dssp CCSCCCSGGGHHHHHHHHHHHHHT-TCEEEEEEC--SCH----HHHHHHHHTTCSEEEEECHHHHHCCSHHHHHHHHHHH
T ss_pred CCcchhHHhhHHHHHHHHHHHHHC-CCEEEEEeC--CCH----HHHHHHHHhCcCEEEEechhhhcCCCchhHHHHHHHH
Confidence 445667778899999999999774 888888877 553 4455667899999999754321111100 0112
Q ss_pred -HHHHHHhhCCCcEEEecCCCCHHHHHHH
Q psy4398 219 -MIRTLTQHLKIPVIANGGSKEIVDYGGV 246 (306)
Q Consensus 219 -~v~~i~~~~~ipvia~GGI~s~~~~~~~ 246 (306)
...+.....++-|=+.-|++ .++...+
T Consensus 176 ~~aa~~A~~lGL~VnAGHgL~-y~Nv~~i 203 (243)
T 1m5w_A 176 AKAATFAASLGLKVNAGHGLT-YHNVKAI 203 (243)
T ss_dssp HHHHHHHHHTTCEEEEESSCC-TTTHHHH
T ss_pred HHHHHHHHHcCCEEecCCCCC-HHHHHHH
Confidence 22334445588888888865 4444444
No 483
>2ocz_A 3-dehydroquinate dehydratase; structural genomics, DH streptococcus pyogenes, dehydroshikimate, PSI-2, protein ST initiative; HET: MSE; 1.85A {Streptococcus pyogenes serotype M1}
Probab=87.61 E-value=1.6 Score=37.35 Aligned_cols=86 Identities=10% Similarity=0.036 Sum_probs=58.0
Q ss_pred ceEEEecCCCHHHHHHHHHHHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhccc-ccEEEEecc---
Q psy4398 103 KIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLS-IPVSCKIRV--- 178 (306)
Q Consensus 103 p~ivql~g~~~~~~~~aa~~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~-~pv~vKir~--- 178 (306)
.+++-|.+.+.++..+.++.+..++|.||+ |-|.+... +.+.+.+.++ ..+. .|+.+=+|.
T Consensus 5 ~Icvpi~~~t~~e~~~~~~~~~~~~D~vEl---------RvD~l~~~---~~~~v~~~l~---~~~~~~PiI~T~R~~~e 69 (231)
T 2ocz_A 5 RIVAPVMPRHFDEAQAIDISKYEDVNLIEW---------RADFLPKD---EIVAVAPAIF---EKFAGKEIIFTLRTVQE 69 (231)
T ss_dssp EEEEEECCSSHHHHHTCCGGGGTTCSEEEE---------EGGGSCGG---GHHHHHHHHH---HHTTTSEEEEECCBGGG
T ss_pred EEEEEeCCCCHHHHHHHHHHhccCCCEEEE---------Eecccccc---CHHHHHHHHH---HHcCCCcEEEEEeeccc
Confidence 578889899988877666666669999999 44433211 1334444443 3233 899988885
Q ss_pred C----CChHHHHHHHHHHHHcC-CcEEEEc
Q psy4398 179 F----HNEADTIALCKRLEACG-IIAIGVH 203 (306)
Q Consensus 179 g----~~~~~~~~~a~~l~~~G-~d~i~v~ 203 (306)
| .+.++..++.+.+.+.| +|+|.|.
T Consensus 70 GG~~~~~~~~~~~ll~~~~~~g~~d~iDvE 99 (231)
T 2ocz_A 70 GGNITLSSQEYVDIIKEINAIYNPDYIDFE 99 (231)
T ss_dssp TCSBCCCHHHHHHHHHHHHHHHCCSEEEEE
T ss_pred CCCCCCCHHHHHHHHHHHHHcCCCCEEEEE
Confidence 2 23456778888888888 9999984
No 484
>2y7e_A 3-keto-5-aminohexanoate cleavage enzyme; lyase, aldolase; 1.28A {Candidatus cloacamonas acidaminovoransorganism_taxid} PDB: 2y7d_A 2y7f_A* 2y7g_A
Probab=87.56 E-value=0.68 Score=41.09 Aligned_cols=99 Identities=15% Similarity=0.059 Sum_probs=61.4
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCC--cHHHHHHHHhhC-CCcEEEecCCC---CHHHHHHHHHh---h
Q psy4398 180 HNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRN--RIEMIRTLTQHL-KIPVIANGGSK---EIVDYGGVFSL---N 250 (306)
Q Consensus 180 ~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~--~~~~v~~i~~~~-~ipvia~GGI~---s~~~~~~~l~~---~ 250 (306)
.++++..+-|..+.++||..+|+|.|..+++.+..+ .-+.+..|+++. ++.|-.+.|.. +.++--..++. .
T Consensus 31 vTpeEia~~A~~a~~AGAaivHlHvRd~~G~ps~d~~~~~e~~~~IR~~~pd~ii~~TTg~~~~~~~eeR~~~~~~~Pe~ 110 (282)
T 2y7e_A 31 ITPEEQAKEAKACFEAGARVIHLHIREDDGRPSQRLDRFQEAISAIREVVPEIIIQISTGGAVGESFDKRLAPLALKPEM 110 (282)
T ss_dssp CSHHHHHHHHHHHHHHTEEEEEECEECTTSCEECCHHHHHHHHHHHHHHCTTSEEEECSSCSTTCCHHHHHGGGGGCCSE
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEeecCCCCCcCCCHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCHHHHHHHhhcCCCE
Confidence 356788899999999999999999998655554322 235667888875 66665554433 34432222221 1
Q ss_pred --hhhccccCC-----CCCchHHHHHHHHHhcCCC
Q psy4398 251 --CAFLRNHYP-----VEKLPKTILYAHCKYKRFE 278 (306)
Q Consensus 251 --v~vGrall~-----~p~~~~~~l~~~~~~~g~~ 278 (306)
+.+|+-.+. |+.-.-.++-.+|.++|+.
T Consensus 111 asl~~gs~Nf~~~v~~n~~~~~~~~~~~~~e~Gv~ 145 (282)
T 2y7e_A 111 ATLNAGTLNFGDDIFINHPADIIRLAEAFKQYNVV 145 (282)
T ss_dssp EEEECCCEEETTEEECCCHHHHHHHHHHHHHTTCE
T ss_pred EEecccccccccccccCCHHHHHHHHHHHHHcCCe
Confidence 144554333 3311223788899999987
No 485
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=87.49 E-value=1.8 Score=38.57 Aligned_cols=77 Identities=17% Similarity=0.132 Sum_probs=43.2
Q ss_pred HHHHHHHHH-HHhcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEeccCCChHHHHHHHHH
Q psy4398 113 PERALEAAK-KVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFHNEADTIALCKR 191 (306)
Q Consensus 113 ~~~~~~aa~-~~~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~a~~ 191 (306)
.+...+.|+ .+++|+|.|+|+.-+..+... .-+..+..+.+..+++++++. ++||++-..- .+.+++
T Consensus 45 ~~~a~~~a~~~v~~GAdiIDIGgeSTrPga~----~v~~~eE~~Rv~pvi~~l~~~-~vpiSIDT~~-------~~Va~a 112 (294)
T 2y5s_A 45 RDDALRRAERMIAEGADLLDIGGESTRPGAP----PVPLDEELARVIPLVEALRPL-NVPLSIDTYK-------PAVMRA 112 (294)
T ss_dssp TTHHHHHHHHHHHTTCSEEEEESSCCSTTCC----CCCHHHHHHHHHHHHHHHGGG-CSCEEEECCC-------HHHHHH
T ss_pred HHHHHHHHHHHHHCCCCEEEECCCcCCCCCC----CCCHHHHHHHHHHHHHHHhhC-CCeEEEECCC-------HHHHHH
Confidence 344444444 456799999999855222100 011123345566777777765 8898886551 234444
Q ss_pred HHHcCCcEEE
Q psy4398 192 LEACGIIAIG 201 (306)
Q Consensus 192 l~~~G~d~i~ 201 (306)
..++|++.|.
T Consensus 113 Al~aGa~iIN 122 (294)
T 2y5s_A 113 ALAAGADLIN 122 (294)
T ss_dssp HHHHTCSEEE
T ss_pred HHHcCCCEEE
Confidence 4445666654
No 486
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=87.29 E-value=1.9 Score=37.63 Aligned_cols=82 Identities=17% Similarity=0.205 Sum_probs=54.1
Q ss_pred CCCCceEEEecC--------CCHHHHHHHHHHHhc-CCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhccc
Q psy4398 99 REKNKIILQIGT--------ADPERALEAAKKVEH-DVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLS 169 (306)
Q Consensus 99 ~~~~p~ivql~g--------~~~~~~~~aa~~~~~-g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~ 169 (306)
+.+.|+|+...- .+++...++++.+.+ |+|.|-... | | +++. ++.+++.++
T Consensus 136 ~~~~~vIi~~~~~G~~~~~~~s~~~i~~a~~~a~~~GAD~vkt~~--~---------~-----~~e~----~~~~~~~~~ 195 (263)
T 1w8s_A 136 KFDLPLVVESFPRGGKVVNETAPEIVAYAARIALELGADAMKIKY--T---------G-----DPKT----FSWAVKVAG 195 (263)
T ss_dssp HHTCCEEEEECCCSTTCCCTTCHHHHHHHHHHHHHHTCSEEEEEC--C---------S-----SHHH----HHHHHHHTT
T ss_pred HcCCeEEEEeeCCCCccccCCCHHHHHHHHHHHHHcCCCEEEEcC--C---------C-----CHHH----HHHHHHhCC
Confidence 346777776421 156777777777765 999988863 2 1 3344 344444444
Q ss_pred c-cEEEEeccCC---ChHHHHHHHHHHHHcCCcEEEE
Q psy4398 170 I-PVSCKIRVFH---NEADTIALCKRLEACGIIAIGV 202 (306)
Q Consensus 170 ~-pv~vKir~g~---~~~~~~~~a~~l~~~G~d~i~v 202 (306)
. | ||...|. +.++..+.++.+.++|++++.+
T Consensus 196 ~~p--V~asGGi~~~~~~~~l~~i~~~~~aGA~Gvsv 230 (263)
T 1w8s_A 196 KVP--VLMSGGPKTKTEEDFLKQVEGVLEAGALGIAV 230 (263)
T ss_dssp TSC--EEEECCSCCSSHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCe--EEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEE
Confidence 4 5 7777775 4567888888888899998875
No 487
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=87.23 E-value=2.1 Score=37.88 Aligned_cols=82 Identities=15% Similarity=0.098 Sum_probs=53.8
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCC-CcHHHHHHHHhhC--CCcEEEecCCCCHHHHHHHHHh----hh-
Q psy4398 180 HNEADTIALCKRLEACGIIAIGVHGRTKAERPRHR-NRIEMIRTLTQHL--KIPVIANGGSKEIVDYGGVFSL----NC- 251 (306)
Q Consensus 180 ~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p-~~~~~v~~i~~~~--~ipvia~GGI~s~~~~~~~l~~----~v- 251 (306)
.|.+...++++.+.+.|+++|.+.|.+.+...... ...++++.+.+.+ ++|||+.-|-.+.+++.+..+. |+
T Consensus 18 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gad 97 (289)
T 2yxg_A 18 VDFDGLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAGSNCTEEAIELSVFAEDVGAD 97 (289)
T ss_dssp ECHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSSHHHHHHHHHHHHHHTCS
T ss_pred cCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCC
Confidence 67788999999999999999999887765443221 2345666666665 5899877665565555444332 32
Q ss_pred --hhccccCCCC
Q psy4398 252 --AFLRNHYPVE 261 (306)
Q Consensus 252 --~vGrall~~p 261 (306)
++-.+.|..|
T Consensus 98 avlv~~P~y~~~ 109 (289)
T 2yxg_A 98 AVLSITPYYNKP 109 (289)
T ss_dssp EEEEECCCSSCC
T ss_pred EEEECCCCCCCC
Confidence 5555555444
No 488
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=87.21 E-value=2.6 Score=37.48 Aligned_cols=82 Identities=22% Similarity=0.240 Sum_probs=53.4
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCC-CcHHHHHHHHhhC--CCcEEEecCCCCHHHHHHHHHh----hh-
Q psy4398 180 HNEADTIALCKRLEACGIIAIGVHGRTKAERPRHR-NRIEMIRTLTQHL--KIPVIANGGSKEIVDYGGVFSL----NC- 251 (306)
Q Consensus 180 ~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p-~~~~~v~~i~~~~--~ipvia~GGI~s~~~~~~~l~~----~v- 251 (306)
.|.+...++++.+.+.|+++|.+.|.+.+...... ...++++.+.+.+ ++|||+.-|-.+.+++.+..+. |+
T Consensus 30 iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gad 109 (301)
T 1xky_A 30 IDFAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTGSNNTHASIDLTKKATEVGVD 109 (301)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHTTCS
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCCCCCCHHHHHHHHHHHHhcCCC
Confidence 56777899999999999999999887765443221 1345666666665 6898877665565555444432 32
Q ss_pred --hhccccCCCC
Q psy4398 252 --AFLRNHYPVE 261 (306)
Q Consensus 252 --~vGrall~~p 261 (306)
++-...|..|
T Consensus 110 avlv~~P~y~~~ 121 (301)
T 1xky_A 110 AVMLVAPYYNKP 121 (301)
T ss_dssp EEEEECCCSSCC
T ss_pred EEEEcCCCCCCC
Confidence 5555555444
No 489
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=87.17 E-value=3.7 Score=36.53 Aligned_cols=82 Identities=12% Similarity=0.178 Sum_probs=54.4
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCC-CcHHHHHHHHhhC--CCcEEEecCCCCHHHHHHHHHh----hh-
Q psy4398 180 HNEADTIALCKRLEACGIIAIGVHGRTKAERPRHR-NRIEMIRTLTQHL--KIPVIANGGSKEIVDYGGVFSL----NC- 251 (306)
Q Consensus 180 ~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p-~~~~~v~~i~~~~--~ipvia~GGI~s~~~~~~~l~~----~v- 251 (306)
.|.+...++++.+.+.|+|+|.+.|.+.+...... ...++++.+.+.+ ++|||+.-|-.+.+++.+..+. |+
T Consensus 34 iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~st~~ai~la~~A~~~Gad 113 (304)
T 3cpr_A 34 IDIAAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGVGTNNTRTSVELAEAAASAGAD 113 (304)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHTTCS
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecCCCCCHHHHHHHHHHHHhcCCC
Confidence 57778999999999999999999888766544322 2345666666665 5899877665665555444432 32
Q ss_pred --hhccccCCCC
Q psy4398 252 --AFLRNHYPVE 261 (306)
Q Consensus 252 --~vGrall~~p 261 (306)
++-.+.|..|
T Consensus 114 avlv~~P~y~~~ 125 (304)
T 3cpr_A 114 GLLVVTPYYSKP 125 (304)
T ss_dssp EEEEECCCSSCC
T ss_pred EEEECCCCCCCC
Confidence 5555555444
No 490
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=87.07 E-value=1.7 Score=38.19 Aligned_cols=97 Identities=10% Similarity=0.079 Sum_probs=55.4
Q ss_pred HHHHHHHHHhc-CCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEeccC---------CChHH
Q psy4398 115 RALEAAKKVEH-DVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVF---------HNEAD 184 (306)
Q Consensus 115 ~~~~aa~~~~~-g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g---------~~~~~ 184 (306)
.|.++.+.+++ ||+.|||+-|+ +.-..+.-.++|+.+++. +.|+--.| .++..
T Consensus 111 ~~~~yl~~~k~lGF~~IEISdGt-------------i~l~~~~~~~lI~~a~~~----f~Vl~EvG~K~~~~~~~~~~~~ 173 (276)
T 1u83_A 111 KVNEFHRYCTYFGCEYIEISNGT-------------LPMTNKEKAAYIADFSDE----FLVLSEVGSKDAELASRQSSEE 173 (276)
T ss_dssp CHHHHHHHHHHTTCSEEEECCSS-------------SCCCHHHHHHHHHHHTTT----SEEEEECSCCC------CCSTH
T ss_pred cHHHHHHHHHHcCCCEEEECCCc-------------ccCCHHHHHHHHHHHHhh----cEEeeeccccCccccCCCCHHH
Confidence 45666677765 99999998554 222345556666666544 33333322 24567
Q ss_pred HHHHHHHHHHcCCcEEEEcccCCC--CCCC--CCCcHHHH-HHHHhhCC
Q psy4398 185 TIALCKRLEACGIIAIGVHGRTKA--ERPR--HRNRIEMI-RTLTQHLK 228 (306)
Q Consensus 185 ~~~~a~~l~~~G~d~i~v~~~~~~--~~~~--~p~~~~~v-~~i~~~~~ 228 (306)
.++.++...++||+.|.+-+|... +-+. +....+.+ .+|.+.++
T Consensus 174 ~I~~~~~dLeAGA~~ViiEaRESG~~Gi~~~~g~~r~d~v~~~i~~~l~ 222 (276)
T 1u83_A 174 WLEYIVEDMEAGAEKVITEARESGTGGICSSSGDVRFQIVDDIISSDID 222 (276)
T ss_dssp HHHHHHHHHHHTEEEEEEC------------------CCHHHHHTTTSC
T ss_pred HHHHHHHHHHCCCcEEEEeeeccCCCCccCCCCCCcHHHHHHHHHhhCC
Confidence 899999999999999999887632 2222 22334556 66666653
No 491
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=86.98 E-value=2.7 Score=37.50 Aligned_cols=82 Identities=17% Similarity=0.120 Sum_probs=53.5
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCC-CcHHHHHHHHhhC--CCcEEEecCCCCHHHHHHHHHh----hh-
Q psy4398 180 HNEADTIALCKRLEACGIIAIGVHGRTKAERPRHR-NRIEMIRTLTQHL--KIPVIANGGSKEIVDYGGVFSL----NC- 251 (306)
Q Consensus 180 ~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p-~~~~~v~~i~~~~--~ipvia~GGI~s~~~~~~~l~~----~v- 251 (306)
.|.+...++++.+.+.|+++|.+.|.+.+...... ...++++.+.+.+ ++|||+.-|-.+.+++.+..+. |+
T Consensus 29 iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gad 108 (303)
T 2wkj_A 29 LDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFD 108 (303)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHHTCS
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhCCCC
Confidence 56777899999999999999999887765443221 2345666666665 6899876555555555444332 32
Q ss_pred --hhccccCCCC
Q psy4398 252 --AFLRNHYPVE 261 (306)
Q Consensus 252 --~vGrall~~p 261 (306)
++-...|..|
T Consensus 109 avlv~~P~y~~~ 120 (303)
T 2wkj_A 109 AVSAVTPFYYPF 120 (303)
T ss_dssp EEEEECCCSSCC
T ss_pred EEEecCCCCCCC
Confidence 5555555544
No 492
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=86.95 E-value=1.3 Score=40.24 Aligned_cols=106 Identities=10% Similarity=0.108 Sum_probs=0.0
Q ss_pred HHHHhc-CCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEEEeccCC-------ChHHHHHHHHH
Q psy4398 120 AKKVEH-DVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFH-------NEADTIALCKR 191 (306)
Q Consensus 120 a~~~~~-g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~-------~~~~~~~~a~~ 191 (306)
.+++.+ |.|.|.+ +.+-+....+...+.+..+..+.+.++++.+++. +..+.+-+. . +.+...++++.
T Consensus 102 i~~a~~~g~~~v~i-~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~-G~~v~~~~~--~~~~~~~~~~~~~~~~~~~ 177 (337)
T 3ble_A 102 VDWIKDSGAKVLNL-LTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKS-GLKINVYLE--DWSNGFRNSPDYVKSLVEH 177 (337)
T ss_dssp HHHHHHHTCCEEEE-EEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHT-TCEEEEEEE--THHHHHHHCHHHHHHHHHH
T ss_pred HHHHHHCCCCEEEE-EEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHC-CCEEEEEEE--ECCCCCcCCHHHHHHHHHH
Q ss_pred HHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhC-CCcE
Q psy4398 192 LEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHL-KIPV 231 (306)
Q Consensus 192 l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~-~ipv 231 (306)
+.++|++.|.+-+......+.. -.++++.+++.+ ++||
T Consensus 178 ~~~~Ga~~i~l~DT~G~~~P~~--v~~lv~~l~~~~p~~~i 216 (337)
T 3ble_A 178 LSKEHIERIFLPDTLGVLSPEE--TFQGVDSLIQKYPDIHF 216 (337)
T ss_dssp HHTSCCSEEEEECTTCCCCHHH--HHHHHHHHHHHCTTSCE
T ss_pred HHHcCCCEEEEecCCCCcCHHH--HHHHHHHHHHhcCCCeE
No 493
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=86.84 E-value=2.9 Score=37.10 Aligned_cols=81 Identities=12% Similarity=0.053 Sum_probs=54.0
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCC-CcHHHHHHHHhhC--CCcEEEecCCCCHHHHHHHHHh----h--
Q psy4398 180 HNEADTIALCKRLEACGIIAIGVHGRTKAERPRHR-NRIEMIRTLTQHL--KIPVIANGGSKEIVDYGGVFSL----N-- 250 (306)
Q Consensus 180 ~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p-~~~~~v~~i~~~~--~ipvia~GGI~s~~~~~~~l~~----~-- 250 (306)
.|.+...++++.+.+.|+++|.+.|.+.+...... ...++++.+.+.+ ++|||+.-|-.+.+++.+..+. |
T Consensus 21 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gad 100 (294)
T 3b4u_A 21 VDIDAMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVLVDSIEDAADQSAEALNAGAR 100 (294)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEECCSSHHHHHHHHHHHHHTTCS
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHHHHHHhcCCC
Confidence 56777899999999999999999887765443221 2346677777776 5898876555565555444432 3
Q ss_pred -hhhccccCCC
Q psy4398 251 -CAFLRNHYPV 260 (306)
Q Consensus 251 -v~vGrall~~ 260 (306)
+++-...|..
T Consensus 101 avlv~~P~y~~ 111 (294)
T 3b4u_A 101 NILLAPPSYFK 111 (294)
T ss_dssp EEEECCCCSSC
T ss_pred EEEEcCCcCCC
Confidence 2555555544
No 494
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=86.71 E-value=2.6 Score=37.27 Aligned_cols=69 Identities=20% Similarity=0.176 Sum_probs=48.0
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCC-CcHHHHHHHHhhC--CCcEEEecCCCCHHHHHHHHH
Q psy4398 180 HNEADTIALCKRLEACGIIAIGVHGRTKAERPRHR-NRIEMIRTLTQHL--KIPVIANGGSKEIVDYGGVFS 248 (306)
Q Consensus 180 ~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p-~~~~~v~~i~~~~--~ipvia~GGI~s~~~~~~~l~ 248 (306)
.|.+...++++.+.+.|+++|.+.|.+.+...... ...++++.+.+.+ ++|||+.-|-.+.+++.+..+
T Consensus 19 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~ 90 (292)
T 2ojp_A 19 VCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGTGANATAEAISLTQ 90 (292)
T ss_dssp BCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHH
Confidence 56777899999999999999999887765443221 2345666666665 589987766566665555444
No 495
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=86.70 E-value=2.1 Score=37.97 Aligned_cols=82 Identities=17% Similarity=0.058 Sum_probs=54.0
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCC-CcHHHHHHHHhhC--CCcEEEecCCCCHHHHHHHHHh----hh-
Q psy4398 180 HNEADTIALCKRLEACGIIAIGVHGRTKAERPRHR-NRIEMIRTLTQHL--KIPVIANGGSKEIVDYGGVFSL----NC- 251 (306)
Q Consensus 180 ~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p-~~~~~v~~i~~~~--~ipvia~GGI~s~~~~~~~l~~----~v- 251 (306)
.|.+...++++.+.+.|+++|.+.|.+.+...... ...++++.+.+.+ ++|||+.-|-.+.+++.+..+. |+
T Consensus 18 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gad 97 (294)
T 2ehh_A 18 VDYEALGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTGGNATHEAVHLTAHAKEVGAD 97 (294)
T ss_dssp ECHHHHHHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHTTCS
T ss_pred cCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCC
Confidence 67788999999999999999999887765443221 2345666666665 5899877665565555444432 32
Q ss_pred --hhccccCCCC
Q psy4398 252 --AFLRNHYPVE 261 (306)
Q Consensus 252 --~vGrall~~p 261 (306)
++-...|..|
T Consensus 98 avlv~~P~y~~~ 109 (294)
T 2ehh_A 98 GALVVVPYYNKP 109 (294)
T ss_dssp EEEEECCCSSCC
T ss_pred EEEECCCCCCCC
Confidence 5555555444
No 496
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=86.70 E-value=2 Score=38.31 Aligned_cols=82 Identities=17% Similarity=0.173 Sum_probs=53.8
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCC-CcHHHHHHHHhhC--CCcEEEecCCCCHHHHHHHHHh----hh-
Q psy4398 180 HNEADTIALCKRLEACGIIAIGVHGRTKAERPRHR-NRIEMIRTLTQHL--KIPVIANGGSKEIVDYGGVFSL----NC- 251 (306)
Q Consensus 180 ~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p-~~~~~v~~i~~~~--~ipvia~GGI~s~~~~~~~l~~----~v- 251 (306)
.|.+...++++.+.+.|+++|.+.|.+.+...... ...++++.+.+.+ ++|||+.-|-.+.+++.+..+. |+
T Consensus 30 iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~~st~~ai~la~~A~~~Gad 109 (306)
T 1o5k_A 30 LDLESYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAGTNSTEKTLKLVKQAEKLGAN 109 (306)
T ss_dssp ECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCS
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCCCccHHHHHHHHHHHHhcCCC
Confidence 67788999999999999999999887765433221 2345666666665 5898877665565555444432 32
Q ss_pred --hhccccCCCC
Q psy4398 252 --AFLRNHYPVE 261 (306)
Q Consensus 252 --~vGrall~~p 261 (306)
++-.+.|..|
T Consensus 110 avlv~~P~y~~~ 121 (306)
T 1o5k_A 110 GVLVVTPYYNKP 121 (306)
T ss_dssp EEEEECCCSSCC
T ss_pred EEEECCCCCCCC
Confidence 4555555444
No 497
>3nwr_A A rubisco-like protein; lyase; HET: KCX; 1.50A {Burkholderia fungorum}
Probab=86.70 E-value=4.7 Score=37.81 Aligned_cols=97 Identities=12% Similarity=0.051 Sum_probs=67.5
Q ss_pred CCCCceEEEec----CCCHHHHHHHHHHHhc-CCCEE--EEccCCCccccccCCccccccCChHHHHHHHHHHHhccccc
Q psy4398 99 REKNKIILQIG----TADPERALEAAKKVEH-DVAAI--DINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIP 171 (306)
Q Consensus 99 ~~~~p~ivql~----g~~~~~~~~aa~~~~~-g~d~v--eln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~p 171 (306)
..+.|++..+. |-+++++++++..+.. |.|.| |=|++++.- ..+.++...+.+.+++..+.++..
T Consensus 158 ~~~RPl~gtiiKPklGLs~~~~a~~~ye~~~GGlDfiKDDE~~~~q~f--------~p~~eRv~~v~eai~rA~~eTGe~ 229 (432)
T 3nwr_A 158 VKDRPMIGTIIKPNVGLSAAETAALVRELCEAGVDFIKDDEVCANPAH--------APLAERVRAVMSEVRRYRERSGRP 229 (432)
T ss_dssp CCSSCEEEEECSSSSCCCHHHHHHHHHHHHHHTCSEEECCTTCSSCTT--------SCHHHHHHHHHHHHHHHHHHHSCC
T ss_pred CCCCceEEEeeccccCCCHHHHHHHHHHHHhcCCceeECCCCCCCCCc--------ccHHHHHHHHHHHHHHHHHHhCCc
Confidence 36789998875 6789999999887765 88998 335553221 123455667777777777777654
Q ss_pred EEEEeccCCChHHHHHHHHHHHHcCCcEEEEc
Q psy4398 172 VSCKIRVFHNEADTIALCKRLEACGIIAIGVH 203 (306)
Q Consensus 172 v~vKir~g~~~~~~~~~a~~l~~~G~d~i~v~ 203 (306)
...-..+..+.++..+-++.+.+.|++++-+.
T Consensus 230 k~y~~NiT~~~~em~~Ra~~a~e~G~~~~mvd 261 (432)
T 3nwr_A 230 VMVAFNITDDLDAMRRHAELVEREGGSCVMAS 261 (432)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred ceEEeecCCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 33333332577888888999999999988764
No 498
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=86.69 E-value=14 Score=31.35 Aligned_cols=132 Identities=14% Similarity=0.006 Sum_probs=72.8
Q ss_pred CCceEEEec-CCCHHHHHHHHHHH-hcCCCEEEEccCCCccccccCCccccccCChHHHHHHHHHHHhcccccEEE--Ee
Q psy4398 101 KNKIILQIG-TADPERALEAAKKV-EHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSC--KI 176 (306)
Q Consensus 101 ~~p~ivql~-g~~~~~~~~aa~~~-~~g~d~veln~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~v--Ki 176 (306)
+.++++-+- +..++.-..+++.+ +.|+|.|.+|..+ + .+.+...++.+++. +.-|++ .+
T Consensus 64 g~~v~lD~Kl~DipnTv~~~~~~~~~~gad~vtvh~~~-----------G-----~~~l~~~~~~~~~~-g~~v~vLt~~ 126 (228)
T 3m47_A 64 GCRIIADFKVADIPETNEKICRATFKAGADAIIVHGFP-----------G-----ADSVRACLNVAEEM-GREVFLLTEM 126 (228)
T ss_dssp CCEEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEESTT-----------C-----HHHHHHHHHHHHHH-TCEEEEECCC
T ss_pred CCeEEEEEeecccHhHHHHHHHHHHhCCCCEEEEeccC-----------C-----HHHHHHHHHHHHhc-CCCeEEEEeC
Confidence 446777664 33344444455544 4599999998443 1 23444555555432 223443 33
Q ss_pred cc-CC--C-hHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCcHHHHHHHHhhCC--CcEEEecCCCCH-HHHHHHHHh
Q psy4398 177 RV-FH--N-EADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLK--IPVIANGGSKEI-VDYGGVFSL 249 (306)
Q Consensus 177 r~-g~--~-~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p~~~~~v~~i~~~~~--ipvia~GGI~s~-~~~~~~l~~ 249 (306)
+. +. . .+-..++++...+.|++++++++. ..+.++++++.++ .++ ..+||+.- .+. ++++.
T Consensus 127 s~~~~~~~~~~~~~~~a~~a~~~G~~GvV~~at----------~~~e~~~ir~~~~~~~~i-v~PGI~~~g~~p-~~~~a 194 (228)
T 3m47_A 127 SHPGAEMFIQGAADEIARMGVDLGVKNYVGPST----------RPERLSRLREIIGQDSFL-ISPGVGAQGGDP-GETLR 194 (228)
T ss_dssp CSGGGGTTHHHHHHHHHHHHHHTTCCEEECCSS----------CHHHHHHHHHHHCSSSEE-EECC----------CGGG
T ss_pred CCccHHHHHHHHHHHHHHHHHHhCCcEEEECCC----------ChHHHHHHHHhcCCCCEE-EecCcCcCCCCH-hHHHc
Confidence 32 11 1 122467888888999999886531 2256678888774 444 67787632 144 56666
Q ss_pred hh---hhccccCCCC
Q psy4398 250 NC---AFLRNHYPVE 261 (306)
Q Consensus 250 ~v---~vGrall~~p 261 (306)
|+ .+||+++..+
T Consensus 195 Gad~iVvGr~I~~a~ 209 (228)
T 3m47_A 195 FADAIIVGRSIYLAD 209 (228)
T ss_dssp TCSEEEECHHHHTSS
T ss_pred CCCEEEECHHHhCCC
Confidence 54 9999998743
No 499
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=86.52 E-value=3 Score=37.02 Aligned_cols=82 Identities=17% Similarity=0.162 Sum_probs=54.5
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCC-CcHHHHHHHHhhC--CCcEEEecCCCCHHHHHHHHHh----hh-
Q psy4398 180 HNEADTIALCKRLEACGIIAIGVHGRTKAERPRHR-NRIEMIRTLTQHL--KIPVIANGGSKEIVDYGGVFSL----NC- 251 (306)
Q Consensus 180 ~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~p-~~~~~v~~i~~~~--~ipvia~GGI~s~~~~~~~l~~----~v- 251 (306)
.|.+...++++.+.+.|+++|.+.|.+.+...... ...++++.+.+.+ ++|||+.-|-.+.+++.+..+. |+
T Consensus 25 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gad 104 (297)
T 3flu_A 25 IHYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGAD 104 (297)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCC
Confidence 56777899999999999999999887765433221 2345666666665 6899887665666665544433 33
Q ss_pred --hhccccCCCC
Q psy4398 252 --AFLRNHYPVE 261 (306)
Q Consensus 252 --~vGrall~~p 261 (306)
++-...|..|
T Consensus 105 avlv~~P~y~~~ 116 (297)
T 3flu_A 105 YTLSVVPYYNKP 116 (297)
T ss_dssp EEEEECCCSSCC
T ss_pred EEEECCCCCCCC
Confidence 5555555544
No 500
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=86.35 E-value=1.9 Score=38.53 Aligned_cols=69 Identities=12% Similarity=0.076 Sum_probs=48.8
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEcccCCCCCCCC-CCcHHHHHHHHhhC--CCcEEEecCCCCHHHHHHHHH
Q psy4398 180 HNEADTIALCKRLEACGIIAIGVHGRTKAERPRH-RNRIEMIRTLTQHL--KIPVIANGGSKEIVDYGGVFS 248 (306)
Q Consensus 180 ~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~-p~~~~~v~~i~~~~--~ipvia~GGI~s~~~~~~~l~ 248 (306)
.|.+...++++.+.+.|+++|.+.|.+.+..... ....++++.+.+.+ ++|||+.-|-.+.+++.+..+
T Consensus 32 iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~ 103 (307)
T 3s5o_A 32 VDYGKLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSGCESTQATVEMTV 103 (307)
T ss_dssp BCHHHHHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEECCCSSHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEecCCCCHHHHHHHHH
Confidence 5677789999999999999999988776543322 12346777777776 689887656556555554443
Done!