Your job contains 1 sequence.
>psy4398
MVREGTRLLLVKIFYVLDMANANQANINYSNKIILAPMVRMNTLPFRLLALDYGADLVYS
EELVDHKLVKTERKVNDLLNTIDFVDPLDGSVVFRTCPREKNKIILQIGTADPERALEAA
KKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFH
NEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEI
VDYGGVFSLNCAFLRNHYPVEKLPKTILYAHCKYKRFEVPKYETVQYEKLFRSLVTVNGK
QYTSKF
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy4398
(306 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q9NX74 - symbol:DUS2L "tRNA-dihydrouridine(20) ... 649 5.3e-73 2
RGD|1305612 - symbol:Dus2l "dihydrouridine synthase 2-lik... 637 1.6e-71 2
MGI|MGI:1913619 - symbol:Dus2l "dihydrouridine synthase 2... 638 5.3e-71 2
UNIPROTKB|Q0VC60 - symbol:DUS2L "Uncharacterized protein"... 639 1.8e-70 2
UNIPROTKB|I3LES5 - symbol:DUS2L "Uncharacterized protein"... 636 2.9e-70 2
UNIPROTKB|E2RKU2 - symbol:DUS2L "Uncharacterized protein"... 628 3.3e-69 2
ZFIN|ZDB-GENE-100922-233 - symbol:dus2l "dihydrouridine s... 640 8.7e-69 2
UNIPROTKB|E1C4F6 - symbol:DUS2L "Uncharacterized protein"... 613 1.6e-67 2
FB|FBgn0030554 - symbol:CG1434 species:7227 "Drosophila m... 650 9.7e-64 1
UNIPROTKB|J3QLD5 - symbol:DUS2L "tRNA-dihydrouridine(20) ... 601 1.5e-58 1
UNIPROTKB|E7EUN9 - symbol:DUS2L "tRNA-dihydrouridine(20) ... 281 2.4e-58 3
TAIR|locus:2114713 - symbol:AT3G49640 species:3702 "Arabi... 584 9.6e-57 1
WB|WBGene00013201 - symbol:Y54E5A.6 species:6239 "Caenorh... 507 3.7e-54 2
DICTYBASE|DDB_G0283877 - symbol:dus2l "tRNA-dihydrouridin... 502 4.7e-48 1
UNIPROTKB|I3L4Y9 - symbol:DUS2L "tRNA-dihydrouridine(20) ... 499 9.8e-48 1
POMBASE|SPBC1709.06 - symbol:dus2 "tRNA dihydrouridine sy... 461 1.0e-43 1
SGD|S000005298 - symbol:SMM1 "Dihydrouridine synthase" sp... 442 1.1e-41 1
CGD|CAL0003882 - symbol:SMM1 species:5476 "Candida albica... 438 2.8e-41 1
ASPGD|ASPL0000038251 - symbol:AN2967 species:162425 "Emer... 407 5.5e-38 1
UNIPROTKB|I3L4H0 - symbol:DUS2L "tRNA-dihydrouridine(20) ... 404 1.1e-37 1
UNIPROTKB|H3BM64 - symbol:DUS2L "tRNA-dihydrouridine(20) ... 367 9.5e-34 1
UNIPROTKB|H3BQX4 - symbol:DUS2L "tRNA-dihydrouridine(20) ... 333 3.8e-30 1
TAIR|locus:2155528 - symbol:AT5G67220 species:3702 "Arabi... 317 1.9e-28 1
DICTYBASE|DDB_G0278803 - symbol:dus1l "tRNA-dihydrouridin... 295 4.3e-26 1
UNIPROTKB|I3L1K5 - symbol:DUS2L "tRNA-dihydrouridine(20) ... 281 1.2e-24 1
FB|FBgn0031238 - symbol:CG3645 species:7227 "Drosophila m... 274 2.7e-23 1
DICTYBASE|DDB_G0291360 - symbol:dus4l "tRNA-dihydrouridin... 268 2.9e-23 1
RGD|1311445 - symbol:Dus4l "dihydrouridine synthase 4-lik... 258 3.4e-22 1
UNIPROTKB|D4A0T1 - symbol:Dus4l "Protein Dus4l" species:1... 258 3.4e-22 1
UNIPROTKB|Q3A9L8 - symbol:CHY_2369 "tRNA-dihydrouridine s... 257 4.3e-22 1
TIGR_CMR|CHY_2369 - symbol:CHY_2369 "putative TIM-barrel ... 257 4.3e-22 1
UNIPROTKB|H3BMK6 - symbol:DUS2L "tRNA-dihydrouridine(20) ... 255 7.0e-22 1
UNIPROTKB|I3LP14 - symbol:DUS4L "Uncharacterized protein"... 253 1.1e-21 1
UNIPROTKB|E2RRJ8 - symbol:DUS4L "Uncharacterized protein"... 252 1.5e-21 1
MGI|MGI:1919166 - symbol:Dus4l "dihydrouridine synthase 4... 250 2.4e-21 1
UNIPROTKB|F1NHN2 - symbol:DUS4L "tRNA-dihydrouridine synt... 249 3.0e-21 1
UNIPROTKB|O95620 - symbol:DUS4L "tRNA-dihydrouridine(20a/... 249 3.0e-21 1
UNIPROTKB|P0ABT5 - symbol:dusB "tRNA-dihydrouridine synth... 248 3.9e-21 1
ZFIN|ZDB-GENE-040801-233 - symbol:dus4l "dihydrouridine s... 246 6.3e-21 1
UNIPROTKB|A6QPA8 - symbol:DUS4L "DUS4L protein" species:9... 244 1.0e-20 1
TIGR_CMR|NSE_0373 - symbol:NSE_0373 "putative tRNA-dihydr... 242 1.7e-20 1
UNIPROTKB|Q9KV66 - symbol:dusB "tRNA-dihydrouridine synth... 241 2.1e-20 1
TIGR_CMR|VC_0291 - symbol:VC_0291 "NifR3/Smm1 family prot... 241 2.1e-20 1
SGD|S000004545 - symbol:DUS1 "Dihydrouridine synthase" sp... 240 7.9e-20 1
CGD|CAL0004455 - symbol:orf19.1404 species:5476 "Candida ... 241 9.0e-20 1
UNIPROTKB|Q8EJR8 - symbol:dusB "tRNA-dihydrouridine synth... 234 1.2e-19 1
TIGR_CMR|SO_0394 - symbol:SO_0394 "conserved hypothetical... 234 1.2e-19 1
WB|WBGene00016674 - symbol:C45G9.2 species:6239 "Caenorha... 233 1.5e-19 1
POMBASE|SPBC36B7.04 - symbol:SPBC36B7.04 "tRNA dihydrouri... 233 3.7e-19 1
RGD|708389 - symbol:Pp3111 "PP3111 protein" species:10116... 231 9.1e-19 1
UNIPROTKB|J3QLE4 - symbol:DUS1L "tRNA-dihydrouridine(16/1... 225 1.1e-18 1
UNIPROTKB|J3QQZ0 - symbol:DUS1L "tRNA-dihydrouridine(16/1... 225 1.1e-18 1
MGI|MGI:1915980 - symbol:Dus1l "dihydrouridine synthase 1... 230 1.5e-18 1
UNIPROTKB|Q607L4 - symbol:MCA1745 "tRNA-dihydrouridine sy... 224 1.9e-18 1
CGD|CAL0003746 - symbol:orf19.966 species:5476 "Candida a... 224 2.8e-18 1
UNIPROTKB|I3L0K0 - symbol:DUS2L "tRNA-dihydrouridine(20) ... 220 3.6e-18 1
UNIPROTKB|E2R9L8 - symbol:DUS1L "Uncharacterized protein"... 226 4.2e-18 1
UNIPROTKB|Q6P1R4 - symbol:DUS1L "tRNA-dihydrouridine(16/1... 225 5.3e-18 1
UNIPROTKB|J9NYR0 - symbol:DUS1L "Uncharacterized protein"... 226 6.9e-18 1
UNIPROTKB|E1BH75 - symbol:DUS1L "Uncharacterized protein"... 216 9.5e-18 1
UNIPROTKB|Q81VW4 - symbol:BA_0075 "tRNA-dihydrouridine sy... 222 1.3e-17 1
TIGR_CMR|BA_0075 - symbol:BA_0075 "TIM-barrel protein, pu... 222 1.3e-17 1
UNIPROTKB|Q87VS1 - symbol:dusB "tRNA-dihydrouridine synth... 221 1.9e-17 1
UNIPROTKB|E1C6D2 - symbol:DUS1L "Uncharacterized protein"... 222 5.8e-17 1
UNIPROTKB|E1BWI8 - symbol:DUS1L "Uncharacterized protein"... 222 6.1e-17 1
SGD|S000004397 - symbol:DUS4 "Dihydrouridine synthase" sp... 218 1.2e-16 1
TIGR_CMR|SPO_2089 - symbol:SPO_2089 "tRNA-dihydrouridine ... 216 1.3e-16 1
ZFIN|ZDB-GENE-030131-1435 - symbol:dus1l "dihydrouridine ... 220 1.6e-16 1
DICTYBASE|DDB_G0292686 - symbol:dus3l "tRNA-dihydrouridin... 218 6.6e-16 1
TIGR_CMR|APH_0575 - symbol:APH_0575 "putative tRNA-dihydr... 177 1.7e-15 2
UNIPROTKB|G3N340 - symbol:DUS1L "Uncharacterized protein"... 212 2.6e-15 1
TIGR_CMR|ECH_0758 - symbol:ECH_0758 "putative tRNA-dihydr... 203 8.4e-15 1
FB|FBgn0032750 - symbol:CG10495 species:7227 "Drosophila ... 187 3.2e-14 2
WB|WBGene00009452 - symbol:F36A2.2 species:6239 "Caenorha... 202 7.0e-14 1
UNIPROTKB|Q489F6 - symbol:CPS_0550 "tRNA-dihydrouridine s... 190 6.2e-13 1
TIGR_CMR|CPS_0550 - symbol:CPS_0550 "NifR3/Smm1 family pr... 190 6.2e-13 1
TIGR_CMR|GSU_1005 - symbol:GSU_1005 "dihydrouridine synth... 189 6.9e-13 1
POMBASE|SPCC777.15 - symbol:SPCC777.15 "tRNA dihydrouridi... 186 1.7e-12 1
TIGR_CMR|CJE_0118 - symbol:CJE_0118 "tRNA-dihydrouridine ... 185 1.7e-12 1
UNIPROTKB|H3BSF3 - symbol:DUS2L "tRNA-dihydrouridine(20) ... 167 3.5e-12 1
UNIPROTKB|J3QQL9 - symbol:DUS1L "tRNA-dihydrouridine(16/1... 122 1.4e-11 2
UNIPROTKB|G4MUR1 - symbol:MGG_08825 "tRNA-dihydrouridine ... 167 1.1e-09 2
UNIPROTKB|H3BTR3 - symbol:DUS2L "tRNA-dihydrouridine(20) ... 141 2.9e-09 1
UNIPROTKB|H3BRI6 - symbol:DUS2L "tRNA-dihydrouridine(20) ... 137 8.1e-09 1
ASPGD|ASPL0000054271 - symbol:AN0956 species:162425 "Emer... 154 3.7e-08 2
UNIPROTKB|O53835 - symbol:dus "Probable tRNA-dihydrouridi... 151 4.1e-08 1
UNIPROTKB|Q884C6 - symbol:dusC "tRNA-dihydrouridine synth... 146 9.6e-08 1
FB|FBgn0032819 - symbol:CG10463 species:7227 "Drosophila ... 149 1.5e-07 1
UNIPROTKB|Q487W0 - symbol:CPS_0906 "tRNA-dihydrouridine s... 144 1.5e-07 1
TIGR_CMR|CPS_0906 - symbol:CPS_0906 "NifR3/Smm1 family pr... 144 1.5e-07 1
UNIPROTKB|P33371 - symbol:dusC "tRNA-dihydrouridine synth... 143 2.1e-07 1
UNIPROTKB|Q0C5H0 - symbol:dusA "tRNA-dihydrouridine synth... 143 2.3e-07 1
SGD|S000004393 - symbol:DUS3 "Dihydrouridine synthase" sp... 144 6.3e-07 1
ZFIN|ZDB-GENE-040426-1260 - symbol:dus3l "dihydrouridine ... 114 1.2e-06 2
CGD|CAL0005565 - symbol:orf19.1565 species:5476 "Candida ... 138 2.6e-06 1
UNIPROTKB|Q5ALL3 - symbol:DUS3 "tRNA-dihydrouridine(47) s... 138 2.6e-06 1
UNIPROTKB|F1NGP4 - symbol:DUS3L "Uncharacterized protein"... 136 4.6e-06 1
MGI|MGI:2147092 - symbol:Dus3l "dihydrouridine synthase 3... 136 4.7e-06 1
UNIPROTKB|Q607T6 - symbol:MCA1669 "tRNA-dihydrouridine sy... 132 5.2e-06 1
UNIPROTKB|F1SBU5 - symbol:LOC100513458 "Uncharacterized p... 135 6.3e-06 1
WARNING: Descriptions of 26 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|Q9NX74 [details] [associations]
symbol:DUS2L "tRNA-dihydrouridine(20) synthase
[NAD(P)+]-like" species:9606 "Homo sapiens" [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001159 InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF00035 Pfam:PF01207 PROSITE:PS01136
PROSITE:PS50137 SMART:SM00358 InterPro:IPR014720 GO:GO:0005783
GO:GO:0005739 GO:GO:0005737 Gene3D:3.20.20.70 GO:GO:0050660
Gene3D:3.30.160.20 GO:GO:0003725 EMBL:CH471092 eggNOG:COG0042
GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082 EMBL:AB101210
EMBL:AK000406 EMBL:AK290578 EMBL:BC006527 IPI:IPI00015804
RefSeq:NP_001258691.1 RefSeq:NP_060273.1 UniGene:Hs.534460
ProteinModelPortal:Q9NX74 SMR:Q9NX74 IntAct:Q9NX74 STRING:Q9NX74
PhosphoSite:Q9NX74 DMDM:73620832 PaxDb:Q9NX74 PRIDE:Q9NX74
DNASU:54920 Ensembl:ENST00000358896 Ensembl:ENST00000565263
GeneID:54920 KEGG:hsa:54920 UCSC:uc002evi.3 CTD:54920
GeneCards:GC16P068058 HGNC:HGNC:26014 HPA:HPA042560 HPA:HPA043528
MIM:609707 neXtProt:NX_Q9NX74 PharmGKB:PA142671937
HOGENOM:HOG000195580 HOVERGEN:HBG079551 InParanoid:Q9NX74 KO:K05543
OMA:YHNKLIL OrthoDB:EOG4MW85W PhylomeDB:Q9NX74 GenomeRNAi:54920
NextBio:57992 ArrayExpress:Q9NX74 Bgee:Q9NX74 CleanEx:HS_DUS2L
Genevestigator:Q9NX74 Uniprot:Q9NX74
Length = 493
Score = 649 (233.5 bits), Expect = 5.3e-73, Sum P(2) = 5.3e-73
Identities = 127/225 (56%), Positives = 166/225 (73%)
Query: 23 NQANINYSNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTI 82
N ++ Y NK+ILAPMVR+ TLP RLLALDYGAD+VY EEL+D K+++ +R VN++L+T+
Sbjct: 4 NSLSLCYHNKLILAPMVRVGTLPMRLLALDYGADIVYCEELIDLKMIQCKRVVNEVLSTV 63
Query: 83 DFVDPLDGSVVFRTCPREKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSL 142
DFV P D VVFRTC RE+N+++ Q+GT+D ERAL A+ VE+DVA ID+NMGCPKQ+S
Sbjct: 64 DFVAP-DDRVVFRTCEREQNRVVFQMGTSDAERALAVARLVENDVAGIDVNMGCPKQYST 122
Query: 143 TGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGV 202
GGMGAALLS PD IL+TL+ PV+CKIR+ + DT++L KR+E GI AI V
Sbjct: 123 KGGMGAALLSDPDKIEKILSTLVKGTRRPVTCKIRILPSLEDTLSLVKRIERTGIAAIAV 182
Query: 203 HGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKE-IVDYGGV 246
HGR + ERP+H E+I+ + L IPVIANGGS + I Y +
Sbjct: 183 HGRKREERPQHPVSCEVIKAIADTLSIPVIANGGSHDHIQQYSDI 227
Score = 107 (42.7 bits), Expect = 5.3e-73, Sum P(2) = 5.3e-73
Identities = 25/65 (38%), Positives = 35/65 (53%)
Query: 242 DYGGVFSLNCAFLRNHYPVEKLPKTILYAHCKYKRFEVPKYETVQ--YEKLFRSLVTVNG 299
D GV + F R YP + PK L C+ ++ P YETVQ ++LF S+VTV
Sbjct: 348 DTSGVIKMAVKFDRRAYPAQITPKMCLLEWCRREKLAQPVYETVQRPLDRLFSSIVTVAE 407
Query: 300 KQYTS 304
++Y S
Sbjct: 408 QKYQS 412
>RGD|1305612 [details] [associations]
symbol:Dus2l "dihydrouridine synthase 2-like, SMM1 homolog (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0017150 "tRNA dihydrouridine synthase activity" evidence=IEA]
[GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA]
InterPro:IPR001159 InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF00035 Pfam:PF01207 PROSITE:PS01136
PROSITE:PS50137 SMART:SM00358 InterPro:IPR014720 RGD:1305612
GO:GO:0005739 Gene3D:3.20.20.70 GO:GO:0050660 Gene3D:3.30.160.20
GO:GO:0003725 EMBL:CH473972 eggNOG:COG0042 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 CTD:54920 HOGENOM:HOG000195580
HOVERGEN:HBG079551 KO:K05543 OMA:YHNKLIL OrthoDB:EOG4MW85W
GeneTree:ENSGT00550000075019 EMBL:BC158728 IPI:IPI00363521
RefSeq:NP_001099651.1 UniGene:Rn.18304 SMR:B0BN89 STRING:B0BN89
Ensembl:ENSRNOT00000026827 GeneID:291978 KEGG:rno:291978
UCSC:RGD:1305612 NextBio:633545 Genevestigator:B0BN89
Uniprot:B0BN89
Length = 493
Score = 637 (229.3 bits), Expect = 1.6e-71, Sum P(2) = 1.6e-71
Identities = 124/217 (57%), Positives = 162/217 (74%)
Query: 23 NQANINYSNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTI 82
N ++ Y NK+ILAPMVR+ TLP RLLALDYGAD+VY EEL+D K+++ R VN++L+T+
Sbjct: 4 NSLSLCYHNKLILAPMVRVGTLPMRLLALDYGADIVYCEELIDLKMLQCRRVVNEVLSTV 63
Query: 83 DFVDPLDGSVVFRTCPREKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSL 142
DFV P D VVFRTC RE+++++ Q+GT+D ERAL A+ VE+DVA ID+NMGCPK++S
Sbjct: 64 DFVAP-DDRVVFRTCEREQSRVVFQMGTSDAERALAVARLVENDVAGIDVNMGCPKEYST 122
Query: 143 TGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGV 202
GGMGAALLS PD IL+TL+ PV+CKIR+ + DT+ L KR+E GI AI V
Sbjct: 123 KGGMGAALLSDPDKIEKILSTLVKGTHRPVTCKIRILPSLEDTLNLVKRIERTGISAIAV 182
Query: 203 HGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKE 239
HGR + ERP+H E+IR + + L IPVIANGGS +
Sbjct: 183 HGRNRDERPQHPVSCEVIRAIAETLSIPVIANGGSHD 219
Score = 105 (42.0 bits), Expect = 1.6e-71, Sum P(2) = 1.6e-71
Identities = 24/65 (36%), Positives = 36/65 (55%)
Query: 242 DYGGVFSLNCAFLRNHYPVEKLPKTILYAHCKYKRFEVPKYETVQ--YEKLFRSLVTVNG 299
D G+ + F R YP + PKT L C+ ++ P YETVQ +++F S+VTV
Sbjct: 348 DTSGIIKMAIRFDRRAYPPQITPKTCLLEWCRREKLPQPVYETVQRPIDRMFCSVVTVAE 407
Query: 300 KQYTS 304
++Y S
Sbjct: 408 QKYQS 412
>MGI|MGI:1913619 [details] [associations]
symbol:Dus2l "dihydrouridine synthase 2-like (SMM1, S.
cerevisiae)" species:10090 "Mus musculus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0008033 "tRNA processing" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR001159
InterPro:IPR001269 InterPro:IPR013785 InterPro:IPR018517
Pfam:PF00035 Pfam:PF01207 PROSITE:PS01136 PROSITE:PS50137
SMART:SM00358 InterPro:IPR014720 MGI:MGI:1913619 GO:GO:0005783
GO:GO:0005739 Gene3D:3.20.20.70 GO:GO:0050660 Gene3D:3.30.160.20
GO:GO:0003725 eggNOG:COG0042 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 CTD:54920 HOGENOM:HOG000195580 HOVERGEN:HBG079551
KO:K05543 OMA:YHNKLIL OrthoDB:EOG4MW85W EMBL:AK009391 EMBL:BC058431
IPI:IPI00110119 RefSeq:NP_079794.1 UniGene:Mm.287500 PDB:1WHN
PDBsum:1WHN ProteinModelPortal:Q9D7B1 SMR:Q9D7B1 STRING:Q9D7B1
PhosphoSite:Q9D7B1 PaxDb:Q9D7B1 PRIDE:Q9D7B1
Ensembl:ENSMUST00000034375 GeneID:66369 KEGG:mmu:66369
GeneTree:ENSGT00550000075019 InParanoid:Q9D7B1
EvolutionaryTrace:Q9D7B1 NextBio:321469 Bgee:Q9D7B1
Genevestigator:Q9D7B1 GermOnline:ENSMUSG00000031901 Uniprot:Q9D7B1
Length = 493
Score = 638 (229.6 bits), Expect = 5.3e-71, Sum P(2) = 5.3e-71
Identities = 124/217 (57%), Positives = 163/217 (75%)
Query: 23 NQANINYSNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTI 82
N ++ Y NK+ILAPMVR+ TLP RLLALDYGAD+VY EEL+D K+++ +R VN++L+T+
Sbjct: 4 NSLSLCYHNKLILAPMVRVGTLPMRLLALDYGADIVYCEELIDLKMLQCKRVVNEVLSTV 63
Query: 83 DFVDPLDGSVVFRTCPREKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSL 142
DFV P D VVFRTC RE+++++ Q+GT+D ERAL A+ VE+DVA ID+NMGCPK++S
Sbjct: 64 DFVAP-DDRVVFRTCEREQSRVVFQMGTSDAERALAVARLVENDVAGIDVNMGCPKEYST 122
Query: 143 TGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGV 202
GGMGAALLS PD IL+TL+ PV+CKIR+ + DT+ L KR+E GI AI V
Sbjct: 123 KGGMGAALLSDPDKIEKILSTLVKGTHRPVTCKIRILPSLEDTLNLVKRIERTGISAIAV 182
Query: 203 HGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKE 239
HGR + ERP+H E+IR + + L IPVIANGGS +
Sbjct: 183 HGRNRDERPQHPVSCEVIRAIAETLSIPVIANGGSHD 219
Score = 99 (39.9 bits), Expect = 5.3e-71, Sum P(2) = 5.3e-71
Identities = 23/65 (35%), Positives = 35/65 (53%)
Query: 242 DYGGVFSLNCAFLRNHYPVEKLPKTILYAHCKYKRFEVPKYETVQ--YEKLFRSLVTVNG 299
D G+ + F R YP + PK L C+ ++ P YETVQ +++F S+VTV
Sbjct: 348 DTSGIIKMAIRFDRRAYPPQITPKMCLLEWCRREKLPQPVYETVQRTIDRMFCSVVTVAE 407
Query: 300 KQYTS 304
++Y S
Sbjct: 408 QKYQS 412
>UNIPROTKB|Q0VC60 [details] [associations]
symbol:DUS2L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0050660
"flavin adenine dinucleotide binding" evidence=IEA] [GO:0017150
"tRNA dihydrouridine synthase activity" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] InterPro:IPR001159
InterPro:IPR001269 InterPro:IPR013785 InterPro:IPR018517
Pfam:PF00035 Pfam:PF01207 PROSITE:PS01136 SMART:SM00358
InterPro:IPR014720 GO:GO:0005739 Gene3D:3.20.20.70 GO:GO:0050660
Gene3D:3.30.160.20 GO:GO:0003725 eggNOG:COG0042 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 CTD:54920 HOGENOM:HOG000195580
HOVERGEN:HBG079551 KO:K05543 OMA:YHNKLIL OrthoDB:EOG4MW85W
GeneTree:ENSGT00550000075019 EMBL:DAAA02046690 EMBL:BC120342
IPI:IPI00715355 RefSeq:NP_001068887.1 UniGene:Bt.15762 SMR:Q0VC60
STRING:Q0VC60 Ensembl:ENSBTAT00000019500 GeneID:509795
KEGG:bta:509795 InParanoid:Q0VC60 NextBio:20869132 Uniprot:Q0VC60
Length = 493
Score = 639 (230.0 bits), Expect = 1.8e-70, Sum P(2) = 1.8e-70
Identities = 125/217 (57%), Positives = 162/217 (74%)
Query: 23 NQANINYSNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTI 82
N ++ Y NK+ILAPMVR+ TLP RLLALDYGAD+VY EELVD K+++ +R VN+ L+T+
Sbjct: 4 NNLSLCYHNKLILAPMVRVGTLPMRLLALDYGADIVYCEELVDLKMLQCKRVVNEALSTV 63
Query: 83 DFVDPLDGSVVFRTCPREKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSL 142
DFV P D VVFRTC RE++K++ Q+GT+D ERAL A+ VE+DVA ID+NMGCPK++S
Sbjct: 64 DFVAP-DDRVVFRTCEREQSKVVFQMGTSDAERALAVARLVENDVAGIDVNMGCPKEYST 122
Query: 143 TGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGV 202
GGMGAALLS PD IL+TL+ PV+CKIR+ + DT++L KR+E GI AI V
Sbjct: 123 KGGMGAALLSDPDKIEKILSTLVKGTRRPVTCKIRILPSLEDTLSLVKRIERTGIAAIAV 182
Query: 203 HGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKE 239
HGR + ERP+H E I+ + + L IPVIANGGS +
Sbjct: 183 HGRKREERPQHPVSCEAIKAIAETLSIPVIANGGSHD 219
Score = 93 (37.8 bits), Expect = 1.8e-70, Sum P(2) = 1.8e-70
Identities = 23/65 (35%), Positives = 34/65 (52%)
Query: 242 DYGGVFSLNCAFLRNHYPVEKLPKTILYAHCKYKRFEVPKYETVQ--YEKLFRSLVTVNG 299
D G+ + F R Y + PK L C+ ++ P YETVQ ++LF S+VTV
Sbjct: 348 DTSGIIKMAIKFDRRAYSPQITPKMCLLEWCRREKLAQPVYETVQRPLDRLFCSVVTVAE 407
Query: 300 KQYTS 304
++Y S
Sbjct: 408 QKYQS 412
>UNIPROTKB|I3LES5 [details] [associations]
symbol:DUS2L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0050660
"flavin adenine dinucleotide binding" evidence=IEA] [GO:0017150
"tRNA dihydrouridine synthase activity" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] InterPro:IPR001159
InterPro:IPR001269 InterPro:IPR013785 InterPro:IPR018517
Pfam:PF00035 Pfam:PF01207 PROSITE:PS01136 SMART:SM00358
InterPro:IPR014720 GO:GO:0005739 Gene3D:3.20.20.70 GO:GO:0050660
Gene3D:3.30.160.20 GO:GO:0003725 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 CTD:54920 KO:K05543 OMA:YHNKLIL
GeneTree:ENSGT00550000075019 EMBL:FP565347 RefSeq:XP_003355825.1
Ensembl:ENSSSCT00000028203 GeneID:100621573 KEGG:ssc:100621573
Uniprot:I3LES5
Length = 493
Score = 636 (228.9 bits), Expect = 2.9e-70, Sum P(2) = 2.9e-70
Identities = 124/217 (57%), Positives = 162/217 (74%)
Query: 23 NQANINYSNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTI 82
N ++ Y NK+ILAPMVR+ TLP RLLALDYGAD+VY EEL+D K+++ +R VN+ L+T+
Sbjct: 4 NSLSLCYHNKLILAPMVRVGTLPMRLLALDYGADIVYCEELIDLKMLQCKRVVNEALSTV 63
Query: 83 DFVDPLDGSVVFRTCPREKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSL 142
DFV P D VVFRTC RE+++++ Q+GT+D ERAL AK VE+DVA ID+NMGCPK++S
Sbjct: 64 DFVAP-DDRVVFRTCEREQSRVVFQMGTSDAERALAVAKLVENDVAGIDVNMGCPKEYST 122
Query: 143 TGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGV 202
GGMGAALLS PD IL+TL+ PV+CKIR+ + DT++L KR+E GI AI V
Sbjct: 123 KGGMGAALLSDPDKIEKILSTLVKGTRRPVTCKIRLLPSLEDTLSLVKRIERTGIAAIAV 182
Query: 203 HGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKE 239
HGR + ERP+H E I+ + + L IPVIANGGS +
Sbjct: 183 HGRKREERPQHPVSCEAIKAIAETLSIPVIANGGSHD 219
Score = 94 (38.1 bits), Expect = 2.9e-70, Sum P(2) = 2.9e-70
Identities = 24/65 (36%), Positives = 34/65 (52%)
Query: 242 DYGGVFSLNCAFLRNHYPVEKLPKTILYAHCKYKRFEVPKYETVQ--YEKLFRSLVTVNG 299
D GV + F R Y + PK L C+ ++ P YETVQ ++LF S+VTV
Sbjct: 348 DTSGVIKMAVKFDRRAYSPQITPKMCLLEWCRREKLAQPVYETVQRPMDRLFCSVVTVAE 407
Query: 300 KQYTS 304
++Y S
Sbjct: 408 QKYQS 412
>UNIPROTKB|E2RKU2 [details] [associations]
symbol:DUS2L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA]
[GO:0017150 "tRNA dihydrouridine synthase activity" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA]
InterPro:IPR001159 InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF00035 Pfam:PF01207 PROSITE:PS01136
SMART:SM00358 InterPro:IPR014720 GO:GO:0005739 Gene3D:3.20.20.70
GO:GO:0050660 Gene3D:3.30.160.20 GO:GO:0003725 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 CTD:54920 KO:K05543 OMA:YHNKLIL
GeneTree:ENSGT00550000075019 EMBL:AAEX03004122 RefSeq:XP_546866.3
ProteinModelPortal:E2RKU2 Ensembl:ENSCAFT00000032371 GeneID:489746
KEGG:cfa:489746 NextBio:20862882 Uniprot:E2RKU2
Length = 493
Score = 628 (226.1 bits), Expect = 3.3e-69, Sum P(2) = 3.3e-69
Identities = 120/211 (56%), Positives = 161/211 (76%)
Query: 29 YSNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPL 88
Y NK+ILAPMVR+ TLP RLLALDYGAD+VY EEL+D K+++ +R VN++L+T+DFV P
Sbjct: 10 YHNKLILAPMVRVGTLPMRLLALDYGADIVYCEELIDLKMLQCKRVVNEVLSTVDFVAP- 68
Query: 89 DGSVVFRTCPREKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGA 148
D VVFRTC RE+++++ Q+GT+D +RAL AK VE+DVA ID+NMGCPK++S GGMGA
Sbjct: 69 DERVVFRTCEREQSRVVFQMGTSDADRALAVAKLVENDVAGIDVNMGCPKEYSTKGGMGA 128
Query: 149 ALLSTPDIACNILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKA 208
ALLS PD IL+TL+ + PV+CKIR+ + DT++L KR+E GI A+ VHGR +
Sbjct: 129 ALLSDPDKIEKILSTLVKGIRRPVTCKIRILPSLEDTLSLVKRIERTGIAAVTVHGRKRE 188
Query: 209 ERPRHRNRIEMIRTLTQHLKIPVIANGGSKE 239
ERP+H E I+ + + + IPVIANGGS +
Sbjct: 189 ERPQHPVSCEAIKAIAETVSIPVIANGGSHD 219
Score = 92 (37.4 bits), Expect = 3.3e-69, Sum P(2) = 3.3e-69
Identities = 23/67 (34%), Positives = 35/67 (52%)
Query: 240 IVDYGGVFSLNCAFLRNHYPVEKLPKTILYAHCKYKRFEVPKYETVQ--YEKLFRSLVTV 297
+ D GV + F R Y + PK L C+ ++ P Y+TVQ ++LF S+VTV
Sbjct: 346 VEDTSGVIKMAVKFDRRAYSPQITPKMCLLEWCRKEKLAQPVYDTVQRPLDRLFCSVVTV 405
Query: 298 NGKQYTS 304
++Y S
Sbjct: 406 AEQKYQS 412
>ZFIN|ZDB-GENE-100922-233 [details] [associations]
symbol:dus2l "dihydrouridine synthase 2-like, SMM1
homolog (S. cerevisiae)" species:7955 "Danio rerio" [GO:0017150
"tRNA dihydrouridine synthase activity" evidence=IEA] [GO:0050660
"flavin adenine dinucleotide binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0008033 "tRNA
processing" evidence=IEA] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
InterPro:IPR001159 InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF00035 Pfam:PF01207 PROSITE:PS01136
PROSITE:PS50137 SMART:SM00358 InterPro:IPR014720
ZFIN:ZDB-GENE-100922-233 Gene3D:3.20.20.70 GO:GO:0050660
Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 CTD:54920 KO:K05543
GeneTree:ENSGT00550000075019 EMBL:CU855766 EMBL:CU855937
IPI:IPI00902127 RefSeq:XP_001342694.3 Ensembl:ENSDART00000110221
Ensembl:ENSDART00000139002 GeneID:100003049 KEGG:dre:100003049
NextBio:20785702 Uniprot:E7F220
Length = 504
Score = 640 (230.4 bits), Expect = 8.7e-69, Sum P(2) = 8.7e-69
Identities = 127/223 (56%), Positives = 161/223 (72%)
Query: 19 MANANQANINYSNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDL 78
MAN + + K ILAPMVR+ TLP RLLALDYGAD+VY EEL+D K+ + ER ND+
Sbjct: 6 MANT-VGRLCFRQKNILAPMVRVGTLPMRLLALDYGADIVYCEELIDIKMAQCERVENDV 64
Query: 79 LNTIDFVDPLDGSVVFRTCPREKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPK 138
L TIDFV P D V+FRTC +E +++ Q+GTADPERAL AK VE+DVAA+D+NMGCPK
Sbjct: 65 LQTIDFVAP-DERVMFRTCSKESGRVVFQMGTADPERALAVAKLVENDVAAVDVNMGCPK 123
Query: 139 QFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGII 198
++S GGMG+ALLS P+ ILTTL+ +S PV+CKIR+ DT+ L KR+E G+
Sbjct: 124 EYSTKGGMGSALLSDPEKIEAILTTLVKGISKPVTCKIRILSTIEDTVNLVKRIEKTGVA 183
Query: 199 AIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIV 241
AI VHGR K ERPRH + I+ + Q + +PVIANGGS +IV
Sbjct: 184 AIAVHGRMKDERPRHPVHCDYIQAVAQSVSVPVIANGGSSDIV 226
Score = 76 (31.8 bits), Expect = 8.7e-69, Sum P(2) = 8.7e-69
Identities = 20/54 (37%), Positives = 28/54 (51%)
Query: 253 FLRNHYPVEKLPKTILYAHCKYKRFEVPKYETVQ--YEKLFRSLVTVNGKQYTS 304
F R YP + PK L + ++ E P YET Q ++ F+S V V K+Y S
Sbjct: 362 FERRDYPPQITPKMFLLEWSRKEKLEQPVYETEQRSQDRGFQSTVIVADKKYRS 415
>UNIPROTKB|E1C4F6 [details] [associations]
symbol:DUS2L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003725 "double-stranded RNA binding" evidence=IEA]
[GO:0017150 "tRNA dihydrouridine synthase activity" evidence=IEA]
[GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001159
InterPro:IPR001269 InterPro:IPR013785 InterPro:IPR018517
Pfam:PF00035 Pfam:PF01207 PROSITE:PS01136 PROSITE:PS50137
SMART:SM00358 InterPro:IPR014720 GO:GO:0005739 Gene3D:3.20.20.70
GO:GO:0050660 Gene3D:3.30.160.20 GO:GO:0003725 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 OMA:YHNKLIL
GeneTree:ENSGT00550000075019 EMBL:AADN02038196 IPI:IPI00588517
ProteinModelPortal:E1C4F6 Ensembl:ENSGALT00000005388 Uniprot:E1C4F6
Length = 493
Score = 613 (220.8 bits), Expect = 1.6e-67, Sum P(2) = 1.6e-67
Identities = 123/222 (55%), Positives = 163/222 (73%)
Query: 29 YSNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPL 88
+ K ILAPMVR+ TLP RLLALDYGAD+VY EEL+D K+++ +R VN++L T+DFV P
Sbjct: 9 FRGKNILAPMVRVGTLPMRLLALDYGADIVYCEELIDIKMMQCKRVVNEILETVDFVAPN 68
Query: 89 DGSVVFRTCPREKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGA 148
+ VVFRTC RE++++I Q+G+AD RAL AK VE DVA IDINMGCPK++S GGMGA
Sbjct: 69 E-RVVFRTCERERHRVIFQMGSADAGRALAVAKLVESDVAGIDINMGCPKEYSTKGGMGA 127
Query: 149 ALLSTPDIACNILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRT-- 206
ALLS PD +ILTTL+ + PV+CKIR+ + DT+ L KR+E GI AI VHGR
Sbjct: 128 ALLSDPDKIESILTTLVKGICKPVTCKIRILPSVEDTVDLVKRIEKTGIAAIAVHGRLER 187
Query: 207 -KAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIV-DYGGV 246
K ERP+H ++I+ +++ + IPVIANGGS + + +YG +
Sbjct: 188 KKEERPQHPVHCDVIKAISEAVSIPVIANGGSHDFIKEYGDI 229
Score = 91 (37.1 bits), Expect = 1.6e-67, Sum P(2) = 1.6e-67
Identities = 22/61 (36%), Positives = 33/61 (54%)
Query: 246 VFSLNCAFLRNHYPVEKLPKTILYAHCKYKRFEVPKYETVQ--YEKLFRSLVTVNGKQYT 303
V + F + YP + PK L C+ ++ P YETVQ ++LF S+VTV ++Y
Sbjct: 352 VIKMAVRFDKREYPPQITPKMYLLEWCRKEKHPQPVYETVQRPLDRLFCSVVTVADQKYR 411
Query: 304 S 304
S
Sbjct: 412 S 412
>FB|FBgn0030554 [details] [associations]
symbol:CG1434 species:7227 "Drosophila melanogaster"
[GO:0017150 "tRNA dihydrouridine synthase activity" evidence=ISS]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0008033 "tRNA
processing" evidence=IEA] InterPro:IPR001159 InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF00035 Pfam:PF01207
PROSITE:PS01136 SMART:SM00358 InterPro:IPR014720 Gene3D:3.20.20.70
GO:GO:0050660 EMBL:AE014298 Gene3D:3.30.160.20 GO:GO:0005622
GO:GO:0003725 GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
KO:K05543 GeneTree:ENSGT00550000075019 OMA:KEMIMHY
FlyBase:FBgn0030554 EMBL:BT031195 RefSeq:NP_572950.2 UniGene:Dm.163
SMR:Q9VY45 STRING:Q9VY45 EnsemblMetazoa:FBtr0073903 GeneID:32377
KEGG:dme:Dmel_CG1434 UCSC:CG1434-RA InParanoid:Q9VY45
GenomeRNAi:32377 NextBio:778177 Uniprot:Q9VY45
Length = 473
Score = 650 (233.9 bits), Expect = 9.7e-64, P = 9.7e-64
Identities = 124/227 (54%), Positives = 169/227 (74%)
Query: 27 INYSNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVD 86
++Y NK+ILAPMVR+ TLP RLLAL+ GAD+VY+EELVD KL+K+ R+ N L T+DFVD
Sbjct: 20 LDYRNKLILAPMVRVGTLPMRLLALEMGADIVYTEELVDIKLIKSIRRPNPALGTVDFVD 79
Query: 87 PLDGSVVFRTCPREKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGM 146
P DG++VFRTC +E ++++LQ+GT+D RAL K ++ D++ +DINMGCPK+FS+ GGM
Sbjct: 80 PSDGTIVFRTCAQETSRLVLQMGTSDAGRALAVGKLLQRDISGLDINMGCPKEFSIKGGM 139
Query: 147 GAALLSTPDIACNILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRT 206
GAALL+ PD A +IL TL S L IPV+CKIR+ + TI L ++L A GI AIG+H RT
Sbjct: 140 GAALLADPDKAAHILRTLCSGLDIPVTCKIRILPDVEGTIDLVQKLAATGIAAIGIHART 199
Query: 207 KAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGV--FSLNC 251
+ ERP+H E++R + Q + IP+IANGGSK + Y + F + C
Sbjct: 200 RDERPQHPAHPEVLRAVAQAVDIPIIANGGSKNMHCYDDLRKFQMEC 246
Score = 137 (53.3 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 41/125 (32%), Positives = 61/125 (48%)
Query: 189 CKRLEA-CGIIAIGVHGRTKAERPRH-----RNRIEMIRTLTQHLKIPVIANGGSKEIVD 242
C+ L+ C I +G + R K + R +E L + K+ A + E
Sbjct: 316 CQTLQQICEIWELGDYCRRKQRELKTMGNSGRAEVEPPEALAKRQKLEDAAIAITDE--- 372
Query: 243 YGGVFSLNCAFLRNHYPVEK-LPKTILYAHCKYKRFEVPKYETVQYEKLFRSLVTVNGKQ 301
Y G+ + FLR+ YP + LPKT LY H P YET Q +KLFRS+ T +G++
Sbjct: 373 YDGIICRHMPFLRSTYPSDNHLPKTQLYVHAVKTGKSPPAYETQQCDKLFRSICTYDGQR 432
Query: 302 YTSKF 306
++S F
Sbjct: 433 FSSSF 437
>UNIPROTKB|J3QLD5 [details] [associations]
symbol:DUS2L "tRNA-dihydrouridine(20) synthase
[NAD(P)+]-like" species:9606 "Homo sapiens" [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136 Gene3D:3.20.20.70
GO:GO:0050660 EMBL:AC130462 EMBL:AC040162 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 HGNC:HGNC:26014
Ensembl:ENST00000562246 Uniprot:J3QLD5
Length = 208
Score = 601 (216.6 bits), Expect = 1.5e-58, P = 1.5e-58
Identities = 116/205 (56%), Positives = 153/205 (74%)
Query: 23 NQANINYSNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTI 82
N ++ Y NK+ILAPMVR+ TLP RLLALDYGAD+VY EEL+D K+++ +R VN++L+T+
Sbjct: 4 NSLSLCYHNKLILAPMVRVGTLPMRLLALDYGADIVYCEELIDLKMIQCKRVVNEVLSTV 63
Query: 83 DFVDPLDGSVVFRTCPREKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSL 142
DFV P D VVFRTC RE+N+++ Q+GT+D ERAL A+ VE+DVA ID+NMGCPKQ+S
Sbjct: 64 DFVAP-DDRVVFRTCEREQNRVVFQMGTSDAERALAVARLVENDVAGIDVNMGCPKQYST 122
Query: 143 TGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGV 202
GGMGAALLS PD IL+TL+ PV+CKIR+ + DT++L KR+E GI AI V
Sbjct: 123 KGGMGAALLSDPDKIEKILSTLVKGTRRPVTCKIRILPSLEDTLSLVKRIERTGIAAIAV 182
Query: 203 HGRTKAERPRHRNRIEMIRTLTQHL 227
HGR + ERP+H E+I+ + L
Sbjct: 183 HGRKREERPQHPVSCEVIKAIADTL 207
>UNIPROTKB|E7EUN9 [details] [associations]
symbol:DUS2L "tRNA-dihydrouridine(20) synthase
[NAD(P)+]-like" species:9606 "Homo sapiens" [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001159 InterPro:IPR001269
InterPro:IPR013785 Pfam:PF00035 Pfam:PF01207 SMART:SM00358
InterPro:IPR014720 GO:GO:0005737 Gene3D:3.20.20.70 GO:GO:0050660
Gene3D:3.30.160.20 GO:GO:0003725 EMBL:AC130462 EMBL:AC040162
GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082 GeneID:54920
HGNC:HGNC:26014 IPI:IPI00909876 RefSeq:NP_001258692.1
ProteinModelPortal:E7EUN9 SMR:E7EUN9 Ensembl:ENST00000432752
UCSC:uc010vkk.2 ArrayExpress:E7EUN9 Bgee:E7EUN9 Uniprot:E7EUN9
Length = 458
Score = 281 (104.0 bits), Expect = 2.4e-58, Sum P(3) = 2.4e-58
Identities = 52/87 (59%), Positives = 71/87 (81%)
Query: 23 NQANINYSNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTI 82
N ++ Y NK+ILAPMVR+ TLP RLLALDYGAD+VY EEL+D K+++ +R VN++L+T+
Sbjct: 4 NSLSLCYHNKLILAPMVRVGTLPMRLLALDYGADIVYCEELIDLKMIQCKRVVNEVLSTV 63
Query: 83 DFVDPLDGSVVFRTCPREKNKIILQIG 109
DFV P D VVFRTC RE+N+++ Q+G
Sbjct: 64 DFVAP-DDRVVFRTCEREQNRVVFQMG 89
Score = 251 (93.4 bits), Expect = 2.4e-58, Sum P(3) = 2.4e-58
Identities = 53/104 (50%), Positives = 68/104 (65%)
Query: 144 GGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVH 203
GGMGAALLS PD IL+TL+ PV+CKIR+ + DT++L KR+E GI AI VH
Sbjct: 89 GGMGAALLSDPDKIEKILSTLVKGTRRPVTCKIRILPSLEDTLSLVKRIERTGIAAIAVH 148
Query: 204 GRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKE-IVDYGGV 246
GR + ERP+H E+I+ + L IPVIANGGS + I Y +
Sbjct: 149 GRKREERPQHPVSCEVIKAIADTLSIPVIANGGSHDHIQQYSDI 192
Score = 107 (42.7 bits), Expect = 2.4e-58, Sum P(3) = 2.4e-58
Identities = 25/65 (38%), Positives = 35/65 (53%)
Query: 242 DYGGVFSLNCAFLRNHYPVEKLPKTILYAHCKYKRFEVPKYETVQ--YEKLFRSLVTVNG 299
D GV + F R YP + PK L C+ ++ P YETVQ ++LF S+VTV
Sbjct: 313 DTSGVIKMAVKFDRRAYPAQITPKMCLLEWCRREKLAQPVYETVQRPLDRLFSSIVTVAE 372
Query: 300 KQYTS 304
++Y S
Sbjct: 373 QKYQS 377
>TAIR|locus:2114713 [details] [associations]
symbol:AT3G49640 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006808 "regulation of nitrogen
utilization" evidence=ISS] [GO:0008033 "tRNA processing"
evidence=IEA] [GO:0017150 "tRNA dihydrouridine synthase activity"
evidence=IEA] [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136
EMBL:CP002686 Gene3D:3.20.20.70 GO:GO:0050660 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 KO:K05543 OMA:KEMIMHY
IPI:IPI00548775 RefSeq:NP_190533.3 UniGene:At.74022
ProteinModelPortal:F4IY04 SMR:F4IY04 PRIDE:F4IY04
EnsemblPlants:AT3G49640.1 GeneID:824126 KEGG:ath:AT3G49640
Uniprot:F4IY04
Length = 329
Score = 584 (210.6 bits), Expect = 9.6e-57, P = 9.6e-57
Identities = 113/220 (51%), Positives = 157/220 (71%)
Query: 27 INYSNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVD 86
++Y NK++LAPMVR+ TL FR+LA +YGAD+ Y EE++DHKLVK ER++N T +FV+
Sbjct: 1 MDYQNKLVLAPMVRVGTLSFRMLAAEYGADITYGEEIIDHKLVKCERRLNVASGTSEFVE 60
Query: 87 PLDGSVVFRTCPREKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGM 146
+VVF TC EK++++ Q+GT+D RAL+A++ V +DVA IDINMGCPK FS+ GGM
Sbjct: 61 KGTDNVVFSTCDEEKSRVVFQMGTSDAVRALKASEIVCNDVATIDINMGCPKAFSIQGGM 120
Query: 147 GAALLSTPDIACNILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRT 206
GAALLS P++ +IL TL NL +PV+CKIR+ + ADT+ L +R+E G+ A+ VHGR
Sbjct: 121 GAALLSKPELIHDILATLKRNLDVPVTCKIRLLKSPADTVELARRIEKLGVPALAVHGRK 180
Query: 207 KAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGV 246
A+RPR + + I + L IPVIANG E D+ +
Sbjct: 181 IADRPRDPAKWDEIADVVAALSIPVIANGDVLEYDDFSRI 220
>WB|WBGene00013201 [details] [associations]
symbol:Y54E5A.6 species:6239 "Caenorhabditis elegans"
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0008033 "tRNA processing"
evidence=IEA] [GO:0017150 "tRNA dihydrouridine synthase activity"
evidence=IEA] [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF00035 Pfam:PF01207
PROSITE:PS01136 SMART:SM00358 InterPro:IPR014720 Gene3D:3.20.20.70
GO:GO:0050660 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
EMBL:AL032643 eggNOG:COG0042 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 HOGENOM:HOG000195580 KO:K05543
GeneTree:ENSGT00550000075019 OMA:TMTKYVV PIR:T27160
RefSeq:NP_493554.1 UniGene:Cel.16372 ProteinModelPortal:Q9XWJ9
SMR:Q9XWJ9 PaxDb:Q9XWJ9 EnsemblMetazoa:Y54E5A.6 GeneID:173331
KEGG:cel:CELE_Y54E5A.6 UCSC:Y54E5A.6 CTD:173331 WormBase:Y54E5A.6
InParanoid:Q9XWJ9 NextBio:879203 Uniprot:Q9XWJ9
Length = 436
Score = 507 (183.5 bits), Expect = 3.7e-54, Sum P(2) = 3.7e-54
Identities = 109/216 (50%), Positives = 143/216 (66%)
Query: 29 YSNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPL 88
Y NK ILAPMVR P RLL L YGADL Y+EE+VD KL++ R VN+ L TID+ +
Sbjct: 5 YRNKKILAPMVRAGRTPLRLLCLKYGADLCYTEEIVDKKLIEATRVVNEALGTIDYRNGD 64
Query: 89 DGSVVFRTCPREKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGA 148
D ++ R P EK + ILQIGT E+A + A+ V DVA ID+NMGCPK FS+ GMGA
Sbjct: 65 D--IILRLAPEEKGRCILQIGTNSGEKAAKIAQIVGDDVAGIDVNMGCPKPFSIHCGMGA 122
Query: 149 ALLSTPDIACNILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKA 208
ALL+ + +ILT+L S +PV+CKIRV + DT+ L + +E C + A+GVHGR +
Sbjct: 123 ALLTQTEKIVDILTSLKSAAKVPVTCKIRVLDDPEDTLKLVQEIEKCRVSALGVHGRRRD 182
Query: 209 ERPRHRNRIEMIRTLTQHLK-IPVIANGGSKEIVDY 243
ER + RI+ IR + Q ++ IPVI+NG S EI Y
Sbjct: 183 ERQPDKCRIDEIRDVAQAVQSIPVISNGLSDEIEQY 218
Score = 70 (29.7 bits), Expect = 3.7e-54, Sum P(2) = 3.7e-54
Identities = 19/69 (27%), Positives = 33/69 (47%)
Query: 241 VDYGGVFSLNCAF----LRNHYPVEKLPKTILYAHCKYKRFEVPKYETVQYE-KLFRSLV 295
VD GV+++ +F L+N PK +L+ +C + YE V+ + K F +
Sbjct: 333 VDDDGVYNIEVSFPLKRLKNSVGFSPTPKMVLHDYCVETKIPKATYEVVKRDDKRFVATA 392
Query: 296 TVNGKQYTS 304
+ K+Y S
Sbjct: 393 CIGDKKYRS 401
>DICTYBASE|DDB_G0283877 [details] [associations]
symbol:dus2l "tRNA-dihydrouridine synthase 2-like
protein" species:44689 "Dictyostelium discoideum" [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA;ISS] [GO:0008033
"tRNA processing" evidence=IEA;ISS] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0002943 "tRNA dihydrouridine synthesis"
evidence=IEA;ISS] [GO:0006400 "tRNA modification" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136
dictyBase:DDB_G0283877 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000153_GR Gene3D:3.20.20.70 GO:GO:0050660
EMBL:AAFI02000057 eggNOG:COG0042 GO:GO:0017150 PANTHER:PTHR11082
KO:K05543 RefSeq:XP_638879.1 ProteinModelPortal:Q54QJ2
EnsemblProtists:DDB0238070 GeneID:8624277 KEGG:ddi:DDB_G0283877
OMA:TMTKYVV ProtClustDB:CLSZ2430328 Uniprot:Q54QJ2
Length = 402
Score = 502 (181.8 bits), Expect = 4.7e-48, P = 4.7e-48
Identities = 110/224 (49%), Positives = 151/224 (67%)
Query: 23 NQANINYSNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTI 82
N ++Y NK I+APMVR+ T P R+LA +YG D+ YSEEL+D KL+K+ R VN+ L TI
Sbjct: 24 NGVVMDYYNKKIMAPMVRVGTYPMRILAYNYGCDIAYSEELIDLKLMKSTRVVNEKLKTI 83
Query: 83 DFVDPLDGSVVFRTCPREKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSL 142
DF+ D ++ +RT ++ + LQ+GTA ALEAAK V +D+ A+DINMGCPK FS+
Sbjct: 84 DFIAK-DQTLCYRTSEKDVRNV-LQLGTASSMTALEAAKVVCNDICALDINMGCPKFFSV 141
Query: 143 TGGMGAALLSTPDIACNILTTLISNLS-IPVSCKIRVFHNEADTIALCKRLEACGIIAIG 201
GGMG+ALLS P+ +ILTTL NL+ IP++CKIR+ + +TI L + +E+ G+ AIG
Sbjct: 142 QGGMGSALLSKPETIKDILTTLKRNLNGIPITCKIRLLSTDQETIDLLRIIESTGVSAIG 201
Query: 202 VHGRTKAERPR---HRNRIEMIRTLTQHLKIPVIANGGSKEIVD 242
VH R ERPR H +R+E I + +P+IANG E D
Sbjct: 202 VHCRMIPERPRDPAHWDRLENILS-NASFSVPIIANGDIFEHAD 244
>UNIPROTKB|I3L4Y9 [details] [associations]
symbol:DUS2L "tRNA-dihydrouridine(20) synthase
[NAD(P)+]-like" species:9606 "Homo sapiens" [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136 GO:GO:0005739
Gene3D:3.20.20.70 GO:GO:0050660 EMBL:AC130462 EMBL:AC040162
GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082 HGNC:HGNC:26014
Ensembl:ENST00000575677 Bgee:I3L4Y9 Uniprot:I3L4Y9
Length = 158
Score = 499 (180.7 bits), Expect = 9.8e-48, P = 9.8e-48
Identities = 95/156 (60%), Positives = 123/156 (78%)
Query: 23 NQANINYSNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTI 82
N ++ Y NK+ILAPMVR+ TLP RLLALDYGAD+VY EEL+D K+++ +R VN++L+T+
Sbjct: 4 NSLSLCYHNKLILAPMVRVGTLPMRLLALDYGADIVYCEELIDLKMIQCKRVVNEVLSTV 63
Query: 83 DFVDPLDGSVVFRTCPREKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSL 142
DFV P D VVFRTC RE+N+++ Q+GT+D ERAL A+ VE+DVA ID+NMGCPKQ+S
Sbjct: 64 DFVAP-DDRVVFRTCEREQNRVVFQMGTSDAERALAVARLVENDVAGIDVNMGCPKQYST 122
Query: 143 TGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRV 178
GGMGAALLS PD IL+TL+ PV+CKIR+
Sbjct: 123 KGGMGAALLSDPDKIEKILSTLVKGTRRPVTCKIRI 158
>POMBASE|SPBC1709.06 [details] [associations]
symbol:dus2 "tRNA dihydrouridine synthase Dus2
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006400 "tRNA modification" evidence=ISO] [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=ISO] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136
PomBase:SPBC1709.06 GO:GO:0005634 GO:GO:0005737 Gene3D:3.20.20.70
GO:GO:0050660 EMBL:CU329671 GenomeReviews:CU329671_GR
eggNOG:COG0042 GO:GO:0017150 PANTHER:PTHR11082 KO:K05543 PIR:T39634
RefSeq:NP_595439.1 ProteinModelPortal:O74731 STRING:O74731
EnsemblFungi:SPBC1709.06.1 GeneID:2540200 KEGG:spo:SPBC1709.06
OMA:LVERICD OrthoDB:EOG4PG98M NextBio:20801332 Uniprot:O74731
Length = 479
Score = 461 (167.3 bits), Expect = 1.0e-43, P = 1.0e-43
Identities = 101/219 (46%), Positives = 137/219 (62%)
Query: 27 INYSNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVK---TERKVNDLLNTID 83
+NYSNK+ LAPMVR+ LP RLLAL YGA+LV+ E+VD L+ ER VND +N ID
Sbjct: 4 LNYSNKVCLAPMVRIGELPMRLLALRYGANLVWGPEIVDKALLSGTPVERVVNDRINCID 63
Query: 84 FVDPLDGSVVFRTCPREKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLT 143
FV P V+FR P E N++I Q+G+A PE A+EAAK V +DVA ID+N GCPK FS+
Sbjct: 64 FVKPPSNKVLFRVHPLEANRLIFQLGSASPELAVEAAKLVANDVAGIDLNCGCPKHFSVH 123
Query: 144 GGMGAALLSTPDIACNILTTLISNLSIP----VSCKIRVFHNEADTIALCKRLEACGIIA 199
GMGA LL D +IL L++ + P +SCKIR+ + DT+ L +R+ G+ A
Sbjct: 124 AGMGAGLLKNQDRLVSILDALVNEIGKPYKISISCKIRLLETKEDTLKLVERICDTGVRA 183
Query: 200 IGVHGRTKAER---PRHRNRIEMIRTLTQHLKIPVIANG 235
I VH RT R P R+ + I + ++ + ++ NG
Sbjct: 184 ITVHCRTTPMRNTEPADRSYLSEIVGVCRNKDVSILVNG 222
>SGD|S000005298 [details] [associations]
symbol:SMM1 "Dihydrouridine synthase" species:4932
"Saccharomyces cerevisiae" [GO:0002943 "tRNA dihydrouridine
synthesis" evidence=IEA] [GO:0006400 "tRNA modification"
evidence=IMP;IDA] [GO:0005737 "cytoplasm" evidence=IEA;IDA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0008033 "tRNA
processing" evidence=IEA;IGI] [GO:0017150 "tRNA dihydrouridine
synthase activity" evidence=IEA;IDA] [GO:0050660 "flavin adenine
dinucleotide binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;IDA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136
SGD:S000005298 GO:GO:0005634 GO:GO:0005737 Gene3D:3.20.20.70
GO:GO:0050660 EMBL:BK006947 EMBL:Z71631 eggNOG:COG0042
GO:GO:0017150 PANTHER:PTHR11082 HOGENOM:HOG000195580 KO:K05543
GeneTree:ENSGT00550000075019 OrthoDB:EOG4PG98M EMBL:X91816
EMBL:Z71630 PIR:S63345 RefSeq:NP_014412.1 ProteinModelPortal:P53720
DIP:DIP-4102N MINT:MINT-551094 STRING:P53720 PaxDb:P53720
PeptideAtlas:P53720 EnsemblFungi:YNR015W GeneID:855749
KEGG:sce:YNR015W CYGD:YNR015w OMA:VEESMFY
BioCyc:MetaCyc:MONOMER-16677 NextBio:980160 Genevestigator:P53720
GermOnline:YNR015W Uniprot:P53720
Length = 384
Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 102/226 (45%), Positives = 140/226 (61%)
Query: 27 INYSNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVD 86
+ Y+ K++LAPMVR LP RL+AL +GADLV+S E++D KL++ RK N L T+D+V
Sbjct: 2 VTYAGKLVLAPMVRAGELPTRLMALAHGADLVWSPEIIDKKLIQCVRKENTALQTVDYVV 61
Query: 87 PLD-----GSVVFRTCPR-EKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQF 140
P ++VFRT P+ E +K+I QIG+A P A +AA KV +DV+ IDIN GCPK F
Sbjct: 62 PSKVQTRPETLVFRTYPKLESSKLIFQIGSASPALATQAALKVINDVSGIDINAGCPKHF 121
Query: 141 SLTGGMGAALLSTPDIACNILTTLISNL----SIPVSCKIRVFHNEADTIALCKRLEACG 196
S+ GMG+ALL TPD C IL L+ N+ S P+S KIR+ + DT+ L KRL A G
Sbjct: 122 SIHSGMGSALLRTPDTLCLILKELVKNVGNPHSKPISVKIRLLDTKQDTLQLVKRLCATG 181
Query: 197 IIAIGVHGRTKAERPRHR---NRIEMIRTLTQHLKIPVIANGGSKE 239
I + VH R R R + + I I + Q + +I NG ++
Sbjct: 182 ITNLTVHCRKTEMRNREQPITDYIAEIYEICQANNVSLIVNGAIRD 227
>CGD|CAL0003882 [details] [associations]
symbol:SMM1 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0017150 "tRNA dihydrouridine synthase activity" evidence=IEA]
[GO:0006400 "tRNA modification" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136
CGD:CAL0003882 Gene3D:3.20.20.70 GO:GO:0050660 EMBL:AACQ01000101
EMBL:AACQ01000099 eggNOG:COG0042 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 KO:K05543 RefSeq:XP_714536.1 RefSeq:XP_714632.1
ProteinModelPortal:Q59YG4 STRING:Q59YG4 GeneID:3643710
GeneID:3643778 KEGG:cal:CaO19.1362 KEGG:cal:CaO19.8942
Uniprot:Q59YG4
Length = 433
Score = 438 (159.2 bits), Expect = 2.8e-41, P = 2.8e-41
Identities = 102/239 (42%), Positives = 147/239 (61%)
Query: 27 INYSNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFV- 85
I Y+NK+ LAPMVR LP RLL+L YG DL+++ ELVD K++++ R +N LNTID++
Sbjct: 2 IEYANKLCLAPMVRSGELPIRLLSLRYGCDLLWTPELVDKKILQSTRIINQELNTIDYIV 61
Query: 86 ---DPLDG-SVVFRTCPREKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFS 141
D +V+FR P E ++ILQ+G++DP+ A++AA+KV DV ID+N GCPK FS
Sbjct: 62 SNHQQSDKKTVIFRKHPVETGRLILQLGSSDPQLAVDAARKVIDDVDGIDLNCGCPKNFS 121
Query: 142 LTGGMGAALLSTPDIACNILTTLISNLSIP----VSCKIRVFHNEADTIALCKRLEACGI 197
GMGA LL TPD C+IL L+ + IP +SCKIR+F+N + L +++ GI
Sbjct: 122 THSGMGAELLKTPDKLCSILINLVEKIGIPNKKSISCKIRLFNNYDQSKNLIEKILQTGI 181
Query: 198 IAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNCAFLRN 256
+ +H RT P RNR + + L IP+I G +++ G + N A L+N
Sbjct: 182 SNLTIHCRT----PIMRNRQDPVWNFLPKL-IPIIQTAGVNLVIN-GNM--QNVADLKN 232
>ASPGD|ASPL0000038251 [details] [associations]
symbol:AN2967 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0050660 "flavin adenine
dinucleotide binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0008033 "tRNA
processing" evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136 Gene3D:3.20.20.70
GO:GO:0050660 EMBL:BN001306 EMBL:AACD01000051 eggNOG:COG0042
GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082 HOGENOM:HOG000195580
KO:K05543 OrthoDB:EOG4PG98M RefSeq:XP_660571.1
ProteinModelPortal:Q5B913 STRING:Q5B913
EnsemblFungi:CADANIAT00010113 GeneID:2873785 KEGG:ani:AN2967.2
OMA:KEMIMHY Uniprot:Q5B913
Length = 437
Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
Identities = 98/229 (42%), Positives = 131/229 (57%)
Query: 25 AN-INYSNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTID 83
AN ++Y K++LAPMVR LP RLLAL YGADL + E +D ++ T R+VN I+
Sbjct: 12 ANGVDYRGKVVLAPMVRSGELPSRLLALKYGADLCWGPETIDRAMIGTTRRVNPRNGCIE 71
Query: 84 FV---------DPLDGSVVFRTCP-REKNKIILQIGTADPERALEAAKKVEHDVAAIDIN 133
F D SV++R P REK K+I Q+GTA+PE A++A K V DV ID+N
Sbjct: 72 FTRMPSNSVNKDDAKESVIYRLDPAREKGKLIFQMGTANPELAVQAGKLVAADVNGIDVN 131
Query: 134 MGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIP----VSCKIRVFHNEADTIALC 189
GCPK FS +GGMGAALL TPD +IL L+ + P +S KIR+ T +L
Sbjct: 132 SGCPKPFSTSGGMGAALLRTPDKLVSILEALVKEVGEPYQIGISVKIRLLETPELTESLV 191
Query: 190 KRLEACGIIAIGVHGRTKAERPRHR---NRIEMIRTLTQHLKIPVIANG 235
RL GI + +H RT RPR R +++ MI + + + I NG
Sbjct: 192 SRLVRTGITGLTIHCRTTPMRPRERAIRDQLRMIVSTCHNAGVACIMNG 240
>UNIPROTKB|I3L4H0 [details] [associations]
symbol:DUS2L "tRNA-dihydrouridine(20) synthase
[NAD(P)+]-like" species:9606 "Homo sapiens" [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
Pfam:PF01207 Gene3D:3.20.20.70 GO:GO:0050660 EMBL:AC130462
EMBL:AC040162 GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
HGNC:HGNC:26014 Ensembl:ENST00000570709 Uniprot:I3L4H0
Length = 124
Score = 404 (147.3 bits), Expect = 1.1e-37, P = 1.1e-37
Identities = 75/122 (61%), Positives = 99/122 (81%)
Query: 23 NQANINYSNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTI 82
N ++ Y NK+ILAPMVR+ TLP RLLALDYGAD+VY EEL+D K+++ +R VN++L+T+
Sbjct: 4 NSLSLCYHNKLILAPMVRVGTLPMRLLALDYGADIVYCEELIDLKMIQCKRVVNEVLSTV 63
Query: 83 DFVDPLDGSVVFRTCPREKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSL 142
DFV P D VVFRTC RE+N+++ Q+GT+D ERAL A+ VE+DVA ID+NMGCPKQ+S
Sbjct: 64 DFVAP-DDRVVFRTCEREQNRVVFQMGTSDAERALAVARLVENDVAGIDVNMGCPKQYST 122
Query: 143 TG 144
G
Sbjct: 123 KG 124
>UNIPROTKB|H3BM64 [details] [associations]
symbol:DUS2L "tRNA-dihydrouridine(20) synthase
[NAD(P)+]-like" species:9606 "Homo sapiens" [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
Pfam:PF01207 GO:GO:0005739 Gene3D:3.20.20.70 GO:GO:0050660
EMBL:AC130462 EMBL:AC040162 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 HGNC:HGNC:26014 Ensembl:ENST00000566306
Bgee:H3BM64 Uniprot:H3BM64
Length = 115
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 69/113 (61%), Positives = 92/113 (81%)
Query: 23 NQANINYSNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTI 82
N ++ Y NK+ILAPMVR+ TLP RLLALDYGAD+VY EEL+D K+++ +R VN++L+T+
Sbjct: 4 NSLSLCYHNKLILAPMVRVGTLPMRLLALDYGADIVYCEELIDLKMIQCKRVVNEVLSTV 63
Query: 83 DFVDPLDGSVVFRTCPREKNKIILQIGTADPERALEAAKKVEHDVAAIDINMG 135
DFV P D VVFRTC RE+N+++ Q+GT+D ERAL A+ VE+DVA ID+NMG
Sbjct: 64 DFVAP-DDRVVFRTCEREQNRVVFQMGTSDAERALAVARLVENDVAGIDVNMG 115
>UNIPROTKB|H3BQX4 [details] [associations]
symbol:DUS2L "tRNA-dihydrouridine(20) synthase
[NAD(P)+]-like" species:9606 "Homo sapiens" [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
Pfam:PF01207 GO:GO:0005739 Gene3D:3.20.20.70 GO:GO:0050660
EMBL:AC130462 EMBL:AC040162 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 HGNC:HGNC:26014 Ensembl:ENST00000568099
Bgee:H3BQX4 Uniprot:H3BQX4
Length = 107
Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
Identities = 63/105 (60%), Positives = 85/105 (80%)
Query: 23 NQANINYSNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTI 82
N ++ Y NK+ILAPMVR+ TLP RLLALDYGAD+VY EEL+D K+++ +R VN++L+T+
Sbjct: 4 NSLSLCYHNKLILAPMVRVGTLPMRLLALDYGADIVYCEELIDLKMIQCKRVVNEVLSTV 63
Query: 83 DFVDPLDGSVVFRTCPREKNKIILQIGTADPERALEAAKKVEHDV 127
DFV P D VVFRTC RE+N+++ Q+GT+D ERAL A+ VE+DV
Sbjct: 64 DFVAP-DDRVVFRTCEREQNRVVFQMGTSDAERALAVARLVENDV 107
>TAIR|locus:2155528 [details] [associations]
symbol:AT5G67220 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0006808
"regulation of nitrogen utilization" evidence=ISS] [GO:0008033
"tRNA processing" evidence=IEA] [GO:0017150 "tRNA dihydrouridine
synthase activity" evidence=IEA] [GO:0050660 "flavin adenine
dinucleotide binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136
EMBL:CP002688 Gene3D:3.20.20.70 GO:GO:0050660 EMBL:AB020742
HOGENOM:HOG000203649 KO:K05542 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 UniGene:At.66656 UniGene:At.9615 EMBL:AY049299
EMBL:AY102157 IPI:IPI00528780 RefSeq:NP_201523.1
ProteinModelPortal:Q9FH91 SMR:Q9FH91 STRING:Q9FH91 PRIDE:Q9FH91
EnsemblPlants:AT5G67220.1 GeneID:836857 KEGG:ath:AT5G67220
TAIR:At5g67220 InParanoid:Q9FH91 OMA:VERAWAH PhylomeDB:Q9FH91
ProtClustDB:CLSN2686916 Genevestigator:Q9FH91 Uniprot:Q9FH91
Length = 423
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 78/213 (36%), Positives = 113/213 (53%)
Query: 32 KIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDGS 91
K I+APMV + LPFRLL YGA Y+ L +TE+ N
Sbjct: 89 KYIVAPMVDNSELPFRLLCQKYGAQAAYTPMLHSRIFTETEKYRNQ-------------- 134
Query: 92 VVFRTCPREKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALL 151
F TC +E + +Q DP+ LEAAK+VE +DIN+GCP++ + G GA L+
Sbjct: 135 -EFTTC-KEDRPLFVQFCANDPDTLLEAAKRVEPYCDYVDINLGCPQRIARRGNYGAFLM 192
Query: 152 STPDIACNILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERP 211
+ +++ L NL++PVSCKIR+F N DT+ K LE G + VHGRT+ E+
Sbjct: 193 DNLPLVKSLVEKLAQNLNVPVSCKIRIFPNLEDTLKYAKMLEDAGCSLLAVHGRTRDEKD 252
Query: 212 RHRNRIEM--IRTLTQHLKIPVIANGGSKEIVD 242
+ R + I+ + ++IPV+ANG + I D
Sbjct: 253 GKKFRADWSAIKEVKNAMRIPVLANGNVRCIED 285
>DICTYBASE|DDB_G0278803 [details] [associations]
symbol:dus1l "tRNA-dihydrouridine synthase 1-like
protein" species:44689 "Dictyostelium discoideum" [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA;ISS] [GO:0008033
"tRNA processing" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0002943 "tRNA dihydrouridine synthesis"
evidence=IEA;ISS] [GO:0006400 "tRNA modification" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136
dictyBase:DDB_G0278803 GO:GO:0005634 Gene3D:3.20.20.70
GenomeReviews:CM000152_GR GO:GO:0050660 EMBL:AAFI02000024
eggNOG:COG0042 KO:K05542 GO:GO:0017150 PANTHER:PTHR11082
RefSeq:XP_641974.1 ProteinModelPortal:Q54XQ6 STRING:Q54XQ6
EnsemblProtists:DDB0238071 GeneID:8621706 KEGG:ddi:DDB_G0278803
OMA:QIARRGN Uniprot:Q54XQ6
Length = 435
Score = 295 (108.9 bits), Expect = 4.3e-26, P = 4.3e-26
Identities = 78/220 (35%), Positives = 117/220 (53%)
Query: 26 NINYSNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFV 85
N+ S K +APMV L FR+L YGAD+VY+ + K T + D+
Sbjct: 47 NVLKSPKKTVAPMVDHTFLAFRMLCRKYGADMVYTP-MFHSKNFATCKTYRR-----DY- 99
Query: 86 DPLDGSVVFRTCPREKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGG 145
+ TCP ++ +++Q +PE ++AAK +E AID+N+GCP+Q + G
Sbjct: 100 --------WSTCPEDR-PLVVQFCGNEPEWVVKAAKYIEDHCDAIDLNLGCPQQIARRGN 150
Query: 146 MGAALLSTPDIACNILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGR 205
G+ LL P I I+ L ++ +P+ CKIR+ N DTI L +L+ G + +HGR
Sbjct: 151 YGSFLLDKPHIILPIVQELHKHIKVPIFCKIRLLPNLDDTIKLALQLQEAGCQLLTIHGR 210
Query: 206 TKAERPRHRNRI---EMIRTLTQHLKIPVIANGGSKEIVD 242
TK E+ H + I + IRT+ + L IPVIANG + D
Sbjct: 211 TK-EQKGHNSGIANWKAIRTIREQLSIPVIANGSVVQYED 249
>UNIPROTKB|I3L1K5 [details] [associations]
symbol:DUS2L "tRNA-dihydrouridine(20) synthase
[NAD(P)+]-like" species:9606 "Homo sapiens" [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
Gene3D:3.20.20.70 GO:GO:0050660 EMBL:AC130462 EMBL:AC040162
GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082 HGNC:HGNC:26014
Ensembl:ENST00000571081 Uniprot:I3L1K5
Length = 89
Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 52/87 (59%), Positives = 71/87 (81%)
Query: 23 NQANINYSNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTI 82
N ++ Y NK+ILAPMVR+ TLP RLLALDYGAD+VY EEL+D K+++ +R VN++L+T+
Sbjct: 4 NSLSLCYHNKLILAPMVRVGTLPMRLLALDYGADIVYCEELIDLKMIQCKRVVNEVLSTV 63
Query: 83 DFVDPLDGSVVFRTCPREKNKIILQIG 109
DFV P D VVFRTC RE+N+++ Q+G
Sbjct: 64 DFVAP-DDRVVFRTCEREQNRVVFQMG 89
>FB|FBgn0031238 [details] [associations]
symbol:CG3645 species:7227 "Drosophila melanogaster"
[GO:0008033 "tRNA processing" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136
EMBL:AE014134 Gene3D:3.20.20.70 GO:GO:0050660 eggNOG:COG0042
KO:K05542 OMA:WEMAEEY GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
GeneTree:ENSGT00550000075089 EMBL:AY051946 EMBL:BT124833
RefSeq:NP_608507.1 RefSeq:NP_722619.1 UniGene:Dm.4432 SMR:Q9VPM1
IntAct:Q9VPM1 MINT:MINT-325917 STRING:Q9VPM1
EnsemblMetazoa:FBtr0078140 EnsemblMetazoa:FBtr0078141 GeneID:33190
KEGG:dme:Dmel_CG3645 UCSC:CG3645-RA FlyBase:FBgn0031238
InParanoid:Q9VPM1 OrthoDB:EOG41VHJ8 GenomeRNAi:33190 NextBio:782335
Uniprot:Q9VPM1
Length = 505
Score = 274 (101.5 bits), Expect = 2.7e-23, P = 2.7e-23
Identities = 70/208 (33%), Positives = 112/208 (53%)
Query: 30 SNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLD 89
S + ++APMV + L +R+L YGA+L YS + L T+ K D L
Sbjct: 27 SPRYVVAPMVDQSELAWRMLCRRYGAELCYSP-MYHANLFATDPKYRK--------DAL- 76
Query: 90 GSVVFRTCPREKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAA 149
+TCP ++ +I+Q D ++ L+AA + A+DIN+GCP+ + G G+
Sbjct: 77 -----QTCPEDR-PLIIQFCGNDAQQILDAALLAQDHCDAVDINLGCPQAIAKRGHYGSF 130
Query: 150 LLSTPDIACNILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAE 209
L ++ I++TL + L++PV+CKIR+F + TI K LEA G + VHGRT+ +
Sbjct: 131 LQDEWELLTEIVSTLHAKLAVPVTCKIRIFEDLEKTIRYAKMLEAAGCQLLTVHGRTREQ 190
Query: 210 RPRHRN--RIEMIRTLTQHLKIPVIANG 235
+ I+ + QH+KIP++ANG
Sbjct: 191 KGPLTGVANWNYIKNVRQHIKIPMLANG 218
>DICTYBASE|DDB_G0291360 [details] [associations]
symbol:dus4l "tRNA-dihydrouridine synthase 4-like
protein" species:44689 "Dictyostelium discoideum" [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA;ISS] [GO:0008033
"tRNA processing" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0002943 "tRNA dihydrouridine synthesis"
evidence=IEA;ISS] [GO:0006400 "tRNA modification" evidence=ISS]
[GO:0005739 "mitochondrion" evidence=ISS] [GO:0016491
"oxidoreductase activity" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207
PIRSF:PIRSF006621 PROSITE:PS01136 dictyBase:DDB_G0291360
GO:GO:0005739 EMBL:AAFI02000177 GenomeReviews:CM000155_GR
Gene3D:3.20.20.70 GO:GO:0050660 eggNOG:COG0042 GO:GO:0017150
PANTHER:PTHR11082 KO:K05545 OMA:AGPMVRY RefSeq:XP_635163.1
ProteinModelPortal:Q54ES7 STRING:Q54ES7 EnsemblProtists:DDB0238074
GeneID:8628109 KEGG:ddi:DDB_G0291360 ProtClustDB:CLSZ2429554
Uniprot:Q54ES7
Length = 344
Score = 268 (99.4 bits), Expect = 2.9e-23, P = 2.9e-23
Identities = 69/203 (33%), Positives = 109/203 (53%)
Query: 34 ILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDF-VDPLDGSV 92
I APMVR + LPFR+L +G D+ Y+ ++ + ++E + DF ++ LD
Sbjct: 58 IQAPMVRFSRLPFRMLVKKWGCDITYTPMIMAAEFNRSEAARDS-----DFTINKLD--- 109
Query: 93 VFRTCPREKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLS 152
+I+Q G + E + AA+KV+ IDIN GCP+++ + G GA LL
Sbjct: 110 ---------EPLIVQFGVNNAEELVSAAEKVKDYCQGIDINCGCPQRWVMKEGFGANLLL 160
Query: 153 TPDIACNILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPR 212
P+ +++ + + + IP+S KIRV + DTI L KR E G+ I VHGRT A +
Sbjct: 161 HPERIYDMVKQINNRVPIPISIKIRVQSDLKDTIELAKRAERIGVSWITVHGRTSAMKSS 220
Query: 213 HRNRIEMIRTLTQHLKIPVIANG 235
H + I+ + ++ +PV ANG
Sbjct: 221 HPVDYDAIKLVKDNVTLPVFANG 243
>RGD|1311445 [details] [associations]
symbol:Dus4l "dihydrouridine synthase 4-like (S. cerevisiae)"
species:10116 "Rattus norvegicus" [GO:0017150 "tRNA dihydrouridine
synthase activity" evidence=IEA] [GO:0050660 "flavin adenine
dinucleotide binding" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207
PIRSF:PIRSF006621 PROSITE:PS01136 RGD:1311445 Gene3D:3.20.20.70
GO:GO:0050660 GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
IPI:IPI00914747 ProteinModelPortal:D4A3L7
Ensembl:ENSRNOT00000011068 UCSC:RGD:1311445 ArrayExpress:D4A3L7
Uniprot:D4A3L7
Length = 324
Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 72/221 (32%), Positives = 116/221 (52%)
Query: 34 ILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDGSVV 93
+ APMVR + L FR L Y DL Y+ +V V++ K D T + D
Sbjct: 30 VCAPMVRYSKLAFRTLVRKYSCDLCYTPMIVAADFVRSV-KARDSEFTTNQGD------- 81
Query: 94 FRTCPREKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLST 153
CP +I+Q D +AA V + IDIN GCP+++++ G GA L++
Sbjct: 82 ---CP-----LIVQFAANDARLLSDAALIVCPYASGIDINCGCPQRWAMADGYGACLINK 133
Query: 154 PDIACNILTTL---ISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAER 210
P++ +++ + + N VS KIR+ + A TI LC+++EA G+ I VHGRT ER
Sbjct: 134 PELVLDMVRQVRNRVENPRFSVSIKIRIHDDLARTIDLCRKVEATGVSWITVHGRTVEER 193
Query: 211 --PRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSL 249
P H + I+MI+ +++ IP++ANG + + + V+ +
Sbjct: 194 HQPVHYDAIKMIK---ENVSIPIVANGDIRSLKEAENVWQM 231
>UNIPROTKB|D4A0T1 [details] [associations]
symbol:Dus4l "Protein Dus4l" species:10116 "Rattus
norvegicus" [GO:0017150 "tRNA dihydrouridine synthase activity"
evidence=IEA] [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136
RGD:1311445 Gene3D:3.20.20.70 GO:GO:0050660 EMBL:CH473947
GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082 CTD:11062 KO:K05545
OrthoDB:EOG4ZCT4T GeneTree:ENSGT00550000074907 IPI:IPI00951041
RefSeq:NP_001129275.1 UniGene:Rn.41975 Ensembl:ENSRNOT00000068419
GeneID:366593 KEGG:rno:366593 NextBio:689691 Uniprot:D4A0T1
Length = 321
Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 72/221 (32%), Positives = 116/221 (52%)
Query: 34 ILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDGSVV 93
+ APMVR + L FR L Y DL Y+ +V V++ K D T + D
Sbjct: 30 VCAPMVRYSKLAFRTLVRKYSCDLCYTPMIVAADFVRSV-KARDSEFTTNQGD------- 81
Query: 94 FRTCPREKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLST 153
CP +I+Q D +AA V + IDIN GCP+++++ G GA L++
Sbjct: 82 ---CP-----LIVQFAANDARLLSDAALIVCPYASGIDINCGCPQRWAMADGYGACLINK 133
Query: 154 PDIACNILTTL---ISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAER 210
P++ +++ + + N VS KIR+ + A TI LC+++EA G+ I VHGRT ER
Sbjct: 134 PELVLDMVRQVRNRVENPRFSVSIKIRIHDDLARTIDLCRKVEATGVSWITVHGRTVEER 193
Query: 211 --PRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSL 249
P H + I+MI+ +++ IP++ANG + + + V+ +
Sbjct: 194 HQPVHYDAIKMIK---ENVSIPIVANGDIRSLKEAENVWQM 231
>UNIPROTKB|Q3A9L8 [details] [associations]
symbol:CHY_2369 "tRNA-dihydrouridine synthase"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001269
InterPro:IPR004652 InterPro:IPR013785 InterPro:IPR018517
InterPro:IPR024036 Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136
Gene3D:3.20.20.70 GO:GO:0050660 EMBL:CP000141
GenomeReviews:CP000141_GR eggNOG:COG0042 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 OMA:VTDQPFR Gene3D:1.10.1200.80
TIGRFAMs:TIGR00737 RefSeq:YP_361166.1 ProteinModelPortal:Q3A9L8
STRING:Q3A9L8 GeneID:3727443 KEGG:chy:CHY_2369 PATRIC:21277805
HOGENOM:HOG000217853 BioCyc:CHYD246194:GJCN-2368-MONOMER
Uniprot:Q3A9L8
Length = 321
Score = 257 (95.5 bits), Expect = 4.3e-22, P = 4.3e-22
Identities = 78/235 (33%), Positives = 121/235 (51%)
Query: 21 NANQANINYSNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLN 80
+A + I N +I+APM + FRL+ +GA L +E + D L+ K +++
Sbjct: 2 SATRREIKLKNPVIVAPMAGVTDKAFRLICQSFGAGLTVTEMINDLALLHGNSKTRQMID 61
Query: 81 TIDFVDPLDGSVVFRTCPREKNKIILQIGTADPERALEAAKKVEHDVAA-IDINMGCPKQ 139
L G + P + +QI + PE+ EAA+ VE A+ IDINMGCP
Sbjct: 62 -------LQGEAM----P-----VAVQIFGSSPEKMAEAARIVEEAGASMIDINMGCPAP 105
Query: 140 FSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRV-FH-NEADTIALCKRLEACGI 197
+ G GAAL+ P++A I+ + + +S+PVS KIR F N + I +R+EA G
Sbjct: 106 KIVKNGEGAALMLKPELAEKIVMAVKNAVSVPVSVKIRKGFDDNTVNAIEFAQRMEAAGA 165
Query: 198 IAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGG------SKEIVDYGGV 246
I VHGRT+ + + E+IR + Q +K+ V NG +KE+++ GV
Sbjct: 166 DLITVHGRTREQFYSGKADWEIIRRVKQAVKVKVAGNGDVDSPQKAKEMLELTGV 220
>TIGR_CMR|CHY_2369 [details] [associations]
symbol:CHY_2369 "putative TIM-barrel protein, NifR3
family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001269
InterPro:IPR004652 InterPro:IPR013785 InterPro:IPR018517
InterPro:IPR024036 Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136
Gene3D:3.20.20.70 GO:GO:0050660 EMBL:CP000141
GenomeReviews:CP000141_GR eggNOG:COG0042 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 OMA:VTDQPFR Gene3D:1.10.1200.80
TIGRFAMs:TIGR00737 RefSeq:YP_361166.1 ProteinModelPortal:Q3A9L8
STRING:Q3A9L8 GeneID:3727443 KEGG:chy:CHY_2369 PATRIC:21277805
HOGENOM:HOG000217853 BioCyc:CHYD246194:GJCN-2368-MONOMER
Uniprot:Q3A9L8
Length = 321
Score = 257 (95.5 bits), Expect = 4.3e-22, P = 4.3e-22
Identities = 78/235 (33%), Positives = 121/235 (51%)
Query: 21 NANQANINYSNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLN 80
+A + I N +I+APM + FRL+ +GA L +E + D L+ K +++
Sbjct: 2 SATRREIKLKNPVIVAPMAGVTDKAFRLICQSFGAGLTVTEMINDLALLHGNSKTRQMID 61
Query: 81 TIDFVDPLDGSVVFRTCPREKNKIILQIGTADPERALEAAKKVEHDVAA-IDINMGCPKQ 139
L G + P + +QI + PE+ EAA+ VE A+ IDINMGCP
Sbjct: 62 -------LQGEAM----P-----VAVQIFGSSPEKMAEAARIVEEAGASMIDINMGCPAP 105
Query: 140 FSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRV-FH-NEADTIALCKRLEACGI 197
+ G GAAL+ P++A I+ + + +S+PVS KIR F N + I +R+EA G
Sbjct: 106 KIVKNGEGAALMLKPELAEKIVMAVKNAVSVPVSVKIRKGFDDNTVNAIEFAQRMEAAGA 165
Query: 198 IAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGG------SKEIVDYGGV 246
I VHGRT+ + + E+IR + Q +K+ V NG +KE+++ GV
Sbjct: 166 DLITVHGRTREQFYSGKADWEIIRRVKQAVKVKVAGNGDVDSPQKAKEMLELTGV 220
>UNIPROTKB|H3BMK6 [details] [associations]
symbol:DUS2L "tRNA-dihydrouridine(20) synthase
[NAD(P)+]-like" species:9606 "Homo sapiens" [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
GO:GO:0005739 Gene3D:3.20.20.70 GO:GO:0050660 EMBL:AC130462
EMBL:AC040162 GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
HGNC:HGNC:26014 Ensembl:ENST00000567100 Bgee:H3BMK6 Uniprot:H3BMK6
Length = 81
Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
Identities = 49/79 (62%), Positives = 64/79 (81%)
Query: 23 NQANINYSNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTI 82
N ++ Y NK+ILAPMVR+ TLP RLLALDYGAD+VY EEL+D K+++ +R VN++L+T+
Sbjct: 4 NSLSLCYHNKLILAPMVRVGTLPMRLLALDYGADIVYCEELIDLKMIQCKRVVNEVLSTV 63
Query: 83 DFVDPLDGSVVFRTCPREK 101
DFV P D VVFRTC RE+
Sbjct: 64 DFVAP-DDRVVFRTCEREQ 81
>UNIPROTKB|I3LP14 [details] [associations]
symbol:DUS4L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] [GO:0017150 "tRNA dihydrouridine synthase activity"
evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136 Gene3D:3.20.20.70
GO:GO:0050660 GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
GeneTree:ENSGT00550000074907 OMA:YLENEHK EMBL:FP565643
Ensembl:ENSSSCT00000023658 Uniprot:I3LP14
Length = 237
Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 76/247 (30%), Positives = 124/247 (50%)
Query: 10 LVKIFYVLDMANANQANINYSNKII--LAPMVRMNTLPFRLLALDYGADLVYSEELVDHK 67
+ +I++ ++ I YS +++ APMVR + L FR L Y DL Y+ +V
Sbjct: 6 ITRIWHEERRITKDEIGICYSGQLVKVCAPMVRYSKLAFRTLVRKYSCDLCYTPMIVAAD 65
Query: 68 LVKTERKVNDLLNTIDFVDPLDGSVVFRTCPREKNKIILQIGTADPERALEAAKKVEHDV 127
V++ K D T + D CP +I+Q D +AA+ V
Sbjct: 66 FVRSV-KARDSEFTTNQGD----------CP-----LIVQFAANDARLLSDAARIVCPYA 109
Query: 128 AAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTL---ISNLSIPVSCKIRVFHNEAD 184
IDIN GCP++++L G GA L++ P++ +++ + + N VS KIR+ +
Sbjct: 110 NGIDINCGCPQRWALAEGYGACLINKPELVKDMVKQVRNQVENPRFSVSIKIRIHSDLTR 169
Query: 185 TIALCKRLEACGIIAIGVHGRTKAER--PRHRNRIEMIRTLTQHLKIPVIANGGSKEIVD 242
T+ LC++ EA G+ I VHGRT ER P H I++I+ + + IPVIANG + + +
Sbjct: 170 TVDLCRKAEATGVSWITVHGRTVEERHQPVHYEAIKIIK---ESMSIPVIANGDIRSLKE 226
Query: 243 YGGVFSL 249
V+ +
Sbjct: 227 AENVWHM 233
>UNIPROTKB|E2RRJ8 [details] [associations]
symbol:DUS4L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] [GO:0017150 "tRNA dihydrouridine synthase activity"
evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136
Gene3D:3.20.20.70 GO:GO:0050660 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 CTD:11062 KO:K05545 OMA:AGPMVRY
GeneTree:ENSGT00550000074907 EMBL:AAEX03011212 RefSeq:XP_540383.2
Ensembl:ENSCAFT00000006298 GeneID:483264 KEGG:cfa:483264
Uniprot:E2RRJ8
Length = 317
Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 73/221 (33%), Positives = 114/221 (51%)
Query: 34 ILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDGSVV 93
+ APMVR + L FR L YG DL Y+ +V V++ K D T + D
Sbjct: 30 VCAPMVRYSKLAFRTLVRKYGCDLCYTPMIVAADFVRSI-KARDSEFTTNQGD------- 81
Query: 94 FRTCPREKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLST 153
CP +I+Q D +AA+ V IDIN GCP+++++ G GA L++
Sbjct: 82 ---CP-----LIVQFAANDARLLSDAARIVCPYANGIDINCGCPQRWAMAEGYGACLINK 133
Query: 154 PDIACNILTTL---ISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAER 210
P++ +++ + + N VS KIR+ + TI LC++ EA G+ I VHGRT ER
Sbjct: 134 PELVRDMVKQVRNQVENPRFSVSIKIRIHDDLTRTIDLCRKAEATGVSWITVHGRTVEER 193
Query: 211 --PRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSL 249
P H I++I+ +++ IPVIANG + + + V+ +
Sbjct: 194 HQPVHYEAIKIIK---ENMSIPVIANGDIRSLKEAENVWHI 231
>MGI|MGI:1919166 [details] [associations]
symbol:Dus4l "dihydrouridine synthase 4-like (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008033 "tRNA processing" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0017150
"tRNA dihydrouridine synthase activity" evidence=IEA] [GO:0050660
"flavin adenine dinucleotide binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207
PIRSF:PIRSF006621 PROSITE:PS01136 MGI:MGI:1919166 Gene3D:3.20.20.70
GO:GO:0050660 eggNOG:COG0042 HOGENOM:HOG000203649 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 CTD:11062 HOVERGEN:HBG053313
KO:K05545 OrthoDB:EOG4ZCT4T EMBL:AK010138 EMBL:BC109351
IPI:IPI00109359 RefSeq:NP_082278.1 UniGene:Mm.62979
ProteinModelPortal:Q32M08 SMR:Q32M08 STRING:Q32M08 PRIDE:Q32M08
Ensembl:ENSMUST00000020977 GeneID:71916 KEGG:mmu:71916
UCSC:uc007nhr.1 GeneTree:ENSGT00550000074907 InParanoid:Q32M08
NextBio:334944 Bgee:Q32M08 CleanEx:MM_DUS4L Genevestigator:Q32M08
GermOnline:ENSMUSG00000020648 Uniprot:Q32M08
Length = 324
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 71/221 (32%), Positives = 115/221 (52%)
Query: 34 ILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDGSVV 93
+ APMVR + L FR L Y DL Y+ ++ V++ K D T + D
Sbjct: 30 VCAPMVRYSKLAFRTLVRKYSCDLCYTPMIIAADFVRSI-KARDSEFTTNQGD------- 81
Query: 94 FRTCPREKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLST 153
CP +I+Q D +AA V IDIN GCP+++++ G GA L++
Sbjct: 82 ---CP-----LIVQFAANDARLLSDAALLVCPYANGIDINCGCPQRWAMADGYGACLINK 133
Query: 154 PDIACNILTTLISNLSIP---VSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAER 210
P++ +++ + + + P VS KIR+ + A TI LC++ EA G+ I VHGRT ER
Sbjct: 134 PELVHDMVRQVRNRVESPRFSVSIKIRIHDDLARTIDLCRKAEATGVSWITVHGRTVEER 193
Query: 211 --PRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSL 249
P H + I+MI+ +++ IP++ANG + + + V+ +
Sbjct: 194 HQPVHYDAIKMIK---ENVSIPIVANGDIRSLKEAENVWQM 231
>UNIPROTKB|F1NHN2 [details] [associations]
symbol:DUS4L "tRNA-dihydrouridine synthase" species:9031
"Gallus gallus" [GO:0017150 "tRNA dihydrouridine synthase activity"
evidence=IEA] [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136
Gene3D:3.20.20.70 GO:GO:0050660 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 OMA:AGPMVRY GeneTree:ENSGT00550000074907
EMBL:AC147596 IPI:IPI00813011 Ensembl:ENSGALT00000039460
Uniprot:F1NHN2
Length = 307
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 74/224 (33%), Positives = 113/224 (50%)
Query: 34 ILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDGSVV 93
I APMVR + L FR L YG DL Y+ +V V++ K D +F
Sbjct: 18 ICAPMVRYSKLAFRTLVRRYGCDLCYTPMVVAADFVRSA-KARDS----EF--------- 63
Query: 94 FRTCPREKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLST 153
T R N +I+Q + + +AA V +D+N GCP+++++ G GA L++
Sbjct: 64 --TTNRGDNPLIVQFAAKEAQVLCDAALLVCPFADGVDLNCGCPQRWAMAEGYGACLINK 121
Query: 154 PDIACNILTTL---ISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAER 210
P++ +++ + I N VS KIR+ + T+ LCK+ EA G+ I VHGR ER
Sbjct: 122 PELVRDMVRHVRNQIDNPRFSVSIKIRIHEDLKKTVDLCKKAEATGVSWITVHGRNIEER 181
Query: 211 --PRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSLNCA 252
P H + I++I+ + + IPV+ANG K + D V L A
Sbjct: 182 HQPVHYDAIKVIK---ESIHIPVVANGDIKTLKDAENVHHLTGA 222
>UNIPROTKB|O95620 [details] [associations]
symbol:DUS4L "tRNA-dihydrouridine(20a/20b) synthase
[NAD(P)+]-like" species:9606 "Homo sapiens" [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207
PIRSF:PIRSF006621 PROSITE:PS01136 Gene3D:3.20.20.70 GO:GO:0050660
EMBL:CH471070 eggNOG:COG0042 HOGENOM:HOG000203649 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 EMBL:U62767 EMBL:AK297195
EMBL:BC111774 IPI:IPI00021410 IPI:IPI00783809 RefSeq:NP_001257348.1
RefSeq:NP_853559.1 UniGene:Hs.97627 ProteinModelPortal:O95620
SMR:O95620 STRING:O95620 PaxDb:O95620 PRIDE:O95620
Ensembl:ENST00000265720 Ensembl:ENST00000402620 GeneID:11062
KEGG:hsa:11062 UCSC:uc003veh.3 CTD:11062 GeneCards:GC07P107203
HGNC:HGNC:21517 HPA:HPA044301 neXtProt:NX_O95620
PharmGKB:PA142671939 HOVERGEN:HBG053313 InParanoid:O95620 KO:K05545
OMA:AGPMVRY OrthoDB:EOG4ZCT4T PhylomeDB:O95620 GenomeRNAi:11062
NextBio:42037 ArrayExpress:O95620 Bgee:O95620 CleanEx:HS_DUS4L
Genevestigator:O95620 GermOnline:ENSG00000105865 Uniprot:O95620
Length = 317
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 72/221 (32%), Positives = 115/221 (52%)
Query: 34 ILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDGSVV 93
+ APMVR + L FR L Y DL Y+ +V VK+ K D T + D
Sbjct: 30 VCAPMVRYSKLAFRTLVRKYSCDLCYTPMIVAADFVKSI-KARDSEFTTNQGD------- 81
Query: 94 FRTCPREKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLST 153
CP +I+Q D +AA+ V IDIN GCP+++++ G GA L++
Sbjct: 82 ---CP-----LIVQFAANDARLLSDAARIVCPYANGIDINCGCPQRWAMAEGYGACLINK 133
Query: 154 PDIACNILTTLISNLSIP---VSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAER 210
P++ +++ + + + P VS KIR+ + T+ LC++ EA G+ I VHGRT ER
Sbjct: 134 PELVQDMVKQVRNQVETPGFSVSIKIRIHDDLKRTVDLCQKAEATGVSWITVHGRTAEER 193
Query: 211 --PRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSL 249
P H + I++I+ +++ IPVIANG + + + V+ +
Sbjct: 194 HQPVHYDSIKIIK---ENMSIPVIANGDIRSLKEAENVWRI 231
>UNIPROTKB|P0ABT5 [details] [associations]
symbol:dusB "tRNA-dihydrouridine synthase B" species:83333
"Escherichia coli K-12" [GO:0050660 "flavin adenine dinucleotide
binding" evidence=IEA] [GO:0002943 "tRNA dihydrouridine synthesis"
evidence=IEA;IMP] [GO:0017150 "tRNA dihydrouridine synthase
activity" evidence=IEA;IMP] [GO:0055114 "oxidation-reduction
process" evidence=IEA] InterPro:IPR001269 InterPro:IPR004652
InterPro:IPR013785 InterPro:IPR018517 InterPro:IPR024036
Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136 Gene3D:3.20.20.70
GO:GO:0050660 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR EMBL:U18997 eggNOG:COG0042 GO:GO:0017150
PANTHER:PTHR11082 EMBL:X62399 EMBL:M95784 EMBL:S67010 EMBL:J03816
EMBL:J03245 PIR:B47043 RefSeq:NP_417726.1 RefSeq:YP_491442.1
ProteinModelPortal:P0ABT5 SMR:P0ABT5 DIP:DIP-48240N IntAct:P0ABT5
EnsemblBacteria:EBESCT00000004917 EnsemblBacteria:EBESCT00000016888
GeneID:12932871 GeneID:947707 KEGG:ecj:Y75_p3178 KEGG:eco:b3260
PATRIC:32121950 EchoBASE:EB1287 EcoGene:EG11311
HOGENOM:HOG000217855 KO:K05540 OMA:VTDQPFR ProtClustDB:PRK10415
BioCyc:EcoCyc:EG11311-MONOMER BioCyc:ECOL316407:JW3228-MONOMER
BioCyc:MetaCyc:EG11311-MONOMER Genevestigator:P0ABT5
Gene3D:1.10.1200.80 TIGRFAMs:TIGR00737 Uniprot:P0ABT5
Length = 321
Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 78/230 (33%), Positives = 114/230 (49%)
Query: 31 NKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDG 90
N++I APM + PFR L + GA L SE + + V K L + +P G
Sbjct: 10 NRLIAAPMAGITDRPFRTLCYEMGAGLTVSEMMSSNPQVWESDKSR--LRMVHIDEP--G 65
Query: 91 SVVFRTCPREKNKIILQIGTADPERALEAAK-KVEHDVAAIDINMGCPKQFSLTGGMGAA 149
RT +QI +DP+ +AA+ VE IDINMGCP + G+A
Sbjct: 66 ---IRT---------VQIAGSDPKEMADAARINVESGAQIIDINMGCPAKKVNRKLAGSA 113
Query: 150 LLSTPDIACNILTTLISNLSIPVSCKIRVF----HNEADTIALCKRLEACGIIAIGVHGR 205
LL PD+ +ILT +++ + +PV+ KIR H + IA + E CGI A+ +HGR
Sbjct: 114 LLQYPDVVKSILTEVVNAVDVPVTLKIRTGWAPEHRNCEEIA--QLAEDCGIQALTIHGR 171
Query: 206 TKAERPRHRNRIEMIRTLTQHLKIPVIANGG------SKEIVDYGGVFSL 249
T+A + IR + Q + IPVIANG ++ ++DY G +L
Sbjct: 172 TRACLFNGEAEYDSIRAVKQKVSIPVIANGDITDPLKARAVLDYTGADAL 221
>ZFIN|ZDB-GENE-040801-233 [details] [associations]
symbol:dus4l "dihydrouridine synthase 4-like (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0050660 "flavin adenine
dinucleotide binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0008033 "tRNA
processing" evidence=IEA] [GO:0017150 "tRNA dihydrouridine synthase
activity" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016491 "oxidoreductase activity" evidence=IEA]
InterPro:IPR001269 InterPro:IPR013785 InterPro:IPR018517
Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136
ZFIN:ZDB-GENE-040801-233 Gene3D:3.20.20.70 GO:GO:0050660
HOGENOM:HOG000203649 GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
CTD:11062 HOVERGEN:HBG053313 KO:K05545 OMA:AGPMVRY
GeneTree:ENSGT00550000074907 EMBL:BX072538 IPI:IPI00487005
RefSeq:NP_001003490.2 UniGene:Dr.89736 Ensembl:ENSDART00000130623
GeneID:445096 KEGG:dre:445096 InParanoid:Q5RIX6 NextBio:20831860
Uniprot:Q5RIX6
Length = 307
Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 68/221 (30%), Positives = 112/221 (50%)
Query: 34 ILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDGSVV 93
+ APMVR + L FR L Y D+ ++ ++ +++ K D +F
Sbjct: 19 VCAPMVRYSKLAFRTLVRKYDCDVCFTPMIIAADFMRSA-KARDS----EF--------- 64
Query: 94 FRTCPREKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLST 153
T + +I+Q D + +AA V +D+N GCP++++++ G GA L++
Sbjct: 65 --TTNKNDRPLIVQFAAKDAQTLADAACVVSPFSDGVDLNCGCPQRWAMSEGYGACLINK 122
Query: 154 PDIACNILTTL---ISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAER 210
P++ +++ + I N + VS KIR+ + T+ LC+++EA G+ I VHGRT ER
Sbjct: 123 PELVKDMVRHVRNQIDNPNYAVSIKIRIHKDVRQTVDLCQKVEAAGVSYITVHGRTAIER 182
Query: 211 --PRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSL 249
P H + I+T+ L IPVIANG K + D V L
Sbjct: 183 HQPVH---YDTIKTIKDSLSIPVIANGDIKSMQDVEAVCEL 220
>UNIPROTKB|A6QPA8 [details] [associations]
symbol:DUS4L "DUS4L protein" species:9913 "Bos taurus"
[GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA]
[GO:0017150 "tRNA dihydrouridine synthase activity" evidence=IEA]
InterPro:IPR001269 InterPro:IPR013785 InterPro:IPR018517
Pfam:PF01207 PROSITE:PS01136 Gene3D:3.20.20.70 GO:GO:0050660
eggNOG:COG0042 HOGENOM:HOG000203649 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 CTD:11062 HOVERGEN:HBG053313 KO:K05545
OrthoDB:EOG4ZCT4T GeneTree:ENSGT00550000074907 EMBL:DAAA02010587
EMBL:BC149229 IPI:IPI00866854 RefSeq:NP_001095407.1
UniGene:Bt.13512 STRING:A6QPA8 Ensembl:ENSBTAT00000029128
GeneID:511017 KEGG:bta:511017 InParanoid:A6QPA8 OMA:YLENEHK
NextBio:20869728 Uniprot:A6QPA8
Length = 238
Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 71/219 (32%), Positives = 111/219 (50%)
Query: 34 ILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDGSVV 93
I APMVR + L FR L Y DL Y+ +V V++ K D T + D
Sbjct: 30 ICAPMVRYSKLSFRTLVRKYDCDLCYTPMIVAADFVRSA-KARDSEFTTNQGD------- 81
Query: 94 FRTCPREKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLST 153
CP +I+Q D +AA+ V IDIN GCP++++L G GA L++
Sbjct: 82 ---CP-----LIVQFAANDARLLSDAARIVCPYANGIDINCGCPQRWALAEGYGACLINK 133
Query: 154 PDIACNILTTL---ISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAER 210
P++ +++ + + N VS KIR+ + T+ LC++ EA G+ I VHGRT ER
Sbjct: 134 PELVRDMVKQVRNQVENPRFSVSIKIRIHDDLTRTVDLCRKAEATGVSWITVHGRTVEER 193
Query: 211 --PRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVF 247
P H I++I+ + + IP++ANG + + + V+
Sbjct: 194 HQPVHYEAIKIIK---ESMSIPIVANGDIRSLKEAENVW 229
>TIGR_CMR|NSE_0373 [details] [associations]
symbol:NSE_0373 "putative tRNA-dihydrouridine synthase"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0006400
"tRNA modification" evidence=ISS] [GO:0017150 "tRNA dihydrouridine
synthase activity" evidence=ISS] InterPro:IPR001269
InterPro:IPR004652 InterPro:IPR013785 InterPro:IPR018517
InterPro:IPR024036 Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136
Gene3D:3.20.20.70 GO:GO:0050660 EMBL:CP000237
GenomeReviews:CP000237_GR eggNOG:COG0042 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 HOGENOM:HOG000217855 KO:K05540
Gene3D:1.10.1200.80 TIGRFAMs:TIGR00737 RefSeq:YP_506262.1
ProteinModelPortal:Q2GE34 STRING:Q2GE34 GeneID:3932261
KEGG:nse:NSE_0373 PATRIC:22680819 OMA:ECAKEHL
ProtClustDB:CLSK2527833 BioCyc:NSEN222891:GHFU-398-MONOMER
Uniprot:Q2GE34
Length = 331
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 74/221 (33%), Positives = 108/221 (48%)
Query: 26 NINYSNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFV 85
NI+ N +ILAPM + +P+R L +GA LV SE + ++ K D + +
Sbjct: 8 NISIDN-VILAPMSGVTDMPYRDLVKSFGAGLVVSEMIASRAMIL---KTKDTMKKVSL- 62
Query: 86 DPLDGSVVFRTCPREKNKIILQIGTADPERALEAAKKVEHDVAA--IDINMGCPKQFSLT 143
PRE I Q+ +P+ EAAK + D+ A IDIN GCP + +
Sbjct: 63 -----------SPREDITAI-QLAGFEPDVMAEAAK-INEDMGAKIIDINFGCPVKKVVN 109
Query: 144 GGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVF--HNEADTIALCKRLEACGIIAIG 201
G G+ L+ A IL + + IPV+ K+R N + L K E GI I
Sbjct: 110 GYAGSYLMKDECHAAKILEATVKAVKIPVTLKMRTGWDENHRNAPKLAKIAEDLGIKMIT 169
Query: 202 VHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVD 242
+HGRT+A+ + ++ + IRT+ +KIPVIANG K D
Sbjct: 170 IHGRTRAQMYKGKSDWQFIRTVKNTVKIPVIANGDIKTYED 210
>UNIPROTKB|Q9KV66 [details] [associations]
symbol:dusB "tRNA-dihydrouridine synthase B" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001269
InterPro:IPR004652 InterPro:IPR013785 InterPro:IPR018517
InterPro:IPR024036 Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136
Gene3D:3.20.20.70 GO:GO:0050660 EMBL:AE003852
GenomeReviews:AE003852_GR eggNOG:COG0042 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 KO:K05540 OMA:VTDQPFR
Gene3D:1.10.1200.80 TIGRFAMs:TIGR00737 PIR:B82341
RefSeq:NP_229946.1 ProteinModelPortal:Q9KV66 DNASU:2615014
GeneID:2615014 KEGG:vch:VC0291 PATRIC:20079629
ProtClustDB:CLSK873929 Uniprot:Q9KV66
Length = 322
Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 69/214 (32%), Positives = 111/214 (51%)
Query: 26 NINYSNKIILAPMVRMNTLPFRLLALDYGADLVYSEEL-VDHKLVKTERKVNDLLNTIDF 84
N N +I+APM + PFR L L YGA + SE + + L KT + N +++
Sbjct: 5 NYQLKNNLIVAPMAGVTDRPFRELCLRYGAGMAVSEMMSCNPALWKTAKSQNRMVH---- 60
Query: 85 VDPLDGSVVFRTCPREKNKIILQIGTADPERALEAAK-KVEHDVAAIDINMGCPKQFSLT 143
+G R+ +QI +DP+ EAA+ VE+ IDINMGCP +
Sbjct: 61 ----EGESGIRS---------VQIAGSDPQLMAEAAQFSVENGAQIIDINMGCPAKKVNK 107
Query: 144 GGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFHN--EADTIALCKRLEACGIIAIG 201
G+ALL PD+ +IL +++ +++PV+ K R + + +++ + E CGI A+
Sbjct: 108 KLAGSALLRYPDVIEDILKAVVNAVNVPVTLKTRTGWDTDNKNCLSIAQLAEDCGIQALA 167
Query: 202 VHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANG 235
+HGRT+A + + I+ + + IPVIANG
Sbjct: 168 LHGRTRACMYKGEAEYDSIKAVKAAVSIPVIANG 201
>TIGR_CMR|VC_0291 [details] [associations]
symbol:VC_0291 "NifR3/Smm1 family protein" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001269 InterPro:IPR004652
InterPro:IPR013785 InterPro:IPR018517 InterPro:IPR024036
Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136 Gene3D:3.20.20.70
GO:GO:0050660 EMBL:AE003852 GenomeReviews:AE003852_GR
eggNOG:COG0042 GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
KO:K05540 OMA:VTDQPFR Gene3D:1.10.1200.80 TIGRFAMs:TIGR00737
PIR:B82341 RefSeq:NP_229946.1 ProteinModelPortal:Q9KV66
DNASU:2615014 GeneID:2615014 KEGG:vch:VC0291 PATRIC:20079629
ProtClustDB:CLSK873929 Uniprot:Q9KV66
Length = 322
Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 69/214 (32%), Positives = 111/214 (51%)
Query: 26 NINYSNKIILAPMVRMNTLPFRLLALDYGADLVYSEEL-VDHKLVKTERKVNDLLNTIDF 84
N N +I+APM + PFR L L YGA + SE + + L KT + N +++
Sbjct: 5 NYQLKNNLIVAPMAGVTDRPFRELCLRYGAGMAVSEMMSCNPALWKTAKSQNRMVH---- 60
Query: 85 VDPLDGSVVFRTCPREKNKIILQIGTADPERALEAAK-KVEHDVAAIDINMGCPKQFSLT 143
+G R+ +QI +DP+ EAA+ VE+ IDINMGCP +
Sbjct: 61 ----EGESGIRS---------VQIAGSDPQLMAEAAQFSVENGAQIIDINMGCPAKKVNK 107
Query: 144 GGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFHN--EADTIALCKRLEACGIIAIG 201
G+ALL PD+ +IL +++ +++PV+ K R + + +++ + E CGI A+
Sbjct: 108 KLAGSALLRYPDVIEDILKAVVNAVNVPVTLKTRTGWDTDNKNCLSIAQLAEDCGIQALA 167
Query: 202 VHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANG 235
+HGRT+A + + I+ + + IPVIANG
Sbjct: 168 LHGRTRACMYKGEAEYDSIKAVKAAVSIPVIANG 201
>SGD|S000004545 [details] [associations]
symbol:DUS1 "Dihydrouridine synthase" species:4932
"Saccharomyces cerevisiae" [GO:0017150 "tRNA dihydrouridine
synthase activity" evidence=IEA;IDA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] [GO:0006400 "tRNA modification" evidence=IMP;IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0002943 "tRNA
dihydrouridine synthesis" evidence=IEA] [GO:0008033 "tRNA
processing" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136 SGD:S000004545
GO:GO:0005634 Gene3D:3.20.20.70 GO:GO:0050660 EMBL:BK006946
EMBL:Z46373 eggNOG:COG0042 HOGENOM:HOG000203649 KO:K05542
GO:GO:0017150 PANTHER:PTHR11082 GeneTree:ENSGT00550000075089
OMA:RCQPYFR OrthoDB:EOG480N5B PIR:S48817 RefSeq:NP_013631.1
ProteinModelPortal:P53759 SMR:P53759 IntAct:P53759
MINT:MINT-4083769 STRING:P53759 PaxDb:P53759 PeptideAtlas:P53759
EnsemblFungi:YML080W GeneID:854895 KEGG:sce:YML080W CYGD:YML080w
BioCyc:MetaCyc:MONOMER-16676 NextBio:977861 Genevestigator:P53759
GermOnline:YML080W Uniprot:P53759
Length = 423
Score = 240 (89.5 bits), Expect = 7.9e-20, P = 7.9e-20
Identities = 69/206 (33%), Positives = 107/206 (51%)
Query: 34 ILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDGSVV 93
I+APMV + L +R+L+ YGA L Y+ ++ KL T +K + D LDGS V
Sbjct: 32 IVAPMVDQSELAWRILSRRYGATLAYTP-MLHAKLFATSKKYRE-----DNWSSLDGSSV 85
Query: 94 FRTCPREKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLST 153
R P +++Q DPE L AAK VE A+D+N+GCP+ + G G+ L+
Sbjct: 86 DR--P-----LVVQFCANDPEYLLAAAKLVEDKCDAVDLNLGCPQGIAKKGHYGSFLMEE 138
Query: 154 PDIACNILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRH 213
D+ N++ TL NL +PV+ KIR+F + ++ K + G + VHGR + ++ +
Sbjct: 139 WDLIHNLINTLHKNLKVPVTAKIRIFDDCEKSLNYAKMVLDAGAQFLTVHGRVREQKGQK 198
Query: 214 RNRI--EMIRTLTQHLKIPVI--ANG 235
E I+ L +L + ANG
Sbjct: 199 TGLANWETIKYLRDNLPKETVFFANG 224
>CGD|CAL0004455 [details] [associations]
symbol:orf19.1404 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006400 "tRNA modification" evidence=IEA] [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136
CGD:CAL0004455 Gene3D:3.20.20.70 GO:GO:0050660 EMBL:AACQ01000101
EMBL:AACQ01000099 eggNOG:COG0042 HOGENOM:HOG000203649 KO:K05542
GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082 RefSeq:XP_714575.1
RefSeq:XP_714669.1 ProteinModelPortal:Q59YC2 STRING:Q59YC2
GeneID:3643687 GeneID:3643817 KEGG:cal:CaO19.1404
KEGG:cal:CaO19.8982 Uniprot:Q59YC2
Length = 467
Score = 241 (89.9 bits), Expect = 9.0e-20, P = 9.0e-20
Identities = 61/176 (34%), Positives = 98/176 (55%)
Query: 32 KIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDGS 91
K I+APMV + L +R+L+ YGA L Y+ + KL T+ K + + T + LDG+
Sbjct: 59 KTIVAPMVDQSELAWRILSRRYGAQLCYTP-MFHAKLFATQEKYRNSMWTTN----LDGN 113
Query: 92 VVFRTCPREKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALL 151
+ R +++Q DP+ L+AAK +E++ AID+N+GCP+ + G GA L+
Sbjct: 114 ---KDLDRP---LVVQFCANDPDYLLQAAKLIENECDAIDLNLGCPQGIARKGKYGAFLM 167
Query: 152 STPDIACNILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTK 207
D+ ++ L NLSIPV+ KIR++ + ++ K + G I VHGRT+
Sbjct: 168 DDWDLVYKLIKNLHDNLSIPVTAKIRIYDDYEKSLKYAKMVLDAGAQFITVHGRTR 223
>UNIPROTKB|Q8EJR8 [details] [associations]
symbol:dusB "tRNA-dihydrouridine synthase B" species:211586
"Shewanella oneidensis MR-1" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001269
InterPro:IPR004652 InterPro:IPR013785 InterPro:IPR018517
InterPro:IPR024036 Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136
Gene3D:3.20.20.70 GO:GO:0050660 EMBL:AE014299
GenomeReviews:AE014299_GR eggNOG:COG0042 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 HOGENOM:HOG000217855 KO:K05540
OMA:VTDQPFR Gene3D:1.10.1200.80 TIGRFAMs:TIGR00737
RefSeq:NP_716032.1 ProteinModelPortal:Q8EJR8 GeneID:1168271
KEGG:son:SO_0394 PATRIC:23520491 ProtClustDB:CLSK905725
Uniprot:Q8EJR8
Length = 322
Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 75/228 (32%), Positives = 116/228 (50%)
Query: 31 NKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDG 90
N++I+APM + FR L L YGA L SE ++ + +V D D
Sbjct: 10 NQLIVAPMAGVTDQAFRNLCLRYGAALAVSE------MLSSNPEVWDT----------DK 53
Query: 91 SVVFRTCPREKNKIILQIGTADPERALEAAK-KVEHDVAAIDINMGCPKQFSLTGGMGAA 149
S T E+ +QI ADPE +AA+ VE IDINMGCP + G+A
Sbjct: 54 SRQRMTHSGEEGIRSVQIAGADPELMAQAAQFNVEQGAHIIDINMGCPAKKVNKKLAGSA 113
Query: 150 LLSTPDIACNILTTLISNLSIPVSCKIRV-FHNE-ADTIALCKRLEACGIIAIGVHGRTK 207
L+ P + +IL +++ + +PV+ KIR + E + + + + E CGI ++ VHGRT+
Sbjct: 114 LMQNPPLVKDILQAVVAAVDVPVTLKIRTGWEPEHRNGVQIAQIAEDCGIASLAVHGRTR 173
Query: 208 AERPRHRNRIEMIRTLTQHLKIPVIANGG--SKE----IVDYGGVFSL 249
+ + I+ + Q++ IPV+ANG S E ++DY GV +L
Sbjct: 174 QCMYKGNAEYDTIKAIKQNVSIPVVANGDIDSPEKARFVLDYTGVDAL 221
>TIGR_CMR|SO_0394 [details] [associations]
symbol:SO_0394 "conserved hypothetical protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001269 InterPro:IPR004652 InterPro:IPR013785
InterPro:IPR018517 InterPro:IPR024036 Pfam:PF01207
PIRSF:PIRSF006621 PROSITE:PS01136 Gene3D:3.20.20.70 GO:GO:0050660
EMBL:AE014299 GenomeReviews:AE014299_GR eggNOG:COG0042
GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082 HOGENOM:HOG000217855
KO:K05540 OMA:VTDQPFR Gene3D:1.10.1200.80 TIGRFAMs:TIGR00737
RefSeq:NP_716032.1 ProteinModelPortal:Q8EJR8 GeneID:1168271
KEGG:son:SO_0394 PATRIC:23520491 ProtClustDB:CLSK905725
Uniprot:Q8EJR8
Length = 322
Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 75/228 (32%), Positives = 116/228 (50%)
Query: 31 NKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDG 90
N++I+APM + FR L L YGA L SE ++ + +V D D
Sbjct: 10 NQLIVAPMAGVTDQAFRNLCLRYGAALAVSE------MLSSNPEVWDT----------DK 53
Query: 91 SVVFRTCPREKNKIILQIGTADPERALEAAK-KVEHDVAAIDINMGCPKQFSLTGGMGAA 149
S T E+ +QI ADPE +AA+ VE IDINMGCP + G+A
Sbjct: 54 SRQRMTHSGEEGIRSVQIAGADPELMAQAAQFNVEQGAHIIDINMGCPAKKVNKKLAGSA 113
Query: 150 LLSTPDIACNILTTLISNLSIPVSCKIRV-FHNE-ADTIALCKRLEACGIIAIGVHGRTK 207
L+ P + +IL +++ + +PV+ KIR + E + + + + E CGI ++ VHGRT+
Sbjct: 114 LMQNPPLVKDILQAVVAAVDVPVTLKIRTGWEPEHRNGVQIAQIAEDCGIASLAVHGRTR 173
Query: 208 AERPRHRNRIEMIRTLTQHLKIPVIANGG--SKE----IVDYGGVFSL 249
+ + I+ + Q++ IPV+ANG S E ++DY GV +L
Sbjct: 174 QCMYKGNAEYDTIKAIKQNVSIPVVANGDIDSPEKARFVLDYTGVDAL 221
>WB|WBGene00016674 [details] [associations]
symbol:C45G9.2 species:6239 "Caenorhabditis elegans"
[GO:0008033 "tRNA processing" evidence=IEA] [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207
PIRSF:PIRSF006621 PROSITE:PS01136 Gene3D:3.20.20.70 GO:GO:0050660
eggNOG:COG0042 HOGENOM:HOG000203649 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 KO:K05545 OMA:AGPMVRY
GeneTree:ENSGT00550000074907 EMBL:FO080873 PIR:A88449
RefSeq:NP_498078.2 ProteinModelPortal:Q09504 SMR:Q09504
STRING:Q09504 EnsemblMetazoa:C45G9.2 GeneID:183479
KEGG:cel:CELE_C45G9.2 UCSC:C45G9.2 CTD:183479 WormBase:C45G9.2
InParanoid:Q09504 NextBio:921288 Uniprot:Q09504
Length = 284
Score = 233 (87.1 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 62/202 (30%), Positives = 103/202 (50%)
Query: 38 MVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDGSVVFRTC 97
MVR + L FR L Y D+ ++ + +++E+ + L+ + PL
Sbjct: 1 MVRYSKLAFRQLVRVYDVDVCFTPMIYAKNFIESEKCRSSELSVCEGDSPL--------- 51
Query: 98 PREKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIA 157
I+Q T DP EAA+ V +D+N GCPK + G G+ALLS P++
Sbjct: 52 -------IVQFATDDPFVLSEAAEMVYKCSTGVDLNCGCPKHDVRSKGFGSALLSKPELL 104
Query: 158 CNILTTLISNLSIP---VSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHR 214
+++ + + P VS KIR+ H+ T+ LC++ EA G+ + VHGRT ++R
Sbjct: 105 ADMVRQTRARIPDPDFSVSLKIRINHDIEKTVDLCRKAEAAGVTHLTVHGRTPSQRAEPI 164
Query: 215 NRIEMIRTLTQHLKIPVIANGG 236
+ I+ +R + + +P+IANGG
Sbjct: 165 D-IQALRIVKDSVSVPIIANGG 185
>POMBASE|SPBC36B7.04 [details] [associations]
symbol:SPBC36B7.04 "tRNA dihydrouridine synthase Dus1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0006400 "tRNA modification" evidence=ISO]
[GO:0017150 "tRNA dihydrouridine synthase activity" evidence=ISO]
[GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA]
InterPro:IPR001269 InterPro:IPR013785 InterPro:IPR018517
Pfam:PF01207 PROSITE:PS01136 PomBase:SPBC36B7.04 GO:GO:0005739
GO:GO:0005634 Gene3D:3.20.20.70 GO:GO:0050660 EMBL:CU329671
GenomeReviews:CU329671_GR eggNOG:COG0042 HOGENOM:HOG000203649
KO:K05542 GO:GO:0017150 PANTHER:PTHR11082 RefSeq:NP_595986.1
ProteinModelPortal:Q9HGN6 STRING:Q9HGN6 EnsemblFungi:SPBC36B7.04.1
GeneID:2541048 KEGG:spo:SPBC36B7.04 OMA:RCQPYFR OrthoDB:EOG480N5B
NextBio:20802162 Uniprot:Q9HGN6
Length = 399
Score = 233 (87.1 bits), Expect = 3.7e-19, P = 3.7e-19
Identities = 72/209 (34%), Positives = 106/209 (50%)
Query: 32 KIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDGS 91
K ILAPMV + LP+R+LA GADL YS ++E N + +T
Sbjct: 19 KRILAPMVDQSELPWRILARRSGADLCYSPMFHSRLFGESEDYRNKVFST---------- 68
Query: 92 VVFRTCPREKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALL 151
RT P E+ +I+Q DPE L+AAK A+D+N+GCP+ + G G+ L
Sbjct: 69 ---RTIPEER-PLIIQFCGNDPEIMLKAAKIAAPYCDAVDVNLGCPQGIAKKGKYGSFLQ 124
Query: 152 STPDIACNILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERP 211
++ +I+T L + LSIPV+ KIR+F + T+ K + G + VHGR + E+
Sbjct: 125 ENWNLIESIITKLHTELSIPVTAKIRIFPDPQKTLDYAKMILKAGASILAVHGRLR-EQK 183
Query: 212 RHRNRI---EMIRTLTQHLKIPVI--ANG 235
H I E I+ L ++L + ANG
Sbjct: 184 GHFTGIADWEQIQMLRKNLPSETVLFANG 212
>RGD|708389 [details] [associations]
symbol:Pp3111 "PP3111 protein" species:10116 "Rattus norvegicus"
[GO:0017150 "tRNA dihydrouridine synthase activity" evidence=IEA]
[GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA]
InterPro:IPR001269 InterPro:IPR013785 InterPro:IPR018517
Pfam:PF01207 PROSITE:PS01136 RGD:708389 Gene3D:3.20.20.70
GO:GO:0050660 HOVERGEN:HBG061241 KO:K05542 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 EMBL:AF508021 EMBL:AY327509
EMBL:AY327510 IPI:IPI00203718 RefSeq:NP_742015.1 UniGene:Rn.179335
ProteinModelPortal:Q8K582 PRIDE:Q8K582 GeneID:246185
KEGG:rno:246185 CTD:246185 NextBio:623466 Genevestigator:Q8K582
Uniprot:Q8K582
Length = 438
Score = 231 (86.4 bits), Expect = 9.1e-19, P = 9.1e-19
Identities = 69/211 (32%), Positives = 105/211 (49%)
Query: 34 ILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDGSVV 93
++APMV + L +RLL+ +GA L Y+ L H V R N + + D
Sbjct: 20 VVAPMVDQSELAWRLLSRRHGAQLCYTPML--HAQVFV-RDANYRKENL-YCD------- 68
Query: 94 FRTCPREKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLST 153
CP ++ +I+Q DPE ++AA + AID+N+GCP+ + G GA L
Sbjct: 69 --VCPEDR-PLIVQFCANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGRYGAFLQEE 125
Query: 154 PDIACNILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAER-PR 212
D+ ++ LS+PV+CKIRVF T+ + LE G + VHGRTK ++ P
Sbjct: 126 WDLLQRMILLAHERLSVPVTCKIRVFPEIDKTVRYAQMLEKAGCQLLTVHGRTKEQKGPM 185
Query: 213 HRNRI-EMIRTLTQHLKIPVIANGGSKEIVD 242
E I+ + + + IPV ANG + + D
Sbjct: 186 AGTASWEHIKAVRKAVGIPVFANGNIRCLQD 216
>UNIPROTKB|J3QLE4 [details] [associations]
symbol:DUS1L "tRNA-dihydrouridine(16/17) synthase
[NAD(P)(+)]-like" species:9606 "Homo sapiens" [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207
PIRSF:PIRSF006621 PROSITE:PS01136 Gene3D:3.20.20.70 GO:GO:0050660
EMBL:AC135056 HGNC:HGNC:30086 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 Ensembl:ENST00000582529 Uniprot:J3QLE4
Length = 309
Score = 225 (84.3 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 67/213 (31%), Positives = 103/213 (48%)
Query: 34 ILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTE--RKVNDLLNTIDFVDPLDGS 91
++APMV + L +RLL+ +GA L Y+ L V+ RK N
Sbjct: 20 VVAPMVDQSELAWRLLSRRHGAQLCYTPMLHAQVFVRDANYRKEN--------------- 64
Query: 92 VVFRTCPREKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALL 151
+ CP ++ +I+Q DPE ++AA + AID+N+GCP+ + G GA L
Sbjct: 65 LYCEVCPEDR-PLIVQFCANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFLQ 123
Query: 152 STPDIACNILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERP 211
D+ ++ LS+PV+CKIRVF T+ + LE G + VHGRTK ++
Sbjct: 124 DEWDLLQRMILLAHEKLSVPVTCKIRVFPEIDKTVRYAQMLEKAGCQLLTVHGRTKEQKG 183
Query: 212 RHRNRI--EMIRTLTQHLKIPVIANGGSKEIVD 242
E I+ + + + IPV ANG + + D
Sbjct: 184 PLSGAASWEHIKAVRKAVAIPVFANGNIQCLQD 216
>UNIPROTKB|J3QQZ0 [details] [associations]
symbol:DUS1L "tRNA-dihydrouridine(16/17) synthase
[NAD(P)(+)]-like" species:9606 "Homo sapiens" [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207
PIRSF:PIRSF006621 PROSITE:PS01136 Gene3D:3.20.20.70 GO:GO:0050660
EMBL:AC135056 HGNC:HGNC:30086 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 Ensembl:ENST00000578907 Uniprot:J3QQZ0
Length = 301
Score = 225 (84.3 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 67/213 (31%), Positives = 103/213 (48%)
Query: 34 ILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTE--RKVNDLLNTIDFVDPLDGS 91
++APMV + L +RLL+ +GA L Y+ L V+ RK N
Sbjct: 20 VVAPMVDQSELAWRLLSRRHGAQLCYTPMLHAQVFVRDANYRKEN--------------- 64
Query: 92 VVFRTCPREKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALL 151
+ CP ++ +I+Q DPE ++AA + AID+N+GCP+ + G GA L
Sbjct: 65 LYCEVCPEDR-PLIVQFCANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFLQ 123
Query: 152 STPDIACNILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERP 211
D+ ++ LS+PV+CKIRVF T+ + LE G + VHGRTK ++
Sbjct: 124 DEWDLLQRMILLAHEKLSVPVTCKIRVFPEIDKTVRYAQMLEKAGCQLLTVHGRTKEQKG 183
Query: 212 RHRNRI--EMIRTLTQHLKIPVIANGGSKEIVD 242
E I+ + + + IPV ANG + + D
Sbjct: 184 PLSGAASWEHIKAVRKAVAIPVFANGNIQCLQD 216
>MGI|MGI:1915980 [details] [associations]
symbol:Dus1l "dihydrouridine synthase 1-like (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008033 "tRNA processing" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0017150
"tRNA dihydrouridine synthase activity" evidence=IEA] [GO:0050660
"flavin adenine dinucleotide binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136
MGI:MGI:1915980 Gene3D:3.20.20.70 GO:GO:0050660 CTD:64118
eggNOG:COG0042 HOVERGEN:HBG061241 KO:K05542 OrthoDB:EOG4SN1NJ
GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082 EMBL:AK004041
EMBL:AK088243 EMBL:BC019480 IPI:IPI00224714 RefSeq:NP_081100.2
UniGene:Mm.180622 ProteinModelPortal:Q8C2P3 SMR:Q8C2P3
STRING:Q8C2P3 PRIDE:Q8C2P3 Ensembl:ENSMUST00000167023 GeneID:68730
KEGG:mmu:68730 UCSC:uc007mur.1 GeneTree:ENSGT00550000075089
InParanoid:Q8C2P3 NextBio:327790 Bgee:Q8C2P3 CleanEx:MM_DUS1L
Genevestigator:Q8C2P3 GermOnline:ENSMUSG00000025155 Uniprot:Q8C2P3
Length = 475
Score = 230 (86.0 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 69/211 (32%), Positives = 105/211 (49%)
Query: 34 ILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDGSVV 93
++APMV + L +RLL+ +GA L Y+ L H V R N + + D
Sbjct: 20 VVAPMVDQSELAWRLLSRRHGAQLCYTPML--HAQVFV-RDANYRKENL-YCD------- 68
Query: 94 FRTCPREKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLST 153
CP ++ +I+Q DPE ++AA + AID+N+GCP+ + G GA L
Sbjct: 69 --VCPEDR-PLIVQFCANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFLQEE 125
Query: 154 PDIACNILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAER-PR 212
D+ ++ LS+PV+CKIRVF T+ + LE G + VHGRTK ++ P
Sbjct: 126 WDLLQRMILLAHERLSVPVTCKIRVFPEIDKTVRYAQMLEKAGCQLLTVHGRTKEQKGPM 185
Query: 213 HRNRI-EMIRTLTQHLKIPVIANGGSKEIVD 242
E I+ + + + IPV ANG + + D
Sbjct: 186 AGTASWEHIKAVRKAVGIPVFANGNIQCLQD 216
>UNIPROTKB|Q607L4 [details] [associations]
symbol:MCA1745 "tRNA-dihydrouridine synthase"
species:243233 "Methylococcus capsulatus str. Bath" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001269 InterPro:IPR004652
InterPro:IPR013785 InterPro:IPR018517 InterPro:IPR024036
Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136 Gene3D:3.20.20.70
GO:GO:0050660 EMBL:AE017282 GenomeReviews:AE017282_GR GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 HOGENOM:HOG000217855 KO:K05540
Gene3D:1.10.1200.80 TIGRFAMs:TIGR00737 OMA:PIARKHI
RefSeq:YP_114184.1 ProteinModelPortal:Q607L4 GeneID:3104455
KEGG:mca:MCA1745 PATRIC:22607332 Uniprot:Q607L4
Length = 327
Score = 224 (83.9 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 70/209 (33%), Positives = 102/209 (48%)
Query: 30 SNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLD 89
S+ +ILAPM + LPFR L +GA L SE + ++ RK
Sbjct: 9 SSPVILAPMAGVTDLPFRRLCRQFGAGLAVSEMISASPALQATRK--------------- 53
Query: 90 GSVVFRTCPREKNKIILQIGTADPERALEAAKK-VEHDVAAIDINMGCPKQFSLTGGMGA 148
S + + E I +QI ADP EAA++ V+ IDINMGCP + G+
Sbjct: 54 -SRLRQDHRGEPGPISVQIVGADPREMAEAARRTVDLGADIIDINMGCPAKKVCNVAAGS 112
Query: 149 ALLSTPDIACNILTTLISNLSIPVSCKIRVFHNEA--DTIALCKRLEACGIIAIGVHGRT 206
ALL + NIL ++ + +PV+ KIR + A + +++ K E+ GI A+ VHGRT
Sbjct: 113 ALLRDEKLVANILEAVVQAVPVPVTLKIRTGWDSASRNAVSIGKIAESAGIRALTVHGRT 172
Query: 207 KAERPRHRNRIEMIRTLTQHLKIPVIANG 235
+A I + + + IPVIANG
Sbjct: 173 RACGFAGAAEYSTITEVKKAIGIPVIANG 201
>CGD|CAL0003746 [details] [associations]
symbol:orf19.966 species:5476 "Candida albicans" [GO:0005739
"mitochondrion" evidence=IEA] [GO:0006400 "tRNA modification"
evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136
CGD:CAL0003746 Gene3D:3.20.20.70 GO:GO:0050660 EMBL:AACQ01000063
EMBL:AACQ01000062 eggNOG:COG0042 HOGENOM:HOG000203649 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 KO:K05545 RefSeq:XP_716804.1
RefSeq:XP_716864.1 ProteinModelPortal:Q5A4Y0 STRING:Q5A4Y0
GeneID:3641524 GeneID:3641580 KEGG:cal:CaO19.8581
KEGG:cal:CaO19.966 Uniprot:Q5A4Y0
Length = 339
Score = 224 (83.9 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 68/222 (30%), Positives = 109/222 (49%)
Query: 34 ILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDGSVV 93
I PMVR + LPFR L Y D+VY+ ++ + V+ N++ + DF D
Sbjct: 29 IAGPMVRYSKLPFRELCRFYDVDIVYTPMILAREFVR-----NEVARSTDFTTN-DSD-- 80
Query: 94 FRTCPREKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLST 153
C +I+Q+G + + ++ + + V I IN GCP + + G+GAAL+S
Sbjct: 81 --KC------VIVQVGVNNVDDFMKFIEMIHPFVDGIGINCGCPIKEQVREGIGAALMSD 132
Query: 154 PDIACNILTTLISNL--SIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERP 211
PD+ ++ T SI + KIR+ + TI ++ G + VHGRTK R
Sbjct: 133 PDLVAELIKTAKDKYGDSICIDTKIRIHRDINQTIDFVNKVVEAGTDTLTVHGRTKNTRS 192
Query: 212 RHRNRIEMIRTLTQHLK-IPVIANGGS------KEIVDYGGV 246
++ I+ + +++ IPVIANG ++IVDY GV
Sbjct: 193 SVPVNLDAIKIIRENVTTIPVIANGDCFTLTDFQKIVDYTGV 234
>UNIPROTKB|I3L0K0 [details] [associations]
symbol:DUS2L "tRNA-dihydrouridine(20) synthase
[NAD(P)+]-like" species:9606 "Homo sapiens" [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
GO:GO:0005739 Gene3D:3.20.20.70 GO:GO:0050660 EMBL:AC130462
EMBL:AC040162 GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
HGNC:HGNC:26014 Ensembl:ENST00000576994 Bgee:I3L0K0 Uniprot:I3L0K0
Length = 73
Score = 220 (82.5 bits), Expect = 3.6e-18, P = 3.6e-18
Identities = 43/71 (60%), Positives = 57/71 (80%)
Query: 23 NQANINYSNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTI 82
N ++ Y NK+ILAPMVR+ TLP RLLALDYGAD+VY EEL+D K+++ +R VN++L+T+
Sbjct: 4 NSLSLCYHNKLILAPMVRVGTLPMRLLALDYGADIVYCEELIDLKMIQCKRVVNEVLSTV 63
Query: 83 DFVDPLDGSVV 93
DFV P D VV
Sbjct: 64 DFVAP-DDRVV 73
>UNIPROTKB|E2R9L8 [details] [associations]
symbol:DUS1L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] [GO:0017150 "tRNA dihydrouridine synthase activity"
evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136 Gene3D:3.20.20.70
GO:GO:0050660 CTD:64118 KO:K05542 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 GeneTree:ENSGT00550000075089 EMBL:AAEX03006160
EMBL:AAEX03006161 RefSeq:XP_848227.1 ProteinModelPortal:E2R9L8
Ensembl:ENSCAFT00000009615 GeneID:475927 KEGG:cfa:475927
NextBio:20851671 Uniprot:E2R9L8
Length = 475
Score = 226 (84.6 bits), Expect = 4.2e-18, P = 4.2e-18
Identities = 67/206 (32%), Positives = 101/206 (49%)
Query: 34 ILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTE--RKVNDLLNTIDFVDPLDGS 91
++APMV + L +RLL+ +GA L Y+ L V+ RK N
Sbjct: 20 VVAPMVDQSELAWRLLSRRHGAQLCYTPMLHAQVFVRDANYRKEN--------------- 64
Query: 92 VVFRTCPREKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALL 151
+ CP ++ +I+Q DPE ++AA + AID+N+GCP+ + G GA L
Sbjct: 65 LYCEVCPEDR-PLIVQFCANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFLQ 123
Query: 152 STPDIACNILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAER- 210
D+ ++ LS+PV+CKIRVF T+ + LE G + VHGRTK ++
Sbjct: 124 EEWDLLQRMILLAHEKLSVPVTCKIRVFPEIDKTVKYAQMLEKAGCQLLTVHGRTKEQKG 183
Query: 211 PRHRNRI-EMIRTLTQHLKIPVIANG 235
P E I+ + + + IPV ANG
Sbjct: 184 PLSGTASWEHIKAVRKAVAIPVFANG 209
>UNIPROTKB|Q6P1R4 [details] [associations]
symbol:DUS1L "tRNA-dihydrouridine(16/17) synthase
[NAD(P)(+)]-like" species:9606 "Homo sapiens" [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136
Gene3D:3.20.20.70 GO:GO:0050660 EMBL:AC135056 EMBL:BC017081
EMBL:BC062566 EMBL:BC064918 IPI:IPI00335251 RefSeq:NP_071439.3
UniGene:Hs.514599 UniGene:Hs.741994 ProteinModelPortal:Q6P1R4
SMR:Q6P1R4 STRING:Q6P1R4 DMDM:74749069 PaxDb:Q6P1R4 PRIDE:Q6P1R4
DNASU:64118 Ensembl:ENST00000306796 Ensembl:ENST00000354321
GeneID:64118 KEGG:hsa:64118 UCSC:uc002kdq.3 CTD:64118
GeneCards:GC17M080015 H-InvDB:HIX0039074 HGNC:HGNC:30086
HPA:HPA023384 neXtProt:NX_Q6P1R4 PharmGKB:PA142671936
eggNOG:COG0042 HOGENOM:HOG000203649 HOVERGEN:HBG061241
InParanoid:Q6P1R4 KO:K05542 OMA:WEMAEEY OrthoDB:EOG4SN1NJ
GenomeRNAi:64118 NextBio:65992 ArrayExpress:Q6P1R4 Bgee:Q6P1R4
CleanEx:HS_DUS1L Genevestigator:Q6P1R4 GermOnline:ENSG00000169718
GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082 Uniprot:Q6P1R4
Length = 473
Score = 225 (84.3 bits), Expect = 5.3e-18, P = 5.3e-18
Identities = 67/213 (31%), Positives = 103/213 (48%)
Query: 34 ILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTE--RKVNDLLNTIDFVDPLDGS 91
++APMV + L +RLL+ +GA L Y+ L V+ RK N
Sbjct: 20 VVAPMVDQSELAWRLLSRRHGAQLCYTPMLHAQVFVRDANYRKEN--------------- 64
Query: 92 VVFRTCPREKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALL 151
+ CP ++ +I+Q DPE ++AA + AID+N+GCP+ + G GA L
Sbjct: 65 LYCEVCPEDR-PLIVQFCANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFLQ 123
Query: 152 STPDIACNILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERP 211
D+ ++ LS+PV+CKIRVF T+ + LE G + VHGRTK ++
Sbjct: 124 DEWDLLQRMILLAHEKLSVPVTCKIRVFPEIDKTVRYAQMLEKAGCQLLTVHGRTKEQKG 183
Query: 212 RHRNRI--EMIRTLTQHLKIPVIANGGSKEIVD 242
E I+ + + + IPV ANG + + D
Sbjct: 184 PLSGAASWEHIKAVRKAVAIPVFANGNIQCLQD 216
>UNIPROTKB|J9NYR0 [details] [associations]
symbol:DUS1L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] [GO:0017150 "tRNA dihydrouridine synthase activity"
evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136 Gene3D:3.20.20.70
GO:GO:0050660 OMA:WEMAEEY GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 GeneTree:ENSGT00550000075089 EMBL:AAEX03006160
EMBL:AAEX03006161 Ensembl:ENSCAFT00000045880 Uniprot:J9NYR0
Length = 584
Score = 226 (84.6 bits), Expect = 6.9e-18, P = 6.9e-18
Identities = 67/206 (32%), Positives = 101/206 (49%)
Query: 34 ILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTE--RKVNDLLNTIDFVDPLDGS 91
++APMV + L +RLL+ +GA L Y+ L V+ RK N
Sbjct: 20 VVAPMVDQSELAWRLLSRRHGAQLCYTPMLHAQVFVRDANYRKEN--------------- 64
Query: 92 VVFRTCPREKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALL 151
+ CP ++ +I+Q DPE ++AA + AID+N+GCP+ + G GA L
Sbjct: 65 LYCEVCPEDR-PLIVQFCANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFLQ 123
Query: 152 STPDIACNILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAER- 210
D+ ++ LS+PV+CKIRVF T+ + LE G + VHGRTK ++
Sbjct: 124 EEWDLLQRMILLAHEKLSVPVTCKIRVFPEIDKTVKYAQMLEKAGCQLLTVHGRTKEQKG 183
Query: 211 PRHRNRI-EMIRTLTQHLKIPVIANG 235
P E I+ + + + IPV ANG
Sbjct: 184 PLSGTASWEHIKAVRKAVAIPVFANG 209
>UNIPROTKB|E1BH75 [details] [associations]
symbol:DUS1L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] [GO:0017150 "tRNA dihydrouridine synthase activity"
evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136 Gene3D:3.20.20.70
GO:GO:0050660 GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
GeneTree:ENSGT00550000075089 EMBL:DAAA02049400 EMBL:DAAA02049401
IPI:IPI00906369 Ensembl:ENSBTAT00000057257 OMA:RMSILAW
Uniprot:E1BH75
Length = 270
Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
Identities = 67/204 (32%), Positives = 100/204 (49%)
Query: 34 ILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDGSVV 93
++APMV + L +RLL+ +GA L Y+ L H V R N + + D
Sbjct: 20 VVAPMVDQSELAWRLLSRRHGAHLCYTPML--HAQVFV-RDANYRKENL-YCD------- 68
Query: 94 FRTCPREKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLST 153
CP ++ +I+Q DPE ++AA + AID+N+GCP+ + G GA L
Sbjct: 69 --VCPEDR-PLIVQFCANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFLQEE 125
Query: 154 PDIACNILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAER-PR 212
D+ + + S PV+CKIRVF T+ + LE G + VHGRTK ++ P
Sbjct: 126 WDLLQRMSILAWTTSSXPVTCKIRVFPEIDKTVRYAQMLEKAGCQLLTVHGRTKEQKGPL 185
Query: 213 HRNRI-EMIRTLTQHLKIPVIANG 235
E I+ + + + IPV ANG
Sbjct: 186 SGTASWEHIKAVRKAVTIPVFANG 209
>UNIPROTKB|Q81VW4 [details] [associations]
symbol:BA_0075 "tRNA-dihydrouridine synthase" species:1392
"Bacillus anthracis" [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001269 InterPro:IPR004652 InterPro:IPR013785
InterPro:IPR018517 InterPro:IPR024036 Pfam:PF01207
PIRSF:PIRSF006621 PROSITE:PS01136 Gene3D:3.20.20.70 GO:GO:0050660
EMBL:AE016879 GenomeReviews:AE016879_GR GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 Gene3D:1.10.1200.80 TIGRFAMs:TIGR00737
HOGENOM:HOG000217853 RefSeq:NP_842644.2 ProteinModelPortal:Q81VW4
IntAct:Q81VW4 DNASU:1087319 EnsemblBacteria:EBBACT00000009344
GeneID:1087319 KEGG:ban:BA_0075 PATRIC:18777630
ProtClustDB:CLSK872617 Uniprot:Q81VW4
Length = 339
Score = 222 (83.2 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 66/215 (30%), Positives = 107/215 (49%)
Query: 25 ANINYSNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDF 84
ANI N ++LAPM + FRL ++GA LV +E + D ++ ++ D+L +
Sbjct: 12 ANIEMKNPVVLAPMAGVCNSAFRLTVKEFGAGLVCAEMVSDKAILLNNKRTLDML----Y 67
Query: 85 VDPLDGSVVFRTCPREKNKIILQIGTADPERALEAAKKVEHDVAA--IDINMGCPKQFSL 142
+D REK + LQI + E ++AAK V+ A IDINMGCP +
Sbjct: 68 IDE-----------REK-PLSLQIFGGEKETLVDAAKYVDQYTTADIIDINMGCPVPKIV 115
Query: 143 TGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFHNEADTIAL--CKRLEACGIIAI 200
GA L P+ ++ ++ + PV+ K+R+ +E A+ K +E G +
Sbjct: 116 KCDAGAKWLLDPNKIYEMVAAVVDAVEKPVTVKMRIGWDEDHIFAIENAKAVERAGGQVV 175
Query: 201 GVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANG 235
VHGRT+ + + ++I+ + Q + IPVI NG
Sbjct: 176 AVHGRTRVQMYEGKADWDIIKQVKQAVNIPVIGNG 210
>TIGR_CMR|BA_0075 [details] [associations]
symbol:BA_0075 "TIM-barrel protein, putative, NifR3 family"
species:198094 "Bacillus anthracis str. Ames" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001269 InterPro:IPR004652
InterPro:IPR013785 InterPro:IPR018517 InterPro:IPR024036
Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136 Gene3D:3.20.20.70
GO:GO:0050660 EMBL:AE016879 GenomeReviews:AE016879_GR GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 Gene3D:1.10.1200.80
TIGRFAMs:TIGR00737 HOGENOM:HOG000217853 RefSeq:NP_842644.2
ProteinModelPortal:Q81VW4 IntAct:Q81VW4 DNASU:1087319
EnsemblBacteria:EBBACT00000009344 GeneID:1087319 KEGG:ban:BA_0075
PATRIC:18777630 ProtClustDB:CLSK872617 Uniprot:Q81VW4
Length = 339
Score = 222 (83.2 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 66/215 (30%), Positives = 107/215 (49%)
Query: 25 ANINYSNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDF 84
ANI N ++LAPM + FRL ++GA LV +E + D ++ ++ D+L +
Sbjct: 12 ANIEMKNPVVLAPMAGVCNSAFRLTVKEFGAGLVCAEMVSDKAILLNNKRTLDML----Y 67
Query: 85 VDPLDGSVVFRTCPREKNKIILQIGTADPERALEAAKKVEHDVAA--IDINMGCPKQFSL 142
+D REK + LQI + E ++AAK V+ A IDINMGCP +
Sbjct: 68 IDE-----------REK-PLSLQIFGGEKETLVDAAKYVDQYTTADIIDINMGCPVPKIV 115
Query: 143 TGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFHNEADTIAL--CKRLEACGIIAI 200
GA L P+ ++ ++ + PV+ K+R+ +E A+ K +E G +
Sbjct: 116 KCDAGAKWLLDPNKIYEMVAAVVDAVEKPVTVKMRIGWDEDHIFAIENAKAVERAGGQVV 175
Query: 201 GVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANG 235
VHGRT+ + + ++I+ + Q + IPVI NG
Sbjct: 176 AVHGRTRVQMYEGKADWDIIKQVKQAVNIPVIGNG 210
>UNIPROTKB|Q87VS1 [details] [associations]
symbol:dusB "tRNA-dihydrouridine synthase B" species:223283
"Pseudomonas syringae pv. tomato str. DC3000" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001269 InterPro:IPR004652
InterPro:IPR013785 InterPro:IPR018517 InterPro:IPR024036
Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136 Gene3D:3.20.20.70
GO:GO:0050660 EMBL:AE016853 GenomeReviews:AE016853_GR
eggNOG:COG0042 GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
HOGENOM:HOG000217855 KO:K05540 OMA:VTDQPFR Gene3D:1.10.1200.80
TIGRFAMs:TIGR00737 RefSeq:NP_794598.1 ProteinModelPortal:Q87VS1
GeneID:1186547 KEGG:pst:PSPTO_4864 PATRIC:20001236
ProtClustDB:CLSK868944 BioCyc:PSYR223283:GJIX-4930-MONOMER
Uniprot:Q87VS1
Length = 337
Score = 221 (82.9 bits), Expect = 1.9e-17, P = 1.9e-17
Identities = 69/208 (33%), Positives = 97/208 (46%)
Query: 31 NKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDG 90
N +ILAPM + PFR L GA LV SE + + RK L I DP
Sbjct: 13 NGLILAPMAGVTDQPFRQLCRQLGAGLVVSEMVTSDMSLWNSRKSR--LRMIHAGDPE-- 68
Query: 91 SVVFRTCPREKNKIILQIGTADPERALEAAK-KVEHDVAAIDINMGCPKQFSLTGGMGAA 149
PR +QI D + +AA+ VE IDINMGCP + G+A
Sbjct: 69 -------PRS-----VQIAGGDAQMMADAARANVELGAQIIDINMGCPAKKVCNKAAGSA 116
Query: 150 LLSTPDIACNILTTLISNLSIPVSCKIRVF--HNEADTIALCKRLEACGIIAIGVHGRTK 207
LL + +IL +++ + +PV+ KIR + + + + K E GI A+ VHGRT+
Sbjct: 117 LLKDEQLVNDILQAVVAAVDVPVTLKIRTGWDRDNRNGLTVAKIAEQAGIQALAVHGRTR 176
Query: 208 AERPRHRNRIEMIRTLTQHLKIPVIANG 235
A+ + I + Q + IPV ANG
Sbjct: 177 ADLYTGEAEYDTIAMIKQAVSIPVFANG 204
>UNIPROTKB|E1C6D2 [details] [associations]
symbol:DUS1L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017150 "tRNA dihydrouridine synthase activity"
evidence=IEA] [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136 Gene3D:3.20.20.70
GO:GO:0050660 GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
GeneTree:ENSGT00550000075089 EMBL:AADN02029975 IPI:IPI00599742
ProteinModelPortal:E1C6D2 Ensembl:ENSGALT00000004402 Uniprot:E1C6D2
Length = 478
Score = 222 (83.2 bits), Expect = 5.8e-17, P = 5.8e-17
Identities = 68/211 (32%), Positives = 103/211 (48%)
Query: 34 ILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDGSVV 93
++APMV + L +RLL+ +GA L Y+ L H V R N L G
Sbjct: 20 VVAPMVDQSELAWRLLSRRHGAQLCYTPML--HAQVFL-RDANYRREN------LYGEA- 69
Query: 94 FRTCPREKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLST 153
CP ++ +I+Q DPE ++AA + AID+N+GCP+ + G GA L
Sbjct: 70 ---CPEDR-PLIVQFCANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFLQEE 125
Query: 154 PDIACNILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRH 213
D+ ++ LS+P++CKIRVF T+ + LE G + VHGRTK ++
Sbjct: 126 WDLLQRMILLANEKLSVPITCKIRVFPEIDKTVKYAQMLEKAGCQLLTVHGRTKEQKGPL 185
Query: 214 RNRI--EMIRTLTQHLKIPVIANGGSKEIVD 242
E I+ + + + IPV ANG + + D
Sbjct: 186 AGVASWEHIQAVRKAVSIPVFANGNIQCLSD 216
>UNIPROTKB|E1BWI8 [details] [associations]
symbol:DUS1L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017150 "tRNA dihydrouridine synthase activity"
evidence=IEA] [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136 Gene3D:3.20.20.70
GO:GO:0050660 OMA:WEMAEEY GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 GeneTree:ENSGT00550000075089 EMBL:AADN02029975
IPI:IPI00820914 ProteinModelPortal:E1BWI8
Ensembl:ENSGALT00000038896 NextBio:20820685 Uniprot:E1BWI8
Length = 486
Score = 222 (83.2 bits), Expect = 6.1e-17, P = 6.1e-17
Identities = 68/211 (32%), Positives = 103/211 (48%)
Query: 34 ILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDGSVV 93
++APMV + L +RLL+ +GA L Y+ L H V R N L G
Sbjct: 20 VVAPMVDQSELAWRLLSRRHGAQLCYTPML--HAQVFL-RDANYRREN------LYGEA- 69
Query: 94 FRTCPREKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLST 153
CP ++ +I+Q DPE ++AA + AID+N+GCP+ + G GA L
Sbjct: 70 ---CPEDR-PLIVQFCANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFLQEE 125
Query: 154 PDIACNILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRH 213
D+ ++ LS+P++CKIRVF T+ + LE G + VHGRTK ++
Sbjct: 126 WDLLQRMILLANEKLSVPITCKIRVFPEIDKTVKYAQMLEKAGCQLLTVHGRTKEQKGPL 185
Query: 214 RNRI--EMIRTLTQHLKIPVIANGGSKEIVD 242
E I+ + + + IPV ANG + + D
Sbjct: 186 AGVASWEHIQAVRKAVSIPVFANGNIQCLSD 216
>SGD|S000004397 [details] [associations]
symbol:DUS4 "Dihydrouridine synthase" species:4932
"Saccharomyces cerevisiae" [GO:0008033 "tRNA processing"
evidence=IEA] [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] [GO:0017150 "tRNA dihydrouridine synthase activity"
evidence=IEA;ISS] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0006400 "tRNA modification" evidence=ISS;IMP] [GO:0002943 "tRNA
dihydrouridine synthesis" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0003824 "catalytic activity"
evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136
SGD:S000004397 Gene3D:3.20.20.70 GO:GO:0050660 EMBL:BK006945
EMBL:U19729 eggNOG:COG0042 HOGENOM:HOG000203649 GO:GO:0017150
PANTHER:PTHR11082 KO:K05545 OMA:AGPMVRY
GeneTree:ENSGT00550000074907 OrthoDB:EOG4PZNGJ EMBL:AY558586
PIR:S55961 RefSeq:NP_013509.1 ProteinModelPortal:Q06063 SMR:Q06063
IntAct:Q06063 STRING:Q06063 PaxDb:Q06063 EnsemblFungi:YLR405W
GeneID:851121 KEGG:sce:YLR405W CYGD:YLR405w
BioCyc:MetaCyc:MONOMER-16679 NextBio:967845 Genevestigator:Q06063
GermOnline:YLR405W Uniprot:Q06063
Length = 367
Score = 218 (81.8 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 59/215 (27%), Positives = 104/215 (48%)
Query: 34 ILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTER-KVNDLLNTIDFVDPLDGSV 92
I PMVR + LPFR L +Y D+VYS ++ + V+ E +++DL
Sbjct: 42 IAGPMVRYSKLPFRQLCREYNVDIVYSPMILAREYVRNEHARISDLSTN----------- 90
Query: 93 VFRTCPREKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLS 152
E +I+Q+G + L+ + V I IN GCP + + G+G AL+
Sbjct: 91 ------NEDTPLIVQVGVNNVADLLKFVEMVAPYCDGIGINCGCPIKEQIREGIGCALIY 144
Query: 153 TPDIACNILTTLISNLS--IPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAER 210
D+ C+++ + + + KIR+ +T+ LC++L G+ I +HGRT+ R
Sbjct: 145 NSDLLCSMVHAVKDKYGDKLRIETKIRIHEALDETVELCRKLCDAGVDWITIHGRTRRTR 204
Query: 211 PRHRNRIEMIRTLTQHLK---IPVIANGGSKEIVD 242
++ I+ + +++ +PVIANG ++ D
Sbjct: 205 SSQPANLDAIKYIIENISDKNVPVIANGDCFKLSD 239
>TIGR_CMR|SPO_2089 [details] [associations]
symbol:SPO_2089 "tRNA-dihydrouridine synthase, putative"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0006400 "tRNA
modification" evidence=ISS] [GO:0017150 "tRNA dihydrouridine
synthase activity" evidence=ISS] InterPro:IPR001269
InterPro:IPR004652 InterPro:IPR013785 InterPro:IPR018517
InterPro:IPR024036 Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136
Gene3D:3.20.20.70 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0050660 GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
HOGENOM:HOG000217855 Gene3D:1.10.1200.80 TIGRFAMs:TIGR00737
OMA:PIARKHI RefSeq:YP_167319.1 ProteinModelPortal:Q5LRN6
GeneID:3193240 KEGG:sil:SPO2089 PATRIC:23377519
ProtClustDB:CLSK2767269 Uniprot:Q5LRN6
Length = 327
Score = 216 (81.1 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 60/206 (29%), Positives = 104/206 (50%)
Query: 33 IILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDGSV 92
+ILAPM + PFR L +++GA +V SE + ++V+ + V + L V
Sbjct: 14 VILAPMAGITDRPFRDLVMEFGAGMVVSEMVASQEMVQAKPGVRERAE-------LSADV 66
Query: 93 VFRTCPREKNKIILQIGTADPERALEAAKKV-EHDVAAIDINMGCPKQFSLTGGMGAALL 151
+N + Q+ D EAA++V + IDINMGCP + G G+ALL
Sbjct: 67 --------ENTAV-QLAGRDTHWIAEAARQVADRGARVIDINMGCPAKKVTNGYSGSALL 117
Query: 152 STPDIACNILTTLISNLSIPVSCKIRVFHNEADTIA--LCKRLEACGIIAIGVHGRTKAE 209
TPD A ++ +++ + +PV+ K R+ ++ A + +R G+ + +HGRT+ +
Sbjct: 118 KTPDHALRLIEAVVAAVDVPVTLKTRLGWDDTLMNAPDVARRAAEAGVRMVTIHGRTRCQ 177
Query: 210 RPRHRNRIEMIRTLTQHLKIPVIANG 235
+ R I + + + +P+IANG
Sbjct: 178 FYKGRADWAAIAAVREAVDVPLIANG 203
>ZFIN|ZDB-GENE-030131-1435 [details] [associations]
symbol:dus1l "dihydrouridine synthase 1-like (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0008033 "tRNA
processing" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001269 InterPro:IPR013785 Pfam:PF01207
ZFIN:ZDB-GENE-030131-1435 Gene3D:3.20.20.70 GO:GO:0050660
GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
GeneTree:ENSGT00550000075089 EMBL:BX897685 IPI:IPI00481340
ProteinModelPortal:F1QQD1 Ensembl:ENSDART00000127028
ArrayExpress:F1QQD1 Bgee:F1QQD1 Uniprot:F1QQD1
Length = 511
Score = 220 (82.5 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 64/213 (30%), Positives = 100/213 (46%)
Query: 32 KIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDGS 91
+ ++APMV + L +RLL+ +GA+L Y+ L H V R N +
Sbjct: 50 RFVVAPMVDQSELAWRLLSRRHGAELCYTPML--HAQVFV-RDANYRRENL--------- 97
Query: 92 VVFRTCPREKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALL 151
+ +E +I Q DPE ++AA + AID+N+GCP+ + G G L
Sbjct: 98 --YSEVNQEDRPLITQFCANDPEVFIQAALLAQDYCDAIDLNLGCPQMIAKRGHYGVFLQ 155
Query: 152 STPDIACNILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERP 211
D+ ++ LS+P++CKIRVF T+ K LE G + VHGRTK ++
Sbjct: 156 DEWDLLEKMIKLANEKLSVPITCKIRVFPEIEKTVKYAKMLEKAGCQLLTVHGRTKDQKG 215
Query: 212 RHRNRIEM--IRTLTQHLKIPVIANGGSKEIVD 242
I+ + + + IPV ANG + + D
Sbjct: 216 ALTGIASWKHIKAVREAVNIPVFANGNIQHLSD 248
>DICTYBASE|DDB_G0292686 [details] [associations]
symbol:dus3l "tRNA-dihydrouridine synthase 3-like
protein" species:44689 "Dictyostelium discoideum" [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA;ISS] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008033 "tRNA processing"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0002943 "tRNA
dihydrouridine synthesis" evidence=IEA;ISS] [GO:0006400 "tRNA
modification" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136 PROSITE:PS50103
SMART:SM00356 dictyBase:DDB_G0292686 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR Gene3D:3.20.20.70 GO:GO:0050660
EMBL:AAFI02000194 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
eggNOG:COG0042 GO:GO:0017150 PANTHER:PTHR11082 RefSeq:XP_629571.1
ProteinModelPortal:Q54CU9 STRING:Q54CU9 EnsemblProtists:DDB0238072
GeneID:8628832 KEGG:ddi:DDB_G0292686 KO:K05544 OMA:WGASAIT
ProtClustDB:CLSZ2495295 Uniprot:Q54CU9
Length = 671
Score = 218 (81.8 bits), Expect = 6.6e-16, P = 6.6e-16
Identities = 69/239 (28%), Positives = 118/239 (49%)
Query: 16 VLDMANANQAN-INYSNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERK 74
++ AN+ IN+ N++ILAP+ + LPFR + GAD+ E + KL++ +
Sbjct: 308 IMTPLKANEKKRINFENQLILAPLTTVGNLPFRRICKRLGADITIGEMALTTKLLEGTKS 367
Query: 75 VNDLLNTIDFVDPLDGSVVFRTCPREKNKIILQIGTADPERALEAAKKVEHDVAA--IDI 132
LL C ++K +QI + + A++ A+ +E+++ A +DI
Sbjct: 368 ELALLKR-------------HPC---EDKFGVQICGSYVDAAVKCAEFIENEIDADFVDI 411
Query: 133 NMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFHNE-ADTI-ALCK 190
N GCP G GAAL+ P +L + S+LS P + KIR+ +E A T L
Sbjct: 412 NSGCPIDLVCNMGAGAALMERPKKVEQLLRGISSSLSCPTTIKIRIGKSEDAPTAHKLIP 471
Query: 191 RLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDYGGVFSL 249
L G A+ +HGR++A+R + ++ ++ IP+I NG +I +Y V ++
Sbjct: 472 SLGEWGACAVTLHGRSRAQRYSRLANWDYVKQCSEVSSIPLIGNG---DIYNYQDVVNI 527
>TIGR_CMR|APH_0575 [details] [associations]
symbol:APH_0575 "putative tRNA-dihydrouridine synthase"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0006400 "tRNA
modification" evidence=ISS] [GO:0017150 "tRNA dihydrouridine
synthase activity" evidence=ISS] InterPro:IPR001269
InterPro:IPR004652 InterPro:IPR013785 InterPro:IPR018517
InterPro:IPR024036 Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136
Gene3D:3.20.20.70 GO:GO:0050660 EMBL:CP000235
GenomeReviews:CP000235_GR eggNOG:COG0042 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 HOGENOM:HOG000217855 KO:K05540
Gene3D:1.10.1200.80 TIGRFAMs:TIGR00737 OMA:PIARKHI
RefSeq:YP_505166.1 ProteinModelPortal:Q2GKD5 STRING:Q2GKD5
GeneID:3930783 KEGG:aph:APH_0575 PATRIC:20949816
ProtClustDB:CLSK2766800 BioCyc:APHA212042:GHPM-599-MONOMER
Uniprot:Q2GKD5
Length = 315
Score = 177 (67.4 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 48/149 (32%), Positives = 81/149 (54%)
Query: 106 LQIGTADPERALEAAKKVEHDVAA--IDINMGCPKQFSLTGGMGAALLSTPDIACNILTT 163
+Q+ PE EAAK + D+ A ID+N GCP + + G G+AL+ IA I+ +
Sbjct: 64 VQLAGCTPEIMAEAAK-INEDLGAKSIDLNFGCPAKKVVDGYAGSALMKDEVIATKIMES 122
Query: 164 LISNLSIPVSCKIRVFHNEADTIA--LCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIR 221
++ + +PV+ K+R+ + + A L K E GI I +HGRT+++ + ++
Sbjct: 123 VVKAVKVPVTVKMRMGWDTTNLNAPTLAKVAEDVGIQMITIHGRTRSQMFSGSADWKFVK 182
Query: 222 TLTQHLKIPVIANGGSKEIVDYGGVFSLN 250
+ + +KIPVI NG + + D V +LN
Sbjct: 183 RVKECVKIPVIVNGDIRTLDDI--VVALN 209
Score = 72 (30.4 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 17/46 (36%), Positives = 25/46 (54%)
Query: 31 NKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLV-KTERKV 75
N +ILAPM + LPFR GA L+ SE + ++ KT + +
Sbjct: 8 NPVILAPMSGVTDLPFRTTVRKLGAGLLISEMVASRAMILKTRQSM 53
>UNIPROTKB|G3N340 [details] [associations]
symbol:DUS1L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] [GO:0017150 "tRNA dihydrouridine synthase activity"
evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136 Gene3D:3.20.20.70
GO:GO:0050660 GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
GeneTree:ENSGT00550000075089 EMBL:DAAA02049400 EMBL:DAAA02049401
Ensembl:ENSBTAT00000063588 Uniprot:G3N340
Length = 475
Score = 212 (79.7 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 67/204 (32%), Positives = 100/204 (49%)
Query: 34 ILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDGSVV 93
++APMV + L +RLL+ +GA L Y+ L H V R N + + D
Sbjct: 20 VVAPMVDQSELAWRLLSRRHGAHLCYTPML--HAQVFV-RDANYRKENL-YCD------- 68
Query: 94 FRTCPREKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLST 153
CP ++ +I+Q DPE ++AA + AID+N+GCP+ + G GA L
Sbjct: 69 --VCPEDR-PLIVQFCANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFLQEE 125
Query: 154 PDIACNILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAER-PR 212
D+ + T + PV+CKIRVF T+ + LE G + VHGRTK ++ P
Sbjct: 126 WDLLQRMRTWGHMVVGCPVTCKIRVFPEIDKTVRYAQMLEKAGCQLLTVHGRTKEQKGPL 185
Query: 213 HRNRI-EMIRTLTQHLKIPVIANG 235
E I+ + + + IPV ANG
Sbjct: 186 SGTASWEHIKAVRKAVTIPVFANG 209
>TIGR_CMR|ECH_0758 [details] [associations]
symbol:ECH_0758 "putative tRNA-dihydrouridine synthase"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0006400
"tRNA modification" evidence=ISS] [GO:0017150 "tRNA dihydrouridine
synthase activity" evidence=ISS] InterPro:IPR001269
InterPro:IPR004652 InterPro:IPR013785 InterPro:IPR018517
InterPro:IPR024036 Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136
Gene3D:3.20.20.70 GO:GO:0050660 EMBL:CP000236
GenomeReviews:CP000236_GR eggNOG:COG0042 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 HOGENOM:HOG000217855 OMA:VTDQPFR
Gene3D:1.10.1200.80 TIGRFAMs:TIGR00737 RefSeq:YP_507556.1
ProteinModelPortal:Q2GG77 STRING:Q2GG77 GeneID:3927061
KEGG:ech:ECH_0758 PATRIC:20576950 ProtClustDB:CLSK749467
BioCyc:ECHA205920:GJNR-761-MONOMER Uniprot:Q2GG77
Length = 317
Score = 203 (76.5 bits), Expect = 8.4e-15, P = 8.4e-15
Identities = 66/214 (30%), Positives = 101/214 (47%)
Query: 33 IILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDGSV 92
+ILAPM + PFR L GA L+ SE + ++ I L S
Sbjct: 12 VILAPMSGVTDFPFRYLVKSLGAGLLVSEMIASRAMI------------IQTKQSLQKSQ 59
Query: 93 VFRTCPREKNKIILQIGTADPERALEAAKKVEHDVAA--IDINMGCPKQFSLTGGMGAAL 150
+ + N + Q+ DP +AAK + D+ A IDIN GCP + + G+AL
Sbjct: 60 I------QINTAV-QLAGCDPTIMADAAK-LNEDMGAQIIDINFGCPVKKVVNSYAGSAL 111
Query: 151 LSTPDIACNILTTLISNLSIPVSCKIRVF--HNEADTIALCKRLEACGIIAIGVHGRTKA 208
+ A IL +++ + IPV+ K+R +N ++ L K E GI I +HGRT+
Sbjct: 112 MKDETTAAKILESVVKAVKIPVTLKMRTGWDNNNLNSPKLAKIAEETGIKMITIHGRTRT 171
Query: 209 ERPRHRNRIEMIRTLTQHLKIPVIANGGSKEIVD 242
+ + + IR + + +KIPVI NG K + D
Sbjct: 172 QMFTGKADWKFIRNIKKCVKIPVIVNGDIKNLND 205
>FB|FBgn0032750 [details] [associations]
symbol:CG10495 species:7227 "Drosophila melanogaster"
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0050660
"flavin adenine dinucleotide binding" evidence=IEA] [GO:0008033
"tRNA processing" evidence=IEA] [GO:0017150 "tRNA dihydrouridine
synthase activity" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136
EMBL:AE014134 Gene3D:3.20.20.70 GO:GO:0050660 eggNOG:COG0042
GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082 KO:K05545 OMA:AGPMVRY
GeneTree:ENSGT00550000074907 EMBL:AY069347 RefSeq:NP_609939.1
UniGene:Dm.465 SMR:Q9VJ06 STRING:Q9VJ06 EnsemblMetazoa:FBtr0081150
GeneID:35179 KEGG:dme:Dmel_CG10495 UCSC:CG10495-RA
FlyBase:FBgn0032750 InParanoid:Q9VJ06 OrthoDB:EOG4X3FH5
GenomeRNAi:35179 NextBio:792243 Uniprot:Q9VJ06
Length = 396
Score = 187 (70.9 bits), Expect = 3.2e-14, Sum P(2) = 3.2e-14
Identities = 56/215 (26%), Positives = 101/215 (46%)
Query: 34 ILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDGSVV 93
+ APMVR + L FR L G L ++ ++ + +E+ + +T G+
Sbjct: 26 VSAPMVRYSKLEFRRLVRLNGVQLAFTPMMISDSINNSEKARQNEFST--------GA-- 75
Query: 94 FRTCPREKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLST 153
+ +I Q DP + +A+ + V ID+N GCP+ +++ G G +L
Sbjct: 76 ------DDQPLIAQFAAKDPTEFVTSAQLIYPYVDGIDLNCGCPQSWAMAKGYGCGMLRQ 129
Query: 154 PDIACNILTTLISNL--SIPVSCKIRVFHNEAD---TIALCKRLEACGIIAIGVHGRTKA 208
P++ ++ + L VS K+R+ E TI L ++LE+ G+ + +HGRT A
Sbjct: 130 PELVHQVVQEVRRTLPGDFSVSVKMRLLGGEESLQRTIDLARQLESAGVTFLTLHGRTPA 189
Query: 209 ER-PRHRNRIEMIRTLTQHLKIPVIANGGSKEIVD 242
++ + I + + Q L+IP+I NG + D
Sbjct: 190 QKHSKDTLDIPAMSQVRQSLQIPLIVNGNVESYRD 224
Score = 53 (23.7 bits), Expect = 3.2e-14, Sum P(2) = 3.2e-14
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 253 FLRNHYPVEKL---PKTILYAHCKYKRFEVPKY 282
FL+ HY +E P + Y C Y F PK+
Sbjct: 316 FLKEHYNLEYSEVDPPSADYTDCTYTHFTPPKH 348
>WB|WBGene00009452 [details] [associations]
symbol:F36A2.2 species:6239 "Caenorhabditis elegans"
[GO:0008033 "tRNA processing" evidence=IEA] [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136
Gene3D:3.20.20.70 GO:GO:0050660 eggNOG:COG0042 HOGENOM:HOG000203649
KO:K05542 GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
GeneTree:ENSGT00550000075089 EMBL:Z81077 PIR:T21830
RefSeq:NP_492379.1 UniGene:Cel.26704 ProteinModelPortal:Q9XVN8
SMR:Q9XVN8 STRING:Q9XVN8 PaxDb:Q9XVN8 EnsemblMetazoa:F36A2.2
GeneID:185334 KEGG:cel:CELE_F36A2.2 UCSC:F36A2.2 CTD:185334
WormBase:F36A2.2 InParanoid:Q9XVN8 OMA:YLFASQP NextBio:927896
Uniprot:Q9XVN8
Length = 527
Score = 202 (76.2 bits), Expect = 7.0e-14, P = 7.0e-14
Identities = 59/206 (28%), Positives = 96/206 (46%)
Query: 34 ILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDGSVV 93
+LAPMV + L FR+ YGA L ++ + H V + L + PL V
Sbjct: 76 VLAPMVDQSELAFRMFTRKYGAQLTFTPMIHAHLFVNDGTYRRNSLALVKADRPL----V 131
Query: 94 FRTCPREKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLST 153
+ C NK+ + L A + VE +D+N+GCP+ + G G+ L
Sbjct: 132 VQFCA---NKV---------DTFLAACRLVEDVCDGVDLNLGCPQMVAKRGRYGSWLQDE 179
Query: 154 PDIACNILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRH 213
D+ C +++ + +P+SCKIRV + T+ KRL G + VHGRT+ +
Sbjct: 180 VDLICEMVSAVRDYCRLPISCKIRVRDDRQQTVEYAKRLVDAGATMLTVHGRTRDMKGAE 239
Query: 214 RNRIEM--IRTLTQHL--KIPVIANG 235
+ IR + + + ++PV+ANG
Sbjct: 240 TGLADWSRIRDVVEAVGSRVPVMANG 265
>UNIPROTKB|Q489F6 [details] [associations]
symbol:CPS_0550 "tRNA-dihydrouridine synthase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001269 InterPro:IPR004652
InterPro:IPR013785 InterPro:IPR018517 InterPro:IPR024036
Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136 Gene3D:3.20.20.70
GO:GO:0050660 EMBL:CP000083 GenomeReviews:CP000083_GR
eggNOG:COG0042 GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
HOGENOM:HOG000217855 KO:K05540 OMA:VTDQPFR Gene3D:1.10.1200.80
TIGRFAMs:TIGR00737 RefSeq:YP_267308.1 ProteinModelPortal:Q489F6
STRING:Q489F6 GeneID:3522222 KEGG:cps:CPS_0550 PATRIC:21464439
BioCyc:CPSY167879:GI48-645-MONOMER Uniprot:Q489F6
Length = 338
Score = 190 (71.9 bits), Expect = 6.2e-13, P = 6.2e-13
Identities = 66/211 (31%), Positives = 105/211 (49%)
Query: 30 SNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDH-KLVKTERKVNDLLNTIDFVDPL 88
+++++LAPM + PFR L GA L SE L + K+ TE+ +L+
Sbjct: 9 NSQVMLAPMAGITDQPFRQLCCQLGAGLAVSEMLSSNPKVWNTEKSKLRMLHG------- 61
Query: 89 DGSVVFRTCPREKNKIILQIGTADPERALEAAK-KVEHDVAAIDINMGCPKQFSLTGGMG 147
D + + R+ +QI + P+ AAK ++ IDINMGCP + G
Sbjct: 62 DAAGI-RS---------VQIAGSCPDELAFAAKVNADNGAQIIDINMGCPAKKVNKKLAG 111
Query: 148 AALLSTPDIACNILTTLISNLSIPVSCKIRVFHNEADT---IALCKRLEACGIIAIGVHG 204
+ALL P I+ ++++ + IPV+ KIR E DT I + K E GI ++ VHG
Sbjct: 112 SALLREPAQVERIVQSVVNAVDIPVTLKIRTGWCE-DTRNGIEIAKIAENSGIASLAVHG 170
Query: 205 RTKAERPRHRNRIEMIRTLTQHLKIPVIANG 235
RT+ + + + I+ + + IPV+ANG
Sbjct: 171 RTRNDFYKGNAEYDTIKAIKLAISIPVVANG 201
>TIGR_CMR|CPS_0550 [details] [associations]
symbol:CPS_0550 "NifR3/Smm1 family protein" species:167879
"Colwellia psychrerythraea 34H" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001269 InterPro:IPR004652 InterPro:IPR013785
InterPro:IPR018517 InterPro:IPR024036 Pfam:PF01207
PIRSF:PIRSF006621 PROSITE:PS01136 Gene3D:3.20.20.70 GO:GO:0050660
EMBL:CP000083 GenomeReviews:CP000083_GR eggNOG:COG0042
GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082 HOGENOM:HOG000217855
KO:K05540 OMA:VTDQPFR Gene3D:1.10.1200.80 TIGRFAMs:TIGR00737
RefSeq:YP_267308.1 ProteinModelPortal:Q489F6 STRING:Q489F6
GeneID:3522222 KEGG:cps:CPS_0550 PATRIC:21464439
BioCyc:CPSY167879:GI48-645-MONOMER Uniprot:Q489F6
Length = 338
Score = 190 (71.9 bits), Expect = 6.2e-13, P = 6.2e-13
Identities = 66/211 (31%), Positives = 105/211 (49%)
Query: 30 SNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDH-KLVKTERKVNDLLNTIDFVDPL 88
+++++LAPM + PFR L GA L SE L + K+ TE+ +L+
Sbjct: 9 NSQVMLAPMAGITDQPFRQLCCQLGAGLAVSEMLSSNPKVWNTEKSKLRMLHG------- 61
Query: 89 DGSVVFRTCPREKNKIILQIGTADPERALEAAK-KVEHDVAAIDINMGCPKQFSLTGGMG 147
D + + R+ +QI + P+ AAK ++ IDINMGCP + G
Sbjct: 62 DAAGI-RS---------VQIAGSCPDELAFAAKVNADNGAQIIDINMGCPAKKVNKKLAG 111
Query: 148 AALLSTPDIACNILTTLISNLSIPVSCKIRVFHNEADT---IALCKRLEACGIIAIGVHG 204
+ALL P I+ ++++ + IPV+ KIR E DT I + K E GI ++ VHG
Sbjct: 112 SALLREPAQVERIVQSVVNAVDIPVTLKIRTGWCE-DTRNGIEIAKIAENSGIASLAVHG 170
Query: 205 RTKAERPRHRNRIEMIRTLTQHLKIPVIANG 235
RT+ + + + I+ + + IPV+ANG
Sbjct: 171 RTRNDFYKGNAEYDTIKAIKLAISIPVVANG 201
>TIGR_CMR|GSU_1005 [details] [associations]
symbol:GSU_1005 "dihydrouridine synthase family protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0006400 "tRNA
modification" evidence=ISS] [GO:0017150 "tRNA dihydrouridine
synthase activity" evidence=ISS] InterPro:IPR001269
InterPro:IPR004652 InterPro:IPR013785 InterPro:IPR018517
InterPro:IPR024036 Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136
Gene3D:3.20.20.70 GO:GO:0050660 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 Gene3D:1.10.1200.80 TIGRFAMs:TIGR00737
OMA:PIARKHI HOGENOM:HOG000217853 RefSeq:NP_952059.1
ProteinModelPortal:Q74EF7 GeneID:2685628 KEGG:gsu:GSU1005
PATRIC:22024782 ProtClustDB:CLSK828131
BioCyc:GSUL243231:GH27-991-MONOMER Uniprot:Q74EF7
Length = 325
Score = 189 (71.6 bits), Expect = 6.9e-13, P = 6.9e-13
Identities = 63/212 (29%), Positives = 103/212 (48%)
Query: 26 NINYSNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFV 85
++ N +ILAPM + LPFRLLA + GA L ++E + + LV+ +K +LL ++
Sbjct: 9 SLTLGNNLILAPMAGITNLPFRLLAREQGAGLCFTEMVSVNGLVREGKKSFELLRSVPGD 68
Query: 86 DPLDGSVVFRTCPREKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGG 145
PL +Q+ DP+ A V+ IDINMGCP + + G
Sbjct: 69 RPLG----------------IQLFGDDPDVMGRVAATVDGYGDLIDINMGCPVKKVVGTG 112
Query: 146 MGAALLSTPDIACNILTTLISNLSIPVSCKIRVFHN--EADTIALCKRLEACGIIAIGVH 203
G+AL+ PD I+ + +P++ KIR + +A+ I + + E G A+ +H
Sbjct: 113 AGSALMREPDKVRAIVRAVRRATRLPLTVKIRSGWSCEDANFIQIARIAEEEGCNAVTLH 172
Query: 204 GRTKAERPRHRNRIEMIRTLTQHLKIPVIANG 235
R++A+ + L Q + IPVI +G
Sbjct: 173 PRSRAQMFEGTADWTKLAELKQAVAIPVIGSG 204
>POMBASE|SPCC777.15 [details] [associations]
symbol:SPCC777.15 "tRNA dihydrouridine synthase Dus4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006400 "tRNA modification"
evidence=ISO] [GO:0017150 "tRNA dihydrouridine synthase activity"
evidence=ISO] [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136
PomBase:SPCC777.15 GO:GO:0005739 EMBL:CU329672
GenomeReviews:CU329672_GR Gene3D:3.20.20.70 GO:GO:0050660
eggNOG:COG0042 HOGENOM:HOG000203649 GO:GO:0017150 PANTHER:PTHR11082
KO:K05545 OMA:AGPMVRY PIR:T11721 RefSeq:NP_588262.1
ProteinModelPortal:O74553 STRING:O74553 EnsemblFungi:SPCC777.15.1
GeneID:2538996 KEGG:spo:SPCC777.15 OrthoDB:EOG4PZNGJ
NextBio:20800171 Uniprot:O74553
Length = 326
Score = 186 (70.5 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 58/191 (30%), Positives = 95/191 (49%)
Query: 55 ADLVYSEELVDHKLVK---TERKVNDLLNTIDFVDPLDGSVVFRTCPREKNKIILQIGTA 111
A +V +L +LV+ T+ ++ +F+ P F T + + +ILQ G
Sbjct: 25 APMVRYSKLPFRQLVRDYNTDIVYTPMILAKEFLHPKGRYFDFSTNDADAS-LILQFGVD 83
Query: 112 DPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNL--S 169
DP +AA+ V V I IN GCP+ +++ G+G+ALL P+ ++ + S L S
Sbjct: 84 DPVILEKAAQLVGPYVDGIGINCGCPQTWAIQEGIGSALLDEPEKVHKLVRAVKSTLGES 143
Query: 170 IPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKI 229
KIR+ + T L + +E G I VHGRT+ +R ++ IR + ++I
Sbjct: 144 FCTEVKIRIAKDLNKTRHLMQVIEKSGADIITVHGRTRQDRSSFPVNLDAIREVRPCVQI 203
Query: 230 PVIANGGSKEI 240
PV+ANG K +
Sbjct: 204 PVVANGDVKSL 214
>TIGR_CMR|CJE_0118 [details] [associations]
symbol:CJE_0118 "tRNA-dihydrouridine synthase B"
species:195099 "Campylobacter jejuni RM1221" [GO:0006400 "tRNA
modification" evidence=ISS] [GO:0017150 "tRNA dihydrouridine
synthase activity" evidence=ISS] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 InterPro:IPR024036
Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136 Gene3D:3.20.20.70
GO:GO:0050660 EMBL:CP000025 GenomeReviews:CP000025_GR
eggNOG:COG0042 GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
HOGENOM:HOG000217855 KO:K05540 Gene3D:1.10.1200.80 OMA:ECAKEHL
RefSeq:YP_178142.1 ProteinModelPortal:Q5HX43 STRING:Q5HX43
GeneID:3230881 KEGG:cjr:CJE0118 PATRIC:20041943
ProtClustDB:CLSK872423 BioCyc:CJEJ195099:GJC0-122-MONOMER
Uniprot:Q5HX43
Length = 308
Score = 185 (70.2 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 64/213 (30%), Positives = 98/213 (46%)
Query: 27 INYSNK-IILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFV 85
I++S K + LAPM + LPFR + +GAD+ SE + + LV K +L +
Sbjct: 2 IDFSKKPLFLAPMAGFSDLPFRNVVKKFGADITISEMISSNALVYESSKTLHMLERAELE 61
Query: 86 DPLDGSVVFRTCPREKNKIILQIGTADPERALEAAKKV-EHD-VAAIDINMGCPKQFSLT 143
+P I+QI D E +A + + E D V ID N GCP +
Sbjct: 62 NPY----------------IVQIAGGDKEVLKKAVQMLNEMDFVDGIDFNCGCPVNKVVK 105
Query: 144 GGMGAALLSTPDIACNILTTLISNLSIPV-SCKIRVFHNEADTIALCKRLEACGIIAIGV 202
G+ALL ++ N++ + N + S K R+ NE + K E+ G+ I +
Sbjct: 106 QCAGSALLENLELFKNLVGVIKENNKKSLTSVKFRLGFNEKYPEKMAKICESLGVDFISI 165
Query: 203 HGRTKAERPRHRNRIEMIRTLTQHLKIPVIANG 235
HGRT+ + + I + +KIPVIANG
Sbjct: 166 HGRTRKQLYSGKADYGSIASAKASVKIPVIANG 198
>UNIPROTKB|H3BSF3 [details] [associations]
symbol:DUS2L "tRNA-dihydrouridine(20) synthase
[NAD(P)+]-like" species:9606 "Homo sapiens" [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
GO:GO:0005739 Gene3D:3.20.20.70 GO:GO:0050660 EMBL:AC130462
EMBL:AC040162 GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
HGNC:HGNC:26014 Ensembl:ENST00000564781 Bgee:H3BSF3 Uniprot:H3BSF3
Length = 51
Score = 167 (63.8 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 31/48 (64%), Positives = 40/48 (83%)
Query: 23 NQANINYSNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVK 70
N ++ Y NK+ILAPMVR+ TLP RLLALDYGAD+VY EEL+D K+++
Sbjct: 4 NSLSLCYHNKLILAPMVRVGTLPMRLLALDYGADIVYCEELIDLKMIQ 51
>UNIPROTKB|J3QQL9 [details] [associations]
symbol:DUS1L "tRNA-dihydrouridine(16/17) synthase
[NAD(P)(+)]-like" species:9606 "Homo sapiens" [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136
Gene3D:3.20.20.70 GO:GO:0050660 EMBL:AC135056 HGNC:HGNC:30086
GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
Ensembl:ENST00000577907 Uniprot:J3QQL9
Length = 152
Score = 122 (48.0 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 29/92 (31%), Positives = 44/92 (47%)
Query: 88 LDGSVVFRTCPREKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMG 147
L V R K + ++ D ++AA + AID+N+GCP+ + G G
Sbjct: 49 LHAQVFVRDANYRKENLYCEVCPEDRPLIVQAALLAQDYCDAIDLNLGCPQMIAKRGHYG 108
Query: 148 AALLSTPDIACNILTTLISNLSIPVSCKIRVF 179
A L D+ ++ LS+PV+CKIRVF
Sbjct: 109 AFLQDEWDLLQRMILLAHEKLSVPVTCKIRVF 140
Score = 60 (26.2 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 34 ILAPMVRMNTLPFRLLALDYGADLVYSEEL 63
++APMV + L +RLL+ +GA L Y+ L
Sbjct: 20 VVAPMVDQSELAWRLLSRRHGAQLCYTPML 49
>UNIPROTKB|G4MUR1 [details] [associations]
symbol:MGG_08825 "tRNA-dihydrouridine synthase 1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136
Gene3D:3.20.20.70 GO:GO:0050660 EMBL:CM001232 KO:K05542
GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082 RefSeq:XP_003713841.1
ProteinModelPortal:G4MUR1 EnsemblFungi:MGG_08825T0 GeneID:2679811
KEGG:mgr:MGG_08825 Uniprot:G4MUR1
Length = 614
Score = 167 (63.8 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 45/143 (31%), Positives = 69/143 (48%)
Query: 98 PREKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIA 157
P + +Q DP LEAAK V A+D+N+GCP+ + G GA L ++
Sbjct: 114 PAIDRPLFVQFCANDPSALLEAAKHVAPYCDAVDLNLGCPQGIARKGHYGAFLQEDQELI 173
Query: 158 CNILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRI 217
++ L LSIPV+ KIR+ T+A + + G + VHGR + E+ H +
Sbjct: 174 HKLIRQLHDGLSIPVTAKIRILDTPEATLAYARNVLDAGASILTVHGRRR-EQKGHLTGV 232
Query: 218 ---EMIRTLTQHL--KIPVIANG 235
IR L ++L + + ANG
Sbjct: 233 ADWSAIRHLRENLPPETVIFANG 255
Score = 41 (19.5 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 30 SNKIILAPMVRMNTLPFRLLALDY 53
S K ++APMV + +R+L +
Sbjct: 37 SPKFVVAPMVDQSEFAWRMLTRSF 60
>UNIPROTKB|H3BTR3 [details] [associations]
symbol:DUS2L "tRNA-dihydrouridine(20) synthase
[NAD(P)+]-like" species:9606 "Homo sapiens" [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 Gene3D:3.20.20.70 GO:GO:0050660 EMBL:AC130462
EMBL:AC040162 GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
HGNC:HGNC:26014 ProteinModelPortal:H3BTR3 SMR:H3BTR3
Ensembl:ENST00000561965 Bgee:H3BTR3 Uniprot:H3BTR3
Length = 87
Score = 141 (54.7 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 27/39 (69%), Positives = 32/39 (82%)
Query: 23 NQANINYSNKIILAPMVRMNTLPFRLLALDYGADLVYSE 61
N ++ Y NK+ILAPMVR+ TLP RLLALDYGAD+VY E
Sbjct: 4 NSLSLCYHNKLILAPMVRVGTLPMRLLALDYGADIVYCE 42
>UNIPROTKB|H3BRI6 [details] [associations]
symbol:DUS2L "tRNA-dihydrouridine(20) synthase
[NAD(P)+]-like" species:9606 "Homo sapiens" [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
GO:GO:0005739 Gene3D:3.20.20.70 GO:GO:0050660 EMBL:AC130462
EMBL:AC040162 GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
HGNC:HGNC:26014 Ensembl:ENST00000569289 Bgee:H3BRI6 Uniprot:H3BRI6
Length = 41
Score = 137 (53.3 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 26/37 (70%), Positives = 31/37 (83%)
Query: 23 NQANINYSNKIILAPMVRMNTLPFRLLALDYGADLVY 59
N ++ Y NK+ILAPMVR+ TLP RLLALDYGAD+VY
Sbjct: 4 NSLSLCYHNKLILAPMVRVGTLPMRLLALDYGADIVY 40
>ASPGD|ASPL0000054271 [details] [associations]
symbol:AN0956 species:162425 "Emericella nidulans"
[GO:0006400 "tRNA modification" evidence=IEA] [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA]
InterPro:IPR001269 InterPro:IPR013785 InterPro:IPR018517
Pfam:PF01207 PROSITE:PS01136 Gene3D:3.20.20.70 EMBL:BN001308
GO:GO:0050660 EMBL:AACD01000014 eggNOG:COG0042 HOGENOM:HOG000203649
KO:K05542 GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
OrthoDB:EOG480N5B RefSeq:XP_658560.1 ProteinModelPortal:Q5BES4
STRING:Q5BES4 EnsemblFungi:CADANIAT00001695 GeneID:2876733
KEGG:ani:AN0956.2 OMA:GHNTGLA Uniprot:Q5BES4
Length = 563
Score = 154 (59.3 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 39/144 (27%), Positives = 68/144 (47%)
Query: 98 PREKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIA 157
P + +Q DP+ AA+ V A+D+N+GCP+ + G GA L D+
Sbjct: 119 PAIDRPLFVQFCANDPDDFFNAARHVAPYCDAVDLNLGCPQGIARRGHYGAFLQEDWDLI 178
Query: 158 CNILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRI 217
++ L L +PV+ K R+ ++ T+ K + + G I +HGRT+ ++ +
Sbjct: 179 YKLINKLHMELEVPVTAKFRIQESKEKTLEYAKMILSAGASIITLHGRTREQKGHNTGLA 238
Query: 218 EM--IRTLTQHLK--IPVIANGGS 237
+ IR L +L + ANG +
Sbjct: 239 DWSYIRYLRDNLPPDTVIFANGNN 262
Score = 40 (19.1 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 30 SNKIILAPMVRMNTLPFRLLALDY 53
S K I+APMV + +R+L +
Sbjct: 41 SPKYIVAPMVDRSEFAWRMLTRSF 64
>UNIPROTKB|O53835 [details] [associations]
symbol:dus "Probable tRNA-dihydrouridine synthase"
species:1773 "Mycobacterium tuberculosis" [GO:0019217 "regulation
of fatty acid metabolic process" evidence=IDA] InterPro:IPR001269
InterPro:IPR004652 InterPro:IPR013785 InterPro:IPR018517
InterPro:IPR024036 Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136
Gene3D:3.20.20.70 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0050660 GO:GO:0019217 EMBL:BX842574
eggNOG:COG0042 GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
Gene3D:1.10.1200.80 TIGRFAMs:TIGR00737 PIR:G70810
RefSeq:NP_215338.1 RefSeq:NP_335273.1 RefSeq:YP_006514173.1
ProteinModelPortal:O53835 SMR:O53835
EnsemblBacteria:EBMYCT00000002102 EnsemblBacteria:EBMYCT00000070313
GeneID:13318720 GeneID:885380 GeneID:926148 KEGG:mtc:MT0845
KEGG:mtu:Rv0823c KEGG:mtv:RVBD_0823c PATRIC:18123594
TubercuList:Rv0823c HOGENOM:HOG000217856 OMA:PIARKHI
ProtClustDB:CLSK871859 Uniprot:O53835
Length = 389
Score = 151 (58.2 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 62/232 (26%), Positives = 104/232 (44%)
Query: 27 INYSNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKL-VKTERKVNDLLNTIDFV 85
I ++ ++LAPM + + FR L +L K+ + V +++ +
Sbjct: 18 IELASPVVLAPMAGVTNVAFRALC----------RQLEQSKVGTVSGLYVCEMVTARALI 67
Query: 86 DPLDGSVVFRTCPREKNKIILQIGTADPERALEAAKKVEHDVAA--IDINMGCPKQFSLT 143
+ ++ T +++ LQ+ T DP+ AA+ + + A ID+N GCP
Sbjct: 68 ERHPVTMHMTTFSADESPRSLQLYTVDPDTTYAAARMIAGEGLADHIDMNFGCPVPKVTK 127
Query: 144 GGMGAALLSTPDIACNILTTLI---SNLSIPVSCKIRVFHNEADTIAL-CKRL-EACGII 198
G GAAL + I+ + IPV+ K R+ ++A L R+ EA G
Sbjct: 128 RGGGAALPFKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDAHHTHLDAGRIAEAEGAA 187
Query: 199 AIGVHGRTKAERPRHRNRIEMIRTLTQHLK-IPVIANGGSKEIVDYGGVFSL 249
A+ +H RT A+R E I L QH++ IPV+ NG +I D G ++
Sbjct: 188 AVALHARTAAQRYSGTADWEQIARLKQHVRTIPVLGNG---DIYDAGDALAM 236
>UNIPROTKB|Q884C6 [details] [associations]
symbol:dusC "tRNA-dihydrouridine synthase C" species:223283
"Pseudomonas syringae pv. tomato str. DC3000" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136
Gene3D:3.20.20.70 GO:GO:0050660 EMBL:AE016853
GenomeReviews:AE016853_GR eggNOG:COG0042 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 HOGENOM:HOG000217854 KO:K05541
RefSeq:NP_791991.1 ProteinModelPortal:Q884C6 GeneID:1183820
KEGG:pst:PSPTO_2169 PATRIC:19995624 OMA:EWIARIQ
ProtClustDB:CLSK867771 BioCyc:PSYR223283:GJIX-2214-MONOMER
Uniprot:Q884C6
Length = 317
Score = 146 (56.5 bits), Expect = 9.6e-08, P = 9.6e-08
Identities = 47/143 (32%), Positives = 72/143 (50%)
Query: 106 LQIGTADPERALE-AAKKVEHDVAAIDINMGCP-KQFSLTGGMGAALLSTPDIACNILTT 163
LQ+ +DP E AA E +D+N GCP K + + G GA LL P++ I++
Sbjct: 67 LQLLGSDPVCLAENAAFACELGAPVLDLNFGCPAKTVNRSRG-GAILLKEPELLHTIVSQ 125
Query: 164 LISNL--SIPVSCKIRVFHNEADTIALCKRLEACGIIA-IGVHGRTKAERPRHRNRIEMI 220
+ + IPV+ K+R+ + D C R A G A I VH RTK + + E I
Sbjct: 126 VRRAVPKDIPVTAKMRLGYENTDGALDCARALADGGAAQIVVHARTKVDGYKPPAHWEWI 185
Query: 221 RTLTQHLKIPVIANGGSKEIVDY 243
+ + +K+PV+ANG + D+
Sbjct: 186 ARIQEVVKVPVVANGEIWTVEDW 208
>FB|FBgn0032819 [details] [associations]
symbol:CG10463 species:7227 "Drosophila melanogaster"
[GO:0008033 "tRNA processing" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0050660 "flavin adenine dinucleotide
binding" evidence=IEA] [GO:0017150 "tRNA dihydrouridine synthase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136
PROSITE:PS50103 Gene3D:3.20.20.70 GO:GO:0050660 GO:GO:0008270
GO:GO:0003676 eggNOG:COG0042 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 EMBL:AY119278 ProteinModelPortal:Q8MRT5
SMR:Q8MRT5 STRING:Q8MRT5 PaxDb:Q8MRT5 PRIDE:Q8MRT5
FlyBase:FBgn0032819 InParanoid:Q8MRT5 OrthoDB:EOG49CNPV
ArrayExpress:Q8MRT5 Bgee:Q8MRT5 Uniprot:Q8MRT5
Length = 604
Score = 149 (57.5 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 56/225 (24%), Positives = 103/225 (45%)
Query: 27 INYSNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVD 86
+++ K++L+P+ + LPFR + ++GAD+ E L+K + L D
Sbjct: 253 VDFREKLVLSPLTTLGNLPFRRICKEFGADITCGEMACAQPLLKGMGQEWALTKRHQSED 312
Query: 87 PLDGSVVFRTCPREKNKIILQIGTADPERALEAAKKVEHDVAA---IDINMGCPKQFSLT 143
VF +Q+ +P +AA+ + H+ A ID+N+GCP
Sbjct: 313 ------VFG----------VQLCGNNPNMLNQAAQVI-HETAQVDFIDLNIGCPIDLIYQ 355
Query: 144 GGMGAALLSTPDIACNILTTLISNLS--IPVSCKIR--VFHNEADTIALCKRLEACGIIA 199
G G+AL+ +I + + LS +P + K+R ++ +++ L +E G A
Sbjct: 356 QGGGSALMRRTNIL-ELTVRSCAALSDRLPFTVKMRTGIYADKSVAHELLPLVEEWGASA 414
Query: 200 IGVHGRTKAER-PRHRNRIEMIRTLTQHLKIPVIANGGSKEIVDY 243
+ +HGR++ +R +H N + + ++PVI NG DY
Sbjct: 415 VTLHGRSREQRYTKHANWAYIEECAAKAKRMPVIGNGDILSYEDY 459
>UNIPROTKB|Q487W0 [details] [associations]
symbol:CPS_0906 "tRNA-dihydrouridine synthase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136
Gene3D:3.20.20.70 GO:GO:0050660 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0042 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 HOGENOM:HOG000217854 KO:K05541
OMA:FYHVARI RefSeq:YP_267655.1 ProteinModelPortal:Q487W0
STRING:Q487W0 DNASU:3523360 GeneID:3523360 KEGG:cps:CPS_0906
PATRIC:21465097 BioCyc:CPSY167879:GI48-992-MONOMER Uniprot:Q487W0
Length = 310
Score = 144 (55.7 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 63/215 (29%), Positives = 102/215 (47%)
Query: 32 KIILAPMVRMNTLPFRLLALDYGA-DLVYSE--ELVDHKLVKTERKVNDLLNTIDFVDPL 88
+++LAPM + R L G+ DL +E +VD L +R + + +
Sbjct: 2 RVVLAPMEGVLDYRMRDLLTQVGSYDLCVTEFIRVVDQVL--PDRVFHRYCPEL-----I 54
Query: 89 DGSVVFRTCPREKNKIILQIGTADPERALE-AAKKVEHDVAAIDINMGCP-KQFSLTGGM 146
D V + +C + + +Q+ PE E AAK +E + ID+N GCP K + + G
Sbjct: 55 DADV-YGSCTKAGTPVRVQLLGQYPEYMAENAAKVIELGSSGIDLNFGCPSKTVNKSRG- 112
Query: 147 GAALLSTPDIACNILTTLISNLSIP----VSCKIRVFHNEADTIAL--CKRLEACGIIAI 200
G+ LL P+ I+ + ++P VS KIR+ + E T+A+ + +EA G +
Sbjct: 113 GSILLKDPENLYQIIKAVKE--AVPSDTIVSAKIRLGY-EDKTLAIENGQAVEAAGANEL 169
Query: 201 GVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANG 235
+H RTK E + I + + IPVIANG
Sbjct: 170 TIHARTKLEGYKPPAHWHWIAKVKNAINIPVIANG 204
>TIGR_CMR|CPS_0906 [details] [associations]
symbol:CPS_0906 "NifR3/Smm1 family protein" species:167879
"Colwellia psychrerythraea 34H" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001269 InterPro:IPR013785 InterPro:IPR018517
Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136 Gene3D:3.20.20.70
GO:GO:0050660 EMBL:CP000083 GenomeReviews:CP000083_GR
eggNOG:COG0042 GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
HOGENOM:HOG000217854 KO:K05541 OMA:FYHVARI RefSeq:YP_267655.1
ProteinModelPortal:Q487W0 STRING:Q487W0 DNASU:3523360
GeneID:3523360 KEGG:cps:CPS_0906 PATRIC:21465097
BioCyc:CPSY167879:GI48-992-MONOMER Uniprot:Q487W0
Length = 310
Score = 144 (55.7 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 63/215 (29%), Positives = 102/215 (47%)
Query: 32 KIILAPMVRMNTLPFRLLALDYGA-DLVYSE--ELVDHKLVKTERKVNDLLNTIDFVDPL 88
+++LAPM + R L G+ DL +E +VD L +R + + +
Sbjct: 2 RVVLAPMEGVLDYRMRDLLTQVGSYDLCVTEFIRVVDQVL--PDRVFHRYCPEL-----I 54
Query: 89 DGSVVFRTCPREKNKIILQIGTADPERALE-AAKKVEHDVAAIDINMGCP-KQFSLTGGM 146
D V + +C + + +Q+ PE E AAK +E + ID+N GCP K + + G
Sbjct: 55 DADV-YGSCTKAGTPVRVQLLGQYPEYMAENAAKVIELGSSGIDLNFGCPSKTVNKSRG- 112
Query: 147 GAALLSTPDIACNILTTLISNLSIP----VSCKIRVFHNEADTIAL--CKRLEACGIIAI 200
G+ LL P+ I+ + ++P VS KIR+ + E T+A+ + +EA G +
Sbjct: 113 GSILLKDPENLYQIIKAVKE--AVPSDTIVSAKIRLGY-EDKTLAIENGQAVEAAGANEL 169
Query: 201 GVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANG 235
+H RTK E + I + + IPVIANG
Sbjct: 170 TIHARTKLEGYKPPAHWHWIAKVKNAINIPVIANG 204
>UNIPROTKB|P33371 [details] [associations]
symbol:dusC "tRNA-dihydrouridine synthase C" species:83333
"Escherichia coli K-12" [GO:0050660 "flavin adenine dinucleotide
binding" evidence=IEA] [GO:0002943 "tRNA dihydrouridine synthesis"
evidence=IEA;IMP] [GO:0017150 "tRNA dihydrouridine synthase
activity" evidence=IEA;IMP] [GO:0055114 "oxidation-reduction
process" evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136
Gene3D:3.20.20.70 GO:GO:0050660 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR EMBL:U00007
eggNOG:COG0042 GO:GO:0017150 PANTHER:PTHR11082 PIR:C64982
RefSeq:NP_416645.1 RefSeq:YP_490379.1 ProteinModelPortal:P33371
SMR:P33371 DIP:DIP-12808N IntAct:P33371 PRIDE:P33371
EnsemblBacteria:EBESCT00000002162 EnsemblBacteria:EBESCT00000017846
GeneID:12931463 GeneID:945458 KEGG:ecj:Y75_p2102 KEGG:eco:b2140
PATRIC:32119623 EchoBASE:EB1957 EcoGene:EG12022
HOGENOM:HOG000217854 KO:K05541 OMA:FYHVARI ProtClustDB:PRK10550
BioCyc:EcoCyc:EG12022-MONOMER BioCyc:ECOL316407:JW2128-MONOMER
BioCyc:MetaCyc:EG12022-MONOMER Genevestigator:P33371 Uniprot:P33371
Length = 315
Score = 143 (55.4 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 53/183 (28%), Positives = 83/183 (45%)
Query: 75 VNDLLNTIDFVDPLDGSVVFRTCPREKNKIILQIGTAD--------PERALE-AAKKVEH 125
+ + + +D + P+ V R CP +N GT P+ E AA+ VE
Sbjct: 30 ITEFVRVVDQLLPV--KVFHRICPELQNASRTPSGTLVRVQLLGQFPQWLAENAARAVEL 87
Query: 126 DVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLS--IPVSCKIRVFHNEA 183
+D+N GCP + G GA LL P++ + + +PVS K+R+ +
Sbjct: 88 GSWGVDLNCGCPSKTVNGSGGGATLLKDPELIYQGAKAMREAVPAHLPVSVKVRLGWDSG 147
Query: 184 DT-IALCKRLEACGIIAIGVHGRTKAE--RPRHRNRIEMIRTLTQHLKIPVIANGGSKEI 240
+ + ++ G + VHGRTK + R H + + I + Q L IPVIANG EI
Sbjct: 148 EKKFEIADAVQQAGATELVVHGRTKEQGYRAEHIDW-QAIGDIRQRLNIPVIANG---EI 203
Query: 241 VDY 243
D+
Sbjct: 204 WDW 206
>UNIPROTKB|Q0C5H0 [details] [associations]
symbol:dusA "tRNA-dihydrouridine synthase" species:228405
"Hyphomonas neptunium ATCC 15444" [GO:0002943 "tRNA dihydrouridine
synthesis" evidence=ISS] [GO:0006400 "tRNA modification"
evidence=ISS] [GO:0017150 "tRNA dihydrouridine synthase activity"
evidence=ISS] InterPro:IPR001269 InterPro:IPR004653
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207
PIRSF:PIRSF006621 PROSITE:PS01136 Gene3D:3.20.20.70 GO:GO:0050660
EMBL:CP000158 GenomeReviews:CP000158_GR eggNOG:COG0042
GO:GO:0017150 PANTHER:PTHR11082 HOGENOM:HOG000259834 KO:K05539
OMA:IPPLDYD ProtClustDB:PRK11815 TIGRFAMs:TIGR00742
RefSeq:YP_759023.1 ProteinModelPortal:Q0C5H0 STRING:Q0C5H0
GeneID:4288047 KEGG:hne:HNE_0293 PATRIC:32213376
BioCyc:HNEP228405:GI69-337-MONOMER Uniprot:Q0C5H0
Length = 328
Score = 143 (55.4 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 43/164 (26%), Positives = 81/164 (49%)
Query: 101 KNKIILQIGTADPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACN 159
++ ++LQ+G ++P + EAA+ E + +++N GCP + +G GA L++ PD+ +
Sbjct: 60 EHPLVLQLGGSEPGKLAEAARIAEGYGYDEVNLNCGCPSERVQSGAFGACLMAEPDLVAD 119
Query: 160 ILTTLISNLSIPVSCKIRVFHNEA---DTI-ALCKRLEACGIIAIGVHGRT---KAERPR 212
+ + + +SIPV+ K R+ ++ +T+ +++ G VH R K P+
Sbjct: 120 CVAAMRAAVSIPVTVKNRIAIDDLPARETLFTFIEKVSVAGCSVFTVHARKAWLKGLSPK 179
Query: 213 HRNRIEMIRT-LTQHLK-----IPVIANGGSKEIV---DYGGVF 247
+ + L LK + +I NGG I D+ GVF
Sbjct: 180 ENREVPPLDYGLVAELKTARPDLTIILNGGIATIDQCRDHIGVF 223
>SGD|S000004393 [details] [associations]
symbol:DUS3 "Dihydrouridine synthase" species:4932
"Saccharomyces cerevisiae" [GO:0017150 "tRNA dihydrouridine
synthase activity" evidence=IEA;ISS] [GO:0006400 "tRNA
modification" evidence=ISS;IMP] [GO:0008033 "tRNA processing"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0002943 "tRNA dihydrouridine synthesis" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136
PROSITE:PS50103 SGD:S000004393 GO:GO:0005634 GO:GO:0005737
Gene3D:3.20.20.70 GO:GO:0050660 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 EMBL:BK006945 EMBL:U19729 EMBL:Z18944 eggNOG:COG0042
GO:GO:0017150 PANTHER:PTHR11082 KO:K05544 HOGENOM:HOG000240610
GeneTree:ENSGT00550000075134 OrthoDB:EOG4M950K OMA:PWIFEEV
PIR:S55957 RefSeq:NP_013505.4 RefSeq:NP_013508.3
ProteinModelPortal:Q06053 SMR:Q06053 DIP:DIP-4469N MINT:MINT-473573
STRING:Q06053 PaxDb:Q06053 PeptideAtlas:Q06053 EnsemblFungi:YLR401C
GeneID:851117 GeneID:851120 KEGG:sce:YLR401C KEGG:sce:YLR404W
BioCyc:MetaCyc:MONOMER-16678 NextBio:967836 Genevestigator:Q06053
GermOnline:YLR401C Uniprot:Q06053
Length = 668
Score = 144 (55.7 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 57/189 (30%), Positives = 84/189 (44%)
Query: 29 YSNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDL--LNTIDFVD 86
Y KI+ +P+ + LP+R L GAD+ YSE + L++ L +T +F
Sbjct: 292 YHKKIV-SPLTTVGNLPYRRLMRKLGADVTYSEMALAVPLIQGTNSEWALPKAHTSEF-- 348
Query: 87 PLDGSVVFRTCPREKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGM 146
P G V C + +A EA +++ I++N GCP G
Sbjct: 349 PGFGVQV--ACSK----------AWQAAKAAEALANSVSEISEINLNSGCPIDLLYRQGS 396
Query: 147 GAALLSTPD--IACNILTTLISNLSIPVSCKIRVFHNEADTIA--LCKRL-EACGIIAIG 201
G+ALL P I C +S IP++ KIR E IA L KRL + AI
Sbjct: 397 GSALLDNPARMIRCLNAMNYVSK-DIPITVKIRTGTKEGHPIAEGLVKRLVNETDVAAIT 455
Query: 202 VHGRTKAER 210
+HGR++ +R
Sbjct: 456 LHGRSRQQR 464
>ZFIN|ZDB-GENE-040426-1260 [details] [associations]
symbol:dus3l "dihydrouridine synthase 3-like (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0008033 "tRNA
processing" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000571
InterPro:IPR001269 InterPro:IPR013785 InterPro:IPR018517
Pfam:PF01207 PROSITE:PS01136 PROSITE:PS50103
ZFIN:ZDB-GENE-040426-1260 Gene3D:3.20.20.70 GO:GO:0050660
GO:GO:0008270 GO:GO:0003676 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 KO:K05544 CTD:56931 HOGENOM:HOG000240610
HOVERGEN:HBG062413 EMBL:BC058066 IPI:IPI00486931 RefSeq:NP_956968.1
UniGene:Dr.81366 ProteinModelPortal:Q6PEH0 STRING:Q6PEH0
GeneID:393647 KEGG:dre:393647 InParanoid:Q6PEH0 NextBio:20814655
ArrayExpress:Q6PEH0 Uniprot:Q6PEH0
Length = 660
Score = 114 (45.2 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 35/121 (28%), Positives = 56/121 (46%)
Query: 126 DVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFHNEADT 185
DV +DIN GCP G G L++ I+ + S L +P++ KIR +
Sbjct: 396 DVDFVDINSGCPIDLVYKKGGGCGLMTRTSKFEQIVRGMNSVLDVPLTVKIRTGVQQNSN 455
Query: 186 IA--LCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQ-HLKIPVIANGGSKEIVD 242
IA L ++ G+ I +HGR++ +R + I T Q +P+ NG +I+
Sbjct: 456 IAHKLIPEMKKWGVSLITLHGRSREQRYTKLADWDYINTCAQLAAPVPLFGNG---DILS 512
Query: 243 Y 243
Y
Sbjct: 513 Y 513
Score = 72 (30.4 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 12/46 (26%), Positives = 25/46 (54%)
Query: 16 VLDMANANQANINYSNKIILAPMVRMNTLPFRLLALDYGADLVYSE 61
++ + + +++ +K+ LAP+ LPFR + +GAD+ E
Sbjct: 300 IIKLRPCEKKQVDFRDKLYLAPLTTCGNLPFRRVCKRFGADITCGE 345
>CGD|CAL0005565 [details] [associations]
symbol:orf19.1565 species:5476 "Candida albicans" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006400 "tRNA
modification" evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136 PROSITE:PS50103
CGD:CAL0005565 GO:GO:0005634 GO:GO:0005737 Gene3D:3.20.20.70
GO:GO:0050660 GO:GO:0046872 GO:GO:0003700 EMBL:AACQ01000008
EMBL:AACQ01000007 eggNOG:COG0042 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 KO:K05544 RefSeq:XP_722466.1 RefSeq:XP_722607.1
ProteinModelPortal:Q5ALL3 STRING:Q5ALL3 GeneID:3635756
GeneID:3635912 KEGG:cal:CaO19.1565 KEGG:cal:CaO19.9138
Uniprot:Q5ALL3
Length = 613
Score = 138 (53.6 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 56/196 (28%), Positives = 87/196 (44%)
Query: 22 ANQANINYSNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNT 81
A + ++ N I++P+ + LP+R L GAD+ YSE + L++ L
Sbjct: 236 AEKKKLHLRNAKIVSPLTTVGNLPYRRLMKTLGADVTYSEMALSVPLIQGHNPEWALPKA 295
Query: 82 IDFVDPLDGSVVFRTCPREKNKIILQIGTADPERALEAAKKVEHD---VAAIDINMGCPK 138
V G V QI ++ A +AA+ + + V+ +++N GCP
Sbjct: 296 --HVSEYPGFGV-------------QIASSKHWAAAKAAEAIYRNTTHVSELNLNCGCPI 340
Query: 139 QFSLTGGMGAALLSTPDIACNILTTL-ISNLSIPVSCKIRVFHNEADTIA--LCKR-LEA 194
G G+ALL P IL+ + S+ IPV+ KIR E A L R LE
Sbjct: 341 DLLYKQGQGSALLDQPSKLLRILSGMNASSGDIPVTVKIRTGIKEGKNTAVNLVSRVLEE 400
Query: 195 CGIIAIGVHGRTKAER 210
AI +HGR++ +R
Sbjct: 401 GNAAAITLHGRSRQQR 416
>UNIPROTKB|Q5ALL3 [details] [associations]
symbol:DUS3 "tRNA-dihydrouridine(47) synthase [NAD(P)(+)]"
species:237561 "Candida albicans SC5314" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136 PROSITE:PS50103
CGD:CAL0005565 GO:GO:0005634 GO:GO:0005737 Gene3D:3.20.20.70
GO:GO:0050660 GO:GO:0046872 GO:GO:0003700 EMBL:AACQ01000008
EMBL:AACQ01000007 eggNOG:COG0042 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 KO:K05544 RefSeq:XP_722466.1 RefSeq:XP_722607.1
ProteinModelPortal:Q5ALL3 STRING:Q5ALL3 GeneID:3635756
GeneID:3635912 KEGG:cal:CaO19.1565 KEGG:cal:CaO19.9138
Uniprot:Q5ALL3
Length = 613
Score = 138 (53.6 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 56/196 (28%), Positives = 87/196 (44%)
Query: 22 ANQANINYSNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNT 81
A + ++ N I++P+ + LP+R L GAD+ YSE + L++ L
Sbjct: 236 AEKKKLHLRNAKIVSPLTTVGNLPYRRLMKTLGADVTYSEMALSVPLIQGHNPEWALPKA 295
Query: 82 IDFVDPLDGSVVFRTCPREKNKIILQIGTADPERALEAAKKVEHD---VAAIDINMGCPK 138
V G V QI ++ A +AA+ + + V+ +++N GCP
Sbjct: 296 --HVSEYPGFGV-------------QIASSKHWAAAKAAEAIYRNTTHVSELNLNCGCPI 340
Query: 139 QFSLTGGMGAALLSTPDIACNILTTL-ISNLSIPVSCKIRVFHNEADTIA--LCKR-LEA 194
G G+ALL P IL+ + S+ IPV+ KIR E A L R LE
Sbjct: 341 DLLYKQGQGSALLDQPSKLLRILSGMNASSGDIPVTVKIRTGIKEGKNTAVNLVSRVLEE 400
Query: 195 CGIIAIGVHGRTKAER 210
AI +HGR++ +R
Sbjct: 401 GNAAAITLHGRSRQQR 416
>UNIPROTKB|F1NGP4 [details] [associations]
symbol:DUS3L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001269 InterPro:IPR013785 InterPro:IPR018517
Pfam:PF01207 PROSITE:PS01136 PROSITE:PS50103 Gene3D:3.20.20.70
GO:GO:0050660 GO:GO:0008270 GO:GO:0003676 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 OMA:MSEWALL
GeneTree:ENSGT00550000075134 EMBL:AADN02072212 IPI:IPI00581852
Ensembl:ENSGALT00000002780 Uniprot:F1NGP4
Length = 630
Score = 136 (52.9 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 48/199 (24%), Positives = 88/199 (44%)
Query: 16 VLDMANANQANINYSNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKV 75
++ + + + + K+ LAP+ LPFR + +GAD+ E V L++ +
Sbjct: 270 IVKLRSCEKKKLEIQGKLYLAPLTTCGNLPFRRICKRFGADVTCGEMAVCTNLLQGQSSE 329
Query: 76 NDLLNTIDFVDPLDGSVVFRTCPREKNKIILQIGTADPERALEAAKKVEH--DVAAIDIN 133
LL D +F +Q+ A P+ + A+ + DV +DIN
Sbjct: 330 WALLKRHHTED------IFG----------VQLEGAFPDTMTKCAELLNQTIDVDFVDIN 373
Query: 134 MGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFHNEADTIA--LCKR 191
+GCP G G AL++ + I+ + S L +P++ KIR E +A + +
Sbjct: 374 VGCPIDLVYKKGGGCALMTRSNKFEQIVRGMNSVLDVPLTVKIRTGVQEKMNVAHKIIPK 433
Query: 192 LEACGIIAIGVHGRTKAER 210
+ G + +HGR++ +R
Sbjct: 434 IREWGASMVTLHGRSREQR 452
>MGI|MGI:2147092 [details] [associations]
symbol:Dus3l "dihydrouridine synthase 3-like (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008033 "tRNA processing" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0017150 "tRNA dihydrouridine synthase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136 PROSITE:PS50103
MGI:MGI:2147092 Gene3D:3.20.20.70 GO:GO:0050660 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 eggNOG:COG0042 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 KO:K05544 CTD:56931
HOGENOM:HOG000240610 HOVERGEN:HBG062413 OrthoDB:EOG4K6G43
EMBL:AY040840 EMBL:AK157702 EMBL:BC052481 IPI:IPI00129184
IPI:IPI00776080 RefSeq:NP_659107.2 UniGene:Mm.293973
ProteinModelPortal:Q91XI1 SMR:Q91XI1 STRING:Q91XI1
PhosphoSite:Q91XI1 PaxDb:Q91XI1 PRIDE:Q91XI1
Ensembl:ENSMUST00000007747 GeneID:224907 KEGG:mmu:224907
UCSC:uc008ddd.2 GeneTree:ENSGT00550000075134 InParanoid:Q91XI1
NextBio:377458 Bgee:Q91XI1 CleanEx:MM_DUS3L Genevestigator:Q91XI1
GermOnline:ENSMUSG00000007603 Uniprot:Q91XI1
Length = 637
Score = 136 (52.9 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 50/199 (25%), Positives = 89/199 (44%)
Query: 16 VLDMANANQANINYSNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKV 75
V+ + + ++ S K+ LAP+ LPFR + +GAD+ E V L++ +
Sbjct: 277 VIRLRPCEKKRLDISGKLYLAPLTTCGNLPFRRICKRFGADVTCGEMAVCTNLLQGQMSE 336
Query: 76 NDLLNTIDFVDPLDGSVVFRTCPREKNKIILQIGTADPERALEAAKKVEH--DVAAIDIN 133
LL P + +F +Q+ A P+ + A+ + DV +DIN
Sbjct: 337 WALLKR----HPCED--IFG----------VQLEGAFPDTMTKCAELLNRTIDVDFVDIN 380
Query: 134 MGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFHNEADTIA--LCKR 191
+GCP G G AL++ I+ + L +P++ K+R E ++A L
Sbjct: 381 VGCPIDLVYKKGGGCALMNRSAKFQQIVRGVNGVLDVPLTVKMRTGVQERVSLAHRLLPE 440
Query: 192 LEACGIIAIGVHGRTKAER 210
L G+ + +HGR++ +R
Sbjct: 441 LRDWGVALVTLHGRSREQR 459
>UNIPROTKB|Q607T6 [details] [associations]
symbol:MCA1669 "tRNA-dihydrouridine synthase"
species:243233 "Methylococcus capsulatus str. Bath" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001269 InterPro:IPR004653
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207
PIRSF:PIRSF006621 PROSITE:PS01136 Gene3D:3.20.20.70 GO:GO:0050660
EMBL:AE017282 GenomeReviews:AE017282_GR GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 HOGENOM:HOG000259834 KO:K05539 OMA:IPPLDYD
ProtClustDB:PRK11815 TIGRFAMs:TIGR00742 RefSeq:YP_114112.1
ProteinModelPortal:Q607T6 GeneID:3102115 KEGG:mca:MCA1669
PATRIC:22607174 Uniprot:Q607T6
Length = 360
Score = 132 (51.5 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 40/153 (26%), Positives = 71/153 (46%)
Query: 98 PREKNKIILQIGTADPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDI 156
P E + + +Q+G +DPE E AK E +++N+GCP TG GA L++ P+
Sbjct: 79 PAE-HPLAIQLGGSDPEALAECAKIAEFRGFDEVNLNVGCPSPRVQTGRFGACLMAEPER 137
Query: 157 ACNILTTLISNLSIPVSCKIRVFHNEADT----IALCKRLEACGIIAIGVHGRT------ 206
+ + + +S+PV+ K R+ ++ D+ + + G VH R
Sbjct: 138 VADCVRAMCEAVSVPVTVKTRIGIDDRDSYEDLLHFVTIVAEAGCRTFIVHARKAWLQGL 197
Query: 207 --KAERPRHRNRIEMIRTLTQHL-KIPVIANGG 236
K R R +++R L L ++ ++ NGG
Sbjct: 198 SPKENRQTPPLRYDVVRRLKSELPELAIVLNGG 230
>UNIPROTKB|F1SBU5 [details] [associations]
symbol:LOC100513458 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] [GO:0017150 "tRNA dihydrouridine synthase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001269 InterPro:IPR013785 InterPro:IPR018517
Pfam:PF01207 PROSITE:PS01136 PROSITE:PS50103 Gene3D:3.20.20.70
GO:GO:0050660 GO:GO:0008270 GO:GO:0003676 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 KO:K05544 OMA:MSEWALL
GeneTree:ENSGT00550000075134 EMBL:CU928983 EMBL:FP089464
RefSeq:XP_003123132.1 RefSeq:XP_003123140.1 UniGene:Ssc.48250
UniGene:Ssc.82799 Ensembl:ENSSSCT00000014768
Ensembl:ENSSSCT00000014775 GeneID:100512091 GeneID:100513458
KEGG:ssc:100512091 KEGG:ssc:100513458 Uniprot:F1SBU5
Length = 652
Score = 135 (52.6 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 58/233 (24%), Positives = 101/233 (43%)
Query: 16 VLDMANANQANINYSNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKV 75
V+ + + ++ S K+ LAP+ LPFR + +GAD+ E V L++ +
Sbjct: 292 VVRLRPCEKRRLDISGKLYLAPLTTCGNLPFRRICKRFGADVTCGEMAVCTNLLQGQTSE 351
Query: 76 NDLLNTIDFVDPLDGSVVFRTCPREKNKIILQIGTADPERALEAAKKVEH--DVAAIDIN 133
LL P + VF +Q+ A P+ + A+ + +V +DIN
Sbjct: 352 WALLKR----HPCED--VFG----------VQLEGAFPDTMTKCAELLNRTIEVDFVDIN 395
Query: 134 MGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFHNEADTIA--LCKR 191
+GCP G G AL++ I+ + L +P++ KIR E +A L
Sbjct: 396 VGCPIDLVYKKGGGCALMNRSAKFQQIVRGMNQVLDVPLTVKIRTGVQERVNLAHRLLPE 455
Query: 192 LEACGIIAIGVHGRTKAERPRHRNRIEMI-RTLTQHLKIPVIANGGSKEIVDY 243
L G + +HGR++ +R + I + +T +P+ NG +I+ Y
Sbjct: 456 LRDWGAALVTLHGRSREQRYTKLADWQYIEQCVTAASPMPLFGNG---DILSY 505
>UNIPROTKB|Q9KT00 [details] [associations]
symbol:dusC "tRNA-dihydrouridine synthase C" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001269 InterPro:IPR013785 InterPro:IPR018517
Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136 Gene3D:3.20.20.70
GO:GO:0050660 EMBL:AE003852 GenomeReviews:AE003852_GR
eggNOG:COG0042 GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
KO:K05541 OMA:FYHVARI PIR:D82241 RefSeq:NP_230750.1
ProteinModelPortal:Q9KT00 DNASU:2614375 GeneID:2614375
KEGG:vch:VC1105 PATRIC:20081304 ProtClustDB:CLSK874217
Uniprot:Q9KT00
Length = 323
Score = 130 (50.8 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 55/194 (28%), Positives = 87/194 (44%)
Query: 61 EELVDHKLVKTERKVNDL-LNTIDFVDP----LDGSVVFRTCP--REKNK------IILQ 107
E ++DH + ++ND +FV L V +R CP ++ +K + +Q
Sbjct: 9 EGVLDHLMRDMLTQINDYDFCVTEFVRVVNLLLPDHVFYRLCPELQQGSKTPSGVPVKVQ 68
Query: 108 IGTADPERALE-AAKKVEHDVAAIDINMGCP-KQFSLTGGMGAALLSTPDIACNILTTLI 165
+ DP E A + E ID+N GCP K + + G GAALL P++ ++
Sbjct: 69 LLGQDPHWMAENAIRAAELGAYGIDLNFGCPAKMVNQSKG-GAALLQHPELIYQVVKACR 127
Query: 166 SNLS--IPVSCKIRV-FHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRN-RIEMIR 221
+ IPVS KIR+ + + D + + + VH RTKA + + I
Sbjct: 128 DAVPAHIPVSAKIRLGWEDPEDCFEIVDAVAQAKADELTVHARTKAGGYKASEIKWHYID 187
Query: 222 TLTQHLKIPVIANG 235
+ Q IP+IANG
Sbjct: 188 QIRQKCSIPLIANG 201
>TIGR_CMR|VC_1105 [details] [associations]
symbol:VC_1105 "conserved hypothetical protein" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207
PIRSF:PIRSF006621 PROSITE:PS01136 Gene3D:3.20.20.70 GO:GO:0050660
EMBL:AE003852 GenomeReviews:AE003852_GR eggNOG:COG0042
GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082 KO:K05541 OMA:FYHVARI
PIR:D82241 RefSeq:NP_230750.1 ProteinModelPortal:Q9KT00
DNASU:2614375 GeneID:2614375 KEGG:vch:VC1105 PATRIC:20081304
ProtClustDB:CLSK874217 Uniprot:Q9KT00
Length = 323
Score = 130 (50.8 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 55/194 (28%), Positives = 87/194 (44%)
Query: 61 EELVDHKLVKTERKVNDL-LNTIDFVDP----LDGSVVFRTCP--REKNK------IILQ 107
E ++DH + ++ND +FV L V +R CP ++ +K + +Q
Sbjct: 9 EGVLDHLMRDMLTQINDYDFCVTEFVRVVNLLLPDHVFYRLCPELQQGSKTPSGVPVKVQ 68
Query: 108 IGTADPERALE-AAKKVEHDVAAIDINMGCP-KQFSLTGGMGAALLSTPDIACNILTTLI 165
+ DP E A + E ID+N GCP K + + G GAALL P++ ++
Sbjct: 69 LLGQDPHWMAENAIRAAELGAYGIDLNFGCPAKMVNQSKG-GAALLQHPELIYQVVKACR 127
Query: 166 SNLS--IPVSCKIRV-FHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRN-RIEMIR 221
+ IPVS KIR+ + + D + + + VH RTKA + + I
Sbjct: 128 DAVPAHIPVSAKIRLGWEDPEDCFEIVDAVAQAKADELTVHARTKAGGYKASEIKWHYID 187
Query: 222 TLTQHLKIPVIANG 235
+ Q IP+IANG
Sbjct: 188 QIRQKCSIPLIANG 201
>RGD|1563228 [details] [associations]
symbol:Dus3l "dihydrouridine synthase 3-like (S. cerevisiae)"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0017150 "tRNA dihydrouridine synthase activity" evidence=IEA]
[GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136 PROSITE:PS50103
RGD:1563228 Gene3D:3.20.20.70 GO:GO:0050660 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 KO:K05544 CTD:56931 HOVERGEN:HBG062413
EMBL:BC105780 IPI:IPI00373725 RefSeq:NP_001030095.1
UniGene:Rn.42187 ProteinModelPortal:Q3KRC5 PhosphoSite:Q3KRC5
PRIDE:Q3KRC5 GeneID:301122 KEGG:rno:301122 NextBio:648195
Genevestigator:Q3KRC5 Uniprot:Q3KRC5
Length = 640
Score = 133 (51.9 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 49/199 (24%), Positives = 89/199 (44%)
Query: 16 VLDMANANQANINYSNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKV 75
V+ + + ++ S K+ LAP+ LPFR + +GAD+ E + L++ +
Sbjct: 280 VVRLRPCEKKRLDISGKLYLAPLTTCGNLPFRRICKRFGADVTCGEMAMCTNLLQGQMSE 339
Query: 76 NDLLNTIDFVDPLDGSVVFRTCPREKNKIILQIGTADPERALEAAKKVEH--DVAAIDIN 133
LL P + +F +Q+ A P+ + A+ + DV +DIN
Sbjct: 340 WALLKR----HPCED--IFG----------VQLEGAFPDTMTKCAELLNRTIDVDFVDIN 383
Query: 134 MGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFHNEADTIA--LCKR 191
+GCP G G AL++ I+ + L +P++ K+R E ++A L
Sbjct: 384 VGCPIDLVYKKGGGCALMNRSAKFQQIVRGMNEVLDVPLTVKMRTGVQERVSLAHRLLPE 443
Query: 192 LEACGIIAIGVHGRTKAER 210
L G+ + +HGR++ +R
Sbjct: 444 LRNWGVALVTLHGRSREQR 462
>UNIPROTKB|Q96G46 [details] [associations]
symbol:DUS3L "tRNA-dihydrouridine(47) synthase
[NAD(P)(+)]-like" species:9606 "Homo sapiens" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0017150 "tRNA dihydrouridine synthase activity"
evidence=IEA] [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136
PROSITE:PS50103 Gene3D:3.20.20.70 GO:GO:0050660 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 EMBL:AC011499 eggNOG:COG0042
GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082 KO:K05544
EMBL:AK023958 EMBL:BC004549 EMBL:BC008362 EMBL:BC009973
EMBL:AL365411 IPI:IPI00186125 IPI:IPI00640947 IPI:IPI00784107
RefSeq:NP_001155091.1 RefSeq:NP_064560.2 UniGene:Hs.284297
ProteinModelPortal:Q96G46 SMR:Q96G46 IntAct:Q96G46 STRING:Q96G46
PhosphoSite:Q96G46 DMDM:110808212 PaxDb:Q96G46 PRIDE:Q96G46
DNASU:56931 Ensembl:ENST00000309061 Ensembl:ENST00000320699
GeneID:56931 KEGG:hsa:56931 UCSC:uc002mdc.3 UCSC:uc002mdd.3
CTD:56931 GeneCards:GC19M005737 HGNC:HGNC:26920 HPA:HPA041854
HPA:HPA041944 neXtProt:NX_Q96G46 PharmGKB:PA142671938
HOGENOM:HOG000240610 HOVERGEN:HBG062413 InParanoid:Q96G46
OMA:MSEWALL OrthoDB:EOG4K6G43 GenomeRNAi:56931 NextBio:62471
ArrayExpress:Q96G46 Bgee:Q96G46 CleanEx:HS_DUS3L
Genevestigator:Q96G46 GermOnline:ENSG00000141994 Uniprot:Q96G46
Length = 650
Score = 133 (51.9 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 54/225 (24%), Positives = 93/225 (41%)
Query: 16 VLDMANANQANINYSNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKV 75
V+ + + ++ K+ LAP+ LPFR + +GAD+ E V L++ +
Sbjct: 290 VVRLRPCEKKRLDIRGKLYLAPLTTCGNLPFRRICKRFGADVTCGEMAVCTNLLQGQMSE 349
Query: 76 NDLLNTIDFVDPLDGSVVFRTCPREKNKIILQIGTADPERALEAAKKVEHDVAA--IDIN 133
LL D +F +Q+ A P+ + A+ + V +DIN
Sbjct: 350 WALLKRHQCED------IFG----------VQLEGAFPDTMTKCAELLSRTVEVDFVDIN 393
Query: 134 MGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFHNEADTIA--LCKR 191
+GCP G G AL++ I+ + L +P++ KIR E +A L
Sbjct: 394 VGCPIDLVYKKGGGCALMNRSTKFQQIVRGMNQVLDVPLTVKIRTGVQERVNLAHRLLPE 453
Query: 192 LEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLK-IPVIANG 235
L G+ + +HGR++ +R + I Q +P+ NG
Sbjct: 454 LRDWGVALVTLHGRSREQRYTKLADWQYIEECVQAASPMPLFGNG 498
>UNIPROTKB|F1PS34 [details] [associations]
symbol:LOC100856098 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0050660 "flavin adenine dinucleotide
binding" evidence=IEA] [GO:0017150 "tRNA dihydrouridine synthase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136 PROSITE:PS50103
Gene3D:3.20.20.70 GO:GO:0050660 GO:GO:0008270 GO:GO:0003676
GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082 KO:K05544 OMA:MSEWALL
GeneTree:ENSGT00550000075134 EMBL:AAEX03012510
RefSeq:XP_003639789.1 Ensembl:ENSCAFT00000029778 GeneID:100856098
KEGG:cfa:100856098 Uniprot:F1PS34
Length = 645
Score = 131 (51.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 56/233 (24%), Positives = 100/233 (42%)
Query: 16 VLDMANANQANINYSNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKV 75
++ + + ++ K+ LAP+ LPFR + +GAD+ E V L++ +
Sbjct: 285 IVRLRPCEKRKLDIGGKLYLAPLTTCGNLPFRRICKRFGADVTCGEMAVCTNLLQGQTSE 344
Query: 76 NDLLNTIDFVDPLDGSVVFRTCPREKNKIILQIGTADPERALEAAKKVEH--DVAAIDIN 133
LL P + VF +Q+ A P+ + A+ + +V +DIN
Sbjct: 345 WALLRR----HPCED--VFG----------VQLEGAFPDTMTKCAELLNRTIEVDFVDIN 388
Query: 134 MGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFHNEADTIA--LCKR 191
+GCP G G AL++ I+ + L +P++ KIR E +A L
Sbjct: 389 VGCPIDLVYKKGGGCALMNRSAKFQQIVRGMNQVLDVPLTVKIRTGVQERVNLAHRLLPE 448
Query: 192 LEACGIIAIGVHGRTKAERPRHRNRIEMI-RTLTQHLKIPVIANGGSKEIVDY 243
L G + +HGR++ +R + I + +T +P+ NG +I+ Y
Sbjct: 449 LREWGAALVTLHGRSREQRYTKLADWQYIEQCVTAASPMPLFGNG---DILSY 498
>UNIPROTKB|Q83D40 [details] [associations]
symbol:CBU_0904 "tRNA-dihydrouridine synthase"
species:227377 "Coxiella burnetii RSA 493" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001269 InterPro:IPR004653
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207
PIRSF:PIRSF006621 PROSITE:PS01136 Gene3D:3.20.20.70 GO:GO:0050660
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 HOGENOM:HOG000259834 KO:K05539 OMA:IPPLDYD
ProtClustDB:PRK11815 TIGRFAMs:TIGR00742 RefSeq:NP_819919.1
ProteinModelPortal:Q83D40 PRIDE:Q83D40 GeneID:1208797
KEGG:cbu:CBU_0904 PATRIC:17930509
BioCyc:CBUR227377:GJ7S-895-MONOMER Uniprot:Q83D40
Length = 353
Score = 127 (49.8 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 42/155 (27%), Positives = 69/155 (44%)
Query: 100 EKNKIILQIGTADPER-ALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIAC 158
E++ + LQ+G +DP+ AL A E I++N+GCP + G GA LL ++
Sbjct: 81 EEHPLALQVGGSDPQSLALCARLAEEKGFDEINLNVGCPSGRVIAGRFGACLLKEAELVA 140
Query: 159 NILTTLISNLSIPVSCKIRVFHNEADTIA----LCKRLEACGIIAIGVHGRT---KAERP 211
+ + + + ++IPVS K R ++ D+ K + G +H R K P
Sbjct: 141 DCVAAMSAEVNIPVSVKTRTGVDDQDSYEHLYHFVKTVAEAGCRIFIIHARKAWLKGLSP 200
Query: 212 RHRNRIE-----MIRTLTQHLK-IPVIANGGSKEI 240
+ M+ L Q + +I NGG K I
Sbjct: 201 AENRTVPPLAYPMVYQLKQDFPGLEIIINGGIKTI 235
>TIGR_CMR|CBU_0904 [details] [associations]
symbol:CBU_0904 "TIM-barrel protein, yjbN family"
species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR001269 InterPro:IPR004653
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207
PIRSF:PIRSF006621 PROSITE:PS01136 Gene3D:3.20.20.70 GO:GO:0050660
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 HOGENOM:HOG000259834 KO:K05539 OMA:IPPLDYD
ProtClustDB:PRK11815 TIGRFAMs:TIGR00742 RefSeq:NP_819919.1
ProteinModelPortal:Q83D40 PRIDE:Q83D40 GeneID:1208797
KEGG:cbu:CBU_0904 PATRIC:17930509
BioCyc:CBUR227377:GJ7S-895-MONOMER Uniprot:Q83D40
Length = 353
Score = 127 (49.8 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 42/155 (27%), Positives = 69/155 (44%)
Query: 100 EKNKIILQIGTADPER-ALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIAC 158
E++ + LQ+G +DP+ AL A E I++N+GCP + G GA LL ++
Sbjct: 81 EEHPLALQVGGSDPQSLALCARLAEEKGFDEINLNVGCPSGRVIAGRFGACLLKEAELVA 140
Query: 159 NILTTLISNLSIPVSCKIRVFHNEADTIA----LCKRLEACGIIAIGVHGRT---KAERP 211
+ + + + ++IPVS K R ++ D+ K + G +H R K P
Sbjct: 141 DCVAAMSAEVNIPVSVKTRTGVDDQDSYEHLYHFVKTVAEAGCRIFIIHARKAWLKGLSP 200
Query: 212 RHRNRIE-----MIRTLTQHLK-IPVIANGGSKEI 240
+ M+ L Q + +I NGG K I
Sbjct: 201 AENRTVPPLAYPMVYQLKQDFPGLEIIINGGIKTI 235
>TIGR_CMR|SPO_2374 [details] [associations]
symbol:SPO_2374 "tRNA-dihydrouridine synthase A"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0006400 "tRNA
modification" evidence=ISS] [GO:0017150 "tRNA dihydrouridine
synthase activity" evidence=ISS] InterPro:IPR001269
InterPro:IPR004653 InterPro:IPR013785 InterPro:IPR018517
Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136 Gene3D:3.20.20.70
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0050660 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 HOGENOM:HOG000259834 KO:K05539
OMA:IPPLDYD ProtClustDB:PRK11815 TIGRFAMs:TIGR00742
RefSeq:YP_167596.1 ProteinModelPortal:Q5LQV9 GeneID:3194172
KEGG:sil:SPO2374 PATRIC:23378123 Uniprot:Q5LQV9
Length = 344
Score = 125 (49.1 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 29/111 (26%), Positives = 56/111 (50%)
Query: 100 EKNKIILQIGTADPERALEAAKK-VEHDVAAIDINMGCPKQFSLTGGMGAALLSTPDIAC 158
E++ + LQ+G +DPE +AA+ E I++N GCP +G GA L+ P +
Sbjct: 63 EEHPVALQLGGSDPEELAQAARLGAEAGYDEINLNCGCPSDRVQSGTFGAVLMKHPGLVA 122
Query: 159 NILTTLIS--NLSIPVSCKIRVFHNEADTIA--LCKRLEACGIIAIGVHGR 205
+ +T + ++ + V C+I V + +T+ +++ G + +H R
Sbjct: 123 DCVTAMREAVDVEVTVKCRIGVDDQDPETVLPEFLEQIAGAGCQRVIIHAR 173
>UNIPROTKB|J3QKP9 [details] [associations]
symbol:DUS1L "tRNA-dihydrouridine(16/17) synthase
[NAD(P)(+)]-like" species:9606 "Homo sapiens" [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 Pfam:PF01207 Gene3D:3.20.20.70 GO:GO:0050660
EMBL:AC135056 HGNC:HGNC:30086 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 Ensembl:ENST00000578176 Uniprot:J3QKP9
Length = 247
Score = 120 (47.3 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 31/94 (32%), Positives = 46/94 (48%)
Query: 151 LSTPDIACNILTTLISNLSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAER 210
L P + + LS+PV+CKIRVF T+ + LE G + VHGRTK ++
Sbjct: 106 LGCPQMIAKRVLLAHEKLSVPVTCKIRVFPEIDKTVRYAQMLEKAGCQLLTVHGRTKEQK 165
Query: 211 PRHRNRI--EMIRTLTQHLKIPVIANGGSKEIVD 242
E I+ + + + IPV ANG + + D
Sbjct: 166 GPLSGAASWEHIKAVRKAVAIPVFANGNIQCLQD 199
Score = 110 (43.8 bits), Expect = 0.00074, P = 0.00074
Identities = 38/129 (29%), Positives = 60/129 (46%)
Query: 34 ILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTE--RKVNDLLNTIDFVDPLDGS 91
++APMV + L +RLL+ +GA L Y+ L V+ RK N
Sbjct: 20 VVAPMVDQSELAWRLLSRRHGAQLCYTPMLHAQVFVRDANYRKEN--------------- 64
Query: 92 VVFRTCPREKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQFSLTGGMGAALL 151
+ CP ++ +I+Q DPE ++AA + AID+N+GCP+ + + L
Sbjct: 65 LYCEVCPEDR-PLIVQFCANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRVLLAHEKL 123
Query: 152 STPDIACNI 160
S P + C I
Sbjct: 124 SVP-VTCKI 131
>UNIPROTKB|Q8EAJ0 [details] [associations]
symbol:dusA "tRNA-dihydrouridine synthase A" species:211586
"Shewanella oneidensis MR-1" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001269 InterPro:IPR004653 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136
Gene3D:3.20.20.70 GO:GO:0050660 EMBL:AE014299
GenomeReviews:AE014299_GR eggNOG:COG0042 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 HOGENOM:HOG000259834 KO:K05539
OMA:IPPLDYD ProtClustDB:PRK11815 TIGRFAMs:TIGR00742
RefSeq:NP_719443.1 ProteinModelPortal:Q8EAJ0 GeneID:1171552
KEGG:son:SO_3912 PATRIC:23527504 Uniprot:Q8EAJ0
Length = 335
Score = 119 (46.9 bits), Expect = 0.00014, P = 0.00014
Identities = 27/99 (27%), Positives = 50/99 (50%)
Query: 88 LDGSVVFRTCPREKNKIILQIGTADPERALEAAK-KVEHDVAAIDINMGCPKQFSLTGGM 146
L G + T +E++ + LQ+G ++P AK E +++N+GCP G
Sbjct: 53 LHGRGDYLTYNQEEHPLALQLGGSNPVELARCAKLAAERGYDEVNLNVGCPSDRVQNGRF 112
Query: 147 GAALLSTPDIACNILTTLISNLSIPVSCKIRVFHNEADT 185
GA L++ P++ + + + IPV+ K R+ +E D+
Sbjct: 113 GACLMAEPELVAECVDAMKQVVDIPVTVKTRIGIDEQDS 151
>TIGR_CMR|SO_3912 [details] [associations]
symbol:SO_3912 "TIM-barrel protein, yjbN family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR001269 InterPro:IPR004653
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207
PIRSF:PIRSF006621 PROSITE:PS01136 Gene3D:3.20.20.70 GO:GO:0050660
EMBL:AE014299 GenomeReviews:AE014299_GR eggNOG:COG0042
GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082 HOGENOM:HOG000259834
KO:K05539 OMA:IPPLDYD ProtClustDB:PRK11815 TIGRFAMs:TIGR00742
RefSeq:NP_719443.1 ProteinModelPortal:Q8EAJ0 GeneID:1171552
KEGG:son:SO_3912 PATRIC:23527504 Uniprot:Q8EAJ0
Length = 335
Score = 119 (46.9 bits), Expect = 0.00014, P = 0.00014
Identities = 27/99 (27%), Positives = 50/99 (50%)
Query: 88 LDGSVVFRTCPREKNKIILQIGTADPERALEAAK-KVEHDVAAIDINMGCPKQFSLTGGM 146
L G + T +E++ + LQ+G ++P AK E +++N+GCP G
Sbjct: 53 LHGRGDYLTYNQEEHPLALQLGGSNPVELARCAKLAAERGYDEVNLNVGCPSDRVQNGRF 112
Query: 147 GAALLSTPDIACNILTTLISNLSIPVSCKIRVFHNEADT 185
GA L++ P++ + + + IPV+ K R+ +E D+
Sbjct: 113 GACLMAEPELVAECVDAMKQVVDIPVTVKTRIGIDEQDS 151
>UNIPROTKB|E1BGZ1 [details] [associations]
symbol:DUS3L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] [GO:0017150 "tRNA dihydrouridine synthase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001269 InterPro:IPR013785 InterPro:IPR018517
Pfam:PF01207 PROSITE:PS01136 PROSITE:PS50103 Gene3D:3.20.20.70
GO:GO:0050660 GO:GO:0008270 GO:GO:0003676 EMBL:DAAA02019576
GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082 KO:K05544 CTD:56931
OMA:MSEWALL GeneTree:ENSGT00550000075134 IPI:IPI00715519
RefSeq:NP_001193247.1 UniGene:Bt.15641 ProteinModelPortal:E1BGZ1
Ensembl:ENSBTAT00000015715 GeneID:508812 KEGG:bta:508812
NextBio:20868690 Uniprot:E1BGZ1
Length = 650
Score = 123 (48.4 bits), Expect = 0.00014, P = 0.00014
Identities = 48/188 (25%), Positives = 83/188 (44%)
Query: 27 INYSNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVD 86
++ S K+ LAP+ LPFR + +GAD+ E V L++ + LL
Sbjct: 301 LDISGKLYLAPLTTCGNLPFRRICKRFGADVTCGEMAVCTNLLQGQTSEWALLKR----H 356
Query: 87 PLDGSVVFRTCPREKNKIILQIGTADPERALEAAKKVEH--DVAAIDINMGCPKQFSLTG 144
P + +F +Q+ A P+ + A+ + +V +DIN+GCP
Sbjct: 357 PCED--IFG----------VQLEGAFPDTMTKCAELLNRTIEVDFVDINVGCPIDLVFKK 404
Query: 145 GMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFHNEADTIA--LCKRLEACGIIAIGV 202
G G AL++ I+ + L +P++ K+R E +A L L G + +
Sbjct: 405 GGGCALMNRLAKFQQIVRGMNQVLDVPLTVKLRTGVQERVNLAHRLLPDLRDWGAALVTL 464
Query: 203 HGRTKAER 210
HGR++ +R
Sbjct: 465 HGRSREQR 472
>UNIPROTKB|H0YGW8 [details] [associations]
symbol:DUS1L "tRNA-dihydrouridine(16/17) synthase
[NAD(P)(+)]-like" species:9606 "Homo sapiens" [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 Pfam:PF01207 Gene3D:3.20.20.70 GO:GO:0050660
EMBL:AC135056 HGNC:HGNC:30086 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 Ensembl:ENST00000538833 Uniprot:H0YGW8
Length = 298
Score = 118 (46.6 bits), Expect = 0.00014, P = 0.00014
Identities = 29/77 (37%), Positives = 42/77 (54%)
Query: 168 LSIPVSCKIRVFHNEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRI--EMIRTLTQ 225
LS+PV+CKIRVF T+ + LE G + VHGRTK ++ E I+ + +
Sbjct: 8 LSVPVTCKIRVFPEIDKTVRYAQMLEKAGCQLLTVHGRTKEQKGPLSGAASWEHIKAVRK 67
Query: 226 HLKIPVIANGGSKEIVD 242
+ IPV ANG + + D
Sbjct: 68 AVAIPVFANGNIQCLQD 84
>UNIPROTKB|Q9KUX9 [details] [associations]
symbol:dusA "tRNA-dihydrouridine synthase A" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001269
InterPro:IPR004653 InterPro:IPR013785 InterPro:IPR018517
Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136 Gene3D:3.20.20.70
GO:GO:0050660 EMBL:AE003852 GenomeReviews:AE003852_GR
eggNOG:COG0042 GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
KO:K05539 OMA:IPPLDYD ProtClustDB:PRK11815 TIGRFAMs:TIGR00742
PIR:G82330 RefSeq:NP_230033.1 ProteinModelPortal:Q9KUX9
DNASU:2615022 GeneID:2615022 KEGG:vch:VC0379 PATRIC:20079827
Uniprot:Q9KUX9
Length = 327
Score = 118 (46.6 bits), Expect = 0.00017, P = 0.00017
Identities = 30/121 (24%), Positives = 58/121 (47%)
Query: 66 HKLVKTERKVNDLLNTIDFVDPLDGSVVFRTCPREKNKIILQIGTADPERALEAAKKV-E 124
H+L+ + + + T + + G F +E++ + LQ G ++P+ AK E
Sbjct: 24 HRLLSAQTLLYTEMVTTGAI--IHGRGDFLAYNQEEHPVALQFGGSNPKDLAHCAKLAQE 81
Query: 125 HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFHNEAD 184
I++N+GCP G GA L+ PD+ + + + + IPV+ K R+ ++ D
Sbjct: 82 RGYDEINLNVGCPSDRVQNGRFGACLMGEPDLVAECVAAMRAVVDIPVTVKTRIGIDDQD 141
Query: 185 T 185
+
Sbjct: 142 S 142
>TIGR_CMR|VC_0379 [details] [associations]
symbol:VC_0379 "TIM-barrel protein, yjbN family"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001269
InterPro:IPR004653 InterPro:IPR013785 InterPro:IPR018517
Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136 Gene3D:3.20.20.70
GO:GO:0050660 EMBL:AE003852 GenomeReviews:AE003852_GR
eggNOG:COG0042 GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
KO:K05539 OMA:IPPLDYD ProtClustDB:PRK11815 TIGRFAMs:TIGR00742
PIR:G82330 RefSeq:NP_230033.1 ProteinModelPortal:Q9KUX9
DNASU:2615022 GeneID:2615022 KEGG:vch:VC0379 PATRIC:20079827
Uniprot:Q9KUX9
Length = 327
Score = 118 (46.6 bits), Expect = 0.00017, P = 0.00017
Identities = 30/121 (24%), Positives = 58/121 (47%)
Query: 66 HKLVKTERKVNDLLNTIDFVDPLDGSVVFRTCPREKNKIILQIGTADPERALEAAKKV-E 124
H+L+ + + + T + + G F +E++ + LQ G ++P+ AK E
Sbjct: 24 HRLLSAQTLLYTEMVTTGAI--IHGRGDFLAYNQEEHPVALQFGGSNPKDLAHCAKLAQE 81
Query: 125 HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACNILTTLISNLSIPVSCKIRVFHNEAD 184
I++N+GCP G GA L+ PD+ + + + + IPV+ K R+ ++ D
Sbjct: 82 RGYDEINLNVGCPSDRVQNGRFGACLMGEPDLVAECVAAMRAVVDIPVTVKTRIGIDDQD 141
Query: 185 T 185
+
Sbjct: 142 S 142
>POMBASE|SPAC16.04 [details] [associations]
symbol:dus3 "tRNA dihydrouridine synthase Dus3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006400 "tRNA modification" evidence=ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0017150 "tRNA dihydrouridine synthase
activity" evidence=ISO] [GO:0050660 "flavin adenine dinucleotide
binding" evidence=IEA] InterPro:IPR000571 InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136
PROSITE:PS50103 PomBase:SPAC16.04 GO:GO:0005634 GO:GO:0005737
EMBL:CU329670 GenomeReviews:CU329670_GR Gene3D:3.20.20.70
GO:GO:0050660 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
eggNOG:COG0042 GO:GO:0017150 PANTHER:PTHR11082 KO:K05544
HOGENOM:HOG000240610 OrthoDB:EOG4M950K PIR:T37732
RefSeq:NP_594572.1 ProteinModelPortal:Q9UTH9 STRING:Q9UTH9
EnsemblFungi:SPAC16.04.1 GeneID:2541573 KEGG:spo:SPAC16.04
OMA:PWIFEEV NextBio:20802667 Uniprot:Q9UTH9
Length = 617
Score = 120 (47.3 bits), Expect = 0.00028, P = 0.00028
Identities = 50/194 (25%), Positives = 88/194 (45%)
Query: 27 INYSNKIILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVD 86
I++ ++ ILAP+ + PFR L GAD YSE + + L++ + L+ +++
Sbjct: 235 IDWRDRKILAPLTTVGNPPFRRLCGSLGADTFYSEMAMCYPLMQGHQPEWALVRGLNYE- 293
Query: 87 PLDGSVVFRTCPREKNKIIL--QIGTADPERALEAAKKVEHD---VAAIDINMGCPKQFS 141
R R + IL Q+ T +A + A+ + V +D+N GCP
Sbjct: 294 --------REMMRGGRRGILGVQLATGKLWQATKTAQVIAEQCDGVDFLDLNCGCPIDLV 345
Query: 142 LTGGMGAALLSTPDIACNILTTL--ISNLSIPVSCKIRVFHNEADTIA--LCKRL-EACG 196
G G++LL P L + +S IPV+ K+R+ + + + L R+
Sbjct: 346 FRQGAGSSLLENPGRLLRNLQGMDAVSG-QIPVTVKLRMGNKDDHPVVKNLIGRIFNETN 404
Query: 197 IIAIGVHGRTKAER 210
A +HGR++ +R
Sbjct: 405 TSAATLHGRSRQQR 418
>GENEDB_PFALCIPARUM|PFI0920c [details] [associations]
symbol:PFI0920c "Dihydrouridine synthase,
putative" species:5833 "Plasmodium falciparum" [GO:0020011
"apicoplast" evidence=ISS] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136 Gene3D:3.20.20.70
GO:GO:0050660 GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
KO:K05539 GO:GO:0020011 EMBL:AL844508 RefSeq:XP_001352059.1
ProteinModelPortal:Q8I2W5 EnsemblProtists:PFI0920c:mRNA
GeneID:813464 KEGG:pfa:PFI0920c EuPathDB:PlasmoDB:PF3D7_0918800
HOGENOM:HOG000282922 ProtClustDB:CLSZ2432702 Uniprot:Q8I2W5
Length = 577
Score = 119 (46.9 bits), Expect = 0.00032, P = 0.00032
Identities = 61/227 (26%), Positives = 99/227 (43%)
Query: 33 IILAPMVRMNTLPFRLLA--LDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDG 90
I +APM+ + FR + + A L ++E +VD+ L+ +N+L + F D
Sbjct: 200 IQVAPMINVTNRHFRAMVRIITKRAQL-WTEMIVDNTLLYN---LNNLEEHLGF----DN 251
Query: 91 SVVFRTCPREKNKIILQIGTADPERALEAAKKVEH-DVAAIDINMGCPK-QFSLTGGMGA 148
+ ++ I+ Q+G D EAA VE I+IN+GCP + + G GA
Sbjct: 252 N---------EHPIVCQLGGCDMNSMSEAAILVEQAGYDEININVGCPSTKVANKGAFGA 302
Query: 149 ALLSTPDIACNILTTLISNLSIPVSCKIRVFHNEADTIALCKR-LEACGIIAIG---VHG 204
+L+ P+ NI+ + + IPV+ KIR + D+ K +E + VH
Sbjct: 303 SLMKNPEQVRNIVYEIKKKVQIPVTVKIRTGVDNYDSFDFLKTFIETVSSVGCNHFIVHA 362
Query: 205 RT---KAERPRHRNRIEMIR--------TLTQHLKIPVIANGGSKEI 240
R K P+ +I + L HLK + NGG + I
Sbjct: 363 RKAWLKGLDPKQNRKIPPLEYYKVYDLCKLYPHLKFTL--NGGIQTI 407
>UNIPROTKB|Q8I2W5 [details] [associations]
symbol:PFI0920c "Dihydrouridine synthase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
evidence=ISS] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136 Gene3D:3.20.20.70
GO:GO:0050660 GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
KO:K05539 GO:GO:0020011 EMBL:AL844508 RefSeq:XP_001352059.1
ProteinModelPortal:Q8I2W5 EnsemblProtists:PFI0920c:mRNA
GeneID:813464 KEGG:pfa:PFI0920c EuPathDB:PlasmoDB:PF3D7_0918800
HOGENOM:HOG000282922 ProtClustDB:CLSZ2432702 Uniprot:Q8I2W5
Length = 577
Score = 119 (46.9 bits), Expect = 0.00032, P = 0.00032
Identities = 61/227 (26%), Positives = 99/227 (43%)
Query: 33 IILAPMVRMNTLPFRLLA--LDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDG 90
I +APM+ + FR + + A L ++E +VD+ L+ +N+L + F D
Sbjct: 200 IQVAPMINVTNRHFRAMVRIITKRAQL-WTEMIVDNTLLYN---LNNLEEHLGF----DN 251
Query: 91 SVVFRTCPREKNKIILQIGTADPERALEAAKKVEH-DVAAIDINMGCPK-QFSLTGGMGA 148
+ ++ I+ Q+G D EAA VE I+IN+GCP + + G GA
Sbjct: 252 N---------EHPIVCQLGGCDMNSMSEAAILVEQAGYDEININVGCPSTKVANKGAFGA 302
Query: 149 ALLSTPDIACNILTTLISNLSIPVSCKIRVFHNEADTIALCKR-LEACGIIAIG---VHG 204
+L+ P+ NI+ + + IPV+ KIR + D+ K +E + VH
Sbjct: 303 SLMKNPEQVRNIVYEIKKKVQIPVTVKIRTGVDNYDSFDFLKTFIETVSSVGCNHFIVHA 362
Query: 205 RT---KAERPRHRNRIEMIR--------TLTQHLKIPVIANGGSKEI 240
R K P+ +I + L HLK + NGG + I
Sbjct: 363 RKAWLKGLDPKQNRKIPPLEYYKVYDLCKLYPHLKFTL--NGGIQTI 407
>UNIPROTKB|F8WEL2 [details] [associations]
symbol:DUS4L "tRNA-dihydrouridine(20a/20b) synthase
[NAD(P)+]-like" species:9606 "Homo sapiens" [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 Pfam:PF01207 Gene3D:3.20.20.70 GO:GO:0050660
EMBL:AC004839 EMBL:AC002381 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 HGNC:HGNC:21517 IPI:IPI00925668
ProteinModelPortal:F8WEL2 SMR:F8WEL2 Ensembl:ENST00000443233
ArrayExpress:F8WEL2 Bgee:F8WEL2 Uniprot:F8WEL2
Length = 119
Score = 95 (38.5 bits), Expect = 0.00034, P = 0.00034
Identities = 35/106 (33%), Positives = 47/106 (44%)
Query: 34 ILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDGSVV 93
+ APMVR + L FR L Y DL Y+ +V VK+ K D T + D
Sbjct: 30 VCAPMVRYSKLAFRTLVRKYSCDLCYTPMIVAADFVKSI-KARDSEFTTNQGD------- 81
Query: 94 FRTCPREKNKIILQIGTADPERALEAAKKVEHDVAAIDINMGCPKQ 139
CP +I+Q D +AA+ V IDIN GCP++
Sbjct: 82 ---CP-----LIVQFAANDARLLSDAARIVCPYANGIDINCGCPQR 119
>UNIPROTKB|Q8EFG7 [details] [associations]
symbol:dusC "tRNA-dihydrouridine synthase C" species:211586
"Shewanella oneidensis MR-1" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001269 InterPro:IPR013785 Pfam:PF01207
PIRSF:PIRSF006621 Gene3D:3.20.20.70 GO:GO:0050660 EMBL:AE014299
GenomeReviews:AE014299_GR eggNOG:COG0042 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 HOGENOM:HOG000217854 KO:K05541
OMA:FYHVARI RefSeq:NP_717612.1 ProteinModelPortal:Q8EFG7
GeneID:1169758 KEGG:son:SO_2006 PATRIC:23523633
ProtClustDB:CLSK906542 Uniprot:Q8EFG7
Length = 315
Score = 115 (45.5 bits), Expect = 0.00034, P = 0.00034
Identities = 48/175 (27%), Positives = 79/175 (45%)
Query: 77 DLLNT--IDFVDPLDGSVVF-RTCPR--------EKNKIILQIGTADPERALE-AAKKVE 124
DLL T + VD L VF + CP + +Q+ +P E A + +E
Sbjct: 27 DLLVTEFVRVVDQLLPEKVFLKLCPELLSGGYTPSGTPVRVQLLGQEPNCMAENAMRAIE 86
Query: 125 HDVAAIDINMGCP-KQFSLTGGMGAALLSTPDIACNILTTLISNLSI--PVSCKIRV-FH 180
+D N GCP K + + G GA LL P+ +I+ + + PV+ KIR+ +
Sbjct: 87 LGSHGVDANFGCPAKMVNRSNG-GAVLLQYPNTIHDIVRAMRQAVPAEHPVTAKIRLGYE 145
Query: 181 NEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANG 235
+++ + + G + +H R+K + + E I + + L IPVIANG
Sbjct: 146 DKSLFMENALAVYEAGATELAIHARSKVDGYKPPAYWEYITEVRERLPIPVIANG 200
>TIGR_CMR|SO_2006 [details] [associations]
symbol:SO_2006 "NifR3/Smm1 family protein" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR001269 InterPro:IPR013785 Pfam:PF01207
PIRSF:PIRSF006621 Gene3D:3.20.20.70 GO:GO:0050660 EMBL:AE014299
GenomeReviews:AE014299_GR eggNOG:COG0042 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 HOGENOM:HOG000217854 KO:K05541
OMA:FYHVARI RefSeq:NP_717612.1 ProteinModelPortal:Q8EFG7
GeneID:1169758 KEGG:son:SO_2006 PATRIC:23523633
ProtClustDB:CLSK906542 Uniprot:Q8EFG7
Length = 315
Score = 115 (45.5 bits), Expect = 0.00034, P = 0.00034
Identities = 48/175 (27%), Positives = 79/175 (45%)
Query: 77 DLLNT--IDFVDPLDGSVVF-RTCPR--------EKNKIILQIGTADPERALE-AAKKVE 124
DLL T + VD L VF + CP + +Q+ +P E A + +E
Sbjct: 27 DLLVTEFVRVVDQLLPEKVFLKLCPELLSGGYTPSGTPVRVQLLGQEPNCMAENAMRAIE 86
Query: 125 HDVAAIDINMGCP-KQFSLTGGMGAALLSTPDIACNILTTLISNLSI--PVSCKIRV-FH 180
+D N GCP K + + G GA LL P+ +I+ + + PV+ KIR+ +
Sbjct: 87 LGSHGVDANFGCPAKMVNRSNG-GAVLLQYPNTIHDIVRAMRQAVPAEHPVTAKIRLGYE 145
Query: 181 NEADTIALCKRLEACGIIAIGVHGRTKAERPRHRNRIEMIRTLTQHLKIPVIANG 235
+++ + + G + +H R+K + + E I + + L IPVIANG
Sbjct: 146 DKSLFMENALAVYEAGATELAIHARSKVDGYKPPAYWEYITEVRERLPIPVIANG 200
>UNIPROTKB|P32695 [details] [associations]
symbol:dusA "tRNA-dihydrouridine synthase A" species:83333
"Escherichia coli K-12" [GO:0050660 "flavin adenine dinucleotide
binding" evidence=IEA] [GO:0002943 "tRNA dihydrouridine synthesis"
evidence=IEA;IMP] [GO:0017150 "tRNA dihydrouridine synthase
activity" evidence=IEA;IMP] [GO:0055114 "oxidation-reduction
process" evidence=IEA] InterPro:IPR001269 InterPro:IPR004653
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207
PIRSF:PIRSF006621 PROSITE:PS01136 Gene3D:3.20.20.70 GO:GO:0050660
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR EMBL:U00006 eggNOG:COG0042 GO:GO:0017150
PANTHER:PTHR11082 RefSeq:NP_418473.2 RefSeq:YP_492192.1
ProteinModelPortal:P32695 SMR:P32695 PRIDE:P32695
EnsemblBacteria:EBESCT00000004365 EnsemblBacteria:EBESCT00000018223
GeneID:12930614 GeneID:948558 KEGG:ecj:Y75_p3936 KEGG:eco:b4049
PATRIC:32123637 EchoBASE:EB1876 EcoGene:EG11932
HOGENOM:HOG000259834 KO:K05539 OMA:IPPLDYD ProtClustDB:PRK11815
BioCyc:EcoCyc:EG11932-MONOMER BioCyc:ECOL316407:JW5950-MONOMER
BioCyc:MetaCyc:EG11932-MONOMER Genevestigator:P32695
TIGRFAMs:TIGR00742 Uniprot:P32695
Length = 330
Score = 115 (45.5 bits), Expect = 0.00038, P = 0.00038
Identities = 27/92 (29%), Positives = 47/92 (51%)
Query: 100 EKNKIILQIGTADPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIAC 158
E++ + LQ+G +DP + AK E I++N+GCP G GA L+ +
Sbjct: 62 EEHPVALQLGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQNGMFGACLMGNAQLVA 121
Query: 159 NILTTLISNLSIPVSCKIRVFHNEADTIA-LC 189
+ + + +SIPV+ K R+ ++ D+ LC
Sbjct: 122 DCVKAMRDVVSIPVTVKTRIGIDDQDSYEFLC 153
>UNIPROTKB|Q48A03 [details] [associations]
symbol:CPS_0353 "tRNA-dihydrouridine synthase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001269 InterPro:IPR004653
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207
PIRSF:PIRSF006621 PROSITE:PS01136 Gene3D:3.20.20.70 GO:GO:0050660
EMBL:CP000083 GenomeReviews:CP000083_GR eggNOG:COG0042
GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082 HOGENOM:HOG000259834
KO:K05539 OMA:IPPLDYD ProtClustDB:PRK11815 TIGRFAMs:TIGR00742
RefSeq:YP_267111.1 ProteinModelPortal:Q48A03 STRING:Q48A03
GeneID:3519427 KEGG:cps:CPS_0353 PATRIC:21464085
BioCyc:CPSY167879:GI48-448-MONOMER Uniprot:Q48A03
Length = 335
Score = 114 (45.2 bits), Expect = 0.00050, P = 0.00050
Identities = 25/86 (29%), Positives = 47/86 (54%)
Query: 101 KNKIILQIGTADPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACN 159
++ ++LQ+G +D + E AK E + ++IN+GCP G GA L++ P +
Sbjct: 70 EHPLVLQLGGSDVKAMTECAKIAEQYGYDEVNINVGCPSDRVQNGRFGACLMAEPALVAQ 129
Query: 160 ILTTLISNLSIPVSCKIRVFHNEADT 185
+ + S +IPV+ K R+ ++ D+
Sbjct: 130 CVNQMQSATNIPVTVKSRIGIDDLDS 155
>TIGR_CMR|CPS_0353 [details] [associations]
symbol:CPS_0353 "TIM-barrel protein, yjbN family"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001269 InterPro:IPR004653
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207
PIRSF:PIRSF006621 PROSITE:PS01136 Gene3D:3.20.20.70 GO:GO:0050660
EMBL:CP000083 GenomeReviews:CP000083_GR eggNOG:COG0042
GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082 HOGENOM:HOG000259834
KO:K05539 OMA:IPPLDYD ProtClustDB:PRK11815 TIGRFAMs:TIGR00742
RefSeq:YP_267111.1 ProteinModelPortal:Q48A03 STRING:Q48A03
GeneID:3519427 KEGG:cps:CPS_0353 PATRIC:21464085
BioCyc:CPSY167879:GI48-448-MONOMER Uniprot:Q48A03
Length = 335
Score = 114 (45.2 bits), Expect = 0.00050, P = 0.00050
Identities = 25/86 (29%), Positives = 47/86 (54%)
Query: 101 KNKIILQIGTADPERALEAAKKVE-HDVAAIDINMGCPKQFSLTGGMGAALLSTPDIACN 159
++ ++LQ+G +D + E AK E + ++IN+GCP G GA L++ P +
Sbjct: 70 EHPLVLQLGGSDVKAMTECAKIAEQYGYDEVNINVGCPSDRVQNGRFGACLMAEPALVAQ 129
Query: 160 ILTTLISNLSIPVSCKIRVFHNEADT 185
+ + S +IPV+ K R+ ++ D+
Sbjct: 130 CVNQMQSATNIPVTVKSRIGIDDLDS 155
>ASPGD|ASPL0000051905 [details] [associations]
symbol:AN0818 species:162425 "Emericella nidulans"
[GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0017150 "tRNA dihydrouridine synthase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006400 "tRNA modification"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136
PROSITE:PS50103 GO:GO:0005634 GO:GO:0005737 Gene3D:3.20.20.70
EMBL:BN001308 GO:GO:0050660 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 EMBL:AACD01000013 eggNOG:COG0042 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 KO:K05544 HOGENOM:HOG000240610
RefSeq:XP_658422.1 ProteinModelPortal:Q5BF62 STRING:Q5BF62
EnsemblFungi:CADANIAT00001842 GeneID:2876594 KEGG:ani:AN0818.2
OMA:GTTRRFL OrthoDB:EOG4M950K Uniprot:Q5BF62
Length = 714
Score = 117 (46.2 bits), Expect = 0.00072, P = 0.00072
Identities = 42/153 (27%), Positives = 69/153 (45%)
Query: 35 LAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTERKVNDLLNTIDFVDPLDGSVVF 94
LAP+ LPFR L ++ GA L YSE + L++ + L+ + + L +V
Sbjct: 309 LAPLTTQGNLPFRRLCVELGAQLTYSEMALSMPLIQGHKPEWALMRAHE-TEALPPTVSA 367
Query: 95 RTCPREK--NKIILQIGT--ADPE-----RALEAAKKVEHDVAAIDINMGCPKQFSLTGG 145
R + N ++ G A + +A E + ++ ID+N GCP G
Sbjct: 368 RASVVQDYDNSKDMKFGAQIAGNKYRWVMKATEVLSSLTPNLRVIDLNCGCPIDLLYREG 427
Query: 146 MGAALLSTPDIACNILTTLIS-NLSIPVSCKIR 177
G+ALL P +L + + + IP++ KIR
Sbjct: 428 SGSALLDAPSKLEKMLRGMNAVSEQIPITVKIR 460
>UNIPROTKB|A4RLF4 [details] [associations]
symbol:DUS3 "tRNA-dihydrouridine(47) synthase [NAD(P)(+)]"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000571
InterPro:IPR001269 InterPro:IPR013785 InterPro:IPR018517
Pfam:PF01207 PROSITE:PS01136 PROSITE:PS50103 GO:GO:0005634
GO:GO:0005737 Gene3D:3.20.20.70 GO:GO:0050660 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 EMBL:CM001232 eggNOG:COG0042
GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082 KO:K05544
OrthoDB:EOG4M950K RefSeq:XP_003714097.1 ProteinModelPortal:A4RLF4
STRING:A4RLF4 EnsemblFungi:MGG_01205T0 GeneID:2679761
KEGG:mgr:MGG_01205 Uniprot:A4RLF4
Length = 739
Score = 117 (46.2 bits), Expect = 0.00075, P = 0.00075
Identities = 44/175 (25%), Positives = 79/175 (45%)
Query: 34 ILAPMVRMNTLPFRLLALDYGADLVYSEELVDHKLVKTER------KVNDLLNTIDFVDP 87
+LAP+ LPFR L +D GA YSE + +V+ ++ K ++ + P
Sbjct: 327 VLAPLTTQGNLPFRRLCVDLGAQGTYSEMAMAKPIVQGQQSEWALMKAHESETRPPTLSP 386
Query: 88 ---LDGSVVFRTCPREKN-KIILQIGTADPERALEAAKKVEH---DVAAIDINMGCPKQF 140
S + + ++ + QI + A++AA+ + + ID+N GCP
Sbjct: 387 ETLASNSPIVKVYDNSRDLRFGAQISASSHPLAIKAAECLTTFLPHLRLIDLNCGCPIDM 446
Query: 141 SLTGGMGAALLSTPDIACNILTTL--ISNLSIPVSCKIRVFHNEADTIALCKRLE 193
G G+ALL + I+ + +S +P++CK+R+ E +A K +E
Sbjct: 447 IYKAGAGSALLEQHNKIERIIRGMNAVSG-EVPITCKLRIGVKENHPLAK-KNIE 499
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.139 0.405 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 306 306 0.00099 115 3 11 22 0.49 33
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 126
No. of states in DFA: 592 (63 KB)
Total size of DFA: 193 KB (2110 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 25.91u 0.12s 26.03t Elapsed: 00:00:03
Total cpu time: 25.93u 0.12s 26.05t Elapsed: 00:00:03
Start: Thu Aug 15 15:37:43 2013 End: Thu Aug 15 15:37:46 2013
WARNINGS ISSUED: 1