BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy4400
         (157 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|1ML4|A Chain A, The Pala-Liganded Aspartate Transcarbamoylase Catalytic
           Subunit From Pyrococcus Abyssi
          Length = 308

 Score = 74.3 bits (181), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 49/120 (40%), Positives = 61/120 (50%), Gaps = 11/120 (9%)

Query: 35  IAPEFDSDPRAAYFRQAEYGM-YVRMALLTMVLGRDSALTYSNTPK----------KSCG 83
           I+PE    PR       E GM  V    L  V+G+   L  +   K          K  G
Sbjct: 187 ISPELLRMPRHIVEELREKGMKVVETTTLEDVIGKLDVLYVTRIQKERFPDEQEYLKVKG 246

Query: 84  LYIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLG 143
            Y V  K++ KAK ++ +MHPLPRV EI PE D+   A YFRQ   G+ VRMALL +VLG
Sbjct: 247 SYQVNLKVLEKAKDELRIMHPLPRVDEIHPEVDNTKHAIYFRQVFNGVPVRMALLALVLG 306



 Score = 70.5 bits (171), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 34/61 (55%), Positives = 42/61 (68%)

Query: 7   GLYIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVL 66
           G Y V  K++ KAK ++ +MHPLPRV EI PE D+   A YFRQ   G+ VRMALL +VL
Sbjct: 246 GSYQVNLKVLEKAKDELRIMHPLPRVDEIHPEVDNTKHAIYFRQVFNGVPVRMALLALVL 305

Query: 67  G 67
           G
Sbjct: 306 G 306


>pdb|3MPU|A Chain A, Crystal Structure Of The C47aA241C DISULFIDE-Linked E.
           Coli Aspartate Transcarbamoylase Holoenzyme
 pdb|3MPU|C Chain C, Crystal Structure Of The C47aA241C DISULFIDE-Linked E.
           Coli Aspartate Transcarbamoylase Holoenzyme
 pdb|3MPU|E Chain E, Crystal Structure Of The C47aA241C DISULFIDE-Linked E.
           Coli Aspartate Transcarbamoylase Holoenzyme
 pdb|3NPM|A Chain A, Crystal Structure Of The C47aA241C DISULFIDE-Linked C6
           Aspartate Transcarbamoylase Enzyme
          Length = 310

 Score = 67.8 bits (164), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 32/74 (43%), Positives = 45/74 (60%), Gaps = 3/74 (4%)

Query: 78  PKKSCGL---YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVR 134
           P + C +   +++    +  AK+ M V+HPLPRV EIA + D  P A YF+QA  G++ R
Sbjct: 237 PSEYCNVKAQFVLRASDLHNAKANMKVLHPLPRVDEIATDVDKTPHAWYFQQAGNGIFAR 296

Query: 135 MALLTMVLGRDSAL 148
            ALL +VL RD  L
Sbjct: 297 QALLALVLNRDLVL 310



 Score = 66.6 bits (161), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 41/64 (64%)

Query: 9   YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLGR 68
           +++    +  AK+ M V+HPLPRV EIA + D  P A YF+QA  G++ R ALL +VL R
Sbjct: 247 FVLRASDLHNAKANMKVLHPLPRVDEIATDVDKTPHAWYFQQAGNGIFARQALLALVLNR 306

Query: 69  DSAL 72
           D  L
Sbjct: 307 DLVL 310


>pdb|1SKU|A Chain A, E. Coli Aspartate Transcarbamylase 240's Loop Mutant
           (K244n)
 pdb|1SKU|C Chain C, E. Coli Aspartate Transcarbamylase 240's Loop Mutant
           (K244n)
          Length = 310

 Score = 66.6 bits (161), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 41/64 (64%)

Query: 9   YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLGR 68
           +++    +  AK+ M V+HPLPRV EIA + D  P A YF+QA  G++ R ALL +VL R
Sbjct: 247 FVLRASDLHNAKANMKVLHPLPRVDEIATDVDKTPHAWYFQQAGNGIFARQALLALVLNR 306

Query: 69  DSAL 72
           D  L
Sbjct: 307 DLVL 310



 Score = 66.6 bits (161), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 41/64 (64%)

Query: 85  YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLGR 144
           +++    +  AK+ M V+HPLPRV EIA + D  P A YF+QA  G++ R ALL +VL R
Sbjct: 247 FVLRASDLHNAKANMKVLHPLPRVDEIATDVDKTPHAWYFQQAGNGIFARQALLALVLNR 306

Query: 145 DSAL 148
           D  L
Sbjct: 307 DLVL 310


>pdb|1RAA|A Chain A, Crystal Structure Of Ctp-Ligated T State Aspartate
           Transcarbamoylase At 2.5 Angstroms Resolution:
           Implications For Atcase Mutants And The Mechanism Of
           Negative Cooperativity
 pdb|1RAA|C Chain C, Crystal Structure Of Ctp-Ligated T State Aspartate
           Transcarbamoylase At 2.5 Angstroms Resolution:
           Implications For Atcase Mutants And The Mechanism Of
           Negative Cooperativity
 pdb|1RAB|A Chain A, Crystal Structure Of Ctp-Ligated T State Aspartate
           Transcarbamoylase At 2.5 Angstroms Resolution:
           Implications For Atcase Mutants And The Mechanism Of
           Negative Cooperativity
 pdb|1RAB|C Chain C, Crystal Structure Of Ctp-Ligated T State Aspartate
           Transcarbamoylase At 2.5 Angstroms Resolution:
           Implications For Atcase Mutants And The Mechanism Of
           Negative Cooperativity
 pdb|1RAC|A Chain A, Crystal Structure Of Ctp-Ligated T State Aspartate
           Transcarbamoylase At 2.5 Angstroms Resolution:
           Implications For Atcase Mutants And The Mechanism Of
           Negative Cooperativity
 pdb|1RAC|C Chain C, Crystal Structure Of Ctp-Ligated T State Aspartate
           Transcarbamoylase At 2.5 Angstroms Resolution:
           Implications For Atcase Mutants And The Mechanism Of
           Negative Cooperativity
 pdb|1RAD|A Chain A, Crystal Structure Of Ctp-ligated T State Aspartate
           Transcarbamoylase At 2.5 Angstroms Resolution:
           Implications For Atcase Mutants And The Mechanism Of
           Negative Cooperativity
 pdb|1RAD|C Chain C, Crystal Structure Of Ctp-ligated T State Aspartate
           Transcarbamoylase At 2.5 Angstroms Resolution:
           Implications For Atcase Mutants And The Mechanism Of
           Negative Cooperativity
 pdb|1RAE|A Chain A, Crystal Structure Of Ctp-ligated T State Aspartate
           Transcarbamoylase At 2.5 Angstroms Resolution:
           Implications For Atcase Mutants And The Mechanism Of
           Negative Cooperativity
 pdb|1RAE|C Chain C, Crystal Structure Of Ctp-ligated T State Aspartate
           Transcarbamoylase At 2.5 Angstroms Resolution:
           Implications For Atcase Mutants And The Mechanism Of
           Negative Cooperativity
 pdb|1RAF|A Chain A, Crystal Structure Of Ctp-Ligated T State Aspartate
           Transcarbamoylase At 2.5 Angstroms Resolution:
           Implications For Atcase Mutants And The Mechanism Of
           Negative Cooperativity
 pdb|1RAF|C Chain C, Crystal Structure Of Ctp-Ligated T State Aspartate
           Transcarbamoylase At 2.5 Angstroms Resolution:
           Implications For Atcase Mutants And The Mechanism Of
           Negative Cooperativity
 pdb|1RAG|A Chain A, Crystal Structure Of Ctp-Ligated T State Aspartate
           Transcarbamoylase At 2.5 Angstroms Resolution:
           Implications For Atcase Mutants And The Mechanism Of
           Negative Cooperativity
 pdb|1RAG|C Chain C, Crystal Structure Of Ctp-Ligated T State Aspartate
           Transcarbamoylase At 2.5 Angstroms Resolution:
           Implications For Atcase Mutants And The Mechanism Of
           Negative Cooperativity
 pdb|1RAH|A Chain A, Crystal Structure Of Ctp-Ligated T State Aspartate
           Transcarbamoylase At 2.5 Angstroms Resolution:
           Implications For Atcase Mutants And The Mechanism Of
           Negative Cooperativity
 pdb|1RAH|C Chain C, Crystal Structure Of Ctp-Ligated T State Aspartate
           Transcarbamoylase At 2.5 Angstroms Resolution:
           Implications For Atcase Mutants And The Mechanism Of
           Negative Cooperativity
 pdb|1RAI|A Chain A, Crystal Structure Of Ctp-Ligated T State Aspartate
           Transcarbamoylase At 2.5 Angstroms Resolution:
           Implications For Atcase Mutants And The Mechanism Of
           Negative Cooperativity
 pdb|1RAI|C Chain C, Crystal Structure Of Ctp-Ligated T State Aspartate
           Transcarbamoylase At 2.5 Angstroms Resolution:
           Implications For Atcase Mutants And The Mechanism Of
           Negative Cooperativity
 pdb|3CSU|A Chain A, Catalytic Trimer Of Escherichia Coli Aspartate
           Transcarbamoylase
 pdb|3CSU|B Chain B, Catalytic Trimer Of Escherichia Coli Aspartate
           Transcarbamoylase
 pdb|3CSU|C Chain C, Catalytic Trimer Of Escherichia Coli Aspartate
           Transcarbamoylase
 pdb|1Q95|A Chain A, Aspartate Transcarbamylase (Atcase) Of Escherichia Coli: A
           New Crystalline R State Bound To Pala, Or To Product
           Analogues Phosphate And Citrate
 pdb|1Q95|B Chain B, Aspartate Transcarbamylase (Atcase) Of Escherichia Coli: A
           New Crystalline R State Bound To Pala, Or To Product
           Analogues Phosphate And Citrate
 pdb|1Q95|C Chain C, Aspartate Transcarbamylase (Atcase) Of Escherichia Coli: A
           New Crystalline R State Bound To Pala, Or To Product
           Analogues Phosphate And Citrate
 pdb|1Q95|D Chain D, Aspartate Transcarbamylase (Atcase) Of Escherichia Coli: A
           New Crystalline R State Bound To Pala, Or To Product
           Analogues Phosphate And Citrate
 pdb|1Q95|E Chain E, Aspartate Transcarbamylase (Atcase) Of Escherichia Coli: A
           New Crystalline R State Bound To Pala, Or To Product
           Analogues Phosphate And Citrate
 pdb|1Q95|F Chain F, Aspartate Transcarbamylase (Atcase) Of Escherichia Coli: A
           New Crystalline R State Bound To Pala, Or To Product
           Analogues Phosphate And Citrate
 pdb|1R0B|A Chain A, Aspartate Transcarbamylase (Atcase) Of Escherichia Coli: A
           New Crystalline R State Bound To Pala, Or To Product
           Analogues Phosphate And Citrate
 pdb|1R0B|B Chain B, Aspartate Transcarbamylase (Atcase) Of Escherichia Coli: A
           New Crystalline R State Bound To Pala, Or To Product
           Analogues Phosphate And Citrate
 pdb|1R0B|C Chain C, Aspartate Transcarbamylase (Atcase) Of Escherichia Coli: A
           New Crystalline R State Bound To Pala, Or To Product
           Analogues Phosphate And Citrate
 pdb|1R0B|D Chain D, Aspartate Transcarbamylase (Atcase) Of Escherichia Coli: A
           New Crystalline R State Bound To Pala, Or To Product
           Analogues Phosphate And Citrate
 pdb|1R0B|E Chain E, Aspartate Transcarbamylase (Atcase) Of Escherichia Coli: A
           New Crystalline R State Bound To Pala, Or To Product
           Analogues Phosphate And Citrate
 pdb|1R0B|F Chain F, Aspartate Transcarbamylase (Atcase) Of Escherichia Coli: A
           New Crystalline R State Bound To Pala, Or To Product
           Analogues Phosphate And Citrate
 pdb|1R0C|A Chain A, Products In The T State Of Aspartate Transcarbamylase:
           Crystal Structure Of The Phosphate And
           N-Carbamyl-L-Aspartate Ligated Enzyme
 pdb|1R0C|G Chain G, Products In The T State Of Aspartate Transcarbamylase:
           Crystal Structure Of The Phosphate And
           N-Carbamyl-L-Aspartate Ligated Enzyme
 pdb|1ZA1|A Chain A, Structure Of Wild-Type E. Coli Aspartate Transcarbamoylase
           In The Presence Of Ctp At 2.20 A Resolution
 pdb|1ZA1|C Chain C, Structure Of Wild-Type E. Coli Aspartate Transcarbamoylase
           In The Presence Of Ctp At 2.20 A Resolution
 pdb|1ZA2|A Chain A, Structure Of Wild-Type E. Coli Aspartate Transcarbamoylase
           In The Presence Of Ctp, Carbamoyl Phosphate At 2.50 A
           Resolution
 pdb|1ZA2|C Chain C, Structure Of Wild-Type E. Coli Aspartate Transcarbamoylase
           In The Presence Of Ctp, Carbamoyl Phosphate At 2.50 A
           Resolution
 pdb|2AIR|A Chain A, T-State Active Site Of Aspartate Transcarbamylase:crystal
           Structure Of The Carbamyl Phosphate And L-Alanosine
           Ligated Enzyme
 pdb|2AIR|G Chain G, T-State Active Site Of Aspartate Transcarbamylase:crystal
           Structure Of The Carbamyl Phosphate And L-Alanosine
           Ligated Enzyme
 pdb|2FZC|A Chain A, The Structure Of Wild-Type E. Coli Aspartate
           Transcarbamoylase In Complex With Novel T State
           Inhibitors At 2.10 Resolution
 pdb|2FZC|C Chain C, The Structure Of Wild-Type E. Coli Aspartate
           Transcarbamoylase In Complex With Novel T State
           Inhibitors At 2.10 Resolution
 pdb|2FZG|A Chain A, The Structure Of Wild-Type E. Coli Aspartate
           Transcarbamoylase In Complex With Novel T State
           Inhibitors At 2.25 Resolution
 pdb|2FZG|C Chain C, The Structure Of Wild-Type E. Coli Aspartate
           Transcarbamoylase In Complex With Novel T State
           Inhibitors At 2.25 Resolution
 pdb|2FZK|A Chain A, The Structure Of Wild-Type E. Coli Aspartate
           Transcarbamoylase In Complex With Novel T State
           Inhibitors At 2.50 Resolution
 pdb|2FZK|C Chain C, The Structure Of Wild-Type E. Coli Aspartate
           Transcarbamoylase In Complex With Novel T State
           Inhibitors At 2.50 Resolution
 pdb|2H3E|A Chain A, Structure Of Wild-Type E. Coli Aspartate Transcarbamoylase
           In The Presence Of N-Phosphonacetyl-L-Isoasparagine At
           2.3a Resolution
 pdb|2H3E|C Chain C, Structure Of Wild-Type E. Coli Aspartate Transcarbamoylase
           In The Presence Of N-Phosphonacetyl-L-Isoasparagine At
           2.3a Resolution
 pdb|2IPO|A Chain A, E. Coli Aspartate Transcarbamoylase Complexed With N-
           Phosphonacetyl-l-asparagine
 pdb|2IPO|C Chain C, E. Coli Aspartate Transcarbamoylase Complexed With N-
           Phosphonacetyl-l-asparagine
 pdb|2QG9|A Chain A, Structure Of A Regulatory Subunit Mutant D19a Of Atcase
           From E. Coli
 pdb|2QG9|C Chain C, Structure Of A Regulatory Subunit Mutant D19a Of Atcase
           From E. Coli
 pdb|2QGF|A Chain A, Structure Of Regulatory Chain Mutant H20a Of Asparate
           Transcarbamoylase From E. Coli
 pdb|2QGF|C Chain C, Structure Of Regulatory Chain Mutant H20a Of Asparate
           Transcarbamoylase From E. Coli
 pdb|3D7S|A Chain A, Crystal Structure Of Wild-Type E. Coli Asparate
           Transcarbamoylase At Ph 8.5 At 2.80 A Resolution
 pdb|3D7S|C Chain C, Crystal Structure Of Wild-Type E. Coli Asparate
           Transcarbamoylase At Ph 8.5 At 2.80 A Resolution
 pdb|4F04|A Chain A, A Second Allosteric Site In E. Coli Aspartate
           Transcarbamoylase: R- State Atcase With Utp Bound
 pdb|4F04|C Chain C, A Second Allosteric Site In E. Coli Aspartate
           Transcarbamoylase: R- State Atcase With Utp Bound
 pdb|4FYV|A Chain A, Aspartate Transcarbamoylase Complexed With Dctp
 pdb|4FYV|C Chain C, Aspartate Transcarbamoylase Complexed With Dctp
 pdb|4FYW|A Chain A, E. Coli Aspartate Transcarbamoylase Complexed With Ctp
 pdb|4FYW|C Chain C, E. Coli Aspartate Transcarbamoylase Complexed With Ctp
 pdb|4FYX|A Chain A, E. Coli Aspartate Transcarbamoylase Complexed With Dctp,
           Utp, And Mg2+
 pdb|4FYX|C Chain C, E. Coli Aspartate Transcarbamoylase Complexed With Dctp,
           Utp, And Mg2+
 pdb|4FYY|A Chain A, E. Coli Aspartate Transcarbamoylase Complexed With Ctp,
           Utp, And Mg2+
 pdb|4FYY|C Chain C, E. Coli Aspartate Transcarbamoylase Complexed With Ctp,
           Utp, And Mg2+
          Length = 310

 Score = 66.6 bits (161), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 41/64 (64%)

Query: 9   YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLGR 68
           +++    +  AK+ M V+HPLPRV EIA + D  P A YF+QA  G++ R ALL +VL R
Sbjct: 247 FVLRASDLHNAKANMKVLHPLPRVDEIATDVDKTPHAWYFQQAGNGIFARQALLALVLNR 306

Query: 69  DSAL 72
           D  L
Sbjct: 307 DLVL 310



 Score = 66.6 bits (161), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 41/64 (64%)

Query: 85  YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLGR 144
           +++    +  AK+ M V+HPLPRV EIA + D  P A YF+QA  G++ R ALL +VL R
Sbjct: 247 FVLRASDLHNAKANMKVLHPLPRVDEIATDVDKTPHAWYFQQAGNGIFARQALLALVLNR 306

Query: 145 DSAL 148
           D  L
Sbjct: 307 DLVL 310


>pdb|1AT1|A Chain A, Crystal Structures Of Phosphonoacetamide Ligated T And
           Phosphonoacetamide And Malonate Ligated R States Of
           Aspartate Carbamoyltransferase At 2.8-Angstroms
           Resolution And Neutral PH
 pdb|1AT1|C Chain C, Crystal Structures Of Phosphonoacetamide Ligated T And
           Phosphonoacetamide And Malonate Ligated R States Of
           Aspartate Carbamoyltransferase At 2.8-Angstroms
           Resolution And Neutral PH
 pdb|2AT1|A Chain A, Crystal Structures Of Phosphonoacetamide Ligated T And
           Phosphonoacetamide And Malonate Ligated R States Of
           Aspartate Carbamoyltransferase At 2.8-Angstroms
           Resolution And Neutral Ph
 pdb|2AT1|C Chain C, Crystal Structures Of Phosphonoacetamide Ligated T And
           Phosphonoacetamide And Malonate Ligated R States Of
           Aspartate Carbamoyltransferase At 2.8-Angstroms
           Resolution And Neutral Ph
 pdb|3AT1|A Chain A, Crystal Structures Of Phosphonoacetamide Ligated T And
           Phosphonoacetamide And Malonate Ligated R States Of
           Aspartate Carbamoyltransferase At 2.8-Angstroms
           Resolution And Neutral Ph
 pdb|3AT1|C Chain C, Crystal Structures Of Phosphonoacetamide Ligated T And
           Phosphonoacetamide And Malonate Ligated R States Of
           Aspartate Carbamoyltransferase At 2.8-Angstroms
           Resolution And Neutral Ph
 pdb|4AT1|A Chain A, Structural Consequences Of Effector Binding To The T State
           Of Aspartate Carbamoyltransferase. Crystal Structures Of
           The Unligated And Atp-, And Ctp-Complexed Enzymes At
           2.6-Angstroms Resolution
 pdb|4AT1|C Chain C, Structural Consequences Of Effector Binding To The T State
           Of Aspartate Carbamoyltransferase. Crystal Structures Of
           The Unligated And Atp-, And Ctp-Complexed Enzymes At
           2.6-Angstroms Resolution
 pdb|5AT1|A Chain A, Structural Consequences Of Effector Binding To The T State
           Of Aspartate Carbamoyltransferase. Crystal Structures Of
           The Unligated And Atp-, And Ctp-Complexed Enzymes At
           2.6-Angstroms Resolution
 pdb|5AT1|C Chain C, Structural Consequences Of Effector Binding To The T State
           Of Aspartate Carbamoyltransferase. Crystal Structures Of
           The Unligated And Atp-, And Ctp-Complexed Enzymes At
           2.6-Angstroms Resolution
 pdb|6AT1|A Chain A, Structural Consequences Of Effector Binding To The T State
           Of Aspartate Carbamoyltransferase. Crystal Structures Of
           The Unligated And Atp-, And Ctp-Complexed Enzymes At
           2.6-Angstroms Resolution
 pdb|6AT1|C Chain C, Structural Consequences Of Effector Binding To The T State
           Of Aspartate Carbamoyltransferase. Crystal Structures Of
           The Unligated And Atp-, And Ctp-Complexed Enzymes At
           2.6-Angstroms Resolution
 pdb|7AT1|A Chain A, Crystal Structures Of Aspartate Carbamoyltransferase
           Ligated With Phosphonoacetamide, Malonate, And Ctp Or
           Atp At 2.8-angstroms Resolution And Neutral P*h
 pdb|7AT1|C Chain C, Crystal Structures Of Aspartate Carbamoyltransferase
           Ligated With Phosphonoacetamide, Malonate, And Ctp Or
           Atp At 2.8-angstroms Resolution And Neutral P*h
 pdb|8AT1|A Chain A, Crystal Structures Of Aspartate Carbamoyltransferase
           Ligated With Phosphonoacetamide, Malonate, And Ctp Or
           Atp At 2.8-Angstroms Resolution And Neutral PH
 pdb|8AT1|C Chain C, Crystal Structures Of Aspartate Carbamoyltransferase
           Ligated With Phosphonoacetamide, Malonate, And Ctp Or
           Atp At 2.8-Angstroms Resolution And Neutral PH
 pdb|8ATC|A Chain A, Complex Of N-Phosphonacetyl-L-Aspartate With Aspartate
           Carbamoyltransferase. X-Ray Refinement, Analysis Of
           Conformational Changes And Catalytic And Allosteric
           Mechanisms
 pdb|8ATC|C Chain C, Complex Of N-Phosphonacetyl-L-Aspartate With Aspartate
           Carbamoyltransferase. X-Ray Refinement, Analysis Of
           Conformational Changes And Catalytic And Allosteric
           Mechanisms
 pdb|1NBE|A Chain A, Aspartate Transcarbamoylase Regulatory Chain Mutant (T82a)
 pdb|1NBE|C Chain C, Aspartate Transcarbamoylase Regulatory Chain Mutant (T82a)
          Length = 310

 Score = 66.6 bits (161), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 41/64 (64%)

Query: 9   YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLGR 68
           +++    +  AK+ M V+HPLPRV EIA + D  P A YF+QA  G++ R ALL +VL R
Sbjct: 247 FVLRASDLHNAKANMKVLHPLPRVDEIATDVDKTPHAWYFQQAGNGIFARQALLALVLNR 306

Query: 69  DSAL 72
           D  L
Sbjct: 307 DLVL 310



 Score = 66.6 bits (161), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 41/64 (64%)

Query: 85  YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLGR 144
           +++    +  AK+ M V+HPLPRV EIA + D  P A YF+QA  G++ R ALL +VL R
Sbjct: 247 FVLRASDLHNAKANMKVLHPLPRVDEIATDVDKTPHAWYFQQAGNGIFARQALLALVLNR 306

Query: 145 DSAL 148
           D  L
Sbjct: 307 DLVL 310


>pdb|9ATC|A Chain A, Atcase Y165f Mutant
          Length = 310

 Score = 66.6 bits (161), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 41/64 (64%)

Query: 9   YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLGR 68
           +++    +  AK+ M V+HPLPRV EIA + D  P A YF+QA  G++ R ALL +VL R
Sbjct: 247 FVLRASDLHNAKANMKVLHPLPRVDEIATDVDKTPHAWYFQQAGNGIFARQALLALVLNR 306

Query: 69  DSAL 72
           D  L
Sbjct: 307 DLVL 310



 Score = 66.6 bits (161), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 41/64 (64%)

Query: 85  YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLGR 144
           +++    +  AK+ M V+HPLPRV EIA + D  P A YF+QA  G++ R ALL +VL R
Sbjct: 247 FVLRASDLHNAKANMKVLHPLPRVDEIATDVDKTPHAWYFQQAGNGIFARQALLALVLNR 306

Query: 145 DSAL 148
           D  L
Sbjct: 307 DLVL 310


>pdb|4E2F|I Chain I, Crystal Structure Of E. Coli Aspartate Transcarbamoylase
           K164eE239K Mutant In An Intermediate State
 pdb|4E2F|K Chain K, Crystal Structure Of E. Coli Aspartate Transcarbamoylase
           K164eE239K Mutant In An Intermediate State
 pdb|4E2F|G Chain G, Crystal Structure Of E. Coli Aspartate Transcarbamoylase
           K164eE239K Mutant In An Intermediate State
 pdb|4E2F|C Chain C, Crystal Structure Of E. Coli Aspartate Transcarbamoylase
           K164eE239K Mutant In An Intermediate State
 pdb|4E2F|A Chain A, Crystal Structure Of E. Coli Aspartate Transcarbamoylase
           K164eE239K Mutant In An Intermediate State
 pdb|4E2F|E Chain E, Crystal Structure Of E. Coli Aspartate Transcarbamoylase
           K164eE239K Mutant In An Intermediate State
          Length = 310

 Score = 66.6 bits (161), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 41/64 (64%)

Query: 9   YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLGR 68
           +++    +  AK+ M V+HPLPRV EIA + D  P A YF+QA  G++ R ALL +VL R
Sbjct: 247 FVLRASDLHNAKANMKVLHPLPRVDEIATDVDKTPHAWYFQQAGNGIFARQALLALVLNR 306

Query: 69  DSAL 72
           D  L
Sbjct: 307 DLVL 310



 Score = 66.6 bits (161), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 41/64 (64%)

Query: 85  YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLGR 144
           +++    +  AK+ M V+HPLPRV EIA + D  P A YF+QA  G++ R ALL +VL R
Sbjct: 247 FVLRASDLHNAKANMKVLHPLPRVDEIATDVDKTPHAWYFQQAGNGIFARQALLALVLNR 306

Query: 145 DSAL 148
           D  L
Sbjct: 307 DLVL 310


>pdb|1D09|A Chain A, Aspartate Transcarbamoylase Complexed With
           N-Phosphonacetyl-L- Aspartate (Pala)
 pdb|1D09|C Chain C, Aspartate Transcarbamoylase Complexed With
           N-Phosphonacetyl-L- Aspartate (Pala)
          Length = 310

 Score = 66.6 bits (161), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 41/64 (64%)

Query: 9   YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLGR 68
           +++    +  AK+ M V+HPLPRV EIA + D  P A YF+QA  G++ R ALL +VL R
Sbjct: 247 FVLRASDLHNAKANMKVLHPLPRVDEIATDVDKTPHAWYFQQAGNGIFARQALLALVLNR 306

Query: 69  DSAL 72
           D  L
Sbjct: 307 DLVL 310



 Score = 66.6 bits (161), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 41/64 (64%)

Query: 85  YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLGR 144
           +++    +  AK+ M V+HPLPRV EIA + D  P A YF+QA  G++ R ALL +VL R
Sbjct: 247 FVLRASDLHNAKANMKVLHPLPRVDEIATDVDKTPHAWYFQQAGNGIFARQALLALVLNR 306

Query: 145 DSAL 148
           D  L
Sbjct: 307 DLVL 310


>pdb|1TTH|A Chain A, Aspartate Transcarbamoylase Catalytic Chain Mutant
           Glu50ala Complexed With N-(Phosphonacetyl-L-Aspartate)
           (Pala)
 pdb|1TTH|C Chain C, Aspartate Transcarbamoylase Catalytic Chain Mutant
           Glu50ala Complexed With N-(Phosphonacetyl-L-Aspartate)
           (Pala)
 pdb|1TU0|A Chain A, Aspartate Transcarbamoylase Catalytic Chain Mutant E50a
           Complex With Phosphonoacetamide
 pdb|1TU0|C Chain C, Aspartate Transcarbamoylase Catalytic Chain Mutant E50a
           Complex With Phosphonoacetamide
 pdb|1TUG|A Chain A, Aspartate Transcarbamoylase Catalytic Chain Mutant E50a
           Complex With Phosphonoacetamide, Malonate, And
           Cytidine-5- Prime-Triphosphate (Ctp)
 pdb|1TUG|C Chain C, Aspartate Transcarbamoylase Catalytic Chain Mutant E50a
           Complex With Phosphonoacetamide, Malonate, And
           Cytidine-5- Prime-Triphosphate (Ctp)
          Length = 310

 Score = 66.6 bits (161), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 41/64 (64%)

Query: 9   YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLGR 68
           +++    +  AK+ M V+HPLPRV EIA + D  P A YF+QA  G++ R ALL +VL R
Sbjct: 247 FVLRASDLHNAKANMKVLHPLPRVDEIATDVDKTPHAWYFQQAGNGIFARQALLALVLNR 306

Query: 69  DSAL 72
           D  L
Sbjct: 307 DLVL 310



 Score = 66.6 bits (161), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 41/64 (64%)

Query: 85  YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLGR 144
           +++    +  AK+ M V+HPLPRV EIA + D  P A YF+QA  G++ R ALL +VL R
Sbjct: 247 FVLRASDLHNAKANMKVLHPLPRVDEIATDVDKTPHAWYFQQAGNGIFARQALLALVLNR 306

Query: 145 DSAL 148
           D  L
Sbjct: 307 DLVL 310


>pdb|2A0F|A Chain A, Structure Of D236a Mutant E. Coli Aspartate
           Transcarbamoylase In Presence Of Phosphonoacetamide At
           2.90 A Resolution
 pdb|2A0F|C Chain C, Structure Of D236a Mutant E. Coli Aspartate
           Transcarbamoylase In Presence Of Phosphonoacetamide At
           2.90 A Resolution
 pdb|2HSE|A Chain A, Structure Of D236a E. Coli Aspartate Transcarbamoylase In
           The Presence Of Phosphonoacetamide And L-Aspartate At
           2.60 A Resolution
 pdb|2HSE|C Chain C, Structure Of D236a E. Coli Aspartate Transcarbamoylase In
           The Presence Of Phosphonoacetamide And L-Aspartate At
           2.60 A Resolution
          Length = 310

 Score = 66.6 bits (161), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 41/64 (64%)

Query: 9   YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLGR 68
           +++    +  AK+ M V+HPLPRV EIA + D  P A YF+QA  G++ R ALL +VL R
Sbjct: 247 FVLRASDLHNAKANMKVLHPLPRVDEIATDVDKTPHAWYFQQAGNGIFARQALLALVLNR 306

Query: 69  DSAL 72
           D  L
Sbjct: 307 DLVL 310



 Score = 66.6 bits (161), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 41/64 (64%)

Query: 85  YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLGR 144
           +++    +  AK+ M V+HPLPRV EIA + D  P A YF+QA  G++ R ALL +VL R
Sbjct: 247 FVLRASDLHNAKANMKVLHPLPRVDEIATDVDKTPHAWYFQQAGNGIFARQALLALVLNR 306

Query: 145 DSAL 148
           D  L
Sbjct: 307 DLVL 310


>pdb|1ACM|A Chain A, Arginine 54 In The Active Site Of Escherichia Coli
           Aspartate Transcarbamoylase Is Critical For Catalysis: A
           Site-Specific Mutagenesis, Nmr And X-Ray Crystallography
           Study
 pdb|1ACM|C Chain C, Arginine 54 In The Active Site Of Escherichia Coli
           Aspartate Transcarbamoylase Is Critical For Catalysis: A
           Site-Specific Mutagenesis, Nmr And X-Ray Crystallography
           Study
          Length = 310

 Score = 66.6 bits (161), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 41/64 (64%)

Query: 9   YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLGR 68
           +++    +  AK+ M V+HPLPRV EIA + D  P A YF+QA  G++ R ALL +VL R
Sbjct: 247 FVLRASDLHNAKANMKVLHPLPRVDEIATDVDKTPHAWYFQQAGNGIFARQALLALVLNR 306

Query: 69  DSAL 72
           D  L
Sbjct: 307 DLVL 310



 Score = 66.6 bits (161), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 41/64 (64%)

Query: 85  YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLGR 144
           +++    +  AK+ M V+HPLPRV EIA + D  P A YF+QA  G++ R ALL +VL R
Sbjct: 247 FVLRASDLHNAKANMKVLHPLPRVDEIATDVDKTPHAWYFQQAGNGIFARQALLALVLNR 306

Query: 145 DSAL 148
           D  L
Sbjct: 307 DLVL 310


>pdb|1I5O|A Chain A, Crystal Structure Of Mutant R105a Of E. Coli Aspartate
           Transcarbamoylase
 pdb|1I5O|C Chain C, Crystal Structure Of Mutant R105a Of E. Coli Aspartate
           Transcarbamoylase
 pdb|1GQ3|A Chain A, Structure Of The R105a Mutant Catalytic Trimer Of
           Escherichia Coli Aspartate Transcarbamoylase At 2.0-A
           Resolution
 pdb|1GQ3|B Chain B, Structure Of The R105a Mutant Catalytic Trimer Of
           Escherichia Coli Aspartate Transcarbamoylase At 2.0-A
           Resolution
 pdb|1GQ3|C Chain C, Structure Of The R105a Mutant Catalytic Trimer Of
           Escherichia Coli Aspartate Transcarbamoylase At 2.0-A
           Resolution
          Length = 310

 Score = 66.6 bits (161), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 41/64 (64%)

Query: 9   YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLGR 68
           +++    +  AK+ M V+HPLPRV EIA + D  P A YF+QA  G++ R ALL +VL R
Sbjct: 247 FVLRASDLHNAKANMKVLHPLPRVDEIATDVDKTPHAWYFQQAGNGIFARQALLALVLNR 306

Query: 69  DSAL 72
           D  L
Sbjct: 307 DLVL 310



 Score = 66.6 bits (161), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 41/64 (64%)

Query: 85  YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLGR 144
           +++    +  AK+ M V+HPLPRV EIA + D  P A YF+QA  G++ R ALL +VL R
Sbjct: 247 FVLRASDLHNAKANMKVLHPLPRVDEIATDVDKTPHAWYFQQAGNGIFARQALLALVLNR 306

Query: 145 DSAL 148
           D  L
Sbjct: 307 DLVL 310


>pdb|1EKX|A Chain A, The Isolated, Unregulated Catalytic Trimer Of Aspartate
           Transcarbamoylase Complexed With Bisubstrate Analog Pala
           (N-(Phosphonacetyl)-L-Aspartate)
 pdb|1EKX|B Chain B, The Isolated, Unregulated Catalytic Trimer Of Aspartate
           Transcarbamoylase Complexed With Bisubstrate Analog Pala
           (N-(Phosphonacetyl)-L-Aspartate)
 pdb|1EKX|C Chain C, The Isolated, Unregulated Catalytic Trimer Of Aspartate
           Transcarbamoylase Complexed With Bisubstrate Analog Pala
           (N-(Phosphonacetyl)-L-Aspartate)
          Length = 311

 Score = 66.6 bits (161), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 41/64 (64%)

Query: 9   YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLGR 68
           +++    +  AK+ M V+HPLPRV EIA + D  P A YF+QA  G++ R ALL +VL R
Sbjct: 248 FVLRASDLHNAKANMKVLHPLPRVDEIATDVDKTPHAWYFQQAGNGIFARQALLALVLNR 307

Query: 69  DSAL 72
           D  L
Sbjct: 308 DLVL 311



 Score = 66.6 bits (161), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 41/64 (64%)

Query: 85  YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLGR 144
           +++    +  AK+ M V+HPLPRV EIA + D  P A YF+QA  G++ R ALL +VL R
Sbjct: 248 FVLRASDLHNAKANMKVLHPLPRVDEIATDVDKTPHAWYFQQAGNGIFARQALLALVLNR 307

Query: 145 DSAL 148
           D  L
Sbjct: 308 DLVL 311


>pdb|1XJW|A Chain A, The Structure Of E. Coli Aspartate Transcarbamoylase Q137a
           Mutant In The R-State
 pdb|1XJW|C Chain C, The Structure Of E. Coli Aspartate Transcarbamoylase Q137a
           Mutant In The R-State
          Length = 310

 Score = 66.6 bits (161), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 41/64 (64%)

Query: 9   YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLGR 68
           +++    +  AK+ M V+HPLPRV EIA + D  P A YF+QA  G++ R ALL +VL R
Sbjct: 247 FVLRASDLHNAKANMKVLHPLPRVDEIATDVDKTPHAWYFQQAGNGIFARQALLALVLNR 306

Query: 69  DSAL 72
           D  L
Sbjct: 307 DLVL 310



 Score = 66.6 bits (161), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 41/64 (64%)

Query: 85  YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLGR 144
           +++    +  AK+ M V+HPLPRV EIA + D  P A YF+QA  G++ R ALL +VL R
Sbjct: 247 FVLRASDLHNAKANMKVLHPLPRVDEIATDVDKTPHAWYFQQAGNGIFARQALLALVLNR 306

Query: 145 DSAL 148
           D  L
Sbjct: 307 DLVL 310


>pdb|1EZZ|A Chain A, Crystal Structure Of E. Coli Aspartate Transcarbamoylase
           P268a Mutant In The T-State
 pdb|1EZZ|C Chain C, Crystal Structure Of E. Coli Aspartate Transcarbamoylase
           P268a Mutant In The T-State
 pdb|1F1B|A Chain A, Crystal Structure Of E. Coli Aspartate Transcarbamoylase
           P268a Mutant In The R-state In The Presence Of
           N-phosphonacetyl-l-aspartate
 pdb|1F1B|C Chain C, Crystal Structure Of E. Coli Aspartate Transcarbamoylase
           P268a Mutant In The R-state In The Presence Of
           N-phosphonacetyl-l-aspartate
          Length = 310

 Score = 63.5 bits (153), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 29/64 (45%), Positives = 40/64 (62%)

Query: 9   YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLGR 68
           +++    +  AK+ M V+HPL RV EIA + D  P A YF+QA  G++ R ALL +VL R
Sbjct: 247 FVLRASDLHNAKANMKVLHPLARVDEIATDVDKTPHAWYFQQAGNGIFARQALLALVLNR 306

Query: 69  DSAL 72
           D  L
Sbjct: 307 DLVL 310



 Score = 63.5 bits (153), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 29/64 (45%), Positives = 40/64 (62%)

Query: 85  YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLGR 144
           +++    +  AK+ M V+HPL RV EIA + D  P A YF+QA  G++ R ALL +VL R
Sbjct: 247 FVLRASDLHNAKANMKVLHPLARVDEIATDVDKTPHAWYFQQAGNGIFARQALLALVLNR 306

Query: 145 DSAL 148
           D  L
Sbjct: 307 DLVL 310


>pdb|2BE7|A Chain A, Crystal Structure Of The Unliganded (T-State) Aspartate
           Transcarbamoylase Of The Psychrophilic Bacterium
           Moritella Profunda
 pdb|2BE7|B Chain B, Crystal Structure Of The Unliganded (T-State) Aspartate
           Transcarbamoylase Of The Psychrophilic Bacterium
           Moritella Profunda
 pdb|2BE7|C Chain C, Crystal Structure Of The Unliganded (T-State) Aspartate
           Transcarbamoylase Of The Psychrophilic Bacterium
           Moritella Profunda
          Length = 326

 Score = 62.8 bits (151), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 39/60 (65%)

Query: 9   YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLGR 68
           +I++   +  AK  + V+HPLPRV EIA + D  P A YF+QAE G+Y R ALL +VL  
Sbjct: 263 FILSASSLVHAKPNLKVLHPLPRVDEIATDVDKTPYAYYFQQAENGVYAREALLALVLNE 322



 Score = 62.8 bits (151), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 39/60 (65%)

Query: 85  YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLGR 144
           +I++   +  AK  + V+HPLPRV EIA + D  P A YF+QAE G+Y R ALL +VL  
Sbjct: 263 FILSASSLVHAKPNLKVLHPLPRVDEIATDVDKTPYAYYFQQAENGVYAREALLALVLNE 322


>pdb|2ATC|A Chain A, Crystal And Molecular Structures Of Native And
           Ctp-Liganded Aspartate Carbamoyltransferase From
           Escherichia Coli
          Length = 305

 Score = 62.0 bits (149), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 29/57 (50%), Positives = 36/57 (63%)

Query: 16  MTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLGRDSAL 72
           +  AK    V+HPLPRV EIA + D  P A YF+QA  G++ R ALL +VL RD  L
Sbjct: 249 LHNAKMNAKVLHPLPRVDEIATDVDKTPHAWYFQQAGNGIFARQALLALVLNRDLVL 305



 Score = 62.0 bits (149), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 29/57 (50%), Positives = 36/57 (63%)

Query: 92  MTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLGRDSAL 148
           +  AK    V+HPLPRV EIA + D  P A YF+QA  G++ R ALL +VL RD  L
Sbjct: 249 LHNAKMNAKVLHPLPRVDEIATDVDKTPHAWYFQQAGNGIFARQALLALVLNRDLVL 305


>pdb|1PG5|A Chain A, Crystal Structure Of The Unligated (t-state) Aspartate
           Transcarbamoylase From The Extremely Thermophilic
           Archaeon Sulfolobus Acidocaldarius
          Length = 299

 Score = 60.5 bits (145), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 29/66 (43%), Positives = 40/66 (60%)

Query: 79  KKSCGLYIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALL 138
           +K  G YIV+  +  K K    ++HPLPRV EI  + D   +A YF QA YG+ VRM++L
Sbjct: 234 EKIKGSYIVSLDLANKMKKDSIILHPLPRVNEIDRKVDKTTKAKYFEQASYGVPVRMSIL 293

Query: 139 TMVLGR 144
           T + G 
Sbjct: 294 TKIYGE 299



 Score = 60.1 bits (144), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 38/62 (61%)

Query: 7   GLYIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVL 66
           G YIV+  +  K K    ++HPLPRV EI  + D   +A YF QA YG+ VRM++LT + 
Sbjct: 238 GSYIVSLDLANKMKKDSIILHPLPRVNEIDRKVDKTTKAKYFEQASYGVPVRMSILTKIY 297

Query: 67  GR 68
           G 
Sbjct: 298 GE 299


>pdb|2BE9|A Chain A, Crystal Structure Of The Ctp-Liganded (T-State) Aspartate
           Transcarbamoylase From The Extremely Thermophilic
           Archaeon Sulfolobus Acidocaldarius
          Length = 300

 Score = 60.5 bits (145), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 29/66 (43%), Positives = 40/66 (60%)

Query: 79  KKSCGLYIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALL 138
           +K  G YIV+  +  K K    ++HPLPRV EI  + D   +A YF QA YG+ VRM++L
Sbjct: 235 EKIKGSYIVSLDLANKMKKDSIILHPLPRVNEIDRKVDKTTKAKYFEQASYGVPVRMSIL 294

Query: 139 TMVLGR 144
           T + G 
Sbjct: 295 TKIYGE 300



 Score = 60.1 bits (144), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 38/62 (61%)

Query: 7   GLYIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVL 66
           G YIV+  +  K K    ++HPLPRV EI  + D   +A YF QA YG+ VRM++LT + 
Sbjct: 239 GSYIVSLDLANKMKKDSIILHPLPRVNEIDRKVDKTTKAKYFEQASYGVPVRMSILTKIY 298

Query: 67  GR 68
           G 
Sbjct: 299 GE 300


>pdb|3LXM|A Chain A, 2.00 Angstrom Resolution Crystal Structure Of A Catalytic
           Subunit Of An Aspartate Carbamoyltransferase (Pyrb) From
           Yersinia Pestis Co92
 pdb|3LXM|B Chain B, 2.00 Angstrom Resolution Crystal Structure Of A Catalytic
           Subunit Of An Aspartate Carbamoyltransferase (Pyrb) From
           Yersinia Pestis Co92
 pdb|3LXM|C Chain C, 2.00 Angstrom Resolution Crystal Structure Of A Catalytic
           Subunit Of An Aspartate Carbamoyltransferase (Pyrb) From
           Yersinia Pestis Co92
          Length = 335

 Score = 59.3 bits (142), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 40/64 (62%)

Query: 9   YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLGR 68
           +I+    +T A+  + V+HPLPR+ EI  + D  P A YF+QA  G++ R ALL +VL  
Sbjct: 272 FILRSSDLTGARDNLKVLHPLPRIDEITTDVDKTPYAYYFQQAGNGIFARQALLALVLNA 331

Query: 69  DSAL 72
           + AL
Sbjct: 332 ELAL 335



 Score = 59.3 bits (142), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 40/64 (62%)

Query: 85  YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLGR 144
           +I+    +T A+  + V+HPLPR+ EI  + D  P A YF+QA  G++ R ALL +VL  
Sbjct: 272 FILRSSDLTGARDNLKVLHPLPRIDEITTDVDKTPYAYYFQQAGNGIFARQALLALVLNA 331

Query: 145 DSAL 148
           + AL
Sbjct: 332 ELAL 335


>pdb|2RGW|A Chain A, Catalytic Subunit Of M. Jannaschii Aspartate
           Transcarbamoylase
 pdb|2RGW|B Chain B, Catalytic Subunit Of M. Jannaschii Aspartate
           Transcarbamoylase
 pdb|2RGW|C Chain C, Catalytic Subunit Of M. Jannaschii Aspartate
           Transcarbamoylase
 pdb|2RGW|D Chain D, Catalytic Subunit Of M. Jannaschii Aspartate
           Transcarbamoylase
 pdb|2RGW|E Chain E, Catalytic Subunit Of M. Jannaschii Aspartate
           Transcarbamoylase
 pdb|2RGW|F Chain F, Catalytic Subunit Of M. Jannaschii Aspartate
           Transcarbamoylase
 pdb|3E2P|A Chain A, Catalytic Subunit Of M. Jannaschii Aspartate
           Transcarbamoylase In An Orthorhombic Crystal Form
 pdb|3E2P|B Chain B, Catalytic Subunit Of M. Jannaschii Aspartate
           Transcarbamoylase In An Orthorhombic Crystal Form
 pdb|3E2P|C Chain C, Catalytic Subunit Of M. Jannaschii Aspartate
           Transcarbamoylase In An Orthorhombic Crystal Form
 pdb|3E2P|D Chain D, Catalytic Subunit Of M. Jannaschii Aspartate
           Transcarbamoylase In An Orthorhombic Crystal Form
 pdb|3E2P|E Chain E, Catalytic Subunit Of M. Jannaschii Aspartate
           Transcarbamoylase In An Orthorhombic Crystal Form
 pdb|3E2P|F Chain F, Catalytic Subunit Of M. Jannaschii Aspartate
           Transcarbamoylase In An Orthorhombic Crystal Form
 pdb|3E2P|I Chain I, Catalytic Subunit Of M. Jannaschii Aspartate
           Transcarbamoylase In An Orthorhombic Crystal Form
 pdb|3E2P|J Chain J, Catalytic Subunit Of M. Jannaschii Aspartate
           Transcarbamoylase In An Orthorhombic Crystal Form
 pdb|3E2P|K Chain K, Catalytic Subunit Of M. Jannaschii Aspartate
           Transcarbamoylase In An Orthorhombic Crystal Form
 pdb|3E2P|L Chain L, Catalytic Subunit Of M. Jannaschii Aspartate
           Transcarbamoylase In An Orthorhombic Crystal Form
 pdb|3E2P|M Chain M, Catalytic Subunit Of M. Jannaschii Aspartate
           Transcarbamoylase In An Orthorhombic Crystal Form
 pdb|3E2P|N Chain N, Catalytic Subunit Of M. Jannaschii Aspartate
           Transcarbamoylase In An Orthorhombic Crystal Form
 pdb|4EKN|B Chain B, Structure Of The Catalytic Chain Of Methanococcus
           Jannaschii Aspartate Transcarbamoylase In A Hexagonal
           Crystal Form
          Length = 306

 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 23/45 (51%), Positives = 32/45 (71%)

Query: 22  KMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVL 66
           K  +MHPLPRV EI  + D  P+A YF+Q+ YG+ VRMA+L  ++
Sbjct: 256 KFIIMHPLPRVDEIDYDVDDLPQAKYFKQSFYGIPVRMAILKKLI 300



 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 23/45 (51%), Positives = 32/45 (71%)

Query: 98  KMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVL 142
           K  +MHPLPRV EI  + D  P+A YF+Q+ YG+ VRMA+L  ++
Sbjct: 256 KFIIMHPLPRVDEIDYDVDDLPQAKYFKQSFYGIPVRMAILKKLI 300


>pdb|2AT2|A Chain A, Molecular Structure Of Bacillus Subtilis Aspartate
           Transcarbamoylase At 3.0 Angstroms Resolution
 pdb|2AT2|B Chain B, Molecular Structure Of Bacillus Subtilis Aspartate
           Transcarbamoylase At 3.0 Angstroms Resolution
 pdb|2AT2|C Chain C, Molecular Structure Of Bacillus Subtilis Aspartate
           Transcarbamoylase At 3.0 Angstroms Resolution
          Length = 300

 Score = 32.0 bits (71), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 2/60 (3%)

Query: 9   YIVTPKIMTKAKSKMAVMHPLP--RVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVL 66
           Y +T +   + K    +MHP P  R  EI        ++  F+Q + G+++RMA++   L
Sbjct: 230 YGLTVERAERMKRHAIIMHPAPVNRGVEIDDSLVESEKSRIFKQMKNGVFIRMAVIQCAL 289



 Score = 32.0 bits (71), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 2/60 (3%)

Query: 85  YIVTPKIMTKAKSKMAVMHPLP--RVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVL 142
           Y +T +   + K    +MHP P  R  EI        ++  F+Q + G+++RMA++   L
Sbjct: 230 YGLTVERAERMKRHAIIMHPAPVNRGVEIDDSLVESEKSRIFKQMKNGVFIRMAVIQCAL 289


>pdb|3R7D|A Chain A, Crystal Structure Of Unliganded Aspartate
           Transcarbamoylase From Bacillus Subtilis
 pdb|3R7D|B Chain B, Crystal Structure Of Unliganded Aspartate
           Transcarbamoylase From Bacillus Subtilis
 pdb|3R7D|C Chain C, Crystal Structure Of Unliganded Aspartate
           Transcarbamoylase From Bacillus Subtilis
 pdb|3R7F|A Chain A, Crystal Structure Of Cp-Bound Aspartate Transcarbamoylase
           From Bacillus Subtilis
 pdb|3R7F|B Chain B, Crystal Structure Of Cp-Bound Aspartate Transcarbamoylase
           From Bacillus Subtilis
 pdb|3R7F|C Chain C, Crystal Structure Of Cp-Bound Aspartate Transcarbamoylase
           From Bacillus Subtilis
 pdb|3R7L|A Chain A, Crystal Structure Of Pala-Bound Aspartate
           Transcarbamoylase From Bacillus Subtilis
 pdb|3R7L|B Chain B, Crystal Structure Of Pala-Bound Aspartate
           Transcarbamoylase From Bacillus Subtilis
 pdb|3R7L|C Chain C, Crystal Structure Of Pala-Bound Aspartate
           Transcarbamoylase From Bacillus Subtilis
 pdb|3R7L|D Chain D, Crystal Structure Of Pala-Bound Aspartate
           Transcarbamoylase From Bacillus Subtilis
 pdb|3R7L|E Chain E, Crystal Structure Of Pala-Bound Aspartate
           Transcarbamoylase From Bacillus Subtilis
 pdb|3R7L|F Chain F, Crystal Structure Of Pala-Bound Aspartate
           Transcarbamoylase From Bacillus Subtilis
          Length = 304

 Score = 32.0 bits (71), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 2/60 (3%)

Query: 9   YIVTPKIMTKAKSKMAVMHPLP--RVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVL 66
           Y +T +   + K    +MHP P  R  EI        ++  F+Q + G+++RMA++   L
Sbjct: 230 YGLTVERAERMKRHAIIMHPAPVNRGVEIDDSLVESEKSRIFKQMKNGVFIRMAVIQRAL 289



 Score = 32.0 bits (71), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 2/60 (3%)

Query: 85  YIVTPKIMTKAKSKMAVMHPLP--RVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVL 142
           Y +T +   + K    +MHP P  R  EI        ++  F+Q + G+++RMA++   L
Sbjct: 230 YGLTVERAERMKRHAIIMHPAPVNRGVEIDDSLVESEKSRIFKQMKNGVFIRMAVIQRAL 289


>pdb|2I6U|A Chain A, Crystal Structure Of Ornithine Carbamoyltransferase
           Complexed With Carbamoyl Phosphate And L-Norvaline From
           Mycobacterium Tuberculosis (Rv1656) At 2.2 A
 pdb|2I6U|B Chain B, Crystal Structure Of Ornithine Carbamoyltransferase
           Complexed With Carbamoyl Phosphate And L-Norvaline From
           Mycobacterium Tuberculosis (Rv1656) At 2.2 A
 pdb|2I6U|C Chain C, Crystal Structure Of Ornithine Carbamoyltransferase
           Complexed With Carbamoyl Phosphate And L-Norvaline From
           Mycobacterium Tuberculosis (Rv1656) At 2.2 A
 pdb|2P2G|A Chain A, Crystal Structure Of Ornithine Carbamoyltransferase From
           Mycobacterium Tuberculosis (rv1656): Orthorhombic Form
 pdb|2P2G|B Chain B, Crystal Structure Of Ornithine Carbamoyltransferase From
           Mycobacterium Tuberculosis (rv1656): Orthorhombic Form
 pdb|2P2G|C Chain C, Crystal Structure Of Ornithine Carbamoyltransferase From
           Mycobacterium Tuberculosis (rv1656): Orthorhombic Form
 pdb|2P2G|D Chain D, Crystal Structure Of Ornithine Carbamoyltransferase From
           Mycobacterium Tuberculosis (rv1656): Orthorhombic Form
 pdb|2P2G|E Chain E, Crystal Structure Of Ornithine Carbamoyltransferase From
           Mycobacterium Tuberculosis (rv1656): Orthorhombic Form
 pdb|2P2G|F Chain F, Crystal Structure Of Ornithine Carbamoyltransferase From
           Mycobacterium Tuberculosis (rv1656): Orthorhombic Form
          Length = 307

 Score = 31.6 bits (70), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 10/82 (12%)

Query: 73  TYSNTPKKSCGLYIVTP--------KIMTKAKSKMAVMHPLP--RVFEIAPEFDSDPRAA 122
           T+++  +++ GL  V P        +++  A S   V+H LP  R  EI       P +A
Sbjct: 225 TWTSMGQENDGLDRVKPFRPFQLNSRLLALADSDAIVLHCLPAHRGDEITDAVMDGPASA 284

Query: 123 YFRQAEYGMYVRMALLTMVLGR 144
            + +AE  ++ + ALL  +L R
Sbjct: 285 VWDEAENRLHAQKALLVWLLER 306



 Score = 29.6 bits (65), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 2/62 (3%)

Query: 9   YIVTPKIMTKAKSKMAVMHPLP--RVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVL 66
           + +  +++  A S   V+H LP  R  EI       P +A + +AE  ++ + ALL  +L
Sbjct: 245 FQLNSRLLALADSDAIVLHCLPAHRGDEITDAVMDGPASAVWDEAENRLHAQKALLVWLL 304

Query: 67  GR 68
            R
Sbjct: 305 ER 306


>pdb|2O6I|A Chain A, Structure Of An Enterococcus Faecalis Hd Domain
           Phosphohydrolase
 pdb|2O6I|B Chain B, Structure Of An Enterococcus Faecalis Hd Domain
           Phosphohydrolase
 pdb|3IRH|A Chain A, Structure Of An Enterococcus Faecalis Hd-Domain Protein
           Complexed With Dgtp And Datp
 pdb|3IRH|B Chain B, Structure Of An Enterococcus Faecalis Hd-Domain Protein
           Complexed With Dgtp And Datp
 pdb|3IRH|C Chain C, Structure Of An Enterococcus Faecalis Hd-Domain Protein
           Complexed With Dgtp And Datp
 pdb|3IRH|D Chain D, Structure Of An Enterococcus Faecalis Hd-Domain Protein
           Complexed With Dgtp And Datp
          Length = 480

 Score = 31.6 bits (70), Expect = 0.21,   Method: Composition-based stats.
 Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 26/133 (19%)

Query: 11  VTPKIMTKAKSKMAVMHPLPRVFE-IAPEFDSDP-----RAAYFRQAEYGMYVRMALLTM 64
           V+     K  S +   +P P+V + I+ + D+D      R AYF   EYG +    +L +
Sbjct: 175 VSADFPEKVASVITKQYPNPQVVQMISSQIDADRMDYLLRDAYFTGTEYGTFDLTRILRV 234

Query: 65  VLGRDSALTYSNTPKKSCGLYIVTPKIMTKAKSKMAV-MHPLPRVFEIA----------- 112
           +      + ++       G++ V   I+++ +  + V  HP+ R  E+            
Sbjct: 235 IRPYKGGIAFAMN-----GMHAVEDYIVSRYQMYVQVYFHPVSRGMEVILDHLLHRAKEL 289

Query: 113 ---PEFDSDPRAA 122
              PEFD D +A+
Sbjct: 290 FENPEFDYDLQAS 302


>pdb|1PVV|A Chain A, Refined Structure Of Pyrococcus Furiosus Ornithine
           Carbamoyltransferase At 1.87 A
          Length = 315

 Score = 30.0 bits (66), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 2/61 (3%)

Query: 9   YIVTPKIMTKAKSKMAVMHPLP--RVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVL 66
           + V   ++  AK     MH LP  R  E+  +    P +  + QAE  ++ + A+L +V+
Sbjct: 251 FQVNKDLVKHAKPDYMFMHCLPAHRGEEVTDDVIDSPNSVVWDQAENRLHAQKAVLALVM 310

Query: 67  G 67
           G
Sbjct: 311 G 311



 Score = 30.0 bits (66), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 2/61 (3%)

Query: 85  YIVTPKIMTKAKSKMAVMHPLP--RVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVL 142
           + V   ++  AK     MH LP  R  E+  +    P +  + QAE  ++ + A+L +V+
Sbjct: 251 FQVNKDLVKHAKPDYMFMHCLPAHRGEEVTDDVIDSPNSVVWDQAENRLHAQKAVLALVM 310

Query: 143 G 143
           G
Sbjct: 311 G 311


>pdb|1A1S|A Chain A, Ornithine Carbamoyltransferase From Pyrococcus Furiosus
          Length = 314

 Score = 30.0 bits (66), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 2/61 (3%)

Query: 9   YIVTPKIMTKAKSKMAVMHPLP--RVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVL 66
           + V   ++  AK     MH LP  R  E+  +    P +  + QAE  ++ + A+L +V+
Sbjct: 250 FQVNKDLVKHAKPDYMFMHCLPAHRGEEVTDDVIDSPNSVVWDQAENRLHAQKAVLALVM 309

Query: 67  G 67
           G
Sbjct: 310 G 310



 Score = 30.0 bits (66), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 2/61 (3%)

Query: 85  YIVTPKIMTKAKSKMAVMHPLP--RVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVL 142
           + V   ++  AK     MH LP  R  E+  +    P +  + QAE  ++ + A+L +V+
Sbjct: 250 FQVNKDLVKHAKPDYMFMHCLPAHRGEEVTDDVIDSPNSVVWDQAENRLHAQKAVLALVM 309

Query: 143 G 143
           G
Sbjct: 310 G 310


>pdb|4EP1|A Chain A, Crystal Structure Of Anabolic Ornithine
           Carbamoyltransferase From Bacillus Anthracis
 pdb|4EP1|B Chain B, Crystal Structure Of Anabolic Ornithine
           Carbamoyltransferase From Bacillus Anthracis
          Length = 340

 Score = 28.9 bits (63), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 2/56 (3%)

Query: 9   YIVTPKIMTKAKSKMAVMHPLP--RVFEIAPEFDSDPRAAYFRQAEYGMYVRMALL 62
           Y +  +++  AK     +H LP  R  E+  E    P++  F QA   ++ + ALL
Sbjct: 274 YQINKELVKHAKQTYHFLHCLPAHREEEVTGEIIDGPQSIVFEQAGNRLHAQKALL 329



 Score = 28.9 bits (63), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 2/56 (3%)

Query: 85  YIVTPKIMTKAKSKMAVMHPLP--RVFEIAPEFDSDPRAAYFRQAEYGMYVRMALL 138
           Y +  +++  AK     +H LP  R  E+  E    P++  F QA   ++ + ALL
Sbjct: 274 YQINKELVKHAKQTYHFLHCLPAHREEEVTGEIIDGPQSIVFEQAGNRLHAQKALL 329


>pdb|3GD5|A Chain A, Crystal Structure Of Ornithine Carbamoyltransferase From
           Gloeobacter Violaceus
 pdb|3GD5|B Chain B, Crystal Structure Of Ornithine Carbamoyltransferase From
           Gloeobacter Violaceus
 pdb|3GD5|C Chain C, Crystal Structure Of Ornithine Carbamoyltransferase From
           Gloeobacter Violaceus
 pdb|3GD5|D Chain D, Crystal Structure Of Ornithine Carbamoyltransferase From
           Gloeobacter Violaceus
 pdb|3GD5|E Chain E, Crystal Structure Of Ornithine Carbamoyltransferase From
           Gloeobacter Violaceus
 pdb|3GD5|F Chain F, Crystal Structure Of Ornithine Carbamoyltransferase From
           Gloeobacter Violaceus
          Length = 323

 Score = 26.9 bits (58), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 2/45 (4%)

Query: 25  VMHPLP--RVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLG 67
           V+H LP  R  EI  E    PR+  + +AE  ++ + A+L  ++G
Sbjct: 269 VLHCLPAHRGEEITDEVMEGPRSRIWDEAENRLHAQKAVLAALMG 313



 Score = 26.9 bits (58), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 2/45 (4%)

Query: 101 VMHPLP--RVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLG 143
           V+H LP  R  EI  E    PR+  + +AE  ++ + A+L  ++G
Sbjct: 269 VLHCLPAHRGEEITDEVMEGPRSRIWDEAENRLHAQKAVLAALMG 313


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.323    0.134    0.393 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,197,262
Number of Sequences: 62578
Number of extensions: 143678
Number of successful extensions: 237
Number of sequences better than 100.0: 30
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 187
Number of HSP's gapped (non-prelim): 59
length of query: 157
length of database: 14,973,337
effective HSP length: 91
effective length of query: 66
effective length of database: 9,278,739
effective search space: 612396774
effective search space used: 612396774
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 47 (22.7 bits)