BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4400
(157 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q91437|PYR1_SQUAC CAD protein OS=Squalus acanthias GN=CAD PE=2 SV=1
Length = 2242
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 47/66 (71%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 80 KSC-GLYIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALL 138
++C G +I+TP IMTK K KM VMHPLPRV E++ E DSDPRAAYFRQAE GMYVRMALL
Sbjct: 2176 EACFGQFILTPHIMTKGKKKMVVMHPLPRVNEVSVEVDSDPRAAYFRQAENGMYVRMALL 2235
Query: 139 TMVLGR 144
VLG+
Sbjct: 2236 ATVLGK 2241
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 46/62 (74%), Positives = 51/62 (82%)
Query: 7 GLYIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVL 66
G +I+TP IMTK K KM VMHPLPRV E++ E DSDPRAAYFRQAE GMYVRMALL VL
Sbjct: 2180 GQFILTPHIMTKGKKKMVVMHPLPRVNEVSVEVDSDPRAAYFRQAENGMYVRMALLATVL 2239
Query: 67 GR 68
G+
Sbjct: 2240 GK 2241
>sp|P08955|PYR1_MESAU CAD protein OS=Mesocricetus auratus GN=CAD PE=1 SV=4
Length = 2225
Score = 100 bits (248), Expect = 5e-21, Method: Composition-based stats.
Identities = 46/62 (74%), Positives = 52/62 (83%)
Query: 7 GLYIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVL 66
G +I+TP IMT+AK KM VMHP+PRV EI+ E DSDPRAAYFRQAE GMY+RMALL VL
Sbjct: 2163 GQFILTPHIMTRAKKKMVVMHPMPRVNEISVEVDSDPRAAYFRQAENGMYIRMALLATVL 2222
Query: 67 GR 68
GR
Sbjct: 2223 GR 2224
Score = 100 bits (248), Expect = 5e-21, Method: Composition-based stats.
Identities = 46/62 (74%), Positives = 52/62 (83%)
Query: 83 GLYIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVL 142
G +I+TP IMT+AK KM VMHP+PRV EI+ E DSDPRAAYFRQAE GMY+RMALL VL
Sbjct: 2163 GQFILTPHIMTRAKKKMVVMHPMPRVNEISVEVDSDPRAAYFRQAENGMYIRMALLATVL 2222
Query: 143 GR 144
GR
Sbjct: 2223 GR 2224
>sp|P27708|PYR1_HUMAN CAD protein OS=Homo sapiens GN=CAD PE=1 SV=3
Length = 2225
Score = 99.4 bits (246), Expect = 7e-21, Method: Composition-based stats.
Identities = 46/62 (74%), Positives = 52/62 (83%)
Query: 7 GLYIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVL 66
G +I+TP IMT+AK KM VMHP+PRV EI+ E DSDPRAAYFRQAE GMY+RMALL VL
Sbjct: 2163 GQFILTPHIMTRAKKKMVVMHPMPRVNEISVEVDSDPRAAYFRQAENGMYIRMALLATVL 2222
Query: 67 GR 68
GR
Sbjct: 2223 GR 2224
Score = 99.4 bits (246), Expect = 7e-21, Method: Composition-based stats.
Identities = 46/62 (74%), Positives = 52/62 (83%)
Query: 83 GLYIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVL 142
G +I+TP IMT+AK KM VMHP+PRV EI+ E DSDPRAAYFRQAE GMY+RMALL VL
Sbjct: 2163 GQFILTPHIMTRAKKKMVVMHPMPRVNEISVEVDSDPRAAYFRQAENGMYIRMALLATVL 2222
Query: 143 GR 144
GR
Sbjct: 2223 GR 2224
>sp|P05990|PYR1_DROME CAD protein OS=Drosophila melanogaster GN=r PE=1 SV=3
Length = 2224
Score = 98.2 bits (243), Expect = 2e-20, Method: Composition-based stats.
Identities = 45/71 (63%), Positives = 58/71 (81%), Gaps = 1/71 (1%)
Query: 79 KKSCGLYIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALL 138
+K CG ++TP+ M +AK + V+HPLPR+ EI+ E DSDPRAAYFRQAEYGMY+RMALL
Sbjct: 2154 EKCCGHLVLTPEHMMRAKKRSIVLHPLPRLNEISREIDSDPRAAYFRQAEYGMYIRMALL 2213
Query: 139 TMVL-GRDSAL 148
MV+ GR++AL
Sbjct: 2214 AMVVGGRNTAL 2224
Score = 96.7 bits (239), Expect = 6e-20, Method: Composition-based stats.
Identities = 44/68 (64%), Positives = 56/68 (82%), Gaps = 1/68 (1%)
Query: 6 CGLYIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMV 65
CG ++TP+ M +AK + V+HPLPR+ EI+ E DSDPRAAYFRQAEYGMY+RMALL MV
Sbjct: 2157 CGHLVLTPEHMMRAKKRSIVLHPLPRLNEISREIDSDPRAAYFRQAEYGMYIRMALLAMV 2216
Query: 66 L-GRDSAL 72
+ GR++AL
Sbjct: 2217 VGGRNTAL 2224
>sp|P20054|PYR1_DICDI Protein PYR1-3 OS=Dictyostelium discoideum GN=pyr1-3 PE=1 SV=3
Length = 2225
Score = 92.8 bits (229), Expect = 8e-19, Method: Composition-based stats.
Identities = 39/59 (66%), Positives = 47/59 (79%)
Query: 9 YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLG 67
+I+TP +TKA M VMHPLPR+ EI+PE DSDPRAAYFRQ E G+YVRM+LL +V G
Sbjct: 2164 FIITPHTLTKASDNMIVMHPLPRINEISPEVDSDPRAAYFRQMENGLYVRMSLLALVFG 2222
Score = 92.8 bits (229), Expect = 8e-19, Method: Composition-based stats.
Identities = 39/59 (66%), Positives = 47/59 (79%)
Query: 85 YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLG 143
+I+TP +TKA M VMHPLPR+ EI+PE DSDPRAAYFRQ E G+YVRM+LL +V G
Sbjct: 2164 FIITPHTLTKASDNMIVMHPLPRINEISPEVDSDPRAAYFRQMENGLYVRMSLLALVFG 2222
>sp|P07259|PYR1_YEAST Protein URA2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=URA2 PE=1 SV=5
Length = 2214
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 52/73 (71%), Gaps = 3/73 (4%)
Query: 76 NTPKKSCGL---YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMY 132
N+P++ L YIV KI+ AK MA+MHPLPRV EI E D D RAAYFRQ +YG++
Sbjct: 2141 NSPEEYARLKDTYIVDNKILAHAKENMAIMHPLPRVNEIKEEVDYDHRAAYFRQMKYGLF 2200
Query: 133 VRMALLTMVLGRD 145
VRMALL MV+G D
Sbjct: 2201 VRMALLAMVMGVD 2213
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 40/61 (65%), Positives = 46/61 (75%)
Query: 9 YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLGR 68
YIV KI+ AK MA+MHPLPRV EI E D D RAAYFRQ +YG++VRMALL MV+G
Sbjct: 2153 YIVDNKILAHAKENMAIMHPLPRVNEIKEEVDYDHRAAYFRQMKYGLFVRMALLAMVMGV 2212
Query: 69 D 69
D
Sbjct: 2213 D 2213
>sp|B2TNG3|PYRB_CLOBB Aspartate carbamoyltransferase OS=Clostridium botulinum (strain
Eklund 17B / Type B) GN=pyrB PE=3 SV=1
Length = 307
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/59 (66%), Positives = 44/59 (74%)
Query: 9 YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLG 67
YI+ + M AKS M VMHPLPRV EIA E D D RAAYF+QAEYGMY RMAL+ +LG
Sbjct: 247 YILNKEKMNLAKSDMIVMHPLPRVNEIACEVDYDKRAAYFKQAEYGMYARMALMAKLLG 305
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/59 (66%), Positives = 44/59 (74%)
Query: 85 YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLG 143
YI+ + M AKS M VMHPLPRV EIA E D D RAAYF+QAEYGMY RMAL+ +LG
Sbjct: 247 YILNKEKMNLAKSDMIVMHPLPRVNEIACEVDYDKRAAYFKQAEYGMYARMALMAKLLG 305
>sp|B2UW93|PYRB_CLOBA Aspartate carbamoyltransferase OS=Clostridium botulinum (strain
Alaska E43 / Type E3) GN=pyrB PE=3 SV=1
Length = 307
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 38/59 (64%), Positives = 43/59 (72%)
Query: 9 YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLG 67
YI+ + M AK M VMHPLPRV EIA E D D RAAYF+QAEYGMY RMAL+ +LG
Sbjct: 247 YILNKEKMNLAKDDMIVMHPLPRVNEIACEVDYDKRAAYFKQAEYGMYARMALMAKLLG 305
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 38/59 (64%), Positives = 43/59 (72%)
Query: 85 YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLG 143
YI+ + M AK M VMHPLPRV EIA E D D RAAYF+QAEYGMY RMAL+ +LG
Sbjct: 247 YILNKEKMNLAKDDMIVMHPLPRVNEIACEVDYDKRAAYFKQAEYGMYARMALMAKLLG 305
>sp|A6LS54|PYRB_CLOB8 Aspartate carbamoyltransferase OS=Clostridium beijerinckii (strain
ATCC 51743 / NCIMB 8052) GN=pyrB PE=3 SV=1
Length = 308
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/59 (64%), Positives = 43/59 (72%)
Query: 9 YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLG 67
YI+ M AK M VMHPLPRV EIA E D D RA+YF+QAEYGMYVRMAL+ +LG
Sbjct: 248 YILDRAKMDLAKDDMIVMHPLPRVNEIAYEVDEDRRASYFKQAEYGMYVRMALMIKLLG 306
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/59 (64%), Positives = 43/59 (72%)
Query: 85 YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLG 143
YI+ M AK M VMHPLPRV EIA E D D RA+YF+QAEYGMYVRMAL+ +LG
Sbjct: 248 YILDRAKMDLAKDDMIVMHPLPRVNEIAYEVDEDRRASYFKQAEYGMYVRMALMIKLLG 306
>sp|C1FLB6|PYRB_CLOBJ Aspartate carbamoyltransferase OS=Clostridium botulinum (strain
Kyoto / Type A2) GN=pyrB PE=3 SV=1
Length = 307
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 43/59 (72%)
Query: 9 YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLG 67
YI+ + M AK M V+HPLPRV EIA E D DPR YF+QA+YGMYVRMAL+ +LG
Sbjct: 247 YILDGEKMKYAKKDMMVLHPLPRVNEIAYEIDQDPRGCYFKQAKYGMYVRMALIAKLLG 305
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 43/59 (72%)
Query: 85 YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLG 143
YI+ + M AK M V+HPLPRV EIA E D DPR YF+QA+YGMYVRMAL+ +LG
Sbjct: 247 YILDGEKMKYAKKDMMVLHPLPRVNEIAYEIDQDPRGCYFKQAKYGMYVRMALIAKLLG 305
>sp|A5I6X1|PYRB_CLOBH Aspartate carbamoyltransferase OS=Clostridium botulinum (strain
Hall / ATCC 3502 / NCTC 13319 / Type A) GN=pyrB PE=3
SV=1
Length = 307
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 43/59 (72%)
Query: 9 YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLG 67
YI+ + M AK M V+HPLPRV EIA E D DPR YF+QA+YGMYVRMAL+ +LG
Sbjct: 247 YILDGEKMKYAKKDMMVLHPLPRVNEIAYEIDQDPRGCYFKQAKYGMYVRMALIAKLLG 305
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 43/59 (72%)
Query: 85 YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLG 143
YI+ + M AK M V+HPLPRV EIA E D DPR YF+QA+YGMYVRMAL+ +LG
Sbjct: 247 YILDGEKMKYAKKDMMVLHPLPRVNEIAYEIDQDPRGCYFKQAKYGMYVRMALIAKLLG 305
>sp|A7FYJ2|PYRB_CLOB1 Aspartate carbamoyltransferase OS=Clostridium botulinum (strain
ATCC 19397 / Type A) GN=pyrB PE=3 SV=1
Length = 307
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 43/59 (72%)
Query: 9 YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLG 67
YI+ + M AK M V+HPLPRV EIA E D DPR YF+QA+YGMYVRMAL+ +LG
Sbjct: 247 YILDGEKMKYAKKDMMVLHPLPRVNEIAYEIDQDPRGCYFKQAKYGMYVRMALIAKLLG 305
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 43/59 (72%)
Query: 85 YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLG 143
YI+ + M AK M V+HPLPRV EIA E D DPR YF+QA+YGMYVRMAL+ +LG
Sbjct: 247 YILDGEKMKYAKKDMMVLHPLPRVNEIAYEIDQDPRGCYFKQAKYGMYVRMALIAKLLG 305
>sp|C3KU87|PYRB_CLOB6 Aspartate carbamoyltransferase OS=Clostridium botulinum (strain 657
/ Type Ba4) GN=pyrB PE=3 SV=1
Length = 307
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 43/59 (72%)
Query: 9 YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLG 67
YI+ + M AK M V+HPLPRV EIA E D DPR YF+QA+YGMYVRMAL+ +LG
Sbjct: 247 YILDGEKMKYAKKDMMVLHPLPRVNEIAYEIDQDPRGCYFKQAKYGMYVRMALIAKLLG 305
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 43/59 (72%)
Query: 85 YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLG 143
YI+ + M AK M V+HPLPRV EIA E D DPR YF+QA+YGMYVRMAL+ +LG
Sbjct: 247 YILDGEKMKYAKKDMMVLHPLPRVNEIAYEIDQDPRGCYFKQAKYGMYVRMALIAKLLG 305
>sp|A7GII2|PYRB_CLOBL Aspartate carbamoyltransferase OS=Clostridium botulinum (strain
Langeland / NCTC 10281 / Type F) GN=pyrB PE=3 SV=1
Length = 307
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 43/59 (72%)
Query: 9 YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLG 67
YI+ + M AK M V+HPLPRV EIA E D DPR YF+QA+YGMYVRMAL+ +LG
Sbjct: 247 YILDGEKMKYAKKDMMVLHPLPRVNEIAYEIDQDPRGCYFKQAKYGMYVRMALIAKLLG 305
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 43/59 (72%)
Query: 85 YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLG 143
YI+ + M AK M V+HPLPRV EIA E D DPR YF+QA+YGMYVRMAL+ +LG
Sbjct: 247 YILDGEKMKYAKKDMMVLHPLPRVNEIAYEIDQDPRGCYFKQAKYGMYVRMALIAKLLG 305
>sp|B1L1E7|PYRB_CLOBM Aspartate carbamoyltransferase OS=Clostridium botulinum (strain
Loch Maree / Type A3) GN=pyrB PE=3 SV=1
Length = 307
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 43/59 (72%)
Query: 9 YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLG 67
YI+ + M AK M V+HPLPRV EIA E D DPR YF+QA+YGMYVRMAL+ +LG
Sbjct: 247 YILDGEKMKYAKKDMMVLHPLPRVNEIAYEIDQDPRGCYFKQAKYGMYVRMALIAKLLG 305
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 43/59 (72%)
Query: 85 YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLG 143
YI+ + M AK M V+HPLPRV EIA E D DPR YF+QA+YGMYVRMAL+ +LG
Sbjct: 247 YILDGEKMKYAKKDMMVLHPLPRVNEIAYEIDQDPRGCYFKQAKYGMYVRMALIAKLLG 305
>sp|B1INE7|PYRB_CLOBK Aspartate carbamoyltransferase OS=Clostridium botulinum (strain
Okra / Type B1) GN=pyrB PE=3 SV=1
Length = 307
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 43/59 (72%)
Query: 9 YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLG 67
YI+ + M AK M V+HPLPRV EIA E D DPR YF+QA+YGMYVRMAL+ +LG
Sbjct: 247 YILDGEKMRYAKKDMMVLHPLPRVNEIAYEIDQDPRGCYFKQAKYGMYVRMALIAKLLG 305
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 43/59 (72%)
Query: 85 YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLG 143
YI+ + M AK M V+HPLPRV EIA E D DPR YF+QA+YGMYVRMAL+ +LG
Sbjct: 247 YILDGEKMRYAKKDMMVLHPLPRVNEIAYEIDQDPRGCYFKQAKYGMYVRMALIAKLLG 305
>sp|Q43064|PYRB3_PEA Aspartate carbamoyltransferase 3, chloroplastic OS=Pisum sativum
GN=PYRB3 PE=2 SV=1
Length = 391
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 47/64 (73%)
Query: 79 KKSCGLYIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALL 138
+K+ G +IV I+ + +MHPLPR+ EI + D+DPRAAYFRQA+YG+Y+RMALL
Sbjct: 325 EKARGKFIVNQNILNAMQRHAVIMHPLPRLDEITVDVDADPRAAYFRQAKYGLYIRMALL 384
Query: 139 TMVL 142
++L
Sbjct: 385 KLLL 388
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 44/60 (73%)
Query: 7 GLYIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVL 66
G +IV I+ + +MHPLPR+ EI + D+DPRAAYFRQA+YG+Y+RMALL ++L
Sbjct: 329 GKFIVNQNILNAMQRHAVIMHPLPRLDEITVDVDADPRAAYFRQAKYGLYIRMALLKLLL 388
>sp|Q43087|PYRB2_PEA Aspartate carbamoyltransferase 2, chloroplastic OS=Pisum sativum
GN=PYRB2 PE=2 SV=1
Length = 385
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 47/64 (73%)
Query: 79 KKSCGLYIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALL 138
+K+ G +IV I+ + +MHPLPR+ EI + D+DPRAAYFRQA+YG+Y+RMALL
Sbjct: 319 EKARGKFIVNQNILNAMQRHAVIMHPLPRLDEITVDVDADPRAAYFRQAKYGLYIRMALL 378
Query: 139 TMVL 142
++L
Sbjct: 379 KLLL 382
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 44/60 (73%)
Query: 7 GLYIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVL 66
G +IV I+ + +MHPLPR+ EI + D+DPRAAYFRQA+YG+Y+RMALL ++L
Sbjct: 323 GKFIVNQNILNAMQRHAVIMHPLPRLDEITVDVDADPRAAYFRQAKYGLYIRMALLKLLL 382
>sp|A9KNJ3|PYRB_CLOPH Aspartate carbamoyltransferase OS=Clostridium phytofermentans
(strain ATCC 700394 / DSM 18823 / ISDg) GN=pyrB PE=3
SV=1
Length = 307
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 44/59 (74%)
Query: 9 YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLG 67
+I+ K M AK M V+HPLPRV EIA E D+DPRA YF+QAE+G+Y RMAL+ ++L
Sbjct: 244 FILDAKKMEGAKEDMLVLHPLPRVNEIATEIDNDPRAVYFKQAEFGVYARMALIMLLLN 302
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 44/59 (74%)
Query: 85 YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLG 143
+I+ K M AK M V+HPLPRV EIA E D+DPRA YF+QAE+G+Y RMAL+ ++L
Sbjct: 244 FILDAKKMEGAKEDMLVLHPLPRVNEIATEIDNDPRAVYFKQAEFGVYARMALIMLLLN 302
>sp|A5N2L8|PYRB_CLOK5 Aspartate carbamoyltransferase OS=Clostridium kluyveri (strain ATCC
8527 / DSM 555 / NCIMB 10680) GN=pyrB PE=3 SV=1
Length = 306
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 44/59 (74%)
Query: 9 YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLG 67
YI+ +++A M V+HPLPRV EI+ E D DPRA YF+QA+YGMYVRMAL+ +LG
Sbjct: 246 YILDKGKISRAAKDMIVLHPLPRVNEISYEIDKDPRAYYFKQAKYGMYVRMALMIKLLG 304
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 44/59 (74%)
Query: 85 YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLG 143
YI+ +++A M V+HPLPRV EI+ E D DPRA YF+QA+YGMYVRMAL+ +LG
Sbjct: 246 YILDKGKISRAAKDMIVLHPLPRVNEISYEIDKDPRAYYFKQAKYGMYVRMALMIKLLG 304
>sp|B9E695|PYRB_CLOK1 Aspartate carbamoyltransferase OS=Clostridium kluyveri (strain NBRC
12016) GN=pyrB PE=3 SV=1
Length = 306
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 44/59 (74%)
Query: 9 YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLG 67
YI+ +++A M V+HPLPRV EI+ E D DPRA YF+QA+YGMYVRMAL+ +LG
Sbjct: 246 YILDKGKISRAAKDMIVLHPLPRVNEISYEIDKDPRAYYFKQAKYGMYVRMALMIKLLG 304
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 44/59 (74%)
Query: 85 YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLG 143
YI+ +++A M V+HPLPRV EI+ E D DPRA YF+QA+YGMYVRMAL+ +LG
Sbjct: 246 YILDKGKISRAAKDMIVLHPLPRVNEISYEIDKDPRAYYFKQAKYGMYVRMALMIKLLG 304
>sp|Q18CS8|PYRB_CLOD6 Aspartate carbamoyltransferase OS=Clostridium difficile (strain
630) GN=pyrB PE=3 SV=1
Length = 306
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 42/59 (71%)
Query: 9 YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLG 67
YI+ + KA M VMHPLPRV EI + DSD RA YF+QA+YGMYVRMAL+ +LG
Sbjct: 244 YILNKAKLEKASKDMLVMHPLPRVNEIDIDVDSDDRAVYFKQAKYGMYVRMALIIKLLG 302
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 42/59 (71%)
Query: 85 YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLG 143
YI+ + KA M VMHPLPRV EI + DSD RA YF+QA+YGMYVRMAL+ +LG
Sbjct: 244 YILNKAKLEKASKDMLVMHPLPRVNEIDIDVDSDDRAVYFKQAKYGMYVRMALIIKLLG 302
>sp|A8MIU1|PYRB_ALKOO Aspartate carbamoyltransferase OS=Alkaliphilus oremlandii (strain
OhILAs) GN=pyrB PE=3 SV=1
Length = 331
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 43/60 (71%)
Query: 9 YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLGR 68
YI+T ++ AK + ++HPLPRV EI E D DPRA YF QA+ G+YVRMAL+ ++LG
Sbjct: 248 YILTNSLLENAKQDLIILHPLPRVNEIHTEVDRDPRAKYFEQAKMGVYVRMALMALLLGN 307
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 43/60 (71%)
Query: 85 YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLGR 144
YI+T ++ AK + ++HPLPRV EI E D DPRA YF QA+ G+YVRMAL+ ++LG
Sbjct: 248 YILTNSLLENAKQDLIILHPLPRVNEIHTEVDRDPRAKYFEQAKMGVYVRMALMALLLGN 307
>sp|P77918|PYRB_PYRAB Aspartate carbamoyltransferase OS=Pyrococcus abyssi (strain GE5 /
Orsay) GN=pyrB PE=1 SV=1
Length = 308
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 61/120 (50%), Gaps = 11/120 (9%)
Query: 35 IAPEFDSDPRAAYFRQAEYGM-YVRMALLTMVLGRDSALTYSNTPK----------KSCG 83
I+PE PR E GM V L V+G+ L + K K G
Sbjct: 187 ISPELLRMPRHIVEELREKGMKVVETTTLEDVIGKLDVLYVTRIQKERFPDEQEYLKVKG 246
Query: 84 LYIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLG 143
Y V K++ KAK ++ +MHPLPRV EI PE D+ A YFRQ G+ VRMALL +VLG
Sbjct: 247 SYQVNLKVLEKAKDELRIMHPLPRVDEIHPEVDNTKHAIYFRQVFNGVPVRMALLALVLG 306
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 42/61 (68%)
Query: 7 GLYIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVL 66
G Y V K++ KAK ++ +MHPLPRV EI PE D+ A YFRQ G+ VRMALL +VL
Sbjct: 246 GSYQVNLKVLEKAKDELRIMHPLPRVDEIHPEVDNTKHAIYFRQVFNGVPVRMALLALVL 305
Query: 67 G 67
G
Sbjct: 306 G 306
>sp|Q18J05|PYRB_HALWD Aspartate carbamoyltransferase OS=Haloquadratum walsbyi (strain DSM
16790) GN=pyrB PE=3 SV=1
Length = 304
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 45/70 (64%)
Query: 75 SNTPKKSCGLYIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVR 134
N ++ G Y V I++ A + + VMHPLPRV EIAPE D+ AAYF QA G+ VR
Sbjct: 233 ENEYQRVAGQYRVDTDILSHADNNLTVMHPLPRVDEIAPEVDTTEHAAYFEQAHNGVPVR 292
Query: 135 MALLTMVLGR 144
MALL ++GR
Sbjct: 293 MALLDALIGR 302
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 42/63 (66%)
Query: 6 CGLYIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMV 65
G Y V I++ A + + VMHPLPRV EIAPE D+ AAYF QA G+ VRMALL +
Sbjct: 240 AGQYRVDTDILSHADNNLTVMHPLPRVDEIAPEVDTTEHAAYFEQAHNGVPVRMALLDAL 299
Query: 66 LGR 68
+GR
Sbjct: 300 IGR 302
>sp|Q9HHN4|PYRB_HALSA Aspartate carbamoyltransferase OS=Halobacterium salinarum (strain
ATCC 700922 / JCM 11081 / NRC-1) GN=pyrB PE=3 SV=2
Length = 310
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 44/74 (59%)
Query: 75 SNTPKKSCGLYIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVR 134
N +K G Y +T + AK + +MHPLPRV EIAPE D AAYF QA G+ VR
Sbjct: 234 ENEYQKVAGEYQLTATHLEAAKDDLTIMHPLPRVDEIAPEIDDTDHAAYFEQAHNGVPVR 293
Query: 135 MALLTMVLGRDSAL 148
MALL +VL D +
Sbjct: 294 MALLDLVLSADGGV 307
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 41/67 (61%)
Query: 6 CGLYIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMV 65
G Y +T + AK + +MHPLPRV EIAPE D AAYF QA G+ VRMALL +V
Sbjct: 241 AGEYQLTATHLEAAKDDLTIMHPLPRVDEIAPEIDDTDHAAYFEQAHNGVPVRMALLDLV 300
Query: 66 LGRDSAL 72
L D +
Sbjct: 301 LSADGGV 307
>sp|B0S198|PYRB_FINM2 Aspartate carbamoyltransferase OS=Finegoldia magna (strain ATCC
29328) GN=pyrB PE=3 SV=1
Length = 306
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 41/59 (69%)
Query: 9 YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLG 67
YI+ M A +AV+HPLPRV EIA E DSDPRA YF+Q YG+ VRMAL+ +LG
Sbjct: 246 YILDNDKMKLATEDLAVLHPLPRVNEIATEVDSDPRAVYFKQVRYGVIVRMALILKLLG 304
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 41/59 (69%)
Query: 85 YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLG 143
YI+ M A +AV+HPLPRV EIA E DSDPRA YF+Q YG+ VRMAL+ +LG
Sbjct: 246 YILDNDKMKLATEDLAVLHPLPRVNEIATEVDSDPRAVYFKQVRYGVIVRMALILKLLG 304
>sp|Q43086|PYRB1_PEA Aspartate carbamoyltransferase 1, chloroplastic OS=Pisum sativum
GN=PYRB1 PE=2 SV=1
Length = 386
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 48/67 (71%)
Query: 76 NTPKKSCGLYIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRM 135
N +++ G YIV ++ ++ VMHPLP++ EI + D+DPRAAYFRQA+ G+Y+RM
Sbjct: 317 NLYEEARGKYIVNQDVLKVMQNHAVVMHPLPKLDEIEADVDNDPRAAYFRQAKNGLYIRM 376
Query: 136 ALLTMVL 142
ALL ++L
Sbjct: 377 ALLKVLL 383
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 44/60 (73%)
Query: 7 GLYIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVL 66
G YIV ++ ++ VMHPLP++ EI + D+DPRAAYFRQA+ G+Y+RMALL ++L
Sbjct: 324 GKYIVNQDVLKVMQNHAVVMHPLPKLDEIEADVDNDPRAAYFRQAKNGLYIRMALLKVLL 383
>sp|A0Q2N5|PYRB_CLONN Aspartate carbamoyltransferase OS=Clostridium novyi (strain NT)
GN=pyrB PE=3 SV=1
Length = 306
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 41/59 (69%)
Query: 9 YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLG 67
Y++ + M AK M V+HPLPRV EI+ D D RA YF+QA +GM+VRMAL+ VLG
Sbjct: 246 YVLDKEKMNVAKEDMMVLHPLPRVNEISTNVDDDKRACYFKQARFGMFVRMALIAKVLG 304
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 41/59 (69%)
Query: 85 YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLG 143
Y++ + M AK M V+HPLPRV EI+ D D RA YF+QA +GM+VRMAL+ VLG
Sbjct: 246 YVLDKEKMNVAKEDMMVLHPLPRVNEISTNVDDDKRACYFKQARFGMFVRMALIAKVLG 304
>sp|P49077|PYRB_ARATH Aspartate carbamoyltransferase, chloroplastic OS=Arabidopsis
thaliana GN=PYRB PE=2 SV=2
Length = 390
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 44/60 (73%)
Query: 7 GLYIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVL 66
G YIV ++ + K +MHPLPR+ EI + D+DPRAAYFRQA+ G+++RMALL ++L
Sbjct: 328 GKYIVDKDLLGVMQKKAIIMHPLPRLDEITADVDADPRAAYFRQAKNGLFIRMALLKLLL 387
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 44/60 (73%)
Query: 83 GLYIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVL 142
G YIV ++ + K +MHPLPR+ EI + D+DPRAAYFRQA+ G+++RMALL ++L
Sbjct: 328 GKYIVDKDLLGVMQKKAIIMHPLPRLDEITADVDADPRAAYFRQAKNGLFIRMALLKLLL 387
>sp|Q97B29|PYRB_THEVO Aspartate carbamoyltransferase OS=Thermoplasma volcanium (strain
ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1)
GN=pyrB PE=3 SV=1
Length = 305
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 46/68 (67%)
Query: 76 NTPKKSCGLYIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRM 135
N + G Y + + + K K K +MHPLPRV EI+P+ D+ P+AAYFRQA YG+ VRM
Sbjct: 237 NEYQSVIGSYSINSETVEKMKKKSVIMHPLPRVDEISPDVDNMPQAAYFRQAYYGVPVRM 296
Query: 136 ALLTMVLG 143
AL+ +LG
Sbjct: 297 ALIYKILG 304
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%)
Query: 6 CGLYIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMV 65
G Y + + + K K K +MHPLPRV EI+P+ D+ P+AAYFRQA YG+ VRMAL+ +
Sbjct: 243 IGSYSINSETVEKMKKKSVIMHPLPRVDEISPDVDNMPQAAYFRQAYYGVPVRMALIYKI 302
Query: 66 LG 67
LG
Sbjct: 303 LG 304
>sp|A6TVR2|PYRB_ALKMQ Aspartate carbamoyltransferase OS=Alkaliphilus metalliredigens
(strain QYMF) GN=pyrB PE=3 SV=1
Length = 311
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 42/59 (71%)
Query: 9 YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLG 67
YI+ + + AK + +MHPLPRV EI PE D+D RA YF QA+ G+YVRMAL+ + LG
Sbjct: 248 YILDLQKLRNAKEDLLIMHPLPRVNEIHPEVDTDTRAKYFEQAKLGVYVRMALMALQLG 306
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 42/59 (71%)
Query: 85 YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLG 143
YI+ + + AK + +MHPLPRV EI PE D+D RA YF QA+ G+YVRMAL+ + LG
Sbjct: 248 YILDLQKLRNAKEDLLIMHPLPRVNEIHPEVDTDTRAKYFEQAKLGVYVRMALMALQLG 306
>sp|A1A1F7|PYRB_BIFAA Aspartate carbamoyltransferase OS=Bifidobacterium adolescentis
(strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a)
GN=pyrB PE=3 SV=2
Length = 320
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 41/59 (69%)
Query: 9 YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLG 67
YI+ M AK MAV+HPLPRV EIA E D DPRAAYF Q + GM +RMAL + V+G
Sbjct: 246 YILDEAKMAYAKKDMAVLHPLPRVNEIAVEVDDDPRAAYFEQVKNGMLMRMALESSVVG 304
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 41/59 (69%)
Query: 85 YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLG 143
YI+ M AK MAV+HPLPRV EIA E D DPRAAYF Q + GM +RMAL + V+G
Sbjct: 246 YILDEAKMAYAKKDMAVLHPLPRVNEIAVEVDDDPRAAYFEQVKNGMLMRMALESSVVG 304
>sp|Q0STN4|PYRB_CLOPS Aspartate carbamoyltransferase OS=Clostridium perfringens (strain
SM101 / Type A) GN=pyrB PE=3 SV=1
Length = 307
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 42/61 (68%)
Query: 8 LYIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLG 67
+Y++ M AK M V+HPLPRV EIA E D D RA YF+QA+ GMYVRMAL+ +LG
Sbjct: 246 VYVLDEAKMKGAKEDMMVLHPLPRVNEIAYEVDEDSRAFYFKQAKCGMYVRMALMAKLLG 305
Query: 68 R 68
Sbjct: 306 E 306
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 42/61 (68%)
Query: 84 LYIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLG 143
+Y++ M AK M V+HPLPRV EIA E D D RA YF+QA+ GMYVRMAL+ +LG
Sbjct: 246 VYVLDEAKMKGAKEDMMVLHPLPRVNEIAYEVDEDSRAFYFKQAKCGMYVRMALMAKLLG 305
Query: 144 R 144
Sbjct: 306 E 306
>sp|Q0TRA8|PYRB_CLOP1 Aspartate carbamoyltransferase OS=Clostridium perfringens (strain
ATCC 13124 / NCTC 8237 / Type A) GN=pyrB PE=3 SV=1
Length = 307
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 42/61 (68%)
Query: 8 LYIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLG 67
+Y++ M AK M V+HPLPRV EIA E D D RA YF+QA+ GMYVRMAL+ +LG
Sbjct: 246 VYVLDEAKMKGAKEDMMVLHPLPRVNEIAYEVDEDSRAFYFKQAKCGMYVRMALMAKLLG 305
Query: 68 R 68
Sbjct: 306 E 306
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 42/61 (68%)
Query: 84 LYIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLG 143
+Y++ M AK M V+HPLPRV EIA E D D RA YF+QA+ GMYVRMAL+ +LG
Sbjct: 246 VYVLDEAKMKGAKEDMMVLHPLPRVNEIAYEVDEDSRAFYFKQAKCGMYVRMALMAKLLG 305
Query: 144 R 144
Sbjct: 306 E 306
>sp|B7GRV4|PYRB_BIFLS Aspartate carbamoyltransferase OS=Bifidobacterium longum subsp.
infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 /
NCTC 11817 / S12) GN=pyrB PE=3 SV=1
Length = 320
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 42/59 (71%)
Query: 9 YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLG 67
YI+ + + AK MAV+HPLPRV EIA + D DPRAAYF Q + GM VRMAL + V+G
Sbjct: 246 YILDEEKLQLAKPSMAVLHPLPRVNEIAVDVDDDPRAAYFEQVKNGMLVRMALESTVVG 304
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 42/59 (71%)
Query: 85 YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLG 143
YI+ + + AK MAV+HPLPRV EIA + D DPRAAYF Q + GM VRMAL + V+G
Sbjct: 246 YILDEEKLQLAKPSMAVLHPLPRVNEIAVDVDDDPRAAYFEQVKNGMLVRMALESTVVG 304
>sp|Q8G655|PYRB_BIFLO Aspartate carbamoyltransferase OS=Bifidobacterium longum (strain
NCC 2705) GN=pyrB PE=3 SV=2
Length = 320
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 42/59 (71%)
Query: 9 YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLG 67
YI+ + + AK MAV+HPLPRV EIA + D DPRAAYF Q + GM VRMAL + V+G
Sbjct: 246 YILDEEKLQLAKPSMAVLHPLPRVNEIAVDVDDDPRAAYFEQVKNGMLVRMALESTVVG 304
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 42/59 (71%)
Query: 85 YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLG 143
YI+ + + AK MAV+HPLPRV EIA + D DPRAAYF Q + GM VRMAL + V+G
Sbjct: 246 YILDEEKLQLAKPSMAVLHPLPRVNEIAVDVDDDPRAAYFEQVKNGMLVRMALESTVVG 304
>sp|B3DS61|PYRB_BIFLD Aspartate carbamoyltransferase OS=Bifidobacterium longum (strain
DJO10A) GN=pyrB PE=3 SV=1
Length = 320
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 42/59 (71%)
Query: 9 YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLG 67
YI+ + + AK MAV+HPLPRV EIA + D DPRAAYF Q + GM VRMAL + V+G
Sbjct: 246 YILDEEKLQLAKPSMAVLHPLPRVNEIAVDVDDDPRAAYFEQVKNGMLVRMALESTVVG 304
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 42/59 (71%)
Query: 85 YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLG 143
YI+ + + AK MAV+HPLPRV EIA + D DPRAAYF Q + GM VRMAL + V+G
Sbjct: 246 YILDEEKLQLAKPSMAVLHPLPRVNEIAVDVDDDPRAAYFEQVKNGMLVRMALESTVVG 304
>sp|Q8XL59|PYRB_CLOPE Aspartate carbamoyltransferase OS=Clostridium perfringens (strain
13 / Type A) GN=pyrB PE=3 SV=1
Length = 307
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 42/61 (68%)
Query: 8 LYIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLG 67
+Y++ M AK M V+HPLPRV EI+ E D D RA YF+QA+ GMYVRMAL+ +LG
Sbjct: 246 VYVLDEAKMKGAKEDMMVLHPLPRVNEISYEVDEDSRAFYFKQAKCGMYVRMALMAKLLG 305
Query: 68 R 68
Sbjct: 306 E 306
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 42/61 (68%)
Query: 84 LYIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLG 143
+Y++ M AK M V+HPLPRV EI+ E D D RA YF+QA+ GMYVRMAL+ +LG
Sbjct: 246 VYVLDEAKMKGAKEDMMVLHPLPRVNEISYEVDEDSRAFYFKQAKCGMYVRMALMAKLLG 305
Query: 144 R 144
Sbjct: 306 E 306
>sp|Q0W5I2|PYRB_UNCMA Aspartate carbamoyltransferase OS=Uncultured methanogenic archaeon
RC-I GN=pyrB PE=3 SV=1
Length = 308
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 45/67 (67%)
Query: 79 KKSCGLYIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALL 138
+K G Y +TP+ + VMHPLPRV EIAPE D+ A YF+Q+ YG+ VRMA+L
Sbjct: 241 QKVAGTYRITPETLAGVGRDTIVMHPLPRVDEIAPEVDATKHARYFQQSFYGVPVRMAVL 300
Query: 139 TMVLGRD 145
++V+G D
Sbjct: 301 SLVMGVD 307
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 43/64 (67%)
Query: 6 CGLYIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMV 65
G Y +TP+ + VMHPLPRV EIAPE D+ A YF+Q+ YG+ VRMA+L++V
Sbjct: 244 AGTYRITPETLAGVGRDTIVMHPLPRVDEIAPEVDATKHARYFQQSFYGVPVRMAVLSLV 303
Query: 66 LGRD 69
+G D
Sbjct: 304 MGVD 307
>sp|Q97FS3|PYRB_CLOAB Aspartate carbamoyltransferase OS=Clostridium acetobutylicum
(strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM
B-1787) GN=pyrB PE=3 SV=1
Length = 307
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 42/59 (71%)
Query: 9 YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLG 67
YI+ + AK M ++HPLPRV EI+ E D+D RA YF+QA+ GMYVRMAL+ ++G
Sbjct: 247 YILNENKLKTAKKDMIILHPLPRVNEISYEVDNDERAYYFKQAKNGMYVRMALMAKLMG 305
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 42/59 (71%)
Query: 85 YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLG 143
YI+ + AK M ++HPLPRV EI+ E D+D RA YF+QA+ GMYVRMAL+ ++G
Sbjct: 247 YILNENKLKTAKKDMIILHPLPRVNEISYEVDNDERAYYFKQAKNGMYVRMALMAKLMG 305
>sp|Q09794|PYR1_SCHPO Protein ura1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=ura1 PE=1 SV=1
Length = 2244
Score = 68.9 bits (167), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/60 (56%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 9 YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPR-AAYFRQAEYGMYVRMALLTMVLG 67
+IV ++ AKS VMHPLPR EI+ E D D R AAYFRQ YG+Y+RMALL V+G
Sbjct: 2179 FIVDNSVLASAKSHCIVMHPLPRNREISEEVDFDQRRAAYFRQMRYGLYIRMALLACVMG 2238
Score = 68.9 bits (167), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/60 (56%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 85 YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPR-AAYFRQAEYGMYVRMALLTMVLG 143
+IV ++ AKS VMHPLPR EI+ E D D R AAYFRQ YG+Y+RMALL V+G
Sbjct: 2179 FIVDNSVLASAKSHCIVMHPLPRNREISEEVDFDQRRAAYFRQMRYGLYIRMALLACVMG 2238
>sp|Q8U373|PYRB_PYRFU Aspartate carbamoyltransferase OS=Pyrococcus furiosus (strain ATCC
43587 / DSM 3638 / JCM 8422 / Vc1) GN=pyrB PE=3 SV=1
Length = 308
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 60/120 (50%), Gaps = 11/120 (9%)
Query: 35 IAPEFDSDPRAAYFRQAEYGMYV-RMALLTMVLGRDSALTYSNTPK----------KSCG 83
I+PE PR E G+ V + L V+G L + K K G
Sbjct: 187 ISPELLRMPRHIVEELREKGVTVYETSDLMSVIGELDVLYVTRIQKERFPDEQEYLKVRG 246
Query: 84 LYIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLG 143
Y V ++++KAK + VMHPLPRV EI PE D A YF+Q G+ VRMALL +VLG
Sbjct: 247 SYQVNLQVLSKAKETLKVMHPLPRVDEIHPEVDKTKHAIYFKQVFNGIPVRMALLGLVLG 306
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 41/61 (67%)
Query: 7 GLYIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVL 66
G Y V ++++KAK + VMHPLPRV EI PE D A YF+Q G+ VRMALL +VL
Sbjct: 246 GSYQVNLQVLSKAKETLKVMHPLPRVDEIHPEVDKTKHAIYFKQVFNGIPVRMALLGLVL 305
Query: 67 G 67
G
Sbjct: 306 G 306
>sp|A2BJ24|PYRB_HYPBU Aspartate carbamoyltransferase OS=Hyperthermus butylicus (strain
DSM 5456 / JCM 9403) GN=pyrB PE=3 SV=1
Length = 315
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Query: 79 KKSCGLYIVTPKIMTK-AKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMAL 137
+K G Y VT +++ + A+ ++ ++HPLPRV EIAPE D P AAYF QA G+ VRMAL
Sbjct: 247 EKVRGSYRVTLELLEQHARRELRILHPLPRVDEIAPEVDGTPYAAYFEQARNGVPVRMAL 306
Query: 138 LTMVLGRD 145
L ++ GR+
Sbjct: 307 LALIAGRE 314
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 7 GLYIVTPKIMTK-AKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMV 65
G Y VT +++ + A+ ++ ++HPLPRV EIAPE D P AAYF QA G+ VRMALL ++
Sbjct: 251 GSYRVTLELLEQHARRELRILHPLPRVDEIAPEVDGTPYAAYFEQARNGVPVRMALLALI 310
Query: 66 LGRD 69
GR+
Sbjct: 311 AGRE 314
>sp|B9LND9|PYRB_HALLT Aspartate carbamoyltransferase OS=Halorubrum lacusprofundi (strain
ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=pyrB PE=3
SV=1
Length = 313
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 57/119 (47%), Gaps = 11/119 (9%)
Query: 35 IAPEFDSDPRAAYFRQAEYGMYVRMAL-LTMVLGRDSALTYSNTPKKS----------CG 83
I+PE PR+ F E G VR L VLG L + K+ G
Sbjct: 182 ISPESLRLPRSVRFDLHETGAQVREHTDLEGVLGELDVLYVTRIQKERFPDENEYHRVAG 241
Query: 84 LYIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVL 142
Y + + + A + VMHPLPRV EIAP+ D A YF QA G+ VRMALL ++L
Sbjct: 242 EYQIDAETLEDAPDDLTVMHPLPRVDEIAPDVDETDHATYFEQAHNGIPVRMALLDILL 300
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 37/61 (60%)
Query: 6 CGLYIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMV 65
G Y + + + A + VMHPLPRV EIAP+ D A YF QA G+ VRMALL ++
Sbjct: 240 AGEYQIDAETLEDAPDDLTVMHPLPRVDEIAPDVDETDHATYFEQAHNGIPVRMALLDIL 299
Query: 66 L 66
L
Sbjct: 300 L 300
>sp|Q12ZP0|PYRB_METBU Aspartate carbamoyltransferase OS=Methanococcoides burtonii (strain
DSM 6242) GN=pyrB PE=3 SV=1
Length = 308
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 45/65 (69%)
Query: 79 KKSCGLYIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALL 138
+K +++P+++ KAK ++ VMHPLPR EI P D+ A YF+Q+ YG+ +RMALL
Sbjct: 241 RKVANSLLISPELLEKAKPELKVMHPLPRTNEIDPRVDNTKHACYFKQSFYGVPIRMALL 300
Query: 139 TMVLG 143
+V+G
Sbjct: 301 ALVMG 305
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 43/58 (74%)
Query: 10 IVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLG 67
+++P+++ KAK ++ VMHPLPR EI P D+ A YF+Q+ YG+ +RMALL +V+G
Sbjct: 248 LISPELLEKAKPELKVMHPLPRTNEIDPRVDNTKHACYFKQSFYGVPIRMALLALVMG 305
>sp|O58451|PYRB_PYRHO Aspartate carbamoyltransferase OS=Pyrococcus horikoshii (strain
ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=pyrB PE=3 SV=1
Length = 308
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 56/120 (46%), Gaps = 11/120 (9%)
Query: 35 IAPEFDSDPRAAYFRQAEYGM-YVRMALLTMVLGRDSALTYSNTPK----------KSCG 83
I+PE P+ E GM V L V+G L + K K G
Sbjct: 187 ISPELLRMPKHIVEELRERGMKIVETTKLEEVIGELDVLYVTRIQKERFPDEQEYLKVKG 246
Query: 84 LYIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLG 143
Y V KI+ K + +MHPLPRV EI PE D A YF+Q G+ VRMALL +VLG
Sbjct: 247 SYQVNLKILENVKDSLRIMHPLPRVDEIHPEVDKTKHAIYFKQVFNGVPVRMALLALVLG 306
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 38/61 (62%)
Query: 7 GLYIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVL 66
G Y V KI+ K + +MHPLPRV EI PE D A YF+Q G+ VRMALL +VL
Sbjct: 246 GSYQVNLKILENVKDSLRIMHPLPRVDEIHPEVDKTKHAIYFKQVFNGVPVRMALLALVL 305
Query: 67 G 67
G
Sbjct: 306 G 306
>sp|B7LMR8|PYRB_ESCF3 Aspartate carbamoyltransferase OS=Escherichia fergusonii (strain
ATCC 35469 / DSM 13698 / CDC 0568-73) GN=pyrB PE=3 SV=1
Length = 311
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 41/64 (64%)
Query: 9 YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLGR 68
+++ + AK+ M V+HPLPRV EIA + D P A YF+QA G++ R ALL +VL R
Sbjct: 248 FVLRASDLHNAKTNMKVLHPLPRVDEIATDVDKTPHAWYFQQAGNGIFARQALLALVLNR 307
Query: 69 DSAL 72
D L
Sbjct: 308 DLVL 311
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 41/64 (64%)
Query: 85 YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLGR 144
+++ + AK+ M V+HPLPRV EIA + D P A YF+QA G++ R ALL +VL R
Sbjct: 248 FVLRASDLHNAKTNMKVLHPLPRVDEIATDVDKTPHAWYFQQAGNGIFARQALLALVLNR 307
Query: 145 DSAL 148
D L
Sbjct: 308 DLVL 311
>sp|B7LCV3|PYRB_ECO55 Aspartate carbamoyltransferase OS=Escherichia coli (strain 55989 /
EAEC) GN=pyrB PE=3 SV=1
Length = 311
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 41/64 (64%)
Query: 9 YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLGR 68
+++ + AK+ M V+HPLPRV EIA + D P A YF+QA G++ R ALL +VL R
Sbjct: 248 FVLRASDLHNAKANMKVLHPLPRVDEIATDVDKTPHAWYFQQAGNGIFARQALLALVLNR 307
Query: 69 DSAL 72
D L
Sbjct: 308 DLVL 311
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 41/64 (64%)
Query: 85 YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLGR 144
+++ + AK+ M V+HPLPRV EIA + D P A YF+QA G++ R ALL +VL R
Sbjct: 248 FVLRASDLHNAKANMKVLHPLPRVDEIATDVDKTPHAWYFQQAGNGIFARQALLALVLNR 307
Query: 145 DSAL 148
D L
Sbjct: 308 DLVL 311
>sp|Q3YUA6|PYRB_SHISS Aspartate carbamoyltransferase OS=Shigella sonnei (strain Ss046)
GN=pyrB PE=3 SV=1
Length = 311
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 41/64 (64%)
Query: 9 YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLGR 68
+++ + AK+ M V+HPLPRV EIA + D P A YF+QA G++ R ALL +VL R
Sbjct: 248 FVLRASDLHNAKANMKVLHPLPRVDEIATDVDKTPHAWYFQQAGNGIFARQALLALVLNR 307
Query: 69 DSAL 72
D L
Sbjct: 308 DLVL 311
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 41/64 (64%)
Query: 85 YIVTPKIMTKAKSKMAVMHPLPRVFEIAPEFDSDPRAAYFRQAEYGMYVRMALLTMVLGR 144
+++ + AK+ M V+HPLPRV EIA + D P A YF+QA G++ R ALL +VL R
Sbjct: 248 FVLRASDLHNAKANMKVLHPLPRVDEIATDVDKTPHAWYFQQAGNGIFARQALLALVLNR 307
Query: 145 DSAL 148
D L
Sbjct: 308 DLVL 311
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.134 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,826,627
Number of Sequences: 539616
Number of extensions: 1842879
Number of successful extensions: 4253
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 313
Number of HSP's successfully gapped in prelim test: 239
Number of HSP's that attempted gapping in prelim test: 3329
Number of HSP's gapped (non-prelim): 1103
length of query: 157
length of database: 191,569,459
effective HSP length: 108
effective length of query: 49
effective length of database: 133,290,931
effective search space: 6531255619
effective search space used: 6531255619
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 56 (26.2 bits)