BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy4401
         (147 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|322794486|gb|EFZ17539.1| hypothetical protein SINV_01156 [Solenopsis invicta]
          Length = 310

 Score = 87.0 bits (214), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 40/64 (62%), Positives = 49/64 (76%), Gaps = 4/64 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEGGGRYRNVRRKSSDIQHRKQAH 63
           NSIRHNLSLNKCFVK+PRSKD+PGKGGFWKLDL+++EEG    +  RR+S+  Q  +   
Sbjct: 151 NSIRHNLSLNKCFVKLPRSKDEPGKGGFWKLDLERMEEG----KRSRRRSAFSQRTRGTK 206

Query: 64  RPKP 67
           R  P
Sbjct: 207 RQSP 210


>gi|332030764|gb|EGI70440.1| Forkhead box protein J1-B [Acromyrmex echinatior]
          Length = 309

 Score = 86.7 bits (213), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 39/65 (60%), Positives = 50/65 (76%), Gaps = 4/65 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEGGGRYRNVRRKSSDIQHRKQAH 63
           NSIRHNLSLNKCF+K+PRSKD+PGKGGFWKLDL+++EEG    +  RR+S+  Q  +   
Sbjct: 152 NSIRHNLSLNKCFLKLPRSKDEPGKGGFWKLDLERMEEG----KRSRRRSAISQRTRSTK 207

Query: 64  RPKPA 68
           R  P+
Sbjct: 208 RQSPS 212


>gi|383862109|ref|XP_003706526.1| PREDICTED: forkhead box protein J1-B-like [Megachile rotundata]
          Length = 282

 Score = 85.1 bits (209), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 42/79 (53%), Positives = 54/79 (68%), Gaps = 4/79 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEGGGRYRNVRRKSSDIQHRKQAH 63
           NSIRHNLSLNKCFVK+PRSKD+PGKGGFWKLDL+++EEG    R  +R+++  Q  +   
Sbjct: 143 NSIRHNLSLNKCFVKLPRSKDEPGKGGFWKLDLERMEEG----RKSKRRATMSQRVRGTK 198

Query: 64  RPKPAPSENLNTAYTNNNS 82
               A +   N+A  N  S
Sbjct: 199 NLTLAKTTVTNSAQNNGAS 217


>gi|328783542|ref|XP_003250310.1| PREDICTED: forkhead box protein J1-like [Apis mellifera]
          Length = 283

 Score = 83.2 bits (204), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 38/55 (69%), Positives = 46/55 (83%), Gaps = 4/55 (7%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEGGGRYRNVRRKSSDIQH 58
           NSIRHNLSLNKCFVK+PRSKD+PGKGGFWKLDL+++EEG    R  +R++S  Q 
Sbjct: 143 NSIRHNLSLNKCFVKLPRSKDEPGKGGFWKLDLERMEEG----RKSKRRASMSQR 193


>gi|350423790|ref|XP_003493592.1| PREDICTED: forkhead box protein J1-B-like [Bombus impatiens]
          Length = 282

 Score = 83.2 bits (204), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 42/77 (54%), Positives = 54/77 (70%), Gaps = 9/77 (11%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEGGGRYRNVRRKSSDIQHRKQAH 63
           NSIRHNLSLNKCFVK+PRSKD+PGKGGFWKLDL+++EEG    R  +R+++  Q  + + 
Sbjct: 143 NSIRHNLSLNKCFVKLPRSKDEPGKGGFWKLDLERMEEG----RKSKRRATMSQRIRGSK 198

Query: 64  RPKPAPSENLNTAYTNN 80
           +   A      T  TNN
Sbjct: 199 KLTAA-----KTMVTNN 210


>gi|340722095|ref|XP_003399445.1| PREDICTED: forkhead box protein J1-B-like [Bombus terrestris]
          Length = 282

 Score = 83.2 bits (204), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 40/76 (52%), Positives = 54/76 (71%), Gaps = 4/76 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEGGGRYRNVRRKSSDIQHRKQAH 63
           NSIRHNLSLNKCFVK+PRSKD+PGKGGFWKLDL+++EEG    R  +R+++  Q  + + 
Sbjct: 143 NSIRHNLSLNKCFVKLPRSKDEPGKGGFWKLDLERMEEG----RKSKRRATMSQRIRGSK 198

Query: 64  RPKPAPSENLNTAYTN 79
           +   A +   N   +N
Sbjct: 199 KLTAAKTMVTNNIQSN 214


>gi|345493297|ref|XP_003427039.1| PREDICTED: forkhead box protein J1-B-like [Nasonia vitripennis]
          Length = 338

 Score = 82.8 bits (203), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 35/39 (89%), Positives = 39/39 (100%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG 42
           NSIRHNLSLNKCFVK+PRSKD+PGKGGFWKLDL++LEEG
Sbjct: 173 NSIRHNLSLNKCFVKLPRSKDEPGKGGFWKLDLERLEEG 211


>gi|307201887|gb|EFN81516.1| Forkhead box protein J1-B [Harpegnathos saltator]
          Length = 301

 Score = 82.8 bits (203), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 38/66 (57%), Positives = 51/66 (77%), Gaps = 5/66 (7%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEGGGRYRNVRRKSSDIQHRKQAH 63
           NSIRHNLSLNKCF+K+PRSKD+PGKGGFWKLD++++EEG    +  RR+S+ I  R +  
Sbjct: 143 NSIRHNLSLNKCFIKLPRSKDEPGKGGFWKLDIERMEEG----KRSRRRSA-ISQRIRGS 197

Query: 64  RPKPAP 69
           + +  P
Sbjct: 198 KNRQCP 203


>gi|307184440|gb|EFN70849.1| Forkhead box protein J1 [Camponotus floridanus]
          Length = 308

 Score = 82.8 bits (203), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 38/60 (63%), Positives = 46/60 (76%), Gaps = 9/60 (15%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG---------GGRYRNVRRKSS 54
           NSIRHNLSLNKCFVK+PRSKD+PGKGGFWKLDL+++EE            R RN +++SS
Sbjct: 150 NSIRHNLSLNKCFVKLPRSKDEPGKGGFWKLDLERMEESKRSRRRSAISQRIRNSKKQSS 209


>gi|380016380|ref|XP_003692163.1| PREDICTED: forkhead box protein J1-B-like [Apis florea]
          Length = 278

 Score = 82.0 bits (201), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 37/55 (67%), Positives = 46/55 (83%), Gaps = 4/55 (7%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEGGGRYRNVRRKSSDIQH 58
           NSIRHNLSLNKCFVK+PRSKD+PGKGGFWKLDL+++EEG    R  +R+++  Q 
Sbjct: 140 NSIRHNLSLNKCFVKLPRSKDEPGKGGFWKLDLERMEEG----RKSKRRATMSQR 190


>gi|270011538|gb|EFA07986.1| hypothetical protein TcasGA2_TC005573 [Tribolium castaneum]
          Length = 376

 Score = 78.6 bits (192), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 38/62 (61%), Positives = 44/62 (70%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEGGGRYRNVRRKSSDIQHRKQAH 63
           NSIRHNLSLNKCFVKV RSKD+PGKGGFWKLDL++LEE     R         ++R   H
Sbjct: 218 NSIRHNLSLNKCFVKVARSKDEPGKGGFWKLDLERLEESRRSKRRSSLTVRVPRNRDAPH 277

Query: 64  RP 65
           +P
Sbjct: 278 KP 279


>gi|242005809|ref|XP_002423753.1| forkhead protein/ forkhead protein domain, putative [Pediculus
           humanus corporis]
 gi|212506955|gb|EEB11015.1| forkhead protein/ forkhead protein domain, putative [Pediculus
           humanus corporis]
          Length = 520

 Score = 78.2 bits (191), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 32/39 (82%), Positives = 38/39 (97%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG 42
           NSIRHNLSLNKCFVK+PRSK++PGKGGFW+LD++ LEEG
Sbjct: 386 NSIRHNLSLNKCFVKIPRSKNEPGKGGFWRLDIKILEEG 424


>gi|444727815|gb|ELW68293.1| Forkhead box protein J1 [Tupaia chinensis]
          Length = 453

 Score = 74.3 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/70 (52%), Positives = 44/70 (62%), Gaps = 4/70 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE-GGGRYRNVRRKSSDIQ---HR 59
           NSIRHNLSLNKCF+KVPR KD+PGKGGFW++D Q  E    G ++  RR    I     R
Sbjct: 177 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRRRPQVHIHPAFAR 236

Query: 60  KQAHRPKPAP 69
           + A  P   P
Sbjct: 237 QAAQEPSAVP 246


>gi|109118372|ref|XP_001104114.1| PREDICTED: forkhead box protein J1 [Macaca mulatta]
 gi|355568942|gb|EHH25223.1| hypothetical protein EGK_09005 [Macaca mulatta]
          Length = 421

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/84 (46%), Positives = 47/84 (55%), Gaps = 4/84 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE-GGGRYRNVRRKSSDIQ---HR 59
           NSIRHNLSLNKCF+KVPR KD+PGKGGFW++D Q  E    G ++  R     I     R
Sbjct: 167 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRRLPPVHIHPAFAR 226

Query: 60  KQAHRPKPAPSENLNTAYTNNNSI 83
           + A  P   P   L T  T    +
Sbjct: 227 QAAQEPSAVPRAGLLTVNTEAQQL 250


>gi|402901152|ref|XP_003913520.1| PREDICTED: forkhead box protein J1 [Papio anubis]
          Length = 421

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/84 (46%), Positives = 47/84 (55%), Gaps = 4/84 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE-GGGRYRNVRRKSSDIQ---HR 59
           NSIRHNLSLNKCF+KVPR KD+PGKGGFW++D Q  E    G ++  R     I     R
Sbjct: 167 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRRLPPVHIHPAFAR 226

Query: 60  KQAHRPKPAPSENLNTAYTNNNSI 83
           + A  P   P   L T  T    +
Sbjct: 227 QAAQEPSTVPRAGLLTVNTEAQQL 250


>gi|193090146|gb|ACF15248.1| forkhead box J1 [Danio rerio]
          Length = 458

 Score = 73.2 bits (178), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 37/61 (60%), Positives = 41/61 (67%), Gaps = 5/61 (8%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE-GGGRYRNVRRKSSDI----QH 58
           NSIRHNLSLNKCF+KVPR KD+PGKGGFWK+D Q  E    G Y+  R     I    QH
Sbjct: 188 NSIRHNLSLNKCFIKVPRQKDEPGKGGFWKIDPQYAERLLNGAYKKRRLPPVQINPALQH 247

Query: 59  R 59
           R
Sbjct: 248 R 248


>gi|431908751|gb|ELK12343.1| Forkhead box protein J1 [Pteropus alecto]
          Length = 418

 Score = 72.8 bits (177), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 39/84 (46%), Positives = 47/84 (55%), Gaps = 4/84 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE-GGGRYRNVRRKSSDIQ---HR 59
           NSIRHNLSLNKCF+KVPR KD+PGKGGFW++D Q  E    G ++  R     I     R
Sbjct: 164 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRRLPQVHIHPAFAR 223

Query: 60  KQAHRPKPAPSENLNTAYTNNNSI 83
           + A  P  AP     T  T    +
Sbjct: 224 QAAQEPSAAPWAGPLTVNTEAQQL 247


>gi|16758686|ref|NP_446284.1| forkhead box protein J1 [Rattus norvegicus]
 gi|2494506|sp|Q63247.1|FOXJ1_RAT RecName: Full=Forkhead box protein J1; AltName: Full=Hepatocyte
           nuclear factor 3 forkhead homolog 4; Short=HFH-4
 gi|577499|gb|AAC37671.1| bp 399..701 forkhead domain; putative [Rattus norvegicus]
 gi|1096882|prf||2112356A hepatocyte nuclear factor
          Length = 421

 Score = 72.4 bits (176), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 37/70 (52%), Positives = 44/70 (62%), Gaps = 4/70 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE-GGGRYRNVRRKSSDIQ---HR 59
           NSIRHNLSLNKCF+KVPR KD+PGKGGFW++D Q  E    G ++  R     I     R
Sbjct: 167 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRRLPPVHIHPAFAR 226

Query: 60  KQAHRPKPAP 69
           + A  P  AP
Sbjct: 227 QAAQEPSTAP 236


>gi|149054848|gb|EDM06665.1| forkhead box J1 [Rattus norvegicus]
          Length = 421

 Score = 72.4 bits (176), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 37/70 (52%), Positives = 44/70 (62%), Gaps = 4/70 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE-GGGRYRNVRRKSSDIQ---HR 59
           NSIRHNLSLNKCF+KVPR KD+PGKGGFW++D Q  E    G ++  R     I     R
Sbjct: 167 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRRLPPVHIHPAFAR 226

Query: 60  KQAHRPKPAP 69
           + A  P  AP
Sbjct: 227 QAAQEPSTAP 236


>gi|328698695|ref|XP_003240706.1| PREDICTED: forkhead box protein J2-like isoform 1 [Acyrthosiphon
           pisum]
 gi|328698697|ref|XP_003240707.1| PREDICTED: forkhead box protein J2-like isoform 2 [Acyrthosiphon
           pisum]
          Length = 310

 Score = 72.0 bits (175), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 32/40 (80%), Positives = 34/40 (85%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEGG 43
           NSIRHNLSLNK FVKVPRSKD+PGKGGFWK D+  LE G 
Sbjct: 130 NSIRHNLSLNKFFVKVPRSKDEPGKGGFWKFDVDCLEGGA 169


>gi|260824405|ref|XP_002607158.1| hypothetical protein BRAFLDRAFT_118651 [Branchiostoma floridae]
 gi|190576669|gb|ACE79142.1| winged helix/forkhead transcription factor FoxJ1 [Branchiostoma
           floridae]
 gi|190576673|gb|ACE79144.1| winged helix/forkhead transcription factor FoxJ1 [Branchiostoma
           floridae]
 gi|229292504|gb|EEN63168.1| hypothetical protein BRAFLDRAFT_118651 [Branchiostoma floridae]
          Length = 440

 Score = 72.0 bits (175), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 34/61 (55%), Positives = 41/61 (67%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEGGGRYRNVRRKSSDIQHRKQAH 63
           NSIRHNLSLNKCF KVPRSK++PGKGGFWK+D Q  +         RR SS ++    A 
Sbjct: 186 NSIRHNLSLNKCFTKVPRSKNEPGKGGFWKIDPQHADMIVNGTLKKRRPSSTLESYPPAK 245

Query: 64  R 64
           +
Sbjct: 246 K 246


>gi|160333299|ref|NP_001070174.2| forkhead box protein J1 [Danio rerio]
 gi|158906080|gb|ABW82682.1| forkhead box transcription factor protein J1 [Danio rerio]
          Length = 458

 Score = 72.0 bits (175), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 30/37 (81%), Positives = 33/37 (89%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLE 40
           NSIRHNLSLNKCF+KVPR KD+PGKGGFWK+D Q  E
Sbjct: 188 NSIRHNLSLNKCFIKVPRQKDEPGKGGFWKIDPQYAE 224


>gi|47217992|emb|CAG02275.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 395

 Score = 71.6 bits (174), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 33/48 (68%), Positives = 37/48 (77%), Gaps = 1/48 (2%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE-GGGRYRNVR 50
           NSIRHNLSLNKCF+KVPR KD+PGKGGFWK+D Q  E    G Y+  R
Sbjct: 139 NSIRHNLSLNKCFIKVPRQKDEPGKGGFWKIDPQYAERLLSGTYKKRR 186


>gi|410895821|ref|XP_003961398.1| PREDICTED: forkhead box protein J1-like [Takifugu rubripes]
          Length = 467

 Score = 71.6 bits (174), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 43/119 (36%), Positives = 60/119 (50%), Gaps = 3/119 (2%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSSDIQHRKQA 62
           NSIRHNLSLNKCF KVPR KD+PGKGGFW++D Q  +    G ++  RR+ S  Q+    
Sbjct: 197 NSIRHNLSLNKCFKKVPRQKDEPGKGGFWQIDPQYADMFVNGIFK--RRRMSSNQYSSST 254

Query: 63  HRPKPAPSENLNTAYTNNNSIAPGENLNKLEDKLDDTLMESEISMTDDIDEDLILSNIL 121
           +RP                 ++  +N  K     D  L+  E    D +  D  L+++ 
Sbjct: 255 NRPSNLAGSPYQPQGCKRKHLSHTKNHVKATRMTDSPLLAREAHKADILKGDFDLASVF 313


>gi|410925928|ref|XP_003976431.1| PREDICTED: forkhead box protein J1-like [Takifugu rubripes]
          Length = 470

 Score = 71.6 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 40/73 (54%), Positives = 49/73 (67%), Gaps = 6/73 (8%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE-GGGRYRNVR----RKSSDIQH 58
           NSIRHNLSLNKCF+KVPR KD+PGKGGFWK+D Q  E    G Y+  R    R +  +Q+
Sbjct: 184 NSIRHNLSLNKCFIKVPRQKDEPGKGGFWKIDPQYAERLLSGTYKKRRMPPVRLTPALQN 243

Query: 59  RKQAH-RPKPAPS 70
           R  A  +P+ A S
Sbjct: 244 RVGASLQPQAAGS 256


>gi|426346856|ref|XP_004041086.1| PREDICTED: forkhead box protein J1 [Gorilla gorilla gorilla]
          Length = 421

 Score = 71.6 bits (174), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/84 (45%), Positives = 46/84 (54%), Gaps = 4/84 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE-GGGRYRNVRRKSSDIQ---HR 59
           NSIRHNLSLNKCF+KVPR KD+PGKGGFW++D Q  E    G ++  R     I     R
Sbjct: 167 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRRLPPVHIHPAFAR 226

Query: 60  KQAHRPKPAPSENLNTAYTNNNSI 83
           + A  P   P     T  T    +
Sbjct: 227 QAAQEPSAVPRAGPLTVNTEAQQL 250


>gi|1568641|gb|AAB09039.1| forkhead transcription factor HFH-4 [Homo sapiens]
          Length = 421

 Score = 71.6 bits (174), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/84 (45%), Positives = 46/84 (54%), Gaps = 4/84 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE-GGGRYRNVRRKSSDIQ---HR 59
           NSIRHNLSLNKCF+KVPR KD+PGKGGFW++D Q  E    G ++  R     I     R
Sbjct: 167 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRRLPPVHIHPAFAR 226

Query: 60  KQAHRPKPAPSENLNTAYTNNNSI 83
           + A  P   P     T  T    +
Sbjct: 227 QAAQEPSAVPRAGPLTVNTEAQQL 250


>gi|403280514|ref|XP_003931762.1| PREDICTED: forkhead box protein J1 [Saimiri boliviensis
           boliviensis]
          Length = 421

 Score = 71.6 bits (174), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/84 (45%), Positives = 46/84 (54%), Gaps = 4/84 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE-GGGRYRNVRRKSSDIQ---HR 59
           NSIRHNLSLNKCF+KVPR KD+PGKGGFW++D Q  E    G ++  R     I     R
Sbjct: 167 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRRLPPVHIHPAFAR 226

Query: 60  KQAHRPKPAPSENLNTAYTNNNSI 83
           + A  P   P     T  T    +
Sbjct: 227 QAAQEPSAVPQARPLTVNTEAQQL 250


>gi|440895209|gb|ELR47470.1| Forkhead box protein J1, partial [Bos grunniens mutus]
          Length = 320

 Score = 71.6 bits (174), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/70 (51%), Positives = 43/70 (61%), Gaps = 4/70 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE-GGGRYRNVRRKSSDIQ---HR 59
           NSIRHNLSLNKCF+KVPR KD+PGKGGFW++D Q  E    G ++  R     I     R
Sbjct: 66  NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRRLPPVHIHPAFAR 125

Query: 60  KQAHRPKPAP 69
           +    P  AP
Sbjct: 126 QAVQEPSAAP 135


>gi|426239247|ref|XP_004013537.1| PREDICTED: forkhead box protein J1 [Ovis aries]
          Length = 406

 Score = 71.6 bits (174), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/70 (52%), Positives = 44/70 (62%), Gaps = 4/70 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE-GGGRYRNVRRKSSDIQ---HR 59
           NSIRHNLSLNKCF+KVPR KD+PGKGGFW++D Q  E    G ++  R     I     R
Sbjct: 196 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRRLPPVHIHPAFAR 255

Query: 60  KQAHRPKPAP 69
           + A  P  AP
Sbjct: 256 QAAQEPSAAP 265


>gi|1922310|emb|CAA67729.1| fork head homologue 4 [Homo sapiens]
 gi|1922315|emb|CAA67730.1| unnamed protein product [Homo sapiens]
          Length = 419

 Score = 71.6 bits (174), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/84 (45%), Positives = 46/84 (54%), Gaps = 4/84 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE-GGGRYRNVRRKSSDIQ---HR 59
           NSIRHNLSLNKCF+KVPR KD+PGKGGFW++D Q  E    G ++  R     I     R
Sbjct: 166 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRRLPPVHIHPAFAR 225

Query: 60  KQAHRPKPAPSENLNTAYTNNNSI 83
           + A  P   P     T  T    +
Sbjct: 226 QAAQEPSAVPRAGPLTVNTEAQQL 249


>gi|50301236|ref|NP_001445.2| forkhead box protein J1 [Homo sapiens]
 gi|12644465|sp|Q92949.3|FOXJ1_HUMAN RecName: Full=Forkhead box protein J1; AltName:
           Full=Forkhead-related protein FKHL13; AltName:
           Full=Hepatocyte nuclear factor 3 forkhead homolog 4;
           Short=HFH-4
 gi|7161177|emb|CAB76562.1| forkhead transcription factor HFH-4 [Homo sapiens]
 gi|28277045|gb|AAH46460.1| Forkhead box J1 [Homo sapiens]
 gi|119609781|gb|EAW89375.1| forkhead box J1, isoform CRA_a [Homo sapiens]
 gi|119609782|gb|EAW89376.1| forkhead box J1, isoform CRA_a [Homo sapiens]
 gi|208966294|dbj|BAG73161.1| forkhead box J1 [synthetic construct]
 gi|208968413|dbj|BAG74045.1| forkhead box J1 [synthetic construct]
          Length = 421

 Score = 71.6 bits (174), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/84 (45%), Positives = 46/84 (54%), Gaps = 4/84 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE-GGGRYRNVRRKSSDIQ---HR 59
           NSIRHNLSLNKCF+KVPR KD+PGKGGFW++D Q  E    G ++  R     I     R
Sbjct: 167 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRRLPPVHIHPAFAR 226

Query: 60  KQAHRPKPAPSENLNTAYTNNNSI 83
           + A  P   P     T  T    +
Sbjct: 227 QAAQEPSAVPRAGPLTVNTEAQQL 250


>gi|348510163|ref|XP_003442615.1| PREDICTED: forkhead box protein J1-like [Oreochromis niloticus]
          Length = 459

 Score = 71.6 bits (174), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 30/37 (81%), Positives = 33/37 (89%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLE 40
           NSIRHNLSLNKCF+KVPR KD+PGKGGFWK+D Q  E
Sbjct: 186 NSIRHNLSLNKCFIKVPRQKDEPGKGGFWKIDPQYAE 222


>gi|115313226|gb|AAI24229.1| Forkhead box J1a [Danio rerio]
 gi|197247009|gb|AAI64538.1| Foxj1a protein [Danio rerio]
          Length = 458

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/61 (59%), Positives = 41/61 (67%), Gaps = 5/61 (8%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE-GGGRYRNVRRKSSDI----QH 58
           +SIRHNLSLNKCF+KVPR KD+PGKGGFWK+D Q  E    G Y+  R     I    QH
Sbjct: 188 SSIRHNLSLNKCFIKVPRQKDEPGKGGFWKIDPQYAERLLNGAYKKRRLPPVQINPALQH 247

Query: 59  R 59
           R
Sbjct: 248 R 248


>gi|300797101|ref|NP_001179005.1| forkhead box protein J1 [Bos taurus]
 gi|296476016|tpg|DAA18131.1| TPA: forkhead box protein J1-like [Bos taurus]
          Length = 421

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/70 (51%), Positives = 43/70 (61%), Gaps = 4/70 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE-GGGRYRNVRRKSSDIQ---HR 59
           NSIRHNLSLNKCF+KVPR KD+PGKGGFW++D Q  E    G ++  R     I     R
Sbjct: 167 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRRLPPVHIHPAFAR 226

Query: 60  KQAHRPKPAP 69
           +    P  AP
Sbjct: 227 QAVQEPSAAP 236


>gi|301769031|ref|XP_002919910.1| PREDICTED: forkhead box protein J1-like [Ailuropoda melanoleuca]
 gi|281350052|gb|EFB25636.1| hypothetical protein PANDA_008596 [Ailuropoda melanoleuca]
          Length = 421

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/70 (51%), Positives = 44/70 (62%), Gaps = 4/70 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE-GGGRYRNVRRKSSDIQ---HR 59
           NSIRHNLSLNKCF+KVPR KD+PGKGGFW++D Q  E    G ++  R     I     R
Sbjct: 167 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRRLPPVHIHPAFAR 226

Query: 60  KQAHRPKPAP 69
           + +  P  AP
Sbjct: 227 QASQEPSAAP 236


>gi|238054025|ref|NP_001153933.1| forkhead box J1 [Oryzias latipes]
 gi|226441738|gb|ACO57471.1| forkhead box J1 [Oryzias latipes]
          Length = 429

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 30/37 (81%), Positives = 33/37 (89%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLE 40
           NSIRHNLSLNKCF+KVPR KD+PGKGGFWK+D Q  E
Sbjct: 152 NSIRHNLSLNKCFIKVPRQKDEPGKGGFWKIDPQYAE 188


>gi|335297321|ref|XP_003358007.1| PREDICTED: forkhead box protein J1 [Sus scrofa]
          Length = 421

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/69 (52%), Positives = 44/69 (63%), Gaps = 4/69 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE-GGGRYRNVRRKSSDIQ---HR 59
           NSIRHNLSLNKCF+KVPR KD+PGKGGFW++D Q  E    G ++  R     I     R
Sbjct: 167 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRRLPPVHIHPAFAR 226

Query: 60  KQAHRPKPA 68
           + A  P+ A
Sbjct: 227 QAAQEPRAA 235


>gi|297701836|ref|XP_002827905.1| PREDICTED: forkhead box protein J1 [Pongo abelii]
          Length = 421

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/84 (45%), Positives = 46/84 (54%), Gaps = 4/84 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE-GGGRYRNVRRKSSDIQ---HR 59
           NSIRHNLSLNKCF+KVPR KD+PGKGGFW++D Q  E    G ++  R     I     R
Sbjct: 167 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRRLPPVHIHPAFAR 226

Query: 60  KQAHRPKPAPSENLNTAYTNNNSI 83
           + A  P   P     T  T    +
Sbjct: 227 QAAQEPSTVPRAGPLTVNTEAQQL 250


>gi|296203249|ref|XP_002806918.1| PREDICTED: LOW QUALITY PROTEIN: forkhead box protein J1 [Callithrix
           jacchus]
          Length = 421

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/84 (45%), Positives = 46/84 (54%), Gaps = 4/84 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE-GGGRYRNVRRKSSDIQ---HR 59
           NSIRHNLSLNKCF+KVPR KD+PGKGGFW++D Q  E    G ++  R     I     R
Sbjct: 167 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRRLPPVHIHPAFAR 226

Query: 60  KQAHRPKPAPSENLNTAYTNNNSI 83
           + A  P   P     T  T    +
Sbjct: 227 QAAQEPSTVPQARPLTVNTEAQQL 250


>gi|351696497|gb|EHA99415.1| Forkhead box protein J1 [Heterocephalus glaber]
          Length = 422

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/67 (52%), Positives = 43/67 (64%), Gaps = 4/67 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE-GGGRYRNVRRKSSDIQ---HR 59
           NSIRHNLSLNKCF+KVPR KD+PGKGGFW++D Q  E    G ++  R     I     R
Sbjct: 167 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRRLPQVHIHPAFAR 226

Query: 60  KQAHRPK 66
           + A  P+
Sbjct: 227 QAAQEPR 233


>gi|410981742|ref|XP_003997225.1| PREDICTED: forkhead box protein J1 [Felis catus]
          Length = 417

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/84 (45%), Positives = 47/84 (55%), Gaps = 4/84 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE-GGGRYRNVRRKSSDIQ---HR 59
           NSIRHNLSLNKCF+KVPR KD+PGKGGFW++D Q  E    G ++  R     I     R
Sbjct: 167 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRRLPPVHIHPAFAR 226

Query: 60  KQAHRPKPAPSENLNTAYTNNNSI 83
           + +  P  AP     T  T    +
Sbjct: 227 QASQEPGAAPWAGPLTVNTEAQQL 250


>gi|226693376|ref|NP_032266.3| forkhead box protein J1 [Mus musculus]
 gi|341940707|sp|Q61660.2|FOXJ1_MOUSE RecName: Full=Forkhead box protein J1; AltName:
           Full=Forkhead-related protein FKHL13; AltName:
           Full=Hepatocyte nuclear factor 3 forkhead homolog 4;
           Short=HFH-4
 gi|74183821|dbj|BAE24495.1| unnamed protein product [Mus musculus]
 gi|148702625|gb|EDL34572.1| forkhead box J1 [Mus musculus]
          Length = 421

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/70 (51%), Positives = 44/70 (62%), Gaps = 4/70 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE-GGGRYRNVRRKSSDIQ---HR 59
           NSIRHNLSLNKCF+KVPR KD+PGKGGFW++D Q  E    G ++  R     I     R
Sbjct: 167 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRRLPPVHIHPAFAR 226

Query: 60  KQAHRPKPAP 69
           + +  P  AP
Sbjct: 227 QASQEPSAAP 236


>gi|550488|gb|AAA21689.1| forkhead Box j1 [Mus musculus]
          Length = 421

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/70 (51%), Positives = 44/70 (62%), Gaps = 4/70 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE-GGGRYRNVRRKSSDIQ---HR 59
           NSIRHNLSLNKCF+KVPR KD+PGKGGFW++D Q  E    G ++  R     I     R
Sbjct: 167 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRRLPPVHIHPAFAR 226

Query: 60  KQAHRPKPAP 69
           + +  P  AP
Sbjct: 227 QASQEPSAAP 236


>gi|52139045|gb|AAH82543.1| Forkhead box J1 [Mus musculus]
          Length = 421

 Score = 70.9 bits (172), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/70 (51%), Positives = 44/70 (62%), Gaps = 4/70 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE-GGGRYRNVRRKSSDIQ---HR 59
           NSIRHNLSLNKCF+KVPR KD+PGKGGFW++D Q  E    G ++  R     I     R
Sbjct: 167 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRRLPPVHIHPAFAR 226

Query: 60  KQAHRPKPAP 69
           + +  P  AP
Sbjct: 227 QASQEPSAAP 236


>gi|397484260|ref|XP_003813295.1| PREDICTED: LOW QUALITY PROTEIN: forkhead box protein J1 [Pan
           paniscus]
          Length = 421

 Score = 70.9 bits (172), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/70 (51%), Positives = 43/70 (61%), Gaps = 4/70 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE-GGGRYRNVRRKSSDIQ---HR 59
           NSIRHNLSLNKCF+KVPR KD+PGKGGFW++D Q  E    G ++  R     I     R
Sbjct: 167 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRRLPPVHIHPAFAR 226

Query: 60  KQAHRPKPAP 69
           + A  P   P
Sbjct: 227 QAAQEPSAVP 236


>gi|344291136|ref|XP_003417292.1| PREDICTED: forkhead box protein J1 [Loxodonta africana]
          Length = 418

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 29/37 (78%), Positives = 33/37 (89%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLE 40
           NSIRHNLSLNKCF+KVPR KD+PGKGGFW++D Q  E
Sbjct: 167 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAE 203


>gi|114670611|ref|XP_511694.2| PREDICTED: forkhead box protein J1 [Pan troglodytes]
          Length = 421

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/70 (51%), Positives = 43/70 (61%), Gaps = 4/70 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE-GGGRYRNVRRKSSDIQ---HR 59
           NSIRHNLSLNKCF+KVPR KD+PGKGGFW++D Q  E    G ++  R     I     R
Sbjct: 167 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRRLPPVHIHPAFAR 226

Query: 60  KQAHRPKPAP 69
           + A  P   P
Sbjct: 227 QAAQEPSAVP 236


>gi|348551332|ref|XP_003461484.1| PREDICTED: forkhead box protein J1-like [Cavia porcellus]
          Length = 422

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/67 (52%), Positives = 43/67 (64%), Gaps = 4/67 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE-GGGRYRNVRRKSSDIQ---HR 59
           NSIRHNLSLNKCF+KVPR KD+PGKGGFW++D Q  E    G ++  R     I     R
Sbjct: 167 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRRLPPVHIHPAFAR 226

Query: 60  KQAHRPK 66
           + A  P+
Sbjct: 227 QAAQEPR 233


>gi|73965003|ref|XP_533124.2| PREDICTED: forkhead box protein J1 [Canis lupus familiaris]
          Length = 422

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 29/37 (78%), Positives = 33/37 (89%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLE 40
           NSIRHNLSLNKCF+KVPR KD+PGKGGFW++D Q  E
Sbjct: 167 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAE 203


>gi|291413429|ref|XP_002722969.1| PREDICTED: forkhead box J1 [Oryctolagus cuniculus]
          Length = 421

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/70 (51%), Positives = 44/70 (62%), Gaps = 4/70 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE-GGGRYRNVRRKSSDIQ---HR 59
           NSIRHNLSLNKCF+KVPR KD+PGKGGFW++D Q  E    G ++  R     I     R
Sbjct: 167 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRRLPPVHIHPAFAR 226

Query: 60  KQAHRPKPAP 69
           + +  P  AP
Sbjct: 227 QASQEPGAAP 236


>gi|443429378|gb|AGC92663.1| forkhead box protein J1-B-like protein [Heliconius erato]
          Length = 355

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/120 (41%), Positives = 64/120 (53%), Gaps = 9/120 (7%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEGGGRYRNVRRKSSDIQHRKQAH 63
           NSIRHNLSLNK FVKV RSK +PGKGGFWKLDL  L EG  R  N         H+K+ +
Sbjct: 205 NSIRHNLSLNKVFVKVARSKQEPGKGGFWKLDLAHL-EGTKRISNRT-------HKKKKN 256

Query: 64  RPKPAPSENLNTAYTNNNSIAPGENLNKLEDKLDDTLMESEISMTDDID-EDLILSNILL 122
            PK  P  +       N       +LN++   +   L E  +    DID E  I +N+++
Sbjct: 257 IPKIDPKISEEKIAVANIPQVHSIDLNEINQAVTLHLPELNLQSLPDIDMETNIGANVIV 316


>gi|111073417|emb|CAJ20800.1| forkhead box protein J1 [Oryctolagus cuniculus]
          Length = 274

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/70 (51%), Positives = 44/70 (62%), Gaps = 4/70 (5%)

Query: 4  NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE-GGGRYRNVRRKSSDIQ---HR 59
          NSIRHNLSLNKCF+KVPR KD+PGKGGFW++D Q  E    G ++  R     I     R
Sbjct: 24 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRRLPPVHIHPAFAR 83

Query: 60 KQAHRPKPAP 69
          + +  P  AP
Sbjct: 84 QASQEPGAAP 93


>gi|194216622|ref|XP_001915666.1| PREDICTED: forkhead box protein J1 [Equus caballus]
          Length = 421

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 29/37 (78%), Positives = 33/37 (89%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLE 40
           NSIRHNLSLNKCF+KVPR KD+PGKGGFW++D Q  E
Sbjct: 167 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAE 203


>gi|126308410|ref|XP_001369080.1| PREDICTED: forkhead box protein J1 [Monodelphis domestica]
          Length = 418

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 29/37 (78%), Positives = 33/37 (89%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLE 40
           NSIRHNLSLNKCF+KVPR KD+PGKGGFW++D Q  E
Sbjct: 163 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAE 199


>gi|395533007|ref|XP_003768555.1| PREDICTED: uncharacterized protein LOC100915773 [Sarcophilus
           harrisii]
          Length = 574

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/37 (78%), Positives = 33/37 (89%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLE 40
           NSIRHNLSLNKCF+KVPR KD+PGKGGFW++D Q  E
Sbjct: 451 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAE 487


>gi|395825892|ref|XP_003786154.1| PREDICTED: forkhead box protein J1 [Otolemur garnettii]
          Length = 421

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 29/37 (78%), Positives = 33/37 (89%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLE 40
           NSIRHNLSLNKCF+KVPR KD+PGKGGFW++D Q  E
Sbjct: 167 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAE 203


>gi|354489441|ref|XP_003506871.1| PREDICTED: forkhead box protein J1 [Cricetulus griseus]
 gi|344248578|gb|EGW04682.1| Forkhead box protein J1 [Cricetulus griseus]
          Length = 421

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 29/37 (78%), Positives = 33/37 (89%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLE 40
           NSIRHNLSLNKCF+KVPR KD+PGKGGFW++D Q  E
Sbjct: 167 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAE 203


>gi|449283091|gb|EMC89794.1| Forkhead box protein J1, partial [Columba livia]
          Length = 434

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/81 (45%), Positives = 49/81 (60%), Gaps = 3/81 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQ---KLEEGGGRYRNVRRKSSDIQHRK 60
           NSIRHNLSLNKCF+KVPR K +PGKGGFWKLD +   +L+ G  + R +          K
Sbjct: 169 NSIRHNLSLNKCFIKVPREKGEPGKGGFWKLDPEYADRLKNGASKKRRMPSVQIHPAFTK 228

Query: 61  QAHRPKPAPSENLNTAYTNNN 81
           +A +     +    +A T+NN
Sbjct: 229 KAQQGSWCVTSPPASACTSNN 249


>gi|327264991|ref|XP_003217292.1| PREDICTED: forkhead box protein J1-B-like [Anolis carolinensis]
          Length = 447

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 32/49 (65%), Positives = 38/49 (77%), Gaps = 3/49 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQ---KLEEGGGRYRNV 49
           NSIRHNLSLNKCF+KVPR KD+PGKGGFWK+D Q   +L  G  + R +
Sbjct: 175 NSIRHNLSLNKCFIKVPREKDEPGKGGFWKIDPQYADRLMNGAFKKRRM 223


>gi|149637705|ref|XP_001508237.1| PREDICTED: forkhead box protein J1 [Ornithorhynchus anatinus]
          Length = 410

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 29/37 (78%), Positives = 33/37 (89%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLE 40
           NSIRHNLSLNKCF+KVPR KD+PGKGGFW++D Q  E
Sbjct: 157 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAE 193


>gi|147905183|ref|NP_001083644.1| forkhead box protein J1-B [Xenopus laevis]
 gi|82129534|sp|Q708W1.1|FXJ1B_XENLA RecName: Full=Forkhead box protein J1-B; Short=FoxJ1-B;
           Short=FoxJ1b; Short=xFoxJ1'
 gi|38566761|emb|CAE76651.1| forkhead box protein [Xenopus laevis]
 gi|213623392|gb|AAI69682.1| Forkhead box protein [Xenopus laevis]
 gi|213625038|gb|AAI69680.1| Forkhead box protein [Xenopus laevis]
          Length = 439

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 32/49 (65%), Positives = 38/49 (77%), Gaps = 3/49 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQ---KLEEGGGRYRNV 49
           NSIRHNLSLNKCF+KVPR KD+PGKGGFWK+D Q   +L  G  + R +
Sbjct: 170 NSIRHNLSLNKCFIKVPREKDEPGKGGFWKIDPQYADRLMNGAMKKRRL 218


>gi|241250761|ref|XP_002403371.1| forkhead domain-containing protein, putative [Ixodes scapularis]
 gi|215496483|gb|EEC06123.1| forkhead domain-containing protein, putative [Ixodes scapularis]
          Length = 448

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/32 (87%), Positives = 32/32 (100%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCF+KVPR+KD+PGKGGFW+LD
Sbjct: 166 NSIRHNLSLNKCFIKVPRTKDEPGKGGFWRLD 197


>gi|196007274|ref|XP_002113503.1| hypothetical protein TRIADDRAFT_57744 [Trichoplax adhaerens]
 gi|190583907|gb|EDV23977.1| hypothetical protein TRIADDRAFT_57744 [Trichoplax adhaerens]
          Length = 174

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 40/52 (76%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEGGGRYRNVRRKSSD 55
           NSIRHNLSLNKCF KVPRSK+ PGKG +W +D    ++ G R ++ +RKS+D
Sbjct: 111 NSIRHNLSLNKCFRKVPRSKEDPGKGSYWTIDADPQDDAGSRLKSRKRKSND 162


>gi|363740742|ref|XP_001233327.2| PREDICTED: forkhead box protein J1 [Gallus gallus]
          Length = 474

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 29/34 (85%), Positives = 32/34 (94%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQ 37
           NSIRHNLSLNKCF+KVPR KD+PGKGGFWK+D Q
Sbjct: 208 NSIRHNLSLNKCFIKVPREKDEPGKGGFWKIDPQ 241


>gi|355689094|gb|AER98716.1| forkhead box J1 [Mustela putorius furo]
          Length = 181

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 31/43 (72%), Positives = 36/43 (83%), Gaps = 3/43 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQ---KLEEGG 43
           NSIRHNLSLNKCF+KVPR KD+PGKGGFW++D Q   +L  GG
Sbjct: 138 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLVSGG 180


>gi|326930732|ref|XP_003211496.1| PREDICTED: forkhead box protein J1-like [Meleagris gallopavo]
          Length = 430

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 29/34 (85%), Positives = 32/34 (94%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQ 37
           NSIRHNLSLNKCF+KVPR KD+PGKGGFWK+D Q
Sbjct: 164 NSIRHNLSLNKCFIKVPREKDEPGKGGFWKIDPQ 197


>gi|17569837|ref|NP_508644.1| Protein FKH-2, isoform a [Caenorhabditis elegans]
 gi|351019389|emb|CCD62370.1| Protein FKH-2, isoform a [Caenorhabditis elegans]
          Length = 270

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 38/73 (52%), Positives = 46/73 (63%), Gaps = 3/73 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE---GGGRYRNVRRKSSDIQHRK 60
           NSIRHNLSLNKCFVKVPR+ D PGKG +W LD    +E   GG   +  RR SS  + R 
Sbjct: 139 NSIRHNLSLNKCFVKVPRNFDDPGKGNYWMLDATAEDEVFIGGATGKLRRRPSSLSRARM 198

Query: 61  QAHRPKPAPSENL 73
            A++   A + NL
Sbjct: 199 DAYKQYGAAAANL 211


>gi|89267832|emb|CAJ82756.1| forkhead box J1 [Xenopus (Silurana) tropicalis]
          Length = 427

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 29/34 (85%), Positives = 32/34 (94%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQ 37
           NSIRHNLSLNKCF+KVPR KD+PGKGGFWK+D Q
Sbjct: 158 NSIRHNLSLNKCFIKVPREKDEPGKGGFWKIDPQ 191


>gi|115502201|sp|Q5M7N6.2|FOXJ1_XENTR RecName: Full=Forkhead box protein J1; Short=FoxJ1
          Length = 438

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 29/34 (85%), Positives = 32/34 (94%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQ 37
           NSIRHNLSLNKCF+KVPR KD+PGKGGFWK+D Q
Sbjct: 169 NSIRHNLSLNKCFIKVPREKDEPGKGGFWKIDPQ 202


>gi|58332586|ref|NP_001011367.1| forkhead box protein J1 [Xenopus (Silurana) tropicalis]
 gi|56789645|gb|AAH88533.1| forkhead box J1 [Xenopus (Silurana) tropicalis]
          Length = 427

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 29/34 (85%), Positives = 32/34 (94%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQ 37
           NSIRHNLSLNKCF+KVPR KD+PGKGGFWK+D Q
Sbjct: 158 NSIRHNLSLNKCFIKVPREKDEPGKGGFWKIDPQ 191


>gi|355754397|gb|EHH58362.1| hypothetical protein EGM_08193 [Macaca fascicularis]
          Length = 453

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 38/79 (48%), Positives = 45/79 (56%), Gaps = 4/79 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE-GGGRYRNVRRKSSDIQHR--- 59
           NSIRHNLSLNKCF+KVPR KD+PGKGGFW++D Q  E    G ++  R     I      
Sbjct: 199 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRRLPPVHIHPAFAL 258

Query: 60  KQAHRPKPAPSENLNTAYT 78
           + A  P   P   L T  T
Sbjct: 259 QAAQEPSAVPRAGLLTVNT 277


>gi|432113353|gb|ELK35765.1| Forkhead box protein J1 [Myotis davidii]
          Length = 208

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 29/37 (78%), Positives = 33/37 (89%)

Query: 4  NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLE 40
          NSIRHNLSLNKCF+KVPR KD+PGKGGFW++D Q  E
Sbjct: 36 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAE 72


>gi|391334573|ref|XP_003741677.1| PREDICTED: forkhead box protein J1-like [Metaseiulus occidentalis]
          Length = 447

 Score = 69.7 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 32/54 (59%), Positives = 40/54 (74%), Gaps = 3/54 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVRRKSS 54
           NSIRHNLSLNKCF+K+PR KD+PGKGGFWKLD   +  + +G  + R V   +S
Sbjct: 122 NSIRHNLSLNKCFIKIPRQKDEPGKGGFWKLDPNYVNHMVDGSFKKRKVTSNTS 175


>gi|50416260|gb|AAH77846.1| FoxJ1 protein [Xenopus laevis]
          Length = 428

 Score = 69.3 bits (168), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 29/34 (85%), Positives = 32/34 (94%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQ 37
           NSIRHNLSLNKCF+KVPR KD+PGKGGFWK+D Q
Sbjct: 159 NSIRHNLSLNKCFMKVPREKDEPGKGGFWKIDPQ 192


>gi|148233368|ref|NP_001083646.1| forkhead box protein J1-A [Xenopus laevis]
 gi|82129535|sp|Q708W2.1|FXJ1A_XENLA RecName: Full=Forkhead box protein J1-A; Short=FoxJ1-A;
           Short=FoxJ1a; Short=xFoxJ1; AltName: Full=Forkhead
           protein 5; Short=xFKH5
 gi|38566759|emb|CAE76650.1| forkhead box protein [Xenopus laevis]
          Length = 439

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 29/34 (85%), Positives = 32/34 (94%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQ 37
           NSIRHNLSLNKCF+KVPR KD+PGKGGFWK+D Q
Sbjct: 170 NSIRHNLSLNKCFMKVPREKDEPGKGGFWKIDPQ 203


>gi|56693369|ref|NP_001008648.1| forkhead box J1b [Danio rerio]
 gi|56269306|gb|AAH86726.1| Forkhead box J1b [Danio rerio]
 gi|182889918|gb|AAI65812.1| Foxj1b protein [Danio rerio]
          Length = 442

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 31/60 (51%), Positives = 44/60 (73%), Gaps = 1/60 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSSDIQHRKQA 62
           NSIRHNLSLNKCF+KVPR KD+PGKGGFW++D Q  +    G ++  R  +++   ++Q+
Sbjct: 185 NSIRHNLSLNKCFMKVPRQKDEPGKGGFWQIDPQYADMFVNGVFKRRRMPATNFNTQRQS 244


>gi|321465421|gb|EFX76422.1| hypothetical protein DAPPUDRAFT_8603 [Daphnia pulex]
          Length = 95

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 28/32 (87%), Positives = 32/32 (100%)

Query: 4  NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
          NSIRHNLSLNKCF+K+PRSKD+PGKGGFW+LD
Sbjct: 48 NSIRHNLSLNKCFIKIPRSKDEPGKGGFWRLD 79


>gi|444301785|gb|AGD98929.1| FoxJ1 [Nematostella vectensis]
          Length = 411

 Score = 69.3 bits (168), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 28/32 (87%), Positives = 31/32 (96%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCFVKVPR KD+PGKGGFW++D
Sbjct: 148 NSIRHNLSLNKCFVKVPRKKDEPGKGGFWRID 179


>gi|410519368|gb|AFV73346.1| forkhead box protein J1 [Placozoa sp. H4]
          Length = 518

 Score = 69.3 bits (168), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 28/32 (87%), Positives = 30/32 (93%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCF KVPR KD+PGKGGFWK+D
Sbjct: 158 NSIRHNLSLNKCFAKVPRKKDEPGKGGFWKID 189


>gi|259013265|ref|NP_001158438.1| forkhead box J1 [Saccoglossus kowalevskii]
 gi|197734661|gb|ACH73226.1| forkhead box J protein [Saccoglossus kowalevskii]
          Length = 450

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 34/54 (62%), Positives = 39/54 (72%), Gaps = 3/54 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVRRKSS 54
           NSIRHNLSLNKCF KVPR KD+PGKGGFWK+D      LE G  + R   R++S
Sbjct: 174 NSIRHNLSLNKCFTKVPRRKDEPGKGGFWKIDPAHADVLENGIFKKRRGGRENS 227


>gi|402591392|gb|EJW85321.1| hypothetical protein WUBG_03767 [Wuchereria bancrofti]
          Length = 301

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 40/86 (46%), Positives = 50/86 (58%), Gaps = 4/86 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE---GGGRYRNVRRKSSDIQHRK 60
           NSIRHNLSLNKCFVKVPRS D PGKG +W LD    +E   GG   +  RR S+  + R 
Sbjct: 105 NSIRHNLSLNKCFVKVPRSYDDPGKGNYWMLDASCEDEVFIGGSTGKLRRRPSATTRARL 164

Query: 61  QAHRPKPAPSENL-NTAYTNNNSIAP 85
            A +   A + +L N  Y   + + P
Sbjct: 165 DAFKQYGAVASSLFNPFYQQGSRLPP 190


>gi|341874528|gb|EGT30463.1| hypothetical protein CAEBREN_06289 [Caenorhabditis brenneri]
          Length = 277

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 37/73 (50%), Positives = 46/73 (63%), Gaps = 3/73 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE---GGGRYRNVRRKSSDIQHRK 60
           NSIRHNLSLNKCFVKVPR+ D PGKG +W LD    +E   GG   +  RR S+  + R 
Sbjct: 146 NSIRHNLSLNKCFVKVPRNFDDPGKGNYWMLDATCEDEVFIGGATGKLRRRPSTLSRARM 205

Query: 61  QAHRPKPAPSENL 73
            A++   A + NL
Sbjct: 206 DAYKQYGAAAANL 218


>gi|308511633|ref|XP_003117999.1| CRE-FKH-2 protein [Caenorhabditis remanei]
 gi|308238645|gb|EFO82597.1| CRE-FKH-2 protein [Caenorhabditis remanei]
          Length = 278

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 37/73 (50%), Positives = 46/73 (63%), Gaps = 3/73 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE---GGGRYRNVRRKSSDIQHRK 60
           NSIRHNLSLNKCFVKVPR+ D PGKG +W LD    +E   GG   +  RR S+  + R 
Sbjct: 146 NSIRHNLSLNKCFVKVPRNFDDPGKGNYWMLDATCEDEVFIGGATGKLRRRPSTLSRARM 205

Query: 61  QAHRPKPAPSENL 73
            A++   A + NL
Sbjct: 206 DAYKQYGAAAANL 218


>gi|312069618|ref|XP_003137766.1| hypothetical protein LOAG_02180 [Loa loa]
 gi|307767074|gb|EFO26308.1| hypothetical protein LOAG_02180 [Loa loa]
          Length = 303

 Score = 68.6 bits (166), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 40/86 (46%), Positives = 50/86 (58%), Gaps = 4/86 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE---GGGRYRNVRRKSSDIQHRK 60
           NSIRHNLSLNKCFVKVPRS D PGKG +W LD    +E   GG   +  RR S+  + R 
Sbjct: 107 NSIRHNLSLNKCFVKVPRSYDDPGKGNYWMLDASCEDEVFIGGSTGKLRRRPSATTRARF 166

Query: 61  QAHRPKPAPSENL-NTAYTNNNSIAP 85
            A +   A + +L N  Y   + + P
Sbjct: 167 DAFKQYGAVASSLFNPFYQQGSRLPP 192


>gi|268578883|ref|XP_002644424.1| C. briggsae CBR-FKH-2 protein [Caenorhabditis briggsae]
          Length = 279

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 37/73 (50%), Positives = 46/73 (63%), Gaps = 3/73 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE---GGGRYRNVRRKSSDIQHRK 60
           NSIRHNLSLNKCFVKVPR+ D PGKG +W LD    +E   GG   +  RR S+  + R 
Sbjct: 147 NSIRHNLSLNKCFVKVPRNFDDPGKGNYWMLDATCEDEVFIGGATGKLRRRPSTLSRARM 206

Query: 61  QAHRPKPAPSENL 73
            A++   A + NL
Sbjct: 207 DAYKQYGAAAANL 219


>gi|156395079|ref|XP_001636939.1| predicted protein [Nematostella vectensis]
 gi|156224047|gb|EDO44876.1| predicted protein [Nematostella vectensis]
          Length = 94

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 28/32 (87%), Positives = 31/32 (96%)

Query: 4  NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
          NSIRHNLSLNKCFVKVPR KD+PGKGGFW++D
Sbjct: 47 NSIRHNLSLNKCFVKVPRKKDEPGKGGFWRID 78


>gi|17569835|ref|NP_508645.1| Protein FKH-2, isoform b [Caenorhabditis elegans]
 gi|351019390|emb|CCD62371.1| Protein FKH-2, isoform b [Caenorhabditis elegans]
          Length = 168

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/78 (48%), Positives = 48/78 (61%), Gaps = 3/78 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE---GGGRYRNVRRKSSDIQHRK 60
           NSIRHNLSLNKCFVKVPR+ D PGKG +W LD    +E   GG   +  RR SS  + R 
Sbjct: 37  NSIRHNLSLNKCFVKVPRNFDDPGKGNYWMLDATAEDEVFIGGATGKLRRRPSSLSRARM 96

Query: 61  QAHRPKPAPSENLNTAYT 78
            A++   A + NL   ++
Sbjct: 97  DAYKQYGAAAANLFPYFS 114


>gi|241998174|ref|XP_002433730.1| fork head domain protein, putative [Ixodes scapularis]
 gi|215495489|gb|EEC05130.1| fork head domain protein, putative [Ixodes scapularis]
          Length = 253

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/118 (38%), Positives = 61/118 (51%), Gaps = 24/118 (20%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEGGGRYRNVRRK---SSDIQHRK 60
           NSIRHNLSLNKCF KVPRSKD PGKG +W+LDL+   E   R + ++     S  ++   
Sbjct: 84  NSIRHNLSLNKCFHKVPRSKDDPGKGSYWELDLKSGNELPCRKKKLKSYEAWSGQLESPA 143

Query: 61  QAHRPKPAPSENLNTAYTNNNSIAPGENL------------NKLEDKLDD---TLMES 103
             H P P      +T +T     +P E L            +++ D  D+   T+MES
Sbjct: 144 FPHSPAP------STTWTPEGHPSPQEALPEQQVLPSEDDRSRVSDSYDEPVKTIMES 195


>gi|193605824|ref|XP_001942631.1| PREDICTED: hypothetical protein LOC100164522 [Acyrthosiphon pisum]
          Length = 395

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/71 (49%), Positives = 46/71 (64%), Gaps = 2/71 (2%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSSDIQHRKQA 62
           NSIRHNLSLNKCFVK+PRS D PGKG +W +D    +   GG    +RR+S+     + A
Sbjct: 192 NSIRHNLSLNKCFVKIPRSFDDPGKGNYWMIDPNSSDVYIGGTTGKLRRRSTQSSRHRIA 251

Query: 63  HRPKPAPSENL 73
           +RP P P  ++
Sbjct: 252 YRP-PMPPHSV 261


>gi|324520915|gb|ADY47743.1| Fork head domain transcription factor slp2 [Ascaris suum]
          Length = 276

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/64 (56%), Positives = 41/64 (64%), Gaps = 3/64 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE---GGGRYRNVRRKSSDIQHRK 60
           NSIRHNLSLNKCFVKVPRS D PGKG +W LD    +E   GG   +  RR SS  + R 
Sbjct: 104 NSIRHNLSLNKCFVKVPRSYDDPGKGNYWMLDASCEDEVFIGGSTGKLRRRPSSAARARL 163

Query: 61  QAHR 64
            A +
Sbjct: 164 DAFK 167


>gi|332248492|ref|XP_003273396.1| PREDICTED: forkhead box protein J3 isoform 1 [Nomascus leucogenys]
          Length = 622

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/56 (57%), Positives = 38/56 (67%), Gaps = 5/56 (8%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-----GGRYRNVRRKSS 54
           NSIRHNLSLNKCF+KVPRSKD PGKG +W +D    E+        R R+V R S+
Sbjct: 124 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDALPTRPKKRARSVERAST 179


>gi|388452414|ref|NP_001253925.1| forkhead box protein J3 [Macaca mulatta]
 gi|355557889|gb|EHH14669.1| hypothetical protein EGK_00634 [Macaca mulatta]
 gi|380785469|gb|AFE64610.1| forkhead box protein J3 isoform 1 [Macaca mulatta]
 gi|383414089|gb|AFH30258.1| forkhead box protein J3 isoform 1 [Macaca mulatta]
 gi|384941780|gb|AFI34495.1| forkhead box protein J3 isoform 1 [Macaca mulatta]
          Length = 622

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/56 (57%), Positives = 38/56 (67%), Gaps = 5/56 (8%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-----GGRYRNVRRKSS 54
           NSIRHNLSLNKCF+KVPRSKD PGKG +W +D    E+        R R+V R S+
Sbjct: 124 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDALPTRPKKRARSVERAST 179


>gi|156230158|gb|AAI52442.1| FOXJ3 protein [Homo sapiens]
 gi|208967825|dbj|BAG72558.1| forkhead box J3 [synthetic construct]
          Length = 622

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/56 (57%), Positives = 38/56 (67%), Gaps = 5/56 (8%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-----GGRYRNVRRKSS 54
           NSIRHNLSLNKCF+KVPRSKD PGKG +W +D    E+        R R+V R S+
Sbjct: 124 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDALPTRPKKRARSVERAST 179


>gi|403291975|ref|XP_003937035.1| PREDICTED: forkhead box protein J3 isoform 3 [Saimiri boliviensis
           boliviensis]
          Length = 640

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/56 (57%), Positives = 38/56 (67%), Gaps = 5/56 (8%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-----GGRYRNVRRKSS 54
           NSIRHNLSLNKCF+KVPRSKD PGKG +W +D    E+        R R+V R S+
Sbjct: 142 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDALPTRPKKRARSVERAST 197


>gi|403291971|ref|XP_003937033.1| PREDICTED: forkhead box protein J3 isoform 1 [Saimiri boliviensis
           boliviensis]
 gi|403291973|ref|XP_003937034.1| PREDICTED: forkhead box protein J3 isoform 2 [Saimiri boliviensis
           boliviensis]
          Length = 622

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/56 (57%), Positives = 38/56 (67%), Gaps = 5/56 (8%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-----GGRYRNVRRKSS 54
           NSIRHNLSLNKCF+KVPRSKD PGKG +W +D    E+        R R+V R S+
Sbjct: 124 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDALPTRPKKRARSVERAST 179


>gi|397483477|ref|XP_003812929.1| PREDICTED: forkhead box protein J3 isoform 1 [Pan paniscus]
 gi|397483479|ref|XP_003812930.1| PREDICTED: forkhead box protein J3 isoform 2 [Pan paniscus]
          Length = 620

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/56 (57%), Positives = 38/56 (67%), Gaps = 5/56 (8%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-----GGRYRNVRRKSS 54
           NSIRHNLSLNKCF+KVPRSKD PGKG +W +D    E+        R R+V R S+
Sbjct: 124 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDALPTRPKKRARSVERAST 179


>gi|156230782|gb|AAI51829.1| Forkhead box J3 [Homo sapiens]
 gi|410225234|gb|JAA09836.1| forkhead box J3 [Pan troglodytes]
 gi|410260578|gb|JAA18255.1| forkhead box J3 [Pan troglodytes]
 gi|410260580|gb|JAA18256.1| forkhead box J3 [Pan troglodytes]
 gi|410260582|gb|JAA18257.1| forkhead box J3 [Pan troglodytes]
 gi|410260584|gb|JAA18258.1| forkhead box J3 [Pan troglodytes]
 gi|410306172|gb|JAA31686.1| forkhead box J3 [Pan troglodytes]
 gi|410336049|gb|JAA36971.1| forkhead box J3 [Pan troglodytes]
          Length = 622

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/56 (57%), Positives = 38/56 (67%), Gaps = 5/56 (8%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-----GGRYRNVRRKSS 54
           NSIRHNLSLNKCF+KVPRSKD PGKG +W +D    E+        R R+V R S+
Sbjct: 124 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDALPTRPKKRARSVERAST 179


>gi|355689106|gb|AER98720.1| forkhead box J3 [Mustela putorius furo]
          Length = 500

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/56 (57%), Positives = 38/56 (67%), Gaps = 5/56 (8%)

Query: 4  NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-----GGRYRNVRRKSS 54
          NSIRHNLSLNKCF+KVPRSKD PGKG +W +D    E+        R R+V R S+
Sbjct: 2  NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDALPTRPKKRARSVERAST 57


>gi|351696382|gb|EHA99300.1| Forkhead box protein J3 [Heterocephalus glaber]
          Length = 607

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/56 (57%), Positives = 38/56 (67%), Gaps = 5/56 (8%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-----GGRYRNVRRKSS 54
           NSIRHNLSLNKCF+KVPRSKD PGKG +W +D    E+        R R+V R S+
Sbjct: 109 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDALPTRPKKRARSVERAST 164


>gi|440911635|gb|ELR61280.1| Forkhead box protein J3, partial [Bos grunniens mutus]
          Length = 616

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/56 (57%), Positives = 38/56 (67%), Gaps = 5/56 (8%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-----GGRYRNVRRKSS 54
           NSIRHNLSLNKCF+KVPRSKD PGKG +W +D    E+        R R+V R S+
Sbjct: 115 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDALPTRPKKRARSVERAST 170


>gi|359064291|ref|XP_003585960.1| PREDICTED: forkhead box protein J3 [Bos taurus]
          Length = 625

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/56 (57%), Positives = 38/56 (67%), Gaps = 5/56 (8%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-----GGRYRNVRRKSS 54
           NSIRHNLSLNKCF+KVPRSKD PGKG +W +D    E+        R R+V R S+
Sbjct: 124 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDALPTRPKKRARSVERAST 179


>gi|390465803|ref|XP_002750738.2| PREDICTED: forkhead box protein J3 isoform 2, partial [Callithrix
           jacchus]
          Length = 633

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/56 (57%), Positives = 38/56 (67%), Gaps = 5/56 (8%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-----GGRYRNVRRKSS 54
           NSIRHNLSLNKCF+KVPRSKD PGKG +W +D    E+        R R+V R S+
Sbjct: 135 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDALPTRPKKRARSVERAST 190


>gi|358411603|ref|XP_003582070.1| PREDICTED: LOW QUALITY PROTEIN: forkhead box protein J3 [Bos
           taurus]
          Length = 625

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/56 (57%), Positives = 38/56 (67%), Gaps = 5/56 (8%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-----GGRYRNVRRKSS 54
           NSIRHNLSLNKCF+KVPRSKD PGKG +W +D    E+        R R+V R S+
Sbjct: 124 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDALPTRPKKRARSVERAST 179


>gi|432104497|gb|ELK31115.1| Forkhead box protein J3 [Myotis davidii]
          Length = 679

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/56 (57%), Positives = 38/56 (67%), Gaps = 5/56 (8%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-----GGRYRNVRRKSS 54
           NSIRHNLSLNKCF+KVPRSKD PGKG +W +D    E+        R R+V R S+
Sbjct: 165 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDALPTRPKKRARSVERAST 220


>gi|40789027|dbj|BAA82993.2| KIAA1041 protein [Homo sapiens]
          Length = 642

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/56 (57%), Positives = 38/56 (67%), Gaps = 5/56 (8%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-----GGRYRNVRRKSS 54
           NSIRHNLSLNKCF+KVPRSKD PGKG +W +D    E+        R R+V R S+
Sbjct: 144 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDALPTRPKKRARSVERAST 199


>gi|338721917|ref|XP_001503206.3| PREDICTED: forkhead box protein J3 [Equus caballus]
          Length = 623

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/56 (57%), Positives = 38/56 (67%), Gaps = 5/56 (8%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-----GGRYRNVRRKSS 54
           NSIRHNLSLNKCF+KVPRSKD PGKG +W +D    E+        R R+V R S+
Sbjct: 124 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDALPTRPKKRARSVERAST 179


>gi|410032813|ref|XP_001172907.2| PREDICTED: forkhead box protein J3 isoform 3 [Pan troglodytes]
          Length = 647

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/56 (57%), Positives = 38/56 (67%), Gaps = 5/56 (8%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-----GGRYRNVRRKSS 54
           NSIRHNLSLNKCF+KVPRSKD PGKG +W +D    E+        R R+V R S+
Sbjct: 149 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDALPTRPKKRARSVERAST 204


>gi|56118526|ref|NP_001008143.1| forkhead box protein J1.2 [Xenopus (Silurana) tropicalis]
 gi|82181175|sp|Q66IG8.1|FXJ12_XENTR RecName: Full=Forkhead box protein J1.2; Short=FoxJ1.2
 gi|51704179|gb|AAH81355.1| forkhead box J1, gene 2 [Xenopus (Silurana) tropicalis]
          Length = 371

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 27/32 (84%), Positives = 31/32 (96%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCF+KVPR KD+PGKGGFW++D
Sbjct: 155 NSIRHNLSLNKCFMKVPRGKDEPGKGGFWQMD 186


>gi|395730675|ref|XP_002811012.2| PREDICTED: forkhead box protein J3 [Pongo abelii]
          Length = 646

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/56 (57%), Positives = 38/56 (67%), Gaps = 5/56 (8%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-----GGRYRNVRRKSS 54
           NSIRHNLSLNKCF+KVPRSKD PGKG +W +D    E+        R R+V R S+
Sbjct: 148 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDALPTRPKKRARSVERAST 203


>gi|118601046|ref|NP_001073013.1| forkhead transcription factor J1 [Strongylocentrotus purpuratus]
 gi|82706192|gb|ABB89480.1| forkhead transcription factor J1 [Strongylocentrotus purpuratus]
          Length = 468

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 31/51 (60%), Positives = 36/51 (70%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEGGGRYRNVRRKSS 54
           NSIRHNLSLNKCF KVPR KD+PGKGGFW++D    +E        RR +S
Sbjct: 195 NSIRHNLSLNKCFQKVPRKKDEPGKGGFWRIDPAHADELENGVFKKRRHAS 245


>gi|402854173|ref|XP_003891750.1| PREDICTED: forkhead box protein J3 [Papio anubis]
          Length = 663

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/56 (57%), Positives = 38/56 (67%), Gaps = 5/56 (8%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-----GGRYRNVRRKSS 54
           NSIRHNLSLNKCF+KVPRSKD PGKG +W +D    E+        R R+V R S+
Sbjct: 165 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDALPTRPKKRARSVERAST 220


>gi|281342204|gb|EFB17788.1| hypothetical protein PANDA_017238 [Ailuropoda melanoleuca]
          Length = 577

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/56 (57%), Positives = 38/56 (67%), Gaps = 5/56 (8%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-----GGRYRNVRRKSS 54
           NSIRHNLSLNKCF+KVPRSKD PGKG +W +D    E+        R R+V R S+
Sbjct: 115 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDALPTRPKKRARSVERAST 170


>gi|410966986|ref|XP_003990005.1| PREDICTED: forkhead box protein J3 [Felis catus]
          Length = 622

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/56 (57%), Positives = 38/56 (67%), Gaps = 5/56 (8%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-----GGRYRNVRRKSS 54
           NSIRHNLSLNKCF+KVPRSKD PGKG +W +D    E+        R R+V R S+
Sbjct: 124 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDALPTRPKKRARSVERAST 179


>gi|344241009|gb|EGV97112.1| Forkhead box protein J3 [Cricetulus griseus]
          Length = 606

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/56 (57%), Positives = 38/56 (67%), Gaps = 5/56 (8%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE-----GGGRYRNVRRKSS 54
           NSIRHNLSLNKCF+KVPRSKD PGKG +W +D    E+        R R+V R S+
Sbjct: 109 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDTLPTRSKKRARSVERAST 164


>gi|426329218|ref|XP_004025639.1| PREDICTED: forkhead box protein J3, partial [Gorilla gorilla
           gorilla]
          Length = 569

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/56 (57%), Positives = 38/56 (67%), Gaps = 5/56 (8%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-----GGRYRNVRRKSS 54
           NSIRHNLSLNKCF+KVPRSKD PGKG +W +D    E+        R R+V R S+
Sbjct: 145 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDALPTRPKKRARSVERAST 200


>gi|291399146|ref|XP_002715759.1| PREDICTED: forkhead box J3 [Oryctolagus cuniculus]
          Length = 617

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/56 (57%), Positives = 38/56 (67%), Gaps = 5/56 (8%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-----GGRYRNVRRKSS 54
           NSIRHNLSLNKCF+KVPRSKD PGKG +W +D    E+        R R+V R S+
Sbjct: 174 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDALPTRPKKRARSVERAST 229


>gi|354479361|ref|XP_003501880.1| PREDICTED: forkhead box protein J3-like [Cricetulus griseus]
          Length = 613

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/56 (57%), Positives = 38/56 (67%), Gaps = 5/56 (8%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE-----GGGRYRNVRRKSS 54
           NSIRHNLSLNKCF+KVPRSKD PGKG +W +D    E+        R R+V R S+
Sbjct: 116 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDTLPTRSKKRARSVERAST 171


>gi|301784085|ref|XP_002927458.1| PREDICTED: forkhead box protein J3-like [Ailuropoda melanoleuca]
          Length = 639

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/56 (57%), Positives = 38/56 (67%), Gaps = 5/56 (8%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-----GGRYRNVRRKSS 54
           NSIRHNLSLNKCF+KVPRSKD PGKG +W +D    E+        R R+V R S+
Sbjct: 141 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDALPTRPKKRARSVERAST 196


>gi|148231700|ref|NP_001089890.1| forkhead box protein J1.2 [Xenopus laevis]
 gi|115502203|sp|Q32NH9.1|FXJ12_XENLA RecName: Full=Forkhead box protein J1.2; Short=FoxJ1.2
 gi|80476512|gb|AAI08617.1| MGC131191 protein [Xenopus laevis]
          Length = 370

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 27/32 (84%), Positives = 31/32 (96%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCF+KVPR KD+PGKGGFW++D
Sbjct: 154 NSIRHNLSLNKCFMKVPRGKDEPGKGGFWQMD 185


>gi|195999868|ref|XP_002109802.1| hypothetical protein TRIADDRAFT_17444 [Trichoplax adhaerens]
 gi|190587926|gb|EDV27968.1| hypothetical protein TRIADDRAFT_17444, partial [Trichoplax
          adhaerens]
          Length = 94

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 28/32 (87%), Positives = 30/32 (93%)

Query: 4  NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
          NSIRHNLSLNKCF KVPR KD+PGKGGFWK+D
Sbjct: 47 NSIRHNLSLNKCFTKVPRKKDEPGKGGFWKID 78


>gi|426215282|ref|XP_004001903.1| PREDICTED: forkhead box protein J3 [Ovis aries]
          Length = 625

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/56 (57%), Positives = 38/56 (67%), Gaps = 5/56 (8%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-----GGRYRNVRRKSS 54
           NSIRHNLSLNKCF+KVPRSKD PGKG +W +D    E+        R R+V R S+
Sbjct: 124 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDSLPTRPKKRARSVERAST 179


>gi|348521676|ref|XP_003448352.1| PREDICTED: forkhead box protein J3 isoform 1 [Oreochromis
           niloticus]
          Length = 604

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/93 (40%), Positives = 52/93 (55%), Gaps = 5/93 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEGGGRYRNVRRKSSDIQHRKQAH 63
           NSIRHNLSLNKCF+KVPRSKD PGKG +W +D    E+        R +S +     +A 
Sbjct: 108 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDALPTRPKKRPRSGE-----RAS 162

Query: 64  RPKPAPSENLNTAYTNNNSIAPGENLNKLEDKL 96
            P    SE+L      + S +P   +N + +K+
Sbjct: 163 TPYSLESESLGMECMISGSASPTLAINTVTNKV 195


>gi|317419182|emb|CBN81219.1| Forkhead box protein J1-A [Dicentrarchus labrax]
          Length = 490

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 28/34 (82%), Positives = 31/34 (91%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQ 37
           NSIRHNLSLNKCF KVPR KD+PGKGGFW++D Q
Sbjct: 197 NSIRHNLSLNKCFKKVPRQKDEPGKGGFWQIDPQ 230


>gi|348502407|ref|XP_003438759.1| PREDICTED: forkhead box protein J1-A-like [Oreochromis niloticus]
          Length = 499

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 28/34 (82%), Positives = 31/34 (91%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQ 37
           NSIRHNLSLNKCF KVPR KD+PGKGGFW++D Q
Sbjct: 198 NSIRHNLSLNKCFKKVPRQKDEPGKGGFWQIDPQ 231


>gi|431922575|gb|ELK19518.1| Forkhead box protein J3 [Pteropus alecto]
          Length = 642

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/56 (57%), Positives = 38/56 (67%), Gaps = 5/56 (8%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-----GGRYRNVRRKSS 54
           NSIRHNLSLNKCF+KVPRSKD PGKG +W +D    E+        R R+V R S+
Sbjct: 176 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDTLPTRPKKRARSVERAST 231


>gi|403260875|ref|XP_003922876.1| PREDICTED: forkhead box protein L1 [Saimiri boliviensis
           boliviensis]
          Length = 345

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/64 (53%), Positives = 41/64 (64%), Gaps = 1/64 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE-GGGRYRNVRRKSSDIQHRKQA 62
           NSIRHNLSLN CFVKVPR K +PGKG +W LD + L+    G YR  +RK        +A
Sbjct: 95  NSIRHNLSLNDCFVKVPREKGRPGKGSYWTLDPRCLDMFENGNYRRRKRKPKPAPGAPEA 154

Query: 63  HRPK 66
            RP+
Sbjct: 155 KRPR 158


>gi|296231744|ref|XP_002761283.1| PREDICTED: forkhead box protein L1 [Callithrix jacchus]
          Length = 344

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/64 (53%), Positives = 41/64 (64%), Gaps = 1/64 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE-GGGRYRNVRRKSSDIQHRKQA 62
           NSIRHNLSLN CFVKVPR K +PGKG +W LD + L+    G YR  +RK        +A
Sbjct: 94  NSIRHNLSLNDCFVKVPREKGRPGKGSYWTLDPRCLDMFENGNYRRRKRKPKPAPGAPEA 153

Query: 63  HRPK 66
            RP+
Sbjct: 154 KRPR 157


>gi|345326365|ref|XP_001505781.2| PREDICTED: forkhead box protein J3-like [Ornithorhynchus anatinus]
          Length = 733

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/56 (57%), Positives = 38/56 (67%), Gaps = 5/56 (8%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-----GGRYRNVRRKSS 54
           NSIRHNLSLNKCF+KVPRSKD PGKG +W +D    E+        R R+V R S+
Sbjct: 233 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDALPTRPKKRARSVERAST 288


>gi|148698488|gb|EDL30435.1| forkhead box J3 [Mus musculus]
          Length = 623

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 32/56 (57%), Positives = 38/56 (67%), Gaps = 5/56 (8%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-----GGRYRNVRRKSS 54
           NSIRHNLSLNKCF+KVPRSKD PGKG +W +D    E+        R R+V R S+
Sbjct: 124 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDTLPTRPKKRARSVERAST 179


>gi|157818473|ref|NP_001101441.1| forkhead box protein J3 [Rattus norvegicus]
 gi|149035427|gb|EDL90108.1| forkhead box J3 (predicted) [Rattus norvegicus]
          Length = 622

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 32/56 (57%), Positives = 38/56 (67%), Gaps = 5/56 (8%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-----GGRYRNVRRKSS 54
           NSIRHNLSLNKCF+KVPRSKD PGKG +W +D    E+        R R+V R S+
Sbjct: 124 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDTLPTRPKKRARSVERAST 179


>gi|27370018|ref|NP_766287.1| forkhead box protein J3 [Mus musculus]
 gi|47605695|sp|Q8BUR3.1|FOXJ3_MOUSE RecName: Full=Forkhead box protein J3
 gi|26350017|dbj|BAC38648.1| unnamed protein product [Mus musculus]
 gi|34849679|gb|AAH58231.1| Forkhead box J3 [Mus musculus]
 gi|74228407|dbj|BAE24042.1| unnamed protein product [Mus musculus]
          Length = 623

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 32/56 (57%), Positives = 38/56 (67%), Gaps = 5/56 (8%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-----GGRYRNVRRKSS 54
           NSIRHNLSLNKCF+KVPRSKD PGKG +W +D    E+        R R+V R S+
Sbjct: 124 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDTLPTRPKKRARSVERAST 179


>gi|50345831|ref|NP_055762.3| forkhead box protein J3 isoform 1 [Homo sapiens]
 gi|311893303|ref|NP_001185779.1| forkhead box protein J3 isoform 1 [Homo sapiens]
 gi|311893305|ref|NP_001185780.1| forkhead box protein J3 isoform 1 [Homo sapiens]
 gi|296434510|sp|Q9UPW0.2|FOXJ3_HUMAN RecName: Full=Forkhead box protein J3
 gi|119627567|gb|EAX07162.1| forkhead box J3, isoform CRA_a [Homo sapiens]
 gi|119627568|gb|EAX07163.1| forkhead box J3, isoform CRA_a [Homo sapiens]
 gi|119627569|gb|EAX07164.1| forkhead box J3, isoform CRA_a [Homo sapiens]
 gi|119627570|gb|EAX07165.1| forkhead box J3, isoform CRA_a [Homo sapiens]
 gi|182888139|gb|AAI60166.1| Forkhead box J3 [synthetic construct]
          Length = 622

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 32/56 (57%), Positives = 38/56 (67%), Gaps = 5/56 (8%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE-----GGGRYRNVRRKSS 54
           NSIRHNLSLNKCF+KVPRSKD PGKG +W +D    E+        R R+V R S+
Sbjct: 124 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDVLPTRPKKRARSVERAST 179


>gi|120952618|ref|NP_032050.2| forkhead box protein L1 [Mus musculus]
 gi|408360106|sp|Q64731.2|FOXL1_MOUSE RecName: Full=Forkhead box protein L1; AltName:
           Full=Forkhead-related protein FKHL11; AltName:
           Full=Transcription factor FKH-6
 gi|148679707|gb|EDL11654.1| forkhead box L1 [Mus musculus]
 gi|187950795|gb|AAI37807.1| Forkhead box L1 [Mus musculus]
 gi|187952719|gb|AAI37806.1| Forkhead box L1 [Mus musculus]
          Length = 336

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/70 (50%), Positives = 44/70 (62%), Gaps = 1/70 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSSDIQHRKQA 62
           NSIRHNLSLN+CFVKVPR K +PGKG +W LD + L+    G YR  +RK        +A
Sbjct: 95  NSIRHNLSLNECFVKVPREKGRPGKGSYWTLDPRCLDMFENGNYRRRKRKPKPAAGSPEA 154

Query: 63  HRPKPAPSEN 72
            R +  P E+
Sbjct: 155 KRTRVEPPES 164


>gi|432921842|ref|XP_004080249.1| PREDICTED: forkhead box protein J1-A-like [Oryzias latipes]
          Length = 269

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/130 (33%), Positives = 62/130 (47%), Gaps = 8/130 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEGGGRYRNVRRKSSDIQHRKQAH 63
           NSIRHNLSLNKCF KVPR KD+PGKGGFW++D Q  +         RR S++     Q H
Sbjct: 12  NSIRHNLSLNKCFKKVPRQKDEPGKGGFWQIDPQYADMFVNGIFKRRRMSANHYSSPQRH 71

Query: 64  RPKPAPSENLNTAYTNNNS----IAP-GENLNKLEDKLDDTLMESEISMTDDIDEDLILS 118
                P +  +  Y         + P  + L   +  L  T   +   ++ D D   +  
Sbjct: 72  S---KPVQGYHCPYQAMGGKRKDLPPKSKTLRATQSPLLATEANTADILSGDFDLASVFD 128

Query: 119 NILLSGDSYW 128
           ++L  G S +
Sbjct: 129 DVLGGGCSTF 138


>gi|417411978|gb|JAA52406.1| Putative forkhead/hnf-3-related transcription factor, partial
           [Desmodus rotundus]
          Length = 621

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 32/56 (57%), Positives = 38/56 (67%), Gaps = 5/56 (8%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE-----GGGRYRNVRRKSS 54
           NSIRHNLSLNKCF+KVPRSKD PGKG +W +D    E+        R R+V R S+
Sbjct: 123 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDVLPTRPKKRARSVERAST 178


>gi|354465370|ref|XP_003495153.1| PREDICTED: forkhead box protein L1-like [Cricetulus griseus]
 gi|344237998|gb|EGV94101.1| Forkhead box protein L1 [Cricetulus griseus]
          Length = 334

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/69 (50%), Positives = 43/69 (62%), Gaps = 1/69 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSSDIQHRKQA 62
           NSIRHNLSLN+CFVKVPR K +PGKG +W LD + L+    G YR  +RK        +A
Sbjct: 93  NSIRHNLSLNECFVKVPREKGRPGKGSYWTLDPRCLDMFENGNYRRRKRKPKPAAGSPEA 152

Query: 63  HRPKPAPSE 71
            R +  P E
Sbjct: 153 KRTRAEPPE 161


>gi|426383154|ref|XP_004058153.1| PREDICTED: forkhead box protein L1 [Gorilla gorilla gorilla]
          Length = 345

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 34/64 (53%), Positives = 41/64 (64%), Gaps = 1/64 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE-GGGRYRNVRRKSSDIQHRKQA 62
           NSIRHNLSLN CFVKVPR K +PGKG +W LD + L+    G YR  +RK        +A
Sbjct: 95  NSIRHNLSLNDCFVKVPREKGRPGKGSYWTLDPRCLDMFENGNYRRRKRKPKPGPGAPEA 154

Query: 63  HRPK 66
            RP+
Sbjct: 155 KRPR 158


>gi|410297080|gb|JAA27140.1| forkhead box L1 [Pan troglodytes]
          Length = 345

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 34/64 (53%), Positives = 41/64 (64%), Gaps = 1/64 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE-GGGRYRNVRRKSSDIQHRKQA 62
           NSIRHNLSLN CFVKVPR K +PGKG +W LD + L+    G YR  +RK        +A
Sbjct: 95  NSIRHNLSLNDCFVKVPREKGRPGKGSYWTLDPRCLDMFENGNYRRRKRKPKPGPGAPEA 154

Query: 63  HRPK 66
            RP+
Sbjct: 155 KRPR 158


>gi|410919949|ref|XP_003973446.1| PREDICTED: forkhead box protein J3-like [Takifugu rubripes]
          Length = 641

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 38/93 (40%), Positives = 52/93 (55%), Gaps = 5/93 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEGGGRYRNVRRKSSDIQHRKQAH 63
           NSIRHNLSLNKCF+KVPRSKD PGKG +W +D    E+        R +S +     +A 
Sbjct: 150 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDALPTRPKKRPRSGE-----RAS 204

Query: 64  RPKPAPSENLNTAYTNNNSIAPGENLNKLEDKL 96
            P    SE+L      + S +P   +N + +K+
Sbjct: 205 TPYSLESESLGMECMISGSASPTLAINTVTNKV 237


>gi|332246838|ref|XP_003272562.1| PREDICTED: forkhead box protein L1 [Nomascus leucogenys]
          Length = 344

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 34/64 (53%), Positives = 41/64 (64%), Gaps = 1/64 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE-GGGRYRNVRRKSSDIQHRKQA 62
           NSIRHNLSLN CFVKVPR K +PGKG +W LD + L+    G YR  +RK        +A
Sbjct: 95  NSIRHNLSLNDCFVKVPREKGRPGKGSYWTLDPRCLDMFENGNYRRRKRKPKPGPGAPEA 154

Query: 63  HRPK 66
            RP+
Sbjct: 155 KRPR 158


>gi|114663994|ref|XP_511154.2| PREDICTED: forkhead box protein L1 [Pan troglodytes]
          Length = 345

 Score = 66.6 bits (161), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 34/64 (53%), Positives = 41/64 (64%), Gaps = 1/64 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE-GGGRYRNVRRKSSDIQHRKQA 62
           NSIRHNLSLN CFVKVPR K +PGKG +W LD + L+    G YR  +RK        +A
Sbjct: 95  NSIRHNLSLNDCFVKVPREKGRPGKGSYWTLDPRCLDMFENGNYRRRKRKPKPGPGAPEA 154

Query: 63  HRPK 66
            RP+
Sbjct: 155 KRPR 158


>gi|33874209|gb|AAH14182.1| FOXJ3 protein, partial [Homo sapiens]
          Length = 382

 Score = 66.6 bits (161), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 31/53 (58%), Positives = 36/53 (67%), Gaps = 5/53 (9%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-----GGRYRNVRR 51
           NSIRHNLSLNKCF+KVPRSKD PGKG +W +D    E+        R R+V R
Sbjct: 124 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDALPTRPKKRARSVER 176


>gi|293343411|ref|XP_001079078.2| PREDICTED: forkhead box protein L1-like [Rattus norvegicus]
 gi|392355072|ref|XP_003751934.1| PREDICTED: forkhead box protein L1-like [Rattus norvegicus]
 gi|149038357|gb|EDL92717.1| rCG51404 [Rattus norvegicus]
          Length = 341

 Score = 66.6 bits (161), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 35/70 (50%), Positives = 44/70 (62%), Gaps = 1/70 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSSDIQHRKQA 62
           NSIRHNLSLN+CFVKVPR K +PGKG +W LD + L+    G YR  +RK        +A
Sbjct: 95  NSIRHNLSLNECFVKVPREKGRPGKGSYWTLDPRCLDMFENGNYRRRKRKPKPAAGSPEA 154

Query: 63  HRPKPAPSEN 72
            R +  P E+
Sbjct: 155 KRTRVEPRES 164


>gi|224063697|ref|XP_002194184.1| PREDICTED: forkhead box protein L1 [Taeniopygia guttata]
          Length = 246

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 40/90 (44%), Positives = 49/90 (54%), Gaps = 5/90 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVRRKSSDIQHRK 60
           NSIRHNLSLN CFVKVPR K +PGKG +W LD   L   E G  R R  + K++     K
Sbjct: 86  NSIRHNLSLNDCFVKVPREKGRPGKGSYWTLDPRCLDMFENGNYRRRKRKPKAAAAPDPK 145

Query: 61  QAHRPKPAPSENLNTAYTNNNSIAPGENLN 90
              +P P PS  +       ++ A G  LN
Sbjct: 146 SGEQPGP-PSRPVEPKRAKGSAGA-GAELN 173


>gi|47229824|emb|CAG07020.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 609

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 38/94 (40%), Positives = 53/94 (56%), Gaps = 5/94 (5%)

Query: 3   VNSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEGGGRYRNVRRKSSDIQHRKQA 62
           +NSIRHNLSLNKCF+KVPRSKD PGKG +W +D    E+        R +S +     +A
Sbjct: 43  LNSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDALPTRPKKRPRSGE-----RA 97

Query: 63  HRPKPAPSENLNTAYTNNNSIAPGENLNKLEDKL 96
             P    SE+L      + S +P   +N + +K+
Sbjct: 98  STPYSLESESLGMECMISGSASPTLAINTVTNKV 131


>gi|71681183|gb|AAI00028.1| Forkhead box L1 [Homo sapiens]
          Length = 345

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 34/64 (53%), Positives = 41/64 (64%), Gaps = 1/64 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE-GGGRYRNVRRKSSDIQHRKQA 62
           NSIRHNLSLN CFVKVPR K +PGKG +W LD + L+    G YR  +RK        +A
Sbjct: 95  NSIRHNLSLNDCFVKVPREKGRPGKGSYWTLDPRCLDMFENGNYRRRKRKPKPGPGAPEA 154

Query: 63  HRPK 66
            RP+
Sbjct: 155 KRPR 158


>gi|22779860|ref|NP_005241.1| forkhead box protein L1 [Homo sapiens]
 gi|13638268|sp|Q12952.2|FOXL1_HUMAN RecName: Full=Forkhead box protein L1; AltName:
           Full=Forkhead-related protein FKHL11; AltName:
           Full=Forkhead-related transcription factor 7;
           Short=FREAC-7
 gi|11762068|gb|AAG40312.1|AF315075_1 forkhead family transcription factor FOXL1 [Homo sapiens]
 gi|109658834|gb|AAI17227.1| Forkhead box L1 [Homo sapiens]
 gi|119615820|gb|EAW95414.1| forkhead box L1 [Homo sapiens]
 gi|208968415|dbj|BAG74046.1| forkhead box L1 [synthetic construct]
          Length = 345

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 34/64 (53%), Positives = 41/64 (64%), Gaps = 1/64 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE-GGGRYRNVRRKSSDIQHRKQA 62
           NSIRHNLSLN CFVKVPR K +PGKG +W LD + L+    G YR  +RK        +A
Sbjct: 95  NSIRHNLSLNDCFVKVPREKGRPGKGSYWTLDPRCLDMFENGNYRRRKRKPKPGPGAPEA 154

Query: 63  HRPK 66
            RP+
Sbjct: 155 KRPR 158


>gi|410225236|gb|JAA09837.1| forkhead box J3 [Pan troglodytes]
 gi|410260586|gb|JAA18259.1| forkhead box J3 [Pan troglodytes]
 gi|410306170|gb|JAA31685.1| forkhead box J3 [Pan troglodytes]
 gi|410336047|gb|JAA36970.1| forkhead box J3 [Pan troglodytes]
          Length = 588

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 31/53 (58%), Positives = 36/53 (67%), Gaps = 5/53 (9%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-----GGRYRNVRR 51
           NSIRHNLSLNKCF+KVPRSKD PGKG +W +D    E+        R R+V R
Sbjct: 124 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDALPTRPKKRARSVER 176


>gi|170588651|ref|XP_001899087.1| Forkhead transcription factor family protein 2, isoform b, putative
           [Brugia malayi]
 gi|158593300|gb|EDP31895.1| Forkhead transcription factor family protein 2, isoform b, putative
           [Brugia malayi]
          Length = 300

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/86 (45%), Positives = 48/86 (55%), Gaps = 4/86 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE---GGGRYRNVRRKSSDIQHRK 60
           NSIRHNLSLNKCFVKVPR+ D PGKG +W LD    +E   GG   +  RR SS  + R 
Sbjct: 106 NSIRHNLSLNKCFVKVPRNYDDPGKGNYWMLDASCEDEVFIGGSTGKLRRRPSSTTRARL 165

Query: 61  QAHRPKPAPSENL-NTAYTNNNSIAP 85
              +   A +  L N  Y   + + P
Sbjct: 166 DVFKQYGAVASTLFNPFYQQGSRLPP 191


>gi|1199830|emb|CAA63243.1| fkh-6 [Mus musculus]
          Length = 337

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 35/70 (50%), Positives = 44/70 (62%), Gaps = 1/70 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSSDIQHRKQA 62
           NSIRHNLSLN+CFVKVPR K +PGKG +W LD + L+    G YR  +RK        +A
Sbjct: 95  NSIRHNLSLNECFVKVPREKGRPGKGSYWTLDPRCLDMFENGNYRRRKRKPKPAAGSPEA 154

Query: 63  HRPKPAPSEN 72
            R +  P E+
Sbjct: 155 KRTRVEPPES 164


>gi|158518470|ref|NP_001103516.1| forkhead box J3 [Xenopus (Silurana) tropicalis]
 gi|157422824|gb|AAI53348.1| foxj3 protein [Xenopus (Silurana) tropicalis]
          Length = 603

 Score = 66.2 bits (160), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 38/93 (40%), Positives = 54/93 (58%), Gaps = 5/93 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEGGGRYRNVRRKSSDIQHRKQAH 63
           NSIRHNLSLNKCF+KVPRSKD PGKG +W +D    +E   + R  +R  S+    ++A 
Sbjct: 109 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNP-KEDAAQARPRKRPRSE----ERAS 163

Query: 64  RPKPAPSENLNTAYTNNNSIAPGENLNKLEDKL 96
            P    S++L        S +P   +N + +K+
Sbjct: 164 TPYSIDSDSLGMDCIIPGSASPNLAINTVTNKV 196


>gi|395748187|ref|XP_002826772.2| PREDICTED: LOW QUALITY PROTEIN: forkhead box protein L1 [Pongo
           abelii]
          Length = 336

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 34/64 (53%), Positives = 41/64 (64%), Gaps = 1/64 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE-GGGRYRNVRRKSSDIQHRKQA 62
           NSIRHNLSLN CFVKVPR K +PGKG +W LD + L+    G YR  +RK        +A
Sbjct: 95  NSIRHNLSLNDCFVKVPREKGRPGKGSYWTLDPRCLDMFENGNYRRRKRKPKPGPGAPEA 154

Query: 63  HRPK 66
            RP+
Sbjct: 155 KRPR 158


>gi|256052360|ref|XP_002569740.1| forkhead protein/ forkhead protein domain [Schistosoma mansoni]
 gi|360043898|emb|CCD81444.1| putative forkhead protein/ forkhead protein domain [Schistosoma
           mansoni]
          Length = 744

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 45/120 (37%), Positives = 63/120 (52%), Gaps = 12/120 (10%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRRKSSDI--QHR 59
           NSIRHNLSLN CFVKVPR   +PGKG FW L  +   + + G   R  RR  +D+    R
Sbjct: 364 NSIRHNLSLNDCFVKVPRDDTKPGKGSFWTLHPEAHNMFDNGSYLRRKRRFKTDLTSTER 423

Query: 60  KQAHRPKPAPSENLNTAYTNNNSIAPGENLNKLEDKLDDTLMESEISMTDDIDEDLILSN 119
             + + +    ENL       NSI      N   D L+D+   + +++T+ IDE  + +N
Sbjct: 424 YCSMKKRNFIEENL------MNSIKKNLLKNNCRDSLNDS--RTNLALTNGIDETNVNTN 475


>gi|397500515|ref|XP_003845987.1| PREDICTED: LOW QUALITY PROTEIN: forkhead box protein L1 [Pan
           paniscus]
          Length = 267

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 34/64 (53%), Positives = 41/64 (64%), Gaps = 1/64 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSSDIQHRKQA 62
           NSIRHNLSLN CFVKVPR K +PGKG +W LD + L+    G YR  +RK        +A
Sbjct: 95  NSIRHNLSLNDCFVKVPREKGRPGKGSYWTLDPRCLDMFENGNYRRRKRKPKPGPGXPEA 154

Query: 63  HRPK 66
            RP+
Sbjct: 155 KRPR 158


>gi|4885237|ref|NP_005242.1| forkhead box protein C2 [Homo sapiens]
 gi|3024149|sp|Q99958.1|FOXC2_HUMAN RecName: Full=Forkhead box protein C2; AltName:
           Full=Forkhead-related protein FKHL14; AltName:
           Full=Mesenchyme fork head protein 1; Short=MFH-1
           protein; AltName: Full=Transcription factor FKH-14
 gi|1869805|emb|CAA69400.1| Mesenchyme Fork Head-1 [Homo sapiens]
 gi|94963117|gb|AAI11590.1| FOXC2 protein [synthetic construct]
 gi|109731037|gb|AAI13440.1| Forkhead box C2 (MFH-1, mesenchyme forkhead 1) [Homo sapiens]
 gi|109731690|gb|AAI13438.1| Forkhead box C2 (MFH-1, mesenchyme forkhead 1) [Homo sapiens]
 gi|242129237|gb|ACS83751.1| forkhead box C2 (MFH-1, mesenchyme forkhead 1) [Homo sapiens]
          Length = 501

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 40/94 (42%), Positives = 51/94 (54%), Gaps = 5/94 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVRRKSSDIQHRK 60
           NSIRHNLSLN+CFVKVPR   +PGKG +W LD       E G    R  R K  D+   K
Sbjct: 118 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVSKEK 177

Query: 61  Q--AHRPKPAPSENLNTAYTNNNSIAPGENLNKL 92
           +  AH  +P P+ +     T + + AP E   K+
Sbjct: 178 EERAHLKEPPPAASKGAPATPHLADAPKEAEKKV 211


>gi|345780874|ref|XP_532540.3| PREDICTED: forkhead box protein J3 isoform 1 [Canis lupus
           familiaris]
          Length = 588

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 31/53 (58%), Positives = 36/53 (67%), Gaps = 5/53 (9%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-----GGRYRNVRR 51
           NSIRHNLSLNKCF+KVPRSKD PGKG +W +D    E+        R R+V R
Sbjct: 124 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDALPTRPKKRARSVER 176


>gi|410341437|gb|JAA39665.1| forkhead box C2 (MFH-1, mesenchyme forkhead 1) [Pan troglodytes]
          Length = 501

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 40/94 (42%), Positives = 51/94 (54%), Gaps = 5/94 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVRRKSSDIQHRK 60
           NSIRHNLSLN+CFVKVPR   +PGKG +W LD       E G    R  R K  D+   K
Sbjct: 118 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVSKEK 177

Query: 61  Q--AHRPKPAPSENLNTAYTNNNSIAPGENLNKL 92
           +  AH  +P P+ +     T + + AP E   K+
Sbjct: 178 EERAHLKEPPPAASKGAPATPHLADAPKEAEKKV 211


>gi|224075106|ref|XP_002189803.1| PREDICTED: forkhead box protein J1 [Taeniopygia guttata]
          Length = 432

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 28/32 (87%), Positives = 30/32 (93%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNK F+KVPR KD+PGKGGFWKLD
Sbjct: 167 NSIRHNLSLNKSFIKVPREKDEPGKGGFWKLD 198


>gi|410297078|gb|JAA27139.1| forkhead box C2 (MFH-1, mesenchyme forkhead 1) [Pan troglodytes]
          Length = 501

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 40/94 (42%), Positives = 51/94 (54%), Gaps = 5/94 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVRRKSSDIQHRK 60
           NSIRHNLSLN+CFVKVPR   +PGKG +W LD       E G    R  R K  D+   K
Sbjct: 118 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVSKEK 177

Query: 61  Q--AHRPKPAPSENLNTAYTNNNSIAPGENLNKL 92
           +  AH  +P P+ +     T + + AP E   K+
Sbjct: 178 EERAHLKEPPPAASKGAPATPHLADAPKEAEKKV 211


>gi|402909239|ref|XP_003917330.1| PREDICTED: forkhead box protein L1 [Papio anubis]
          Length = 283

 Score = 65.9 bits (159), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 34/64 (53%), Positives = 41/64 (64%), Gaps = 1/64 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSSDIQHRKQA 62
           NSIRHNLSLN CFVKVPR K +PGKG +W LD + L+    G YR  +RK        +A
Sbjct: 95  NSIRHNLSLNDCFVKVPREKGRPGKGSYWTLDPRCLDMFENGNYRRRKRKPKPGPGAPEA 154

Query: 63  HRPK 66
            RP+
Sbjct: 155 KRPR 158


>gi|395508445|ref|XP_003758522.1| PREDICTED: forkhead box protein L1 [Sarcophilus harrisii]
          Length = 325

 Score = 65.9 bits (159), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 42/104 (40%), Positives = 53/104 (50%), Gaps = 4/104 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSSDIQHRKQA 62
           NSIRHNLSLN CFVKVPR K +PGKG +W LD + L+    G YR  +RK       ++A
Sbjct: 95  NSIRHNLSLNDCFVKVPREKGRPGKGSYWTLDPRCLDMFEHGNYRRRKRKPKPGPGVQEA 154

Query: 63  HRPKPAPSENLNTAYTNNNSIAPGENLNKLEDKLDDTLMESEIS 106
            R K    +           ++PG      ED   D+L    IS
Sbjct: 155 KRGK---GDTEEAGGQVGRRVSPGLLSLASEDTAQDSLQRDAIS 195


>gi|47211273|emb|CAF96645.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 342

 Score = 65.9 bits (159), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 5/93 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEGGGRYRNVRRKSSDIQHRKQAH 63
           NSIRHNLSLNKCF+KVPRSKD PGKG +W +D    E+        R +S +     +A 
Sbjct: 121 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDTVPSRPKKRPRSGE-----RAS 175

Query: 64  RPKPAPSENLNTAYTNNNSIAPGENLNKLEDKL 96
            P    SE+L      +   +P   +N + +K+
Sbjct: 176 TPYSLESESLRVDCIMSGGASPTLAINAVTNKV 208


>gi|126330495|ref|XP_001381612.1| PREDICTED: forkhead box protein J3 [Monodelphis domestica]
          Length = 607

 Score = 65.9 bits (159), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 32/56 (57%), Positives = 38/56 (67%), Gaps = 5/56 (8%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-----GGRYRNVRRKSS 54
           NSIRHNLSLNKCF+KVPRSKD PGKG +W +D    E+        R R+V R S+
Sbjct: 109 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDNNPKEDTLPSRPKKRARSVERAST 164


>gi|328705759|ref|XP_003242897.1| PREDICTED: hypothetical protein LOC100165903 [Acyrthosiphon pisum]
          Length = 739

 Score = 65.9 bits (159), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 30/50 (60%), Positives = 38/50 (76%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDL---QKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D    QKL E   R R +R
Sbjct: 379 NSIRHNLSLNRYFIKVPRSQEEPGKGAFWRIDPSSEQKLIEQAFRRRRIR 428


>gi|410899633|ref|XP_003963301.1| PREDICTED: forkhead box protein J3-like [Takifugu rubripes]
          Length = 614

 Score = 65.9 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 5/93 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEGGGRYRNVRRKSSDIQHRKQAH 63
           NSIRHNLSLNKCF+KVPRSKD PGKG +W +D    E+        R +S +     +A 
Sbjct: 124 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDTVPSRPKKRPRSGE-----RAS 178

Query: 64  RPKPAPSENLNTAYTNNNSIAPGENLNKLEDKL 96
            P    SE+L      +   +P   +N + +K+
Sbjct: 179 TPYSMESESLRVDCIMSGGASPTLAINAVTNKV 211


>gi|256080634|ref|XP_002576584.1| forkhead protein/ forkhead protein domain [Schistosoma mansoni]
 gi|353229329|emb|CCD75500.1| putative forkhead protein/ forkhead protein domain [Schistosoma
           mansoni]
          Length = 504

 Score = 65.5 bits (158), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 32/59 (54%), Positives = 41/59 (69%), Gaps = 3/59 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG--GGRYRNVRRKSSDIQHRK 60
           NSIRHNLSLNKCFVKVPR+ D PGKG +W LD    E+   GG    +RR+++ +Q  +
Sbjct: 129 NSIRHNLSLNKCFVKVPRAYDDPGKGNYWMLD-PSCEDVYIGGTTGKLRRRTNSLQRSR 186


>gi|391337722|ref|XP_003743214.1| PREDICTED: uncharacterized protein LOC100897392 [Metaseiulus
           occidentalis]
          Length = 447

 Score = 65.5 bits (158), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 27/34 (79%), Positives = 31/34 (91%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQ 37
           NSIRHNLSLNKCF KVPRSKD PGKG +W+LD++
Sbjct: 244 NSIRHNLSLNKCFKKVPRSKDDPGKGSYWELDMR 277


>gi|88954261|gb|AAI14078.1| Forkhead box J3 [Bos taurus]
 gi|296488919|tpg|DAA31032.1| TPA: forkhead box J3 [Bos taurus]
          Length = 184

 Score = 65.5 bits (158), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 32/58 (55%), Positives = 38/58 (65%), Gaps = 5/58 (8%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-----GGRYRNVRRKSSDI 56
           NSIRHNLSLNKCF+KVPRSKD PGKG +W +D    E+        R R+V R  S +
Sbjct: 124 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDALPTRPKKRARSVERVKSSL 181


>gi|157120350|ref|XP_001653620.1| forkhead box protein (AaegFOXK1) [Aedes aegypti]
 gi|108875001|gb|EAT39226.1| AAEL008958-PA [Aedes aegypti]
 gi|148361435|gb|ABQ59299.1| forkhead box subgroup K1 [Aedes aegypti]
          Length = 692

 Score = 65.5 bits (158), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 37/80 (46%), Positives = 52/80 (65%), Gaps = 5/80 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD-LQKLEEGGGRYRNVRRKSSDIQHRKQA 62
           NSIRHNLSLN+ F+KVPRS+D+PGKG FW++D   +L+     YR  R++ S    R   
Sbjct: 533 NSIRHNLSLNRYFIKVPRSQDEPGKGSFWRIDPSSELKLIDQSYRKRRQRGSQC-FRTPF 591

Query: 63  HRPKPAPSENLNTAYTNNNS 82
             P+ AP   ++ +Y +NNS
Sbjct: 592 GMPRSAP---VSPSYMDNNS 608


>gi|47226110|emb|CAG04484.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 215

 Score = 65.5 bits (158), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 27/34 (79%), Positives = 31/34 (91%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQ 37
           NSIRHNLSLNKCF KVPR K++PGKGGFW++D Q
Sbjct: 168 NSIRHNLSLNKCFKKVPRQKNEPGKGGFWQIDPQ 201


>gi|189525242|ref|XP_001922273.1| PREDICTED: forkhead box protein J3-like [Danio rerio]
          Length = 592

 Score = 65.5 bits (158), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 38/93 (40%), Positives = 52/93 (55%), Gaps = 5/93 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEGGGRYRNVRRKSSDIQHRKQAH 63
           NSIRHNLSLNKCF+KVPRSKD PGKG +W +D    E+        R +S +     +A 
Sbjct: 108 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDTLPTRPKKRPRSGE-----RAS 162

Query: 64  RPKPAPSENLNTAYTNNNSIAPGENLNKLEDKL 96
            P    S+NL      + S +P   +N + +K+
Sbjct: 163 TPYSLESDNLGMDCIISGSASPTLAINTVTNKV 195


>gi|119615822|gb|EAW95416.1| forkhead box C2 (MFH-1, mesenchyme forkhead 1), isoform CRA_b [Homo
           sapiens]
          Length = 461

 Score = 65.5 bits (158), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 40/94 (42%), Positives = 51/94 (54%), Gaps = 5/94 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVRRKSSDIQHRK 60
           NSIRHNLSLN+CFVKVPR   +PGKG +W LD       E G    R  R K  D+   K
Sbjct: 118 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVSKEK 177

Query: 61  Q--AHRPKPAPSENLNTAYTNNNSIAPGENLNKL 92
           +  AH  +P P+ +     T + + AP E   K+
Sbjct: 178 EERAHLKEPPPAASKGAPATPHLADAPKEAEKKV 211


>gi|41055835|ref|NP_957278.1| forkhead box protein L1 [Danio rerio]
 gi|32766647|gb|AAH55156.1| Forkhead box L1 [Danio rerio]
          Length = 363

 Score = 65.5 bits (158), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 32/64 (50%), Positives = 40/64 (62%), Gaps = 3/64 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKL---EEGGGRYRNVRRKSSDIQHRK 60
           NSIRHNLSLN CF+KVPR K +PGKG +W LD + L   E G  R R  + ++ D    K
Sbjct: 98  NSIRHNLSLNDCFIKVPREKGRPGKGSYWTLDTKCLDMFENGNYRRRKRKCRTQDTGDTK 157

Query: 61  QAHR 64
             H+
Sbjct: 158 VGHK 161


>gi|118343788|ref|NP_001071714.1| transcription factor protein [Ciona intestinalis]
 gi|70569616|dbj|BAE06444.1| transcription factor protein [Ciona intestinalis]
          Length = 560

 Score = 65.5 bits (158), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 30/51 (58%), Positives = 38/51 (74%), Gaps = 1/51 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEGG-GRYRNVRRKS 53
           NSIRHNLSLNKCF+KVPR+KD PGKG +W +D    E+    R R ++RK+
Sbjct: 122 NSIRHNLSLNKCFMKVPRAKDDPGKGSYWAIDSNPQEDPILSRPRGIKRKA 172


>gi|119627571|gb|EAX07166.1| forkhead box J3, isoform CRA_b [Homo sapiens]
          Length = 382

 Score = 65.5 bits (158), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 31/53 (58%), Positives = 36/53 (67%), Gaps = 5/53 (9%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE-----GGGRYRNVRR 51
           NSIRHNLSLNKCF+KVPRSKD PGKG +W +D    E+        R R+V R
Sbjct: 124 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDVLPTRPKKRARSVER 176


>gi|358342479|dbj|GAA36751.2| forkhead box protein G1 [Clonorchis sinensis]
          Length = 577

 Score = 65.5 bits (158), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 32/59 (54%), Positives = 41/59 (69%), Gaps = 3/59 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG--GGRYRNVRRKSSDIQHRK 60
           NSIRHNLSLNKCFVKVPR+ D PGKG +W LD    E+   GG    +RR+++ +Q  +
Sbjct: 265 NSIRHNLSLNKCFVKVPRAYDDPGKGNYWMLD-PSCEDVYIGGTTGKLRRRTNSLQRNR 322


>gi|58430694|dbj|BAD89148.1| forkhead transcription factor [Danio rerio]
          Length = 360

 Score = 65.5 bits (158), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 32/64 (50%), Positives = 40/64 (62%), Gaps = 3/64 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKL---EEGGGRYRNVRRKSSDIQHRK 60
           NSIRHNLSLN CF+KVPR K +PGKG +W LD + L   E G  R R  + ++ D    K
Sbjct: 98  NSIRHNLSLNDCFIKVPREKGRPGKGSYWTLDTKCLDMFENGNYRRRKRKCRTQDTGDTK 157

Query: 61  QAHR 64
             H+
Sbjct: 158 VGHK 161


>gi|388594886|gb|AFK74878.1| transcription factor FoxK1 [Hydra vulgaris]
          Length = 775

 Score = 65.1 bits (157), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 31/50 (62%), Positives = 37/50 (74%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQ---KLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+D+PGKG FW++DL    KL E   R R  R
Sbjct: 316 NSIRHNLSLNRYFLKVPRSQDEPGKGSFWRIDLSCETKLMEQAFRKRRQR 365


>gi|348521678|ref|XP_003448353.1| PREDICTED: forkhead box protein J3 isoform 2 [Oreochromis
           niloticus]
          Length = 570

 Score = 65.1 bits (157), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 27/39 (69%), Positives = 31/39 (79%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG 42
           NSIRHNLSLNKCF+KVPRSKD PGKG +W +D    E+ 
Sbjct: 108 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDA 146


>gi|339259196|ref|XP_003369784.1| putative fork head domain protein [Trichinella spiralis]
 gi|316966010|gb|EFV50646.1| putative fork head domain protein [Trichinella spiralis]
          Length = 942

 Score = 65.1 bits (157), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 42/117 (35%), Positives = 66/117 (56%), Gaps = 19/117 (16%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDL---QKLEEGGGRYRNVRRKSS------ 54
           NSIRHNLSLN+ F+K+PRS+D+PGKG FW LD     KL +   R R  RR S+      
Sbjct: 232 NSIRHNLSLNRYFIKIPRSQDEPGKGNFWGLDSLSEAKLVQFAFRQRRSRRLSALGGVDQ 291

Query: 55  --DIQHRKQAHRPK--PAPSENLNTAYTNNNSIAPGENLNKLEDKLDDTLMESEISM 107
             D++ +KQ+ +      P +N+ T+  +++  A       +  K +D ++  E+S+
Sbjct: 292 KVDLKKKKQSSKATVIKEPVDNVITSSLSHDETA------TVRSKKEDNVVLPEVSV 342


>gi|311893307|ref|NP_001185781.1| forkhead box protein J3 isoform 2 [Homo sapiens]
          Length = 588

 Score = 65.1 bits (157), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 31/53 (58%), Positives = 36/53 (67%), Gaps = 5/53 (9%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE-----GGGRYRNVRR 51
           NSIRHNLSLNKCF+KVPRSKD PGKG +W +D    E+        R R+V R
Sbjct: 124 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDVLPTRPKKRARSVER 176


>gi|426383158|ref|XP_004058155.1| PREDICTED: forkhead box protein C2 [Gorilla gorilla gorilla]
          Length = 445

 Score = 65.1 bits (157), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 40/94 (42%), Positives = 50/94 (53%), Gaps = 5/94 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVRRKSSDIQHRK 60
           NSIRHNLSLN+CFVKVPR   +PGKG +W LD       E G    R  R K  D+   K
Sbjct: 118 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVSKEK 177

Query: 61  Q--AHRPKPAPSENLNTAYTNNNSIAPGENLNKL 92
           +  AH  +P P  +     T + + AP E   K+
Sbjct: 178 EERAHLKEPPPVASKGAPATPHLADAPKEAEKKV 211


>gi|395526752|ref|XP_003765520.1| PREDICTED: forkhead box protein J3 [Sarcophilus harrisii]
          Length = 729

 Score = 65.1 bits (157), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 32/56 (57%), Positives = 38/56 (67%), Gaps = 5/56 (8%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-----GGRYRNVRRKSS 54
           NSIRHNLSLNKCF+KVPRSKD PGKG +W +D    E+        R R+V R S+
Sbjct: 229 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDNNPKEDTLPSRPKKRARSVERAST 284


>gi|449670926|ref|XP_002157478.2| PREDICTED: uncharacterized protein LOC100202276 [Hydra
           magnipapillata]
          Length = 775

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 31/50 (62%), Positives = 37/50 (74%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQ---KLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+D+PGKG FW++DL    KL E   R R  R
Sbjct: 316 NSIRHNLSLNRYFLKVPRSQDEPGKGSFWRIDLSCETKLMEQAFRKRRQR 365


>gi|37360206|dbj|BAC98081.1| mKIAA1041 protein [Mus musculus]
          Length = 595

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 31/53 (58%), Positives = 36/53 (67%), Gaps = 5/53 (9%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-----GGRYRNVRR 51
           NSIRHNLSLNKCF+KVPRSKD PGKG +W +D    E+        R R+V R
Sbjct: 130 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDTLPTRPKKRARSVER 182


>gi|405964919|gb|EKC30358.1| Forkhead box protein J1-A [Crassostrea gigas]
          Length = 292

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/64 (50%), Positives = 43/64 (67%), Gaps = 3/64 (4%)

Query: 4  NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQ---KLEEGGGRYRNVRRKSSDIQHRK 60
          NSIRHNLSLNKCF KVPR KD+PGKGGFW+++ +    +E G  + R   R++  +   K
Sbjct: 36 NSIRHNLSLNKCFQKVPRRKDEPGKGGFWRINPEYNDMIENGIFKKRRNSRETPCLPPTK 95

Query: 61 QAHR 64
          +  R
Sbjct: 96 KIKR 99


>gi|391341221|ref|XP_003744929.1| PREDICTED: uncharacterized protein LOC100905488 [Metaseiulus
           occidentalis]
          Length = 421

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 31/58 (53%), Positives = 40/58 (68%), Gaps = 2/58 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDL--QKLEEGGGRYRNVRRKSSDIQHR 59
           NSIRHNLSLN CFVKVPR + +PGKG +W LD   +++ E G   R  RR +S ++ R
Sbjct: 165 NSIRHNLSLNDCFVKVPRERGKPGKGNYWTLDTKGEEMFENGNLRRRKRRPNSSVRLR 222


>gi|348552280|ref|XP_003461956.1| PREDICTED: hypothetical protein LOC100730783 [Cavia porcellus]
          Length = 686

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/98 (39%), Positives = 53/98 (54%), Gaps = 15/98 (15%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-----GGRYRNVRRKSSDIQH 58
           NSIRHNLSLNKCF+KVPRSKD PGKG +W +D    E+        R R+V R S+    
Sbjct: 124 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDTLPTRPKKRARSVERAST---- 179

Query: 59  RKQAHRPKPAPSENLNTAYTNNNSIAPGENLNKLEDKL 96
                 P    S++L      + S +P   +N + +K+
Sbjct: 180 ------PYSIDSDSLGMECIISGSASPTLAINTVTNKV 211


>gi|157786598|ref|NP_001099246.1| forkhead box protein I1 [Rattus norvegicus]
 gi|149052268|gb|EDM04085.1| forkhead box I1 (predicted), isoform CRA_a [Rattus norvegicus]
          Length = 372

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/96 (42%), Positives = 53/96 (55%), Gaps = 14/96 (14%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRK--------- 52
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ + G   R  +RK         
Sbjct: 163 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRKSDASSSTGS 222

Query: 53  --SSDIQHRKQAHRPKPA-PSENLNTAYTNNNSIAP 85
             S   ++R  +  PKP  P E L+TA  +  S +P
Sbjct: 223 LASEKTENRLLSSSPKPTEPQEVLDTASPDTTSSSP 258


>gi|17536629|ref|NP_496411.1| Protein UNC-130 [Caenorhabditis elegans]
 gi|3875031|emb|CAA88935.1| Protein UNC-130 [Caenorhabditis elegans]
          Length = 333

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/70 (48%), Positives = 41/70 (58%), Gaps = 4/70 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGG--RYRNVRRKSSDIQHR 59
           NSIRHNLSLN CFVKV R    PGKG +W LD   + + + G   R R   +K+SD  H 
Sbjct: 173 NSIRHNLSLNDCFVKVARGPGNPGKGNYWALDPNCEDMFDNGSFLRRRKRYKKNSDTYHE 232

Query: 60  KQAHRPKPAP 69
             +H P P P
Sbjct: 233 MMSHHPMPFP 242


>gi|395853111|ref|XP_003799061.1| PREDICTED: forkhead box protein J3 [Otolemur garnettii]
          Length = 842

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/98 (39%), Positives = 53/98 (54%), Gaps = 15/98 (15%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE-----GGGRYRNVRRKSSDIQH 58
           NSIRHNLSLNKCF+KVPRSKD PGKG +W +D    E+        R R+V R S+    
Sbjct: 344 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDVLPTRPKKRARSVERAST---- 399

Query: 59  RKQAHRPKPAPSENLNTAYTNNNSIAPGENLNKLEDKL 96
                 P    S++L      + S +P   +N + +K+
Sbjct: 400 ------PYSIDSDSLGMECIISGSASPTLAINTVTNKV 431


>gi|348514802|ref|XP_003444929.1| PREDICTED: forkhead box protein J3-like [Oreochromis niloticus]
          Length = 633

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 27/38 (71%), Positives = 31/38 (81%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE 41
           NSIRHNLSLNKCF+KVPRSKD PGKG +W +D    E+
Sbjct: 123 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKED 160


>gi|34596581|gb|AAQ76878.1| FOXD4 [Homo sapiens]
          Length = 494

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/78 (44%), Positives = 43/78 (55%), Gaps = 3/78 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDIQHRKQ 61
           NSIRHNLSLN CFVK+PR   +PGKG +W LD   Q + + G   R  R++    Q    
Sbjct: 150 NSIRHNLSLNDCFVKIPREPGRPGKGNYWSLDPASQDMFDNGSFLRR-RKRFQRHQPTPG 208

Query: 62  AHRPKPAPSENLNTAYTN 79
           AH P P P    + A  N
Sbjct: 209 AHLPHPFPLPAAHAALHN 226


>gi|355693196|gb|EHH27799.1| hypothetical protein EGK_18084, partial [Macaca mulatta]
          Length = 317

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/52 (61%), Positives = 37/52 (71%), Gaps = 1/52 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG  R +RR+S+
Sbjct: 55  NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTRKLRRRST 106


>gi|347964233|ref|XP_311187.5| AGAP000662-PA [Anopheles gambiae str. PEST]
 gi|347964235|ref|XP_003437051.1| AGAP000662-PB [Anopheles gambiae str. PEST]
 gi|347964237|ref|XP_003437052.1| AGAP000662-PC [Anopheles gambiae str. PEST]
 gi|333467435|gb|EAA06929.5| AGAP000662-PA [Anopheles gambiae str. PEST]
 gi|333467436|gb|EGK96554.1| AGAP000662-PB [Anopheles gambiae str. PEST]
 gi|333467437|gb|EGK96555.1| AGAP000662-PC [Anopheles gambiae str. PEST]
          Length = 689

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/82 (43%), Positives = 54/82 (65%), Gaps = 11/82 (13%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD----LQKLEEGGGRYRNVRRKSSDIQHR 59
           NSIRHNLSLN+ F+KVPRS+D+PGKG FW++D    L+ +++    YR  R++ S    R
Sbjct: 537 NSIRHNLSLNRYFIKVPRSQDEPGKGSFWRIDPSSELKLIDQ---SYRKRRQRGSQC-FR 592

Query: 60  KQAHRPKPAPSENLNTAYTNNN 81
                P+ AP   ++ +YT+N+
Sbjct: 593 SPFGMPRSAP---VSPSYTDNS 611


>gi|327286761|ref|XP_003228098.1| PREDICTED: forkhead box protein G1-like [Anolis carolinensis]
          Length = 333

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/58 (56%), Positives = 38/58 (65%), Gaps = 2/58 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG--GGRYRNVRRKSSDIQHR 59
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    E+   GG    +RR+S   Q +
Sbjct: 114 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSEEDVFIGGATGKLRRRSPSSQAK 171


>gi|22759701|dbj|BAC10917.1| winged helix/forkhead transcription factor [Dugesia japonica]
          Length = 260

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/60 (53%), Positives = 41/60 (68%), Gaps = 3/60 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG--GGRYRNVRRKSSDIQHRKQ 61
           NSIRHNLSLNKCF+KVPR  D PGKG +W +D    E+   GG    +RR+SS +Q  ++
Sbjct: 91  NSIRHNLSLNKCFIKVPRGYDDPGKGNYWMVD-PACEDVYIGGTTGKLRRRSSSVQRMQR 149


>gi|327287970|ref|XP_003228701.1| PREDICTED: forkhead box protein J1.2-like [Anolis carolinensis]
          Length = 344

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 27/34 (79%), Positives = 30/34 (88%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQ 37
           NSIRHNLSLNKCF KVPR KD+PGKGGFW++  Q
Sbjct: 165 NSIRHNLSLNKCFQKVPRRKDEPGKGGFWQIHPQ 198


>gi|443686852|gb|ELT89986.1| hypothetical protein CAPTEDRAFT_222987 [Capitella teleta]
          Length = 528

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 26/32 (81%), Positives = 30/32 (93%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCF KVPR KD+PGKGGFW+++
Sbjct: 181 NSIRHNLSLNKCFQKVPRRKDEPGKGGFWRIN 212


>gi|348504062|ref|XP_003439581.1| PREDICTED: forkhead box protein L1-like [Oreochromis niloticus]
          Length = 396

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/51 (58%), Positives = 37/51 (72%), Gaps = 1/51 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE-GGGRYRNVRRKS 53
           NSIRHNLSLN CF+KVPR K +PGKG +W LD + L+    G YR  +RK+
Sbjct: 99  NSIRHNLSLNDCFIKVPREKGRPGKGSYWTLDTKCLDMFENGNYRRRKRKA 149


>gi|73956953|ref|XP_851625.1| PREDICTED: forkhead box protein L1 [Canis lupus familiaris]
          Length = 356

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/62 (53%), Positives = 40/62 (64%), Gaps = 1/62 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE-GGGRYRNVRRKSSDIQHRKQA 62
           NSIRHNLSLN+CFVKVPR K +PGKG +W LD + L+    G YR  +RK        +A
Sbjct: 95  NSIRHNLSLNECFVKVPREKGRPGKGSYWTLDPRCLDMFENGNYRRRKRKPKPGAGPPEA 154

Query: 63  HR 64
            R
Sbjct: 155 KR 156


>gi|195999646|ref|XP_002109691.1| hypothetical protein TRIADDRAFT_21017 [Trichoplax adhaerens]
 gi|190587815|gb|EDV27857.1| hypothetical protein TRIADDRAFT_21017 [Trichoplax adhaerens]
          Length = 137

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/50 (66%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDL---QKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS D+PGKG FWKLD    QKL E   R R  R
Sbjct: 63  NSIRHNLSLNRYFLKVPRSPDEPGKGSFWKLDSMSEQKLMEQAFRRRRQR 112


>gi|310923326|ref|NP_001185637.1| forkhead box protein C2 [Macaca mulatta]
          Length = 501

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/94 (41%), Positives = 50/94 (53%), Gaps = 5/94 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVRRKSSDIQHRK 60
           NSIRHNLSLN+CFVKVPR   +PGKG +W LD       E G    R  R K  D+   K
Sbjct: 118 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVSKEK 177

Query: 61  Q--AHRPKPAPSENLNTAYTNNNSIAPGENLNKL 92
           +  AH  +P P+ +       + + AP E   K+
Sbjct: 178 EERAHLKEPPPAASKGAPAAPHLADAPKEAEKKV 211


>gi|395748185|ref|XP_003778723.1| PREDICTED: LOW QUALITY PROTEIN: forkhead box protein C2 [Pongo
           abelii]
          Length = 501

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/94 (41%), Positives = 50/94 (53%), Gaps = 5/94 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVRRKSSDIQHRK 60
           NSIRHNLSLN+CFVKVPR   +PGKG +W LD       E G    R  R K  D+   K
Sbjct: 118 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVSKEK 177

Query: 61  Q--AHRPKPAPSENLNTAYTNNNSIAPGENLNKL 92
           +  AH  +P P+ +       + + AP E   K+
Sbjct: 178 EERAHLKEPPPAASKGAPAAPHLADAPKEAEKKV 211


>gi|296231742|ref|XP_002761282.1| PREDICTED: forkhead box protein C2 [Callithrix jacchus]
          Length = 501

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/94 (41%), Positives = 50/94 (53%), Gaps = 5/94 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVRRKSSDIQHRK 60
           NSIRHNLSLN+CFVKVPR   +PGKG +W LD       E G    R  R K  D+   K
Sbjct: 118 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVSKEK 177

Query: 61  Q--AHRPKPAPSENLNTAYTNNNSIAPGENLNKL 92
           +  AH  +P P+ +       + + AP E   K+
Sbjct: 178 EERAHLKEPPPAASKGAPAAPHLADAPKEAEKKV 211


>gi|148221999|ref|NP_001080367.1| forkhead box protein I1-ema [Xenopus laevis]
 gi|82241632|sp|Q7ZYQ0.1|FXI1E_XENLA RecName: Full=Forkhead box protein I1-ema; Short=FoxI1-ema;
           AltName: Full=Ectodermally-expressed mesendoderm
           antagonist; Short=Xema; AltName: Full=FoxI3
 gi|27769129|gb|AAH42303.1| Foxi1 protein [Xenopus laevis]
 gi|66356298|gb|AAY45746.1| ectodermally-expressed mesendoderm antagonist [Xenopus laevis]
          Length = 373

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/66 (50%), Positives = 42/66 (63%), Gaps = 3/66 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDIQHRKQ 61
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ +  G +R  R++ SD+    Q
Sbjct: 169 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFD-NGNFRRKRKRKSDVSPNGQ 227

Query: 62  AHRPKP 67
               KP
Sbjct: 228 LSSDKP 233


>gi|45360553|ref|NP_988949.1| forkhead box protein I1-ema [Xenopus (Silurana) tropicalis]
 gi|82186634|sp|Q6P8A3.1|FXI1E_XENTR RecName: Full=Forkhead box protein I1-ema; Short=FoxI1-ema;
           AltName: Full=Ectodermally-expressed mesendoderm
           antagonist; AltName: Full=FoxI3
 gi|38174713|gb|AAH61326.1| forkhead box I1 [Xenopus (Silurana) tropicalis]
          Length = 373

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/66 (50%), Positives = 42/66 (63%), Gaps = 3/66 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDIQHRKQ 61
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ +  G +R  R++ SD+    Q
Sbjct: 169 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFD-NGNFRRKRKRKSDVSPNGQ 227

Query: 62  AHRPKP 67
               KP
Sbjct: 228 ISSDKP 233


>gi|395856867|ref|XP_003800839.1| PREDICTED: forkhead box protein L1 [Otolemur garnettii]
          Length = 350

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/62 (53%), Positives = 39/62 (62%), Gaps = 1/62 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE-GGGRYRNVRRKSSDIQHRKQA 62
           NSIRHNLSLN CFVKVPR K +PGKG +W LD + L+    G YR  +RK        +A
Sbjct: 95  NSIRHNLSLNDCFVKVPREKGRPGKGSYWTLDPRCLDMFENGNYRRRKRKPKPGPGAPEA 154

Query: 63  HR 64
            R
Sbjct: 155 KR 156


>gi|426248818|ref|XP_004018155.1| PREDICTED: forkhead box protein G1 [Ovis aries]
          Length = 553

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/66 (53%), Positives = 40/66 (60%), Gaps = 8/66 (12%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSSDIQHRKQA 62
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+        
Sbjct: 291 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRST-------T 343

Query: 63  HRPKPA 68
            R KPA
Sbjct: 344 SRAKPA 349


>gi|426243426|ref|XP_004015557.1| PREDICTED: forkhead box protein L1 [Ovis aries]
          Length = 307

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/62 (53%), Positives = 39/62 (62%), Gaps = 1/62 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE-GGGRYRNVRRKSSDIQHRKQA 62
           NSIRHNLSLN CFVKVPR K +PGKG +W LD + L+    G YR  +RK        +A
Sbjct: 82  NSIRHNLSLNDCFVKVPREKGRPGKGSYWTLDPRCLDMFENGNYRRRKRKPKPCPGGPEA 141

Query: 63  HR 64
            R
Sbjct: 142 KR 143


>gi|405963529|gb|EKC29093.1| Forkhead box protein J3 [Crassostrea gigas]
          Length = 421

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 26/32 (81%), Positives = 29/32 (90%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCF+KVPRSKD PGKG +W +D
Sbjct: 117 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAID 148


>gi|418205355|gb|AFX62231.1| forkhead box J1-like protein 4 [Schmidtea mediterranea]
          Length = 529

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/47 (61%), Positives = 36/47 (76%), Gaps = 3/47 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYR 47
           NS+RHNLSLNKCF KVPRSKD+ GKGGFW+++     +LE    +YR
Sbjct: 223 NSVRHNLSLNKCFEKVPRSKDERGKGGFWRINPKYADRLESNLIKYR 269


>gi|167987441|gb|ACA13392.1| forkhead box l1, partial [Scyliorhinus canicula]
          Length = 387

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/64 (48%), Positives = 39/64 (60%), Gaps = 3/64 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQ---KLEEGGGRYRNVRRKSSDIQHRK 60
           NSIRHNLSLN CF+KVPR K +PGKG +W LD +     E G  R R  + K    Q ++
Sbjct: 140 NSIRHNLSLNDCFIKVPREKGKPGKGSYWTLDPRCTDMFENGNYRRRKRKAKCQGAQEQR 199

Query: 61  QAHR 64
           +  R
Sbjct: 200 EVKR 203


>gi|170072730|ref|XP_001870245.1| fork head domain transcription factor slp2 [Culex quinquefasciatus]
 gi|167869129|gb|EDS32512.1| fork head domain transcription factor slp2 [Culex quinquefasciatus]
          Length = 401

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+
Sbjct: 155 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSAEDVFIGGSTGKLRRRST 206


>gi|119627572|gb|EAX07167.1| forkhead box J3, isoform CRA_c [Homo sapiens]
          Length = 188

 Score = 63.5 bits (153), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 27/38 (71%), Positives = 31/38 (81%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE 41
           NSIRHNLSLNKCF+KVPRSKD PGKG +W +D    E+
Sbjct: 124 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKED 161


>gi|134152688|ref|NP_001077066.1| forkhead box protein C2 [Equus caballus]
 gi|87245345|gb|ABD34840.1| forkhead box protein C2 [Equus caballus]
          Length = 502

 Score = 63.5 bits (153), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/94 (42%), Positives = 50/94 (53%), Gaps = 5/94 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVRRKSSDIQHRK 60
           NSIRHNLSLN+CFVKVPR   +PGKG +W LD       E G    R  R K  D+   K
Sbjct: 118 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVPKEK 177

Query: 61  Q--AHRPKPAPSENLNTAYTNNNSIAPGENLNKL 92
           +  AH  +P P+ +  T      + AP E   K+
Sbjct: 178 EERAHLKEPPPAASKGTPAGPPLADAPKEAEKKV 211


>gi|74227353|dbj|BAE21762.1| unnamed protein product [Mus musculus]
          Length = 186

 Score = 63.5 bits (153), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 26/32 (81%), Positives = 29/32 (90%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCF+KVPRSKD PGKG +W +D
Sbjct: 124 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAID 155


>gi|260830563|ref|XP_002610230.1| hypothetical protein BRAFLDRAFT_286825 [Branchiostoma floridae]
 gi|229295594|gb|EEN66240.1| hypothetical protein BRAFLDRAFT_286825 [Branchiostoma floridae]
          Length = 402

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 33/62 (53%), Positives = 39/62 (62%), Gaps = 1/62 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSSDIQHRKQA 62
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+     + A
Sbjct: 156 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRSTAAARSRLA 215

Query: 63  HR 64
            R
Sbjct: 216 FR 217


>gi|3171239|gb|AAC18392.1| transcription factor BF-1 [Branchiostoma floridae]
          Length = 402

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 33/62 (53%), Positives = 39/62 (62%), Gaps = 1/62 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSSDIQHRKQA 62
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+     + A
Sbjct: 156 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRSTAAARSRLA 215

Query: 63  HR 64
            R
Sbjct: 216 FR 217


>gi|260814658|ref|XP_002602031.1| hypothetical protein BRAFLDRAFT_82620 [Branchiostoma floridae]
 gi|229287336|gb|EEN58043.1| hypothetical protein BRAFLDRAFT_82620 [Branchiostoma floridae]
          Length = 189

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 30/55 (54%), Positives = 35/55 (63%), Gaps = 2/55 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRRKSSDI 56
           NSIRHNLSLN CFVK+PRS +QPGKGG W L  D   +   G   R   R S+ +
Sbjct: 123 NSIRHNLSLNDCFVKIPRSCEQPGKGGLWALHPDCGNMFAKGSYLRRTARFSTTV 177


>gi|196010768|ref|XP_002115248.1| hypothetical protein TRIADDRAFT_29433 [Trichoplax adhaerens]
 gi|190582019|gb|EDV22093.1| hypothetical protein TRIADDRAFT_29433 [Trichoplax adhaerens]
          Length = 158

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/52 (61%), Positives = 37/52 (71%), Gaps = 1/52 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
           NSIRHNLSLNKCF+KVPRS D PGKG +W LD    +   GG    +RR+SS
Sbjct: 106 NSIRHNLSLNKCFIKVPRSYDDPGKGNYWMLDPSSEDMYIGGTSGKLRRRSS 157


>gi|269785233|ref|NP_001161544.1| forkhead box L1 transcription factor [Saccoglossus kowalevskii]
 gi|268054073|gb|ACY92523.1| forkhead box L1 transcription factor [Saccoglossus kowalevskii]
          Length = 498

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/56 (55%), Positives = 38/56 (67%), Gaps = 2/56 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRRKSSDIQ 57
           NSIRHNLSLN CFVKVPR K +PGKG +W L  D +++ E G   R  RR  S ++
Sbjct: 101 NSIRHNLSLNDCFVKVPREKGKPGKGNYWSLAPDCEEMFENGNFRRRKRRPKSFLK 156


>gi|156372377|ref|XP_001629014.1| predicted protein [Nematostella vectensis]
 gi|156216005|gb|EDO36951.1| predicted protein [Nematostella vectensis]
          Length = 101

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/50 (62%), Positives = 37/50 (74%), Gaps = 3/50 (6%)

Query: 4  NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDL---QKLEEGGGRYRNVR 50
          NSIRHNLSLN+ FVKVPR++D+PGKG FW++D    QKL E   R R  R
Sbjct: 50 NSIRHNLSLNRYFVKVPRAQDEPGKGSFWRIDPSCEQKLAEQAFRKRRQR 99


>gi|307214241|gb|EFN89347.1| Forkhead box protein G1 [Harpegnathos saltator]
          Length = 417

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/63 (50%), Positives = 40/63 (63%), Gaps = 2/63 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQK--LEEGGGRYRNVRRKSSDIQHRKQ 61
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD     +  GG   +  RR ++  + R  
Sbjct: 158 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSEDVFIGGTTGKLRRRTTAASRSRLA 217

Query: 62  AHR 64
           A++
Sbjct: 218 AYK 220


>gi|171544949|ref|NP_001116391.1| forkhead box L1 [Oryzias latipes]
 gi|156152084|gb|ABU54322.1| forkhead box L1 [Oryzias latipes]
          Length = 326

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 33/63 (52%), Positives = 42/63 (66%), Gaps = 4/63 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE-GGGRYRNVRRKS---SDIQHR 59
           NSIRHNLSLN CF+KVPR + +PGKG +W LD + L+    G YR  +RK+   S +Q  
Sbjct: 96  NSIRHNLSLNDCFIKVPRERGRPGKGSYWTLDTKCLDMFENGNYRRRKRKTKNPSQVQDS 155

Query: 60  KQA 62
           K A
Sbjct: 156 KPA 158


>gi|117606397|ref|NP_001071091.1| sloppy-paired [Tribolium castaneum]
 gi|115498173|gb|ABD63010.2| sloppy-paired [Tribolium castaneum]
          Length = 311

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/60 (53%), Positives = 38/60 (63%), Gaps = 1/60 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSSDIQHRKQA 62
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+     + A
Sbjct: 129 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSAEDVFIGGTTGKLRRRSTAASRSRLA 188


>gi|443692515|gb|ELT94108.1| hypothetical protein CAPTEDRAFT_182306 [Capitella teleta]
          Length = 326

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/66 (53%), Positives = 41/66 (62%), Gaps = 1/66 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSSDIQHRKQA 62
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR++S  + R  A
Sbjct: 129 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSADDVYIGGTTGKLRRRTSGNRSRLHA 188

Query: 63  HRPKPA 68
               PA
Sbjct: 189 ALRHPA 194


>gi|242022160|ref|XP_002431509.1| Forkhead box protein E1, putative [Pediculus humanus corporis]
 gi|212516803|gb|EEB18771.1| Forkhead box protein E1, putative [Pediculus humanus corporis]
          Length = 462

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/60 (53%), Positives = 38/60 (63%), Gaps = 1/60 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSSDIQHRKQA 62
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+     + A
Sbjct: 198 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSEDVFIGGTTGKLRRRSTAASRSRLA 257


>gi|298501358|gb|ADI82845.1| FoxA2/HNF3beta forkhead domain transcription factor [Hydractinia
           echinata]
          Length = 330

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 30/54 (55%), Positives = 35/54 (64%), Gaps = 2/54 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRRKSSD 55
           NSIRH+LS N CF+KVPRS D+PGKG FW L  D   + E G   R  +R  SD
Sbjct: 145 NSIRHSLSFNDCFIKVPRSPDKPGKGSFWTLHPDAGNMFENGCYLRRQKRFKSD 198


>gi|294459895|ref|NP_001170880.1| forkfead transcription factor G1 [Bombyx mori]
 gi|291572201|dbj|BAI94472.1| forkfead transcrition factor BmFOXG1 [Bombyx mori]
          Length = 296

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+
Sbjct: 101 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDASADDVFIGGTTGKLRRRSA 152


>gi|410984141|ref|XP_003998390.1| PREDICTED: uncharacterized protein LOC101094971 [Felis catus]
          Length = 402

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/68 (51%), Positives = 41/68 (60%), Gaps = 13/68 (19%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE-GGGRYRNVRRKSSDIQHRKQA 62
           NSIRHNLSLN+CFVKVPR K +PGKG +W LD + L+    G YR  +RK          
Sbjct: 95  NSIRHNLSLNECFVKVPREKGRPGKGSYWTLDPRCLDMFENGNYRRRKRK---------- 144

Query: 63  HRPKPAPS 70
             PKP P 
Sbjct: 145 --PKPGPG 150


>gi|312383490|gb|EFR28557.1| hypothetical protein AND_03387 [Anopheles darlingi]
          Length = 364

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/82 (43%), Positives = 53/82 (64%), Gaps = 11/82 (13%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD----LQKLEEGGGRYRNVRRKSSDIQHR 59
           NSIRHNLSLN+ F+KVPRS+D+PGKG FW++D    L+ +++    YR  R++ S    R
Sbjct: 238 NSIRHNLSLNRYFIKVPRSQDEPGKGSFWRIDPSSELKLIDQS---YRKRRQRGSQC-FR 293

Query: 60  KQAHRPKPAPSENLNTAYTNNN 81
                P+ AP   ++  YT+N+
Sbjct: 294 TPFGMPRSAP---VSPNYTDNS 312


>gi|157125013|ref|XP_001654210.1| forkhead protein/ forkhead protein domain [Aedes aegypti]
 gi|108882739|gb|EAT46964.1| AAEL001912-PA [Aedes aegypti]
          Length = 375

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+
Sbjct: 147 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSAEDVFIGGSTGKLRRRST 198


>gi|357618054|gb|EHJ71149.1| forkfead transcription factor G1 [Danaus plexippus]
          Length = 303

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+
Sbjct: 118 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDASAEDVFIGGTTGKLRRRSA 169


>gi|402909237|ref|XP_003917329.1| PREDICTED: forkhead box protein C2 [Papio anubis]
          Length = 447

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 39/94 (41%), Positives = 50/94 (53%), Gaps = 5/94 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVRRKSSDIQHRK 60
           NSIRHNLSLN+CFVKVPR   +PGKG +W LD       E G    R  R K  D+   K
Sbjct: 118 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVSKEK 177

Query: 61  Q--AHRPKPAPSENLNTAYTNNNSIAPGENLNKL 92
           +  AH  +P P+ +       + + AP E   K+
Sbjct: 178 EERAHLKEPPPAASKGAPAAPHLADAPKEAEKKV 211


>gi|291222693|ref|XP_002731348.1| PREDICTED: fork-head box J2/3 transcription factor [Saccoglossus
           kowalevskii]
          Length = 438

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 26/32 (81%), Positives = 29/32 (90%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCF+KVPRSKD PGKG +W +D
Sbjct: 111 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAID 142


>gi|291230502|ref|XP_002735197.1| PREDICTED: brain factor 1 [Saccoglossus kowalevskii]
          Length = 380

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/60 (53%), Positives = 38/60 (63%), Gaps = 1/60 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSSDIQHRKQA 62
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+     + A
Sbjct: 114 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRSTSASRNRLA 173


>gi|313231739|emb|CBY08852.1| unnamed protein product [Oikopleura dioica]
          Length = 334

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/78 (43%), Positives = 45/78 (57%), Gaps = 12/78 (15%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRK--------- 52
           NSIRHNLSLN CF K+PR +D PGKG +W LD   +K+ + G   R  +R+         
Sbjct: 73  NSIRHNLSLNDCFKKMPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRRDNTTKKEVE 132

Query: 53  -SSDIQHRKQAHRPKPAP 69
             SD   R+  H+PK +P
Sbjct: 133 TGSDDYQRQAIHQPKASP 150


>gi|292622066|ref|XP_686801.4| PREDICTED: forkhead box protein J2-like [Danio rerio]
          Length = 516

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 45/76 (59%), Gaps = 11/76 (14%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEGGGRYRNVRRKSSDIQH----- 58
           NSIRHNLSLNKCF KVPR +  PGKG +W +D   +     + R V+R  +D +H     
Sbjct: 103 NSIRHNLSLNKCFRKVPRPQSDPGKGSYWTMD---VPPESTQPRGVKRPYTDDEHVVTPF 159

Query: 59  ---RKQAHRPKPAPSE 71
              +  A++P+P P +
Sbjct: 160 PETQLPANQPEPLPPQ 175


>gi|118601042|ref|NP_001073017.1| forkhead transcription factor J2 [Strongylocentrotus purpuratus]
 gi|82706182|gb|ABB89475.1| forkhead transcription factor J2 [Strongylocentrotus purpuratus]
          Length = 483

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 26/32 (81%), Positives = 29/32 (90%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCF+KVPRSKD PGKG +W +D
Sbjct: 109 NSIRHNLSLNKCFMKVPRSKDDPGKGSYWAID 140


>gi|431838544|gb|ELK00476.1| Forkhead box protein L1 [Pteropus alecto]
          Length = 349

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 33/62 (53%), Positives = 39/62 (62%), Gaps = 1/62 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE-GGGRYRNVRRKSSDIQHRKQA 62
           NSIRHNLSLN CFVKVPR K +PGKG +W LD + L+    G YR  +RK        +A
Sbjct: 95  NSIRHNLSLNDCFVKVPREKGRPGKGSYWTLDPRCLDMFENGNYRRRKRKPKPGPGASEA 154

Query: 63  HR 64
            R
Sbjct: 155 KR 156


>gi|395856865|ref|XP_003800838.1| PREDICTED: forkhead box protein C2 [Otolemur garnettii]
          Length = 498

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 36/72 (50%), Positives = 42/72 (58%), Gaps = 5/72 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVRRKSSDIQHRK 60
           NSIRHNLSLN+CFVKVPR   +PGKG +W LD       E G    R  R K  D+   K
Sbjct: 118 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVPKEK 177

Query: 61  Q--AHRPKPAPS 70
           +  AH  +P PS
Sbjct: 178 EERAHLKEPPPS 189


>gi|374277724|gb|AEZ03828.1| FoxG, partial [Terebratalia transversa]
          Length = 418

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/60 (53%), Positives = 38/60 (63%), Gaps = 1/60 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSSDIQHRKQA 62
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+     + A
Sbjct: 172 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRSTAASRSRLA 231


>gi|342318863|gb|AEL22915.1| fork head domain transcription factor [Nilaparvata lugens]
          Length = 380

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/104 (36%), Positives = 58/104 (55%), Gaps = 10/104 (9%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQK---LEEGGGRYRNVRRKSSDIQHRK 60
           NSIRH+LS N CFVKVPR+ D+PGKG FW L  +     E G    R  R K    +  +
Sbjct: 167 NSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHPESGNMFENGCYLRRQKRFKDEKKEAVR 226

Query: 61  QAHRPKPAPSENLN-TAYTNNNSIAPGENLNKLEDKLDDTLMES 103
           Q H+   +PS + + T +T +       +  KL++K++D ++ +
Sbjct: 227 QTHKSAVSPSHHGHQTPHTQH------LHDEKLKEKVEDVVLHA 264


>gi|194208873|ref|XP_001916650.1| PREDICTED: LOW QUALITY PROTEIN: forkhead box protein L1-like [Equus
           caballus]
          Length = 309

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 35/70 (50%), Positives = 41/70 (58%), Gaps = 13/70 (18%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSSDIQHRKQA 62
           NSIRHNLSLN CFVKVPR K +PGKG +W LD + L+    G YR  +RK          
Sbjct: 95  NSIRHNLSLNDCFVKVPREKGRPGKGSYWTLDPRCLDMFENGNYRRRKRK---------- 144

Query: 63  HRPKPAPSEN 72
             PKP P + 
Sbjct: 145 --PKPGPGDG 152


>gi|283464173|gb|ADB22670.1| fork-head box J2/3 transcription factor [Saccoglossus kowalevskii]
          Length = 361

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 26/32 (81%), Positives = 29/32 (90%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCF+KVPRSKD PGKG +W +D
Sbjct: 111 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAID 142


>gi|397500517|ref|XP_003820957.1| PREDICTED: forkhead box protein C2 [Pan paniscus]
          Length = 408

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 40/94 (42%), Positives = 51/94 (54%), Gaps = 5/94 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVRRKSSDIQHRK 60
           NSIRHNLSLN+CFVKVPR   +PGKG +W LD       E G    R  R K  D+   K
Sbjct: 118 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVSKEK 177

Query: 61  Q--AHRPKPAPSENLNTAYTNNNSIAPGENLNKL 92
           +  AH  +P P+ +     T + + AP E   K+
Sbjct: 178 EERAHLKEPPPAASKGAPATPHLADAPKEAEKKV 211


>gi|319433896|gb|ADV57817.1| fork head domain transcription factor slp2, partial [Culex pipiens
           complex sp. YL-2011]
 gi|319433904|gb|ADV57821.1| fork head domain transcription factor slp2, partial [Culex pipiens
           complex sp. YL-2011]
 gi|319433916|gb|ADV57827.1| fork head domain transcription factor slp2, partial [Culex pipiens
           complex sp. YL-2011]
 gi|319433918|gb|ADV57828.1| fork head domain transcription factor slp2, partial [Culex pipiens
           complex sp. YL-2011]
 gi|319433926|gb|ADV57832.1| fork head domain transcription factor slp2, partial [Culex pipiens
           complex sp. YL-2011]
          Length = 237

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 32/60 (53%), Positives = 38/60 (63%), Gaps = 1/60 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSSDIQHRKQA 62
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+     + A
Sbjct: 135 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSAEDVFIGGSTGKLRRRSTAASRSRLA 194


>gi|61823329|ref|XP_583889.1| PREDICTED: forkhead box protein L1 [Bos taurus]
 gi|297485174|ref|XP_002694802.1| PREDICTED: forkhead box protein L1 [Bos taurus]
 gi|296478047|tpg|DAA20162.1| TPA: forkhead box C2-like [Bos taurus]
          Length = 346

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 33/62 (53%), Positives = 39/62 (62%), Gaps = 1/62 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE-GGGRYRNVRRKSSDIQHRKQA 62
           NSIRHNLSLN CFVKVPR K +PGKG +W LD + L+    G YR  +RK        +A
Sbjct: 95  NSIRHNLSLNDCFVKVPREKGRPGKGSYWTLDPRCLDMFENGNYRRRKRKPKPGPGGPEA 154

Query: 63  HR 64
            R
Sbjct: 155 KR 156


>gi|311256907|ref|XP_003126859.1| PREDICTED: forkhead box protein L1-like [Sus scrofa]
          Length = 338

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 33/62 (53%), Positives = 39/62 (62%), Gaps = 1/62 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE-GGGRYRNVRRKSSDIQHRKQA 62
           NSIRHNLSLN CFVKVPR K +PGKG +W LD + L+    G YR  +RK        +A
Sbjct: 95  NSIRHNLSLNDCFVKVPREKGRPGKGSYWTLDPRCLDMFENGNYRRRKRKPKPGPGAPEA 154

Query: 63  HR 64
            R
Sbjct: 155 KR 156


>gi|319433898|gb|ADV57818.1| fork head domain transcription factor slp2, partial [Culex pipiens
           complex sp. YL-2011]
 gi|319433900|gb|ADV57819.1| fork head domain transcription factor slp2, partial [Culex pipiens
           complex sp. YL-2011]
 gi|319433902|gb|ADV57820.1| fork head domain transcription factor slp2, partial [Culex pipiens
           complex sp. YL-2011]
 gi|319433906|gb|ADV57822.1| fork head domain transcription factor slp2, partial [Culex pipiens
           complex sp. YL-2011]
 gi|319433908|gb|ADV57823.1| fork head domain transcription factor slp2, partial [Culex pipiens
           complex sp. YL-2011]
 gi|319433910|gb|ADV57824.1| fork head domain transcription factor slp2, partial [Culex pipiens
           complex sp. YL-2011]
 gi|319433912|gb|ADV57825.1| fork head domain transcription factor slp2, partial [Culex pipiens
           complex sp. YL-2011]
 gi|319433914|gb|ADV57826.1| fork head domain transcription factor slp2, partial [Culex pipiens
           complex sp. YL-2011]
 gi|319433920|gb|ADV57829.1| fork head domain transcription factor slp2, partial [Culex pipiens
           complex sp. YL-2011]
 gi|319433922|gb|ADV57830.1| fork head domain transcription factor slp2, partial [Culex pipiens
           complex sp. YL-2011]
 gi|319433924|gb|ADV57831.1| fork head domain transcription factor slp2, partial [Culex pipiens
           complex sp. YL-2011]
 gi|319433928|gb|ADV57833.1| fork head domain transcription factor slp2, partial [Culex pipiens
           complex sp. YL-2011]
 gi|319433930|gb|ADV57834.1| fork head domain transcription factor slp2, partial [Culex pipiens
           complex sp. YL-2011]
 gi|319433932|gb|ADV57835.1| fork head domain transcription factor slp2, partial [Culex pipiens
           complex sp. YL-2011]
 gi|319433934|gb|ADV57836.1| fork head domain transcription factor slp2, partial [Culex pipiens
           complex sp. YL-2011]
 gi|319433936|gb|ADV57837.1| fork head domain transcription factor slp2, partial [Culex pipiens
           complex sp. YL-2011]
 gi|319433938|gb|ADV57838.1| fork head domain transcription factor slp2, partial [Culex pipiens
           complex sp. YL-2011]
 gi|319433940|gb|ADV57839.1| fork head domain transcription factor slp2, partial [Culex pipiens
           complex sp. YL-2011]
 gi|319433942|gb|ADV57840.1| fork head domain transcription factor slp2, partial [Culex pipiens
           complex sp. YL-2011]
 gi|319433944|gb|ADV57841.1| fork head domain transcription factor slp2, partial [Culex pipiens
           complex sp. YL-2011]
 gi|319433946|gb|ADV57842.1| fork head domain transcription factor slp2, partial [Culex pipiens
           complex sp. YL-2011]
 gi|319433948|gb|ADV57843.1| fork head domain transcription factor slp2, partial [Culex pipiens
           complex sp. YL-2011]
 gi|319433950|gb|ADV57844.1| fork head domain transcription factor slp2, partial [Culex pipiens
           complex sp. YL-2011]
 gi|319433952|gb|ADV57845.1| fork head domain transcription factor slp2, partial [Culex pipiens
           complex sp. YL-2011]
 gi|319433954|gb|ADV57846.1| fork head domain transcription factor slp2, partial [Culex pipiens
           complex sp. YL-2011]
 gi|319433956|gb|ADV57847.1| fork head domain transcription factor slp2, partial [Culex pipiens
           complex sp. YL-2011]
 gi|319433958|gb|ADV57848.1| fork head domain transcription factor slp2, partial [Culex pipiens
           complex sp. YL-2011]
 gi|319433960|gb|ADV57849.1| fork head domain transcription factor slp2, partial [Culex pipiens
           complex sp. YL-2011]
 gi|319433962|gb|ADV57850.1| fork head domain transcription factor slp2, partial [Culex pipiens
           complex sp. YL-2011]
 gi|323371526|gb|ADX59629.1| fork head transcription factor [Culex theileri]
 gi|323371528|gb|ADX59630.1| fork head transcription factor [Culex theileri]
 gi|323371530|gb|ADX59631.1| fork head transcription factor [Culex theileri]
 gi|323371532|gb|ADX59632.1| fork head transcription factor [Culex theileri]
 gi|323371534|gb|ADX59633.1| fork head transcription factor [Culex theileri]
 gi|323371536|gb|ADX59634.1| fork head transcription factor [Culex theileri]
 gi|323371538|gb|ADX59635.1| fork head transcription factor [Culex theileri]
 gi|323371540|gb|ADX59636.1| fork head transcription factor [Culex theileri]
 gi|323371546|gb|ADX59639.1| fork head transcription factor [Culex theileri]
 gi|323371548|gb|ADX59640.1| fork head transcription factor [Culex theileri]
 gi|323371550|gb|ADX59641.1| fork head transcription factor [Culex theileri]
 gi|323371552|gb|ADX59642.1| fork head transcription factor [Culex theileri]
 gi|323371554|gb|ADX59643.1| fork head transcription factor [Culex theileri]
 gi|323371556|gb|ADX59644.1| fork head transcription factor [Culex theileri]
          Length = 237

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 32/60 (53%), Positives = 38/60 (63%), Gaps = 1/60 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSSDIQHRKQA 62
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+     + A
Sbjct: 135 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSAEDVFIGGSTGKLRRRSTAASRSRLA 194


>gi|195435023|ref|XP_002065501.1| GK15484 [Drosophila willistoni]
 gi|194161586|gb|EDW76487.1| GK15484 [Drosophila willistoni]
          Length = 468

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 32/63 (50%), Positives = 40/63 (63%), Gaps = 2/63 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDIQHRKQ 61
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD   + +  GG   +  RR ++  + R  
Sbjct: 184 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSAEDVFIGGSTGKLRRRTTAASRSRLA 243

Query: 62  AHR 64
           A +
Sbjct: 244 AFK 246


>gi|195401327|ref|XP_002059265.1| GJ16301 [Drosophila virilis]
 gi|194156139|gb|EDW71323.1| GJ16301 [Drosophila virilis]
          Length = 466

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 32/63 (50%), Positives = 40/63 (63%), Gaps = 2/63 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDIQHRKQ 61
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD   + +  GG   +  RR ++  + R  
Sbjct: 245 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSAEDVFIGGSTGKLRRRTTAASRSRLA 304

Query: 62  AHR 64
           A +
Sbjct: 305 AFK 307


>gi|10641134|dbj|BAB16313.1| fork head/HNF-3 homologue [Ciona savignyi]
          Length = 583

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 30/54 (55%), Positives = 35/54 (64%), Gaps = 2/54 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRRKSSD 55
           NSIRH+LS N CFVKVPRS D+PGKG +W L  D   + E G   R  +R  SD
Sbjct: 175 NSIRHSLSFNDCFVKVPRSADKPGKGSYWSLHPDAGNMFENGCYLRRQKRFKSD 228


>gi|18858697|ref|NP_571803.1| forkhead box C1-A [Danio rerio]
 gi|82247019|sp|Q9DE25.1|FXC1A_DANRE RecName: Full=Forkhead box C1-A
 gi|12004938|gb|AAG44241.1|AF219949_1 forkhead transcription factor c1.1 [Danio rerio]
 gi|31418753|gb|AAH53129.1| Forkhead box C1a [Danio rerio]
          Length = 476

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 38/94 (40%), Positives = 45/94 (47%), Gaps = 3/94 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVRRKSSDIQHRK 60
           NSIRHNLSLN+CFVKVPR   +PGKG +W LD       E G    R  R K  D    K
Sbjct: 120 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDAMKDK 179

Query: 61  QAHRPKPAPSENLNTAYTNNNSIAPGENLNKLED 94
           +    K APS              PG    +++D
Sbjct: 180 EDRGVKEAPSRQAQPQAREQEQSVPGSQPVRIQD 213


>gi|195471177|ref|XP_002087882.1| GE18263 [Drosophila yakuba]
 gi|194173983|gb|EDW87594.1| GE18263 [Drosophila yakuba]
          Length = 451

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 32/63 (50%), Positives = 40/63 (63%), Gaps = 2/63 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDIQHRKQ 61
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD   + +  GG   +  RR ++  + R  
Sbjct: 225 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSAEDVFIGGSTGKLRRRTTAASRSRLA 284

Query: 62  AHR 64
           A +
Sbjct: 285 AFK 287


>gi|126304942|ref|XP_001376265.1| PREDICTED: forkhead box protein L1-like [Monodelphis domestica]
          Length = 335

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/64 (53%), Positives = 41/64 (64%), Gaps = 1/64 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSSDIQHRKQA 62
           NSIRHNLSLN CFVKVPR K +PGKG +W LD + L+    G YR  +RK       ++A
Sbjct: 95  NSIRHNLSLNDCFVKVPREKGRPGKGSYWTLDPRCLDMFEHGNYRRRKRKPKPGPGVQEA 154

Query: 63  HRPK 66
            R K
Sbjct: 155 KRGK 158


>gi|194378860|dbj|BAG63595.1| unnamed protein product [Homo sapiens]
          Length = 583

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 30/50 (60%), Positives = 37/50 (74%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E G R R  R
Sbjct: 234 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQGFRKRRQR 283


>gi|332018620|gb|EGI59201.1| Fork head domain transcription factor slp2 [Acromyrmex echinatior]
          Length = 421

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 32/63 (50%), Positives = 39/63 (61%), Gaps = 2/63 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQK--LEEGGGRYRNVRRKSSDIQHRKQ 61
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD     +  GG   +  RR ++  + R  
Sbjct: 152 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSEDVFIGGATGKLRRRTTAASRSRLA 211

Query: 62  AHR 64
           A +
Sbjct: 212 AFK 214


>gi|427779635|gb|JAA55269.1| Putative forkhead transcription factor k strongylocentrotus
           purpuratus [Rhipicephalus pulchellus]
          Length = 535

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 31/50 (62%), Positives = 37/50 (74%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQ---KLEEGGGRYRNVR 50
           NSIRHNLSLN+ FVKVPRS+++PGKG FW++D Q   KL E   R R  R
Sbjct: 318 NSIRHNLSLNRYFVKVPRSQEEPGKGSFWRIDPQSEVKLVEQAFRRRRQR 367


>gi|312377410|gb|EFR24244.1| hypothetical protein AND_11295 [Anopheles darlingi]
          Length = 483

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 32/60 (53%), Positives = 38/60 (63%), Gaps = 1/60 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSSDIQHRKQA 62
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+     + A
Sbjct: 185 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSAEDVFIGGSTGKLRRRSTAASRSRLA 244


>gi|340373645|ref|XP_003385351.1| PREDICTED: forkhead box protein J3-like [Amphimedon queenslandica]
          Length = 501

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 30/56 (53%), Positives = 38/56 (67%), Gaps = 4/56 (7%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEGGGRYRNV----RRKSSD 55
           NSIRHNLSLNKCF KVPR K+ PGKG +W++D   LE+      +     +RK+SD
Sbjct: 147 NSIRHNLSLNKCFQKVPRPKEDPGKGSYWEIDPSPLEDSSETLSSSGFPRKRKTSD 202


>gi|195118596|ref|XP_002003822.1| GI18115 [Drosophila mojavensis]
 gi|193914397|gb|EDW13264.1| GI18115 [Drosophila mojavensis]
          Length = 488

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 32/63 (50%), Positives = 40/63 (63%), Gaps = 2/63 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDIQHRKQ 61
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD   + +  GG   +  RR ++  + R  
Sbjct: 240 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSAEDVFIGGSTGKLRRRTTAASRSRLA 299

Query: 62  AHR 64
           A +
Sbjct: 300 AFK 302


>gi|194758647|ref|XP_001961573.1| GF15039 [Drosophila ananassae]
 gi|190615270|gb|EDV30794.1| GF15039 [Drosophila ananassae]
          Length = 470

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 32/63 (50%), Positives = 40/63 (63%), Gaps = 2/63 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDIQHRKQ 61
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD   + +  GG   +  RR ++  + R  
Sbjct: 239 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSAEDVFIGGSTGKLRRRTTAASRSRLA 298

Query: 62  AHR 64
           A +
Sbjct: 299 AFK 301


>gi|32307809|gb|AAP79301.1| brain factor 1 [Saccoglossus kowalevskii]
          Length = 356

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 32/60 (53%), Positives = 38/60 (63%), Gaps = 1/60 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSSDIQHRKQA 62
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+     + A
Sbjct: 114 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRSTSASRNRLA 173


>gi|301792407|ref|XP_002931169.1| PREDICTED: forkhead box protein I1-like [Ailuropoda melanoleuca]
 gi|281349077|gb|EFB24661.1| hypothetical protein PANDA_021986 [Ailuropoda melanoleuca]
          Length = 378

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 39/98 (39%), Positives = 54/98 (55%), Gaps = 13/98 (13%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDIQHRKQ 61
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ +  G +R  R++ SDI     
Sbjct: 170 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFD-NGNFRRKRKRKSDISSS-- 226

Query: 62  AHRPKPAPSENLNTAYTNNNSIAPGENLNKLEDKLDDT 99
                   + +L +  T N+ +A      + +D LD T
Sbjct: 227 --------TGSLASEKTENSLLAGSPKTAEAQDILDST 256


>gi|195032370|ref|XP_001988487.1| GH11194 [Drosophila grimshawi]
 gi|193904487|gb|EDW03354.1| GH11194 [Drosophila grimshawi]
          Length = 478

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 32/63 (50%), Positives = 40/63 (63%), Gaps = 2/63 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDIQHRKQ 61
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD   + +  GG   +  RR ++  + R  
Sbjct: 255 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSAEDVFIGGSTGKLRRRTTAASRSRLA 314

Query: 62  AHR 64
           A +
Sbjct: 315 AFK 317


>gi|195342364|ref|XP_002037771.1| GM18443 [Drosophila sechellia]
 gi|194132621|gb|EDW54189.1| GM18443 [Drosophila sechellia]
          Length = 450

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 32/63 (50%), Positives = 40/63 (63%), Gaps = 2/63 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDIQHRKQ 61
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD   + +  GG   +  RR ++  + R  
Sbjct: 225 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSAEDVFIGGSTGKLRRRTTAASRSRLA 284

Query: 62  AHR 64
           A +
Sbjct: 285 AFK 287


>gi|328787799|ref|XP_003251005.1| PREDICTED: hypothetical protein LOC724740 [Apis mellifera]
          Length = 427

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 31/60 (51%), Positives = 38/60 (63%), Gaps = 1/60 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSSDIQHRKQA 62
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+++     + A
Sbjct: 157 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSEDVFIGGTTGKLRRRTTAASRSRLA 216


>gi|380021495|ref|XP_003694600.1| PREDICTED: fork head domain transcription factor slp1-like [Apis
           florea]
          Length = 427

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 31/60 (51%), Positives = 38/60 (63%), Gaps = 1/60 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSSDIQHRKQA 62
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+++     + A
Sbjct: 155 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSEDVFIGGTTGKLRRRTTAASRSRLA 214


>gi|158299896|ref|XP_319908.4| AGAP009147-PA [Anopheles gambiae str. PEST]
 gi|157013738|gb|EAA43390.4| AGAP009147-PA [Anopheles gambiae str. PEST]
          Length = 268

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 32/60 (53%), Positives = 38/60 (63%), Gaps = 1/60 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSSDIQHRKQA 62
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+     + A
Sbjct: 150 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSAEDVFIGGSTGKLRRRSTAASRSRLA 209


>gi|418205353|gb|AFX62230.1| forkhead box J1-like protein 3, partial [Schmidtea mediterranea]
          Length = 407

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 38/60 (63%), Gaps = 9/60 (15%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEGGGRYRNVRRKSSDIQHRKQAH 63
           NS+RHNLSL KCF KVPR KD+ GKGGFW+++    E  G  +         I++R+Q H
Sbjct: 138 NSVRHNLSLKKCFEKVPRKKDERGKGGFWRINPNFTENLGNNF---------IKYRRQFH 188


>gi|50754836|ref|XP_425185.1| PREDICTED: forkhead box protein I1-ema isoform 2 [Gallus gallus]
          Length = 375

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 31/55 (56%), Positives = 39/55 (70%), Gaps = 3/55 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDI 56
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ +  G +R  R++ SDI
Sbjct: 169 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFD-NGNFRRKRKRKSDI 222


>gi|224068210|ref|XP_002194993.1| PREDICTED: forkhead box protein I1-ema-like [Taeniopygia guttata]
          Length = 375

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 31/55 (56%), Positives = 39/55 (70%), Gaps = 3/55 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDI 56
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ +  G +R  R++ SDI
Sbjct: 169 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFD-NGNFRRKRKRKSDI 222


>gi|195147968|ref|XP_002014946.1| GL18683 [Drosophila persimilis]
 gi|194106899|gb|EDW28942.1| GL18683 [Drosophila persimilis]
          Length = 469

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 31/60 (51%), Positives = 38/60 (63%), Gaps = 1/60 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSSDIQHRKQA 62
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+++     + A
Sbjct: 242 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSAEDVFIGGSTGKLRRRTTAASRSRLA 301


>gi|17136668|ref|NP_476834.1| sloppy paired 2 [Drosophila melanogaster]
 gi|7295754|gb|AAF51057.1| sloppy paired 2 [Drosophila melanogaster]
 gi|376319294|gb|AFB18658.1| FI19501p1 [Drosophila melanogaster]
          Length = 451

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 32/63 (50%), Positives = 40/63 (63%), Gaps = 2/63 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDIQHRKQ 61
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD   + +  GG   +  RR ++  + R  
Sbjct: 226 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSAEDVFIGGSTGKLRRRTTAASRSRLA 285

Query: 62  AHR 64
           A +
Sbjct: 286 AFK 288


>gi|345481290|ref|XP_001602513.2| PREDICTED: hypothetical protein LOC100118579 [Nasonia vitripennis]
          Length = 424

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 31/60 (51%), Positives = 38/60 (63%), Gaps = 1/60 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSSDIQHRKQA 62
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+++     + A
Sbjct: 156 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDASSEDVFIGGTTGKLRRRTTAASRSRLA 215


>gi|426251431|ref|XP_004019425.1| PREDICTED: forkhead box protein C1 [Ovis aries]
          Length = 264

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 35/68 (51%), Positives = 40/68 (58%), Gaps = 13/68 (19%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSSDIQHRKQA 62
           NSIRHNLSLN CFVKVPR K +PGKG +W LD + L+    G YR  +RK          
Sbjct: 124 NSIRHNLSLNDCFVKVPREKGRPGKGSYWTLDPRCLDMFENGNYRRRKRK---------- 173

Query: 63  HRPKPAPS 70
             PKP P 
Sbjct: 174 --PKPGPG 179


>gi|194855836|ref|XP_001968626.1| GG24972 [Drosophila erecta]
 gi|190660493|gb|EDV57685.1| GG24972 [Drosophila erecta]
          Length = 452

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 32/63 (50%), Positives = 40/63 (63%), Gaps = 2/63 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDIQHRKQ 61
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD   + +  GG   +  RR ++  + R  
Sbjct: 226 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSAEDVFIGGSTGKLRRRTTAASRSRLA 285

Query: 62  AHR 64
           A +
Sbjct: 286 AFK 288


>gi|323371542|gb|ADX59637.1| fork head transcription factor [Culex theileri]
 gi|323371544|gb|ADX59638.1| fork head transcription factor [Culex theileri]
          Length = 218

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 32/60 (53%), Positives = 38/60 (63%), Gaps = 1/60 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSSDIQHRKQA 62
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+     + A
Sbjct: 116 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSAEDVFIGGSTGKLRRRSTAASRSRLA 175


>gi|340377303|ref|XP_003387169.1| PREDICTED: hypothetical protein LOC100635109 [Amphimedon
           queenslandica]
          Length = 473

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 31/61 (50%), Positives = 37/61 (60%), Gaps = 2/61 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQK--LEEGGGRYRNVRRKSSDIQHRKQ 61
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD     +   GG    +RR+    +H  +
Sbjct: 155 NSIRHNLSLNKCFVKVPRPYDDPGKGNYWTLDPSSDDIMFIGGTTGKLRRRPVSRRHGHE 214

Query: 62  A 62
            
Sbjct: 215 G 215


>gi|307186112|gb|EFN71837.1| Fork head domain transcription factor slp2 [Camponotus floridanus]
          Length = 412

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 31/60 (51%), Positives = 38/60 (63%), Gaps = 1/60 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSSDIQHRKQA 62
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+++     + A
Sbjct: 150 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSEDVFIGGTTGKLRRRTTAASRSRLA 209


>gi|198474400|ref|XP_001356669.2| GA15533 [Drosophila pseudoobscura pseudoobscura]
 gi|198138375|gb|EAL33734.2| GA15533 [Drosophila pseudoobscura pseudoobscura]
          Length = 471

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 30/52 (57%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+++
Sbjct: 244 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSAEDVFIGGSTGKLRRRTT 295


>gi|17945189|gb|AAL48653.1| RE11345p [Drosophila melanogaster]
 gi|134085522|gb|ABO52820.1| FI01001p [Drosophila melanogaster]
          Length = 451

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 32/63 (50%), Positives = 40/63 (63%), Gaps = 2/63 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDIQHRKQ 61
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD   + +  GG   +  RR ++  + R  
Sbjct: 226 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSAEDVFIGGSTGKLRRRTTAASRSRLA 285

Query: 62  AHR 64
           A +
Sbjct: 286 AFK 288


>gi|449267248|gb|EMC78214.1| Forkhead box protein I1-ema [Columba livia]
          Length = 375

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 31/55 (56%), Positives = 39/55 (70%), Gaps = 3/55 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDI 56
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ +  G +R  R++ SDI
Sbjct: 169 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFD-NGNFRRKRKRKSDI 222


>gi|326928283|ref|XP_003210310.1| PREDICTED: forkhead box protein I1-ema-like [Meleagris gallopavo]
          Length = 375

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 31/55 (56%), Positives = 39/55 (70%), Gaps = 3/55 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDI 56
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ +  G +R  R++ SDI
Sbjct: 169 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFD-NGNFRRKRKRKSDI 222


>gi|383861136|ref|XP_003706042.1| PREDICTED: uncharacterized protein LOC100878233 [Megachile
           rotundata]
          Length = 426

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 31/60 (51%), Positives = 38/60 (63%), Gaps = 1/60 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSSDIQHRKQA 62
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+++     + A
Sbjct: 155 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSEDVFIGGTTGKLRRRTTAASRSRLA 214


>gi|296476182|tpg|DAA18297.1| TPA: forkhead box K2-like [Bos taurus]
          Length = 359

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 30/53 (56%), Positives = 37/53 (69%), Gaps = 3/53 (5%)

Query: 1  MRVNSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDL---QKLEEGGGRYRNVR 50
          M  NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 1  MGENSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPR 53


>gi|322790892|gb|EFZ15558.1| hypothetical protein SINV_02679 [Solenopsis invicta]
          Length = 437

 Score = 62.4 bits (150), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 32/63 (50%), Positives = 39/63 (61%), Gaps = 2/63 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQK--LEEGGGRYRNVRRKSSDIQHRKQ 61
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD     +  GG   +  RR ++  + R  
Sbjct: 165 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSEDVFIGGATGKLRRRTTAASRSRLA 224

Query: 62  AHR 64
           A +
Sbjct: 225 AFK 227


>gi|118344410|ref|NP_001072032.1| transcription factor protein [Ciona intestinalis]
 gi|70569540|dbj|BAE06431.1| transcription factor protein [Ciona intestinalis]
          Length = 587

 Score = 62.4 bits (150), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 64/130 (49%), Gaps = 9/130 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRRKSSDIQHRKQ 61
           NSIRH+LS N CFVKVPRS D+PGKG +W L  D   + E G   R  +R  S+    K+
Sbjct: 177 NSIRHSLSFNDCFVKVPRSADKPGKGSYWSLHPDAGNMFENGCYLRRQKRFKSN----KK 232

Query: 62  AHRPKPAPSENLNTAYTNNNSIAPGENLNKLEDKLDDTLMESEI---SMTDDIDEDLILS 118
           +    P+  E+       N++++P  +++      +      E    S TD+   DL  S
Sbjct: 233 SKGAGPSSDEHSPLELVPNDAVSPPPSMSNPGSTHNSPHNSHETYADSDTDNKSPDLASS 292

Query: 119 NILLSGDSYW 128
             + S D  +
Sbjct: 293 TAITSHDQLY 302


>gi|169145931|emb|CAQ13817.1| novel protein similar to vertebrate forkhead box transcription
           factor [Danio rerio]
          Length = 379

 Score = 62.4 bits (150), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 33/60 (55%), Positives = 38/60 (63%), Gaps = 1/60 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSSDIQHRKQA 62
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+     K A
Sbjct: 136 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRSTAASRAKLA 195


>gi|118344336|ref|NP_001071991.1| transcription factor protein [Ciona intestinalis]
 gi|70569534|dbj|BAE06430.1| transcription factor protein [Ciona intestinalis]
          Length = 633

 Score = 62.4 bits (150), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 64/130 (49%), Gaps = 9/130 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRRKSSDIQHRKQ 61
           NSIRH+LS N CFVKVPRS D+PGKG +W L  D   + E G   R  +R  S+    K+
Sbjct: 177 NSIRHSLSFNDCFVKVPRSADKPGKGSYWSLHPDAGNMFENGCYLRRQKRFKSN----KK 232

Query: 62  AHRPKPAPSENLNTAYTNNNSIAPGENLNKLEDKLDDTLMESEI---SMTDDIDEDLILS 118
           +    P+  E+       N++++P  +++      +      E    S TD+   DL  S
Sbjct: 233 SKGAGPSSDEHSPLELVPNDAVSPPPSMSNPGSTHNSPHNSHETYADSDTDNKSPDLASS 292

Query: 119 NILLSGDSYW 128
             + S D  +
Sbjct: 293 TAITSHDQLY 302


>gi|47210051|emb|CAF92567.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 109

 Score = 62.4 bits (150), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 30/51 (58%), Positives = 37/51 (72%), Gaps = 1/51 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKS 53
           NSIRHNLSLN CF+KVPR K +PGKG +W LD + L+    G YR  +RK+
Sbjct: 58  NSIRHNLSLNDCFIKVPREKGRPGKGSYWTLDARCLDMFENGNYRRRKRKA 108


>gi|283464175|gb|ADB22671.1| fork-head box K transcription factor [Saccoglossus kowalevskii]
          Length = 512

 Score = 62.4 bits (150), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 30/50 (60%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDL---QKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW+LD     KL E   R R  R
Sbjct: 194 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRLDPASEAKLTEQAFRRRRQR 243


>gi|170034959|ref|XP_001845339.1| conserved hypothetical protein [Culex quinquefasciatus]
 gi|167876797|gb|EDS40180.1| conserved hypothetical protein [Culex quinquefasciatus]
          Length = 677

 Score = 62.4 bits (150), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 35/82 (42%), Positives = 53/82 (64%), Gaps = 11/82 (13%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD----LQKLEEGGGRYRNVRRKSSDIQHR 59
           NSIRHNLSLN+ F+KVPRS+D+PGKG FW++D    L+ +++    YR  R++ S    R
Sbjct: 517 NSIRHNLSLNRYFIKVPRSQDEPGKGSFWRIDPSSELKLIDQ---SYRKRRQRGSQC-FR 572

Query: 60  KQAHRPKPAPSENLNTAYTNNN 81
                P+ AP   ++ +Y +N+
Sbjct: 573 TPFGMPRSAP---VSPSYMDNS 591


>gi|113680631|ref|NP_001038680.1| forkhead box G1c [Danio rerio]
          Length = 379

 Score = 62.4 bits (150), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 33/60 (55%), Positives = 38/60 (63%), Gaps = 1/60 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSSDIQHRKQA 62
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+     K A
Sbjct: 136 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRSTAASRAKLA 195


>gi|391335010|ref|XP_003741890.1| PREDICTED: uncharacterized protein LOC100902875 [Metaseiulus
           occidentalis]
          Length = 437

 Score = 62.4 bits (150), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 3/65 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL---DLQKLEEGGGRYRNVRRKSSDIQHRK 60
           NSIRHNLSLN+CFVK+PR + +PGKG +W L    L   E G    R  R K SD++ + 
Sbjct: 89  NSIRHNLSLNECFVKIPRDEKKPGKGSYWTLHPESLNMFENGSYLRRRRRFKKSDLERKN 148

Query: 61  QAHRP 65
               P
Sbjct: 149 DVDEP 153


>gi|291244297|ref|XP_002742034.1| PREDICTED: fork-head box K transcription factor [Saccoglossus
           kowalevskii]
          Length = 602

 Score = 62.4 bits (150), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 30/50 (60%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDL---QKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW+LD     KL E   R R  R
Sbjct: 284 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRLDPASEAKLTEQAFRRRRQR 333


>gi|134024034|gb|AAI35134.1| foxl1 protein [Xenopus (Silurana) tropicalis]
          Length = 430

 Score = 62.4 bits (150), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 30/54 (55%), Positives = 37/54 (68%), Gaps = 1/54 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE-GGGRYRNVRRKSSDI 56
           NSIRHNLSLN CF+KVPR K +PGKG +W LD + L+    G +R  +RK   I
Sbjct: 121 NSIRHNLSLNDCFIKVPREKGRPGKGSYWTLDPKCLDMFENGNFRRRKRKPKPI 174


>gi|340712557|ref|XP_003394823.1| PREDICTED: fork head domain transcription factor slp1-like [Bombus
           terrestris]
          Length = 426

 Score = 62.4 bits (150), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 31/60 (51%), Positives = 38/60 (63%), Gaps = 1/60 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSSDIQHRKQA 62
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+++     + A
Sbjct: 155 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSEDVFIGGTTGKLRRRTTAASRSRLA 214


>gi|296478046|tpg|DAA20161.1| TPA: forkhead box C2 (MFH-1, mesenchyme forkhead 1) [Bos taurus]
          Length = 502

 Score = 62.4 bits (150), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 35/72 (48%), Positives = 42/72 (58%), Gaps = 5/72 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVRRKSSDIQHRK 60
           NSIRHNLSLN+CFVKVPR   +PGKG +W LD       E G    R  R K  D+   K
Sbjct: 118 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVPKEK 177

Query: 61  Q--AHRPKPAPS 70
           +  AH  +P P+
Sbjct: 178 EERAHLKEPPPA 189


>gi|327265172|ref|XP_003217382.1| PREDICTED: forkhead box protein I1-ema-like [Anolis carolinensis]
          Length = 375

 Score = 62.4 bits (150), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 31/55 (56%), Positives = 38/55 (69%), Gaps = 3/55 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDI 56
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ +  G +R  R+K SD 
Sbjct: 169 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFD-NGNFRRKRKKKSDC 222


>gi|432857929|ref|XP_004068796.1| PREDICTED: forkhead box protein J3-like, partial [Oryzias latipes]
          Length = 575

 Score = 62.4 bits (150), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 5/93 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEGGGRYRNVRRKSSDIQHRKQAH 63
           NSIRHNLSLNKCF+KV RSKD PGKG +W +D    E+        R +S +     +A 
Sbjct: 114 NSIRHNLSLNKCFLKVARSKDDPGKGSYWAIDTNPKEDALPTRPKKRPRSGE-----RAS 168

Query: 64  RPKPAPSENLNTAYTNNNSIAPGENLNKLEDKL 96
            P    SE+L      + S +P   +N + +K+
Sbjct: 169 TPYSLDSESLGMDCMISGSASPTLAINTVTNKV 201


>gi|300796545|ref|NP_001180001.1| forkhead box protein C2 [Bos taurus]
          Length = 502

 Score = 62.4 bits (150), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 35/72 (48%), Positives = 42/72 (58%), Gaps = 5/72 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVRRKSSDIQHRK 60
           NSIRHNLSLN+CFVKVPR   +PGKG +W LD       E G    R  R K  D+   K
Sbjct: 118 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVPKEK 177

Query: 61  Q--AHRPKPAPS 70
           +  AH  +P P+
Sbjct: 178 EERAHLKEPPPA 189


>gi|563170|gb|AAA92042.1| FREAC-7, partial [Homo sapiens]
          Length = 106

 Score = 62.4 bits (150), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 35/67 (52%), Positives = 40/67 (59%), Gaps = 13/67 (19%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSSDIQHRKQA 62
           NSIRHNLSLN CFVKVPR K +PGKG +W LD + L+    G YR  +RK          
Sbjct: 52  NSIRHNLSLNDCFVKVPREKGRPGKGSYWTLDPRCLDMFENGNYRRRKRK---------- 101

Query: 63  HRPKPAP 69
             PKP P
Sbjct: 102 --PKPGP 106


>gi|8621|emb|CAA46892.1| slp2 protein [Drosophila melanogaster]
          Length = 445

 Score = 62.4 bits (150), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 32/63 (50%), Positives = 40/63 (63%), Gaps = 2/63 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDIQHRKQ 61
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD   + +  GG   +  RR ++  + R  
Sbjct: 226 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSAEDVFIGGSTGKLRRRTTAASRSRLA 285

Query: 62  AHR 64
           A +
Sbjct: 286 AFK 288


>gi|260826664|ref|XP_002608285.1| hypothetical protein BRAFLDRAFT_87965 [Branchiostoma floridae]
 gi|229293636|gb|EEN64295.1| hypothetical protein BRAFLDRAFT_87965 [Branchiostoma floridae]
          Length = 344

 Score = 62.4 bits (150), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 36/84 (42%), Positives = 45/84 (53%), Gaps = 2/84 (2%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDIQHRKQ 61
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ + G   R  +R+        Q
Sbjct: 157 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRRDQSGGAGGQ 216

Query: 62  AHRPKPAPSENLNTAYTNNNSIAP 85
            +RP   P+     A T  N   P
Sbjct: 217 QNRPPGVPNPASKPAGTLENDPVP 240


>gi|87622882|gb|ABD38850.1| forkhead box G1 [Crocodylus niloticus]
          Length = 462

 Score = 62.4 bits (150), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+
Sbjct: 200 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRST 251


>gi|431917817|gb|ELK17051.1| Forkhead box protein G1 [Pteropus alecto]
          Length = 533

 Score = 62.4 bits (150), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 4  NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
          NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+
Sbjct: 16 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRST 67


>gi|390468911|ref|XP_002753744.2| PREDICTED: forkhead box protein G1 isoform 1 [Callithrix jacchus]
          Length = 496

 Score = 62.4 bits (150), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+
Sbjct: 225 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRST 276


>gi|390468909|ref|XP_003734023.1| PREDICTED: forkhead box protein G1 isoform 2 [Callithrix jacchus]
          Length = 478

 Score = 62.4 bits (150), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+
Sbjct: 207 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRST 258


>gi|270006433|gb|EFA02881.1| sloppy-paired 2 [Tribolium castaneum]
          Length = 444

 Score = 62.4 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+
Sbjct: 262 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSAEDVFIGGTTGKLRRRST 313


>gi|17380544|sp|P32031.2|SLP2_DROME RecName: Full=Fork head domain transcription factor slp2; AltName:
           Full=Sloppy paired locus protein 2
          Length = 445

 Score = 62.4 bits (150), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 32/63 (50%), Positives = 40/63 (63%), Gaps = 2/63 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDIQHRKQ 61
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD   + +  GG   +  RR ++  + R  
Sbjct: 226 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSAEDVFIGGSTGKLRRRTTAASRSRLA 285

Query: 62  AHR 64
           A +
Sbjct: 286 AFK 288


>gi|405976425|gb|EKC40931.1| Fork head domain transcription factor slp2 [Crassostrea gigas]
          Length = 403

 Score = 62.4 bits (150), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 32/60 (53%), Positives = 38/60 (63%), Gaps = 1/60 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSSDIQHRKQA 62
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+     + A
Sbjct: 165 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSCDDVFIGGTTGKLRRRSTTASRSRLA 224


>gi|363747012|ref|XP_001231599.2| PREDICTED: forkhead box protein L1 [Gallus gallus]
          Length = 303

 Score = 62.4 bits (150), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 32/54 (59%), Positives = 36/54 (66%), Gaps = 3/54 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVRRKSS 54
           NSIRHNLSLN CFVKVPR K +PGKG +W LD   L   E G  R R  + K+S
Sbjct: 86  NSIRHNLSLNDCFVKVPREKGRPGKGSYWTLDPRCLDMFENGNYRRRKRKPKAS 139


>gi|311747|emb|CAA50746.1| fkh-6 [Mus musculus]
          Length = 111

 Score = 62.4 bits (150), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 31/50 (62%), Positives = 37/50 (74%), Gaps = 1/50 (2%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRK 52
           NSIRHNLSLN+CFVKVPR K +PGKG +W LD + L+    G YR  +RK
Sbjct: 56  NSIRHNLSLNECFVKVPREKGRPGKGSYWTLDPRCLDMFENGNYRRRKRK 105


>gi|344296065|ref|XP_003419730.1| PREDICTED: forkhead box protein I2-like [Loxodonta africana]
          Length = 582

 Score = 62.4 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 28/51 (54%), Positives = 35/51 (68%), Gaps = 2/51 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRK 52
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ + G   R  +R+
Sbjct: 418 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGTFRRKRKRR 468


>gi|301613110|ref|XP_002936059.1| PREDICTED: hypothetical protein LOC100038263 [Xenopus (Silurana)
           tropicalis]
          Length = 495

 Score = 62.4 bits (150), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 30/54 (55%), Positives = 37/54 (68%), Gaps = 1/54 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE-GGGRYRNVRRKSSDI 56
           NSIRHNLSLN CF+KVPR K +PGKG +W LD + L+    G +R  +RK   I
Sbjct: 186 NSIRHNLSLNDCFIKVPREKGRPGKGSYWTLDPKCLDMFENGNFRRRKRKPKPI 239


>gi|118574787|sp|Q1A1A6.1|FOXG1_CEBCA RecName: Full=Forkhead box protein G1; Short=FoxG1
 gi|87622870|gb|ABD38844.1| forkhead box G1 [Cebus capucinus]
          Length = 489

 Score = 62.4 bits (150), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+
Sbjct: 227 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRST 278


>gi|29838553|gb|AAO92606.1| budhead [Hydra vulgaris]
          Length = 321

 Score = 62.4 bits (150), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 30/54 (55%), Positives = 34/54 (62%), Gaps = 2/54 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRRKSSD 55
           NSIRH+LS N CF+KVPRS D+PGKG FW L  D   + E G   R   R  SD
Sbjct: 127 NSIRHSLSFNDCFIKVPRSPDKPGKGSFWTLHPDAGNMFENGCYLRRRERFKSD 180


>gi|336174371|dbj|BAK40075.1| folkhead transcription factor FoxA2 [Takifugu niphobles]
          Length = 414

 Score = 62.0 bits (149), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 32/63 (50%), Positives = 37/63 (58%), Gaps = 2/63 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRRKSSDIQHRKQ 61
           NSIRH+LS N CFVKVPRS D+PGKG FW L  D   + E G   R  +R   D +  K 
Sbjct: 195 NSIRHSLSFNDCFVKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCDKKTMKD 254

Query: 62  AHR 64
             R
Sbjct: 255 GSR 257


>gi|157820649|ref|NP_001100545.1| forkhead box protein K2 [Rattus norvegicus]
 gi|149055128|gb|EDM06945.1| forkhead box K2 (predicted), isoform CRA_a [Rattus norvegicus]
          Length = 400

 Score = 62.0 bits (149), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDL---QKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 115 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLVEQAFRKRRPR 164


>gi|156119589|ref|NP_001095150.1| forkhead box protein C2 [Rattus norvegicus]
 gi|149038356|gb|EDL92716.1| rCG51679 [Rattus norvegicus]
          Length = 494

 Score = 62.0 bits (149), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 35/72 (48%), Positives = 42/72 (58%), Gaps = 5/72 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVRRKSSDIQHRK 60
           NSIRHNLSLN+CFVKVPR   +PGKG +W LD       E G    R  R K  D+   K
Sbjct: 117 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVPKDK 176

Query: 61  Q--AHRPKPAPS 70
           +  AH  +P P+
Sbjct: 177 EERAHLKEPPPA 188


>gi|118574789|sp|Q1A1A1.1|FOXG1_CERSI RecName: Full=Forkhead box protein G1; Short=FoxG1
 gi|87622880|gb|ABD38849.1| forkhead box G1 [Ceratotherium simum]
          Length = 486

 Score = 62.0 bits (149), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+
Sbjct: 224 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRST 275


>gi|312074417|ref|XP_003139961.1| fork head domain-containing protein [Loa loa]
          Length = 427

 Score = 62.0 bits (149), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 33/50 (66%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR 51
           NSIRH+LS N CFVKVPR+ D+PGKG FW L  D   + E G   R  +R
Sbjct: 182 NSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHEDCGNMFENGCYLRRQKR 231


>gi|270741126|gb|ACZ94039.1| sloppy-paired, partial [Oncopeltus fasciatus]
          Length = 186

 Score = 62.0 bits (149), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 32/60 (53%), Positives = 38/60 (63%), Gaps = 1/60 (1%)

Query: 4  NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSSDIQHRKQA 62
          NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+     + A
Sbjct: 33 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSEDVFIGGTTGKLRRRSTAASRSRLA 92


>gi|410949252|ref|XP_003981337.1| PREDICTED: forkhead box protein I1 isoform 1 [Felis catus]
          Length = 378

 Score = 62.0 bits (149), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 3/55 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDI 56
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ +  G +R  R++ SD+
Sbjct: 170 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFD-NGNFRRKRKRKSDV 223


>gi|350399880|ref|XP_003485669.1| PREDICTED: fork head domain transcription factor slp2-like [Bombus
           impatiens]
          Length = 376

 Score = 62.0 bits (149), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 31/60 (51%), Positives = 38/60 (63%), Gaps = 1/60 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSSDIQHRKQA 62
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+++     + A
Sbjct: 156 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSEDVFIGGTTGKLRRRTTAASRSRLA 215


>gi|8623|emb|CAA46891.1| slp2 protein [Drosophila melanogaster]
          Length = 445

 Score = 62.0 bits (149), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 32/63 (50%), Positives = 40/63 (63%), Gaps = 2/63 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDIQHRKQ 61
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD   + +  GG   +  RR ++  + R  
Sbjct: 226 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSAEDVFIGGSTGKLRRRTTAASRSRLA 285

Query: 62  AHR 64
           A +
Sbjct: 286 AFK 288


>gi|242013698|ref|XP_002427539.1| Forkhead box protein N3, putative [Pediculus humanus corporis]
 gi|212511941|gb|EEB14801.1| Forkhead box protein N3, putative [Pediculus humanus corporis]
          Length = 563

 Score = 62.0 bits (149), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 30/50 (60%), Positives = 37/50 (74%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQ---KLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D Q   KL E   R R  R
Sbjct: 327 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPQSESKLIEQAFRRRRQR 376


>gi|6679843|ref|NP_032267.1| forkhead box protein G1 [Mus musculus]
 gi|231571677|ref|NP_001153584.1| forkhead box protein G1 [Mus musculus]
 gi|2494483|sp|Q60987.1|FOXG1_MOUSE RecName: Full=Forkhead box protein G1; Short=FoxG1; AltName:
           Full=Brain factor 1; Short=BF-1; Short=BF1; AltName:
           Full=Forkhead-related protein FKHL1
 gi|1036833|gb|AAB42158.1| brain factor-1 [Mus musculus]
 gi|37574007|gb|AAH46958.2| Forkhead box G1 [Mus musculus]
 gi|74205597|dbj|BAE21092.1| unnamed protein product [Mus musculus]
          Length = 481

 Score = 62.0 bits (149), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+
Sbjct: 219 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRST 270


>gi|73953482|ref|XP_546245.2| PREDICTED: forkhead box protein I1 isoform 1 [Canis lupus
           familiaris]
          Length = 378

 Score = 62.0 bits (149), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 3/55 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDI 56
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ +  G +R  R++ SD+
Sbjct: 170 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFD-NGNFRRKRKRKSDV 223


>gi|393912298|gb|EFO24110.2| fork head domain-containing protein [Loa loa]
          Length = 430

 Score = 62.0 bits (149), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 33/50 (66%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR 51
           NSIRH+LS N CFVKVPR+ D+PGKG FW L  D   + E G   R  +R
Sbjct: 185 NSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHEDCGNMFENGCYLRRQKR 234


>gi|297488127|ref|XP_002707820.1| PREDICTED: LOW QUALITY PROTEIN: forkhead box protein G1 [Bos
           taurus]
 gi|296475381|tpg|DAA17496.1| TPA: forkhead box protein G1-like [Bos taurus]
          Length = 491

 Score = 62.0 bits (149), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+
Sbjct: 229 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRST 280


>gi|126282038|ref|XP_001364896.1| PREDICTED: forkhead box protein G1-like isoform 1 [Monodelphis
           domestica]
          Length = 503

 Score = 62.0 bits (149), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+
Sbjct: 241 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRST 292


>gi|307191174|gb|EFN74871.1| Forkhead box protein K2 [Camponotus floridanus]
          Length = 562

 Score = 62.0 bits (149), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 25/34 (73%), Positives = 31/34 (91%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQ 37
           NSIRHNLSLN+ F+KVPRS+++PGKG FWK+D Q
Sbjct: 320 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWKIDPQ 353


>gi|296473044|tpg|DAA15159.1| TPA: hypothetical protein LOC512522 [Bos taurus]
          Length = 1861

 Score = 62.0 bits (149), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 394 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQR 443


>gi|118574788|sp|Q1A1A5.1|FOXG1_CERPY RecName: Full=Forkhead box protein G1; Short=FoxG1
 gi|87622872|gb|ABD38845.1| forkhead box G1 [Chlorocebus pygerythrus]
          Length = 489

 Score = 62.0 bits (149), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+
Sbjct: 227 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRST 278


>gi|32307177|ref|NP_005240.3| forkhead box protein G1 [Homo sapiens]
 gi|402875877|ref|XP_003901719.1| PREDICTED: forkhead box protein G1-like [Papio anubis]
 gi|152031604|sp|P55316.2|FOXG1_HUMAN RecName: Full=Forkhead box protein G1; AltName: Full=Brain factor
           1; Short=BF-1; Short=BF1; AltName: Full=Brain factor 2;
           Short=BF-2; Short=BF2; Short=hBF-2; AltName:
           Full=Forkhead box protein G1A; AltName: Full=Forkhead
           box protein G1B; AltName: Full=Forkhead box protein G1C;
           AltName: Full=Forkhead-related protein FKHL1;
           Short=HFK1; AltName: Full=Forkhead-related protein
           FKHL2; Short=HFK2; AltName: Full=Forkhead-related
           protein FKHL3; Short=HFK3
 gi|119586382|gb|EAW65978.1| hCG1642160 [Homo sapiens]
          Length = 489

 Score = 62.0 bits (149), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+
Sbjct: 227 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRST 278


>gi|6978845|ref|NP_036692.1| forkhead box protein G1 [Rattus norvegicus]
 gi|399109|sp|Q00939.1|FOXG1_RAT RecName: Full=Forkhead box protein G1; Short=FoxG1; AltName:
           Full=Brain factor 1; Short=BF-1; Short=BF1; AltName:
           Full=Forkhead-related protein FKHL1
 gi|203135|gb|AAA40812.1| BF-1 [Rattus norvegicus]
 gi|149051193|gb|EDM03366.1| rCG62339 [Rattus norvegicus]
          Length = 480

 Score = 62.0 bits (149), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+
Sbjct: 218 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRST 269


>gi|118574791|sp|Q1A1A2.1|FOXG1_EQUBU RecName: Full=Forkhead box protein G1; Short=FoxG1
 gi|87622878|gb|ABD38848.1| forkhead box G1 [Equus burchellii]
          Length = 488

 Score = 62.0 bits (149), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+
Sbjct: 226 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRST 277


>gi|51094716|gb|EAL23965.1| KIAA0415 gene product [Homo sapiens]
          Length = 1518

 Score = 62.0 bits (149), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 329 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQR 378


>gi|341889041|gb|EGT44976.1| CBN-UNC-130 protein [Caenorhabditis brenneri]
          Length = 334

 Score = 62.0 bits (149), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 34/70 (48%), Positives = 41/70 (58%), Gaps = 4/70 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGG--RYRNVRRKSSDIQHR 59
           NSIRHNLSLN CFVKVPR    PGKG +W LD   + + + G   R R   +K+S+    
Sbjct: 177 NSIRHNLSLNDCFVKVPRGPGNPGKGNYWTLDPKCEDMFDNGSFLRRRKRYKKTSEDFPD 236

Query: 60  KQAHRPKPAP 69
             AH P P P
Sbjct: 237 MMAHHPMPFP 246


>gi|395838308|ref|XP_003792058.1| PREDICTED: forkhead box protein G1-like [Otolemur garnettii]
          Length = 405

 Score = 62.0 bits (149), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+
Sbjct: 143 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRST 194


>gi|119913893|ref|XP_001249413.1| PREDICTED: forkhead box protein G1 isoform 1 [Bos taurus]
          Length = 490

 Score = 62.0 bits (149), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+
Sbjct: 228 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRST 279


>gi|118574790|sp|Q1A1A3.1|FOXG1_EPOGA RecName: Full=Forkhead box protein G1; Short=FoxG1
 gi|87622876|gb|ABD38847.1| forkhead box G1 [Epomophorus gambianus]
          Length = 485

 Score = 62.0 bits (149), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+
Sbjct: 223 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRST 274


>gi|118574792|sp|Q1A1A4.1|FOXG1_PIPRU RecName: Full=Forkhead box protein G1; Short=FoxG1
 gi|87622874|gb|ABD38846.1| forkhead box G1 [Pipistrellus rusticus]
          Length = 484

 Score = 62.0 bits (149), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+
Sbjct: 222 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRST 273


>gi|432100088|gb|ELK28981.1| Forkhead box protein K1 [Myotis davidii]
          Length = 649

 Score = 62.0 bits (149), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 30/52 (57%), Positives = 37/52 (71%), Gaps = 3/52 (5%)

Query: 2   RVNSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           R NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 173 RSNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQR 224


>gi|170587172|ref|XP_001898352.1| Fork head domain containing protein [Brugia malayi]
 gi|158594178|gb|EDP32764.1| Fork head domain containing protein [Brugia malayi]
          Length = 427

 Score = 62.0 bits (149), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 33/50 (66%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR 51
           NSIRH+LS N CFVKVPR+ D+PGKG FW L  D   + E G   R  +R
Sbjct: 182 NSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHEDCGNMFENGCYLRRQKR 231


>gi|241117504|ref|XP_002401930.1| forkhead domain-containing protein, putative [Ixodes scapularis]
 gi|215493244|gb|EEC02885.1| forkhead domain-containing protein, putative [Ixodes scapularis]
          Length = 566

 Score = 62.0 bits (149), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 32/53 (60%), Positives = 38/53 (71%), Gaps = 3/53 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQ---KLEEGGGRYRNVRRKS 53
           NSIRHNLSLN+ FVKVPRS+++PGKG FW++D Q   KL E   R R  R  S
Sbjct: 311 NSIRHNLSLNRYFVKVPRSQEEPGKGSFWRIDPQSEGKLVEQAFRRRRQRGNS 363


>gi|198437981|ref|XP_002124993.1| PREDICTED: transcription factor protein [Ciona intestinalis]
          Length = 484

 Score = 62.0 bits (149), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 26/32 (81%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD
Sbjct: 160 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLD 191


>gi|449281416|gb|EMC88496.1| hypothetical protein A306_02698, partial [Columba livia]
          Length = 1490

 Score = 62.0 bits (149), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 300 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQR 349


>gi|348527448|ref|XP_003451231.1| PREDICTED: forkhead box protein G1-like [Oreochromis niloticus]
          Length = 441

 Score = 62.0 bits (149), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+
Sbjct: 169 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRST 220


>gi|158257784|dbj|BAF84865.1| unnamed protein product [Homo sapiens]
          Length = 378

 Score = 62.0 bits (149), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 3/55 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDI 56
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ +  G +R  R++ SD+
Sbjct: 169 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFD-NGNFRRKRKRKSDV 222


>gi|410898244|ref|XP_003962608.1| PREDICTED: hepatocyte nuclear factor 3-beta-like [Takifugu
           rubripes]
          Length = 425

 Score = 62.0 bits (149), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 32/63 (50%), Positives = 37/63 (58%), Gaps = 2/63 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRRKSSDIQHRKQ 61
           NSIRH+LS N CFVKVPRS D+PGKG FW L  D   + E G   R  +R   D +  K 
Sbjct: 206 NSIRHSLSFNDCFVKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCDKKTMKD 265

Query: 62  AHR 64
             R
Sbjct: 266 GGR 268


>gi|319740958|gb|ADV68999.1| forkhead box g [Patiria miniata]
          Length = 315

 Score = 62.0 bits (149), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+
Sbjct: 164 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRST 215


>gi|126290786|ref|XP_001370284.1| PREDICTED: forkhead box protein I1-like isoform 1 [Monodelphis
           domestica]
          Length = 377

 Score = 62.0 bits (149), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 3/55 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDI 56
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ +  G +R  R++ SD+
Sbjct: 168 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFD-NGNFRRKRKRKSDV 221


>gi|148223645|ref|NP_001079165.1| forkhead box protein G1 [Xenopus laevis]
 gi|82249050|sp|Q9YHC5.1|FOXG1_XENLA RecName: Full=Forkhead box protein G1; Short=FoxG1; AltName:
           Full=Brain factor 1; Short=BF-1; Short=xBF-1;
           Short=xBF1; AltName: Full=Forkhead protein 4;
           Short=FKH-4; Short=xFKH4
 gi|3925517|gb|AAC79501.1| brain factor-1 [Xenopus laevis]
          Length = 436

 Score = 62.0 bits (149), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+
Sbjct: 174 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRST 225


>gi|50345345|gb|AAT74650.1| forkhead [Ciona intestinalis]
          Length = 361

 Score = 62.0 bits (149), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 64/130 (49%), Gaps = 9/130 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRRKSSDIQHRKQ 61
           NSIRH+LS N CFVKVPRS D+PGKG +W L  D   + E G   R  +R  S+    K+
Sbjct: 177 NSIRHSLSFNDCFVKVPRSADKPGKGSYWSLHPDAGNMFENGCYLRRQKRFKSN----KK 232

Query: 62  AHRPKPAPSENLNTAYTNNNSIAPGENLNKLEDKLDDTLMESEI---SMTDDIDEDLILS 118
           +    P+  E+       N++++P  +++      +      E    S TD+   DL  S
Sbjct: 233 SKGAGPSSDEHSPLELVPNDAVSPPPSMSNPGSTHNSPHNSHETYADSDTDNKSPDLASS 292

Query: 119 NILLSGDSYW 128
             + S D  +
Sbjct: 293 TAITSHDQLY 302


>gi|403264852|ref|XP_003924681.1| PREDICTED: forkhead box protein G1 [Saimiri boliviensis
           boliviensis]
          Length = 454

 Score = 62.0 bits (149), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+
Sbjct: 192 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRST 243


>gi|50345343|gb|AAT74649.1| forkhead [Ciona intestinalis]
          Length = 361

 Score = 62.0 bits (149), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 64/130 (49%), Gaps = 9/130 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRRKSSDIQHRKQ 61
           NSIRH+LS N CFVKVPRS D+PGKG +W L  D   + E G   R  +R  S+    K+
Sbjct: 177 NSIRHSLSFNDCFVKVPRSADKPGKGSYWSLHPDAGNMFENGCYLRRQKRFKSN----KK 232

Query: 62  AHRPKPAPSENLNTAYTNNNSIAPGENLNKLEDKLDDTLMESEI---SMTDDIDEDLILS 118
           +    P+  E+       N++++P  +++      +      E    S TD+   DL  S
Sbjct: 233 SKGAGPSSDEHSPLELVPNDAVSPPPSMSNPGSTHNSPHNSHETYADSDTDNKSPDLASS 292

Query: 119 NILLSGDSYW 128
             + S D  +
Sbjct: 293 TAITSHDQLY 302


>gi|50345317|gb|AAT74636.1| forkhead [Ciona intestinalis]
 gi|50345319|gb|AAT74637.1| forkhead [Ciona intestinalis]
 gi|50345331|gb|AAT74643.1| forkhead [Ciona intestinalis]
 gi|50345333|gb|AAT74644.1| forkhead [Ciona intestinalis]
          Length = 361

 Score = 62.0 bits (149), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 64/130 (49%), Gaps = 9/130 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRRKSSDIQHRKQ 61
           NSIRH+LS N CFVKVPRS D+PGKG +W L  D   + E G   R  +R  S+    K+
Sbjct: 177 NSIRHSLSFNDCFVKVPRSADKPGKGSYWSLHPDAGNMFENGCYLRRQKRFKSN----KK 232

Query: 62  AHRPKPAPSENLNTAYTNNNSIAPGENLNKLEDKLDDTLMESEI---SMTDDIDEDLILS 118
           +    P+  E+       N++++P  +++      +      E    S TD+   DL  S
Sbjct: 233 SKGAGPSSDEHSPLELVPNDAVSPPPSMSNPGSTHNSPHNSHETYADSDTDNKSPDLASS 292

Query: 119 NILLSGDSYW 128
             + S D  +
Sbjct: 293 TAITSHDQLY 302


>gi|395505052|ref|XP_003756860.1| PREDICTED: forkhead box protein I1 [Sarcophilus harrisii]
          Length = 377

 Score = 62.0 bits (149), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 3/55 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDI 56
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ +  G +R  R++ SD+
Sbjct: 168 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFD-NGNFRRKRKRKSDV 221


>gi|344265249|ref|XP_003404697.1| PREDICTED: forkhead box protein I1 isoform 1 [Loxodonta africana]
          Length = 378

 Score = 62.0 bits (149), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 3/55 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDI 56
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ +  G +R  R++ SD+
Sbjct: 170 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFD-NGNFRRKRKRKSDV 223


>gi|50345301|gb|AAT74628.1| forkhead [Ciona intestinalis]
 gi|50345303|gb|AAT74629.1| forkhead [Ciona intestinalis]
 gi|50345305|gb|AAT74630.1| forkhead [Ciona intestinalis]
 gi|50345311|gb|AAT74633.1| forkhead [Ciona intestinalis]
 gi|50345313|gb|AAT74634.1| forkhead [Ciona intestinalis]
 gi|50345315|gb|AAT74635.1| forkhead [Ciona intestinalis]
 gi|50345321|gb|AAT74638.1| forkhead [Ciona intestinalis]
 gi|50345329|gb|AAT74642.1| forkhead [Ciona intestinalis]
 gi|50345363|gb|AAT74659.1| forkhead [Ciona intestinalis]
          Length = 361

 Score = 62.0 bits (149), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 64/130 (49%), Gaps = 9/130 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRRKSSDIQHRKQ 61
           NSIRH+LS N CFVKVPRS D+PGKG +W L  D   + E G   R  +R  S+    K+
Sbjct: 177 NSIRHSLSFNDCFVKVPRSADKPGKGSYWSLHPDAGNMFENGCYLRRQKRFKSN----KK 232

Query: 62  AHRPKPAPSENLNTAYTNNNSIAPGENLNKLEDKLDDTLMESEI---SMTDDIDEDLILS 118
           +    P+  E+       N++++P  +++      +      E    S TD+   DL  S
Sbjct: 233 SKGAGPSSDEHSPLELVPNDAVSPPPSMSNPGSTHNSPHNSHETYADSDTDNKSPDLASS 292

Query: 119 NILLSGDSYW 128
             + S D  +
Sbjct: 293 TAITSHDQLY 302


>gi|50345307|gb|AAT74631.1| forkhead [Ciona intestinalis]
 gi|50345309|gb|AAT74632.1| forkhead [Ciona intestinalis]
 gi|50345325|gb|AAT74640.1| forkhead [Ciona intestinalis]
 gi|50345341|gb|AAT74648.1| forkhead [Ciona intestinalis]
 gi|50345347|gb|AAT74651.1| forkhead [Ciona intestinalis]
 gi|50345349|gb|AAT74652.1| forkhead [Ciona intestinalis]
          Length = 361

 Score = 62.0 bits (149), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 64/130 (49%), Gaps = 9/130 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRRKSSDIQHRKQ 61
           NSIRH+LS N CFVKVPRS D+PGKG +W L  D   + E G   R  +R  S+    K+
Sbjct: 177 NSIRHSLSFNDCFVKVPRSADKPGKGSYWSLHPDAGNMFENGCYLRRQKRFKSN----KK 232

Query: 62  AHRPKPAPSENLNTAYTNNNSIAPGENLNKLEDKLDDTLMESEI---SMTDDIDEDLILS 118
           +    P+  E+       N++++P  +++      +      E    S TD+   DL  S
Sbjct: 233 SKGAGPSSDEHSPLELVPNDAVSPPPSMSNPGSTHNSPHNSHETYADSDTDNKSPDLASS 292

Query: 119 NILLSGDSYW 128
             + S D  +
Sbjct: 293 TAITSHDQLY 302


>gi|441667630|ref|XP_003261005.2| PREDICTED: forkhead box protein G1, partial [Nomascus leucogenys]
          Length = 560

 Score = 62.0 bits (149), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+
Sbjct: 317 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRST 368


>gi|148704849|gb|EDL36796.1| mCG5477 [Mus musculus]
          Length = 458

 Score = 62.0 bits (149), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+
Sbjct: 196 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRST 247


>gi|50345323|gb|AAT74639.1| forkhead [Ciona intestinalis]
 gi|50345327|gb|AAT74641.1| forkhead [Ciona intestinalis]
 gi|50345335|gb|AAT74645.1| forkhead [Ciona intestinalis]
 gi|50345339|gb|AAT74647.1| forkhead [Ciona intestinalis]
          Length = 361

 Score = 62.0 bits (149), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 64/130 (49%), Gaps = 9/130 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRRKSSDIQHRKQ 61
           NSIRH+LS N CFVKVPRS D+PGKG +W L  D   + E G   R  +R  S+    K+
Sbjct: 177 NSIRHSLSFNDCFVKVPRSADKPGKGSYWSLHPDAGNMFENGCYLRRQKRFKSN----KK 232

Query: 62  AHRPKPAPSENLNTAYTNNNSIAPGENLNKLEDKLDDTLMESEI---SMTDDIDEDLILS 118
           +    P+  E+       N++++P  +++      +      E    S TD+   DL  S
Sbjct: 233 SKGAGPSSDEHSPLELVPNDAVSPPPSMSNPGSTHNSPHNSHETYADSDTDNKSPDLASS 292

Query: 119 NILLSGDSYW 128
             + S D  +
Sbjct: 293 TAITSHDQLY 302


>gi|21618327|ref|NP_036320.2| forkhead box protein I1 isoform a [Homo sapiens]
 gi|150421552|sp|Q12951.3|FOXI1_HUMAN RecName: Full=Forkhead box protein I1; AltName:
           Full=Forkhead-related protein FKHL10; AltName:
           Full=Forkhead-related transcription factor 6;
           Short=FREAC-6; AltName: Full=Hepatocyte nuclear factor 3
           forkhead homolog 3; Short=HFH-3; Short=HNF-3/fork-head
           homolog 3
 gi|119581894|gb|EAW61490.1| forkhead box I1, isoform CRA_b [Homo sapiens]
 gi|208968411|dbj|BAG74044.1| forkhead box I1 [synthetic construct]
 gi|306569445|gb|ADN03217.1| forkhead box I1 [Homo sapiens]
 gi|306569447|gb|ADN03218.1| forkhead box I1 [Homo sapiens]
 gi|306569449|gb|ADN03219.1| forkhead box I1 [Homo sapiens]
 gi|306569451|gb|ADN03220.1| forkhead box I1 [Homo sapiens]
 gi|306569453|gb|ADN03221.1| forkhead box I1 [Homo sapiens]
 gi|306569455|gb|ADN03222.1| forkhead box I1 [Homo sapiens]
 gi|306569457|gb|ADN03223.1| forkhead box I1 [Homo sapiens]
 gi|306569459|gb|ADN03224.1| forkhead box I1 [Homo sapiens]
 gi|306569461|gb|ADN03225.1| forkhead box I1 [Homo sapiens]
 gi|306569463|gb|ADN03226.1| forkhead box I1 [Homo sapiens]
 gi|306569465|gb|ADN03227.1| forkhead box I1 [Homo sapiens]
 gi|306569467|gb|ADN03228.1| forkhead box I1 [Homo sapiens]
 gi|306569469|gb|ADN03229.1| forkhead box I1 [Homo sapiens]
 gi|306569471|gb|ADN03230.1| forkhead box I1 [Homo sapiens]
 gi|306569473|gb|ADN03231.1| forkhead box I1 [Homo sapiens]
 gi|306569475|gb|ADN03232.1| forkhead box I1 [Homo sapiens]
 gi|306569477|gb|ADN03233.1| forkhead box I1 [Homo sapiens]
 gi|306569479|gb|ADN03234.1| forkhead box I1 [Homo sapiens]
 gi|306569481|gb|ADN03235.1| forkhead box I1 [Homo sapiens]
 gi|306569483|gb|ADN03236.1| forkhead box I1 [Homo sapiens]
 gi|306569485|gb|ADN03237.1| forkhead box I1 [Homo sapiens]
 gi|306569487|gb|ADN03238.1| forkhead box I1 [Homo sapiens]
 gi|306569489|gb|ADN03239.1| forkhead box I1 [Homo sapiens]
 gi|306569491|gb|ADN03240.1| forkhead box I1 [Homo sapiens]
 gi|306569493|gb|ADN03241.1| forkhead box I1 [Homo sapiens]
 gi|306569495|gb|ADN03242.1| forkhead box I1 [Homo sapiens]
 gi|306569497|gb|ADN03243.1| forkhead box I1 [Homo sapiens]
 gi|306569499|gb|ADN03244.1| forkhead box I1 [Homo sapiens]
 gi|306569501|gb|ADN03245.1| forkhead box I1 [Homo sapiens]
 gi|306569503|gb|ADN03246.1| forkhead box I1 [Homo sapiens]
 gi|306569505|gb|ADN03247.1| forkhead box I1 [Homo sapiens]
 gi|306569507|gb|ADN03248.1| forkhead box I1 [Homo sapiens]
 gi|306569509|gb|ADN03249.1| forkhead box I1 [Homo sapiens]
 gi|306569511|gb|ADN03250.1| forkhead box I1 [Homo sapiens]
 gi|306569513|gb|ADN03251.1| forkhead box I1 [Homo sapiens]
 gi|306569515|gb|ADN03252.1| forkhead box I1 [Homo sapiens]
 gi|306569517|gb|ADN03253.1| forkhead box I1 [Homo sapiens]
 gi|306569519|gb|ADN03254.1| forkhead box I1 [Homo sapiens]
 gi|306569521|gb|ADN03255.1| forkhead box I1 [Homo sapiens]
 gi|306569523|gb|ADN03256.1| forkhead box I1 [Homo sapiens]
 gi|306569525|gb|ADN03257.1| forkhead box I1 [Homo sapiens]
 gi|306569527|gb|ADN03258.1| forkhead box I1 [Homo sapiens]
 gi|306569529|gb|ADN03259.1| forkhead box I1 [Homo sapiens]
 gi|306569531|gb|ADN03260.1| forkhead box I1 [Homo sapiens]
 gi|306569533|gb|ADN03261.1| forkhead box I1 [Homo sapiens]
 gi|306569535|gb|ADN03262.1| forkhead box I1 [Homo sapiens]
 gi|306569537|gb|ADN03263.1| forkhead box I1 [Homo sapiens]
 gi|306569539|gb|ADN03264.1| forkhead box I1 [Homo sapiens]
 gi|306569541|gb|ADN03265.1| forkhead box I1 [Homo sapiens]
 gi|306569543|gb|ADN03266.1| forkhead box I1 [Homo sapiens]
 gi|306569545|gb|ADN03267.1| forkhead box I1 [Homo sapiens]
 gi|306569547|gb|ADN03268.1| forkhead box I1 [Homo sapiens]
 gi|306569549|gb|ADN03269.1| forkhead box I1 [Homo sapiens]
 gi|306569551|gb|ADN03270.1| forkhead box I1 [Homo sapiens]
 gi|306569553|gb|ADN03271.1| forkhead box I1 [Homo sapiens]
 gi|306569555|gb|ADN03272.1| forkhead box I1 [Homo sapiens]
 gi|306569557|gb|ADN03273.1| forkhead box I1 [Homo sapiens]
 gi|306569559|gb|ADN03274.1| forkhead box I1 [Homo sapiens]
 gi|306569561|gb|ADN03275.1| forkhead box I1 [Homo sapiens]
 gi|306569563|gb|ADN03276.1| forkhead box I1 [Homo sapiens]
 gi|306569565|gb|ADN03277.1| forkhead box I1 [Homo sapiens]
 gi|306569567|gb|ADN03278.1| forkhead box I1 [Homo sapiens]
 gi|306569569|gb|ADN03279.1| forkhead box I1 [Homo sapiens]
 gi|306569571|gb|ADN03280.1| forkhead box I1 [Homo sapiens]
 gi|306569573|gb|ADN03281.1| forkhead box I1 [Homo sapiens]
 gi|306569575|gb|ADN03282.1| forkhead box I1 [Homo sapiens]
 gi|306569577|gb|ADN03283.1| forkhead box I1 [Homo sapiens]
 gi|306569579|gb|ADN03284.1| forkhead box I1 [Homo sapiens]
 gi|306569581|gb|ADN03285.1| forkhead box I1 [Homo sapiens]
 gi|306569583|gb|ADN03286.1| forkhead box I1 [Homo sapiens]
 gi|306569585|gb|ADN03287.1| forkhead box I1 [Homo sapiens]
 gi|306569587|gb|ADN03288.1| forkhead box I1 [Homo sapiens]
 gi|306569589|gb|ADN03289.1| forkhead box I1 [Homo sapiens]
 gi|306569591|gb|ADN03290.1| forkhead box I1 [Homo sapiens]
 gi|306569593|gb|ADN03291.1| forkhead box I1 [Homo sapiens]
 gi|306569595|gb|ADN03292.1| forkhead box I1 [Homo sapiens]
 gi|306569597|gb|ADN03293.1| forkhead box I1 [Homo sapiens]
 gi|306569599|gb|ADN03294.1| forkhead box I1 [Homo sapiens]
 gi|306569601|gb|ADN03295.1| forkhead box I1 [Homo sapiens]
 gi|306569603|gb|ADN03296.1| forkhead box I1 [Homo sapiens]
 gi|306569605|gb|ADN03297.1| forkhead box I1 [Homo sapiens]
 gi|306569607|gb|ADN03298.1| forkhead box I1 [Homo sapiens]
 gi|306569609|gb|ADN03299.1| forkhead box I1 [Homo sapiens]
 gi|306569611|gb|ADN03300.1| forkhead box I1 [Homo sapiens]
 gi|306569613|gb|ADN03301.1| forkhead box I1 [Homo sapiens]
 gi|306569615|gb|ADN03302.1| forkhead box I1 [Homo sapiens]
 gi|306569617|gb|ADN03303.1| forkhead box I1 [Homo sapiens]
 gi|306569619|gb|ADN03304.1| forkhead box I1 [Homo sapiens]
 gi|306569621|gb|ADN03305.1| forkhead box I1 [Homo sapiens]
 gi|306569623|gb|ADN03306.1| forkhead box I1 [Homo sapiens]
 gi|306569625|gb|ADN03307.1| forkhead box I1 [Homo sapiens]
 gi|306569627|gb|ADN03308.1| forkhead box I1 [Homo sapiens]
 gi|306569629|gb|ADN03309.1| forkhead box I1 [Homo sapiens]
 gi|306569631|gb|ADN03310.1| forkhead box I1 [Homo sapiens]
 gi|306569633|gb|ADN03311.1| forkhead box I1 [Homo sapiens]
 gi|306569635|gb|ADN03312.1| forkhead box I1 [Homo sapiens]
 gi|306569637|gb|ADN03313.1| forkhead box I1 [Homo sapiens]
 gi|306569639|gb|ADN03314.1| forkhead box I1 [Homo sapiens]
 gi|306569641|gb|ADN03315.1| forkhead box I1 [Homo sapiens]
 gi|306569643|gb|ADN03316.1| forkhead box I1 [Homo sapiens]
 gi|306569645|gb|ADN03317.1| forkhead box I1 [Homo sapiens]
 gi|306569647|gb|ADN03318.1| forkhead box I1 [Homo sapiens]
 gi|306569649|gb|ADN03319.1| forkhead box I1 [Homo sapiens]
 gi|306569653|gb|ADN03321.1| forkhead box I1 [Homo sapiens]
 gi|306569655|gb|ADN03322.1| forkhead box I1 [Homo sapiens]
 gi|306569657|gb|ADN03323.1| forkhead box I1 [Homo sapiens]
 gi|306569659|gb|ADN03324.1| forkhead box I1 [Homo sapiens]
 gi|306569661|gb|ADN03325.1| forkhead box I1 [Homo sapiens]
 gi|306569663|gb|ADN03326.1| forkhead box I1 [Homo sapiens]
 gi|306569665|gb|ADN03327.1| forkhead box I1 [Homo sapiens]
 gi|306569667|gb|ADN03328.1| forkhead box I1 [Homo sapiens]
 gi|306569669|gb|ADN03329.1| forkhead box I1 [Homo sapiens]
 gi|306569671|gb|ADN03330.1| forkhead box I1 [Homo sapiens]
 gi|306569673|gb|ADN03331.1| forkhead box I1 [Homo sapiens]
 gi|306569675|gb|ADN03332.1| forkhead box I1 [Homo sapiens]
 gi|306569677|gb|ADN03333.1| forkhead box I1 [Homo sapiens]
 gi|306569679|gb|ADN03334.1| forkhead box I1 [Homo sapiens]
 gi|306569681|gb|ADN03335.1| forkhead box I1 [Homo sapiens]
 gi|306569683|gb|ADN03336.1| forkhead box I1 [Homo sapiens]
          Length = 378

 Score = 62.0 bits (149), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 3/55 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDI 56
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ +  G +R  R++ SD+
Sbjct: 169 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFD-NGNFRRKRKRKSDV 222


>gi|387016000|gb|AFJ50119.1| Forkhead box protein I1-ema-like [Crotalus adamanteus]
          Length = 371

 Score = 62.0 bits (149), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 31/55 (56%), Positives = 38/55 (69%), Gaps = 3/55 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDI 56
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ +  G +R  R+K SD 
Sbjct: 169 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFD-NGNFRRKRKKKSDC 222


>gi|306569651|gb|ADN03320.1| forkhead box I1 [Homo sapiens]
          Length = 378

 Score = 62.0 bits (149), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 3/55 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDI 56
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ +  G +R  R++ SD+
Sbjct: 169 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFD-NGNFRRKRKRKSDV 222


>gi|296193696|ref|XP_002744628.1| PREDICTED: forkhead box protein I1 [Callithrix jacchus]
          Length = 378

 Score = 62.0 bits (149), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 3/55 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDI 56
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ +  G +R  R++ SD+
Sbjct: 169 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFD-NGNFRRKRKRKSDV 222


>gi|291403680|ref|XP_002717978.1| PREDICTED: forkhead box G1-like [Oryctolagus cuniculus]
          Length = 395

 Score = 62.0 bits (149), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+
Sbjct: 59  NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRST 110


>gi|87622886|gb|ABD38852.1| forkhead box G1 [Agama atra]
          Length = 469

 Score = 62.0 bits (149), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+
Sbjct: 207 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRST 258


>gi|440905358|gb|ELR55744.1| Forkhead box protein G1, partial [Bos grunniens mutus]
          Length = 327

 Score = 61.6 bits (148), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+
Sbjct: 65  NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRST 116


>gi|301774126|ref|XP_002922482.1| PREDICTED: forkhead box protein G1-like, partial [Ailuropoda
           melanoleuca]
          Length = 340

 Score = 61.6 bits (148), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+
Sbjct: 78  NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRST 129


>gi|291229466|ref|XP_002734694.1| PREDICTED: fork-head box I transcription factor [Saccoglossus
           kowalevskii]
          Length = 298

 Score = 61.6 bits (148), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 31/51 (60%), Positives = 36/51 (70%), Gaps = 6/51 (11%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRK 52
           NSIRHNLSLN CF KVPRS+D PGKG +W LD   +K+ + G    N RRK
Sbjct: 145 NSIRHNLSLNDCFKKVPRSEDDPGKGNYWMLDPNCEKMFDNG----NFRRK 191


>gi|281337930|gb|EFB13514.1| hypothetical protein PANDA_011464 [Ailuropoda melanoleuca]
          Length = 332

 Score = 61.6 bits (148), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+
Sbjct: 70  NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRST 121


>gi|1082850|pir||A54743 transcription factor HFK1 - human
          Length = 476

 Score = 61.6 bits (148), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+
Sbjct: 215 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRST 266


>gi|403290199|ref|XP_003936217.1| PREDICTED: forkhead box protein I1 [Saimiri boliviensis
           boliviensis]
          Length = 378

 Score = 61.6 bits (148), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 3/55 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDI 56
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ +  G +R  R++ SD+
Sbjct: 169 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFD-NGNFRRKRKRKSDV 222


>gi|74096335|ref|NP_001027657.1| forkhead homolog [Ciona intestinalis]
 gi|2196755|gb|AAB61227.1| forkhead homolog [Ciona intestinalis]
          Length = 587

 Score = 61.6 bits (148), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 63/127 (49%), Gaps = 9/127 (7%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRRKSSDIQHRKQ 61
           NSIRH+LS N CFVKVPRS D+PGKG +W L  D   + E G   R  +R  S+    K+
Sbjct: 177 NSIRHSLSFNDCFVKVPRSADKPGKGSYWSLHPDAGNMFENGCYLRRQKRFKSN----KK 232

Query: 62  AHRPKPAPSENLNTAYTNNNSIAPGENLNKLEDKLDDTLMESEI---SMTDDIDEDLILS 118
           +    P+  E+       N++++P  +++      +      E    S TD+   DL  S
Sbjct: 233 SKGAGPSSDEHSPLELVPNDAVSPPPSMSNPGSTHNSPHNSHETYADSDTDNKSPDLAPS 292

Query: 119 NILLSGD 125
             + S D
Sbjct: 293 TAIPSHD 299


>gi|297676609|ref|XP_002816222.1| PREDICTED: forkhead box protein I1 isoform 1 [Pongo abelii]
          Length = 378

 Score = 61.6 bits (148), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 3/55 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDI 56
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ +  G +R  R++ SD+
Sbjct: 169 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFD-NGNFRRKRKRKSDV 222


>gi|149051192|gb|EDM03365.1| rCG62338 [Rattus norvegicus]
          Length = 299

 Score = 61.6 bits (148), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 4  NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
          NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+
Sbjct: 37 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRST 88


>gi|1911185|gb|AAB50574.1| forkhead box L1 [Homo sapiens]
          Length = 351

 Score = 61.6 bits (148), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 3/55 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDI 56
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ +  G +R  R++ SD+
Sbjct: 142 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFD-NGNFRRKRKRKSDV 195


>gi|241627022|ref|XP_002407977.1| transcription factor, putative [Ixodes scapularis]
 gi|215501107|gb|EEC10601.1| transcription factor, putative [Ixodes scapularis]
          Length = 305

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/60 (53%), Positives = 38/60 (63%), Gaps = 1/60 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSSDIQHRKQA 62
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+     + A
Sbjct: 123 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRSTAASRSRLA 182


>gi|122892611|gb|ABM67367.1| FOXI1 [Hylobates klossii]
          Length = 306

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 3/55 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDI 56
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ +  G +R  R++ SD+
Sbjct: 97  NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFD-NGNFRRKRKRKSDV 150


>gi|440889679|gb|ELR44677.1| Forkhead box protein I1, partial [Bos grunniens mutus]
          Length = 273

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 3/55 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDI 56
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ +  G +R  R++ SD+
Sbjct: 64  NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFD-NGNFRRKRKRKSDV 117


>gi|426350939|ref|XP_004043020.1| PREDICTED: forkhead box protein I1 isoform 1 [Gorilla gorilla
           gorilla]
          Length = 378

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 3/55 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDI 56
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ +  G +R  R++ SD+
Sbjct: 169 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFD-NGNFRRKRKRKSDV 222


>gi|351701158|gb|EHB04077.1| Forkhead box protein I1 [Heterocephalus glaber]
          Length = 379

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 3/55 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDI 56
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ +  G +R  R++ SD+
Sbjct: 170 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFD-NGNFRRKRKRKSDV 223


>gi|183986689|ref|NP_001116933.1| forkhead box G1 [Xenopus (Silurana) tropicalis]
 gi|166796864|gb|AAI59145.1| foxg1 protein [Xenopus (Silurana) tropicalis]
          Length = 432

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+
Sbjct: 170 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRST 221


>gi|121223212|gb|ABM47718.1| FOXI1 [Saguinus labiatus]
          Length = 221

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 3/55 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDI 56
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ +  G +R  R++ SD+
Sbjct: 109 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFD-NGNFRRKRKRKSDV 162


>gi|55625400|ref|XP_527110.1| PREDICTED: forkhead box protein I1 isoform 2 [Pan troglodytes]
          Length = 378

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 3/55 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDI 56
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ +  G +R  R++ SD+
Sbjct: 169 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFD-NGNFRRKRKRKSDV 222


>gi|354473997|ref|XP_003499218.1| PREDICTED: forkhead box protein G1-like [Cricetulus griseus]
          Length = 364

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+
Sbjct: 102 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRST 153


>gi|109129439|ref|XP_001087392.1| PREDICTED: forkhead box protein L1 [Macaca mulatta]
          Length = 230

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/68 (51%), Positives = 40/68 (58%), Gaps = 13/68 (19%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSSDIQHRKQA 62
           NSIRHNLSLN CFVKVPR K +PGKG +W LD + L+    G YR  +RK          
Sbjct: 95  NSIRHNLSLNDCFVKVPREKGRPGKGSYWTLDPRCLDMFENGNYRRRKRK---------- 144

Query: 63  HRPKPAPS 70
             PKP P 
Sbjct: 145 --PKPGPG 150


>gi|47207966|emb|CAF93027.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 310

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 4  NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
          NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+
Sbjct: 36 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRST 87


>gi|397479307|ref|XP_003810966.1| PREDICTED: forkhead box protein I1 isoform 1 [Pan paniscus]
          Length = 378

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 3/55 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDI 56
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ +  G +R  R++ SD+
Sbjct: 169 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFD-NGNFRRKRKRKSDV 222


>gi|321458612|gb|EFX69677.1| hypothetical protein DAPPUDRAFT_8599 [Daphnia pulex]
          Length = 95

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/50 (60%), Positives = 34/50 (68%), Gaps = 1/50 (2%)

Query: 4  NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRK 52
          NSIRHNLSLN CF+KVPR K +PGKG FW LD    +    G YR  +RK
Sbjct: 44 NSIRHNLSLNDCFIKVPREKGRPGKGAFWTLDPACYDMFEAGNYRRRKRK 93


>gi|161511585|gb|ABX71819.1| FOXA [Paracentrotus lividus]
          Length = 436

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 3/64 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR-KSSDIQHRK 60
           NSIRH+LS N CFVKVPR+ D+PGKG FW L  D   + E G   R  +R K    + ++
Sbjct: 188 NSIRHSLSFNDCFVKVPRTPDRPGKGSFWTLHPDAGNMFENGCYLRRQKRFKCPKKEAQR 247

Query: 61  QAHR 64
           QA +
Sbjct: 248 QAQK 251


>gi|87622884|gb|ABD38851.1| forkhead box G1 [Psammobates geometricus]
          Length = 462

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+
Sbjct: 200 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRST 251


>gi|351706061|gb|EHB08980.1| hypothetical protein GW7_16874, partial [Heterocephalus glaber]
          Length = 1507

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 318 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQR 367


>gi|189240413|ref|XP_969795.2| PREDICTED: similar to forkhead box K1 [Tribolium castaneum]
 gi|270011459|gb|EFA07907.1| hypothetical protein TcasGA2_TC005482 [Tribolium castaneum]
          Length = 560

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/50 (60%), Positives = 37/50 (74%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQ---KLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D Q   KL E   R R  R
Sbjct: 317 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPQSESKLIEQAFRRRRQR 366


>gi|50345351|gb|AAT74653.1| forkhead [Ciona intestinalis]
 gi|50345353|gb|AAT74654.1| forkhead [Ciona intestinalis]
 gi|50345359|gb|AAT74657.1| forkhead [Ciona intestinalis]
 gi|50345365|gb|AAT74660.1| forkhead [Ciona intestinalis]
          Length = 362

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 63/127 (49%), Gaps = 9/127 (7%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRRKSSDIQHRKQ 61
           NSIRH+LS N CFVKVPRS D+PGKG +W L  D   + E G   R  +R  S+    K+
Sbjct: 177 NSIRHSLSFNDCFVKVPRSADKPGKGSYWSLHPDAGNMFENGCYLRRQKRFKSN----KK 232

Query: 62  AHRPKPAPSENLNTAYTNNNSIAPGENLNKLEDKLDDTLMESEI---SMTDDIDEDLILS 118
           +    P+  E+       N++++P  +++      +      E    S TD+   DL  S
Sbjct: 233 SKGAGPSSDEHSPLELVPNDAVSPPPSMSNPGSTHNSPHNSHETYADSDTDNKSPDLAPS 292

Query: 119 NILLSGD 125
             + S D
Sbjct: 293 TAITSHD 299


>gi|395817082|ref|XP_003782004.1| PREDICTED: forkhead box protein I1 [Otolemur garnettii]
          Length = 380

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 3/55 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDI 56
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ +  G +R  R++ SD+
Sbjct: 170 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFD-NGNFRRKRKRKSDV 223


>gi|345803900|ref|XP_547758.3| PREDICTED: forkhead box protein G1 [Canis lupus familiaris]
          Length = 315

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+
Sbjct: 53  NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRST 104


>gi|332257775|ref|XP_003277979.1| PREDICTED: forkhead box protein K1 [Nomascus leucogenys]
          Length = 570

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 188 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQR 237


>gi|332239002|ref|XP_003268693.1| PREDICTED: LOW QUALITY PROTEIN: forkhead box protein I1 [Nomascus
           leucogenys]
          Length = 378

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 3/55 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDI 56
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ +  G +R  R++ SD+
Sbjct: 169 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFD-NGNFRRKRKRKSDV 222


>gi|301762173|ref|XP_002916516.1| PREDICTED: uncharacterized protein KIAA0415-like [Ailuropoda
           melanoleuca]
          Length = 1408

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 260 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQR 309


>gi|45383962|ref|NP_990524.1| forkhead box protein G1 [Gallus gallus]
 gi|3023381|sp|Q90964.1|FOXG1_CHICK RecName: Full=Forkhead box protein G1; Short=FoxG1; AltName:
           Full=Brain factor 1; Short=BF-1; Short=BF1; Short=cBF-1;
           AltName: Full=CEQ 3-1; AltName: Full=Forkhead-related
           protein FKHL1; AltName: Full=N-62-5; AltName:
           Full=Proto-oncogene C-QIN
 gi|642603|gb|AAA66954.1| putative [Gallus gallus]
 gi|1546782|gb|AAB08466.1| chicken brain factor-1 [Gallus gallus]
          Length = 451

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+
Sbjct: 189 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRST 240


>gi|516381|emb|CAA52239.1| transcription factor [Homo sapiens]
 gi|1098060|prf||2115219B brain factor 1
          Length = 477

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+
Sbjct: 215 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRST 266


>gi|62203301|gb|AAH92710.1| Forkhead box G1 [Danio rerio]
          Length = 420

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+
Sbjct: 159 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRST 210


>gi|395738072|ref|XP_003777025.1| PREDICTED: forkhead box protein K1 [Pongo abelii]
          Length = 803

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 421 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQR 470


>gi|256996788|emb|CAY90194.1| forkhead transcription factor A [Lytechinus variegatus]
          Length = 440

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 3/64 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR-KSSDIQHRK 60
           NSIRH+LS N CFVKVPR+ D+PGKG FW L  D   + E G   R  +R K    + ++
Sbjct: 191 NSIRHSLSFNDCFVKVPRTPDRPGKGSFWTLHPDAGNMFENGCYLRRQKRFKCPKKEAQR 250

Query: 61  QAHR 64
           QA +
Sbjct: 251 QAQK 254


>gi|410898742|ref|XP_003962856.1| PREDICTED: forkhead box protein G1-like [Takifugu rubripes]
          Length = 424

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+
Sbjct: 153 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRST 204


>gi|432100004|gb|ELK28897.1| Forkhead box protein I1 [Myotis davidii]
          Length = 366

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 3/55 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDI 56
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ +  G +R  R++ SD+
Sbjct: 162 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFD-NGNFRRKRKRKSDV 215


>gi|295656524|gb|ADG26725.1| forkhead box protein G1 [Platynereis dumerilii]
          Length = 328

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/60 (53%), Positives = 38/60 (63%), Gaps = 1/60 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSSDIQHRKQA 62
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+     + A
Sbjct: 164 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRSTAASRSRLA 223


>gi|194219613|ref|XP_001500146.2| PREDICTED: forkhead box protein I1-like [Equus caballus]
          Length = 358

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 3/55 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDI 56
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ +  G +R  R++ SD+
Sbjct: 150 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFD-NGNFRRKRKRKSDV 203


>gi|431918131|gb|ELK17359.1| Forkhead box protein I1 [Pteropus alecto]
          Length = 377

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 3/55 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDI 56
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ +  G +R  R++ SD+
Sbjct: 171 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFD-NGNFRRKRKRKSDV 224


>gi|345305278|ref|XP_003428308.1| PREDICTED: forkhead box protein K1-like [Ornithorhynchus anatinus]
          Length = 868

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 332 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQR 381


>gi|332020766|gb|EGI61170.1| Forkhead box protein K1 [Acromyrmex echinatior]
          Length = 561

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/50 (62%), Positives = 37/50 (74%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQ---KLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FWK+D Q   KL E   R R  R
Sbjct: 319 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWKIDPQSENKLIEQAFRRRRQR 368


>gi|242022659|ref|XP_002431756.1| protein fork head, putative [Pediculus humanus corporis]
 gi|212517081|gb|EEB19018.1| protein fork head, putative [Pediculus humanus corporis]
          Length = 454

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/72 (47%), Positives = 44/72 (61%), Gaps = 6/72 (8%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR-KSSDIQHRK 60
           NSIRH+LS N CFVKVPR+ D+PGKG FW L  D   + E G   R  +R K    +  +
Sbjct: 193 NSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKDEKKEAIR 252

Query: 61  QAHRPKPAPSEN 72
           Q+H+   +PS N
Sbjct: 253 QSHK---SPSHN 261


>gi|190336912|gb|AAI62636.1| Forkhead box I3b [Danio rerio]
 gi|190339436|gb|AAI62346.1| Forkhead box I3b [Danio rerio]
          Length = 383

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/61 (49%), Positives = 39/61 (63%), Gaps = 2/61 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDIQHRKQ 61
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ + G   R  +RKS  +  +  
Sbjct: 176 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRKSDSLPEKSS 235

Query: 62  A 62
           +
Sbjct: 236 S 236


>gi|443726389|gb|ELU13569.1| hypothetical protein CAPTEDRAFT_23732, partial [Capitella teleta]
          Length = 389

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/50 (60%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDL---QKLEEGGGRYRNVR 50
           NSIRHNLSLN+ FVKVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 296 NSIRHNLSLNRYFVKVPRSQEEPGKGSFWRIDPASEAKLTEQAFRRRRQR 345


>gi|38708001|ref|NP_944600.1| forkhead box protein I1 [Danio rerio]
 gi|33087231|gb|AAP92810.1| forkhead transcription factor i3b [Danio rerio]
          Length = 383

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/61 (49%), Positives = 39/61 (63%), Gaps = 2/61 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDIQHRKQ 61
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ + G   R  +RKS  +  +  
Sbjct: 176 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRKSDSLPEKSS 235

Query: 62  A 62
           +
Sbjct: 236 S 236


>gi|190576691|gb|ACE79153.1| winged helix/forkhead transcription factor FoxAB [Branchiostoma
           floridae]
          Length = 386

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/63 (50%), Positives = 35/63 (55%), Gaps = 2/63 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRRKSSDIQHRKQ 61
           NSIRHNLSLN CFVK+PRS +QPGKGG W L  D   +   G   R   R  S      Q
Sbjct: 123 NSIRHNLSLNDCFVKIPRSCEQPGKGGLWALHPDCGNMFAKGSYLRRTARFRSSKTEESQ 182

Query: 62  AHR 64
             R
Sbjct: 183 DGR 185


>gi|348517397|ref|XP_003446220.1| PREDICTED: hepatocyte nuclear factor 3-beta-like [Oreochromis
           niloticus]
 gi|18378127|gb|AAL68498.1|AF251499_1 hepatocyte nuclear factor 3-beta [Oreochromis mossambicus]
          Length = 413

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/54 (55%), Positives = 34/54 (62%), Gaps = 2/54 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRRKSSD 55
           NSIRH+LS N CFVKVPRS D+PGKG FW L  D   + E G   R  +R   D
Sbjct: 196 NSIRHSLSFNDCFVKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCD 249


>gi|300795307|ref|NP_001179172.1| forkhead box protein I1 [Bos taurus]
 gi|296475947|tpg|DAA18062.1| TPA: forkhead box I1-like isoform 1 [Bos taurus]
          Length = 379

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 3/55 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDI 56
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ +  G +R  R++ SD+
Sbjct: 170 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFD-NGNFRRKRKRKSDV 223


>gi|402891533|ref|XP_003909000.1| PREDICTED: forkhead box protein I3 [Papio anubis]
          Length = 549

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/52 (55%), Positives = 36/52 (69%), Gaps = 2/52 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKS 53
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ + G   R  +R+S
Sbjct: 320 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRRS 371


>gi|357628122|gb|EHJ77559.1| forkhead box protein K1 [Danaus plexippus]
          Length = 255

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 24/34 (70%), Positives = 31/34 (91%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQ 37
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D Q
Sbjct: 106 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPQ 139


>gi|322366528|gb|ADW95338.1| FoxG [Paracentrotus lividus]
          Length = 509

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/52 (57%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+++
Sbjct: 235 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRTT 286


>gi|311273948|ref|XP_003134114.1| PREDICTED: forkhead box protein I1 isoform 1 [Sus scrofa]
          Length = 378

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 3/55 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDI 56
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ +  G +R  R++ SD+
Sbjct: 170 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFD-NGNFRRKRKRKSDV 223


>gi|195471175|ref|XP_002087881.1| GE18262 [Drosophila yakuba]
 gi|194173982|gb|EDW87593.1| GE18262 [Drosophila yakuba]
          Length = 324

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/65 (50%), Positives = 39/65 (60%), Gaps = 6/65 (9%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLE----EGGGRYRNVRRKSSDIQHR 59
           NSIRHNLSLNKCF K+PRS D PGKG +W LD    E    E  G+ R  R+     + R
Sbjct: 167 NSIRHNLSLNKCFTKIPRSYDDPGKGNYWILDPSAEEVFIGETTGKLR--RKNPGASRTR 224

Query: 60  KQAHR 64
             A+R
Sbjct: 225 LAAYR 229


>gi|427783311|gb|JAA57107.1| Putative forkhead transcription factor k strongylocentrotus
           purpuratus [Rhipicephalus pulchellus]
          Length = 665

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/50 (62%), Positives = 37/50 (74%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQ---KLEEGGGRYRNVR 50
           NSIRHNLSLN+ FVKVPRS+++PGKG FW++D Q   KL E   R R  R
Sbjct: 318 NSIRHNLSLNRYFVKVPRSQEEPGKGSFWRIDPQSEVKLVEQAFRRRRQR 367


>gi|403287228|ref|XP_003934854.1| PREDICTED: forkhead box protein K1 [Saimiri boliviensis
           boliviensis]
          Length = 652

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 270 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQR 319


>gi|119610206|gb|EAW89800.1| forkhead box K2, isoform CRA_a [Homo sapiens]
          Length = 425

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDL---QKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 115 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPR 164


>gi|432902655|ref|XP_004077031.1| PREDICTED: forkhead box protein G1-like [Oryzias latipes]
          Length = 391

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/62 (51%), Positives = 39/62 (62%), Gaps = 1/62 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSSDIQHRKQA 62
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+  + +   
Sbjct: 162 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRSATSRGKLAM 221

Query: 63  HR 64
            R
Sbjct: 222 KR 223


>gi|427783313|gb|JAA57108.1| Putative forkhead transcription factor k strongylocentrotus
           purpuratus [Rhipicephalus pulchellus]
          Length = 665

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/50 (62%), Positives = 37/50 (74%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQ---KLEEGGGRYRNVR 50
           NSIRHNLSLN+ FVKVPRS+++PGKG FW++D Q   KL E   R R  R
Sbjct: 318 NSIRHNLSLNRYFVKVPRSQEEPGKGSFWRIDPQSEVKLVEQAFRRRRQR 367


>gi|190576677|gb|ACE79146.1| winged helix/forkhead transcription factor FoxK [Branchiostoma
           floridae]
          Length = 615

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQ---KLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 289 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPSCEAKLTEQAWRRRRQR 338


>gi|449274748|gb|EMC83826.1| Forkhead box protein G1, partial [Columba livia]
          Length = 350

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+
Sbjct: 88  NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRST 139


>gi|397503946|ref|XP_003822573.1| PREDICTED: forkhead box protein G1-like [Pan paniscus]
          Length = 437

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+
Sbjct: 175 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRST 226


>gi|355778496|gb|EHH63532.1| hypothetical protein EGM_16519, partial [Macaca fascicularis]
          Length = 319

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+
Sbjct: 57  NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRST 108


>gi|194855832|ref|XP_001968625.1| GG24971 [Drosophila erecta]
 gi|190660492|gb|EDV57684.1| GG24971 [Drosophila erecta]
          Length = 323

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/65 (50%), Positives = 39/65 (60%), Gaps = 6/65 (9%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLE----EGGGRYRNVRRKSSDIQHR 59
           NSIRHNLSLNKCF K+PRS D PGKG +W LD    E    E  G+ R  R+     + R
Sbjct: 167 NSIRHNLSLNKCFTKIPRSYDDPGKGNYWILDPSAEEVFIGETTGKLR--RKNPGASRTR 224

Query: 60  KQAHR 64
             A+R
Sbjct: 225 LAAYR 229


>gi|193788673|ref|NP_001123284.1| forkhead transcription factor G [Strongylocentrotus purpuratus]
 gi|167859074|gb|ACA04472.1| FoxG [Strongylocentrotus purpuratus]
          Length = 507

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/52 (57%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+++
Sbjct: 233 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRTT 284


>gi|18858707|ref|NP_571142.1| forkhead box protein G1 [Danio rerio]
 gi|3171241|gb|AAC18393.1| transcription factor BF-1 [Danio rerio]
          Length = 420

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+
Sbjct: 159 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRST 210


>gi|193784107|dbj|BAG53651.1| unnamed protein product [Homo sapiens]
          Length = 488

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 115 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQR 164


>gi|149755374|ref|XP_001492901.1| PREDICTED: forkhead box protein K1 [Equus caballus]
          Length = 585

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 204 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQR 253


>gi|426355379|ref|XP_004045101.1| PREDICTED: forkhead box protein K1 [Gorilla gorilla gorilla]
          Length = 570

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 188 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQR 237


>gi|359079935|ref|XP_003587905.1| PREDICTED: forkhead box protein K1 [Bos taurus]
          Length = 768

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 394 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQR 443


>gi|332246836|ref|XP_003272561.1| PREDICTED: forkhead box protein C2 [Nomascus leucogenys]
          Length = 312

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 50/94 (53%), Gaps = 5/94 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVRRKSSDIQHRK 60
           NSIRHNLSLN+CFVKVPR   +PGKG +W LD       E G    R  R K  D+   K
Sbjct: 118 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVSKEK 177

Query: 61  Q--AHRPKPAPSENLNTAYTNNNSIAPGENLNKL 92
           +  AH  +P P+ +       + + AP E   K+
Sbjct: 178 EERAHLKEPPPAASKGAPAAPHLADAPKEAEKKV 211


>gi|358419037|ref|XP_003584106.1| PREDICTED: forkhead box protein K1 [Bos taurus]
          Length = 768

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 394 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQR 443


>gi|426376614|ref|XP_004055090.1| PREDICTED: forkhead box protein G1 [Gorilla gorilla gorilla]
          Length = 439

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+
Sbjct: 177 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRST 228


>gi|395503647|ref|XP_003756175.1| PREDICTED: forkhead box protein G1-like [Sarcophilus harrisii]
          Length = 565

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+
Sbjct: 303 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRST 354


>gi|119597477|gb|EAW77071.1| hCG33270 [Homo sapiens]
          Length = 516

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/52 (55%), Positives = 36/52 (69%), Gaps = 2/52 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKS 53
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ + G   R  +R+S
Sbjct: 49  NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRRS 100


>gi|50345337|gb|AAT74646.1| forkhead [Ciona intestinalis]
          Length = 361

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 9/130 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRRKSSDIQHRKQ 61
           NSIRH+LS N CFVKVPRS D+PGKG +W L  D   + E G   R  +R  S+    K+
Sbjct: 177 NSIRHSLSFNDCFVKVPRSADKPGKGSYWSLHPDAGNMFENGCYLRRQKRFKSN----KK 232

Query: 62  AHRPKPAPSENLNTAYTNNNSIAPGENLNKLEDKLDDTLMESEISMTDDIDE---DLILS 118
           +    P+  E+       N++++P  +++      +      E     D D    DL  S
Sbjct: 233 SKGAGPSSDEHSPLELVPNDAVSPPPSMSNPGSTHNSPHNSQETYADSDADNKSPDLASS 292

Query: 119 NILLSGDSYW 128
             + S D  +
Sbjct: 293 TAITSHDQLY 302


>gi|281343128|gb|EFB18712.1| hypothetical protein PANDA_004585 [Ailuropoda melanoleuca]
          Length = 606

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 229 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQR 278


>gi|119615821|gb|EAW95415.1| forkhead box C2 (MFH-1, mesenchyme forkhead 1), isoform CRA_a [Homo
           sapiens]
          Length = 377

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/94 (42%), Positives = 51/94 (54%), Gaps = 5/94 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVRRKSSDIQHRK 60
           NSIRHNLSLN+CFVKVPR   +PGKG +W LD       E G    R  R K  D+   K
Sbjct: 34  NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVSKEK 93

Query: 61  Q--AHRPKPAPSENLNTAYTNNNSIAPGENLNKL 92
           +  AH  +P P+ +     T + + AP E   K+
Sbjct: 94  EERAHLKEPPPAASKGAPATPHLADAPKEAEKKV 127


>gi|351712851|gb|EHB15770.1| Forkhead box protein G1 [Heterocephalus glaber]
          Length = 398

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+
Sbjct: 136 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRST 187


>gi|350581381|ref|XP_003481025.1| PREDICTED: forkhead box protein K1-like [Sus scrofa]
          Length = 674

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 288 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQR 337


>gi|384501562|gb|EIE92053.1| hypothetical protein RO3G_16764 [Rhizopus delemar RA 99-880]
          Length = 311

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 24/40 (60%), Positives = 31/40 (77%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEGG 43
           NSIRHNLSLNK FV+VPR  ++PGKG +W+LD Q ++   
Sbjct: 138 NSIRHNLSLNKSFVRVPRPVNEPGKGAYWQLDYQSVQPNA 177


>gi|327259387|ref|XP_003214519.1| PREDICTED: forkhead box protein G1-like [Anolis carolinensis]
          Length = 482

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+
Sbjct: 203 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRST 254


>gi|322802708|gb|EFZ22925.1| hypothetical protein SINV_00202 [Solenopsis invicta]
          Length = 535

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/50 (62%), Positives = 37/50 (74%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQ---KLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FWK+D Q   KL E   R R  R
Sbjct: 293 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWKIDPQSETKLIEQAFRRRRQR 342


>gi|50345367|gb|AAT74661.1| forkhead [Ciona intestinalis]
          Length = 362

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 63/127 (49%), Gaps = 9/127 (7%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRRKSSDIQHRKQ 61
           NSIRH+LS N CFVKVPRS D+PGKG +W L  D   + E G   R  +R  S+    K+
Sbjct: 177 NSIRHSLSFNDCFVKVPRSADKPGKGSYWSLHPDAGNMFENGCYLRRQKRFKSN----KK 232

Query: 62  AHRPKPAPSENLNTAYTNNNSIAPGENLNKLEDKLDDTLMESEI---SMTDDIDEDLILS 118
           +    P+  E+       N++++P  +++      +      E    S TD+   DL  S
Sbjct: 233 SKGAGPSSDEHSPLELVPNDAVSPPPSMSNPGSTHNSPHNSHETYADSDTDNKSPDLAPS 292

Query: 119 NILLSGD 125
             + S D
Sbjct: 293 TAIPSHD 299


>gi|410984301|ref|XP_003998468.1| PREDICTED: forkhead box protein K1 [Felis catus]
          Length = 654

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 276 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQR 325


>gi|332864597|ref|XP_003318328.1| PREDICTED: forkhead box protein K1 [Pan troglodytes]
          Length = 733

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 351 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQR 400


>gi|82546824|ref|NP_001032242.1| forkhead box protein K1 [Homo sapiens]
 gi|118572324|sp|P85037.1|FOXK1_HUMAN RecName: Full=Forkhead box protein K1; AltName: Full=Myocyte
           nuclear factor; Short=MNF
          Length = 733

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 351 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQR 400


>gi|11178689|gb|AAG32544.2| transcription factor Qin [Avian sarcoma virus 31]
          Length = 395

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+
Sbjct: 197 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTDKLRRRST 248


>gi|405967051|gb|EKC32265.1| Forkhead box protein K1 [Crassostrea gigas]
          Length = 636

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/32 (78%), Positives = 30/32 (93%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLN+ FVKVPRS+D+PGKG FW++D
Sbjct: 296 NSIRHNLSLNRYFVKVPRSQDEPGKGSFWRID 327


>gi|3024490|sp|P56260.1|QIN_AVIS3 RecName: Full=Transforming protein Qin; AltName: Full=Oncogene Qin
          Length = 387

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+
Sbjct: 189 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTDKLRRRST 240


>gi|444729494|gb|ELW69907.1| Forkhead box protein K1 [Tupaia chinensis]
          Length = 649

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 279 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQR 328


>gi|410922703|ref|XP_003974822.1| PREDICTED: forkhead box protein B2-like [Takifugu rubripes]
          Length = 318

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 52/102 (50%), Gaps = 13/102 (12%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR---------- 51
           NS+RHNLS N CF+K+PR  DQPGKG FW L  D   + E G   R  +R          
Sbjct: 59  NSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPDCGDMFENGSFLRRRKRFKVQRAEHMT 118

Query: 52  -KSSDIQHRKQAHRPKPAPSENLNTAYTNNNSIAPGENLNKL 92
            KSS + H    H      S+   T+  +++S+AP   + +L
Sbjct: 119 CKSSQMMHYFHHHHHHHTGSKLGATSGHHDSSVAPVSTVGRL 160


>gi|348517146|ref|XP_003446096.1| PREDICTED: forkhead box protein B2-like [Oreochromis niloticus]
          Length = 318

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/102 (38%), Positives = 51/102 (50%), Gaps = 15/102 (14%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR---------- 51
           NS+RHNLS N CF+K+PR  DQPGKG FW L  D   + E G   R  +R          
Sbjct: 59  NSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPDCGDMFENGSFLRRRKRFKVLRAEHMT 118

Query: 52  -KSSDIQHRKQAHRPKPAPSENLNTAYTNNNSIAPGENLNKL 92
            KSS + H    H   P     L TA ++++  A   N+ +L
Sbjct: 119 CKSSPMMHYFHHHHHHPG--SKLGTASSHHDHSAAPPNVGRL 158


>gi|253683453|ref|NP_001156630.1| forkhead box G1 [Oryzias latipes]
 gi|226441728|gb|ACO57466.1| forkhead box G1 [Oryzias latipes]
          Length = 348

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+
Sbjct: 105 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRST 156


>gi|395845640|ref|XP_003795534.1| PREDICTED: forkhead box protein K1 [Otolemur garnettii]
          Length = 1042

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 659 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQR 708


>gi|391348111|ref|XP_003748295.1| PREDICTED: uncharacterized protein LOC100909139 [Metaseiulus
           occidentalis]
          Length = 324

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/52 (55%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
           NSIRHNLSLNKCF+KVPR  D PGKG +W LD    +   GG    +RR+++
Sbjct: 153 NSIRHNLSLNKCFIKVPRHYDDPGKGNYWMLDPSADDVFIGGTTGKLRRRTA 204


>gi|119607697|gb|EAW87291.1| forkhead box K1 [Homo sapiens]
          Length = 616

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 234 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQR 283


>gi|426255460|ref|XP_004021366.1| PREDICTED: forkhead box protein K1, partial [Ovis aries]
          Length = 733

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 259 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQR 308


>gi|326928945|ref|XP_003210633.1| PREDICTED: forkhead box protein K1-like [Meleagris gallopavo]
          Length = 665

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 303 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQR 352


>gi|417412094|gb|JAA52460.1| Putative forkhead/hnf-3-related transcription factor, partial
           [Desmodus rotundus]
          Length = 643

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 257 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQR 306


>gi|410922008|ref|XP_003974475.1| PREDICTED: forkhead box C1-A-like [Takifugu rubripes]
          Length = 480

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/66 (50%), Positives = 39/66 (59%), Gaps = 3/66 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVRRKSSDIQHRK 60
           NSIRHNLSLN+CFVKVPR   +PGKG +W LD       E G    R  R K  D+Q  K
Sbjct: 118 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVQKEK 177

Query: 61  QAHRPK 66
           +  + K
Sbjct: 178 EERQEK 183


>gi|449282508|gb|EMC89341.1| Forkhead box protein C2, partial [Columba livia]
          Length = 463

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/74 (41%), Positives = 44/74 (59%), Gaps = 10/74 (13%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQ--KLEEGGG--------RYRNVRRKS 53
           NSIRHNLSLN+CFVKVPR   +PGKG +W LD     + E G         + ++V ++ 
Sbjct: 118 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVSKEK 177

Query: 54  SDIQHRKQAHRPKP 67
            + + R  + +PKP
Sbjct: 178 EEARERLLSEQPKP 191


>gi|12657603|dbj|BAB21570.1| transcription factor Foxa2 [Colisa lalia]
          Length = 415

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/54 (55%), Positives = 34/54 (62%), Gaps = 2/54 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRRKSSD 55
           NSIRH+LS N CFVKVPRS D+PGKG FW L  D   + E G   R  +R   D
Sbjct: 196 NSIRHSLSFNDCFVKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCD 249


>gi|476976|pir||A47446 HNF-3/fork head family transcription factor Qin - avian sarcoma
           virus 31
          Length = 387

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+
Sbjct: 197 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTDKLRRRST 248


>gi|410900666|ref|XP_003963817.1| PREDICTED: forkhead box protein G1-like [Takifugu rubripes]
          Length = 405

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/62 (51%), Positives = 39/62 (62%), Gaps = 1/62 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSSDIQHRKQA 62
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+  + +   
Sbjct: 156 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRSATSRGKLAM 215

Query: 63  HR 64
            R
Sbjct: 216 KR 217


>gi|167466209|ref|NP_001034503.2| fork head [Tribolium castaneum]
 gi|270008139|gb|EFA04587.1| fork head [Tribolium castaneum]
          Length = 431

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 33/50 (66%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR 51
           NSIRH+LS N CFVKVPR+ D+PGKG FW L  D   + E G   R  +R
Sbjct: 186 NSIRHSLSFNDCFVKVPRTPDKPGKGSFWSLHPDSGNMFENGCYLRRQKR 235


>gi|50345357|gb|AAT74656.1| forkhead [Ciona intestinalis]
 gi|50345361|gb|AAT74658.1| forkhead [Ciona intestinalis]
          Length = 362

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 63/127 (49%), Gaps = 9/127 (7%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRRKSSDIQHRKQ 61
           NSIRH+LS N CFVKVPRS D+PGKG +W L  D   + E G   R  +R  S+    K+
Sbjct: 177 NSIRHSLSFNDCFVKVPRSADKPGKGSYWSLHPDAGNMFENGCYLRRQKRFKSN----KK 232

Query: 62  AHRPKPAPSENLNTAYTNNNSIAPGENLNKLEDKLDDTLMESEI---SMTDDIDEDLILS 118
           +    P+  E+       N++++P  +++      +      E    S TD+   DL  S
Sbjct: 233 SKGAGPSSDEHSPLELVPNDAVSPPPSMSNPGSTHNSPHNSHETYADSDTDNKSPDLAPS 292

Query: 119 NILLSGD 125
             + S D
Sbjct: 293 TAIPSHD 299


>gi|17136486|ref|NP_476730.1| sloppy paired 1 [Drosophila melanogaster]
 gi|8619|emb|CAA46890.1| sp1 protein [Drosophila melanogaster]
 gi|7295755|gb|AAF51058.1| sloppy paired 1 [Drosophila melanogaster]
 gi|15010440|gb|AAK77268.1| GH04704p [Drosophila melanogaster]
 gi|220942250|gb|ACL83668.1| slp1-PA [synthetic construct]
 gi|220952462|gb|ACL88774.1| slp1-PA [synthetic construct]
          Length = 322

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 25/32 (78%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCF K+PRS D PGKG +W LD
Sbjct: 166 NSIRHNLSLNKCFTKIPRSYDDPGKGNYWILD 197


>gi|50345355|gb|AAT74655.1| forkhead [Ciona intestinalis]
          Length = 362

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 63/127 (49%), Gaps = 9/127 (7%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRRKSSDIQHRKQ 61
           NSIRH+LS N CFVKVPRS D+PGKG +W L  D   + E G   R  +R  S+    K+
Sbjct: 177 NSIRHSLSFNDCFVKVPRSADKPGKGSYWSLHPDAGNMFENGCYLRRQKRFKSN----KK 232

Query: 62  AHRPKPAPSENLNTAYTNNNSIAPGENLNKLEDKLDDTLMESEI---SMTDDIDEDLILS 118
           +    P+  E+       N++++P  +++      +      E    S TD+   DL  S
Sbjct: 233 SKGAGPSSDEHSPLELVPNDAVSPPPSMSNPGSTHNSPHNSHETYADSDTDNKSPDLAPS 292

Query: 119 NILLSGD 125
             + S D
Sbjct: 293 TAIPSHD 299


>gi|348041298|ref|NP_998079.2| forkhead box G1b [Danio rerio]
          Length = 341

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+
Sbjct: 123 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRSA 174


>gi|28204898|gb|AAH46369.1| Foxk2 protein [Xenopus laevis]
          Length = 642

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 265 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLVEQAFRKRRPR 314


>gi|345801456|ref|XP_547003.3| PREDICTED: forkhead box protein K1 [Canis lupus familiaris]
          Length = 669

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 292 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQR 341


>gi|297694857|ref|XP_002824685.1| PREDICTED: forkhead box protein G1 [Pongo abelii]
          Length = 634

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+
Sbjct: 372 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRST 423


>gi|195435021|ref|XP_002065500.1| GK15483 [Drosophila willistoni]
 gi|194161585|gb|EDW76486.1| GK15483 [Drosophila willistoni]
          Length = 346

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/65 (50%), Positives = 39/65 (60%), Gaps = 6/65 (9%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLE----EGGGRYRNVRRKSSDIQHR 59
           NSIRHNLSLNKCF K+PRS D PGKG +W LD    E    E  G+ R  R+     + R
Sbjct: 186 NSIRHNLSLNKCFTKIPRSYDDPGKGNYWILDPSAEEVFIGETTGKLR--RKNPGASRTR 243

Query: 60  KQAHR 64
             A+R
Sbjct: 244 LAAYR 248


>gi|19115184|ref|NP_594272.1| fork head transcription factor Fhl1 [Schizosaccharomyces pombe
           972h-]
 gi|26401560|sp|O14270.2|FHL1_SCHPO RecName: Full=Fork head transcription factor 1
 gi|7211056|emb|CAB77015.1| fork head transcription factor Fhl1 [Schizosaccharomyces pombe]
          Length = 743

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 54/117 (46%), Gaps = 2/117 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEGGGRYRNVRRKSSDIQHRKQAH 63
           NSIRHNLSLNK F+++PR +++PGKG FW LD   +++  G +   RR          A 
Sbjct: 337 NSIRHNLSLNKAFIRIPRRQNEPGKGSFWMLDPSYIDQFEGNF--FRRTKKPTPSATPAA 394

Query: 64  RPKPAPSENLNTAYTNNNSIAPGENLNKLEDKLDDTLMESEISMTDDIDEDLILSNI 120
            P  A    L    T   S    E LN  ++        S     +D  + L+ + I
Sbjct: 395 HPDTARENELAAIQTKGISAGKTEQLNPQKETSRSKTHTSRGENVEDRPQSLLQNGI 451


>gi|348568330|ref|XP_003469951.1| PREDICTED: forkhead box protein K1-like [Cavia porcellus]
          Length = 617

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 235 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQR 284


>gi|327291362|ref|XP_003230390.1| PREDICTED: forkhead box protein C2-like [Anolis carolinensis]
          Length = 486

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/92 (41%), Positives = 47/92 (51%), Gaps = 11/92 (11%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVRRKSSDIQHRK 60
           NSIRHNLSLN+CFVKVPR   +PGKG +W LD       E G    R  R K  D+   K
Sbjct: 121 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVSKEK 180

Query: 61  QAHR-------PKPAPSENLNTAYTNNNSIAP 85
           +          PK  P    N +  ++N +AP
Sbjct: 181 EERAVGKGDPLPKGEPGSKPNQS-ASSNIVAP 211


>gi|118572326|sp|Q7ZX03.2|FOXK2_XENLA RecName: Full=Forkhead box protein K2; Short=FoxK2; AltName:
           Full=Interleukin enhancer-binding factor 1; Short=ILF1;
           Short=xFoxK1
          Length = 642

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 265 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLVEQAFRKRRPR 314


>gi|402862800|ref|XP_003895730.1| PREDICTED: forkhead box protein K1, partial [Papio anubis]
          Length = 665

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 283 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQR 332


>gi|195342362|ref|XP_002037770.1| GM18442 [Drosophila sechellia]
 gi|194132620|gb|EDW54188.1| GM18442 [Drosophila sechellia]
          Length = 322

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/32 (78%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCF K+PRS D PGKG +W LD
Sbjct: 166 NSIRHNLSLNKCFTKIPRSYDDPGKGNYWILD 197


>gi|195118594|ref|XP_002003821.1| GI18113 [Drosophila mojavensis]
 gi|193914396|gb|EDW13263.1| GI18113 [Drosophila mojavensis]
          Length = 342

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/65 (50%), Positives = 39/65 (60%), Gaps = 6/65 (9%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLE----EGGGRYRNVRRKSSDIQHR 59
           NSIRHNLSLNKCF K+PRS D PGKG +W LD    E    E  G+ R  R+     + R
Sbjct: 170 NSIRHNLSLNKCFTKIPRSYDDPGKGNYWILDPSAEEVFIGETTGKLR--RKNPGASRTR 227

Query: 60  KQAHR 64
             A+R
Sbjct: 228 LAAYR 232


>gi|190576687|gb|ACE79151.1| winged helix/forkhead transcription factor FoxAB [Branchiostoma
           floridae]
          Length = 346

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/31 (80%), Positives = 27/31 (87%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL 34
           NSIRHNLSLN CFVK+PRS +QPGKGG W L
Sbjct: 124 NSIRHNLSLNDCFVKIPRSCEQPGKGGLWAL 154


>gi|45709947|gb|AAH67725.1| Zgc:85969 [Danio rerio]
          Length = 333

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+
Sbjct: 115 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRSA 166


>gi|401089|sp|P32030.1|SLP1_DROME RecName: Full=Fork head domain transcription factor slp1; AltName:
           Full=Sloppy paired locus protein 1
 gi|8617|emb|CAA46889.1| sp1 protein [Drosophila melanogaster]
          Length = 322

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/32 (78%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCF K+PRS D PGKG +W LD
Sbjct: 166 NSIRHNLSLNKCFTKIPRSYDDPGKGNYWILD 197


>gi|355560431|gb|EHH17117.1| hypothetical protein EGK_13435, partial [Macaca mulatta]
          Length = 547

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 165 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQR 214


>gi|190576689|gb|ACE79152.1| winged helix/forkhead transcription factor FoxAB [Branchiostoma
           floridae]
          Length = 345

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/31 (80%), Positives = 27/31 (87%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL 34
           NSIRHNLSLN CFVK+PRS +QPGKGG W L
Sbjct: 123 NSIRHNLSLNDCFVKIPRSCEQPGKGGLWAL 153


>gi|402594249|gb|EJW88175.1| fork head domain-containing protein [Wuchereria bancrofti]
          Length = 303

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 33/50 (66%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR 51
           NSIRH+LS N CFVKVPR+ D+PGKG FW L  D   + E G   R  +R
Sbjct: 58  NSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHEDCGNMFENGCYLRRQKR 107


>gi|397498089|ref|XP_003819825.1| PREDICTED: forkhead box protein K1 [Pan paniscus]
          Length = 637

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 255 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQR 304


>gi|194758645|ref|XP_001961572.1| GF15038 [Drosophila ananassae]
 gi|190615269|gb|EDV30793.1| GF15038 [Drosophila ananassae]
          Length = 350

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/65 (50%), Positives = 39/65 (60%), Gaps = 6/65 (9%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLE----EGGGRYRNVRRKSSDIQHR 59
           NSIRHNLSLNKCF K+PRS D PGKG +W LD    E    E  G+ R  R+     + R
Sbjct: 177 NSIRHNLSLNKCFTKIPRSYDDPGKGNYWILDPSAEEVFIGETTGKLR--RKNPGASRTR 234

Query: 60  KQAHR 64
             A+R
Sbjct: 235 LAAYR 239


>gi|348536502|ref|XP_003455735.1| PREDICTED: forkhead box protein G1-like [Oreochromis niloticus]
          Length = 308

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/62 (51%), Positives = 39/62 (62%), Gaps = 1/62 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSSDIQHRKQA 62
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+  + +   
Sbjct: 126 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRSATSRGKLAM 185

Query: 63  HR 64
            R
Sbjct: 186 KR 187


>gi|291387800|ref|XP_002710417.1| PREDICTED: forkhead box I1 isoform 1 [Oryctolagus cuniculus]
          Length = 375

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/52 (57%), Positives = 36/52 (69%), Gaps = 2/52 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKS 53
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ + G   R  +RKS
Sbjct: 170 NSIRHNLSLNDCFKKVPREEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRKS 221


>gi|156388131|ref|XP_001634555.1| predicted protein [Nematostella vectensis]
 gi|156221639|gb|EDO42492.1| predicted protein [Nematostella vectensis]
          Length = 286

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/61 (50%), Positives = 37/61 (60%), Gaps = 6/61 (9%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR----KSSDIQ 57
           NSIRH+LS N CFVKVPRS D+PGKG +W L  D   + E G   R  +R    K  D+ 
Sbjct: 86  NSIRHSLSFNDCFVKVPRSPDRPGKGSYWTLHPDCGNMFENGCYLRRQKRFKAEKKPDLS 145

Query: 58  H 58
           H
Sbjct: 146 H 146


>gi|38569871|gb|AAR24453.1| fork head transcription factor [Nematostella vectensis]
          Length = 285

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/61 (50%), Positives = 37/61 (60%), Gaps = 6/61 (9%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR----KSSDIQ 57
           NSIRH+LS N CFVKVPRS D+PGKG +W L  D   + E G   R  +R    K  D+ 
Sbjct: 85  NSIRHSLSFNDCFVKVPRSPDRPGKGSYWTLHPDCGNMFENGCYLRRQKRFKAEKKPDLS 144

Query: 58  H 58
           H
Sbjct: 145 H 145


>gi|47216800|emb|CAG10122.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 387

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/52 (57%), Positives = 36/52 (69%), Gaps = 2/52 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKS 53
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ + G   R  +RKS
Sbjct: 178 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRKS 229


>gi|198474402|ref|XP_001356670.2| GA14117 [Drosophila pseudoobscura pseudoobscura]
 gi|198138376|gb|EAL33735.2| GA14117 [Drosophila pseudoobscura pseudoobscura]
          Length = 347

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/65 (50%), Positives = 39/65 (60%), Gaps = 6/65 (9%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLE----EGGGRYRNVRRKSSDIQHR 59
           NSIRHNLSLNKCF K+PRS D PGKG +W LD    E    E  G+ R  R+     + R
Sbjct: 183 NSIRHNLSLNKCFTKIPRSYDDPGKGNYWILDPSAEEVFIGETTGKLR--RKNPGASRTR 240

Query: 60  KQAHR 64
             A+R
Sbjct: 241 LAAYR 245


>gi|169790884|ref|NP_001116096.1| uncharacterized protein LOC100142648 [Danio rerio]
 gi|166796366|gb|AAI59266.1| Zgc:175247 protein [Danio rerio]
          Length = 316

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+
Sbjct: 108 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRSA 159


>gi|156366825|ref|XP_001627122.1| predicted protein [Nematostella vectensis]
 gi|74419006|gb|ABA03228.1| forkhead domain protein 1 [Nematostella vectensis]
 gi|156214022|gb|EDO35022.1| predicted protein [Nematostella vectensis]
          Length = 285

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/59 (52%), Positives = 37/59 (62%), Gaps = 2/59 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDIQHRK 60
           NSIRHNLSLN+CFVKV R K  PGKG +W LD   +++ E G  +R  R K   I   K
Sbjct: 108 NSIRHNLSLNRCFVKVHREKADPGKGCYWTLDPAYEEMFEDGKYWRRRRTKKPKITSEK 166


>gi|195147970|ref|XP_002014947.1| GL18682 [Drosophila persimilis]
 gi|194106900|gb|EDW28943.1| GL18682 [Drosophila persimilis]
          Length = 342

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/65 (50%), Positives = 39/65 (60%), Gaps = 6/65 (9%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLE----EGGGRYRNVRRKSSDIQHR 59
           NSIRHNLSLNKCF K+PRS D PGKG +W LD    E    E  G+ R  R+     + R
Sbjct: 178 NSIRHNLSLNKCFTKIPRSYDDPGKGNYWILDPSAEEVFIGETTGKLR--RKNPGASRTR 235

Query: 60  KQAHR 64
             A+R
Sbjct: 236 LAAYR 240


>gi|449472218|ref|XP_002196143.2| PREDICTED: forkhead box protein C2 [Taeniopygia guttata]
          Length = 489

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/74 (41%), Positives = 43/74 (58%), Gaps = 10/74 (13%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQ--KLEEGGG--------RYRNVRRKS 53
           NSIRHNLSLN+CFVKVPR   +PGKG +W LD     + E G         + ++V ++ 
Sbjct: 119 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVSKEK 178

Query: 54  SDIQHRKQAHRPKP 67
            + + R    +PKP
Sbjct: 179 EEARERLLKEQPKP 192


>gi|345329957|ref|XP_003431451.1| PREDICTED: hypothetical protein LOC100077216 [Ornithorhynchus
           anatinus]
          Length = 558

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/71 (47%), Positives = 40/71 (56%), Gaps = 5/71 (7%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVRRKSSDIQHRK 60
           NSIRHNLSLN+CFVKVPR   +PGKG +W LD       E G    R  R K  D+   K
Sbjct: 159 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVPKDK 218

Query: 61  Q--AHRPKPAP 69
           +   H  +P P
Sbjct: 219 EERGHPKEPGP 229


>gi|8096683|gb|AAF71998.1|AF217810_1 fork head orthologue [Tribolium castaneum]
          Length = 431

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 33/50 (66%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR 51
           NSIRH+LS N CFVKVPR+ D+PGKG FW L  D   + E G   R  +R
Sbjct: 186 NSIRHSLSFNDCFVKVPRTPDKPGKGSFWSLHPDSGNMFENGCYLRRQKR 235


>gi|3421459|gb|AAC32225.1| ForkHead 1 [Molgula occulta]
          Length = 568

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 33/50 (66%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR 51
           NSIRH+LS N CFVKVPRS D+PGKG +W L  D   + E G   R  +R
Sbjct: 163 NSIRHSLSFNDCFVKVPRSPDKPGKGSYWSLHPDAGNMFENGCYLRRQKR 212


>gi|355750411|gb|EHH54749.1| hypothetical protein EGM_15643 [Macaca fascicularis]
          Length = 350

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 3/55 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDI 56
           NSIRHNLSLN CF KVPR  D PGKG +W LD   +K+ +  G +R  R++ SD+
Sbjct: 141 NSIRHNLSLNDCFKKVPRDDDDPGKGNYWTLDPNCEKMFD-NGNFRRKRKRKSDV 194


>gi|195576446|ref|XP_002078087.1| GD23260 [Drosophila simulans]
 gi|194190096|gb|EDX03672.1| GD23260 [Drosophila simulans]
          Length = 322

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/32 (78%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCF K+PRS D PGKG +W LD
Sbjct: 166 NSIRHNLSLNKCFTKIPRSYDDPGKGNYWILD 197


>gi|109079702|ref|XP_001092246.1| PREDICTED: forkhead box protein I1 isoform 2 [Macaca mulatta]
 gi|402873365|ref|XP_003900548.1| PREDICTED: forkhead box protein I1 [Papio anubis]
          Length = 378

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 3/55 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDI 56
           NSIRHNLSLN CF KVPR  D PGKG +W LD   +K+ +  G +R  R++ SD+
Sbjct: 169 NSIRHNLSLNDCFKKVPRDDDDPGKGNYWTLDPNCEKMFD-NGNFRRKRKRKSDV 222


>gi|516383|emb|CAA52240.1| transcription factor [Homo sapiens]
 gi|967048|emb|CAA55038.1| HBF-G2 (HFK-2) [Homo sapiens]
 gi|1098059|prf||2115219A brain factor 2
          Length = 469

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/32 (81%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD
Sbjct: 208 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLD 239


>gi|118601056|ref|NP_001073010.1| forkhead transcription factor A [Strongylocentrotus purpuratus]
 gi|91983614|gb|ABE68834.1| forkhead transcription factor A [Strongylocentrotus purpuratus]
          Length = 440

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 33/50 (66%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR 51
           NSIRH+LS N CFVKVPR+ D+PGKG FW L  D   + E G   R  +R
Sbjct: 190 NSIRHSLSFNDCFVKVPRTPDRPGKGSFWTLHPDAGNMFENGCYLRRQKR 239


>gi|444727695|gb|ELW68173.1| Forkhead box protein K2 [Tupaia chinensis]
          Length = 706

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 322 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLLEQAFRKRRPR 371


>gi|429962207|gb|ELA41751.1| hypothetical protein VICG_01255 [Vittaforma corneae ATCC 50505]
          Length = 197

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 61/106 (57%), Gaps = 16/106 (15%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEGGGRYRNVRRKSSDIQHRKQAH 63
           NSIRHNLSLN+CF KVPR  ++ GKG +WK++ +        ++NV+    + + R+ ++
Sbjct: 77  NSIRHNLSLNRCFYKVPRGTEKKGKGAYWKINYE--------FQNVK---VNYRSRRYSY 125

Query: 64  RPKP-APSENLNTAYTNNNSIAPGENLNKLEDK----LDDTLMESE 104
           +P P A  E+L+    +N  I+    +N++  K     +  L+E E
Sbjct: 126 KPMPQATIESLSEILNDNKLISENIGVNEIPYKQTTVFNGNLLEGE 171


>gi|33087229|gb|AAP92809.1| forkhead transcription factor i3 [Danio rerio]
          Length = 353

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/61 (49%), Positives = 40/61 (65%), Gaps = 3/61 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDIQHRKQ 61
           NSIRHNLSLN CF+KVPR    PGKG +W LD   +K+ +  G +R  R++ SD Q  ++
Sbjct: 162 NSIRHNLSLNDCFMKVPRDDSDPGKGNYWTLDPNCEKMFD-NGNFRRKRKRKSDSQAEEE 220

Query: 62  A 62
            
Sbjct: 221 G 221


>gi|198436541|ref|XP_002124582.1| PREDICTED: transcription factor protein [Ciona intestinalis]
          Length = 583

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 33/50 (66%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR 51
           NSIRH+LS N CFVKVPRS D+PGKG +W L  D   + E G   R  +R
Sbjct: 170 NSIRHSLSFNDCFVKVPRSPDKPGKGSYWSLHPDAGNMFENGCYLRRQKR 219


>gi|403256739|ref|XP_003921010.1| PREDICTED: forkhead box protein B2 [Saimiri boliviensis
           boliviensis]
          Length = 326

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/62 (50%), Positives = 36/62 (58%), Gaps = 4/62 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRRKSSDIQHRKQ 61
           NS+RHNLS N CF+K+PR  DQPGKG FW L  D   + E G   R  RRK   +     
Sbjct: 59  NSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPDCGDMFENGSFLR--RRKRFKVLRADH 116

Query: 62  AH 63
           AH
Sbjct: 117 AH 118


>gi|2352801|gb|AAB69278.1| fork head 1 [Molgula oculata]
          Length = 567

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 33/50 (66%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR 51
           NSIRH+LS N CFVKVPRS D+PGKG +W L  D   + E G   R  +R
Sbjct: 163 NSIRHSLSFNDCFVKVPRSPDKPGKGSYWSLHPDAGNMFENGCYLRRQKR 212


>gi|355691833|gb|EHH27018.1| hypothetical protein EGK_17116 [Macaca mulatta]
          Length = 378

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 3/55 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDI 56
           NSIRHNLSLN CF KVPR  D PGKG +W LD   +K+ +  G +R  R++ SD+
Sbjct: 169 NSIRHNLSLNDCFKKVPRDDDDPGKGNYWTLDPNCEKMFD-NGNFRRKRKRKSDV 222


>gi|189236452|ref|XP_973691.2| PREDICTED: similar to sloppy-paired [Tribolium castaneum]
          Length = 265

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/32 (81%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD
Sbjct: 125 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLD 156


>gi|355689109|gb|AER98721.1| forkhead box K1 [Mustela putorius furo]
          Length = 367

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDL---QKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 219 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQR 268


>gi|291413710|ref|XP_002723111.1| PREDICTED: forkhead box K1-like, partial [Oryctolagus cuniculus]
          Length = 628

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 246 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQR 295


>gi|195032360|ref|XP_001988485.1| GH11193 [Drosophila grimshawi]
 gi|193904485|gb|EDW03352.1| GH11193 [Drosophila grimshawi]
          Length = 340

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/65 (50%), Positives = 39/65 (60%), Gaps = 6/65 (9%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLE----EGGGRYRNVRRKSSDIQHR 59
           NSIRHNLSLNKCF K+PRS D PGKG +W LD    E    E  G+ R  R+     + R
Sbjct: 172 NSIRHNLSLNKCFTKIPRSYDDPGKGNYWILDPSAEEVFIGETTGKLR--RKNPGASRTR 229

Query: 60  KQAHR 64
             A+R
Sbjct: 230 LAAYR 234


>gi|426246743|ref|XP_004017149.1| PREDICTED: LOW QUALITY PROTEIN: forkhead box protein I1 [Ovis
           aries]
          Length = 433

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 3/55 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDI 56
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ +  G +R  R++ SD+
Sbjct: 228 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFD-NGNFRRKRKRKSDV 281


>gi|410914142|ref|XP_003970547.1| PREDICTED: forkhead box protein I1-ema-like [Takifugu rubripes]
          Length = 387

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/52 (57%), Positives = 36/52 (69%), Gaps = 2/52 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKS 53
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ + G   R  +RKS
Sbjct: 178 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRKS 229


>gi|241639977|ref|XP_002409231.1| transcription factor, putative [Ixodes scapularis]
 gi|215501314|gb|EEC10808.1| transcription factor, putative [Ixodes scapularis]
          Length = 222

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/68 (47%), Positives = 40/68 (58%), Gaps = 3/68 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR-KSSDIQHRK 60
           NSIRH+LS N CFVKVPR+ D+PGKG FW L  D   + E G   R  +R K    +  +
Sbjct: 36  NSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCEKREAAR 95

Query: 61  QAHRPKPA 68
           QA +  P 
Sbjct: 96  QAQKATPG 103


>gi|431918208|gb|ELK17436.1| Forkhead box protein K1 [Pteropus alecto]
          Length = 1076

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 690 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQR 739


>gi|82546826|ref|NP_951031.2| forkhead box protein K1 [Mus musculus]
 gi|118572647|sp|P42128.2|FOXK1_MOUSE RecName: Full=Forkhead box protein K1; AltName: Full=Myocyte
           nuclear factor; Short=MNF
 gi|74181249|dbj|BAE27871.1| unnamed protein product [Mus musculus]
 gi|162319104|gb|AAI56274.1| Forkhead box K1 [synthetic construct]
          Length = 719

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 337 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQR 386


>gi|334333320|ref|XP_001368139.2| PREDICTED: forkhead box protein K1-like [Monodelphis domestica]
          Length = 666

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 306 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQR 355


>gi|449476290|ref|XP_004175720.1| PREDICTED: forkhead box protein K1 [Taeniopygia guttata]
          Length = 532

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 171 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQR 220


>gi|348508396|ref|XP_003441740.1| PREDICTED: forkhead box protein G1-like [Oreochromis niloticus]
          Length = 398

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/32 (81%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD
Sbjct: 144 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLD 175


>gi|296189702|ref|XP_002742883.1| PREDICTED: forkhead box protein B2-like [Callithrix jacchus]
          Length = 425

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/62 (50%), Positives = 36/62 (58%), Gaps = 4/62 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRRKSSDIQHRKQ 61
           NS+RHNLS N CF+K+PR  DQPGKG FW L  D   + E G   R  RRK   +     
Sbjct: 59  NSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPDCGDMFENGSFLR--RRKRFKVLRADH 116

Query: 62  AH 63
           AH
Sbjct: 117 AH 118


>gi|340725157|ref|XP_003400940.1| PREDICTED: forkhead box protein K2-like [Bombus terrestris]
 gi|350417002|ref|XP_003491209.1| PREDICTED: forkhead box protein K2-like [Bombus impatiens]
          Length = 540

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/50 (60%), Positives = 37/50 (74%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQ---KLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D Q   KL E   R R  R
Sbjct: 299 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPQSEAKLIEQAFRQRRQR 348


>gi|410909732|ref|XP_003968344.1| PREDICTED: forkhead box protein G1-like [Takifugu rubripes]
          Length = 382

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/32 (81%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD
Sbjct: 135 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLD 166


>gi|359077128|ref|XP_002696174.2| PREDICTED: forkhead box protein K2 [Bos taurus]
          Length = 644

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 288 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPR 337


>gi|357618053|gb|EHJ71148.1| putative Forkhead box protein E1 [Danaus plexippus]
          Length = 183

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/60 (53%), Positives = 38/60 (63%), Gaps = 1/60 (1%)

Query: 4  NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSSDIQHRKQA 62
          NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+     + A
Sbjct: 36 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRSTAASRSRLA 95


>gi|410962120|ref|XP_003987623.1| PREDICTED: forkhead box protein G1 [Felis catus]
          Length = 506

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+
Sbjct: 244 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRST 295


>gi|270006435|gb|EFA02883.1| sloppy paired 1 [Tribolium castaneum]
          Length = 208

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/32 (81%), Positives = 27/32 (84%)

Query: 4  NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
          NSIRHNLSLNKCFVKVPR  D PGKG +W LD
Sbjct: 68 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLD 99


>gi|403280729|ref|XP_003931864.1| PREDICTED: forkhead box protein K2 [Saimiri boliviensis
           boliviensis]
          Length = 755

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 399 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPR 448


>gi|82706186|gb|ABB89477.1| forkhead transcription factor G [Strongylocentrotus purpuratus]
          Length = 185

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/32 (81%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD
Sbjct: 109 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLD 140


>gi|328793785|ref|XP_623740.3| PREDICTED: forkhead box protein K2-like [Apis mellifera]
          Length = 556

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/50 (60%), Positives = 37/50 (74%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQ---KLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D Q   KL E   R R  R
Sbjct: 316 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPQSEAKLIEQAFRRRRQR 365


>gi|339235983|ref|XP_003379546.1| forkhead box protein G1 [Trichinella spiralis]
 gi|316977788|gb|EFV60845.1| forkhead box protein G1 [Trichinella spiralis]
          Length = 362

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/63 (49%), Positives = 41/63 (65%), Gaps = 3/63 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG--GGRYRNVRRKSSDIQHRKQ 61
           NSIRHNLSLNKCF+KVPR  D PGKG +W +D    E+   G     +RR+++  + R +
Sbjct: 136 NSIRHNLSLNKCFIKVPRHYDDPGKGNYWMVD-PSCEDAFIGSSTGKLRRRNTAHRVRLE 194

Query: 62  AHR 64
           A R
Sbjct: 195 ALR 197


>gi|307205445|gb|EFN83777.1| Forkhead box protein K2 [Harpegnathos saltator]
          Length = 553

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/50 (60%), Positives = 37/50 (74%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQ---KLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D Q   KL E   R R  R
Sbjct: 310 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPQSEAKLIEQAFRRRRQR 359


>gi|291383407|ref|XP_002708260.1| PREDICTED: forkhead box B2-like [Oryctolagus cuniculus]
          Length = 436

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/62 (50%), Positives = 36/62 (58%), Gaps = 4/62 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRRKSSDIQHRKQ 61
           NS+RHNLS N CF+K+PR  DQPGKG FW L  D   + E G   R  RRK   +     
Sbjct: 59  NSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPDCGDMFENGSFLR--RRKRFKVLRADH 116

Query: 62  AH 63
           AH
Sbjct: 117 AH 118


>gi|118097798|ref|XP_414784.2| PREDICTED: forkhead box protein K1 [Gallus gallus]
          Length = 533

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 171 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQR 220


>gi|6679833|ref|NP_032049.1| forkhead box protein B2 [Mus musculus]
 gi|2494501|sp|Q64733.1|FOXB2_MOUSE RecName: Full=Forkhead box protein B2; AltName: Full=Transcription
           factor FKH-4
 gi|1280485|emb|CAA63335.1| transcription factor [Mus musculus]
 gi|148709599|gb|EDL41545.1| forkhead box B2 [Mus musculus]
 gi|223460062|gb|AAI39477.1| Forkhead box B2 [Mus musculus]
 gi|223460797|gb|AAI39478.1| Forkhead box B2 [Mus musculus]
          Length = 428

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/62 (50%), Positives = 36/62 (58%), Gaps = 4/62 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRRKSSDIQHRKQ 61
           NS+RHNLS N CF+K+PR  DQPGKG FW L  D   + E G   R  RRK   +     
Sbjct: 59  NSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPDCGDMFENGSFLR--RRKRFKVLRADH 116

Query: 62  AH 63
           AH
Sbjct: 117 AH 118


>gi|85690963|ref|XP_965881.1| transcription factor [Encephalitozoon cuniculi GB-M1]
 gi|19068448|emb|CAD24916.1| TRANSCRIPTION FACTOR SIMILAR TO FORK HEAD PROTEIN [Encephalitozoon
           cuniculi GB-M1]
 gi|449329805|gb|AGE96074.1| transcription factor [Encephalitozoon cuniculi]
          Length = 216

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/122 (36%), Positives = 59/122 (48%), Gaps = 16/122 (13%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQ-KLEEGGGRYRNVRRKSSDIQHRKQA 62
           NSIRHNLSLNK F KVPR+   PGKG FWK++ + +  +G  +    R K S   HR  A
Sbjct: 87  NSIRHNLSLNKSFYKVPRTSVNPGKGSFWKINYEFQTNKGSQKTYRSRNKYSFNSHR-DA 145

Query: 63  HRPKPAPSENLNTA-------------YTNNNSIAPGENLNKLEDKLDDTLMESEISMTD 109
            +   + SE L T              Y  + ++  G NL  L D LD +  +      D
Sbjct: 146 EKNVNSISELLGTQQGFFDNIGVTEVPYERHTTVFDG-NLTSLSDCLDQSYQKEYFDHND 204

Query: 110 DI 111
           D+
Sbjct: 205 DV 206


>gi|1766075|gb|AAC60065.1| winged helix protein CWH-2 [Gallus gallus]
          Length = 445

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/74 (41%), Positives = 43/74 (58%), Gaps = 10/74 (13%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQ--KLEEGGG--------RYRNVRRKS 53
           NSIRHNLSLN+CFVKVPR   +PGKG +W LD     + E G         + ++V ++ 
Sbjct: 85  NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVSKEM 144

Query: 54  SDIQHRKQAHRPKP 67
            + + R    +PKP
Sbjct: 145 EEARERLLKEQPKP 158


>gi|301755174|ref|XP_002913428.1| PREDICTED: forkhead box protein L1-like [Ailuropoda melanoleuca]
 gi|281339951|gb|EFB15535.1| hypothetical protein PANDA_001233 [Ailuropoda melanoleuca]
          Length = 346

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/37 (70%), Positives = 30/37 (81%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLE 40
           NSIRHNLSLN CFVKVPR K +PGKG +W LD + L+
Sbjct: 95  NSIRHNLSLNDCFVKVPREKGRPGKGSYWTLDPRCLD 131


>gi|195401323|ref|XP_002059263.1| GJ16300 [Drosophila virilis]
 gi|194156137|gb|EDW71321.1| GJ16300 [Drosophila virilis]
          Length = 343

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/32 (78%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCF K+PRS D PGKG +W LD
Sbjct: 174 NSIRHNLSLNKCFTKIPRSYDDPGKGNYWILD 205


>gi|390457847|ref|XP_003732013.1| PREDICTED: forkhead box protein D4-like [Callithrix jacchus]
          Length = 442

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/32 (75%), Positives = 26/32 (81%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLN CFVK+PR   QPGKG +W LD
Sbjct: 149 NSIRHNLSLNDCFVKIPREPGQPGKGNYWSLD 180


>gi|156400206|ref|XP_001638891.1| predicted protein [Nematostella vectensis]
 gi|156226015|gb|EDO46828.1| predicted protein [Nematostella vectensis]
          Length = 101

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/32 (81%), Positives = 28/32 (87%)

Query: 4  NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
          NSIRHNLSLNKCFVKVPR+ D PGKG +W LD
Sbjct: 48 NSIRHNLSLNKCFVKVPRNYDDPGKGNYWMLD 79


>gi|148687154|gb|EDL19101.1| forkhead box K1 [Mus musculus]
          Length = 632

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 250 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQR 299


>gi|397518538|ref|XP_003829442.1| PREDICTED: hepatocyte nuclear factor 3-beta [Pan paniscus]
          Length = 327

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/59 (50%), Positives = 36/59 (61%), Gaps = 2/59 (3%)

Query: 1   MRVNSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRRKSSDIQ 57
           M  NSIRH+LS N CF+KVPRS D+PGKG FW L  D   + E G   R  +R   + Q
Sbjct: 71  MSSNSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCEKQ 129


>gi|348516711|ref|XP_003445881.1| PREDICTED: forkhead box protein I1-ema-like [Oreochromis niloticus]
          Length = 392

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/96 (39%), Positives = 55/96 (57%), Gaps = 7/96 (7%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDIQHRKQ 61
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ + G   R  +RKS  +     
Sbjct: 178 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRKSDSLSSGDG 237

Query: 62  AHR-PKPAPSENLNTAYTNNNSIAPGENLNKLEDKL 96
           +   P+   SE  +  +++N    PG N++   D++
Sbjct: 238 SSGPPESGDSERASPKHSSN----PGLNMSPAADRI 269


>gi|418205349|gb|AFX62228.1| forkhead box J1-like protein 1 [Schmidtea mediterranea]
          Length = 464

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/70 (42%), Positives = 43/70 (61%), Gaps = 7/70 (10%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEGGGRYRNVRRKSSDIQHRKQAH 63
           NS+RHNLS+NK F KVPR KD+PGKGGFW+++   ++E       +    S I++   +H
Sbjct: 213 NSVRHNLSMNKYFQKVPRRKDEPGKGGFWRMNPDNIKE-------LDHNLSKIKYNPSSH 265

Query: 64  RPKPAPSENL 73
              P  +E L
Sbjct: 266 SIIPIKTEKL 275


>gi|383848334|ref|XP_003699806.1| PREDICTED: forkhead box protein K2-like [Megachile rotundata]
          Length = 556

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/50 (60%), Positives = 37/50 (74%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQ---KLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D Q   KL E   R R  R
Sbjct: 315 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPQSEAKLIEQAFRRRRQR 364


>gi|344247556|gb|EGW03660.1| Forkhead box protein I3 [Cricetulus griseus]
          Length = 269

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/52 (55%), Positives = 36/52 (69%), Gaps = 2/52 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKS 53
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ + G   R  +R+S
Sbjct: 51  NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRRS 102


>gi|332265375|ref|XP_003281699.1| PREDICTED: forkhead box protein K2 [Nomascus leucogenys]
          Length = 668

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 312 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPR 361


>gi|326537183|emb|CBX36143.1| sloppy-paired protein [Glomeris marginata]
          Length = 324

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/32 (81%), Positives = 27/32 (84%)

Query: 4  NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
          NSIRHNLSLNKCFVKVPR  D PGKG +W LD
Sbjct: 39 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLD 70


>gi|321460278|gb|EFX71322.1| hypothetical protein DAPPUDRAFT_8535 [Daphnia pulex]
          Length = 107

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+
Sbjct: 54  NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRST 105


>gi|159163712|pdb|2A3S|A Chain A, Solution Structure And Dynamics Of Dna-Binding Domain Of
          Myocyte Nuclear Factor
 gi|159163972|pdb|2D2W|A Chain A, Solution Structure And Dynamics Of The Dna-Binding
          Domain Of Myocyte Nuclear Factor
          Length = 101

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4  NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDL---QKLEEGGGRYRNVR 50
          NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 49 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQR 98


>gi|444515198|gb|ELV10787.1| Forkhead box protein I3 [Tupaia chinensis]
          Length = 267

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/52 (55%), Positives = 36/52 (69%), Gaps = 2/52 (3%)

Query: 4  NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKS 53
          NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ + G   R  +R+S
Sbjct: 36 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRRS 87


>gi|45384084|ref|NP_990469.1| forkhead box protein C2 [Gallus gallus]
 gi|2072324|gb|AAB53749.1| winged helix transcriptional factor MFH-1 [Gallus gallus]
          Length = 468

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/74 (41%), Positives = 43/74 (58%), Gaps = 10/74 (13%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQ--KLEEGGG--------RYRNVRRKS 53
           NSIRHNLSLN+CFVKVPR   +PGKG +W LD     + E G         + ++V ++ 
Sbjct: 118 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVSKEK 177

Query: 54  SDIQHRKQAHRPKP 67
            + + R    +PKP
Sbjct: 178 EEARERLLKEQPKP 191


>gi|82706204|gb|ABB89486.1| forkhead transcription factor K [Strongylocentrotus purpuratus]
          Length = 606

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/32 (75%), Positives = 30/32 (93%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLN+ F+KVPRS+++PGKG FW+LD
Sbjct: 302 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRLD 333


>gi|18858699|ref|NP_571360.1| forkhead box protein B1 [Danio rerio]
 gi|326680384|ref|XP_003201510.1| PREDICTED: forkhead box protein B1-like isoform 1 [Danio rerio]
 gi|326680386|ref|XP_003201511.1| PREDICTED: forkhead box protein B1-like isoform 2 [Danio rerio]
 gi|2982343|gb|AAC06363.1| fork head domain protein FKD3 [Danio rerio]
 gi|34785125|gb|AAH56754.1| Foxb1.2 protein [Danio rerio]
 gi|42542436|gb|AAH66395.1| Forkhead box B1.2 [Danio rerio]
          Length = 297

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/74 (43%), Positives = 37/74 (50%), Gaps = 14/74 (18%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR---------- 51
           NS+RHNLS N CF+K+PR  DQPGKG FW L      + E G   R  +R          
Sbjct: 59  NSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPSCGDMFENGSFLRRRKRFKVMTSEHLA 118

Query: 52  --KSSDIQHRKQAH 63
             K SD  H  Q H
Sbjct: 119 PSKPSDAAHYLQQH 132


>gi|167900441|ref|NP_001032296.2| forkhead box K1 [Rattus norvegicus]
          Length = 719

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 337 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQR 386


>gi|443692513|gb|ELT94106.1| hypothetical protein CAPTEDRAFT_139421, partial [Capitella teleta]
          Length = 157

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/32 (81%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD
Sbjct: 104 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLD 135


>gi|47226410|emb|CAG08426.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 293

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/56 (53%), Positives = 35/56 (62%), Gaps = 4/56 (7%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRRKSSDIQ 57
           NS+RHNLS N CF+K+PR  DQPGKG FW L  D   + E G   R  RRK   +Q
Sbjct: 59  NSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPDCGDMFENGSFLR--RRKRFKVQ 112


>gi|289541363|gb|ADD09805.1| forkhead box A2 protein [Branchiostoma belcheri]
          Length = 261

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/89 (40%), Positives = 48/89 (53%), Gaps = 14/89 (15%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR-----KSSDI 56
           NSIRH+LS N CFVKVPR+ D+PGKG +W L  +   + E G   R  +R     K +  
Sbjct: 115 NSIRHSLSFNDCFVKVPRTPDRPGKGSYWTLHPEAGNMFENGCYLRRQKRFKCEKKLAMK 174

Query: 57  QHRKQAHRPKPAPSENLNTAYTNNNSIAP 85
             ++QA R  P P        T N ++AP
Sbjct: 175 MAQQQAARDTPNPG-------TENTAVAP 196


>gi|74190391|dbj|BAE25880.1| unnamed protein product [Mus musculus]
          Length = 616

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 234 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQR 283


>gi|395514808|ref|XP_003761604.1| PREDICTED: forkhead box protein K1, partial [Sarcophilus harrisii]
          Length = 524

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 164 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQR 213


>gi|508528|gb|AAA37529.1| myocyte nuclear factor [Mus musculus]
          Length = 617

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 335 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQR 384


>gi|395819253|ref|XP_003783010.1| PREDICTED: forkhead box protein B2 [Otolemur garnettii]
          Length = 432

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/62 (50%), Positives = 36/62 (58%), Gaps = 4/62 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRRKSSDIQHRKQ 61
           NS+RHNLS N CF+K+PR  DQPGKG FW L  D   + E G   R  RRK   +     
Sbjct: 59  NSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPDCGDMFENGSFLR--RRKRFKVLRADH 116

Query: 62  AH 63
           AH
Sbjct: 117 AH 118


>gi|449687443|ref|XP_002156863.2| PREDICTED: forkhead box protein J3-like [Hydra magnipapillata]
          Length = 593

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/51 (54%), Positives = 36/51 (70%), Gaps = 2/51 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRK 52
           NSIRHNLSLN+CF KVPR+K+ PGKG +W +D   Q  E   GR + + +K
Sbjct: 130 NSIRHNLSLNRCFQKVPRTKEDPGKGSYWAIDPNPQPEEFYNGRQQRLPKK 180


>gi|327263538|ref|XP_003216576.1| PREDICTED: forkhead box protein B2-like [Anolis carolinensis]
          Length = 287

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/62 (51%), Positives = 39/62 (62%), Gaps = 5/62 (8%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRRKSSDIQHRKQ 61
           NS+RHNLS N CF+K+PR  DQPGKG FW L  D   + E G   R  RRK   +  R++
Sbjct: 59  NSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPDCGDMFENGSFLR--RRKRFKVP-RQE 115

Query: 62  AH 63
           AH
Sbjct: 116 AH 117


>gi|274318372|ref|NP_001162056.1| forkhead box B2 [Rattus norvegicus]
          Length = 425

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/62 (50%), Positives = 36/62 (58%), Gaps = 4/62 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRRKSSDIQHRKQ 61
           NS+RHNLS N CF+K+PR  DQPGKG FW L  D   + E G   R  RRK   +     
Sbjct: 59  NSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPDCGDMFENGSFLR--RRKRFKVLRADH 116

Query: 62  AH 63
           AH
Sbjct: 117 AH 118


>gi|301782121|ref|XP_002926479.1| PREDICTED: forkhead box protein K2-like [Ailuropoda melanoleuca]
          Length = 636

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 280 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPR 329


>gi|260819483|ref|XP_002605066.1| hypothetical protein BRAFLDRAFT_124138 [Branchiostoma floridae]
 gi|229290396|gb|EEN61076.1| hypothetical protein BRAFLDRAFT_124138 [Branchiostoma floridae]
          Length = 440

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQ---KLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 338 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPSCEAKLTEQAWRRRRQR 387


>gi|327267662|ref|XP_003218618.1| PREDICTED: forkhead box protein I2-like [Anolis carolinensis]
          Length = 267

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/54 (57%), Positives = 38/54 (70%), Gaps = 3/54 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSD 55
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ +  G +R  R+K SD
Sbjct: 62  NSIRHNLSLNDCFKKVPRHEDDPGKGNYWTLDPNCEKMFD-NGNFRRKRKKRSD 114


>gi|390346581|ref|XP_793339.3| PREDICTED: forkhead box protein K2 [Strongylocentrotus purpuratus]
          Length = 682

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/32 (75%), Positives = 30/32 (93%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLN+ F+KVPRS+++PGKG FW+LD
Sbjct: 305 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRLD 336


>gi|213982945|ref|NP_001135634.1| forkhead box K2 [Xenopus (Silurana) tropicalis]
 gi|197245585|gb|AAI68486.1| Unknown (protein for MGC:172864) [Xenopus (Silurana) tropicalis]
          Length = 645

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 265 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLVEQAFRKRRPR 314


>gi|125859033|gb|AAI29658.1| LOC100037201 protein [Xenopus laevis]
          Length = 317

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/53 (56%), Positives = 36/53 (67%), Gaps = 1/53 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSSD 55
           NSIRHNLSLNKCF+KVPR  D PGKG +W LD    +   GG    +RR+S+ 
Sbjct: 161 NSIRHNLSLNKCFLKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRSTS 213


>gi|395508443|ref|XP_003758521.1| PREDICTED: forkhead box protein C2 [Sarcophilus harrisii]
          Length = 372

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/111 (36%), Positives = 56/111 (50%), Gaps = 8/111 (7%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVRRKSSDIQHRK 60
           NSIRHNLSLN+CFVKVPR   +PGKG +W LD       E G    R  R K  D+   K
Sbjct: 119 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVPKDK 178

Query: 61  Q--AHRPKPAPSENLNTAYTNNNSIAPGENLNKLEDKLDDTLMESEISMTD 109
           +   H  +P P      A      ++  +   ++E K+   +++SE S  D
Sbjct: 179 EERGHLKEPPPQAPKGAAAHAGAPLSSSDTPKEVEKKV---VIKSEASSPD 226


>gi|395533769|ref|XP_003768925.1| PREDICTED: forkhead box protein K2, partial [Sarcophilus harrisii]
          Length = 686

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 330 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPR 379


>gi|345806716|ref|XP_548802.3| PREDICTED: forkhead box protein K2 [Canis lupus familiaris]
          Length = 907

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 551 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPR 600


>gi|410982056|ref|XP_003997378.1| PREDICTED: forkhead box protein K2 [Felis catus]
          Length = 610

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 254 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPR 303


>gi|397475178|ref|XP_003809023.1| PREDICTED: forkhead box protein K2, partial [Pan paniscus]
          Length = 528

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 218 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPR 267


>gi|327264796|ref|XP_003217197.1| PREDICTED: forkhead box protein K2-like [Anolis carolinensis]
          Length = 804

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 448 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPR 497


>gi|238054023|ref|NP_001153932.1| forkhead box I2 [Oryzias latipes]
 gi|226441736|gb|ACO57470.1| forkhead box I2 [Oryzias latipes]
          Length = 391

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/54 (55%), Positives = 38/54 (70%), Gaps = 3/54 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSD 55
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ +  G +R  R++ SD
Sbjct: 179 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFD-NGNFRRKRKRRSD 231


>gi|56270239|gb|AAH86703.1| Forkhead box A2 [Danio rerio]
 gi|182889936|gb|AAI65835.1| Foxa2 protein [Danio rerio]
          Length = 409

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/54 (53%), Positives = 34/54 (62%), Gaps = 2/54 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRRKSSD 55
           NSIRH+LS N CF+KVPRS D+PGKG FW L  D   + E G   R  +R   D
Sbjct: 197 NSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCD 250


>gi|939887|emb|CAA52241.1| HBF-3 [Homo sapiens]
          Length = 224

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/62 (51%), Positives = 39/62 (62%), Gaps = 1/62 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSSDIQHRKQA 62
           NSIR NLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+  + +  A
Sbjct: 80  NSIRDNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRSTTSRAKLAA 139

Query: 63  HR 64
            R
Sbjct: 140 FR 141


>gi|18858687|ref|NP_571024.1| forkhead box protein A2 [Danio rerio]
 gi|3023376|sp|Q07342.1|FOXA2_DANRE RecName: Full=Forkhead box protein A2; AltName: Full=Axial protein
 gi|311268|emb|CAA80443.1| axial [Danio rerio]
 gi|449010|prf||1918271A axial gene
          Length = 409

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/54 (53%), Positives = 34/54 (62%), Gaps = 2/54 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRRKSSD 55
           NSIRH+LS N CF+KVPRS D+PGKG FW L  D   + E G   R  +R   D
Sbjct: 197 NSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCD 250


>gi|149212459|gb|ABR22534.1| forkhead box transcription factor subgroup K2 [Aedes aegypti]
          Length = 716

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/67 (49%), Positives = 43/67 (64%), Gaps = 2/67 (2%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDL-QKLEEGGGRYRNVRRKSSDIQHRKQA 62
           NSIRHNLSLN+ F+KVPR +D+PGKG FW++D   +L+     YR  R++ S    R   
Sbjct: 591 NSIRHNLSLNRYFIKVPRLQDEPGKGSFWRIDPNSELKLIDQSYRKRRQRGSQC-FRTPY 649

Query: 63  HRPKPAP 69
             PK AP
Sbjct: 650 GMPKSAP 656


>gi|149034993|gb|EDL89713.1| rCG42803 [Rattus norvegicus]
          Length = 563

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 274 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQR 323


>gi|157126561|ref|XP_001660929.1| hypothetical protein AaeL_AAEL010565 [Aedes aegypti]
 gi|108873235|gb|EAT37460.1| AAEL010565-PB [Aedes aegypti]
          Length = 716

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/67 (49%), Positives = 43/67 (64%), Gaps = 2/67 (2%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDL-QKLEEGGGRYRNVRRKSSDIQHRKQA 62
           NSIRHNLSLN+ F+KVPR +D+PGKG FW++D   +L+     YR  R++ S    R   
Sbjct: 591 NSIRHNLSLNRYFIKVPRLQDEPGKGSFWRIDPNSELKLIDQSYRKRRQRGSQC-FRTPY 649

Query: 63  HRPKPAP 69
             PK AP
Sbjct: 650 GMPKSAP 656


>gi|410914914|ref|XP_003970932.1| PREDICTED: forkhead box protein I1-ema-like [Takifugu rubripes]
          Length = 347

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/52 (55%), Positives = 36/52 (69%), Gaps = 2/52 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKS 53
           NSIRHNLSLN CF KVPR ++ PGKG +W LD   +K+ + G   R  +RKS
Sbjct: 158 NSIRHNLSLNDCFQKVPRDENDPGKGNYWTLDPNCEKMFDNGNFRRKRKRKS 209


>gi|301780162|ref|XP_002925498.1| PREDICTED: forkhead box protein B2-like [Ailuropoda melanoleuca]
 gi|281342993|gb|EFB18577.1| hypothetical protein PANDA_015014 [Ailuropoda melanoleuca]
          Length = 297

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/62 (48%), Positives = 36/62 (58%), Gaps = 4/62 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRRKSSDIQHRKQ 61
           NS+RHNLS N CF+K+PR  DQPGKG FW L  D   + E G   R  RRK   +   + 
Sbjct: 59  NSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPDCGDMFENGSFLR--RRKRFKVLRAEH 116

Query: 62  AH 63
            H
Sbjct: 117 TH 118


>gi|83318792|emb|CAI91293.1| sloppy paired [Cupiennius salei]
          Length = 75

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/32 (81%), Positives = 27/32 (84%)

Query: 4  NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
          NSIRHNLSLNKCFVKVPR  D PGKG +W LD
Sbjct: 39 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLD 70


>gi|426336324|ref|XP_004031425.1| PREDICTED: forkhead box protein I3 [Gorilla gorilla gorilla]
          Length = 374

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/52 (55%), Positives = 36/52 (69%), Gaps = 2/52 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKS 53
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ + G   R  +R+S
Sbjct: 145 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRRS 196


>gi|253722939|pdb|1JXS|A Chain A, Solution Structure Of The Dna-Binding Domain Of
          Interleukin Enhancer Binding Factor
          Length = 98

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4  NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDL---QKLEEGGGRYRNVR 50
          NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 49 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPR 98


>gi|363733664|ref|XP_426357.3| PREDICTED: forkhead box protein I1c [Gallus gallus]
          Length = 357

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/52 (55%), Positives = 36/52 (69%), Gaps = 2/52 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKS 53
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ + G   R  +R+S
Sbjct: 139 NSIRHNLSLNDCFRKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRRS 190


>gi|274133308|emb|CBI70346.1| forkhead box L1 protein [Patella vulgata]
          Length = 193

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/32 (78%), Positives = 27/32 (84%)

Query: 4  NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
          NSIRHNLSLN CFVKVPR K +PGKG +W LD
Sbjct: 15 NSIRHNLSLNDCFVKVPREKGKPGKGNYWTLD 46


>gi|395749632|ref|XP_002828038.2| PREDICTED: forkhead box protein K2 [Pongo abelii]
          Length = 573

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 217 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPR 266


>gi|426346289|ref|XP_004040812.1| PREDICTED: forkhead box protein K2 [Gorilla gorilla gorilla]
          Length = 540

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 184 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPR 233


>gi|297266491|ref|XP_001088994.2| PREDICTED: forkhead box protein I3-like, partial [Macaca mulatta]
          Length = 323

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/52 (55%), Positives = 36/52 (69%), Gaps = 2/52 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKS 53
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ + G   R  +R+S
Sbjct: 94  NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRRS 145


>gi|195451547|ref|XP_002072971.1| GK13404 [Drosophila willistoni]
 gi|194169056|gb|EDW83957.1| GK13404 [Drosophila willistoni]
          Length = 389

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 32/50 (64%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLE--EGGGRYRNVRR 51
           NS+RHNLS N CF+KVPR  D+PGKG +W L  Q  +  E G   R  +R
Sbjct: 59  NSLRHNLSFNDCFIKVPRRPDRPGKGAYWALHPQAFDMFENGSLLRRRKR 108


>gi|410905675|ref|XP_003966317.1| PREDICTED: forkhead box protein J3-like [Takifugu rubripes]
          Length = 498

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/112 (35%), Positives = 52/112 (46%), Gaps = 15/112 (13%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEGGGRYRNVRRK----SSDIQHR 59
           NSIRHNLSLNKCF KVPR ++ PGKG +W +D      G      VR        D + R
Sbjct: 109 NSIRHNLSLNKCFRKVPRPQNDPGKGSYWTMD------GPPEVSPVRAAKRPFPEDEEKR 162

Query: 60  KQAHRPKPAPSENLNTAYTNNNS-----IAPGENLNKLEDKLDDTLMESEIS 106
           K   +P P    +L+T    + S      AP  + + L   L      S +S
Sbjct: 163 KDVPQPSPYIPSSLSTLPVASASAGLPPAAPMSSFDSLSRPLTPVSAASGVS 214


>gi|344250199|gb|EGW06303.1| Forkhead box protein K2 [Cricetulus griseus]
          Length = 448

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 115 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLVEQAFRKRRPR 164


>gi|1388162|gb|AAB02821.1| interleukin enhancer binding factor 2 [Homo sapiens]
          Length = 609

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 299 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPR 348


>gi|402901468|ref|XP_003913671.1| PREDICTED: forkhead box protein K2 [Papio anubis]
          Length = 663

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 307 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPR 356


>gi|348520610|ref|XP_003447820.1| PREDICTED: forkhead box protein I1c-like [Oreochromis niloticus]
          Length = 398

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/54 (55%), Positives = 38/54 (70%), Gaps = 3/54 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSD 55
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ +  G +R  R++ SD
Sbjct: 179 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFD-NGNFRRKRKRRSD 231


>gi|380799481|gb|AFE71616.1| forkhead box protein G1, partial [Macaca mulatta]
          Length = 262

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)

Query: 5  SIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
          SIRHNLSLNKCFVKVPR  D PGKG +W LD    +   GG    +RR+S+
Sbjct: 1  SIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRST 51


>gi|157126563|ref|XP_001660930.1| hypothetical protein AaeL_AAEL010565 [Aedes aegypti]
 gi|108873236|gb|EAT37461.1| AAEL010565-PA [Aedes aegypti]
          Length = 714

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/67 (49%), Positives = 43/67 (64%), Gaps = 2/67 (2%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDL-QKLEEGGGRYRNVRRKSSDIQHRKQA 62
           NSIRHNLSLN+ F+KVPR +D+PGKG FW++D   +L+     YR  R++ S    R   
Sbjct: 591 NSIRHNLSLNRYFIKVPRLQDEPGKGSFWRIDPNSELKLIDQSYRKRRQRGSQC-FRTPY 649

Query: 63  HRPKPAP 69
             PK AP
Sbjct: 650 GMPKSAP 656


>gi|157126559|ref|XP_001660928.1| hypothetical protein AaeL_AAEL010565 [Aedes aegypti]
 gi|108873234|gb|EAT37459.1| AAEL010565-PC [Aedes aegypti]
          Length = 760

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/67 (49%), Positives = 43/67 (64%), Gaps = 2/67 (2%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDL-QKLEEGGGRYRNVRRKSSDIQHRKQA 62
           NSIRHNLSLN+ F+KVPR +D+PGKG FW++D   +L+     YR  R++ S    R   
Sbjct: 591 NSIRHNLSLNRYFIKVPRLQDEPGKGSFWRIDPNSELKLIDQSYRKRRQRGSQC-FRTPY 649

Query: 63  HRPKPAP 69
             PK AP
Sbjct: 650 GMPKSAP 656


>gi|297273922|ref|XP_001114082.2| PREDICTED: forkhead box protein K2-like, partial [Macaca mulatta]
          Length = 617

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 205 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPR 254


>gi|31563338|ref|NP_004505.2| forkhead box protein K2 [Homo sapiens]
 gi|118572648|sp|Q01167.3|FOXK2_HUMAN RecName: Full=Forkhead box protein K2; AltName: Full=Cellular
           transcription factor ILF-1; AltName: Full=FOXK1;
           AltName: Full=Interleukin enhancer-binding factor 1
          Length = 660

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 304 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPR 353


>gi|28971641|dbj|BAC65248.1| brain factor 1 [Oryzias latipes]
          Length = 187

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/32 (81%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD
Sbjct: 155 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLD 186


>gi|238018071|ref|NP_001074401.2| forkhead box protein K2 [Mus musculus]
 gi|341941094|sp|Q3UCQ1.3|FOXK2_MOUSE RecName: Full=Forkhead box protein K2; AltName: Full=Cellular
           transcription factor ILF-1; AltName: Full=Interleukin
           enhancer-binding factor 1
 gi|195975847|gb|ACG63496.1| interleukin enhancer binding factor 1 [Mus musculus]
          Length = 651

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 295 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLVEQAFRKRRPR 344


>gi|41054015|ref|NP_956196.1| forkhead box protein K1 [Danio rerio]
 gi|32451944|gb|AAH54664.1| Forkhead box K1 [Danio rerio]
          Length = 639

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQ---KLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 304 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRVDPSSEAKLVEQAFRKRRQR 353


>gi|33854|emb|CAA43200.1| transcription factor ILF [Homo sapiens]
          Length = 543

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 187 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPR 236


>gi|380797013|gb|AFE70382.1| forkhead box protein K2, partial [Macaca mulatta]
          Length = 554

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 198 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPR 247


>gi|332849394|ref|XP_003315834.1| PREDICTED: forkhead box protein K2, partial [Pan troglodytes]
          Length = 646

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 290 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPR 339


>gi|126309470|ref|XP_001374306.1| PREDICTED: forkhead box protein K2 [Monodelphis domestica]
          Length = 681

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 325 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPR 374


>gi|29477086|gb|AAH50072.1| Forkhead box G1 [Homo sapiens]
          Length = 489

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/52 (57%), Positives = 35/52 (67%), Gaps = 1/52 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
           NSIRHNLSLN CFVKVPR  D PGKG +W LD    +   GG    +RR+S+
Sbjct: 227 NSIRHNLSLNMCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRST 278


>gi|440908795|gb|ELR58780.1| Forkhead box protein C2, partial [Bos grunniens mutus]
          Length = 338

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/74 (47%), Positives = 43/74 (58%), Gaps = 5/74 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVRRKSSDIQHRK 60
           NSIRHNLSLN+CFVKVPR   +PGKG +W LD       E G    R  R K  D+   K
Sbjct: 119 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVPKEK 178

Query: 61  Q--AHRPKPAPSEN 72
           +  AH  +P P+ +
Sbjct: 179 EERAHLKEPPPAAS 192


>gi|5689026|dbj|BAA82786.1| hepatocyte nuclear factor-3 [Ptychodera flava]
          Length = 345

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/67 (46%), Positives = 40/67 (59%), Gaps = 3/67 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR-KSSDIQHRK 60
           NSIRH+LS N CF+KVPR+ D+PGKG FW L  D   + E G   R  +R K    +  K
Sbjct: 168 NSIRHSLSFNDCFLKVPRTPDRPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCPKKEATK 227

Query: 61  QAHRPKP 67
             H+ +P
Sbjct: 228 LTHKTEP 234


>gi|358417560|ref|XP_610873.4| PREDICTED: forkhead box protein K2, partial [Bos taurus]
          Length = 561

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 205 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPR 254


>gi|149758756|ref|XP_001490395.1| PREDICTED: forkhead box protein K2 [Equus caballus]
          Length = 567

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 211 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPR 260


>gi|387915504|gb|AFK11361.1| hepatocyte nuclear factor 3-beta [Callorhinchus milii]
          Length = 430

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 33/50 (66%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR 51
           NSIRH+LS N CF+KVPRS D+PGKG FW L  D   + E G   R  +R
Sbjct: 200 NSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKR 249


>gi|297667147|ref|XP_002811854.1| PREDICTED: forkhead box protein I3 [Pongo abelii]
          Length = 341

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/52 (55%), Positives = 36/52 (69%), Gaps = 2/52 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKS 53
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ + G   R  +R+S
Sbjct: 112 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRRS 163


>gi|390348308|ref|XP_787062.2| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC581992
           [Strongylocentrotus purpuratus]
          Length = 341

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/51 (52%), Positives = 36/51 (70%), Gaps = 2/51 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRK 52
           NSIRHNLSLN CF+KVPR+ + PGKG +W LD   +K+ + G   R  +R+
Sbjct: 167 NSIRHNLSLNDCFIKVPRADNDPGKGHYWTLDPNCEKMFDNGNFRRKRKRR 217


>gi|357603694|gb|EHJ63883.1| putative forkhead box K1 [Danaus plexippus]
          Length = 608

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/50 (60%), Positives = 37/50 (74%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQ---KLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D Q   KL E   R R  R
Sbjct: 296 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPQSEGKLIELAFRPRRPR 345


>gi|348558316|ref|XP_003464964.1| PREDICTED: forkhead box protein K2-like [Cavia porcellus]
          Length = 690

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 339 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPR 388


>gi|238054021|ref|NP_001153931.1| forkhead box G2 [Oryzias latipes]
 gi|226441730|gb|ACO57467.1| forkhead box G2 [Oryzias latipes]
          Length = 387

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/32 (78%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCF+KVPR  D PGKG +W LD
Sbjct: 140 NSIRHNLSLNKCFIKVPRHYDDPGKGNYWMLD 171


>gi|157170406|gb|AAI52768.1| Forkhead box K2 [synthetic construct]
          Length = 809

 Score = 59.7 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 453 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLVEQAFRKRRPR 502


>gi|3694936|gb|AAC62493.1| forkhead/winged helix transcription factor Fkh5 [Homo sapiens]
          Length = 324

 Score = 59.7 bits (143), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/72 (41%), Positives = 38/72 (52%), Gaps = 14/72 (19%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR---------- 51
           NS+RHNLS N CF+K+PR  DQPGKG FW L      + E G   R  +R          
Sbjct: 59  NSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPSCGDMFENGSFLRRCKRFKVLKSDHLA 118

Query: 52  --KSSDIQHRKQ 61
             K +D Q+ +Q
Sbjct: 119 PSKPADAQYLQQ 130


>gi|2289235|gb|AAB69641.1| myocyte nuclear factor-beta [Mus musculus]
          Length = 409

 Score = 59.7 bits (143), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDL---QKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 335 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQR 384


>gi|359068204|ref|XP_002689715.2| PREDICTED: forkhead box protein B2 [Bos taurus]
          Length = 277

 Score = 59.7 bits (143), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/57 (50%), Positives = 35/57 (61%), Gaps = 4/57 (7%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRRKSSDIQH 58
           NS+RHNLS N CF+K+PR  DQPGKG FW L  D   + E G   R  R  +S  +H
Sbjct: 59  NSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPDCGDMFENGSFLR--RXXTSGFKH 113


>gi|126304727|ref|XP_001365891.1| PREDICTED: forkhead box protein C2-like [Monodelphis domestica]
          Length = 506

 Score = 59.7 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/71 (47%), Positives = 40/71 (56%), Gaps = 5/71 (7%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVRRKSSDIQHRK 60
           NSIRHNLSLN+CFVKVPR   +PGKG +W LD       E G    R  R K  D+   K
Sbjct: 119 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVPKEK 178

Query: 61  Q--AHRPKPAP 69
           +   H  +P P
Sbjct: 179 EERGHLKEPPP 189


>gi|170031286|ref|XP_001843517.1| fork head [Culex quinquefasciatus]
 gi|167869544|gb|EDS32927.1| fork head [Culex quinquefasciatus]
          Length = 438

 Score = 59.7 bits (143), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 33/50 (66%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR 51
           NSIRH+LS N CFVKVPR+ D+PGKG FW L  D   + E G   R  +R
Sbjct: 196 NSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHPDSGNMFENGCYLRRQKR 245


>gi|284261|pir||B42827 interleukin enhancer-binding factor ILF-2 - human
          Length = 497

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 23/32 (71%), Positives = 30/32 (93%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D
Sbjct: 187 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRID 218


>gi|195996907|ref|XP_002108322.1| hypothetical protein TRIADDRAFT_19948 [Trichoplax adhaerens]
 gi|190589098|gb|EDV29120.1| hypothetical protein TRIADDRAFT_19948, partial [Trichoplax
           adhaerens]
          Length = 133

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 25/32 (78%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCFVK+PR  D PGKG +W LD
Sbjct: 80  NSIRHNLSLNKCFVKMPRHYDDPGKGNYWALD 111


>gi|75677594|ref|NP_997188.2| forkhead box protein D4 [Homo sapiens]
 gi|311033480|sp|Q12950.4|FOXD4_HUMAN RecName: Full=Forkhead box protein D4; AltName:
           Full=Forkhead-related protein FKHL9; AltName:
           Full=Forkhead-related transcription factor 5;
           Short=FREAC-5; AltName: Full=Myeloid factor-alpha
 gi|58476090|gb|AAH89432.1| Forkhead box D4 [Homo sapiens]
 gi|187953277|gb|AAI36571.1| Forkhead box D4 [Homo sapiens]
 gi|223460382|gb|AAI36572.1| Forkhead box D4 [Homo sapiens]
          Length = 439

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/78 (44%), Positives = 43/78 (55%), Gaps = 3/78 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDL--QKLEEGGGRYRNVRRKSSDIQHRKQ 61
           NSIRHNLSLN CFVK+PR   +PGKG +W LD   Q + + G   R  R++    Q    
Sbjct: 150 NSIRHNLSLNDCFVKIPREPGRPGKGNYWSLDPASQDMFDNGSFLRR-RKRFQRHQPTPG 208

Query: 62  AHRPKPAPSENLNTAYTN 79
           AH P P P    + A  N
Sbjct: 209 AHLPHPFPLPAAHAALHN 226


>gi|301773936|ref|XP_002922377.1| PREDICTED: forkhead box protein I3-like, partial [Ailuropoda
           melanoleuca]
          Length = 296

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/52 (55%), Positives = 36/52 (69%), Gaps = 2/52 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKS 53
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ + G   R  +R+S
Sbjct: 67  NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRRS 118


>gi|281339172|gb|EFB14756.1| hypothetical protein PANDA_011349 [Ailuropoda melanoleuca]
          Length = 291

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/52 (55%), Positives = 36/52 (69%), Gaps = 2/52 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKS 53
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ + G   R  +R+S
Sbjct: 62  NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRRS 113


>gi|208968405|dbj|BAG74041.1| forkhead box D4-like 1 [synthetic construct]
          Length = 439

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/78 (44%), Positives = 43/78 (55%), Gaps = 3/78 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDL--QKLEEGGGRYRNVRRKSSDIQHRKQ 61
           NSIRHNLSLN CFVK+PR   +PGKG +W LD   Q + + G   R  R++    Q    
Sbjct: 150 NSIRHNLSLNDCFVKIPREPGRPGKGNYWSLDPASQDMFDNGSFLRR-RKRFQRHQPTPG 208

Query: 62  AHRPKPAPSENLNTAYTN 79
           AH P P P    + A  N
Sbjct: 209 AHLPHPFPLPAAHAALHN 226


>gi|9738905|gb|AAF97842.1|U37276_1 winged helix protein CWH-5, partial [Gallus gallus]
          Length = 108

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDL---QKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 56  NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQR 105


>gi|70569546|dbj|BAE06432.1| transcription factor protein [Ciona intestinalis]
          Length = 235

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 33/50 (66%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR 51
           NSIRH+LS N CFVKVPRS D+PGKG +W L  D   + E G   R  +R
Sbjct: 170 NSIRHSLSFNDCFVKVPRSPDKPGKGSYWSLHPDAGNMFENGCYLRRQKR 219


>gi|1388160|gb|AAB02820.1| interleukin enhancer binding factor 1 [Homo sapiens]
          Length = 655

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 299 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPR 348


>gi|312084020|ref|XP_003144102.1| hypothetical protein LOAG_08523 [Loa loa]
 gi|307760734|gb|EFO19968.1| hypothetical protein LOAG_08523 [Loa loa]
          Length = 181

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 49/93 (52%), Gaps = 12/93 (12%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVRRK------SS 54
           NS+RHNLS N CFVK+PR  D+PGKG +W +    L   E G    R  R K      S 
Sbjct: 36  NSLRHNLSFNDCFVKIPRRPDKPGKGSYWAVHPHALGMFENGSCLRRRKRFKVQTYGTSE 95

Query: 55  DIQH---RKQAHRPKPAPSENLNTAYTNNNSIA 84
           D+QH   +   H+P  +P + L   +  ++ I+
Sbjct: 96  DLQHPLPKLTYHQPPCSPLQWLFPTHLPSSVIS 128


>gi|335297203|ref|XP_003357968.1| PREDICTED: forkhead box protein K2-like [Sus scrofa]
          Length = 656

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 302 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPR 351


>gi|308486119|ref|XP_003105257.1| hypothetical protein CRE_21246 [Caenorhabditis remanei]
 gi|308256765|gb|EFP00718.1| hypothetical protein CRE_21246 [Caenorhabditis remanei]
          Length = 499

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 40/109 (36%), Positives = 55/109 (50%), Gaps = 15/109 (13%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD------------LQKLEEGGGRYRNVRR 51
           NSIRH+LS N CFVKV RS D+PGKG FW L             L++ +    + R   R
Sbjct: 342 NSIRHSLSFNDCFVKVARSPDKPGKGSFWTLHEHCGNMFENGCYLRRQKRFKVKEREPSR 401

Query: 52  KSSDIQHRKQAHRPK-PAPSENLNTAYTNNNSIAP--GENLNKLEDKLD 97
           K  +   ++Q H PK     E+ N + T++    P   +  +KLE K D
Sbjct: 402 KKRNAHSQQQQHVPKIEIKEEDTNVSSTSSLGAYPMIAQTASKLEAKED 450


>gi|119610208|gb|EAW89802.1| forkhead box K2, isoform CRA_c [Homo sapiens]
          Length = 471

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 115 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPR 164


>gi|82706202|gb|ABB89485.1| forkhead transcription factor I [Strongylocentrotus purpuratus]
          Length = 316

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/51 (52%), Positives = 36/51 (70%), Gaps = 2/51 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRK 52
           NSIRHNLSLN CF+KVPR+ + PGKG +W LD   +K+ + G   R  +R+
Sbjct: 142 NSIRHNLSLNDCFIKVPRADNDPGKGHYWTLDPNCEKMFDNGNFRRKRKRR 192


>gi|327290527|ref|XP_003229974.1| PREDICTED: hypothetical protein LOC100555310 [Anolis carolinensis]
          Length = 479

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLN+CFVK+PR   +PGKG FW LD
Sbjct: 147 NSIRHNLSLNECFVKMPRDDKKPGKGSFWALD 178


>gi|195504521|ref|XP_002099115.1| GE23556 [Drosophila yakuba]
 gi|194185216|gb|EDW98827.1| GE23556 [Drosophila yakuba]
          Length = 374

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 32/50 (64%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLE--EGGGRYRNVRR 51
           NS+RHNLS N CF+KVPR  D+PGKG +W L  Q  +  E G   R  +R
Sbjct: 59  NSLRHNLSFNDCFIKVPRRPDRPGKGAYWALHPQAFDMFENGSLLRRRKR 108


>gi|355569054|gb|EHH25335.1| hypothetical protein EGK_09135, partial [Macaca mulatta]
 gi|355754484|gb|EHH58449.1| hypothetical protein EGM_08306, partial [Macaca fascicularis]
          Length = 533

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 177 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPR 226


>gi|313213355|emb|CBY37180.1| unnamed protein product [Oikopleura dioica]
          Length = 382

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 23/32 (71%), Positives = 28/32 (87%)

Query: 4  NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
          NSIRHNLSLN+CFVK+PR + +PGKG +W LD
Sbjct: 48 NSIRHNLSLNECFVKIPRDEKKPGKGSYWTLD 79


>gi|238054001|ref|NP_001153921.1| forkhead box B1.2 [Oryzias latipes]
 gi|226441705|gb|ACO57455.1| forkhead box B1.2 [Oryzias latipes]
          Length = 313

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 32/50 (64%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR 51
           NS+RHNLS N CF+K+PR  DQPGKG FW L  +   + E G   R  +R
Sbjct: 59  NSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPNCGDMFENGSFLRRRKR 108


>gi|170041990|ref|XP_001848727.1| conserved hypothetical protein [Culex quinquefasciatus]
 gi|167865539|gb|EDS28922.1| conserved hypothetical protein [Culex quinquefasciatus]
          Length = 781

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/70 (47%), Positives = 45/70 (64%), Gaps = 8/70 (11%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD----LQKLEEGGGRYRNVRRKSSDIQHR 59
           NSIRHNLSLN+ F+KVPR +D+PGKG FW++D    L+ +++    YR  R++ S    R
Sbjct: 612 NSIRHNLSLNRYFIKVPRLQDEPGKGSFWRIDPNSELKLIDQS---YRKRRQRGSQC-FR 667

Query: 60  KQAHRPKPAP 69
                PK AP
Sbjct: 668 TPYGMPKSAP 677


>gi|47219530|emb|CAG09884.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 399

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 24/31 (77%), Positives = 26/31 (83%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL 34
           NSIRH+LS N CFVKVPRS D+PGKG FW L
Sbjct: 195 NSIRHSLSFNDCFVKVPRSPDKPGKGSFWTL 225


>gi|410898790|ref|XP_003962880.1| PREDICTED: forkhead box protein I1c-like [Takifugu rubripes]
          Length = 398

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/54 (55%), Positives = 38/54 (70%), Gaps = 3/54 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSD 55
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ +  G +R  R++ SD
Sbjct: 184 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFD-NGNFRRKRKRRSD 236


>gi|335308586|ref|XP_003361292.1| PREDICTED: forkhead box protein B1-like [Sus scrofa]
          Length = 509

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 31/67 (46%), Positives = 36/67 (53%), Gaps = 4/67 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRRKSSDIQHRKQ 61
           NS+RHNLS N CF+K+PR  DQPGKG FW L      + E G   R  RRK   +     
Sbjct: 59  NSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPSCGDMFENGSFLR--RRKRFKVLKSDH 116

Query: 62  AHRPKPA 68
               KPA
Sbjct: 117 LAPSKPA 123


>gi|238054005|ref|NP_001153923.1| forkhead box C1a [Oryzias latipes]
 gi|226441709|gb|ACO57457.1| forkhead box C1a [Oryzias latipes]
          Length = 465

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/61 (52%), Positives = 37/61 (60%), Gaps = 3/61 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVRRKSSDIQHRK 60
           NSIRHNLSLN+CFVKVPR   +PGKG +W LD       E G    R  R K  D+Q  K
Sbjct: 117 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVQREK 176

Query: 61  Q 61
           +
Sbjct: 177 E 177


>gi|354467814|ref|XP_003496363.1| PREDICTED: forkhead box protein K1-like [Cricetulus griseus]
          Length = 638

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 256 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQR 305


>gi|161611750|gb|AAI55933.1| LOC100127318 protein [Xenopus laevis]
          Length = 397

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 33/50 (66%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR 51
           NSIRH+LS N CF+KVPRS D+PGKG FW L  D   + E G   R  +R
Sbjct: 158 NSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKR 207


>gi|99031909|pdb|2C6Y|A Chain A, Crystal Structure Of Interleukin Enhancer-Binding Factor
          1 Bound To Dna
 gi|99031910|pdb|2C6Y|B Chain B, Crystal Structure Of Interleukin Enhancer-Binding Factor
          1 Bound To Dna
          Length = 111

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 23/32 (71%), Positives = 30/32 (93%)

Query: 4  NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
          NSIRHNLSLN+ F+KVPRS+++PGKG FW++D
Sbjct: 62 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRID 93


>gi|440895969|gb|ELR48021.1| Forkhead box protein K2, partial [Bos grunniens mutus]
          Length = 520

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 164 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPR 213


>gi|432119128|gb|ELK38348.1| Forkhead box protein K2 [Myotis davidii]
          Length = 522

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 167 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPR 216


>gi|281354395|gb|EFB29979.1| hypothetical protein PANDA_016124 [Ailuropoda melanoleuca]
          Length = 520

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 164 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPR 213


>gi|114149302|sp|P84961.1|FXA2B_XENLA RecName: Full=Forkhead box protein A2-B; Short=FoxA2-B;
           Short=FoxA2b; AltName: Full=Fork head domain-related
           protein 3'; Short=xFD-3'; AltName: Full=Hepatocyte
           nuclear factor 3-beta homolog B; Short=HNF-3-beta-B;
           Short=HNF3-beta homolog B; Short=HNF3-beta-B;
           Short=xHNF3-beta-B
          Length = 433

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/54 (53%), Positives = 34/54 (62%), Gaps = 2/54 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRRKSSD 55
           NSIRH+LS N CF+KVPRS D+PGKG FW L  D   + E G   R  +R   D
Sbjct: 193 NSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCD 246


>gi|431838543|gb|ELK00475.1| Forkhead box protein C2 [Pteropus alecto]
          Length = 321

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/74 (47%), Positives = 43/74 (58%), Gaps = 5/74 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVRRKSSDIQHRK 60
           NSIRHNLSLN+CFVKVPR   +PGKG +W LD       E G    R  R K  D+   K
Sbjct: 118 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVPKEK 177

Query: 61  Q--AHRPKPAPSEN 72
           +  AH  +P P+ +
Sbjct: 178 EERAHLKEPPPAAS 191


>gi|326919631|ref|XP_003206083.1| PREDICTED: forkhead box protein I1c-like [Meleagris gallopavo]
          Length = 248

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/52 (55%), Positives = 36/52 (69%), Gaps = 2/52 (3%)

Query: 4  NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKS 53
          NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ + G   R  +R+S
Sbjct: 30 NSIRHNLSLNDCFRKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRRS 81


>gi|291413667|ref|XP_002723092.1| PREDICTED: forkhead box K2 [Oryctolagus cuniculus]
          Length = 537

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 180 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLVEQAFRKRRPR 229


>gi|195441602|ref|XP_002068594.1| GK20555 [Drosophila willistoni]
 gi|194164679|gb|EDW79580.1| GK20555 [Drosophila willistoni]
          Length = 812

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/66 (45%), Positives = 39/66 (59%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEGGGRYRNVRRKSSDIQHRKQAH 63
           NSIRHNLSLN+ F+KV RS+D+PGKG FW++D     +        RR+ S    R    
Sbjct: 542 NSIRHNLSLNRYFIKVARSQDEPGKGSFWRIDPDSGAKLIDHSYKKRRQRSSQGFRPPYG 601

Query: 64  RPKPAP 69
            P+ AP
Sbjct: 602 MPRSAP 607


>gi|195151673|ref|XP_002016763.1| GL21898 [Drosophila persimilis]
 gi|194111820|gb|EDW33863.1| GL21898 [Drosophila persimilis]
          Length = 379

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 32/50 (64%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLE--EGGGRYRNVRR 51
           NS+RHNLS N CF+KVPR  D+PGKG +W L  Q  +  E G   R  +R
Sbjct: 59  NSLRHNLSFNDCFIKVPRRPDRPGKGAYWALHPQAFDMFENGSLLRRRKR 108


>gi|133777149|gb|AAI03887.2| FOXD4 protein [Homo sapiens]
          Length = 395

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/78 (44%), Positives = 43/78 (55%), Gaps = 3/78 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDL--QKLEEGGGRYRNVRRKSSDIQHRKQ 61
           NSIRHNLSLN CFVK+PR   +PGKG +W LD   Q + + G   R  R++    Q    
Sbjct: 149 NSIRHNLSLNDCFVKIPREPGRPGKGNYWSLDPASQDMFDNGSFLRR-RKRFQRHQPTPG 207

Query: 62  AHRPKPAPSENLNTAYTN 79
           AH P P P    + A  N
Sbjct: 208 AHLPHPFPLPAAHAALHN 225


>gi|157134848|ref|XP_001656472.1| forkhead protein/ forkhead protein domain [Aedes aegypti]
 gi|108881332|gb|EAT45557.1| AAEL003163-PA [Aedes aegypti]
          Length = 435

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 33/50 (66%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR 51
           NSIRH+LS N CFVKVPR+ D+PGKG FW L  D   + E G   R  +R
Sbjct: 196 NSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHPDSGNMFENGCYLRRQKR 245


>gi|449273581|gb|EMC83065.1| Forkhead box protein I1c, partial [Columba livia]
          Length = 257

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/52 (55%), Positives = 36/52 (69%), Gaps = 2/52 (3%)

Query: 4  NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKS 53
          NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ + G   R  +R+S
Sbjct: 39 NSIRHNLSLNDCFRKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRRS 90


>gi|391338816|ref|XP_003743751.1| PREDICTED: silk gland factor 1-like [Metaseiulus occidentalis]
          Length = 392

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 39/96 (40%), Positives = 47/96 (48%), Gaps = 23/96 (23%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR---------- 51
           NSIRH+LS N CFVKVPR+ D+PGKG FW L  D   + E G   R  +R          
Sbjct: 145 NSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCEKRENPL 204

Query: 52  ---------KSSDIQHRKQA--HRPKPAPSENLNTA 76
                    KSS   H+KQA    P+   SE+  T 
Sbjct: 205 TRSSGAHQTKSSHSSHKKQAVLQNPQNGGSEHTATG 240


>gi|355567846|gb|EHH24187.1| Forkhead box protein B2 [Macaca mulatta]
          Length = 254

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 32/50 (64%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR 51
           NS+RHNLS N CF+K+PR  DQPGKG FW L  D   + E G   R  +R
Sbjct: 59  NSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPDCGDMFENGSFLRRRKR 108


>gi|354468909|ref|XP_003496892.1| PREDICTED: forkhead box protein K2-like [Cricetulus griseus]
          Length = 707

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 374 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLVEQAFRKRRPR 423


>gi|195354766|ref|XP_002043867.1| GM17800 [Drosophila sechellia]
 gi|194129105|gb|EDW51148.1| GM17800 [Drosophila sechellia]
          Length = 372

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 32/50 (64%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLE--EGGGRYRNVRR 51
           NS+RHNLS N CF+KVPR  D+PGKG +W L  Q  +  E G   R  +R
Sbjct: 59  NSLRHNLSFNDCFIKVPRRPDRPGKGAYWALHPQAFDMFENGSLLRRRKR 108


>gi|395853566|ref|XP_003799276.1| PREDICTED: forkhead box protein I3, partial [Otolemur garnettii]
          Length = 316

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/52 (55%), Positives = 36/52 (69%), Gaps = 2/52 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKS 53
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ + G   R  +R+S
Sbjct: 87  NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRRS 138


>gi|348505864|ref|XP_003440480.1| PREDICTED: forkhead box protein B1-like [Oreochromis niloticus]
          Length = 313

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 32/50 (64%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR 51
           NS+RHNLS N CF+K+PR  DQPGKG FW L  +   + E G   R  +R
Sbjct: 59  NSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPNCGDMFENGSFLRRRKR 108


>gi|195445826|ref|XP_002070503.1| GK10997 [Drosophila willistoni]
 gi|194166588|gb|EDW81489.1| GK10997 [Drosophila willistoni]
          Length = 652

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 33/50 (66%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR 51
           NSIRH+LS N CFVK+PR+ D+PGKG FW L  D   + E G   R  +R
Sbjct: 225 NSIRHSLSFNDCFVKIPRTPDKPGKGSFWTLHPDSGNMFENGCYLRRQKR 274


>gi|17977684|ref|NP_524495.1| forkhead domain 96Ca [Drosophila melanogaster]
 gi|13124725|sp|P32028.2|FD4_DROME RecName: Full=Fork head domain-containing protein FD4
 gi|7301266|gb|AAF56396.1| forkhead domain 96Ca [Drosophila melanogaster]
 gi|115646684|gb|ABJ17087.1| RT01156p [Drosophila melanogaster]
          Length = 372

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 32/50 (64%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLE--EGGGRYRNVRR 51
           NS+RHNLS N CF+KVPR  D+PGKG +W L  Q  +  E G   R  +R
Sbjct: 59  NSLRHNLSFNDCFIKVPRRPDRPGKGAYWALHPQAFDMFENGSLLRRRKR 108


>gi|380018923|ref|XP_003693368.1| PREDICTED: uncharacterized protein LOC100864351 [Apis florea]
          Length = 365

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 70/148 (47%), Gaps = 23/148 (15%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL---DLQKLEEGGGRYRNVRRK-------- 52
           NS+RHNLS N CF+KVPR   +PGKG +W L    L   E G    R  R K        
Sbjct: 59  NSLRHNLSFNDCFIKVPRGPHRPGKGAYWALHPAALSMFENGSLLRRRKRFKLHKPDKEL 118

Query: 53  -SSDIQHRKQAHRP-----KPAPSENLNTAYTNNNSIAPGENLNKLEDKLDD-TLMESEI 105
             S++Q    A  P      P  S N N A T++ ++A   NL++L D L    L E  +
Sbjct: 119 LKSELQALASAMPPPHSESSPVLSINPN-AQTSSLTVA---NLHRLRDDLLRWELQERRL 174

Query: 106 SMTDDIDEDLILSNILLSGDSYWIHEPE 133
           +MT   +     +    +G SY++  PE
Sbjct: 175 AMTSGGNSSPSFTTP-EAGSSYYLLSPE 201


>gi|1199529|emb|CAA63244.1| MFH-1 [Mus musculus]
          Length = 493

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 38/80 (47%), Positives = 44/80 (55%), Gaps = 6/80 (7%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVRRKSSDIQHRK 60
           NSIRHNLSLN+CFVKVPR   +PGKG +W LD       E G    R  R K  D+   K
Sbjct: 116 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVPKDK 175

Query: 61  Q--AHRPKPAPSENLNTAYT 78
           +  AH  +P PS     A T
Sbjct: 176 EERAHLKEP-PSTTAKGAPT 194


>gi|449272824|gb|EMC82548.1| Forkhead box protein J2 [Columba livia]
          Length = 545

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCF KVPR +D PGKG +W +D
Sbjct: 115 NSIRHNLSLNKCFRKVPRPRDDPGKGSYWTID 146


>gi|195166487|ref|XP_002024066.1| GL22763 [Drosophila persimilis]
 gi|194107421|gb|EDW29464.1| GL22763 [Drosophila persimilis]
          Length = 742

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/66 (45%), Positives = 39/66 (59%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEGGGRYRNVRRKSSDIQHRKQAH 63
           NSIRHNLSLN+ F+KV RS+D+PGKG FW++D     +        RR+ S    R    
Sbjct: 494 NSIRHNLSLNRYFIKVARSQDEPGKGSFWRIDPDSGAKLIDHSYKKRRQRSSQGFRPPYG 553

Query: 64  RPKPAP 69
            P+ AP
Sbjct: 554 MPRSAP 559


>gi|129270185|ref|NP_944599.2| forkhead box I3a [Danio rerio]
 gi|126631958|gb|AAI33873.1| Forkhead box I3a [Danio rerio]
          Length = 353

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/55 (52%), Positives = 36/55 (65%), Gaps = 2/55 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDI 56
           NSIRHNLSLN CF+KVPR    PGKG +W LD   +K+ + G   R  +RKS  +
Sbjct: 162 NSIRHNLSLNDCFMKVPRDDSDPGKGNYWTLDPNCEKMFDNGNFRRKRKRKSDSL 216


>gi|56972152|gb|AAH88590.1| foxa2 protein [Xenopus (Silurana) tropicalis]
          Length = 429

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 33/50 (66%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR 51
           NSIRH+LS N CF+KVPRS D+PGKG FW L  D   + E G   R  +R
Sbjct: 190 NSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKR 239


>gi|363740726|ref|XP_425369.3| PREDICTED: forkhead box protein K2 [Gallus gallus]
          Length = 535

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 179 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPR 228


>gi|345496496|ref|XP_001601800.2| PREDICTED: hypothetical protein LOC100117617 [Nasonia vitripennis]
          Length = 503

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLN+CFVKVPR   +PGKG +W LD
Sbjct: 117 NSIRHNLSLNECFVKVPRDDKKPGKGSYWSLD 148


>gi|387593256|gb|EIJ88280.1| forkhead transcription factor [Nematocida parisii ERTm3]
 gi|387596032|gb|EIJ93654.1| forkhead transcription factor [Nematocida parisii ERTm1]
          Length = 217

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/72 (41%), Positives = 43/72 (59%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEGGGRYRNVRRKSSDIQHRKQAH 63
           NSIRHNLSLNKCF K+PRS + PGKG +W +D + L          +++  + + +K   
Sbjct: 86  NSIRHNLSLNKCFYKIPRSNNDPGKGSYWTVDSEYLNVFNPNNPKTKKECRNDREKKYQD 145

Query: 64  RPKPAPSENLNT 75
             K + S+ LNT
Sbjct: 146 VEKSSFSDILNT 157


>gi|440911587|gb|ELR61236.1| Hepatocyte nuclear factor 3-beta [Bos grunniens mutus]
          Length = 378

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/51 (54%), Positives = 34/51 (66%), Gaps = 2/51 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRRK 52
           NSIRH+LS N CF+KVPRS D+PGKG FW L  D   + E G   R  +R+
Sbjct: 213 NSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRQ 263


>gi|623038|gb|AAA99459.1| putative, partial [Gallus gallus]
          Length = 411

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/56 (51%), Positives = 35/56 (62%), Gaps = 2/56 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRRKSSDIQ 57
           NSIRH+LS N CF+KVPRS D+PGKG FW L  D   + E G   R  +R   + Q
Sbjct: 170 NSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCEKQ 225


>gi|47209554|emb|CAF89990.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 187

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/32 (81%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCFVKVPR  D PGKG +W LD
Sbjct: 72  NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLD 103


>gi|45361699|ref|NP_989423.1| forkhead box protein A2 [Xenopus (Silurana) tropicalis]
 gi|82240431|sp|Q7T1R4.1|FOXA2_XENTR RecName: Full=Forkhead box protein A2; Short=FoxA2
 gi|32442470|gb|AAP82293.1| fork head transcription factor FoxA2 [Xenopus (Silurana)
           tropicalis]
 gi|89271896|emb|CAJ82886.1| forkhead box A2 [Xenopus (Silurana) tropicalis]
 gi|213624184|gb|AAI70757.1| forkhead box A2 [Xenopus (Silurana) tropicalis]
 gi|213627438|gb|AAI71324.1| forkhead box A2 [Xenopus (Silurana) tropicalis]
          Length = 434

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 33/50 (66%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR 51
           NSIRH+LS N CF+KVPRS D+PGKG FW L  D   + E G   R  +R
Sbjct: 195 NSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKR 244


>gi|159032068|ref|NP_038547.2| forkhead box protein C2 [Mus musculus]
 gi|3041714|sp|Q61850.2|FOXC2_MOUSE RecName: Full=Forkhead box protein C2; AltName: Full=Brain factor
           3; Short=BF-3; AltName: Full=Forkhead-related protein
           FKHL14; AltName: Full=Mesenchyme fork head protein 1;
           Short=MFH-1 protein; AltName: Full=Transcription factor
           FKH-14
 gi|1835130|emb|CAA52192.1| mesenchyme fork head-1 protein [Mus musculus]
 gi|1869969|emb|CAA69399.1| mesenchyme fork head-1 protein [Mus musculus]
 gi|148679706|gb|EDL11653.1| forkhead box C2 [Mus musculus]
 gi|223459990|gb|AAI39209.1| Forkhead box C2 [Mus musculus]
          Length = 494

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 38/80 (47%), Positives = 44/80 (55%), Gaps = 6/80 (7%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVRRKSSDIQHRK 60
           NSIRHNLSLN+CFVKVPR   +PGKG +W LD       E G    R  R K  D+   K
Sbjct: 117 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVPKDK 176

Query: 61  Q--AHRPKPAPSENLNTAYT 78
           +  AH  +P PS     A T
Sbjct: 177 EERAHLKEP-PSTTAKGAPT 195


>gi|359318861|ref|XP_850507.2| PREDICTED: LOW QUALITY PROTEIN: forkhead box protein B2 [Canis
           lupus familiaris]
          Length = 434

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/62 (48%), Positives = 36/62 (58%), Gaps = 4/62 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRRKSSDIQHRKQ 61
           NS+RHNLS N CF+K+PR  DQPGKG FW L  D   + E G   R  RRK   +   + 
Sbjct: 59  NSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPDCGDMFENGSFLR--RRKRFKVLRAEH 116

Query: 62  AH 63
            H
Sbjct: 117 TH 118


>gi|194908992|ref|XP_001981874.1| GG11359 [Drosophila erecta]
 gi|190656512|gb|EDV53744.1| GG11359 [Drosophila erecta]
          Length = 373

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 32/50 (64%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLE--EGGGRYRNVRR 51
           NS+RHNLS N CF+KVPR  D+PGKG +W L  Q  +  E G   R  +R
Sbjct: 59  NSLRHNLSFNDCFIKVPRRPDRPGKGAYWALHPQAFDMFENGSLLRRRKR 108


>gi|49170090|ref|NP_990101.1| forkhead box A2 [Gallus gallus]
 gi|4895071|gb|AAD32711.1|AF150749_1 hepatocyte nuclear factor-3beta [Gallus gallus]
          Length = 438

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/56 (51%), Positives = 35/56 (62%), Gaps = 2/56 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRRKSSDIQ 57
           NSIRH+LS N CF+KVPRS D+PGKG FW L  D   + E G   R  +R   + Q
Sbjct: 197 NSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCEKQ 252


>gi|288541378|ref|NP_001165629.1| forkhead box protein A2-A [Xenopus laevis]
 gi|82245673|sp|Q91765.1|FXA2A_XENLA RecName: Full=Forkhead box protein A2-A; Short=FoxA2-A;
           Short=FoxA2a; AltName: Full=Fork head domain-related
           protein 3; Short=xFD-3; AltName: Full=Hepatocyte nuclear
           factor 3-beta homolog A; Short=HNF-3-beta-A;
           Short=HNF3-beta homolog A; Short=HNF3-beta-A;
           Short=xHNF3-beta-A; Short=xbeta-1
 gi|409774|gb|AAA20679.1| HNF-3beta [Xenopus laevis]
          Length = 434

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 33/50 (66%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR 51
           NSIRH+LS N CF+KVPRS D+PGKG FW L  D   + E G   R  +R
Sbjct: 195 NSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKR 244


>gi|110759134|ref|XP_001120879.1| PREDICTED: hypothetical protein LOC724979 [Apis mellifera]
          Length = 365

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 70/148 (47%), Gaps = 23/148 (15%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL---DLQKLEEGGGRYRNVRRK-------- 52
           NS+RHNLS N CF+KVPR   +PGKG +W L    L   E G    R  R K        
Sbjct: 59  NSLRHNLSFNDCFIKVPRGPHRPGKGAYWALHPAALSMFENGSLLRRRKRFKLHKPDKEL 118

Query: 53  -SSDIQHRKQAHRP-----KPAPSENLNTAYTNNNSIAPGENLNKLEDKLDD-TLMESEI 105
             S++Q    A  P      P  S N N A T++ ++A   NL++L D L    L E  +
Sbjct: 119 LKSELQALASAMPPPHSESSPVLSINPN-AQTSSLTVA---NLHRLRDDLLRWELQERRL 174

Query: 106 SMTDDIDEDLILSNILLSGDSYWIHEPE 133
           +MT   +     +    +G SY++  PE
Sbjct: 175 AMTSGGNSSPSFTTP-EAGSSYYLLSPE 201


>gi|332813754|ref|XP_525808.3| PREDICTED: forkhead box protein I3, partial [Pan troglodytes]
          Length = 393

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/52 (55%), Positives = 36/52 (69%), Gaps = 2/52 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKS 53
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ + G   R  +R+S
Sbjct: 164 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRRS 215


>gi|351696510|gb|EHA99428.1| Forkhead box protein I3 [Heterocephalus glaber]
          Length = 282

 Score = 59.3 bits (142), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/52 (55%), Positives = 36/52 (69%), Gaps = 2/52 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKS 53
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ + G   R  +R+S
Sbjct: 58  NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRRS 109


>gi|338719536|ref|XP_003364019.1| PREDICTED: LOW QUALITY PROTEIN: forkhead box protein B2-like [Equus
           caballus]
          Length = 300

 Score = 59.3 bits (142), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/74 (45%), Positives = 41/74 (55%), Gaps = 11/74 (14%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRRKSSDIQHR-- 59
           NS+RHNLS N CF+K+PR  DQPGKG FW L  D   + E G   R  RRK   +  R  
Sbjct: 59  NSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPDCGDMFENGSFLR--RRKRFKVAARGP 116

Query: 60  -----KQAHRPKPA 68
                ++A R  PA
Sbjct: 117 HSPCTREAPRAAPA 130


>gi|170054988|ref|XP_001863379.1| fork head domain-containing protein FD4 [Culex quinquefasciatus]
 gi|167875123|gb|EDS38506.1| fork head domain-containing protein FD4 [Culex quinquefasciatus]
          Length = 360

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 32/50 (64%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLE--EGGGRYRNVRR 51
           NS+RHNLS N CF+KVPR  D+PGKG +W L  Q  +  E G   R  +R
Sbjct: 59  NSLRHNLSFNDCFIKVPRRPDRPGKGAYWALHPQAFDMFENGSLLRRRKR 108


>gi|296223323|ref|XP_002757613.1| PREDICTED: forkhead box protein I3 [Callithrix jacchus]
          Length = 346

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 29/52 (55%), Positives = 36/52 (69%), Gaps = 2/52 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKS 53
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ + G   R  +R+S
Sbjct: 118 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRRS 169


>gi|351708324|gb|EHB11243.1| Forkhead box protein J2 [Heterocephalus glaber]
          Length = 569

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCF KVPR +D PGKG +W +D
Sbjct: 112 NSIRHNLSLNKCFRKVPRPRDDPGKGSYWTID 143


>gi|149055129|gb|EDM06946.1| forkhead box K2 (predicted), isoform CRA_b [Rattus norvegicus]
          Length = 163

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 23/32 (71%), Positives = 30/32 (93%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D
Sbjct: 115 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRID 146


>gi|122892621|gb|ABM67374.1| FOXJ2 [Hylobates klossii]
          Length = 95

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4  NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
          NSIRHNLSLNKCF KVPR +D PGKG +W +D
Sbjct: 1  NSIRHNLSLNKCFRKVPRPRDDPGKGSYWTID 32


>gi|448444|prf||1917213A MFH-1 protein
          Length = 461

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 38/80 (47%), Positives = 44/80 (55%), Gaps = 6/80 (7%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVRRKSSDIQHRK 60
           NSIRHNLSLN+CFVKVPR   +PGKG +W LD       E G    R  R K  D+   K
Sbjct: 84  NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVPKDK 143

Query: 61  Q--AHRPKPAPSENLNTAYT 78
           +  AH  +P PS     A T
Sbjct: 144 EERAHLKEP-PSTTAKGAPT 162


>gi|332239284|ref|XP_003268836.1| PREDICTED: forkhead box protein I3 [Nomascus leucogenys]
          Length = 420

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 29/52 (55%), Positives = 36/52 (69%), Gaps = 2/52 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKS 53
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ + G   R  +R+S
Sbjct: 191 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRRS 242


>gi|313214931|emb|CBY41144.1| unnamed protein product [Oikopleura dioica]
 gi|313234919|emb|CBY24864.1| unnamed protein product [Oikopleura dioica]
          Length = 383

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 6/51 (11%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRK 52
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ + G    N RRK
Sbjct: 136 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNG----NFRRK 182


>gi|195038954|ref|XP_001990840.1| GH18035 [Drosophila grimshawi]
 gi|193895036|gb|EDV93902.1| GH18035 [Drosophila grimshawi]
          Length = 395

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 32/50 (64%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLE--EGGGRYRNVRR 51
           NS+RHNLS N CF+KVPR  D+PGKG +W L  Q  +  E G   R  +R
Sbjct: 59  NSLRHNLSFNDCFIKVPRRPDRPGKGAYWALHPQAFDMFENGSLLRRRKR 108


>gi|156379762|ref|XP_001631625.1| predicted protein [Nematostella vectensis]
 gi|156218668|gb|EDO39562.1| predicted protein [Nematostella vectensis]
          Length = 262

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 28/54 (51%), Positives = 33/54 (61%), Gaps = 2/54 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRRKSSD 55
           NS+RHNLS N CFVK+PR  DQPGKG  W L  D   + E G   R  +R  S+
Sbjct: 59  NSLRHNLSFNDCFVKIPRRPDQPGKGSLWALHPDCGTMFENGSFLRRRKRFKSE 112


>gi|327275375|ref|XP_003222449.1| PREDICTED: forkhead box protein I1c-like [Anolis carolinensis]
          Length = 396

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 30/54 (55%), Positives = 38/54 (70%), Gaps = 3/54 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSD 55
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ +  G +R  R++ SD
Sbjct: 184 NSIRHNLSLNDCFRKVPRDEDDPGKGNYWTLDPNCEKMFD-NGNFRRKRKRRSD 236


>gi|91082603|ref|XP_968211.1| PREDICTED: similar to forkhead protein/ forkhead protein domain
           [Tribolium castaneum]
 gi|270015000|gb|EFA11448.1| hypothetical protein TcasGA2_TC013630 [Tribolium castaneum]
          Length = 326

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 32/50 (64%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLE--EGGGRYRNVRR 51
           NS+RHNLS N CF+K+PR  D+PGKG FW L    L+  E G   R  +R
Sbjct: 59  NSLRHNLSFNDCFIKIPRRPDRPGKGAFWALHPSALDMFENGSFLRRRKR 108


>gi|348569086|ref|XP_003470329.1| PREDICTED: forkhead box protein J2-like [Cavia porcellus]
          Length = 571

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCF KVPR +D PGKG +W +D
Sbjct: 112 NSIRHNLSLNKCFRKVPRPRDDPGKGSYWTID 143


>gi|296203464|ref|XP_002748915.1| PREDICTED: forkhead box protein K2 [Callithrix jacchus]
          Length = 585

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 229 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPR 278


>gi|197245814|gb|AAI68919.1| Foxk2 protein [Rattus norvegicus]
          Length = 514

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 159 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLVEQAFRKRRPR 208


>gi|354483541|ref|XP_003503951.1| PREDICTED: forkhead box protein I3-like [Cricetulus griseus]
          Length = 322

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 29/52 (55%), Positives = 36/52 (69%), Gaps = 2/52 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKS 53
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ + G   R  +R+S
Sbjct: 104 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRRS 155


>gi|344245979|gb|EGW02083.1| Forkhead box protein J2 [Cricetulus griseus]
          Length = 573

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCF KVPR +D PGKG +W +D
Sbjct: 112 NSIRHNLSLNKCFRKVPRPRDDPGKGSYWTID 143


>gi|208431824|ref|NP_001129121.1| forkhead box protein I3 [Homo sapiens]
 gi|229464468|sp|A8MTJ6.3|FOXI3_HUMAN RecName: Full=Forkhead box protein I3
 gi|205362900|tpe|CAR63508.1| TPA: forkhead box I3 [Homo sapiens]
 gi|205362902|tpe|CAR63509.1| TPA: forkhead box I3 [Homo sapiens]
          Length = 420

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 29/52 (55%), Positives = 36/52 (69%), Gaps = 2/52 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKS 53
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ + G   R  +R+S
Sbjct: 191 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRRS 242


>gi|449479086|ref|XP_002187621.2| PREDICTED: forkhead box protein K2, partial [Taeniopygia guttata]
          Length = 579

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 223 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPR 272


>gi|395826753|ref|XP_003786580.1| PREDICTED: forkhead box protein K2 [Otolemur garnettii]
          Length = 532

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 176 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPR 225


>gi|355689115|gb|AER98723.1| forkhead box K2 [Mustela putorius furo]
          Length = 544

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 189 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPR 238


>gi|326912639|ref|XP_003202656.1| PREDICTED: forkhead box protein J2-like [Meleagris gallopavo]
          Length = 541

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCF KVPR +D PGKG +W +D
Sbjct: 112 NSIRHNLSLNKCFRKVPRPRDDPGKGSYWTID 143


>gi|449283120|gb|EMC89823.1| Forkhead box protein K2, partial [Columba livia]
          Length = 520

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 164 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPR 213


>gi|444727103|gb|ELW67609.1| Forkhead box protein J2 [Tupaia chinensis]
          Length = 652

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCF KVPR +D PGKG +W +D
Sbjct: 202 NSIRHNLSLNKCFRKVPRPRDDPGKGSYWTID 233


>gi|297261736|ref|XP_001118419.2| PREDICTED: forkhead box protein J2-like [Macaca mulatta]
          Length = 652

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCF KVPR +D PGKG +W +D
Sbjct: 190 NSIRHNLSLNKCFRKVPRPRDDPGKGSYWTID 221


>gi|397481207|ref|XP_003811844.1| PREDICTED: forkhead box protein J2 [Pan paniscus]
          Length = 573

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCF KVPR +D PGKG +W +D
Sbjct: 112 NSIRHNLSLNKCFRKVPRPRDDPGKGSYWTID 143


>gi|397468476|ref|XP_003805906.1| PREDICTED: forkhead box protein I3 [Pan paniscus]
          Length = 589

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 29/52 (55%), Positives = 36/52 (69%), Gaps = 2/52 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKS 53
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ + G   R  +R+S
Sbjct: 360 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRRS 411


>gi|357618423|gb|EHJ71407.1| fork head domain-containing protein FD4 [Danaus plexippus]
          Length = 256

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 32/50 (64%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLE--EGGGRYRNVRR 51
           NS+RHNLS N CFVKVPR  D+PGKG +W L  Q  +  E G   R  +R
Sbjct: 59  NSLRHNLSFNDCFVKVPRRPDRPGKGAYWTLHPQAFDMFENGSLLRRRKR 108


>gi|157819409|ref|NP_001102822.1| forkhead box protein J2 [Rattus norvegicus]
 gi|149049525|gb|EDM01979.1| similar to fork head transcription factor Fhx (predicted) [Rattus
           norvegicus]
          Length = 583

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCF KVPR +D PGKG +W +D
Sbjct: 112 NSIRHNLSLNKCFRKVPRPRDDPGKGSYWTID 143


>gi|327278898|ref|XP_003224196.1| PREDICTED: forkhead box protein J2-like [Anolis carolinensis]
          Length = 533

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCF KVPR +D PGKG +W +D
Sbjct: 112 NSIRHNLSLNKCFRKVPRPRDDPGKGSYWTID 143


>gi|311245932|ref|XP_001925193.2| PREDICTED: forkhead box protein B2-like [Sus scrofa]
          Length = 430

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 32/50 (64%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR 51
           NS+RHNLS N CF+K+PR  DQPGKG FW L  D   + E G   R  +R
Sbjct: 59  NSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPDCGDMFENGSFLRRRKR 108


>gi|296211317|ref|XP_002752354.1| PREDICTED: forkhead box protein J2 [Callithrix jacchus]
          Length = 573

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCF KVPR +D PGKG +W +D
Sbjct: 112 NSIRHNLSLNKCFRKVPRPRDDPGKGSYWTID 143


>gi|256074447|ref|XP_002573536.1| FREAC-7-like protein [Schistosoma mansoni]
 gi|360043920|emb|CCD81466.1| FREAC-7-like protein [Schistosoma mansoni]
          Length = 899

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 35/51 (68%)

Query: 3  VNSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEGGGRYRNVRRKS 53
          +NS+RHNLSLNKCF KVPR K + GKGGFW+++ + ++         RR +
Sbjct: 1  MNSVRHNLSLNKCFEKVPRDKGERGKGGFWRVNPRHIDWLEANLAKCRRSA 51


>gi|118083270|ref|XP_416484.2| PREDICTED: forkhead box protein J2 [Gallus gallus]
          Length = 541

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCF KVPR +D PGKG +W +D
Sbjct: 112 NSIRHNLSLNKCFRKVPRPRDDPGKGSYWTID 143


>gi|114643279|ref|XP_001166729.1| PREDICTED: forkhead box protein J2 isoform 1 [Pan troglodytes]
 gi|410257944|gb|JAA16939.1| forkhead box J2 [Pan troglodytes]
 gi|410341821|gb|JAA39857.1| forkhead box J2 [Pan troglodytes]
 gi|410341823|gb|JAA39858.1| forkhead box J2 [Pan troglodytes]
          Length = 573

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCF KVPR +D PGKG +W +D
Sbjct: 112 NSIRHNLSLNKCFRKVPRPRDDPGKGSYWTID 143


>gi|157133403|ref|XP_001656241.1| forkhead protein/ forkhead protein domain [Aedes aegypti]
 gi|108881578|gb|EAT45803.1| AAEL002951-PA [Aedes aegypti]
          Length = 344

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 32/50 (64%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLE--EGGGRYRNVRR 51
           NS+RHNLS N CF+KVPR  D+PGKG +W L  Q  +  E G   R  +R
Sbjct: 59  NSLRHNLSFNDCFIKVPRRPDRPGKGAYWALHPQAFDMFENGSLLRRRKR 108


>gi|386638|gb|AAB27463.1| mesenchyme fork head 1 [Mus sp.]
          Length = 461

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 38/80 (47%), Positives = 44/80 (55%), Gaps = 6/80 (7%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVRRKSSDIQHRK 60
           NSIRHNLSLN+CFVKVPR   +PGKG +W LD       E G    R  R K  D+   K
Sbjct: 84  NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVPKDK 143

Query: 61  Q--AHRPKPAPSENLNTAYT 78
           +  AH  +P PS     A T
Sbjct: 144 EERAHLKEP-PSTTAKGAPT 162


>gi|403269425|ref|XP_003926741.1| PREDICTED: forkhead box protein J2 [Saimiri boliviensis
           boliviensis]
          Length = 572

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCF KVPR +D PGKG +W +D
Sbjct: 112 NSIRHNLSLNKCFRKVPRPRDDPGKGSYWTID 143


>gi|395515417|ref|XP_003761901.1| PREDICTED: forkhead box protein B2 [Sarcophilus harrisii]
          Length = 218

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 32/50 (64%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR 51
           NS+RHNLS N CF+K+PR  DQPGKG FW L  D   + E G   R  +R
Sbjct: 59  NSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPDCGDMFENGSFLRRRKR 108


>gi|8923842|ref|NP_060886.1| forkhead box protein J2 [Homo sapiens]
 gi|13626933|sp|Q9P0K8.1|FOXJ2_HUMAN RecName: Full=Forkhead box protein J2; AltName: Full=Fork head
           homologous X
 gi|7650180|gb|AAF65927.1|AF155132_1 FOXJ2 forkhead factor [Homo sapiens]
 gi|116496725|gb|AAI26397.1| Forkhead box J2 [Homo sapiens]
 gi|119609048|gb|EAW88642.1| forkhead box J2, isoform CRA_a [Homo sapiens]
 gi|168277604|dbj|BAG10780.1| forkhead box protein J2 [synthetic construct]
 gi|187950329|gb|AAI36306.1| Forkhead box J2 [Homo sapiens]
 gi|313883168|gb|ADR83070.1| forkhead box J2 [synthetic construct]
          Length = 574

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCF KVPR +D PGKG +W +D
Sbjct: 112 NSIRHNLSLNKCFRKVPRPRDDPGKGSYWTID 143


>gi|384941106|gb|AFI34158.1| forkhead box protein J2 [Macaca mulatta]
          Length = 574

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCF KVPR +D PGKG +W +D
Sbjct: 112 NSIRHNLSLNKCFRKVPRPRDDPGKGSYWTID 143


>gi|431905382|gb|ELK10427.1| Forkhead box protein J2 [Pteropus alecto]
          Length = 652

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCF KVPR +D PGKG +W +D
Sbjct: 194 NSIRHNLSLNKCFRKVPRPRDDPGKGSYWTID 225


>gi|42374841|gb|AAS13442.1| forkhead transcription factor [Nematostella vectensis]
          Length = 286

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 30/61 (49%), Positives = 37/61 (60%), Gaps = 6/61 (9%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR----KSSDIQ 57
           NSIRH+LS N CFVKVPRS D+PGKG +W L  +   + E G   R  +R    K  D+ 
Sbjct: 86  NSIRHSLSFNDCFVKVPRSPDRPGKGSYWTLHPECGNMFENGCYLRRQKRFKAEKKPDLS 145

Query: 58  H 58
           H
Sbjct: 146 H 146


>gi|355785854|gb|EHH66037.1| Fork head-like proteinous X [Macaca fascicularis]
          Length = 574

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCF KVPR +D PGKG +W +D
Sbjct: 112 NSIRHNLSLNKCFRKVPRPRDDPGKGSYWTID 143


>gi|26345294|dbj|BAC36298.1| unnamed protein product [Mus musculus]
          Length = 494

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 38/80 (47%), Positives = 44/80 (55%), Gaps = 6/80 (7%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVRRKSSDIQHRK 60
           NSIRHNLSLN+CFVKVPR   +PGKG +W LD       E G    R  R K  D+   K
Sbjct: 117 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVPKDK 176

Query: 61  Q--AHRPKPAPSENLNTAYT 78
           +  AH  +P PS     A T
Sbjct: 177 EERAHIKEP-PSTTAKGAPT 195


>gi|73997228|ref|XP_853187.1| PREDICTED: forkhead box protein J2 isoform 2 [Canis lupus
           familiaris]
          Length = 572

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCF KVPR +D PGKG +W +D
Sbjct: 112 NSIRHNLSLNKCFRKVPRPRDDPGKGSYWTID 143


>gi|18478831|gb|AAL73341.1| FOXD4a [Homo sapiens]
          Length = 439

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 34/78 (43%), Positives = 43/78 (55%), Gaps = 3/78 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDL--QKLEEGGGRYRNVRRKSSDIQHRKQ 61
           NS+RHNLSLN CFVK+PR   +PGKG +W LD   Q + + G   R  R++    Q    
Sbjct: 150 NSVRHNLSLNDCFVKIPREPGRPGKGNYWSLDPASQDMFDNGSFLRR-RKRFQRHQPTPG 208

Query: 62  AHRPKPAPSENLNTAYTN 79
           AH P P P    + A  N
Sbjct: 209 AHLPHPFPLPAAHAALHN 226


>gi|402885048|ref|XP_003905979.1| PREDICTED: forkhead box protein J2 [Papio anubis]
          Length = 574

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCF KVPR +D PGKG +W +D
Sbjct: 112 NSIRHNLSLNKCFRKVPRPRDDPGKGSYWTID 143


>gi|395847524|ref|XP_003796419.1| PREDICTED: forkhead box protein J2 [Otolemur garnettii]
          Length = 577

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCF KVPR +D PGKG +W +D
Sbjct: 112 NSIRHNLSLNKCFRKVPRPRDDPGKGSYWTID 143


>gi|380785913|gb|AFE64832.1| forkhead box protein J2 [Macaca mulatta]
 gi|383410107|gb|AFH28267.1| forkhead box protein J2 [Macaca mulatta]
          Length = 574

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCF KVPR +D PGKG +W +D
Sbjct: 112 NSIRHNLSLNKCFRKVPRPRDDPGKGSYWTID 143


>gi|70569580|dbj|BAE06438.1| transcription factor protein [Ciona intestinalis]
          Length = 467

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 25/32 (78%), Positives = 26/32 (81%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLS NKCFVKVPR  D PGKG +W LD
Sbjct: 143 NSIRHNLSSNKCFVKVPRHYDDPGKGNYWMLD 174


>gi|11230810|ref|NP_068699.1| forkhead box protein J2 [Mus musculus]
 gi|13626888|sp|Q9ES18.1|FOXJ2_MOUSE RecName: Full=Forkhead box protein J2; AltName: Full=Fork head
           homologous X
 gi|11118640|gb|AAG30406.1|AF253052_1 fork head transcription factor Fhx [Mus musculus]
 gi|25955509|gb|AAH40395.1| Forkhead box J2 [Mus musculus]
 gi|148667281|gb|EDK99697.1| forkhead box J2 [Mus musculus]
          Length = 565

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCF KVPR +D PGKG +W +D
Sbjct: 112 NSIRHNLSLNKCFRKVPRPRDDPGKGSYWTID 143


>gi|297691037|ref|XP_002822906.1| PREDICTED: forkhead box protein J2 [Pongo abelii]
          Length = 574

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCF KVPR +D PGKG +W +D
Sbjct: 112 NSIRHNLSLNKCFRKVPRPRDDPGKGSYWTID 143


>gi|189517676|ref|XP_001922858.1| PREDICTED: forkhead box protein K2 isoform 2 [Danio rerio]
          Length = 596

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQ---KLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 257 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPSSEGKLVEQAFRKRRPR 306


>gi|426225578|ref|XP_004006942.1| PREDICTED: forkhead box protein J2 isoform 2 [Ovis aries]
          Length = 577

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCF KVPR +D PGKG +W +D
Sbjct: 112 NSIRHNLSLNKCFRKVPRPRDDPGKGSYWTID 143


>gi|74219582|dbj|BAE29561.1| unnamed protein product [Mus musculus]
          Length = 513

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 227 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLVEQAFRKRRPR 276


>gi|354496211|ref|XP_003510220.1| PREDICTED: forkhead box protein J2 [Cricetulus griseus]
          Length = 555

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCF KVPR +D PGKG +W +D
Sbjct: 112 NSIRHNLSLNKCFRKVPRPRDDPGKGSYWTID 143


>gi|327292130|ref|XP_003230773.1| PREDICTED: hypothetical protein LOC100553614 [Anolis carolinensis]
          Length = 354

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 25/32 (78%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLN CFVKVPR K +PGKG +W LD
Sbjct: 83  NSIRHNLSLNACFVKVPREKGRPGKGSYWTLD 114


>gi|221111730|ref|XP_002158068.1| PREDICTED: uncharacterized protein LOC100208319 [Hydra
           magnipapillata]
          Length = 563

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 23/31 (74%), Positives = 27/31 (87%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL 34
           NSIRHNLSLNKCF K+PR+K  PGKGG+W +
Sbjct: 191 NSIRHNLSLNKCFTKIPRNKGDPGKGGYWTV 221


>gi|194742399|ref|XP_001953690.1| GF17887 [Drosophila ananassae]
 gi|190626727|gb|EDV42251.1| GF17887 [Drosophila ananassae]
          Length = 374

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 32/50 (64%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLE--EGGGRYRNVRR 51
           NS+RHNLS N CF+KVPR  D+PGKG +W L  Q  +  E G   R  +R
Sbjct: 59  NSLRHNLSFNDCFIKVPRRPDRPGKGAYWALHPQAFDMFENGSLLRRRKR 108


>gi|149712488|ref|XP_001498777.1| PREDICTED: forkhead box protein J2 [Equus caballus]
          Length = 572

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCF KVPR +D PGKG +W +D
Sbjct: 112 NSIRHNLSLNKCFRKVPRPRDDPGKGSYWTID 143


>gi|402897686|ref|XP_003911880.1| PREDICTED: forkhead box protein B2 [Papio anubis]
          Length = 431

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 32/50 (64%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR 51
           NS+RHNLS N CF+K+PR  DQPGKG FW L  D   + E G   R  +R
Sbjct: 59  NSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPDCGDMFENGSFLRRRKR 108


>gi|355563961|gb|EHH20461.1| Fork head-like proteinous X [Macaca mulatta]
 gi|387539714|gb|AFJ70484.1| forkhead box protein J2 [Macaca mulatta]
          Length = 574

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCF KVPR +D PGKG +W +D
Sbjct: 112 NSIRHNLSLNKCFRKVPRPRDDPGKGSYWTID 143


>gi|189517674|ref|XP_001922856.1| PREDICTED: forkhead box protein K2 isoform 1 [Danio rerio]
          Length = 597

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQ---KLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 257 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPSSEGKLVEQAFRKRRPR 306


>gi|440894848|gb|ELR47183.1| Forkhead box protein J2 [Bos grunniens mutus]
          Length = 538

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCF KVPR +D PGKG +W +D
Sbjct: 112 NSIRHNLSLNKCFRKVPRPRDDPGKGSYWTID 143


>gi|426225576|ref|XP_004006941.1| PREDICTED: forkhead box protein J2 isoform 1 [Ovis aries]
          Length = 560

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCF KVPR +D PGKG +W +D
Sbjct: 112 NSIRHNLSLNKCFRKVPRPRDDPGKGSYWTID 143


>gi|410963747|ref|XP_003988423.1| PREDICTED: forkhead box protein J2 [Felis catus]
          Length = 572

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCF KVPR +D PGKG +W +D
Sbjct: 112 NSIRHNLSLNKCFRKVPRPRDDPGKGSYWTID 143


>gi|332232583|ref|XP_003265485.1| PREDICTED: LOW QUALITY PROTEIN: forkhead box protein J2 [Nomascus
           leucogenys]
          Length = 573

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCF KVPR +D PGKG +W +D
Sbjct: 112 NSIRHNLSLNKCFRKVPRPRDDPGKGSYWTID 143


>gi|449485135|ref|XP_002190850.2| PREDICTED: forkhead box protein J2 [Taeniopygia guttata]
          Length = 482

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCF KVPR +D PGKG +W +D
Sbjct: 112 NSIRHNLSLNKCFRKVPRPRDDPGKGSYWTID 143


>gi|301787567|ref|XP_002929200.1| PREDICTED: forkhead box protein J2-like [Ailuropoda melanoleuca]
          Length = 541

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCF KVPR +D PGKG +W +D
Sbjct: 112 NSIRHNLSLNKCFRKVPRPRDDPGKGSYWTID 143


>gi|238054027|ref|NP_001153934.1| forkhead box K1 [Oryzias latipes]
 gi|226441740|gb|ACO57472.1| forkhead box K1 [Oryzias latipes]
          Length = 563

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/50 (60%), Positives = 35/50 (70%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDL---QKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KV RS+D+PGKG FW+LD     KL E   R R  R
Sbjct: 337 NSIRHNLSLNRYFLKVARSQDEPGKGSFWRLDSASETKLVEQAFRKRRQR 386


>gi|417402837|gb|JAA48250.1| Putative forkhead/hnf-3-related transcription factor [Desmodus
           rotundus]
          Length = 569

 Score = 59.3 bits (142), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCF KVPR +D PGKG +W +D
Sbjct: 112 NSIRHNLSLNKCFRKVPRPRDDPGKGSYWTID 143


>gi|296482509|tpg|DAA24624.1| TPA: forkhead box I3-like [Bos taurus]
          Length = 414

 Score = 59.3 bits (142), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 29/52 (55%), Positives = 36/52 (69%), Gaps = 2/52 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKS 53
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ + G   R  +R+S
Sbjct: 184 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRRS 235


>gi|259013273|ref|NP_001158426.1| forkhead box A [Saccoglossus kowalevskii]
 gi|196475491|gb|ACG76356.1| forkhead box A protein [Saccoglossus kowalevskii]
          Length = 404

 Score = 59.3 bits (142), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 33/50 (66%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR 51
           NSIRH+LS N CF+KVPR+ D+PGKG FW L  D   + E G   R  +R
Sbjct: 173 NSIRHSLSFNDCFLKVPRTPDRPGKGSFWTLHPDSGNMFENGCYLRRQKR 222


>gi|348501210|ref|XP_003438163.1| PREDICTED: forkhead box protein C1-B-like [Oreochromis niloticus]
          Length = 472

 Score = 59.3 bits (142), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLN+CFVKVPR   +PGKG +W LD
Sbjct: 120 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLD 151


>gi|345304954|ref|XP_001507032.2| PREDICTED: hepatocyte nuclear factor 3-beta-like [Ornithorhynchus
           anatinus]
          Length = 417

 Score = 59.3 bits (142), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 30/56 (53%), Positives = 35/56 (62%), Gaps = 2/56 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRRKSSDIQ 57
           NSIRH+LS N CF+KVPRS D+PGKG FW L  D   + E G   R  +R   D Q
Sbjct: 318 NSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCDKQ 373


>gi|195388582|ref|XP_002052958.1| GJ23595 [Drosophila virilis]
 gi|194151044|gb|EDW66478.1| GJ23595 [Drosophila virilis]
          Length = 392

 Score = 59.3 bits (142), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 32/50 (64%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLE--EGGGRYRNVRR 51
           NS+RHNLS N CF+KVPR  D+PGKG +W L  Q  +  E G   R  +R
Sbjct: 59  NSLRHNLSFNDCFIKVPRRPDRPGKGAYWALHPQAFDMFENGSLLRRRKR 108


>gi|285157676|gb|ADC35033.1| fox/forkhead [Capitella teleta]
          Length = 320

 Score = 59.3 bits (142), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 30/52 (57%), Positives = 33/52 (63%), Gaps = 3/52 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQ---KLEEGGGRYRNVRRK 52
           NSIRHNLSLN CFVKVPR K +PGKG +W LD       + G  R R  R K
Sbjct: 125 NSIRHNLSLNDCFVKVPREKGKPGKGNYWTLDPNCEDMFDHGNYRRRKRRAK 176


>gi|300795601|ref|NP_001179699.1| forkhead box protein J2 [Bos taurus]
 gi|296487187|tpg|DAA29300.1| TPA: forkhead box J2 [Bos taurus]
          Length = 560

 Score = 59.3 bits (142), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCF KVPR +D PGKG +W +D
Sbjct: 112 NSIRHNLSLNKCFRKVPRPRDDPGKGSYWTID 143


>gi|410958608|ref|XP_003985908.1| PREDICTED: forkhead box protein C1 [Felis catus]
          Length = 513

 Score = 59.3 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLN+CFVKVPR   +PGKG +W LD
Sbjct: 273 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLD 304


>gi|281340982|gb|EFB16566.1| hypothetical protein PANDA_019306 [Ailuropoda melanoleuca]
          Length = 512

 Score = 59.3 bits (142), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCF KVPR +D PGKG +W +D
Sbjct: 112 NSIRHNLSLNKCFRKVPRPRDDPGKGSYWTID 143


>gi|425918645|gb|AFY12011.1| FOXA, partial [Priapulus caudatus]
          Length = 299

 Score = 59.3 bits (142), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 33/50 (66%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR 51
           NSIRH+LS N CFVKVPR+ D+PGKG FW L  D   + E G   R  +R
Sbjct: 187 NSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHPDSGNMFENGCYLRRQKR 236


>gi|148228251|ref|NP_001087521.1| forkhead box protein J2 [Xenopus laevis]
 gi|82181765|sp|Q68EZ2.1|FOXJ2_XENLA RecName: Full=Forkhead box protein J2; Short=FoxJ2
 gi|51261471|gb|AAH80056.1| MGC83995 protein [Xenopus laevis]
          Length = 512

 Score = 59.3 bits (142), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCF KVPR +D PGKG +W +D
Sbjct: 105 NSIRHNLSLNKCFRKVPRPRDDPGKGSYWMID 136


>gi|126339947|ref|XP_001364301.1| PREDICTED: forkhead box protein J2 [Monodelphis domestica]
          Length = 561

 Score = 59.3 bits (142), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCF KVPR +D PGKG +W +D
Sbjct: 112 NSIRHNLSLNKCFRKVPRPRDDPGKGSYWTID 143


>gi|397480479|ref|XP_003811509.1| PREDICTED: forkhead box protein B2-like [Pan paniscus]
          Length = 432

 Score = 59.3 bits (142), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 32/50 (64%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR 51
           NS+RHNLS N CF+K+PR  DQPGKG FW L  D   + E G   R  +R
Sbjct: 59  NSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPDCGDMFENGSFLRRRKR 108


>gi|328714562|ref|XP_003245392.1| PREDICTED: hypothetical protein LOC100569272 [Acyrthosiphon pisum]
          Length = 687

 Score = 59.3 bits (142), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 29/54 (53%), Positives = 34/54 (62%), Gaps = 2/54 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRRKSSD 55
           NSIRH+LS N CFVKVPR+ D+PGKG FW L  D   + E G   R  +R   D
Sbjct: 211 NSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKDD 264


>gi|291392831|ref|XP_002712806.1| PREDICTED: forkhead box J2 [Oryctolagus cuniculus]
          Length = 565

 Score = 59.3 bits (142), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCF KVPR +D PGKG +W +D
Sbjct: 112 NSIRHNLSLNKCFRKVPRPRDDPGKGSYWTID 143


>gi|238054003|ref|NP_001153922.1| forkhead box B2 [Oryzias latipes]
 gi|226441707|gb|ACO57456.1| forkhead box B2 [Oryzias latipes]
          Length = 319

 Score = 59.3 bits (142), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 32/50 (64%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR 51
           NS+RHNLS N CF+K+PR  DQPGKG FW L  D   + E G   R  +R
Sbjct: 59  NSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPDCGDMFENGSFLRRRKR 108


>gi|344277872|ref|XP_003410721.1| PREDICTED: forkhead box protein J2 [Loxodonta africana]
          Length = 571

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCF KVPR +D PGKG +W +D
Sbjct: 112 NSIRHNLSLNKCFRKVPRPRDDPGKGSYWTID 143


>gi|449282509|gb|EMC89342.1| Forkhead box protein L1, partial [Columba livia]
          Length = 89

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/37 (70%), Positives = 30/37 (81%)

Query: 4  NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLE 40
          NSIRHNLSLN CFVKVPR K +PGKG +W LD + L+
Sbjct: 47 NSIRHNLSLNDCFVKVPREKGRPGKGSYWTLDPRCLD 83


>gi|349501020|ref|NP_001005675.2| forkhead box protein J2 [Xenopus (Silurana) tropicalis]
 gi|118574793|sp|Q28EM1.1|FOXJ2_XENTR RecName: Full=Forkhead box protein J2; AltName: Full=XtFoxJ2;
           Short=FoxJ2
 gi|89271350|emb|CAJ83450.1| forkhead box J2 [Xenopus (Silurana) tropicalis]
          Length = 512

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCF KVPR +D PGKG +W +D
Sbjct: 105 NSIRHNLSLNKCFRKVPRPRDDPGKGSYWMID 136


>gi|417411793|gb|JAA52322.1| Putative forkhead/hnf-3-related transcription factor, partial
           [Desmodus rotundus]
          Length = 587

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 251 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRVDPASESKLVEQAFRKRRPR 300


>gi|167560887|ref|NP_001107970.1| forkhead box B1 [Xenopus (Silurana) tropicalis]
 gi|166796519|gb|AAI59041.1| foxb1 protein [Xenopus (Silurana) tropicalis]
          Length = 322

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 31/50 (62%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR 51
           NS+RHNLS N CF+K+PR  DQPGKG FW L      + E G   R  +R
Sbjct: 59  NSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPSCGDMFENGSFLRRRKR 108


>gi|157278127|ref|NP_001098162.1| hepatocyte nuclear factor 3-beta [Oryzias latipes]
 gi|21263704|sp|O42097.1|FOXA2_ORYLA RecName: Full=Hepatocyte nuclear factor 3-beta; Short=HNF-3-beta;
           Short=HNF-3B; AltName: Full=Forkhead box protein A2;
           AltName: Full=Me-HNF3B
 gi|2627211|dbj|BAA23579.1| Me-HNF3B [Oryzias latipes]
          Length = 415

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 33/50 (66%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR 51
           NSIRH+LS N CF+KVPRS D+PGKG FW L  D   + E G   R  +R
Sbjct: 196 NSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKR 245


>gi|426371535|ref|XP_004052700.1| PREDICTED: forkhead box protein J2 [Gorilla gorilla gorilla]
          Length = 541

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCF KVPR +D PGKG +W +D
Sbjct: 81  NSIRHNLSLNKCFRKVPRPRDDPGKGSYWTID 112


>gi|148234012|ref|NP_001080937.1| winged helix transcription factor XFD-11 [Xenopus laevis]
 gi|4092785|gb|AAC99469.1| winged helix transcription factor XFD-11 [Xenopus laevis]
          Length = 492

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLN+CFVKVPR   +PGKG +W LD
Sbjct: 125 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLD 156


>gi|354459055|ref|NP_001121266.2| forkhead box protein J2 [Xenopus laevis]
          Length = 512

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCF KVPR +D PGKG +W +D
Sbjct: 105 NSIRHNLSLNKCFRKVPRPRDDPGKGSYWMID 136


>gi|426362072|ref|XP_004048206.1| PREDICTED: forkhead box protein B2 [Gorilla gorilla gorilla]
          Length = 432

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 32/50 (64%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR 51
           NS+RHNLS N CF+K+PR  DQPGKG FW L  D   + E G   R  +R
Sbjct: 59  NSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPDCGDMFENGSFLRRRKR 108


>gi|45361375|ref|NP_989265.1| forkhead box protein I1 [Xenopus (Silurana) tropicalis]
 gi|82186245|sp|Q6P2Z3.1|FOXI1_XENTR RecName: Full=Forkhead box protein I1; Short=FoxI1
 gi|39795838|gb|AAH64241.1| forkhead box I4, gene 2 [Xenopus (Silurana) tropicalis]
 gi|89267433|emb|CAJ81516.1| forkhead box I1 [Xenopus (Silurana) tropicalis]
          Length = 363

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 31/61 (50%), Positives = 39/61 (63%), Gaps = 3/61 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDIQHRKQ 61
           NSIRHNLSLN CF KVPR ++ PGKG +W LD   +K+ +  G +R  R+  SD    K 
Sbjct: 171 NSIRHNLSLNDCFKKVPRDENDPGKGNYWTLDPNCEKMFD-NGNFRRKRKPKSDANSAKI 229

Query: 62  A 62
           A
Sbjct: 230 A 230


>gi|359070184|ref|XP_002691400.2| PREDICTED: LOW QUALITY PROTEIN: forkhead box protein I3 [Bos
           taurus]
          Length = 422

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 29/52 (55%), Positives = 36/52 (69%), Gaps = 2/52 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKS 53
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ + G   R  +R+S
Sbjct: 192 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRRS 243


>gi|345792583|ref|XP_854369.2| PREDICTED: forkhead box protein I2 [Canis lupus familiaris]
          Length = 320

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 30/63 (47%), Positives = 39/63 (61%), Gaps = 3/63 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDIQHRKQ 61
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ +  G +R  R+K  ++     
Sbjct: 163 NSIRHNLSLNDCFKKVPREEDDPGKGNYWTLDPNCEKMFD-NGNFRRKRKKRGEVGAAGS 221

Query: 62  AHR 64
             R
Sbjct: 222 GAR 224


>gi|115502200|sp|Q6NVT7.2|FOXC2_XENTR RecName: Full=Forkhead box protein C2; Short=FoxC2
          Length = 464

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLN+CFVKVPR   +PGKG +W LD
Sbjct: 118 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLD 149


>gi|440891442|gb|ELR45124.1| Forkhead box protein I3, partial [Bos grunniens mutus]
          Length = 294

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 29/52 (55%), Positives = 36/52 (69%), Gaps = 2/52 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKS 53
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ + G   R  +R+S
Sbjct: 64  NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRRS 115


>gi|47497986|ref|NP_998857.1| forkhead box protein C2 [Xenopus (Silurana) tropicalis]
 gi|45709775|gb|AAH67916.1| forkhead box C2 (MFH-1, mesenchyme forkhead 1) [Xenopus (Silurana)
           tropicalis]
 gi|89269875|emb|CAJ83766.1| forkhead box C2 (MFH-1, mesenchyme forkhead 1) [Xenopus (Silurana)
           tropicalis]
          Length = 463

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLN+CFVKVPR   +PGKG +W LD
Sbjct: 117 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLD 148


>gi|307192426|gb|EFN75642.1| Fork head domain-containing protein crocodile [Harpegnathos
           saltator]
          Length = 435

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLN+CFVKVPR   +PGKG +W LD
Sbjct: 116 NSIRHNLSLNECFVKVPRDDKKPGKGSYWSLD 147


>gi|297460002|ref|XP_002700845.1| PREDICTED: forkhead box protein I3, partial [Bos taurus]
          Length = 307

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 29/52 (55%), Positives = 36/52 (69%), Gaps = 2/52 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKS 53
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ + G   R  +R+S
Sbjct: 77  NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRRS 128


>gi|195020452|ref|XP_001985198.1| GH14639 [Drosophila grimshawi]
 gi|193898680|gb|EDV97546.1| GH14639 [Drosophila grimshawi]
          Length = 733

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 30/66 (45%), Positives = 39/66 (59%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEGGGRYRNVRRKSSDIQHRKQAH 63
           NSIRHNLSLN+ F+KV RS+D+PGKG FW++D     +        RR+ S    R    
Sbjct: 488 NSIRHNLSLNRYFIKVARSQDEPGKGSFWRIDPDSGAKLIDHSYKKRRQRSSQGFRPPYG 547

Query: 64  RPKPAP 69
            P+ AP
Sbjct: 548 MPRSAP 553


>gi|395538557|ref|XP_003771244.1| PREDICTED: forkhead box protein J2 [Sarcophilus harrisii]
          Length = 525

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCF KVPR +D PGKG +W +D
Sbjct: 112 NSIRHNLSLNKCFRKVPRPRDDPGKGSYWTID 143


>gi|380805393|gb|AFE74572.1| forkhead box protein K1, partial [Macaca mulatta]
          Length = 338

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 35/50 (70%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDL---QKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++      KL E   R R  R
Sbjct: 177 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIAPASEAKLVEQAFRKRRQR 226


>gi|321454577|gb|EFX65742.1| hypothetical protein DAPPUDRAFT_332896 [Daphnia pulex]
          Length = 545

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 300 NSIRHNLSLNRYFLKVPRSQEEPGKGSFWRIDPTSESKLVEQAFRRRRQR 349


>gi|312375901|gb|EFR23152.1| hypothetical protein AND_13431 [Anopheles darlingi]
          Length = 506

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 32/50 (64%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLE--EGGGRYRNVRR 51
           NS+RHNLS N CF+KVPR  D+PGKG +W L  Q  +  E G   R  +R
Sbjct: 104 NSLRHNLSFNDCFIKVPRRPDRPGKGAYWALHPQAFDMFENGSLLRRRKR 153


>gi|297684627|ref|XP_002819929.1| PREDICTED: forkhead box protein B2 [Pongo abelii]
          Length = 430

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 32/50 (64%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR 51
           NS+RHNLS N CF+K+PR  DQPGKG FW L  D   + E G   R  +R
Sbjct: 59  NSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPDCGDMFENGSFLRRRKR 108


>gi|281348526|gb|EFB24110.1| hypothetical protein PANDA_018231 [Ailuropoda melanoleuca]
          Length = 370

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 31/71 (43%), Positives = 38/71 (53%), Gaps = 6/71 (8%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEGG----GRYRNVRRKSSDIQHR 59
           NSIRHNL+LN CFVKVPR    PGKG +W   L  L  GG    G  +  RR +  +  +
Sbjct: 47  NSIRHNLTLNDCFVKVPREPGNPGKGNYW--TLXSLPRGGELWFGVLKERRRPAIPVSMK 104

Query: 60  KQAHRPKPAPS 70
                P P P+
Sbjct: 105 PPFLHPNPCPA 115


>gi|148702888|gb|EDL34835.1| mCG12375, isoform CRA_a [Mus musculus]
          Length = 557

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 23/32 (71%), Positives = 30/32 (93%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D
Sbjct: 204 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRID 235


>gi|3283040|gb|AAC25103.1| forkhead-5 [Danio rerio]
 gi|51593394|gb|AAH78426.1| Foxb1.1 protein [Danio rerio]
          Length = 296

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 31/50 (62%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR 51
           NS+RHNLS N CF+K+PR  DQPGKG FW L      + E G   R  +R
Sbjct: 59  NSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPSCGDMFENGSFLRRRKR 108


>gi|74419010|gb|ABA03230.1| forkhead domain protein C [Nematostella vectensis]
          Length = 456

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 37/90 (41%), Positives = 49/90 (54%), Gaps = 5/90 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVRRKSSDIQH-- 58
           NSIRHNLSLN+CFVKVPR   +PGKG FW LD   L   E G    R  R +  D+Q   
Sbjct: 125 NSIRHNLSLNECFVKVPRDDKKPGKGSFWMLDPDSLNMFENGSYLRRRKRFRKKDVQKSM 184

Query: 59  RKQAHRPKPAPSENLNTAYTNNNSIAPGEN 88
             ++ R     S   +TA +  ++ +  +N
Sbjct: 185 EGESQRKSDGTSVENSTARSETSTTSAEQN 214


>gi|213626620|gb|AAI69733.1| Winged helix transcription factor XFD-11 [Xenopus laevis]
          Length = 492

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLN+CFVKVPR   +PGKG +W LD
Sbjct: 125 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLD 156


>gi|194669378|ref|XP_870057.3| PREDICTED: uncharacterized protein LOC613814 [Bos taurus]
          Length = 407

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 32/50 (64%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR 51
           NS+RHNLS N CF+K+PR  DQPGKG FW L  D   + E G   R  +R
Sbjct: 59  NSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPDCGDMFENGSFLRRRKR 108


>gi|195128667|ref|XP_002008783.1| GI11623 [Drosophila mojavensis]
 gi|193920392|gb|EDW19259.1| GI11623 [Drosophila mojavensis]
          Length = 734

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 30/66 (45%), Positives = 39/66 (59%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEGGGRYRNVRRKSSDIQHRKQAH 63
           NSIRHNLSLN+ F+KV RS+D+PGKG FW++D     +        RR+ S    R    
Sbjct: 482 NSIRHNLSLNRYFIKVARSQDEPGKGSFWRIDPDSGAKLIDHSYKKRRQRSSQGFRPPYG 541

Query: 64  RPKPAP 69
            P+ AP
Sbjct: 542 MPRSAP 547


>gi|190576657|gb|ACE79136.1| winged helix/forkhead transcription factor FoxAa [Branchiostoma
           floridae]
          Length = 407

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 14/89 (15%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR-----KSSDI 56
           NSIRH+LS N CFVKVPR+ D+PGKG +W L  +   + E G   R  +R     K +  
Sbjct: 157 NSIRHSLSFNDCFVKVPRTPDRPGKGSYWTLHPEAGNMFENGCYLRRQKRFKCEKKLAMK 216

Query: 57  QHRKQAHRPKPAPSENLNTAYTNNNSIAP 85
             ++QA R  P P        T N++++P
Sbjct: 217 MAQQQAARDTPNPG-------TENSAVSP 238


>gi|115528269|gb|AAI24873.1| LOC100158348 protein [Xenopus laevis]
          Length = 489

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCF KVPR +D PGKG +W +D
Sbjct: 82  NSIRHNLSLNKCFRKVPRPRDDPGKGSYWMID 113


>gi|157057168|ref|NP_032268.2| forkhead box protein D1 [Mus musculus]
 gi|341940705|sp|Q61345.2|FOXD1_MOUSE RecName: Full=Forkhead box protein D1; AltName: Full=Brain factor
           2; Short=BF-2; AltName: Full=Forkhead-related protein
           FKHL8; AltName: Full=Forkhead-related transcription
           factor 4; Short=FREAC-4; AltName: Full=HFH-BF-2
 gi|74205730|dbj|BAE21140.1| unnamed protein product [Mus musculus]
 gi|74206403|dbj|BAE24920.1| unnamed protein product [Mus musculus]
          Length = 456

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 23/32 (71%), Positives = 25/32 (78%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLN CFVK+PR    PGKG +W LD
Sbjct: 176 NSIRHNLSLNDCFVKIPREPGNPGKGNYWTLD 207


>gi|392345282|ref|XP_001057782.2| PREDICTED: forkhead box protein D1 [Rattus norvegicus]
          Length = 455

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 23/32 (71%), Positives = 25/32 (78%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLN CFVK+PR    PGKG +W LD
Sbjct: 176 NSIRHNLSLNDCFVKIPREPGNPGKGNYWTLD 207


>gi|326930693|ref|XP_003211477.1| PREDICTED: forkhead box protein K2-like [Meleagris gallopavo]
          Length = 569

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 213 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPR 262


>gi|114625277|ref|XP_528330.2| PREDICTED: forkhead box protein B2 [Pan troglodytes]
          Length = 432

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 32/50 (64%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR 51
           NS+RHNLS N CF+K+PR  DQPGKG FW L  D   + E G   R  +R
Sbjct: 59  NSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPDCGDMFENGSFLRRRKR 108


>gi|13924465|gb|AAK49016.1|AF155133_1 FOXJ2 forkhead factor isoform FOXJ2.S [Homo sapiens]
 gi|119609049|gb|EAW88643.1| forkhead box J2, isoform CRA_b [Homo sapiens]
          Length = 526

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCF KVPR +D PGKG +W +D
Sbjct: 112 NSIRHNLSLNKCFRKVPRPRDDPGKGSYWTID 143


>gi|148227860|ref|NP_001081683.1| forkhead box protein C1-A [Xenopus laevis]
 gi|82248251|sp|Q9PVZ3.1|FXC1A_XENLA RecName: Full=Forkhead box protein C1-A; Short=FoxC1; AltName:
           Full=Fork head domain-related protein 11; Short=XFD-11
 gi|5042343|emb|CAB44727.1| XFD-11 protein [Xenopus laevis]
 gi|213626829|gb|AAI70201.1| Winged helix transcription factor XFD-11 [Xenopus laevis]
          Length = 492

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLN+CFVKVPR   +PGKG +W LD
Sbjct: 125 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLD 156


>gi|603460|gb|AAC42042.1| transcription factor [Mus musculus]
          Length = 456

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 23/32 (71%), Positives = 25/32 (78%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLN CFVK+PR    PGKG +W LD
Sbjct: 176 NSIRHNLSLNDCFVKIPREPGNPGKGNYWTLD 207


>gi|449492502|ref|XP_002197626.2| PREDICTED: uncharacterized protein LOC100230552 [Taeniopygia
           guttata]
          Length = 493

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLN+CFVKVPR   +PGKG +W LD
Sbjct: 123 NSIRHNLSLNECFVKVPRDDKKPGKGNYWTLD 154


>gi|347967916|ref|XP_003436136.1| AGAP013297-PA [Anopheles gambiae str. PEST]
 gi|333468245|gb|EGK96877.1| AGAP013297-PA [Anopheles gambiae str. PEST]
          Length = 436

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 32/50 (64%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLE--EGGGRYRNVRR 51
           NS+RHNLS N CF+KVPR  D+PGKG +W L  Q  +  E G   R  +R
Sbjct: 59  NSLRHNLSFNDCFIKVPRRPDRPGKGAYWALHPQAFDMFENGSLLRRRKR 108


>gi|224090863|ref|XP_002187175.1| PREDICTED: forkhead box protein B2 [Taeniopygia guttata]
          Length = 159

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 34/75 (45%), Positives = 41/75 (54%), Gaps = 5/75 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRRKSSDIQHRKQ 61
           NS+RHNLS N CF+K+PR  DQPGKG FW L  D   + E G   R  RRK   +  R +
Sbjct: 59  NSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPDCGDMFENGSFLR--RRKRFKVL-RPE 115

Query: 62  AHRPKPAPSENLNTA 76
            H P       +N A
Sbjct: 116 HHLPGGGGGGGVNHA 130


>gi|213623772|gb|AAI70199.1| Winged helix transcription factor XFD-11 [Xenopus laevis]
          Length = 492

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLN+CFVKVPR   +PGKG +W LD
Sbjct: 125 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLD 156


>gi|195144688|ref|XP_002013328.1| GL23472 [Drosophila persimilis]
 gi|194102271|gb|EDW24314.1| GL23472 [Drosophila persimilis]
          Length = 586

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 33/50 (66%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR 51
           NSIRH+LS N CFVK+PR+ D+PGKG FW L  D   + E G   R  +R
Sbjct: 227 NSIRHSLSFNDCFVKIPRTPDKPGKGSFWTLHPDSGNMFENGCYLRRQKR 276


>gi|156388873|ref|XP_001634717.1| predicted protein [Nematostella vectensis]
 gi|156221803|gb|EDO42654.1| predicted protein [Nematostella vectensis]
          Length = 98

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4  NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
          NSIRHNLSLNKCFVK+PR +  PGKG +W LD
Sbjct: 49 NSIRHNLSLNKCFVKIPRERSDPGKGCYWALD 80


>gi|49257792|gb|AAH74713.1| forkhead box J2 [Xenopus (Silurana) tropicalis]
          Length = 489

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCF KVPR +D PGKG +W +D
Sbjct: 82  NSIRHNLSLNKCFRKVPRPRDDPGKGSYWMID 113


>gi|189235432|ref|XP_001812698.1| PREDICTED: similar to forkhead protein/ forkhead protein domain
           [Tribolium castaneum]
 gi|270003561|gb|EFA00009.1| hypothetical protein TcasGA2_TC002813 [Tribolium castaneum]
          Length = 342

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLN+CFVKVPR   +PGKG +W LD
Sbjct: 107 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLD 138


>gi|449501478|ref|XP_004176872.1| PREDICTED: LOW QUALITY PROTEIN: forkhead box protein I1c-like
           [Taeniopygia guttata]
          Length = 399

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 29/52 (55%), Positives = 36/52 (69%), Gaps = 2/52 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKS 53
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ + G   R  +R+S
Sbjct: 181 NSIRHNLSLNDCFRKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRRS 232


>gi|405963969|gb|EKC29500.1| Hepatocyte nuclear factor 3-beta [Crassostrea gigas]
          Length = 401

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 33/50 (66%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR 51
           NSIRH+LS N CFVKVPR+ D+PGKG +W L  D   + E G   R  +R
Sbjct: 183 NSIRHSLSFNDCFVKVPRTPDRPGKGSYWTLHPDSGNMFENGCYLRRQKR 232


>gi|18858693|ref|NP_571358.1| forkhead box B1.1 [Danio rerio]
 gi|2982347|gb|AAC06365.1| fork head domain protein FKD5 [Danio rerio]
          Length = 299

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 31/50 (62%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR 51
           NS+RHNLS N CF+K+PR  DQPGKG FW L      + E G   R  +R
Sbjct: 59  NSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPSCGDMFENGSFLRRRKR 108


>gi|426226364|ref|XP_004007314.1| PREDICTED: forkhead box protein I3 [Ovis aries]
          Length = 364

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/85 (44%), Positives = 48/85 (56%), Gaps = 13/85 (15%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDIQHRKQ 61
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ + G    N RRK      RK+
Sbjct: 134 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNG----NFRRK------RKR 183

Query: 62  AHRPKPAPSENLNTAYTNNNSIAPG 86
                  PS  + T+ +    I+PG
Sbjct: 184 RSEASSTPSVAVGTSKSEEG-ISPG 207


>gi|354502467|ref|XP_003513307.1| PREDICTED: forkhead box protein B2-like [Cricetulus griseus]
          Length = 191

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 24/43 (55%), Positives = 27/43 (62%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEGGGRY 46
           NS+RHNLS N CF+K+PR  DQPGKG FW L        G  Y
Sbjct: 59  NSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPSSGVPVGPEY 101


>gi|74096473|ref|NP_001027695.1| FoxB protein [Ciona intestinalis]
 gi|40642809|emb|CAD58964.1| FoxB protein [Ciona intestinalis]
          Length = 475

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 30/59 (50%), Positives = 34/59 (57%), Gaps = 3/59 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDL---QKLEEGGGRYRNVRRKSSDIQHR 59
           NS+RHNLS N CFVKVPR  DQPGKG  W L     +  E G    R  R K++  Q R
Sbjct: 59  NSLRHNLSFNDCFVKVPRRGDQPGKGSLWSLHPTCGEMFENGSFLRRRKRFKTNSPQRR 117


>gi|403289070|ref|XP_003935691.1| PREDICTED: forkhead box protein D4 [Saimiri boliviensis
           boliviensis]
          Length = 448

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 31/68 (45%), Positives = 37/68 (54%), Gaps = 2/68 (2%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDIQHRKQ 61
           NSIRHNLSLN CFVK+PR    PGKG +W LD   Q + + G   R  +R        + 
Sbjct: 153 NSIRHNLSLNDCFVKIPREPGHPGKGNYWSLDPASQDMFDNGSFLRRRKRFKRHQPTSRA 212

Query: 62  AHRPKPAP 69
            H P P P
Sbjct: 213 HHLPHPFP 220


>gi|355563405|gb|EHH19967.1| Hepatocyte nuclear factor 3-beta [Macaca mulatta]
          Length = 427

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 29/56 (51%), Positives = 35/56 (62%), Gaps = 2/56 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRRKSSDIQ 57
           NSIRH+LS N CF+KVPRS D+PGKG FW L  D   + E G   R  +R   + Q
Sbjct: 175 NSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCEKQ 230


>gi|240955404|ref|XP_002399810.1| forkhead domain-containing protein, putative [Ixodes scapularis]
 gi|215490638|gb|EEC00281.1| forkhead domain-containing protein, putative [Ixodes scapularis]
          Length = 231

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 25/32 (78%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLN+CFVKVPR   +PGKG FW LD
Sbjct: 167 NSIRHNLSLNECFVKVPRDDKKPGKGSFWTLD 198


>gi|405949951|gb|EKC17961.1| Forkhead box protein L1 [Crassostrea gigas]
          Length = 385

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 31/54 (57%), Positives = 34/54 (62%), Gaps = 3/54 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDL---QKLEEGGGRYRNVRRKSS 54
           NSIRHNLSLN CFVKV R K +PGKG +W LD    +  E G  R R  R K S
Sbjct: 116 NSIRHNLSLNDCFVKVAREKGKPGKGNYWTLDPNCEEMFENGNYRRRKRRVKGS 169


>gi|353233248|emb|CCD80603.1| putative forkhead protein/ forkhead protein domain [Schistosoma
           mansoni]
          Length = 787

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 23/32 (71%), Positives = 29/32 (90%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLN+ F++VPRS+ +PGKG FW+LD
Sbjct: 476 NSIRHNLSLNRYFIRVPRSQSEPGKGAFWQLD 507


>gi|303391503|ref|XP_003073981.1| Forkhead/HNF3 transcription factor [Encephalitozoon intestinalis
           ATCC 50506]
 gi|303303130|gb|ADM12621.1| Forkhead/HNF3 transcription factor [Encephalitozoon intestinalis
           ATCC 50506]
          Length = 254

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 1/60 (1%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKL-EEGGGRYRNVRRKSSDIQHRKQA 62
           NSIRHNLSLNKCF KVPR     GKGG W LD + L +E   R R VR+ S+ I  R ++
Sbjct: 156 NSIRHNLSLNKCFKKVPRDPGTRGKGGKWMLDHEFLSKEEFKRRRRVRQYSTKILDRSES 215


>gi|156363335|ref|XP_001626000.1| predicted protein [Nematostella vectensis]
 gi|156212860|gb|EDO33900.1| predicted protein [Nematostella vectensis]
          Length = 456

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 37/90 (41%), Positives = 49/90 (54%), Gaps = 5/90 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVRRKSSDIQH-- 58
           NSIRHNLSLN+CFVKVPR   +PGKG FW LD   L   E G    R  R +  D+Q   
Sbjct: 125 NSIRHNLSLNECFVKVPRDDKKPGKGSFWMLDPDSLNMFENGSYLRRRKRFRKKDVQKSM 184

Query: 59  RKQAHRPKPAPSENLNTAYTNNNSIAPGEN 88
             ++ R     S   +TA +  ++ +  +N
Sbjct: 185 EGESQRKSDGTSVENSTARSETSTTSAEQN 214


>gi|109111830|ref|XP_001100107.1| PREDICTED: forkhead box protein B2 [Macaca mulatta]
          Length = 431

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 32/50 (64%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR 51
           NS+RHNLS N CF+K+PR  DQPGKG FW L  D   + E G   R  +R
Sbjct: 59  NSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPDCGDMFENGSFLRRRKR 108


>gi|403303979|ref|XP_003942591.1| PREDICTED: forkhead box protein I3 [Saimiri boliviensis
           boliviensis]
          Length = 544

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 29/52 (55%), Positives = 36/52 (69%), Gaps = 2/52 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKS 53
           NSIRHNLSLN CF KVPR +D PGKG +W LD   +K+ + G   R  +R+S
Sbjct: 316 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRRS 367


>gi|256075258|ref|XP_002573937.1| forkhead protein/ forkhead protein domain [Schistosoma mansoni]
          Length = 787

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 23/32 (71%), Positives = 29/32 (90%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLN+ F++VPRS+ +PGKG FW+LD
Sbjct: 476 NSIRHNLSLNRYFIRVPRSQSEPGKGAFWQLD 507


>gi|148702889|gb|EDL34836.1| mCG12375, isoform CRA_b [Mus musculus]
          Length = 450

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 164 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLVEQAFRKRRPR 213


>gi|148227814|ref|NP_001089846.1| forkhead box protein C1-B [Xenopus laevis]
 gi|123913511|sp|Q32NP8.1|FXC1B_XENLA RecName: Full=Forkhead box protein C1-B
 gi|80478512|gb|AAI08536.1| MGC130988 protein [Xenopus laevis]
          Length = 495

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLN+CFVKVPR   +PGKG +W LD
Sbjct: 125 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLD 156


>gi|74185584|dbj|BAE32686.1| unnamed protein product [Mus musculus]
          Length = 150

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCF KVPR +D PGKG +W +D
Sbjct: 112 NSIRHNLSLNKCFRKVPRPRDDPGKGSYWTID 143


>gi|47220394|emb|CAF98493.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 470

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLN+CFVKVPR   +PGKG +W LD
Sbjct: 120 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLD 151


>gi|56118522|ref|NP_001007864.1| forkhead box protein C1 [Xenopus (Silurana) tropicalis]
 gi|82181819|sp|Q68F77.1|FOXC1_XENTR RecName: Full=Forkhead box protein C1
 gi|51258216|gb|AAH79966.1| forkhead box C1 [Xenopus (Silurana) tropicalis]
          Length = 495

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLN+CFVKVPR   +PGKG +W LD
Sbjct: 125 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLD 156


>gi|351708793|gb|EHB11712.1| Forkhead box protein S1 [Heterocephalus glaber]
          Length = 533

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLN+CFVKVPR   +PGKG +W LD
Sbjct: 239 NSIRHNLSLNECFVKVPRDDRKPGKGSYWTLD 270


>gi|281354097|gb|EFB29681.1| hypothetical protein PANDA_013447 [Ailuropoda melanoleuca]
          Length = 438

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 29/56 (51%), Positives = 35/56 (62%), Gaps = 2/56 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRRKSSDIQ 57
           NSIRH+LS N CF+KVPRS D+PGKG FW L  D   + E G   R  +R   + Q
Sbjct: 184 NSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCEKQ 239


>gi|238053999|ref|NP_001153920.1| forkhead box A [Oryzias latipes]
 gi|226441703|gb|ACO57454.1| forkhead box A [Oryzias latipes]
          Length = 333

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 33/50 (66%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR 51
           NSIRH+LS N CF+KVPRS D+PGKG FW L  D   + E G   R  +R
Sbjct: 150 NSIRHSLSFNDCFIKVPRSSDKPGKGSFWALHPDSGNMFENGCYLRRQKR 199


>gi|195493344|ref|XP_002094376.1| GE20234 [Drosophila yakuba]
 gi|194180477|gb|EDW94088.1| GE20234 [Drosophila yakuba]
          Length = 730

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 30/66 (45%), Positives = 39/66 (59%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEGGGRYRNVRRKSSDIQHRKQAH 63
           NSIRHNLSLN+ F+KV RS+D+PGKG FW++D     +        RR+ S    R    
Sbjct: 489 NSIRHNLSLNRYFIKVARSQDEPGKGSFWRIDPDSGAKLIDHSYKKRRQRSSQGFRPPYG 548

Query: 64  RPKPAP 69
            P+ AP
Sbjct: 549 MPRSAP 554


>gi|45551653|gb|AAS68037.1| forkhead box protein K1 isoform alpha [Takifugu rubripes]
          Length = 558

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 30/50 (60%), Positives = 35/50 (70%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDL---QKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KV RS+D+PGKG FW+LD     KL E   R R  R
Sbjct: 333 NSIRHNLSLNRYFLKVARSQDEPGKGSFWRLDSASESKLVEQAFRKRRQR 382


>gi|348537066|ref|XP_003456016.1| PREDICTED: forkhead box protein K1-like [Oreochromis niloticus]
          Length = 672

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 30/50 (60%), Positives = 35/50 (70%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDL---QKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KV RS+D+PGKG FW+LD     KL E   R R  R
Sbjct: 337 NSIRHNLSLNRYFLKVARSQDEPGKGSFWRLDSASEAKLVEQAFRKRRQR 386


>gi|348555495|ref|XP_003463559.1| PREDICTED: forkhead box protein B1-like [Cavia porcellus]
          Length = 403

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 22/31 (70%), Positives = 25/31 (80%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL 34
           NS+RHNLS N CF+K+PR  DQPGKG FW L
Sbjct: 137 NSLRHNLSFNDCFIKIPRRPDQPGKGSFWAL 167


>gi|410895415|ref|XP_003961195.1| PREDICTED: forkhead box protein I2-A-like [Takifugu rubripes]
          Length = 372

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 3/55 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDI 56
           NSIRHNLSLN CF KV R +D PGKG +W LD   +K+ +  G +R  R++ SDI
Sbjct: 177 NSIRHNLSLNDCFKKVARDEDDPGKGNYWTLDPNCEKMFD-NGNFRRKRKRRSDI 230


>gi|165979115|gb|ABY77003.1| FoxC1 [Scyliorhinus canicula]
          Length = 462

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLN+CFVKVPR   +PGKG +W LD
Sbjct: 117 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLD 148


>gi|61966923|ref|NP_001013757.1| forkhead box protein B2 [Homo sapiens]
 gi|74747718|sp|Q5VYV0.1|FOXB2_HUMAN RecName: Full=Forkhead box protein B2
          Length = 432

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 32/50 (64%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR 51
           NS+RHNLS N CF+K+PR  DQPGKG FW L  D   + E G   R  +R
Sbjct: 59  NSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPDCGDMFENGSFLRRRKR 108


>gi|47225833|emb|CAF98313.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 313

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 22/31 (70%), Positives = 25/31 (80%)

Query: 4  NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL 34
          NS+RHNLS N CF+K+PR  DQPGKG FW L
Sbjct: 59 NSLRHNLSFNDCFIKIPRRPDQPGKGSFWAL 89


>gi|410932185|ref|XP_003979474.1| PREDICTED: forkhead box C1-A-like, partial [Takifugu rubripes]
          Length = 273

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLN+CFVKVPR   +PGKG +W LD
Sbjct: 120 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLD 151


>gi|355689100|gb|AER98718.1| forkhead box J2 [Mustela putorius furo]
          Length = 361

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLNKCF KVPR +D PGKG +W +D
Sbjct: 90  NSIRHNLSLNKCFRKVPRPRDDPGKGSYWTID 121


>gi|148236087|ref|NP_001081836.1| forkhead box protein B1 [Xenopus laevis]
 gi|82228188|sp|O93529.1|FOXB1_XENLA RecName: Full=Forkhead box protein B1; Short=FoxB1; AltName:
          Full=Transcription factor FKH-5
 gi|3695057|gb|AAC62623.1| forkhead-domain-containing protein 5 [Xenopus laevis]
 gi|115528660|gb|AAI24884.1| Fkh-5 protein [Xenopus laevis]
          Length = 319

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 22/31 (70%), Positives = 25/31 (80%)

Query: 4  NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL 34
          NS+RHNLS N CF+K+PR  DQPGKG FW L
Sbjct: 59 NSLRHNLSFNDCFIKIPRRPDQPGKGSFWAL 89


>gi|149041174|gb|EDL95107.1| rCG27541, isoform CRA_b [Rattus norvegicus]
 gi|149041175|gb|EDL95108.1| rCG27541, isoform CRA_b [Rattus norvegicus]
          Length = 429

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 29/56 (51%), Positives = 35/56 (62%), Gaps = 2/56 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRRKSSDIQ 57
           NSIRH+LS N CF+KVPRS D+PGKG FW L  D   + E G   R  +R   + Q
Sbjct: 175 NSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCEKQ 230


>gi|410908018|ref|XP_003967488.1| PREDICTED: forkhead box protein B1-like [Takifugu rubripes]
 gi|410908020|ref|XP_003967489.1| PREDICTED: forkhead box protein B1-like [Takifugu rubripes]
          Length = 313

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 22/31 (70%), Positives = 25/31 (80%)

Query: 4  NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL 34
          NS+RHNLS N CF+K+PR  DQPGKG FW L
Sbjct: 59 NSLRHNLSFNDCFIKIPRRPDQPGKGSFWAL 89


>gi|348537891|ref|XP_003456426.1| PREDICTED: hepatocyte nuclear factor 3-beta-like [Oreochromis
           niloticus]
          Length = 466

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 31/62 (50%), Positives = 35/62 (56%), Gaps = 3/62 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQK---LEEGGGRYRNVRRKSSDIQHRK 60
           NSIRH+LS N CFVKV RS D+PGKG +W L  Q     E G    R  R K  D   +K
Sbjct: 200 NSIRHSLSFNDCFVKVARSPDKPGKGSYWTLHPQSGNMFENGCYLRRQKRFKIEDKSAKK 259

Query: 61  QA 62
            A
Sbjct: 260 AA 261


>gi|440899106|gb|ELR50471.1| Forkhead box protein B1 [Bos grunniens mutus]
          Length = 325

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 22/31 (70%), Positives = 25/31 (80%)

Query: 4  NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL 34
          NS+RHNLS N CF+K+PR  DQPGKG FW L
Sbjct: 59 NSLRHNLSFNDCFIKIPRRPDQPGKGSFWAL 89


>gi|18858701|ref|NP_571804.1| forkhead box C1-B [Danio rerio]
 gi|82247018|sp|Q9DE24.1|FXC1B_DANRE RecName: Full=Forkhead box C1-B
 gi|12004940|gb|AAG44242.1|AF219950_1 forkhead transcription factor c1.2 [Danio rerio]
 gi|28279751|gb|AAH46028.1| Forkhead box C1b [Danio rerio]
          Length = 433

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLN+CFVKVPR   +PGKG +W LD
Sbjct: 120 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLD 151


>gi|397515447|ref|XP_003827963.1| PREDICTED: forkhead box protein B1 [Pan paniscus]
          Length = 325

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 22/31 (70%), Positives = 25/31 (80%)

Query: 4  NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL 34
          NS+RHNLS N CF+K+PR  DQPGKG FW L
Sbjct: 59 NSLRHNLSFNDCFIKIPRRPDQPGKGSFWAL 89


>gi|334321523|ref|XP_003340123.1| PREDICTED: hypothetical protein LOC100619340 [Monodelphis
           domestica]
          Length = 525

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 23/32 (71%), Positives = 25/32 (78%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLN CFVK+PR    PGKG +W LD
Sbjct: 172 NSIRHNLSLNDCFVKIPREPGNPGKGNYWTLD 203


>gi|301775813|ref|XP_002923327.1| PREDICTED: forkhead box protein B1-like [Ailuropoda melanoleuca]
 gi|345795016|ref|XP_003433969.1| PREDICTED: forkhead box protein B1 [Canis lupus familiaris]
 gi|410961132|ref|XP_003987139.1| PREDICTED: forkhead box protein B1 [Felis catus]
 gi|281342319|gb|EFB17903.1| hypothetical protein PANDA_012450 [Ailuropoda melanoleuca]
          Length = 325

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 22/31 (70%), Positives = 25/31 (80%)

Query: 4  NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL 34
          NS+RHNLS N CF+K+PR  DQPGKG FW L
Sbjct: 59 NSLRHNLSFNDCFIKIPRRPDQPGKGSFWAL 89


>gi|1842097|gb|AAB47564.1| transcription factor hfkh-5 [Homo sapiens]
          Length = 165

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 31/50 (62%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR 51
           NS+RHNLS N CF+K+PR  DQPGKG FW L      + E G   R  +R
Sbjct: 52  NSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPSCGDMFENGSFLRRCKR 101


>gi|410933080|ref|XP_003979920.1| PREDICTED: forkhead box C1-A-like, partial [Takifugu rubripes]
          Length = 307

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLN+CFVKVPR   +PGKG +W LD
Sbjct: 102 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLD 133


>gi|410917822|ref|XP_003972385.1| PREDICTED: LOW QUALITY PROTEIN: forkhead box protein K1 [Takifugu
           rubripes]
          Length = 700

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 30/50 (60%), Positives = 35/50 (70%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDL---QKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KV RS+D+PGKG FW+LD     KL E   R R  R
Sbjct: 338 NSIRHNLSLNRYFLKVARSQDEPGKGSFWRLDSASESKLVEQAFRKRRQR 387


>gi|363744533|ref|XP_003643073.1| PREDICTED: forkhead box protein B2-like [Gallus gallus]
          Length = 321

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 32/50 (64%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR 51
           NS+RHNLS N CF+K+PR  DQPGKG FW L  D   + E G   R  +R
Sbjct: 59  NSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPDCGDMFENGSFLRRRKR 108


>gi|358333885|dbj|GAA52346.1| forkhead box protein C2-B [Clonorchis sinensis]
          Length = 837

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 29/50 (58%), Positives = 33/50 (66%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR 51
           NSIRHNLSLN CFVKV R   +PGKG FWKL  D + + + G   R  RR
Sbjct: 323 NSIRHNLSLNDCFVKVARDDKKPGKGSFWKLHPDARGMFDNGSFLRRKRR 372


>gi|115533184|ref|NP_001041114.1| Protein PHA-4, isoform a [Caenorhabditis elegans]
 gi|74962132|sp|Q17381.1|PHA4_CAEEL RecName: Full=Defective pharyngeal development protein 4; AltName:
           Full=Ce-fkh-1; AltName: Full=Fork head-HNF-3 homolog
 gi|1256430|gb|AAA96319.1| fork head/HNF-3-like protein [Caenorhabditis elegans]
 gi|3876881|emb|CAB07378.1| Protein PHA-4, isoform a [Caenorhabditis elegans]
          Length = 506

 Score = 58.9 bits (141), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 32/74 (43%), Positives = 43/74 (58%), Gaps = 8/74 (10%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEGGGRYRNV----RRKSSDIQHR 59
           NSIRH+LS N CFVKV RS D+PGKG FW L     E  G  + N     R+K   ++ R
Sbjct: 282 NSIRHSLSFNDCFVKVARSPDKPGKGSFWTLH----EHCGNMFENGCYLRRQKRFKVKER 337

Query: 60  KQAHRPKPAPSENL 73
           + + + + A S+ L
Sbjct: 338 EPSRKKRNANSQQL 351


>gi|84105533|gb|AAI11545.1| Foxc2-a protein [Xenopus laevis]
          Length = 302

 Score = 58.9 bits (141), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLN+CFVKVPR   +PGKG +W LD
Sbjct: 117 NSIRHNLSLNECFVKVPRDDKKPGKGSYWSLD 148


>gi|73956861|ref|XP_860948.1| PREDICTED: forkhead box protein C2 isoform 4 [Canis lupus
           familiaris]
          Length = 505

 Score = 58.9 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLN+CFVKVPR   +PGKG +W LD
Sbjct: 118 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLD 149


>gi|61867578|ref|XP_585450.1| PREDICTED: forkhead box protein B1 [Bos taurus]
 gi|296213368|ref|XP_002753240.1| PREDICTED: forkhead box protein B1 [Callithrix jacchus]
 gi|297479637|ref|XP_002690896.1| PREDICTED: forkhead box protein B1 [Bos taurus]
 gi|296483253|tpg|DAA25368.1| TPA: forkhead box B1-like [Bos taurus]
          Length = 325

 Score = 58.9 bits (141), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 22/31 (70%), Positives = 25/31 (80%)

Query: 4  NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL 34
          NS+RHNLS N CF+K+PR  DQPGKG FW L
Sbjct: 59 NSLRHNLSFNDCFIKIPRRPDQPGKGSFWAL 89


>gi|159031988|ref|NP_071773.2| forkhead box protein B1 [Mus musculus]
 gi|21542341|sp|Q64732.2|FOXB1_MOUSE RecName: Full=Forkhead box protein B1; AltName:
          Full=Transcription factor FKH-5
 gi|2098744|gb|AAB57686.1| winged-helix protein [Mus musculus]
 gi|84993289|gb|AAI11909.1| Forkhead box B1 [Mus musculus]
 gi|148694227|gb|EDL26174.1| forkhead box B1 [Mus musculus]
          Length = 325

 Score = 58.9 bits (141), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 22/31 (70%), Positives = 25/31 (80%)

Query: 4  NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL 34
          NS+RHNLS N CF+K+PR  DQPGKG FW L
Sbjct: 59 NSLRHNLSFNDCFIKIPRRPDQPGKGSFWAL 89


>gi|395822264|ref|XP_003784441.1| PREDICTED: forkhead box protein B1-like [Otolemur garnettii]
          Length = 325

 Score = 58.9 bits (141), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 22/31 (70%), Positives = 25/31 (80%)

Query: 4  NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL 34
          NS+RHNLS N CF+K+PR  DQPGKG FW L
Sbjct: 59 NSLRHNLSFNDCFIKIPRRPDQPGKGSFWAL 89


>gi|334325250|ref|XP_003340627.1| PREDICTED: forkhead box protein D1-like [Monodelphis domestica]
          Length = 486

 Score = 58.9 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 23/32 (71%), Positives = 25/32 (78%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLN CFVK+PR    PGKG +W LD
Sbjct: 168 NSIRHNLSLNDCFVKIPREPGNPGKGNYWTLD 199


>gi|256082286|ref|XP_002577389.1| forkhead protein/ forkhead protein domain [Schistosoma mansoni]
 gi|350645491|emb|CCD59843.1| forkhead protein/ forkhead protein domain,putative [Schistosoma
           mansoni]
          Length = 1156

 Score = 58.9 bits (141), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 24/34 (70%), Positives = 28/34 (82%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQ 37
           NSIRHNLSLNK F K+PRS+D+PGKG +W L  Q
Sbjct: 107 NSIRHNLSLNKSFTKIPRSRDEPGKGSYWCLSNQ 140


>gi|46048827|ref|NP_990337.1| forkhead box protein C1 [Gallus gallus]
 gi|3341441|emb|CAA76851.1| winged-helix transcription factor [Gallus gallus]
          Length = 528

 Score = 58.9 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLN+CFVKVPR   +PGKG +W LD
Sbjct: 85  NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLD 116


>gi|355692761|gb|EHH27364.1| Transcription factor FKH-5 [Macaca mulatta]
          Length = 325

 Score = 58.5 bits (140), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 22/31 (70%), Positives = 25/31 (80%)

Query: 4  NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL 34
          NS+RHNLS N CF+K+PR  DQPGKG FW L
Sbjct: 59 NSLRHNLSFNDCFIKIPRRPDQPGKGSFWAL 89


>gi|297271031|ref|XP_002800177.1| PREDICTED: forkhead box protein D4-like 1-like isoform 1 [Macaca
           mulatta]
          Length = 444

 Score = 58.5 bits (140), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 35/78 (44%), Positives = 41/78 (52%), Gaps = 3/78 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDIQHRKQ 61
           NSIRHNLSLN CFVK+PR    PGKG +W LD   Q + + G   R  +R     Q    
Sbjct: 153 NSIRHNLSLNDCFVKIPREPGHPGKGNYWSLDPASQDMFDNGSFLRRRKRFKRH-QLTPG 211

Query: 62  AHRPKPAPSENLNTAYTN 79
           AH P P P    + A  N
Sbjct: 212 AHLPHPFPLPAAHAALHN 229


>gi|348500468|ref|XP_003437795.1| PREDICTED: forkhead box protein B1-like [Oreochromis niloticus]
          Length = 307

 Score = 58.5 bits (140), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 28/57 (49%), Positives = 32/57 (56%), Gaps = 3/57 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQ---KLEEGGGRYRNVRRKSSDIQ 57
           NS+RHNLS N CF+K+PR  DQPGKG FW L        E G    R  R K   +Q
Sbjct: 59  NSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPSCGDMFENGSFLRRRKRFKVGSMQ 115


>gi|105554437|ref|NP_036314.2| forkhead box protein B1 [Homo sapiens]
 gi|109081359|ref|XP_001100781.1| PREDICTED: forkhead box protein B1-like [Macaca mulatta]
 gi|114657381|ref|XP_529689.2| PREDICTED: forkhead box protein B1 [Pan troglodytes]
 gi|332235822|ref|XP_003267104.1| PREDICTED: forkhead box protein B1 [Nomascus leucogenys]
 gi|338717884|ref|XP_003363716.1| PREDICTED: forkhead box protein B1-like [Equus caballus]
 gi|354465258|ref|XP_003495097.1| PREDICTED: forkhead box protein B1-like [Cricetulus griseus]
 gi|402874456|ref|XP_003901053.1| PREDICTED: forkhead box protein B1 [Papio anubis]
 gi|215274160|sp|Q99853.3|FOXB1_HUMAN RecName: Full=Forkhead box protein B1; AltName:
          Full=Transcription factor FKH-5
 gi|109730609|gb|AAI13711.1| Forkhead box B1 [Homo sapiens]
 gi|119597987|gb|EAW77581.1| forkhead box B1 [Homo sapiens]
 gi|149028868|gb|EDL84209.1| rCG56656 [Rattus norvegicus]
 gi|158255324|dbj|BAF83633.1| unnamed protein product [Homo sapiens]
 gi|261861906|dbj|BAI47475.1| forkhead box B1 [synthetic construct]
 gi|344243806|gb|EGV99909.1| Forkhead box protein B1 [Cricetulus griseus]
 gi|431895949|gb|ELK05367.1| Forkhead box protein B1 [Pteropus alecto]
          Length = 325

 Score = 58.5 bits (140), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 22/31 (70%), Positives = 25/31 (80%)

Query: 4  NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL 34
          NS+RHNLS N CF+K+PR  DQPGKG FW L
Sbjct: 59 NSLRHNLSFNDCFIKIPRRPDQPGKGSFWAL 89


>gi|1280487|emb|CAA63336.1| transcription factor [Mus musculus]
          Length = 324

 Score = 58.5 bits (140), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 22/31 (70%), Positives = 25/31 (80%)

Query: 4  NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL 34
          NS+RHNLS N CF+K+PR  DQPGKG FW L
Sbjct: 59 NSLRHNLSFNDCFIKIPRRPDQPGKGSFWAL 89


>gi|326927489|ref|XP_003209925.1| PREDICTED: forkhead box protein C2-like [Meleagris gallopavo]
          Length = 261

 Score = 58.5 bits (140), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 32/64 (50%), Positives = 37/64 (57%), Gaps = 3/64 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVRRKSSDIQHRK 60
           NSIRHNLSLN+CFVKVPR   +PGKG +W LD       E G    R  R K  D+   K
Sbjct: 119 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVSKEK 178

Query: 61  QAHR 64
           +  R
Sbjct: 179 EEAR 182


>gi|402897561|ref|XP_003911821.1| PREDICTED: forkhead box protein D4-like 1-like [Papio anubis]
          Length = 445

 Score = 58.5 bits (140), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 35/78 (44%), Positives = 41/78 (52%), Gaps = 3/78 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDIQHRKQ 61
           NSIRHNLSLN CFVK+PR    PGKG +W LD   Q + + G   R  +R     Q    
Sbjct: 154 NSIRHNLSLNDCFVKIPREPGHPGKGNYWSLDPASQDMFDNGSFLRRRKRFKRH-QLTPG 212

Query: 62  AHRPKPAPSENLNTAYTN 79
           AH P P P    + A  N
Sbjct: 213 AHLPHPFPLPAAHAALHN 230


>gi|395736634|ref|XP_002816393.2| PREDICTED: uncharacterized protein LOC100443984 [Pongo abelii]
          Length = 662

 Score = 58.5 bits (140), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLN+CFVKVPR   +PGKG +W LD
Sbjct: 124 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLD 155


>gi|148700417|gb|EDL32364.1| mCG11671 [Mus musculus]
          Length = 325

 Score = 58.5 bits (140), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLN+CFVKVPR   +PGKG +W LD
Sbjct: 124 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLD 155


>gi|431906536|gb|ELK10658.1| Forkhead box protein I3 [Pteropus alecto]
          Length = 288

 Score = 58.5 bits (140), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 28/52 (53%), Positives = 36/52 (69%), Gaps = 2/52 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKS 53
           NSIRHNLSLN CF KVPR +D PG+G +W LD   +K+ + G   R  +R+S
Sbjct: 58  NSIRHNLSLNDCFKKVPRDEDDPGEGNYWTLDPNCEKMFDNGNFRRKRKRRS 109


>gi|426233198|ref|XP_004010604.1| PREDICTED: forkhead box protein B1 [Ovis aries]
          Length = 304

 Score = 58.5 bits (140), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 22/31 (70%), Positives = 25/31 (80%)

Query: 4  NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL 34
          NS+RHNLS N CF+K+PR  DQPGKG FW L
Sbjct: 59 NSLRHNLSFNDCFIKIPRRPDQPGKGSFWAL 89


>gi|403274561|ref|XP_003929043.1| PREDICTED: forkhead box protein B1 [Saimiri boliviensis
          boliviensis]
          Length = 325

 Score = 58.5 bits (140), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 22/31 (70%), Positives = 25/31 (80%)

Query: 4  NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL 34
          NS+RHNLS N CF+K+PR  DQPGKG FW L
Sbjct: 59 NSLRHNLSFNDCFIKIPRRPDQPGKGSFWAL 89


>gi|224062305|ref|XP_002195537.1| PREDICTED: forkhead box protein B1 [Taeniopygia guttata]
          Length = 320

 Score = 58.5 bits (140), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 22/31 (70%), Positives = 25/31 (80%)

Query: 4  NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL 34
          NS+RHNLS N CF+K+PR  DQPGKG FW L
Sbjct: 59 NSLRHNLSFNDCFIKIPRRPDQPGKGSFWAL 89


>gi|213403452|ref|XP_002172498.1| fork head transcription factor 1 [Schizosaccharomyces japonicus
           yFS275]
 gi|212000545|gb|EEB06205.1| fork head transcription factor 1 [Schizosaccharomyces japonicus
           yFS275]
          Length = 770

 Score = 58.5 bits (140), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 28/48 (58%), Positives = 35/48 (72%), Gaps = 2/48 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEGGGRYRNVRR 51
           NSIRHNLSLNK F++VPR +++PGKG FW LD   + +  G   NVRR
Sbjct: 354 NSIRHNLSLNKAFIRVPRQQNEPGKGSFWMLDPACIPQFEG--TNVRR 399


>gi|33589462|gb|AAQ22498.1| RE03865p [Drosophila melanogaster]
          Length = 426

 Score = 58.5 bits (140), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 33/50 (66%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR 51
           NSIRH+LS N CFVK+PR+ D+PGKG FW L  D   + E G   R  +R
Sbjct: 256 NSIRHSLSFNDCFVKIPRTPDKPGKGSFWTLHPDSGNMFENGCYLRRQKR 305


>gi|195028702|ref|XP_001987215.1| GH21797 [Drosophila grimshawi]
 gi|193903215|gb|EDW02082.1| GH21797 [Drosophila grimshawi]
          Length = 456

 Score = 58.5 bits (140), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 32/50 (64%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRR 51
           NSIRHNLSLN CF+KVPR    PGKG FW LD   + + + G   R  +R
Sbjct: 125 NSIRHNLSLNDCFIKVPREPGNPGKGNFWTLDPLAEDMFDNGSFLRRRKR 174


>gi|347966347|ref|XP_321425.4| AGAP001671-PA [Anopheles gambiae str. PEST]
 gi|333470101|gb|EAA01374.4| AGAP001671-PA [Anopheles gambiae str. PEST]
          Length = 479

 Score = 58.5 bits (140), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 31/73 (42%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRRKSSDIQHRKQ 61
           NSIRH+LS N CFVKVPR+ D+PGKG FW L  D   + E G   R  +R   + +   +
Sbjct: 210 NSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKDEKKEVLR 269

Query: 62  AHRPKPAPSENLN 74
           +    PA   +L+
Sbjct: 270 SLHKSPAHGGSLD 282


>gi|195134670|ref|XP_002011760.1| GI10909 [Drosophila mojavensis]
 gi|193906883|gb|EDW05750.1| GI10909 [Drosophila mojavensis]
          Length = 413

 Score = 58.5 bits (140), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 23/32 (71%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLN CFV+VPR+ D PG+G +W LD
Sbjct: 138 NSIRHNLSLNPCFVRVPRALDDPGRGHYWALD 169


>gi|124054385|gb|ABM89417.1| FOXJ2 [Pongo pygmaeus]
          Length = 75

 Score = 58.5 bits (140), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4  NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
          NSIRHNLSLNKCF KVPR +D PGKG +W +D
Sbjct: 1  NSIRHNLSLNKCFRKVPRPRDDPGKGSYWTID 32


>gi|344291274|ref|XP_003417361.1| PREDICTED: forkhead box protein K2-like [Loxodonta africana]
          Length = 822

 Score = 58.5 bits (140), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
           NSIRHNLSLN+ F+KVPRS+++PGKG FW++D     KL E   R R  R
Sbjct: 466 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPR 515


>gi|297696783|ref|XP_002825559.1| PREDICTED: forkhead box protein B1 [Pongo abelii]
          Length = 325

 Score = 58.5 bits (140), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 22/31 (70%), Positives = 25/31 (80%)

Query: 4  NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL 34
          NS+RHNLS N CF+K+PR  DQPGKG FW L
Sbjct: 59 NSLRHNLSFNDCFIKIPRRPDQPGKGSFWAL 89


>gi|194377072|dbj|BAG63097.1| unnamed protein product [Homo sapiens]
          Length = 343

 Score = 58.5 bits (140), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 29/56 (51%), Positives = 35/56 (62%), Gaps = 2/56 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRRKSSDIQ 57
           NSIRH+LS N CF+KVPRS D+PGKG FW L  D   + E G   R  +R   + Q
Sbjct: 91  NSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCEKQ 146


>gi|387625225|gb|AFJ94199.1| forkhead box A, partial [Alitta virens]
          Length = 244

 Score = 58.5 bits (140), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 23/31 (74%), Positives = 26/31 (83%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL 34
           NSIRH+LS N CFVKVPRS D+PGKG +W L
Sbjct: 209 NSIRHSLSFNDCFVKVPRSPDKPGKGSYWTL 239


>gi|47215280|emb|CAF98089.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 174

 Score = 58.5 bits (140), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLN+CFVKVPR   +PGKG +W LD
Sbjct: 118 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLD 149


>gi|195107136|ref|XP_001998172.1| GI23781 [Drosophila mojavensis]
 gi|193914766|gb|EDW13633.1| GI23781 [Drosophila mojavensis]
          Length = 391

 Score = 58.5 bits (140), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 32/50 (64%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLE--EGGGRYRNVRR 51
           NS+RHNLS N CF+KVPR  D+PGKG +W L  Q  +  E G   R  +R
Sbjct: 59  NSLRHNLSFNDCFIKVPRLPDRPGKGAYWALHPQAFDMFENGSLLRRRKR 108


>gi|281366038|ref|NP_648440.2| forkhead domain 68A, isoform G [Drosophila melanogaster]
 gi|281366040|ref|NP_729673.2| forkhead domain 68A, isoform H [Drosophila melanogaster]
 gi|281366042|ref|NP_729674.2| forkhead domain 68A, isoform I [Drosophila melanogaster]
 gi|281366044|ref|NP_729675.2| forkhead domain 68A, isoform J [Drosophila melanogaster]
 gi|68051287|gb|AAY84907.1| LD11294p [Drosophila melanogaster]
 gi|272455146|gb|AAN11900.2| forkhead domain 68A, isoform G [Drosophila melanogaster]
 gi|272455147|gb|AAF50093.3| forkhead domain 68A, isoform H [Drosophila melanogaster]
 gi|272455148|gb|AAN11901.2| forkhead domain 68A, isoform I [Drosophila melanogaster]
 gi|272455149|gb|AAF50094.3| forkhead domain 68A, isoform J [Drosophila melanogaster]
          Length = 746

 Score = 58.5 bits (140), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 23/32 (71%), Positives = 29/32 (90%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLN+ F+KV RS+D+PGKG FW++D
Sbjct: 500 NSIRHNLSLNRYFIKVARSQDEPGKGSFWRID 531


>gi|442631653|ref|NP_001261703.1| forkhead domain 68A, isoform P [Drosophila melanogaster]
 gi|440215624|gb|AGB94397.1| forkhead domain 68A, isoform P [Drosophila melanogaster]
          Length = 745

 Score = 58.5 bits (140), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 23/32 (71%), Positives = 29/32 (90%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLN+ F+KV RS+D+PGKG FW++D
Sbjct: 500 NSIRHNLSLNRYFIKVARSQDEPGKGSFWRID 531


>gi|442631651|ref|NP_001261702.1| forkhead domain 68A, isoform O [Drosophila melanogaster]
 gi|440215623|gb|AGB94396.1| forkhead domain 68A, isoform O [Drosophila melanogaster]
          Length = 745

 Score = 58.5 bits (140), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 23/32 (71%), Positives = 29/32 (90%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLN+ F+KV RS+D+PGKG FW++D
Sbjct: 499 NSIRHNLSLNRYFIKVARSQDEPGKGSFWRID 530


>gi|109732486|gb|AAI15977.1| Foxb2 protein [Mus musculus]
          Length = 205

 Score = 58.5 bits (140), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 31/62 (50%), Positives = 36/62 (58%), Gaps = 4/62 (6%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRRKSSDIQHRKQ 61
           NS+RHNLS N CF+K+PR  DQPGKG FW L  D   + E G   R  RRK   +     
Sbjct: 59  NSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPDCGDMFENGSFLR--RRKRFKVLRADH 116

Query: 62  AH 63
           AH
Sbjct: 117 AH 118


>gi|410912324|ref|XP_003969640.1| PREDICTED: forkhead box protein B1-like [Takifugu rubripes]
          Length = 310

 Score = 58.5 bits (140), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 28/57 (49%), Positives = 32/57 (56%), Gaps = 3/57 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQ---KLEEGGGRYRNVRRKSSDIQ 57
           NS+RHNLS N CF+K+PR  DQPGKG FW L        E G    R  R K   +Q
Sbjct: 59  NSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPSCGDMFENGSFLRRRKRFKVGGLQ 115


>gi|344252872|gb|EGW08976.1| Hepatocyte nuclear factor 3-beta [Cricetulus griseus]
          Length = 430

 Score = 58.5 bits (140), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 29/56 (51%), Positives = 35/56 (62%), Gaps = 2/56 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRRKSSDIQ 57
           NSIRH+LS N CF+KVPRS D+PGKG FW L  D   + E G   R  +R   + Q
Sbjct: 175 NSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCEKQ 230


>gi|63102195|gb|AAH95603.1| Forkhead box D3 [Danio rerio]
          Length = 371

 Score = 58.5 bits (140), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 24/34 (70%), Positives = 26/34 (76%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQ 37
           NSIRHNLSLN CFVK+PR    PGKG +W LD Q
Sbjct: 142 NSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPQ 175


>gi|311743|emb|CAA50744.1| fkh-4 [Mus musculus]
          Length = 111

 Score = 58.5 bits (140), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 32/50 (64%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR 51
           NS+RHNLS N CF+K+PR  DQPGKG FW L  D   + E G   R  +R
Sbjct: 56  NSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPDCGDMFENGSFLRRRKR 105


>gi|194868888|ref|XP_001972350.1| GG13935 [Drosophila erecta]
 gi|190654133|gb|EDV51376.1| GG13935 [Drosophila erecta]
          Length = 732

 Score = 58.5 bits (140), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 23/32 (71%), Positives = 29/32 (90%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLN+ F+KV RS+D+PGKG FW++D
Sbjct: 490 NSIRHNLSLNRYFIKVARSQDEPGKGSFWRID 521


>gi|148696582|gb|EDL28529.1| mCG10586, isoform CRA_a [Mus musculus]
          Length = 437

 Score = 58.5 bits (140), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 33/50 (66%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR 51
           NSIRH+LS N CF+KVPRS D+PGKG FW L  D   + E G   R  +R
Sbjct: 183 NSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKR 232


>gi|18858703|ref|NP_571365.1| forkhead box protein D3 [Danio rerio]
 gi|2982349|gb|AAC06366.1| fork head domain protein FKD6 [Danio rerio]
          Length = 371

 Score = 58.5 bits (140), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 24/34 (70%), Positives = 26/34 (76%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQ 37
           NSIRHNLSLN CFVK+PR    PGKG +W LD Q
Sbjct: 142 NSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPQ 175


>gi|24662518|ref|NP_729672.1| forkhead domain 68A, isoform K [Drosophila melanogaster]
 gi|10728000|gb|AAF50092.2| forkhead domain 68A, isoform K [Drosophila melanogaster]
 gi|60202497|gb|AAX14634.1| fork head transcription factor long isoform [Drosophila
           melanogaster]
          Length = 740

 Score = 58.5 bits (140), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 23/32 (71%), Positives = 29/32 (90%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLN+ F+KV RS+D+PGKG FW++D
Sbjct: 494 NSIRHNLSLNRYFIKVARSQDEPGKGSFWRID 525


>gi|395502579|ref|XP_003755656.1| PREDICTED: forkhead box protein B1 [Sarcophilus harrisii]
          Length = 323

 Score = 58.5 bits (140), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 22/31 (70%), Positives = 25/31 (80%)

Query: 4  NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL 34
          NS+RHNLS N CF+K+PR  DQPGKG FW L
Sbjct: 59 NSLRHNLSFNDCFIKIPRRPDQPGKGSFWAL 89


>gi|126276992|ref|XP_001365592.1| PREDICTED: forkhead box protein B1-like [Monodelphis domestica]
          Length = 323

 Score = 58.5 bits (140), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 22/31 (70%), Positives = 25/31 (80%)

Query: 4  NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL 34
          NS+RHNLS N CF+K+PR  DQPGKG FW L
Sbjct: 59 NSLRHNLSFNDCFIKIPRRPDQPGKGSFWAL 89


>gi|157134852|ref|XP_001656474.1| forkhead protein/ forkhead protein domain [Aedes aegypti]
 gi|108881334|gb|EAT45559.1| AAEL003173-PA [Aedes aegypti]
          Length = 435

 Score = 58.5 bits (140), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 23/31 (74%), Positives = 26/31 (83%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL 34
           NSIRH+LS N CFVKVPR+ D+PGKG FW L
Sbjct: 196 NSIRHSLSFNDCFVKVPRTPDKPGKGSFWTL 226


>gi|22859616|emb|CAD45552.1| fork head protein [Patella vulgata]
          Length = 435

 Score = 58.5 bits (140), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 33/50 (66%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR 51
           NSIRH+LS N CFVKVPR+ D+PGKG +W L  D   + E G   R  +R
Sbjct: 196 NSIRHSLSFNDCFVKVPRTPDRPGKGSYWALHPDSGNMFENGCYLRRQKR 245


>gi|2073554|gb|AAC60128.1| axolotl fork head protein [Ambystoma mexicanum]
          Length = 417

 Score = 58.5 bits (140), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 31/71 (43%), Positives = 40/71 (56%), Gaps = 9/71 (12%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRRKSSD------ 55
           NSIRH+LS N CFVKVPRS ++PGKG +W L  D   + E G   R  +R   D      
Sbjct: 179 NSIRHSLSFNDCFVKVPRSPEKPGKGSYWALHPDSGNMFENGCYLRRQKRFKCDRRSGSK 238

Query: 56  -IQHRKQAHRP 65
            +Q    +H+P
Sbjct: 239 RVQDENGSHQP 249


>gi|410978193|ref|XP_003995480.1| PREDICTED: forkhead box protein B2, partial [Felis catus]
          Length = 110

 Score = 58.5 bits (140), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 32/50 (64%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR 51
           NS+RHNLS N CF+K+PR  DQPGKG FW L  D   + E G   R  +R
Sbjct: 59  NSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPDCGDMFENGSFLRRRKR 108


>gi|297289905|ref|XP_001119000.2| PREDICTED: forkhead box protein C1 [Macaca mulatta]
          Length = 444

 Score = 58.5 bits (140), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLN+CFVKVPR   +PGKG +W LD
Sbjct: 124 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLD 155


>gi|442631649|ref|NP_001261701.1| forkhead domain 68A, isoform N [Drosophila melanogaster]
 gi|440215622|gb|AGB94395.1| forkhead domain 68A, isoform N [Drosophila melanogaster]
          Length = 760

 Score = 58.5 bits (140), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 23/32 (71%), Positives = 29/32 (90%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLN+ F+KV RS+D+PGKG FW++D
Sbjct: 500 NSIRHNLSLNRYFIKVARSQDEPGKGSFWRID 531


>gi|395507755|ref|XP_003758186.1| PREDICTED: hepatocyte nuclear factor 3-beta-like [Sarcophilus
           harrisii]
          Length = 466

 Score = 58.5 bits (140), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 29/56 (51%), Positives = 35/56 (62%), Gaps = 2/56 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRRKSSDIQ 57
           NSIRH+LS N CF+KVPRS D+PGKG FW L  D   + E G   R  +R   + Q
Sbjct: 209 NSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCEKQ 264


>gi|134142824|ref|NP_004465.3| forkhead box protein D2 [Homo sapiens]
 gi|182705227|sp|O60548.2|FOXD2_HUMAN RecName: Full=Forkhead box protein D2; AltName:
           Full=Forkhead-related protein FKHL17; AltName:
           Full=Forkhead-related transcription factor 9;
           Short=FREAC-9
          Length = 495

 Score = 58.5 bits (140), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 23/32 (71%), Positives = 25/32 (78%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLN CFVK+PR    PGKG +W LD
Sbjct: 173 NSIRHNLSLNDCFVKIPREPGNPGKGNYWTLD 204


>gi|440908320|gb|ELR58351.1| Forkhead box protein B2, partial [Bos grunniens mutus]
          Length = 98

 Score = 58.5 bits (140), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 32/50 (64%), Gaps = 2/50 (4%)

Query: 4  NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR 51
          NS+RHNLS N CF+K+PR  DQPGKG FW L  D   + E G   R  +R
Sbjct: 47 NSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPDCGDMFENGSFLRRRKR 96


>gi|148696583|gb|EDL28530.1| mCG10586, isoform CRA_b [Mus musculus]
          Length = 429

 Score = 58.5 bits (140), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 33/50 (66%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR 51
           NSIRH+LS N CF+KVPRS D+PGKG FW L  D   + E G   R  +R
Sbjct: 175 NSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKR 224


>gi|126304289|ref|XP_001382097.1| PREDICTED: hepatocyte nuclear factor 3-beta-like [Monodelphis
           domestica]
          Length = 465

 Score = 58.5 bits (140), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 29/56 (51%), Positives = 35/56 (62%), Gaps = 2/56 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRRKSSDIQ 57
           NSIRH+LS N CF+KVPRS D+PGKG FW L  D   + E G   R  +R   + Q
Sbjct: 209 NSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCEKQ 264


>gi|355689085|gb|AER98713.1| forkhead box A2 [Mustela putorius furo]
          Length = 275

 Score = 58.5 bits (140), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 29/56 (51%), Positives = 35/56 (62%), Gaps = 2/56 (3%)

Query: 4  NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRRKSSDIQ 57
          NSIRH+LS N CF+KVPRS D+PGKG FW L  D   + E G   R  +R   + Q
Sbjct: 23 NSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCEKQ 78


>gi|363737566|ref|XP_003641864.1| PREDICTED: forkhead box protein B1-like [Gallus gallus]
          Length = 320

 Score = 58.5 bits (140), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 22/31 (70%), Positives = 25/31 (80%)

Query: 4  NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL 34
          NS+RHNLS N CF+K+PR  DQPGKG FW L
Sbjct: 59 NSLRHNLSFNDCFIKIPRRPDQPGKGSFWAL 89


>gi|432092127|gb|ELK24813.1| Forkhead box protein A2 [Myotis davidii]
          Length = 222

 Score = 58.5 bits (140), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 29/56 (51%), Positives = 35/56 (62%), Gaps = 2/56 (3%)

Query: 4  NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRRKSSDIQ 57
          NSIRH+LS N CF+KVPRS D+PGKG FW L  D   + E G   R  +R   + Q
Sbjct: 36 NSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCEKQ 91


>gi|303388045|ref|XP_003072257.1| Forkhead/HNF3 transcription factor [Encephalitozoon intestinalis
           ATCC 50506]
 gi|303301396|gb|ADM10897.1| Forkhead/HNF3 transcription factor [Encephalitozoon intestinalis
           ATCC 50506]
          Length = 217

 Score = 58.5 bits (140), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 52/120 (43%), Gaps = 12/120 (10%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEGGGRYRNVRRKSSDIQHRKQAH 63
           NSIRHNLSLNK F KVPR+   PGKG FWK++ +     G +     R        + A 
Sbjct: 88  NSIRHNLSLNKSFYKVPRTSANPGKGSFWKINYEFQNSKGSQKTYRSRNKYSFNSNRDAE 147

Query: 64  RPKPAPSENLNTAYTNNNSIAPGE------------NLNKLEDKLDDTLMESEISMTDDI 111
           +   + SE L       +SI   E            NL  L D LD +  +      DD+
Sbjct: 148 KNVNSISELLGAQQGFFDSIGVTEVPFERHTTVFDGNLTSLSDCLDHSYQKEYFDHNDDL 207


>gi|167525363|ref|XP_001747016.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163774311|gb|EDQ87940.1| predicted protein [Monosiga brevicollis MX1]
          Length = 613

 Score = 58.5 bits (140), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 33/75 (44%), Positives = 46/75 (61%), Gaps = 8/75 (10%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL------DLQKLEEGGGRYRNVRRKSSDIQ 57
           NSIRHNLSLNK F+KVPRSK + GKG +W L      D  K+    G  R ++R++S  +
Sbjct: 265 NSIRHNLSLNKHFIKVPRSKTEKGKGAYWTLARDEKGDCLKVRLASG--RQLQRENSTER 322

Query: 58  HRKQAHRPKPAPSEN 72
             + A   +P PS++
Sbjct: 323 PPEMASEQQPQPSQH 337


>gi|45384420|ref|NP_990282.1| forkhead box protein D3 [Gallus gallus]
 gi|3913839|sp|P79772.1|FOXD3_CHICK RecName: Full=Forkhead box protein D3; AltName: Full=HNF3/FH
           transcription factor genesis; AltName: Full=Winged-helix
           protein CWH-3
 gi|1766077|gb|AAC60066.1| winged helix protein CWH-3 [Gallus gallus]
          Length = 394

 Score = 58.5 bits (140), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 24/34 (70%), Positives = 26/34 (76%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQ 37
           NSIRHNLSLN CFVK+PR    PGKG +W LD Q
Sbjct: 163 NSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPQ 196


>gi|60202495|gb|AAX14633.1| fork head transcription factor short isoform [Drosophila
           melanogaster]
          Length = 654

 Score = 58.5 bits (140), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 23/32 (71%), Positives = 29/32 (90%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLN+ F+KV RS+D+PGKG FW++D
Sbjct: 494 NSIRHNLSLNRYFIKVARSQDEPGKGSFWRID 525


>gi|443706725|gb|ELU02639.1| hypothetical protein CAPTEDRAFT_49410, partial [Capitella teleta]
          Length = 103

 Score = 58.5 bits (140), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 25/32 (78%), Positives = 27/32 (84%)

Query: 4  NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
          NSIRHNLSLN CFVKVPR K +PGKG +W LD
Sbjct: 51 NSIRHNLSLNDCFVKVPREKGKPGKGNYWTLD 82


>gi|76157466|gb|AAX28380.2| SJCHGC04333 protein [Schistosoma japonicum]
          Length = 264

 Score = 58.5 bits (140), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 23/33 (69%), Positives = 29/33 (87%)

Query: 3  VNSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
          +NSIRHNLSLN+ F++VPRS  +PGKG FW+LD
Sbjct: 8  MNSIRHNLSLNRYFIRVPRSHSEPGKGAFWQLD 40


>gi|112983671|ref|NP_001037329.1| silk gland factor 1 [Bombyx mori]
 gi|2494508|sp|Q17241.1|SGF1_BOMMO RecName: Full=Silk gland factor 1; Short=SGF-1
 gi|559307|dbj|BAA07523.1| silk gland factor-1 [Bombyx mori]
          Length = 349

 Score = 58.5 bits (140), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 33/50 (66%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR 51
           NSIRH+LS N CFVKVPR+ D+PGKG FW L  D   + E G   R  +R
Sbjct: 159 NSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHPDSGNMFENGCFLRRQKR 208


>gi|291383330|ref|XP_002708235.1| PREDICTED: FOXD4-like [Oryctolagus cuniculus]
          Length = 452

 Score = 58.5 bits (140), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 23/32 (71%), Positives = 25/32 (78%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLN CFVK+PR    PGKG +W LD
Sbjct: 156 NSIRHNLSLNDCFVKIPREPGHPGKGNYWSLD 187


>gi|242019779|ref|XP_002430336.1| Hepatocyte nuclear factor 3-gamma, putative [Pediculus humanus
           corporis]
 gi|212515460|gb|EEB17598.1| Hepatocyte nuclear factor 3-gamma, putative [Pediculus humanus
           corporis]
          Length = 354

 Score = 58.5 bits (140), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLN+CFVKVPR   +PGKG +W LD
Sbjct: 84  NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLD 115


>gi|443717659|gb|ELU08626.1| hypothetical protein CAPTEDRAFT_169665 [Capitella teleta]
          Length = 357

 Score = 58.5 bits (140), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 33/50 (66%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR 51
           NSIRH+LS N CFVKVPRS D+PGKG +W L  D   + E G   R  +R
Sbjct: 69  NSIRHSLSFNDCFVKVPRSPDRPGKGSYWTLHPDSGNMFENGCYLRRQKR 118


>gi|426241746|ref|XP_004014750.1| PREDICTED: hepatocyte nuclear factor 3-beta, partial [Ovis aries]
          Length = 367

 Score = 58.5 bits (140), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 29/56 (51%), Positives = 35/56 (62%), Gaps = 2/56 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRRKSSDIQ 57
           NSIRH+LS N CF+KVPRS D+PGKG FW L  D   + E G   R  +R   + Q
Sbjct: 111 NSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCEKQ 166


>gi|392348225|ref|XP_233422.4| PREDICTED: forkhead box protein D2 [Rattus norvegicus]
          Length = 494

 Score = 58.5 bits (140), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 23/32 (71%), Positives = 25/32 (78%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLN CFVK+PR    PGKG +W LD
Sbjct: 177 NSIRHNLSLNDCFVKIPREPGNPGKGNYWTLD 208


>gi|351698415|gb|EHB01334.1| Forkhead box protein B1 [Heterocephalus glaber]
          Length = 325

 Score = 58.5 bits (140), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 22/31 (70%), Positives = 25/31 (80%)

Query: 4  NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL 34
          NS+RHNLS N CF+K+PR  DQPGKG FW L
Sbjct: 59 NSLRHNLSFNDCFIKIPRRPDQPGKGSFWAL 89


>gi|58332618|ref|NP_001011383.1| forkhead box protein D3 [Xenopus (Silurana) tropicalis]
 gi|82179386|sp|Q5M7L9.1|FOXD3_XENTR RecName: Full=Forkhead box protein D3; Short=FoxD3
 gi|56788859|gb|AAH88566.1| forkhead box D3 [Xenopus (Silurana) tropicalis]
 gi|89268301|emb|CAJ82837.1| forkhead box D3 [Xenopus (Silurana) tropicalis]
          Length = 369

 Score = 58.5 bits (140), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 24/34 (70%), Positives = 26/34 (76%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQ 37
           NSIRHNLSLN CFVK+PR    PGKG +W LD Q
Sbjct: 138 NSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPQ 171


>gi|313230717|emb|CBY08115.1| unnamed protein product [Oikopleura dioica]
          Length = 479

 Score = 58.5 bits (140), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 33/50 (66%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR 51
           NSIRH+LS N CFVKVPRS ++PGKG +W L  D   + E G   R  +R
Sbjct: 164 NSIRHSLSFNDCFVKVPRSAEKPGKGSYWTLHEDANNMFENGCYLRRQKR 213


>gi|109004127|ref|XP_001109731.1| PREDICTED: hypothetical protein LOC710284 [Macaca mulatta]
          Length = 495

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/32 (71%), Positives = 25/32 (78%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLN CFVK+PR    PGKG +W LD
Sbjct: 173 NSIRHNLSLNDCFVKIPREPGNPGKGNYWTLD 204


>gi|148230981|ref|NP_001079026.1| forkhead box protein D3-A [Xenopus laevis]
 gi|82247048|sp|Q9DEN4.1|FXD3A_XENLA RecName: Full=Forkhead box protein D3-A; Short=FoxD3-A;
           Short=FoxD3a; AltName: Full=Fork head domain-related
           protein 6; Short=FKH-6; Short=Forkhead protein 6;
           Short=xFD-6; Short=xFKH6
 gi|4107097|dbj|BAA36334.1| XFD-6 [Xenopus laevis]
 gi|10801038|emb|CAC12963.1| winged helix transcription factor [Xenopus laevis]
 gi|114107898|gb|AAI23273.1| Foxd3-A protein [Xenopus laevis]
          Length = 371

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/34 (70%), Positives = 26/34 (76%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQ 37
           NSIRHNLSLN CFVK+PR    PGKG +W LD Q
Sbjct: 140 NSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPQ 173


>gi|195122164|ref|XP_002005582.1| GI20546 [Drosophila mojavensis]
 gi|193910650|gb|EDW09517.1| GI20546 [Drosophila mojavensis]
          Length = 481

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 32/50 (64%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRR 51
           NSIRHNLSLN CF+KVPR    PGKG FW LD   + + + G   R  +R
Sbjct: 140 NSIRHNLSLNDCFIKVPREPGNPGKGNFWTLDPLAEDMFDNGSFLRRRKR 189


>gi|3090887|gb|AAC15421.1| forkhead-related transcription factor FREAC-9 [Homo sapiens]
 gi|119627271|gb|EAX06866.1| forkhead box D2 [Homo sapiens]
          Length = 497

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/32 (71%), Positives = 25/32 (78%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLN CFVK+PR    PGKG +W LD
Sbjct: 173 NSIRHNLSLNDCFVKIPREPGNPGKGNYWTLD 204


>gi|410032916|ref|XP_003954417.1| PREDICTED: LOW QUALITY PROTEIN: forkhead box protein D2 [Pan
           troglodytes]
          Length = 493

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/32 (71%), Positives = 25/32 (78%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLN CFVK+PR    PGKG +W LD
Sbjct: 173 NSIRHNLSLNDCFVKIPREPGNPGKGNYWTLD 204


>gi|313220795|emb|CBY31635.1| unnamed protein product [Oikopleura dioica]
          Length = 479

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 33/50 (66%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR 51
           NSIRH+LS N CFVKVPRS ++PGKG +W L  D   + E G   R  +R
Sbjct: 164 NSIRHSLSFNDCFVKVPRSAEKPGKGSYWTLHEDANNMFENGCYLRRQKR 213


>gi|198469555|ref|XP_002134345.1| GA23375 [Drosophila pseudoobscura pseudoobscura]
 gi|198146926|gb|EDY72972.1| GA23375 [Drosophila pseudoobscura pseudoobscura]
          Length = 338

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/69 (47%), Positives = 40/69 (57%), Gaps = 8/69 (11%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQK----LEEGGGRYRNVRRKSSDIQH- 58
           NSIRHNLSLN CFV+VPR+ D PG+G +W LD       + E  GR R     S+  QH 
Sbjct: 122 NSIRHNLSLNPCFVRVPRALDDPGRGHYWALDPYAEDLTIGETTGRLRRSHTASAG-QHL 180

Query: 59  --RKQAHRP 65
             R +A  P
Sbjct: 181 LGRSKAAHP 189


>gi|190576685|gb|ACE79150.1| winged helix/forkhead transcription factor FoxB [Branchiostoma
           floridae]
          Length = 330

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 33/59 (55%), Gaps = 3/59 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQ---KLEEGGGRYRNVRRKSSDIQHR 59
           NS+RHNLS N CF+K+PR  DQPGKG FW L        E G    R  R KS   Q +
Sbjct: 59  NSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPMCGDMFENGSFLRRRKRFKSMPRQQK 117


>gi|115533188|ref|NP_001041116.1| Protein PHA-4, isoform c [Caenorhabditis elegans]
 gi|94960407|emb|CAK12560.1| Protein PHA-4, isoform c [Caenorhabditis elegans]
          Length = 411

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/72 (44%), Positives = 43/72 (59%), Gaps = 4/72 (5%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRRKSSDIQHRKQ 61
           NSIRH+LS N CFVKV RS D+PGKG FW L      + E G   R  R+K   ++ R+ 
Sbjct: 187 NSIRHSLSFNDCFVKVARSPDKPGKGSFWTLHEHCGNMFENGCYLR--RQKRFKVKEREP 244

Query: 62  AHRPKPAPSENL 73
           + + + A S+ L
Sbjct: 245 SRKKRNANSQQL 256


>gi|312379107|gb|EFR25491.1| hypothetical protein AND_09124 [Anopheles darlingi]
          Length = 510

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/89 (39%), Positives = 48/89 (53%), Gaps = 3/89 (3%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRRKSSDIQHRKQ 61
           NSIRH+LS N CFVKVPR+ D+PGKG FW L  D   + E G   R  +R   + +   +
Sbjct: 216 NSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKDEKKEVLR 275

Query: 62  AHRPKPAPSENLNTAYTNNNSIAPGENLN 90
           +    PA   +L+ A  + +   P E  N
Sbjct: 276 SLHKSPAHGGSLD-AVNSPDKKDPNEQDN 303


>gi|218675730|gb|AAI69306.2| forkhead box C1 [synthetic construct]
          Length = 310

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLN+CFVKVPR   +PGKG +W LD
Sbjct: 124 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLD 155


>gi|195426399|ref|XP_002061322.1| GK20787 [Drosophila willistoni]
 gi|194157407|gb|EDW72308.1| GK20787 [Drosophila willistoni]
          Length = 467

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 32/50 (64%), Gaps = 2/50 (4%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRR 51
           NSIRHNLSLN CF+KVPR    PGKG FW LD   + + + G   R  +R
Sbjct: 125 NSIRHNLSLNDCFIKVPREPGNPGKGNFWTLDPLAEDMFDNGSFLRRRKR 174


>gi|118343780|ref|NP_001071708.1| transcription factor protein [Ciona intestinalis]
 gi|70569557|dbj|BAE06434.1| transcription factor protein [Ciona intestinalis]
          Length = 511

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 22/32 (68%), Positives = 27/32 (84%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLN+CFVK+PR   +PGKG +W +D
Sbjct: 145 NSIRHNLSLNECFVKIPRDDKKPGKGSYWTMD 176


>gi|327270874|ref|XP_003220213.1| PREDICTED: forkhead box protein D3-like [Anolis carolinensis]
          Length = 386

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/34 (70%), Positives = 26/34 (76%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQ 37
           NSIRHNLSLN CFVK+PR    PGKG +W LD Q
Sbjct: 136 NSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPQ 169


>gi|109477031|ref|XP_001069350.1| PREDICTED: forkhead box protein D2 [Rattus norvegicus]
          Length = 459

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/32 (71%), Positives = 25/32 (78%)

Query: 4   NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
           NSIRHNLSLN CFVK+PR    PGKG +W LD
Sbjct: 142 NSIRHNLSLNDCFVKIPREPGNPGKGNYWTLD 173


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.313    0.134    0.393 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,574,672,307
Number of Sequences: 23463169
Number of extensions: 109139592
Number of successful extensions: 247675
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3130
Number of HSP's successfully gapped in prelim test: 954
Number of HSP's that attempted gapping in prelim test: 244268
Number of HSP's gapped (non-prelim): 4209
length of query: 147
length of database: 8,064,228,071
effective HSP length: 110
effective length of query: 37
effective length of database: 9,778,246,777
effective search space: 361795130749
effective search space used: 361795130749
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 71 (32.0 bits)