BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4401
(147 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q63247|FOXJ1_RAT Forkhead box protein J1 OS=Rattus norvegicus GN=Foxj1 PE=2 SV=1
Length = 421
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Query: 4 NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE-GGGRYRNVRRKSSDIQ---HR 59
NSIRHNLSLNKCF+KVPR KD+PGKGGFW++D Q E G ++ R I R
Sbjct: 167 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRRLPPVHIHPAFAR 226
Query: 60 KQAHRPKPAP 69
+ A P AP
Sbjct: 227 QAAQEPSTAP 236
>sp|Q92949|FOXJ1_HUMAN Forkhead box protein J1 OS=Homo sapiens GN=FOXJ1 PE=2 SV=3
Length = 421
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 4 NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE-GGGRYRNVRRKSSDIQ---HR 59
NSIRHNLSLNKCF+KVPR KD+PGKGGFW++D Q E G ++ R I R
Sbjct: 167 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRRLPPVHIHPAFAR 226
Query: 60 KQAHRPKPAPSENLNTAYTNNNSI 83
+ A P P T T +
Sbjct: 227 QAAQEPSAVPRAGPLTVNTEAQQL 250
>sp|Q61660|FOXJ1_MOUSE Forkhead box protein J1 OS=Mus musculus GN=Foxj1 PE=2 SV=2
Length = 421
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Query: 4 NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE-GGGRYRNVRRKSSDIQ---HR 59
NSIRHNLSLNKCF+KVPR KD+PGKGGFW++D Q E G ++ R I R
Sbjct: 167 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRRLPPVHIHPAFAR 226
Query: 60 KQAHRPKPAP 69
+ + P AP
Sbjct: 227 QASQEPSAAP 236
>sp|Q708W1|FXJ1B_XENLA Forkhead box protein J1-B OS=Xenopus laevis GN=foxj1-b PE=2 SV=1
Length = 439
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/49 (65%), Positives = 38/49 (77%), Gaps = 3/49 (6%)
Query: 4 NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQ---KLEEGGGRYRNV 49
NSIRHNLSLNKCF+KVPR KD+PGKGGFWK+D Q +L G + R +
Sbjct: 170 NSIRHNLSLNKCFIKVPREKDEPGKGGFWKIDPQYADRLMNGAMKKRRL 218
>sp|Q5M7N6|FOXJ1_XENTR Forkhead box protein J1 OS=Xenopus tropicalis GN=foxj1 PE=2 SV=2
Length = 438
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 29/34 (85%), Positives = 32/34 (94%)
Query: 4 NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQ 37
NSIRHNLSLNKCF+KVPR KD+PGKGGFWK+D Q
Sbjct: 169 NSIRHNLSLNKCFIKVPREKDEPGKGGFWKIDPQ 202
>sp|Q708W2|FXJ1A_XENLA Forkhead box protein J1-A OS=Xenopus laevis GN=foxj1-a PE=2 SV=1
Length = 439
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 29/34 (85%), Positives = 32/34 (94%)
Query: 4 NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQ 37
NSIRHNLSLNKCF+KVPR KD+PGKGGFWK+D Q
Sbjct: 170 NSIRHNLSLNKCFMKVPREKDEPGKGGFWKIDPQ 203
>sp|Q66IG8|FXJ12_XENTR Forkhead box protein J1.2 OS=Xenopus tropicalis GN=foxj1.2 PE=2
SV=1
Length = 371
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 27/32 (84%), Positives = 31/32 (96%)
Query: 4 NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
NSIRHNLSLNKCF+KVPR KD+PGKGGFW++D
Sbjct: 155 NSIRHNLSLNKCFMKVPRGKDEPGKGGFWQMD 186
>sp|Q32NH9|FXJ12_XENLA Forkhead box protein J1.2 OS=Xenopus laevis GN=foxj1.2 PE=2 SV=1
Length = 370
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 27/32 (84%), Positives = 31/32 (96%)
Query: 4 NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
NSIRHNLSLNKCF+KVPR KD+PGKGGFW++D
Sbjct: 154 NSIRHNLSLNKCFMKVPRGKDEPGKGGFWQMD 185
>sp|Q8BUR3|FOXJ3_MOUSE Forkhead box protein J3 OS=Mus musculus GN=Foxj3 PE=2 SV=1
Length = 623
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 38/56 (67%), Gaps = 5/56 (8%)
Query: 4 NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-----GGRYRNVRRKSS 54
NSIRHNLSLNKCF+KVPRSKD PGKG +W +D E+ R R+V R S+
Sbjct: 124 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDTLPTRPKKRARSVERAST 179
>sp|Q9UPW0|FOXJ3_HUMAN Forkhead box protein J3 OS=Homo sapiens GN=FOXJ3 PE=1 SV=2
Length = 622
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 38/56 (67%), Gaps = 5/56 (8%)
Query: 4 NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE-----GGGRYRNVRRKSS 54
NSIRHNLSLNKCF+KVPRSKD PGKG +W +D E+ R R+V R S+
Sbjct: 124 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDVLPTRPKKRARSVERAST 179
>sp|Q64731|FOXL1_MOUSE Forkhead box protein L1 OS=Mus musculus GN=Foxl1 PE=2 SV=2
Length = 336
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 4 NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSSDIQHRKQA 62
NSIRHNLSLN+CFVKVPR K +PGKG +W LD + L+ G YR +RK +A
Sbjct: 95 NSIRHNLSLNECFVKVPREKGRPGKGSYWTLDPRCLDMFENGNYRRRKRKPKPAAGSPEA 154
Query: 63 HRPKPAPSEN 72
R + P E+
Sbjct: 155 KRTRVEPPES 164
>sp|Q12952|FOXL1_HUMAN Forkhead box protein L1 OS=Homo sapiens GN=FOXL1 PE=2 SV=2
Length = 345
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 4 NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEE-GGGRYRNVRRKSSDIQHRKQA 62
NSIRHNLSLN CFVKVPR K +PGKG +W LD + L+ G YR +RK +A
Sbjct: 95 NSIRHNLSLNDCFVKVPREKGRPGKGSYWTLDPRCLDMFENGNYRRRKRKPKPGPGAPEA 154
Query: 63 HRPK 66
RP+
Sbjct: 155 KRPR 158
>sp|Q99958|FOXC2_HUMAN Forkhead box protein C2 OS=Homo sapiens GN=FOXC2 PE=1 SV=1
Length = 501
Score = 65.9 bits (159), Expect = 8e-11, Method: Composition-based stats.
Identities = 40/94 (42%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Query: 4 NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVRRKSSDIQHRK 60
NSIRHNLSLN+CFVKVPR +PGKG +W LD E G R R K D+ K
Sbjct: 118 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVSKEK 177
Query: 61 Q--AHRPKPAPSENLNTAYTNNNSIAPGENLNKL 92
+ AH +P P+ + T + + AP E K+
Sbjct: 178 EERAHLKEPPPAASKGAPATPHLADAPKEAEKKV 211
>sp|Q7ZYQ0|FXI1E_XENLA Forkhead box protein I1-ema OS=Xenopus laevis GN=foxi1e PE=2 SV=1
Length = 373
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 4 NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDIQHRKQ 61
NSIRHNLSLN CF KVPR +D PGKG +W LD +K+ + G +R R++ SD+ Q
Sbjct: 169 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFD-NGNFRRKRKRKSDVSPNGQ 227
Query: 62 AHRPKP 67
KP
Sbjct: 228 LSSDKP 233
>sp|Q6P8A3|FXI1E_XENTR Forkhead box protein I1-ema OS=Xenopus tropicalis GN=foxi1e PE=2
SV=1
Length = 373
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 4 NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDIQHRKQ 61
NSIRHNLSLN CF KVPR +D PGKG +W LD +K+ + G +R R++ SD+ Q
Sbjct: 169 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFD-NGNFRRKRKRKSDVSPNGQ 227
Query: 62 AHRPKP 67
KP
Sbjct: 228 ISSDKP 233
>sp|Q9DE25|FXC1A_DANRE Forkhead box C1-A OS=Danio rerio GN=foxc1a PE=2 SV=1
Length = 476
Score = 63.2 bits (152), Expect = 6e-10, Method: Composition-based stats.
Identities = 38/94 (40%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 4 NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVRRKSSDIQHRK 60
NSIRHNLSLN+CFVKVPR +PGKG +W LD E G R R K D K
Sbjct: 120 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDAMKDK 179
Query: 61 QAHRPKPAPSENLNTAYTNNNSIAPGENLNKLED 94
+ K APS PG +++D
Sbjct: 180 EDRGVKEAPSRQAQPQAREQEQSVPGSQPVRIQD 213
>sp|P32031|SLP2_DROME Fork head domain transcription factor slp2 OS=Drosophila
melanogaster GN=slp2 PE=2 SV=2
Length = 445
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Query: 4 NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDIQHRKQ 61
NSIRHNLSLNKCFVKVPR D PGKG +W LD + + GG + RR ++ + R
Sbjct: 226 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSAEDVFIGGSTGKLRRRTTAASRSRLA 285
Query: 62 AHR 64
A +
Sbjct: 286 AFK 288
>sp|Q1A1A6|FOXG1_CEBCA Forkhead box protein G1 OS=Cebus capucinus GN=FOXG1 PE=3 SV=1
Length = 489
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Query: 4 NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
NSIRHNLSLNKCFVKVPR D PGKG +W LD + GG +RR+S+
Sbjct: 227 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRST 278
>sp|Q1A1A1|FOXG1_CERSI Forkhead box protein G1 OS=Ceratotherium simum GN=FOXG1 PE=3 SV=1
Length = 486
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Query: 4 NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
NSIRHNLSLNKCFVKVPR D PGKG +W LD + GG +RR+S+
Sbjct: 224 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRST 275
>sp|Q60987|FOXG1_MOUSE Forkhead box protein G1 OS=Mus musculus GN=Foxg1 PE=2 SV=1
Length = 481
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Query: 4 NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
NSIRHNLSLNKCFVKVPR D PGKG +W LD + GG +RR+S+
Sbjct: 219 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRST 270
>sp|Q00939|FOXG1_RAT Forkhead box protein G1 OS=Rattus norvegicus GN=Foxg1 PE=2 SV=1
Length = 480
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Query: 4 NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
NSIRHNLSLNKCFVKVPR D PGKG +W LD + GG +RR+S+
Sbjct: 218 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRST 269
>sp|P55316|FOXG1_HUMAN Forkhead box protein G1 OS=Homo sapiens GN=FOXG1 PE=1 SV=2
Length = 489
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Query: 4 NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
NSIRHNLSLNKCFVKVPR D PGKG +W LD + GG +RR+S+
Sbjct: 227 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRST 278
>sp|Q1A1A5|FOXG1_CERPY Forkhead box protein G1 OS=Cercopithecus pygerythrus GN=FOXG1 PE=3
SV=1
Length = 489
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Query: 4 NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
NSIRHNLSLNKCFVKVPR D PGKG +W LD + GG +RR+S+
Sbjct: 227 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRST 278
>sp|Q1A1A2|FOXG1_EQUBU Forkhead box protein G1 OS=Equus burchelli GN=FOXG1 PE=3 SV=1
Length = 488
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Query: 4 NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
NSIRHNLSLNKCFVKVPR D PGKG +W LD + GG +RR+S+
Sbjct: 226 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRST 277
>sp|Q1A1A3|FOXG1_EPOGA Forkhead box protein G1 OS=Epomophorus gambianus GN=FOXG1 PE=3 SV=1
Length = 485
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Query: 4 NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
NSIRHNLSLNKCFVKVPR D PGKG +W LD + GG +RR+S+
Sbjct: 223 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRST 274
>sp|Q1A1A4|FOXG1_PIPRU Forkhead box protein G1 OS=Pipistrellus rusticus GN=FOXG1 PE=3 SV=1
Length = 484
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Query: 4 NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
NSIRHNLSLNKCFVKVPR D PGKG +W LD + GG +RR+S+
Sbjct: 222 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRST 273
>sp|Q9YHC5|FOXG1_XENLA Forkhead box protein G1 OS=Xenopus laevis GN=foxg1 PE=2 SV=1
Length = 436
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Query: 4 NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
NSIRHNLSLNKCFVKVPR D PGKG +W LD + GG +RR+S+
Sbjct: 174 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRST 225
>sp|Q12951|FOXI1_HUMAN Forkhead box protein I1 OS=Homo sapiens GN=FOXI1 PE=1 SV=3
Length = 378
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 3/55 (5%)
Query: 4 NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKSSDI 56
NSIRHNLSLN CF KVPR +D PGKG +W LD +K+ + G +R R++ SD+
Sbjct: 169 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFD-NGNFRRKRKRKSDV 222
>sp|Q90964|FOXG1_CHICK Forkhead box protein G1 OS=Gallus gallus GN=FOXG1 PE=2 SV=1
Length = 451
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Query: 4 NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
NSIRHNLSLNKCFVKVPR D PGKG +W LD + GG +RR+S+
Sbjct: 189 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRST 240
>sp|P85037|FOXK1_HUMAN Forkhead box protein K1 OS=Homo sapiens GN=FOXK1 PE=1 SV=1
Length = 733
Score = 61.2 bits (147), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)
Query: 4 NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
NSIRHNLSLN+ F+KVPRS+++PGKG FW++D KL E R R R
Sbjct: 351 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQR 400
>sp|P56260|QIN_AVIS3 Transforming protein Qin OS=Avian sarcoma virus (strain 31)
GN=V-QIN PE=2 SV=1
Length = 387
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Query: 4 NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEG-GGRYRNVRRKSS 54
NSIRHNLSLNKCFVKVPR D PGKG +W LD + GG +RR+S+
Sbjct: 189 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTDKLRRRST 240
>sp|Q7ZX03|FOXK2_XENLA Forkhead box protein K2 OS=Xenopus laevis GN=foxk2 PE=2 SV=2
Length = 642
Score = 60.8 bits (146), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)
Query: 4 NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
NSIRHNLSLN+ F+KVPRS+++PGKG FW++D KL E R R R
Sbjct: 265 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLVEQAFRKRRPR 314
>sp|O14270|FHL1_SCHPO Fork head transcription factor 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=fhl1 PE=4 SV=2
Length = 743
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 54/117 (46%), Gaps = 2/117 (1%)
Query: 4 NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLEEGGGRYRNVRRKSSDIQHRKQAH 63
NSIRHNLSLNK F+++PR +++PGKG FW LD +++ G + RR A
Sbjct: 337 NSIRHNLSLNKAFIRIPRRQNEPGKGSFWMLDPSYIDQFEGNF--FRRTKKPTPSATPAA 394
Query: 64 RPKPAPSENLNTAYTNNNSIAPGENLNKLEDKLDDTLMESEISMTDDIDEDLILSNI 120
P A L T S E LN ++ S +D + L+ + I
Sbjct: 395 HPDTARENELAAIQTKGISAGKTEQLNPQKETSRSKTHTSRGENVEDRPQSLLQNGI 451
>sp|P32030|SLP1_DROME Fork head domain transcription factor slp1 OS=Drosophila
melanogaster GN=slp1 PE=2 SV=1
Length = 322
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/32 (78%), Positives = 27/32 (84%)
Query: 4 NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
NSIRHNLSLNKCF K+PRS D PGKG +W LD
Sbjct: 166 NSIRHNLSLNKCFTKIPRSYDDPGKGNYWILD 197
>sp|P42128|FOXK1_MOUSE Forkhead box protein K1 OS=Mus musculus GN=Foxk1 PE=1 SV=2
Length = 719
Score = 60.8 bits (146), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)
Query: 4 NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
NSIRHNLSLN+ F+KVPRS+++PGKG FW++D KL E R R R
Sbjct: 337 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQR 386
>sp|Q64733|FOXB2_MOUSE Forkhead box protein B2 OS=Mus musculus GN=Foxb2 PE=2 SV=1
Length = 428
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 4 NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRRKSSDIQHRKQ 61
NS+RHNLS N CF+K+PR DQPGKG FW L D + E G R RRK +
Sbjct: 59 NSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPDCGDMFENGSFLR--RRKRFKVLRADH 116
Query: 62 AH 63
AH
Sbjct: 117 AH 118
>sp|Q07342|FOXA2_DANRE Forkhead box protein A2 OS=Danio rerio GN=foxa2 PE=2 SV=1
Length = 409
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 4 NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRRKSSD 55
NSIRH+LS N CF+KVPRS D+PGKG FW L D + E G R +R D
Sbjct: 197 NSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCD 250
>sp|Q01167|FOXK2_HUMAN Forkhead box protein K2 OS=Homo sapiens GN=FOXK2 PE=1 SV=3
Length = 660
Score = 60.1 bits (144), Expect = 5e-09, Method: Composition-based stats.
Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)
Query: 4 NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
NSIRHNLSLN+ F+KVPRS+++PGKG FW++D KL E R R R
Sbjct: 304 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPR 353
>sp|Q3UCQ1|FOXK2_MOUSE Forkhead box protein K2 OS=Mus musculus GN=Foxk2 PE=2 SV=3
Length = 651
Score = 60.1 bits (144), Expect = 5e-09, Method: Composition-based stats.
Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)
Query: 4 NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVR 50
NSIRHNLSLN+ F+KVPRS+++PGKG FW++D KL E R R R
Sbjct: 295 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLVEQAFRKRRPR 344
>sp|Q12950|FOXD4_HUMAN Forkhead box protein D4 OS=Homo sapiens GN=FOXD4 PE=2 SV=4
Length = 439
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 4 NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDL--QKLEEGGGRYRNVRRKSSDIQHRKQ 61
NSIRHNLSLN CFVK+PR +PGKG +W LD Q + + G R R++ Q
Sbjct: 150 NSIRHNLSLNDCFVKIPREPGRPGKGNYWSLDPASQDMFDNGSFLRR-RKRFQRHQPTPG 208
Query: 62 AHRPKPAPSENLNTAYTN 79
AH P P P + A N
Sbjct: 209 AHLPHPFPLPAAHAALHN 226
>sp|P84961|FXA2B_XENLA Forkhead box protein A2-B OS=Xenopus laevis GN=foxa2-b PE=2 SV=1
Length = 433
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 4 NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRRKSSD 55
NSIRH+LS N CF+KVPRS D+PGKG FW L D + E G R +R D
Sbjct: 193 NSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCD 246
>sp|P32028|FD4_DROME Fork head domain-containing protein FD4 OS=Drosophila melanogaster
GN=fd96Ca PE=2 SV=2
Length = 372
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Query: 4 NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLDLQKLE--EGGGRYRNVRR 51
NS+RHNLS N CF+KVPR D+PGKG +W L Q + E G R +R
Sbjct: 59 NSLRHNLSFNDCFIKVPRRPDRPGKGAYWALHPQAFDMFENGSLLRRRKR 108
>sp|Q61850|FOXC2_MOUSE Forkhead box protein C2 OS=Mus musculus GN=Foxc2 PE=2 SV=2
Length = 494
Score = 59.7 bits (143), Expect = 7e-09, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 44/80 (55%), Gaps = 6/80 (7%)
Query: 4 NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD---LQKLEEGGGRYRNVRRKSSDIQHRK 60
NSIRHNLSLN+CFVKVPR +PGKG +W LD E G R R K D+ K
Sbjct: 117 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVPKDK 176
Query: 61 Q--AHRPKPAPSENLNTAYT 78
+ AH +P PS A T
Sbjct: 177 EERAHLKEP-PSTTAKGAPT 195
>sp|Q7T1R4|FOXA2_XENTR Forkhead box protein A2 OS=Xenopus tropicalis GN=foxa2 PE=2 SV=1
Length = 434
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
Query: 4 NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR 51
NSIRH+LS N CF+KVPRS D+PGKG FW L D + E G R +R
Sbjct: 195 NSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKR 244
>sp|Q91765|FXA2A_XENLA Forkhead box protein A2-A OS=Xenopus laevis GN=foxa2-a PE=1 SV=1
Length = 434
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
Query: 4 NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKL--DLQKLEEGGGRYRNVRR 51
NSIRH+LS N CF+KVPRS D+PGKG FW L D + E G R +R
Sbjct: 195 NSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKR 244
>sp|A8MTJ6|FOXI3_HUMAN Forkhead box protein I3 OS=Homo sapiens GN=FOXI3 PE=2 SV=3
Length = 420
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 36/52 (69%), Gaps = 2/52 (3%)
Query: 4 NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD--LQKLEEGGGRYRNVRRKS 53
NSIRHNLSLN CF KVPR +D PGKG +W LD +K+ + G R +R+S
Sbjct: 191 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRRS 242
>sp|Q9P0K8|FOXJ2_HUMAN Forkhead box protein J2 OS=Homo sapiens GN=FOXJ2 PE=1 SV=1
Length = 574
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 27/32 (84%)
Query: 4 NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
NSIRHNLSLNKCF KVPR +D PGKG +W +D
Sbjct: 112 NSIRHNLSLNKCFRKVPRPRDDPGKGSYWTID 143
>sp|Q9ES18|FOXJ2_MOUSE Forkhead box protein J2 OS=Mus musculus GN=Foxj2 PE=2 SV=1
Length = 565
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 27/32 (84%)
Query: 4 NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
NSIRHNLSLNKCF KVPR +D PGKG +W +D
Sbjct: 112 NSIRHNLSLNKCFRKVPRPRDDPGKGSYWTID 143
>sp|Q68EZ2|FOXJ2_XENLA Forkhead box protein J2 OS=Xenopus laevis GN=foxj2 PE=2 SV=1
Length = 512
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 27/32 (84%)
Query: 4 NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
NSIRHNLSLNKCF KVPR +D PGKG +W +D
Sbjct: 105 NSIRHNLSLNKCFRKVPRPRDDPGKGSYWMID 136
>sp|Q28EM1|FOXJ2_XENTR Forkhead box protein J2 OS=Xenopus tropicalis GN=foxj2 PE=2 SV=1
Length = 512
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 27/32 (84%)
Query: 4 NSIRHNLSLNKCFVKVPRSKDQPGKGGFWKLD 35
NSIRHNLSLNKCF KVPR +D PGKG +W +D
Sbjct: 105 NSIRHNLSLNKCFRKVPRPRDDPGKGSYWMID 136
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.134 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,358,921
Number of Sequences: 539616
Number of extensions: 2620082
Number of successful extensions: 6361
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 217
Number of HSP's successfully gapped in prelim test: 69
Number of HSP's that attempted gapping in prelim test: 6113
Number of HSP's gapped (non-prelim): 303
length of query: 147
length of database: 191,569,459
effective HSP length: 106
effective length of query: 41
effective length of database: 134,370,163
effective search space: 5509176683
effective search space used: 5509176683
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)