Your job contains 1 sequence.
>psy4403
MDPSGGSKEIVDYGGILKFKADTNASSVMIARAAQDNCSIFSPTKGIQDIHQMIKEYLRY
CVDYDNSAPNSKYCVQSMLGSQQESPLGKKFLESQTLEQIW
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy4403
(101 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0030554 - symbol:CG1434 species:7227 "Drosophila m... 263 3.5e-22 1
ZFIN|ZDB-GENE-100922-233 - symbol:dus2l "dihydrouridine s... 197 7.0e-15 1
UNIPROTKB|E7EUN9 - symbol:DUS2L "tRNA-dihydrouridine(20) ... 187 6.9e-14 1
UNIPROTKB|Q9NX74 - symbol:DUS2L "tRNA-dihydrouridine(20) ... 187 8.1e-14 1
UNIPROTKB|E1C4F6 - symbol:DUS2L "Uncharacterized protein"... 184 1.7e-13 1
UNIPROTKB|E2RKU2 - symbol:DUS2L "Uncharacterized protein"... 180 4.6e-13 1
UNIPROTKB|Q0VC60 - symbol:DUS2L "Uncharacterized protein"... 179 6.0e-13 1
MGI|MGI:1913619 - symbol:Dus2l "dihydrouridine synthase 2... 179 6.0e-13 1
RGD|1305612 - symbol:Dus2l "dihydrouridine synthase 2-lik... 179 6.0e-13 1
UNIPROTKB|I3LES5 - symbol:DUS2L "Uncharacterized protein"... 178 7.6e-13 1
TAIR|locus:2114713 - symbol:AT3G49640 species:3702 "Arabi... 146 9.8e-10 1
WB|WBGene00013201 - symbol:Y54E5A.6 species:6239 "Caenorh... 136 2.2e-08 1
DICTYBASE|DDB_G0283877 - symbol:dus2l "tRNA-dihydrouridin... 130 8.3e-08 1
POMBASE|SPBC1709.06 - symbol:dus2 "tRNA dihydrouridine sy... 94 0.00085 1
>FB|FBgn0030554 [details] [associations]
symbol:CG1434 species:7227 "Drosophila melanogaster"
[GO:0017150 "tRNA dihydrouridine synthase activity" evidence=ISS]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0008033 "tRNA
processing" evidence=IEA] InterPro:IPR001159 InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF00035 Pfam:PF01207
PROSITE:PS01136 SMART:SM00358 InterPro:IPR014720 Gene3D:3.20.20.70
GO:GO:0050660 EMBL:AE014298 Gene3D:3.30.160.20 GO:GO:0005622
GO:GO:0003725 GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
KO:K05543 GeneTree:ENSGT00550000075019 OMA:KEMIMHY
FlyBase:FBgn0030554 EMBL:BT031195 RefSeq:NP_572950.2 UniGene:Dm.163
SMR:Q9VY45 STRING:Q9VY45 EnsemblMetazoa:FBtr0073903 GeneID:32377
KEGG:dme:Dmel_CG1434 UCSC:CG1434-RA InParanoid:Q9VY45
GenomeRNAi:32377 NextBio:778177 Uniprot:Q9VY45
Length = 473
Score = 263 (97.6 bits), Expect = 3.5e-22, P = 3.5e-22
Identities = 52/97 (53%), Positives = 72/97 (74%)
Query: 4 SGGSKEIVDYGGILKFKADTNASSVMIARAAQDNCSIFSPTKGIQDIHQMIKEYLRYCVD 63
+GGSK + Y + KF+ + A SVM+ARAAQ N SIF P +G+ + ++I++YLR CVD
Sbjct: 227 NGGSKNMHCYDDLRKFQMECGADSVMVARAAQINVSIFRP-EGLLPMDELIEKYLRLCVD 285
Query: 64 YDNSAPNSKYCVQSMLGSQQESPLGKKFLESQTLEQI 100
YDN+ N+KYCVQS+L QE+P GK+FL+ QTL+QI
Sbjct: 286 YDNAPHNAKYCVQSILRELQETPRGKRFLQCQTLQQI 322
>ZFIN|ZDB-GENE-100922-233 [details] [associations]
symbol:dus2l "dihydrouridine synthase 2-like, SMM1
homolog (S. cerevisiae)" species:7955 "Danio rerio" [GO:0017150
"tRNA dihydrouridine synthase activity" evidence=IEA] [GO:0050660
"flavin adenine dinucleotide binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0008033 "tRNA
processing" evidence=IEA] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
InterPro:IPR001159 InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF00035 Pfam:PF01207 PROSITE:PS01136
PROSITE:PS50137 SMART:SM00358 InterPro:IPR014720
ZFIN:ZDB-GENE-100922-233 Gene3D:3.20.20.70 GO:GO:0050660
Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 CTD:54920 KO:K05543
GeneTree:ENSGT00550000075019 EMBL:CU855766 EMBL:CU855937
IPI:IPI00902127 RefSeq:XP_001342694.3 Ensembl:ENSDART00000110221
Ensembl:ENSDART00000139002 GeneID:100003049 KEGG:dre:100003049
NextBio:20785702 Uniprot:E7F220
Length = 504
Score = 197 (74.4 bits), Expect = 7.0e-15, P = 7.0e-15
Identities = 43/98 (43%), Positives = 64/98 (65%)
Query: 4 SGGSKEIV-DYGGILKFKADTNASSVMIARAAQDNCSIFSPTKGIQDIHQMIKEYLRYCV 62
+GGS +IV ++ I F+ T ASSVM+ARAA N S+F +G + Q+++EY+ Y V
Sbjct: 219 NGGSSDIVKEFEDIETFRESTGASSVMLARAAMWNPSVFRQ-QGALSVDQVMQEYITYAV 277
Query: 63 DYDNSAPNSKYCVQSMLGSQQESPLGKKFLESQTLEQI 100
YDN+ N+KYC+ ML + ESP GK+ +QT ++I
Sbjct: 278 RYDNNPFNTKYCLCQMLRDRVESPFGKRLHAAQTNQEI 315
>UNIPROTKB|E7EUN9 [details] [associations]
symbol:DUS2L "tRNA-dihydrouridine(20) synthase
[NAD(P)+]-like" species:9606 "Homo sapiens" [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001159 InterPro:IPR001269
InterPro:IPR013785 Pfam:PF00035 Pfam:PF01207 SMART:SM00358
InterPro:IPR014720 GO:GO:0005737 Gene3D:3.20.20.70 GO:GO:0050660
Gene3D:3.30.160.20 GO:GO:0003725 EMBL:AC130462 EMBL:AC040162
GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082 GeneID:54920
HGNC:HGNC:26014 IPI:IPI00909876 RefSeq:NP_001258692.1
ProteinModelPortal:E7EUN9 SMR:E7EUN9 Ensembl:ENST00000432752
UCSC:uc010vkk.2 ArrayExpress:E7EUN9 Bgee:E7EUN9 Uniprot:E7EUN9
Length = 458
Score = 187 (70.9 bits), Expect = 6.9e-14, P = 6.9e-14
Identities = 42/98 (42%), Positives = 62/98 (63%)
Query: 4 SGGSKE-IVDYGGILKFKADTNASSVMIARAAQDNCSIFSPTKGIQDIHQMIKEYLRYCV 62
+GGS + I Y I F+ T ASSVM+ARAA N SIF +G++ + +++++Y+RY V
Sbjct: 179 NGGSHDHIQQYSDIEDFRQATAASSVMVARAAMWNPSIFLK-EGLRPLEEVMQKYIRYAV 237
Query: 63 DYDNSAPNSKYCVQSMLGSQQESPLGKKFLESQTLEQI 100
YDN N+KYC+ ML Q ESP G+ +Q+ +I
Sbjct: 238 QYDNHYTNTKYCLCQMLREQLESPQGRLLHAAQSSREI 275
>UNIPROTKB|Q9NX74 [details] [associations]
symbol:DUS2L "tRNA-dihydrouridine(20) synthase
[NAD(P)+]-like" species:9606 "Homo sapiens" [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001159 InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF00035 Pfam:PF01207 PROSITE:PS01136
PROSITE:PS50137 SMART:SM00358 InterPro:IPR014720 GO:GO:0005783
GO:GO:0005739 GO:GO:0005737 Gene3D:3.20.20.70 GO:GO:0050660
Gene3D:3.30.160.20 GO:GO:0003725 EMBL:CH471092 eggNOG:COG0042
GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082 EMBL:AB101210
EMBL:AK000406 EMBL:AK290578 EMBL:BC006527 IPI:IPI00015804
RefSeq:NP_001258691.1 RefSeq:NP_060273.1 UniGene:Hs.534460
ProteinModelPortal:Q9NX74 SMR:Q9NX74 IntAct:Q9NX74 STRING:Q9NX74
PhosphoSite:Q9NX74 DMDM:73620832 PaxDb:Q9NX74 PRIDE:Q9NX74
DNASU:54920 Ensembl:ENST00000358896 Ensembl:ENST00000565263
GeneID:54920 KEGG:hsa:54920 UCSC:uc002evi.3 CTD:54920
GeneCards:GC16P068058 HGNC:HGNC:26014 HPA:HPA042560 HPA:HPA043528
MIM:609707 neXtProt:NX_Q9NX74 PharmGKB:PA142671937
HOGENOM:HOG000195580 HOVERGEN:HBG079551 InParanoid:Q9NX74 KO:K05543
OMA:YHNKLIL OrthoDB:EOG4MW85W PhylomeDB:Q9NX74 GenomeRNAi:54920
NextBio:57992 ArrayExpress:Q9NX74 Bgee:Q9NX74 CleanEx:HS_DUS2L
Genevestigator:Q9NX74 Uniprot:Q9NX74
Length = 493
Score = 187 (70.9 bits), Expect = 8.1e-14, P = 8.1e-14
Identities = 42/98 (42%), Positives = 62/98 (63%)
Query: 4 SGGSKE-IVDYGGILKFKADTNASSVMIARAAQDNCSIFSPTKGIQDIHQMIKEYLRYCV 62
+GGS + I Y I F+ T ASSVM+ARAA N SIF +G++ + +++++Y+RY V
Sbjct: 214 NGGSHDHIQQYSDIEDFRQATAASSVMVARAAMWNPSIFLK-EGLRPLEEVMQKYIRYAV 272
Query: 63 DYDNSAPNSKYCVQSMLGSQQESPLGKKFLESQTLEQI 100
YDN N+KYC+ ML Q ESP G+ +Q+ +I
Sbjct: 273 QYDNHYTNTKYCLCQMLREQLESPQGRLLHAAQSSREI 310
>UNIPROTKB|E1C4F6 [details] [associations]
symbol:DUS2L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003725 "double-stranded RNA binding" evidence=IEA]
[GO:0017150 "tRNA dihydrouridine synthase activity" evidence=IEA]
[GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001159
InterPro:IPR001269 InterPro:IPR013785 InterPro:IPR018517
Pfam:PF00035 Pfam:PF01207 PROSITE:PS01136 PROSITE:PS50137
SMART:SM00358 InterPro:IPR014720 GO:GO:0005739 Gene3D:3.20.20.70
GO:GO:0050660 Gene3D:3.30.160.20 GO:GO:0003725 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 OMA:YHNKLIL
GeneTree:ENSGT00550000075019 EMBL:AADN02038196 IPI:IPI00588517
ProteinModelPortal:E1C4F6 Ensembl:ENSGALT00000005388 Uniprot:E1C4F6
Length = 493
Score = 184 (69.8 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 42/98 (42%), Positives = 63/98 (64%)
Query: 4 SGGSKEIV-DYGGILKFKADTNASSVMIARAAQDNCSIFSPTKGIQDIHQMIKEYLRYCV 62
+GGS + + +YG I F+ T ASSVMIARAA N SIF +G + +++++Y++Y V
Sbjct: 216 NGGSHDFIKEYGDIETFQKATAASSVMIARAAMWNPSIFRK-EGPFPLRKVMQDYIKYAV 274
Query: 63 DYDNSAPNSKYCVQSMLGSQQESPLGKKFLESQTLEQI 100
YDN N+KYC+ ML Q E+ GKK +Q+ ++I
Sbjct: 275 RYDNHYTNTKYCLCQMLREQLETAQGKKLHVAQSTQEI 312
>UNIPROTKB|E2RKU2 [details] [associations]
symbol:DUS2L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA]
[GO:0017150 "tRNA dihydrouridine synthase activity" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA]
InterPro:IPR001159 InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF00035 Pfam:PF01207 PROSITE:PS01136
SMART:SM00358 InterPro:IPR014720 GO:GO:0005739 Gene3D:3.20.20.70
GO:GO:0050660 Gene3D:3.30.160.20 GO:GO:0003725 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 CTD:54920 KO:K05543 OMA:YHNKLIL
GeneTree:ENSGT00550000075019 EMBL:AAEX03004122 RefSeq:XP_546866.3
ProteinModelPortal:E2RKU2 Ensembl:ENSCAFT00000032371 GeneID:489746
KEGG:cfa:489746 NextBio:20862882 Uniprot:E2RKU2
Length = 493
Score = 180 (68.4 bits), Expect = 4.6e-13, P = 4.6e-13
Identities = 41/98 (41%), Positives = 63/98 (64%)
Query: 4 SGGSKE-IVDYGGILKFKADTNASSVMIARAAQDNCSIFSPTKGIQDIHQMIKEYLRYCV 62
+GGS + I Y I F+ T ASSVM+ARAA N SIF +G++ + +++++Y+RY V
Sbjct: 214 NGGSHDHIQKYLDIEDFRQATAASSVMVARAAMWNPSIFLK-EGLRPLEEVMQKYIRYAV 272
Query: 63 DYDNSAPNSKYCVQSMLGSQQESPLGKKFLESQTLEQI 100
Y+N N+KYC+ ML Q ESP G+ +Q+ ++I
Sbjct: 273 QYENHYTNTKYCLCQMLREQLESPQGRLLHAAQSSQEI 310
>UNIPROTKB|Q0VC60 [details] [associations]
symbol:DUS2L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0050660
"flavin adenine dinucleotide binding" evidence=IEA] [GO:0017150
"tRNA dihydrouridine synthase activity" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] InterPro:IPR001159
InterPro:IPR001269 InterPro:IPR013785 InterPro:IPR018517
Pfam:PF00035 Pfam:PF01207 PROSITE:PS01136 SMART:SM00358
InterPro:IPR014720 GO:GO:0005739 Gene3D:3.20.20.70 GO:GO:0050660
Gene3D:3.30.160.20 GO:GO:0003725 eggNOG:COG0042 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 CTD:54920 HOGENOM:HOG000195580
HOVERGEN:HBG079551 KO:K05543 OMA:YHNKLIL OrthoDB:EOG4MW85W
GeneTree:ENSGT00550000075019 EMBL:DAAA02046690 EMBL:BC120342
IPI:IPI00715355 RefSeq:NP_001068887.1 UniGene:Bt.15762 SMR:Q0VC60
STRING:Q0VC60 Ensembl:ENSBTAT00000019500 GeneID:509795
KEGG:bta:509795 InParanoid:Q0VC60 NextBio:20869132 Uniprot:Q0VC60
Length = 493
Score = 179 (68.1 bits), Expect = 6.0e-13, P = 6.0e-13
Identities = 42/98 (42%), Positives = 62/98 (63%)
Query: 4 SGGSKE-IVDYGGILKFKADTNASSVMIARAAQDNCSIFSPTKGIQDIHQMIKEYLRYCV 62
+GGS + I Y I F+ T ASSVM+ARAA N SIF +G + + +++++Y+RY V
Sbjct: 214 NGGSHDHIQGYLDIEDFRRATAASSVMVARAAMWNPSIFLK-EGPRPLEEVMQKYIRYAV 272
Query: 63 DYDNSAPNSKYCVQSMLGSQQESPLGKKFLESQTLEQI 100
YDN N+KYC+ ML Q ESP G+ +Q+ ++I
Sbjct: 273 QYDNHYTNTKYCLCQMLREQLESPQGRLLHAAQSSQEI 310
>MGI|MGI:1913619 [details] [associations]
symbol:Dus2l "dihydrouridine synthase 2-like (SMM1, S.
cerevisiae)" species:10090 "Mus musculus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0008033 "tRNA processing" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR001159
InterPro:IPR001269 InterPro:IPR013785 InterPro:IPR018517
Pfam:PF00035 Pfam:PF01207 PROSITE:PS01136 PROSITE:PS50137
SMART:SM00358 InterPro:IPR014720 MGI:MGI:1913619 GO:GO:0005783
GO:GO:0005739 Gene3D:3.20.20.70 GO:GO:0050660 Gene3D:3.30.160.20
GO:GO:0003725 eggNOG:COG0042 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 CTD:54920 HOGENOM:HOG000195580 HOVERGEN:HBG079551
KO:K05543 OMA:YHNKLIL OrthoDB:EOG4MW85W EMBL:AK009391 EMBL:BC058431
IPI:IPI00110119 RefSeq:NP_079794.1 UniGene:Mm.287500 PDB:1WHN
PDBsum:1WHN ProteinModelPortal:Q9D7B1 SMR:Q9D7B1 STRING:Q9D7B1
PhosphoSite:Q9D7B1 PaxDb:Q9D7B1 PRIDE:Q9D7B1
Ensembl:ENSMUST00000034375 GeneID:66369 KEGG:mmu:66369
GeneTree:ENSGT00550000075019 InParanoid:Q9D7B1
EvolutionaryTrace:Q9D7B1 NextBio:321469 Bgee:Q9D7B1
Genevestigator:Q9D7B1 GermOnline:ENSMUSG00000031901 Uniprot:Q9D7B1
Length = 493
Score = 179 (68.1 bits), Expect = 6.0e-13, P = 6.0e-13
Identities = 41/98 (41%), Positives = 62/98 (63%)
Query: 4 SGGSKE-IVDYGGILKFKADTNASSVMIARAAQDNCSIFSPTKGIQDIHQMIKEYLRYCV 62
+GGS + I + I F+ T ASSVM+ARAA N SIF G++ + +++++Y+RY V
Sbjct: 214 NGGSHDHIQQHVDIEDFRQATAASSVMVARAAMWNPSIFLKD-GLRPLEEVMQKYIRYAV 272
Query: 63 DYDNSAPNSKYCVQSMLGSQQESPLGKKFLESQTLEQI 100
YDN N+KYC+ ML Q ESP G+ +Q+ ++I
Sbjct: 273 QYDNHYTNTKYCLCQMLREQLESPQGRLLHAAQSSQEI 310
>RGD|1305612 [details] [associations]
symbol:Dus2l "dihydrouridine synthase 2-like, SMM1 homolog (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0017150 "tRNA dihydrouridine synthase activity" evidence=IEA]
[GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA]
InterPro:IPR001159 InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF00035 Pfam:PF01207 PROSITE:PS01136
PROSITE:PS50137 SMART:SM00358 InterPro:IPR014720 RGD:1305612
GO:GO:0005739 Gene3D:3.20.20.70 GO:GO:0050660 Gene3D:3.30.160.20
GO:GO:0003725 EMBL:CH473972 eggNOG:COG0042 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 CTD:54920 HOGENOM:HOG000195580
HOVERGEN:HBG079551 KO:K05543 OMA:YHNKLIL OrthoDB:EOG4MW85W
GeneTree:ENSGT00550000075019 EMBL:BC158728 IPI:IPI00363521
RefSeq:NP_001099651.1 UniGene:Rn.18304 SMR:B0BN89 STRING:B0BN89
Ensembl:ENSRNOT00000026827 GeneID:291978 KEGG:rno:291978
UCSC:RGD:1305612 NextBio:633545 Genevestigator:B0BN89
Uniprot:B0BN89
Length = 493
Score = 179 (68.1 bits), Expect = 6.0e-13, P = 6.0e-13
Identities = 41/98 (41%), Positives = 62/98 (63%)
Query: 4 SGGSKE-IVDYGGILKFKADTNASSVMIARAAQDNCSIFSPTKGIQDIHQMIKEYLRYCV 62
+GGS + I + I F+ T ASSVM+ARAA N SIF G++ + +++++Y+RY V
Sbjct: 214 NGGSHDHIQQHLDIEDFRQATAASSVMVARAAMWNPSIFLKD-GLRPLEEVMQKYIRYAV 272
Query: 63 DYDNSAPNSKYCVQSMLGSQQESPLGKKFLESQTLEQI 100
YDN N+KYC+ ML Q ESP G+ +Q+ ++I
Sbjct: 273 QYDNHYTNTKYCLCQMLREQLESPQGRMLHAAQSSQEI 310
>UNIPROTKB|I3LES5 [details] [associations]
symbol:DUS2L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0050660
"flavin adenine dinucleotide binding" evidence=IEA] [GO:0017150
"tRNA dihydrouridine synthase activity" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] InterPro:IPR001159
InterPro:IPR001269 InterPro:IPR013785 InterPro:IPR018517
Pfam:PF00035 Pfam:PF01207 PROSITE:PS01136 SMART:SM00358
InterPro:IPR014720 GO:GO:0005739 Gene3D:3.20.20.70 GO:GO:0050660
Gene3D:3.30.160.20 GO:GO:0003725 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 CTD:54920 KO:K05543 OMA:YHNKLIL
GeneTree:ENSGT00550000075019 EMBL:FP565347 RefSeq:XP_003355825.1
Ensembl:ENSSSCT00000028203 GeneID:100621573 KEGG:ssc:100621573
Uniprot:I3LES5
Length = 493
Score = 178 (67.7 bits), Expect = 7.6e-13, P = 7.6e-13
Identities = 41/98 (41%), Positives = 62/98 (63%)
Query: 4 SGGSKE-IVDYGGILKFKADTNASSVMIARAAQDNCSIFSPTKGIQDIHQMIKEYLRYCV 62
+GGS + I Y I F+ T ASSVM+ARAA N S+F +G + + +++++Y+RY V
Sbjct: 214 NGGSHDHIQKYLDIEDFRQATAASSVMVARAAMWNPSVFLK-EGPRPLEEVMQKYIRYAV 272
Query: 63 DYDNSAPNSKYCVQSMLGSQQESPLGKKFLESQTLEQI 100
YDN N+KYC+ ML Q ESP G+ +Q+ ++I
Sbjct: 273 QYDNHHTNTKYCLCQMLREQLESPQGRLLHAAQSSQEI 310
>TAIR|locus:2114713 [details] [associations]
symbol:AT3G49640 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006808 "regulation of nitrogen
utilization" evidence=ISS] [GO:0008033 "tRNA processing"
evidence=IEA] [GO:0017150 "tRNA dihydrouridine synthase activity"
evidence=IEA] [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136
EMBL:CP002686 Gene3D:3.20.20.70 GO:GO:0050660 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 KO:K05543 OMA:KEMIMHY
IPI:IPI00548775 RefSeq:NP_190533.3 UniGene:At.74022
ProteinModelPortal:F4IY04 SMR:F4IY04 PRIDE:F4IY04
EnsemblPlants:AT3G49640.1 GeneID:824126 KEGG:ath:AT3G49640
Uniprot:F4IY04
Length = 329
Score = 146 (56.5 bits), Expect = 9.8e-10, P = 9.8e-10
Identities = 33/94 (35%), Positives = 53/94 (56%)
Query: 9 EIVDYGGILKFKADTNASSVMIARAAQDNCSIFSPTKGIQDIHQMIKEYLRYCVDYDNSA 68
++++Y + K T A+SVM+AR A N SIFSP KG + K+YLR + ++N
Sbjct: 210 DVLEYDDFSRIKTATGAASVMVARGAMWNASIFSP-KGKSHWEDVKKKYLRKSILWNNDV 268
Query: 69 PNSKYCVQSMLGSQQ--ESPLGKKFLESQTLEQI 100
++KY ++ M+ E P GK ++ TLE +
Sbjct: 269 KSTKYTIKEMIAHHSCLELPEGKSINKADTLEDL 302
>WB|WBGene00013201 [details] [associations]
symbol:Y54E5A.6 species:6239 "Caenorhabditis elegans"
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0008033 "tRNA processing"
evidence=IEA] [GO:0017150 "tRNA dihydrouridine synthase activity"
evidence=IEA] [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF00035 Pfam:PF01207
PROSITE:PS01136 SMART:SM00358 InterPro:IPR014720 Gene3D:3.20.20.70
GO:GO:0050660 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
EMBL:AL032643 eggNOG:COG0042 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 HOGENOM:HOG000195580 KO:K05543
GeneTree:ENSGT00550000075019 OMA:TMTKYVV PIR:T27160
RefSeq:NP_493554.1 UniGene:Cel.16372 ProteinModelPortal:Q9XWJ9
SMR:Q9XWJ9 PaxDb:Q9XWJ9 EnsemblMetazoa:Y54E5A.6 GeneID:173331
KEGG:cel:CELE_Y54E5A.6 UCSC:Y54E5A.6 CTD:173331 WormBase:Y54E5A.6
InParanoid:Q9XWJ9 NextBio:879203 Uniprot:Q9XWJ9
Length = 436
Score = 136 (52.9 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 37/98 (37%), Positives = 52/98 (53%)
Query: 4 SGGSKEIVDYGGILKFKADTNASSVMIARAAQDNCSIFSPTKGIQDIHQMIKEYLRYCVD 63
+G S EI Y K++ T SS MIAR A SIF +G D ++ I+ +L
Sbjct: 209 NGLSDEIEQYSDFEKYQLLTETSSTMIARKALSTPSIFR-REGCLDKYEDIRNFLELACQ 267
Query: 64 YDNSAPNSKYCVQSMLGSQQE-SPLGKKFLESQTLEQI 100
YD S +KY VQ +LG+ QE P GK + + ++ QI
Sbjct: 268 YDESYTMTKYVVQRILGADQEYDPRGKATVAAGSVLQI 305
>DICTYBASE|DDB_G0283877 [details] [associations]
symbol:dus2l "tRNA-dihydrouridine synthase 2-like
protein" species:44689 "Dictyostelium discoideum" [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA;ISS] [GO:0008033
"tRNA processing" evidence=IEA;ISS] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0002943 "tRNA dihydrouridine synthesis"
evidence=IEA;ISS] [GO:0006400 "tRNA modification" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136
dictyBase:DDB_G0283877 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000153_GR Gene3D:3.20.20.70 GO:GO:0050660
EMBL:AAFI02000057 eggNOG:COG0042 GO:GO:0017150 PANTHER:PTHR11082
KO:K05543 RefSeq:XP_638879.1 ProteinModelPortal:Q54QJ2
EnsemblProtists:DDB0238070 GeneID:8624277 KEGG:ddi:DDB_G0283877
OMA:TMTKYVV ProtClustDB:CLSZ2430328 Uniprot:Q54QJ2
Length = 402
Score = 130 (50.8 bits), Expect = 8.3e-08, P = 8.3e-08
Identities = 33/98 (33%), Positives = 49/98 (50%)
Query: 9 EIVDYGGILKFKADTNASSVMIARAAQDNCSIFSPTKGIQDIHQMIKEYLRYCVDYDNSA 68
+I ++ I K K T S+MIAR N SIFS I D+ Q+I+EY +NS
Sbjct: 238 DIFEHADIEKIKKQTKVDSIMIARGVVKNVSIFSKPSPI-DLKQIIQEYTEIAYQTNNSP 296
Query: 69 PNSKYCVQSMLG-----SQQESPLGKKFLESQTLEQIW 101
N+KY + SML + +E+ + T+ +IW
Sbjct: 297 VNTKYVINSMLNENNITTNKEAKAMSSARDYDTITKIW 334
>POMBASE|SPBC1709.06 [details] [associations]
symbol:dus2 "tRNA dihydrouridine synthase Dus2
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006400 "tRNA modification" evidence=ISO] [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=ISO] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136
PomBase:SPBC1709.06 GO:GO:0005634 GO:GO:0005737 Gene3D:3.20.20.70
GO:GO:0050660 EMBL:CU329671 GenomeReviews:CU329671_GR
eggNOG:COG0042 GO:GO:0017150 PANTHER:PTHR11082 KO:K05543 PIR:T39634
RefSeq:NP_595439.1 ProteinModelPortal:O74731 STRING:O74731
EnsemblFungi:SPBC1709.06.1 GeneID:2540200 KEGG:spo:SPBC1709.06
OMA:LVERICD OrthoDB:EOG4PG98M NextBio:20801332 Uniprot:O74731
Length = 479
Score = 94 (38.1 bits), Expect = 0.00085, P = 0.00085
Identities = 24/74 (32%), Positives = 40/74 (54%)
Query: 9 EIVDYGGILKFKADTNASSVMIARAAQDNCSIFSPTKGIQDIHQMIKEYLRYCVDYDNSA 68
+++ Y L V+IARAA+ N S F +G ++ +E+L+ ++ DN+
Sbjct: 223 DVLSYNDGLDVIEKYGVDGVLIARAAERNVSCFR-IEGPLSSFKVAEEFLKMALEVDNNF 281
Query: 69 PNSKYCV-QSMLGS 81
N+KYC+ Q M GS
Sbjct: 282 GNTKYCLNQIMQGS 295
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.131 0.382 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 101 101 0.00091 102 3 11 23 0.43 30
29 0.47 31
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 14
No. of states in DFA: 555 (59 KB)
Total size of DFA: 113 KB (2075 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 11.10u 0.11s 11.21t Elapsed: 00:00:01
Total cpu time: 11.10u 0.11s 11.21t Elapsed: 00:00:01
Start: Thu Aug 15 15:53:38 2013 End: Thu Aug 15 15:53:39 2013