BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy4405
         (91 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|1KGD|A Chain A, Crystal Structure Of The Guanylate Kinase-Like Domain Of
          Human Cask
          Length = 180

 Score = 70.1 bits (170), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 30/56 (53%), Positives = 42/56 (75%)

Query: 6  RKTIALVGCQGVGRRTLKARLINSNPEKFAAVIPYTTRPMRELEENGQNYWFTSRE 61
          RKT+ L+G  GVGRR +K  LI  +P++FA  IP+TTRP ++ EENG+NY+F S +
Sbjct: 5  RKTLVLLGAHGVGRRHIKNTLITKHPDRFAYPIPHTTRPPKKDEENGKNYYFVSHD 60


>pdb|3NEY|A Chain A, Crystal Structure Of The Kinase Domain Of Mpp1P55
 pdb|3NEY|B Chain B, Crystal Structure Of The Kinase Domain Of Mpp1P55
 pdb|3NEY|C Chain C, Crystal Structure Of The Kinase Domain Of Mpp1P55
 pdb|3NEY|D Chain D, Crystal Structure Of The Kinase Domain Of Mpp1P55
 pdb|3NEY|F Chain F, Crystal Structure Of The Kinase Domain Of Mpp1P55
 pdb|3NEY|E Chain E, Crystal Structure Of The Kinase Domain Of Mpp1P55
          Length = 197

 Score = 65.9 bits (159), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 30/56 (53%), Positives = 39/56 (69%)

Query: 6  RKTIALVGCQGVGRRTLKARLINSNPEKFAAVIPYTTRPMRELEENGQNYWFTSRE 61
          RKT+ L+G  GVGR  +K  L++ NPEKF   +PYTTRP R+ EE+G+ Y F S E
Sbjct: 19 RKTLVLIGASGVGRSHIKNALLSQNPEKFVYPVPYTTRPPRKSEEDGKEYHFISTE 74


>pdb|1LVG|A Chain A, Crystal Structure Of Mouse Guanylate Kinase In Complex
          With Gmp And Adp
          Length = 198

 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 31/54 (57%)

Query: 9  IALVGCQGVGRRTLKARLINSNPEKFAAVIPYTTRPMRELEENGQNYWFTSREV 62
          + L G  G G+ TL  +L   +   F   + +TTR  R  EE+G++Y+F +RE+
Sbjct: 7  VVLSGPSGAGKSTLLKKLFQEHSSIFGFSVSHTTRNPRPGEEDGKDYYFVTREM 60


>pdb|3TVT|A Chain A, Structural Basis For Discs Large Interaction With Pins
          Length = 292

 Score = 42.4 bits (98), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 19/37 (51%), Positives = 28/37 (75%), Gaps = 1/37 (2%)

Query: 26  LINSNPEKFAAVIPYTTRPMRELEENGQNYWF-TSRE 61
           LI+  P+KF + +P+TTRP RE E +G++Y F +SRE
Sbjct: 117 LISEYPDKFGSCVPHTTRPKREYEVDGRDYHFVSSRE 153


>pdb|1JXM|A Chain A, Crystal Structure Of The Gmp Bound Sh3-Hook-Gk Fragment Of
           Psd-95
 pdb|1JXO|A Chain A, Crystal Structure Of The Sh3-Hook-Gk Fragment Of Psd-95
 pdb|1JXO|B Chain B, Crystal Structure Of The Sh3-Hook-Gk Fragment Of Psd-95
          Length = 301

 Score = 42.0 bits (97), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 18/37 (48%), Positives = 28/37 (75%), Gaps = 1/37 (2%)

Query: 26  LINSNPEKFAAVIPYTTRPMRELEENGQNYWF-TSRE 61
           L++  P+KF + +P+TTRP RE E +G++Y F +SRE
Sbjct: 128 LLSEFPDKFGSCVPHTTRPKREYEIDGRDYHFVSSRE 164


>pdb|3UAT|A Chain A, Guanylate Kinase Domains Of The Maguk Family Scaffold
           Proteins As Specific Phospho-Protein Binding Modules
          Length = 296

 Score = 42.0 bits (97), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 19/37 (51%), Positives = 28/37 (75%), Gaps = 1/37 (2%)

Query: 26  LINSNPEKFAAVIPYTTRPMRELEENGQNYWF-TSRE 61
           LI+  P+KF + +P+TTRP R+ E +G++Y F TSRE
Sbjct: 123 LISEFPDKFGSCVPHTTRPKRDYEVDGRDYHFVTSRE 159


>pdb|1KJW|A Chain A, Sh3-Guanylate Kinase Module From Psd-95
          Length = 295

 Score = 42.0 bits (97), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 18/37 (48%), Positives = 28/37 (75%), Gaps = 1/37 (2%)

Query: 26  LINSNPEKFAAVIPYTTRPMRELEENGQNYWF-TSRE 61
           L++  P+KF + +P+TTRP RE E +G++Y F +SRE
Sbjct: 122 LLSEFPDKFGSCVPHTTRPKREYEIDGRDYHFVSSRE 158


>pdb|2QOR|A Chain A, Crystal Structure Of Plasmodium Vivax Guanylate Kinase
          Length = 204

 Score = 42.0 bits (97), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 5/61 (8%)

Query: 1  MPPLKRKTIALVGCQGVGRRTLKARLINSNPEKFAAVIPYTTRPMRELEENGQNYWFTSR 60
          +PPL      + G  GVG+ TL  ++++  P +F   I  TTR  RE E NG +Y+F  +
Sbjct: 12 IPPL-----VVCGPSGVGKGTLIKKVLSEFPSRFRFSISCTTRNKREKETNGVDYYFVDK 66

Query: 61 E 61
          +
Sbjct: 67 D 67


>pdb|2J41|A Chain A, Crystal Structure Of Staphylococcus Aureus Guanylate
          Monophosphate Kinase
 pdb|2J41|B Chain B, Crystal Structure Of Staphylococcus Aureus Guanylate
          Monophosphate Kinase
 pdb|2J41|C Chain C, Crystal Structure Of Staphylococcus Aureus Guanylate
          Monophosphate Kinase
 pdb|2J41|D Chain D, Crystal Structure Of Staphylococcus Aureus Guanylate
          Monophosphate Kinase
          Length = 207

 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 30/53 (56%)

Query: 9  IALVGCQGVGRRTLKARLINSNPEKFAAVIPYTTRPMRELEENGQNYWFTSRE 61
          I L G  GVG+ T++ R+       +   I  TTR MRE E +G +Y+F +R+
Sbjct: 9  IVLSGPSGVGKGTVRKRIFEDPSTSYKYSISMTTRQMREGEVDGVDYFFKTRD 61


>pdb|3TAU|A Chain A, Crystal Structure Of A Putative Guanylate Monophosphaste
          Kinase From Listeria Monocytogenes Egd-E
 pdb|3TAU|B Chain B, Crystal Structure Of A Putative Guanylate Monophosphaste
          Kinase From Listeria Monocytogenes Egd-E
          Length = 208

 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/54 (40%), Positives = 30/54 (55%)

Query: 9  IALVGCQGVGRRTLKARLINSNPEKFAAVIPYTTRPMRELEENGQNYWFTSREV 62
          I L G  GVG+ T++  +       F   I  TTR  RE E++G +Y+F SREV
Sbjct: 11 IVLSGPSGVGKGTVREAVFKDPETSFDYSISXTTRLPREGEQDGVDYYFRSREV 64


>pdb|1Z6G|A Chain A, Crystal Structure Of Guanylate Kinase From Plasmodium
          Falciparum
          Length = 218

 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 30/54 (55%)

Query: 9  IALVGCQGVGRRTLKARLINSNPEKFAAVIPYTTRPMRELEENGQNYWFTSREV 62
          + + G  GVG+ TL  +L+N  P  F   +  TTR  RE E+ G +Y+F  + +
Sbjct: 26 LVICGPSGVGKGTLIKKLLNEFPNYFYFSVSCTTRKKREKEKEGVDYYFIDKTI 79


>pdb|2XKX|A Chain A, Single Particle Analysis Of Psd-95 In Negative Stain
 pdb|2XKX|B Chain B, Single Particle Analysis Of Psd-95 In Negative Stain
          Length = 721

 Score = 40.8 bits (94), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/37 (48%), Positives = 28/37 (75%), Gaps = 1/37 (2%)

Query: 26  LINSNPEKFAAVIPYTTRPMRELEENGQNYWF-TSRE 61
           L++  P+KF + +P+TTRP RE E +G++Y F +SRE
Sbjct: 548 LLSEFPDKFGSCVPHTTRPKREYEIDGRDYHFVSSRE 584


>pdb|4F4J|A Chain A, Conversion Of The Enzyme Guanylate Kinase Into A Mitotic
          Spindle Orienting Protein By A Single Mutation That
          Inhibits Gmp- Induced Closing
 pdb|4F4J|B Chain B, Conversion Of The Enzyme Guanylate Kinase Into A Mitotic
          Spindle Orienting Protein By A Single Mutation That
          Inhibits Gmp- Induced Closing
          Length = 202

 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 20/51 (39%), Positives = 27/51 (52%)

Query: 9  IALVGCQGVGRRTLKARLINSNPEKFAAVIPYTTRPMRELEENGQNYWFTS 59
          I + G  G G+ TL  +L    P+ F   +P TTR  R  E NG++Y F S
Sbjct: 20 IVISGPSGTGKSTLLKKLFAEYPDSFGFSVPSTTRTPRAGEVNGKDYNFVS 70


>pdb|3LNC|A Chain A, Crystal Structure Of Guanylate Kinase From Anaplasma
          Phagocytophilum
 pdb|3LNC|B Chain B, Crystal Structure Of Guanylate Kinase From Anaplasma
          Phagocytophilum
          Length = 231

 Score = 37.4 bits (85), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 17/63 (26%), Positives = 31/63 (49%)

Query: 16 GVGRRTLKARLINSNPEKFAAVIPYTTRPMRELEENGQNYWFTSREVNVGLAGTYIPMYH 75
          G G+ T+  +L+          +  TTR  R+ E+ G++Y+F  RE  + L      + H
Sbjct: 37 GCGKTTVANKLLEKQKNNIVKSVSVTTRAARKGEKEGKDYYFVDREEFLRLCSNGEIIEH 96

Query: 76 SEI 78
          +E+
Sbjct: 97 AEV 99


>pdb|1GKY|A Chain A, Refined Structure Of The Complex Between Guanylate
          Kinase And Its Substrate Gmp At 2.0 Angstroms
          Resolution
          Length = 187

 Score = 37.0 bits (84), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 19/51 (37%), Positives = 26/51 (50%)

Query: 9  IALVGCQGVGRRTLKARLINSNPEKFAAVIPYTTRPMRELEENGQNYWFTS 59
          I + G  G G+ TL  +L    P+ F   +  TTR  R  E NG++Y F S
Sbjct: 5  IVISGPSGTGKSTLLKKLFAEYPDSFGFSVSSTTRTPRAGEVNGKDYNFVS 55


>pdb|1EX6|A Chain A, Crystal Structure Of Unliganded Form Of Guanylate Kinase
          From Yeast
 pdb|1EX6|B Chain B, Crystal Structure Of Unliganded Form Of Guanylate Kinase
          From Yeast
 pdb|1EX7|A Chain A, Crystal Structure Of Yeast Guanylate Kinase In Complex
          With Guanosine-5'-Monophosphate
          Length = 186

 Score = 37.0 bits (84), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 19/51 (37%), Positives = 26/51 (50%)

Query: 9  IALVGCQGVGRRTLKARLINSNPEKFAAVIPYTTRPMRELEENGQNYWFTS 59
          I + G  G G+ TL  +L    P+ F   +  TTR  R  E NG++Y F S
Sbjct: 4  IVISGPSGTGKSTLLKKLFAEYPDSFGFSVSSTTRTPRAGEVNGKDYNFVS 54


>pdb|2V3C|C Chain C, Crystal Structure Of The Srp54-Srp19-7s.S Srp Rna Complex
           Of M. Jannaschii
 pdb|2V3C|D Chain D, Crystal Structure Of The Srp54-Srp19-7s.S Srp Rna Complex
           Of M. Jannaschii
          Length = 432

 Score = 32.0 bits (71), Expect = 0.083,   Method: Composition-based stats.
 Identities = 27/92 (29%), Positives = 38/92 (41%), Gaps = 25/92 (27%)

Query: 3   PLKRKTIALVGCQGVGRRTLKARL---INSNPEKFAAVIPYTTRP-----MRELEENGQN 54
           P K+  I LVG QG G+ T  A+L   I     K A +   T RP     +++L E    
Sbjct: 96  PKKQNVILLVGIQGSGKTTTAAKLARYIQKRGLKPALIAADTYRPAAYEQLKQLAEK--- 152

Query: 55  YWFTSREVNVGLAGTYIPMYHSEIRAYPPVEI 86
                          ++P+Y  E R   PV+I
Sbjct: 153 --------------IHVPIYGDETRTKSPVDI 170


>pdb|3NDB|B Chain B, Crystal Structure Of A Signal Sequence Bound To The Signal
           Recognition Particle
          Length = 454

 Score = 32.0 bits (71), Expect = 0.087,   Method: Composition-based stats.
 Identities = 27/92 (29%), Positives = 38/92 (41%), Gaps = 25/92 (27%)

Query: 3   PLKRKTIALVGCQGVGRRTLKARL---INSNPEKFAAVIPYTTRP-----MRELEENGQN 54
           P K+  I LVG QG G+ T  A+L   I     K A +   T RP     +++L E    
Sbjct: 96  PKKQNVILLVGIQGSGKTTTAAKLARYIQKRGLKPALIAADTYRPAAYEQLKQLAEK--- 152

Query: 55  YWFTSREVNVGLAGTYIPMYHSEIRAYPPVEI 86
                          ++P+Y  E R   PV+I
Sbjct: 153 --------------IHVPIYGDETRTKSPVDI 170


>pdb|4DJT|A Chain A, Crystal Structure Of A Nuclear Gtp-Binding Protein From
          Encephalitozoon Cuniculi Bound To Gdp-Mg2+
 pdb|4DJT|B Chain B, Crystal Structure Of A Nuclear Gtp-Binding Protein From
          Encephalitozoon Cuniculi Bound To Gdp-Mg2+
          Length = 218

 Score = 28.5 bits (62), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 5/56 (8%)

Query: 9  IALVGCQGVGRRTLKARLINSNPEK-FAAVIPYTTRPMRELEENGQ----NYWFTS 59
          I L+G  GVG+ T   R+++   EK + A +     P+  L++ G     N W T+
Sbjct: 14 ICLIGDGGVGKTTYINRVLDGRFEKNYNATVGAVNHPVTFLDDQGNVIKFNVWDTA 69


>pdb|4II2|A Chain A, Crystal Structure Of Ubiquitin Activating Enzyme 1 (uba1)
           In Complex With The Ub E2 Ubc4, Ubiquitin, And Atp/mg
 pdb|4II3|A Chain A, Crystal Structure Of S. Pombe Ubiquitin Activating Enzyme
           1 (uba1) In Complex With Ubiquitin And Atp/mg
 pdb|4II3|C Chain C, Crystal Structure Of S. Pombe Ubiquitin Activating Enzyme
           1 (uba1) In Complex With Ubiquitin And Atp/mg
          Length = 1001

 Score = 27.7 bits (60), Expect = 1.6,   Method: Composition-based stats.
 Identities = 20/86 (23%), Positives = 38/86 (44%), Gaps = 6/86 (6%)

Query: 1   MPPLKRKTIALVGCQGVGRRTLKARLINSNPEKFAAVIPYTTRPMRELEENGQNYWFTSR 60
           M  + +  + ++GC+G+G    K    N       +V  Y  +P R +E+    Y+ T  
Sbjct: 21  MKQMSQSNVLIIGCKGLGVEIAK----NVCLAGVKSVTLYDPQPTR-IEDLSSQYFLTED 75

Query: 61  EVNVGLAGTYIPMYHSEIRAYPPVEI 86
           ++ V  A   +    +E+  Y PV +
Sbjct: 76  DIGVPRAKVTVSKL-AELNQYVPVSV 100


>pdb|2DO8|A Chain A, Solution Structure Of Upf0301 Protein Hd_1794
          Length = 188

 Score = 25.8 bits (55), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 31  PEKFAAVIPYTT-RPMRELEENGQNYWFTSREVNVGLAGT 69
           PEKF   +  +T +P +  +E  QNYW  S   N  L  T
Sbjct: 122 PEKFIVCLGCSTWKPHQLEQEIAQNYWLLSEANNQTLFET 161


>pdb|3TR0|A Chain A, Structure Of Guanylate Kinase (Gmk) From Coxiella
          Burnetii
          Length = 205

 Score = 25.8 bits (55), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query: 16 GVGRRTLKARLINSNPEKFAAVIPYTTRPMRELEENGQNYWFTS 59
          G G+ +L   L+ +  E     I +TTRP R  ++ G +Y+F  
Sbjct: 17 GAGKTSLVRALVKALAE-IKISISHTTRPKRPGDQEGVDYFFID 59


>pdb|2AN9|A Chain A, Crystal Structure Of Oligomeric E.Coli Guanylate Kinase
          In Complex With Gdp
 pdb|2AN9|B Chain B, Crystal Structure Of Oligomeric E.Coli Guanylate Kinase
          In Complex With Gdp
 pdb|2ANB|A Chain A, Crystal Structure Of Oligomeric E.Coli Guanylate Kinase
          In Complex With Gmp
 pdb|2ANC|A Chain A, Crystal Structure Of Unliganded Form Of Oligomeric
          E.Coli Guanylate Kinase
 pdb|2ANC|B Chain B, Crystal Structure Of Unliganded Form Of Oligomeric
          E.Coli Guanylate Kinase
 pdb|2ANC|C Chain C, Crystal Structure Of Unliganded Form Of Oligomeric
          E.Coli Guanylate Kinase
 pdb|2ANC|D Chain D, Crystal Structure Of Unliganded Form Of Oligomeric
          E.Coli Guanylate Kinase
 pdb|2ANC|E Chain E, Crystal Structure Of Unliganded Form Of Oligomeric
          E.Coli Guanylate Kinase
 pdb|2ANC|F Chain F, Crystal Structure Of Unliganded Form Of Oligomeric
          E.Coli Guanylate Kinase
 pdb|2F3R|A Chain A, Crystal Structure Of E.Coli Guanylate Kinase In Complex
          With Ap5g
 pdb|2F3R|B Chain B, Crystal Structure Of E.Coli Guanylate Kinase In Complex
          With Ap5g
 pdb|2F3T|A Chain A, Crystal Structure Of E.Coli Guanylate Kinase In Complex
          With Ganciclovir Monophosphate
 pdb|2F3T|B Chain B, Crystal Structure Of E.Coli Guanylate Kinase In Complex
          With Ganciclovir Monophosphate
 pdb|2F3T|C Chain C, Crystal Structure Of E.Coli Guanylate Kinase In Complex
          With Ganciclovir Monophosphate
 pdb|2F3T|D Chain D, Crystal Structure Of E.Coli Guanylate Kinase In Complex
          With Ganciclovir Monophosphate
 pdb|2F3T|E Chain E, Crystal Structure Of E.Coli Guanylate Kinase In Complex
          With Ganciclovir Monophosphate
 pdb|2F3T|F Chain F, Crystal Structure Of E.Coli Guanylate Kinase In Complex
          With Ganciclovir Monophosphate
          Length = 207

 Score = 25.4 bits (54), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 1/47 (2%)

Query: 16 GVGRRTLKARLINSNPEKFAAV-IPYTTRPMRELEENGQNYWFTSRE 61
          G G+ +L   L+ + P     V + +TTR  R  E +G++Y+F + +
Sbjct: 14 GAGKSSLIQALLKTQPLYDTQVSVSHTTRQPRPGEVHGEHYFFVNHD 60


>pdb|1S96|A Chain A, The 2.0 A X-Ray Structure Of Guanylate Kinase From
          E.Coli
 pdb|1S96|B Chain B, The 2.0 A X-Ray Structure Of Guanylate Kinase From
          E.Coli
          Length = 219

 Score = 25.4 bits (54), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 1/47 (2%)

Query: 16 GVGRRTLKARLINSNPEKFAAV-IPYTTRPMRELEENGQNYWFTSRE 61
          G G+ +L   L+ + P     V + +TTR  R  E +G++Y+F + +
Sbjct: 26 GAGKSSLIQALLKTQPLYDTQVSVSHTTRQPRPGEVHGEHYFFVNHD 72


>pdb|2E87|A Chain A, Crystal Structure Of Hypothetical Gtp-Binding Protein
           Ph1320 From Pyrococcus Horikoshii Ot3, In Complex With
           Gdp
          Length = 357

 Score = 25.4 bits (54), Expect = 9.3,   Method: Composition-based stats.
 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 2/40 (5%)

Query: 4   LKRKTIALVGCQGVGRRTLKARLINSNPEKFAAVIPYTTR 43
           L+  T+ + G   VG+ TL   L  + PE   A  P+TTR
Sbjct: 165 LEIPTVVIAGHPNVGKSTLLKALTTAKPE--IASYPFTTR 202


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.319    0.136    0.411 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,699,112
Number of Sequences: 62578
Number of extensions: 96606
Number of successful extensions: 327
Number of sequences better than 100.0: 26
Number of HSP's better than 100.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 311
Number of HSP's gapped (non-prelim): 26
length of query: 91
length of database: 14,973,337
effective HSP length: 58
effective length of query: 33
effective length of database: 11,343,813
effective search space: 374345829
effective search space used: 374345829
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 45 (21.9 bits)