Query psy4405
Match_columns 91
No_of_seqs 137 out of 1117
Neff 8.9
Searched_HMMs 29240
Date Sat Aug 17 00:42:51 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4405.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4405hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ex7_A Guanylate kinase; subst 99.9 8.4E-26 2.9E-30 142.8 6.7 81 7-87 2-98 (186)
2 3ney_A 55 kDa erythrocyte memb 99.9 1.1E-24 3.8E-29 138.8 7.7 87 1-87 14-116 (197)
3 3tau_A Guanylate kinase, GMP k 99.8 6.2E-21 2.1E-25 121.4 8.3 82 5-86 7-104 (208)
4 1kgd_A CASK, peripheral plasma 99.8 6.4E-21 2.2E-25 118.9 7.5 84 3-86 2-101 (180)
5 3a00_A Guanylate kinase, GMP k 99.8 1.2E-20 4.2E-25 118.1 6.2 81 6-86 1-97 (186)
6 1kjw_A Postsynaptic density pr 99.8 1.2E-19 4E-24 121.5 6.1 83 2-87 101-200 (295)
7 1lvg_A Guanylate kinase, GMP k 99.8 1.5E-19 5.2E-24 114.4 6.0 84 1-86 1-100 (198)
8 3tvt_A Disks large 1 tumor sup 99.8 1.5E-19 5.1E-24 120.9 6.2 83 1-86 95-194 (292)
9 1s96_A Guanylate kinase, GMP k 99.8 2.7E-19 9.3E-24 115.2 7.2 84 1-86 13-113 (219)
10 2qor_A Guanylate kinase; phosp 99.8 1.2E-18 4.1E-23 110.3 7.3 82 5-86 11-108 (204)
11 2xkx_A Disks large homolog 4; 99.7 4.7E-17 1.6E-21 119.2 7.7 84 1-87 526-626 (721)
12 3tr0_A Guanylate kinase, GMP k 99.7 1.6E-16 5.4E-21 99.8 7.4 81 5-86 6-102 (205)
13 3lnc_A Guanylate kinase, GMP k 99.6 1.3E-16 4.6E-21 102.4 4.3 81 5-86 26-123 (231)
14 1z6g_A Guanylate kinase; struc 99.6 4.5E-15 1.6E-19 95.0 6.9 82 5-86 22-119 (218)
15 2j41_A Guanylate kinase; GMP, 99.6 8.6E-15 3E-19 91.8 7.5 84 4-87 4-103 (207)
16 3exa_A TRNA delta(2)-isopenten 99.6 6.9E-15 2.4E-19 99.3 6.4 81 6-86 3-97 (322)
17 3foz_A TRNA delta(2)-isopenten 99.5 5.3E-15 1.8E-19 99.7 5.6 82 5-86 9-104 (316)
18 1znw_A Guanylate kinase, GMP k 99.5 4.4E-14 1.5E-18 89.4 7.9 80 5-85 19-116 (207)
19 3eph_A TRNA isopentenyltransfe 99.4 2E-13 6.8E-18 94.7 5.9 81 6-86 2-96 (409)
20 3a8t_A Adenylate isopentenyltr 99.4 3.9E-13 1.3E-17 91.4 7.0 82 5-86 39-135 (339)
21 3crm_A TRNA delta(2)-isopenten 99.4 7.5E-13 2.6E-17 89.5 5.5 86 1-87 1-100 (323)
22 3tsz_A Tight junction protein 99.2 1.1E-11 3.6E-16 85.7 5.0 67 2-86 228-294 (391)
23 3shw_A Tight junction protein 99.2 9.2E-12 3.1E-16 87.7 3.8 67 2-86 220-286 (468)
24 3d3q_A TRNA delta(2)-isopenten 99.2 5.9E-11 2E-15 80.8 6.7 81 7-87 8-102 (340)
25 3rlf_A Maltose/maltodextrin im 99.0 4.8E-10 1.6E-14 77.3 6.5 28 5-32 28-55 (381)
26 3tif_A Uncharacterized ABC tra 99.0 1.6E-10 5.4E-15 74.8 3.9 28 5-32 30-57 (235)
27 2ze6_A Isopentenyl transferase 99.0 2.5E-10 8.5E-15 74.4 4.9 80 7-87 2-96 (253)
28 2pcj_A ABC transporter, lipopr 99.0 2.1E-10 7.1E-15 73.8 3.6 28 5-32 29-56 (224)
29 3asz_A Uridine kinase; cytidin 99.0 1.7E-10 5.7E-15 72.6 3.1 31 1-31 1-31 (211)
30 3gfo_A Cobalt import ATP-bindi 99.0 2.6E-10 8.8E-15 75.5 3.8 28 5-32 33-60 (275)
31 1b0u_A Histidine permease; ABC 99.0 3E-10 1E-14 74.6 4.0 28 5-32 31-58 (262)
32 4g1u_C Hemin import ATP-bindin 99.0 2.9E-10 9.7E-15 74.9 3.7 28 5-32 36-63 (266)
33 1g6h_A High-affinity branched- 99.0 3.1E-10 1E-14 74.3 3.8 28 5-32 32-59 (257)
34 2olj_A Amino acid ABC transpor 99.0 3.7E-10 1.3E-14 74.3 4.0 28 5-32 49-76 (263)
35 1ji0_A ABC transporter; ATP bi 99.0 3.5E-10 1.2E-14 73.4 3.8 28 5-32 31-58 (240)
36 1zp6_A Hypothetical protein AT 99.0 3.9E-10 1.3E-14 69.8 3.8 28 3-30 6-33 (191)
37 4eun_A Thermoresistant glucoki 99.0 3.2E-10 1.1E-14 71.1 3.3 30 1-30 24-53 (200)
38 1vpl_A ABC transporter, ATP-bi 99.0 4.2E-10 1.4E-14 73.8 4.0 28 5-32 40-67 (256)
39 2pze_A Cystic fibrosis transme 99.0 4.2E-10 1.4E-14 72.5 3.8 28 5-32 33-60 (229)
40 1htw_A HI0065; nucleotide-bind 99.0 4.8E-10 1.6E-14 68.8 3.9 27 5-31 32-58 (158)
41 1sgw_A Putative ABC transporte 99.0 3.5E-10 1.2E-14 72.4 3.4 28 5-32 34-61 (214)
42 2ff7_A Alpha-hemolysin translo 99.0 4.4E-10 1.5E-14 73.3 3.8 28 5-32 34-61 (247)
43 1v43_A Sugar-binding transport 99.0 1.6E-09 5.5E-14 74.4 6.7 28 5-32 36-63 (372)
44 2ihy_A ABC transporter, ATP-bi 99.0 4.7E-10 1.6E-14 74.4 3.8 28 5-32 46-73 (279)
45 2qi9_C Vitamin B12 import ATP- 98.9 5.1E-10 1.7E-14 73.1 3.8 29 5-33 25-53 (249)
46 1mv5_A LMRA, multidrug resista 98.9 6.3E-10 2.2E-14 72.2 4.2 28 5-32 27-54 (243)
47 1gvn_B Zeta; postsegregational 98.9 2.6E-10 9E-15 75.6 2.4 82 4-87 31-116 (287)
48 1z47_A CYSA, putative ABC-tran 98.9 1E-09 3.5E-14 75.1 5.2 28 5-32 40-67 (355)
49 2ixe_A Antigen peptide transpo 98.9 5.9E-10 2E-14 73.5 3.9 28 5-32 44-71 (271)
50 2yz2_A Putative ABC transporte 98.9 6E-10 2.1E-14 73.3 3.8 28 5-32 32-59 (266)
51 2yyz_A Sugar ABC transporter, 98.9 1.1E-09 3.9E-14 74.9 5.2 28 5-32 28-55 (359)
52 2cbz_A Multidrug resistance-as 98.9 5E-10 1.7E-14 72.5 3.3 28 5-32 30-57 (237)
53 2nq2_C Hypothetical ABC transp 98.9 6.3E-10 2.1E-14 72.8 3.8 28 5-32 30-57 (253)
54 3fvq_A Fe(3+) IONS import ATP- 98.9 7.3E-10 2.5E-14 75.9 4.0 28 5-32 29-56 (359)
55 2ghi_A Transport protein; mult 98.9 7.5E-10 2.6E-14 72.6 3.8 28 5-32 45-72 (260)
56 2it1_A 362AA long hypothetical 98.9 1.4E-09 4.8E-14 74.5 5.2 28 5-32 28-55 (362)
57 3c8u_A Fructokinase; YP_612366 98.9 6.2E-10 2.1E-14 70.3 3.2 28 4-31 20-47 (208)
58 3tui_C Methionine import ATP-b 98.9 1.1E-09 3.6E-14 75.3 4.3 28 5-32 53-80 (366)
59 1qhx_A CPT, protein (chloramph 98.9 1.1E-09 3.9E-14 67.0 4.0 26 6-31 3-28 (178)
60 2zu0_C Probable ATP-dependent 98.9 1.2E-09 4.1E-14 71.9 3.9 26 5-30 45-70 (267)
61 2d2e_A SUFC protein; ABC-ATPas 98.9 1.1E-09 3.9E-14 71.3 3.7 25 5-29 28-52 (250)
62 2onk_A Molybdate/tungstate ABC 98.9 1.4E-09 4.9E-14 70.6 4.1 26 7-32 25-50 (240)
63 1g29_1 MALK, maltose transport 98.9 1.4E-09 4.8E-14 74.7 4.1 28 5-32 28-55 (372)
64 4gp7_A Metallophosphoesterase; 98.9 1.4E-09 4.8E-14 66.9 3.6 21 5-25 8-28 (171)
65 2bbs_A Cystic fibrosis transme 98.9 1.3E-09 4.5E-14 72.6 3.6 28 5-32 63-90 (290)
66 3ozx_A RNAse L inhibitor; ATP 98.9 1.7E-09 5.8E-14 77.3 4.3 28 5-32 24-51 (538)
67 3d31_A Sulfate/molybdate ABC t 98.9 1.2E-09 4E-14 74.6 3.1 28 5-32 25-52 (348)
68 1knq_A Gluconate kinase; ALFA/ 98.8 2.7E-09 9.2E-14 65.3 4.4 29 2-30 4-32 (175)
69 3b85_A Phosphate starvation-in 98.8 1.3E-09 4.5E-14 69.5 2.9 26 5-31 21-46 (208)
70 3nh6_A ATP-binding cassette SU 98.8 1.3E-09 4.3E-14 73.2 2.7 28 5-32 79-106 (306)
71 1oxx_K GLCV, glucose, ABC tran 98.8 1.1E-09 3.7E-14 74.8 2.3 28 5-32 30-57 (353)
72 1kag_A SKI, shikimate kinase I 98.8 2.7E-09 9.2E-14 65.0 3.7 26 6-31 4-29 (173)
73 2bdt_A BH3686; alpha-beta prot 98.8 2.6E-09 8.9E-14 66.1 3.4 26 6-31 2-27 (189)
74 2pjz_A Hypothetical protein ST 98.8 2.5E-09 8.5E-14 70.4 3.4 25 6-30 30-54 (263)
75 3gd7_A Fusion complex of cysti 98.8 2.8E-09 9.6E-14 73.6 3.8 27 5-31 46-72 (390)
76 3uie_A Adenylyl-sulfate kinase 98.8 2.6E-09 8.8E-14 67.0 3.2 27 5-31 24-50 (200)
77 2ehv_A Hypothetical protein PH 98.8 3.6E-09 1.2E-13 67.6 3.8 23 5-27 29-51 (251)
78 3aez_A Pantothenate kinase; tr 98.8 2.6E-09 9E-14 71.7 3.3 28 4-31 88-115 (312)
79 2v9p_A Replication protein E1; 98.8 2.9E-09 1E-13 71.5 3.4 26 5-30 125-150 (305)
80 4a74_A DNA repair and recombin 98.8 3.9E-09 1.3E-13 66.7 3.7 26 5-30 24-49 (231)
81 2jeo_A Uridine-cytidine kinase 98.8 3E-09 1E-13 68.7 3.3 27 5-31 24-50 (245)
82 3j16_B RLI1P; ribosome recycli 98.8 5.6E-09 1.9E-13 75.6 4.6 28 5-32 102-129 (608)
83 1ye8_A Protein THEP1, hypothet 98.8 3.8E-09 1.3E-13 65.7 3.0 24 8-31 2-25 (178)
84 1yqt_A RNAse L inhibitor; ATP- 98.8 6.4E-09 2.2E-13 74.3 4.5 28 5-32 46-73 (538)
85 2eyu_A Twitching motility prot 98.8 4.2E-09 1.4E-13 69.1 3.2 27 5-31 24-50 (261)
86 2i3b_A HCR-ntpase, human cance 98.7 4.2E-09 1.4E-13 66.2 2.7 26 6-31 1-26 (189)
87 1sq5_A Pantothenate kinase; P- 98.7 6.1E-09 2.1E-13 69.5 3.5 28 4-31 78-105 (308)
88 4e22_A Cytidylate kinase; P-lo 98.7 1.1E-08 3.9E-13 66.4 4.4 26 5-30 26-51 (252)
89 2bbw_A Adenylate kinase 4, AK4 98.7 8.6E-09 2.9E-13 66.4 3.3 26 5-30 26-51 (246)
90 3b9q_A Chloroplast SRP recepto 98.7 8.1E-09 2.8E-13 69.1 3.2 27 5-31 99-125 (302)
91 3bk7_A ABC transporter ATP-bin 98.7 1.1E-08 3.9E-13 74.0 4.2 29 4-32 115-143 (607)
92 1rj9_A FTSY, signal recognitio 98.7 1E-08 3.5E-13 68.7 3.7 28 5-32 101-128 (304)
93 3vaa_A Shikimate kinase, SK; s 98.7 1E-08 3.5E-13 64.2 3.3 27 5-31 24-50 (199)
94 3ozx_A RNAse L inhibitor; ATP 98.7 1.2E-08 4.2E-13 72.9 4.1 28 5-32 293-320 (538)
95 1yqt_A RNAse L inhibitor; ATP- 98.7 1.6E-08 5.4E-13 72.2 4.4 28 5-32 311-338 (538)
96 3bk7_A ABC transporter ATP-bin 98.7 1.6E-08 5.6E-13 73.1 4.4 28 5-32 381-408 (607)
97 2gza_A Type IV secretion syste 98.7 1.2E-08 4.2E-13 69.6 3.4 28 5-32 174-201 (361)
98 1nn5_A Similar to deoxythymidy 98.7 1.3E-08 4.5E-13 63.7 3.2 31 1-31 4-34 (215)
99 1rz3_A Hypothetical protein rb 98.7 1.6E-08 5.4E-13 63.5 3.6 28 3-30 19-46 (201)
100 2npi_A Protein CLP1; CLP1-PCF1 98.7 1.2E-08 4.2E-13 71.7 3.3 27 5-31 137-163 (460)
101 2rcn_A Probable GTPase ENGC; Y 98.7 3.4E-08 1.2E-12 67.6 5.4 27 5-31 214-240 (358)
102 2vp4_A Deoxynucleoside kinase; 98.7 1.3E-08 4.5E-13 65.1 3.2 26 4-29 18-43 (230)
103 3e70_C DPA, signal recognition 98.7 1.5E-08 5.2E-13 68.5 3.6 28 4-31 127-154 (328)
104 1y63_A LMAJ004144AAA protein; 98.6 2.6E-08 8.8E-13 61.7 4.3 29 1-29 5-33 (184)
105 1cke_A CK, MSSA, protein (cyti 98.6 1.8E-08 6.1E-13 63.7 3.5 25 6-30 5-29 (227)
106 3b60_A Lipid A export ATP-bind 98.6 1.8E-08 6.2E-13 72.3 3.9 28 5-32 368-395 (582)
107 2yv5_A YJEQ protein; hydrolase 98.6 4.3E-08 1.5E-12 65.4 5.4 26 5-31 164-189 (302)
108 3b5x_A Lipid A export ATP-bind 98.6 2E-08 6.7E-13 72.1 3.9 28 5-32 368-395 (582)
109 3j16_B RLI1P; ribosome recycli 98.6 2.1E-08 7.2E-13 72.6 4.1 28 5-32 377-404 (608)
110 1lw7_A Transcriptional regulat 98.6 1.9E-08 6.6E-13 68.3 3.5 27 6-32 170-196 (365)
111 2og2_A Putative signal recogni 98.6 1.8E-08 6.1E-13 69.0 3.2 27 5-31 156-182 (359)
112 3sop_A Neuronal-specific septi 98.6 2.2E-08 7.5E-13 66.0 3.3 24 8-31 4-27 (270)
113 2yl4_A ATP-binding cassette SU 98.6 1.7E-08 5.8E-13 72.6 3.0 28 5-32 369-396 (595)
114 2pt7_A CAG-ALFA; ATPase, prote 98.6 2E-08 6.7E-13 67.9 3.0 28 5-32 170-197 (330)
115 2obl_A ESCN; ATPase, hydrolase 98.6 3.4E-08 1.2E-12 67.2 3.9 29 4-32 69-97 (347)
116 3t61_A Gluconokinase; PSI-biol 98.6 2.6E-08 9E-13 62.2 3.1 26 6-31 18-43 (202)
117 4a82_A Cystic fibrosis transme 98.6 1.6E-08 5.5E-13 72.5 2.4 28 5-32 366-393 (578)
118 3qf4_B Uncharacterized ABC tra 98.6 2.4E-08 8.1E-13 72.0 3.1 28 5-32 380-407 (598)
119 2qt1_A Nicotinamide riboside k 98.6 3.8E-08 1.3E-12 61.7 3.7 27 5-31 20-46 (207)
120 3zvl_A Bifunctional polynucleo 98.6 1.4E-07 4.8E-12 65.3 6.8 26 5-30 257-282 (416)
121 2yhs_A FTSY, cell division pro 98.6 2.8E-08 9.6E-13 70.6 3.3 27 5-31 292-318 (503)
122 3qf4_A ABC transporter, ATP-bi 98.6 3E-08 1E-12 71.3 3.3 28 5-32 368-395 (587)
123 1u0l_A Probable GTPase ENGC; p 98.6 4E-08 1.4E-12 65.4 3.6 28 5-32 168-195 (301)
124 3ec2_A DNA replication protein 98.6 3.3E-08 1.1E-12 60.7 3.0 26 5-30 37-62 (180)
125 2rhm_A Putative kinase; P-loop 98.6 4.2E-08 1.4E-12 60.5 3.3 27 5-31 4-30 (193)
126 3kb2_A SPBC2 prophage-derived 98.6 3.9E-08 1.3E-12 59.5 3.1 25 7-31 2-26 (173)
127 2dpy_A FLII, flagellum-specifi 98.6 5.7E-08 1.9E-12 68.0 4.2 30 3-32 154-183 (438)
128 1qf9_A UMP/CMP kinase, protein 98.5 5.7E-08 2E-12 59.6 3.8 31 1-31 1-31 (194)
129 3trf_A Shikimate kinase, SK; a 98.5 4.6E-08 1.6E-12 60.1 3.1 27 5-31 4-30 (185)
130 2w0m_A SSO2452; RECA, SSPF, un 98.5 6.5E-08 2.2E-12 60.8 3.8 26 5-30 22-47 (235)
131 3cm0_A Adenylate kinase; ATP-b 98.5 4.3E-08 1.5E-12 60.2 2.9 26 5-30 3-28 (186)
132 2qag_B Septin-6, protein NEDD5 98.5 4.3E-08 1.5E-12 68.5 3.1 26 5-30 39-66 (427)
133 2ewv_A Twitching motility prot 98.5 4.4E-08 1.5E-12 67.1 3.2 27 5-31 135-161 (372)
134 1t9h_A YLOQ, probable GTPase E 98.5 1.3E-08 4.5E-13 68.4 0.5 27 5-31 172-198 (307)
135 1tq4_A IIGP1, interferon-induc 98.5 6.4E-08 2.2E-12 67.3 3.7 24 8-31 71-94 (413)
136 2pez_A Bifunctional 3'-phospho 98.5 6.2E-08 2.1E-12 59.5 3.3 26 5-30 4-29 (179)
137 3jvv_A Twitching mobility prot 98.5 6.7E-08 2.3E-12 66.0 3.8 27 5-31 122-148 (356)
138 1ly1_A Polynucleotide kinase; 98.5 6.9E-08 2.4E-12 58.8 3.5 22 7-28 3-24 (181)
139 2kjq_A DNAA-related protein; s 98.5 4.7E-08 1.6E-12 59.1 2.7 27 5-31 35-61 (149)
140 1kht_A Adenylate kinase; phosp 98.5 6.1E-08 2.1E-12 59.5 3.1 26 6-31 3-28 (192)
141 1p9r_A General secretion pathw 98.5 6E-08 2.1E-12 67.5 3.3 28 5-32 166-193 (418)
142 3tqc_A Pantothenate kinase; bi 98.5 7.9E-08 2.7E-12 64.9 3.7 26 6-31 92-117 (321)
143 2oap_1 GSPE-2, type II secreti 98.5 6.5E-08 2.2E-12 68.8 3.5 28 5-32 259-286 (511)
144 3euj_A Chromosome partition pr 98.5 6.2E-08 2.1E-12 68.6 3.3 26 7-32 30-55 (483)
145 4f4c_A Multidrug resistance pr 98.5 8.1E-08 2.8E-12 74.4 4.2 28 5-32 1104-1131(1321)
146 3kta_A Chromosome segregation 98.5 1.1E-07 3.8E-12 58.3 4.0 24 8-31 28-51 (182)
147 4f4c_A Multidrug resistance pr 98.5 5.2E-08 1.8E-12 75.5 3.0 28 5-32 443-470 (1321)
148 1pui_A ENGB, probable GTP-bind 98.5 3.8E-08 1.3E-12 61.3 1.8 29 2-30 22-50 (210)
149 1ukz_A Uridylate kinase; trans 98.5 1.4E-07 4.7E-12 58.8 4.4 28 4-31 13-40 (203)
150 1odf_A YGR205W, hypothetical 3 98.5 8.8E-08 3E-12 63.7 3.7 27 5-31 30-56 (290)
151 2qm8_A GTPase/ATPase; G protei 98.5 9.5E-08 3.2E-12 64.7 3.9 26 5-30 54-79 (337)
152 2v54_A DTMP kinase, thymidylat 98.5 1.4E-07 4.7E-12 58.6 4.3 27 5-31 3-29 (204)
153 2iw3_A Elongation factor 3A; a 98.5 4.3E-08 1.5E-12 74.2 2.2 28 5-32 698-725 (986)
154 3iij_A Coilin-interacting nucl 98.5 9.9E-08 3.4E-12 58.5 3.4 27 5-31 10-36 (180)
155 1jjv_A Dephospho-COA kinase; P 98.5 1E-07 3.5E-12 59.6 3.4 22 7-28 3-24 (206)
156 2wwf_A Thymidilate kinase, put 98.5 1E-07 3.6E-12 59.5 3.4 27 5-31 9-35 (212)
157 1cr0_A DNA primase/helicase; R 98.5 1.1E-07 3.6E-12 62.7 3.6 27 5-31 34-60 (296)
158 2f1r_A Molybdopterin-guanine d 98.5 3E-08 1E-12 61.5 0.9 25 7-31 3-27 (171)
159 3nwj_A ATSK2; P loop, shikimat 98.4 9.3E-08 3.2E-12 62.5 2.8 27 5-31 47-73 (250)
160 2plr_A DTMP kinase, probable t 98.4 1.3E-07 4.6E-12 58.8 3.4 27 5-31 3-29 (213)
161 3lw7_A Adenylate kinase relate 98.4 1.6E-07 5.4E-12 56.5 3.6 24 7-31 2-25 (179)
162 2iw3_A Elongation factor 3A; a 98.4 1.3E-07 4.6E-12 71.6 3.8 24 5-28 460-483 (986)
163 2yvu_A Probable adenylyl-sulfa 98.4 1.7E-07 6E-12 57.7 3.7 27 5-31 12-38 (186)
164 3v9p_A DTMP kinase, thymidylat 98.4 1.2E-08 3.9E-13 66.0 -1.7 83 5-89 24-120 (227)
165 2if2_A Dephospho-COA kinase; a 98.4 1.5E-07 5.1E-12 58.7 3.4 22 7-28 2-23 (204)
166 1n0w_A DNA repair protein RAD5 98.4 1.9E-07 6.4E-12 59.3 3.8 25 5-29 23-47 (243)
167 2c95_A Adenylate kinase 1; tra 98.4 1.1E-07 3.8E-12 58.6 2.7 27 5-31 8-34 (196)
168 2vli_A Antibiotic resistance p 98.4 1.2E-07 4E-12 58.0 2.7 27 5-31 4-30 (183)
169 2p5t_B PEZT; postsegregational 98.4 1.6E-07 5.3E-12 60.9 3.3 27 5-31 31-57 (253)
170 4eaq_A DTMP kinase, thymidylat 98.4 2.3E-07 8E-12 59.6 3.8 27 5-31 25-51 (229)
171 2x8a_A Nuclear valosin-contain 98.4 2.4E-07 8.3E-12 60.9 4.0 23 9-31 47-69 (274)
172 1tev_A UMP-CMP kinase; ploop, 98.4 1.8E-07 6.1E-12 57.5 3.1 26 6-31 3-28 (196)
173 2cvh_A DNA repair and recombin 98.4 2.7E-07 9.1E-12 57.8 3.9 24 5-28 19-42 (220)
174 3umf_A Adenylate kinase; rossm 98.4 1.8E-07 6.2E-12 60.0 3.2 27 5-31 28-54 (217)
175 1uf9_A TT1252 protein; P-loop, 98.4 2.6E-07 8.9E-12 57.3 3.8 25 5-29 7-31 (203)
176 1m7g_A Adenylylsulfate kinase; 98.4 1.9E-07 6.4E-12 58.8 3.2 27 5-31 24-50 (211)
177 1nks_A Adenylate kinase; therm 98.4 1.7E-07 5.6E-12 57.5 2.8 25 7-31 2-26 (194)
178 3ux8_A Excinuclease ABC, A sub 98.4 1E-07 3.5E-12 69.3 2.2 23 5-27 347-369 (670)
179 2cdn_A Adenylate kinase; phosp 98.4 2.6E-07 8.9E-12 57.6 3.7 28 4-31 18-45 (201)
180 3cr8_A Sulfate adenylyltranfer 98.4 9E-08 3.1E-12 68.7 1.8 27 5-31 368-394 (552)
181 1nij_A Hypothetical protein YJ 98.4 1.7E-07 5.7E-12 62.9 2.9 25 6-30 4-28 (318)
182 1uj2_A Uridine-cytidine kinase 98.4 3.2E-07 1.1E-11 59.3 4.1 27 5-31 21-47 (252)
183 1oix_A RAS-related protein RAB 98.4 2.6E-07 9E-12 57.2 3.5 24 8-31 31-54 (191)
184 1f2t_A RAD50 ABC-ATPase; DNA d 98.4 3.6E-07 1.2E-11 55.2 3.9 23 6-28 23-45 (149)
185 1via_A Shikimate kinase; struc 98.4 1.8E-07 6.2E-12 57.2 2.6 24 8-31 6-29 (175)
186 3r20_A Cytidylate kinase; stru 98.4 2.3E-07 7.8E-12 60.2 3.2 26 6-31 9-34 (233)
187 2iyv_A Shikimate kinase, SK; t 98.4 2E-07 6.9E-12 57.3 2.7 25 7-31 3-27 (184)
188 3ux8_A Excinuclease ABC, A sub 98.3 2.2E-07 7.6E-12 67.6 3.1 19 5-23 43-61 (670)
189 3g5u_A MCG1178, multidrug resi 98.3 3.8E-07 1.3E-11 70.6 4.5 28 5-32 1058-1085(1284)
190 2f9l_A RAB11B, member RAS onco 98.3 2.9E-07 1E-11 57.1 3.2 23 8-30 7-29 (199)
191 1zd8_A GTP:AMP phosphotransfer 98.3 3.5E-07 1.2E-11 58.1 3.7 27 5-31 6-32 (227)
192 2px0_A Flagellar biosynthesis 98.3 2.5E-07 8.7E-12 61.6 3.1 27 5-31 104-130 (296)
193 3g5u_A MCG1178, multidrug resi 98.3 2.5E-07 8.4E-12 71.6 3.4 28 5-32 415-442 (1284)
194 1tf7_A KAIC; homohexamer, hexa 98.3 3E-07 1E-11 65.2 3.6 27 5-31 38-66 (525)
195 2jaq_A Deoxyguanosine kinase; 98.3 2.9E-07 9.9E-12 57.0 3.1 24 8-31 2-25 (205)
196 2bwj_A Adenylate kinase 5; pho 98.3 2.8E-07 9.5E-12 57.0 3.0 26 6-31 12-37 (199)
197 1nlf_A Regulatory protein REPA 98.3 3.5E-07 1.2E-11 59.9 3.6 26 5-30 29-54 (279)
198 1zak_A Adenylate kinase; ATP:A 98.3 2.6E-07 8.9E-12 58.5 2.8 27 5-31 4-30 (222)
199 1gtv_A TMK, thymidylate kinase 98.3 9.5E-08 3.2E-12 59.8 0.6 25 7-31 1-25 (214)
200 3tlx_A Adenylate kinase 2; str 98.3 3.7E-07 1.3E-11 59.0 3.3 27 5-31 28-54 (243)
201 1svm_A Large T antigen; AAA+ f 98.3 4.6E-07 1.6E-11 62.3 3.9 27 5-31 168-194 (377)
202 1wb9_A DNA mismatch repair pro 98.3 4.2E-07 1.4E-11 67.6 3.8 26 5-30 606-631 (800)
203 1np6_A Molybdopterin-guanine d 98.3 5.3E-07 1.8E-11 56.0 3.6 26 6-31 6-31 (174)
204 1vht_A Dephospho-COA kinase; s 98.3 6.3E-07 2.2E-11 56.5 4.0 24 5-28 3-26 (218)
205 1aky_A Adenylate kinase; ATP:A 98.3 4.6E-07 1.6E-11 57.2 3.3 27 5-31 3-29 (220)
206 3ld9_A DTMP kinase, thymidylat 98.3 2.8E-07 9.5E-12 59.4 2.3 45 2-46 17-61 (223)
207 1vma_A Cell division protein F 98.3 4.3E-07 1.5E-11 60.9 3.2 27 5-31 103-129 (306)
208 1pzn_A RAD51, DNA repair and r 98.3 5.4E-07 1.9E-11 61.2 3.7 26 5-30 130-155 (349)
209 1ewq_A DNA mismatch repair pro 98.3 4.8E-07 1.6E-11 67.1 3.7 25 6-30 576-600 (765)
210 1q3t_A Cytidylate kinase; nucl 98.3 5E-07 1.7E-11 57.8 3.4 27 4-30 14-40 (236)
211 4aby_A DNA repair protein RECN 98.3 1.3E-07 4.6E-12 64.7 0.7 26 5-31 60-85 (415)
212 3ake_A Cytidylate kinase; CMP 98.3 5.6E-07 1.9E-11 55.9 3.5 24 8-31 4-27 (208)
213 3dl0_A Adenylate kinase; phosp 98.3 6.3E-07 2.2E-11 56.3 3.6 24 8-31 2-25 (216)
214 1ltq_A Polynucleotide kinase; 98.3 7.5E-07 2.6E-11 58.5 4.0 24 7-30 3-26 (301)
215 1a7j_A Phosphoribulokinase; tr 98.3 2.2E-07 7.5E-12 61.7 1.4 26 5-30 4-29 (290)
216 3qf7_A RAD50; ABC-ATPase, ATPa 98.3 7.2E-07 2.5E-11 60.9 3.9 23 8-30 25-47 (365)
217 3fb4_A Adenylate kinase; psych 98.3 5E-07 1.7E-11 56.7 3.0 24 8-31 2-25 (216)
218 3kfv_A Tight junction protein 98.3 1.5E-06 5E-11 58.5 5.3 63 2-86 141-203 (308)
219 1in4_A RUVB, holliday junction 98.3 6E-07 2.1E-11 60.3 3.4 25 7-31 52-76 (334)
220 3a4m_A L-seryl-tRNA(SEC) kinas 98.3 7.9E-07 2.7E-11 57.9 3.9 24 6-29 4-27 (260)
221 2z0h_A DTMP kinase, thymidylat 98.3 5.4E-07 1.8E-11 55.6 3.0 23 8-30 2-24 (197)
222 1ixz_A ATP-dependent metallopr 98.2 6.7E-07 2.3E-11 57.6 3.5 23 9-31 52-74 (254)
223 1w1w_A Structural maintenance 98.2 8E-07 2.7E-11 61.5 4.1 27 5-31 25-51 (430)
224 1e6c_A Shikimate kinase; phosp 98.2 4.8E-07 1.7E-11 54.8 2.6 25 7-31 3-27 (173)
225 1qhl_A Protein (cell division 98.2 3.8E-08 1.3E-12 63.6 -2.6 26 7-32 28-53 (227)
226 1mky_A Probable GTP-binding pr 98.2 9.2E-07 3.2E-11 61.5 4.1 25 7-31 181-205 (439)
227 3qkt_A DNA double-strand break 98.2 1E-06 3.6E-11 59.3 3.9 24 5-28 22-45 (339)
228 2www_A Methylmalonic aciduria 98.2 9.9E-07 3.4E-11 59.9 3.8 25 6-30 74-98 (349)
229 2qnr_A Septin-2, protein NEDD5 98.2 5.6E-07 1.9E-11 60.0 2.5 21 9-29 21-41 (301)
230 3lv8_A DTMP kinase, thymidylat 98.2 4.7E-07 1.6E-11 58.7 2.0 41 5-46 26-66 (236)
231 3thx_B DNA mismatch repair pro 98.2 5.4E-07 1.9E-11 67.9 2.6 24 5-28 672-695 (918)
232 1iy2_A ATP-dependent metallopr 98.2 9.6E-07 3.3E-11 57.7 3.5 23 9-31 76-98 (278)
233 2wjg_A FEOB, ferrous iron tran 98.2 1.3E-06 4.4E-11 53.2 3.8 26 5-30 6-31 (188)
234 3sr0_A Adenylate kinase; phosp 98.2 8E-07 2.7E-11 56.4 3.0 24 8-31 2-25 (206)
235 2pbr_A DTMP kinase, thymidylat 98.2 8.4E-07 2.9E-11 54.4 3.0 23 8-30 2-24 (195)
236 2qag_C Septin-7; cell cycle, c 98.2 7.7E-07 2.6E-11 62.0 3.1 23 9-31 34-56 (418)
237 1ni3_A YCHF GTPase, YCHF GTP-b 98.2 9.9E-07 3.4E-11 61.0 3.6 26 5-30 19-44 (392)
238 3qks_A DNA double-strand break 98.2 1.4E-06 4.6E-11 55.0 3.9 25 6-30 23-47 (203)
239 2wji_A Ferrous iron transport 98.2 1.1E-06 3.8E-11 52.9 3.3 24 7-30 4-27 (165)
240 3szr_A Interferon-induced GTP- 98.2 5.6E-07 1.9E-11 65.1 2.3 24 7-30 46-69 (608)
241 1xjc_A MOBB protein homolog; s 98.2 9.9E-07 3.4E-11 54.7 3.0 25 7-31 5-29 (169)
242 2gj8_A MNME, tRNA modification 98.2 1.2E-06 4.2E-11 53.3 3.4 26 5-30 3-28 (172)
243 3thx_A DNA mismatch repair pro 98.2 1E-06 3.4E-11 66.6 3.5 22 5-26 661-682 (934)
244 2o8b_B DNA mismatch repair pro 98.2 1.2E-06 4.3E-11 66.6 3.7 24 6-30 789-812 (1022)
245 2qmh_A HPR kinase/phosphorylas 98.2 1.7E-06 5.7E-11 55.2 3.8 27 5-31 33-59 (205)
246 2pt5_A Shikimate kinase, SK; a 98.2 1.2E-06 4.1E-11 52.9 3.0 24 8-31 2-25 (168)
247 3be4_A Adenylate kinase; malar 98.2 1.1E-06 3.6E-11 55.6 2.8 27 5-31 4-30 (217)
248 2dr3_A UPF0273 protein PH0284; 98.2 1.6E-06 5.3E-11 55.1 3.6 25 5-29 22-46 (247)
249 1ak2_A Adenylate kinase isoenz 98.1 1.5E-06 5.1E-11 55.5 3.5 27 5-31 15-41 (233)
250 2o5v_A DNA replication and rep 98.1 1.5E-06 5.2E-11 59.4 3.3 24 5-29 26-49 (359)
251 2zej_A Dardarin, leucine-rich 98.1 1.4E-06 4.7E-11 53.4 2.8 22 8-29 4-25 (184)
252 2xb4_A Adenylate kinase; ATP-b 98.1 1.4E-06 4.9E-11 55.3 3.0 24 8-31 2-25 (223)
253 1zuh_A Shikimate kinase; alpha 98.1 1.6E-06 5.5E-11 52.5 3.0 25 7-31 8-32 (168)
254 3lxx_A GTPase IMAP family memb 98.1 3.7E-06 1.3E-10 53.6 4.8 25 7-31 30-54 (239)
255 1svi_A GTP-binding protein YSX 98.1 2.6E-06 8.8E-11 52.2 3.9 29 2-30 19-47 (195)
256 1e69_A Chromosome segregation 98.1 1.5E-06 5.2E-11 58.1 2.9 23 8-30 26-48 (322)
257 1tf7_A KAIC; homohexamer, hexa 98.1 2E-06 6.9E-11 61.0 3.7 27 5-31 280-306 (525)
258 1zu4_A FTSY; GTPase, signal re 98.1 1.8E-06 6.3E-11 58.1 3.2 27 5-31 104-130 (320)
259 2f6r_A COA synthase, bifunctio 98.1 2.6E-06 8.9E-11 56.1 3.8 24 5-28 74-97 (281)
260 1e4v_A Adenylate kinase; trans 98.1 1.7E-06 5.8E-11 54.5 2.8 24 8-31 2-25 (214)
261 3t5g_A GTP-binding protein RHE 98.1 1.7E-06 5.7E-11 52.4 2.6 29 1-29 1-29 (181)
262 4edh_A DTMP kinase, thymidylat 98.1 2.1E-06 7.3E-11 54.7 3.2 40 5-46 5-44 (213)
263 1wms_A RAB-9, RAB9, RAS-relate 98.1 2.6E-06 8.9E-11 51.2 3.4 30 1-30 1-31 (177)
264 3lda_A DNA repair protein RAD5 98.1 2.4E-06 8.4E-11 59.1 3.5 23 5-27 177-199 (400)
265 2gf0_A GTP-binding protein DI- 98.1 3.3E-06 1.1E-10 51.7 3.8 30 1-30 2-32 (199)
266 3m6a_A ATP-dependent protease 98.1 2.7E-06 9.2E-11 60.8 3.8 28 5-32 107-134 (543)
267 2grj_A Dephospho-COA kinase; T 98.1 3.1E-06 1.1E-10 53.1 3.5 24 7-30 13-36 (192)
268 3syl_A Protein CBBX; photosynt 98.1 8E-06 2.7E-10 53.6 5.6 26 5-30 66-91 (309)
269 1ega_A Protein (GTP-binding pr 98.1 2.4E-06 8.1E-11 56.8 3.1 26 5-30 7-32 (301)
270 1ls1_A Signal recognition part 98.1 2.5E-06 8.7E-11 56.7 3.2 27 5-31 97-123 (295)
271 3pqc_A Probable GTP-binding pr 98.1 4.2E-06 1.4E-10 51.0 4.0 26 5-30 22-47 (195)
272 2ocp_A DGK, deoxyguanosine kin 98.0 3.7E-06 1.3E-10 53.9 3.8 27 5-31 1-27 (241)
273 4dhe_A Probable GTP-binding pr 98.0 3.4E-06 1.1E-10 52.8 3.5 29 2-30 25-53 (223)
274 1lv7_A FTSH; alpha/beta domain 98.0 3.6E-06 1.2E-10 54.2 3.7 25 7-31 46-70 (257)
275 1udx_A The GTP-binding protein 98.0 1.6E-06 5.4E-11 60.4 2.1 26 6-31 157-182 (416)
276 3bos_A Putative DNA replicatio 98.0 4.1E-06 1.4E-10 52.6 3.8 26 5-30 51-76 (242)
277 2p67_A LAO/AO transport system 98.0 3.6E-06 1.2E-10 56.8 3.7 26 5-30 55-80 (341)
278 3tmk_A Thymidylate kinase; pho 98.0 3.6E-06 1.2E-10 53.9 3.5 27 5-31 4-30 (216)
279 3oes_A GTPase rhebl1; small GT 98.0 3.3E-06 1.1E-10 52.3 3.2 30 1-30 19-48 (201)
280 3cf0_A Transitional endoplasmi 98.0 4.4E-06 1.5E-10 55.3 3.9 27 5-31 48-74 (301)
281 4tmk_A Protein (thymidylate ki 98.0 3.2E-06 1.1E-10 53.9 3.1 40 5-46 2-42 (213)
282 2h92_A Cytidylate kinase; ross 98.0 4.2E-06 1.5E-10 52.5 3.4 26 6-31 3-28 (219)
283 1jbk_A CLPB protein; beta barr 98.0 5.8E-06 2E-10 49.9 3.8 25 6-30 43-67 (195)
284 3k1j_A LON protease, ATP-depen 98.0 4.3E-06 1.5E-10 60.2 3.7 28 5-32 59-86 (604)
285 1p5z_B DCK, deoxycytidine kina 98.0 2.8E-06 9.7E-11 55.1 2.4 27 5-31 23-49 (263)
286 3b1v_A Ferrous iron uptake tra 98.0 1.1E-05 3.6E-10 53.1 5.1 24 7-30 4-27 (272)
287 2fn4_A P23, RAS-related protei 98.0 6E-06 2E-10 49.6 3.6 24 7-30 10-33 (181)
288 3b9p_A CG5977-PA, isoform A; A 98.0 6.6E-06 2.3E-10 53.8 3.9 26 6-31 54-79 (297)
289 2w58_A DNAI, primosome compone 97.9 7.1E-06 2.4E-10 50.9 3.7 24 7-30 55-78 (202)
290 1sxj_C Activator 1 40 kDa subu 97.9 5.4E-06 1.8E-10 55.5 3.3 22 9-30 49-70 (340)
291 3clv_A RAB5 protein, putative; 97.9 1.1E-05 3.6E-10 49.2 4.4 24 7-30 8-31 (208)
292 4fcw_A Chaperone protein CLPB; 97.9 8.4E-06 2.9E-10 53.5 4.2 24 7-30 48-71 (311)
293 1z2a_A RAS-related protein RAB 97.9 6.2E-06 2.1E-10 49.0 3.3 23 8-30 7-29 (168)
294 2dyk_A GTP-binding protein; GT 97.9 6.8E-06 2.3E-10 48.6 3.3 23 8-30 3-25 (161)
295 1kao_A RAP2A; GTP-binding prot 97.9 6.8E-06 2.3E-10 48.6 3.3 23 8-30 5-27 (167)
296 2nzj_A GTP-binding protein REM 97.9 6.5E-06 2.2E-10 49.3 3.2 23 8-30 6-28 (175)
297 2ged_A SR-beta, signal recogni 97.9 9.8E-06 3.4E-10 49.5 4.0 24 7-30 49-72 (193)
298 2ygr_A Uvrabc system protein A 97.9 3.3E-06 1.1E-10 64.1 2.1 23 5-27 667-689 (993)
299 3auy_A DNA double-strand break 97.9 7.7E-06 2.6E-10 55.7 3.8 24 5-28 24-47 (371)
300 3k53_A Ferrous iron transport 97.9 6.1E-06 2.1E-10 53.8 3.1 24 7-30 4-27 (271)
301 2atv_A RERG, RAS-like estrogen 97.9 9.4E-06 3.2E-10 49.9 3.8 25 6-30 28-52 (196)
302 2ce2_X GTPase HRAS; signaling 97.9 7E-06 2.4E-10 48.4 3.1 23 8-30 5-27 (166)
303 2lkc_A Translation initiation 97.9 1E-05 3.5E-10 48.6 3.8 26 5-30 7-32 (178)
304 1wf3_A GTP-binding protein; GT 97.9 1.4E-05 4.6E-10 53.3 4.7 30 1-30 1-31 (301)
305 3kl4_A SRP54, signal recogniti 97.9 5.4E-06 1.8E-10 58.0 2.8 27 5-31 96-122 (433)
306 2qu8_A Putative nucleolar GTP- 97.9 1E-05 3.6E-10 51.1 4.0 26 5-30 28-53 (228)
307 1ky3_A GTP-binding protein YPT 97.9 8.2E-06 2.8E-10 49.1 3.3 23 8-30 10-32 (182)
308 2erx_A GTP-binding protein DI- 97.9 8.4E-06 2.9E-10 48.5 3.3 23 8-30 5-27 (172)
309 1u8z_A RAS-related protein RAL 97.9 8.5E-06 2.9E-10 48.2 3.3 23 8-30 6-28 (168)
310 2ga8_A Hypothetical 39.9 kDa p 97.9 6E-06 2E-10 56.6 2.8 24 8-31 26-49 (359)
311 3hr8_A Protein RECA; alpha and 97.9 8.5E-06 2.9E-10 55.7 3.6 26 5-30 60-85 (356)
312 1z0j_A RAB-22, RAS-related pro 97.9 8.9E-06 3E-10 48.4 3.3 23 8-30 8-30 (170)
313 1ek0_A Protein (GTP-binding pr 97.9 8.7E-06 3E-10 48.4 3.3 23 8-30 5-27 (170)
314 2p65_A Hypothetical protein PF 97.9 7.5E-06 2.6E-10 49.4 3.0 25 6-30 43-67 (187)
315 1z08_A RAS-related protein RAB 97.9 8.9E-06 3.1E-10 48.5 3.3 23 8-30 8-30 (170)
316 3tqf_A HPR(Ser) kinase; transf 97.9 1E-05 3.5E-10 50.6 3.6 25 5-29 15-39 (181)
317 3bwd_D RAC-like GTP-binding pr 97.9 1.1E-05 3.9E-10 48.5 3.8 29 2-30 4-32 (182)
318 1c1y_A RAS-related protein RAP 97.9 9E-06 3.1E-10 48.2 3.3 23 8-30 5-27 (167)
319 3h4m_A Proteasome-activating n 97.9 1.1E-05 3.8E-10 52.4 3.9 28 5-32 50-77 (285)
320 1x6v_B Bifunctional 3'-phospho 97.9 8.3E-06 2.8E-10 59.4 3.6 27 4-30 50-76 (630)
321 3lxw_A GTPase IMAP family memb 97.9 1.3E-05 4.6E-10 51.7 4.2 24 8-31 23-46 (247)
322 1g16_A RAS-related protein SEC 97.9 8.5E-06 2.9E-10 48.5 3.1 23 8-30 5-27 (170)
323 3q85_A GTP-binding protein REM 97.9 8.6E-06 2.9E-10 48.6 3.1 23 8-30 4-26 (169)
324 2vf7_A UVRA2, excinuclease ABC 97.9 2.5E-06 8.7E-11 63.8 0.8 24 5-28 522-546 (842)
325 3q72_A GTP-binding protein RAD 97.9 6.3E-06 2.2E-10 49.0 2.4 23 8-30 4-26 (166)
326 2r6f_A Excinuclease ABC subuni 97.9 3.1E-06 1.1E-10 64.1 1.2 23 5-27 649-671 (972)
327 1l8q_A Chromosomal replication 97.9 1E-05 3.4E-10 53.8 3.5 25 6-30 37-61 (324)
328 2iwr_A Centaurin gamma 1; ANK 97.9 9.9E-06 3.4E-10 48.8 3.2 30 1-30 2-31 (178)
329 1r2q_A RAS-related protein RAB 97.9 1E-05 3.6E-10 48.0 3.3 23 8-30 8-30 (170)
330 1sxj_E Activator 1 40 kDa subu 97.9 7.1E-06 2.4E-10 54.8 2.7 21 9-29 39-59 (354)
331 4dsu_A GTPase KRAS, isoform 2B 97.9 1.1E-05 3.8E-10 48.8 3.3 23 8-30 6-28 (189)
332 3bc1_A RAS-related protein RAB 97.9 1.1E-05 3.7E-10 48.9 3.3 23 8-30 13-35 (195)
333 1njg_A DNA polymerase III subu 97.9 1.3E-05 4.4E-10 49.9 3.7 24 7-30 46-69 (250)
334 4b4t_K 26S protease regulatory 97.8 3.1E-05 1.1E-09 54.1 5.9 26 6-31 206-231 (428)
335 2gks_A Bifunctional SAT/APS ki 97.8 1.3E-05 4.6E-10 57.4 4.1 26 5-30 371-396 (546)
336 2oil_A CATX-8, RAS-related pro 97.8 1.1E-05 3.9E-10 49.3 3.3 23 8-30 27-49 (193)
337 2hxs_A RAB-26, RAS-related pro 97.8 1.4E-05 4.6E-10 48.1 3.5 23 8-30 8-30 (178)
338 4bas_A ADP-ribosylation factor 97.8 9.2E-06 3.2E-10 49.7 2.8 26 5-30 16-41 (199)
339 3tw8_B RAS-related protein RAB 97.8 8.7E-06 3E-10 48.9 2.6 23 8-30 11-33 (181)
340 2qtf_A Protein HFLX, GTP-bindi 97.8 9.5E-06 3.3E-10 55.4 3.1 23 8-30 181-203 (364)
341 2qby_A CDC6 homolog 1, cell di 97.8 1.1E-05 3.6E-10 53.9 3.3 26 5-30 44-69 (386)
342 1upt_A ARL1, ADP-ribosylation 97.8 1.3E-05 4.3E-10 47.8 3.3 25 6-30 7-31 (171)
343 1m2o_B GTP-binding protein SAR 97.8 1.1E-05 3.8E-10 49.6 3.1 23 8-30 25-47 (190)
344 2qz4_A Paraplegin; AAA+, SPG7, 97.8 1.6E-05 5.3E-10 50.9 3.9 26 6-31 39-64 (262)
345 1r8s_A ADP-ribosylation factor 97.8 1.3E-05 4.4E-10 47.6 3.3 22 9-30 3-24 (164)
346 2wsm_A Hydrogenase expression/ 97.8 1.4E-05 4.9E-10 50.0 3.6 25 6-30 30-54 (221)
347 1nrj_B SR-beta, signal recogni 97.8 1.2E-05 4.1E-10 50.2 3.3 24 7-30 13-36 (218)
348 1fzq_A ADP-ribosylation factor 97.8 1.2E-05 4E-10 49.1 3.1 25 6-30 16-40 (181)
349 3iev_A GTP-binding protein ERA 97.8 2.2E-05 7.5E-10 52.2 4.7 24 7-30 11-34 (308)
350 2cxx_A Probable GTP-binding pr 97.8 9.8E-06 3.4E-10 49.2 2.7 23 8-30 3-25 (190)
351 2y8e_A RAB-protein 6, GH09086P 97.8 1.2E-05 4.2E-10 48.2 3.1 23 8-30 16-38 (179)
352 3t1o_A Gliding protein MGLA; G 97.8 1.5E-05 5.2E-10 48.4 3.6 24 8-31 16-39 (198)
353 1ypw_A Transitional endoplasmi 97.8 1.3E-05 4.5E-10 59.7 3.7 28 5-32 237-264 (806)
354 3con_A GTPase NRAS; structural 97.8 1.4E-05 4.7E-10 48.7 3.3 23 8-30 23-45 (190)
355 3ihw_A Centg3; RAS, centaurin, 97.8 1.9E-05 6.4E-10 48.4 3.9 23 8-30 22-44 (184)
356 1z0f_A RAB14, member RAS oncog 97.8 1.4E-05 4.9E-10 47.8 3.3 23 8-30 17-39 (179)
357 2a9k_A RAS-related protein RAL 97.8 1.4E-05 4.9E-10 48.2 3.3 23 8-30 20-42 (187)
358 1g8f_A Sulfate adenylyltransfe 97.8 9.8E-06 3.3E-10 57.8 2.8 27 5-31 394-420 (511)
359 2g6b_A RAS-related protein RAB 97.8 1.5E-05 5E-10 48.0 3.3 23 8-30 12-34 (180)
360 1f6b_A SAR1; gtpases, N-termin 97.8 7.5E-06 2.6E-10 50.8 2.0 22 8-29 27-48 (198)
361 4b4t_L 26S protease subunit RP 97.8 4.2E-05 1.4E-09 53.6 5.9 26 6-31 215-240 (437)
362 2ffh_A Protein (FFH); SRP54, s 97.8 1.3E-05 4.4E-10 56.0 3.3 27 5-31 97-123 (425)
363 2efe_B Small GTP-binding prote 97.8 1.5E-05 5.3E-10 47.9 3.3 23 8-30 14-36 (181)
364 2bme_A RAB4A, RAS-related prot 97.8 1.4E-05 4.8E-10 48.4 3.1 23 8-30 12-34 (186)
365 4hlc_A DTMP kinase, thymidylat 97.8 1.4E-05 4.7E-10 50.6 3.1 26 6-31 2-27 (205)
366 3kkq_A RAS-related protein M-R 97.8 2.2E-05 7.7E-10 47.4 4.0 23 8-30 20-42 (183)
367 4b4t_M 26S protease regulatory 97.8 4.5E-05 1.5E-09 53.4 5.9 26 6-31 215-240 (434)
368 1m7b_A RND3/RHOE small GTP-bin 97.8 1.4E-05 4.9E-10 48.6 3.1 23 8-30 9-31 (184)
369 3tkl_A RAS-related protein RAB 97.8 1.6E-05 5.5E-10 48.5 3.3 23 8-30 18-40 (196)
370 2xtp_A GTPase IMAP family memb 97.8 1.8E-05 6.2E-10 51.0 3.6 24 7-30 23-46 (260)
371 1vg8_A RAS-related protein RAB 97.8 1.7E-05 5.7E-10 48.9 3.3 23 8-30 10-32 (207)
372 1fnn_A CDC6P, cell division co 97.8 2E-05 6.7E-10 52.9 3.9 24 8-31 46-69 (389)
373 2zr9_A Protein RECA, recombina 97.8 1.7E-05 5.7E-10 54.0 3.5 26 5-30 60-85 (349)
374 4b4t_J 26S protease regulatory 97.8 3.9E-05 1.3E-09 53.3 5.4 26 6-31 182-207 (405)
375 2gf9_A RAS-related protein RAB 97.8 1.7E-05 5.8E-10 48.4 3.3 23 8-30 24-46 (189)
376 1mh1_A RAC1; GTP-binding, GTPa 97.8 1.8E-05 6E-10 47.8 3.3 23 8-30 7-29 (186)
377 3hws_A ATP-dependent CLP prote 97.8 2.1E-05 7.2E-10 53.1 3.9 27 5-31 50-76 (363)
378 1z06_A RAS-related protein RAB 97.8 1.9E-05 6.4E-10 48.2 3.3 23 8-30 22-44 (189)
379 1j8m_F SRP54, signal recogniti 97.8 1E-05 3.5E-10 53.9 2.3 27 5-31 97-123 (297)
380 2fg5_A RAB-22B, RAS-related pr 97.8 1.8E-05 6E-10 48.6 3.1 23 8-30 25-47 (192)
381 2cjw_A GTP-binding protein GEM 97.8 1.9E-05 6.4E-10 48.8 3.3 22 8-29 8-29 (192)
382 2a5j_A RAS-related protein RAB 97.8 1.9E-05 6.7E-10 48.3 3.3 23 8-30 23-45 (191)
383 3n70_A Transport activator; si 97.8 2.2E-05 7.4E-10 46.7 3.3 26 5-30 23-48 (145)
384 1zbd_A Rabphilin-3A; G protein 97.7 2E-05 6.7E-10 48.6 3.2 23 8-30 10-32 (203)
385 2bov_A RAla, RAS-related prote 97.7 2.5E-05 8.7E-10 48.0 3.7 23 8-30 16-38 (206)
386 1ksh_A ARF-like protein 2; sma 97.7 1.7E-05 6E-10 48.1 2.9 24 7-30 19-42 (186)
387 3dz8_A RAS-related protein RAB 97.7 1.9E-05 6.6E-10 48.3 3.1 23 8-30 25-47 (191)
388 2hf9_A Probable hydrogenase ni 97.7 2.4E-05 8.1E-10 49.1 3.6 25 6-30 38-62 (226)
389 2p5s_A RAS and EF-hand domain 97.7 2.6E-05 8.8E-10 48.1 3.6 24 7-30 29-52 (199)
390 1x3s_A RAS-related protein RAB 97.7 2.2E-05 7.5E-10 47.8 3.3 23 8-30 17-39 (195)
391 1m8p_A Sulfate adenylyltransfe 97.7 1.8E-05 6.2E-10 57.0 3.2 27 5-31 395-421 (573)
392 1moz_A ARL1, ADP-ribosylation 97.7 1.3E-05 4.4E-10 48.5 2.1 23 6-28 18-40 (183)
393 1ko7_A HPR kinase/phosphatase; 97.7 2.4E-05 8.2E-10 52.7 3.6 25 5-29 143-167 (314)
394 1zd9_A ADP-ribosylation factor 97.7 2.3E-05 7.7E-10 48.0 3.3 23 8-30 24-46 (188)
395 2ew1_A RAS-related protein RAB 97.7 2E-05 7E-10 49.1 3.1 23 8-30 28-50 (201)
396 3c5c_A RAS-like protein 12; GD 97.7 2.3E-05 8E-10 48.0 3.3 23 8-30 23-45 (187)
397 2bcg_Y Protein YP2, GTP-bindin 97.7 2.1E-05 7E-10 48.7 3.1 23 8-30 10-32 (206)
398 3t34_A Dynamin-related protein 97.7 1.8E-05 6.2E-10 53.5 3.0 23 7-29 35-57 (360)
399 3ice_A Transcription terminati 97.7 3E-05 1E-09 54.0 4.1 29 2-30 170-198 (422)
400 3t15_A Ribulose bisphosphate c 97.7 2.6E-05 8.9E-10 51.5 3.7 26 6-31 36-61 (293)
401 2o52_A RAS-related protein RAB 97.7 2E-05 6.9E-10 48.7 2.9 23 8-30 27-49 (200)
402 1v5w_A DMC1, meiotic recombina 97.7 2.7E-05 9.2E-10 52.6 3.7 25 5-29 121-145 (343)
403 3gmt_A Adenylate kinase; ssgci 97.7 1.8E-05 6.2E-10 51.2 2.7 24 8-31 10-33 (230)
404 2atx_A Small GTP binding prote 97.7 1.6E-05 5.3E-10 48.7 2.3 23 8-30 20-42 (194)
405 2dhr_A FTSH; AAA+ protein, hex 97.7 2.2E-05 7.5E-10 55.8 3.4 24 8-31 66-89 (499)
406 1xwi_A SKD1 protein; VPS4B, AA 97.7 3E-05 1E-09 51.9 3.9 25 6-30 45-69 (322)
407 4b4t_H 26S protease regulatory 97.7 5.9E-05 2E-09 53.3 5.5 26 6-31 243-268 (467)
408 3reg_A RHO-like small GTPase; 97.7 2.5E-05 8.7E-10 47.8 3.3 23 8-30 25-47 (194)
409 1zj6_A ADP-ribosylation factor 97.7 2.3E-05 7.9E-10 47.7 3.1 24 7-30 17-40 (187)
410 2qag_A Septin-2, protein NEDD5 97.7 1.6E-05 5.5E-10 54.1 2.5 22 9-30 40-61 (361)
411 2fh5_B SR-beta, signal recogni 97.7 2.5E-05 8.7E-10 48.5 3.3 24 7-30 8-31 (214)
412 3pih_A Uvrabc system protein A 97.7 1.9E-05 6.4E-10 59.7 3.0 19 5-23 609-627 (916)
413 1gwn_A RHO-related GTP-binding 97.7 2.4E-05 8E-10 48.9 3.1 23 8-30 30-52 (205)
414 2il1_A RAB12; G-protein, GDP, 97.7 1.9E-05 6.4E-10 48.5 2.6 23 8-30 28-50 (192)
415 3fdi_A Uncharacterized protein 97.7 3.2E-05 1.1E-09 48.7 3.7 26 6-31 6-31 (201)
416 3iby_A Ferrous iron transport 97.7 2.7E-05 9.2E-10 50.7 3.4 23 8-30 3-25 (256)
417 3cph_A RAS-related protein SEC 97.7 2.7E-05 9.2E-10 48.1 3.3 24 7-30 21-44 (213)
418 3llm_A ATP-dependent RNA helic 97.7 3.1E-05 1.1E-09 49.3 3.6 23 5-27 75-97 (235)
419 2e87_A Hypothetical protein PH 97.7 2.3E-05 7.8E-10 53.1 3.1 25 6-30 167-191 (357)
420 2chg_A Replication factor C sm 97.7 3E-05 1E-09 47.8 3.4 23 8-30 40-62 (226)
421 2j0v_A RAC-like GTP-binding pr 97.7 3.6E-05 1.2E-09 47.7 3.8 24 7-30 10-33 (212)
422 3cbq_A GTP-binding protein REM 97.7 2E-05 6.7E-10 48.8 2.5 22 8-29 25-46 (195)
423 2f7s_A C25KG, RAS-related prot 97.7 2.7E-05 9.2E-10 48.5 3.2 23 8-30 27-49 (217)
424 2h17_A ADP-ribosylation factor 97.7 2.5E-05 8.6E-10 47.4 3.0 24 7-30 22-45 (181)
425 2fv8_A H6, RHO-related GTP-bin 97.7 2.7E-05 9.2E-10 48.4 3.1 23 8-30 27-49 (207)
426 3llu_A RAS-related GTP-binding 97.7 3.2E-05 1.1E-09 47.6 3.5 24 8-31 22-45 (196)
427 2z4s_A Chromosomal replication 97.7 2.9E-05 1E-09 54.1 3.6 25 6-30 130-154 (440)
428 2qgz_A Helicase loader, putati 97.7 4.1E-05 1.4E-09 51.1 4.1 25 6-30 152-176 (308)
429 3dm5_A SRP54, signal recogniti 97.7 2.6E-05 8.9E-10 54.7 3.3 27 5-31 99-125 (443)
430 1ofh_A ATP-dependent HSL prote 97.7 3.1E-05 1.1E-09 50.5 3.5 26 6-31 50-75 (310)
431 2orw_A Thymidine kinase; TMTK, 97.7 2.8E-05 9.5E-10 48.3 3.1 25 5-29 2-26 (184)
432 1d2n_A N-ethylmaleimide-sensit 97.7 3.1E-05 1E-09 50.2 3.4 26 6-31 64-89 (272)
433 2axn_A 6-phosphofructo-2-kinas 97.7 2.6E-05 9E-10 55.5 3.3 26 5-30 34-59 (520)
434 3uk6_A RUVB-like 2; hexameric 97.7 3.2E-05 1.1E-09 51.9 3.5 26 6-31 70-95 (368)
435 3t5d_A Septin-7; GTP-binding p 97.7 2.1E-05 7.1E-10 51.3 2.5 23 8-30 10-32 (274)
436 2h57_A ADP-ribosylation factor 97.7 1.8E-05 6.2E-10 48.3 2.1 23 8-30 23-45 (190)
437 2ohf_A Protein OLA1, GTP-bindi 97.7 2.9E-05 9.8E-10 53.8 3.2 24 6-29 22-45 (396)
438 2j1l_A RHO-related GTP-binding 97.7 2.9E-05 1E-09 48.5 3.0 22 8-29 36-57 (214)
439 4b4t_I 26S protease regulatory 97.6 9.5E-05 3.2E-09 51.8 5.7 26 6-31 216-241 (437)
440 2v1u_A Cell division control p 97.6 2.9E-05 9.9E-10 51.9 3.0 26 5-30 43-68 (387)
441 4ag6_A VIRB4 ATPase, type IV s 97.6 3.5E-05 1.2E-09 52.5 3.5 25 6-30 35-59 (392)
442 3d8b_A Fidgetin-like protein 1 97.6 4.6E-05 1.6E-09 51.6 4.0 26 6-31 117-142 (357)
443 2q3h_A RAS homolog gene family 97.6 4.2E-05 1.4E-09 47.0 3.5 24 7-30 21-44 (201)
444 1um8_A ATP-dependent CLP prote 97.6 4.1E-05 1.4E-09 51.9 3.6 26 6-31 72-97 (376)
445 3a1s_A Iron(II) transport prot 97.6 3.8E-05 1.3E-09 50.0 3.3 23 8-30 7-29 (258)
446 2fu5_C RAS-related protein RAB 97.6 1.8E-05 6.1E-10 47.9 1.6 23 8-30 10-32 (183)
447 3pfi_A Holliday junction ATP-d 97.6 5.7E-05 1.9E-09 50.2 4.2 26 7-32 56-81 (338)
448 2dby_A GTP-binding protein; GD 97.6 3.7E-05 1.3E-09 52.7 3.3 23 8-30 3-25 (368)
449 2gco_A H9, RHO-related GTP-bin 97.6 3.8E-05 1.3E-09 47.5 3.1 23 8-30 27-49 (201)
450 2ce7_A Cell division protein F 97.6 4.4E-05 1.5E-09 53.9 3.7 25 7-31 50-74 (476)
451 2dy1_A Elongation factor G; tr 97.6 4.2E-05 1.4E-09 55.9 3.7 27 4-30 7-33 (665)
452 2hup_A RAS-related protein RAB 97.6 4.1E-05 1.4E-09 47.4 3.1 23 8-30 31-53 (201)
453 3cpj_B GTP-binding protein YPT 97.6 4.4E-05 1.5E-09 47.9 3.3 23 8-30 15-37 (223)
454 2g3y_A GTP-binding protein GEM 97.6 4.2E-05 1.4E-09 48.4 3.2 22 8-29 39-60 (211)
455 3i8s_A Ferrous iron transport 97.6 4E-05 1.4E-09 50.2 3.2 24 7-30 4-27 (274)
456 1bif_A 6-phosphofructo-2-kinas 97.6 4E-05 1.4E-09 53.7 3.3 25 6-30 39-63 (469)
457 4gzl_A RAS-related C3 botulinu 97.6 4.2E-05 1.5E-09 47.5 3.1 23 8-30 32-54 (204)
458 2r62_A Cell division protease 97.6 1.6E-05 5.4E-10 51.3 1.1 25 7-31 45-69 (268)
459 1sky_E F1-ATPase, F1-ATP synth 97.6 4.1E-05 1.4E-09 54.1 3.3 28 3-30 148-175 (473)
460 1jwy_B Dynamin A GTPase domain 97.6 3.9E-05 1.3E-09 50.5 3.0 24 7-30 25-48 (315)
461 3q3j_B RHO-related GTP-binding 97.6 4.8E-05 1.6E-09 47.7 3.3 23 8-30 29-51 (214)
462 2b6h_A ADP-ribosylation factor 97.6 5.3E-05 1.8E-09 46.6 3.4 24 6-29 29-52 (192)
463 3eie_A Vacuolar protein sortin 97.6 5.8E-05 2E-09 50.3 3.8 26 6-31 51-76 (322)
464 3hdt_A Putative kinase; struct 97.6 4.9E-05 1.7E-09 48.8 3.2 26 6-31 14-39 (223)
465 2z43_A DNA repair and recombin 97.6 5.3E-05 1.8E-09 50.7 3.5 26 5-30 106-131 (324)
466 1sxj_D Activator 1 41 kDa subu 97.6 4.8E-05 1.6E-09 50.5 3.3 23 8-30 60-82 (353)
467 1h65_A Chloroplast outer envel 97.6 4.5E-05 1.6E-09 49.6 3.1 23 8-30 41-63 (270)
468 2aka_B Dynamin-1; fusion prote 97.6 6.3E-05 2.1E-09 49.1 3.7 25 6-30 26-50 (299)
469 3p32_A Probable GTPase RV1496/ 97.6 6.6E-05 2.2E-09 50.9 3.9 26 5-30 78-103 (355)
470 1g41_A Heat shock protein HSLU 97.6 6.3E-05 2.2E-09 52.8 3.9 27 6-32 50-76 (444)
471 3cnl_A YLQF, putative uncharac 97.6 7E-05 2.4E-09 49.0 3.9 24 8-31 101-124 (262)
472 2qby_B CDC6 homolog 3, cell di 97.6 6.3E-05 2.1E-09 50.5 3.7 25 6-30 45-69 (384)
473 3def_A T7I23.11 protein; chlor 97.6 5E-05 1.7E-09 49.2 3.1 23 8-30 38-60 (262)
474 2r6a_A DNAB helicase, replicat 97.6 6.4E-05 2.2E-09 52.4 3.8 26 5-30 202-227 (454)
475 2bjv_A PSP operon transcriptio 97.5 6.8E-05 2.3E-09 48.3 3.6 26 6-31 29-54 (265)
476 4ad8_A DNA repair protein RECN 97.5 1.6E-05 5.3E-10 56.4 0.6 24 8-31 62-85 (517)
477 1jal_A YCHF protein; nucleotid 97.5 7.5E-05 2.6E-09 51.2 3.9 25 6-30 2-26 (363)
478 2v3c_C SRP54, signal recogniti 97.5 3.1E-05 1.1E-09 54.1 1.9 25 6-30 99-123 (432)
479 3pvs_A Replication-associated 97.5 7.5E-05 2.6E-09 52.3 3.7 26 7-32 51-76 (447)
480 1tue_A Replication protein E1; 97.5 7.2E-05 2.5E-09 47.8 3.3 26 6-31 58-83 (212)
481 1sxj_A Activator 1 95 kDa subu 97.5 8.2E-05 2.8E-09 52.7 3.9 26 6-31 77-102 (516)
482 1puj_A YLQF, conserved hypothe 97.5 0.00013 4.6E-09 48.1 4.7 24 7-30 121-144 (282)
483 2yc2_C IFT27, small RAB-relate 97.5 1.9E-05 6.6E-10 48.5 0.5 22 8-29 22-43 (208)
484 2zan_A Vacuolar protein sortin 97.5 9.1E-05 3.1E-09 51.6 4.0 25 6-30 167-191 (444)
485 1knx_A Probable HPR(Ser) kinas 97.5 8.2E-05 2.8E-09 50.1 3.5 25 5-29 146-170 (312)
486 4djt_A GTP-binding nuclear pro 97.5 2.2E-05 7.4E-10 49.0 0.6 22 8-29 13-34 (218)
487 2zts_A Putative uncharacterize 97.5 0.0001 3.5E-09 46.6 3.8 24 5-28 29-52 (251)
488 2qp9_X Vacuolar protein sortin 97.5 7.9E-05 2.7E-09 50.5 3.4 25 7-31 85-109 (355)
489 4a9a_A Ribosome-interacting GT 97.5 7.1E-05 2.4E-09 51.5 3.2 50 8-59 74-125 (376)
490 2x77_A ADP-ribosylation factor 97.5 4.2E-05 1.5E-09 46.5 1.9 22 8-29 24-45 (189)
491 2i1q_A DNA repair and recombin 97.5 8.9E-05 3E-09 49.3 3.5 25 5-29 97-121 (322)
492 3co5_A Putative two-component 97.5 2.9E-05 1E-09 46.1 1.0 26 6-31 27-52 (143)
493 3vfd_A Spastin; ATPase, microt 97.5 0.00011 3.7E-09 50.1 3.9 26 6-31 148-173 (389)
494 1c9k_A COBU, adenosylcobinamid 97.4 7.9E-05 2.7E-09 46.5 2.9 22 8-29 1-22 (180)
495 2r44_A Uncharacterized protein 97.4 5.6E-05 1.9E-09 50.2 2.3 27 6-32 46-72 (331)
496 2qen_A Walker-type ATPase; unk 97.4 0.00013 4.3E-09 48.2 3.8 25 6-30 31-55 (350)
497 3cf2_A TER ATPase, transitiona 97.4 0.00021 7.2E-09 53.4 5.3 26 6-31 238-263 (806)
498 2hjg_A GTP-binding protein ENG 97.4 0.00011 3.9E-09 50.9 3.7 23 8-30 5-27 (436)
499 3bh0_A DNAB-like replicative h 97.4 0.00013 4.5E-09 48.7 3.8 25 5-29 67-91 (315)
500 1hqc_A RUVB; extended AAA-ATPa 97.4 6.8E-05 2.3E-09 49.4 2.3 26 6-31 38-63 (324)
No 1
>1ex7_A Guanylate kinase; substrate-induced FIT, domain movement, GMP, ATP, substrate specificity, X-RAY diffraction, transferase; HET: 5GP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1ex6_A* 1gky_A* 3sqk_A 4f4j_A
Probab=99.92 E-value=8.4e-26 Score=142.84 Aligned_cols=81 Identities=25% Similarity=0.367 Sum_probs=76.2
Q ss_pred cEEEEEcCCCCCHHHHHHHHHhhCCcCccccccccCCCCccchhcCCceEeeCccc----------------cccccccC
Q psy4405 7 KTIALVGCQGVGRRTLKARLINSNPEKFAAVIPYTTRPMRELEENGQNYWFTSREV----------------NVGLAGTY 70 (91)
Q Consensus 7 ~~i~l~GpsGaGKsTl~~~L~~~~~~~~~~~v~~~tr~~~~~~~~~~~~~~~~~~~----------------~~~~yg~~ 70 (91)
|+|+|+||||||||||++.|...+|..+...++||||+++.+|.+|.+|+|++.++ .+++||++
T Consensus 2 RpIVi~GPSG~GK~Tl~~~L~~~~~~~~~~svs~TTR~pR~gE~~G~dY~Fvs~~eF~~~i~~g~flE~~~~~g~~YGt~ 81 (186)
T 1ex7_A 2 RPIVISGPSGTGKSTLLKKLFAEYPDSFGFSVSSTTRTPRAGEVNGKDYNFVSVDEFKSMIKNNEFIEWAQFSGNYYGST 81 (186)
T ss_dssp CCEEEECCTTSSHHHHHHHHHHHCTTTEEECCCEECSCCCTTCCBTTTBEECCHHHHHHHHHTTCEEEEEEETTEEEEEE
T ss_pred CEEEEECCCCCCHHHHHHHHHHhCCCCeEEEEEEeccCCCCCCcCCceeEeecHHHHHHHHHcCCEEEEEEEcCceeeee
Confidence 67999999999999999999999987789999999999999999999999999877 78999999
Q ss_pred HHHHHHHHHhCCCeEec
Q psy4405 71 IPMYHSEIRAYPPVEIP 87 (91)
Q Consensus 71 ~~~i~~~~~~g~~~~~~ 87 (91)
.+.+++++++|+.|++-
T Consensus 82 ~~~v~~~l~~g~~vil~ 98 (186)
T 1ex7_A 82 VASVKQVSKSGKTCILD 98 (186)
T ss_dssp HHHHHHHHHHTSEEEEE
T ss_pred cceeeehhhCCCEEEec
Confidence 99999999999999873
No 2
>3ney_A 55 kDa erythrocyte membrane protein; structural genomics consortium, SGC, 55 kDa erythrocyte MEMB protein; 2.26A {Homo sapiens} SCOP: c.37.1.0
Probab=99.91 E-value=1.1e-24 Score=138.78 Aligned_cols=87 Identities=38% Similarity=0.581 Sum_probs=78.6
Q ss_pred CCCCCCcEEEEEcCCCCCHHHHHHHHHhhCCcCccccccccCCCCccchhcCCceEeeCccc----------------cc
Q psy4405 1 MPPLKRKTIALVGCQGVGRRTLKARLINSNPEKFAAVIPYTTRPMRELEENGQNYWFTSREV----------------NV 64 (91)
Q Consensus 1 m~~~~g~~i~l~GpsGaGKsTl~~~L~~~~~~~~~~~v~~~tr~~~~~~~~~~~~~~~~~~~----------------~~ 64 (91)
||+.+|++++|+||||||||||+++|.+.++..+...++++||+++.++.++.+|+|++.++ .+
T Consensus 14 ~~~~~g~~ivl~GPSGaGKsTL~~~L~~~~~~~~~~~vs~TTR~p~~gE~~G~~y~fvs~~~f~~~i~~~~fle~~~~~~ 93 (197)
T 3ney_A 14 LYFQGRKTLVLIGASGVGRSHIKNALLSQNPEKFVYPVPYTTRPPRKSEEDGKEYHFISTEEMTRNISANEFLEFGSYQG 93 (197)
T ss_dssp --CCSCCEEEEECCTTSSHHHHHHHHHHHCTTTEECCCCEECSCCCTTCCTTSSCEECCHHHHHHHHHTTCEEEEEEETT
T ss_pred CCCCCCCEEEEECcCCCCHHHHHHHHHhhCCccEEeeecccccCCcCCeeccccceeccHHHhhhhhhhhhhhhhhhhhc
Confidence 78899999999999999999999999999976688899999999999999999999999766 56
Q ss_pred cccccCHHHHHHHHHhCCCeEec
Q psy4405 65 GLAGTYIPMYHSEIRAYPPVEIP 87 (91)
Q Consensus 65 ~~yg~~~~~i~~~~~~g~~~~~~ 87 (91)
++||++.+.+++++++|+.|++-
T Consensus 94 n~YGt~~~~v~~~l~~G~~vild 116 (197)
T 3ney_A 94 NMFGTKFETVHQIHKQNKIAILD 116 (197)
T ss_dssp EEEEEEHHHHHHHHHTTCEEEEE
T ss_pred eecccchhhHHHHHhcCCeEEEE
Confidence 89999999999999999999874
No 3
>3tau_A Guanylate kinase, GMP kinase; structural genomics, center for structural genomics of infec diseases, csgid, putative guanylate kinase; HET: MSE; 2.05A {Listeria monocytogenes}
Probab=99.84 E-value=6.2e-21 Score=121.41 Aligned_cols=82 Identities=30% Similarity=0.416 Sum_probs=74.5
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCcCccccccccCCCCccchhcCCceEeeCccc----------------cccccc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPEKFAAVIPYTTRPMRELEENGQNYWFTSREV----------------NVGLAG 68 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~~~~~~v~~~tr~~~~~~~~~~~~~~~~~~~----------------~~~~yg 68 (91)
+|++++|+||||||||||+++|.+.++..+...++++||+++.++..+.+|+|++.++ .+++||
T Consensus 7 ~g~~i~l~GpsGsGKsTl~~~L~~~~~~~~~~~~~~~tr~~~~~e~~g~~y~~~~~~~f~~~~~~~~~le~~~~~~~~yg 86 (208)
T 3tau_A 7 RGLLIVLSGPSGVGKGTVREAVFKDPETSFDYSISMTTRLPREGEQDGVDYYFRSREVFEQAIKDGKMLEYAEYVGNYYG 86 (208)
T ss_dssp CCCEEEEECCTTSCHHHHHHHHHHSTTCCCEECCCEESSCCCTTCCBTTTBEECCHHHHHHHHHTTCEEEEEEETTEEEE
T ss_pred CCcEEEEECcCCCCHHHHHHHHHhhCCCcEEEEEecccccCcCcccCCceeEEecHHHHHHHHhcCcEEEEEEEccccCC
Confidence 6899999999999999999999999975578889999999999999999999988654 567899
Q ss_pred cCHHHHHHHHHhCCCeEe
Q psy4405 69 TYIPMYHSEIRAYPPVEI 86 (91)
Q Consensus 69 ~~~~~i~~~~~~g~~~~~ 86 (91)
++...+++++++|+.|++
T Consensus 87 ~~~~~i~~~l~~g~~vil 104 (208)
T 3tau_A 87 TPLEYVEEKLAAGVDIFL 104 (208)
T ss_dssp EEHHHHHHHHHTTCCEEE
T ss_pred CcHHHHHHHHHcCCeEEE
Confidence 999999999999999987
No 4
>1kgd_A CASK, peripheral plasma membrane CASK; maguk, guanylate kinase like domain, protein binding; 1.31A {Homo sapiens} SCOP: c.37.1.1
Probab=99.84 E-value=6.4e-21 Score=118.94 Aligned_cols=84 Identities=38% Similarity=0.589 Sum_probs=70.7
Q ss_pred CCCCcEEEEEcCCCCCHHHHHHHHHhhCCcCccccccccCCCCccchhcCCceEeeCccc----------------cccc
Q psy4405 3 PLKRKTIALVGCQGVGRRTLKARLINSNPEKFAAVIPYTTRPMRELEENGQNYWFTSREV----------------NVGL 66 (91)
Q Consensus 3 ~~~g~~i~l~GpsGaGKsTl~~~L~~~~~~~~~~~v~~~tr~~~~~~~~~~~~~~~~~~~----------------~~~~ 66 (91)
|.+|++++|+||||||||||+++|.+.++..+...++++||+++.++.++.+|+|++.++ .+++
T Consensus 2 ~~~g~~i~i~GpsGsGKSTL~~~L~~~~~~~~~~~i~~ttr~~~~ge~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~n~ 81 (180)
T 1kgd_A 2 SHMRKTLVLLGAHGVGRRHIKNTLITKHPDRFAYPIPHTTRPPKKDEENGKNYYFVSHDQMMQDISNNEYLEYGSHEDAM 81 (180)
T ss_dssp -CCCCEEEEECCTTSSHHHHHHHHHHHCTTTEECCCCEECSCC---CCBTTTBEECCHHHHHHHHHTTCEEEEEEETTEE
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHhhCCccEEEeeeccCCCCCccccCCCeeEEeCHHHHHHHHHcCCceEEEEEcCcc
Confidence 457999999999999999999999999874477789999999998888999999987554 4578
Q ss_pred cccCHHHHHHHHHhCCCeEe
Q psy4405 67 AGTYIPMYHSEIRAYPPVEI 86 (91)
Q Consensus 67 yg~~~~~i~~~~~~g~~~~~ 86 (91)
||++.+.+++++++|+.+++
T Consensus 82 yg~~~~~i~~~l~~g~~vil 101 (180)
T 1kgd_A 82 YGTKLETIRKIHEQGLIAIL 101 (180)
T ss_dssp EEEEHHHHHHHHHTTCEEEE
T ss_pred ccccHHHHHHHHHCCCeEEE
Confidence 99999999999999999887
No 5
>3a00_A Guanylate kinase, GMP kinase; domain movement, dimerization, acetylation, ATP-binding, nucleotide-binding, phosphoprotein, transferase; 1.80A {Saccharomyces cerevisiae} PDB: 1ex6_A* 1ex7_A 1gky_A* 2zzz_A 3sqk_A 4f4j_A 2zzy_A
Probab=99.82 E-value=1.2e-20 Score=118.11 Aligned_cols=81 Identities=25% Similarity=0.369 Sum_probs=72.8
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhCCcCccccccccCCCCccchhcCCceEeeCccc----------------ccccccc
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSNPEKFAAVIPYTTRPMRELEENGQNYWFTSREV----------------NVGLAGT 69 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~~~~~~~~v~~~tr~~~~~~~~~~~~~~~~~~~----------------~~~~yg~ 69 (91)
|++++|+||||||||||+++|.+.++..++..++++||+++.++.++.+|+|.+.+. .+++||+
T Consensus 1 ~~ii~l~GpsGaGKsTl~~~L~~~~~~~~~~~~~~~tr~~~~ge~~g~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~yg~ 80 (186)
T 3a00_A 1 SRPIVISGPSGTGKSTLLKKLFAEYPDSFGFSVSSTTRTPRAGEVNGKDYNFVSVDEFKSMIKNNEFIEWAQFSGNYYGS 80 (186)
T ss_dssp CCCEEEESSSSSSHHHHHHHHHHHCGGGEECCCEEECSCCCTTCCBTTTBEECCHHHHHHHHHTTCEEEEEEETTEEEEE
T ss_pred CCEEEEECCCCCCHHHHHHHHHhhCCccceEEeeccccCCCCCccCCeeeeecCHHHHHHHHhhcceeeEEEEeceeccC
Confidence 578999999999999999999999986788899999999999988999999887554 5678999
Q ss_pred CHHHHHHHHHhCCCeEe
Q psy4405 70 YIPMYHSEIRAYPPVEI 86 (91)
Q Consensus 70 ~~~~i~~~~~~g~~~~~ 86 (91)
+.+.+++++++|+.+++
T Consensus 81 ~~~~i~~~l~~g~~~il 97 (186)
T 3a00_A 81 TVASVKQVSKSGKTCIL 97 (186)
T ss_dssp EHHHHHHHHHTTCEEEE
T ss_pred cHHHHHHHHHcCCeEEE
Confidence 99999999999998887
No 6
>1kjw_A Postsynaptic density protein 95; protein-protein interaction, scaffold, neuropeptide; 1.80A {Rattus norvegicus} SCOP: b.34.2.1 c.37.1.1 PDB: 1jxm_A* 1jxo_A
Probab=99.79 E-value=1.2e-19 Score=121.49 Aligned_cols=83 Identities=29% Similarity=0.426 Sum_probs=75.5
Q ss_pred CCCCCcEEEEEcCCCCCHHHHHHHHHhhCCcCccccccccCCCCccchhcCCceEee-Cccc----------------cc
Q psy4405 2 PPLKRKTIALVGCQGVGRRTLKARLINSNPEKFAAVIPYTTRPMRELEENGQNYWFT-SREV----------------NV 64 (91)
Q Consensus 2 ~~~~g~~i~l~GpsGaGKsTl~~~L~~~~~~~~~~~v~~~tr~~~~~~~~~~~~~~~-~~~~----------------~~ 64 (91)
++..+++++|+|| ||+||++.|...++..|...+++|||+++.+|.+|.+|+|+ +.++ .+
T Consensus 101 ~~~~~r~ivl~GP---gK~tl~~~L~~~~~~~~~~~vs~TTR~~R~gE~~G~dY~Fv~s~eef~~~i~~g~flE~~~~~g 177 (295)
T 1kjw_A 101 EVHYARPIIILGP---TKDRANDDLLSEFPDKFGSCVPHTTRPKREYEIDGRDYHFVSSREKMEKDIQAHKFIEAGQYNS 177 (295)
T ss_dssp ECCSCCCEEEEST---THHHHHHHHHHHCTTTEECCCCEECSCCCTTCCBTTTBEECSCHHHHHHHHHTTCEEEEEEETT
T ss_pred cCCCCCEEEEECC---CHHHHHHHHHhhCccceeeeeeecccCCCCccccCceeEecCCHHHHHHHHHCCCcEEEEEEcC
Confidence 4457899999999 79999999999998678899999999999999999999999 7665 78
Q ss_pred cccccCHHHHHHHHHhCCCeEec
Q psy4405 65 GLAGTYIPMYHSEIRAYPPVEIP 87 (91)
Q Consensus 65 ~~yg~~~~~i~~~~~~g~~~~~~ 87 (91)
++||++.+.+++++++|+.|++-
T Consensus 178 ~~YGt~~~~V~~~~~~G~~vild 200 (295)
T 1kjw_A 178 HLYGTSVQSVREVAEQGKHCILD 200 (295)
T ss_dssp EEEEEEHHHHHHHHHTTCEEEEC
T ss_pred cEeeeeHHHHHHHHhcCCeEEEE
Confidence 89999999999999999999874
No 7
>1lvg_A Guanylate kinase, GMP kinase; transferase; HET: ADP 5GP; 2.10A {Mus musculus} SCOP: c.37.1.1
Probab=99.79 E-value=1.5e-19 Score=114.36 Aligned_cols=84 Identities=27% Similarity=0.397 Sum_probs=69.8
Q ss_pred CCCCCCcEEEEEcCCCCCHHHHHHHHHhhCCcCccccccccCCCCccchhcCCceEeeCccc----------------cc
Q psy4405 1 MPPLKRKTIALVGCQGVGRRTLKARLINSNPEKFAAVIPYTTRPMRELEENGQNYWFTSREV----------------NV 64 (91)
Q Consensus 1 m~~~~g~~i~l~GpsGaGKsTl~~~L~~~~~~~~~~~v~~~tr~~~~~~~~~~~~~~~~~~~----------------~~ 64 (91)
|++ |++++|+||||||||||+++|.+.++..++..++++||+++.++.++.+|++++.++ .+
T Consensus 1 m~~--g~~i~lvGpsGaGKSTLl~~L~~~~~~~~~~~v~~ttr~~~~g~~~g~~~~~~~~~~~~~~i~~~~~l~~~~~~~ 78 (198)
T 1lvg_A 1 MAG--PRPVVLSGPSGAGKSTLLKKLFQEHSSIFGFSVSHTTRNPRPGEEDGKDYYFVTREMMQRDIAAGDFIEHAEFSG 78 (198)
T ss_dssp ------CCEEEECCTTSSHHHHHHHHHHHHTTTEEECCCEECSCCCTTCCBTTTBEECCHHHHHHHHHHTCEEEEEEETT
T ss_pred CCC--CCEEEEECCCCCCHHHHHHHHHhhCchhceeeeeeeccCCCCcccCCceEEEccHHHHHHHHHcCCCEeeeeecC
Confidence 554 899999999999999999999999876788889999999988888899999887543 46
Q ss_pred cccccCHHHHHHHHHhCCCeEe
Q psy4405 65 GLAGTYIPMYHSEIRAYPPVEI 86 (91)
Q Consensus 65 ~~yg~~~~~i~~~~~~g~~~~~ 86 (91)
++||.+.+.++++++.++.+++
T Consensus 79 n~~g~~~~~i~~~~~~~~~~~~ 100 (198)
T 1lvg_A 79 NLYGTSKEAVRAVQAMNRICVL 100 (198)
T ss_dssp EEEEEEHHHHHHHHHTTCEEEE
T ss_pred ccCCCCHHHHHHHHHcCCcEEE
Confidence 7799999899999998877665
No 8
>3tvt_A Disks large 1 tumor suppressor protein; DLG, SRC-homology-3, guanylate kinase, phosphorylation-depen cell membrane; 1.60A {Drosophila melanogaster} PDB: 3uat_A*
Probab=99.79 E-value=1.5e-19 Score=120.87 Aligned_cols=83 Identities=29% Similarity=0.465 Sum_probs=75.3
Q ss_pred CCCCCCcEEEEEcCCCCCHHHHHHHHHhhCCcCccccccccCCCCccchhcCCceEeeC-ccc----------------c
Q psy4405 1 MPPLKRKTIALVGCQGVGRRTLKARLINSNPEKFAAVIPYTTRPMRELEENGQNYWFTS-REV----------------N 63 (91)
Q Consensus 1 m~~~~g~~i~l~GpsGaGKsTl~~~L~~~~~~~~~~~v~~~tr~~~~~~~~~~~~~~~~-~~~----------------~ 63 (91)
||+...|+++|+||+ |+||++.|...+|..|...+++|||+++.+|.+|.+|+|++ .++ .
T Consensus 95 ~~~~~~RpvVl~Gp~---K~tl~~~Ll~~~p~~f~~sVs~TTR~pR~gE~dG~dY~Fv~s~e~fe~~i~~~~flE~a~~~ 171 (292)
T 3tvt_A 95 LSINYTRPVIILGPL---KDRINDDLISEYPDKFGSCVPHTTRPKREYEVDGRDYHFVSSREQMERDIQNHLFIEAGQYN 171 (292)
T ss_dssp EECSSCCCEEEESTT---HHHHHHHHHHHCTTTEECCCCEECSCCCTTCCBTTTBEECSCHHHHHHHHHTTCEEEEEEET
T ss_pred ccCCCCCeEEEeCCC---HHHHHHHHHHhChhhccccccCCccCCcCCccCCccccccCCHHHHHHHHhcCceEEEEEEc
Confidence 356678999999994 99999999999998899999999999999999999999994 332 7
Q ss_pred ccccccCHHHHHHHHHhCCCeEe
Q psy4405 64 VGLAGTYIPMYHSEIRAYPPVEI 86 (91)
Q Consensus 64 ~~~yg~~~~~i~~~~~~g~~~~~ 86 (91)
+++||++.+.+++++++|+.|++
T Consensus 172 gn~YGT~~~~V~~~~~~gk~viL 194 (292)
T 3tvt_A 172 DNLYGTSVASVREVAEKGKHCIL 194 (292)
T ss_dssp TEEEEEEHHHHHHHHHHTCEEEE
T ss_pred cceeEEehHHHHHHHHcCCcEEE
Confidence 89999999999999999999987
No 9
>1s96_A Guanylate kinase, GMP kinase; E.coli, dimer, SAD, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.1 PDB: 2an9_A* 2anb_A* 2anc_A 2f3r_A* 2f3t_A*
Probab=99.79 E-value=2.7e-19 Score=115.24 Aligned_cols=84 Identities=20% Similarity=0.250 Sum_probs=69.8
Q ss_pred CCCCCCcEEEEEcCCCCCHHHHHHHHHhhCCc-CccccccccCCCCccchhcCCceEeeCccc----------------c
Q psy4405 1 MPPLKRKTIALVGCQGVGRRTLKARLINSNPE-KFAAVIPYTTRPMRELEENGQNYWFTSREV----------------N 63 (91)
Q Consensus 1 m~~~~g~~i~l~GpsGaGKsTl~~~L~~~~~~-~~~~~v~~~tr~~~~~~~~~~~~~~~~~~~----------------~ 63 (91)
||+ |++++|+||||||||||+++|.+.+++ .+.+.+++++|+++.++..+.+|.|.+... .
T Consensus 13 ~~~--G~ii~l~GpsGsGKSTLlk~L~g~~~p~~~~g~v~~ttr~~~~~e~~gi~y~fq~~~~f~~~~~~~~f~E~~~~~ 90 (219)
T 1s96_A 13 MAQ--GTLYIVSAPSGAGKSSLIQALLKTQPLYDTQVSVSHTTRQPRPGEVHGEHYFFVNHDEFKEMISRDAFLEHAEVF 90 (219)
T ss_dssp --C--CCEEEEECCTTSCHHHHHHHHHHHSCTTTEEECCCEECSCCCTTCCBTTTBEECCHHHHHHHHHTTCEEEEEEET
T ss_pred CCC--CcEEEEECCCCCCHHHHHHHHhccCCCCceEEEEEecCCCCCcccccCceEEECCHHHHHHHHhcCHHHHHHHHH
Confidence 555 999999999999999999999999874 366788999998887777888899887443 4
Q ss_pred ccccccCHHHHHHHHHhCCCeEe
Q psy4405 64 VGLAGTYIPMYHSEIRAYPPVEI 86 (91)
Q Consensus 64 ~~~yg~~~~~i~~~~~~g~~~~~ 86 (91)
+++||++.+.++++++.|+.+++
T Consensus 91 ~~~yg~~~~~v~~~l~~G~illL 113 (219)
T 1s96_A 91 GNYYGTSREAIEQVLATGVDVFL 113 (219)
T ss_dssp TEEEEEEHHHHHHHHTTTCEEEE
T ss_pred hccCCCCHHHHHHHHhcCCeEEE
Confidence 56789988889999999988776
No 10
>2qor_A Guanylate kinase; phosphotransferase, purine metabolism, structural genomics, structural genomics of pathogenic protozoa consortium; HET: 5GP POP; 1.80A {Plasmodium vivax}
Probab=99.76 E-value=1.2e-18 Score=110.27 Aligned_cols=82 Identities=27% Similarity=0.431 Sum_probs=71.6
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCcCccccccccCCCCccchhcCCceEeeCccc----------------cccccc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPEKFAAVIPYTTRPMRELEENGQNYWFTSREV----------------NVGLAG 68 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~~~~~~v~~~tr~~~~~~~~~~~~~~~~~~~----------------~~~~yg 68 (91)
+|++++|+||||||||||++.|...++..+...++++||+++.++.++.+|+|++.++ .+++|+
T Consensus 11 ~~~~i~l~G~sGsGKsTl~~~L~~~~~~~~~~~~~~ttR~~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (204)
T 2qor_A 11 RIPPLVVCGPSGVGKGTLIKKVLSEFPSRFRFSISCTTRNKREKETNGVDYYFVDKDDFERKLKEGQFLEFDKYANNFYG 90 (204)
T ss_dssp CCCCEEEECCTTSCHHHHHHHHHHHCTTTEEECCEEECSCCCTTCCBTTTEEECCHHHHHHHHHTTCEEEEEEETTEEEE
T ss_pred cCCEEEEECCCCCCHHHHHHHHHHhCccceeeeeeecCCCCCCCCCCCcceeeCCHHHHHHHHHcCCCEEeHHhCCCeec
Confidence 5889999999999999999999999863377788999999999999999999987644 456788
Q ss_pred cCHHHHHHHHHhCCCeEe
Q psy4405 69 TYIPMYHSEIRAYPPVEI 86 (91)
Q Consensus 69 ~~~~~i~~~~~~g~~~~~ 86 (91)
++.+.++++++.|+.|++
T Consensus 91 ~~~~~i~~~l~~g~~vi~ 108 (204)
T 2qor_A 91 TLKSEYDLAVGEGKICLF 108 (204)
T ss_dssp EEHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHcCCeEEE
Confidence 888889999999998887
No 11
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=99.69 E-value=4.7e-17 Score=119.18 Aligned_cols=84 Identities=30% Similarity=0.443 Sum_probs=76.2
Q ss_pred CCCCCCcEEEEEcCCCCCHHHHHHHHHhhCCcCccccccccCCCCccchhcCCceEee-Cccc----------------c
Q psy4405 1 MPPLKRKTIALVGCQGVGRRTLKARLINSNPEKFAAVIPYTTRPMRELEENGQNYWFT-SREV----------------N 63 (91)
Q Consensus 1 m~~~~g~~i~l~GpsGaGKsTl~~~L~~~~~~~~~~~v~~~tr~~~~~~~~~~~~~~~-~~~~----------------~ 63 (91)
||+..+++++|+||+ |+||+++|...++..|.+.+++|||+++.+|.+|.+|+|+ +.++ .
T Consensus 526 ~~~~~~r~vvl~GP~---K~tl~~~L~~~~~~~~~~~vs~TTR~~r~gE~~G~dY~Fv~s~~~f~~~i~~~~flE~~~~~ 602 (721)
T 2xkx_A 526 MEVHYARPIIILGPT---KDRANDDLLSEFPDKFGSCVPHTTRPKREYEIDGRDYHFVSSREKMEKDIRAHKFIEAGQYN 602 (721)
T ss_pred ccCCCCCEEEEECCC---HHHHHHHHHHhCccceeecccccccCCCCCccCCceeEEecCHHHHHHHHhcCCceEEEEEC
Confidence 456678999999995 9999999999998678899999999999999999999999 7665 7
Q ss_pred ccccccCHHHHHHHHHhCCCeEec
Q psy4405 64 VGLAGTYIPMYHSEIRAYPPVEIP 87 (91)
Q Consensus 64 ~~~yg~~~~~i~~~~~~g~~~~~~ 87 (91)
+++||++.+.+++++++|+.|++-
T Consensus 603 g~~YGt~~~~v~~~~~~g~~~ild 626 (721)
T 2xkx_A 603 SHLYGTSVQSVREVAEQGKHCILD 626 (721)
T ss_pred CccceeeHHHHHHHHHCCCcEEEe
Confidence 899999999999999999999874
No 12
>3tr0_A Guanylate kinase, GMP kinase; purines, pyrimidines, nucleosides, nucleotides, transferase; HET: 5GP; 1.85A {Coxiella burnetii}
Probab=99.67 E-value=1.6e-16 Score=99.76 Aligned_cols=81 Identities=22% Similarity=0.297 Sum_probs=64.8
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCcCccccccccCCCCccchhcCCceEeeCccc----------------cccccc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPEKFAAVIPYTTRPMRELEENGQNYWFTSREV----------------NVGLAG 68 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~~~~~~v~~~tr~~~~~~~~~~~~~~~~~~~----------------~~~~yg 68 (91)
+|++++|+||||||||||+++|.+.++ .+.....+.++.++.++..+..|.|.+... .++.|+
T Consensus 6 ~g~ii~l~Gp~GsGKSTl~~~L~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (205)
T 3tr0_A 6 KANLFIISAPSGAGKTSLVRALVKALA-EIKISISHTTRPKRPGDQEGVDYFFIDETRFQAMVKEGAFLEHATIYERHYG 84 (205)
T ss_dssp CCCEEEEECCTTSCHHHHHHHHHHHSS-SEEECCCEECSCCCTTCCBTTTBEECCHHHHHHHHHHTCEEEEEEETTEEEE
T ss_pred CCcEEEEECcCCCCHHHHHHHHHhhCC-CeEEeceeccCCCchhHhcCceEEeccHHHHHHHHhcCcEEeeeeeeccccc
Confidence 489999999999999999999999986 455556666777766666777787776443 456788
Q ss_pred cCHHHHHHHHHhCCCeEe
Q psy4405 69 TYIPMYHSEIRAYPPVEI 86 (91)
Q Consensus 69 ~~~~~i~~~~~~g~~~~~ 86 (91)
.+.+.+++.++.|+.+++
T Consensus 85 ~~~~~i~~~l~~g~~vi~ 102 (205)
T 3tr0_A 85 TEKDWVLRQLKAGRDVLL 102 (205)
T ss_dssp EEHHHHHHHHHTTCEEEE
T ss_pred chHHHHHHHHHcCCeEEE
Confidence 888899999999988765
No 13
>3lnc_A Guanylate kinase, GMP kinase; ALS collaborative crystallography, emerald biostructures, ATP-binding, cytoplasm, nucleotide-binding; HET: 5GP; 1.95A {Anaplasma phagocytophilum}
Probab=99.64 E-value=1.3e-16 Score=102.37 Aligned_cols=81 Identities=20% Similarity=0.308 Sum_probs=60.7
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHH-hhCCcCccccccccCCCCccchhcCCceEeeCccc----------------ccccc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLI-NSNPEKFAAVIPYTTRPMRELEENGQNYWFTSREV----------------NVGLA 67 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~-~~~~~~~~~~v~~~tr~~~~~~~~~~~~~~~~~~~----------------~~~~y 67 (91)
+|++++|+||||||||||+++|. +.++. +...+.+++++++.++..+.+|.+.+... .+++|
T Consensus 26 ~G~ii~l~Gp~GsGKSTl~~~L~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (231)
T 3lnc_A 26 VGVILVLSSPSGCGKTTVANKLLEKQKNN-IVKSVSVTTRAARKGEKEGKDYYFVDREEFLRLCSNGEIIEHAEVFGNFY 104 (231)
T ss_dssp CCCEEEEECSCC----CHHHHHHC----C-EEECCCEESSCCCTTCCBTTTBEECCHHHHHHHHHTTCEEEEEEETTEEE
T ss_pred CCCEEEEECCCCCCHHHHHHHHHhcCCCC-cccccccCCCCCCccccCCCeEEEecHHHhhhhhhcCceehhhhhccccC
Confidence 58999999999999999999999 98873 66677888998888888888888877554 45678
Q ss_pred ccCHHHHHHHHHhCCCeEe
Q psy4405 68 GTYIPMYHSEIRAYPPVEI 86 (91)
Q Consensus 68 g~~~~~i~~~~~~g~~~~~ 86 (91)
+.+...++++++.++.+++
T Consensus 105 ~~~~~~i~~~~~~~~~vil 123 (231)
T 3lnc_A 105 GVPRKNLEDNVDKGVSTLL 123 (231)
T ss_dssp EEECTTHHHHHHHTCEEEE
T ss_pred CCCHHHHHHHHHcCCeEEE
Confidence 8888889999999988775
No 14
>1z6g_A Guanylate kinase; structural genomics, SGC, structural genom consortium, transferase; HET: EPE; 2.18A {Plasmodium falciparum}
Probab=99.58 E-value=4.5e-15 Score=95.01 Aligned_cols=82 Identities=27% Similarity=0.423 Sum_probs=60.3
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCcCccccccccCCCCccchhcCCceEeeCccc----------------cccccc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPEKFAAVIPYTTRPMRELEENGQNYWFTSREV----------------NVGLAG 68 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~~~~~~v~~~tr~~~~~~~~~~~~~~~~~~~----------------~~~~yg 68 (91)
+|++++|+||||||||||+++|++.++..+...++++++.++..+..+.+|.|.+... .++.||
T Consensus 22 ~G~~~~lvGpsGsGKSTLl~~L~g~~pG~i~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g 101 (218)
T 1z6g_A 22 NIYPLVICGPSGVGKGTLIKKLLNEFPNYFYFSVSCTTRKKREKEKEGVDYYFIDKTIFEDKLKNEDFLEYDNYANNFYG 101 (218)
T ss_dssp CCCCEEEECSTTSSHHHHHHHHHHHSTTTEEECCCEECSCCCSSCCBTTTBEECCHHHHHHHHHTTCEEEEEEETTEEEE
T ss_pred CCCEEEEECCCCCCHHHHHHHHHhhCCCcEEEeecccCCCCCcccccCCeEEECCHHHHHHhhhccchhhhhhcccccCC
Confidence 5899999999999999999999999852222345556665554455667777765322 245788
Q ss_pred cCHHHHHHHHHhCCCeEe
Q psy4405 69 TYIPMYHSEIRAYPPVEI 86 (91)
Q Consensus 69 ~~~~~i~~~~~~g~~~~~ 86 (91)
.+...++++++.++.+++
T Consensus 102 ~~~~~i~~~l~~~~~~il 119 (218)
T 1z6g_A 102 TLKSEYDKAKEQNKICLF 119 (218)
T ss_dssp EEHHHHHHHHHTTCEEEE
T ss_pred CcHHHHHHHHhCCCcEEE
Confidence 888889999999887665
No 15
>2j41_A Guanylate kinase; GMP, GMK, transferase, ATP-binding, nucleotide- binding; HET: 5GP; 1.9A {Staphylococcus aureus}
Probab=99.57 E-value=8.6e-15 Score=91.79 Aligned_cols=84 Identities=29% Similarity=0.409 Sum_probs=61.2
Q ss_pred CCCcEEEEEcCCCCCHHHHHHHHHhhCCcCccccccccCCCCccchhcCCceEeeCccc----------------ccccc
Q psy4405 4 LKRKTIALVGCQGVGRRTLKARLINSNPEKFAAVIPYTTRPMRELEENGQNYWFTSREV----------------NVGLA 67 (91)
Q Consensus 4 ~~g~~i~l~GpsGaGKsTl~~~L~~~~~~~~~~~v~~~tr~~~~~~~~~~~~~~~~~~~----------------~~~~y 67 (91)
.+|++++|+|||||||||++++|.+.+.+..+..+.+.++.+..++..+.++.|.+.+. .+++|
T Consensus 4 ~~g~~i~l~G~~GsGKSTl~~~L~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (207)
T 2j41_A 4 EKGLLIVLSGPSGVGKGTVRKRIFEDPSTSYKYSISMTTRQMREGEVDGVDYFFKTRDAFEALIKDDQFIEYAEYVGNYY 83 (207)
T ss_dssp CCCCEEEEECSTTSCHHHHHHHHHHCTTCCEECCCCEECSCCCTTCCBTTTBEECCHHHHHHHHHTTCEEEEEEETTEEE
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHhhCCCeEEecccccCCCCCCccCCCceEEcCHHHHHHHHHcCCeEEEEeECCeec
Confidence 46899999999999999999999998832344355666776654445556666655321 34567
Q ss_pred ccCHHHHHHHHHhCCCeEec
Q psy4405 68 GTYIPMYHSEIRAYPPVEIP 87 (91)
Q Consensus 68 g~~~~~i~~~~~~g~~~~~~ 87 (91)
|...+.+++.++.|+.+++-
T Consensus 84 g~~~~~i~~~l~~g~~vv~d 103 (207)
T 2j41_A 84 GTPVQYVKDTMDEGHDVFLE 103 (207)
T ss_dssp EEEHHHHHHHHHTTCEEEEE
T ss_pred CCCHHHHHHHHHcCCeEEEE
Confidence 88888889999888877653
No 16
>3exa_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacillus halodurans} PDB: 2qgn_A
Probab=99.55 E-value=6.9e-15 Score=99.26 Aligned_cols=81 Identities=14% Similarity=0.068 Sum_probs=68.8
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhCCcC--------ccccccccCCCCccchhcCCceEeeCccc------cccccccCH
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSNPEK--------FAAVIPYTTRPMRELEENGQNYWFTSREV------NVGLAGTYI 71 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~~~~--------~~~~v~~~tr~~~~~~~~~~~~~~~~~~~------~~~~yg~~~ 71 (91)
+++++|+||||||||||+..|+..++.. .-..++++|++|+..|..+.+|+|++..+ .+.++....
T Consensus 3 ~~~i~i~GptgsGKt~la~~La~~~~~~iis~Ds~QvYr~~~igTakp~~~E~~gvphhlid~~~~~e~~s~~~F~~~a~ 82 (322)
T 3exa_A 3 EKLVAIVGPTAVGKTKTSVMLAKRLNGEVISGDSMQVYRGMDIGTAKITAEEMDGVPHHLIDIKDPSESFSVADFQDLAT 82 (322)
T ss_dssp CEEEEEECCTTSCHHHHHHHHHHTTTEEEEECCGGGGBTTCCTTTTCCCHHHHTTCCEESSSCBCTTSCCCHHHHHHHHH
T ss_pred CcEEEEECCCcCCHHHHHHHHHHhCccceeecCcccceeeeeecCCCCCHHHHcCCCEEEeccCChhhhccHHHHHHHHH
Confidence 5689999999999999999999988631 12356788999999999999999999776 566777788
Q ss_pred HHHHHHHHhCCCeEe
Q psy4405 72 PMYHSEIRAYPPVEI 86 (91)
Q Consensus 72 ~~i~~~~~~g~~~~~ 86 (91)
..++++.++|+.|+|
T Consensus 83 ~~i~~i~~~gk~pIl 97 (322)
T 3exa_A 83 PLITEIHERGRLPFL 97 (322)
T ss_dssp HHHHHHHHTTCEEEE
T ss_pred HHHHHHHhCCCcEEE
Confidence 899999999999887
No 17
>3foz_A TRNA delta(2)-isopentenylpyrophosphate transferas; nucleoside modification, isopentenyl-tRNA transferase, transferase-RNA complex; 2.50A {Escherichia coli k-12} PDB: 2zxu_A* 2zm5_A
Probab=99.55 E-value=5.3e-15 Score=99.66 Aligned_cols=82 Identities=13% Similarity=-0.021 Sum_probs=68.8
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCc--------CccccccccCCCCccchhcCCceEeeCccc------cccccccC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPE--------KFAAVIPYTTRPMRELEENGQNYWFTSREV------NVGLAGTY 70 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~--------~~~~~v~~~tr~~~~~~~~~~~~~~~~~~~------~~~~yg~~ 70 (91)
.+++++|+||+|||||||+..|++.++. ..-..++++|++|+..|..+.+|||++..+ .+.++...
T Consensus 9 ~~~~i~i~GptgsGKt~la~~La~~~~~~iis~Ds~qvY~~~~igTakp~~~E~~~v~hhlid~~~~~e~~s~~~f~~~a 88 (316)
T 3foz_A 9 LPKAIFLMGPTASGKTALAIELRKILPVELISVDSALIYKGMDIGTAKPNAEELLAAPHRLLDIRDPSQAYSAADFRRDA 88 (316)
T ss_dssp CCEEEEEECCTTSCHHHHHHHHHHHSCEEEEECCTTTTBTTCCTTTTCCCHHHHHHSCEETSSCBCTTSCCCHHHHHHHH
T ss_pred CCcEEEEECCCccCHHHHHHHHHHhCCCcEEecccccccccccccCCCCCHHHHcCCCEEEeccCCccccccHHHHHHHH
Confidence 4678999999999999999999998863 122346678999999999999999999776 55667777
Q ss_pred HHHHHHHHHhCCCeEe
Q psy4405 71 IPMYHSEIRAYPPVEI 86 (91)
Q Consensus 71 ~~~i~~~~~~g~~~~~ 86 (91)
...++++.++|+.+++
T Consensus 89 ~~~i~~i~~~g~~pil 104 (316)
T 3foz_A 89 LAEMADITAAGRIPLL 104 (316)
T ss_dssp HHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHhCCCcEEE
Confidence 7889999999998876
No 18
>1znw_A Guanylate kinase, GMP kinase; ATP:GMP-phosphotransferase, TR; 2.10A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1znx_A* 1zny_A* 1znz_A* 1s4q_A 1z8f_A
Probab=99.52 E-value=4.4e-14 Score=89.44 Aligned_cols=80 Identities=24% Similarity=0.263 Sum_probs=56.7
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCcCccccccccCCCCccchhcCCceEeeCccc----------------cc--cc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPEKFAAVIPYTTRPMRELEENGQNYWFTSREV----------------NV--GL 66 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~~~~~~v~~~tr~~~~~~~~~~~~~~~~~~~----------------~~--~~ 66 (91)
+|++++|+||||||||||+++|++.++. ....+.+++++++.++..+..|.|.+... .+ .+
T Consensus 19 ~Gei~~l~GpnGsGKSTLl~~l~gl~~~-i~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~l~~~~~~~~n~~~ 97 (207)
T 1znw_A 19 VGRVVVLSGPSAVGKSTVVRCLRERIPN-LHFSVSATTRAPRPGEVDGVDYHFIDPTRFQQLIDQGELLEWAEIHGGLHR 97 (207)
T ss_dssp CCCEEEEECSTTSSHHHHHHHHHHHSTT-CEECCCEESSCCCTTCCBTTTBEECCHHHHHHHHHTTCEEEEEEEGGGTEE
T ss_pred CCCEEEEECCCCCCHHHHHHHHHhhCCc-eEEcccccccCCcccccCCCeeEecCHHHHHHHHhcCCceeehhhcCchhh
Confidence 6899999999999999999999999863 33445566665544445566677655322 22 56
Q ss_pred cccCHHHHHHHHHhCCCeE
Q psy4405 67 AGTYIPMYHSEIRAYPPVE 85 (91)
Q Consensus 67 yg~~~~~i~~~~~~g~~~~ 85 (91)
||.+...+++.++++..++
T Consensus 98 ~g~~~~~~~~~~~~~~~~~ 116 (207)
T 1znw_A 98 SGTLAQPVRAAAATGVPVL 116 (207)
T ss_dssp EEEEHHHHHHHHHHTCCEE
T ss_pred cCCcHHHHHHHHHcCCeEE
Confidence 7777777777777775553
No 19
>3eph_A TRNA isopentenyltransferase; transferase, alternative initiation, ATP-binding, cytoplasm, mitochondrion, nucleotide-binding, nucleus; 2.95A {Saccharomyces cerevisiae} PDB: 3epj_A 3epk_A* 3epl_A*
Probab=99.42 E-value=2e-13 Score=94.71 Aligned_cols=81 Identities=17% Similarity=0.149 Sum_probs=65.1
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhCCcC--------ccccccccCCCCccchhcCCceEeeCccc------cccccccCH
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSNPEK--------FAAVIPYTTRPMRELEENGQNYWFTSREV------NVGLAGTYI 71 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~~~~--------~~~~v~~~tr~~~~~~~~~~~~~~~~~~~------~~~~yg~~~ 71 (91)
.++++|+||||||||||+..|+..++.. +-..++++|++++.+|..+.+|||++..+ .+.+.....
T Consensus 2 ~~~i~i~GptgsGKttla~~La~~~~~~iis~Ds~QvYr~l~i~T~kp~~~E~~gv~hhlid~~~~~~~~s~~~F~~~a~ 81 (409)
T 3eph_A 2 KKVIVIAGTTGVGKSQLSIQLAQKFNGEVINSDSMQVYKDIPIITNKHPLQEREGIPHHVMNHVDWSEEYYSHRFETECM 81 (409)
T ss_dssp CEEEEEEECSSSSHHHHHHHHHHHHTEEEEECCTTTTBSSCTTTTTCCCGGGTTTCCEESCSCBCTTSCCCHHHHHHHHH
T ss_pred CcEEEEECcchhhHHHHHHHHHHHCCCeEeecCccceecccccccCCCCHHHHcCchhhcCCccChHhHhhHHHHHHHHH
Confidence 3589999999999999999999887531 12235678999999999999999999777 334444556
Q ss_pred HHHHHHHHhCCCeEe
Q psy4405 72 PMYHSEIRAYPPVEI 86 (91)
Q Consensus 72 ~~i~~~~~~g~~~~~ 86 (91)
..++++..+|+.|+|
T Consensus 82 ~~i~~i~~~g~~pil 96 (409)
T 3eph_A 82 NAIEDIHRRGKIPIV 96 (409)
T ss_dssp HHHHHHHTTTCEEEE
T ss_pred HHHHHHHhcCCCEEE
Confidence 788999999998887
No 20
>3a8t_A Adenylate isopentenyltransferase; rossmann fold protein; HET: ATP; 2.37A {Humulus lupulus}
Probab=99.42 E-value=3.9e-13 Score=91.42 Aligned_cols=82 Identities=15% Similarity=0.097 Sum_probs=64.3
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCc--------CccccccccCCCCccchhcCCceEeeCcccc-c------ccccc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPE--------KFAAVIPYTTRPMRELEENGQNYWFTSREVN-V------GLAGT 69 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~--------~~~~~v~~~tr~~~~~~~~~~~~~~~~~~~~-~------~~yg~ 69 (91)
++++|+|+||+|||||||+..|++.++. ..-..++++|++++..|..+.+|||++..+. . .+...
T Consensus 39 ~~~lIvI~GPTgsGKTtLa~~LA~~l~~eiIs~Ds~qvYr~mdIgTakp~~eE~~gvphhlidi~~~~~e~~s~~~F~~~ 118 (339)
T 3a8t_A 39 KEKLLVLMGATGTGKSRLSIDLAAHFPLEVINSDKMQVYKGLDITTNKISVPDRGGVPHHLLGEVDPARGELTPADFRSL 118 (339)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHTTSCEEEEECCSSTTBSSCTTTTTCCCSGGGTTCCEESSSCBCGGGCCCCHHHHHHH
T ss_pred CCceEEEECCCCCCHHHHHHHHHHHCCCcEEcccccccccceeeecCCCCHHHHcCCCEeeccccCcccCccCHHHHHHH
Confidence 4568999999999999999999998863 1223456789999999999999999996653 3 34444
Q ss_pred CHHHHHHHHHhCCCeEe
Q psy4405 70 YIPMYHSEIRAYPPVEI 86 (91)
Q Consensus 70 ~~~~i~~~~~~g~~~~~ 86 (91)
..+.++++..+|+.|++
T Consensus 119 a~~~i~~i~~~g~~pIl 135 (339)
T 3a8t_A 119 AGKAVSEITGRRKLPVL 135 (339)
T ss_dssp HHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHhcCCeEEE
Confidence 45677788889998887
No 21
>3crm_A TRNA delta(2)-isopentenylpyrophosphate transferase; ATP-binding, nucleotide-binding, nucleotidyltransferase, tRNA processing; 1.90A {Pseudomonas aeruginosa} PDB: 3crq_A 3crr_A
Probab=99.36 E-value=7.5e-13 Score=89.55 Aligned_cols=86 Identities=10% Similarity=0.005 Sum_probs=63.3
Q ss_pred CCCCCCcEEEEEcCCCCCHHHHHHHHHhhCCcCc-c-------ccccccCCCCccchhcCCceEeeCccc------cccc
Q psy4405 1 MPPLKRKTIALVGCQGVGRRTLKARLINSNPEKF-A-------AVIPYTTRPMRELEENGQNYWFTSREV------NVGL 66 (91)
Q Consensus 1 m~~~~g~~i~l~GpsGaGKsTl~~~L~~~~~~~~-~-------~~v~~~tr~~~~~~~~~~~~~~~~~~~------~~~~ 66 (91)
|++ ..++++|+||+|||||||++.|++.+...+ . ...+++|++++..+..+.+|+|++..+ .+.+
T Consensus 1 ~~~-m~~~i~i~GptGsGKTtla~~La~~l~~~iis~Ds~qvy~~~~igTakp~~~e~~gvph~lid~~~~~~~~~~~~F 79 (323)
T 3crm_A 1 MSS-LPPAIFLMGPTAAGKTDLAMALADALPCELISVDSALIYRGMDIGTAKPSRELLARYPHRLIDIRDPAESYSAAEF 79 (323)
T ss_dssp --C-CCEEEEEECCTTSCHHHHHHHHHHHSCEEEEEECTTTTBTTCCTTTTCCCHHHHHHSCEETSSCBCTTSCCCHHHH
T ss_pred CCC-CCcEEEEECCCCCCHHHHHHHHHHHcCCcEEeccchhhhcCCCcccCCCCHHHHcCCCEEEeeccCcccccCHHHH
Confidence 555 456899999999999999999999885211 1 123567888888889999999998766 2334
Q ss_pred cccCHHHHHHHHHhCCCeEec
Q psy4405 67 AGTYIPMYHSEIRAYPPVEIP 87 (91)
Q Consensus 67 yg~~~~~i~~~~~~g~~~~~~ 87 (91)
.......+++++..|+.|++.
T Consensus 80 ~~~a~~~i~~i~~~g~~~Ilv 100 (323)
T 3crm_A 80 RADALAAMAKATARGRIPLLV 100 (323)
T ss_dssp HHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHcCCeEEEE
Confidence 444456788888899988763
No 22
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=99.22 E-value=1.1e-11 Score=85.69 Aligned_cols=67 Identities=7% Similarity=0.097 Sum_probs=56.4
Q ss_pred CCCCCcEEEEEcCCCCCHHHHHHHHHhhCCcCccccccccCCCCccchhcCCceEeeCccccccccccCHHHHHHHHHhC
Q psy4405 2 PPLKRKTIALVGCQGVGRRTLKARLINSNPEKFAAVIPYTTRPMRELEENGQNYWFTSREVNVGLAGTYIPMYHSEIRAY 81 (91)
Q Consensus 2 ~~~~g~~i~l~GpsGaGKsTl~~~L~~~~~~~~~~~v~~~tr~~~~~~~~~~~~~~~~~~~~~~~yg~~~~~i~~~~~~g 81 (91)
++..+++++|+|||| +||+++|...+|..|.. +||.++.+|.+|.+|+|+ +.+.+++++++|
T Consensus 228 ~~~~~r~iVlsGPsg---~tl~~~L~~~~p~~~~~----~tr~pR~gE~dG~~Y~Fv-----------~~~~V~~~~~~G 289 (391)
T 3tsz_A 228 EAGFLRPVTIFGPIA---DVAREKLAREEPDIYQI----AKSEPRDAGTDQRSSGII-----------RLHTIKQIIDQD 289 (391)
T ss_dssp ECSSCCCEEEESTTH---HHHHHHHHHHCTTTEEE----CCCCCCCSSSCCC--CCC-----------CHHHHHHHHTTT
T ss_pred CCCCCCEEEEECCCH---HHHHHHHHhhCcccccc----ccCCCCCcccCCccCCcC-----------cHHHHHHHHHcC
Confidence 455789999999998 89999999999865542 679999999999999987 688999999999
Q ss_pred CCeEe
Q psy4405 82 PPVEI 86 (91)
Q Consensus 82 ~~~~~ 86 (91)
++|+|
T Consensus 290 k~~iL 294 (391)
T 3tsz_A 290 KHALL 294 (391)
T ss_dssp CEEEE
T ss_pred CEEEE
Confidence 99987
No 23
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=99.19 E-value=9.2e-12 Score=87.72 Aligned_cols=67 Identities=7% Similarity=0.066 Sum_probs=49.0
Q ss_pred CCCCCcEEEEEcCCCCCHHHHHHHHHhhCCcCccccccccCCCCccchhcCCceEeeCccccccccccCHHHHHHHHHhC
Q psy4405 2 PPLKRKTIALVGCQGVGRRTLKARLINSNPEKFAAVIPYTTRPMRELEENGQNYWFTSREVNVGLAGTYIPMYHSEIRAY 81 (91)
Q Consensus 2 ~~~~g~~i~l~GpsGaGKsTl~~~L~~~~~~~~~~~v~~~tr~~~~~~~~~~~~~~~~~~~~~~~yg~~~~~i~~~~~~g 81 (91)
++..+++++|+||+|+| |+++|...+|..|.. .+|| ++.+|.+|++|+| ++.+.|++++++|
T Consensus 220 ~~~~~r~iVlsGPsG~G---l~~~Ll~~~p~~f~s---~~TR-pR~gE~dG~~Y~F-----------Ts~~~V~~vl~~G 281 (468)
T 3shw_A 220 EAGFLRPVTIFGPIADV---AREKLAREEPDIYQI---AKSE-PRDAGTDQRSSGI-----------IRLHTIKQIIDQD 281 (468)
T ss_dssp CCSSCCCEEEESTTHHH---HHHHHHHHCTTTEEE---CCCB-C----------CB-----------CCHHHHHHHHTTT
T ss_pred cCCCCCEEEEECCCHHH---HHHHHHHhCCCceee---ecCC-CCCcccccccCCc-----------ccHHHHHHHHHCC
Confidence 56688999999999999 999999999865543 4588 8999999999987 7899999999999
Q ss_pred CCeEe
Q psy4405 82 PPVEI 86 (91)
Q Consensus 82 ~~~~~ 86 (91)
++|+|
T Consensus 282 k~~iL 286 (468)
T 3shw_A 282 KHALL 286 (468)
T ss_dssp CEEEE
T ss_pred CeEEE
Confidence 99987
No 24
>3d3q_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2; 2.70A {Staphylococcus epidermidis atcc 12228}
Probab=99.17 E-value=5.9e-11 Score=80.77 Aligned_cols=81 Identities=12% Similarity=0.019 Sum_probs=59.0
Q ss_pred cEEEEEcCCCCCHHHHHHHHHhhCCc------Cc--cccccccCCCCccchhcCCceEeeCccc------cccccccCHH
Q psy4405 7 KTIALVGCQGVGRRTLKARLINSNPE------KF--AAVIPYTTRPMRELEENGQNYWFTSREV------NVGLAGTYIP 72 (91)
Q Consensus 7 ~~i~l~GpsGaGKsTl~~~L~~~~~~------~~--~~~v~~~tr~~~~~~~~~~~~~~~~~~~------~~~~yg~~~~ 72 (91)
++++|+||+|||||||++.|+..++. .+ -...+++|+++...+..+..+++++..+ ...+......
T Consensus 8 ~lI~I~GptgSGKTtla~~La~~l~~~iis~Ds~qvYr~~~i~Takp~~eE~~~v~hhl~di~~~~~~~~~~dF~~~a~~ 87 (340)
T 3d3q_A 8 FLIVIVGPTASGKTELSIEVAKKFNGEIISGDSMQVYQGMDIGTAKVTTEEMEGIPHYMIDILPPDASFSAYEFKKRAEK 87 (340)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHTTEEEEECCSSTTBTTCCTTTTCCCTTTTTTCCEESSSCBCTTSCCCHHHHHHHHHH
T ss_pred ceEEEECCCcCcHHHHHHHHHHHcCCceeccccccccccccccccCCCHHHHHHHHHHHHHHhCCccccCHHHHHHHHHH
Confidence 68999999999999999999998852 11 2234456788888888888999888666 2223333455
Q ss_pred HHHHHHHhCCCeEec
Q psy4405 73 MYHSEIRAYPPVEIP 87 (91)
Q Consensus 73 ~i~~~~~~g~~~~~~ 87 (91)
.+.+++..|+.|++-
T Consensus 88 ~i~~i~~~g~~~Ilv 102 (340)
T 3d3q_A 88 YIKDITRRGKVPIIA 102 (340)
T ss_dssp HHHHHHHTTCEEEEE
T ss_pred HHHHHHhCCCcEEEE
Confidence 667777788888763
No 25
>3rlf_A Maltose/maltodextrin import ATP-binding protein M; integral membrane protein, ATPase, ABC transporter, membrane transmembrane; HET: UMQ MAL PGV ANP; 2.20A {Escherichia coli} PDB: 1q1e_A 1q12_A* 2awo_A* 3fh6_A 3puv_A* 3puw_A* 3pux_A* 3puy_A* 3puz_A* 3pv0_A* 2awn_A* 2r6g_A* 1q1b_A
Probab=99.03 E-value=4.8e-10 Score=77.31 Aligned_cols=28 Identities=21% Similarity=0.334 Sum_probs=26.3
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
+|++++|+||||||||||+++|++..++
T Consensus 28 ~Ge~~~llGpsGsGKSTLLr~iaGl~~p 55 (381)
T 3rlf_A 28 EGEFVVFVGPSGCGKSTLLRMIAGLETI 55 (381)
T ss_dssp TTCEEEEECCTTSSHHHHHHHHHTSSCC
T ss_pred CCCEEEEEcCCCchHHHHHHHHHcCCCC
Confidence 6899999999999999999999999964
No 26
>3tif_A Uncharacterized ABC transporter ATP-binding prote; nucleotide-binding domain, ABC transporter ATPase; HET: ADP; 1.80A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID} PDB: 1l2t_A* 1f3o_A*
Probab=99.03 E-value=1.6e-10 Score=74.84 Aligned_cols=28 Identities=14% Similarity=0.266 Sum_probs=26.3
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
+|++++|+||||||||||+++|++.+++
T Consensus 30 ~Ge~~~iiG~nGsGKSTLl~~l~Gl~~p 57 (235)
T 3tif_A 30 EGEFVSIMGPSGSGKSTMLNIIGCLDKP 57 (235)
T ss_dssp TTCEEEEECSTTSSHHHHHHHHTTSSCC
T ss_pred CCCEEEEECCCCCcHHHHHHHHhcCCCC
Confidence 6999999999999999999999999874
No 27
>2ze6_A Isopentenyl transferase; crown GALL tumor, cytokinin biosynthesis; HET: DST AMP; 2.10A {Agrobacterium tumefaciens} PDB: 2ze5_A* 2ze7_A* 2ze8_A
Probab=99.03 E-value=2.5e-10 Score=74.43 Aligned_cols=80 Identities=9% Similarity=-0.029 Sum_probs=49.2
Q ss_pred cEEEEEcCCCCCHHHHHHHHHhhCCcC-ccc-------cccccCCCCccchhcCCceEeeCcccccc-ccc------cCH
Q psy4405 7 KTIALVGCQGVGRRTLKARLINSNPEK-FAA-------VIPYTTRPMRELEENGQNYWFTSREVNVG-LAG------TYI 71 (91)
Q Consensus 7 ~~i~l~GpsGaGKsTl~~~L~~~~~~~-~~~-------~v~~~tr~~~~~~~~~~~~~~~~~~~~~~-~yg------~~~ 71 (91)
++++|+||+|||||||++.|++.+... +.. ..+..|+++...+..+..++|++..+... .|+ ...
T Consensus 2 ~li~I~G~~GSGKSTla~~La~~~~~~~i~~D~~~~~~~~~~~t~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~f~~~~~ 81 (253)
T 2ze6_A 2 LLHLIYGPTCSGKTDMAIQIAQETGWPVVALDRVQCCPQIATGSGRPLESELQSTRRIYLDSRPLTEGILDAESAHRRLI 81 (253)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHHCCCEEECCSGGGCGGGTTTTTCCCGGGGTTCCEECSCCCCGGGCSCCHHHHHHHHH
T ss_pred eEEEEECCCCcCHHHHHHHHHhcCCCeEEeccHHhccCCCccccCCCCHHHHhCCCeEEEeeeccccccccHHHHHHHHH
Confidence 478999999999999999999876421 111 11234556666667777888877543111 121 223
Q ss_pred HHHHHHHHhCCCeEec
Q psy4405 72 PMYHSEIRAYPPVEIP 87 (91)
Q Consensus 72 ~~i~~~~~~g~~~~~~ 87 (91)
..+ +++..|+.+++.
T Consensus 82 ~~i-~~~~~g~~vIl~ 96 (253)
T 2ze6_A 82 FEV-DWRKSEEGLILE 96 (253)
T ss_dssp HHH-HTTTTSSEEEEE
T ss_pred HHH-HHHhCCCCeEEe
Confidence 334 445677776663
No 28
>2pcj_A ABC transporter, lipoprotein-releasing system ATP-binding protein; structural genomics; 1.70A {Aquifex aeolicus} PDB: 2pcl_A
Probab=99.00 E-value=2.1e-10 Score=73.77 Aligned_cols=28 Identities=25% Similarity=0.353 Sum_probs=26.2
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
+|++++|+||||||||||+++|++.+++
T Consensus 29 ~Ge~~~iiG~nGsGKSTLl~~l~Gl~~p 56 (224)
T 2pcj_A 29 KGEFVSIIGASGSGKSTLLYILGLLDAP 56 (224)
T ss_dssp TTCEEEEEECTTSCHHHHHHHHTTSSCC
T ss_pred CCCEEEEECCCCCCHHHHHHHHhcCCCC
Confidence 6899999999999999999999999864
No 29
>3asz_A Uridine kinase; cytidine phosphorylation, transferase; HET: C5P; 2.25A {Thermus thermophilus} PDB: 3asy_A*
Probab=99.00 E-value=1.7e-10 Score=72.62 Aligned_cols=31 Identities=26% Similarity=0.303 Sum_probs=25.2
Q ss_pred CCCCCCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 1 MPPLKRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 1 m~~~~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
|+..+|++++|+||||||||||+++|.+.+.
T Consensus 1 ~~~~~~~~i~i~G~~GsGKSTl~~~l~~~~~ 31 (211)
T 3asz_A 1 MSAPKPFVIGIAGGTASGKTTLAQALARTLG 31 (211)
T ss_dssp ----CCEEEEEEESTTSSHHHHHHHHHHHHG
T ss_pred CCCCCcEEEEEECCCCCCHHHHHHHHHHHhC
Confidence 6666889999999999999999999999764
No 30
>3gfo_A Cobalt import ATP-binding protein CBIO 1; structural genomics, cell membrane, cobalt transport, hydrolase, ION transport; 2.30A {Clostridium perfringens atcc 13124}
Probab=98.99 E-value=2.6e-10 Score=75.54 Aligned_cols=28 Identities=25% Similarity=0.367 Sum_probs=26.2
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
+|++++|+||||||||||+++|++.+++
T Consensus 33 ~Ge~~~iiGpnGsGKSTLl~~l~Gl~~p 60 (275)
T 3gfo_A 33 RGEVTAILGGNGVGKSTLFQNFNGILKP 60 (275)
T ss_dssp TTSEEEEECCTTSSHHHHHHHHTTSSCC
T ss_pred CCCEEEEECCCCCCHHHHHHHHHcCCCC
Confidence 5899999999999999999999999864
No 31
>1b0u_A Histidine permease; ABC transporter, transport protein; HET: ATP; 1.50A {Salmonella typhimurium} SCOP: c.37.1.12
Probab=98.99 E-value=3e-10 Score=74.63 Aligned_cols=28 Identities=18% Similarity=0.310 Sum_probs=26.2
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
+|++++|+||||||||||+++|++.+++
T Consensus 31 ~Ge~~~liG~nGsGKSTLlk~l~Gl~~p 58 (262)
T 1b0u_A 31 AGDVISIIGSSGSGKSTFLRCINFLEKP 58 (262)
T ss_dssp TTCEEEEECCTTSSHHHHHHHHTTSSCC
T ss_pred CCCEEEEECCCCCCHHHHHHHHhcCCCC
Confidence 6899999999999999999999999864
No 32
>4g1u_C Hemin import ATP-binding protein HMUV; membrane transporter, type II ABC importer, HMUT, plasma MEM transport protein-hydrolase complex; 3.01A {Yersinia pestis}
Probab=98.98 E-value=2.9e-10 Score=74.92 Aligned_cols=28 Identities=25% Similarity=0.376 Sum_probs=26.2
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
+|++++|+||||||||||+++|++.+++
T Consensus 36 ~Ge~~~liG~nGsGKSTLl~~l~Gl~~p 63 (266)
T 4g1u_C 36 SGEMVAIIGPNGAGKSTLLRLLTGYLSP 63 (266)
T ss_dssp TTCEEEEECCTTSCHHHHHHHHTSSSCC
T ss_pred CCCEEEEECCCCCcHHHHHHHHhcCCCC
Confidence 6899999999999999999999999864
No 33
>1g6h_A High-affinity branched-chain amino acid transport ATP-binding protein; beta-core domain; HET: ADP; 1.60A {Methanocaldococcus jannaschii} SCOP: c.37.1.12 PDB: 1gaj_A 1g9x_A*
Probab=98.98 E-value=3.1e-10 Score=74.29 Aligned_cols=28 Identities=21% Similarity=0.287 Sum_probs=26.2
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
+|++++|+||||||||||+++|++.+++
T Consensus 32 ~Ge~~~liG~nGsGKSTLlk~l~Gl~~p 59 (257)
T 1g6h_A 32 KGDVTLIIGPNGSGKSTLINVITGFLKA 59 (257)
T ss_dssp TTCEEEEECSTTSSHHHHHHHHTTSSCC
T ss_pred CCCEEEEECCCCCCHHHHHHHHhCCCCC
Confidence 6899999999999999999999999864
No 34
>2olj_A Amino acid ABC transporter; ABC domain, ATPase, hydrolase; HET: ADP; 2.05A {Geobacillus stearothermophilus} PDB: 2olk_A* 2ouk_A 2q0h_A* 3c4j_A* 3c41_J*
Probab=98.97 E-value=3.7e-10 Score=74.33 Aligned_cols=28 Identities=18% Similarity=0.239 Sum_probs=26.2
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
+|++++|+||||||||||+++|++.+++
T Consensus 49 ~Gei~~liG~NGsGKSTLlk~l~Gl~~p 76 (263)
T 2olj_A 49 EGEVVVVIGPSGSGKSTFLRCLNLLEDF 76 (263)
T ss_dssp TTCEEEEECCTTSSHHHHHHHHTTSSCC
T ss_pred CCCEEEEEcCCCCcHHHHHHHHHcCCCC
Confidence 6899999999999999999999999864
No 35
>1ji0_A ABC transporter; ATP binding protein, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: ATP; 2.00A {Thermotoga maritima} SCOP: c.37.1.12
Probab=98.97 E-value=3.5e-10 Score=73.36 Aligned_cols=28 Identities=18% Similarity=0.404 Sum_probs=26.2
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
+|++++|+||||||||||++.|++.+++
T Consensus 31 ~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p 58 (240)
T 1ji0_A 31 RGQIVTLIGANGAGKTTTLSAIAGLVRA 58 (240)
T ss_dssp TTCEEEEECSTTSSHHHHHHHHTTSSCC
T ss_pred CCCEEEEECCCCCCHHHHHHHHhCCCCC
Confidence 6899999999999999999999999864
No 36
>1zp6_A Hypothetical protein ATU3015; alpha-beta protein., structural genomics, PSI, protein struc initiative; 3.20A {Agrobacterium tumefaciens str} SCOP: c.37.1.25
Probab=98.97 E-value=3.9e-10 Score=69.77 Aligned_cols=28 Identities=29% Similarity=0.407 Sum_probs=25.1
Q ss_pred CCCCcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 3 PLKRKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 3 ~~~g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-.+|++++|+||||||||||+++|++..
T Consensus 6 i~~g~~i~l~G~~GsGKSTl~~~La~~~ 33 (191)
T 1zp6_A 6 DLGGNILLLSGHPGSGKSTIAEALANLP 33 (191)
T ss_dssp CCTTEEEEEEECTTSCHHHHHHHHHTCS
T ss_pred CCCCeEEEEECCCCCCHHHHHHHHHhcc
Confidence 3468999999999999999999999874
No 37
>4eun_A Thermoresistant glucokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Janibacter SP}
Probab=98.96 E-value=3.2e-10 Score=71.14 Aligned_cols=30 Identities=17% Similarity=0.409 Sum_probs=24.5
Q ss_pred CCCCCCcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 1 MPPLKRKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 1 m~~~~g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
|+..+|++++|+||||||||||+++|.+.+
T Consensus 24 m~~~~g~~i~l~G~~GsGKSTl~~~L~~~~ 53 (200)
T 4eun_A 24 MTGEPTRHVVVMGVSGSGKTTIAHGVADET 53 (200)
T ss_dssp ----CCCEEEEECCTTSCHHHHHHHHHHHH
T ss_pred hcCCCCcEEEEECCCCCCHHHHHHHHHHhh
Confidence 445578999999999999999999999876
No 38
>1vpl_A ABC transporter, ATP-binding protein; TM0544, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.10A {Thermotoga maritima} SCOP: c.37.1.12
Probab=98.96 E-value=4.2e-10 Score=73.77 Aligned_cols=28 Identities=18% Similarity=0.252 Sum_probs=26.2
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
+|++++|+||||||||||+++|++.+++
T Consensus 40 ~Gei~~l~G~NGsGKSTLlk~l~Gl~~p 67 (256)
T 1vpl_A 40 EGEIFGLIGPNGAGKTTTLRIISTLIKP 67 (256)
T ss_dssp TTCEEEEECCTTSSHHHHHHHHTTSSCC
T ss_pred CCcEEEEECCCCCCHHHHHHHHhcCCCC
Confidence 6899999999999999999999999864
No 39
>2pze_A Cystic fibrosis transmembrane conductance regulat; NBD, ABC transporter, CFTR, hydrolase; HET: ATP; 1.70A {Homo sapiens} PDB: 2pzg_A* 2pzf_A* 1ckx_A 1cky_A 1ckw_A 1ckz_A
Probab=98.96 E-value=4.2e-10 Score=72.53 Aligned_cols=28 Identities=18% Similarity=0.411 Sum_probs=26.1
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
+|++++|+||||||||||++.|++.+++
T Consensus 33 ~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p 60 (229)
T 2pze_A 33 RGQLLAVAGSTGAGKTSLLMMIMGELEP 60 (229)
T ss_dssp TTCEEEEECCTTSSHHHHHHHHTTSSCC
T ss_pred CCCEEEEECCCCCCHHHHHHHHhCCCcC
Confidence 6899999999999999999999999864
No 40
>1htw_A HI0065; nucleotide-binding fold, structural genomics, structure 2 function project, S2F, unknown function; HET: ADP; 1.70A {Haemophilus influenzae} SCOP: c.37.1.18 PDB: 1fl9_A
Probab=98.96 E-value=4.8e-10 Score=68.79 Aligned_cols=27 Identities=26% Similarity=0.341 Sum_probs=25.5
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
+|++++|+||||||||||++.|++.++
T Consensus 32 ~Ge~v~L~G~nGaGKTTLlr~l~g~l~ 58 (158)
T 1htw_A 32 KAIMVYLNGDLGAGKTTLTRGMLQGIG 58 (158)
T ss_dssp SCEEEEEECSTTSSHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHhCC
Confidence 589999999999999999999999984
No 41
>1sgw_A Putative ABC transporter; structural genomics, P protein structure initiative, southeast collaboratory for S genomics, secsg; 1.70A {Pyrococcus furiosus} SCOP: c.37.1.12
Probab=98.96 E-value=3.5e-10 Score=72.44 Aligned_cols=28 Identities=21% Similarity=0.336 Sum_probs=26.1
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
+|++++|+||||||||||+++|++.+++
T Consensus 34 ~Ge~~~iiG~NGsGKSTLlk~l~Gl~~p 61 (214)
T 1sgw_A 34 KGNVVNFHGPNGIGKTTLLKTISTYLKP 61 (214)
T ss_dssp TTCCEEEECCTTSSHHHHHHHHTTSSCC
T ss_pred CCCEEEEECCCCCCHHHHHHHHhcCCCC
Confidence 6899999999999999999999999864
No 42
>2ff7_A Alpha-hemolysin translocation ATP-binding protein HLYB; ABC-transporter, transport protein; HET: ADP; 1.60A {Escherichia coli} SCOP: c.37.1.12 PDB: 2ffb_A* 2fgk_A* 2ffa_A* 2fgj_A* 2pmk_A* 3b5j_A* 1mt0_A 1xef_A*
Probab=98.96 E-value=4.4e-10 Score=73.26 Aligned_cols=28 Identities=25% Similarity=0.354 Sum_probs=26.2
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
+|++++|+||||||||||+++|++.+++
T Consensus 34 ~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p 61 (247)
T 2ff7_A 34 QGEVIGIVGRSGSGKSTLTKLIQRFYIP 61 (247)
T ss_dssp TTCEEEEECSTTSSHHHHHHHHTTSSCC
T ss_pred CCCEEEEECCCCCCHHHHHHHHhcCCCC
Confidence 6899999999999999999999999864
No 43
>1v43_A Sugar-binding transport ATP-binding protein; ATPase, active transport, sugar uptake and regulation, transport protein; 2.20A {Pyrococcus horikoshii} SCOP: b.40.6.3 b.40.6.3 c.37.1.12 PDB: 1vci_A*
Probab=98.95 E-value=1.6e-09 Score=74.44 Aligned_cols=28 Identities=18% Similarity=0.283 Sum_probs=26.2
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
+|++++|+||||||||||+++|++.+++
T Consensus 36 ~Ge~~~llGpnGsGKSTLLr~iaGl~~p 63 (372)
T 1v43_A 36 DGEFLVLLGPSGCGKTTTLRMIAGLEEP 63 (372)
T ss_dssp TTCEEEEECCTTSSHHHHHHHHHTSSCC
T ss_pred CCCEEEEECCCCChHHHHHHHHHcCCCC
Confidence 6899999999999999999999999864
No 44
>2ihy_A ABC transporter, ATP-binding protein; ATPase, ABC cassette, hydrolase; HET: MSE; 1.90A {Staphylococcus aureus}
Probab=98.95 E-value=4.7e-10 Score=74.37 Aligned_cols=28 Identities=32% Similarity=0.405 Sum_probs=26.2
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
+|++++|+||||||||||+++|++.+++
T Consensus 46 ~Ge~~~liG~NGsGKSTLlk~l~Gl~~p 73 (279)
T 2ihy_A 46 KGDKWILYGLNGAGKTTLLNILNAYEPA 73 (279)
T ss_dssp TTCEEEEECCTTSSHHHHHHHHTTSSCC
T ss_pred CCCEEEEECCCCCcHHHHHHHHhCCCCC
Confidence 6899999999999999999999999864
No 45
>2qi9_C Vitamin B12 import ATP-binding protein BTUD; inner membrane, membrane, transmembrane, transport, ATP- binding, hydrolase, nucleotide-binding, periplasm; HET: 1PE; 2.60A {Escherichia coli} PDB: 1l7v_C* 4dbl_C
Probab=98.95 E-value=5.1e-10 Score=73.13 Aligned_cols=29 Identities=34% Similarity=0.511 Sum_probs=26.7
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCcC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPEK 33 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~~ 33 (91)
+|++++|+||||||||||+++|++.+++.
T Consensus 25 ~Ge~~~liG~NGsGKSTLlk~l~Gl~~p~ 53 (249)
T 2qi9_C 25 AGEILHLVGPNGAGKSTLLARMAGMTSGK 53 (249)
T ss_dssp TTCEEEEECCTTSSHHHHHHHHTTSSCCE
T ss_pred CCCEEEEECCCCCcHHHHHHHHhCCCCCC
Confidence 68999999999999999999999998743
No 46
>1mv5_A LMRA, multidrug resistance ABC transporter ATP-binding and permease protein; asymmetric dimer, tetramer, P-glycoprotein; HET: ATP ADP; 3.10A {Lactococcus lactis} SCOP: c.37.1.12
Probab=98.94 E-value=6.3e-10 Score=72.21 Aligned_cols=28 Identities=25% Similarity=0.256 Sum_probs=26.2
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
+|++++|+||||||||||+++|++.+++
T Consensus 27 ~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p 54 (243)
T 1mv5_A 27 PNSIIAFAGPSGGGKSTIFSLLERFYQP 54 (243)
T ss_dssp TTEEEEEECCTTSSHHHHHHHHTTSSCC
T ss_pred CCCEEEEECCCCCCHHHHHHHHhcCCCC
Confidence 6899999999999999999999999864
No 47
>1gvn_B Zeta; postsegregational killing system, plasmid; 1.95A {Streptococcus pyogenes} SCOP: c.37.1.21 PDB: 3q8x_B*
Probab=98.94 E-value=2.6e-10 Score=75.64 Aligned_cols=82 Identities=11% Similarity=0.054 Sum_probs=48.6
Q ss_pred CCCcEEEEEcCCCCCHHHHHHHHHhhCCcCccccccc-cCCCCccchhcCCceEeeCc--ccccccccc-CHHHHHHHHH
Q psy4405 4 LKRKTIALVGCQGVGRRTLKARLINSNPEKFAAVIPY-TTRPMRELEENGQNYWFTSR--EVNVGLAGT-YIPMYHSEIR 79 (91)
Q Consensus 4 ~~g~~i~l~GpsGaGKsTl~~~L~~~~~~~~~~~v~~-~tr~~~~~~~~~~~~~~~~~--~~~~~~yg~-~~~~i~~~~~ 79 (91)
.++.+++|+|||||||||+++.|...++. ....++. +.|....+...-.. .+... +..+.+|+. ....+++.++
T Consensus 31 ~~~~livl~G~sGsGKSTla~~L~~~~~~-~~~~Is~D~~R~~~~~~~~~~~-~~~~~a~~~~~~~~~~~~~~~v~~~l~ 108 (287)
T 1gvn_B 31 ESPTAFLLGGQPGSGKTSLRSAIFEETQG-NVIVIDNDTFKQQHPNFDELVK-LYEKDVVKHVTPYSNRMTEAIISRLSD 108 (287)
T ss_dssp SSCEEEEEECCTTSCTHHHHHHHHHHTTT-CCEEECTHHHHTTSTTHHHHHH-HHGGGCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHhCC-CeEEEechHhHHhchhhHHHHH-HccchhhhhhhHHHHHHHHHHHHHHHh
Confidence 35779999999999999999999987742 2233433 33433221100000 01011 113456666 3456778888
Q ss_pred hCCCeEec
Q psy4405 80 AYPPVEIP 87 (91)
Q Consensus 80 ~g~~~~~~ 87 (91)
.|+.+++-
T Consensus 109 ~g~~vIld 116 (287)
T 1gvn_B 109 QGYNLVIE 116 (287)
T ss_dssp HTCCEEEC
T ss_pred cCCeEEEE
Confidence 89888874
No 48
>1z47_A CYSA, putative ABC-transporter ATP-binding protein; alpha/beta motif, beta sandwich, ligand binding protein; 1.90A {Alicyclobacillus acidocaldarius}
Probab=98.94 E-value=1e-09 Score=75.05 Aligned_cols=28 Identities=18% Similarity=0.344 Sum_probs=26.2
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
+|++++|+||||||||||+++|++..++
T Consensus 40 ~Ge~~~llGpnGsGKSTLLr~iaGl~~p 67 (355)
T 1z47_A 40 EGEMVGLLGPSGSGKTTILRLIAGLERP 67 (355)
T ss_dssp TTCEEEEECSTTSSHHHHHHHHHTSSCC
T ss_pred CCCEEEEECCCCCcHHHHHHHHhCCCCC
Confidence 6899999999999999999999999864
No 49
>2ixe_A Antigen peptide transporter 1; ABC ATPase, hydrolase; HET: ATP; 2.0A {Rattus norvegicus} PDB: 2ixg_A* 2ixf_A* 1jj7_A*
Probab=98.94 E-value=5.9e-10 Score=73.54 Aligned_cols=28 Identities=39% Similarity=0.424 Sum_probs=26.2
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
+|++++|+||||||||||+++|++.+++
T Consensus 44 ~Ge~~~i~G~nGsGKSTLlk~l~Gl~~p 71 (271)
T 2ixe_A 44 PGKVTALVGPNGSGKSTVAALLQNLYQP 71 (271)
T ss_dssp TTCEEEEECSTTSSHHHHHHHHTTSSCC
T ss_pred CCCEEEEECCCCCCHHHHHHHHhcCCCC
Confidence 6899999999999999999999999864
No 50
>2yz2_A Putative ABC transporter ATP-binding protein TM_0; cobalt transport, TM02 hydrolase, inner membrane, membrane, nucleotide-binding; 2.30A {Thermotoga maritima}
Probab=98.93 E-value=6e-10 Score=73.26 Aligned_cols=28 Identities=18% Similarity=0.254 Sum_probs=26.2
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
+|++++|+||||||||||+++|++.+++
T Consensus 32 ~Ge~~~liG~nGsGKSTLl~~i~Gl~~p 59 (266)
T 2yz2_A 32 EGECLLVAGNTGSGKSTLLQIVAGLIEP 59 (266)
T ss_dssp TTCEEEEECSTTSSHHHHHHHHTTSSCC
T ss_pred CCCEEEEECCCCCcHHHHHHHHhCCCCC
Confidence 6899999999999999999999999864
No 51
>2yyz_A Sugar ABC transporter, ATP-binding protein; sugar transport, alpha and beta proteins (A/B) TM0421, structural genomics, NPPSFA; 2.11A {Thermotoga maritima}
Probab=98.93 E-value=1.1e-09 Score=74.91 Aligned_cols=28 Identities=25% Similarity=0.296 Sum_probs=26.2
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
+|++++|+||||||||||+++|++..++
T Consensus 28 ~Ge~~~llGpnGsGKSTLLr~iaGl~~p 55 (359)
T 2yyz_A 28 DGEFVALLGPSGCGKTTTLLMLAGIYKP 55 (359)
T ss_dssp TTCEEEEECSTTSSHHHHHHHHHTSSCC
T ss_pred CCCEEEEEcCCCchHHHHHHHHHCCCCC
Confidence 6899999999999999999999999864
No 52
>2cbz_A Multidrug resistance-associated protein 1; ABC proteins, MRP1/ABCC1, nucleotide-binding domain, ATP- binding, hydrolysis, transport; HET: ATP; 1.5A {Homo sapiens}
Probab=98.93 E-value=5e-10 Score=72.54 Aligned_cols=28 Identities=25% Similarity=0.436 Sum_probs=26.0
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
+|++++|+||||||||||++.|++.+++
T Consensus 30 ~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p 57 (237)
T 2cbz_A 30 EGALVAVVGQVGCGKSSLLSALLAEMDK 57 (237)
T ss_dssp TTCEEEEECSTTSSHHHHHHHHTTCSEE
T ss_pred CCCEEEEECCCCCCHHHHHHHHhcCCCC
Confidence 6899999999999999999999999863
No 53
>2nq2_C Hypothetical ABC transporter ATP-binding protein HI1470; putative iron chelatin ABC transporter, nucleotide binding domain; 2.40A {Haemophilus influenzae}
Probab=98.93 E-value=6.3e-10 Score=72.78 Aligned_cols=28 Identities=29% Similarity=0.461 Sum_probs=26.1
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
+|++++|+||||||||||+++|++.+++
T Consensus 30 ~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p 57 (253)
T 2nq2_C 30 KGDILAVLGQNGCGKSTLLDLLLGIHRP 57 (253)
T ss_dssp TTCEEEEECCSSSSHHHHHHHHTTSSCC
T ss_pred CCCEEEEECCCCCCHHHHHHHHhCCCCC
Confidence 6899999999999999999999999864
No 54
>3fvq_A Fe(3+) IONS import ATP-binding protein FBPC; nucleotide binding domain, ABC motor domain, ferric iron TRA ATP-binding, cell inner membrane; HET: ATP; 1.90A {Neisseria gonorrhoeae}
Probab=98.92 E-value=7.3e-10 Score=75.87 Aligned_cols=28 Identities=21% Similarity=0.370 Sum_probs=26.3
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
+|++++|+||||||||||+++|++..++
T Consensus 29 ~Ge~~~llGpsGsGKSTLLr~iaGl~~p 56 (359)
T 3fvq_A 29 PGEILFIIGASGCGKTTLLRCLAGFEQP 56 (359)
T ss_dssp TTCEEEEEESTTSSHHHHHHHHHTSSCC
T ss_pred CCCEEEEECCCCchHHHHHHHHhcCCCC
Confidence 6899999999999999999999999864
No 55
>2ghi_A Transport protein; multidrug resistance protein, MDR, structural genomics, structural genomics consortium, SGC; 2.20A {Plasmodium yoelii yoelii str}
Probab=98.92 E-value=7.5e-10 Score=72.62 Aligned_cols=28 Identities=32% Similarity=0.375 Sum_probs=26.1
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
+|++++|+||||||||||+++|++.++.
T Consensus 45 ~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~ 72 (260)
T 2ghi_A 45 SGTTCALVGHTGSGKSTIAKLLYRFYDA 72 (260)
T ss_dssp TTCEEEEECSTTSSHHHHHHHHTTSSCC
T ss_pred CCCEEEEECCCCCCHHHHHHHHhccCCC
Confidence 6899999999999999999999999863
No 56
>2it1_A 362AA long hypothetical maltose/maltodextrin transport ATP-binding protein; structural genomics, NPPSFA; 1.94A {Pyrococcus horikoshii}
Probab=98.91 E-value=1.4e-09 Score=74.53 Aligned_cols=28 Identities=25% Similarity=0.331 Sum_probs=26.2
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
+|++++|+||||||||||+++|++..++
T Consensus 28 ~Ge~~~llGpnGsGKSTLLr~iaGl~~p 55 (362)
T 2it1_A 28 DGEFMALLGPSGSGKSTLLYTIAGIYKP 55 (362)
T ss_dssp TTCEEEEECCTTSSHHHHHHHHHTSSCC
T ss_pred CCCEEEEECCCCchHHHHHHHHhcCCCC
Confidence 6899999999999999999999999864
No 57
>3c8u_A Fructokinase; YP_612366.1, putative fructose transport system kinase, STRU genomics, joint center for structural genomics, JCSG; 1.95A {Silicibacter SP}
Probab=98.91 E-value=6.2e-10 Score=70.28 Aligned_cols=28 Identities=32% Similarity=0.458 Sum_probs=25.6
Q ss_pred CCCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 4 LKRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 4 ~~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
.+|++++|+||||||||||+++|.+.++
T Consensus 20 ~~g~~v~I~G~sGsGKSTl~~~l~~~~~ 47 (208)
T 3c8u_A 20 PGRQLVALSGAPGSGKSTLSNPLAAALS 47 (208)
T ss_dssp CSCEEEEEECCTTSCTHHHHHHHHHHHH
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHHh
Confidence 3688999999999999999999999875
No 58
>3tui_C Methionine import ATP-binding protein METN; ABC-transporter, type I ABC type importer, methionine uptake transporter, membrane protein; HET: ADP; 2.90A {Escherichia coli} PDB: 3tuj_C 3tuz_C* 3dhw_C
Probab=98.90 E-value=1.1e-09 Score=75.26 Aligned_cols=28 Identities=18% Similarity=0.267 Sum_probs=26.3
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
+|++++|+||||||||||+++|.+..++
T Consensus 53 ~Gei~~IiGpnGaGKSTLlr~i~GL~~p 80 (366)
T 3tui_C 53 AGQIYGVIGASGAGKSTLIRCVNLLERP 80 (366)
T ss_dssp TTCEEEEECCTTSSHHHHHHHHHTSSCC
T ss_pred CCCEEEEEcCCCchHHHHHHHHhcCCCC
Confidence 6999999999999999999999999864
No 59
>1qhx_A CPT, protein (chloramphenicol phosphotransferase); kinase, antibiotic resistance, phosphorylation, mononucleoti binding fold; HET: ATP; 2.50A {Streptomyces venezuelae} SCOP: c.37.1.3 PDB: 1grr_A* 1grq_A 1qhs_A* 1qhn_A* 1qhy_A*
Probab=98.90 E-value=1.1e-09 Score=66.98 Aligned_cols=26 Identities=23% Similarity=0.323 Sum_probs=24.1
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
+.+|+|+|++||||||+++.|.+.++
T Consensus 3 ~~~i~l~G~~GsGKST~a~~La~~l~ 28 (178)
T 1qhx_A 3 TRMIILNGGSSAGKSGIVRCLQSVLP 28 (178)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHHSS
T ss_pred ceEEEEECCCCCCHHHHHHHHHHhcC
Confidence 56899999999999999999999875
No 60
>2zu0_C Probable ATP-dependent transporter SUFC; iron-sulfur cluster, ABC-ATPase, ATP-binding, cytoplasm, nucleotide-binding; HET: MES; 2.20A {Escherichia coli} PDB: 2d3w_A
Probab=98.88 E-value=1.2e-09 Score=71.87 Aligned_cols=26 Identities=31% Similarity=0.465 Sum_probs=24.5
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
+|++++|+||||||||||+++|++..
T Consensus 45 ~Ge~~~l~G~NGsGKSTLlk~l~Gl~ 70 (267)
T 2zu0_C 45 PGEVHAIMGPNGSGKSTLSATLAGRE 70 (267)
T ss_dssp TTCEEEEECCTTSSHHHHHHHHHTCT
T ss_pred CCCEEEEECCCCCCHHHHHHHHhCCC
Confidence 68999999999999999999999984
No 61
>2d2e_A SUFC protein; ABC-ATPase, SUF protein, 310-helix, riken structural genomics/proteomics initiative, RSGI, structural genomics, binding; 1.70A {Thermus thermophilus} PDB: 2d2f_A*
Probab=98.88 E-value=1.1e-09 Score=71.33 Aligned_cols=25 Identities=36% Similarity=0.480 Sum_probs=24.0
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhh
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINS 29 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~ 29 (91)
+|++++|+||||||||||++.|++.
T Consensus 28 ~Ge~~~l~G~nGsGKSTLlk~l~Gl 52 (250)
T 2d2e_A 28 KGEVHALMGPNGAGKSTLGKILAGD 52 (250)
T ss_dssp TTCEEEEECSTTSSHHHHHHHHHTC
T ss_pred CCCEEEEECCCCCCHHHHHHHHhCC
Confidence 6899999999999999999999997
No 62
>2onk_A Molybdate/tungstate ABC transporter, ATP-binding protein; membrane protein; 3.10A {Archaeoglobus fulgidus} SCOP: c.37.1.12
Probab=98.88 E-value=1.4e-09 Score=70.60 Aligned_cols=26 Identities=15% Similarity=0.229 Sum_probs=24.4
Q ss_pred cEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 7 KTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 7 ~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
++++|+||||||||||+++|++.+++
T Consensus 25 e~~~liG~nGsGKSTLl~~l~Gl~~p 50 (240)
T 2onk_A 25 DYCVLLGPTGAGKSVFLELIAGIVKP 50 (240)
T ss_dssp SEEEEECCTTSSHHHHHHHHHTSSCC
T ss_pred EEEEEECCCCCCHHHHHHHHhCCCCC
Confidence 79999999999999999999999864
No 63
>1g29_1 MALK, maltose transport protein MALK; ATPase, active transport, maltose uptake and regulation, sugar binding protein; 1.90A {Thermococcus litoralis} SCOP: b.40.6.3 b.40.6.3 c.37.1.12 PDB: 2d62_A
Probab=98.87 E-value=1.4e-09 Score=74.71 Aligned_cols=28 Identities=18% Similarity=0.268 Sum_probs=26.2
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
+|++++|+||||||||||+++|++..++
T Consensus 28 ~Ge~~~llGpnGsGKSTLLr~iaGl~~p 55 (372)
T 1g29_1 28 DGEFMILLGPSGCGKTTTLRMIAGLEEP 55 (372)
T ss_dssp TTCEEEEECSTTSSHHHHHHHHHTSSCC
T ss_pred CCCEEEEECCCCcHHHHHHHHHHcCCCC
Confidence 6899999999999999999999999864
No 64
>4gp7_A Metallophosphoesterase; polynucleotide kinase phosphatase, RNA repair, transferase; HET: ATP CIT; 2.00A {Clostridium thermocellum} PDB: 4gp6_A*
Probab=98.87 E-value=1.4e-09 Score=66.95 Aligned_cols=21 Identities=24% Similarity=0.574 Sum_probs=19.8
Q ss_pred CCcEEEEEcCCCCCHHHHHHH
Q psy4405 5 KRKTIALVGCQGVGRRTLKAR 25 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~ 25 (91)
+|++++|+||||||||||+++
T Consensus 8 ~gei~~l~G~nGsGKSTl~~~ 28 (171)
T 4gp7_A 8 ELSLVVLIGSSGSGKSTFAKK 28 (171)
T ss_dssp SSEEEEEECCTTSCHHHHHHH
T ss_pred CCEEEEEECCCCCCHHHHHHH
Confidence 589999999999999999994
No 65
>2bbs_A Cystic fibrosis transmembrane conductance regulator; ATP binding cassette, transport protein; HET: ATP; 2.05A {Homo sapiens} PDB: 2bbt_A* 1xmi_A* 1xmj_A* 2bbo_A* 3si7_A* 1r0w_A 1q3h_A 1r0x_A* 1r0y_A* 1r0z_A* 1r10_A* 1xf9_A* 1xfa_A*
Probab=98.87 E-value=1.3e-09 Score=72.60 Aligned_cols=28 Identities=18% Similarity=0.411 Sum_probs=26.1
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
+|++++|+||||||||||+++|++.+++
T Consensus 63 ~Ge~~~i~G~NGsGKSTLlk~l~Gl~~p 90 (290)
T 2bbs_A 63 RGQLLAVAGSTGAGKTSLLMMIMGELEP 90 (290)
T ss_dssp TTCEEEEEESTTSSHHHHHHHHTTSSCE
T ss_pred CCCEEEEECCCCCcHHHHHHHHhcCCCC
Confidence 6899999999999999999999999863
No 66
>3ozx_A RNAse L inhibitor; ATP binding cassette protein, hydrolase, translation; HET: ADP; 2.05A {Sulfolobus solfataricus}
Probab=98.86 E-value=1.7e-09 Score=77.30 Aligned_cols=28 Identities=21% Similarity=0.340 Sum_probs=26.3
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
+|++++|+||||||||||+++|++.+.+
T Consensus 24 ~Gei~gLiGpNGaGKSTLlkiL~Gl~~p 51 (538)
T 3ozx_A 24 NNTILGVLGKNGVGKTTVLKILAGEIIP 51 (538)
T ss_dssp TTEEEEEECCTTSSHHHHHHHHTTSSCC
T ss_pred CCCEEEEECCCCCcHHHHHHHHhcCCCC
Confidence 7999999999999999999999998854
No 67
>3d31_A Sulfate/molybdate ABC transporter, ATP-binding protein; ATP-binding, nucleotide-binding, membrane, transmembrane, transport protein; 3.00A {Methanosarcina acetivorans} SCOP: b.40.6.3 c.37.1.12
Probab=98.85 E-value=1.2e-09 Score=74.56 Aligned_cols=28 Identities=11% Similarity=0.220 Sum_probs=26.2
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
+|++++|+||||||||||+++|++..++
T Consensus 25 ~Ge~~~llGpnGsGKSTLLr~iaGl~~p 52 (348)
T 3d31_A 25 SGEYFVILGPTGAGKTLFLELIAGFHVP 52 (348)
T ss_dssp TTCEEEEECCCTHHHHHHHHHHHTSSCC
T ss_pred CCCEEEEECCCCccHHHHHHHHHcCCCC
Confidence 6899999999999999999999999864
No 68
>1knq_A Gluconate kinase; ALFA/beta structure, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.17 PDB: 1ko1_A 1ko4_A 1ko5_A* 1ko8_A* 1kof_A*
Probab=98.85 E-value=2.7e-09 Score=65.28 Aligned_cols=29 Identities=14% Similarity=0.321 Sum_probs=25.6
Q ss_pred CCCCCcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 2 PPLKRKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 2 ~~~~g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
+..+|++++|+|||||||||+++.|.+.+
T Consensus 4 ~~~~g~~i~l~G~~GsGKSTl~~~l~~~~ 32 (175)
T 1knq_A 4 TNHDHHIYVLMGVSGSGKSAVASEVAHQL 32 (175)
T ss_dssp CCTTSEEEEEECSTTSCHHHHHHHHHHHH
T ss_pred cCCCCcEEEEEcCCCCCHHHHHHHHHHhh
Confidence 44568999999999999999999998865
No 69
>3b85_A Phosphate starvation-inducible protein; PHOH2, ATPase, PFAM: PF02562, ST genomics, PSI-2, protein structure initiative; 2.35A {Corynebacterium glutamicum atcc 13032}
Probab=98.84 E-value=1.3e-09 Score=69.47 Aligned_cols=26 Identities=15% Similarity=0.155 Sum_probs=24.3
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
+|++++|+||||||||||+++|++. +
T Consensus 21 ~Ge~~~liG~nGsGKSTLl~~l~Gl-~ 46 (208)
T 3b85_A 21 TNTIVFGLGPAGSGKTYLAMAKAVQ-A 46 (208)
T ss_dssp HCSEEEEECCTTSSTTHHHHHHHHH-H
T ss_pred CCCEEEEECCCCCCHHHHHHHHhcC-C
Confidence 4889999999999999999999998 5
No 70
>3nh6_A ATP-binding cassette SUB-family B member 6, mitoc; ABC-transporter, ABCB6, nucleotide binding domain, heme BIOS transport protein; 2.00A {Homo sapiens} PDB: 3nh9_A* 3nha_A* 3nhb_A*
Probab=98.83 E-value=1.3e-09 Score=73.24 Aligned_cols=28 Identities=32% Similarity=0.389 Sum_probs=26.2
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
+|++++|+||||||||||+++|++.+++
T Consensus 79 ~Ge~vaivG~sGsGKSTLl~ll~gl~~p 106 (306)
T 3nh6_A 79 PGQTLALVGPSGAGKSTILRLLFRFYDI 106 (306)
T ss_dssp TTCEEEEESSSCHHHHHHHHHHTTSSCC
T ss_pred CCCEEEEECCCCchHHHHHHHHHcCCCC
Confidence 5999999999999999999999999864
No 71
>1oxx_K GLCV, glucose, ABC transporter, ATP binding protein; ABC-ATPase, ATP-binding cassette, ATPase, transport protein; 1.45A {Sulfolobus solfataricus} SCOP: b.40.6.3 c.37.1.12 PDB: 1oxs_C 1oxt_A 1oxu_A* 1oxv_A*
Probab=98.83 E-value=1.1e-09 Score=74.82 Aligned_cols=28 Identities=14% Similarity=0.319 Sum_probs=26.2
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
+|++++|+||||||||||+++|++..++
T Consensus 30 ~Ge~~~llGpnGsGKSTLLr~iaGl~~p 57 (353)
T 1oxx_K 30 NGERFGILGPSGAGKTTFMRIIAGLDVP 57 (353)
T ss_dssp TTCEEEEECSCHHHHHHHHHHHHTSSCC
T ss_pred CCCEEEEECCCCCcHHHHHHHHhCCCCC
Confidence 6899999999999999999999999864
No 72
>1kag_A SKI, shikimate kinase I; transferase, structural genomics, PSI, protein structure initiative; 2.05A {Escherichia coli} SCOP: c.37.1.2
Probab=98.82 E-value=2.7e-09 Score=65.01 Aligned_cols=26 Identities=31% Similarity=0.496 Sum_probs=24.1
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
+++++|+||+||||||+++.|++.+.
T Consensus 4 ~~~i~l~G~~GsGKSTl~~~La~~l~ 29 (173)
T 1kag_A 4 KRNIFLVGPMGAGKSTIGRQLAQQLN 29 (173)
T ss_dssp CCCEEEECCTTSCHHHHHHHHHHHTT
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHhC
Confidence 67899999999999999999999874
No 73
>2bdt_A BH3686; alpha-beta protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG, function; 2.40A {Bacillus halodurans} SCOP: c.37.1.25
Probab=98.81 E-value=2.6e-09 Score=66.15 Aligned_cols=26 Identities=31% Similarity=0.391 Sum_probs=23.4
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
|++++|+||||||||||++.|++.+.
T Consensus 2 g~ii~l~G~~GaGKSTl~~~L~~~~~ 27 (189)
T 2bdt_A 2 KKLYIITGPAGVGKSTTCKRLAAQLD 27 (189)
T ss_dssp EEEEEEECSTTSSHHHHHHHHHHHSS
T ss_pred CeEEEEECCCCCcHHHHHHHHhcccC
Confidence 67999999999999999999988553
No 74
>2pjz_A Hypothetical protein ST1066; ATP binding protein, structural genomics, NPPSFA; 1.90A {Sulfolobus tokodaii}
Probab=98.81 E-value=2.5e-09 Score=70.38 Aligned_cols=25 Identities=20% Similarity=0.343 Sum_probs=24.2
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
|++++|+||||||||||+++|++.+
T Consensus 30 Ge~~~i~G~NGsGKSTLlk~l~Gl~ 54 (263)
T 2pjz_A 30 GEKVIILGPNGSGKTTLLRAISGLL 54 (263)
T ss_dssp SSEEEEECCTTSSHHHHHHHHTTSS
T ss_pred CEEEEEECCCCCCHHHHHHHHhCCC
Confidence 8899999999999999999999988
No 75
>3gd7_A Fusion complex of cystic fibrosis transmembrane conductance regulator, residues 1193-1427...; CFTR, ABC transporter, nucleotide binding domain, NBD; HET: B44; 2.70A {Homo sapiens}
Probab=98.81 E-value=2.8e-09 Score=73.64 Aligned_cols=27 Identities=22% Similarity=0.399 Sum_probs=25.6
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
+|++++|+||||||||||+++|+++++
T Consensus 46 ~Ge~~~llGpsGsGKSTLLr~iaGl~~ 72 (390)
T 3gd7_A 46 PGQRVGLLGRTGSGKSTLLSAFLRLLN 72 (390)
T ss_dssp TTCEEEEEESTTSSHHHHHHHHHTCSE
T ss_pred CCCEEEEECCCCChHHHHHHHHhCCCC
Confidence 699999999999999999999999885
No 76
>3uie_A Adenylyl-sulfate kinase 1, chloroplastic; rossmann fold, transferase-transferase complex; HET: ADX ANP; 1.79A {Arabidopsis thaliana} SCOP: c.37.1.0 PDB: 4fxp_A*
Probab=98.80 E-value=2.6e-09 Score=67.00 Aligned_cols=27 Identities=30% Similarity=0.273 Sum_probs=24.9
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
+|++++|+|||||||||++++|.+.+.
T Consensus 24 ~g~~i~l~G~sGsGKSTl~~~La~~l~ 50 (200)
T 3uie_A 24 KGCVIWVTGLSGSGKSTLACALNQMLY 50 (200)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHH
Confidence 589999999999999999999998773
No 77
>2ehv_A Hypothetical protein PH0186; KAIC, RECA ATPase, unknown function; HET: ADP; 2.07A {Pyrococcus horikoshii} PDB: 2zts_A*
Probab=98.80 E-value=3.6e-09 Score=67.57 Aligned_cols=23 Identities=35% Similarity=0.624 Sum_probs=22.0
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHH
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLI 27 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~ 27 (91)
+|++++|+||||||||||+++|+
T Consensus 29 ~G~~~~l~GpnGsGKSTLl~~i~ 51 (251)
T 2ehv_A 29 EGTTVLLTGGTGTGKTTFAAQFI 51 (251)
T ss_dssp TTCEEEEECCTTSSHHHHHHHHH
T ss_pred CCcEEEEEeCCCCCHHHHHHHHH
Confidence 58999999999999999999998
No 78
>3aez_A Pantothenate kinase; transferase, homodimer, COA biosynthesis, nucleotide binding binding, cytoplasm, nucleotide-binding; HET: GDP PAZ; 2.20A {Mycobacterium tuberculosis} PDB: 2ges_A* 2geu_A* 2gev_A* 2zs7_A* 2zs8_A* 2zs9_A* 2zsa_A* 2zsb_A* 2zsd_A* 2zse_A* 2zsf_A* 2get_A* 3af0_A* 3af1_A* 3af2_A* 3af3_A* 3af4_A* 3avp_A* 3avo_A* 3avq_A*
Probab=98.79 E-value=2.6e-09 Score=71.74 Aligned_cols=28 Identities=21% Similarity=0.133 Sum_probs=25.6
Q ss_pred CCCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 4 LKRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 4 ~~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
.+|++++|+||||||||||+++|.+.++
T Consensus 88 ~~g~ivgI~G~sGsGKSTL~~~L~gll~ 115 (312)
T 3aez_A 88 PVPFIIGVAGSVAVGKSTTARVLQALLA 115 (312)
T ss_dssp CCCEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CCCEEEEEECCCCchHHHHHHHHHhhcc
Confidence 3688999999999999999999999875
No 79
>2v9p_A Replication protein E1; AAA+ molecular motor, DNA replication, DNA translocation, nucleotide-binding, DNA-binding; 3.00A {Bovine papillomavirus type 1} PDB: 2gxa_A*
Probab=98.79 E-value=2.9e-09 Score=71.47 Aligned_cols=26 Identities=27% Similarity=0.422 Sum_probs=24.8
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
+|++++|+||||||||||++.|++.+
T Consensus 125 ~Ge~vaIvGpsGsGKSTLl~lL~gl~ 150 (305)
T 2v9p_A 125 KKNCLAFIGPPNTGKSMLCNSLIHFL 150 (305)
T ss_dssp TCSEEEEECSSSSSHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCcHHHHHHHHhhhc
Confidence 59999999999999999999999987
No 80
>4a74_A DNA repair and recombination protein RADA; hydrolase, recombinase; HET: DNA ANP; 1.48A {Pyrococcus furiosus} PDB: 4a6x_A* 4a6p_A* 4a7o_A*
Probab=98.79 E-value=3.9e-09 Score=66.66 Aligned_cols=26 Identities=19% Similarity=0.227 Sum_probs=24.1
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
+|++++|+||||||||||++.|++..
T Consensus 24 ~G~~~~l~G~nGsGKSTll~~l~g~~ 49 (231)
T 4a74_A 24 TQAITEVFGEFGSGKTQLAHTLAVMV 49 (231)
T ss_dssp SSEEEEEEESTTSSHHHHHHHHHHHT
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHHH
Confidence 58999999999999999999999855
No 81
>2jeo_A Uridine-cytidine kinase 1; UCK, transferase, ATP-binding, nucleoside kinase, nucleotide-binding; 2.50A {Homo sapiens} PDB: 2uvq_A*
Probab=98.79 E-value=3e-09 Score=68.66 Aligned_cols=27 Identities=15% Similarity=0.241 Sum_probs=24.6
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
+|.+++|+||||||||||+++|.+.+.
T Consensus 24 ~g~iigI~G~~GsGKSTl~k~L~~~lG 50 (245)
T 2jeo_A 24 RPFLIGVSGGTASGKSTVCEKIMELLG 50 (245)
T ss_dssp CSEEEEEECSTTSSHHHHHHHHHHHHT
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHhc
Confidence 588999999999999999999998763
No 82
>3j16_B RLI1P; ribosome recycling, translation, eukarya, ribosome; HET: ATP; 7.20A {Saccharomyces cerevisiae}
Probab=98.77 E-value=5.6e-09 Score=75.60 Aligned_cols=28 Identities=25% Similarity=0.428 Sum_probs=26.3
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
+|++++|+||||||||||+++|++.+++
T Consensus 102 ~Gei~~LvGpNGaGKSTLLkiL~Gll~P 129 (608)
T 3j16_B 102 PGQVLGLVGTNGIGKSTALKILAGKQKP 129 (608)
T ss_dssp TTSEEEEECCTTSSHHHHHHHHHTSSCC
T ss_pred CCCEEEEECCCCChHHHHHHHHhcCCCC
Confidence 6999999999999999999999999864
No 83
>1ye8_A Protein THEP1, hypothetical UPF0334 kinase-like protein AQ_1292; mixed alpha-beta protein, rossman fold, signaling protein, transferase; 1.40A {Aquifex aeolicus} SCOP: c.37.1.11
Probab=98.76 E-value=3.8e-09 Score=65.73 Aligned_cols=24 Identities=29% Similarity=0.524 Sum_probs=22.1
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
.++|+||||||||||+++|++.+.
T Consensus 2 ~i~l~G~nGsGKTTLl~~l~g~l~ 25 (178)
T 1ye8_A 2 KIIITGEPGVGKTTLVKKIVERLG 25 (178)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHG
T ss_pred EEEEECCCCCCHHHHHHHHHHHhC
Confidence 589999999999999999999874
No 84
>1yqt_A RNAse L inhibitor; ATP-binding cassette, ribosome biogenesis, hydrolyase/translation complex; HET: ADP; 1.90A {Pyrococcus furiosus}
Probab=98.76 E-value=6.4e-09 Score=74.28 Aligned_cols=28 Identities=21% Similarity=0.275 Sum_probs=26.0
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
+|++++|+||||||||||+++|++.+++
T Consensus 46 ~Ge~~~LvG~NGaGKSTLlk~l~Gl~~p 73 (538)
T 1yqt_A 46 EGMVVGIVGPNGTGKSTAVKILAGQLIP 73 (538)
T ss_dssp TTSEEEEECCTTSSHHHHHHHHHTSSCC
T ss_pred CCCEEEEECCCCCCHHHHHHHHhCCCCC
Confidence 6999999999999999999999998853
No 85
>2eyu_A Twitching motility protein PILT; pilus retraction motor, C-terminal domain PILT, protein transport; 1.87A {Aquifex aeolicus}
Probab=98.76 E-value=4.2e-09 Score=69.14 Aligned_cols=27 Identities=30% Similarity=0.330 Sum_probs=25.1
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
+|++++|+||||||||||++.|++.++
T Consensus 24 ~g~~v~i~Gp~GsGKSTll~~l~g~~~ 50 (261)
T 2eyu_A 24 KMGLILVTGPTGSGKSTTIASMIDYIN 50 (261)
T ss_dssp SSEEEEEECSTTCSHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCccHHHHHHHHHHhCC
Confidence 588999999999999999999999875
No 86
>2i3b_A HCR-ntpase, human cancer-related ntpase; AAA, rossmann, hydrolase; NMR {Homo sapiens} SCOP: c.37.1.11
Probab=98.74 E-value=4.2e-09 Score=66.21 Aligned_cols=26 Identities=27% Similarity=0.368 Sum_probs=23.6
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
|++++|+||||||||||+++|++.++
T Consensus 1 G~~i~i~G~nG~GKTTll~~l~g~~~ 26 (189)
T 2i3b_A 1 ARHVFLTGPPGVGKTTLIHKASEVLK 26 (189)
T ss_dssp CCCEEEESCCSSCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCChHHHHHHHHHhhcc
Confidence 57899999999999999999998763
No 87
>1sq5_A Pantothenate kinase; P-loop, transferase; HET: PAU ADP; 2.20A {Escherichia coli} SCOP: c.37.1.6 PDB: 1esm_A* 1esn_A*
Probab=98.73 E-value=6.1e-09 Score=69.54 Aligned_cols=28 Identities=21% Similarity=0.164 Sum_probs=25.2
Q ss_pred CCCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 4 LKRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 4 ~~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
.+|++++|+||||||||||+++|.+.+.
T Consensus 78 ~~g~iigI~G~~GsGKSTl~~~L~~~l~ 105 (308)
T 1sq5_A 78 RIPYIISIAGSVAVGKSTTARVLQALLS 105 (308)
T ss_dssp CCCEEEEEEECTTSSHHHHHHHHHHHHT
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHh
Confidence 4678999999999999999999999764
No 88
>4e22_A Cytidylate kinase; P-loop, CMP/ATP binding, transferase; 2.32A {Yersinia pseudotuberculosis}
Probab=98.72 E-value=1.1e-08 Score=66.40 Aligned_cols=26 Identities=31% Similarity=0.321 Sum_probs=23.5
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
++.+++|+|||||||||++++|++.+
T Consensus 26 ~g~~I~I~G~~GsGKSTl~k~La~~L 51 (252)
T 4e22_A 26 IAPVITVDGPSGAGKGTLCKALAESL 51 (252)
T ss_dssp TSCEEEEECCTTSSHHHHHHHHHHHT
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHhc
Confidence 57899999999999999999999655
No 89
>2bbw_A Adenylate kinase 4, AK4; nucleotide kinase, nucleotide binding, human, structura genomics, structural genomics consortium, SGC, transferase; HET: GP5; 2.05A {Homo sapiens} PDB: 2ar7_A* 3ndp_A
Probab=98.70 E-value=8.6e-09 Score=66.43 Aligned_cols=26 Identities=23% Similarity=0.339 Sum_probs=22.8
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
++++++|+||||||||||+++|++.+
T Consensus 26 ~~~~i~l~G~~GsGKSTl~k~La~~l 51 (246)
T 2bbw_A 26 KLLRAVILGPPGSGKGTVCQRIAQNF 51 (246)
T ss_dssp CCCEEEEECCTTSSHHHHHHHHHHHH
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHHh
Confidence 46799999999999999999999433
No 90
>3b9q_A Chloroplast SRP receptor homolog, alpha subunit CPFTSY; protein translocation, GTP-binding, nucleotide-binding, protein transport; 1.75A {Arabidopsis thaliana}
Probab=98.70 E-value=8.1e-09 Score=69.08 Aligned_cols=27 Identities=30% Similarity=0.411 Sum_probs=25.3
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
+|++++|+|||||||||+++.|++.+.
T Consensus 99 ~g~vi~lvG~nGsGKTTll~~Lag~l~ 125 (302)
T 3b9q_A 99 KPAVIMIVGVNGGGKTTSLGKLAHRLK 125 (302)
T ss_dssp SCEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CCcEEEEEcCCCCCHHHHHHHHHHHHH
Confidence 688999999999999999999999875
No 91
>3bk7_A ABC transporter ATP-binding protein; ABC ATPase, iron-sulfur cluster, adenosine diphosphate, nucleotide-binding; HET: ADP; 2.80A {Pyrococcus abyssi} PDB: 3j15_B*
Probab=98.69 E-value=1.1e-08 Score=73.96 Aligned_cols=29 Identities=21% Similarity=0.234 Sum_probs=26.4
Q ss_pred CCCcEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 4 LKRKTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 4 ~~g~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
.+|++++|+||||||||||+++|++.+++
T Consensus 115 ~~Ge~~~LiG~NGsGKSTLlkiL~Gll~p 143 (607)
T 3bk7_A 115 KDGMVVGIVGPNGTGKTTAVKILAGQLIP 143 (607)
T ss_dssp CTTSEEEEECCTTSSHHHHHHHHTTSSCC
T ss_pred CCCCEEEEECCCCChHHHHHHHHhCCCCC
Confidence 36999999999999999999999998854
No 92
>1rj9_A FTSY, signal recognition protein; SRP-GTPase domain, heterodimer, nucleotide twinning, protein complex, protein transport; HET: GCP; 1.90A {Thermus aquaticus} SCOP: a.24.13.1 c.37.1.10 PDB: 2q9c_A* 2q9b_A* 2q9a_A* 1okk_D* 2xkv_D 2iyl_D* 2cnw_D* 2j7p_D*
Probab=98.69 E-value=1e-08 Score=68.65 Aligned_cols=28 Identities=32% Similarity=0.475 Sum_probs=25.5
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
+|++++|+|||||||||+++.|++.+..
T Consensus 101 ~g~vi~lvG~nGsGKTTll~~Lagll~~ 128 (304)
T 1rj9_A 101 KGRVVLVVGVNGVGKTTTIAKLGRYYQN 128 (304)
T ss_dssp SSSEEEEECSTTSSHHHHHHHHHHHHHT
T ss_pred CCeEEEEECCCCCcHHHHHHHHHHHHHh
Confidence 5789999999999999999999998753
No 93
>3vaa_A Shikimate kinase, SK; structural genomics, center for structural genomics of infec diseases, csgid, metal binding, transferase; 1.70A {Bacteroides thetaiotaomicron}
Probab=98.69 E-value=1e-08 Score=64.18 Aligned_cols=27 Identities=26% Similarity=0.306 Sum_probs=24.4
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
+++.|+|+||+||||||+++.|++.+.
T Consensus 24 ~~~~i~l~G~~GsGKsTl~~~La~~l~ 50 (199)
T 3vaa_A 24 AMVRIFLTGYMGAGKTTLGKAFARKLN 50 (199)
T ss_dssp CCCEEEEECCTTSCHHHHHHHHHHHHT
T ss_pred CCCEEEEEcCCCCCHHHHHHHHHHHcC
Confidence 478999999999999999999998763
No 94
>3ozx_A RNAse L inhibitor; ATP binding cassette protein, hydrolase, translation; HET: ADP; 2.05A {Sulfolobus solfataricus}
Probab=98.69 E-value=1.2e-08 Score=72.86 Aligned_cols=28 Identities=21% Similarity=0.465 Sum_probs=26.1
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
+|++++|+||||||||||+++|++.+++
T Consensus 293 ~Gei~~i~G~nGsGKSTLl~~l~Gl~~p 320 (538)
T 3ozx_A 293 EGEIIGILGPNGIGKTTFARILVGEITA 320 (538)
T ss_dssp TTCEEEEECCTTSSHHHHHHHHTTSSCC
T ss_pred CCCEEEEECCCCCCHHHHHHHHhCCCCC
Confidence 6899999999999999999999998864
No 95
>1yqt_A RNAse L inhibitor; ATP-binding cassette, ribosome biogenesis, hydrolyase/translation complex; HET: ADP; 1.90A {Pyrococcus furiosus}
Probab=98.68 E-value=1.6e-08 Score=72.24 Aligned_cols=28 Identities=29% Similarity=0.481 Sum_probs=26.1
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
+|++++|+||||||||||+++|++.+++
T Consensus 311 ~Ge~~~i~G~NGsGKSTLlk~l~Gl~~p 338 (538)
T 1yqt_A 311 KGEVIGIVGPNGIGKTTFVKMLAGVEEP 338 (538)
T ss_dssp TTCEEEEECCTTSSHHHHHHHHHTSSCC
T ss_pred CCCEEEEECCCCCCHHHHHHHHhCCCCC
Confidence 5899999999999999999999999864
No 96
>3bk7_A ABC transporter ATP-binding protein; ABC ATPase, iron-sulfur cluster, adenosine diphosphate, nucleotide-binding; HET: ADP; 2.80A {Pyrococcus abyssi} PDB: 3j15_B*
Probab=98.67 E-value=1.6e-08 Score=73.12 Aligned_cols=28 Identities=29% Similarity=0.481 Sum_probs=26.1
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
+|++++|+||||||||||+++|++.+++
T Consensus 381 ~Gei~~i~G~NGsGKSTLlk~l~Gl~~p 408 (607)
T 3bk7_A 381 KGEVIGIVGPNGIGKTTFVKMLAGVEEP 408 (607)
T ss_dssp TTCEEEEECCTTSSHHHHHHHHHTSSCC
T ss_pred CCCEEEEECCCCCCHHHHHHHHhcCCCC
Confidence 5899999999999999999999998864
No 97
>2gza_A Type IV secretion system protein VIRB11; ATPase, hydrolase; 2.60A {Brucella suis}
Probab=98.66 E-value=1.2e-08 Score=69.56 Aligned_cols=28 Identities=29% Similarity=0.450 Sum_probs=26.0
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
+|+.++|+||||||||||+++|++.++.
T Consensus 174 ~G~~i~ivG~sGsGKSTll~~l~~~~~~ 201 (361)
T 2gza_A 174 LERVIVVAGETGSGKTTLMKALMQEIPF 201 (361)
T ss_dssp TTCCEEEEESSSSCHHHHHHHHHTTSCT
T ss_pred cCCEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 5889999999999999999999999874
No 98
>1nn5_A Similar to deoxythymidylate kinase (thymidylate K; P-loop, D4TMP, transferase; HET: 2DT ANP; 1.50A {Homo sapiens} SCOP: c.37.1.1 PDB: 1e2e_A* 1e2d_A* 1e2g_A* 1e2q_A* 1e99_A* 1e9a_A* 1e9b_A* 1nmx_A* 1nmz_A* 1nn0_A* 1nn1_A* 1e2f_A* 1nn3_A* 2xx3_A* 1e9c_A* 1e9d_A* 1e9e_A* 1e98_A* 1nmy_A* 1e9f_A*
Probab=98.66 E-value=1.3e-08 Score=63.69 Aligned_cols=31 Identities=23% Similarity=0.332 Sum_probs=25.3
Q ss_pred CCCCCCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 1 MPPLKRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 1 m~~~~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
||..++.+|+|.|++||||||+++.|.+.+.
T Consensus 4 m~~~~~~~I~l~G~~GsGKsT~~~~L~~~l~ 34 (215)
T 1nn5_A 4 MAARRGALIVLEGVDRAGKSTQSRKLVEALC 34 (215)
T ss_dssp ---CCCCEEEEEESTTSSHHHHHHHHHHHHH
T ss_pred ccccCCcEEEEECCCCCCHHHHHHHHHHHHH
Confidence 6666688999999999999999999998753
No 99
>1rz3_A Hypothetical protein rbstp0775; MCSG, structural genomics, PSI, protein structure initiative; 1.90A {Geobacillus stearothermophilus} SCOP: c.37.1.6
Probab=98.66 E-value=1.6e-08 Score=63.51 Aligned_cols=28 Identities=21% Similarity=0.296 Sum_probs=25.0
Q ss_pred CCCCcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 3 PLKRKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 3 ~~~g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
+.++.+++|+|+|||||||+++.|.+.+
T Consensus 19 ~~~~~~i~i~G~~GsGKstl~~~l~~~~ 46 (201)
T 1rz3_A 19 TAGRLVLGIDGLSRSGKTTLANQLSQTL 46 (201)
T ss_dssp CSSSEEEEEEECTTSSHHHHHHHHHHHH
T ss_pred cCCCeEEEEECCCCCCHHHHHHHHHHHH
Confidence 3468899999999999999999999876
No 100
>2npi_A Protein CLP1; CLP1-PCF11 complex, ATP binding, ternary complex, transcript; HET: ATP; 2.95A {Saccharomyces cerevisiae}
Probab=98.66 E-value=1.2e-08 Score=71.69 Aligned_cols=27 Identities=19% Similarity=0.320 Sum_probs=25.3
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
+|++++|+||||||||||+++|++...
T Consensus 137 ~Ge~v~IvGpnGsGKSTLlr~L~Gl~~ 163 (460)
T 2npi_A 137 EGPRVVIVGGSQTGKTSLSRTLCSYAL 163 (460)
T ss_dssp SCCCEEEEESTTSSHHHHHHHHHHTTH
T ss_pred CCCEEEEECCCCCCHHHHHHHHhCccc
Confidence 689999999999999999999999874
No 101
>2rcn_A Probable GTPase ENGC; YJEQ, circularly permuted, GTP-binding, hydrolase, nucleotide-binding; HET: GDP; 2.25A {Salmonella typhimurium} PDB: 2ykr_W 4a2i_V
Probab=98.66 E-value=3.4e-08 Score=67.62 Aligned_cols=27 Identities=22% Similarity=0.391 Sum_probs=25.0
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
+|++++|+||||||||||+++|.+...
T Consensus 214 ~G~~~~lvG~sG~GKSTLln~L~g~~~ 240 (358)
T 2rcn_A 214 TGRISIFAGQSGVGKSSLLNALLGLQN 240 (358)
T ss_dssp TTSEEEEECCTTSSHHHHHHHHHCCSS
T ss_pred CCCEEEEECCCCccHHHHHHHHhcccc
Confidence 578999999999999999999998875
No 102
>2vp4_A Deoxynucleoside kinase; ATP-binding, DNA synthesis, phosphoprotein, feedback inhibition, deoxyribonucleoside kinase, salvage pathway; HET: DCP; 2.20A {Drosophila melanogaster} SCOP: c.37.1.1 PDB: 1j90_A* 2jj8_A* 2vp2_A* 1oe0_A* 2vp5_A* 2vp6_A* 2vp9_A* 2vpp_A* 2vqs_A* 2vp0_A* 1ot3_A* 2jcs_A* 1zm7_A* 1zmx_A*
Probab=98.65 E-value=1.3e-08 Score=65.14 Aligned_cols=26 Identities=19% Similarity=0.230 Sum_probs=24.0
Q ss_pred CCCcEEEEEcCCCCCHHHHHHHHHhh
Q psy4405 4 LKRKTIALVGCQGVGRRTLKARLINS 29 (91)
Q Consensus 4 ~~g~~i~l~GpsGaGKsTl~~~L~~~ 29 (91)
.+|++++|.|++||||||++++|.+.
T Consensus 18 ~~g~~i~i~G~~GsGKSTl~~~L~~~ 43 (230)
T 2vp4_A 18 TQPFTVLIEGNIGSGKTTYLNHFEKY 43 (230)
T ss_dssp CCCEEEEEECSTTSCHHHHHHTTGGG
T ss_pred CCceEEEEECCCCCCHHHHHHHHHhc
Confidence 46899999999999999999999886
No 103
>3e70_C DPA, signal recognition particle receptor; FTSY, SRP-GTPase, protein-targeting, transport protein; HET: GDP; 1.97A {Pyrococcus furiosus} PDB: 3dmd_B 3dm9_B*
Probab=98.65 E-value=1.5e-08 Score=68.53 Aligned_cols=28 Identities=36% Similarity=0.377 Sum_probs=25.6
Q ss_pred CCCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 4 LKRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 4 ~~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
.+|++++|+|||||||||+++.|++.+.
T Consensus 127 ~~g~vi~lvG~nGaGKTTll~~Lag~l~ 154 (328)
T 3e70_C 127 EKPYVIMFVGFNGSGKTTTIAKLANWLK 154 (328)
T ss_dssp CSSEEEEEECCTTSSHHHHHHHHHHHHH
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHHH
Confidence 3689999999999999999999999875
No 104
>1y63_A LMAJ004144AAA protein; structural genomics, protein structure initiative, PSI, SGPP structural genomics of pathogenic protozoa consortium; HET: ADP; 1.70A {Leishmania major} SCOP: c.37.1.1
Probab=98.65 E-value=2.6e-08 Score=61.70 Aligned_cols=29 Identities=21% Similarity=0.383 Sum_probs=25.6
Q ss_pred CCCCCCcEEEEEcCCCCCHHHHHHHHHhh
Q psy4405 1 MPPLKRKTIALVGCQGVGRRTLKARLINS 29 (91)
Q Consensus 1 m~~~~g~~i~l~GpsGaGKsTl~~~L~~~ 29 (91)
|++.++..|+|+|++||||||+++.|...
T Consensus 5 ~~~~~~~~I~l~G~~GsGKSTv~~~La~~ 33 (184)
T 1y63_A 5 MEQPKGINILITGTPGTGKTSMAEMIAAE 33 (184)
T ss_dssp -CCCSSCEEEEECSTTSSHHHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCCCCHHHHHHHHHHh
Confidence 45567889999999999999999999988
No 105
>1cke_A CK, MSSA, protein (cytidine monophosphate kinase); nucleotide monophosphate kinase,, transferase; 1.75A {Escherichia coli} SCOP: c.37.1.1 PDB: 1kdo_A* 1kdp_A* 1kdr_A* 1kdt_A* 2cmk_A* 2fem_A 2feo_A*
Probab=98.64 E-value=1.8e-08 Score=63.73 Aligned_cols=25 Identities=24% Similarity=0.344 Sum_probs=22.9
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
+.+++|+||+||||||+++.|.+.+
T Consensus 5 ~~~i~i~G~~GsGKSTl~~~L~~~~ 29 (227)
T 1cke_A 5 APVITIDGPSGAGKGTLCKAMAEAL 29 (227)
T ss_dssp SCEEEEECCTTSSHHHHHHHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHh
Confidence 5689999999999999999999865
No 106
>3b60_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; HET: ANP; 3.70A {Salmonella typhimurium} SCOP: c.37.1.12 f.37.1.1 PDB: 3b5y_A* 3b5z_A* 3b5w_A
Probab=98.64 E-value=1.8e-08 Score=72.30 Aligned_cols=28 Identities=32% Similarity=0.420 Sum_probs=26.2
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
+|+.++|+||||||||||++.|.+.+++
T Consensus 368 ~G~~~~ivG~sGsGKSTLl~~l~g~~~p 395 (582)
T 3b60_A 368 AGKTVALVGRSGSGKSTIASLITRFYDI 395 (582)
T ss_dssp TTCEEEEEECTTSSHHHHHHHHTTTTCC
T ss_pred CCCEEEEECCCCCCHHHHHHHHhhccCC
Confidence 5999999999999999999999999864
No 107
>2yv5_A YJEQ protein; hydrolase, GTPase, permutation, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: GDP; 1.90A {Aquifex aeolicus}
Probab=98.64 E-value=4.3e-08 Score=65.38 Aligned_cols=26 Identities=27% Similarity=0.431 Sum_probs=23.9
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
.|++++|+||||||||||+++|. ...
T Consensus 164 ~G~i~~l~G~sG~GKSTLln~l~-~~~ 189 (302)
T 2yv5_A 164 EGFICILAGPSGVGKSSILSRLT-GEE 189 (302)
T ss_dssp TTCEEEEECSTTSSHHHHHHHHH-SCC
T ss_pred cCcEEEEECCCCCCHHHHHHHHH-Hhh
Confidence 57899999999999999999999 765
No 108
>3b5x_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; 5.50A {Vibrio cholerae}
Probab=98.64 E-value=2e-08 Score=72.12 Aligned_cols=28 Identities=32% Similarity=0.426 Sum_probs=26.2
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
+|+.++|+||||||||||++.|.+.+++
T Consensus 368 ~G~~~~ivG~sGsGKSTll~~l~g~~~p 395 (582)
T 3b5x_A 368 QGKTVALVGRSGSGKSTIANLFTRFYDV 395 (582)
T ss_pred CCCEEEEECCCCCCHHHHHHHHhcCCCC
Confidence 5999999999999999999999999864
No 109
>3j16_B RLI1P; ribosome recycling, translation, eukarya, ribosome; HET: ATP; 7.20A {Saccharomyces cerevisiae}
Probab=98.64 E-value=2.1e-08 Score=72.60 Aligned_cols=28 Identities=21% Similarity=0.366 Sum_probs=25.7
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
+|++++|+||||||||||+++|++.+++
T Consensus 377 ~GEiv~iiG~NGsGKSTLlk~l~Gl~~p 404 (608)
T 3j16_B 377 DSEILVMMGENGTGKTTLIKLLAGALKP 404 (608)
T ss_dssp TTCEEEEESCTTSSHHHHHHHHHTSSCC
T ss_pred cceEEEEECCCCCcHHHHHHHHhcCCCC
Confidence 4689999999999999999999999864
No 110
>1lw7_A Transcriptional regulator NADR; NMN, NMN adenylyl transferase, ribosylnicotinamide KINA transferase; HET: NAD; 2.90A {Haemophilus influenzae} SCOP: c.26.1.3 c.37.1.1
Probab=98.62 E-value=1.9e-08 Score=68.34 Aligned_cols=27 Identities=26% Similarity=0.403 Sum_probs=25.2
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
++.++|+||||||||||+++|++.+.+
T Consensus 170 g~k~~IvG~nGsGKSTLlk~L~gl~~~ 196 (365)
T 1lw7_A 170 AKTVAILGGESSGKSVLVNKLAAVFNT 196 (365)
T ss_dssp CEEEEEECCTTSHHHHHHHHHHHHTTC
T ss_pred hCeEEEECCCCCCHHHHHHHHHHHhCC
Confidence 789999999999999999999999864
No 111
>2og2_A Putative signal recognition particle receptor; nucleotide-binding, protein transport; 2.00A {Arabidopsis thaliana}
Probab=98.62 E-value=1.8e-08 Score=68.99 Aligned_cols=27 Identities=30% Similarity=0.411 Sum_probs=25.3
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
+|++++|+|||||||||+++.|++.+.
T Consensus 156 ~g~vi~lvG~nGsGKTTll~~Lag~l~ 182 (359)
T 2og2_A 156 KPAVIMIVGVNGGGKTTSLGKLAHRLK 182 (359)
T ss_dssp SSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CCeEEEEEcCCCChHHHHHHHHHhhcc
Confidence 689999999999999999999999875
No 112
>3sop_A Neuronal-specific septin-3; hydrolase; HET: GDP; 2.88A {Homo sapiens}
Probab=98.61 E-value=2.2e-08 Score=65.99 Aligned_cols=24 Identities=38% Similarity=0.585 Sum_probs=22.1
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
.++|+||||||||||+++|++...
T Consensus 4 ~v~lvG~nGaGKSTLln~L~g~~~ 27 (270)
T 3sop_A 4 NIMVVGQSGLGKSTLVNTLFKSQV 27 (270)
T ss_dssp EEEEEESSSSSHHHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHhCCCC
Confidence 478999999999999999999875
No 113
>2yl4_A ATP-binding cassette SUB-family B member 10, mitochondrial; membrane protein, mitochondrial transport; HET: ACP LMT CDL 14Y; 2.85A {Homo sapiens} PDB: 4aa3_A*
Probab=98.61 E-value=1.7e-08 Score=72.60 Aligned_cols=28 Identities=29% Similarity=0.362 Sum_probs=26.2
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
+|+.++|+||||||||||++.|.+.+++
T Consensus 369 ~G~~~~ivG~sGsGKSTLl~~l~g~~~p 396 (595)
T 2yl4_A 369 SGSVTALVGPSGSGKSTVLSLLLRLYDP 396 (595)
T ss_dssp TTCEEEEECCTTSSSTHHHHHHTTSSCC
T ss_pred CCCEEEEECCCCCCHHHHHHHHhcCcCC
Confidence 5999999999999999999999999864
No 114
>2pt7_A CAG-ALFA; ATPase, protein-protein complex, type IV secretion, hydrolas binding complex; 2.40A {Helicobacter pylori} SCOP: c.37.1.11 PDB: 1nly_A* 1nlz_A 1opx_A* 1g6o_A
Probab=98.60 E-value=2e-08 Score=67.88 Aligned_cols=28 Identities=21% Similarity=0.396 Sum_probs=25.7
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
+|+.++|+||||||||||++.|++.+++
T Consensus 170 ~g~~v~i~G~~GsGKTTll~~l~g~~~~ 197 (330)
T 2pt7_A 170 IGKNVIVCGGTGSGKTTYIKSIMEFIPK 197 (330)
T ss_dssp HTCCEEEEESTTSCHHHHHHHGGGGSCT
T ss_pred CCCEEEEECCCCCCHHHHHHHHhCCCcC
Confidence 4789999999999999999999999874
No 115
>2obl_A ESCN; ATPase, hydrolase; 1.80A {Escherichia coli O127} PDB: 2obm_A*
Probab=98.59 E-value=3.4e-08 Score=67.22 Aligned_cols=29 Identities=24% Similarity=0.326 Sum_probs=26.6
Q ss_pred CCCcEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 4 LKRKTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 4 ~~g~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
.+|.+++|+||||||||||+++|++....
T Consensus 69 ~~Gq~~gIiG~nGaGKTTLl~~I~g~~~~ 97 (347)
T 2obl_A 69 GIGQRIGIFAGSGVGKSTLLGMICNGASA 97 (347)
T ss_dssp ETTCEEEEEECTTSSHHHHHHHHHHHSCC
T ss_pred cCCCEEEEECCCCCCHHHHHHHHhcCCCC
Confidence 47999999999999999999999999864
No 116
>3t61_A Gluconokinase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium, nysgrc; 2.20A {Sinorhizobium meliloti}
Probab=98.59 E-value=2.6e-08 Score=62.22 Aligned_cols=26 Identities=15% Similarity=0.395 Sum_probs=23.3
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
.++++|+|++||||||+++.|.+.+.
T Consensus 18 ~~~I~l~G~~GsGKSTla~~L~~~lg 43 (202)
T 3t61_A 18 PGSIVVMGVSGSGKSSVGEAIAEACG 43 (202)
T ss_dssp SSCEEEECSTTSCHHHHHHHHHHHHT
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHhC
Confidence 46899999999999999999988763
No 117
>4a82_A Cystic fibrosis transmembrane conductance regulat; CFTR, ION channel, transport protein, casse protein; 2.00A {Homo sapiens} PDB: 2onj_A* 2hyd_A
Probab=98.59 E-value=1.6e-08 Score=72.54 Aligned_cols=28 Identities=32% Similarity=0.367 Sum_probs=26.2
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
+|+.++|+||||||||||++.|.+.+++
T Consensus 366 ~G~~~~ivG~sGsGKSTll~~l~g~~~p 393 (578)
T 4a82_A 366 KGETVAFVGMSGGGKSTLINLIPRFYDV 393 (578)
T ss_dssp TTCEEEEECSTTSSHHHHHTTTTTSSCC
T ss_pred CCCEEEEECCCCChHHHHHHHHhcCCCC
Confidence 6999999999999999999999999874
No 118
>3qf4_B Uncharacterized ABC transporter ATP-binding prote TM_0288; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=98.58 E-value=2.4e-08 Score=71.98 Aligned_cols=28 Identities=29% Similarity=0.385 Sum_probs=26.2
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
+|+.++|+||||||||||++.|.+.+++
T Consensus 380 ~G~~~~ivG~sGsGKSTll~~l~g~~~p 407 (598)
T 3qf4_B 380 PGQKVALVGPTGSGKTTIVNLLMRFYDV 407 (598)
T ss_dssp TTCEEEEECCTTSSTTHHHHHHTTSSCC
T ss_pred CCCEEEEECCCCCcHHHHHHHHhcCcCC
Confidence 5999999999999999999999999864
No 119
>2qt1_A Nicotinamide riboside kinase 1; non-protein kinase, NAD+, NRK1, nicotinic acid riboside kinase activity, NAD biosynthesis; HET: NNR; 1.32A {Homo sapiens} PDB: 2qsy_A* 2qsz_A* 2qt0_A* 2p0e_A* 2qg6_A* 2ql6_A*
Probab=98.58 E-value=3.8e-08 Score=61.71 Aligned_cols=27 Identities=30% Similarity=0.418 Sum_probs=24.4
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
++.+++|+|++||||||+++.|.+.++
T Consensus 20 ~~~~i~i~G~~GsGKSTl~~~L~~~~~ 46 (207)
T 2qt1_A 20 KTFIIGISGVTNSGKTTLAKNLQKHLP 46 (207)
T ss_dssp CCEEEEEEESTTSSHHHHHHHHHTTST
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHhcC
Confidence 578999999999999999999998763
No 120
>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*
Probab=98.58 E-value=1.4e-07 Score=65.35 Aligned_cols=26 Identities=23% Similarity=0.400 Sum_probs=23.2
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
++++++|+|++||||||+++.|...+
T Consensus 257 ~~~lIil~G~pGSGKSTla~~L~~~~ 282 (416)
T 3zvl_A 257 NPEVVVAVGFPGAGKSTFIQEHLVSA 282 (416)
T ss_dssp SCCEEEEESCTTSSHHHHHHHHTGGG
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHhc
Confidence 46799999999999999999998765
No 121
>2yhs_A FTSY, cell division protein FTSY; cell cycle, protein targeting, simibi class GTPase, GTP-BIND membrane, nucleotide-binding; 1.60A {Escherichia coli} PDB: 2qy9_A 2xxa_B* 1fts_A
Probab=98.57 E-value=2.8e-08 Score=70.57 Aligned_cols=27 Identities=30% Similarity=0.411 Sum_probs=25.2
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
+|++++|+||||||||||+++|++.+.
T Consensus 292 ~GeVI~LVGpNGSGKTTLl~~LAgll~ 318 (503)
T 2yhs_A 292 APFVILMVGVNGVGKTTTIGKLARQFE 318 (503)
T ss_dssp TTEEEEEECCTTSSHHHHHHHHHHHHH
T ss_pred CCeEEEEECCCcccHHHHHHHHHHHhh
Confidence 688999999999999999999999874
No 122
>3qf4_A ABC transporter, ATP-binding protein; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=98.57 E-value=3e-08 Score=71.35 Aligned_cols=28 Identities=21% Similarity=0.259 Sum_probs=26.2
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
+|+.++|+||||||||||++.|.+.+++
T Consensus 368 ~Ge~~~ivG~sGsGKSTll~~l~g~~~~ 395 (587)
T 3qf4_A 368 PGSLVAVLGETGSGKSTLMNLIPRLIDP 395 (587)
T ss_dssp TTCEEEEECSSSSSHHHHHHTTTTSSCC
T ss_pred CCCEEEEECCCCCCHHHHHHHHhCCccC
Confidence 5999999999999999999999999874
No 123
>1u0l_A Probable GTPase ENGC; permutation, OB-fold, zinc-finger, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; HET: GDP; 2.80A {Thermotoga maritima} SCOP: b.40.4.5 c.37.1.8
Probab=98.56 E-value=4e-08 Score=65.43 Aligned_cols=28 Identities=25% Similarity=0.317 Sum_probs=25.4
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
.+++++|+||||||||||+++|.+....
T Consensus 168 ~geiv~l~G~sG~GKSTll~~l~g~~~~ 195 (301)
T 1u0l_A 168 KGKISTMAGLSGVGKSSLLNAINPGLKL 195 (301)
T ss_dssp SSSEEEEECSTTSSHHHHHHHHSTTCCC
T ss_pred cCCeEEEECCCCCcHHHHHHHhcccccc
Confidence 5789999999999999999999998853
No 124
>3ec2_A DNA replication protein DNAC; helicase loader, replication initiation factor, ATP-binding, nucleotide-binding; HET: DNA ADP; 2.70A {Aquifex aeolicus} PDB: 3ecc_A*
Probab=98.56 E-value=3.3e-08 Score=60.73 Aligned_cols=26 Identities=27% Similarity=0.515 Sum_probs=23.9
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
+|+.++|+||+|+|||||+++|++.+
T Consensus 37 ~g~~~~l~G~~G~GKTtL~~~i~~~~ 62 (180)
T 3ec2_A 37 EGKGLTFVGSPGVGKTHLAVATLKAI 62 (180)
T ss_dssp GCCEEEECCSSSSSHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHH
Confidence 47899999999999999999998876
No 125
>2rhm_A Putative kinase; P-loop containing nucleoside triphosphate hydrolases fold, S genomics, joint center for structural genomics, JCSG; HET: MSE; 1.70A {Chloroflexus aurantiacus}
Probab=98.56 E-value=4.2e-08 Score=60.47 Aligned_cols=27 Identities=22% Similarity=0.288 Sum_probs=24.0
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
++.+|+|+|++||||||+++.|...+.
T Consensus 4 ~~~~I~l~G~~GsGKST~~~~L~~~l~ 30 (193)
T 2rhm_A 4 TPALIIVTGHPATGKTTLSQALATGLR 30 (193)
T ss_dssp CCEEEEEEESTTSSHHHHHHHHHHHHT
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHcC
Confidence 378999999999999999999988653
No 126
>3kb2_A SPBC2 prophage-derived uncharacterized protein YORR; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: G3D; 2.20A {Bacillus subtilis} SCOP: c.37.1.1 PDB: 2axp_A*
Probab=98.55 E-value=3.9e-08 Score=59.45 Aligned_cols=25 Identities=24% Similarity=0.167 Sum_probs=22.3
Q ss_pred cEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 7 KTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 7 ~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
++|+|+||+||||||+++.|.+.+.
T Consensus 2 ~~i~l~G~~GsGKsT~~~~L~~~l~ 26 (173)
T 3kb2_A 2 TLIILEGPDCCFKSTVAAKLSKELK 26 (173)
T ss_dssp CEEEEECSSSSSHHHHHHHHHHHHC
T ss_pred eEEEEECCCCCCHHHHHHHHHHHhC
Confidence 3789999999999999999998753
No 127
>2dpy_A FLII, flagellum-specific ATP synthase; beta barrel, alpha-beta structure, hydrolase; HET: ADP; 2.40A {Salmonella typhimurium}
Probab=98.55 E-value=5.7e-08 Score=67.96 Aligned_cols=30 Identities=17% Similarity=0.251 Sum_probs=27.1
Q ss_pred CCCCcEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 3 PLKRKTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 3 ~~~g~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
-.+|+.++|+||||||||||+++|+++...
T Consensus 154 i~~Gq~~~IvG~sGsGKSTLl~~Iag~~~~ 183 (438)
T 2dpy_A 154 VGRGQRMGLFAGSGVGKSVLLGMMARYTRA 183 (438)
T ss_dssp CBTTCEEEEEECTTSSHHHHHHHHHHHSCC
T ss_pred ecCCCEEEEECCCCCCHHHHHHHHhcccCC
Confidence 347999999999999999999999999864
No 128
>1qf9_A UMP/CMP kinase, protein (uridylmonophosphate/cytidylmonophosphate kinase); nucleoside monophosphate kinase, NMP kinase; HET: ADP C5P; 1.70A {Dictyostelium discoideum} SCOP: c.37.1.1 PDB: 1uke_A* 2ukd_A* 3ukd_A* 4ukd_A* 5ukd_A*
Probab=98.55 E-value=5.7e-08 Score=59.63 Aligned_cols=31 Identities=23% Similarity=0.321 Sum_probs=26.8
Q ss_pred CCCCCCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 1 MPPLKRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 1 m~~~~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
|...++.+|+|.|++||||||+++.|...+.
T Consensus 1 m~~~~~~~I~l~G~~GsGKsT~~~~L~~~l~ 31 (194)
T 1qf9_A 1 MEKSKPNVVFVLGGPGSGKGTQCANIVRDFG 31 (194)
T ss_dssp CCCCCCEEEEEEESTTSSHHHHHHHHHHHHC
T ss_pred CCCCcCcEEEEECCCCCCHHHHHHHHHHHhC
Confidence 5666677999999999999999999988653
No 129
>3trf_A Shikimate kinase, SK; amino acid biosynthesis, transferase; 2.60A {Coxiella burnetii}
Probab=98.54 E-value=4.6e-08 Score=60.13 Aligned_cols=27 Identities=22% Similarity=0.428 Sum_probs=23.4
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
.++.|+|+||+||||||+++.|++.+.
T Consensus 4 ~~~~i~l~G~~GsGKst~a~~La~~l~ 30 (185)
T 3trf_A 4 NLTNIYLIGLMGAGKTSVGSQLAKLTK 30 (185)
T ss_dssp -CCEEEEECSTTSSHHHHHHHHHHHHC
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHhC
Confidence 356899999999999999999998763
No 130
>2w0m_A SSO2452; RECA, SSPF, unknown FUN; 2.0A {Sulfolobus solfataricus P2}
Probab=98.53 E-value=6.5e-08 Score=60.84 Aligned_cols=26 Identities=27% Similarity=0.406 Sum_probs=23.6
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
+|++++|+||||||||||++.|+...
T Consensus 22 ~G~~~~i~G~~GsGKTtl~~~l~~~~ 47 (235)
T 2w0m_A 22 QGFFIALTGEPGTGKTIFSLHFIAKG 47 (235)
T ss_dssp TTCEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCHHHHHHHHHHHH
Confidence 58999999999999999999998654
No 131
>3cm0_A Adenylate kinase; ATP-binding, cytoplasm, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics; 1.80A {Thermus thermophilus}
Probab=98.53 E-value=4.3e-08 Score=60.23 Aligned_cols=26 Identities=23% Similarity=0.401 Sum_probs=23.5
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
+|.+|+|+|++||||||+++.|.+.+
T Consensus 3 ~g~~I~l~G~~GsGKST~~~~La~~l 28 (186)
T 3cm0_A 3 VGQAVIFLGPPGAGKGTQASRLAQEL 28 (186)
T ss_dssp CEEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHh
Confidence 47899999999999999999998765
No 132
>2qag_B Septin-6, protein NEDD5; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens}
Probab=98.53 E-value=4.3e-08 Score=68.50 Aligned_cols=26 Identities=35% Similarity=0.491 Sum_probs=23.5
Q ss_pred CCcE--EEEEcCCCCCHHHHHHHHHhhC
Q psy4405 5 KRKT--IALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 5 ~g~~--i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
+|.+ ++|+||||||||||++.|++..
T Consensus 39 ~Gei~~vaLvG~nGaGKSTLln~L~G~~ 66 (427)
T 2qag_B 39 QGFCFNILCVGETGLGKSTLMDTLFNTK 66 (427)
T ss_dssp -CCEEEEEEECSTTSSSHHHHHHHHTSC
T ss_pred CCCeeEEEEECCCCCCHHHHHHHHhCcc
Confidence 5888 9999999999999999999875
No 133
>2ewv_A Twitching motility protein PILT; pilus retraction motor, ATPase, hexameric PILT, protein TRAN; HET: ADP; 2.80A {Aquifex aeolicus} PDB: 2eww_A* 2gsz_A*
Probab=98.53 E-value=4.4e-08 Score=67.13 Aligned_cols=27 Identities=30% Similarity=0.330 Sum_probs=25.0
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
+|.+++|+||||||||||++.|++.++
T Consensus 135 ~g~~i~ivG~~GsGKTTll~~l~~~~~ 161 (372)
T 2ewv_A 135 KMGLILVTGPTGSGKSTTIASMIDYIN 161 (372)
T ss_dssp SSEEEEEECSSSSSHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHHhhcC
Confidence 588999999999999999999999875
No 134
>1t9h_A YLOQ, probable GTPase ENGC; N-terminal beta-barrel domain with oligonucleotide binding fold, central GTP binding domain; 1.60A {Bacillus subtilis} SCOP: b.40.4.5 c.37.1.8
Probab=98.53 E-value=1.3e-08 Score=68.36 Aligned_cols=27 Identities=26% Similarity=0.374 Sum_probs=23.0
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
+|++++|+||||||||||++.|.+...
T Consensus 172 ~G~~~~lvG~sG~GKSTLln~L~g~~~ 198 (307)
T 1t9h_A 172 QDKTTVFAGQSGVGKSSLLNAISPELG 198 (307)
T ss_dssp TTSEEEEEESHHHHHHHHHHHHCC---
T ss_pred CCCEEEEECCCCCCHHHHHHHhccccc
Confidence 589999999999999999999998775
No 135
>1tq4_A IIGP1, interferon-inducible GTPase; interferon gamma, dimer, immunology, signaling protein; HET: GDP; 1.95A {Mus musculus} SCOP: c.37.1.8 PDB: 1tqd_A* 1tq6_A* 1tpz_A* 1tq2_A*
Probab=98.52 E-value=6.4e-08 Score=67.32 Aligned_cols=24 Identities=21% Similarity=0.372 Sum_probs=22.8
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
+++|+||||||||||+++|.+..+
T Consensus 71 ~valvG~nGaGKSTLln~L~Gl~~ 94 (413)
T 1tq4_A 71 NVAVTGETGSGKSSFINTLRGIGN 94 (413)
T ss_dssp EEEEEECTTSSHHHHHHHHHTCCT
T ss_pred EEEEECCCCCcHHHHHHHHhCCCC
Confidence 899999999999999999999875
No 136
>2pez_A Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthetase 1 (PAPS synthetase...; NMP-kinase fold, protein in complex with nucleic acid; HET: GGZ DAT; 1.40A {Homo sapiens} PDB: 2pey_A* 2ax4_A*
Probab=98.51 E-value=6.2e-08 Score=59.48 Aligned_cols=26 Identities=27% Similarity=0.340 Sum_probs=24.1
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
+|.+++|+|++||||||+++.|.+.+
T Consensus 4 ~g~~i~l~G~~GsGKST~~~~L~~~l 29 (179)
T 2pez_A 4 RGCTVWLTGLSGAGKTTVSMALEEYL 29 (179)
T ss_dssp CCEEEEEECCTTSSHHHHHHHHHHHH
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHHH
Confidence 68899999999999999999999865
No 137
>3jvv_A Twitching mobility protein; hexameric P-loop ATPase, secretion ATPase, ATP-binding, FIMB nucleotide-binding, transport; HET: ACP CIT; 2.60A {Pseudomonas aeruginosa} PDB: 3jvu_A*
Probab=98.51 E-value=6.7e-08 Score=66.00 Aligned_cols=27 Identities=22% Similarity=0.329 Sum_probs=24.3
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
++.+++|+||||||||||++.|++.++
T Consensus 122 ~~g~i~I~GptGSGKTTlL~~l~g~~~ 148 (356)
T 3jvv_A 122 PRGLVLVTGPTGSGKSTTLAAMLDYLN 148 (356)
T ss_dssp SSEEEEEECSTTSCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHHhccc
Confidence 456999999999999999999998875
No 138
>1ly1_A Polynucleotide kinase; PNK, phosphatase, transferase; 2.00A {Enterobacteria phage T4} SCOP: c.37.1.1
Probab=98.51 E-value=6.9e-08 Score=58.75 Aligned_cols=22 Identities=36% Similarity=0.708 Sum_probs=20.8
Q ss_pred cEEEEEcCCCCCHHHHHHHHHh
Q psy4405 7 KTIALVGCQGVGRRTLKARLIN 28 (91)
Q Consensus 7 ~~i~l~GpsGaGKsTl~~~L~~ 28 (91)
.+|+|.|++||||||+++.|..
T Consensus 3 ~~I~i~G~~GsGKST~a~~L~~ 24 (181)
T 1ly1_A 3 KIILTIGCPGSGKSTWAREFIA 24 (181)
T ss_dssp EEEEEECCTTSSHHHHHHHHHH
T ss_pred eEEEEecCCCCCHHHHHHHHHh
Confidence 5899999999999999999998
No 139
>2kjq_A DNAA-related protein; solution structure, NESG, structural genomics, PSI-2, protei structure initiative; NMR {Neisseria meningitidis serogroup B}
Probab=98.51 E-value=4.7e-08 Score=59.12 Aligned_cols=27 Identities=19% Similarity=0.267 Sum_probs=24.4
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
+|+.++|+||+|+|||||+++|.+...
T Consensus 35 ~g~~~~l~G~~G~GKTtL~~~i~~~~~ 61 (149)
T 2kjq_A 35 HGQFIYVWGEEGAGKSHLLQAWVAQAL 61 (149)
T ss_dssp CCSEEEEESSSTTTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 578999999999999999999998763
No 140
>1kht_A Adenylate kinase; phosphotransferase, signaling protein, transferase; HET: AMP; 2.50A {Methanococcus voltae} SCOP: c.37.1.1 PDB: 3h86_B* 1ki9_A
Probab=98.51 E-value=6.1e-08 Score=59.50 Aligned_cols=26 Identities=23% Similarity=0.382 Sum_probs=23.3
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
+.+|+|.|++||||||+++.|...+.
T Consensus 3 ~~~I~i~G~~GsGKsT~~~~L~~~l~ 28 (192)
T 1kht_A 3 NKVVVVTGVPGVGSTTSSQLAMDNLR 28 (192)
T ss_dssp CCEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHH
Confidence 57899999999999999999988653
No 141
>1p9r_A General secretion pathway protein E; bacterial type II secretion system cytoplasmic protein - GSPE, putative ATPase/ ATP binding protein; 2.50A {Vibrio cholerae} SCOP: c.37.1.11 PDB: 1p9w_A*
Probab=98.50 E-value=6e-08 Score=67.50 Aligned_cols=28 Identities=18% Similarity=0.157 Sum_probs=25.2
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
++.+++|+||||||||||++.|++.++.
T Consensus 166 ~ggii~I~GpnGSGKTTlL~allg~l~~ 193 (418)
T 1p9r_A 166 PHGIILVTGPTGSGKSTTLYAGLQELNS 193 (418)
T ss_dssp SSEEEEEECSTTSCHHHHHHHHHHHHCC
T ss_pred cCCeEEEECCCCCCHHHHHHHHHhhcCC
Confidence 5779999999999999999999998753
No 142
>3tqc_A Pantothenate kinase; biosynthesis of cofactors, prosthetic groups, carriers, TRAN; HET: ADP; 2.30A {Coxiella burnetii}
Probab=98.50 E-value=7.9e-08 Score=64.93 Aligned_cols=26 Identities=23% Similarity=0.227 Sum_probs=23.1
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
..+++|+||||||||||+++|.+.+.
T Consensus 92 p~iigI~GpsGSGKSTl~~~L~~ll~ 117 (321)
T 3tqc_A 92 PYIIGIAGSVAVGKSTTSRVLKALLS 117 (321)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHHHT
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHhc
Confidence 34899999999999999999988764
No 143
>2oap_1 GSPE-2, type II secretion system protein; hexameric ATPase, hydrolase; HET: ANP; 2.95A {Archaeoglobus fulgidus} PDB: 2oaq_1
Probab=98.50 E-value=6.5e-08 Score=68.81 Aligned_cols=28 Identities=18% Similarity=0.241 Sum_probs=25.6
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
.|..++|+||||||||||+++|++.+++
T Consensus 259 ~g~~i~I~GptGSGKTTlL~aL~~~i~~ 286 (511)
T 2oap_1 259 HKFSAIVVGETASGKTTTLNAIMMFIPP 286 (511)
T ss_dssp TTCCEEEEESTTSSHHHHHHHHGGGSCT
T ss_pred CCCEEEEECCCCCCHHHHHHHHHhhCCC
Confidence 4778999999999999999999999864
No 144
>3euj_A Chromosome partition protein MUKB, linker; MUKB, MUKE, chromosome condensation, condensin, SMC, N subunit, ABC-type ATPase, WHD, ATP-binding; HET: AGS; 3.10A {Haemophilus ducreyi} PDB: 3euk_A*
Probab=98.50 E-value=6.2e-08 Score=68.59 Aligned_cols=26 Identities=23% Similarity=0.307 Sum_probs=24.1
Q ss_pred cEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 7 KTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 7 ~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
++++|+||||||||||+++|++.+++
T Consensus 30 e~~~liG~nGsGKSTLl~~l~Gl~~p 55 (483)
T 3euj_A 30 LVTTLSGGNGAGKSTTMAGFVTALIP 55 (483)
T ss_dssp SEEEEECCTTSSHHHHHHHHHHHHCC
T ss_pred ceEEEECCCCCcHHHHHHHHhcCCCC
Confidence 79999999999999999999998753
No 145
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=98.50 E-value=8.1e-08 Score=74.43 Aligned_cols=28 Identities=36% Similarity=0.404 Sum_probs=26.0
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
+|+.++|+||||||||||++.|.+.+.+
T Consensus 1104 ~Ge~vaIVG~SGsGKSTL~~lL~rl~~p 1131 (1321)
T 4f4c_A 1104 PGQTLALVGPSGCGKSTVVALLERFYDT 1131 (1321)
T ss_dssp TTCEEEEECSTTSSTTSHHHHHTTSSCC
T ss_pred CCCEEEEECCCCChHHHHHHHHhcCccC
Confidence 5999999999999999999999999863
No 146
>3kta_A Chromosome segregation protein SMC; structural maintenance of chromosomes, ABC ATPase, CFTR adenylate kinase, AP5A, transferase; HET: AP5; 1.63A {Pyrococcus furiosus} PDB: 1xex_A* 1xew_X*
Probab=98.49 E-value=1.1e-07 Score=58.34 Aligned_cols=24 Identities=21% Similarity=0.369 Sum_probs=22.1
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
+.+|+||||||||||+++|...+.
T Consensus 28 ~~~i~G~NGsGKStll~ai~~~l~ 51 (182)
T 3kta_A 28 FTAIVGANGSGKSNIGDAILFVLG 51 (182)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHTT
T ss_pred cEEEECCCCCCHHHHHHHHHHHHc
Confidence 899999999999999999988764
No 147
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=98.49 E-value=5.2e-08 Score=75.48 Aligned_cols=28 Identities=32% Similarity=0.494 Sum_probs=26.2
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
+|+.++|+||||||||||++.|.+.+++
T Consensus 443 ~G~~vaivG~sGsGKSTll~ll~~~~~~ 470 (1321)
T 4f4c_A 443 AGQTVALVGSSGCGKSTIISLLLRYYDV 470 (1321)
T ss_dssp TTCEEEEEECSSSCHHHHHHHHTTSSCC
T ss_pred CCcEEEEEecCCCcHHHHHHHhcccccc
Confidence 5999999999999999999999999974
No 148
>1pui_A ENGB, probable GTP-binding protein ENGB; structural genomics, nysgxrc T16, GTPase, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.37.1.8
Probab=98.49 E-value=3.8e-08 Score=61.32 Aligned_cols=29 Identities=21% Similarity=0.330 Sum_probs=24.5
Q ss_pred CCCCCcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 2 PPLKRKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 2 ~~~~g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
+..++..++|+|+||||||||+++|++..
T Consensus 22 ~~~~~~~v~lvG~~g~GKSTLl~~l~g~~ 50 (210)
T 1pui_A 22 PSDTGIEVAFAGRSNAGKSSALNTLTNQK 50 (210)
T ss_dssp SCSCSEEEEEEECTTSSHHHHHTTTCCC-
T ss_pred CCCCCcEEEEECCCCCCHHHHHHHHhCCC
Confidence 34468889999999999999999998765
No 149
>1ukz_A Uridylate kinase; transferase; HET: ADP AMP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1uky_A*
Probab=98.49 E-value=1.4e-07 Score=58.83 Aligned_cols=28 Identities=21% Similarity=0.341 Sum_probs=24.5
Q ss_pred CCCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 4 LKRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 4 ~~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
.+..+|+|.|++||||||+++.|...+.
T Consensus 13 ~~~~~I~l~G~~GsGKsT~~~~L~~~~g 40 (203)
T 1ukz_A 13 DQVSVIFVLGGPGAGKGTQCEKLVKDYS 40 (203)
T ss_dssp TTCEEEEEECSTTSSHHHHHHHHHHHSS
T ss_pred CCCcEEEEECCCCCCHHHHHHHHHHHcC
Confidence 3567899999999999999999998764
No 150
>1odf_A YGR205W, hypothetical 33.3 kDa protein in ADE3-Ser2 intergenic region; yeast protein, ATP binding protein; 2.25A {Saccharomyces cerevisiae} SCOP: c.37.1.6
Probab=98.49 E-value=8.8e-08 Score=63.72 Aligned_cols=27 Identities=22% Similarity=0.165 Sum_probs=24.5
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
++.+++|+||||||||||++.|.+.+.
T Consensus 30 ~~~ii~I~G~sGsGKSTla~~L~~~l~ 56 (290)
T 1odf_A 30 CPLFIFFSGPQGSGKSFTSIQIYNHLM 56 (290)
T ss_dssp SCEEEEEECCTTSSHHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHhh
Confidence 567899999999999999999998875
No 151
>2qm8_A GTPase/ATPase; G protein, G3E, metallochaperone, chaperone; HET: MSE; 1.70A {Methylobacterium extorquens} SCOP: c.37.1.10 PDB: 2qm7_A*
Probab=98.49 E-value=9.5e-08 Score=64.66 Aligned_cols=26 Identities=23% Similarity=0.324 Sum_probs=24.1
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
+|.+++|+||||||||||+++|++.+
T Consensus 54 ~g~~v~i~G~~GaGKSTLl~~l~g~~ 79 (337)
T 2qm8_A 54 RAIRVGITGVPGVGKSTTIDALGSLL 79 (337)
T ss_dssp CSEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHhh
Confidence 58899999999999999999999765
No 152
>2v54_A DTMP kinase, thymidylate kinase; nucleotide biosynthesis, ATP-binding, nucleotide-binding, poxvirus, transferase; HET: TYD POP; 2.4A {Vaccinia virus copenhagen} PDB: 2w0s_A*
Probab=98.48 E-value=1.4e-07 Score=58.63 Aligned_cols=27 Identities=22% Similarity=0.348 Sum_probs=24.7
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
+|.+|+|.|++||||||+++.|.+.+.
T Consensus 3 ~~~~I~l~G~~GsGKsT~~~~L~~~l~ 29 (204)
T 2v54_A 3 RGALIVFEGLDKSGKTTQCMNIMESIP 29 (204)
T ss_dssp CCCEEEEECCTTSSHHHHHHHHHHTSC
T ss_pred CCcEEEEEcCCCCCHHHHHHHHHHHHC
Confidence 478999999999999999999998873
No 153
>2iw3_A Elongation factor 3A; acetylation, ATP-binding, protein biosynthesis, nucleotide-binding, phosphorylation, RNA- binding, rRNA-binding; HET: ADP; 2.4A {Saccharomyces cerevisiae} PDB: 2iwh_A* 2ix3_A 2ix8_A
Probab=98.48 E-value=4.3e-08 Score=74.20 Aligned_cols=28 Identities=29% Similarity=0.349 Sum_probs=26.1
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
.|++++|+||||||||||++.|++.+++
T Consensus 698 ~GeivaIiGpNGSGKSTLLklLaGll~P 725 (986)
T 2iw3_A 698 LSSRIAVIGPNGAGKSTLINVLTGELLP 725 (986)
T ss_dssp TTCEEEECSCCCHHHHHHHHHHTTSSCC
T ss_pred CCCEEEEECCCCCCHHHHHHHHhCCCCC
Confidence 6899999999999999999999999864
No 154
>3iij_A Coilin-interacting nuclear ATPase protein; alpha and beta proteins (A/B), protein binding, transferase, phosphotransferase; HET: ADP; 1.76A {Homo sapiens} SCOP: c.37.1.1 PDB: 3iik_A 3iil_A* 3iim_A* 1rkb_A
Probab=98.47 E-value=9.9e-08 Score=58.52 Aligned_cols=27 Identities=33% Similarity=0.449 Sum_probs=23.8
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
+++.|+|+|++||||||+++.|...+.
T Consensus 10 ~~~~i~i~G~~GsGKst~~~~l~~~~~ 36 (180)
T 3iij_A 10 LLPNILLTGTPGVGKTTLGKELASKSG 36 (180)
T ss_dssp CCCCEEEECSTTSSHHHHHHHHHHHHC
T ss_pred cCCeEEEEeCCCCCHHHHHHHHHHHhC
Confidence 467899999999999999999987764
No 155
>1jjv_A Dephospho-COA kinase; P-loop nucleotide-binding fold, structure 2 function project, S2F, structural genomics, transferase; HET: ATP; 2.00A {Haemophilus influenzae} SCOP: c.37.1.1
Probab=98.47 E-value=1e-07 Score=59.63 Aligned_cols=22 Identities=23% Similarity=0.430 Sum_probs=20.6
Q ss_pred cEEEEEcCCCCCHHHHHHHHHh
Q psy4405 7 KTIALVGCQGVGRRTLKARLIN 28 (91)
Q Consensus 7 ~~i~l~GpsGaGKsTl~~~L~~ 28 (91)
.+++|+||+||||||+++.|.+
T Consensus 3 ~~i~l~G~~GsGKST~~~~La~ 24 (206)
T 1jjv_A 3 YIVGLTGGIGSGKTTIANLFTD 24 (206)
T ss_dssp EEEEEECSTTSCHHHHHHHHHT
T ss_pred cEEEEECCCCCCHHHHHHHHHH
Confidence 4799999999999999999987
No 156
>2wwf_A Thymidilate kinase, putative; transferase, malaria; HET: TMP ADP; 1.89A {Plasmodium falciparum} PDB: 2wwg_A* 2wwh_A* 2wwi_A*
Probab=98.47 E-value=1e-07 Score=59.53 Aligned_cols=27 Identities=26% Similarity=0.266 Sum_probs=24.3
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
++.+|+|.|++||||||+++.|.+.+.
T Consensus 9 ~~~~I~l~G~~GsGKST~~~~L~~~l~ 35 (212)
T 2wwf_A 9 KGKFIVFEGLDRSGKSTQSKLLVEYLK 35 (212)
T ss_dssp CSCEEEEEESTTSSHHHHHHHHHHHHH
T ss_pred cCCEEEEEcCCCCCHHHHHHHHHHHHH
Confidence 578999999999999999999998753
No 157
>1cr0_A DNA primase/helicase; RECA-type protein fold, transferase; HET: DNA; 2.30A {Enterobacteria phage T7} SCOP: c.37.1.11 PDB: 1cr1_A* 1cr2_A* 1cr4_A* 1e0j_A* 1e0k_A*
Probab=98.46 E-value=1.1e-07 Score=62.70 Aligned_cols=27 Identities=15% Similarity=0.168 Sum_probs=24.9
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
+|++++|+||||+|||||++.|+....
T Consensus 34 ~G~~~~i~G~~G~GKTTl~~~ia~~~~ 60 (296)
T 1cr0_A 34 GGEVIMVTSGSGMGKSTFVRQQALQWG 60 (296)
T ss_dssp TTCEEEEEESTTSSHHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHH
Confidence 589999999999999999999998774
No 158
>2f1r_A Molybdopterin-guanine dinucleotide biosynthesis protein B (MOBB); structural genomics, PSI, protein structure initiative; 2.10A {Archaeoglobus fulgidus}
Probab=98.46 E-value=3e-08 Score=61.46 Aligned_cols=25 Identities=24% Similarity=0.405 Sum_probs=23.2
Q ss_pred cEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 7 KTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 7 ~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
++++|+|+||||||||++.|.+.+.
T Consensus 3 ~~v~IvG~SGsGKSTL~~~L~~~~~ 27 (171)
T 2f1r_A 3 LILSIVGTSDSGKTTLITRMMPILR 27 (171)
T ss_dssp CEEEEEESCHHHHHHHHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHhh
Confidence 5899999999999999999999885
No 159
>3nwj_A ATSK2; P loop, shikimate, nucleoside monophosphate kinase, shikimat ATP binding, chloroplast, transferase; 2.35A {Arabidopsis thaliana}
Probab=98.44 E-value=9.3e-08 Score=62.46 Aligned_cols=27 Identities=26% Similarity=0.389 Sum_probs=24.3
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
+|+.++|+|++||||||++++|++.+.
T Consensus 47 ~g~~i~l~G~~GsGKSTl~~~La~~lg 73 (250)
T 3nwj_A 47 NGRSMYLVGMMGSGKTTVGKIMARSLG 73 (250)
T ss_dssp TTCCEEEECSTTSCHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHhcC
Confidence 488999999999999999999998653
No 160
>2plr_A DTMP kinase, probable thymidylate kinase; TMP-binding, ATP-binding, structural GEN NPPSFA; HET: 1PE PGE EPE PG4; 1.60A {Sulfolobus tokodaii}
Probab=98.44 E-value=1.3e-07 Score=58.82 Aligned_cols=27 Identities=26% Similarity=0.276 Sum_probs=24.4
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
++.+|+|.|++||||||+++.|...+.
T Consensus 3 ~~~~I~i~G~~GsGKsT~~~~L~~~l~ 29 (213)
T 2plr_A 3 KGVLIAFEGIDGSGKSSQATLLKDWIE 29 (213)
T ss_dssp CCEEEEEECCTTSSHHHHHHHHHHHHT
T ss_pred CCeEEEEEcCCCCCHHHHHHHHHHHHh
Confidence 467999999999999999999998765
No 161
>3lw7_A Adenylate kinase related protein (ADKA-like); AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 2.30A {Sulfolobus solfataricus} PDB: 3h0k_A
Probab=98.43 E-value=1.6e-07 Score=56.52 Aligned_cols=24 Identities=25% Similarity=0.440 Sum_probs=21.0
Q ss_pred cEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 7 KTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 7 ~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
.+|+|+||+||||||+++.| ..+.
T Consensus 2 ~~I~l~G~~GsGKsT~a~~L-~~~g 25 (179)
T 3lw7_A 2 KVILITGMPGSGKSEFAKLL-KERG 25 (179)
T ss_dssp CEEEEECCTTSCHHHHHHHH-HHTT
T ss_pred cEEEEECCCCCCHHHHHHHH-HHCC
Confidence 37899999999999999999 6553
No 162
>2iw3_A Elongation factor 3A; acetylation, ATP-binding, protein biosynthesis, nucleotide-binding, phosphorylation, RNA- binding, rRNA-binding; HET: ADP; 2.4A {Saccharomyces cerevisiae} PDB: 2iwh_A* 2ix3_A 2ix8_A
Probab=98.43 E-value=1.3e-07 Score=71.55 Aligned_cols=24 Identities=25% Similarity=0.512 Sum_probs=22.6
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHh
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLIN 28 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~ 28 (91)
+|++++|+||||||||||+++|++
T Consensus 460 ~Ge~v~LiGpNGsGKSTLLk~Lag 483 (986)
T 2iw3_A 460 RARRYGICGPNGCGKSTLMRAIAN 483 (986)
T ss_dssp TTCEEEEECSTTSSHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHhC
Confidence 689999999999999999999984
No 163
>2yvu_A Probable adenylyl-sulfate kinase; transferase, structural genomics, NPPSFA, national P protein structural and functional analyses; 2.10A {Aeropyrum pernix}
Probab=98.42 E-value=1.7e-07 Score=57.75 Aligned_cols=27 Identities=30% Similarity=0.415 Sum_probs=24.5
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
+|.+++|+|++||||||+++.|...+.
T Consensus 12 ~~~~i~l~G~~GsGKsT~~~~L~~~l~ 38 (186)
T 2yvu_A 12 KGIVVWLTGLPGSGKTTIATRLADLLQ 38 (186)
T ss_dssp CCEEEEEECCTTSSHHHHHHHHHHHHH
T ss_pred CCcEEEEEcCCCCCHHHHHHHHHHHHH
Confidence 578999999999999999999988763
No 164
>3v9p_A DTMP kinase, thymidylate kinase; ssgcid, STRU genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia thailandensis}
Probab=98.42 E-value=1.2e-08 Score=65.98 Aligned_cols=83 Identities=16% Similarity=0.146 Sum_probs=45.1
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCcCc---cccccccCCCCccchhcCC---ceEe---eCccc-----cccccccC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPEKF---AAVIPYTTRPMRELEENGQ---NYWF---TSREV-----NVGLAGTY 70 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~~~---~~~v~~~tr~~~~~~~~~~---~~~~---~~~~~-----~~~~yg~~ 70 (91)
+|.+|+|.||+||||||+++.|.+.+...+ +..+ ..+|.|...+. +. .+.. .+... ..+.|...
T Consensus 24 ~g~~I~~eG~~GsGKsT~~~~l~~~l~~~~~~~g~~v-~~~rep~~t~~-g~~ir~~l~~~~~~~~~~~llf~a~R~~~~ 101 (227)
T 3v9p_A 24 RGKFITFEGIDGAGKTTHLQWFCDRLQERLGPAGRHV-VVTREPGGTRL-GETLREILLNQPMDLETEALLMFAGRREHL 101 (227)
T ss_dssp CCCEEEEECCC---CHHHHHHHHHHHHHHHGGGTCCE-EEEESSSSSHH-HHHHHHHHHHSCCCHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHHhhccccceee-eeecCCCCChH-HHHHHHHHHcCCCCHHHHHHHHHHHHHHHH
Confidence 588999999999999999999998875211 3333 34565542211 10 0000 01111 22333333
Q ss_pred HHHHHHHHHhCCCeEeccc
Q psy4405 71 IPMYHSEIRAYPPVEIPQI 89 (91)
Q Consensus 71 ~~~i~~~~~~g~~~~~~~~ 89 (91)
.+.+...+++|+.|+.-.|
T Consensus 102 ~~~i~p~l~~g~~VI~DRy 120 (227)
T 3v9p_A 102 ALVIEPALARGDWVVSDRF 120 (227)
T ss_dssp HHTHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHcCCEEEEecc
Confidence 4456677888988776544
No 165
>2if2_A Dephospho-COA kinase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 3.00A {Aquifex aeolicus}
Probab=98.42 E-value=1.5e-07 Score=58.70 Aligned_cols=22 Identities=32% Similarity=0.495 Sum_probs=20.5
Q ss_pred cEEEEEcCCCCCHHHHHHHHHh
Q psy4405 7 KTIALVGCQGVGRRTLKARLIN 28 (91)
Q Consensus 7 ~~i~l~GpsGaGKsTl~~~L~~ 28 (91)
.+++|+|++||||||+++.|.+
T Consensus 2 ~~i~i~G~~GsGKSTl~~~L~~ 23 (204)
T 2if2_A 2 KRIGLTGNIGCGKSTVAQMFRE 23 (204)
T ss_dssp CEEEEEECTTSSHHHHHHHHHH
T ss_pred eEEEEECCCCcCHHHHHHHHHH
Confidence 3789999999999999999998
No 166
>1n0w_A DNA repair protein RAD51 homolog 1; DNA repair, homologous recombination, breast cancer susceptibility, RECA-like ATPase, protein complex; HET: DNA MSE; 1.70A {Homo sapiens} SCOP: c.37.1.11
Probab=98.42 E-value=1.9e-07 Score=59.31 Aligned_cols=25 Identities=12% Similarity=0.155 Sum_probs=23.4
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhh
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINS 29 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~ 29 (91)
+|++++|+||||||||||++.|+..
T Consensus 23 ~G~~~~i~G~~GsGKTtl~~~l~~~ 47 (243)
T 1n0w_A 23 TGSITEMFGEFRTGKTQICHTLAVT 47 (243)
T ss_dssp TTSEEEEECCTTSSHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCcHHHHHHHHHHH
Confidence 5899999999999999999999984
No 167
>2c95_A Adenylate kinase 1; transferase, AP4A, nucleotide kinase, transferase ATP-bindi; HET: B4P; 1.71A {Homo sapiens} PDB: 1z83_A* 3adk_A
Probab=98.42 E-value=1.1e-07 Score=58.64 Aligned_cols=27 Identities=26% Similarity=0.407 Sum_probs=24.1
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
++.+|+|+|++||||||+++.|...+.
T Consensus 8 ~~~~I~l~G~~GsGKsT~~~~La~~l~ 34 (196)
T 2c95_A 8 KTNIIFVVGGPGSGKGTQCEKIVQKYG 34 (196)
T ss_dssp TSCEEEEEECTTSSHHHHHHHHHHHHC
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHhC
Confidence 467999999999999999999988764
No 168
>2vli_A Antibiotic resistance protein; transferase, tunicamycin, phosphotransferase; 1.95A {Deinococcus radiodurans}
Probab=98.41 E-value=1.2e-07 Score=58.03 Aligned_cols=27 Identities=26% Similarity=0.327 Sum_probs=19.8
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
++.+|+|.|++||||||+++.|.+.+.
T Consensus 4 ~~~~I~l~G~~GsGKST~a~~La~~l~ 30 (183)
T 2vli_A 4 RSPIIWINGPFGVGKTHTAHTLHERLP 30 (183)
T ss_dssp -CCEEEEECCC----CHHHHHHHHHST
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHhcC
Confidence 567899999999999999999998764
No 169
>2p5t_B PEZT; postsegregational killing system, phosphoryltransferase, HEL helix motif, transcription regulator; 3.20A {Streptococcus pneumoniae}
Probab=98.41 E-value=1.6e-07 Score=60.95 Aligned_cols=27 Identities=22% Similarity=0.241 Sum_probs=24.5
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
++.+++|+|++||||||+++.|.+.+.
T Consensus 31 ~~~~i~l~G~~GsGKSTla~~L~~~l~ 57 (253)
T 2p5t_B 31 QPIAILLGGQSGAGKTTIHRIKQKEFQ 57 (253)
T ss_dssp SCEEEEEESCGGGTTHHHHHHHHHHTT
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHhcC
Confidence 467899999999999999999998874
No 170
>4eaq_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, MTBI, transferase; HET: ATM; 1.85A {Staphylococcus aureus subsp} PDB: 4dwj_A* 4f4i_A
Probab=98.40 E-value=2.3e-07 Score=59.59 Aligned_cols=27 Identities=19% Similarity=0.248 Sum_probs=25.4
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
+|.+|+|.||+||||||++++|.+.+.
T Consensus 25 ~g~~i~i~G~~GsGKsT~~~~l~~~l~ 51 (229)
T 4eaq_A 25 MSAFITFEGPEGSGKTTVINEVYHRLV 51 (229)
T ss_dssp CCEEEEEECCTTSCHHHHHHHHHHHHT
T ss_pred CCeEEEEEcCCCCCHHHHHHHHHHHHh
Confidence 688999999999999999999999886
No 171
>2x8a_A Nuclear valosin-containing protein-like; nuclear protein; 2.60A {Homo sapiens}
Probab=98.39 E-value=2.4e-07 Score=60.94 Aligned_cols=23 Identities=26% Similarity=0.444 Sum_probs=21.7
Q ss_pred EEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 9 IALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 9 i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
++|+||||+|||||+++|++...
T Consensus 47 vlL~Gp~GtGKTtLakala~~~~ 69 (274)
T 2x8a_A 47 VLLAGPPGCGKTLLAKAVANESG 69 (274)
T ss_dssp EEEESSTTSCHHHHHHHHHHHTT
T ss_pred EEEECCCCCcHHHHHHHHHHHcC
Confidence 89999999999999999999875
No 172
>1tev_A UMP-CMP kinase; ploop, NMP binding region, LID region, conformational changes, transferase; 2.10A {Homo sapiens} SCOP: c.37.1.1
Probab=98.39 E-value=1.8e-07 Score=57.50 Aligned_cols=26 Identities=23% Similarity=0.385 Sum_probs=23.1
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
+.+|+|.|++||||||+++.|...+.
T Consensus 3 ~~~I~l~G~~GsGKsT~a~~L~~~~~ 28 (196)
T 1tev_A 3 PLVVFVLGGPGAGKGTQCARIVEKYG 28 (196)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHHHC
T ss_pred ceEEEEECCCCCCHHHHHHHHHHHhC
Confidence 56899999999999999999987653
No 173
>2cvh_A DNA repair and recombination protein RADB; filament formation, homologous recombination, ATPase domain, hyperthermophIle; HET: DNA; 2.20A {Thermococcus kodakarensis} PDB: 2cvf_A*
Probab=98.39 E-value=2.7e-07 Score=57.79 Aligned_cols=24 Identities=17% Similarity=0.048 Sum_probs=22.7
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHh
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLIN 28 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~ 28 (91)
+|++++|+||||+|||||+..|+.
T Consensus 19 ~G~~~~i~G~~GsGKTtl~~~l~~ 42 (220)
T 2cvh_A 19 PGVLTQVYGPYASGKTTLALQTGL 42 (220)
T ss_dssp TTSEEEEECSTTSSHHHHHHHHHH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHH
Confidence 589999999999999999999987
No 174
>3umf_A Adenylate kinase; rossmann fold, transferase; 2.05A {Schistosoma mansoni}
Probab=98.39 E-value=1.8e-07 Score=60.00 Aligned_cols=27 Identities=30% Similarity=0.420 Sum_probs=24.6
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
+.++|+|+||+||||+|.++.|++.+.
T Consensus 28 k~kiI~llGpPGsGKgTqa~~L~~~~g 54 (217)
T 3umf_A 28 KAKVIFVLGGPGSGKGTQCEKLVQKFH 54 (217)
T ss_dssp SCEEEEEECCTTCCHHHHHHHHHHHHC
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHHHC
Confidence 568999999999999999999998874
No 175
>1uf9_A TT1252 protein; P-loop, nucleotide binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ATP; 2.80A {Thermus thermophilus} SCOP: c.37.1.1
Probab=98.39 E-value=2.6e-07 Score=57.26 Aligned_cols=25 Identities=28% Similarity=0.337 Sum_probs=22.9
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhh
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINS 29 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~ 29 (91)
+..+|+|+|++||||||+++.|.+.
T Consensus 7 ~~~~I~i~G~~GsGKST~~~~La~~ 31 (203)
T 1uf9_A 7 HPIIIGITGNIGSGKSTVAALLRSW 31 (203)
T ss_dssp CCEEEEEEECTTSCHHHHHHHHHHT
T ss_pred CceEEEEECCCCCCHHHHHHHHHHC
Confidence 5678999999999999999999886
No 176
>1m7g_A Adenylylsulfate kinase; APS kinase, transferase, sulfate Met nucleotide 2 kinase; HET: AV2 ADX ADP; 1.43A {Penicillium chrysogenum} SCOP: c.37.1.4 PDB: 1d6j_A* 1m7h_A* 3cr7_A*
Probab=98.39 E-value=1.9e-07 Score=58.84 Aligned_cols=27 Identities=30% Similarity=0.309 Sum_probs=24.5
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
+|.+++|+|++||||||+++.|.+.+.
T Consensus 24 ~~~~i~~~G~~GsGKsT~~~~l~~~l~ 50 (211)
T 1m7g_A 24 RGLTIWLTGLSASGKSTLAVELEHQLV 50 (211)
T ss_dssp SCEEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHhc
Confidence 578999999999999999999988764
No 177
>1nks_A Adenylate kinase; thermophilic, transferase; HET: AMP ADP; 2.57A {Sulfolobus acidocaldarius} SCOP: c.37.1.1
Probab=98.38 E-value=1.7e-07 Score=57.55 Aligned_cols=25 Identities=28% Similarity=0.347 Sum_probs=22.5
Q ss_pred cEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 7 KTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 7 ~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
++|+|.|++||||||+++.|...+.
T Consensus 2 ~~I~i~G~~GsGKsT~~~~L~~~l~ 26 (194)
T 1nks_A 2 KIGIVTGIPGVGKSTVLAKVKEILD 26 (194)
T ss_dssp EEEEEEECTTSCHHHHHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHH
Confidence 4789999999999999999998764
No 178
>3ux8_A Excinuclease ABC, A subunit; UVRA, nucleotide excision repair, DNA repair, ABC ATPase, DN binding protein; HET: ADP; 2.10A {Geobacillus}
Probab=98.38 E-value=1e-07 Score=69.35 Aligned_cols=23 Identities=26% Similarity=0.481 Sum_probs=20.7
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHH
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLI 27 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~ 27 (91)
+|++++|+||||||||||++.|.
T Consensus 347 ~Ge~vaIiGpnGsGKSTLl~~i~ 369 (670)
T 3ux8_A 347 LGTFVAVTGVSGSGKSTLVNEVL 369 (670)
T ss_dssp TTSEEEEECSTTSSHHHHHTTTH
T ss_pred CCCEEEEEeeCCCCHHHHHHHHH
Confidence 58999999999999999998654
No 179
>2cdn_A Adenylate kinase; phosphoryl transfer, associative mechanism, ATP-binding, nucleotide biosynthesis, nucleotide-binding, transferase; HET: ADP; 1.9A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1p4s_A
Probab=98.38 E-value=2.6e-07 Score=57.61 Aligned_cols=28 Identities=21% Similarity=0.283 Sum_probs=24.2
Q ss_pred CCCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 4 LKRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 4 ~~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
..+.+|+|+|++||||||+++.|.+.+.
T Consensus 18 ~~~~~I~l~G~~GsGKST~a~~La~~l~ 45 (201)
T 2cdn_A 18 GSHMRVLLLGPPGAGKGTQAVKLAEKLG 45 (201)
T ss_dssp CSCCEEEEECCTTSSHHHHHHHHHHHHT
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHhC
Confidence 3566899999999999999999998653
No 180
>3cr8_A Sulfate adenylyltranferase, adenylylsulfate kinase; APS kinase, transferase, sulfate metabolism, nucleotide 2 kinase; 2.95A {Thiobacillus denitrificans}
Probab=98.38 E-value=9e-08 Score=68.67 Aligned_cols=27 Identities=26% Similarity=0.320 Sum_probs=25.1
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
+|++++|+|+||||||||+++|++.+.
T Consensus 368 ~G~iI~LiG~sGSGKSTLar~La~~L~ 394 (552)
T 3cr8_A 368 QGFTVFFTGLSGAGKSTLARALAARLM 394 (552)
T ss_dssp SCEEEEEEESSCHHHHHHHHHHHHHHH
T ss_pred cceEEEEECCCCChHHHHHHHHHHhhc
Confidence 688999999999999999999999874
No 181
>1nij_A Hypothetical protein YJIA; structural genomics, P-loop protein, GTP binding, structure function project, S2F, unknown function; 2.00A {Escherichia coli} SCOP: c.37.1.10 d.237.1.1
Probab=98.38 E-value=1.7e-07 Score=62.86 Aligned_cols=25 Identities=28% Similarity=0.456 Sum_probs=22.8
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-++++|+|+||||||||++.|.+..
T Consensus 4 i~v~~i~G~~GaGKTTll~~l~~~~ 28 (318)
T 1nij_A 4 IAVTLLTGFLGAGKTTLLRHILNEQ 28 (318)
T ss_dssp EEEEEEEESSSSSCHHHHHHHHHSC
T ss_pred ccEEEEEecCCCCHHHHHHHHHhhc
Confidence 4689999999999999999999875
No 182
>1uj2_A Uridine-cytidine kinase 2; alpha/beta mononucleotide-binding HOLD, transferase; HET: C5P ADP; 1.80A {Homo sapiens} SCOP: c.37.1.6 PDB: 1uei_A* 1uej_A* 1udw_A 1ufq_A* 1xrj_A*
Probab=98.37 E-value=3.2e-07 Score=59.30 Aligned_cols=27 Identities=15% Similarity=0.245 Sum_probs=23.7
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
+..+|+|.|++||||||+++.|...+.
T Consensus 21 ~~~iI~I~G~~GSGKST~a~~L~~~lg 47 (252)
T 1uj2_A 21 EPFLIGVSGGTASGKSSVCAKIVQLLG 47 (252)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHTT
T ss_pred CcEEEEEECCCCCCHHHHHHHHHHHhh
Confidence 445899999999999999999998764
No 183
>1oix_A RAS-related protein RAB-11A; small G protein, intracellular trafficking, GTP-binding, lipoprotein, prenylation, protein transport; HET: GDP; 1.7A {Homo sapiens} SCOP: c.37.1.8 PDB: 1oiw_A* 1oiv_A* 3rwo_B* 3rwm_B*
Probab=98.37 E-value=2.6e-07 Score=57.15 Aligned_cols=24 Identities=29% Similarity=0.570 Sum_probs=21.6
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
.++|+|+||||||||+++|.+...
T Consensus 31 kv~lvG~~g~GKSTLl~~l~~~~~ 54 (191)
T 1oix_A 31 KVVLIGDSGVGKSNLLSRFTRNEF 54 (191)
T ss_dssp EEEEEECTTSSHHHHHHHHHHSCC
T ss_pred EEEEECcCCCCHHHHHHHHhcCCC
Confidence 579999999999999999998763
No 184
>1f2t_A RAD50 ABC-ATPase; DNA double-strand break repair, replication; 1.60A {Pyrococcus furiosus} SCOP: c.37.1.12 PDB: 1f2u_A* 1us8_A*
Probab=98.36 E-value=3.6e-07 Score=55.20 Aligned_cols=23 Identities=17% Similarity=0.380 Sum_probs=20.4
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHh
Q psy4405 6 RKTIALVGCQGVGRRTLKARLIN 28 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~ 28 (91)
..+.+|+||||||||||+.+|.-
T Consensus 23 ~g~~~I~G~NGsGKStil~Ai~~ 45 (149)
T 1f2t_A 23 EGINLIIGQNGSGKSSLLDAILV 45 (149)
T ss_dssp SEEEEEECCTTSSHHHHHHHHHH
T ss_pred CCeEEEECCCCCCHHHHHHHHHH
Confidence 45889999999999999999864
No 185
>1via_A Shikimate kinase; structural genomics, transferase; HET: MSE; 1.57A {Campylobacter jejuni} SCOP: c.37.1.2
Probab=98.36 E-value=1.8e-07 Score=57.16 Aligned_cols=24 Identities=29% Similarity=0.486 Sum_probs=21.8
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
.++|+||+||||||+++.|++.+.
T Consensus 6 ~i~i~G~~GsGKsTla~~La~~l~ 29 (175)
T 1via_A 6 NIVFIGFMGSGKSTLARALAKDLD 29 (175)
T ss_dssp CEEEECCTTSCHHHHHHHHHHHHT
T ss_pred EEEEEcCCCCCHHHHHHHHHHHcC
Confidence 689999999999999999998764
No 186
>3r20_A Cytidylate kinase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ADP, DCMP, D transferase; 2.00A {Mycobacterium smegmatis} SCOP: c.37.1.0 PDB: 3r8c_A 4die_A*
Probab=98.36 E-value=2.3e-07 Score=60.16 Aligned_cols=26 Identities=19% Similarity=0.295 Sum_probs=22.9
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
+.+++|.||+||||||+++.|.+.+.
T Consensus 9 ~~~i~i~G~~GsGKsTla~~la~~lg 34 (233)
T 3r20_A 9 SLVVAVDGPAGTGKSSVSRGLARALG 34 (233)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHHHT
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHhC
Confidence 45899999999999999999997653
No 187
>2iyv_A Shikimate kinase, SK; transferase, aromatic amino acid biosynthesis, P-loop kinase, metal- binding, shikimate pathway; HET: ADP; 1.35A {Mycobacterium tuberculosis} SCOP: c.37.1.2 PDB: 2iyr_A* 2iyq_A* 2iyt_A 2iyu_A* 2iys_A* 2iyw_A* 2iyx_A* 2iyy_A* 2iyz_A* 2g1k_A* 1l4y_A* 1u8a_A* 1we2_A* 1zyu_A* 2dfn_A* 2dft_A* 2g1j_A 1l4u_A* 3baf_A*
Probab=98.35 E-value=2e-07 Score=57.25 Aligned_cols=25 Identities=32% Similarity=0.462 Sum_probs=22.1
Q ss_pred cEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 7 KTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 7 ~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
.+|+|+|++||||||+++.|...+.
T Consensus 3 ~~I~l~G~~GsGKsT~a~~La~~lg 27 (184)
T 2iyv_A 3 PKAVLVGLPGSGKSTIGRRLAKALG 27 (184)
T ss_dssp CSEEEECSTTSSHHHHHHHHHHHHT
T ss_pred CeEEEECCCCCCHHHHHHHHHHHcC
Confidence 3699999999999999999998653
No 188
>3ux8_A Excinuclease ABC, A subunit; UVRA, nucleotide excision repair, DNA repair, ABC ATPase, DN binding protein; HET: ADP; 2.10A {Geobacillus}
Probab=98.34 E-value=2.2e-07 Score=67.60 Aligned_cols=19 Identities=32% Similarity=0.630 Sum_probs=18.1
Q ss_pred CCcEEEEEcCCCCCHHHHH
Q psy4405 5 KRKTIALVGCQGVGRRTLK 23 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~ 23 (91)
+|++++|+||||||||||+
T Consensus 43 ~Ge~~~liGpNGaGKSTLl 61 (670)
T 3ux8_A 43 RGKLVVLTGLSGSGKSSLA 61 (670)
T ss_dssp TTSEEEEECSTTSSHHHHH
T ss_pred CCCEEEEECCCCCCHHHHh
Confidence 6899999999999999997
No 189
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=98.34 E-value=3.8e-07 Score=70.57 Aligned_cols=28 Identities=36% Similarity=0.451 Sum_probs=26.2
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
+|+.++|+||||||||||++.|.+.+++
T Consensus 1058 ~Ge~v~ivG~sGsGKSTl~~~l~g~~~p 1085 (1284)
T 3g5u_A 1058 KGQTLALVGSSGCGKSTVVQLLERFYDP 1085 (1284)
T ss_dssp SSSEEEEECSSSTTHHHHHHHHTTSSCC
T ss_pred CCCEEEEECCCCCCHHHHHHHHhcCcCC
Confidence 5999999999999999999999999864
No 190
>2f9l_A RAB11B, member RAS oncogene family; RAB11B GTPase, vesicle transport, hydrolase; HET: GDP; 1.55A {Homo sapiens} SCOP: c.37.1.8 PDB: 2f9m_A* 1yzk_A* 2hv8_A* 2gzd_A* 2gzh_A* 2d7c_A* 3bfk_A*
Probab=98.34 E-value=2.9e-07 Score=57.09 Aligned_cols=23 Identities=30% Similarity=0.650 Sum_probs=21.0
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
.++|+|++|||||||+++|++..
T Consensus 7 kv~lvG~~g~GKSTLl~~l~~~~ 29 (199)
T 2f9l_A 7 KVVLIGDSGVGKSNLLSRFTRNE 29 (199)
T ss_dssp EEEEESSTTSSHHHHHHHHHHSC
T ss_pred EEEEECcCCCCHHHHHHHHhcCC
Confidence 57899999999999999999874
No 191
>1zd8_A GTP:AMP phosphotransferase mitochondrial; ATP:AMP phosphotransferase, myokinase, structural genomics, structural genomics consortium, SGC; 1.48A {Homo sapiens} PDB: 2ak3_A*
Probab=98.34 E-value=3.5e-07 Score=58.12 Aligned_cols=27 Identities=19% Similarity=0.394 Sum_probs=23.6
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
++..|+|+|++||||||+++.|+..+.
T Consensus 6 ~~~~I~l~G~~GsGKsT~a~~La~~l~ 32 (227)
T 1zd8_A 6 RLLRAVIMGAPGSGKGTVSSRITTHFE 32 (227)
T ss_dssp -CCEEEEEECTTSSHHHHHHHHHHHSS
T ss_pred cCcEEEEECCCCCCHHHHHHHHHHHcC
Confidence 457899999999999999999998774
No 192
>2px0_A Flagellar biosynthesis protein FLHF; SRP GTPase, flagellum, protein transport, biosynthetic protein; HET: GNP; 3.00A {Bacillus subtilis} PDB: 2px3_A* 3syn_A*
Probab=98.34 E-value=2.5e-07 Score=61.62 Aligned_cols=27 Identities=33% Similarity=0.448 Sum_probs=24.7
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
++++++|+||||+||||++..|+..+.
T Consensus 104 ~g~vi~lvG~~GsGKTTl~~~LA~~l~ 130 (296)
T 2px0_A 104 HSKYIVLFGSTGAGKTTTLAKLAAISM 130 (296)
T ss_dssp CSSEEEEEESTTSSHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHHHH
Confidence 578999999999999999999998774
No 193
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=98.34 E-value=2.5e-07 Score=71.62 Aligned_cols=28 Identities=29% Similarity=0.362 Sum_probs=26.1
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
+|+.++|+||||||||||++.|.+.+++
T Consensus 415 ~G~~~~ivG~sGsGKSTl~~ll~g~~~~ 442 (1284)
T 3g5u_A 415 SGQTVALVGNSGCGKSTTVQLMQRLYDP 442 (1284)
T ss_dssp TTCEEEEECCSSSSHHHHHHHTTTSSCC
T ss_pred CCCEEEEECCCCCCHHHHHHHHhCCCCC
Confidence 5999999999999999999999999864
No 194
>1tf7_A KAIC; homohexamer, hexamer, circadian clock protein; HET: ATP; 2.80A {Synechococcus SP} SCOP: c.37.1.11 c.37.1.11 PDB: 3s1a_A* 1u9i_A* 2gbl_A* 3dvl_A* 3k0a_A* 3k09_A* 3jzm_A* 3k0e_A* 4dug_A* 3ua2_A* 3k0c_A* 3k0f_A*
Probab=98.34 E-value=3e-07 Score=65.22 Aligned_cols=27 Identities=11% Similarity=0.201 Sum_probs=23.7
Q ss_pred CCcEEEEEcCCCCCHHHHHHH--HHhhCC
Q psy4405 5 KRKTIALVGCQGVGRRTLKAR--LINSNP 31 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~--L~~~~~ 31 (91)
+|++++|+||||||||||+++ +.+..+
T Consensus 38 ~Ge~~~l~G~nGsGKSTL~~~~ll~Gl~~ 66 (525)
T 1tf7_A 38 IGRSTLVSGTSGTGKTLFSIQFLYNGIIE 66 (525)
T ss_dssp TTSEEEEEESTTSSHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEcCCCCCHHHHHHHHHHHHHHh
Confidence 589999999999999999999 556654
No 195
>2jaq_A Deoxyguanosine kinase; transferase, deoxyribonucleoside kinase; HET: DCP; 2.3A {Mycoplasma mycoides subsp} PDB: 2jat_A* 2jas_A*
Probab=98.34 E-value=2.9e-07 Score=56.98 Aligned_cols=24 Identities=29% Similarity=0.491 Sum_probs=21.9
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
.|+|.|++||||||+++.|.+.+.
T Consensus 2 ~I~i~G~~GsGKsT~~~~L~~~l~ 25 (205)
T 2jaq_A 2 KIAIFGTVGAGKSTISAEISKKLG 25 (205)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHC
T ss_pred EEEEECCCccCHHHHHHHHHHhcC
Confidence 689999999999999999998764
No 196
>2bwj_A Adenylate kinase 5; phosphoryl transfer reaction, transferase; HET: AMP; 2.3A {Homo sapiens}
Probab=98.33 E-value=2.8e-07 Score=56.97 Aligned_cols=26 Identities=27% Similarity=0.414 Sum_probs=23.5
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
+.+|+|+|++||||||+++.|.+.+.
T Consensus 12 ~~~I~l~G~~GsGKsT~a~~L~~~l~ 37 (199)
T 2bwj_A 12 CKIIFIIGGPGSGKGTQCEKLVEKYG 37 (199)
T ss_dssp SCEEEEEECTTSSHHHHHHHHHHHHT
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHhC
Confidence 56899999999999999999998764
No 197
>1nlf_A Regulatory protein REPA; replicative DNA helicase structural changes, replication; 1.95A {Escherichia coli} SCOP: c.37.1.11 PDB: 1g8y_A 1olo_A
Probab=98.33 E-value=3.5e-07 Score=59.86 Aligned_cols=26 Identities=27% Similarity=0.254 Sum_probs=23.6
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
+|++++|+||||||||||+..|+...
T Consensus 29 ~G~i~~i~G~~GsGKTtl~~~l~~~~ 54 (279)
T 1nlf_A 29 AGTVGALVSPGGAGKSMLALQLAAQI 54 (279)
T ss_dssp TTSEEEEEESTTSSHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCHHHHHHHHHHHH
Confidence 58999999999999999999998754
No 198
>1zak_A Adenylate kinase; ATP:AMP-phosphotransferase, transferase; HET: AP5; 3.50A {Zea mays} SCOP: c.37.1.1 g.41.2.1
Probab=98.33 E-value=2.6e-07 Score=58.48 Aligned_cols=27 Identities=11% Similarity=0.152 Sum_probs=24.0
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
++..|+|+||+||||||+++.|+..+.
T Consensus 4 ~~~~I~l~G~~GsGKsT~~~~La~~l~ 30 (222)
T 1zak_A 4 DPLKVMISGAPASGKGTQCELIKTKYQ 30 (222)
T ss_dssp CSCCEEEEESTTSSHHHHHHHHHHHHC
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHhC
Confidence 456899999999999999999998774
No 199
>1gtv_A TMK, thymidylate kinase; transferase, transferase (ATP:TMP phosphotransferase); HET: TYD TMP; 1.55A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1g3u_A* 1gsi_A* 1mrn_A* 1mrs_A* 1n5i_A* 1n5j_A* 1n5k_A* 1n5l_A* 1w2g_A* 1w2h_A*
Probab=98.32 E-value=9.5e-08 Score=59.79 Aligned_cols=25 Identities=36% Similarity=0.534 Sum_probs=22.6
Q ss_pred cEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 7 KTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 7 ~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
++|+|.|++||||||+++.|.+.+.
T Consensus 1 ~~I~i~G~~GsGKsTl~~~L~~~l~ 25 (214)
T 1gtv_A 1 MLIAIEGVDGAGKRTLVEKLSGAFR 25 (214)
T ss_dssp CEEEEEEEEEEEHHHHHHHHHHHHH
T ss_pred CEEEEEcCCCCCHHHHHHHHHHHHH
Confidence 3789999999999999999998774
No 200
>3tlx_A Adenylate kinase 2; structural genomics, structural genomics consortium, SGC, RO fold, transferase, ATP binding, phosphorylation; HET: ADP ATP AMP; 2.75A {Plasmodium falciparum}
Probab=98.31 E-value=3.7e-07 Score=58.96 Aligned_cols=27 Identities=22% Similarity=0.298 Sum_probs=23.9
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
++..|+|+||+||||||++++|.+.+.
T Consensus 28 ~~~~I~l~G~~GsGKsT~a~~L~~~~g 54 (243)
T 3tlx_A 28 PDGRYIFLGAPGSGKGTQSLNLKKSHC 54 (243)
T ss_dssp CCEEEEEECCTTSSHHHHHHHHHHHHC
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHHhC
Confidence 466899999999999999999998764
No 201
>1svm_A Large T antigen; AAA+ fold, viral protein; HET: ATP; 1.94A {Simian virus 40} SCOP: c.37.1.20 PDB: 1svl_A* 1svo_A 1n25_A 2h1l_A
Probab=98.31 E-value=4.6e-07 Score=62.33 Aligned_cols=27 Identities=26% Similarity=0.297 Sum_probs=24.6
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
+|++++|+||+|+|||||++.|++.+.
T Consensus 168 ~~~~i~l~G~~GsGKSTl~~~l~~~~~ 194 (377)
T 1svm_A 168 KKRYWLFKGPIDSGKTTLAAALLELCG 194 (377)
T ss_dssp TCCEEEEECSTTSSHHHHHHHHHHHHC
T ss_pred CCCEEEEECCCCCCHHHHHHHHHhhcC
Confidence 588999999999999999999998764
No 202
>1wb9_A DNA mismatch repair protein MUTS; DNA-binding, ATP-binding, DNA binding, DNA repair, mismatch recognition; HET: DNA ADP; 2.10A {Escherichia coli} SCOP: a.113.1.1 c.37.1.12 c.55.6.1 d.75.2.1 PDB: 1wbb_A* 1e3m_A* 1oh5_A* 1oh6_A* 1oh7_A* 1oh8_A* 1w7a_A* 2wtu_A* 1wbd_A* 1ng9_A* 3k0s_A*
Probab=98.30 E-value=4.2e-07 Score=67.65 Aligned_cols=26 Identities=15% Similarity=0.186 Sum_probs=23.5
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
+|++++|+||||||||||+++|.+..
T Consensus 606 ~g~i~~ItGpNGsGKSTlLr~iagl~ 631 (800)
T 1wb9_A 606 QRRMLIITGPNMGGKSTYMRQTALIA 631 (800)
T ss_dssp SSCEEEEECCTTSSHHHHHHHHHHHH
T ss_pred CCcEEEEECCCCCChHHHHHHHHHHH
Confidence 58899999999999999999988753
No 203
>1np6_A Molybdopterin-guanine dinucleotide biosynthesis protein B; mixed alpha-beta fold, elongated beta-sheet, walker A motif, P-loop structural motif; 1.90A {Escherichia coli} SCOP: c.37.1.10 PDB: 1p9n_A
Probab=98.29 E-value=5.3e-07 Score=55.99 Aligned_cols=26 Identities=27% Similarity=0.350 Sum_probs=23.0
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
-++++|+|+||||||||++.|...+.
T Consensus 6 ~~~i~i~G~sGsGKTTl~~~l~~~l~ 31 (174)
T 1np6_A 6 IPLLAFAAWSGTGKTTLLKKLIPALC 31 (174)
T ss_dssp CCEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred ceEEEEEeCCCCCHHHHHHHHHHhcc
Confidence 45899999999999999999998753
No 204
>1vht_A Dephospho-COA kinase; structural genomics, transferase; HET: BA3; 1.59A {Escherichia coli} SCOP: c.37.1.1 PDB: 1vhl_A* 1viy_A 1t3h_A 1n3b_A
Probab=98.29 E-value=6.3e-07 Score=56.47 Aligned_cols=24 Identities=29% Similarity=0.462 Sum_probs=21.9
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHh
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLIN 28 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~ 28 (91)
++.+|+|.|++||||||+++.|.+
T Consensus 3 ~~~~I~i~G~~GSGKST~~~~L~~ 26 (218)
T 1vht_A 3 LRYIVALTGGIGSGKSTVANAFAD 26 (218)
T ss_dssp CCEEEEEECCTTSCHHHHHHHHHH
T ss_pred CceEEEEECCCCCCHHHHHHHHHH
Confidence 357899999999999999999987
No 205
>1aky_A Adenylate kinase; ATP:AMP phosphotransferase, myokinase, transferase (phosphotransferase); HET: AP5; 1.63A {Saccharomyces cerevisiae} SCOP: c.37.1.1 g.41.2.1 PDB: 2aky_A* 3aky_A* 1dvr_A*
Probab=98.29 E-value=4.6e-07 Score=57.25 Aligned_cols=27 Identities=22% Similarity=0.327 Sum_probs=23.8
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
++..|+|+|++||||||+++.|+..+.
T Consensus 3 ~~~~I~l~G~~GsGKsT~a~~La~~l~ 29 (220)
T 1aky_A 3 ESIRMVLIGPPGAGKGTQAPNLQERFH 29 (220)
T ss_dssp CCCEEEEECCTTSSHHHHHHHHHHHHC
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHHcC
Confidence 456899999999999999999998764
No 206
>3ld9_A DTMP kinase, thymidylate kinase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 2.15A {Ehrlichia chaffeensis}
Probab=98.29 E-value=2.8e-07 Score=59.38 Aligned_cols=45 Identities=20% Similarity=0.118 Sum_probs=31.9
Q ss_pred CCCCCcEEEEEcCCCCCHHHHHHHHHhhCCcCccccccccCCCCc
Q psy4405 2 PPLKRKTIALVGCQGVGRRTLKARLINSNPEKFAAVIPYTTRPMR 46 (91)
Q Consensus 2 ~~~~g~~i~l~GpsGaGKsTl~~~L~~~~~~~~~~~v~~~tr~~~ 46 (91)
...+|.+|+|.|++||||||+++.|.+.+....+..+..+||.|.
T Consensus 17 ~~~~~~~i~~~G~~g~GKst~~~~l~~~l~~~~g~~v~~~treP~ 61 (223)
T 3ld9_A 17 QGPGSMFITFEGIDGSGKTTQSHLLAEYLSEIYGVNNVVLTREPG 61 (223)
T ss_dssp --CCCEEEEEECSTTSSHHHHHHHHHHHHHHHHCGGGEEEEESSC
T ss_pred cCCCCeEEEEECCCCCCHHHHHHHHHHHHhhccCceeeEeeeCCC
Confidence 344788999999999999999999998875202334444356554
No 207
>1vma_A Cell division protein FTSY; TM0570, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics; HET: CIT; 1.60A {Thermotoga maritima} SCOP: a.24.13.1 c.37.1.10
Probab=98.28 E-value=4.3e-07 Score=60.90 Aligned_cols=27 Identities=26% Similarity=0.313 Sum_probs=24.7
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
++++++|+|||||||||++..|+..+.
T Consensus 103 ~~~vi~ivG~~GsGKTTl~~~LA~~l~ 129 (306)
T 1vma_A 103 PPFVIMVVGVNGTGKTTSCGKLAKMFV 129 (306)
T ss_dssp SCEEEEEECCTTSSHHHHHHHHHHHHH
T ss_pred CCeEEEEEcCCCChHHHHHHHHHHHHH
Confidence 578999999999999999999998874
No 208
>1pzn_A RAD51, DNA repair and recombination protein RAD51, RADA; heptameric ring, heptamer, ring, oligomer, RAD51 polymerizat motif; HET: DNA; 2.85A {Pyrococcus furiosus} SCOP: a.60.4.1 c.37.1.11
Probab=98.28 E-value=5.4e-07 Score=61.20 Aligned_cols=26 Identities=19% Similarity=0.227 Sum_probs=24.6
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
+|+++.|+||||||||||++.|+...
T Consensus 130 ~G~i~~I~G~~GsGKTTL~~~l~~~~ 155 (349)
T 1pzn_A 130 TQAITEVFGEFGSGKTQLAHTLAVMV 155 (349)
T ss_dssp SSEEEEEEESTTSSHHHHHHHHHHHT
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHh
Confidence 58999999999999999999999887
No 209
>1ewq_A DNA mismatch repair protein MUTS; multiple domains of protein, mostly mixed alpha-beta structures, one domain is entirely helical; HET: DNA; 2.20A {Thermus aquaticus} SCOP: a.113.1.1 c.37.1.12 c.55.6.1 d.75.2.1 PDB: 1nne_A* 1fw6_A* 1ewr_A*
Probab=98.28 E-value=4.8e-07 Score=67.06 Aligned_cols=25 Identities=12% Similarity=0.151 Sum_probs=23.0
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
|++++|+||||||||||++.|.+..
T Consensus 576 g~i~~I~GpNGsGKSTlLr~iagl~ 600 (765)
T 1ewq_A 576 HELVLITGPNMAGKSTFLRQTALIA 600 (765)
T ss_dssp SCEEEEESCSSSSHHHHHHHHHHHH
T ss_pred CcEEEEECCCCCChHHHHHHHHhhh
Confidence 7899999999999999999998764
No 210
>1q3t_A Cytidylate kinase; nucleotide monophosphate kinase, CMP kinase, transferase; NMR {Streptococcus pneumoniae} SCOP: c.37.1.1
Probab=98.28 E-value=5e-07 Score=57.81 Aligned_cols=27 Identities=22% Similarity=0.287 Sum_probs=24.1
Q ss_pred CCCcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 4 LKRKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 4 ~~g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
.++.+++|+|++||||||+++.|.+.+
T Consensus 14 ~~~~~i~i~G~~gsGKst~~~~l~~~l 40 (236)
T 1q3t_A 14 MKTIQIAIDGPASSGKSTVAKIIAKDF 40 (236)
T ss_dssp CCCCEEEEECSSCSSHHHHHHHHHHHH
T ss_pred cCCcEEEEECCCCCCHHHHHHHHHHHc
Confidence 367899999999999999999999855
No 211
>4aby_A DNA repair protein RECN; hydrolase, double strand break repair, ATPase, nucleotide binding domain; HET: DNA; 3.00A {Deinococcus radiodurans}
Probab=98.28 E-value=1.3e-07 Score=64.70 Aligned_cols=26 Identities=19% Similarity=0.102 Sum_probs=23.4
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
+| +++|+||||||||||+++|.....
T Consensus 60 ~G-~~~lvG~NGaGKStLl~aI~~l~~ 85 (415)
T 4aby_A 60 GG-FCAFTGETGAGKSIIVDALGLLLG 85 (415)
T ss_dssp SS-EEEEEESHHHHHHHHTHHHHHHTT
T ss_pred CC-cEEEECCCCCCHHHHHHHHHHHhC
Confidence 57 999999999999999999977764
No 212
>3ake_A Cytidylate kinase; CMP kinase, CMP complex, open conformation, nucleotide metab transferase; HET: C5P; 1.50A {Thermus thermophilus} PDB: 3akc_A* 3akd_A*
Probab=98.28 E-value=5.6e-07 Score=55.92 Aligned_cols=24 Identities=13% Similarity=0.272 Sum_probs=22.0
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
+++|.|++||||||+++.|.+.+.
T Consensus 4 ~i~i~G~~GsGKst~~~~la~~lg 27 (208)
T 3ake_A 4 IVTIDGPSASGKSSVARRVAAALG 27 (208)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHHhcC
Confidence 899999999999999999998653
No 213
>3dl0_A Adenylate kinase; phosphotransferase, zinc coordination, ATP-binding, binding, nucleotide biosynthesis, nucleotide-binding, trans; HET: AP5; 1.58A {Bacillus subtilis} PDB: 1p3j_A* 2ori_A* 2eu8_A* 2oo7_A* 2p3s_A* 2qaj_A* 2osb_A* 3dkv_A* 1zin_A* 1zio_A* 1zip_A* 1s3g_A*
Probab=98.27 E-value=6.3e-07 Score=56.33 Aligned_cols=24 Identities=25% Similarity=0.519 Sum_probs=21.6
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
.|+|+||+||||||++++|++.+.
T Consensus 2 ~I~l~G~~GsGKsT~a~~L~~~~~ 25 (216)
T 3dl0_A 2 NLVLMGLPGAGKGTQGERIVEKYG 25 (216)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHSS
T ss_pred EEEEECCCCCCHHHHHHHHHHHhC
Confidence 478999999999999999988774
No 214
>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A
Probab=98.26 E-value=7.5e-07 Score=58.55 Aligned_cols=24 Identities=38% Similarity=0.703 Sum_probs=22.0
Q ss_pred cEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 7 KTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 7 ~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
.+|+|+|++||||||+++.|...+
T Consensus 3 ~~I~l~G~~GsGKST~a~~L~~~~ 26 (301)
T 1ltq_A 3 KIILTIGCPGSGKSTWAREFIAKN 26 (301)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHS
T ss_pred eEEEEECCCCCCHHHHHHHHHHhC
Confidence 589999999999999999999864
No 215
>1a7j_A Phosphoribulokinase; transferase, calvin cycle; 2.50A {Rhodobacter sphaeroides} SCOP: c.37.1.6
Probab=98.26 E-value=2.2e-07 Score=61.70 Aligned_cols=26 Identities=27% Similarity=0.383 Sum_probs=20.3
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
++.+|+|.||+||||||+++.|...+
T Consensus 4 ~~~iIgItG~sGSGKSTva~~L~~~l 29 (290)
T 1a7j_A 4 KHPIISVTGSSGAGTSTVKHTFDQIF 29 (290)
T ss_dssp TSCEEEEESCC---CCTHHHHHHHHH
T ss_pred CceEEEEECCCCCCHHHHHHHHHHHH
Confidence 56689999999999999999998864
No 216
>3qf7_A RAD50; ABC-ATPase, ATPase, hydrolase; HET: ANP; 1.90A {Thermotoga maritima} PDB: 3qg5_A 3tho_A*
Probab=98.26 E-value=7.2e-07 Score=60.89 Aligned_cols=23 Identities=17% Similarity=0.239 Sum_probs=20.5
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
+++|+||||||||||+++|+-.+
T Consensus 25 ~~~i~G~NGaGKTTll~ai~~al 47 (365)
T 3qf7_A 25 ITVVEGPNGAGKSSLFEAISFAL 47 (365)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHH
T ss_pred eEEEECCCCCCHHHHHHHHHHHh
Confidence 88999999999999999987443
No 217
>3fb4_A Adenylate kinase; psychrophIle, phosphotransferase, ATP-binding, nucleotide-binding, transferase; HET: AP5; 2.00A {Marinibacillus marinus}
Probab=98.26 E-value=5e-07 Score=56.73 Aligned_cols=24 Identities=29% Similarity=0.529 Sum_probs=21.3
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
.|+|+||+||||||+++.|...+.
T Consensus 2 ~I~l~G~~GsGKsT~a~~L~~~~~ 25 (216)
T 3fb4_A 2 NIVLMGLPGAGKGTQAEQIIEKYE 25 (216)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHHHhC
Confidence 478999999999999999987764
No 218
>3kfv_A Tight junction protein ZO-3; structural genomics consortium, SGC, cell junction, cell membrane, membrane, SH3 domain; 2.80A {Homo sapiens}
Probab=98.25 E-value=1.5e-06 Score=58.49 Aligned_cols=63 Identities=8% Similarity=0.095 Sum_probs=47.0
Q ss_pred CCCCCcEEEEEcCCCCCHHHHHHHHHhhCCcCccccccccCCCCccchhcCCceEeeCccccccccccCHHHHHHHHHhC
Q psy4405 2 PPLKRKTIALVGCQGVGRRTLKARLINSNPEKFAAVIPYTTRPMRELEENGQNYWFTSREVNVGLAGTYIPMYHSEIRAY 81 (91)
Q Consensus 2 ~~~~g~~i~l~GpsGaGKsTl~~~L~~~~~~~~~~~v~~~tr~~~~~~~~~~~~~~~~~~~~~~~yg~~~~~i~~~~~~g 81 (91)
++...++++|+|| +|+||.++|+..+|..|+..++. ++. ... +.+ ++.+.|++++++|
T Consensus 141 ~~~~~RPvVl~GP---~k~~l~~~L~~~~P~~F~~~v~~-~r~-------i~~---------~~f--is~~~V~~vl~~G 198 (308)
T 3kfv_A 141 EASFKRPVVILGP---VADIAMQKLTAEMPDQFEIAETV-SRT-------DSP---------SKI--IKLDTVRVIAEKD 198 (308)
T ss_dssp ECSSCCCEEEEST---THHHHHHHHHHHCTTTEEECCCC-------------------------C--CCHHHHHHHHHTT
T ss_pred ccCCCCeEEEeCc---cHHHHHHHHHHhCcccccccccc-ccc-------ccC---------CCe--ecHHHHHHHHHCC
Confidence 3456789999999 69999999999999989887762 111 011 111 3899999999999
Q ss_pred CCeEe
Q psy4405 82 PPVEI 86 (91)
Q Consensus 82 ~~~~~ 86 (91)
++|+|
T Consensus 199 k~~IL 203 (308)
T 3kfv_A 199 KHALL 203 (308)
T ss_dssp CEEEE
T ss_pred CcEEE
Confidence 99987
No 219
>1in4_A RUVB, holliday junction DNA helicase RUVB; AAA+-class ATPase, winged-helix domain, ATP hydrolysis, walker A, walker B, sensor 1, sensor 2; HET: ADP; 1.60A {Thermotoga maritima} SCOP: a.4.5.11 c.37.1.20 PDB: 1in5_A* 1in6_A* 1in8_A* 1in7_A* 1j7k_A*
Probab=98.25 E-value=6e-07 Score=60.32 Aligned_cols=25 Identities=24% Similarity=0.398 Sum_probs=22.8
Q ss_pred cEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 7 KTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 7 ~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
+.++|+||||+|||||++.|++.+.
T Consensus 52 ~~~ll~Gp~G~GKTTLa~~ia~~l~ 76 (334)
T 1in4_A 52 DHVLLAGPPGLGKTTLAHIIASELQ 76 (334)
T ss_dssp CCEEEESSTTSSHHHHHHHHHHHHT
T ss_pred CeEEEECCCCCcHHHHHHHHHHHhC
Confidence 6789999999999999999998873
No 220
>3a4m_A L-seryl-tRNA(SEC) kinase; P-loop motif, walker A motif, ATP binding motif, ATP- binding, nucleotide-binding, transferase; HET: ADP; 1.79A {Methanocaldococcus jannaschii} PDB: 3a4l_A* 3a4n_A 3am1_A* 3add_A* 3adc_A* 3adb_A*
Probab=98.25 E-value=7.9e-07 Score=57.86 Aligned_cols=24 Identities=33% Similarity=0.456 Sum_probs=22.4
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhh
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINS 29 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~ 29 (91)
+.+|+|+|++||||||+++.|...
T Consensus 4 ~~lIvl~G~pGSGKSTla~~La~~ 27 (260)
T 3a4m_A 4 IMLIILTGLPGVGKSTFSKNLAKI 27 (260)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHH
T ss_pred CEEEEEEcCCCCCHHHHHHHHHHH
Confidence 678999999999999999999986
No 221
>2z0h_A DTMP kinase, thymidylate kinase; ATP-binding, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics, NPPSFA; HET: ADP TYD; 2.10A {Thermotoga maritima} PDB: 3hjn_A*
Probab=98.25 E-value=5.4e-07 Score=55.56 Aligned_cols=23 Identities=26% Similarity=0.277 Sum_probs=21.5
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
+|+|.|++||||||++++|.+.+
T Consensus 2 ~I~l~G~~GsGKsT~~~~L~~~l 24 (197)
T 2z0h_A 2 FITFEGIDGSGKSTQIQLLAQYL 24 (197)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHH
Confidence 68999999999999999999876
No 222
>1ixz_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 2.20A {Thermus thermophilus} SCOP: c.37.1.20 PDB: 1iy0_A* 1iy1_A*
Probab=98.25 E-value=6.7e-07 Score=57.56 Aligned_cols=23 Identities=30% Similarity=0.496 Sum_probs=21.5
Q ss_pred EEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 9 IALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 9 i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
++|+||||+|||||+++|++...
T Consensus 52 ~ll~G~~G~GKTtl~~~i~~~~~ 74 (254)
T 1ixz_A 52 VLLVGPPGVGKTHLARAVAGEAR 74 (254)
T ss_dssp EEEECCTTSSHHHHHHHHHHHTT
T ss_pred EEEECCCCCCHHHHHHHHHHHhC
Confidence 89999999999999999998875
No 223
>1w1w_A Structural maintenance of chromosome 1; cohesin, chromosome segregation, cell adhesion, kleisin, MIT cell cycle; HET: ATG; 2.90A {Saccharomyces cerevisiae} SCOP: c.37.1.12
Probab=98.25 E-value=8e-07 Score=61.55 Aligned_cols=27 Identities=11% Similarity=0.226 Sum_probs=24.3
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
.+++++|+||||||||||+++|.....
T Consensus 25 ~~~~~~i~G~nG~GKstll~ai~~~~~ 51 (430)
T 1w1w_A 25 ESNFTSIIGPNGSGKSNMMDAISFVLG 51 (430)
T ss_dssp TCSEEEEECSTTSSHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCCCCHHHHHHHHHhhhc
Confidence 368999999999999999999998774
No 224
>1e6c_A Shikimate kinase; phosphoryl transfer, ADP, shikimate pathway, P-loop protein, transferase; 1.8A {Erwinia chrysanthemi} SCOP: c.37.1.2 PDB: 1shk_A 2shk_A*
Probab=98.25 E-value=4.8e-07 Score=54.79 Aligned_cols=25 Identities=28% Similarity=0.429 Sum_probs=22.3
Q ss_pred cEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 7 KTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 7 ~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
++|+|.|++||||||+++.|...+.
T Consensus 3 ~~I~l~G~~GsGKsT~a~~La~~lg 27 (173)
T 1e6c_A 3 EPIFMVGARGCGMTTVGRELARALG 27 (173)
T ss_dssp CCEEEESCTTSSHHHHHHHHHHHHT
T ss_pred ceEEEECCCCCCHHHHHHHHHHHhC
Confidence 4799999999999999999998753
No 225
>1qhl_A Protein (cell division protein MUKB); SMC, chromosome partitioning; 2.20A {Escherichia coli} SCOP: c.37.1.12
Probab=98.24 E-value=3.8e-08 Score=63.58 Aligned_cols=26 Identities=23% Similarity=0.312 Sum_probs=22.6
Q ss_pred cEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 7 KTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 7 ~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
.+++|+||||||||||+++|+..+++
T Consensus 28 ~~~~i~GpnGsGKSTll~~i~g~~~~ 53 (227)
T 1qhl_A 28 LVTTLSGGNGAGKSTTMAAFVTALIP 53 (227)
T ss_dssp HHHHHHSCCSHHHHHHHHHHHHHHSC
T ss_pred cEEEEECCCCCCHHHHHHHHhccccc
Confidence 35678999999999999999998753
No 226
>1mky_A Probable GTP-binding protein ENGA; GTPase, DER, KH-domain, tandem G-domains, ligand binding protein; HET: GDP; 1.90A {Thermotoga maritima} SCOP: c.37.1.8 c.37.1.8 d.52.5.1
Probab=98.23 E-value=9.2e-07 Score=61.47 Aligned_cols=25 Identities=32% Similarity=0.515 Sum_probs=22.1
Q ss_pred cEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 7 KTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 7 ~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
..++|+|++|||||||+++|++...
T Consensus 181 ~kvaivG~~gvGKSTLln~l~g~~~ 205 (439)
T 1mky_A 181 IKVAIVGRPNVGKSTLFNAILNKER 205 (439)
T ss_dssp EEEEEECSTTSSHHHHHHHHHTSTT
T ss_pred ceEEEECCCCCCHHHHHHHHhCCcc
Confidence 3689999999999999999998753
No 227
>3qkt_A DNA double-strand break repair RAD50 ATPase; RECA-like fold, coiled-coils, ATP binding, DNA bindi MRE11, replication; HET: DNA ANP; 1.90A {Pyrococcus furiosus} PDB: 3qku_A* 1ii8_A 3qks_B* 3qkr_B* 1ii8_B
Probab=98.21 E-value=1e-06 Score=59.35 Aligned_cols=24 Identities=21% Similarity=0.408 Sum_probs=20.6
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHh
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLIN 28 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~ 28 (91)
...+.+|+||||||||||+.+|.-
T Consensus 22 ~~~~~~i~G~NGsGKS~lleAi~~ 45 (339)
T 3qkt_A 22 KEGINLIIGQNGSGKSSLLDAILV 45 (339)
T ss_dssp CSEEEEEECCTTSSHHHHHHHHHH
T ss_pred CCCeEEEECCCCCCHHHHHHHHHH
Confidence 345899999999999999998743
No 228
>2www_A Methylmalonic aciduria type A protein, mitochondrial; transport protein, nucleotide-binding; HET: GDP 2PE; 2.64A {Homo sapiens}
Probab=98.21 E-value=9.9e-07 Score=59.88 Aligned_cols=25 Identities=20% Similarity=0.216 Sum_probs=22.6
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
+.+++|+|++|||||||+++|++.+
T Consensus 74 ~~~v~lvG~pgaGKSTLln~L~~~~ 98 (349)
T 2www_A 74 AFRVGLSGPPGAGKSTFIEYFGKML 98 (349)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHHH
T ss_pred ceEEEEEcCCCCCHHHHHHHHHHHh
Confidence 6689999999999999999999753
No 229
>2qnr_A Septin-2, protein NEDD5; structural genomics consortium, SGC, mitosis, GDP, C cycle, cell division, GTP-binding, nucleotide-binding; HET: GDP; 2.60A {Homo sapiens} PDB: 2qa5_A* 3ftq_A*
Probab=98.21 E-value=5.6e-07 Score=59.95 Aligned_cols=21 Identities=33% Similarity=0.572 Sum_probs=18.7
Q ss_pred EEEEcCCCCCHHHHHHHHHhh
Q psy4405 9 IALVGCQGVGRRTLKARLINS 29 (91)
Q Consensus 9 i~l~GpsGaGKsTl~~~L~~~ 29 (91)
++|+||||||||||+++|.+.
T Consensus 21 I~lvG~nG~GKSTLl~~L~g~ 41 (301)
T 2qnr_A 21 LMVVGESGLGKSTLINSLFLT 41 (301)
T ss_dssp EEEEEETTSSHHHHHHHHHC-
T ss_pred EEEECCCCCCHHHHHHHHhCC
Confidence 589999999999999998875
No 230
>3lv8_A DTMP kinase, thymidylate kinase; structural genomics, in diseases, center for structural genomics of infectious DISE ATP-binding; HET: ADP TMP TYD; 1.80A {Vibrio cholerae o1 biovar eltor} PDB: 3n2i_A*
Probab=98.20 E-value=4.7e-07 Score=58.70 Aligned_cols=41 Identities=20% Similarity=0.178 Sum_probs=30.9
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCcCccccccccCCCCc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPEKFAAVIPYTTRPMR 46 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~~~~~~v~~~tr~~~ 46 (91)
+|.+|+|.|++||||||+++.|.+.+.. .+..+...+|.|.
T Consensus 26 ~~~~i~~eG~~GsGKsT~~~~l~~~l~~-~~~~~~~~~rep~ 66 (236)
T 3lv8_A 26 NAKFIVIEGLEGAGKSTAIQVVVETLQQ-NGIDHITRTREPG 66 (236)
T ss_dssp CCCEEEEEESTTSCHHHHHHHHHHHHHH-TTCCCEEEEESSC
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHHh-cCCCeeeeecCCC
Confidence 5789999999999999999999988742 2333234566654
No 231
>3thx_B DNA mismatch repair protein MSH3; ABC family ATPase, mismatch recognition, mismatched unpaired DNA binding protein-DNA complex; HET: DNA ADP; 2.70A {Homo sapiens} PDB: 3thw_B* 3thy_B* 3thz_B*
Probab=98.20 E-value=5.4e-07 Score=67.90 Aligned_cols=24 Identities=8% Similarity=0.178 Sum_probs=21.9
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHh
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLIN 28 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~ 28 (91)
+|++++|+|||||||||+++++..
T Consensus 672 ~g~i~~ItGPNGaGKSTlLr~i~~ 695 (918)
T 3thx_B 672 SERVMIITGPNMGGKSSYIKQVAL 695 (918)
T ss_dssp SCCEEEEESCCCHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCchHHHHHHHHH
Confidence 589999999999999999998764
No 232
>1iy2_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 3.20A {Thermus thermophilus} SCOP: c.37.1.20
Probab=98.20 E-value=9.6e-07 Score=57.69 Aligned_cols=23 Identities=30% Similarity=0.496 Sum_probs=21.6
Q ss_pred EEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 9 IALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 9 i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
++|+||||+|||||+++|++...
T Consensus 76 vll~Gp~GtGKTtl~~~i~~~~~ 98 (278)
T 1iy2_A 76 VLLVGPPGVGKTHLARAVAGEAR 98 (278)
T ss_dssp EEEECCTTSSHHHHHHHHHHHTT
T ss_pred EEEECCCcChHHHHHHHHHHHcC
Confidence 89999999999999999998875
No 233
>2wjg_A FEOB, ferrous iron transport protein B homolog; membrane G-proteins, cell membrane, ION transport, transmembrane; HET: GDP; 2.20A {Methanocaldococcus jannaschii}
Probab=98.20 E-value=1.3e-06 Score=53.23 Aligned_cols=26 Identities=38% Similarity=0.523 Sum_probs=22.2
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
+...++|+|++|+|||||+++|.+..
T Consensus 6 ~~~~i~lvG~~gvGKStL~~~l~~~~ 31 (188)
T 2wjg_A 6 KSYEIALIGNPNVGKSTIFNALTGEN 31 (188)
T ss_dssp CEEEEEEECSTTSSHHHHHHHHHTTC
T ss_pred CCCEEEEECCCCCCHHHHHHHHhCCC
Confidence 34568999999999999999998753
No 234
>3sr0_A Adenylate kinase; phosphoryl transfer analogue, ALF4, transferase (phosphotran phosphoryl transfer, nucleotide-binding; HET: ADP AMP; 1.56A {Aquifex aeolicus} PDB: 2rh5_A 2rgx_A*
Probab=98.20 E-value=8e-07 Score=56.44 Aligned_cols=24 Identities=25% Similarity=0.454 Sum_probs=21.9
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
+|+|+||+||||+|.++.|++.+.
T Consensus 2 ~Iil~GpPGsGKgTqa~~La~~~g 25 (206)
T 3sr0_A 2 ILVFLGPPGAGKGTQAKRLAKEKG 25 (206)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHC
Confidence 578999999999999999998874
No 235
>2pbr_A DTMP kinase, thymidylate kinase; transferase, nucleotide biosynthesis, TMP-binding, A binding, structural genomics, NPPSFA; 1.96A {Aquifex aeolicus}
Probab=98.20 E-value=8.4e-07 Score=54.44 Aligned_cols=23 Identities=30% Similarity=0.413 Sum_probs=21.3
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
+|+|.|++||||||+++.|.+.+
T Consensus 2 ~I~l~G~~GsGKsT~~~~L~~~l 24 (195)
T 2pbr_A 2 LIAFEGIDGSGKTTQAKKLYEYL 24 (195)
T ss_dssp EEEEECSTTSCHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHH
Confidence 68999999999999999999865
No 236
>2qag_C Septin-7; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens}
Probab=98.20 E-value=7.7e-07 Score=61.96 Aligned_cols=23 Identities=30% Similarity=0.521 Sum_probs=21.0
Q ss_pred EEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 9 IALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 9 i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
++|+||||||||||+++|++...
T Consensus 34 I~lvG~sGaGKSTLln~L~g~~~ 56 (418)
T 2qag_C 34 LMVVGESGLGKSTLINSLFLTDL 56 (418)
T ss_dssp EEEECCTTSSHHHHHHHHTTCCC
T ss_pred EEEECCCCCcHHHHHHHHhCCCC
Confidence 69999999999999999998763
No 237
>1ni3_A YCHF GTPase, YCHF GTP-binding protein; structural genomics, GTP1OBG, PSI, protein structure initiative; 2.80A {Schizosaccharomyces pombe} SCOP: c.37.1.8 d.15.10.2
Probab=98.19 E-value=9.9e-07 Score=60.99 Aligned_cols=26 Identities=23% Similarity=0.342 Sum_probs=23.2
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
+|..++|+|+||||||||+++|++..
T Consensus 19 ~g~~vgiVG~pnaGKSTL~n~Ltg~~ 44 (392)
T 1ni3_A 19 NNLKTGIVGMPNVGKSTFFRAITKSV 44 (392)
T ss_dssp SCCEEEEEECSSSSHHHHHHHHHHST
T ss_pred CCCEEEEECCCCCCHHHHHHHHHCCC
Confidence 46789999999999999999999843
No 238
>3qks_A DNA double-strand break repair RAD50 ATPase; RECA-like fold, coiled-coils, ATPase, exonuclease, endonucle binding, DNA binding; HET: DNA; 2.10A {Pyrococcus furiosus} PDB: 3qkr_A*
Probab=98.19 E-value=1.4e-06 Score=55.01 Aligned_cols=25 Identities=16% Similarity=0.315 Sum_probs=21.2
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
..+.+|+|||||||||++.+|.-.+
T Consensus 23 ~~~~~I~G~NgsGKStil~ai~~~l 47 (203)
T 3qks_A 23 EGINLIIGQNGSGKSSLLDAILVGL 47 (203)
T ss_dssp SEEEEEECCTTSSHHHHHHHHHHHH
T ss_pred CCeEEEEcCCCCCHHHHHHHHHHHh
Confidence 4589999999999999999886433
No 239
>2wji_A Ferrous iron transport protein B homolog; membrane G-proteins, cell membrane, ION transport, transmembrane; HET: GNP; 1.90A {Methanocaldococcus jannaschii} PDB: 2wjj_A* 2wjh_A*
Probab=98.19 E-value=1.1e-06 Score=52.95 Aligned_cols=24 Identities=38% Similarity=0.524 Sum_probs=21.2
Q ss_pred cEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 7 KTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 7 ~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
..++|+|++|+|||||+++|.+..
T Consensus 4 ~~v~lvG~~gvGKStL~~~l~~~~ 27 (165)
T 2wji_A 4 YEIALIGNPNVGKSTIFNALTGEN 27 (165)
T ss_dssp EEEEEECSTTSSHHHHHHHHHCCS
T ss_pred cEEEEECCCCCCHHHHHHHHhCCC
Confidence 468999999999999999998754
No 240
>3szr_A Interferon-induced GTP-binding protein MX1; interferon-induced antiviral GTPase, membrane associated, PR binding; 3.50A {Homo sapiens} PDB: 3zys_B
Probab=98.19 E-value=5.6e-07 Score=65.10 Aligned_cols=24 Identities=25% Similarity=0.387 Sum_probs=22.2
Q ss_pred cEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 7 KTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 7 ~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
..++|+||||||||||+++|++.+
T Consensus 46 p~iaIvG~nGsGKSTLL~~I~Gl~ 69 (608)
T 3szr_A 46 PAIAVIGDQSSGKSSVLEALSGVA 69 (608)
T ss_dssp CCEECCCCTTSCHHHHHHHHHSCC
T ss_pred CeEEEECCCCChHHHHHHHHhCCC
Confidence 359999999999999999999987
No 241
>1xjc_A MOBB protein homolog; structural genomics, midwest center for structural GEN PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} SCOP: c.37.1.10
Probab=98.18 E-value=9.9e-07 Score=54.65 Aligned_cols=25 Identities=20% Similarity=0.364 Sum_probs=22.5
Q ss_pred cEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 7 KTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 7 ~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
++++|+|++|||||||+..|...+.
T Consensus 5 ~~i~i~G~sGsGKTTl~~~L~~~l~ 29 (169)
T 1xjc_A 5 NVWQVVGYKHSGKTTLMEKWVAAAV 29 (169)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHHhhH
Confidence 5899999999999999999998763
No 242
>2gj8_A MNME, tRNA modification GTPase TRME; G-domain dimer, alpha-beta-sandwich, hydrolase; HET: GDP; 1.70A {Escherichia coli BL21} SCOP: c.37.1.8 PDB: 2gj9_A* 2gja_A* 1rfl_A
Probab=98.18 E-value=1.2e-06 Score=53.28 Aligned_cols=26 Identities=15% Similarity=0.322 Sum_probs=22.6
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
++..++|+|++|+|||||+++|.+..
T Consensus 3 ~~~ki~ivG~~g~GKStLl~~l~~~~ 28 (172)
T 2gj8_A 3 HGMKVVIAGRPNAGKSSLLNALAGRE 28 (172)
T ss_dssp -CEEEEEEESTTSSHHHHHHHHHTSC
T ss_pred CCCEEEEECCCCCCHHHHHHHHhCCC
Confidence 46679999999999999999998764
No 243
>3thx_A DNA mismatch repair protein MSH2; ABC family ATPase, mismatch recognition, mismatched unpaired DNA binding protein-DNA complex; HET: DNA ADP; 2.70A {Homo sapiens} PDB: 2o8c_A* 2o8d_A* 2o8f_A* 3thw_A* 2o8b_A* 3thy_A* 3thz_A* 2o8e_A*
Probab=98.18 E-value=1e-06 Score=66.59 Aligned_cols=22 Identities=18% Similarity=0.114 Sum_probs=20.9
Q ss_pred CCcEEEEEcCCCCCHHHHHHHH
Q psy4405 5 KRKTIALVGCQGVGRRTLKARL 26 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L 26 (91)
+|++++|+|||||||||+++++
T Consensus 661 ~g~i~~ItGpNGsGKSTlLr~i 682 (934)
T 3thx_A 661 KQMFHIITGPNMGGKSTYIRQT 682 (934)
T ss_dssp TBCEEEEECCTTSSHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHH
Confidence 5899999999999999999998
No 244
>2o8b_B DNA mismatch repair protein MSH6; DNA damage response, somatic hypermutat protein-DNA complex, DNA mispair, cancer; HET: DNA ADP; 2.75A {Homo sapiens} PDB: 2o8c_B* 2o8d_B* 2o8e_B* 2o8f_B*
Probab=98.16 E-value=1.2e-06 Score=66.59 Aligned_cols=24 Identities=17% Similarity=0.101 Sum_probs=22.1
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
|++++|+|||||||||+++.| +..
T Consensus 789 g~i~~ItGpNgsGKSTlLr~i-Gl~ 812 (1022)
T 2o8b_B 789 AYCVLVTGPNMGGKSTLMRQA-GLL 812 (1022)
T ss_dssp CCEEEEECCTTSSHHHHHHHH-HHH
T ss_pred CcEEEEECCCCCChHHHHHHH-HHH
Confidence 799999999999999999988 654
No 245
>2qmh_A HPR kinase/phosphorylase; V267F mutation, ATP-binding, carbohydrate metabolism, magnesium, metal-binding, multifunctional enzyme; 2.60A {Lactobacillus casei} PDB: 1jb1_A 1kkl_A 1kkm_A*
Probab=98.16 E-value=1.7e-06 Score=55.16 Aligned_cols=27 Identities=19% Similarity=0.315 Sum_probs=24.2
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
.|+.++|+||+|+|||||+..|++...
T Consensus 33 ~g~~ilI~GpsGsGKStLA~~La~~g~ 59 (205)
T 2qmh_A 33 YGLGVLITGDSGVGKSETALELVQRGH 59 (205)
T ss_dssp TTEEEEEECCCTTTTHHHHHHHHTTTC
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHhCC
Confidence 578899999999999999999998764
No 246
>2pt5_A Shikimate kinase, SK; aromatic amino acid biosynthesis, P-loop kinase, SHI kinase, shikimate pathway; 2.10A {Aquifex aeolicus}
Probab=98.15 E-value=1.2e-06 Score=52.86 Aligned_cols=24 Identities=29% Similarity=0.314 Sum_probs=21.5
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
.|+|.|++||||||+++.|...+.
T Consensus 2 ~I~l~G~~GsGKsT~a~~L~~~l~ 25 (168)
T 2pt5_A 2 RIYLIGFMCSGKSTVGSLLSRSLN 25 (168)
T ss_dssp EEEEESCTTSCHHHHHHHHHHHHT
T ss_pred eEEEECCCCCCHHHHHHHHHHHhC
Confidence 589999999999999999998653
No 247
>3be4_A Adenylate kinase; malaria, cryptosporidium parvum nonprotein inhibitors, nucleotide-binding, transferase; HET: AP5; 1.60A {Cryptosporidium parvum iowa II}
Probab=98.15 E-value=1.1e-06 Score=55.65 Aligned_cols=27 Identities=22% Similarity=0.378 Sum_probs=23.5
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
++..|+|+|++||||||+++.|+..+.
T Consensus 4 ~~~~I~l~G~~GsGKsT~a~~La~~l~ 30 (217)
T 3be4_A 4 KKHNLILIGAPGSGKGTQCEFIKKEYG 30 (217)
T ss_dssp GCCEEEEEECTTSSHHHHHHHHHHHHC
T ss_pred CceEEEEECCCCCCHHHHHHHHHHHhC
Confidence 356799999999999999999998763
No 248
>2dr3_A UPF0273 protein PH0284; RECA superfamily ATPase, hexamer, structural genomics; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=98.15 E-value=1.6e-06 Score=55.06 Aligned_cols=25 Identities=20% Similarity=0.489 Sum_probs=21.6
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhh
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINS 29 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~ 29 (91)
+|++++|+||||+|||||+..++..
T Consensus 22 ~G~~~~i~G~~GsGKTtl~~~~~~~ 46 (247)
T 2dr3_A 22 ERNVVLLSGGPGTGKTIFSQQFLWN 46 (247)
T ss_dssp TTCEEEEEECTTSSHHHHHHHHHHH
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHH
Confidence 5899999999999999997766543
No 249
>1ak2_A Adenylate kinase isoenzyme-2; nucleoside monophosphate kinase, phosphotransferase; 1.92A {Bos taurus} SCOP: c.37.1.1 g.41.2.1 PDB: 2ak2_A 2c9y_A*
Probab=98.15 E-value=1.5e-06 Score=55.48 Aligned_cols=27 Identities=26% Similarity=0.321 Sum_probs=23.5
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
.+..|+|+|+.||||||+++.|+..+.
T Consensus 15 ~~~~I~l~G~~GsGKsT~a~~La~~l~ 41 (233)
T 1ak2_A 15 KGVRAVLLGPPGAGKGTQAPKLAKNFC 41 (233)
T ss_dssp CCCEEEEECCTTSSHHHHHHHHHHHHT
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHhC
Confidence 346799999999999999999998764
No 250
>2o5v_A DNA replication and repair protein RECF; ABC ATPase, walker A motif, P-loop, signature motif, replication/recombination complex; HET: DNA; 1.61A {Deinococcus radiodurans}
Probab=98.13 E-value=1.5e-06 Score=59.42 Aligned_cols=24 Identities=17% Similarity=0.278 Sum_probs=21.3
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhh
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINS 29 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~ 29 (91)
+| +++|+||||+|||||+++|...
T Consensus 26 ~g-~~~i~G~nG~GKttll~ai~~~ 49 (359)
T 2o5v_A 26 EG-VTGIYGENGAGKTNLLEAAYLA 49 (359)
T ss_dssp SE-EEEEECCTTSSHHHHHHHHHHH
T ss_pred CC-eEEEECCCCCChhHHHHHHHHh
Confidence 35 9999999999999999999764
No 251
>2zej_A Dardarin, leucine-rich repeat kinase 2; parkinson'S disease, LRRK2, ROC, GTPase, ROCO, ATP-B disease mutation, GTP-binding, GTPase activation; HET: GDP; 2.00A {Homo sapiens} PDB: 3d6t_B*
Probab=98.12 E-value=1.4e-06 Score=53.38 Aligned_cols=22 Identities=32% Similarity=0.643 Sum_probs=20.1
Q ss_pred EEEEEcCCCCCHHHHHHHHHhh
Q psy4405 8 TIALVGCQGVGRRTLKARLINS 29 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~ 29 (91)
-++|+|++|+|||||+++|.+.
T Consensus 4 kv~ivG~~gvGKStLl~~l~~~ 25 (184)
T 2zej_A 4 KLMIVGNTGSGKTTLLQQLMKT 25 (184)
T ss_dssp EEEEESCTTSSHHHHHHHHTCC
T ss_pred EEEEECCCCCCHHHHHHHHhcC
Confidence 4789999999999999999875
No 252
>2xb4_A Adenylate kinase; ATP-binding, nucleotide-binding, transferase; HET: SRT; 1.80A {Desulfovibrio gigas} PDB: 3l0s_A* 3l0p_A*
Probab=98.12 E-value=1.4e-06 Score=55.35 Aligned_cols=24 Identities=21% Similarity=0.315 Sum_probs=21.5
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
.|+|.|++||||||+++.|...+.
T Consensus 2 ~I~l~G~~GsGKsT~a~~La~~lg 25 (223)
T 2xb4_A 2 NILIFGPNGSGKGTQGNLVKDKYS 25 (223)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHHHhC
Confidence 589999999999999999988763
No 253
>1zuh_A Shikimate kinase; alpha-beta protein, transferase; 1.80A {Helicobacter pylori} PDB: 1zui_A* 3hr7_A 3muf_A* 3mrs_A 3n2e_A*
Probab=98.12 E-value=1.6e-06 Score=52.50 Aligned_cols=25 Identities=24% Similarity=0.401 Sum_probs=22.1
Q ss_pred cEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 7 KTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 7 ~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
..++|.|+.||||||+++.|...+.
T Consensus 8 ~~i~l~G~~GsGKSTva~~La~~lg 32 (168)
T 1zuh_A 8 QHLVLIGFMGSGKSSLAQELGLALK 32 (168)
T ss_dssp CEEEEESCTTSSHHHHHHHHHHHHT
T ss_pred ceEEEECCCCCCHHHHHHHHHHHhC
Confidence 3789999999999999999998653
No 254
>3lxx_A GTPase IMAP family member 4; structural genomics consortium, SGC, coiled coil, GTP- binding, nucleotide-binding, immune system; HET: GDP; 2.15A {Homo sapiens}
Probab=98.11 E-value=3.7e-06 Score=53.64 Aligned_cols=25 Identities=24% Similarity=0.419 Sum_probs=22.0
Q ss_pred cEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 7 KTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 7 ~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
.-++|+|++|+|||||+++|++...
T Consensus 30 ~~i~lvG~~g~GKStlin~l~g~~~ 54 (239)
T 3lxx_A 30 LRIVLVGKTGAGKSATGNSILGRKV 54 (239)
T ss_dssp EEEEEECCTTSSHHHHHHHHHTSCC
T ss_pred eEEEEECCCCCCHHHHHHHHcCCCc
Confidence 3589999999999999999998664
No 255
>1svi_A GTP-binding protein YSXC; ENGB, GTPase, GDP, hydrolase; HET: GDP; 1.95A {Bacillus subtilis} SCOP: c.37.1.8 PDB: 1sul_A* 1svw_A*
Probab=98.11 E-value=2.6e-06 Score=52.16 Aligned_cols=29 Identities=34% Similarity=0.461 Sum_probs=23.3
Q ss_pred CCCCCcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 2 PPLKRKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 2 ~~~~g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
|..+..-++|+|++|+|||||++.|.+..
T Consensus 19 ~~~~~~~i~v~G~~~~GKSsli~~l~~~~ 47 (195)
T 1svi_A 19 PEGGLPEIALAGRSNVGKSSFINSLINRK 47 (195)
T ss_dssp CCSCCCEEEEEEBTTSSHHHHHHHHHTC-
T ss_pred CCCCCCEEEEECCCCCCHHHHHHHHhCCC
Confidence 44345578999999999999999998753
No 256
>1e69_A Chromosome segregation SMC protein; structural maintenance of chromosomes, coiled coil; 3.1A {Thermotoga maritima} SCOP: c.37.1.12
Probab=98.10 E-value=1.5e-06 Score=58.15 Aligned_cols=23 Identities=22% Similarity=0.294 Sum_probs=21.0
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
+.+|+||||||||||+++|.-.+
T Consensus 26 ~~~i~G~NGsGKS~ll~ai~~ll 48 (322)
T 1e69_A 26 VTAIVGPNGSGKSNIIDAIKWVF 48 (322)
T ss_dssp EEEEECCTTTCSTHHHHHHHHTS
T ss_pred cEEEECCCCCcHHHHHHHHHHHh
Confidence 99999999999999999998544
No 257
>1tf7_A KAIC; homohexamer, hexamer, circadian clock protein; HET: ATP; 2.80A {Synechococcus SP} SCOP: c.37.1.11 c.37.1.11 PDB: 3s1a_A* 1u9i_A* 2gbl_A* 3dvl_A* 3k0a_A* 3k09_A* 3jzm_A* 3k0e_A* 4dug_A* 3ua2_A* 3k0c_A* 3k0f_A*
Probab=98.10 E-value=2e-06 Score=61.00 Aligned_cols=27 Identities=26% Similarity=0.459 Sum_probs=24.8
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
+|++++|+||||+|||||++.|+...+
T Consensus 280 ~G~i~~i~G~~GsGKSTLl~~l~g~~~ 306 (525)
T 1tf7_A 280 KDSIILATGATGTGKTLLVSRFVENAC 306 (525)
T ss_dssp SSCEEEEEECTTSSHHHHHHHHHHHHH
T ss_pred CCcEEEEEeCCCCCHHHHHHHHHHHHH
Confidence 589999999999999999999998764
No 258
>1zu4_A FTSY; GTPase, signal recognition particle, SRP, receptor, protein transport; 1.95A {Mycoplasma mycoides} PDB: 1zu5_A
Probab=98.09 E-value=1.8e-06 Score=58.08 Aligned_cols=27 Identities=30% Similarity=0.465 Sum_probs=24.7
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
++++++|+||+|+||||++..|+..+.
T Consensus 104 ~~~vI~ivG~~G~GKTT~~~~LA~~l~ 130 (320)
T 1zu4_A 104 RLNIFMLVGVNGTGKTTSLAKMANYYA 130 (320)
T ss_dssp SCEEEEEESSTTSSHHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHH
Confidence 578999999999999999999998774
No 259
>2f6r_A COA synthase, bifunctional coenzyme A synthase; 18044849, bifunctional coenzyme A synthase (COA synthase), S genomics; HET: ACO UNL; 1.70A {Mus musculus}
Probab=98.09 E-value=2.6e-06 Score=56.14 Aligned_cols=24 Identities=29% Similarity=0.493 Sum_probs=21.3
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHh
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLIN 28 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~ 28 (91)
...+|+|.|++||||||+++.|..
T Consensus 74 ~~~iI~I~G~~GSGKSTva~~La~ 97 (281)
T 2f6r_A 74 GLYVLGLTGISGSGKSSVAQRLKN 97 (281)
T ss_dssp TCEEEEEEECTTSCHHHHHHHHHH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHH
Confidence 345899999999999999999984
No 260
>1e4v_A Adenylate kinase; transferase(phosphotransferase); HET: AP5; 1.85A {Escherichia coli} SCOP: c.37.1.1 g.41.2.1 PDB: 1e4y_A* 1ake_A* 1ank_A* 2eck_A* 3hpq_A* 4ake_A 3hpr_A*
Probab=98.09 E-value=1.7e-06 Score=54.47 Aligned_cols=24 Identities=21% Similarity=0.296 Sum_probs=21.3
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
.|+|+|++||||||+++.|...+.
T Consensus 2 ~I~l~G~~GsGKsT~a~~L~~~~g 25 (214)
T 1e4v_A 2 RIILLGAPVAGKGTQAQFIMEKYG 25 (214)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHHHhC
Confidence 478999999999999999998663
No 261
>3t5g_A GTP-binding protein RHEB; immunoglobulin-like beta sandwitch, PDE delta, RHEB; HET: GDP FAR; 1.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 1xtq_A* 1xtr_A* 1xts_A* 2l0x_A* 3sea_A*
Probab=98.09 E-value=1.7e-06 Score=52.44 Aligned_cols=29 Identities=31% Similarity=0.685 Sum_probs=23.4
Q ss_pred CCCCCCcEEEEEcCCCCCHHHHHHHHHhh
Q psy4405 1 MPPLKRKTIALVGCQGVGRRTLKARLINS 29 (91)
Q Consensus 1 m~~~~g~~i~l~GpsGaGKsTl~~~L~~~ 29 (91)
||..+..-++|+|++|+|||||++.|...
T Consensus 1 m~~~~~~ki~~~G~~~~GKSsli~~l~~~ 29 (181)
T 3t5g_A 1 MPQSKSRKIAILGYRSVGKSSLTIQFVEG 29 (181)
T ss_dssp -CCEEEEEEEEEESTTSSHHHHHHHHHHS
T ss_pred CCCCceEEEEEECcCCCCHHHHHHHHHcC
Confidence 66645556899999999999999999853
No 262
>4edh_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology; HET: TMP ADP; 1.32A {Pseudomonas aeruginosa PAO1} PDB: 4e5u_A* 4esh_A* 4gmd_A* 3uwk_A* 3uwo_A* 3uxm_A*
Probab=98.09 E-value=2.1e-06 Score=54.69 Aligned_cols=40 Identities=23% Similarity=0.196 Sum_probs=29.8
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCcCccccccccCCCCc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPEKFAAVIPYTTRPMR 46 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~~~~~~v~~~tr~~~ 46 (91)
+|.+|+|.|++||||||+++.|.+.+.. .+..+ ..+|.|.
T Consensus 5 ~g~~i~~eG~~gsGKsT~~~~l~~~l~~-~~~~v-~~~~~p~ 44 (213)
T 4edh_A 5 TGLFVTLEGPEGAGKSTNRDYLAERLRE-RGIEV-QLTREPG 44 (213)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHHHT-TTCCE-EEEESSC
T ss_pred CceEEEEEcCCCCCHHHHHHHHHHHHHH-cCCCc-ccccCCC
Confidence 4789999999999999999999887742 22333 3455553
No 263
>1wms_A RAB-9, RAB9, RAS-related protein RAB-9A; GTPase, protein transport; HET: GDP; 1.25A {Homo sapiens} SCOP: c.37.1.8 PDB: 1s8f_A* 1yzl_A* 2ocb_A*
Probab=98.08 E-value=2.6e-06 Score=51.24 Aligned_cols=30 Identities=27% Similarity=0.470 Sum_probs=22.9
Q ss_pred CCCCCCc-EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 1 MPPLKRK-TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 1 m~~~~g~-~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
|++.... -++|+|++|+|||||++.|....
T Consensus 1 m~~~~~~~~i~v~G~~~~GKSsli~~l~~~~ 31 (177)
T 1wms_A 1 MAGKSSLFKVILLGDGGVGKSSLMNRYVTNK 31 (177)
T ss_dssp -CCCEEEEEEEEECCTTSSHHHHHHHHHHSC
T ss_pred CCCccceeEEEEECCCCCCHHHHHHHHHcCC
Confidence 4554333 47899999999999999998654
No 264
>3lda_A DNA repair protein RAD51; DNA binding protein, ATP-binding, DNA damage, DNA recombinat repair, nucleotide-binding; HET: DNA; 2.50A {Saccharomyces cerevisiae} PDB: 1szp_A*
Probab=98.07 E-value=2.4e-06 Score=59.14 Aligned_cols=23 Identities=22% Similarity=0.213 Sum_probs=21.0
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHH
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLI 27 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~ 27 (91)
+|+++.|+||||||||||++.|+
T Consensus 177 ~Gei~~I~G~sGsGKTTLl~~la 199 (400)
T 3lda_A 177 TGSITELFGEFRTGKSQLCHTLA 199 (400)
T ss_dssp TTSEEEEEESTTSSHHHHHHHHH
T ss_pred CCcEEEEEcCCCCChHHHHHHHH
Confidence 58999999999999999999664
No 265
>2gf0_A GTP-binding protein DI-RAS1; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC, transport protein; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8
Probab=98.07 E-value=3.3e-06 Score=51.72 Aligned_cols=30 Identities=27% Similarity=0.610 Sum_probs=22.3
Q ss_pred CCCCCCc-EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 1 MPPLKRK-TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 1 m~~~~g~-~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
||..... -++|+|++|+|||||++.|....
T Consensus 2 m~~~~~~~ki~vvG~~~~GKSsli~~l~~~~ 32 (199)
T 2gf0_A 2 MPEQSNDYRVVVFGAGGVGKSSLVLRFVKGT 32 (199)
T ss_dssp ---CCCCEEEEEEECTTSSHHHHHHHHHHSC
T ss_pred CccCCCeeEEEEECCCCCcHHHHHHHHHcCC
Confidence 6655444 58999999999999999998743
No 266
>3m6a_A ATP-dependent protease LA 1; alpha, beta, ATP-binding, hydrolase, nucleotide-binding, Pro serine protease, stress response; HET: ADP; 3.40A {Bacillus subtilis} PDB: 1x37_A
Probab=98.07 E-value=2.7e-06 Score=60.76 Aligned_cols=28 Identities=29% Similarity=0.431 Sum_probs=25.1
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
+|+.++|+||||+|||||++.|++.+..
T Consensus 107 ~g~~vll~Gp~GtGKTtlar~ia~~l~~ 134 (543)
T 3m6a_A 107 KGPILCLAGPPGVGKTSLAKSIAKSLGR 134 (543)
T ss_dssp CSCEEEEESSSSSSHHHHHHHHHHHHTC
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHhcCC
Confidence 5789999999999999999999988743
No 267
>2grj_A Dephospho-COA kinase; TM1387, EC 2.7.1.24, dephosphocoenzyme kinase, structural genomics, joint center for structural GE JCSG; HET: ADP COD; 2.60A {Thermotoga maritima}
Probab=98.06 E-value=3.1e-06 Score=53.15 Aligned_cols=24 Identities=29% Similarity=0.362 Sum_probs=21.9
Q ss_pred cEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 7 KTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 7 ~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
.+|+|.|++||||||+++.|.+.+
T Consensus 13 ~iIgltG~~GSGKSTva~~L~~~l 36 (192)
T 2grj_A 13 MVIGVTGKIGTGKSTVCEILKNKY 36 (192)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHHhc
Confidence 479999999999999999999874
No 268
>3syl_A Protein CBBX; photosynthesis, rubisco activase, AAA+ protein, calvin cycle chaperone; 3.00A {Rhodobacter sphaeroides} PDB: 3syk_A 3zuh_A*
Probab=98.05 E-value=8e-06 Score=53.61 Aligned_cols=26 Identities=15% Similarity=0.327 Sum_probs=22.3
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
.+..+.|.||+|+|||++++.|+..+
T Consensus 66 ~~~~vll~G~~GtGKT~la~~la~~l 91 (309)
T 3syl_A 66 PTLHMSFTGNPGTGKTTVALKMAGLL 91 (309)
T ss_dssp CCCEEEEEECTTSSHHHHHHHHHHHH
T ss_pred CCceEEEECCCCCCHHHHHHHHHHHH
Confidence 34579999999999999999888765
No 269
>1ega_A Protein (GTP-binding protein ERA); GTPase, RNA-binding, RAS-like, hydrolase; 2.40A {Escherichia coli} SCOP: c.37.1.8 d.52.3.1 PDB: 1x1l_X 3ieu_A* 1x18_X
Probab=98.05 E-value=2.4e-06 Score=56.84 Aligned_cols=26 Identities=35% Similarity=0.477 Sum_probs=22.8
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
+...++|+|++|+|||||+++|.+..
T Consensus 7 r~~~VaIvG~~nvGKSTLln~L~g~~ 32 (301)
T 1ega_A 7 YCGFIAIVGRPNVGKSTLLNKLLGQK 32 (301)
T ss_dssp EEEEEEEECSSSSSHHHHHHHHHTCS
T ss_pred cCCEEEEECCCCCCHHHHHHHHHCCC
Confidence 44579999999999999999998764
No 270
>1ls1_A Signal recognition particle protein; FFH, SRP54, SRP, GTPase, ultrahigh resolution, protein transport; 1.10A {Thermus aquaticus} SCOP: a.24.13.1 c.37.1.10 PDB: 1jpn_B* 1jpj_A* 1ry1_U* 2j45_A* 1o87_A* 2c04_A* 2j46_A* 1rj9_B* 2c03_A* 2j7p_A* 1okk_A* 2cnw_A* 1ng1_A* 2xkv_A 3ng1_A 1ffh_A 2ng1_A*
Probab=98.05 E-value=2.5e-06 Score=56.69 Aligned_cols=27 Identities=37% Similarity=0.405 Sum_probs=24.7
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
++++++|+|++|+||||++..|+..+.
T Consensus 97 ~~~~i~i~g~~G~GKTT~~~~la~~~~ 123 (295)
T 1ls1_A 97 DRNLWFLVGLQGSGKTTTAAKLALYYK 123 (295)
T ss_dssp SSEEEEEECCTTTTHHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHH
Confidence 578999999999999999999998875
No 271
>3pqc_A Probable GTP-binding protein ENGB; rossmann fold, GTPase, cell cycle, hydrolase; HET: GDP; 1.90A {Thermotoga maritima} PDB: 3pr1_A
Probab=98.05 E-value=4.2e-06 Score=50.98 Aligned_cols=26 Identities=31% Similarity=0.510 Sum_probs=22.3
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
....++|+|++|+|||||+++|.+..
T Consensus 22 ~~~~i~v~G~~~~GKSsli~~l~~~~ 47 (195)
T 3pqc_A 22 LKGEVAFVGRSNVGKSSLLNALFNRK 47 (195)
T ss_dssp TTCEEEEEEBTTSSHHHHHHHHHTSC
T ss_pred CCeEEEEECCCCCCHHHHHHHHHcCc
Confidence 33468999999999999999998765
No 272
>2ocp_A DGK, deoxyguanosine kinase; protein-nucleotide complex, transferase; HET: DTP; 2.80A {Homo sapiens} SCOP: c.37.1.1
Probab=98.05 E-value=3.7e-06 Score=53.86 Aligned_cols=27 Identities=22% Similarity=0.412 Sum_probs=24.5
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
++.+|+|.|+.||||||+++.|.+.+.
T Consensus 1 ~~~~i~~~G~~g~GKtt~~~~l~~~l~ 27 (241)
T 2ocp_A 1 GPRRLSIEGNIAVGKSTFVKLLTKTYP 27 (241)
T ss_dssp CCEEEEEEECTTSSHHHHHHHHHHHCT
T ss_pred CCeEEEEEcCCCCCHHHHHHHHHHHcC
Confidence 367899999999999999999999874
No 273
>4dhe_A Probable GTP-binding protein ENGB; melioidosis, RAS-like GTPase, cell division, cell cycle, SEP GTP-binding; 2.20A {Burkholderia thailandensis}
Probab=98.04 E-value=3.4e-06 Score=52.80 Aligned_cols=29 Identities=31% Similarity=0.464 Sum_probs=23.7
Q ss_pred CCCCCcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 2 PPLKRKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 2 ~~~~g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
|......++|+|++|+|||||++.|.+..
T Consensus 25 ~~~~~~~i~v~G~~~~GKSslin~l~~~~ 53 (223)
T 4dhe_A 25 PPTVQPEIAFAGRSNAGKSTAINVLCNQK 53 (223)
T ss_dssp CCCCSCEEEEEESCHHHHHHHHHHHTTCS
T ss_pred CCCCCCEEEEEcCCCCCHHHHHHHHhCCC
Confidence 33344578999999999999999998764
No 274
>1lv7_A FTSH; alpha/beta domain, four helix bundle, hydrolase; 1.50A {Escherichia coli} SCOP: c.37.1.20
Probab=98.04 E-value=3.6e-06 Score=54.18 Aligned_cols=25 Identities=24% Similarity=0.430 Sum_probs=22.2
Q ss_pred cEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 7 KTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 7 ~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
+-+.|.||+|+|||||++.|++...
T Consensus 46 ~~vll~G~~GtGKT~la~~la~~~~ 70 (257)
T 1lv7_A 46 KGVLMVGPPGTGKTLLAKAIAGEAK 70 (257)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHT
T ss_pred CeEEEECcCCCCHHHHHHHHHHHcC
Confidence 4588999999999999999998764
No 275
>1udx_A The GTP-binding protein OBG; TGS domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.07A {Thermus thermophilus} SCOP: b.117.1.1 c.37.1.8 d.242.1.1
Probab=98.04 E-value=1.6e-06 Score=60.37 Aligned_cols=26 Identities=27% Similarity=0.530 Sum_probs=23.3
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
+..++|+|+||||||||+++|++..+
T Consensus 157 g~~VgLVG~~gAGKSTLL~~Lsg~~~ 182 (416)
T 1udx_A 157 IADVGLVGYPNAGKSSLLAAMTRAHP 182 (416)
T ss_dssp SCSEEEECCGGGCHHHHHHHHCSSCC
T ss_pred CCEEEEECCCCCcHHHHHHHHHcCCc
Confidence 56799999999999999999988754
No 276
>3bos_A Putative DNA replication factor; P-loop containing nucleoside triphosphate hydrolases, struct genomics; HET: MSE CDP; 1.75A {Shewanella amazonensis} PDB: 3sc3_A
Probab=98.03 E-value=4.1e-06 Score=52.62 Aligned_cols=26 Identities=23% Similarity=0.134 Sum_probs=23.1
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
.++.+.|.||+|+|||||++.|....
T Consensus 51 ~~~~~ll~G~~G~GKT~la~~l~~~~ 76 (242)
T 3bos_A 51 GVQAIYLWGPVKSGRTHLIHAACARA 76 (242)
T ss_dssp SCSEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHH
Confidence 46789999999999999999998765
No 277
>2p67_A LAO/AO transport system kinase; ARGK, structural GEN PSI-2, protein structure initiative, NEW YORK SGX research for structural genomics; 1.80A {Escherichia coli} SCOP: c.37.1.10
Probab=98.03 E-value=3.6e-06 Score=56.85 Aligned_cols=26 Identities=15% Similarity=0.221 Sum_probs=23.6
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
++.+++|+|++|+|||||++.|+..+
T Consensus 55 ~~~~i~i~G~~g~GKSTl~~~l~~~~ 80 (341)
T 2p67_A 55 NTLRLGVTGTPGAGKSTFLEAFGMLL 80 (341)
T ss_dssp CSEEEEEEECTTSCHHHHHHHHHHHH
T ss_pred CCEEEEEEcCCCCCHHHHHHHHHHHH
Confidence 57899999999999999999998765
No 278
>3tmk_A Thymidylate kinase; phosphotransferase; HET: T5A; 2.00A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 2tmk_A* 1tmk_A*
Probab=98.03 E-value=3.6e-06 Score=53.86 Aligned_cols=27 Identities=22% Similarity=0.222 Sum_probs=25.4
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
+|.+|+|.|++||||||+++.|.+.+.
T Consensus 4 ~g~~i~~eG~~g~GKst~~~~l~~~l~ 30 (216)
T 3tmk_A 4 RGKLILIEGLDRTGKTTQCNILYKKLQ 30 (216)
T ss_dssp CCCEEEEEECSSSSHHHHHHHHHHHHC
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHhc
Confidence 589999999999999999999999886
No 279
>3oes_A GTPase rhebl1; small GTPase, structural genomics, structural genomics conso SGC, hydrolase; HET: GNP; 2.30A {Homo sapiens}
Probab=98.03 E-value=3.3e-06 Score=52.29 Aligned_cols=30 Identities=20% Similarity=0.602 Sum_probs=22.4
Q ss_pred CCCCCCcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 1 MPPLKRKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 1 m~~~~g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
||..+.--++|+|++|+|||||+++|....
T Consensus 19 ~~~~~~~ki~vvG~~~~GKSsli~~l~~~~ 48 (201)
T 3oes_A 19 MPLVRYRKVVILGYRCVGKTSLAHQFVEGE 48 (201)
T ss_dssp ----CEEEEEEEESTTSSHHHHHHHHHHSC
T ss_pred CCCCCcEEEEEECCCCcCHHHHHHHHHhCC
Confidence 444344468999999999999999998765
No 280
>3cf0_A Transitional endoplasmic reticulum ATPase; AAA, P97/VCP, ERAD, CDC48, ATP-binding, lipid-binding, nucle binding, nucleus, phosphoprotein, transport; HET: ADP; 3.00A {Mus musculus}
Probab=98.02 E-value=4.4e-06 Score=55.28 Aligned_cols=27 Identities=22% Similarity=0.352 Sum_probs=24.2
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
.++.+.|.||+|+|||+|+++|+....
T Consensus 48 ~~~~vLL~Gp~GtGKT~la~ala~~~~ 74 (301)
T 3cf0_A 48 PSKGVLFYGPPGCGKTLLAKAIANECQ 74 (301)
T ss_dssp CCSEEEEECSSSSSHHHHHHHHHHHTT
T ss_pred CCceEEEECCCCcCHHHHHHHHHHHhC
Confidence 367899999999999999999998875
No 281
>4tmk_A Protein (thymidylate kinase); ATP:DTMP phosphotransferase, transferase; HET: T5A; 1.98A {Escherichia coli} SCOP: c.37.1.1 PDB: 5tmp_A*
Probab=98.02 E-value=3.2e-06 Score=53.91 Aligned_cols=40 Identities=20% Similarity=0.334 Sum_probs=29.8
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCcCccc-cccccCCCCc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPEKFAA-VIPYTTRPMR 46 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~~~~~-~v~~~tr~~~ 46 (91)
+|.+|+|.|++||||||+++.|...+.. .+. .+ ..||.|.
T Consensus 2 ~g~~i~~eG~~gsGKsT~~~~l~~~l~~-~~~~~v-~~~rep~ 42 (213)
T 4tmk_A 2 RSKYIVIEGLEGAGKTTARNVVVETLEQ-LGIRDM-VFTREPG 42 (213)
T ss_dssp CCCEEEEEECTTSCHHHHHHHHHHHHHH-TTCCCE-EEEESSC
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHHH-cCCCcc-eeeeCCC
Confidence 4789999999999999999999988742 222 22 4456553
No 282
>2h92_A Cytidylate kinase; rossmann fold, transferase; HET: C5P PG4; 2.30A {Staphylococcus aureus}
Probab=98.00 E-value=4.2e-06 Score=52.54 Aligned_cols=26 Identities=27% Similarity=0.347 Sum_probs=23.1
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
+.+++|+|++||||||+++.|.+.+.
T Consensus 3 ~~~i~i~G~~gsGkst~~~~l~~~~g 28 (219)
T 2h92_A 3 AINIALDGPAAAGKSTIAKRVASELS 28 (219)
T ss_dssp CCCEEEECCTTSSHHHHHHHHHHHTT
T ss_pred ceEEEEECCCCCCHHHHHHHHHHhcC
Confidence 35899999999999999999998764
No 283
>1jbk_A CLPB protein; beta barrel, chaperone; 1.80A {Escherichia coli} SCOP: c.37.1.20
Probab=97.99 E-value=5.8e-06 Score=49.90 Aligned_cols=25 Identities=24% Similarity=0.437 Sum_probs=22.1
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
+..+.|.||+|+|||+|++.+...+
T Consensus 43 ~~~~ll~G~~G~GKT~l~~~~~~~~ 67 (195)
T 1jbk_A 43 KNNPVLIGEPGVGKTAIVEGLAQRI 67 (195)
T ss_dssp SCEEEEECCTTSCHHHHHHHHHHHH
T ss_pred CCceEEECCCCCCHHHHHHHHHHHH
Confidence 4578999999999999999998875
No 284
>3k1j_A LON protease, ATP-dependent protease LON; ATP-binding, nucleotide-binding, Pro hydrolase; HET: ADP PE8; 2.00A {Thermococcus onnurineus}
Probab=97.99 E-value=4.3e-06 Score=60.24 Aligned_cols=28 Identities=21% Similarity=0.495 Sum_probs=25.2
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
.|+.++|+||||+|||||++.|++.++.
T Consensus 59 ~g~~vll~Gp~GtGKTtlar~ia~~l~~ 86 (604)
T 3k1j_A 59 QKRHVLLIGEPGTGKSMLGQAMAELLPT 86 (604)
T ss_dssp TTCCEEEECCTTSSHHHHHHHHHHTSCC
T ss_pred CCCEEEEEeCCCCCHHHHHHHHhccCCc
Confidence 4678999999999999999999998863
No 285
>1p5z_B DCK, deoxycytidine kinase; nucleoside kinase, P-loop, ARAC, cytarabine, transferase; HET: AR3 ADP; 1.60A {Homo sapiens} SCOP: c.37.1.1 PDB: 1p60_A* 1p61_B* 1p62_B* 2a7q_A* 2qrn_A* 2qro_A* 3exk_A* 3hp1_A* 2no7_A* 2no1_A* 2no6_A* 2no0_A* 2no9_A* 2noa_A* 2zi5_A* 2zi4_A* 2zi6_A* 2zi7_B* 2zia_A* 3kfx_A* ...
Probab=97.99 E-value=2.8e-06 Score=55.09 Aligned_cols=27 Identities=22% Similarity=0.255 Sum_probs=24.4
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
++.+|+|.|+.||||||+++.|.+.+.
T Consensus 23 ~~~~I~ieG~~GsGKST~~~~L~~~l~ 49 (263)
T 1p5z_B 23 RIKKISIEGNIAAGKSTFVNILKQLCE 49 (263)
T ss_dssp CCEEEEEECSTTSSHHHHHTTTGGGCT
T ss_pred CceEEEEECCCCCCHHHHHHHHHHhcC
Confidence 567899999999999999999998874
No 286
>3b1v_A Ferrous iron uptake transporter protein B; G protein, iron transport, GTPase, transmembrane, potassium; HET: GGM; 1.85A {Streptococcus thermophilus} PDB: 3b1w_A* 3lx5_A* 3lx8_A* 3ss8_A* 3b1z_A 3b1y_A* 3b1x_A* 3tah_A*
Probab=97.98 E-value=1.1e-05 Score=53.14 Aligned_cols=24 Identities=29% Similarity=0.452 Sum_probs=21.4
Q ss_pred cEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 7 KTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 7 ~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
..++|+|++|+|||||+++|++..
T Consensus 4 ~kI~lvG~~nvGKSTL~n~L~g~~ 27 (272)
T 3b1v_A 4 TEIALIGNPNSGKTSLFNLITGHN 27 (272)
T ss_dssp EEEEEECCTTSSHHHHHHHHHCCC
T ss_pred eEEEEECCCCCCHHHHHHHHHCCC
Confidence 358999999999999999999754
No 287
>2fn4_A P23, RAS-related protein R-RAS; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GDP; 1.65A {Homo sapiens} SCOP: c.37.1.8 PDB: 2ery_A*
Probab=97.98 E-value=6e-06 Score=49.63 Aligned_cols=24 Identities=33% Similarity=0.617 Sum_probs=21.0
Q ss_pred cEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 7 KTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 7 ~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
.-++|+|++|+|||||+++|.+..
T Consensus 10 ~~i~v~G~~~~GKssli~~l~~~~ 33 (181)
T 2fn4_A 10 HKLVVVGGGGVGKSALTIQFIQSY 33 (181)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHSS
T ss_pred eEEEEECCCCCCHHHHHHHHHhCc
Confidence 358999999999999999998763
No 288
>3b9p_A CG5977-PA, isoform A; AAA ATPase, ATP-binding, nucleotide-binding, hydrolase; 2.70A {Drosophila melanogaster}
Probab=97.96 E-value=6.6e-06 Score=53.84 Aligned_cols=26 Identities=23% Similarity=0.327 Sum_probs=23.7
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
++.+.|.||+|+||||+++.|+....
T Consensus 54 ~~~vll~Gp~GtGKT~la~~la~~~~ 79 (297)
T 3b9p_A 54 AKGLLLFGPPGNGKTLLARAVATECS 79 (297)
T ss_dssp CSEEEEESSSSSCHHHHHHHHHHHTT
T ss_pred CCeEEEECcCCCCHHHHHHHHHHHhC
Confidence 56899999999999999999998875
No 289
>2w58_A DNAI, primosome component (helicase loader); ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.50A {Geobacillus kaustophilus HTA426}
Probab=97.95 E-value=7.1e-06 Score=50.92 Aligned_cols=24 Identities=38% Similarity=0.455 Sum_probs=21.9
Q ss_pred cEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 7 KTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 7 ~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
+.+.|.||+|+|||+|++.|....
T Consensus 55 ~~~~l~G~~GtGKT~la~~i~~~~ 78 (202)
T 2w58_A 55 KGLYLHGSFGVGKTYLLAAIANEL 78 (202)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CeEEEECCCCCCHHHHHHHHHHHH
Confidence 689999999999999999998765
No 290
>1sxj_C Activator 1 40 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=97.95 E-value=5.4e-06 Score=55.53 Aligned_cols=22 Identities=18% Similarity=0.304 Sum_probs=20.7
Q ss_pred EEEEcCCCCCHHHHHHHHHhhC
Q psy4405 9 IALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 9 i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
+.|.||+|+||||+++.|++.+
T Consensus 49 ~ll~Gp~G~GKTtla~~la~~l 70 (340)
T 1sxj_C 49 LLFYGPPGTGKTSTIVALAREI 70 (340)
T ss_dssp EEEECSSSSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHH
Confidence 8999999999999999999875
No 291
>3clv_A RAB5 protein, putative; malaria, GTPase, structural genomics, GTP-binding, nucleotide-binding, signaling protein; HET: GDP; 1.89A {Plasmodium falciparum}
Probab=97.95 E-value=1.1e-05 Score=49.21 Aligned_cols=24 Identities=25% Similarity=0.436 Sum_probs=21.2
Q ss_pred cEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 7 KTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 7 ~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
--++|+|++|+|||||+++|.+..
T Consensus 8 ~ki~v~G~~~~GKSsli~~l~~~~ 31 (208)
T 3clv_A 8 YKTVLLGESSVGKSSIVLRLTKDT 31 (208)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHSC
T ss_pred eEEEEECCCCCCHHHHHHHHHhCc
Confidence 358999999999999999998764
No 292
>4fcw_A Chaperone protein CLPB; AAA domain; HET: ADP; 2.35A {Thermus thermophilus} PDB: 4fcv_A* 4fd2_A* 4fct_A*
Probab=97.95 E-value=8.4e-06 Score=53.46 Aligned_cols=24 Identities=25% Similarity=0.430 Sum_probs=22.0
Q ss_pred cEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 7 KTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 7 ~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
..+.|.||+|+|||++++.|...+
T Consensus 48 ~~~ll~G~~GtGKt~la~~la~~~ 71 (311)
T 4fcw_A 48 GSFLFLGPTGVGKTELAKTLAATL 71 (311)
T ss_dssp EEEEEESCSSSSHHHHHHHHHHHH
T ss_pred eEEEEECCCCcCHHHHHHHHHHHH
Confidence 478999999999999999999876
No 293
>1z2a_A RAS-related protein RAB-23; RAB GTPase, vesicular trafficking, protein transport; HET: GDP; 1.90A {Mus musculus} SCOP: c.37.1.8 PDB: 1z22_A*
Probab=97.94 E-value=6.2e-06 Score=48.98 Aligned_cols=23 Identities=22% Similarity=0.417 Sum_probs=20.4
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-++|+|++|+|||||++.|.+..
T Consensus 7 ~i~v~G~~~~GKssl~~~l~~~~ 29 (168)
T 1z2a_A 7 KMVVVGNGAVGKSSMIQRYCKGI 29 (168)
T ss_dssp EEEEECSTTSSHHHHHHHHHHCC
T ss_pred EEEEECcCCCCHHHHHHHHHcCC
Confidence 47899999999999999998754
No 294
>2dyk_A GTP-binding protein; GTPase, ribosome-binding protein, structural genomics; HET: GDP; 1.96A {Thermus thermophilus}
Probab=97.94 E-value=6.8e-06 Score=48.56 Aligned_cols=23 Identities=30% Similarity=0.598 Sum_probs=20.7
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-++|+|++|+|||||+++|.+..
T Consensus 3 ki~v~G~~~~GKSsli~~l~~~~ 25 (161)
T 2dyk_A 3 KVVIVGRPNVGKSSLFNRLLKKR 25 (161)
T ss_dssp EEEEECCTTSSHHHHHHHHHHCC
T ss_pred EEEEECCCCCCHHHHHHHHhCCC
Confidence 47899999999999999998765
No 295
>1kao_A RAP2A; GTP-binding protein, small G protein, GDP, RAS; HET: GDP; 1.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 2rap_A* 3rap_R*
Probab=97.94 E-value=6.8e-06 Score=48.59 Aligned_cols=23 Identities=22% Similarity=0.645 Sum_probs=20.4
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-++|+|++|+|||||++.|....
T Consensus 5 ~i~v~G~~~~GKSsli~~l~~~~ 27 (167)
T 1kao_A 5 KVVVLGSGGVGKSALTVQFVTGT 27 (167)
T ss_dssp EEEEECCTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHcCC
Confidence 48899999999999999998654
No 296
>2nzj_A GTP-binding protein REM 1; GDP/GTP binding, GTP hydrolysis, RAD and GEM like GTP protein 1, structural genomics; HET: GDP; 2.50A {Homo sapiens}
Probab=97.93 E-value=6.5e-06 Score=49.29 Aligned_cols=23 Identities=26% Similarity=0.544 Sum_probs=20.1
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-++|+|++|+|||||+++|.+..
T Consensus 6 ki~i~G~~~vGKSsl~~~l~~~~ 28 (175)
T 2nzj_A 6 RVVLLGDPGVGKTSLASLFAGKQ 28 (175)
T ss_dssp EEEEECCTTSSHHHHHHHHHCC-
T ss_pred EEEEECCCCccHHHHHHHHhcCC
Confidence 48899999999999999998654
No 297
>2ged_A SR-beta, signal recognition particle receptor beta subunit; protein transport, G protein, proline isomerization, circular permutation; 2.20A {Saccharomyces cerevisiae}
Probab=97.93 E-value=9.8e-06 Score=49.52 Aligned_cols=24 Identities=25% Similarity=0.401 Sum_probs=21.5
Q ss_pred cEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 7 KTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 7 ~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
..++|+|++|+|||||+++|.+..
T Consensus 49 ~~i~vvG~~g~GKSsll~~l~~~~ 72 (193)
T 2ged_A 49 PSIIIAGPQNSGKTSLLTLLTTDS 72 (193)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHSS
T ss_pred CEEEEECCCCCCHHHHHHHHhcCC
Confidence 368999999999999999998765
No 298
>2ygr_A Uvrabc system protein A; hydrolase, nucleotide excision repair; 3.40A {Mycobacterium tuberculosis} PDB: 3zqj_A
Probab=97.92 E-value=3.3e-06 Score=64.06 Aligned_cols=23 Identities=22% Similarity=0.400 Sum_probs=20.9
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHH
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLI 27 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~ 27 (91)
.|++++|+|+||||||||++.|+
T Consensus 667 ~GeivaI~G~nGSGKSTLl~~il 689 (993)
T 2ygr_A 667 LGVLTSVTGVSGSGKSTLVNDIL 689 (993)
T ss_dssp SSSEEEEECSTTSSHHHHHTTTH
T ss_pred CCCEEEEEcCCCCCHHHHHHHHH
Confidence 58999999999999999999853
No 299
>3auy_A DNA double-strand break repair RAD50 ATPase; DNA repair, ABC transporter ATPase domain-like; HET: DNA ADP; 2.70A {Methanocaldococcus jannaschii} PDB: 3aux_A* 3av0_B*
Probab=97.92 E-value=7.7e-06 Score=55.70 Aligned_cols=24 Identities=17% Similarity=0.455 Sum_probs=20.9
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHh
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLIN 28 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~ 28 (91)
...+.+|+||||||||||+.+|.=
T Consensus 24 ~~gl~vi~G~NGaGKT~ileAI~~ 47 (371)
T 3auy_A 24 EKGIVAIIGENGSGKSSIFEAVFF 47 (371)
T ss_dssp CSEEEEEEECTTSSHHHHHHHHHH
T ss_pred CCCeEEEECCCCCCHHHHHHHHHH
Confidence 345899999999999999999863
No 300
>3k53_A Ferrous iron transport protein B; GTPase fold, helical bundle, G-protein, prokaryote, GTP-BIND nucleotide-binding, metal transport; 2.70A {Pyrococcus furiosus}
Probab=97.92 E-value=6.1e-06 Score=53.78 Aligned_cols=24 Identities=42% Similarity=0.545 Sum_probs=21.6
Q ss_pred cEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 7 KTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 7 ~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
..++|+|++|||||||+++|++..
T Consensus 4 ~~i~lvG~~g~GKTTL~n~l~g~~ 27 (271)
T 3k53_A 4 KTVALVGNPNVGKTTIFNALTGLR 27 (271)
T ss_dssp EEEEEEECSSSSHHHHHHHHHTTC
T ss_pred eEEEEECCCCCCHHHHHHHHhCCC
Confidence 468999999999999999998765
No 301
>2atv_A RERG, RAS-like estrogen-regulated growth inhibitor; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8
Probab=97.92 E-value=9.4e-06 Score=49.92 Aligned_cols=25 Identities=28% Similarity=0.582 Sum_probs=21.5
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
.--++|+|++|+|||||+++|....
T Consensus 28 ~~ki~v~G~~~vGKSsli~~l~~~~ 52 (196)
T 2atv_A 28 EVKLAIFGRAGVGKSALVVRFLTKR 52 (196)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHSC
T ss_pred ceEEEEECCCCCCHHHHHHHHHhCC
Confidence 3458999999999999999998753
No 302
>2ce2_X GTPase HRAS; signaling protein, guanine nucleotide binding protein, fluor membrane, lipoprotein, palmitate, prenylation; HET: GDP XY2; 1.0A {Homo sapiens} PDB: 2cl0_X* 2cl6_X* 2cl7_X* 2clc_X* 2evw_X* 2cld_X* 1aa9_A* 1ioz_A* 1q21_A* 6q21_A* 3k9l_A* 3k9n_A* 1ctq_A* 1bkd_R 1crp_A* 1crq_A* 1crr_A* 121p_A* 1gnp_A* 1gnq_A* ...
Probab=97.91 E-value=7e-06 Score=48.41 Aligned_cols=23 Identities=35% Similarity=0.719 Sum_probs=20.4
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-++++|++|+|||||++.|.+..
T Consensus 5 ~i~v~G~~~~GKssl~~~l~~~~ 27 (166)
T 2ce2_X 5 KLVVVGAGGVGKSALTIQLIQNH 27 (166)
T ss_dssp EEEEEESTTSSHHHHHHHHHHSS
T ss_pred EEEEECCCCCCHHHHHHHHHhCc
Confidence 47899999999999999998654
No 303
>2lkc_A Translation initiation factor IF-2; NMR {Geobacillus stearothermophilus} PDB: 2lkd_A*
Probab=97.91 E-value=1e-05 Score=48.60 Aligned_cols=26 Identities=19% Similarity=0.365 Sum_probs=22.2
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
+...++|+|++|+|||||+++|....
T Consensus 7 ~~~~i~v~G~~~~GKssl~~~l~~~~ 32 (178)
T 2lkc_A 7 RPPVVTIMGHVDHGKTTLLDAIRHSK 32 (178)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHTTC
T ss_pred CCCEEEEECCCCCCHHHHHHHHhCCc
Confidence 34578999999999999999998754
No 304
>1wf3_A GTP-binding protein; GTPase, riken structural genomics/prote initiative, RSGI, structural genomics, hydrolase; HET: GNP; 1.88A {Thermus thermophilus} SCOP: c.37.1.8 d.52.3.1
Probab=97.91 E-value=1.4e-05 Score=53.27 Aligned_cols=30 Identities=30% Similarity=0.401 Sum_probs=22.7
Q ss_pred CCCC-CCcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 1 MPPL-KRKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 1 m~~~-~g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
||.. +...++|+|.+|+|||||+++|.+..
T Consensus 1 m~~~~~~g~V~ivG~~nvGKSTLln~l~g~~ 31 (301)
T 1wf3_A 1 MAEKTYSGFVAIVGKPNVGKSTLLNNLLGVK 31 (301)
T ss_dssp --CCCEEEEEEEECSTTSSHHHHHHHHHTSC
T ss_pred CCCCccCCEEEEECCCCCCHHHHHHHHhCCc
Confidence 5553 22368999999999999999998754
No 305
>3kl4_A SRP54, signal recognition 54 kDa protein; signal recognition particle, SRP, SRP54, FFH, signal sequenc peptide; 3.50A {Sulfolobus solfataricus} PDB: 1qzx_A 1qzw_A
Probab=97.91 E-value=5.4e-06 Score=58.03 Aligned_cols=27 Identities=33% Similarity=0.357 Sum_probs=23.8
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
++++++++||+||||||++..|+..+.
T Consensus 96 ~~~vI~lvG~~GsGKTTt~~kLA~~l~ 122 (433)
T 3kl4_A 96 LPFIIMLVGVQGSGKTTTAGKLAYFYK 122 (433)
T ss_dssp SSEEEEECCCTTSCHHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHH
Confidence 478999999999999999999987663
No 306
>2qu8_A Putative nucleolar GTP-binding protein 1; GTPase, malaria, structural genomics, structural genomics consortium, SGC, unknown function; HET: GDP; 2.01A {Plasmodium falciparum}
Probab=97.91 E-value=1e-05 Score=51.08 Aligned_cols=26 Identities=31% Similarity=0.509 Sum_probs=22.0
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
+..-++|+|++|+|||||+++|.+..
T Consensus 28 ~~~kI~vvG~~~vGKSsLin~l~~~~ 53 (228)
T 2qu8_A 28 HKKTIILSGAPNVGKSSFMNIVSRAN 53 (228)
T ss_dssp TSEEEEEECSTTSSHHHHHHHHTTTC
T ss_pred CCCEEEEECCCCCCHHHHHHHHhCCC
Confidence 34568999999999999999998653
No 307
>1ky3_A GTP-binding protein YPT7P; vesicular traffic, GTP hydrolysis, YPT/RAB protein, endocytosis, hydrolase, endocytosis/exocytosis complex; HET: GDP; 1.35A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 1ky2_A*
Probab=97.90 E-value=8.2e-06 Score=49.05 Aligned_cols=23 Identities=30% Similarity=0.665 Sum_probs=20.5
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-++|+|++|+|||||++.|....
T Consensus 10 ~i~v~G~~~~GKSsli~~l~~~~ 32 (182)
T 1ky3_A 10 KVIILGDSGVGKTSLMHRYVNDK 32 (182)
T ss_dssp EEEEECCTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHhCc
Confidence 47899999999999999998754
No 308
>2erx_A GTP-binding protein DI-RAS2; GTP hydrolysis, transport protein; HET: GDP; 1.65A {Homo sapiens} SCOP: c.37.1.8
Probab=97.90 E-value=8.4e-06 Score=48.49 Aligned_cols=23 Identities=30% Similarity=0.674 Sum_probs=20.3
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-++|+|++|+|||||++.|.+..
T Consensus 5 ~i~v~G~~~~GKssli~~l~~~~ 27 (172)
T 2erx_A 5 RVAVFGAGGVGKSSLVLRFVKGT 27 (172)
T ss_dssp EEEEECCTTSSHHHHHHHHHTCC
T ss_pred EEEEECCCCCCHHHHHHHHHcCC
Confidence 47899999999999999998643
No 309
>1u8z_A RAS-related protein RAL-A; GNP, GTP, GMPPNP, GPPNHP, GDP, GTPase, signaling protein; HET: GDP; 1.50A {Saguinus oedipus} SCOP: c.37.1.8 PDB: 1u8y_A* 1u90_A* 1uad_A* 1zc3_A* 1zc4_A* 2kwi_A* 2ke5_A*
Probab=97.90 E-value=8.5e-06 Score=48.21 Aligned_cols=23 Identities=26% Similarity=0.622 Sum_probs=20.4
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-++|+|++|+|||||++.|....
T Consensus 6 ~i~v~G~~~~GKssl~~~l~~~~ 28 (168)
T 1u8z_A 6 KVIMVGSGGVGKSALTLQFMYDE 28 (168)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHhCc
Confidence 57899999999999999998654
No 310
>2ga8_A Hypothetical 39.9 kDa protein; YFR007W, YFH7, unknown function; HET: CME; 1.77A {Saccharomyces cerevisiae} PDB: 2gaa_A*
Probab=97.90 E-value=6e-06 Score=56.58 Aligned_cols=24 Identities=29% Similarity=0.470 Sum_probs=21.6
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
.++|+||+|+||||++++|++.+.
T Consensus 26 ~i~l~G~~G~GKTTl~~~la~~l~ 49 (359)
T 2ga8_A 26 CVILVGSPGSGKSTIAEELCQIIN 49 (359)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHH
T ss_pred EEEEECCCCCcHHHHHHHHHHHhC
Confidence 389999999999999999998764
No 311
>3hr8_A Protein RECA; alpha and beta proteins (A/B, A+B), ATP-binding, cytoplasm, damage, DNA recombination, DNA repair, DNA-binding; 1.95A {Thermotoga maritima}
Probab=97.89 E-value=8.5e-06 Score=55.69 Aligned_cols=26 Identities=19% Similarity=0.413 Sum_probs=23.7
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
+|+++.|+||+|+|||||+..|+...
T Consensus 60 ~G~i~~I~GppGsGKSTLal~la~~~ 85 (356)
T 3hr8_A 60 RGRIVEIFGQESSGKTTLALHAIAEA 85 (356)
T ss_dssp TTEEEEEEESTTSSHHHHHHHHHHHH
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHHH
Confidence 58999999999999999999998765
No 312
>1z0j_A RAB-22, RAS-related protein RAB-22A; RAB GTPase, RAB22 GTPase, rabenosyn, endosomal trafficking; HET: GTP; 1.32A {Mus musculus} SCOP: c.37.1.8 PDB: 1yvd_A*
Probab=97.89 E-value=8.9e-06 Score=48.39 Aligned_cols=23 Identities=26% Similarity=0.629 Sum_probs=20.7
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-++|+|++|+|||||++.|.+..
T Consensus 8 ~i~v~G~~~~GKSsli~~l~~~~ 30 (170)
T 1z0j_A 8 KVCLLGDTGVGKSSIMWRFVEDS 30 (170)
T ss_dssp EEEEECCTTSSHHHHHHHHHHSC
T ss_pred EEEEECcCCCCHHHHHHHHHcCC
Confidence 47899999999999999998765
No 313
>1ek0_A Protein (GTP-binding protein YPT51); vesicular traffic, GTP hydrolysis, YPT/RAB protein, endocytosis, hydrolase; HET: MHO GNP GDP; 1.48A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=97.89 E-value=8.7e-06 Score=48.35 Aligned_cols=23 Identities=22% Similarity=0.586 Sum_probs=20.3
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-++|+|++|+|||||+++|....
T Consensus 5 ~i~v~G~~~~GKssli~~l~~~~ 27 (170)
T 1ek0_A 5 KLVLLGEAAVGKSSIVLRFVSND 27 (170)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHhcCC
Confidence 47899999999999999998654
No 314
>2p65_A Hypothetical protein PF08_0063; CLPB, malaria, structural genomics, structural genomics consortium, SGC, unknown function; 1.70A {Plasmodium falciparum}
Probab=97.89 E-value=7.5e-06 Score=49.43 Aligned_cols=25 Identities=24% Similarity=0.363 Sum_probs=22.0
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
...+.|.||+|+|||+|++.+...+
T Consensus 43 ~~~vll~G~~G~GKT~la~~~~~~~ 67 (187)
T 2p65_A 43 KNNPILLGDPGVGKTAIVEGLAIKI 67 (187)
T ss_dssp SCEEEEESCGGGCHHHHHHHHHHHH
T ss_pred CCceEEECCCCCCHHHHHHHHHHHH
Confidence 4578899999999999999998765
No 315
>1z08_A RAS-related protein RAB-21; RAB GTPase, vesicular trafficking, protein transport; HET: GNP; 1.80A {Homo sapiens} SCOP: c.37.1.8 PDB: 2ot3_B 1yzu_A* 1z0i_A 1yzt_A*
Probab=97.89 E-value=8.9e-06 Score=48.45 Aligned_cols=23 Identities=26% Similarity=0.450 Sum_probs=20.4
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-++|+|++|+|||||++.|....
T Consensus 8 ~i~v~G~~~~GKssli~~l~~~~ 30 (170)
T 1z08_A 8 KVVLLGEGCVGKTSLVLRYCENK 30 (170)
T ss_dssp EEEEECCTTSCHHHHHHHHHHCC
T ss_pred EEEEECcCCCCHHHHHHHHHcCC
Confidence 47899999999999999998654
No 316
>3tqf_A HPR(Ser) kinase; transferase, hydrolase; 2.80A {Coxiella burnetii}
Probab=97.89 E-value=1e-05 Score=50.59 Aligned_cols=25 Identities=20% Similarity=0.449 Sum_probs=22.4
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhh
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINS 29 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~ 29 (91)
.|+-+.|.|+||+||||++..|...
T Consensus 15 ~G~gvli~G~SGaGKStlal~L~~r 39 (181)
T 3tqf_A 15 DKMGVLITGEANIGKSELSLALIDR 39 (181)
T ss_dssp TTEEEEEEESSSSSHHHHHHHHHHT
T ss_pred CCEEEEEEcCCCCCHHHHHHHHHHc
Confidence 5778999999999999999998874
No 317
>3bwd_D RAC-like GTP-binding protein ARAC6; G domain, cytoplasm, lipoprotein, membrane, methylation, nucleotide-binding, prenylation, ----; HET: GDP; 1.53A {Arabidopsis thaliana} PDB: 2nty_C* 2wbl_C
Probab=97.89 E-value=1.1e-05 Score=48.55 Aligned_cols=29 Identities=17% Similarity=0.171 Sum_probs=21.8
Q ss_pred CCCCCcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 2 PPLKRKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 2 ~~~~g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
+..+.--++|+|++|+|||||+++|....
T Consensus 4 ~~~~~~ki~v~G~~~~GKssl~~~~~~~~ 32 (182)
T 3bwd_D 4 SASRFIKCVTVGDGAVGKTCLLISYTSNT 32 (182)
T ss_dssp ---CCCEEEEECSTTSSHHHHHHHHHHSC
T ss_pred CCCceEEEEEECCCCCCHHHHHHHHhcCC
Confidence 33334468899999999999999998654
No 318
>1c1y_A RAS-related protein RAP-1A; GTP-binding proteins, protein-protein complex, effectors, signaling protein; HET: GTP; 1.90A {Homo sapiens} SCOP: c.37.1.8 PDB: 3kuc_A* 1gua_A* 3cf6_R* 3brw_D*
Probab=97.89 E-value=9e-06 Score=48.22 Aligned_cols=23 Identities=22% Similarity=0.596 Sum_probs=20.3
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-++|+|++|+|||||+++|....
T Consensus 5 ki~v~G~~~~GKssli~~l~~~~ 27 (167)
T 1c1y_A 5 KLVVLGSGGVGKSALTVQFVQGI 27 (167)
T ss_dssp EEEEECSTTSSHHHHHHHHHHCC
T ss_pred EEEEECCCCCCHHHHHHHHHcCC
Confidence 47899999999999999998753
No 319
>3h4m_A Proteasome-activating nucleotidase; ATPase, PAN, ATP-binding, nucleotide-binding, HY; HET: ADP; 3.11A {Methanocaldococcus jannaschii}
Probab=97.89 E-value=1.1e-05 Score=52.43 Aligned_cols=28 Identities=25% Similarity=0.334 Sum_probs=24.3
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
.++.+.|.||+|+|||+|++.|+..+..
T Consensus 50 ~~~~~ll~G~~GtGKT~la~~la~~~~~ 77 (285)
T 3h4m_A 50 PPKGILLYGPPGTGKTLLAKAVATETNA 77 (285)
T ss_dssp CCSEEEEESSSSSSHHHHHHHHHHHTTC
T ss_pred CCCeEEEECCCCCcHHHHHHHHHHHhCC
Confidence 3567999999999999999999988753
No 320
>1x6v_B Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthethase 1; transferase, ATP sulfurylase, APS kinase, PAPS; HET: ADP; 1.75A {Homo sapiens} SCOP: b.122.1.3 c.26.1.5 c.37.1.4 PDB: 1xjq_B* 1xnj_B* 2qjf_A* 2ofx_A* 2ofw_A*
Probab=97.88 E-value=8.3e-06 Score=59.41 Aligned_cols=27 Identities=26% Similarity=0.352 Sum_probs=24.4
Q ss_pred CCCcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 4 LKRKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 4 ~~g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
.++.+|+|.|++||||||+++.|.+.+
T Consensus 50 ~~g~lIvLtGlsGSGKSTlAr~La~~L 76 (630)
T 1x6v_B 50 FRGCTVWLTGLSGAGKTTVSMALEEYL 76 (630)
T ss_dssp CCCEEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CCCCEEEEEeCCCCCHHHHHHHHHHHH
Confidence 367899999999999999999998876
No 321
>3lxw_A GTPase IMAP family member 1; immunity, structural genomics consortium, SGC, immune system; HET: GDP; 2.21A {Homo sapiens} PDB: 3v70_A*
Probab=97.88 E-value=1.3e-05 Score=51.67 Aligned_cols=24 Identities=21% Similarity=0.455 Sum_probs=21.4
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
-++|+|.+|+|||||++.|++...
T Consensus 23 ~I~lvG~~g~GKSSlin~l~~~~~ 46 (247)
T 3lxw_A 23 RLILVGRTGAGKSATGNSILGQRR 46 (247)
T ss_dssp EEEEESSTTSSHHHHHHHHHTSCC
T ss_pred EEEEECCCCCcHHHHHHHHhCCCC
Confidence 589999999999999999987653
No 322
>1g16_A RAS-related protein SEC4; G protein RAB, signaling protein, endocytosis/exocytosis complex; HET: GDP; 1.80A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 1g17_A* 2ocy_C 2eqb_A
Probab=97.88 E-value=8.5e-06 Score=48.48 Aligned_cols=23 Identities=35% Similarity=0.670 Sum_probs=20.3
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-++|+|++|+|||||++.|.+..
T Consensus 5 ~i~v~G~~~~GKssli~~l~~~~ 27 (170)
T 1g16_A 5 KILLIGDSGVGKSCLLVRFVEDK 27 (170)
T ss_dssp EEEEEESTTSSHHHHHHHHHHCC
T ss_pred EEEEECcCCCCHHHHHHHHHhCC
Confidence 47899999999999999998654
No 323
>3q85_A GTP-binding protein REM 2; G-domain, CAV2 beta, signaling protein; HET: GNP; 1.76A {Mus musculus} SCOP: c.37.1.8 PDB: 4aii_A*
Probab=97.88 E-value=8.6e-06 Score=48.57 Aligned_cols=23 Identities=35% Similarity=0.518 Sum_probs=19.5
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-++|+|++|+|||||+++|.+..
T Consensus 4 ki~ivG~~~~GKSsli~~l~~~~ 26 (169)
T 3q85_A 4 KVMLVGESGVGKSTLAGTFGGLQ 26 (169)
T ss_dssp EEEEECSTTSSHHHHHHHHHCC-
T ss_pred EEEEECCCCCCHHHHHHHHHhcc
Confidence 37899999999999999997543
No 324
>2vf7_A UVRA2, excinuclease ABC, subunit A.; DNA-binding protein, nucleotide-binding, zinc-binding domain, SOS response, metal-binding; HET: ADP; 2.30A {Deinococcus radiodurans} PDB: 2vf8_A*
Probab=97.87 E-value=2.5e-06 Score=63.83 Aligned_cols=24 Identities=25% Similarity=0.488 Sum_probs=21.4
Q ss_pred CCcEEEEEcCCCCCHHHHHHH-HHh
Q psy4405 5 KRKTIALVGCQGVGRRTLKAR-LIN 28 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~-L~~ 28 (91)
.|++++|+|+||||||||++. |.+
T Consensus 522 ~Geiv~I~G~nGSGKSTLl~~~L~g 546 (842)
T 2vf7_A 522 LGVMTSVTGVSGSGKSTLVSQALVD 546 (842)
T ss_dssp SSSEEEEECCTTSSHHHHCCCCCHH
T ss_pred CCCEEEEEcCCCcCHHHHHHHHHHH
Confidence 589999999999999999996 554
No 325
>3q72_A GTP-binding protein RAD; G-domain, CAV2 beta, signaling protein; HET: GNP; 1.66A {Homo sapiens} SCOP: c.37.1.8 PDB: 3q7p_A* 3q7q_A* 2gjs_A* 2dpx_A*
Probab=97.87 E-value=6.3e-06 Score=49.02 Aligned_cols=23 Identities=26% Similarity=0.476 Sum_probs=19.6
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-++|+|++|+|||||+++|.+..
T Consensus 4 ki~~vG~~~~GKSsli~~l~~~~ 26 (166)
T 3q72_A 4 KVLLLGAPGVGKSALARIFGGVE 26 (166)
T ss_dssp EEEEEESTTSSHHHHHHHHCCC-
T ss_pred EEEEECCCCCCHHHHHHHHcCcc
Confidence 47899999999999999997544
No 326
>2r6f_A Excinuclease ABC subunit A; UVRA, nucleotide excision repair, DNA repair, ABC ATPase, at cassette, DNA damage, DNA excision; HET: ADP; 3.20A {Geobacillus stearothermophilus} PDB: 3uwx_A
Probab=97.87 E-value=3.1e-06 Score=64.08 Aligned_cols=23 Identities=26% Similarity=0.481 Sum_probs=21.0
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHH
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLI 27 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~ 27 (91)
.|++++|+|+||||||||++.|+
T Consensus 649 ~Geiv~I~G~nGSGKSTLl~~ll 671 (972)
T 2r6f_A 649 LGTFVAVTGVSGSGKSTLVNEVL 671 (972)
T ss_dssp SSSEEECCBCTTSSHHHHHTTTH
T ss_pred CCCEEEEEcCCCCCHHHHHHHHH
Confidence 58999999999999999999853
No 327
>1l8q_A Chromosomal replication initiator protein DNAA; AAA+, helix-turn-helix, nucleotide-binding, DNA binding, REP initiation, DNA binding protein; HET: ADP; 2.70A {Aquifex aeolicus} SCOP: a.4.12.2 c.37.1.20 PDB: 3r8f_A* 2hcb_A*
Probab=97.87 E-value=1e-05 Score=53.76 Aligned_cols=25 Identities=24% Similarity=0.297 Sum_probs=22.4
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
+..+.|.||+|+|||||++.|...+
T Consensus 37 ~~~lll~G~~GtGKT~la~~i~~~~ 61 (324)
T 1l8q_A 37 YNPIFIYGSVGTGKTHLLQAAGNEA 61 (324)
T ss_dssp CSSEEEECSSSSSHHHHHHHHHHHH
T ss_pred CCeEEEECCCCCcHHHHHHHHHHHH
Confidence 4679999999999999999998765
No 328
>2iwr_A Centaurin gamma 1; ANK repeat, zinc-finger, GTP-binding, polymorphism, nucleotide-binding, alternative splicing, protein transport; HET: CAF; 1.5A {Homo sapiens} PDB: 2bmj_A
Probab=97.86 E-value=9.9e-06 Score=48.82 Aligned_cols=30 Identities=17% Similarity=0.392 Sum_probs=23.2
Q ss_pred CCCCCCcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 1 MPPLKRKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 1 m~~~~g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
|...+.--++|+|++|+|||||+++|....
T Consensus 2 m~~~~~~ki~~vG~~~vGKTsli~~l~~~~ 31 (178)
T 2iwr_A 2 MRSIPELRLGVLGDARSGKSSLIHRFLTGS 31 (178)
T ss_dssp CCCCCEEEEEEECCGGGCHHHHHHHHHHSC
T ss_pred CCCCCceEEEEECCCCCCHHHHHHHHHhCC
Confidence 443333358999999999999999998754
No 329
>1r2q_A RAS-related protein RAB-5A; GTPase, GNP, atomic resolution, protein transport; HET: GNP; 1.05A {Homo sapiens} SCOP: c.37.1.8 PDB: 1n6h_A* 1tu4_A* 1tu3_A* 1n6k_A* 1n6i_A* 1n6l_A* 1n6o_A* 1n6p_A* 1n6n_A* 1n6r_A* 3mjh_A* 1z0d_A* 1huq_A* 2hei_A* 1z07_A*
Probab=97.86 E-value=1e-05 Score=47.98 Aligned_cols=23 Identities=26% Similarity=0.579 Sum_probs=20.2
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-++|+|++|+|||||+++|....
T Consensus 8 ~i~v~G~~~~GKssli~~l~~~~ 30 (170)
T 1r2q_A 8 KLVLLGESAVGKSSLVLRFVKGQ 30 (170)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHcCC
Confidence 47899999999999999998643
No 330
>1sxj_E Activator 1 40 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=97.86 E-value=7.1e-06 Score=54.80 Aligned_cols=21 Identities=33% Similarity=0.531 Sum_probs=19.8
Q ss_pred EEEEcCCCCCHHHHHHHHHhh
Q psy4405 9 IALVGCQGVGRRTLKARLINS 29 (91)
Q Consensus 9 i~l~GpsGaGKsTl~~~L~~~ 29 (91)
+.|.||+|+||||+++.|++.
T Consensus 39 ~ll~Gp~G~GKTtl~~~la~~ 59 (354)
T 1sxj_E 39 LLLYGPNGTGKKTRCMALLES 59 (354)
T ss_dssp EEEECSTTSSHHHHHHTHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHH
Confidence 889999999999999999984
No 331
>4dsu_A GTPase KRAS, isoform 2B; small G-protein, signaling, hydrolase; HET: GDP; 1.70A {Homo sapiens} PDB: 4dsn_A* 4dst_A* 4dso_A*
Probab=97.85 E-value=1.1e-05 Score=48.82 Aligned_cols=23 Identities=35% Similarity=0.746 Sum_probs=20.4
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-++|+|++|+|||||++.|.+..
T Consensus 6 ki~v~G~~~~GKSsli~~l~~~~ 28 (189)
T 4dsu_A 6 KLVVVGADGVGKSALTIQLIQNH 28 (189)
T ss_dssp EEEEECCTTSSHHHHHHHHHHSS
T ss_pred EEEEECCCCCCHHHHHHHHHhCC
Confidence 47899999999999999998654
No 332
>3bc1_A RAS-related protein RAB-27A; RAB27, GTPase, RAB, signaling protein, GDPNP, SLP2A, exophil GTP-binding, lipoprotein, membrane, methylation; HET: GNP; 1.80A {Mus musculus} PDB: 2iey_A* 2if0_A* 2zet_A*
Probab=97.85 E-value=1.1e-05 Score=48.93 Aligned_cols=23 Identities=17% Similarity=0.385 Sum_probs=20.4
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-++|+|++|+|||||+++|....
T Consensus 13 ki~v~G~~~~GKSsli~~l~~~~ 35 (195)
T 3bc1_A 13 KFLALGDSGVGKTSVLYQYTDGK 35 (195)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHhcCC
Confidence 47899999999999999998643
No 333
>1njg_A DNA polymerase III subunit gamma; rossman-like fold, AAA+ ATPase domains, sensor 1, sensor 2, transferase; HET: DNA; 2.20A {Escherichia coli} SCOP: c.37.1.20 PDB: 1njf_A*
Probab=97.85 E-value=1.3e-05 Score=49.88 Aligned_cols=24 Identities=21% Similarity=0.411 Sum_probs=21.6
Q ss_pred cEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 7 KTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 7 ~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
..+.|.||+|+|||||++.+...+
T Consensus 46 ~~~ll~G~~G~GKT~l~~~~~~~~ 69 (250)
T 1njg_A 46 HAYLFSGTRGVGKTSIARLLAKGL 69 (250)
T ss_dssp SEEEEECSTTSCHHHHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHh
Confidence 478999999999999999998765
No 334
>4b4t_K 26S protease regulatory subunit 6B homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.85 E-value=3.1e-05 Score=54.11 Aligned_cols=26 Identities=27% Similarity=0.413 Sum_probs=22.6
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
++=+.|.||+|+|||+|+++|+....
T Consensus 206 prGiLL~GPPGtGKT~lakAiA~~~~ 231 (428)
T 4b4t_K 206 PRGVLLYGPPGTGKTMLVKAVANSTK 231 (428)
T ss_dssp CCEEEEESCTTTTHHHHHHHHHHHHT
T ss_pred CceEEEECCCCCCHHHHHHHHHHHhC
Confidence 45588999999999999999998764
No 335
>2gks_A Bifunctional SAT/APS kinase; transferase, sulfurylase; HET: ADP; 2.31A {Aquifex aeolicus}
Probab=97.85 E-value=1.3e-05 Score=57.36 Aligned_cols=26 Identities=19% Similarity=0.183 Sum_probs=23.1
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
.+.+++|.|++||||||+++.|.+.+
T Consensus 371 ~~~~I~l~G~~GsGKSTia~~La~~L 396 (546)
T 2gks_A 371 QGFCVWLTGLPCAGKSTIAEILATML 396 (546)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHH
T ss_pred cceEEEccCCCCCCHHHHHHHHHHHh
Confidence 35689999999999999999998865
No 336
>2oil_A CATX-8, RAS-related protein RAB-25; G-protein, GDP, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 2.30A {Homo sapiens}
Probab=97.84 E-value=1.1e-05 Score=49.30 Aligned_cols=23 Identities=30% Similarity=0.652 Sum_probs=20.5
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-++|+|++|+|||||+++|....
T Consensus 27 ki~v~G~~~~GKSsLi~~l~~~~ 49 (193)
T 2oil_A 27 KVVLIGESGVGKTNLLSRFTRNE 49 (193)
T ss_dssp EEEEESSTTSSHHHHHHHHHHSC
T ss_pred EEEEECcCCCCHHHHHHHHhcCC
Confidence 47899999999999999998754
No 337
>2hxs_A RAB-26, RAS-related protein RAB-28; GTPase, signaling protein; HET: G3D; 1.10A {Homo sapiens} PDB: 2hy4_A* 3e5h_A*
Probab=97.84 E-value=1.4e-05 Score=48.07 Aligned_cols=23 Identities=17% Similarity=0.369 Sum_probs=20.3
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-++|+|++|+|||||+++|....
T Consensus 8 ki~v~G~~~~GKssl~~~l~~~~ 30 (178)
T 2hxs_A 8 KIVVLGDGASGKTSLTTCFAQET 30 (178)
T ss_dssp EEEEECCTTSSHHHHHHHHHGGG
T ss_pred EEEEECcCCCCHHHHHHHHHhCc
Confidence 47899999999999999998653
No 338
>4bas_A ADP-ribosylation factor, putative (small GTPase, putative); hydrolase; HET: GNP; 2.00A {Trypanosoma brucei TREU927}
Probab=97.84 E-value=9.2e-06 Score=49.71 Aligned_cols=26 Identities=12% Similarity=0.337 Sum_probs=21.9
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
...-++|+|++|+|||||+++|....
T Consensus 16 ~~~ki~v~G~~~~GKSsl~~~l~~~~ 41 (199)
T 4bas_A 16 TKLQVVMCGLDNSGKTTIINQVKPAQ 41 (199)
T ss_dssp CEEEEEEECCTTSCHHHHHHHHSCCC
T ss_pred CCcEEEEECCCCCCHHHHHHHHhcCC
Confidence 33468999999999999999998654
No 339
>3tw8_B RAS-related protein RAB-35; longin domain, RAB GTPase, guanine exchange factor; 2.10A {Homo sapiens}
Probab=97.84 E-value=8.7e-06 Score=48.88 Aligned_cols=23 Identities=26% Similarity=0.609 Sum_probs=20.2
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-++|+|++|+|||||++.|.+..
T Consensus 11 ~i~v~G~~~~GKssl~~~l~~~~ 33 (181)
T 3tw8_B 11 KLLIIGDSGVGKSSLLLRFADNT 33 (181)
T ss_dssp EEEEECCTTSCHHHHHHHHCSCC
T ss_pred EEEEECCCCCCHHHHHHHHhcCC
Confidence 47899999999999999997653
No 340
>2qtf_A Protein HFLX, GTP-binding protein; beta-alpha-barrels, nucleotide-binding, nucleotide binding protein; 2.00A {Sulfolobus solfataricus P2} PDB: 2qth_A* 3kxi_A* 3kxl_A 3kxk_A
Probab=97.84 E-value=9.5e-06 Score=55.44 Aligned_cols=23 Identities=26% Similarity=0.446 Sum_probs=20.5
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
.++|+|++|||||||+++|++..
T Consensus 181 ~V~lvG~~naGKSTLln~L~~~~ 203 (364)
T 2qtf_A 181 SIGIVGYTNSGKTSLFNSLTGLT 203 (364)
T ss_dssp EEEEECBTTSSHHHHHHHHHCC-
T ss_pred EEEEECCCCCCHHHHHHHHHCCC
Confidence 48999999999999999999765
No 341
>2qby_A CDC6 homolog 1, cell division control protein 6 homolog 1; winged-helix domain, helix-turn-helix, AAA+ ATPase domain, protein-DNA complex; HET: DNA SPD ADP; 3.35A {Sulfolobus solfataricus}
Probab=97.84 E-value=1.1e-05 Score=53.93 Aligned_cols=26 Identities=19% Similarity=0.354 Sum_probs=23.1
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
.+..++|.||+|+|||||++.+.+..
T Consensus 44 ~~~~vli~G~~G~GKTtl~~~l~~~~ 69 (386)
T 2qby_A 44 KPNNIFIYGLTGTGKTAVVKFVLSKL 69 (386)
T ss_dssp CCCCEEEEECTTSSHHHHHHHHHHHH
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHH
Confidence 46689999999999999999998865
No 342
>1upt_A ARL1, ADP-ribosylation factor-like protein 1; hydrolase/protein-binding, complex (GTPase/golgin), golgin-245, GRIP, golgin, GTPase, G-protein; HET: GTP; 1.7A {Homo sapiens} SCOP: c.37.1.8 PDB: 1r4a_A*
Probab=97.83 E-value=1.3e-05 Score=47.84 Aligned_cols=25 Identities=28% Similarity=0.466 Sum_probs=21.2
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
.--++|+|++|+|||||+++|....
T Consensus 7 ~~~i~v~G~~~~GKssl~~~l~~~~ 31 (171)
T 1upt_A 7 EMRILILGLDGAGKTTILYRLQVGE 31 (171)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHSS
T ss_pred ccEEEEECCCCCCHHHHHHHHhcCC
Confidence 3458999999999999999997643
No 343
>1m2o_B GTP-binding protein SAR1, GTP binding protein; zinc-finger, beta barrel, VWA domain, gelsolin domain,; HET: GNP; 2.50A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 2qtv_B*
Probab=97.83 E-value=1.1e-05 Score=49.64 Aligned_cols=23 Identities=26% Similarity=0.429 Sum_probs=20.6
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-++|+|++|+|||||+++|.+..
T Consensus 25 ki~~vG~~~vGKSsli~~l~~~~ 47 (190)
T 1m2o_B 25 KLLFLGLDNAGKTTLLHMLKNDR 47 (190)
T ss_dssp EEEEEESTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHhcCC
Confidence 57899999999999999998743
No 344
>2qz4_A Paraplegin; AAA+, SPG7, protease, ADP, structural genomics, structural G consortium, SGC, ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.22A {Homo sapiens}
Probab=97.83 E-value=1.6e-05 Score=50.92 Aligned_cols=26 Identities=23% Similarity=0.341 Sum_probs=22.8
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
++.+.|.||+|+|||++++.|+....
T Consensus 39 ~~~vll~G~~GtGKT~la~~la~~~~ 64 (262)
T 2qz4_A 39 PKGALLLGPPGCGKTLLAKAVATEAQ 64 (262)
T ss_dssp CCEEEEESCTTSSHHHHHHHHHHHHT
T ss_pred CceEEEECCCCCCHHHHHHHHHHHhC
Confidence 45688999999999999999998764
No 345
>1r8s_A ADP-ribosylation factor 1; protein transport/exchange factor, protein transport-exchang complex; HET: GDP; 1.46A {Bos taurus} SCOP: c.37.1.8 PDB: 1re0_A* 1s9d_A* 1u81_A* 1r8q_A* 1rrf_A* 1rrg_A* 1hur_A* 1o3y_A* 1j2j_A* 2j59_A* 1mr3_F* 2k5u_A* 3lrp_A* 3tjz_A* 3rd1_A* 2ksq_A* 2a5d_A* 2a5f_A* 2j5x_A* 1e0s_A* ...
Probab=97.83 E-value=1.3e-05 Score=47.58 Aligned_cols=22 Identities=27% Similarity=0.434 Sum_probs=19.8
Q ss_pred EEEEcCCCCCHHHHHHHHHhhC
Q psy4405 9 IALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 9 i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
++|+|++|+|||||+++|....
T Consensus 3 i~~~G~~~~GKssl~~~l~~~~ 24 (164)
T 1r8s_A 3 ILMVGLDAAGKTTILYKLKLGE 24 (164)
T ss_dssp EEEECSTTSSHHHHHHHHHHHC
T ss_pred EEEECCCCCCHHHHHHHHHcCC
Confidence 7899999999999999998654
No 346
>2wsm_A Hydrogenase expression/formation protein (HYPB); metal binding protein; 2.30A {Archaeoglobus fulgidus}
Probab=97.83 E-value=1.4e-05 Score=49.96 Aligned_cols=25 Identities=24% Similarity=0.424 Sum_probs=21.9
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-..++|+|++|+|||||++.|+...
T Consensus 30 ~~~i~i~G~~g~GKTTl~~~l~~~~ 54 (221)
T 2wsm_A 30 TVAVNIMGAIGSGKTLLIERTIERI 54 (221)
T ss_dssp CEEEEEEECTTSCHHHHHHHHHHHH
T ss_pred ceEEEEEcCCCCCHHHHHHHHHHHh
Confidence 3578999999999999999998763
No 347
>1nrj_B SR-beta, signal recognition particle receptor beta subunit; transmembrane, endoplasmic reticulum, GTP-binding; HET: GTP; 1.70A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=97.83 E-value=1.2e-05 Score=50.15 Aligned_cols=24 Identities=25% Similarity=0.401 Sum_probs=21.4
Q ss_pred cEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 7 KTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 7 ~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
.-++|+|++|+|||||+++|....
T Consensus 13 ~~i~~~G~~g~GKTsl~~~l~~~~ 36 (218)
T 1nrj_B 13 PSIIIAGPQNSGKTSLLTLLTTDS 36 (218)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHSS
T ss_pred CEEEEECCCCCCHHHHHHHHhcCC
Confidence 368899999999999999998765
No 348
>1fzq_A ADP-ribosylation factor-like protein 3; protein-GDP complex without magnesium, ARF family, RAS superfamily, G-domain, signaling protein; HET: MES GDP; 1.70A {Mus musculus} SCOP: c.37.1.8 PDB: 3bh7_A* 3bh6_A*
Probab=97.83 E-value=1.2e-05 Score=49.11 Aligned_cols=25 Identities=28% Similarity=0.464 Sum_probs=21.5
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
.--++|+|++|+|||||+++|....
T Consensus 16 ~~ki~ivG~~~vGKSsL~~~l~~~~ 40 (181)
T 1fzq_A 16 EVRILLLGLDNAGKTTLLKQLASED 40 (181)
T ss_dssp CEEEEEEESTTSSHHHHHHHHCCSC
T ss_pred ceEEEEECCCCCCHHHHHHHHhcCC
Confidence 3468999999999999999998653
No 349
>3iev_A GTP-binding protein ERA; ERA, GTPase, KH domain, anti-SD, 16S rRNA, 30S ribosome ASSE GTP-binding, nucleotide-binding; HET: GNP; 1.90A {Aquifex aeolicus} PDB: 3r9w_A* 3r9x_A*
Probab=97.83 E-value=2.2e-05 Score=52.25 Aligned_cols=24 Identities=33% Similarity=0.544 Sum_probs=21.5
Q ss_pred cEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 7 KTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 7 ~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-.++|+|.+|||||||+++|.+..
T Consensus 11 g~v~ivG~~nvGKSTLin~l~g~~ 34 (308)
T 3iev_A 11 GYVAIVGKPNVGKSTLLNNLLGTK 34 (308)
T ss_dssp EEEEEECSTTSSHHHHHHHHHTSC
T ss_pred CEEEEECCCCCcHHHHHHHHhCCC
Confidence 378999999999999999998764
No 350
>2cxx_A Probable GTP-binding protein ENGB; structural genomics, NPPSFA, national P protein structural and functional analyses; HET: GDP; 1.70A {Pyrococcus horikoshii} SCOP: c.37.1.8
Probab=97.83 E-value=9.8e-06 Score=49.17 Aligned_cols=23 Identities=39% Similarity=0.535 Sum_probs=20.3
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-++|+|++|+|||||+++|.+..
T Consensus 3 ki~v~G~~~~GKSsli~~l~~~~ 25 (190)
T 2cxx_A 3 TIIFAGRSNVGKSTLIYRLTGKK 25 (190)
T ss_dssp EEEEEEBTTSSHHHHHHHHHSCC
T ss_pred EEEEECCCCCCHHHHHHHHhCcC
Confidence 37899999999999999998754
No 351
>2y8e_A RAB-protein 6, GH09086P, RAB6; hydrolase, nucleotide binding, GTP binding; HET: GNP; 1.39A {Drosophila melanogaster} PDB: 3cwz_A* 1yzq_A* 2gil_A* 2e9s_A* 2fe4_A* 2ffq_A* 1d5c_A*
Probab=97.82 E-value=1.2e-05 Score=48.15 Aligned_cols=23 Identities=26% Similarity=0.569 Sum_probs=20.2
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-++|+|++|+|||||++.|....
T Consensus 16 ~i~v~G~~~~GKssli~~l~~~~ 38 (179)
T 2y8e_A 16 KLVFLGEQSVGKTSLITRFMYDS 38 (179)
T ss_dssp EEEEEESTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHcCC
Confidence 47899999999999999998643
No 352
>3t1o_A Gliding protein MGLA; G domain containing protein, bacterial GTPase, bacterial POL motility, POLE localisation, alpha/beta protein; HET: GDP; 1.90A {Thermus thermophilus} PDB: 3t12_A* 3t1q_A* 3t1t_A* 3t1v_A*
Probab=97.82 E-value=1.5e-05 Score=48.45 Aligned_cols=24 Identities=21% Similarity=0.185 Sum_probs=21.3
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
-++|+|++|+|||||++.|.+.+.
T Consensus 16 ki~vvG~~~~GKssL~~~l~~~~~ 39 (198)
T 3t1o_A 16 KIVYYGPGLSGKTTNLKWIYSKVP 39 (198)
T ss_dssp EEEEECSTTSSHHHHHHHHHHTSC
T ss_pred EEEEECCCCCCHHHHHHHHHhhcc
Confidence 478999999999999999987765
No 353
>1ypw_A Transitional endoplasmic reticulum ATPase; AAA, P97/VCP, ERAD, CDC48; HET: ADP ANP; 3.50A {Mus musculus} PDB: 1oz4_A* 1yq0_A* 1yqi_A* 1r7r_A* 3cf2_A* 3cf1_A* 3cf3_A*
Probab=97.82 E-value=1.3e-05 Score=59.65 Aligned_cols=28 Identities=21% Similarity=0.342 Sum_probs=24.9
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
.++.++|+||+|+|||||+++|++.++.
T Consensus 237 ~~~~vLL~Gp~GtGKTtLarala~~l~~ 264 (806)
T 1ypw_A 237 PPRGILLYGPPGTGKTLIARAVANETGA 264 (806)
T ss_dssp CCCEEEECSCTTSSHHHHHHHHHHTTTC
T ss_pred CCCeEEEECcCCCCHHHHHHHHHHHcCC
Confidence 4678999999999999999999998753
No 354
>3con_A GTPase NRAS; structural genomics consortium, SGC, GDP, oncogene, disease mutation, golgi apparatus, GTP-binding, lipoprotein membrane, methylation; HET: GDP; 1.65A {Homo sapiens} PDB: 2pmx_A* 3gft_A* 4q21_A*
Probab=97.81 E-value=1.4e-05 Score=48.73 Aligned_cols=23 Identities=35% Similarity=0.719 Sum_probs=20.5
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-++|+|++|+|||||++.|....
T Consensus 23 ki~vvG~~~~GKSsli~~l~~~~ 45 (190)
T 3con_A 23 KLVVVGAGGVGKSALTIQLIQNH 45 (190)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSS
T ss_pred EEEEECcCCCCHHHHHHHHHcCC
Confidence 57899999999999999998654
No 355
>3ihw_A Centg3; RAS, centaurin, GTPase, structural genomics, structural genomics consortium, SGC, alternative splicing, ANK repeat, cytoplasm, GTP-binding; 1.92A {Homo sapiens} SCOP: c.37.1.0
Probab=97.81 E-value=1.9e-05 Score=48.41 Aligned_cols=23 Identities=22% Similarity=0.473 Sum_probs=20.1
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-++|+|++|+|||||++++....
T Consensus 22 ki~ivG~~~vGKSsL~~~~~~~~ 44 (184)
T 3ihw_A 22 KVGIVGNLSSGKSALVHRYLTGT 44 (184)
T ss_dssp EEEEECCTTSCHHHHHHHHHHSS
T ss_pred EEEEECCCCCCHHHHHHHHhcCC
Confidence 58999999999999999887653
No 356
>1z0f_A RAB14, member RAS oncogene family; RAB GTPase, vesicular trafficking, protein transport; HET: GDP; 2.15A {Homo sapiens} SCOP: c.37.1.8 PDB: 2aed_A* 4drz_A*
Probab=97.81 E-value=1.4e-05 Score=47.83 Aligned_cols=23 Identities=22% Similarity=0.455 Sum_probs=20.6
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-++|+|++|+|||||+++|....
T Consensus 17 ~i~v~G~~~~GKSsli~~l~~~~ 39 (179)
T 1z0f_A 17 KYIIIGDMGVGKSCLLHQFTEKK 39 (179)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHcCC
Confidence 58899999999999999998754
No 357
>2a9k_A RAS-related protein RAL-A; bacterial ADP-ribosyltransferase, RAL, RHO, GD binding; HET: GDP NAD; 1.73A {Homo sapiens} SCOP: c.37.1.8 PDB: 2a78_A*
Probab=97.81 E-value=1.4e-05 Score=48.17 Aligned_cols=23 Identities=26% Similarity=0.622 Sum_probs=20.4
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-++|+|++|+|||||++.|....
T Consensus 20 ki~v~G~~~~GKSsli~~l~~~~ 42 (187)
T 2a9k_A 20 KVIMVGSGGVGKSALTLQFMYDE 42 (187)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHhhCC
Confidence 58899999999999999998654
No 358
>1g8f_A Sulfate adenylyltransferase; alpha-beta protein, beta-barrel, rossmann-fold, kinase fold; 1.95A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1g8g_A* 1g8h_A* 1j70_A 1jec_A 1jed_A* 1jee_A*
Probab=97.81 E-value=9.8e-06 Score=57.77 Aligned_cols=27 Identities=22% Similarity=0.208 Sum_probs=24.4
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
++.+|+|+|.+||||||+.++|.+.+.
T Consensus 394 ~~~~I~l~GlsGsGKSTIa~~La~~L~ 420 (511)
T 1g8f_A 394 QGFSIVLGNSLTVSREQLSIALLSTFL 420 (511)
T ss_dssp CCEEEEECTTCCSCHHHHHHHHHHHHT
T ss_pred cceEEEecccCCCCHHHHHHHHHHHHH
Confidence 566899999999999999999999875
No 359
>2g6b_A RAS-related protein RAB-26; G-protein, GTP analogue, structural genomics, structural genomics consortium, SGC, unknown function; HET: GNP; 2.00A {Homo sapiens} SCOP: c.37.1.8
Probab=97.81 E-value=1.5e-05 Score=47.99 Aligned_cols=23 Identities=35% Similarity=0.595 Sum_probs=20.5
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-++|+|++|+|||||+++|....
T Consensus 12 ~i~v~G~~~~GKssli~~l~~~~ 34 (180)
T 2g6b_A 12 KVMLVGDSGVGKTCLLVRFKDGA 34 (180)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEEECcCCCCHHHHHHHHHhCC
Confidence 47899999999999999998754
No 360
>1f6b_A SAR1; gtpases, N-terminal helix, Mg-containing complex, protein transport; HET: GDP; 1.70A {Cricetulus griseus} SCOP: c.37.1.8 PDB: 2fmx_A* 2fa9_A* 2gao_A*
Probab=97.81 E-value=7.5e-06 Score=50.77 Aligned_cols=22 Identities=23% Similarity=0.439 Sum_probs=19.7
Q ss_pred EEEEEcCCCCCHHHHHHHHHhh
Q psy4405 8 TIALVGCQGVGRRTLKARLINS 29 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~ 29 (91)
-++|+|++|+|||||+++|.+.
T Consensus 27 ki~lvG~~~vGKSsLi~~l~~~ 48 (198)
T 1f6b_A 27 KLVFLGLDNAGKTTLLHMLKDD 48 (198)
T ss_dssp EEEEEEETTSSHHHHHHHHSCC
T ss_pred EEEEECCCCCCHHHHHHHHhcC
Confidence 5789999999999999999753
No 361
>4b4t_L 26S protease subunit RPT4; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.80 E-value=4.2e-05 Score=53.59 Aligned_cols=26 Identities=23% Similarity=0.310 Sum_probs=22.8
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
++=+.|.||+|+|||+|+++|+....
T Consensus 215 prGvLL~GPPGtGKTllAkAiA~e~~ 240 (437)
T 4b4t_L 215 PKGVLLYGPPGTGKTLLAKAVAATIG 240 (437)
T ss_dssp CCEEEEESCTTSSHHHHHHHHHHHHT
T ss_pred CCeEEEECCCCCcHHHHHHHHHHHhC
Confidence 45688999999999999999998764
No 362
>2ffh_A Protein (FFH); SRP54, signal recognition particle, GTPase, M domain, RNA-binding, signal sequence-binding, helix-turn-helix, protein targeting; 3.20A {Thermus aquaticus} SCOP: a.24.13.1 a.36.1.1 c.37.1.10 PDB: 2iy3_A
Probab=97.80 E-value=1.3e-05 Score=56.00 Aligned_cols=27 Identities=37% Similarity=0.405 Sum_probs=24.5
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
++++++|+|++|+||||++..|+..+.
T Consensus 97 ~~~vi~i~G~~GsGKTT~~~~LA~~l~ 123 (425)
T 2ffh_A 97 DRNLWFLVGLQGSGKTTTAAKLALYYK 123 (425)
T ss_dssp SSEEEEEECCTTSSHHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHH
Confidence 478999999999999999999998874
No 363
>2efe_B Small GTP-binding protein-like; GEF, GTPase, VPS9, nucleotide, transport protein; HET: GNH; 2.08A {Arabidopsis thaliana} PDB: 2efd_B 2efc_B* 2efh_B*
Probab=97.80 E-value=1.5e-05 Score=47.93 Aligned_cols=23 Identities=26% Similarity=0.593 Sum_probs=20.4
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-++|+|++|+|||||++.|....
T Consensus 14 ki~v~G~~~~GKSsli~~l~~~~ 36 (181)
T 2efe_B 14 KLVLLGDVGAGKSSLVLRFVKDQ 36 (181)
T ss_dssp EEEEECCTTSCHHHHHHHHHHCC
T ss_pred EEEEECcCCCCHHHHHHHHHcCC
Confidence 47899999999999999998754
No 364
>2bme_A RAB4A, RAS-related protein RAB4A; GTP-binding protein, vesicular transport, endocytosis, prenylation, protein transport, transport; HET: GNP; 1.57A {Homo sapiens} SCOP: c.37.1.8 PDB: 2bmd_A* 1yu9_A* 1z0k_A*
Probab=97.80 E-value=1.4e-05 Score=48.41 Aligned_cols=23 Identities=22% Similarity=0.508 Sum_probs=20.3
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-++|+|++|+|||||++.|....
T Consensus 12 ki~v~G~~~~GKSsli~~l~~~~ 34 (186)
T 2bme_A 12 KFLVIGNAGTGKSCLLHQFIEKK 34 (186)
T ss_dssp EEEEEESTTSSHHHHHHHHHHSS
T ss_pred EEEEECCCCCCHHHHHHHHHcCC
Confidence 47899999999999999998654
No 365
>4hlc_A DTMP kinase, thymidylate kinase; TMK, MRSA, pipiridine, transfera transferase inhibitor complex; HET: T05; 1.55A {Staphylococcus aureus subsp} PDB: 2cck_A 4gfd_A* 4gsy_A* 4hdc_A* 4hej_A* 2ccj_A* 4hld_A* 2ccg_A*
Probab=97.80 E-value=1.4e-05 Score=50.61 Aligned_cols=26 Identities=19% Similarity=0.276 Sum_probs=23.8
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
|+.|+|-|+-||||||+++.|...+.
T Consensus 2 ~kFI~~EG~dGsGKsTq~~~L~~~L~ 27 (205)
T 4hlc_A 2 SAFITFEGPEGSGKTTVINEVYHRLV 27 (205)
T ss_dssp CEEEEEECCTTSCHHHHHHHHHHHHT
T ss_pred CCEEEEECCCCCcHHHHHHHHHHHHH
Confidence 67899999999999999999998774
No 366
>3kkq_A RAS-related protein M-RAS; GTP-binding, GTPase, signaling protein; HET: GDP; 1.20A {Mus musculus} SCOP: c.37.1.8 PDB: 3kkp_A* 3kko_A* 3pit_A* 3pir_A* 1x1r_A* 1x1s_A*
Probab=97.79 E-value=2.2e-05 Score=47.43 Aligned_cols=23 Identities=26% Similarity=0.524 Sum_probs=20.3
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-++|+|++|+|||||+++|....
T Consensus 20 ki~v~G~~~~GKSsl~~~l~~~~ 42 (183)
T 3kkq_A 20 KLVVVGDGGVGKSALTIQFFQKI 42 (183)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHhCC
Confidence 47899999999999999998653
No 367
>4b4t_M 26S protease regulatory subunit 6A; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.79 E-value=4.5e-05 Score=53.42 Aligned_cols=26 Identities=19% Similarity=0.235 Sum_probs=22.9
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
++-+.|.||+|+|||.|+++|+....
T Consensus 215 prGvLLyGPPGTGKTllAkAiA~e~~ 240 (434)
T 4b4t_M 215 PKGALMYGPPGTGKTLLARACAAQTN 240 (434)
T ss_dssp CCEEEEESCTTSSHHHHHHHHHHHHT
T ss_pred CCeeEEECcCCCCHHHHHHHHHHHhC
Confidence 45688999999999999999998764
No 368
>1m7b_A RND3/RHOE small GTP-binding protein; small GTPase, signaling protein; HET: GTP; 2.00A {Homo sapiens} SCOP: c.37.1.8 PDB: 2v55_B*
Probab=97.79 E-value=1.4e-05 Score=48.63 Aligned_cols=23 Identities=22% Similarity=0.313 Sum_probs=20.4
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-++|+|++|+|||||+++|....
T Consensus 9 ki~v~G~~~vGKSsli~~l~~~~ 31 (184)
T 1m7b_A 9 KIVVVGDSQCGKTALLHVFAKDC 31 (184)
T ss_dssp EEEEEESTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHhcCC
Confidence 47899999999999999998753
No 369
>3tkl_A RAS-related protein RAB-1A; vesicle trafficking, protein transport-protein binding compl; HET: GTP; 2.18A {Homo sapiens}
Probab=97.79 E-value=1.6e-05 Score=48.49 Aligned_cols=23 Identities=30% Similarity=0.592 Sum_probs=20.6
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-++|+|++|+|||||+++|....
T Consensus 18 ki~v~G~~~~GKSsli~~l~~~~ 40 (196)
T 3tkl_A 18 KLLLIGDSGVGKSCLLLRFADDT 40 (196)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEEECcCCCCHHHHHHHHHcCC
Confidence 47999999999999999998754
No 370
>2xtp_A GTPase IMAP family member 2; immune system, G protein; HET: MSE; 1.50A {Homo sapiens} PDB: 2xto_A* 2xtm_A* 2xtn_A* 3p1j_A
Probab=97.78 E-value=1.8e-05 Score=50.96 Aligned_cols=24 Identities=25% Similarity=0.450 Sum_probs=21.2
Q ss_pred cEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 7 KTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 7 ~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
..|+|+|++|||||||++.|.+..
T Consensus 23 ~~I~lvG~~g~GKStl~n~l~~~~ 46 (260)
T 2xtp_A 23 LRIILVGKTGTGKSAAGNSILRKQ 46 (260)
T ss_dssp EEEEEEECTTSCHHHHHHHHHTSC
T ss_pred eEEEEECCCCCCHHHHHHHHhCCC
Confidence 368999999999999999998754
No 371
>1vg8_A RAS-related protein RAB-7; GTP-binding protein, protein transport; HET: GNP; 1.70A {Rattus norvegicus} SCOP: c.37.1.8 PDB: 1vg0_B* 3law_A* 1t91_A* 1yhn_A* 1vg1_A* 1vg9_B*
Probab=97.78 E-value=1.7e-05 Score=48.91 Aligned_cols=23 Identities=26% Similarity=0.621 Sum_probs=20.6
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-++|+|++|+|||||++.|.+..
T Consensus 10 ki~v~G~~~~GKSsli~~l~~~~ 32 (207)
T 1vg8_A 10 KVIILGDSGVGKTSLMNQYVNKK 32 (207)
T ss_dssp EEEEECCTTSSHHHHHHHHHHSC
T ss_pred EEEEECcCCCCHHHHHHHHHcCC
Confidence 57899999999999999998764
No 372
>1fnn_A CDC6P, cell division control protein 6; ORC1, AAA protein, DNA replication initation factor, cell cycle control factor; HET: ADP; 2.00A {Pyrobaculum aerophilum} SCOP: a.4.5.11 c.37.1.20
Probab=97.78 E-value=2e-05 Score=52.92 Aligned_cols=24 Identities=21% Similarity=0.321 Sum_probs=22.1
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
.++|.||+|+|||||++.+.+...
T Consensus 46 ~~li~G~~G~GKTtl~~~l~~~~~ 69 (389)
T 1fnn_A 46 RATLLGRPGTGKTVTLRKLWELYK 69 (389)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHT
T ss_pred eEEEECCCCCCHHHHHHHHHHHHh
Confidence 899999999999999999988764
No 373
>2zr9_A Protein RECA, recombinase A; recombination, RECA mutants, DNA-repair, ATP-binding, DNA DA recombination, DNA repair, DNA-binding; HET: DTP; 2.50A {Mycobacterium smegmatis str} PDB: 2zr0_A* 2zra_A* 2zrb_A 2zrm_A* 1ubc_A* 1ubf_A* 1ubg_A* 1ube_A* 2g88_A* 2odw_A* 2oe2_A 2oep_A* 2oes_A 2ofo_A 2zr7_A 2odn_A* 2zrn_A 2zro_A* 2zrp_A* 2zre_A* ...
Probab=97.78 E-value=1.7e-05 Score=53.97 Aligned_cols=26 Identities=15% Similarity=0.377 Sum_probs=22.9
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
+|+++.|.||+|+|||||+..++...
T Consensus 60 ~G~iv~I~G~pGsGKTtLal~la~~~ 85 (349)
T 2zr9_A 60 RGRVIEIYGPESSGKTTVALHAVANA 85 (349)
T ss_dssp TTSEEEEEESTTSSHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHH
Confidence 58999999999999999998887543
No 374
>4b4t_J 26S protease regulatory subunit 8 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.78 E-value=3.9e-05 Score=53.30 Aligned_cols=26 Identities=23% Similarity=0.364 Sum_probs=22.4
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
++=+.|.||+|+|||.|+++|+....
T Consensus 182 prGvLL~GPPGTGKTllAkAiA~e~~ 207 (405)
T 4b4t_J 182 PKGVILYGPPGTGKTLLARAVAHHTD 207 (405)
T ss_dssp CCCEEEESCSSSSHHHHHHHHHHHHT
T ss_pred CCceEEeCCCCCCHHHHHHHHHHhhC
Confidence 34488999999999999999998764
No 375
>2gf9_A RAS-related protein RAB-3D; G-protein, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 1.53A {Homo sapiens} PDB: 3rab_A*
Probab=97.78 E-value=1.7e-05 Score=48.41 Aligned_cols=23 Identities=22% Similarity=0.483 Sum_probs=20.5
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-++|+|++|+|||||+++|.+..
T Consensus 24 ki~vvG~~~~GKSsli~~l~~~~ 46 (189)
T 2gf9_A 24 KLLLIGNSSVGKTSFLFRYADDS 46 (189)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHcCC
Confidence 47899999999999999998754
No 376
>1mh1_A RAC1; GTP-binding, GTPase, small G-protein, RHO family, RAS super family; HET: GNP; 1.38A {Homo sapiens} SCOP: c.37.1.8 PDB: 1hh4_A* 2p2l_A* 2h7v_A* 1g4u_R* 1i4d_D* 1i4l_D* 2vrw_A 1e96_A* 1i4t_D* 2rmk_A* 2yin_C 1ryf_A* 1ryh_A* 3su8_A* 3sua_A* 2fju_A* 1he1_C* 2nz8_A 1foe_B 3bji_C ...
Probab=97.78 E-value=1.8e-05 Score=47.81 Aligned_cols=23 Identities=22% Similarity=0.300 Sum_probs=20.1
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-++|+|++|+|||||+++|....
T Consensus 7 ~i~~~G~~~~GKssl~~~l~~~~ 29 (186)
T 1mh1_A 7 KCVVVGDGAVGKTCLLISYTTNA 29 (186)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSS
T ss_pred EEEEECCCCCCHHHHHHHHHcCC
Confidence 47899999999999999998643
No 377
>3hws_A ATP-dependent CLP protease ATP-binding subunit CL; CLPXP, AAA+ molecular machine, hexamer, asymmetric,, ATP-BIN chaperone, metal-binding; HET: ADP; 3.25A {Escherichia coli} PDB: 3hte_A
Probab=97.77 E-value=2.1e-05 Score=53.11 Aligned_cols=27 Identities=26% Similarity=0.373 Sum_probs=23.7
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
.+..+.|.||+|+|||++++.|+..+.
T Consensus 50 ~~~~vll~GppGtGKT~la~~ia~~~~ 76 (363)
T 3hws_A 50 GKSNILLIGPTGSGKTLLAETLARLLD 76 (363)
T ss_dssp CCCCEEEECCTTSSHHHHHHHHHHHTT
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHcC
Confidence 355789999999999999999998874
No 378
>1z06_A RAS-related protein RAB-33B; RAB GTPase, RAB33B GTPase, vesicular trafficking, protein transport; HET: GNP; 1.81A {Mus musculus} SCOP: c.37.1.8 PDB: 2g77_B*
Probab=97.77 E-value=1.9e-05 Score=48.22 Aligned_cols=23 Identities=26% Similarity=0.466 Sum_probs=20.3
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-++|+|++|+|||||+++|....
T Consensus 22 ki~v~G~~~~GKSsli~~l~~~~ 44 (189)
T 1z06_A 22 KIIVIGDSNVGKTCLTYRFCAGR 44 (189)
T ss_dssp EEEEECCTTSSHHHHHHHHHHSS
T ss_pred EEEEECCCCCCHHHHHHHHHcCC
Confidence 58999999999999999998643
No 379
>1j8m_F SRP54, signal recognition 54 kDa protein; signaling protein; 2.00A {Acidianus ambivalens} SCOP: a.24.13.1 c.37.1.10 PDB: 1j8y_F
Probab=97.76 E-value=1e-05 Score=53.88 Aligned_cols=27 Identities=33% Similarity=0.391 Sum_probs=24.0
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
++++++++|++|+||||++..|+..+.
T Consensus 97 ~~~vi~i~G~~G~GKTT~~~~la~~~~ 123 (297)
T 1j8m_F 97 IPYVIMLVGVQGTGKTTTAGKLAYFYK 123 (297)
T ss_dssp SSEEEEEECSSCSSTTHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHH
Confidence 378999999999999999999997764
No 380
>2fg5_A RAB-22B, RAS-related protein RAB-31; G-protein, GTP analogue, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GNP; 2.80A {Homo sapiens} SCOP: c.37.1.8
Probab=97.76 E-value=1.8e-05 Score=48.60 Aligned_cols=23 Identities=26% Similarity=0.686 Sum_probs=20.5
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-++|+|++|+|||||++.|....
T Consensus 25 ki~vvG~~~~GKSsli~~l~~~~ 47 (192)
T 2fg5_A 25 KVCLLGDTGVGKSSIVCRFVQDH 47 (192)
T ss_dssp EEEEEECTTSSHHHHHHHHHHCC
T ss_pred EEEEECcCCCCHHHHHHHHhcCC
Confidence 47899999999999999998754
No 381
>2cjw_A GTP-binding protein GEM; nucleotide-binding, small GTPase, conformational change, cysteine-modified, G-protein hydrolase; HET: GDP; 2.10A {Homo sapiens} PDB: 2cjw_B* 2ht6_A*
Probab=97.76 E-value=1.9e-05 Score=48.78 Aligned_cols=22 Identities=36% Similarity=0.599 Sum_probs=19.9
Q ss_pred EEEEEcCCCCCHHHHHHHHHhh
Q psy4405 8 TIALVGCQGVGRRTLKARLINS 29 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~ 29 (91)
-++|+|.+|+|||||++++.+.
T Consensus 8 kv~lvG~~~vGKSsL~~~~~~~ 29 (192)
T 2cjw_A 8 RVVLIGEQGVGKSTLANIFAGV 29 (192)
T ss_dssp EEEEECSTTSSHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhcC
Confidence 4889999999999999999864
No 382
>2a5j_A RAS-related protein RAB-2B; GTPase, signal transduction, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 1.50A {Homo sapiens} SCOP: c.37.1.8 PDB: 1z0a_A*
Probab=97.75 E-value=1.9e-05 Score=48.29 Aligned_cols=23 Identities=22% Similarity=0.475 Sum_probs=20.4
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-++|+|++|+|||||+++|....
T Consensus 23 ki~v~G~~~~GKSsli~~l~~~~ 45 (191)
T 2a5j_A 23 KYIIIGDTGVGKSCLLLQFTDKR 45 (191)
T ss_dssp EEEEESSTTSSHHHHHHHHHHSC
T ss_pred EEEEECcCCCCHHHHHHHHhcCC
Confidence 47899999999999999998754
No 383
>3n70_A Transport activator; sigma-54, ntpase, PSI, MCSG, structural genomics, center for structural genomics; 2.80A {Escherichia coli}
Probab=97.75 E-value=2.2e-05 Score=46.70 Aligned_cols=26 Identities=27% Similarity=0.248 Sum_probs=22.6
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
.+..+.|.||+|+|||++++.|....
T Consensus 23 ~~~~vll~G~~GtGKt~lA~~i~~~~ 48 (145)
T 3n70_A 23 TDIAVWLYGAPGTGRMTGARYLHQFG 48 (145)
T ss_dssp CCSCEEEESSTTSSHHHHHHHHHHSS
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHhC
Confidence 34578999999999999999998765
No 384
>1zbd_A Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: c.37.1.8
Probab=97.75 E-value=2e-05 Score=48.59 Aligned_cols=23 Identities=22% Similarity=0.483 Sum_probs=20.4
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-++|+|++|+|||||+++|....
T Consensus 10 ki~v~G~~~~GKSsli~~l~~~~ 32 (203)
T 1zbd_A 10 KILIIGNSSVGKTSFLFRYADDS 32 (203)
T ss_dssp EEEEECSTTSSHHHHHHHHHTCC
T ss_pred EEEEECCCCCCHHHHHHHHhcCC
Confidence 47899999999999999998754
No 385
>2bov_A RAla, RAS-related protein RAL-A; C3BOT, exoenzyme, RAla, GTPase, ribosylating toxin, GTP-binding, lipoprotein, prenylation; HET: GDP; 2.66A {Homo sapiens}
Probab=97.74 E-value=2.5e-05 Score=47.95 Aligned_cols=23 Identities=26% Similarity=0.622 Sum_probs=20.4
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-++|+|++|+|||||++.|....
T Consensus 16 ki~v~G~~~~GKSsli~~l~~~~ 38 (206)
T 2bov_A 16 KVIMVGSGGVGKSALTLQFMYDE 38 (206)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHhCC
Confidence 58899999999999999998654
No 386
>1ksh_A ARF-like protein 2; small GTPase, small GTP-binding protein, ARF family; HET: CME GDP; 1.80A {Mus musculus} SCOP: c.37.1.8 PDB: 1ksg_A* 1ksj_A* 3doe_A* 3dof_A*
Probab=97.74 E-value=1.7e-05 Score=48.11 Aligned_cols=24 Identities=13% Similarity=0.376 Sum_probs=20.9
Q ss_pred cEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 7 KTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 7 ~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
--++|+|++|+|||||+++|.+..
T Consensus 19 ~~i~v~G~~~~GKssl~~~l~~~~ 42 (186)
T 1ksh_A 19 LRLLMLGLDNAGKTTILKKFNGED 42 (186)
T ss_dssp EEEEEECSTTSSHHHHHHHHTTCC
T ss_pred eEEEEECCCCCCHHHHHHHHhcCC
Confidence 358899999999999999998654
No 387
>3dz8_A RAS-related protein RAB-3B; GDP, GTPase, structural genomics consortium, SGC, cell GTP-binding, lipoprotein, membrane, methylation; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8
Probab=97.74 E-value=1.9e-05 Score=48.32 Aligned_cols=23 Identities=17% Similarity=0.460 Sum_probs=20.7
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-++|+|++|+|||||+++|.+..
T Consensus 25 ki~v~G~~~~GKSsli~~l~~~~ 47 (191)
T 3dz8_A 25 KLLIIGNSSVGKTSFLFRYADDT 47 (191)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHT
T ss_pred EEEEECCCCcCHHHHHHHHhcCC
Confidence 47899999999999999998765
No 388
>2hf9_A Probable hydrogenase nickel incorporation protein HYPB; alpha and beta protein; HET: GSP; 1.90A {Methanocaldococcus jannaschii} PDB: 2hf8_A*
Probab=97.74 E-value=2.4e-05 Score=49.09 Aligned_cols=25 Identities=24% Similarity=0.434 Sum_probs=21.8
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
...++|+|.+|+|||||++.|+...
T Consensus 38 ~~~i~ivG~~gvGKTtl~~~l~~~~ 62 (226)
T 2hf9_A 38 VVAFDFMGAIGSGKTLLIEKLIDNL 62 (226)
T ss_dssp CEEEEEEESTTSSHHHHHHHHHHHH
T ss_pred CeEEEEEcCCCCCHHHHHHHHHHHh
Confidence 4578999999999999999998764
No 389
>2p5s_A RAS and EF-hand domain containing; G-protein, RAB, GDP, structural genomics, SGC, structural genomics consortium, signaling protein; HET: GDP; 2.15A {Homo sapiens}
Probab=97.74 E-value=2.6e-05 Score=48.10 Aligned_cols=24 Identities=29% Similarity=0.463 Sum_probs=21.1
Q ss_pred cEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 7 KTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 7 ~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
--++|+|++|+|||||+++|....
T Consensus 29 ~ki~v~G~~~~GKSsli~~l~~~~ 52 (199)
T 2p5s_A 29 YKIVLAGDAAVGKSSFLMRLCKNE 52 (199)
T ss_dssp EEEEEESSTTSSHHHHHHHHHHCC
T ss_pred eEEEEECcCCCCHHHHHHHHHhCC
Confidence 358999999999999999998654
No 390
>1x3s_A RAS-related protein RAB-18; GTPase, GNP, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: GNP; 1.32A {Homo sapiens} SCOP: c.37.1.8
Probab=97.73 E-value=2.2e-05 Score=47.78 Aligned_cols=23 Identities=30% Similarity=0.626 Sum_probs=20.6
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-++|+|++|+|||||+++|....
T Consensus 17 ~i~v~G~~~~GKssli~~l~~~~ 39 (195)
T 1x3s_A 17 KILIIGESGVGKSSLLLRFTDDT 39 (195)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHcCC
Confidence 58899999999999999998754
No 391
>1m8p_A Sulfate adenylyltransferase; rossmann fold, phosphosulfate binding, T-state; HET: PPS; 2.60A {Penicillium chrysogenum} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1i2d_A*
Probab=97.73 E-value=1.8e-05 Score=57.00 Aligned_cols=27 Identities=22% Similarity=0.226 Sum_probs=23.6
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
++.+|+|.|++||||||+++.|.+.+.
T Consensus 395 ~~~~I~l~GlsGSGKSTiA~~La~~L~ 421 (573)
T 1m8p_A 395 QGFTIFLTGYMNSGKDAIARALQVTLN 421 (573)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred cceEEEeecCCCCCHHHHHHHHHHHhc
Confidence 456899999999999999999988753
No 392
>1moz_A ARL1, ADP-ribosylation factor-like protein 1; GTP-binding, protein binding; HET: GDP; 3.17A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=97.73 E-value=1.3e-05 Score=48.46 Aligned_cols=23 Identities=30% Similarity=0.469 Sum_probs=20.1
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHh
Q psy4405 6 RKTIALVGCQGVGRRTLKARLIN 28 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~ 28 (91)
.--++|+|++|+|||||+++|..
T Consensus 18 ~~~i~v~G~~~~GKssli~~l~~ 40 (183)
T 1moz_A 18 ELRILILGLDGAGKTTILYRLQI 40 (183)
T ss_dssp CEEEEEEEETTSSHHHHHHHTCC
T ss_pred ccEEEEECCCCCCHHHHHHHHhc
Confidence 44689999999999999999874
No 393
>1ko7_A HPR kinase/phosphatase; protein kinase, phosphotransfer, protein phosphatase, dual activity, product, substrate, transferase, hydrolase; 1.95A {Staphylococcus xylosus} SCOP: c.98.2.1 c.91.1.2
Probab=97.73 E-value=2.4e-05 Score=52.72 Aligned_cols=25 Identities=20% Similarity=0.364 Sum_probs=22.6
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhh
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINS 29 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~ 29 (91)
.|+-++|.|+||+||||++..|.+.
T Consensus 143 ~g~~vl~~G~sG~GKSt~a~~l~~~ 167 (314)
T 1ko7_A 143 YGVGVLITGDSGIGKSETALELIKR 167 (314)
T ss_dssp TTEEEEEEESTTSSHHHHHHHHHHT
T ss_pred CCEEEEEEeCCCCCHHHHHHHHHhc
Confidence 4778999999999999999999874
No 394
>1zd9_A ADP-ribosylation factor-like 10B; transport protein, GDP-binding, membrane trafficking, structural genomics, structural genomics consortium, SGC; HET: GDP; 1.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 2al7_A* 2h18_A*
Probab=97.73 E-value=2.3e-05 Score=47.95 Aligned_cols=23 Identities=26% Similarity=0.394 Sum_probs=20.4
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-++|+|++|+|||||+++|....
T Consensus 24 ki~v~G~~~~GKSsli~~l~~~~ 46 (188)
T 1zd9_A 24 ELTLVGLQYSGKTTFVNVIASGQ 46 (188)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHcCC
Confidence 47899999999999999998654
No 395
>2ew1_A RAS-related protein RAB-30; G-protein, GTP analogue, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GNP; 2.00A {Homo sapiens} SCOP: c.37.1.8
Probab=97.73 E-value=2e-05 Score=49.12 Aligned_cols=23 Identities=35% Similarity=0.586 Sum_probs=20.3
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-++|+|++|+|||||+++|....
T Consensus 28 ki~lvG~~~vGKSsLi~~l~~~~ 50 (201)
T 2ew1_A 28 KIVLIGNAGVGKTCLVRRFTQGL 50 (201)
T ss_dssp EEEEEESTTSSHHHHHHHHHHSS
T ss_pred EEEEECcCCCCHHHHHHHHHhCC
Confidence 47899999999999999998654
No 396
>3c5c_A RAS-like protein 12; GDP, GTPase, structural genomics consortium, SGC, limited proteolysis, GTP-binding, nucleotide-binding, signaling protein; HET: GDP; 1.85A {Homo sapiens}
Probab=97.73 E-value=2.3e-05 Score=47.97 Aligned_cols=23 Identities=22% Similarity=0.655 Sum_probs=20.3
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-++|+|++|+|||||+++|....
T Consensus 23 ki~vvG~~~vGKTsLi~~l~~~~ 45 (187)
T 3c5c_A 23 NLAILGRRGAGKSALTVKFLTKR 45 (187)
T ss_dssp EEEEECCTTSSHHHHHHHHHHSS
T ss_pred EEEEECCCCCcHHHHHHHHHhCC
Confidence 48899999999999999998654
No 397
>2bcg_Y Protein YP2, GTP-binding protein YPT1; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 1ukv_Y* 3cue_F* 1yzn_A* 3sfv_A* 2wwx_A 2fol_A* 3nkv_A* 3jza_A* 2rhd_A*
Probab=97.73 E-value=2.1e-05 Score=48.66 Aligned_cols=23 Identities=30% Similarity=0.598 Sum_probs=20.4
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-++|+|++|+|||||++.|....
T Consensus 10 ki~v~G~~~~GKSsli~~l~~~~ 32 (206)
T 2bcg_Y 10 KLLLIGNSGVGKSCLLLRFSDDT 32 (206)
T ss_dssp EEEEEESTTSSHHHHHHHHHHCC
T ss_pred EEEEECCCCCCHHHHHHHHhcCC
Confidence 47899999999999999998754
No 398
>3t34_A Dynamin-related protein 1A, linker, dynamin-relat 1A; dynamin-like protein 1A, GTPase, membrane fission, motor Pro; HET: GDP; 2.40A {Arabidopsis thaliana} PDB: 3t35_A*
Probab=97.72 E-value=1.8e-05 Score=53.52 Aligned_cols=23 Identities=26% Similarity=0.505 Sum_probs=21.1
Q ss_pred cEEEEEcCCCCCHHHHHHHHHhh
Q psy4405 7 KTIALVGCQGVGRRTLKARLINS 29 (91)
Q Consensus 7 ~~i~l~GpsGaGKsTl~~~L~~~ 29 (91)
..++|+|++|||||||+++|++.
T Consensus 35 p~I~vvG~~~sGKSSLln~l~g~ 57 (360)
T 3t34_A 35 PAIAVVGGQSSGKSSVLESIVGK 57 (360)
T ss_dssp CEEEEECBTTSSHHHHHHHHHTS
T ss_pred CEEEEECCCCCcHHHHHHHHhCC
Confidence 37899999999999999999984
No 399
>3ice_A Transcription termination factor RHO; transcription, ATPase, hexamer, helicase, RNA, RECA, OB fold ATP-binding, hydrolase; HET: MSE ADP SPD; 2.80A {Escherichia coli k-12} PDB: 1pv4_A 1pvo_A* 1xpo_A* 1xpr_A* 1xpu_A* 2ht1_A
Probab=97.72 E-value=3e-05 Score=53.99 Aligned_cols=29 Identities=17% Similarity=0.150 Sum_probs=25.0
Q ss_pred CCCCCcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 2 PPLKRKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 2 ~~~~g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
|-.+|..++|+||+|+|||||+++|.+..
T Consensus 170 pi~rGQr~~IvG~sG~GKTtLl~~Iar~i 198 (422)
T 3ice_A 170 PIGRGQRGLIVAPPKAGKTMLLQNIAQSI 198 (422)
T ss_dssp CCBTTCEEEEECCSSSSHHHHHHHHHHHH
T ss_pred eecCCcEEEEecCCCCChhHHHHHHHHHH
Confidence 44578999999999999999999988753
No 400
>3t15_A Ribulose bisphosphate carboxylase/oxygenase activ chloroplastic; photosynthesis, rubisco activase, AAA+ protein; 2.95A {Nicotiana tabacum} PDB: 3zw6_A
Probab=97.72 E-value=2.6e-05 Score=51.52 Aligned_cols=26 Identities=12% Similarity=0.141 Sum_probs=22.3
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
++.+.|.||+|+|||+|++.|+..+.
T Consensus 36 p~~lLl~GppGtGKT~la~aiA~~l~ 61 (293)
T 3t15_A 36 PLILGIWGGKGQGKSFQCELVFRKMG 61 (293)
T ss_dssp CSEEEEEECTTSCHHHHHHHHHHHHT
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHhC
Confidence 35677889999999999999998764
No 401
>2o52_A RAS-related protein RAB-4B; G-protein, GDP, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 2.20A {Homo sapiens}
Probab=97.71 E-value=2e-05 Score=48.74 Aligned_cols=23 Identities=22% Similarity=0.547 Sum_probs=19.3
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-++|+|++|+|||||+++|....
T Consensus 27 ki~v~G~~~~GKSsLi~~l~~~~ 49 (200)
T 2o52_A 27 KFLVIGSAGTGKSCLLHQFIENK 49 (200)
T ss_dssp EEEEEESTTSSHHHHHHHHHC--
T ss_pred EEEEECcCCCCHHHHHHHHHhCC
Confidence 47899999999999999998643
No 402
>1v5w_A DMC1, meiotic recombination protein DMC1/LIM15 homolog; DNA-binding protein, ring protein, octamer, AAA ATPase; 3.20A {Homo sapiens} SCOP: c.37.1.11 PDB: 2zjb_A
Probab=97.71 E-value=2.7e-05 Score=52.63 Aligned_cols=25 Identities=16% Similarity=0.137 Sum_probs=23.1
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhh
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINS 29 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~ 29 (91)
.|+++.|.||+|+|||||+..|+..
T Consensus 121 ~G~i~~I~G~~GsGKTtla~~la~~ 145 (343)
T 1v5w_A 121 SMAITEAFGEFRTGKTQLSHTLCVT 145 (343)
T ss_dssp SSEEEEEECCTTCTHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHH
Confidence 5899999999999999999998875
No 403
>3gmt_A Adenylate kinase; ssgcid, ATP-BIN cytoplasm, nucleotide biosynthesis, nucleotide-BIND transferase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=97.71 E-value=1.8e-05 Score=51.18 Aligned_cols=24 Identities=21% Similarity=0.328 Sum_probs=21.6
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
.++|+||+||||||+++.|+..+.
T Consensus 10 ~~~~~G~pGsGKsT~a~~L~~~~g 33 (230)
T 3gmt_A 10 RLILLGAPGAGKGTQANFIKEKFG 33 (230)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHT
T ss_pred ceeeECCCCCCHHHHHHHHHHHhC
Confidence 579999999999999999998763
No 404
>2atx_A Small GTP binding protein TC10; GTPase, P-loop, alpha-beta, hydrolase; HET: GNP; 2.65A {Homo sapiens} SCOP: c.37.1.8
Probab=97.71 E-value=1.6e-05 Score=48.71 Aligned_cols=23 Identities=26% Similarity=0.341 Sum_probs=20.5
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-++|+|++|+|||||+++|....
T Consensus 20 ki~v~G~~~~GKssli~~l~~~~ 42 (194)
T 2atx_A 20 KCVVVGDGAVGKTCLLMSYANDA 42 (194)
T ss_dssp EEEEEECTTSSHHHHHHHHHHSS
T ss_pred EEEEECCCCCCHHHHHHHHhcCC
Confidence 57899999999999999998653
No 405
>2dhr_A FTSH; AAA+ protein, hexameric Zn metalloprotease, hydrolase; HET: ADP; 3.90A {Thermus thermophilus}
Probab=97.71 E-value=2.2e-05 Score=55.78 Aligned_cols=24 Identities=29% Similarity=0.461 Sum_probs=21.9
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
-+.|+||+|+|||||+++|++...
T Consensus 66 GvLL~GppGtGKTtLaraIa~~~~ 89 (499)
T 2dhr_A 66 GVLLVGPPGVGKTHLARAVAGEAR 89 (499)
T ss_dssp EEEEECSSSSSHHHHHHHHHHHTT
T ss_pred eEEEECCCCCCHHHHHHHHHHHhC
Confidence 389999999999999999998875
No 406
>1xwi_A SKD1 protein; VPS4B, AAA ATPase, protein transport; 2.80A {Homo sapiens}
Probab=97.71 E-value=3e-05 Score=51.88 Aligned_cols=25 Identities=24% Similarity=0.375 Sum_probs=22.7
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
++-+.|.||+|+|||+|++.|+...
T Consensus 45 ~~~iLL~GppGtGKT~la~ala~~~ 69 (322)
T 1xwi_A 45 WRGILLFGPPGTGKSYLAKAVATEA 69 (322)
T ss_dssp CSEEEEESSSSSCHHHHHHHHHHHT
T ss_pred CceEEEECCCCccHHHHHHHHHHHc
Confidence 4678999999999999999999876
No 407
>4b4t_H 26S protease regulatory subunit 7 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.71 E-value=5.9e-05 Score=53.26 Aligned_cols=26 Identities=27% Similarity=0.333 Sum_probs=22.9
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
++=+.|.||+|+|||+|+++|+....
T Consensus 243 prGILLyGPPGTGKTlLAkAiA~e~~ 268 (467)
T 4b4t_H 243 PKGILLYGPPGTGKTLCARAVANRTD 268 (467)
T ss_dssp CSEEEECSCTTSSHHHHHHHHHHHHT
T ss_pred CCceEeeCCCCCcHHHHHHHHHhccC
Confidence 45688999999999999999998764
No 408
>3reg_A RHO-like small GTPase; cytoskeleton, nucleotide-binding, GTP-binding, signaling Pro lipoprotein, prenylation; HET: GSP; 1.80A {Entamoeba histolytica} PDB: 3ref_B* 4dvg_A*
Probab=97.71 E-value=2.5e-05 Score=47.82 Aligned_cols=23 Identities=26% Similarity=0.388 Sum_probs=20.6
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-++|+|++|+|||||+++|.+..
T Consensus 25 ki~~vG~~~~GKSsl~~~l~~~~ 47 (194)
T 3reg_A 25 KIVVVGDGAVGKTCLLLAFSKGE 47 (194)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEEECcCCCCHHHHHHHHhcCC
Confidence 47899999999999999998754
No 409
>1zj6_A ADP-ribosylation factor-like protein 5; ARL, GTP-binding, transport protein; HET: G3D; 2.00A {Homo sapiens} SCOP: c.37.1.8
Probab=97.71 E-value=2.3e-05 Score=47.74 Aligned_cols=24 Identities=17% Similarity=0.378 Sum_probs=20.8
Q ss_pred cEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 7 KTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 7 ~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
--++|+|++|+|||||+++|....
T Consensus 17 ~~i~v~G~~~~GKssl~~~l~~~~ 40 (187)
T 1zj6_A 17 HKVIIVGLDNAGKTTILYQFSMNE 40 (187)
T ss_dssp EEEEEEESTTSSHHHHHHHHHTTS
T ss_pred cEEEEECCCCCCHHHHHHHHhcCC
Confidence 358999999999999999998543
No 410
>2qag_A Septin-2, protein NEDD5; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens}
Probab=97.70 E-value=1.6e-05 Score=54.14 Aligned_cols=22 Identities=32% Similarity=0.579 Sum_probs=19.5
Q ss_pred EEEEcCCCCCHHHHHHHHHhhC
Q psy4405 9 IALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 9 i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
++|+|++|+|||||++.|....
T Consensus 40 I~vvG~~g~GKSTLln~L~~~~ 61 (361)
T 2qag_A 40 LMVVGESGLGKSTLINSLFLTD 61 (361)
T ss_dssp EEECCCTTSCHHHHHHHHTTCC
T ss_pred EEEEcCCCCCHHHHHHHHhCCC
Confidence 6899999999999999987653
No 411
>2fh5_B SR-beta, signal recognition particle receptor beta subunit; endomembrane targeting, GTPase, GAP, longin domain, SEDL, transport protein; HET: GTP; 2.45A {Mus musculus} SCOP: c.37.1.8 PDB: 2go5_2
Probab=97.70 E-value=2.5e-05 Score=48.51 Aligned_cols=24 Identities=25% Similarity=0.475 Sum_probs=21.0
Q ss_pred cEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 7 KTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 7 ~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
..++|+|++|+|||||+++|....
T Consensus 8 ~ki~vvG~~~~GKTsli~~l~~~~ 31 (214)
T 2fh5_B 8 RAVLFVGLCDSGKTLLFVRLLTGQ 31 (214)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHSC
T ss_pred CEEEEECCCCCCHHHHHHHHhCCC
Confidence 368899999999999999998654
No 412
>3pih_A Uvrabc system protein A; hydrolase, ABC ATPase, DNA repair, nucleotide excision repai hydrolase-DNA complex; HET: DNA; 2.90A {Thermotoga maritima}
Probab=97.70 E-value=1.9e-05 Score=59.70 Aligned_cols=19 Identities=21% Similarity=0.417 Sum_probs=18.0
Q ss_pred CCcEEEEEcCCCCCHHHHH
Q psy4405 5 KRKTIALVGCQGVGRRTLK 23 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~ 23 (91)
.|++++|+||||||||||+
T Consensus 609 ~Geiv~I~G~SGSGKSTLl 627 (916)
T 3pih_A 609 LGVFVCVTGVSGSGKSSLV 627 (916)
T ss_dssp SSSEEEEECSTTSSHHHHH
T ss_pred CCcEEEEEccCCCChhhhH
Confidence 5899999999999999997
No 413
>1gwn_A RHO-related GTP-binding protein RHOE; GTPase, inactive GTPase, signal transduction; HET: GTP; 2.1A {Mus musculus} SCOP: c.37.1.8
Probab=97.70 E-value=2.4e-05 Score=48.91 Aligned_cols=23 Identities=22% Similarity=0.313 Sum_probs=20.6
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-++|+|++|+|||||+++|....
T Consensus 30 ki~vvG~~~vGKSsLi~~l~~~~ 52 (205)
T 1gwn_A 30 KIVVVGDSQCGKTALLHVFAKDC 52 (205)
T ss_dssp EEEEEESTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHhcCC
Confidence 48899999999999999998754
No 414
>2il1_A RAB12; G-protein, GDP, GTPase, predicted, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 2.10A {Homo sapiens}
Probab=97.70 E-value=1.9e-05 Score=48.54 Aligned_cols=23 Identities=26% Similarity=0.709 Sum_probs=19.2
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-++|+|++|+|||||++.|.+..
T Consensus 28 ki~vvG~~~~GKSsLi~~l~~~~ 50 (192)
T 2il1_A 28 QVIIIGSRGVGKTSLMERFTDDT 50 (192)
T ss_dssp EEEEECSTTSSHHHHHHHHCC--
T ss_pred EEEEECCCCCCHHHHHHHHhcCC
Confidence 37899999999999999997643
No 415
>3fdi_A Uncharacterized protein; cytidylate kinase like protein, PSI, MCSG, PRK04182 class ME structural genomics, protein structure initiative; 2.20A {Eubacterium ventriosum}
Probab=97.70 E-value=3.2e-05 Score=48.67 Aligned_cols=26 Identities=19% Similarity=0.180 Sum_probs=23.6
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
..+|.|.|+.||||||+.+.|++.+.
T Consensus 6 ~~iI~i~g~~GsGk~ti~~~la~~lg 31 (201)
T 3fdi_A 6 QIIIAIGREFGSGGHLVAKKLAEHYN 31 (201)
T ss_dssp CCEEEEEECTTSSHHHHHHHHHHHTT
T ss_pred CeEEEEeCCCCCCHHHHHHHHHHHhC
Confidence 35899999999999999999999874
No 416
>3iby_A Ferrous iron transport protein B; G protein, G domain, iron uptake, cell inner membrane, cell GTP-binding, ION transport, membrane; 2.50A {Legionella pneumophila}
Probab=97.69 E-value=2.7e-05 Score=50.66 Aligned_cols=23 Identities=35% Similarity=0.484 Sum_probs=21.0
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
.++|+|.+|||||||+++|.+..
T Consensus 3 kI~lvG~~n~GKSTL~n~L~g~~ 25 (256)
T 3iby_A 3 HALLIGNPNCGKTTLFNALTNAN 25 (256)
T ss_dssp EEEEEESTTSSHHHHHHHHHTTS
T ss_pred EEEEECCCCCCHHHHHHHHHCCC
Confidence 58999999999999999998764
No 417
>3cph_A RAS-related protein SEC4; RAB GTPase, prenylation, vesicular transport, cytoplasm, cytoplasmic vesicle, exocytosis, GTP-binding; HET: GDP; 2.90A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=97.69 E-value=2.7e-05 Score=48.15 Aligned_cols=24 Identities=33% Similarity=0.623 Sum_probs=20.8
Q ss_pred cEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 7 KTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 7 ~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
--++|+|++|+|||||++.|....
T Consensus 21 ~~i~v~G~~~~GKSsli~~l~~~~ 44 (213)
T 3cph_A 21 MKILLIGDSGVGKSCLLVRFVEDK 44 (213)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHCC
T ss_pred eEEEEECCCCCCHHHHHHHHHhCC
Confidence 358999999999999999998654
No 418
>3llm_A ATP-dependent RNA helicase A; alpha-beta-alpha, structural genomics, structural genomics consortium, SGC, activator, ATP-binding, DNA-binding; HET: ADP; 2.80A {Homo sapiens}
Probab=97.69 E-value=3.1e-05 Score=49.35 Aligned_cols=23 Identities=22% Similarity=0.505 Sum_probs=19.3
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHH
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLI 27 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~ 27 (91)
.|+.+++.||+||||||++..++
T Consensus 75 ~g~~~~i~g~TGsGKTt~~~~~~ 97 (235)
T 3llm_A 75 QNSVVIIRGATGCGKTTQVPQFI 97 (235)
T ss_dssp HCSEEEEECCTTSSHHHHHHHHH
T ss_pred cCCEEEEEeCCCCCcHHhHHHHH
Confidence 47889999999999999776553
No 419
>2e87_A Hypothetical protein PH1320; GTP-binding, GTPase, OBG, bundle, GDP, complex, structural G NPPSFA; HET: GDP; 2.35A {Pyrococcus horikoshii}
Probab=97.69 E-value=2.3e-05 Score=53.07 Aligned_cols=25 Identities=28% Similarity=0.438 Sum_probs=22.3
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
...++|+|++|+|||||++.|++..
T Consensus 167 ~~~v~lvG~~gvGKSTLin~L~~~~ 191 (357)
T 2e87_A 167 IPTVVIAGHPNVGKSTLLKALTTAK 191 (357)
T ss_dssp SCEEEEECSTTSSHHHHHHHHCSSC
T ss_pred CCEEEEECCCCCCHHHHHHHHhCCC
Confidence 4578999999999999999998765
No 420
>2chg_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATPase, ATP-binding, nucleotide-binding; HET: ANP; 2.1A {Archaeoglobus fulgidus}
Probab=97.69 E-value=3e-05 Score=47.76 Aligned_cols=23 Identities=17% Similarity=0.288 Sum_probs=20.6
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
.+.|.||+|+|||++++.+...+
T Consensus 40 ~~ll~G~~G~GKT~l~~~l~~~~ 62 (226)
T 2chg_A 40 HLLFSGPPGTGKTATAIALARDL 62 (226)
T ss_dssp CEEEECSTTSSHHHHHHHHHHHH
T ss_pred eEEEECCCCCCHHHHHHHHHHHH
Confidence 48999999999999999998764
No 421
>2j0v_A RAC-like GTP-binding protein ARAC7; nucleotide-binding protein, ROP9, atrac7, membrane, palmitate, RHO GTPase; HET: GDP; 1.78A {Arabidopsis thaliana}
Probab=97.69 E-value=3.6e-05 Score=47.74 Aligned_cols=24 Identities=17% Similarity=0.192 Sum_probs=20.8
Q ss_pred cEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 7 KTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 7 ~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
--++|+|++|+|||||+++|....
T Consensus 10 ~ki~i~G~~~~GKTsli~~l~~~~ 33 (212)
T 2j0v_A 10 IKCVTVGDGAVGKTCMLICYTSNK 33 (212)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHSC
T ss_pred EEEEEECCCCCCHHHHHHHHhcCC
Confidence 358999999999999999998654
No 422
>3cbq_A GTP-binding protein REM 2; FLJ38964A, structural genomics consortium, SGC, GDP, membrane, nucleotide-binding, nucleotide binding protein; HET: GDP; 1.82A {Homo sapiens}
Probab=97.69 E-value=2e-05 Score=48.81 Aligned_cols=22 Identities=36% Similarity=0.531 Sum_probs=19.5
Q ss_pred EEEEEcCCCCCHHHHHHHHHhh
Q psy4405 8 TIALVGCQGVGRRTLKARLINS 29 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~ 29 (91)
-++|+|++|+|||||+++|.+.
T Consensus 25 ki~vvG~~~vGKSsLi~~l~~~ 46 (195)
T 3cbq_A 25 KVMLVGESGVGKSTLAGTFGGL 46 (195)
T ss_dssp EEEEECSTTSSHHHHHHHTCCE
T ss_pred EEEEECCCCCCHHHHHHHHHhc
Confidence 5799999999999999999643
No 423
>2f7s_A C25KG, RAS-related protein RAB-27B; G-protein, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GDP; 2.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 2iez_A*
Probab=97.68 E-value=2.7e-05 Score=48.49 Aligned_cols=23 Identities=26% Similarity=0.482 Sum_probs=20.3
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-++|+|++|+|||||+++|....
T Consensus 27 ki~vvG~~~~GKSsLi~~l~~~~ 49 (217)
T 2f7s_A 27 KLLALGDSGVGKTTFLYRYTDNK 49 (217)
T ss_dssp EEEEESCTTSSHHHHHHHHHCSC
T ss_pred EEEEECcCCCCHHHHHHHHhcCC
Confidence 47899999999999999998653
No 424
>2h17_A ADP-ribosylation factor-like protein 5A; GDP, GTPase, membrane trafficking, structural genomics consortium, SGC, transport protein; HET: GDP; 1.70A {Homo sapiens} PDB: 2h16_A* 1z6y_A* 1yzg_A*
Probab=97.68 E-value=2.5e-05 Score=47.40 Aligned_cols=24 Identities=17% Similarity=0.378 Sum_probs=21.0
Q ss_pred cEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 7 KTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 7 ~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
--++|+|++|+|||||+++|....
T Consensus 22 ~~i~v~G~~~~GKSsli~~l~~~~ 45 (181)
T 2h17_A 22 HKVIIVGLDNAGKTTILYQFSMNE 45 (181)
T ss_dssp EEEEEEEETTSSHHHHHHHHHTTS
T ss_pred eEEEEECCCCCCHHHHHHHHhcCC
Confidence 358999999999999999998654
No 425
>2fv8_A H6, RHO-related GTP-binding protein RHOB; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8
Probab=97.68 E-value=2.7e-05 Score=48.36 Aligned_cols=23 Identities=17% Similarity=0.309 Sum_probs=20.6
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-++|+|++|+|||||++.|.+..
T Consensus 27 ki~vvG~~~~GKSsli~~l~~~~ 49 (207)
T 2fv8_A 27 KLVVVGDGACGKTCLLIVFSKDE 49 (207)
T ss_dssp EEEEEECTTSSHHHHHHHHHHSS
T ss_pred EEEEECcCCCCHHHHHHHHhcCC
Confidence 58899999999999999998754
No 426
>3llu_A RAS-related GTP-binding protein C; structural genomics consortium, SGC, cytoplasm, nucleotide-binding, nucleus, phosphoprotein; HET: GNP; 1.40A {Homo sapiens} PDB: 2q3f_A*
Probab=97.68 E-value=3.2e-05 Score=47.60 Aligned_cols=24 Identities=17% Similarity=0.385 Sum_probs=21.3
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
-++|+|++|+|||||++.|.+.+.
T Consensus 22 ki~~vG~~~vGKTsLi~~l~~~~~ 45 (196)
T 3llu_A 22 RILLMGLRRSGKSSIQKVVFHKMS 45 (196)
T ss_dssp EEEEEESTTSSHHHHHHHHHSCCC
T ss_pred EEEEECCCCCCHHHHHHHHHhcCC
Confidence 589999999999999999887654
No 427
>2z4s_A Chromosomal replication initiator protein DNAA; AAA+ ATPase, domain III (ATPase domain), ATP-binding, cytoplasm, DNA replication; HET: ADP; 3.00A {Thermotoga maritima} PDB: 2z4r_A*
Probab=97.68 E-value=2.9e-05 Score=54.07 Aligned_cols=25 Identities=20% Similarity=0.283 Sum_probs=22.2
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
+..+.|.||+|+|||||++.|....
T Consensus 130 ~~~lll~Gp~G~GKTtLa~aia~~l 154 (440)
T 2z4s_A 130 YNPLFIYGGVGLGKTHLLQSIGNYV 154 (440)
T ss_dssp SCCEEEECSSSSSHHHHHHHHHHHH
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHH
Confidence 4679999999999999999998765
No 428
>2qgz_A Helicase loader, putative primosome component; structural genomics, PSI-2, protein structure initiative; 2.40A {Streptococcus pyogenes serotype M3}
Probab=97.68 E-value=4.1e-05 Score=51.08 Aligned_cols=25 Identities=28% Similarity=0.408 Sum_probs=22.2
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
++.+.|.||+|+|||+|+++|....
T Consensus 152 ~~~lll~G~~GtGKT~La~aia~~~ 176 (308)
T 2qgz_A 152 QKGLYLYGDMGIGKSYLLAAMAHEL 176 (308)
T ss_dssp CCEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CceEEEECCCCCCHHHHHHHHHHHH
Confidence 5789999999999999999988654
No 429
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=97.67 E-value=2.6e-05 Score=54.73 Aligned_cols=27 Identities=33% Similarity=0.438 Sum_probs=23.5
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
++.+++++|++|+||||++..|+..+.
T Consensus 99 ~p~vIlivG~~G~GKTTt~~kLA~~l~ 125 (443)
T 3dm5_A 99 KPTILLMVGIQGSGKTTTVAKLARYFQ 125 (443)
T ss_dssp SSEEEEEECCTTSSHHHHHHHHHHHHH
T ss_pred CCeEEEEECcCCCCHHHHHHHHHHHHH
Confidence 367999999999999999999987653
No 430
>1ofh_A ATP-dependent HSL protease ATP-binding subunit HSLU; chaperone, hydrolase, ATP-binding; HET: ADP; 2.5A {Haemophilus influenzae} SCOP: c.37.1.20 PDB: 1ofi_A*
Probab=97.67 E-value=3.1e-05 Score=50.51 Aligned_cols=26 Identities=31% Similarity=0.529 Sum_probs=23.0
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
+..+.|.||+|+|||++++.|...+.
T Consensus 50 ~~~vll~G~~GtGKT~la~~la~~l~ 75 (310)
T 1ofh_A 50 PKNILMIGPTGVGKTEIARRLAKLAN 75 (310)
T ss_dssp CCCEEEECCTTSSHHHHHHHHHHHHT
T ss_pred CceEEEECCCCCCHHHHHHHHHHHhC
Confidence 45788999999999999999998764
No 431
>2orw_A Thymidine kinase; TMTK, TP4A, transferase; HET: 4TA; 1.50A {Thermotoga maritima} PDB: 2qpo_A 2qq0_A* 2qqe_A*
Probab=97.67 E-value=2.8e-05 Score=48.32 Aligned_cols=25 Identities=16% Similarity=0.139 Sum_probs=20.6
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhh
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINS 29 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~ 29 (91)
+|+++++.||.|+||||++..++..
T Consensus 2 ~g~i~vi~G~~gsGKTT~ll~~~~~ 26 (184)
T 2orw_A 2 SGKLTVITGPMYSGKTTELLSFVEI 26 (184)
T ss_dssp CCCEEEEEESTTSSHHHHHHHHHHH
T ss_pred ccEEEEEECCCCCCHHHHHHHHHHH
Confidence 3789999999999999998655543
No 432
>1d2n_A N-ethylmaleimide-sensitive fusion protein; hexamerization domain, ATPase, transport; HET: ANP; 1.75A {Cricetulus griseus} SCOP: c.37.1.20 PDB: 1nsf_A*
Probab=97.67 E-value=3.1e-05 Score=50.24 Aligned_cols=26 Identities=19% Similarity=0.309 Sum_probs=22.6
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
...+.|.||+|+|||+|++.|.....
T Consensus 64 ~~~vLl~G~~GtGKT~la~~ia~~~~ 89 (272)
T 1d2n_A 64 LVSVLLEGPPHSGKTALAAKIAEESN 89 (272)
T ss_dssp EEEEEEECSTTSSHHHHHHHHHHHHT
T ss_pred CeEEEEECCCCCcHHHHHHHHHHHhC
Confidence 45788999999999999999998753
No 433
>2axn_A 6-phosphofructo-2-kinase/fructose-2,6- biphosphatase 3 (6PF-2-K/FRU- 2,6-P2ASE brain/placenta-type...; bifunctional enzyme, EDTA complex; HET: F6P EDT ADP; 2.10A {Homo sapiens} PDB: 2dwo_A* 2dwp_A* 2i1v_B* 3qpu_A* 3qpv_A* 3qpw_A*
Probab=97.67 E-value=2.6e-05 Score=55.51 Aligned_cols=26 Identities=19% Similarity=0.312 Sum_probs=22.7
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
.+.+|+++|.+||||||+++.|...+
T Consensus 34 ~~~lIvlvGlpGSGKSTia~~La~~L 59 (520)
T 2axn_A 34 SPTVIVMVGLPARGKTYISKKLTRYL 59 (520)
T ss_dssp CCEEEEEECCTTSSHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHH
Confidence 34588999999999999999998765
No 434
>3uk6_A RUVB-like 2; hexameric AAA+ ATP-ASE, DNA unwinding, hydrolase; HET: ADP; 2.95A {Homo sapiens} PDB: 2xsz_D*
Probab=97.67 E-value=3.2e-05 Score=51.87 Aligned_cols=26 Identities=12% Similarity=0.351 Sum_probs=23.4
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
++.+.|.||+|+|||++++.+...+.
T Consensus 70 ~~~vLl~GppGtGKT~la~~la~~l~ 95 (368)
T 3uk6_A 70 GRAVLIAGQPGTGKTAIAMGMAQALG 95 (368)
T ss_dssp TCEEEEEESTTSSHHHHHHHHHHHHC
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHhc
Confidence 56899999999999999999998764
No 435
>3t5d_A Septin-7; GTP-binding protein, cytoskeleton, signaling protein; HET: GDP; 3.30A {Homo sapiens} PDB: 3tw4_A*
Probab=97.67 E-value=2.1e-05 Score=51.34 Aligned_cols=23 Identities=35% Similarity=0.590 Sum_probs=20.0
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-++|+|.+|+|||||++.|....
T Consensus 10 ~I~vvG~~g~GKSTLin~L~~~~ 32 (274)
T 3t5d_A 10 TLMVVGESGLGKSTLINSLFLTD 32 (274)
T ss_dssp EEEEEECTTSSHHHHHHHHSSSC
T ss_pred EEEEECCCCCCHHHHHHHHhCCC
Confidence 47899999999999999987544
No 436
>2h57_A ADP-ribosylation factor-like protein 6; GTP, GTPase, membrane trafficking, structural genomics consortium, SGC, transport protein; HET: GTP; 2.00A {Homo sapiens}
Probab=97.66 E-value=1.8e-05 Score=48.32 Aligned_cols=23 Identities=26% Similarity=0.421 Sum_probs=20.5
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-++|+|++|+|||||+++|.+..
T Consensus 23 ki~v~G~~~~GKSsli~~l~~~~ 45 (190)
T 2h57_A 23 HVLCLGLDNSGKTTIINKLKPSN 45 (190)
T ss_dssp EEEEEECTTSSHHHHHHHTSCGG
T ss_pred EEEEECCCCCCHHHHHHHHhcCC
Confidence 58899999999999999997654
No 437
>2ohf_A Protein OLA1, GTP-binding protein 9; ATPase, GTPase, P-loop, OBG-like, hydrolase; HET: ACP; 2.70A {Homo sapiens}
Probab=97.65 E-value=2.9e-05 Score=53.83 Aligned_cols=24 Identities=38% Similarity=0.481 Sum_probs=21.0
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhh
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINS 29 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~ 29 (91)
+..++|+|++|+|||||+++|++.
T Consensus 22 ~~kvgIVG~pnvGKSTL~n~Ltg~ 45 (396)
T 2ohf_A 22 SLKIGIVGLPNVGKSTFFNVLTNS 45 (396)
T ss_dssp CCCEEEECCSSSSHHHHHHHHHC-
T ss_pred CCEEEEECCCCCCHHHHHHHHHCC
Confidence 456899999999999999999876
No 438
>2j1l_A RHO-related GTP-binding protein RHOD; GTPase, membrane, prenylation, hydrolase, nucleotide-binding, methylation, lipoprotein, endosome DYNA; HET: GDP; 2.5A {Homo sapiens}
Probab=97.65 E-value=2.9e-05 Score=48.55 Aligned_cols=22 Identities=27% Similarity=0.505 Sum_probs=19.4
Q ss_pred EEEEEcCCCCCHHHHHHHHHhh
Q psy4405 8 TIALVGCQGVGRRTLKARLINS 29 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~ 29 (91)
-++|+|++|+|||||+++|...
T Consensus 36 ki~vvG~~~vGKSsli~~l~~~ 57 (214)
T 2j1l_A 36 KVVLVGDGGCGKTSLLMVFADG 57 (214)
T ss_dssp EEEEEECTTSSHHHHHHHHHC-
T ss_pred EEEEECcCCCCHHHHHHHHHcC
Confidence 4889999999999999999864
No 439
>4b4t_I 26S protease regulatory subunit 4 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.65 E-value=9.5e-05 Score=51.84 Aligned_cols=26 Identities=27% Similarity=0.465 Sum_probs=22.8
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
++=+.|.||+|+|||.|+++|+....
T Consensus 216 prGvLLyGPPGTGKTlLAkAiA~e~~ 241 (437)
T 4b4t_I 216 PKGVILYGAPGTGKTLLAKAVANQTS 241 (437)
T ss_dssp CSEEEEESSTTTTHHHHHHHHHHHHT
T ss_pred CCCCceECCCCchHHHHHHHHHHHhC
Confidence 45688999999999999999998764
No 440
>2v1u_A Cell division control protein 6 homolog; DNA replication, nucleotide-binding, replication, archaea; HET: ADP; 3.10A {Aeropyrum pernix}
Probab=97.64 E-value=2.9e-05 Score=51.91 Aligned_cols=26 Identities=19% Similarity=0.328 Sum_probs=22.9
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
.+..+.|.||+|+||||+++.+....
T Consensus 43 ~~~~vll~G~~G~GKT~l~~~~~~~~ 68 (387)
T 2v1u_A 43 KPSNALLYGLTGTGKTAVARLVLRRL 68 (387)
T ss_dssp CCCCEEECBCTTSSHHHHHHHHHHHH
T ss_pred CCCcEEEECCCCCCHHHHHHHHHHHH
Confidence 45679999999999999999998765
No 441
>4ag6_A VIRB4 ATPase, type IV secretory pathway VIRB4 components-like P; hydrolase, type IV secretion, conjugation; 2.35A {Thermoanaerobacter pseudethanolicus} PDB: 4ag5_A
Probab=97.64 E-value=3.5e-05 Score=52.54 Aligned_cols=25 Identities=12% Similarity=0.217 Sum_probs=21.6
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
+.-++|+||+||||||+++.|+...
T Consensus 35 ~~~~~i~G~~G~GKs~~~~~~~~~~ 59 (392)
T 4ag6_A 35 NSNWTILAKPGAGKSFTAKMLLLRE 59 (392)
T ss_dssp CCCEEEECCTTSSHHHHHHHHHHHH
T ss_pred cCceEEEcCCCCCHHHHHHHHHHHH
Confidence 4467899999999999999988765
No 442
>3d8b_A Fidgetin-like protein 1; AAA+, ATPase, ADP, SGC, structural genomics consortium, ATP- hydrolase, magnesium, metal-binding, nucleotide-binding; HET: ADP; 2.00A {Homo sapiens}
Probab=97.64 E-value=4.6e-05 Score=51.59 Aligned_cols=26 Identities=23% Similarity=0.351 Sum_probs=23.4
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
.+.+.|.||+|+|||+|++.|+....
T Consensus 117 ~~~vLl~GppGtGKT~la~aia~~~~ 142 (357)
T 3d8b_A 117 PKGILLFGPPGTGKTLIGKCIASQSG 142 (357)
T ss_dssp CSEEEEESSTTSSHHHHHHHHHHHTT
T ss_pred CceEEEECCCCCCHHHHHHHHHHHcC
Confidence 56789999999999999999998874
No 443
>2q3h_A RAS homolog gene family, member U; GTPase, structural genomics, structural genomics consortium,; HET: GDP; 1.73A {Homo sapiens}
Probab=97.63 E-value=4.2e-05 Score=47.02 Aligned_cols=24 Identities=25% Similarity=0.350 Sum_probs=19.7
Q ss_pred cEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 7 KTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 7 ~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
--++|+|++|+|||||++.|....
T Consensus 21 ~ki~~~G~~~~GKssl~~~l~~~~ 44 (201)
T 2q3h_A 21 VKCVLVGDGAVGKTSLVVSYTTNG 44 (201)
T ss_dssp EEEEEECSTTSSHHHHHHHHHC--
T ss_pred eEEEEECCCCCCHHHHHHHHHhCC
Confidence 358899999999999999998643
No 444
>1um8_A ATP-dependent CLP protease ATP-binding subunit CL; CLPP binding loop, chaperone; HET: ADP; 2.60A {Helicobacter pylori} SCOP: c.37.1.20
Probab=97.62 E-value=4.1e-05 Score=51.87 Aligned_cols=26 Identities=23% Similarity=0.414 Sum_probs=23.1
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
...+.|.||+|+|||++++.|+..+.
T Consensus 72 ~~~ill~Gp~GtGKT~la~~la~~l~ 97 (376)
T 1um8_A 72 KSNILLIGPTGSGKTLMAQTLAKHLD 97 (376)
T ss_dssp CCCEEEECCTTSSHHHHHHHHHHHTT
T ss_pred CCCEEEECCCCCCHHHHHHHHHHHhC
Confidence 34688999999999999999999874
No 445
>3a1s_A Iron(II) transport protein B; FEOB, iron transporter, small GTPase, G protein, GDI; HET: GDP; 1.50A {Thermotoga maritima} PDB: 3a1t_A* 3a1u_A* 3a1v_A* 3a1w_A
Probab=97.62 E-value=3.8e-05 Score=49.97 Aligned_cols=23 Identities=35% Similarity=0.694 Sum_probs=20.8
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
.++|+|++|+|||||+++|++..
T Consensus 7 kI~lvG~~nvGKTsL~n~l~g~~ 29 (258)
T 3a1s_A 7 KVALAGCPNVGKTSLFNALTGTK 29 (258)
T ss_dssp EEEEECCTTSSHHHHHHHHHTTC
T ss_pred EEEEECCCCCCHHHHHHHHHCCC
Confidence 58999999999999999998754
No 446
>2fu5_C RAS-related protein RAB-8A; MSS4:RAB8 protein complex, GEF:GTPase nucleotide free complex; 2.00A {Mus musculus} SCOP: c.37.1.8 PDB: 3qbt_A* 3tnf_A*
Probab=97.62 E-value=1.8e-05 Score=47.88 Aligned_cols=23 Identities=26% Similarity=0.499 Sum_probs=9.1
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-++|+|++|+|||||+++|....
T Consensus 10 ki~v~G~~~~GKssl~~~l~~~~ 32 (183)
T 2fu5_C 10 KLLLIGDSGVGKTCVLFRFSEDA 32 (183)
T ss_dssp EEEEECCCCC-------------
T ss_pred EEEEECCCCCCHHHHHHHHHhCC
Confidence 48899999999999999997543
No 447
>3pfi_A Holliday junction ATP-dependent DNA helicase RUVB; probable holliday junction DNA helicase; HET: ADP; 2.69A {Campylobacter jejuni subsp}
Probab=97.62 E-value=5.7e-05 Score=50.19 Aligned_cols=26 Identities=23% Similarity=0.337 Sum_probs=22.9
Q ss_pred cEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 7 KTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 7 ~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
..+.|.||+|+|||++++.|+.....
T Consensus 56 ~~vll~G~~GtGKT~la~~ia~~~~~ 81 (338)
T 3pfi_A 56 DHILFSGPAGLGKTTLANIISYEMSA 81 (338)
T ss_dssp CCEEEECSTTSSHHHHHHHHHHHTTC
T ss_pred CeEEEECcCCCCHHHHHHHHHHHhCC
Confidence 46889999999999999999988753
No 448
>2dby_A GTP-binding protein; GDP, structural genomics, NPPSFA, natio project on protein structural and functional analyses; HET: GDP; 1.76A {Thermus thermophilus} PDB: 2dwq_A
Probab=97.62 E-value=3.7e-05 Score=52.71 Aligned_cols=23 Identities=35% Similarity=0.567 Sum_probs=20.7
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
.++|+|++|+|||||+++|++..
T Consensus 3 ~v~IVG~pnvGKSTL~n~L~~~~ 25 (368)
T 2dby_A 3 AVGIVGLPNVGKSTLFNALTRAN 25 (368)
T ss_dssp SEEEECCSSSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhCCC
Confidence 47899999999999999999864
No 449
>2gco_A H9, RHO-related GTP-binding protein RHOC; GTPase,signaling protein, signaling Pro; HET: GNP; 1.40A {Homo sapiens} PDB: 2gcn_A* 2gcp_A* 1z2c_A* 1x86_B 2rgn_C* 1lb1_B 1s1c_A* 3kz1_E* 3lxr_A* 3lwn_A* 3lw8_A* 1cxz_A* 1a2b_A* 1ow3_B* 1ftn_A* 1cc0_A* 3msx_A* 1xcg_B 3t06_B 1tx4_B* ...
Probab=97.61 E-value=3.8e-05 Score=47.46 Aligned_cols=23 Identities=17% Similarity=0.320 Sum_probs=20.5
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-++|+|++|+|||||+++|....
T Consensus 27 ki~vvG~~~~GKSsli~~l~~~~ 49 (201)
T 2gco_A 27 KLVIVGDGACGKTCLLIVFSKDQ 49 (201)
T ss_dssp EEEEEESTTSSHHHHHHHHHHSS
T ss_pred EEEEECCCCCCHHHHHHHHHhCc
Confidence 47899999999999999998754
No 450
>2ce7_A Cell division protein FTSH; metalloprotease; HET: ADP; 2.44A {Thermotoga maritima} SCOP: a.269.1.1 c.37.1.20 PDB: 2cea_A* 3kds_E*
Probab=97.61 E-value=4.4e-05 Score=53.95 Aligned_cols=25 Identities=32% Similarity=0.438 Sum_probs=22.1
Q ss_pred cEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 7 KTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 7 ~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
+-+.|+||+|+|||+|+++|++...
T Consensus 50 ~gvLL~GppGtGKT~Laraia~~~~ 74 (476)
T 2ce7_A 50 KGILLVGPPGTGKTLLARAVAGEAN 74 (476)
T ss_dssp SEEEEECCTTSSHHHHHHHHHHHHT
T ss_pred CeEEEECCCCCCHHHHHHHHHHHcC
Confidence 4588999999999999999998764
No 451
>2dy1_A Elongation factor G; translocation, GTP complex, structural genomics, NPPSFA; HET: GTP; 1.60A {Thermus thermophilus} SCOP: b.43.3.1 c.37.1.8 d.14.1.1 d.58.11.1 d.58.11.1 PDB: 1wdt_A*
Probab=97.61 E-value=4.2e-05 Score=55.86 Aligned_cols=27 Identities=37% Similarity=0.555 Sum_probs=24.1
Q ss_pred CCCcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 4 LKRKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 4 ~~g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
.+++.++|+|++|+|||||+++|+...
T Consensus 7 ~~~~~i~IiG~~gaGKTTLl~~L~~~~ 33 (665)
T 2dy1_A 7 AMIRTVALVGHAGSGKTTLTEALLYKT 33 (665)
T ss_dssp CCEEEEEEEESTTSSHHHHHHHHHHHT
T ss_pred CCCcEEEEECCCCChHHHHHHHHHHhc
Confidence 357899999999999999999999665
No 452
>2hup_A RAS-related protein RAB-43; G-protein, GDP, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GDP; 2.05A {Homo sapiens}
Probab=97.60 E-value=4.1e-05 Score=47.43 Aligned_cols=23 Identities=26% Similarity=0.452 Sum_probs=20.3
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-++|+|++|+|||||+++|....
T Consensus 31 ki~vvG~~~vGKSsli~~l~~~~ 53 (201)
T 2hup_A 31 KLVLVGDASVGKTCVVQRFKTGA 53 (201)
T ss_dssp EEEEEECTTSSHHHHHHHHHHSC
T ss_pred EEEEECcCCCCHHHHHHHHhhCC
Confidence 47899999999999999998654
No 453
>3cpj_B GTP-binding protein YPT31/YPT8; RAB GTPase, prenylation, vesicular transport, acetylation, golgi apparatus, lipoprotein, membrane; HET: GDP; 2.35A {Saccharomyces cerevisiae}
Probab=97.60 E-value=4.4e-05 Score=47.93 Aligned_cols=23 Identities=35% Similarity=0.670 Sum_probs=20.5
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-++|+|++|+|||||++.|....
T Consensus 15 ki~v~G~~~vGKSsli~~l~~~~ 37 (223)
T 3cpj_B 15 KIVLIGDSGVGKSNLLSRFTKNE 37 (223)
T ss_dssp EEEEESCTTSSHHHHHHHHHHCC
T ss_pred EEEEECcCCCCHHHHHHHHhcCC
Confidence 47899999999999999998754
No 454
>2g3y_A GTP-binding protein GEM; small GTPase, GDP, inactive state, RGK family, structur genomics, structural genomics consortium, SGC, signaling PR; HET: GDP; 2.40A {Homo sapiens} SCOP: c.37.1.8
Probab=97.60 E-value=4.2e-05 Score=48.38 Aligned_cols=22 Identities=36% Similarity=0.599 Sum_probs=19.7
Q ss_pred EEEEEcCCCCCHHHHHHHHHhh
Q psy4405 8 TIALVGCQGVGRRTLKARLINS 29 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~ 29 (91)
-++|+|.+|+|||||++++.+.
T Consensus 39 kVvlvG~~~vGKSSLl~r~~~~ 60 (211)
T 2g3y_A 39 RVVLIGEQGVGKSTLANIFAGV 60 (211)
T ss_dssp EEEEECCTTSSHHHHHHHHHCC
T ss_pred EEEEECCCCCCHHHHHHHHHhC
Confidence 4899999999999999999853
No 455
>3i8s_A Ferrous iron transport protein B; GTPase, GPCR, iron uptake, FEO, cell inner membrane, cell ME GTP-binding, ION transport, membrane; 1.80A {Escherichia coli} PDB: 3i8x_A* 3i92_A* 3hyr_A 3hyt_A* 2wic_A* 2wib_A* 2wia_A*
Probab=97.60 E-value=4e-05 Score=50.15 Aligned_cols=24 Identities=38% Similarity=0.498 Sum_probs=21.5
Q ss_pred cEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 7 KTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 7 ~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-.++|+|.+|||||||+++|++..
T Consensus 4 ~~I~lvG~~n~GKSTLin~l~g~~ 27 (274)
T 3i8s_A 4 LTIGLIGNPNSGKTTLFNQLTGSR 27 (274)
T ss_dssp EEEEEEECTTSSHHHHHHHHHTTC
T ss_pred cEEEEECCCCCCHHHHHHHHhCCC
Confidence 368999999999999999998865
No 456
>1bif_A 6-phosphofructo-2-kinase/ fructose-2,6-bisphospha; transferase (phospho), phosphatase, hydrolase (phosp glycolysis, bifunctional enzyme; HET: AGS; 2.00A {Rattus norvegicus} SCOP: c.37.1.7 c.60.1.4 PDB: 3bif_A* 2bif_A* 1k6m_A* 1c80_A* 1c7z_A* 1c81_A* 1tip_A* 1fbt_A
Probab=97.59 E-value=4e-05 Score=53.68 Aligned_cols=25 Identities=20% Similarity=0.305 Sum_probs=22.0
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
..+|+++|.+||||||+++.|...+
T Consensus 39 ~~~IvlvGlpGsGKSTia~~La~~l 63 (469)
T 1bif_A 39 PTLIVMVGLPARGKTYISKKLTRYL 63 (469)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHHH
T ss_pred cEEEEEECCCCCCHHHHHHHHHHHH
Confidence 4478999999999999999998764
No 457
>4gzl_A RAS-related C3 botulinum toxin substrate 1; rossmann fold, GTP binding, membrane, hydrolase; HET: GNP; 2.00A {Homo sapiens} PDB: 3th5_A* 4gzm_A*
Probab=97.59 E-value=4.2e-05 Score=47.47 Aligned_cols=23 Identities=22% Similarity=0.300 Sum_probs=20.3
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-++|+|++|+|||||+++|....
T Consensus 32 ki~vvG~~~~GKSsLi~~l~~~~ 54 (204)
T 4gzl_A 32 KCVVVGDGAVGKTCLLISYTTNA 54 (204)
T ss_dssp EEEEEESTTSSHHHHHHHHHHSC
T ss_pred EEEEECcCCCCHHHHHHHHHhCC
Confidence 58899999999999999998643
No 458
>2r62_A Cell division protease FTSH homolog; ATPase domain, ATP-binding, cell CELL division, hydrolase, membrane, metal-binding; 3.30A {Helicobacter pylori} PDB: 2r65_A*
Probab=97.59 E-value=1.6e-05 Score=51.31 Aligned_cols=25 Identities=28% Similarity=0.426 Sum_probs=21.5
Q ss_pred cEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 7 KTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 7 ~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
+.+.|.||+|+|||+|++.|+....
T Consensus 45 ~~vll~G~~GtGKT~la~~la~~~~ 69 (268)
T 2r62_A 45 KGVLLVGPPGTGKTLLAKAVAGEAH 69 (268)
T ss_dssp SCCCCBCSSCSSHHHHHHHHHHHHT
T ss_pred ceEEEECCCCCcHHHHHHHHHHHhC
Confidence 3478899999999999999998653
No 459
>1sky_E F1-ATPase, F1-ATP synthase; F1FO ATP synthase, alpha3BETA3 SUBC F1-ATPase, hydrolase; 3.20A {Bacillus SP} SCOP: a.69.1.1 b.49.1.1 c.37.1.11
Probab=97.59 E-value=4.1e-05 Score=54.12 Aligned_cols=28 Identities=36% Similarity=0.506 Sum_probs=24.2
Q ss_pred CCCCcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 3 PLKRKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 3 ~~~g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-.+|..++|+||+|+|||||++.|+...
T Consensus 148 i~kGq~~~i~G~sGvGKTtL~~~l~~~~ 175 (473)
T 1sky_E 148 YIKGGKIGLFGGAGVGKTVLIQELIHNI 175 (473)
T ss_dssp EETTCEEEEECCSSSCHHHHHHHHHHHH
T ss_pred hccCCEEEEECCCCCCccHHHHHHHhhh
Confidence 3478889999999999999999987654
No 460
>1jwy_B Dynamin A GTPase domain; dynamin, GTPase, GDP, myosin, fusion-protein, hydrolase; HET: BGC ADP GDP; 2.30A {Dictyostelium discoideum} SCOP: c.37.1.8 PDB: 1jx2_B*
Probab=97.59 E-value=3.9e-05 Score=50.53 Aligned_cols=24 Identities=21% Similarity=0.506 Sum_probs=21.6
Q ss_pred cEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 7 KTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 7 ~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
..++|+|.+|||||||++.|++..
T Consensus 25 ~~I~vvG~~~~GKSTlln~l~g~~ 48 (315)
T 1jwy_B 25 PQIVVVGSQSSGKSSVLENIVGRD 48 (315)
T ss_dssp CEEEEEECSSSSHHHHHHHHHTSC
T ss_pred CeEEEEcCCCCCHHHHHHHHHCCC
Confidence 468999999999999999998764
No 461
>3q3j_B RHO-related GTP-binding protein RHO6; RAS-binding domain, plexin, small GTPase, structural genomic consortium, SGC; HET: GNP; 1.97A {Homo sapiens} PDB: 2rex_B* 2cls_A*
Probab=97.58 E-value=4.8e-05 Score=47.66 Aligned_cols=23 Identities=22% Similarity=0.323 Sum_probs=20.5
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-++|+|++|+|||||+++|....
T Consensus 29 ki~vvG~~~vGKSsL~~~l~~~~ 51 (214)
T 3q3j_B 29 KLVLVGDVQCGKTAMLQVLAKDC 51 (214)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEEECcCCCCHHHHHHHHhcCC
Confidence 58899999999999999998753
No 462
>2b6h_A ADP-ribosylation factor 5; membrane trafficking, GDP, structural genomics, structural G consortium, SGC, protein transport; HET: GDP; 1.76A {Homo sapiens} SCOP: c.37.1.8 PDB: 1z6x_A* 3aq4_A*
Probab=97.58 E-value=5.3e-05 Score=46.59 Aligned_cols=24 Identities=25% Similarity=0.385 Sum_probs=20.5
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhh
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINS 29 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~ 29 (91)
.--++|+|++|+|||||+++|...
T Consensus 29 ~~ki~v~G~~~vGKSsLi~~l~~~ 52 (192)
T 2b6h_A 29 QMRILMVGLDAAGKTTILYKLKLG 52 (192)
T ss_dssp CEEEEEEESTTSSHHHHHHHHCSS
T ss_pred ccEEEEECCCCCCHHHHHHHHHhC
Confidence 345899999999999999999754
No 463
>3eie_A Vacuolar protein sorting-associated protein 4; AAA ATPase, ATP-binding cassette, ATP-binding, endosome, MEM nucleotide-binding; 2.70A {Saccharomyces cerevisiae} PDB: 3eih_A* 2rko_A 3mhv_C
Probab=97.58 E-value=5.8e-05 Score=50.28 Aligned_cols=26 Identities=23% Similarity=0.318 Sum_probs=22.8
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
.+-+.|.||+|+|||+|++.|+....
T Consensus 51 ~~~vLl~GppGtGKT~la~aia~~~~ 76 (322)
T 3eie_A 51 TSGILLYGPPGTGKSYLAKAVATEAN 76 (322)
T ss_dssp CCEEEEECSSSSCHHHHHHHHHHHHT
T ss_pred CCeEEEECCCCCcHHHHHHHHHHHHC
Confidence 35689999999999999999998764
No 464
>3hdt_A Putative kinase; structura genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 2.79A {Clostridium symbiosum atcc 14940}
Probab=97.57 E-value=4.9e-05 Score=48.76 Aligned_cols=26 Identities=19% Similarity=0.199 Sum_probs=23.2
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
..+|+|.|+.||||||+++.|++.+.
T Consensus 14 ~~iI~i~g~~gsGk~~i~~~la~~lg 39 (223)
T 3hdt_A 14 NLIITIEREYGSGGRIVGKKLAEELG 39 (223)
T ss_dssp CEEEEEEECTTSCHHHHHHHHHHHHT
T ss_pred CeEEEEeCCCCCCHHHHHHHHHHHcC
Confidence 45899999999999999999998764
No 465
>2z43_A DNA repair and recombination protein RADA; archaea, filament, DNA binding, molecular SWI RECA, DMC1; HET: DNA; 1.93A {Sulfolobus solfataricus} PDB: 2bke_A* 2dfl_A* 2zub_A* 2zuc_A* 2zud_A*
Probab=97.57 E-value=5.3e-05 Score=50.68 Aligned_cols=26 Identities=23% Similarity=0.285 Sum_probs=23.4
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
.|+++.|.||+|+|||||+..|+...
T Consensus 106 ~G~i~~i~G~~GsGKT~la~~la~~~ 131 (324)
T 2z43_A 106 TRTMTEFFGEFGSGKTQLCHQLSVNV 131 (324)
T ss_dssp TTSEEEEEESTTSSHHHHHHHHHHHT
T ss_pred CCcEEEEECCCCCCHhHHHHHHHHHH
Confidence 58899999999999999999998754
No 466
>1sxj_D Activator 1 41 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=97.57 E-value=4.8e-05 Score=50.52 Aligned_cols=23 Identities=17% Similarity=0.271 Sum_probs=20.7
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
.+.|.||+|+||||+++.|.+.+
T Consensus 60 ~~ll~G~~G~GKT~la~~la~~l 82 (353)
T 1sxj_D 60 HMLFYGPPGTGKTSTILALTKEL 82 (353)
T ss_dssp CEEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHh
Confidence 38899999999999999998875
No 467
>1h65_A Chloroplast outer envelope protein OEP34; GTPase, translocon; HET: GDP; 2.0A {Pisum sativum} SCOP: c.37.1.8 PDB: 3bb1_A*
Probab=97.57 E-value=4.5e-05 Score=49.58 Aligned_cols=23 Identities=30% Similarity=0.527 Sum_probs=20.7
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
.++++|.+|+|||||++.|.+..
T Consensus 41 ~I~vvG~~g~GKSSLin~l~~~~ 63 (270)
T 1h65_A 41 TILVMGKGGVGKSSTVNSIIGER 63 (270)
T ss_dssp EEEEEESTTSSHHHHHHHHHTSC
T ss_pred EEEEECCCCCCHHHHHHHHhCCC
Confidence 58899999999999999998754
No 468
>2aka_B Dynamin-1; fusion protein, GTPase domain, myosin, contractIle protein; 1.90A {Rattus norvegicus} SCOP: c.37.1.8 PDB: 3l43_A*
Probab=97.56 E-value=6.3e-05 Score=49.07 Aligned_cols=25 Identities=24% Similarity=0.464 Sum_probs=21.9
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
...++|+|.+|+|||||+++|++..
T Consensus 26 ~~~i~vvG~~~~GKSSLln~l~g~~ 50 (299)
T 2aka_B 26 LPQIAVVGGQSAGKSSVLENFVGRD 50 (299)
T ss_dssp CCEEEEEEBTTSCHHHHHHHHHTSC
T ss_pred CCeEEEEeCCCCCHHHHHHHHHCCC
Confidence 3468999999999999999998764
No 469
>3p32_A Probable GTPase RV1496/MT1543; structural genomics, seattle structural genomics center for infectious disease, ssgcid, MEAB, MMAA; HET: GDP PGE; 1.90A {Mycobacterium tuberculosis} PDB: 3md0_A* 4gt1_A* 3nxs_A* 3tk1_A*
Probab=97.56 E-value=6.6e-05 Score=50.86 Aligned_cols=26 Identities=23% Similarity=0.325 Sum_probs=22.4
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
+..+++|+|++|+|||||++.|+..+
T Consensus 78 ~~~~I~i~G~~G~GKSTl~~~L~~~l 103 (355)
T 3p32_A 78 NAHRVGITGVPGVGKSTAIEALGMHL 103 (355)
T ss_dssp CSEEEEEECCTTSSHHHHHHHHHHHH
T ss_pred CceEEEEECCCCCCHHHHHHHHHHHH
Confidence 34589999999999999999998664
No 470
>1g41_A Heat shock protein HSLU; AAA-ATPase, CLPY, ATP-dependent proteolysis, chaperone; HET: ADP; 2.30A {Haemophilus influenzae} SCOP: c.37.1.20 PDB: 1g3i_A* 1im2_A* 1kyi_A* 1g4a_E* 1g4b_E 1yyf_A* 1do0_A* 1do2_A* 1e94_E* 1hqy_E* 1ht1_E* 1ht2_E*
Probab=97.56 E-value=6.3e-05 Score=52.80 Aligned_cols=27 Identities=30% Similarity=0.509 Sum_probs=23.6
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
++-+.|+||+|+||||++++|++.+..
T Consensus 50 ~~~iLl~GppGtGKT~lar~lA~~l~~ 76 (444)
T 1g41_A 50 PKNILMIGPTGVGKTEIARRLAKLANA 76 (444)
T ss_dssp CCCEEEECCTTSSHHHHHHHHHHHTTC
T ss_pred CceEEEEcCCCCCHHHHHHHHHHHcCC
Confidence 345889999999999999999998853
No 471
>3cnl_A YLQF, putative uncharacterized protein; circular permutation, GNP, signaling protein; HET: GNP; 2.00A {Thermotoga maritima} PDB: 3cnn_A* 3cno_A*
Probab=97.56 E-value=7e-05 Score=48.98 Aligned_cols=24 Identities=21% Similarity=0.451 Sum_probs=21.6
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
.++|+|.+|+|||||++.|.+...
T Consensus 101 ~v~~vG~~~vGKSslin~l~~~~~ 124 (262)
T 3cnl_A 101 RVLIVGVPNTGKSTIINKLKGKRA 124 (262)
T ss_dssp EEEEEESTTSSHHHHHHHHHTTCC
T ss_pred heEEeCCCCCCHHHHHHHHhcccc
Confidence 688999999999999999997663
No 472
>2qby_B CDC6 homolog 3, cell division control protein 6 homolog 3; winged-helix domain, helix-turn-helix, AAA+ ATPase domain, protein-DNA complex; HET: DNA SPD ADP; 3.35A {Sulfolobus solfataricus}
Probab=97.55 E-value=6.3e-05 Score=50.49 Aligned_cols=25 Identities=16% Similarity=0.321 Sum_probs=22.2
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
++.+.|.||+|+|||||++.+....
T Consensus 45 ~~~vll~G~~G~GKT~la~~l~~~~ 69 (384)
T 2qby_B 45 KFSNLFLGLTGTGKTFVSKYIFNEI 69 (384)
T ss_dssp CCEEEEEECTTSSHHHHHHHHHHHH
T ss_pred CCcEEEECCCCCCHHHHHHHHHHHH
Confidence 4579999999999999999998764
No 473
>3def_A T7I23.11 protein; chloroplast, TOC33, GTPase, hydrolase; HET: GDP; 1.96A {Arabidopsis thaliana} PDB: 3bb3_A* 3bb4_A* 2j3e_A*
Probab=97.55 E-value=5e-05 Score=49.24 Aligned_cols=23 Identities=30% Similarity=0.540 Sum_probs=20.9
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
.++|+|.+|+|||||++.|.+..
T Consensus 38 ~I~lvG~~g~GKSSLin~l~~~~ 60 (262)
T 3def_A 38 TVLVLGKGGVGKSSTVNSLIGEQ 60 (262)
T ss_dssp EEEEEECTTSSHHHHHHHHHTSC
T ss_pred EEEEECCCCCCHHHHHHHHhCCC
Confidence 58999999999999999999765
No 474
>2r6a_A DNAB helicase, replicative helicase; replication, DNAB; 2.90A {Geobacillus stearothermophilus} PDB: 2r6c_A 2r6d_A 2r6e_A 2vyf_A 2vye_A
Probab=97.55 E-value=6.4e-05 Score=52.44 Aligned_cols=26 Identities=12% Similarity=0.264 Sum_probs=23.5
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
+|++++|.|++|+|||||+..|+...
T Consensus 202 ~G~liiI~G~pG~GKTtl~l~ia~~~ 227 (454)
T 2r6a_A 202 RSDLIIVAARPSVGKTAFALNIAQNV 227 (454)
T ss_dssp TTCEEEEECCTTSCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHH
Confidence 58999999999999999999888765
No 475
>2bjv_A PSP operon transcriptional activator; AAA, transcription activation, gene regulation, sigma54 activator, enhancer binding protein, PSPF; 1.7A {Escherichia coli} PDB: 2bjw_A 2c96_A* 2c98_A* 2c99_A* 2c9c_A* 2vii_A*
Probab=97.54 E-value=6.8e-05 Score=48.34 Aligned_cols=26 Identities=23% Similarity=0.497 Sum_probs=22.8
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
+..+.|.||+|+|||++++.|.....
T Consensus 29 ~~~vll~G~~GtGKt~la~~i~~~~~ 54 (265)
T 2bjv_A 29 DKPVLIIGERGTGKELIASRLHYLSS 54 (265)
T ss_dssp CSCEEEECCTTSCHHHHHHHHHHTST
T ss_pred CCCEEEECCCCCcHHHHHHHHHHhcC
Confidence 45788999999999999999988764
No 476
>4ad8_A DNA repair protein RECN; DNA binding protein, ATPase domain; HET: DNA; 4.00A {Deinococcus radiodurans}
Probab=97.53 E-value=1.6e-05 Score=56.37 Aligned_cols=24 Identities=21% Similarity=0.140 Sum_probs=21.6
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
+.+|+|+||||||||+.+|.-.+.
T Consensus 62 ~n~i~G~NGaGKS~lleAl~~llg 85 (517)
T 4ad8_A 62 FCAFTGETGAGKSIIVDALGLLLG 85 (517)
T ss_dssp EEEEEESHHHHHHHHTHHHHHHTC
T ss_pred eEEEEcCCCCCHHHHHHHHHHHhc
Confidence 999999999999999999976653
No 477
>1jal_A YCHF protein; nucleotide-binding fold, structural genomics, structure 2 function project, S2F, unknown function; 2.40A {Haemophilus influenzae} SCOP: c.37.1.8 d.15.10.2
Probab=97.53 E-value=7.5e-05 Score=51.18 Aligned_cols=25 Identities=28% Similarity=0.364 Sum_probs=21.9
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
+..++|+|.+++|||||+++|++..
T Consensus 2 ~~kI~IVG~pnvGKSTL~n~Lt~~~ 26 (363)
T 1jal_A 2 GFKCGIVGLPNVGKSTLFNALTKAG 26 (363)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHTC
T ss_pred CCEEEEECCCCCCHHHHHHHHHCCC
Confidence 3468999999999999999999854
No 478
>2v3c_C SRP54, signal recognition 54 kDa protein; nucleotide-binding, signal recognition particle, GTP-binding, RNA-binding; 2.50A {Methanocaldococcus jannaschii} PDB: 3ndb_B
Probab=97.52 E-value=3.1e-05 Score=54.09 Aligned_cols=25 Identities=40% Similarity=0.535 Sum_probs=22.4
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
+++++|+|++|+||||++..|+..+
T Consensus 99 ~~vI~ivG~~GvGKTTla~~La~~l 123 (432)
T 2v3c_C 99 QNVILLVGIQGSGKTTTAAKLARYI 123 (432)
T ss_dssp CCCEEEECCSSSSTTHHHHHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHH
Confidence 3589999999999999999998865
No 479
>3pvs_A Replication-associated recombination protein A; maintenance of genome stability Pro recombination; 2.50A {Escherichia coli}
Probab=97.51 E-value=7.5e-05 Score=52.27 Aligned_cols=26 Identities=23% Similarity=0.354 Sum_probs=23.0
Q ss_pred cEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 7 KTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 7 ~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
..++|.||+|+|||||++.|......
T Consensus 51 ~~vLL~GppGtGKTtlAr~ia~~~~~ 76 (447)
T 3pvs_A 51 HSMILWGPPGTGKTTLAEVIARYANA 76 (447)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHTTC
T ss_pred cEEEEECCCCCcHHHHHHHHHHHhCC
Confidence 35899999999999999999998753
No 480
>1tue_A Replication protein E1; helicase, replication, E1E2 complex, AAA+ protein; 2.10A {Human papillomavirus type 18} SCOP: c.37.1.20
Probab=97.50 E-value=7.2e-05 Score=47.84 Aligned_cols=26 Identities=12% Similarity=0.261 Sum_probs=22.7
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
...++|.||+|+||||++.+|+..+.
T Consensus 58 kn~ili~GPPGtGKTt~a~ala~~l~ 83 (212)
T 1tue_A 58 KNCLVFCGPANTGKSYFGMSFIHFIQ 83 (212)
T ss_dssp CSEEEEESCGGGCHHHHHHHHHHHHT
T ss_pred ccEEEEECCCCCCHHHHHHHHHHHhC
Confidence 44689999999999999999998764
No 481
>1sxj_A Activator 1 95 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=97.50 E-value=8.2e-05 Score=52.66 Aligned_cols=26 Identities=19% Similarity=0.243 Sum_probs=23.4
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
.+.+.|.||+|+||||+++.|+..+.
T Consensus 77 ~~~lLL~GppGtGKTtla~~la~~l~ 102 (516)
T 1sxj_A 77 FRAAMLYGPPGIGKTTAAHLVAQELG 102 (516)
T ss_dssp CSEEEEECSTTSSHHHHHHHHHHHTT
T ss_pred CcEEEEECCCCCCHHHHHHHHHHHcC
Confidence 46899999999999999999998873
No 482
>1puj_A YLQF, conserved hypothetical protein YLQF; structural genomics, nysgxrc T18, GTPase, PSI, protein structure initiative; HET: GNP; 2.00A {Bacillus subtilis} SCOP: c.37.1.8
Probab=97.50 E-value=0.00013 Score=48.11 Aligned_cols=24 Identities=33% Similarity=0.508 Sum_probs=21.4
Q ss_pred cEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 7 KTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 7 ~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
-.++|+|.+|+|||||++.|.+..
T Consensus 121 ~~v~~vG~~nvGKSsliN~l~~~~ 144 (282)
T 1puj_A 121 IRALIIGIPNVGKSTLINRLAKKN 144 (282)
T ss_dssp EEEEEEESTTSSHHHHHHHHHTSC
T ss_pred ceEEEEecCCCchHHHHHHHhcCc
Confidence 368999999999999999998765
No 483
>2yc2_C IFT27, small RAB-related GTPase; transport protein, cilium, IFT complex; 2.59A {Chlamydomonas reinhardtii} PDB: 2yc4_C
Probab=97.49 E-value=1.9e-05 Score=48.51 Aligned_cols=22 Identities=27% Similarity=0.454 Sum_probs=4.1
Q ss_pred EEEEEcCCCCCHHHHHHHHHhh
Q psy4405 8 TIALVGCQGVGRRTLKARLINS 29 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~ 29 (91)
-++|+|++|+|||||+++|.+.
T Consensus 22 ~i~v~G~~~~GKssli~~l~~~ 43 (208)
T 2yc2_C 22 KVAVVGEATVGKSALISMFTSK 43 (208)
T ss_dssp EEEEC-----------------
T ss_pred EEEEECCCCCCHHHHHHHHHhC
Confidence 5789999999999999999876
No 484
>2zan_A Vacuolar protein sorting-associating protein 4B; SKD1, VPS4B, AAA ATPase, ATP-binding, coiled coil, membrane, nucleotide-binding, phosphorylation; HET: ATP; 3.00A {Mus musculus} PDB: 2zam_A* 2zao_A* 2jqh_A 2jqk_A 1wr0_A 2jq9_A 2k3w_A 1yxr_A
Probab=97.49 E-value=9.1e-05 Score=51.61 Aligned_cols=25 Identities=24% Similarity=0.375 Sum_probs=22.8
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
.+.+.|.||+|+|||+|++.|+...
T Consensus 167 ~~~vLL~GppGtGKT~lA~aia~~~ 191 (444)
T 2zan_A 167 WRGILLFGPPGTGKSYLAKAVATEA 191 (444)
T ss_dssp CSEEEEECSTTSSHHHHHHHHHHHC
T ss_pred CceEEEECCCCCCHHHHHHHHHHHc
Confidence 4678999999999999999999887
No 485
>1knx_A Probable HPR(Ser) kinase/phosphatase; HPR kinase, HPR kinase/phosphatase, HPRK/P, P-loop, walker A BOX, catabolite repression; 2.50A {Mycoplasma pneumoniae} SCOP: c.98.2.1 c.91.1.2
Probab=97.49 E-value=8.2e-05 Score=50.09 Aligned_cols=25 Identities=28% Similarity=0.409 Sum_probs=21.9
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhh
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINS 29 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~ 29 (91)
.|+-+.|.|+||+||||++..|...
T Consensus 146 ~g~gvli~G~sG~GKStlal~l~~~ 170 (312)
T 1knx_A 146 FGVGVLLTGRSGIGKSECALDLINK 170 (312)
T ss_dssp TTEEEEEEESSSSSHHHHHHHHHTT
T ss_pred CCEEEEEEcCCCCCHHHHHHHHHHc
Confidence 4777999999999999999988763
No 486
>4djt_A GTP-binding nuclear protein GSP1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, RAN family; HET: GDP; 1.80A {Encephalitozoon cuniculi}
Probab=97.48 E-value=2.2e-05 Score=48.96 Aligned_cols=22 Identities=36% Similarity=0.685 Sum_probs=19.4
Q ss_pred EEEEEcCCCCCHHHHHHHHHhh
Q psy4405 8 TIALVGCQGVGRRTLKARLINS 29 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~ 29 (91)
-++|+|++|+|||||+++|.+.
T Consensus 13 ki~vvG~~~~GKSsli~~l~~~ 34 (218)
T 4djt_A 13 KICLIGDGGVGKTTYINRVLDG 34 (218)
T ss_dssp EEEEECCTTSSHHHHHCBCTTC
T ss_pred EEEEECCCCCCHHHHHHHHhcC
Confidence 4789999999999999998754
No 487
>2zts_A Putative uncharacterized protein PH0186; KAIC like protein, ATP-binding, nucleotide-binding, ATP- binding protein; HET: ADP; 2.07A {Pyrococcus horikoshii}
Probab=97.48 E-value=0.0001 Score=46.59 Aligned_cols=24 Identities=33% Similarity=0.578 Sum_probs=21.1
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHh
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLIN 28 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~ 28 (91)
+|.++.|.|++|+|||+|+..++-
T Consensus 29 ~G~l~~i~G~pG~GKT~l~l~~~~ 52 (251)
T 2zts_A 29 EGTTVLLTGGTGTGKTTFAAQFIY 52 (251)
T ss_dssp TTCEEEEECCTTSSHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHH
Confidence 488999999999999999987653
No 488
>2qp9_X Vacuolar protein sorting-associated protein 4; ATPase domain, beta domain, C-terminal helix, ATP-binding, E nucleotide-binding; 2.90A {Saccharomyces cerevisiae} PDB: 2qpa_A*
Probab=97.47 E-value=7.9e-05 Score=50.46 Aligned_cols=25 Identities=24% Similarity=0.333 Sum_probs=22.2
Q ss_pred cEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 7 KTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 7 ~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
+-+.|.||+|+|||+|++.|+..+.
T Consensus 85 ~~iLL~GppGtGKT~la~ala~~~~ 109 (355)
T 2qp9_X 85 SGILLYGPPGTGKSYLAKAVATEAN 109 (355)
T ss_dssp CCEEEECSTTSCHHHHHHHHHHHHT
T ss_pred ceEEEECCCCCcHHHHHHHHHHHhC
Confidence 4588999999999999999998764
No 489
>4a9a_A Ribosome-interacting GTPase 1; DRG-DFRP complex, ribosome binding GTPase; 2.67A {Saccharomyces cerevisiae}
Probab=97.47 E-value=7.1e-05 Score=51.50 Aligned_cols=50 Identities=24% Similarity=0.275 Sum_probs=34.4
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhCCcCccccccccCCCCccch--hcCCceEeeC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSNPEKFAAVIPYTTRPMRELE--ENGQNYWFTS 59 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~~~~~~~~v~~~tr~~~~~~--~~~~~~~~~~ 59 (91)
-++|+|.+.+|||||+++|++..+ ...+...+|+.+..+. ..+..+.+++
T Consensus 74 ~V~ivG~PNvGKSTL~n~Lt~~~~--~v~~~pftT~~~~~g~~~~~~~~i~l~D 125 (376)
T 4a9a_A 74 SVGFVGFPSVGKSTLLSKLTGTES--EAAEYEFTTLVTVPGVIRYKGAKIQMLD 125 (376)
T ss_dssp EEEEECCCCHHHHHHHHHHHSBCC--CGGGTCSSCCCEEEEEEEETTEEEEEEE
T ss_pred eEEEECCCCCCHHHHHHHHhCCCC--cccCCCCceeeeeeEEEEeCCcEEEEEe
Confidence 589999999999999999998764 2234456777765442 3334444444
No 490
>2x77_A ADP-ribosylation factor; GTP-binding protein, small GTPase, nucleotide-binding; HET: GDP; 2.10A {Leishmania major}
Probab=97.47 E-value=4.2e-05 Score=46.55 Aligned_cols=22 Identities=18% Similarity=0.392 Sum_probs=19.5
Q ss_pred EEEEEcCCCCCHHHHHHHHHhh
Q psy4405 8 TIALVGCQGVGRRTLKARLINS 29 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~ 29 (91)
-++|+|++|+|||||+++|...
T Consensus 24 ~i~v~G~~~~GKssli~~l~~~ 45 (189)
T 2x77_A 24 RVLMLGLDNAGKTSILYRLHLG 45 (189)
T ss_dssp EEEEEEETTSSHHHHHHHTCCS
T ss_pred EEEEECCCCCCHHHHHHHHHcC
Confidence 5899999999999999999643
No 491
>2i1q_A DNA repair and recombination protein RADA; ATPase, recombinase, ATP complex, calcium stimulation, RECA, DMC1; HET: DNA ANP; 1.90A {Methanococcus voltae} SCOP: a.60.4.1 c.37.1.11 PDB: 1xu4_A* 2b21_A* 2fpk_A* 2fpl_A* 2fpm_A* 1t4g_A* 3fyh_A* 2f1j_A* 2f1i_A* 2f1h_A* 3ntu_A* 3ewa_A* 3ew9_A* 3etl_A* 4dc9_A* 2gdj_A*
Probab=97.46 E-value=8.9e-05 Score=49.32 Aligned_cols=25 Identities=12% Similarity=0.262 Sum_probs=22.7
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhh
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINS 29 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~ 29 (91)
.|+++.|.||+|+|||+|+..|+..
T Consensus 97 ~g~i~~i~G~~gsGKT~la~~la~~ 121 (322)
T 2i1q_A 97 SQSVTEFAGVFGSGKTQIMHQSCVN 121 (322)
T ss_dssp TTEEEEEEESTTSSHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHH
Confidence 4889999999999999999988864
No 492
>3co5_A Putative two-component system transcriptional RES regulator; structural genomics, APC89341.1; 2.40A {Neisseria gonorrhoeae}
Probab=97.46 E-value=2.9e-05 Score=46.08 Aligned_cols=26 Identities=15% Similarity=0.167 Sum_probs=21.8
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
+..+.|.||+|+|||++++.|.....
T Consensus 27 ~~~vll~G~~GtGKt~lA~~i~~~~~ 52 (143)
T 3co5_A 27 TSPVFLTGEAGSPFETVARYFHKNGT 52 (143)
T ss_dssp SSCEEEEEETTCCHHHHHGGGCCTTS
T ss_pred CCcEEEECCCCccHHHHHHHHHHhCC
Confidence 45688999999999999998876553
No 493
>3vfd_A Spastin; ATPase, microtubule severing, hydrolase; 3.30A {Homo sapiens}
Probab=97.46 E-value=0.00011 Score=50.12 Aligned_cols=26 Identities=19% Similarity=0.340 Sum_probs=23.4
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
++.+.|.||+|+|||+|++.|+....
T Consensus 148 ~~~vLL~GppGtGKT~la~aia~~~~ 173 (389)
T 3vfd_A 148 ARGLLLFGPPGNGKTMLAKAVAAESN 173 (389)
T ss_dssp CSEEEEESSTTSCHHHHHHHHHHHTT
T ss_pred CceEEEECCCCCCHHHHHHHHHHhhc
Confidence 46799999999999999999998874
No 494
>1c9k_A COBU, adenosylcobinamide kinase; alpha/beta structure rossmann fold P-loop, transferase; HET: 5GP; 2.20A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1cbu_A
Probab=97.45 E-value=7.9e-05 Score=46.52 Aligned_cols=22 Identities=23% Similarity=0.324 Sum_probs=19.6
Q ss_pred EEEEEcCCCCCHHHHHHHHHhh
Q psy4405 8 TIALVGCQGVGRRTLKARLINS 29 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~ 29 (91)
++.|+|++||||||++..|+..
T Consensus 1 ~ilV~Gg~~SGKS~~A~~la~~ 22 (180)
T 1c9k_A 1 MILVTGGARSGKSRHAEALIGD 22 (180)
T ss_dssp CEEEEECTTSSHHHHHHHHHCS
T ss_pred CEEEECCCCCcHHHHHHHHHhc
Confidence 3678999999999999999865
No 495
>2r44_A Uncharacterized protein; putative ATPase, structural genomics, joint center for struc genomics, JCSG; HET: MSE PG4; 2.00A {Cytophaga hutchinsonii atcc 33406}
Probab=97.44 E-value=5.6e-05 Score=50.21 Aligned_cols=27 Identities=19% Similarity=0.181 Sum_probs=23.4
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhCCc
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSNPE 32 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~~~ 32 (91)
+..+.|.||+|+|||+|++.|...+..
T Consensus 46 ~~~vll~G~pGtGKT~la~~la~~~~~ 72 (331)
T 2r44_A 46 GGHILLEGVPGLAKTLSVNTLAKTMDL 72 (331)
T ss_dssp TCCEEEESCCCHHHHHHHHHHHHHTTC
T ss_pred CCeEEEECCCCCcHHHHHHHHHHHhCC
Confidence 456889999999999999999987753
No 496
>2qen_A Walker-type ATPase; unknown function; HET: ADP; 2.25A {Pyrococcus abyssi}
Probab=97.42 E-value=0.00013 Score=48.15 Aligned_cols=25 Identities=24% Similarity=0.402 Sum_probs=22.2
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
++.++|.||.|+|||||++.+....
T Consensus 31 ~~~v~i~G~~G~GKT~Ll~~~~~~~ 55 (350)
T 2qen_A 31 YPLTLLLGIRRVGKSSLLRAFLNER 55 (350)
T ss_dssp CSEEEEECCTTSSHHHHHHHHHHHS
T ss_pred CCeEEEECCCcCCHHHHHHHHHHHc
Confidence 4689999999999999999998764
No 497
>3cf2_A TER ATPase, transitional endoplasmic reticulum ATPase, valosi; AAA, CDC48, ERAD, transport protein; HET: ADP ANP; 3.50A {Mus musculus} PDB: 3cf1_A* 3cf3_A* 1r7r_A*
Probab=97.42 E-value=0.00021 Score=53.42 Aligned_cols=26 Identities=23% Similarity=0.376 Sum_probs=22.9
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
++-+.|.||+|+|||+|+++|+....
T Consensus 238 p~GILL~GPPGTGKT~LAraiA~elg 263 (806)
T 3cf2_A 238 PRGILLYGPPGTGKTLIARAVANETG 263 (806)
T ss_dssp CCEEEEECCTTSCHHHHHHHHHTTTT
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHhC
Confidence 45688999999999999999998764
No 498
>2hjg_A GTP-binding protein ENGA; GTPase ENGA KH-domain, hydrolase; HET: GDP; 2.50A {Bacillus subtilis}
Probab=97.42 E-value=0.00011 Score=50.91 Aligned_cols=23 Identities=30% Similarity=0.553 Sum_probs=20.8
Q ss_pred EEEEEcCCCCCHHHHHHHHHhhC
Q psy4405 8 TIALVGCQGVGRRTLKARLINSN 30 (91)
Q Consensus 8 ~i~l~GpsGaGKsTl~~~L~~~~ 30 (91)
.++|+|.+|+|||||+++|++..
T Consensus 5 ~V~ivG~~nvGKStL~n~l~~~~ 27 (436)
T 2hjg_A 5 VVAIVGRPNVGKSTIFNRIAGER 27 (436)
T ss_dssp EEEEECSTTSSHHHHHHHHEEEE
T ss_pred EEEEECCCCCCHHHHHHHHhCCC
Confidence 68999999999999999998754
No 499
>3bh0_A DNAB-like replicative helicase; ATPase, replication; 2.35A {Bacillus phage SPP1}
Probab=97.41 E-value=0.00013 Score=48.66 Aligned_cols=25 Identities=8% Similarity=0.308 Sum_probs=22.5
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHhh
Q psy4405 5 KRKTIALVGCQGVGRRTLKARLINS 29 (91)
Q Consensus 5 ~g~~i~l~GpsGaGKsTl~~~L~~~ 29 (91)
+|.+++|.|++|+|||||+..++..
T Consensus 67 ~G~l~li~G~pG~GKTtl~l~ia~~ 91 (315)
T 3bh0_A 67 RRNFVLIAARPSMGKTAFALKQAKN 91 (315)
T ss_dssp TTCEEEEECCTTSSHHHHHHHHHHH
T ss_pred CCcEEEEEeCCCCCHHHHHHHHHHH
Confidence 5899999999999999999988754
No 500
>1hqc_A RUVB; extended AAA-ATPase domain, complex with nucleotide, hydrolase; HET: ADE; 3.20A {Thermus thermophilus} SCOP: a.4.5.11 c.37.1.20 PDB: 1ixs_B* 1ixr_C*
Probab=97.40 E-value=6.8e-05 Score=49.35 Aligned_cols=26 Identities=23% Similarity=0.351 Sum_probs=22.4
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHhhCC
Q psy4405 6 RKTIALVGCQGVGRRTLKARLINSNP 31 (91)
Q Consensus 6 g~~i~l~GpsGaGKsTl~~~L~~~~~ 31 (91)
...+.|.||+|+|||++++.|.....
T Consensus 38 ~~~vll~G~~GtGKT~la~~i~~~~~ 63 (324)
T 1hqc_A 38 LEHLLLFGPPGLGKTTLAHVIAHELG 63 (324)
T ss_dssp CCCCEEECCTTCCCHHHHHHHHHHHT
T ss_pred CCcEEEECCCCCCHHHHHHHHHHHhC
Confidence 35788999999999999999987654
Done!