Query psy4411
Match_columns 99
No_of_seqs 116 out of 1039
Neff 6.7
Searched_HMMs 29240
Date Sat Aug 17 00:52:02 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4411.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4411hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4ekn_B Aspartate carbamoyltran 100.0 6.7E-31 2.3E-35 198.5 13.1 98 1-98 80-210 (306)
2 1ml4_A Aspartate transcarbamoy 100.0 3.7E-31 1.3E-35 200.1 11.5 98 1-98 84-213 (308)
3 3csu_A Protein (aspartate carb 100.0 3.3E-30 1.1E-34 195.0 10.6 98 1-98 82-213 (310)
4 1pg5_A Aspartate carbamoyltran 100.0 1.7E-29 5.8E-34 190.4 11.0 95 1-98 78-205 (299)
5 2i6u_A Otcase, ornithine carba 100.0 2.9E-29 9.9E-34 189.6 12.2 97 1-98 78-209 (307)
6 1vlv_A Otcase, ornithine carba 100.0 3.9E-29 1.3E-33 190.2 12.8 97 1-98 97-228 (325)
7 1pvv_A Otcase, ornithine carba 100.0 4.6E-29 1.6E-33 189.1 13.0 96 1-98 85-215 (315)
8 3tpf_A Otcase, ornithine carba 100.0 4.8E-29 1.6E-33 188.5 11.6 96 1-98 75-206 (307)
9 1dxh_A Ornithine carbamoyltran 100.0 5.1E-29 1.7E-33 190.2 11.0 97 1-98 84-216 (335)
10 1duv_G Octase-1, ornithine tra 100.0 6.9E-29 2.4E-33 189.3 11.5 97 1-98 83-216 (333)
11 3gd5_A Otcase, ornithine carba 100.0 1.1E-28 3.7E-33 187.6 12.5 96 1-98 87-217 (323)
12 1oth_A Protein (ornithine tran 100.0 6.5E-29 2.2E-33 188.7 10.5 96 1-98 85-215 (321)
13 4ep1_A Otcase, ornithine carba 100.0 7.3E-29 2.5E-33 189.6 10.8 96 1-98 109-239 (340)
14 2w37_A Ornithine carbamoyltran 100.0 1.2E-28 4.1E-33 189.5 11.9 97 1-98 106-237 (359)
15 4amu_A Ornithine carbamoyltran 100.0 1.9E-28 6.6E-33 188.7 12.0 97 1-98 110-243 (365)
16 3grf_A Ornithine carbamoyltran 100.0 1.7E-28 5.8E-33 186.8 10.8 97 1-98 84-226 (328)
17 4a8t_A Putrescine carbamoyltra 100.0 3.8E-28 1.3E-32 185.6 12.4 96 1-98 102-235 (339)
18 4a8p_A Putrescine carbamoyltra 100.0 5.2E-28 1.8E-32 185.8 12.0 96 1-98 80-213 (355)
19 3sds_A Ornithine carbamoyltran 100.0 9.5E-28 3.3E-32 184.2 12.4 96 1-98 105-250 (353)
20 4f2g_A Otcase 1, ornithine car 100.0 1E-28 3.4E-33 186.8 6.8 94 1-98 84-208 (309)
21 2ef0_A Ornithine carbamoyltran 99.9 2E-27 6.8E-32 179.2 11.5 85 1-87 84-199 (301)
22 1zq6_A Otcase, ornithine carba 99.9 3.1E-27 1.1E-31 181.7 11.8 97 2-98 110-257 (359)
23 4h31_A Otcase, ornithine carba 99.9 3E-27 1E-31 181.7 10.7 97 1-98 109-242 (358)
24 3r7f_A Aspartate carbamoyltran 99.9 7E-27 2.4E-31 176.5 9.9 80 1-80 75-187 (304)
25 3d6n_B Aspartate carbamoyltran 99.9 1E-25 3.5E-30 169.3 9.4 81 1-81 73-187 (291)
26 3q98_A Transcarbamylase; rossm 99.9 2E-24 6.7E-29 168.0 11.7 98 1-98 102-258 (399)
27 2yfk_A Aspartate/ornithine car 99.9 4.2E-24 1.4E-28 167.0 9.8 98 1-98 99-255 (418)
28 1js1_X Transcarbamylase; alpha 99.9 1.8E-23 6E-28 159.0 8.7 78 3-84 89-214 (324)
29 3kzn_A Aotcase, N-acetylornith 99.9 4.7E-21 1.6E-25 147.0 12.0 97 2-98 110-257 (359)
30 3dfz_A SIRC, precorrin-2 dehyd 94.5 0.11 3.8E-06 37.0 6.4 52 36-93 27-78 (223)
31 3fbs_A Oxidoreductase; structu 93.3 0.52 1.8E-05 32.5 8.0 55 37-95 138-192 (297)
32 2v03_A Cysteine synthase B; py 91.3 0.69 2.4E-05 33.5 6.9 54 40-98 61-114 (303)
33 3ngx_A Bifunctional protein fo 91.1 1.3 4.4E-05 32.7 8.2 41 32-75 143-183 (276)
34 1j0a_A 1-aminocyclopropane-1-c 90.8 0.53 1.8E-05 34.4 5.8 56 41-98 71-126 (325)
35 1ve1_A O-acetylserine sulfhydr 90.4 0.58 2E-05 33.8 5.7 47 50-98 69-115 (304)
36 2rkb_A Serine dehydratase-like 90.4 0.53 1.8E-05 34.2 5.5 54 40-98 54-107 (318)
37 1v71_A Serine racemase, hypoth 90.3 0.61 2.1E-05 34.0 5.8 46 51-98 82-127 (323)
38 2q3b_A Cysteine synthase A; py 89.9 0.58 2E-05 34.0 5.4 47 50-98 74-120 (313)
39 3dwg_A Cysteine synthase B; su 89.8 0.9 3.1E-05 33.4 6.4 59 35-98 67-126 (325)
40 1y7l_A O-acetylserine sulfhydr 89.8 0.51 1.7E-05 34.3 5.0 53 41-98 63-115 (316)
41 1pjq_A CYSG, siroheme synthase 89.8 0.96 3.3E-05 34.9 6.8 50 37-92 9-58 (457)
42 1z7w_A Cysteine synthase; tran 89.7 0.61 2.1E-05 34.0 5.4 46 51-98 75-120 (322)
43 3l6b_A Serine racemase; pyrido 89.4 0.75 2.6E-05 34.1 5.7 53 41-98 77-129 (346)
44 1o58_A O-acetylserine sulfhydr 89.2 0.61 2.1E-05 33.8 5.0 47 50-98 72-118 (303)
45 2egu_A Cysteine synthase; O-ac 89.2 0.65 2.2E-05 33.6 5.2 47 50-98 72-118 (308)
46 2pqm_A Cysteine synthase; OASS 89.1 0.99 3.4E-05 33.4 6.2 59 35-98 72-131 (343)
47 3tbh_A O-acetyl serine sulfhyd 89.1 0.7 2.4E-05 34.1 5.4 45 52-98 81-125 (334)
48 4b4u_A Bifunctional protein fo 89.1 2 6.9E-05 32.1 7.8 44 32-77 170-214 (303)
49 4a5o_A Bifunctional protein fo 88.8 2.2 7.6E-05 31.5 7.9 41 32-74 152-193 (286)
50 3cty_A Thioredoxin reductase; 88.7 1.2 4E-05 31.4 6.1 55 38-95 153-208 (319)
51 1qp8_A Formate dehydrogenase; 88.5 1 3.5E-05 33.0 5.8 36 37-75 121-156 (303)
52 4d9i_A Diaminopropionate ammon 88.3 0.95 3.2E-05 34.2 5.7 46 50-97 119-164 (398)
53 4h27_A L-serine dehydratase/L- 88.2 0.79 2.7E-05 34.3 5.2 52 41-97 94-145 (364)
54 2gn0_A Threonine dehydratase c 88.2 0.77 2.6E-05 33.9 5.1 46 51-98 96-141 (342)
55 1b0a_A Protein (fold bifunctio 88.0 2.7 9.2E-05 31.1 7.8 43 32-76 150-193 (288)
56 1p5j_A L-serine dehydratase; l 87.6 1 3.5E-05 33.8 5.5 52 41-97 94-145 (372)
57 3aey_A Threonine synthase; PLP 87.6 1.3 4.4E-05 32.7 6.0 48 50-98 84-131 (351)
58 1f2d_A 1-aminocyclopropane-1-c 87.5 1 3.4E-05 33.2 5.3 56 42-98 69-133 (341)
59 1kyq_A Met8P, siroheme biosynt 87.4 0.46 1.6E-05 34.8 3.3 37 37-76 10-46 (274)
60 1wwk_A Phosphoglycerate dehydr 87.4 0.87 3E-05 33.4 4.9 36 37-75 139-174 (307)
61 1ve5_A Threonine deaminase; ri 87.2 0.56 1.9E-05 34.0 3.7 52 40-96 65-116 (311)
62 2c2x_A Methylenetetrahydrofola 87.0 3 0.0001 30.8 7.6 42 32-75 149-193 (281)
63 2d1f_A Threonine synthase; ami 87.0 1.5 5E-05 32.6 6.0 47 50-97 92-138 (360)
64 2zsj_A Threonine synthase; PLP 87.0 1.6 5.6E-05 32.1 6.2 48 50-98 86-133 (352)
65 3ss7_X D-serine dehydratase; t 86.9 1.2 4.1E-05 34.3 5.6 52 42-98 162-213 (442)
66 2ekl_A D-3-phosphoglycerate de 86.8 1.1 3.7E-05 32.9 5.1 36 37-75 139-174 (313)
67 1leh_A Leucine dehydrogenase; 86.8 2.1 7.2E-05 32.4 6.8 38 33-73 164-203 (364)
68 3iau_A Threonine deaminase; py 86.8 1.4 4.9E-05 32.8 5.9 51 42-97 110-160 (366)
69 4aec_A Cysteine synthase, mito 86.8 1.1 3.8E-05 34.7 5.4 53 41-98 176-228 (430)
70 3h9u_A Adenosylhomocysteinase; 86.8 2.2 7.6E-05 33.3 7.1 36 36-74 207-242 (436)
71 4d9b_A D-cysteine desulfhydras 86.7 1.2 4E-05 32.9 5.3 46 52-97 92-143 (342)
72 3gvx_A Glycerate dehydrogenase 86.6 0.94 3.2E-05 33.2 4.7 36 37-75 119-154 (290)
73 3lzw_A Ferredoxin--NADP reduct 86.4 2.9 9.9E-05 29.1 7.0 55 38-95 152-207 (332)
74 1tzj_A ACC deaminase, 1-aminoc 86.3 1.3 4.4E-05 32.3 5.3 55 42-97 69-129 (338)
75 3hg7_A D-isomer specific 2-hyd 86.2 1.2 4.1E-05 33.1 5.1 36 37-75 137-172 (324)
76 1jbq_A B, cystathionine beta-s 86.1 1.6 5.4E-05 33.8 5.9 58 35-97 155-213 (435)
77 2cuk_A Glycerate dehydrogenase 86.1 1.1 3.9E-05 32.8 4.9 36 37-75 141-176 (311)
78 1gdh_A D-glycerate dehydrogena 86.0 1.1 3.7E-05 33.0 4.8 35 37-74 143-177 (320)
79 4hy3_A Phosphoglycerate oxidor 86.0 1 3.4E-05 34.2 4.7 36 37-75 173-208 (365)
80 4e5n_A Thermostable phosphite 86.0 0.84 2.9E-05 33.9 4.2 37 37-76 142-178 (330)
81 3gg9_A D-3-phosphoglycerate de 85.7 1.2 4E-05 33.5 4.9 35 37-74 157-191 (352)
82 2o4c_A Erythronate-4-phosphate 85.7 0.68 2.3E-05 35.4 3.6 39 33-74 108-147 (380)
83 2d0i_A Dehydrogenase; structur 85.6 1.2 4E-05 33.0 4.8 36 37-75 143-178 (333)
84 2yq5_A D-isomer specific 2-hyd 85.4 0.96 3.3E-05 34.0 4.3 36 37-75 145-180 (343)
85 2q0l_A TRXR, thioredoxin reduc 85.3 3.5 0.00012 28.6 7.0 54 38-94 141-196 (311)
86 1dxy_A D-2-hydroxyisocaproate 85.3 1.1 3.7E-05 33.2 4.5 36 37-75 142-177 (333)
87 3evt_A Phosphoglycerate dehydr 85.3 1.2 4.2E-05 33.0 4.8 36 37-75 134-169 (324)
88 1mx3_A CTBP1, C-terminal bindi 85.2 1.3 4.5E-05 33.2 4.9 36 37-75 165-200 (347)
89 3vc3_A Beta-cyanoalnine syntha 85.2 1.7 5.9E-05 32.2 5.5 52 41-97 88-139 (344)
90 2dbq_A Glyoxylate reductase; D 85.1 1.5 5E-05 32.4 5.1 36 37-75 147-182 (334)
91 2g76_A 3-PGDH, D-3-phosphoglyc 85.1 1.3 4.3E-05 33.1 4.8 36 37-75 162-197 (335)
92 4dgs_A Dehydrogenase; structur 85.1 1.3 4.3E-05 33.3 4.8 36 37-75 168-203 (340)
93 4g2n_A D-isomer specific 2-hyd 85.0 1.3 4.4E-05 33.3 4.8 36 37-75 170-205 (345)
94 3d4o_A Dipicolinate synthase s 84.9 1.2 4.2E-05 32.0 4.5 36 37-75 152-187 (293)
95 2vdc_G Glutamate synthase [NAD 84.8 3.9 0.00013 31.3 7.5 55 38-95 262-320 (456)
96 2pi1_A D-lactate dehydrogenase 84.6 1.1 3.8E-05 33.3 4.3 36 37-75 138-173 (334)
97 2q7v_A Thioredoxin reductase; 84.6 3.4 0.00012 29.1 6.7 54 38-94 150-205 (325)
98 1fl2_A Alkyl hydroperoxide red 84.6 3.3 0.00011 28.8 6.6 54 38-94 142-197 (310)
99 1sc6_A PGDH, D-3-phosphoglycer 84.5 1.4 4.8E-05 33.7 4.9 36 37-75 142-177 (404)
100 3pc3_A CG1753, isoform A; CBS, 84.4 3.1 0.00011 32.4 6.9 60 33-97 105-165 (527)
101 2w2k_A D-mandelate dehydrogena 84.3 1.6 5.5E-05 32.5 5.1 36 37-75 160-196 (348)
102 2gqw_A Ferredoxin reductase; f 84.3 4.2 0.00015 30.2 7.4 55 39-96 144-206 (408)
103 2bc0_A NADH oxidase; flavoprot 84.2 3.7 0.00013 31.3 7.2 55 38-95 192-254 (490)
104 2q5c_A NTRC family transcripti 84.1 0.83 2.8E-05 31.5 3.2 82 11-96 45-147 (196)
105 1xdw_A NAD+-dependent (R)-2-hy 84.1 1.2 4.1E-05 32.9 4.3 36 37-75 143-178 (331)
106 3f8d_A Thioredoxin reductase ( 83.9 3.5 0.00012 28.5 6.5 54 38-94 152-207 (323)
107 3jtm_A Formate dehydrogenase, 83.8 1.5 5.3E-05 32.9 4.8 36 37-75 161-196 (351)
108 1j4a_A D-LDH, D-lactate dehydr 83.8 1.3 4.3E-05 32.9 4.3 36 37-75 143-178 (333)
109 2pju_A Propionate catabolism o 83.3 0.72 2.5E-05 32.7 2.7 75 18-96 64-159 (225)
110 3h9u_A Adenosylhomocysteinase; 83.3 7 0.00024 30.5 8.4 61 32-94 32-95 (436)
111 3pp8_A Glyoxylate/hydroxypyruv 83.1 1.5 5E-05 32.4 4.4 36 37-75 136-171 (315)
112 3itj_A Thioredoxin reductase 1 83.1 5 0.00017 28.0 7.0 55 38-95 171-227 (338)
113 2rir_A Dipicolinate synthase, 82.9 1.7 5.7E-05 31.3 4.5 36 37-75 154-189 (300)
114 2zbw_A Thioredoxin reductase; 82.6 4.3 0.00015 28.5 6.6 54 38-94 150-208 (335)
115 4a26_A Putative C-1-tetrahydro 82.3 3.6 0.00012 30.6 6.2 37 36-74 161-197 (300)
116 3n58_A Adenosylhomocysteinase; 82.3 8 0.00028 30.5 8.4 61 32-94 34-97 (464)
117 4a5l_A Thioredoxin reductase; 82.3 6.5 0.00022 27.2 7.3 45 38-85 150-195 (314)
118 1v8b_A Adenosylhomocysteinase; 82.2 1.7 5.7E-05 34.3 4.6 36 37-75 254-289 (479)
119 3ba1_A HPPR, hydroxyphenylpyru 82.2 1.6 5.4E-05 32.5 4.2 36 37-75 161-196 (333)
120 3k5p_A D-3-phosphoglycerate de 82.2 2 6.8E-05 33.2 4.9 36 37-75 153-188 (416)
121 4iin_A 3-ketoacyl-acyl carrier 81.7 2.1 7.3E-05 29.8 4.6 59 36-96 25-83 (271)
122 2gcg_A Glyoxylate reductase/hy 81.7 1.6 5.3E-05 32.2 4.0 36 37-75 152-187 (330)
123 1np3_A Ketol-acid reductoisome 81.7 2.2 7.6E-05 31.4 4.9 49 38-93 14-62 (338)
124 2nac_A NAD-dependent formate d 81.6 2 7E-05 32.8 4.8 36 37-75 188-223 (393)
125 1nhp_A NADH peroxidase; oxidor 81.5 6.9 0.00024 29.2 7.6 54 39-95 148-209 (447)
126 3l07_A Bifunctional protein fo 81.3 3.8 0.00013 30.2 6.0 38 36-75 157-194 (285)
127 1tdj_A Biosynthetic threonine 81.3 2.4 8.1E-05 33.7 5.2 42 53-96 89-130 (514)
128 3aog_A Glutamate dehydrogenase 81.3 4.2 0.00014 31.8 6.5 38 33-73 227-265 (440)
129 3oet_A Erythronate-4-phosphate 81.3 1.3 4.5E-05 33.9 3.6 35 37-74 116-150 (381)
130 3p2o_A Bifunctional protein fo 81.1 3.9 0.00013 30.2 6.0 38 36-75 156-193 (285)
131 3d1c_A Flavin-containing putat 80.9 5.5 0.00019 28.3 6.7 36 38-76 164-199 (369)
132 3nrc_A Enoyl-[acyl-carrier-pro 80.6 8.2 0.00028 26.9 7.4 53 33-88 19-71 (280)
133 3p2y_A Alanine dehydrogenase/p 80.3 2.9 0.0001 32.0 5.2 34 38-74 182-215 (381)
134 2j6i_A Formate dehydrogenase; 80.2 2.3 7.8E-05 31.9 4.6 36 37-75 161-197 (364)
135 1vdc_A NTR, NADPH dependent th 80.1 5.5 0.00019 27.9 6.4 54 38-94 157-212 (333)
136 3is3_A 17BETA-hydroxysteroid d 80.0 3 0.0001 29.1 4.9 58 36-95 14-71 (270)
137 1zmd_A Dihydrolipoyl dehydroge 80.0 5.7 0.00019 29.9 6.8 53 40-95 178-238 (474)
138 3d64_A Adenosylhomocysteinase; 79.8 2.6 8.9E-05 33.3 4.9 36 37-75 274-309 (494)
139 1x13_A NAD(P) transhydrogenase 79.8 3.5 0.00012 31.2 5.5 49 37-93 169-217 (401)
140 3mw9_A GDH 1, glutamate dehydr 79.2 5 0.00017 31.9 6.3 34 37-73 241-274 (501)
141 3r9u_A Thioredoxin reductase; 79.0 6.6 0.00023 27.0 6.4 55 38-95 145-201 (315)
142 1a4i_A Methylenetetrahydrofola 78.8 4.6 0.00016 30.0 5.8 40 33-74 157-197 (301)
143 1edz_A 5,10-methylenetetrahydr 78.7 4.9 0.00017 30.0 5.9 36 35-72 171-207 (320)
144 4gcm_A TRXR, thioredoxin reduc 78.5 8.3 0.00029 26.9 6.9 36 38-76 143-178 (312)
145 1c1d_A L-phenylalanine dehydro 78.5 3.5 0.00012 31.1 5.1 39 33-74 166-206 (355)
146 3gvp_A Adenosylhomocysteinase 78.5 8.3 0.00028 30.1 7.3 61 32-94 43-106 (435)
147 2cdu_A NADPH oxidase; flavoenz 78.4 8.2 0.00028 28.8 7.2 55 39-96 148-210 (452)
148 4fk1_A Putative thioredoxin re 78.1 5.1 0.00017 28.1 5.7 54 38-94 144-197 (304)
149 1wkv_A Cysteine synthase; homo 78.0 3.4 0.00012 31.3 5.0 51 40-95 145-195 (389)
150 1q1r_A Putidaredoxin reductase 77.9 7.7 0.00026 29.0 6.9 54 39-95 148-209 (431)
151 1lvl_A Dihydrolipoamide dehydr 77.8 7.5 0.00026 29.2 6.9 52 40-94 171-229 (458)
152 1v59_A Dihydrolipoamide dehydr 77.8 9.9 0.00034 28.6 7.5 53 40-95 183-242 (478)
153 1mo9_A ORF3; nucleotide bindin 77.7 13 0.00045 28.5 8.3 57 36-95 210-273 (523)
154 3afn_B Carbonyl reductase; alp 77.5 8.8 0.0003 25.8 6.6 37 37-75 4-40 (258)
155 1o94_A Tmadh, trimethylamine d 77.4 7.7 0.00026 31.4 7.1 56 38-95 526-589 (729)
156 4hp8_A 2-deoxy-D-gluconate 3-d 77.4 9.8 0.00034 27.1 7.0 55 37-96 6-60 (247)
157 3q2o_A Phosphoribosylaminoimid 77.3 3.9 0.00013 30.2 5.0 35 38-75 12-46 (389)
158 2v3a_A Rubredoxin reductase; a 77.2 10 0.00035 27.6 7.3 55 39-96 144-206 (384)
159 1ygy_A PGDH, D-3-phosphoglycer 76.8 3.4 0.00012 32.4 4.8 36 37-75 139-174 (529)
160 1xhc_A NADH oxidase /nitrite r 76.7 5.8 0.0002 29.1 5.8 53 40-95 143-201 (367)
161 3uf0_A Short-chain dehydrogena 76.6 8.8 0.0003 26.9 6.6 57 36-96 27-83 (273)
162 2hq1_A Glucose/ribitol dehydro 76.6 8.5 0.00029 25.9 6.3 33 38-72 3-35 (247)
163 1trb_A Thioredoxin reductase; 76.6 11 0.00038 26.1 7.1 54 38-94 143-201 (320)
164 2yqu_A 2-oxoglutarate dehydrog 76.6 8.4 0.00029 28.8 6.8 53 40-95 167-226 (455)
165 3ijr_A Oxidoreductase, short c 76.1 5.5 0.00019 28.2 5.4 37 36-74 43-79 (291)
166 3aoe_E Glutamate dehydrogenase 76.0 9 0.00031 29.6 6.9 38 33-73 210-248 (419)
167 3kvo_A Hydroxysteroid dehydrog 75.8 16 0.00054 26.8 8.0 37 36-74 41-77 (346)
168 3edm_A Short chain dehydrogena 75.5 6.4 0.00022 27.2 5.5 36 36-73 4-39 (259)
169 4fn4_A Short chain dehydrogena 75.4 4.9 0.00017 28.6 5.0 59 35-96 2-60 (254)
170 3cgb_A Pyridine nucleotide-dis 75.3 6.2 0.00021 29.9 5.8 54 39-95 185-245 (480)
171 1zk7_A HGII, reductase, mercur 75.2 14 0.00047 27.7 7.7 53 40-95 176-234 (467)
172 1ebd_A E3BD, dihydrolipoamide 75.1 11 0.00038 28.1 7.1 53 40-95 170-229 (455)
173 3ond_A Adenosylhomocysteinase; 75.1 15 0.0005 29.0 8.0 61 32-94 46-109 (488)
174 3ce6_A Adenosylhomocysteinase; 74.7 10 0.00036 29.8 7.1 49 37-93 271-319 (494)
175 3fr7_A Putative ketol-acid red 74.6 4 0.00014 32.7 4.7 36 36-74 49-91 (525)
176 3ef6_A Toluene 1,2-dioxygenase 74.6 7.9 0.00027 28.6 6.1 54 39-95 142-203 (410)
177 1v8z_A Tryptophan synthase bet 74.6 3.6 0.00012 30.5 4.3 46 53-98 109-155 (388)
178 3iwa_A FAD-dependent pyridine 74.2 10 0.00035 28.5 6.8 54 39-95 158-220 (472)
179 1jf8_A Arsenate reductase; ptp 73.9 10 0.00035 24.1 5.9 54 41-94 4-59 (131)
180 3oc4_A Oxidoreductase, pyridin 73.9 10 0.00035 28.4 6.6 54 39-95 146-207 (452)
181 3kb6_A D-lactate dehydrogenase 73.8 4 0.00014 30.3 4.3 36 37-75 138-173 (334)
182 2a87_A TRXR, TR, thioredoxin r 73.7 8.7 0.0003 27.1 6.0 54 38-94 153-208 (335)
183 3orq_A N5-carboxyaminoimidazol 73.7 6.1 0.00021 29.2 5.3 36 38-76 10-45 (377)
184 1v8b_A Adenosylhomocysteinase; 73.6 14 0.00046 29.1 7.4 60 32-93 35-98 (479)
185 4dio_A NAD(P) transhydrogenase 73.5 4.7 0.00016 31.1 4.7 50 37-94 187-236 (405)
186 2q2v_A Beta-D-hydroxybutyrate 73.5 18 0.00061 24.7 7.4 52 38-94 2-53 (255)
187 1onf_A GR, grase, glutathione 73.3 12 0.00041 28.5 7.0 53 40-95 176-235 (500)
188 3ntd_A FAD-dependent pyridine 73.2 14 0.00046 28.3 7.3 56 38-96 149-211 (565)
189 3c85_A Putative glutathione-re 73.2 7.7 0.00026 25.2 5.2 49 37-93 36-85 (183)
190 3ksu_A 3-oxoacyl-acyl carrier 73.1 5.3 0.00018 27.7 4.6 36 36-73 7-42 (262)
191 4fcc_A Glutamate dehydrogenase 73.1 4.3 0.00015 31.8 4.5 35 36-73 231-265 (450)
192 3h7a_A Short chain dehydrogena 73.0 15 0.0005 25.3 6.9 57 37-96 4-60 (252)
193 3ics_A Coenzyme A-disulfide re 72.8 14 0.00046 28.7 7.3 55 38-95 185-246 (588)
194 3v2g_A 3-oxoacyl-[acyl-carrier 72.8 7.6 0.00026 27.2 5.4 35 37-73 28-62 (271)
195 3ce6_A Adenosylhomocysteinase; 72.8 21 0.00073 28.0 8.4 57 32-90 49-108 (494)
196 1gtm_A Glutamate dehydrogenase 72.8 5 0.00017 30.9 4.7 38 34-74 204-244 (419)
197 3fg2_P Putative rubredoxin red 72.7 14 0.00049 27.0 7.1 54 39-95 141-202 (404)
198 3dtt_A NADP oxidoreductase; st 72.7 4.8 0.00016 27.9 4.3 37 35-74 14-50 (245)
199 4dmm_A 3-oxoacyl-[acyl-carrier 72.5 5.6 0.00019 27.8 4.7 36 37-74 25-60 (269)
200 3gvp_A Adenosylhomocysteinase 72.4 11 0.00036 29.5 6.5 35 37-74 217-251 (435)
201 3llv_A Exopolyphosphatase-rela 72.3 12 0.00042 23.0 5.9 47 39-93 5-51 (141)
202 1vp8_A Hypothetical protein AF 72.2 7.3 0.00025 27.5 5.1 42 53-96 55-103 (201)
203 3lk7_A UDP-N-acetylmuramoylala 72.0 14 0.00049 28.0 7.1 55 37-95 6-60 (451)
204 3lxd_A FAD-dependent pyridine 72.0 16 0.00056 26.8 7.3 54 40-96 152-213 (415)
205 1l7d_A Nicotinamide nucleotide 71.9 9.7 0.00033 28.4 6.1 36 37-75 169-204 (384)
206 1jl3_A Arsenate reductase; alp 71.9 9.9 0.00034 24.3 5.4 54 41-94 4-59 (139)
207 3ond_A Adenosylhomocysteinase; 71.8 14 0.00049 29.1 7.2 35 37-74 262-296 (488)
208 4dll_A 2-hydroxy-3-oxopropiona 71.8 15 0.00053 26.3 7.0 48 38-93 29-76 (320)
209 4iiu_A 3-oxoacyl-[acyl-carrier 71.6 5.7 0.0002 27.4 4.5 57 37-95 23-79 (267)
210 2eq6_A Pyruvate dehydrogenase 71.5 16 0.00056 27.4 7.3 54 39-95 168-228 (464)
211 2tmg_A Protein (glutamate dehy 71.5 11 0.00039 29.0 6.5 38 33-73 201-240 (415)
212 3n58_A Adenosylhomocysteinase; 71.2 14 0.00049 29.1 7.0 35 37-74 244-278 (464)
213 3mc3_A DSRE/DSRF-like family p 71.0 5.9 0.0002 25.3 4.1 22 77-98 74-95 (134)
214 2a8x_A Dihydrolipoyl dehydroge 70.9 17 0.00059 27.1 7.3 54 39-95 170-230 (464)
215 1gpj_A Glutamyl-tRNA reductase 70.8 6 0.0002 29.8 4.7 37 35-74 162-199 (404)
216 3klj_A NAD(FAD)-dependent dehy 70.5 7 0.00024 29.0 5.0 53 40-95 146-206 (385)
217 3d64_A Adenosylhomocysteinase; 70.4 25 0.00087 27.6 8.3 60 32-93 64-126 (494)
218 1ges_A Glutathione reductase; 70.3 14 0.00048 27.7 6.7 53 40-95 167-226 (450)
219 1hyu_A AHPF, alkyl hydroperoxi 70.2 9 0.00031 29.5 5.7 54 38-94 353-408 (521)
220 4imr_A 3-oxoacyl-(acyl-carrier 70.1 22 0.00075 24.8 7.3 57 36-95 29-85 (275)
221 3icc_A Putative 3-oxoacyl-(acy 69.9 9.9 0.00034 25.7 5.4 34 38-73 5-38 (255)
222 3ezl_A Acetoacetyl-COA reducta 69.9 11 0.00037 25.6 5.6 56 37-94 10-65 (256)
223 1v9l_A Glutamate dehydrogenase 69.8 6.3 0.00022 30.5 4.7 37 34-73 203-240 (421)
224 4da9_A Short-chain dehydrogena 69.7 10 0.00034 26.6 5.5 36 36-73 25-60 (280)
225 1ja9_A 4HNR, 1,3,6,8-tetrahydr 69.6 7.4 0.00025 26.5 4.7 36 37-74 18-53 (274)
226 1dxl_A Dihydrolipoamide dehydr 69.5 14 0.00047 27.6 6.5 54 39-95 176-236 (470)
227 2raf_A Putative dinucleotide-b 69.3 7.9 0.00027 26.2 4.7 36 37-75 16-51 (209)
228 3fwz_A Inner membrane protein 69.1 14 0.00049 23.0 5.7 46 41-94 8-53 (140)
229 3dk9_A Grase, GR, glutathione 68.9 21 0.0007 26.8 7.4 52 40-94 187-245 (478)
230 3u5t_A 3-oxoacyl-[acyl-carrier 68.8 10 0.00034 26.5 5.3 35 37-73 24-58 (267)
231 3r1i_A Short-chain type dehydr 68.2 17 0.00059 25.4 6.4 56 36-94 28-83 (276)
232 2qae_A Lipoamide, dihydrolipoy 68.0 25 0.00087 26.2 7.7 54 39-95 173-234 (468)
233 2hk9_A Shikimate dehydrogenase 67.9 5.8 0.0002 28.1 3.9 35 37-74 126-160 (275)
234 3ucx_A Short chain dehydrogena 67.8 16 0.00056 25.1 6.2 36 37-74 8-43 (264)
235 3k92_A NAD-GDH, NAD-specific g 67.7 7.7 0.00026 30.1 4.8 38 33-73 213-251 (424)
236 3rss_A Putative uncharacterize 67.5 19 0.00066 28.2 7.1 63 32-95 44-110 (502)
237 2yfq_A Padgh, NAD-GDH, NAD-spe 67.4 4.1 0.00014 31.5 3.2 39 33-74 204-243 (421)
238 1u7z_A Coenzyme A biosynthesis 67.3 17 0.00057 25.7 6.2 42 36-77 4-60 (226)
239 2r9z_A Glutathione amide reduc 67.3 19 0.00064 27.1 6.8 53 40-95 166-225 (463)
240 1qop_B Tryptophan synthase bet 67.2 3.1 0.0001 31.2 2.4 44 54-98 114-159 (396)
241 1xdi_A RV3303C-LPDA; reductase 67.2 18 0.00062 27.4 6.8 53 40-95 182-241 (499)
242 2d5c_A AROE, shikimate 5-dehyd 67.0 7.1 0.00024 27.3 4.2 34 37-74 114-147 (263)
243 4gkb_A 3-oxoacyl-[acyl-carrier 67.0 24 0.00084 24.9 7.1 53 37-93 4-56 (258)
244 1g0o_A Trihydroxynaphthalene r 66.9 8.9 0.0003 26.7 4.7 36 37-74 26-61 (283)
245 1h5q_A NADP-dependent mannitol 66.7 17 0.00057 24.6 6.0 36 37-74 11-46 (265)
246 2hqm_A GR, grase, glutathione 66.7 19 0.00065 27.2 6.8 54 39-95 184-244 (479)
247 3oj0_A Glutr, glutamyl-tRNA re 66.7 5.7 0.00019 25.0 3.3 33 39-74 20-52 (144)
248 2xdq_A Light-independent proto 66.7 5.8 0.0002 30.2 3.9 35 36-73 313-347 (460)
249 3rkr_A Short chain oxidoreduct 66.6 11 0.00036 26.0 5.0 59 35-96 24-82 (262)
250 2g1u_A Hypothetical protein TM 66.5 10 0.00034 24.1 4.6 35 37-74 16-50 (155)
251 1jzt_A Hypothetical 27.5 kDa p 66.5 18 0.0006 25.7 6.2 54 41-94 60-116 (246)
252 2xdq_B Light-independent proto 66.5 5.1 0.00018 31.2 3.6 36 36-74 299-335 (511)
253 2vhw_A Alanine dehydrogenase; 66.4 8.5 0.00029 28.7 4.7 35 37-74 165-199 (377)
254 3r3s_A Oxidoreductase; structu 66.2 9.7 0.00033 26.9 4.8 37 36-74 45-81 (294)
255 3k30_A Histamine dehydrogenase 65.9 21 0.00072 28.4 7.2 57 38-96 521-586 (690)
256 1lss_A TRK system potassium up 65.9 19 0.00065 21.6 5.9 32 40-74 4-35 (140)
257 3pdi_A Nitrogenase MOFE cofact 65.8 7.1 0.00024 30.4 4.3 35 37-74 329-363 (483)
258 1gee_A Glucose 1-dehydrogenase 65.6 9.2 0.00032 26.0 4.5 36 37-74 4-39 (261)
259 2l17_A Synarsc, arsenate reduc 65.5 14 0.00047 23.6 5.0 51 41-94 5-60 (134)
260 2egg_A AROE, shikimate 5-dehyd 65.3 35 0.0012 24.4 8.3 40 32-74 131-173 (297)
261 2h78_A Hibadh, 3-hydroxyisobut 65.3 31 0.0011 24.1 7.4 44 41-92 4-47 (302)
262 3osu_A 3-oxoacyl-[acyl-carrier 65.2 9.7 0.00033 25.9 4.5 35 38-74 2-36 (246)
263 4g81_D Putative hexonate dehyd 65.1 7.4 0.00025 27.7 4.0 56 37-95 6-61 (255)
264 4e4t_A Phosphoribosylaminoimid 65.0 9.4 0.00032 28.8 4.8 35 38-75 33-67 (419)
265 4eqs_A Coenzyme A disulfide re 65.0 23 0.00079 26.5 6.9 55 39-96 146-207 (437)
266 3lyl_A 3-oxoacyl-(acyl-carrier 65.0 11 0.00037 25.5 4.7 36 37-74 2-37 (247)
267 3qiv_A Short-chain dehydrogena 64.9 15 0.00051 24.9 5.4 36 37-74 6-41 (253)
268 3kd9_A Coenzyme A disulfide re 64.6 24 0.00082 26.2 6.9 47 37-86 145-195 (449)
269 3pgx_A Carveol dehydrogenase; 64.6 18 0.00061 25.1 5.9 36 36-73 11-46 (280)
270 1x1q_A Tryptophan synthase bet 64.5 4.9 0.00017 30.5 3.1 46 53-98 136-182 (418)
271 3sc4_A Short chain dehydrogena 64.4 33 0.0011 23.9 7.5 37 37-75 6-42 (285)
272 1ojt_A Surface protein; redox- 63.6 16 0.00056 27.5 5.9 52 40-94 185-243 (482)
273 2uvd_A 3-oxoacyl-(acyl-carrier 63.6 12 0.0004 25.5 4.7 35 38-74 2-36 (246)
274 1e5x_A Threonine synthase; thr 63.0 10 0.00035 29.5 4.7 47 50-97 191-237 (486)
275 3urh_A Dihydrolipoyl dehydroge 63.0 20 0.00067 27.1 6.2 54 39-95 197-257 (491)
276 3lad_A Dihydrolipoamide dehydr 62.8 19 0.00065 26.9 6.1 54 39-95 179-239 (476)
277 3qlj_A Short chain dehydrogena 62.6 23 0.0008 25.1 6.3 36 36-73 23-58 (322)
278 3e03_A Short chain dehydrogena 62.5 35 0.0012 23.5 7.3 36 37-74 3-38 (274)
279 3dgh_A TRXR-1, thioredoxin red 62.5 25 0.00084 26.5 6.7 53 40-95 187-245 (483)
280 1i36_A Conserved hypothetical 62.5 22 0.00076 24.3 6.0 45 42-92 2-46 (264)
281 1y81_A Conserved hypothetical 62.5 23 0.00079 22.6 5.7 38 38-75 12-50 (138)
282 3v2h_A D-beta-hydroxybutyrate 62.3 17 0.0006 25.3 5.5 38 35-74 20-57 (281)
283 1gte_A Dihydropyrimidine dehyd 62.3 30 0.001 29.1 7.7 53 40-95 332-388 (1025)
284 4hb9_A Similarities with proba 61.8 9.9 0.00034 27.1 4.2 29 41-72 2-30 (412)
285 3ggo_A Prephenate dehydrogenas 61.8 19 0.00064 26.1 5.7 44 41-92 34-79 (314)
286 4e3z_A Putative oxidoreductase 61.7 13 0.00043 25.7 4.6 57 38-96 24-80 (272)
287 2g5c_A Prephenate dehydrogenas 61.7 20 0.00069 24.8 5.7 44 41-92 2-47 (281)
288 3awd_A GOX2181, putative polyo 61.6 18 0.0006 24.4 5.3 36 37-74 10-45 (260)
289 4fs3_A Enoyl-[acyl-carrier-pro 61.2 17 0.00059 25.1 5.3 38 37-74 3-40 (256)
290 3aek_B Light-independent proto 60.7 7.6 0.00026 30.5 3.6 36 36-74 276-312 (525)
291 3gdg_A Probable NADP-dependent 60.5 18 0.0006 24.7 5.2 39 36-74 16-54 (267)
292 3tjr_A Short chain dehydrogena 60.4 18 0.00061 25.6 5.3 37 36-74 27-63 (301)
293 2gi4_A Possible phosphotyrosin 60.3 26 0.0009 22.9 5.8 54 42-95 3-67 (156)
294 2wpf_A Trypanothione reductase 60.3 30 0.001 26.3 6.9 54 40-96 191-254 (495)
295 1yb1_A 17-beta-hydroxysteroid 59.9 19 0.00065 24.8 5.3 37 36-74 27-63 (272)
296 3pef_A 6-phosphogluconate dehy 59.9 15 0.00051 25.7 4.8 31 41-74 2-32 (287)
297 3ctm_A Carbonyl reductase; alc 59.8 32 0.0011 23.5 6.5 37 36-74 30-66 (279)
298 2eez_A Alanine dehydrogenase; 59.7 13 0.00045 27.4 4.6 35 37-74 163-197 (369)
299 2o8n_A APOA-I binding protein; 59.5 19 0.00065 26.0 5.4 53 41-94 81-136 (265)
300 4fc7_A Peroxisomal 2,4-dienoyl 59.1 12 0.00043 26.0 4.2 36 37-74 24-59 (277)
301 2hmt_A YUAA protein; RCK, KTN, 58.9 7.6 0.00026 23.6 2.8 35 37-74 3-37 (144)
302 2d59_A Hypothetical protein PH 58.8 27 0.00094 22.2 5.6 37 40-76 22-59 (144)
303 3cky_A 2-hydroxymethyl glutara 58.8 38 0.0013 23.5 6.8 32 40-74 4-35 (301)
304 3l6d_A Putative oxidoreductase 58.7 19 0.00066 25.6 5.3 47 38-92 7-53 (306)
305 1mio_A Nitrogenase molybdenum 58.4 9.3 0.00032 30.2 3.8 34 37-73 332-365 (533)
306 3l8k_A Dihydrolipoyl dehydroge 58.4 33 0.0011 25.7 6.8 47 40-89 172-222 (466)
307 2ioj_A Hypothetical protein AF 58.3 25 0.00086 22.2 5.3 56 32-94 45-101 (139)
308 2o2e_A Tryptophan synthase bet 58.3 8.3 0.00028 29.4 3.4 52 43-98 133-186 (422)
309 3g0o_A 3-hydroxyisobutyrate de 58.2 36 0.0012 24.0 6.7 46 40-93 7-52 (303)
310 3d3k_A Enhancer of mRNA-decapp 58.1 20 0.0007 25.5 5.3 54 41-94 87-143 (259)
311 3ktd_A Prephenate dehydrogenas 57.8 15 0.0005 27.3 4.6 44 41-92 9-52 (341)
312 3o0h_A Glutathione reductase; 57.7 40 0.0014 25.3 7.2 53 40-95 191-250 (484)
313 3kkj_A Amine oxidase, flavin-c 57.6 11 0.00039 23.8 3.5 28 42-72 4-31 (336)
314 3ek2_A Enoyl-(acyl-carrier-pro 57.6 30 0.001 23.4 5.9 39 36-74 10-48 (271)
315 3u7q_A Nitrogenase molybdenum- 57.4 8.7 0.0003 30.0 3.4 35 37-74 345-379 (492)
316 3u7q_B Nitrogenase molybdenum- 57.4 7.8 0.00027 30.6 3.2 34 37-73 361-394 (523)
317 4dna_A Probable glutathione re 57.4 30 0.001 25.8 6.4 53 40-95 170-229 (463)
318 2o0b_A 3-phosphoshikimate 1-ca 57.2 19 0.00064 27.7 5.3 84 7-97 200-287 (450)
319 2zat_A Dehydrogenase/reductase 57.0 19 0.00064 24.6 4.8 38 35-74 9-46 (260)
320 3gk3_A Acetoacetyl-COA reducta 56.9 12 0.00042 25.8 3.9 34 38-73 23-56 (269)
321 3d3j_A Enhancer of mRNA-decapp 56.5 24 0.00082 25.9 5.6 54 41-94 134-190 (306)
322 1fec_A Trypanothione reductase 56.5 29 0.00098 26.3 6.2 53 40-95 187-249 (490)
323 3tsc_A Putative oxidoreductase 56.3 27 0.00093 24.1 5.6 36 36-73 7-42 (277)
324 1mio_B Nitrogenase molybdenum 56.2 13 0.00046 28.4 4.3 35 37-74 309-343 (458)
325 2ywl_A Thioredoxin reductase r 56.1 36 0.0012 21.5 6.4 31 42-75 3-33 (180)
326 3t7c_A Carveol dehydrogenase; 56.1 27 0.00091 24.5 5.6 37 36-74 24-60 (299)
327 3aek_A Light-independent proto 56.0 12 0.0004 28.6 3.9 35 37-74 304-339 (437)
328 1vb3_A Threonine synthase; PLP 55.7 24 0.00082 26.8 5.6 43 51-94 134-177 (428)
329 1qgu_B Protein (nitrogenase mo 55.6 16 0.00056 28.6 4.8 36 36-74 356-391 (519)
330 3pdi_B Nitrogenase MOFE cofact 55.6 8.4 0.00029 29.7 3.0 35 36-73 309-343 (458)
331 2gf2_A Hibadh, 3-hydroxyisobut 55.4 35 0.0012 23.6 6.1 30 42-74 2-31 (296)
332 3fbt_A Chorismate mutase and s 55.3 24 0.00083 25.5 5.4 35 37-74 119-154 (282)
333 3doj_A AT3G25530, dehydrogenas 55.2 30 0.001 24.6 5.8 34 38-74 19-52 (310)
334 3pdu_A 3-hydroxyisobutyrate de 55.2 17 0.00057 25.5 4.4 31 41-74 2-32 (287)
335 4ibo_A Gluconate dehydrogenase 55.1 14 0.00049 25.7 4.0 37 36-74 22-58 (271)
336 3gaf_A 7-alpha-hydroxysteroid 54.9 17 0.0006 24.9 4.4 36 37-74 9-44 (256)
337 3jyo_A Quinate/shikimate dehyd 54.8 24 0.00081 25.4 5.2 36 36-74 123-159 (283)
338 4g63_A Cytosolic IMP-GMP speci 54.7 26 0.00088 27.5 5.7 36 36-75 291-326 (470)
339 1p8a_A Protein tyrosine phosph 54.6 35 0.0012 21.9 5.6 55 41-95 5-65 (146)
340 3oid_A Enoyl-[acyl-carrier-pro 54.2 19 0.00066 24.7 4.5 32 39-72 3-34 (258)
341 4e21_A 6-phosphogluconate dehy 54.1 36 0.0012 25.2 6.2 46 38-91 20-65 (358)
342 2gk4_A Conserved hypothetical 53.9 22 0.00075 25.2 4.8 28 46-73 23-50 (232)
343 4e12_A Diketoreductase; oxidor 53.2 20 0.00067 25.3 4.5 31 41-74 5-35 (283)
344 2gag_A Heterotetrameric sarcos 53.0 19 0.00065 30.2 4.9 54 37-95 281-334 (965)
345 3ab1_A Ferredoxin--NADP reduct 52.7 13 0.00046 26.3 3.6 36 38-76 161-196 (360)
346 2ew2_A 2-dehydropantoate 2-red 52.6 40 0.0014 23.2 6.0 45 41-93 4-48 (316)
347 2duw_A Putative COA-binding pr 52.5 21 0.00071 22.9 4.2 37 40-76 13-50 (145)
348 1d1q_A Tyrosine phosphatase (E 52.4 38 0.0013 22.1 5.6 57 39-95 6-74 (161)
349 1nyt_A Shikimate 5-dehydrogena 52.3 30 0.001 24.3 5.3 35 37-74 116-150 (271)
350 3qsg_A NAD-binding phosphogluc 52.2 34 0.0012 24.4 5.7 47 40-92 24-71 (312)
351 4b1b_A TRXR, thioredoxin reduc 52.1 33 0.0011 26.9 6.0 52 41-95 224-281 (542)
352 2jah_A Clavulanic acid dehydro 51.9 32 0.0011 23.3 5.3 36 37-74 4-39 (247)
353 3e8x_A Putative NAD-dependent 51.9 19 0.00067 23.9 4.2 40 33-74 14-53 (236)
354 3imf_A Short chain dehydrogena 51.8 17 0.00057 24.9 3.9 36 37-74 3-38 (257)
355 3rd5_A Mypaa.01249.C; ssgcid, 51.7 23 0.00079 24.6 4.6 38 35-74 11-48 (291)
356 4a8t_A Putrescine carbamoyltra 51.6 38 0.0013 25.3 6.0 43 37-79 60-102 (339)
357 3s55_A Putative short-chain de 51.3 36 0.0012 23.4 5.6 37 36-74 6-42 (281)
358 3vtz_A Glucose 1-dehydrogenase 51.2 18 0.00063 25.1 4.0 39 34-74 8-46 (269)
359 4h15_A Short chain alcohol deh 51.1 17 0.00059 25.6 3.9 36 37-74 8-43 (261)
360 2rhc_B Actinorhodin polyketide 50.7 33 0.0011 23.7 5.3 36 37-74 19-54 (277)
361 3rh0_A Arsenate reductase; oxi 50.6 48 0.0017 21.6 5.8 52 40-94 20-77 (148)
362 1vlv_A Otcase, ornithine carba 50.6 39 0.0013 25.1 5.9 43 37-79 55-97 (325)
363 1dxh_A Ornithine carbamoyltran 50.5 36 0.0012 25.4 5.7 42 38-79 43-84 (335)
364 3hwr_A 2-dehydropantoate 2-red 50.2 43 0.0015 23.9 6.0 47 38-93 17-63 (318)
365 1e7w_A Pteridine reductase; di 50.1 23 0.00079 24.8 4.5 36 36-73 5-40 (291)
366 3rih_A Short chain dehydrogena 50.0 38 0.0013 23.9 5.6 37 36-74 37-73 (293)
367 1zem_A Xylitol dehydrogenase; 49.9 32 0.0011 23.4 5.1 36 37-74 4-39 (262)
368 1ae1_A Tropinone reductase-I; 49.9 35 0.0012 23.5 5.3 36 37-74 18-53 (273)
369 3don_A Shikimate dehydrogenase 49.9 13 0.00046 26.7 3.2 36 36-74 113-149 (277)
370 3n8i_A Low molecular weight ph 49.8 41 0.0014 22.0 5.4 55 40-94 5-70 (157)
371 1duv_G Octase-1, ornithine tra 49.7 38 0.0013 25.2 5.8 43 37-79 41-83 (333)
372 1t57_A Conserved protein MTH16 49.5 20 0.00068 25.4 3.9 39 54-95 64-109 (206)
373 3pwz_A Shikimate dehydrogenase 49.4 27 0.00094 24.9 4.8 35 37-74 117-152 (272)
374 1vl8_A Gluconate 5-dehydrogena 49.3 26 0.0009 24.2 4.6 40 33-74 14-53 (267)
375 3vrd_B FCCB subunit, flavocyto 49.3 23 0.00079 25.6 4.5 36 39-77 1-38 (401)
376 2x8g_A Thioredoxin glutathione 49.2 52 0.0018 25.4 6.7 54 39-95 285-344 (598)
377 1fmc_A 7 alpha-hydroxysteroid 49.2 26 0.00089 23.4 4.5 36 37-74 8-43 (255)
378 3rwb_A TPLDH, pyridoxal 4-dehy 48.9 32 0.0011 23.3 5.0 36 37-74 3-38 (247)
379 2g0t_A Conserved hypothetical 48.8 50 0.0017 24.8 6.3 56 40-95 89-148 (350)
380 1iow_A DD-ligase, DDLB, D-ALA\ 48.7 41 0.0014 23.1 5.6 36 41-76 3-44 (306)
381 2w37_A Ornithine carbamoyltran 48.7 43 0.0015 25.3 5.9 42 38-79 65-106 (359)
382 3sds_A Ornithine carbamoyltran 48.7 57 0.0019 24.5 6.6 44 37-80 63-106 (353)
383 3lmz_A Putative sugar isomeras 48.6 59 0.002 21.9 7.0 92 4-97 29-132 (257)
384 4eso_A Putative oxidoreductase 48.5 27 0.00094 23.9 4.6 37 36-74 4-40 (255)
385 3f1l_A Uncharacterized oxidore 48.4 28 0.00097 23.7 4.6 37 36-74 8-44 (252)
386 3dgz_A Thioredoxin reductase 2 48.4 54 0.0018 24.6 6.5 53 40-95 185-243 (488)
387 2xve_A Flavin-containing monoo 48.2 33 0.0011 25.8 5.3 35 38-75 195-229 (464)
388 3tnl_A Shikimate dehydrogenase 48.1 31 0.0011 25.3 5.0 37 36-75 150-187 (315)
389 3qfa_A Thioredoxin reductase 1 48.0 54 0.0018 25.0 6.5 53 40-95 210-268 (519)
390 3l4e_A Uncharacterized peptida 48.0 63 0.0022 22.0 6.7 41 33-73 19-64 (206)
391 2ayx_A Sensor kinase protein R 47.9 15 0.00051 25.2 3.1 35 37-73 8-42 (254)
392 3pxx_A Carveol dehydrogenase; 47.8 32 0.0011 23.6 4.8 36 36-73 6-41 (287)
393 1o5i_A 3-oxoacyl-(acyl carrier 47.8 28 0.00097 23.7 4.5 38 35-74 14-51 (249)
394 1yxm_A Pecra, peroxisomal tran 47.8 28 0.00096 24.1 4.6 37 36-74 14-50 (303)
395 3ic9_A Dihydrolipoamide dehydr 47.8 65 0.0022 24.4 6.9 44 40-86 174-220 (492)
396 1iuk_A Hypothetical protein TT 47.7 36 0.0012 21.6 4.8 37 39-75 12-49 (140)
397 1nvt_A Shikimate 5'-dehydrogen 47.5 25 0.00086 24.8 4.3 35 36-74 124-158 (287)
398 3pnx_A Putative sulfurtransfer 47.4 53 0.0018 21.8 5.7 18 81-98 105-122 (160)
399 4etn_A LMPTP, low molecular we 47.4 39 0.0013 22.9 5.1 56 40-95 34-97 (184)
400 1p77_A Shikimate 5-dehydrogena 47.3 19 0.00065 25.4 3.6 35 37-74 116-150 (272)
401 2c07_A 3-oxoacyl-(acyl-carrier 47.1 26 0.00089 24.3 4.3 36 36-73 40-75 (285)
402 4ffl_A PYLC; amino acid, biosy 47.1 29 0.001 24.9 4.7 31 41-74 2-32 (363)
403 3n74_A 3-ketoacyl-(acyl-carrie 47.0 29 0.001 23.4 4.5 36 37-74 6-41 (261)
404 3tpf_A Otcase, ornithine carba 47.0 49 0.0017 24.3 5.9 43 37-79 33-75 (307)
405 2dpo_A L-gulonate 3-dehydrogen 47.0 24 0.00081 25.8 4.2 32 40-74 6-37 (319)
406 3uve_A Carveol dehydrogenase ( 46.9 34 0.0012 23.6 4.9 36 36-73 7-42 (286)
407 3qha_A Putative oxidoreductase 46.9 31 0.0011 24.3 4.8 31 41-74 16-46 (296)
408 1id1_A Putative potassium chan 46.9 22 0.00074 22.3 3.6 33 40-75 3-35 (153)
409 2vdc_G Glutamate synthase [NAD 46.6 59 0.002 24.6 6.5 54 39-95 121-190 (456)
410 3ic5_A Putative saccharopine d 46.6 40 0.0014 19.4 6.5 33 39-74 4-37 (118)
411 1oth_A Protein (ornithine tran 46.5 41 0.0014 24.9 5.5 43 37-79 43-85 (321)
412 2wsb_A Galactitol dehydrogenas 46.5 31 0.0011 23.1 4.5 36 37-74 8-43 (254)
413 2pv7_A T-protein [includes: ch 46.4 21 0.00072 25.3 3.8 32 41-75 22-54 (298)
414 3d3w_A L-xylulose reductase; u 46.3 32 0.0011 22.9 4.5 36 37-74 4-39 (244)
415 4egf_A L-xylulose reductase; s 46.3 21 0.00071 24.6 3.7 37 36-74 16-52 (266)
416 3tri_A Pyrroline-5-carboxylate 46.2 55 0.0019 23.0 6.0 32 40-74 3-37 (280)
417 3o8q_A Shikimate 5-dehydrogena 46.2 30 0.001 24.8 4.6 35 37-74 123-158 (281)
418 1cyd_A Carbonyl reductase; sho 46.2 34 0.0011 22.7 4.6 36 37-74 4-39 (244)
419 3obb_A Probable 3-hydroxyisobu 46.0 75 0.0026 22.7 6.8 45 41-93 4-48 (300)
420 3sx2_A Putative 3-ketoacyl-(ac 46.0 36 0.0012 23.3 4.9 36 36-73 9-44 (278)
421 3hn2_A 2-dehydropantoate 2-red 45.6 54 0.0019 23.2 5.9 44 41-94 3-46 (312)
422 3v8b_A Putative dehydrogenase, 45.6 32 0.0011 24.0 4.6 37 36-74 24-60 (283)
423 1pjc_A Protein (L-alanine dehy 45.4 32 0.0011 25.3 4.7 34 38-74 165-198 (361)
424 3tpc_A Short chain alcohol deh 45.4 33 0.0011 23.3 4.5 36 37-74 4-39 (257)
425 2pke_A Haloacid delahogenase-l 45.3 37 0.0013 22.4 4.7 53 14-73 150-207 (251)
426 2h7i_A Enoyl-[acyl-carrier-pro 45.2 38 0.0013 23.2 4.9 36 37-74 4-41 (269)
427 1vpd_A Tartronate semialdehyde 45.2 73 0.0025 22.0 7.3 44 41-92 6-49 (299)
428 4fgs_A Probable dehydrogenase 45.1 32 0.0011 24.6 4.6 36 37-74 26-61 (273)
429 3b3e_A YVGN protein; aldo-keto 45.1 37 0.0013 24.5 5.0 90 6-97 127-223 (310)
430 2a4k_A 3-oxoacyl-[acyl carrier 45.0 34 0.0012 23.6 4.6 37 36-74 2-38 (263)
431 2x9g_A PTR1, pteridine reducta 44.8 26 0.00089 24.3 4.0 37 36-74 19-55 (288)
432 3oig_A Enoyl-[acyl-carrier-pro 44.7 70 0.0024 21.6 6.6 38 37-74 4-41 (266)
433 1zk4_A R-specific alcohol dehy 44.7 26 0.00088 23.4 3.9 36 37-74 3-38 (251)
434 2f1k_A Prephenate dehydrogenas 44.7 32 0.0011 23.6 4.5 43 42-92 2-44 (279)
435 3r89_A Orotidine 5'-phosphate 44.7 24 0.00082 25.9 3.9 46 47-94 102-150 (290)
436 1mxh_A Pteridine reductase 2; 44.6 26 0.00088 24.0 3.9 36 37-74 8-43 (276)
437 1u2p_A Ptpase, low molecular w 44.5 62 0.0021 21.0 5.6 55 41-95 5-70 (163)
438 3sho_A Transcriptional regulat 44.4 43 0.0015 21.6 4.8 33 41-73 40-72 (187)
439 3p6l_A Sugar phosphate isomera 44.4 70 0.0024 21.5 8.8 92 4-97 21-134 (262)
440 2et6_A (3R)-hydroxyacyl-COA de 44.4 97 0.0033 24.5 7.7 54 37-95 319-372 (604)
441 3grp_A 3-oxoacyl-(acyl carrier 44.3 66 0.0022 22.1 6.1 36 37-74 24-59 (266)
442 3u62_A Shikimate dehydrogenase 44.3 24 0.0008 24.9 3.7 34 37-74 106-140 (253)
443 1f0y_A HCDH, L-3-hydroxyacyl-C 44.2 33 0.0011 24.1 4.6 31 41-74 16-46 (302)
444 3i83_A 2-dehydropantoate 2-red 44.2 39 0.0014 24.0 5.0 33 41-76 3-35 (320)
445 3ioy_A Short-chain dehydrogena 44.2 44 0.0015 23.8 5.2 36 37-74 5-40 (319)
446 3ppi_A 3-hydroxyacyl-COA dehyd 44.2 29 0.00098 23.9 4.1 37 36-74 26-62 (281)
447 3l77_A Short-chain alcohol deh 44.1 31 0.0011 22.9 4.2 34 39-74 1-34 (235)
448 1qsg_A Enoyl-[acyl-carrier-pro 44.1 72 0.0025 21.6 6.3 37 38-74 7-43 (265)
449 3f7j_A YVGN protein; aldo-keto 44.1 42 0.0014 23.7 5.1 90 6-97 93-189 (276)
450 1sny_A Sniffer CG10964-PA; alp 44.0 64 0.0022 21.7 5.9 38 36-75 17-57 (267)
451 2a5l_A Trp repressor binding p 43.9 43 0.0015 21.6 4.8 34 37-70 105-143 (200)
452 1m6i_A Programmed cell death p 43.9 23 0.00078 27.0 3.8 53 40-95 180-244 (493)
453 3tfo_A Putative 3-oxoacyl-(acy 43.6 38 0.0013 23.5 4.7 35 38-74 2-36 (264)
454 3e5y_A TRMH family RNA methylt 43.5 31 0.001 22.6 4.0 28 55-82 19-46 (160)
455 3n4j_A RNA methyltransferase; 43.5 31 0.0011 22.7 4.0 29 55-83 18-46 (165)
456 3kty_A Probable methyltransfer 43.3 32 0.0011 22.6 4.1 47 38-85 8-57 (173)
457 3tzq_B Short-chain type dehydr 43.2 36 0.0012 23.5 4.5 36 37-74 8-43 (271)
458 2pd4_A Enoyl-[acyl-carrier-pro 43.1 77 0.0026 21.6 7.2 38 37-74 3-40 (275)
459 3i1j_A Oxidoreductase, short c 43.1 30 0.001 23.1 4.0 37 36-74 10-46 (247)
460 3sju_A Keto reductase; short-c 43.0 40 0.0014 23.4 4.8 35 38-74 22-56 (279)
461 2cdc_A Glucose dehydrogenase g 42.9 60 0.0021 23.4 5.9 49 40-93 181-229 (366)
462 3t4e_A Quinate/shikimate dehyd 42.9 42 0.0014 24.5 5.0 36 36-74 144-180 (312)
463 1hdc_A 3-alpha, 20 beta-hydrox 42.9 37 0.0013 23.1 4.5 36 37-74 2-37 (254)
464 3svt_A Short-chain type dehydr 42.9 36 0.0012 23.5 4.5 36 37-74 8-43 (281)
465 1edo_A Beta-keto acyl carrier 42.8 32 0.0011 22.9 4.1 31 40-72 1-31 (244)
466 3lf2_A Short chain oxidoreduct 42.8 37 0.0013 23.3 4.5 36 37-74 5-40 (265)
467 4h31_A Otcase, ornithine carba 42.7 56 0.0019 24.5 5.8 45 36-80 66-110 (358)
468 2o23_A HADH2 protein; HSD17B10 42.6 38 0.0013 22.8 4.5 36 37-74 9-44 (265)
469 3f9i_A 3-oxoacyl-[acyl-carrier 42.6 28 0.00095 23.4 3.8 37 36-74 10-46 (249)
470 3i4f_A 3-oxoacyl-[acyl-carrier 42.6 20 0.00068 24.4 3.0 34 38-73 5-38 (264)
471 1pg5_A Aspartate carbamoyltran 42.6 44 0.0015 24.5 5.1 40 37-76 35-74 (299)
472 1w6u_A 2,4-dienoyl-COA reducta 42.5 37 0.0013 23.4 4.5 36 37-74 23-58 (302)
473 2pd6_A Estradiol 17-beta-dehyd 42.4 40 0.0014 22.6 4.6 36 37-74 4-39 (264)
474 3s2e_A Zinc-containing alcohol 42.4 89 0.003 22.1 7.5 49 38-94 165-213 (340)
475 4gbj_A 6-phosphogluconate dehy 42.4 30 0.001 24.8 4.1 29 41-72 6-34 (297)
476 2ag5_A DHRS6, dehydrogenase/re 42.3 32 0.0011 23.2 4.0 36 37-74 3-38 (246)
477 3o38_A Short chain dehydrogena 42.2 37 0.0013 23.0 4.4 37 36-74 18-55 (266)
478 2dtx_A Glucose 1-dehydrogenase 42.2 33 0.0011 23.6 4.2 36 36-73 4-39 (264)
479 3d1l_A Putative NADP oxidoredu 42.1 21 0.00072 24.5 3.1 34 38-74 8-42 (266)
480 4a8p_A Putrescine carbamoyltra 42.1 50 0.0017 24.9 5.4 43 37-79 38-80 (355)
481 1sjq_A Polypyrimidine tract-bi 42.1 45 0.0015 20.5 4.4 45 34-78 9-55 (105)
482 2d1y_A Hypothetical protein TT 42.0 40 0.0014 22.9 4.6 36 37-74 3-38 (256)
483 1sby_A Alcohol dehydrogenase; 41.9 76 0.0026 21.2 7.1 36 37-74 2-38 (254)
484 2bgk_A Rhizome secoisolaricire 41.7 45 0.0015 22.6 4.8 36 37-74 13-48 (278)
485 1nff_A Putative oxidoreductase 41.5 41 0.0014 23.0 4.6 36 37-74 4-39 (260)
486 4ep1_A Otcase, ornithine carba 41.4 48 0.0016 24.9 5.2 43 36-78 66-108 (340)
487 3mxt_A Pantothenate synthetase 41.2 33 0.0011 25.3 4.1 54 38-95 22-92 (285)
488 1iy8_A Levodione reductase; ox 41.1 41 0.0014 22.9 4.5 36 37-74 10-45 (267)
489 4e6p_A Probable sorbitol dehyd 41.0 41 0.0014 22.9 4.5 36 37-74 5-40 (259)
490 3ff4_A Uncharacterized protein 41.0 44 0.0015 21.0 4.3 37 40-76 4-41 (122)
491 2yjz_A Metalloreductase steap4 47.1 5.7 0.0002 27.0 0.0 36 36-74 15-50 (201)
492 2ef0_A Ornithine carbamoyltran 40.9 40 0.0014 24.8 4.6 43 37-79 42-84 (301)
493 2qhx_A Pteridine reductase 1; 40.8 38 0.0013 24.3 4.5 35 37-73 43-77 (328)
494 3zv4_A CIS-2,3-dihydrobiphenyl 40.8 40 0.0014 23.4 4.5 36 37-74 2-37 (281)
495 3ai3_A NADPH-sorbose reductase 40.8 42 0.0014 22.8 4.5 36 37-74 4-39 (263)
496 3sgv_B Undecaprenyl pyrophosph 40.8 33 0.0011 24.8 4.0 56 41-97 19-110 (253)
497 3ax6_A Phosphoribosylaminoimid 40.7 41 0.0014 24.3 4.7 32 41-75 2-33 (380)
498 2ae2_A Protein (tropinone redu 40.7 42 0.0014 22.8 4.5 36 37-74 6-41 (260)
499 2wyu_A Enoyl-[acyl carrier pro 40.6 48 0.0016 22.5 4.8 38 37-74 5-42 (261)
500 3gvc_A Oxidoreductase, probabl 40.6 39 0.0013 23.6 4.4 36 37-74 26-61 (277)
No 1
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=99.97 E-value=6.7e-31 Score=198.51 Aligned_cols=98 Identities=48% Similarity=0.774 Sum_probs=93.1
Q ss_pred CCCCCCHHHHHHHHhhccCEEEEccCCchhH--------------------------------HHHhcCCCCcEEEEECC
Q psy4411 1 MMMYSNLIDTVAVLSGYADVIVLRHPEPGAV--------------------------------KEEMGRVNGLTITMVGD 48 (99)
Q Consensus 1 ~~~~Es~~Dta~vls~y~D~iv~R~~~~~~~--------------------------------~e~~g~l~g~~i~~vGd 48 (99)
+++|||++|||||||+|+|+||+||+.|+.+ +|++|+++|+||+||||
T Consensus 80 ~~kgEsl~DTarvls~~~D~iviR~~~~~~~~~lA~~~~vPVINag~g~~~HPtQ~LaDl~Ti~e~~g~l~glkva~vGD 159 (306)
T 4ekn_B 80 VAKGESLIDTIRVISGYADIIVLRHPSEGAARLASEYSQVPIINAGDGSNQHPTQTLLDLYTIMREIGRIDGIKIAFVGD 159 (306)
T ss_dssp SSSSCCHHHHHHHHHHHCSEEEEECSSTTHHHHHHHHCSSCEEESCSSSSCCHHHHHHHHHHHHHHHSCSTTCEEEEESC
T ss_pred CCCCCCHHHHHHHHHHhCcEEEEEcCChHHHHHHHHhCCCCEEeCCCCCCcCcHHHHHHHHHHHHHhCCcCCCEEEEEcC
Confidence 4789999999999999999999999999877 78999999999999999
Q ss_pred CCCchhHHHHHHHHhhC-CCEEEEECCCCCCCCHHHHHHHHhcCCeEEEEe
Q psy4411 49 LKNGRTVHSLARLLTLY-DVKLNYVSPPNLGMPESIQEFVASKGKQQEVYE 98 (99)
Q Consensus 49 ~~n~rv~~Sl~~~~~~~-G~~v~~~~P~~~~~~~~~~~~a~~~g~~~~~~~ 98 (99)
++||||+|||+.++++| |++|++++|++|+|++++++.++++|+++++++
T Consensus 160 ~~~~rva~Sl~~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~ 210 (306)
T 4ekn_B 160 LKYGRTVHSLVYALSLFENVEMYFVSPKELRLPKDIIEDLKAKNIKFYEKE 210 (306)
T ss_dssp TTTCHHHHHHHHHHHTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEEES
T ss_pred CCCCcHHHHHHHHHHhcCCCEEEEECCcccccCHHHHHHHHHcCCEEEEEc
Confidence 98889999999999999 999999999999999999999999999998764
No 2
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=99.97 E-value=3.7e-31 Score=200.06 Aligned_cols=98 Identities=48% Similarity=0.730 Sum_probs=92.9
Q ss_pred CCCCCCHHHHHHHHhhccCEEEEccCCchhH--------------------------------HHHhcCCCCcEEEEECC
Q psy4411 1 MMMYSNLIDTVAVLSGYADVIVLRHPEPGAV--------------------------------KEEMGRVNGLTITMVGD 48 (99)
Q Consensus 1 ~~~~Es~~Dta~vls~y~D~iv~R~~~~~~~--------------------------------~e~~g~l~g~~i~~vGd 48 (99)
+++|||++|||||||+|+|+||+||+.|+.+ +|++|+++|+||+||||
T Consensus 84 ~~kgEsl~DTarvls~~~D~iviR~~~~~~~~~la~~~~vPVINag~g~~~HPtQ~LaDl~Ti~e~~g~l~gl~va~vGD 163 (308)
T 1ml4_A 84 VKKGESLRDTIKTVEQYCDVIVIRHPKEGAARLAAEVAEVPVINAGDGSNQHPTQTLLDLYTIKKEFGRIDGLKIGLLGD 163 (308)
T ss_dssp GGGTCCHHHHHHHHTTTCSEEEEEESSTTHHHHHHHTCSSCEEEEEETTSCCHHHHHHHHHHHHHHSSCSSSEEEEEESC
T ss_pred ccCCCCHHHHHHHHHHhCcEEEEecCChhHHHHHHHhCCCCEEeCccCCccCcHHHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 3689999999999999999999999999977 78999999999999999
Q ss_pred CCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCeEEEEe
Q psy4411 49 LKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQQEVYE 98 (99)
Q Consensus 49 ~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~~~~~ 98 (99)
++||||+|||+.++++||++|++++|++|+|++++++.++++|+++++++
T Consensus 164 ~~~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~ 213 (308)
T 1ml4_A 164 LKYGRTVHSLAEALTFYDVELYLISPELLRMPRHIVEELREKGMKVVETT 213 (308)
T ss_dssp TTTCHHHHHHHHHGGGSCEEEEEECCGGGCCCHHHHHHHHHTTCCEEEES
T ss_pred CCcCchHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHcCCeEEEEc
Confidence 98889999999999999999999999999999999999999999988764
No 3
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=99.96 E-value=3.3e-30 Score=195.03 Aligned_cols=98 Identities=40% Similarity=0.681 Sum_probs=92.3
Q ss_pred CCCCCCHHHHHHHHhhccCEEEEccCCchhH---------------------------------HHHhcCCCCcEEEEEC
Q psy4411 1 MMMYSNLIDTVAVLSGYADVIVLRHPEPGAV---------------------------------KEEMGRVNGLTITMVG 47 (99)
Q Consensus 1 ~~~~Es~~Dta~vls~y~D~iv~R~~~~~~~---------------------------------~e~~g~l~g~~i~~vG 47 (99)
+++|||++|||||||+|+|+||+||+.|+.+ +|++|+++|+||+|+|
T Consensus 82 ~~kgEsl~DTarvls~~~D~iviR~~~~~~~~~la~~~~~vPVINag~G~~~HPtQaLaDl~Ti~e~~g~l~gl~va~vG 161 (310)
T 3csu_A 82 GKKGETLADTISVISTYVDAIVMRHPQEGAARLATEFSGNVPVLNAGDGSNQHPTQTLLDLFTIQETQGRLDNLHVAMVG 161 (310)
T ss_dssp CCSHHHHHHHHHHHTTTCSEEEEEESSTTHHHHHHHHCTTCCEEEEEETTSCCHHHHHHHHHHHHHHHSCSSSCEEEEES
T ss_pred hccCCcHHHHHHHHHHhCCEEEEECCChhHHHHHHHhcCCCCEEcCccCCCCCchHHHHHHHHHHHHhCCcCCcEEEEEC
Confidence 4789999999999999999999999988866 7899999999999999
Q ss_pred CCCCchhHHHHHHHHhhC-CCEEEEECCCCCCCCHHHHHHHHhcCCeEEEEe
Q psy4411 48 DLKNGRTVHSLARLLTLY-DVKLNYVSPPNLGMPESIQEFVASKGKQQEVYE 98 (99)
Q Consensus 48 d~~n~rv~~Sl~~~~~~~-G~~v~~~~P~~~~~~~~~~~~a~~~g~~~~~~~ 98 (99)
|++||||+|||+.++++| |++|++++|++|+|++++++.++++|+++++++
T Consensus 162 D~~~~rva~Sl~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~ 213 (310)
T 3csu_A 162 DLKYGRTVHSLTQALAKFDGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHS 213 (310)
T ss_dssp CTTTCHHHHHHHHHHHTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEECS
T ss_pred CCCCCchHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHcCCeEEEEc
Confidence 998889999999999999 999999999999999999999999999987754
No 4
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=99.96 E-value=1.7e-29 Score=190.35 Aligned_cols=95 Identities=34% Similarity=0.501 Sum_probs=86.2
Q ss_pred CCCCCCHHHHHHHHhhccCEEEEccCCchhH--------------------------------HHHhcCCCCcEEEEECC
Q psy4411 1 MMMYSNLIDTVAVLSGYADVIVLRHPEPGAV--------------------------------KEEMGRVNGLTITMVGD 48 (99)
Q Consensus 1 ~~~~Es~~Dta~vls~y~D~iv~R~~~~~~~--------------------------------~e~~g~l~g~~i~~vGd 48 (99)
+++|||++|||||||+|+|+||+||+.|+.+ +|++|+++|+||+|+||
T Consensus 78 ~~kgEsl~DTarvls~~~D~iviR~~~~~~~~~la~~~~vPVINaG~g~~~HPtQ~LaDl~Ti~e~~g~l~gl~va~vGD 157 (299)
T 1pg5_A 78 VAKGENLADTIRMLNNYSDGIVMRHKYDGASRFASEISDIPVINAGDGKHEHPTQAVIDIYTINKHFNTIDGLVFALLGD 157 (299)
T ss_dssp ---CCCHHHHHHHHHHHCSEEEEEESSBTHHHHHHHHCSSCEEEEEETTTBCHHHHHHHHHHHHHHHSCSTTCEEEEEEC
T ss_pred ccCCCCHHHHHHHHHHhCCEEEEeCCChhHHHHHHHhCCCCEEeCCCCCCcCcHHHHHHHHHHHHHhCCcCCcEEEEECC
Confidence 4689999999999999999999999999977 78999999999999999
Q ss_pred CCCchhHHHHHHHHhhC-CCEEEEECCCCCCCCHHHHHHHHhcCCeEEEEe
Q psy4411 49 LKNGRTVHSLARLLTLY-DVKLNYVSPPNLGMPESIQEFVASKGKQQEVYE 98 (99)
Q Consensus 49 ~~n~rv~~Sl~~~~~~~-G~~v~~~~P~~~~~~~~~~~~a~~~g~~~~~~~ 98 (99)
+.||||+|||+.++++| |++|++++|++|+|++++ ++++|+++++++
T Consensus 158 ~~~~rva~Sl~~~~~~~~g~~v~~~~P~~~~~~~~~---~~~~g~~~~~~~ 205 (299)
T 1pg5_A 158 LKYARTVNSLLRILTRFRPKLVYLISPQLLRARKEI---LDELNYPVKEVE 205 (299)
T ss_dssp CSSCHHHHHHHHHGGGSCCSEEEEECCGGGCCCHHH---HTTCCSCEEEES
T ss_pred CCCCchHHHHHHHHHhCCCCEEEEECCchhcCCHHH---HHHcCCeEEEeC
Confidence 98889999999999999 999999999999999887 567888887754
No 5
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=99.96 E-value=2.9e-29 Score=189.63 Aligned_cols=97 Identities=25% Similarity=0.276 Sum_probs=88.6
Q ss_pred CCCCCCHHHHHHHHhhccCEEEEccCCchhH-------------------------------HHHhcCCCCcEEEEECCC
Q psy4411 1 MMMYSNLIDTVAVLSGYADVIVLRHPEPGAV-------------------------------KEEMGRVNGLTITMVGDL 49 (99)
Q Consensus 1 ~~~~Es~~Dta~vls~y~D~iv~R~~~~~~~-------------------------------~e~~g~l~g~~i~~vGd~ 49 (99)
+++|||++|||||||+|+|+||+||+.|+.+ +|++|+++|+||+|+||+
T Consensus 78 ~~kgEsl~DTarvls~~~D~iviR~~~~~~~~~lA~~~~vPVINa~~~~~HPtQaLaDl~Ti~e~~g~l~gl~va~vGD~ 157 (307)
T 2i6u_A 78 LGRDETLQDTAKVLSRYVDAIVWRTFGQERLDAMASVATVPVINALSDEFHPCQVLADLQTIAERKGALRGLRLSYFGDG 157 (307)
T ss_dssp GGGTCCHHHHHHHHHHHEEEEEEECSSHHHHHHHHHHCSSCEEESCCSSCCHHHHHHHHHHHHHHHSCCTTCEEEEESCT
T ss_pred CCCCCCHHHHHHHHHHhCCEEEEecCChhHHHHHHhhCCCCEEcCCCCCcCccHHHHHHHHHHHHhCCcCCeEEEEECCC
Confidence 3689999999999999999999999999977 789999999999999998
Q ss_pred CCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHH----hcCCeEEEEe
Q psy4411 50 KNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVA----SKGKQQEVYE 98 (99)
Q Consensus 50 ~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~----~~g~~~~~~~ 98 (99)
++||+|||+.++++||++|++++|++|+|+++++++++ ++|+++++++
T Consensus 158 -~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~ 209 (307)
T 2i6u_A 158 -ANNMAHSLLLGGVTAGIHVTVAAPEGFLPDPSVRAAAERRAQDTGASVTVTA 209 (307)
T ss_dssp -TSHHHHHHHHHHHHTTCEEEEECCTTSCCCHHHHHHHHHHHHHHTCCEEEES
T ss_pred -CcCcHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEE
Confidence 34899999999999999999999999999998877665 7888888764
No 6
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=99.96 E-value=3.9e-29 Score=190.17 Aligned_cols=97 Identities=20% Similarity=0.279 Sum_probs=88.8
Q ss_pred CCCCCCHHHHHHHHhhccCEEEEccCCchhH-------------------------------HHHhcCCCCcEEEEECCC
Q psy4411 1 MMMYSNLIDTVAVLSGYADVIVLRHPEPGAV-------------------------------KEEMGRVNGLTITMVGDL 49 (99)
Q Consensus 1 ~~~~Es~~Dta~vls~y~D~iv~R~~~~~~~-------------------------------~e~~g~l~g~~i~~vGd~ 49 (99)
+++|||++|||||||+|+|+||+||+.++.+ +|++|+++|+||+|+||+
T Consensus 97 ~~kgEsl~DTarvLs~~~D~iviR~~~~~~~~~lA~~~~vPVINa~~~~~HPtQaLaDl~Ti~e~~g~l~gl~va~vGD~ 176 (325)
T 1vlv_A 97 LGAKESLEDTARVLGRMVDAIMFRGYKQETVEKLAEYSGVPVYNGLTDEFHPTQALADLMTIEENFGRLKGVKVVFMGDT 176 (325)
T ss_dssp TTTSSCHHHHHHHHHTTCSEEEEESSCHHHHHHHHHHHCSCEEESCCSSCCHHHHHHHHHHHHHHHSCSTTCEEEEESCT
T ss_pred CCCCcCHHHHHHHHHHhCCEEEEECCChHHHHHHHHhCCCCEEeCCCCCCCcHHHHHHHHHHHHHhCCcCCcEEEEECCC
Confidence 4789999999999999999999999999877 789999999999999997
Q ss_pred CCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHH----hcCCeEEEEe
Q psy4411 50 KNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVA----SKGKQQEVYE 98 (99)
Q Consensus 50 ~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~----~~g~~~~~~~ 98 (99)
. +||+|||+.++++||++|++++|++|+|+++++++++ ++|+++++++
T Consensus 177 ~-~rva~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~ 228 (325)
T 1vlv_A 177 R-NNVATSLMIACAKMGMNFVACGPEELKPRSDVFKRCQEIVKETDGSVSFTS 228 (325)
T ss_dssp T-SHHHHHHHHHHHHTTCEEEEESCGGGCCCHHHHHHHHHHHHHHCCEEEEES
T ss_pred C-cCcHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEc
Confidence 3 3899999999999999999999999999998876665 7898888764
No 7
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=99.96 E-value=4.6e-29 Score=189.10 Aligned_cols=96 Identities=25% Similarity=0.328 Sum_probs=88.4
Q ss_pred CCCCCCHHHHHHHHhhccCEEEEccCCchhH-------------------------------HHHhcCCCCcEEEEECCC
Q psy4411 1 MMMYSNLIDTVAVLSGYADVIVLRHPEPGAV-------------------------------KEEMGRVNGLTITMVGDL 49 (99)
Q Consensus 1 ~~~~Es~~Dta~vls~y~D~iv~R~~~~~~~-------------------------------~e~~g~l~g~~i~~vGd~ 49 (99)
+++|||++|||||||+|+|+||+||+.|+.+ +|++|+++|+||+|+||+
T Consensus 85 ~~kgEsl~DTarvls~~~D~iviR~~~~~~~~~lA~~~~vPVINa~~~~~HPtQaLaDl~Ti~e~~g~l~gl~va~vGD~ 164 (315)
T 1pvv_A 85 LRRGETIADTARVLSRYVDAIMARVYDHKDVEDLAKYATVPVINGLSDFSHPCQALADYMTIWEKKGTIKGVKVVYVGDG 164 (315)
T ss_dssp TTTTCCHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHCSSCEEEEECSSCCHHHHHHHHHHHHHHHSCCTTCEEEEESCC
T ss_pred CCCCcCHHHHHHHHHHhCcEEEEecCchHHHHHHHHhCCCCEEcCCCCCCCcHHHHHHHHHHHHHhCCcCCcEEEEECCC
Confidence 4789999999999999999999999999977 789999999999999998
Q ss_pred CCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHH----hcCCeEEEEe
Q psy4411 50 KNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVA----SKGKQQEVYE 98 (99)
Q Consensus 50 ~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~----~~g~~~~~~~ 98 (99)
+ ||+|||+.++++||++|++++|++|+|+++++++++ ++|+++++++
T Consensus 165 ~--rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~ 215 (315)
T 1pvv_A 165 N--NVAHSLMIAGTKLGADVVVATPEGYEPDEKVIKWAEQNAAESGGSFELLH 215 (315)
T ss_dssp C--HHHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEES
T ss_pred c--chHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEe
Confidence 3 799999999999999999999999999998876665 7898888764
No 8
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=99.96 E-value=4.8e-29 Score=188.46 Aligned_cols=96 Identities=18% Similarity=0.219 Sum_probs=88.4
Q ss_pred CCCCCCHHHHHHHHhhccCEEEEccCCchhH-------------------------------HHHhcCCC-CcEEEEECC
Q psy4411 1 MMMYSNLIDTVAVLSGYADVIVLRHPEPGAV-------------------------------KEEMGRVN-GLTITMVGD 48 (99)
Q Consensus 1 ~~~~Es~~Dta~vls~y~D~iv~R~~~~~~~-------------------------------~e~~g~l~-g~~i~~vGd 48 (99)
+++|||++|||||||+|+|+||+||+.|+.+ +|++|+++ |+||+||||
T Consensus 75 ~~kgEsl~DTarvls~~~D~iviR~~~~~~~~~lA~~~~vPVINag~~~~HPtQaLaDl~Ti~e~~g~l~~gl~va~vGD 154 (307)
T 3tpf_A 75 LSRGEPVKDTARVIGAMVDFVMMRVNKHETLLEFARYSKAPVINALSELYHPTQVLGDLFTIKEWNKMQNGIAKVAFIGD 154 (307)
T ss_dssp TTTSSCHHHHHHHHHHHSSEEEEECSCHHHHHHHHHHCSSCEEEEECSSCCHHHHHHHHHHHHHTTCCGGGCCEEEEESC
T ss_pred CCCCCCHHHHHHHHHHhCCEEEEecCChHHHHHHHHhCCCCEEeCCCCCcCcHHHHHHHHHHHHHhCCCCCCCEEEEEcC
Confidence 4789999999999999999999999999877 78999999 999999999
Q ss_pred CCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHH----hcCCeEEEEe
Q psy4411 49 LKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVA----SKGKQQEVYE 98 (99)
Q Consensus 49 ~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~----~~g~~~~~~~ 98 (99)
++ ||+|||+.++++||++|++++|++|+|++++++.++ ++|+++++++
T Consensus 155 ~~--~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~ 206 (307)
T 3tpf_A 155 SN--NMCNSWLITAAILGFEISIAMPKNYKISPEIWEFAMKQALISGAKISLGY 206 (307)
T ss_dssp SS--HHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEES
T ss_pred CC--ccHHHHHHHHHHcCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEEc
Confidence 75 599999999999999999999999999999877665 7888888765
No 9
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=99.96 E-value=5.1e-29 Score=190.18 Aligned_cols=97 Identities=19% Similarity=0.216 Sum_probs=88.9
Q ss_pred CCCCCCHHHHHHHHhhccCEEEEccCCchhH-------------------------------HHHhc-CCCCcEEEEECC
Q psy4411 1 MMMYSNLIDTVAVLSGYADVIVLRHPEPGAV-------------------------------KEEMG-RVNGLTITMVGD 48 (99)
Q Consensus 1 ~~~~Es~~Dta~vls~y~D~iv~R~~~~~~~-------------------------------~e~~g-~l~g~~i~~vGd 48 (99)
+++|||++|||||||+|+|+||+||+.|+.+ +|++| +++|+||+|+||
T Consensus 84 ~~kgEsl~DTarvLs~~~D~IviR~~~~~~~~~lA~~s~vPVINa~~~~~HPtQ~LaDl~Ti~e~~g~~l~gl~va~vGD 163 (335)
T 1dxh_A 84 IGHKESMKDTARVLGRMYDAIEYRGFKQEIVEELAKFAGVPVFNGLTDEYHPTQMLADVLTMREHSDKPLHDISYAYLGD 163 (335)
T ss_dssp BTTTBCHHHHHHHHHHHCSEEEEECSCHHHHHHHHHHSSSCEEEEECSSCCHHHHHHHHHHHHHTCSSCGGGCEEEEESC
T ss_pred CcCCCcHHHHHHHHHhhCCEEEEecCChhHHHHHHHhCCCCEEcCCCCCCCcHHHHHHHHHHHHHcCCCcCCeEEEEecC
Confidence 4689999999999999999999999999977 78999 999999999999
Q ss_pred CCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHH----hcCCeEEEEe
Q psy4411 49 LKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVA----SKGKQQEVYE 98 (99)
Q Consensus 49 ~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~----~~g~~~~~~~ 98 (99)
+.| ||+|||+.++++||++|++++|++|+|+++++++++ ++|+++++++
T Consensus 164 ~~~-~va~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~ 216 (335)
T 1dxh_A 164 ARN-NMGNSLLLIGAKLGMDVRIAAPKALWPHDEFVAQCKKFAEESGAKLTLTE 216 (335)
T ss_dssp CSS-HHHHHHHHHHHHTTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCEEEEES
T ss_pred Ccc-chHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEe
Confidence 833 899999999999999999999999999998877665 7898888765
No 10
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=99.96 E-value=6.9e-29 Score=189.33 Aligned_cols=97 Identities=23% Similarity=0.238 Sum_probs=88.8
Q ss_pred CCCCCCHHHHHHHHhhccCEEEEccCCchhH-------------------------------HHH-hc-CCCCcEEEEEC
Q psy4411 1 MMMYSNLIDTVAVLSGYADVIVLRHPEPGAV-------------------------------KEE-MG-RVNGLTITMVG 47 (99)
Q Consensus 1 ~~~~Es~~Dta~vls~y~D~iv~R~~~~~~~-------------------------------~e~-~g-~l~g~~i~~vG 47 (99)
+++|||++|||||||+|+|+||+||+.|+.+ +|+ +| +++|+||+|||
T Consensus 83 ~~kgEsl~DTarvLs~~~D~IviR~~~~~~~~~lA~~~~vPVINa~~~~~HPtQ~LaDl~Ti~e~~~g~~l~gl~ia~vG 162 (333)
T 1duv_G 83 IGHKESIKDTARVLGRMYDGIQYRGYGQEIVETLAEYASVPVWNGLTNEFHPTQLLADLLTMQEHLPGKAFNEMTLVYAG 162 (333)
T ss_dssp BTTTBCHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHSSCEEESCCSSCCHHHHHHHHHHHHHHSTTCCGGGCEEEEES
T ss_pred CcCCCcHHHHHHHHHHhCCEEEEEcCCchHHHHHHHhCCCCeEcCCCCCCCchHHHHHHHHHHHHhcCCCCCCcEEEEEC
Confidence 4689999999999999999999999999877 788 89 99999999999
Q ss_pred CCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHH----hcCCeEEEEe
Q psy4411 48 DLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVA----SKGKQQEVYE 98 (99)
Q Consensus 48 d~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~----~~g~~~~~~~ 98 (99)
|+.| ||+|||+.++++||++|++++|++|+|+++++++++ ++|+++++++
T Consensus 163 D~~~-~va~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~ 216 (333)
T 1duv_G 163 DARN-NMGNSMLEAAALTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTE 216 (333)
T ss_dssp CTTS-HHHHHHHHHHHHHCCEEEEECCGGGCCCHHHHHHHHHHHHHTTCEEEEES
T ss_pred CCcc-chHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEE
Confidence 9833 899999999999999999999999999998877665 7898988765
No 11
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=99.96 E-value=1.1e-28 Score=187.63 Aligned_cols=96 Identities=21% Similarity=0.319 Sum_probs=85.1
Q ss_pred CCCCCCHHHHHHHHhhccCEEEEccCCchhH-------------------------------HHHhcCCCCcEEEEECCC
Q psy4411 1 MMMYSNLIDTVAVLSGYADVIVLRHPEPGAV-------------------------------KEEMGRVNGLTITMVGDL 49 (99)
Q Consensus 1 ~~~~Es~~Dta~vls~y~D~iv~R~~~~~~~-------------------------------~e~~g~l~g~~i~~vGd~ 49 (99)
+++|||++|||||||+|+|+||+||+.++.+ +|++|+++|+||+||||+
T Consensus 87 ~~kgEsl~DTarvLs~~~D~iviR~~~~~~~~~lA~~~~vPVINag~~~~HPtQaLaDl~Ti~e~~g~l~glkva~vGD~ 166 (323)
T 3gd5_A 87 VGRGEPVRDTARVLGRYVDGLAIRTFAQTELEEYAHYAGIPVINALTDHEHPCQVVADLLTIRENFGRLAGLKLAYVGDG 166 (323)
T ss_dssp ----CCHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHCSCEEEEECSSCCHHHHHHHHHHHHHHHSCCTTCEEEEESCC
T ss_pred CCCCCCHHHHHHHHHHhCCEEEEecCChhHHHHHHHhCCCCEEeCCCCCCCcHHHHHHHHHHHHHhCCCCCCEEEEECCC
Confidence 4689999999999999999999999999877 789999999999999999
Q ss_pred CCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHH----hcCCeEEEEe
Q psy4411 50 KNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVA----SKGKQQEVYE 98 (99)
Q Consensus 50 ~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~----~~g~~~~~~~ 98 (99)
+ ||+|||+.++++||++|++++|++|+|+++++++++ ++|+++++++
T Consensus 167 ~--rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~ 217 (323)
T 3gd5_A 167 N--NVAHSLLLGCAKVGMSIAVATPEGFTPDPAVSARASEIAGRTGAEVQILR 217 (323)
T ss_dssp C--HHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEES
T ss_pred C--cHHHHHHHHHHHcCCEEEEECCCcccCCHHHHHHHHHHHHHcCCeEEEEC
Confidence 3 799999999999999999999999999999887665 5688888765
No 12
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=99.96 E-value=6.5e-29 Score=188.69 Aligned_cols=96 Identities=22% Similarity=0.361 Sum_probs=88.2
Q ss_pred CCCCCCHHHHHHHHhhccCEEEEccCCchhH-------------------------------HHHhcCCCCcEEEEECCC
Q psy4411 1 MMMYSNLIDTVAVLSGYADVIVLRHPEPGAV-------------------------------KEEMGRVNGLTITMVGDL 49 (99)
Q Consensus 1 ~~~~Es~~Dta~vls~y~D~iv~R~~~~~~~-------------------------------~e~~g~l~g~~i~~vGd~ 49 (99)
+++|||++|||+|||+|+|+||+||+.|+.+ +|++|+++|+||+||||+
T Consensus 85 ~~kgEsl~DTarvls~~~D~iviR~~~~~~~~~lA~~~~vPVINa~~~~~HPtQaLaDl~Ti~e~~g~l~gl~va~vGD~ 164 (321)
T 1oth_A 85 LGVNESLTDTARVLSSMADAVLARVYKQSDLDTLAKEASIPIINGLSDLYHPIQILADYLTLQEHYSSLKGLTLSWIGDG 164 (321)
T ss_dssp BTTTBCHHHHHHHHHHHCSEEEEECSCHHHHHHHHHHCSSCEEESCCSSCCHHHHHHHHHHHHHHHSCCTTCEEEEESCS
T ss_pred CCCCCCHHHHHHHHHHhCCEEEEeCCChhHHHHHHHhCCCCEEcCCCCCCCcHHHHHHHHHHHHHhCCcCCcEEEEECCc
Confidence 4689999999999999999999999999977 789999999999999998
Q ss_pred CCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHH----hcCCeEEEEe
Q psy4411 50 KNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVA----SKGKQQEVYE 98 (99)
Q Consensus 50 ~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~----~~g~~~~~~~ 98 (99)
+ ||+|||+.++++||++|++++|++|+|++++++.++ ++|+++++++
T Consensus 165 ~--~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~ 215 (321)
T 1oth_A 165 N--NILHSIMMSAAKFGMHLQAATPKGYEPDASVTKLAEQYAKENGTKLLLTN 215 (321)
T ss_dssp S--HHHHHHHTTTGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEES
T ss_pred h--hhHHHHHHHHHHcCCeEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEE
Confidence 6 599999999999999999999999999999887655 5788888764
No 13
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=99.96 E-value=7.3e-29 Score=189.62 Aligned_cols=96 Identities=26% Similarity=0.307 Sum_probs=85.6
Q ss_pred CCCCCCHHHHHHHHhhccCEEEEccCCchhH-------------------------------HHHhcCCCCcEEEEECCC
Q psy4411 1 MMMYSNLIDTVAVLSGYADVIVLRHPEPGAV-------------------------------KEEMGRVNGLTITMVGDL 49 (99)
Q Consensus 1 ~~~~Es~~Dta~vls~y~D~iv~R~~~~~~~-------------------------------~e~~g~l~g~~i~~vGd~ 49 (99)
+++|||++|||||||+|+|+||+||+.++.+ +|++|+++|+||+||||+
T Consensus 109 ~~kgEsl~DTarvLs~y~D~IviR~~~~~~~~~lA~~~~vPVINag~~~~HPtQaLaDl~TI~E~~G~l~glkva~vGD~ 188 (340)
T 4ep1_A 109 MGRGETVSDTAKVLSHYIDGIMIRTFSHADVEELAKESSIPVINGLTDDHHPCQALADLMTIYEETNTFKGIKLAYVGDG 188 (340)
T ss_dssp ----CCTTHHHHHHHHHCSEEEEECSCHHHHHHHHHHCSSCEEEEECSSCCHHHHHHHHHHHHHHHSCCTTCEEEEESCC
T ss_pred CCCCCCHHHHHHHHHHhCCEEEEecCChhHHHHHHHhCCCCEEeCCCCCCCcHHHHHHHHHHHHHhCCCCCCEEEEECCC
Confidence 4689999999999999999999999999877 789999999999999998
Q ss_pred CCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHH----hcCCeEEEEe
Q psy4411 50 KNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVA----SKGKQQEVYE 98 (99)
Q Consensus 50 ~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~----~~g~~~~~~~ 98 (99)
+ ||+|||+.++++||++|++++|++|+|++++++.++ +.|+++++++
T Consensus 189 ~--nva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~v~~~~ 239 (340)
T 4ep1_A 189 N--NVCHSLLLASAKVGMHMTVATPVGYRPNEEIVKKALAIAKETGAEIEILH 239 (340)
T ss_dssp C--HHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHCCCEEEES
T ss_pred c--hhHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEC
Confidence 4 699999999999999999999999999999887765 6798888765
No 14
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=99.96 E-value=1.2e-28 Score=189.52 Aligned_cols=97 Identities=27% Similarity=0.352 Sum_probs=89.0
Q ss_pred CCCCCCHHHHHHHHhhccCEEEEccCCchhH-------------------------------HHHhcCCCCcEEEEECCC
Q psy4411 1 MMMYSNLIDTVAVLSGYADVIVLRHPEPGAV-------------------------------KEEMGRVNGLTITMVGDL 49 (99)
Q Consensus 1 ~~~~Es~~Dta~vls~y~D~iv~R~~~~~~~-------------------------------~e~~g~l~g~~i~~vGd~ 49 (99)
+++|||++|||||||+|+|+||+||+.++.+ +|++|+++|+||+|+||+
T Consensus 106 ~~kgEsl~DTarvLs~~~D~IviR~~~~~~~~~lA~~s~vPVINa~~~~~HPtQaLaDl~Ti~E~~g~l~gl~va~vGD~ 185 (359)
T 2w37_A 106 LGKKESTSDTAKVLGSMFDGIEFRGFKQSDAEILARDSGVPVWNGLTDEWHPTQMLADFMTVKENFGKLQGLTLTFMGDG 185 (359)
T ss_dssp TTTSSCHHHHHHHHHHHCSEEEEESSCHHHHHHHHHHSSSCEEEEECSSCCHHHHHHHHHHHHHHHSCCTTCEEEEESCT
T ss_pred CCCCcCHHHHHHHHHHhcCEEEEecCChHHHHHHHHhCCCCEEcCCCCCCCccHHHHHHHHHHHHhCCcCCeEEEEECCC
Confidence 4789999999999999999999999999977 789999999999999998
Q ss_pred CCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHH----hcCCeEEEEe
Q psy4411 50 KNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVA----SKGKQQEVYE 98 (99)
Q Consensus 50 ~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~----~~g~~~~~~~ 98 (99)
.| ||+|||+.++++||++|++++|++|+|+++++++++ ++|+++++++
T Consensus 186 ~~-rva~Sl~~~~~~lG~~v~~~~P~~l~p~~~~~~~~~~~a~~~G~~v~~~~ 237 (359)
T 2w37_A 186 RN-NVANSLLVTGAILGVNIHIVAPKALFPTEETQNIAKGFAEKSGAKLVITD 237 (359)
T ss_dssp TS-HHHHHHHHHHHHHTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCCEEEES
T ss_pred cc-chHHHHHHHHHHcCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEe
Confidence 33 899999999999999999999999999998877665 7898888765
No 15
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=99.95 E-value=1.9e-28 Score=188.73 Aligned_cols=97 Identities=22% Similarity=0.236 Sum_probs=89.1
Q ss_pred CCCCCCHHHHHHHHhhccCEEEEccCCchhH-------------------------------HHHhcCCCCcEEEEECCC
Q psy4411 1 MMMYSNLIDTVAVLSGYADVIVLRHPEPGAV-------------------------------KEEMGRVNGLTITMVGDL 49 (99)
Q Consensus 1 ~~~~Es~~Dta~vls~y~D~iv~R~~~~~~~-------------------------------~e~~g~l~g~~i~~vGd~ 49 (99)
+++|||++|||||||+|+|+|++||+.++.+ +|++|+++|+||+||||+
T Consensus 110 ~~kgEsl~DTarvLs~~~D~IviR~~~~~~~~~lA~~s~vPVINa~~~~~HPtQaLaDl~Ti~E~~G~l~glkva~vGD~ 189 (365)
T 4amu_A 110 MGKKESIEDTAKVLGRFYDGIEFRGFAQSDVDALVKYSGVPVWNGLTDDEHPTQIIADFMTMKEKFGNLKNKKIVFIGDY 189 (365)
T ss_dssp CSSSSCHHHHHHHHHHHCSEEEEECSCHHHHHHHHHHHCSCEEEEECSSCCHHHHHHHHHHHHHHHSSCTTCEEEEESST
T ss_pred CCCCcCHHHHHHHHHhhCcEEEEecCChhHHHHHHHhCCCCEEeCCCCCCCcHHHHHHHHHHHHHhCCCCCCEEEEECCC
Confidence 5799999999999999999999999999877 789999999999999999
Q ss_pred CCchhHHHHHHHHhhCCCEEEEECCCCCCC--CHHHHHHH----HhcCCeEEEEe
Q psy4411 50 KNGRTVHSLARLLTLYDVKLNYVSPPNLGM--PESIQEFV----ASKGKQQEVYE 98 (99)
Q Consensus 50 ~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~--~~~~~~~a----~~~g~~~~~~~ 98 (99)
.| ||+|||+.++++||++|++++|++|+| ++++++++ +++|+++++++
T Consensus 190 ~n-nva~Sl~~~~~~lG~~v~~~~P~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~ 243 (365)
T 4amu_A 190 KN-NVGVSTMIGAAFNGMHVVMCGPDNYKNEIDKNVLAKCIELFKRNGGSLRFST 243 (365)
T ss_dssp TS-HHHHHHHHHHHHTTCEEEEESCGGGGGGSCHHHHHHHHHHHHHHSCEEEEES
T ss_pred Cc-chHHHHHHHHHHcCCEEEEECCccccCCCcHHHHHHHHHHHHHcCCEEEEEC
Confidence 76 799999999999999999999999999 99988765 56788888765
No 16
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=99.95 E-value=1.7e-28 Score=186.83 Aligned_cols=97 Identities=18% Similarity=0.239 Sum_probs=85.1
Q ss_pred CCCCCCHHHHHHHHhhccCEEEEccCCchhH-------------------------------HHHhc-------CCCCcE
Q psy4411 1 MMMYSNLIDTVAVLSGYADVIVLRHPEPGAV-------------------------------KEEMG-------RVNGLT 42 (99)
Q Consensus 1 ~~~~Es~~Dta~vls~y~D~iv~R~~~~~~~-------------------------------~e~~g-------~l~g~~ 42 (99)
+++|||++|||||||+|+|+||+||+.|+.+ +|++| +++|+|
T Consensus 84 ~~kgEsl~DTarvls~~~D~iviR~~~~~~~~~lA~~~~vPVINag~~~~HPtQaLaDl~Ti~e~~g~~~~~~~~l~gl~ 163 (328)
T 3grf_A 84 VGGKETVQDTAEVFSRMVDICTARLATKEMMREMAQHASVPCINALDDFGHPLQMVCDFMTIKEKFTAAGEFSNGFKGIK 163 (328)
T ss_dssp -----CHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHCSSCEEESSCSSCCHHHHHHHHHHHHHHHHHTTCCTTTGGGCC
T ss_pred CCCCCCHHHHHHHHHhhCCEEEEecCChhHHHHHHHhCCCCEEeCCCCCCCcHHHHHHHHHHHHHhCCccccccccCCcE
Confidence 4689999999999999999999999999877 78899 899999
Q ss_pred EEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCC--CCHHHHHHHHh------cCCeEEEEe
Q psy4411 43 ITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLG--MPESIQEFVAS------KGKQQEVYE 98 (99)
Q Consensus 43 i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~--~~~~~~~~a~~------~g~~~~~~~ 98 (99)
|+||||+.| ||+|||+.++++||++|++++|++|+ |++++++++++ +|+++++++
T Consensus 164 va~vGD~~~-~va~Sl~~~~~~~G~~v~~~~P~~~~~~p~~~~~~~~~~~~~~~~~g~~v~~~~ 226 (328)
T 3grf_A 164 FAYCGDSMN-NVTYDLMRGCALLGMECHVCCPDHKDFKPIKEVIDECEEIIAKHGTGGSIKIFH 226 (328)
T ss_dssp EEEESCCSS-HHHHHHHHHHHHHTCEEEEECCSSGGGSCCHHHHHHHHHHHHHHTCCCEEEEES
T ss_pred EEEeCCCCc-chHHHHHHHHHHcCCEEEEECChHhhhCCCHHHHHHHHHHHhhccCCCeEEEEc
Confidence 999999966 89999999999999999999999999 99999877664 688888765
No 17
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=99.95 E-value=3.8e-28 Score=185.64 Aligned_cols=96 Identities=22% Similarity=0.298 Sum_probs=87.9
Q ss_pred CCCCCCHHHHHHHHhhccCEEEEccCCchhH-------------------------------HHHh--c-CCCCcEEEEE
Q psy4411 1 MMMYSNLIDTVAVLSGYADVIVLRHPEPGAV-------------------------------KEEM--G-RVNGLTITMV 46 (99)
Q Consensus 1 ~~~~Es~~Dta~vls~y~D~iv~R~~~~~~~-------------------------------~e~~--g-~l~g~~i~~v 46 (99)
+++|||++|||||||+|+|+||+||+.++.+ +|++ | +++|+||+||
T Consensus 102 l~kgEsl~DTarvLs~~~D~IviR~~~~~~~~~lA~~~~vPVINag~~~~HPtQaLaDl~Ti~e~~~~G~~l~glkva~v 181 (339)
T 4a8t_A 102 LGGHETIEDTSRVLSRLVDILMARVERHHSIVDLANCATIPVINGMSDYNHPTQELGDLCTMVEHLPEGKKLEDCKVVFV 181 (339)
T ss_dssp SSSSSCHHHHHHHHHHHCSEEEEECSSHHHHHHHHHHCSSCEEECCCSSCCHHHHHHHHHHHHHTCCTTCCGGGCEEEEE
T ss_pred CCCCcCHHHHHHHHHHhCCEEEEecCcHHHHHHHHHhCCCCEEECCCCCcCcHHHHHHHHHHHHHhhcCCCCCCCEEEEE
Confidence 4789999999999999999999999999877 7889 8 8999999999
Q ss_pred CCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHH----hcCCeEEEEe
Q psy4411 47 GDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVA----SKGKQQEVYE 98 (99)
Q Consensus 47 Gd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~----~~g~~~~~~~ 98 (99)
||++ ||+|||+.++++||++|++++|++|+|+++++++++ +.|+++++++
T Consensus 182 GD~~--rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~ 235 (339)
T 4a8t_A 182 GDAT--QVCFSLGLITTKMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFLVTD 235 (339)
T ss_dssp SSCC--HHHHHHHHHHHHTTCEEEEECCTTSSCCHHHHHHHHHHHHHHCCEEEEEC
T ss_pred CCCc--hhHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCEEEEEC
Confidence 9993 799999999999999999999999999999987754 5688888765
No 18
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=99.95 E-value=5.2e-28 Score=185.78 Aligned_cols=96 Identities=22% Similarity=0.298 Sum_probs=87.8
Q ss_pred CCCCCCHHHHHHHHhhccCEEEEccCCchhH-------------------------------HHHh--c-CCCCcEEEEE
Q psy4411 1 MMMYSNLIDTVAVLSGYADVIVLRHPEPGAV-------------------------------KEEM--G-RVNGLTITMV 46 (99)
Q Consensus 1 ~~~~Es~~Dta~vls~y~D~iv~R~~~~~~~-------------------------------~e~~--g-~l~g~~i~~v 46 (99)
+++|||++|||||||+|+|+||+||+.++.+ +|++ | +++|+||+||
T Consensus 80 l~kgEsl~DTarvLs~y~D~IviR~~~~~~~~~lA~~~~vPVINag~~~~HPtQaLaDl~TI~E~~~~G~~l~glkva~v 159 (355)
T 4a8p_A 80 LGGHETIEDTSRVLSRLVDILMARVERHHSIVDLANCATIPVINGMSDYNHPTQELGDLCTMVEHLPEGKKLEDCKVVFV 159 (355)
T ss_dssp BTTTBCHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHCSSCEEECCCSSCCHHHHHHHHHHHHHTCCTTCCGGGCEEEEE
T ss_pred CCCCcCHHHHHHHHHHhCCEEEEecCcHHHHHHHHHhCCCCEEeCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCCEEEEE
Confidence 4689999999999999999999999999877 7889 8 8999999999
Q ss_pred CCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHH----hcCCeEEEEe
Q psy4411 47 GDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVA----SKGKQQEVYE 98 (99)
Q Consensus 47 Gd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~----~~g~~~~~~~ 98 (99)
||++ ||+|||+.++++||++|++++|++|+|+++++++++ +.|+++++++
T Consensus 160 GD~~--rva~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~ 213 (355)
T 4a8p_A 160 GDAT--QVCFSLGLITTKMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFLVTD 213 (355)
T ss_dssp SCCC--HHHHHHHHHHHHTTCEEEEECCTTSSCCHHHHHHHHHHHHHHSCEEEEEC
T ss_pred CCCc--hhHHHHHHHHHHcCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEEC
Confidence 9993 799999999999999999999999999999987654 5688888765
No 19
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=99.95 E-value=9.5e-28 Score=184.23 Aligned_cols=96 Identities=25% Similarity=0.339 Sum_probs=85.4
Q ss_pred CCCCCCHHHHHHHHhhccCEEEEccCCchhH-------------------------------HHHhcCC-----------
Q psy4411 1 MMMYSNLIDTVAVLSGYADVIVLRHPEPGAV-------------------------------KEEMGRV----------- 38 (99)
Q Consensus 1 ~~~~Es~~Dta~vls~y~D~iv~R~~~~~~~-------------------------------~e~~g~l----------- 38 (99)
+++|||++|||||||+|+|+||+||+.|+.+ +|+||.+
T Consensus 105 l~kgEsl~DTarvLs~~~D~IviR~~~~~~~~~lA~~s~vPVINag~d~~HPtQaLaDl~TI~E~~G~~~~~~~~~~~~~ 184 (353)
T 3sds_A 105 LGVNESLYDTSVVISSMVSCIVARVGPHSDIANLAKHSSVPVINALCDTFHPLQAIADFLTIHESFASQSATHGTHPSSL 184 (353)
T ss_dssp -CCSSCHHHHHHHHHTSCSEEEEECSSHHHHHHHHHHCSSCEEEEECSSCCHHHHHHHHHHHHHHTC--------CTTCC
T ss_pred ccCCccHHHHHHHHHHhcCEEEEEeCChHHHHHHHhhCCCCEEECCCCCCCcHHHHHHHHHHHHHhCCCccccccccccc
Confidence 4689999999999999999999999999877 7899986
Q ss_pred --CCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHh------cCCeEEEEe
Q psy4411 39 --NGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVAS------KGKQQEVYE 98 (99)
Q Consensus 39 --~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~------~g~~~~~~~ 98 (99)
+|+||+||||++| |+|||+.++++||++|++++|++|++|+++++++++ +|+.+++++
T Consensus 185 ~l~glkva~vGD~~n--va~Sl~~~l~~lG~~v~~~~P~~~~~~~~i~~~~~~~a~~~~~g~~~~~~~ 250 (353)
T 3sds_A 185 GLEGLKIAWVGDANN--VLFDLAIAATKMGVNVAVATPRGYEIPSHIVELIQKAREGVQSPGNLTQTT 250 (353)
T ss_dssp SCTTCEEEEESCCCH--HHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHHTTCSSCCCEEEES
T ss_pred ccCCCEEEEECCCch--HHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHhhhhccCCCeEEEEC
Confidence 9999999999975 999999999999999999999999999999887764 477887764
No 20
>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=99.95 E-value=1e-28 Score=186.85 Aligned_cols=94 Identities=22% Similarity=0.368 Sum_probs=84.5
Q ss_pred CCCCCCHHHHHHHHhhccCEEEEccCCchhH-------------------------------HHHhcCCCCcEEEEECCC
Q psy4411 1 MMMYSNLIDTVAVLSGYADVIVLRHPEPGAV-------------------------------KEEMGRVNGLTITMVGDL 49 (99)
Q Consensus 1 ~~~~Es~~Dta~vls~y~D~iv~R~~~~~~~-------------------------------~e~~g~l~g~~i~~vGd~ 49 (99)
+++|||++|||||||+|+|+||+||+.|+.+ +|++|+++|+||+||||+
T Consensus 84 ~~kgEsl~DTarvls~~~D~iviR~~~~~~~~~lA~~~~vPVINag~~~~HPtQaLaDl~Ti~e~~g~l~glkva~vGD~ 163 (309)
T 4f2g_A 84 LGRGEPVEDSAQVISRMVDIIMIRTFEQDIIQRFAENSRVPVINGLTNEYHPCQVLADIFTYYEHRGPIRGKTVAWVGDA 163 (309)
T ss_dssp ETBEECHHHHHHHHHHHCSEEEEECSCHHHHHHHHHTCSSCEEEEECSSCCHHHHHHHHHHHHHHHSCCTTCEEEEESCC
T ss_pred CCCCCCHHHHHHHHHHhCCEEEEecCCHHHHHHHHHhCCCCEEECCCCccCcHHHHHHHHHHHHHhCCCCCCEEEEECCC
Confidence 3689999999999999999999999999877 789999999999999998
Q ss_pred CCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCeEEEEe
Q psy4411 50 KNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQQEVYE 98 (99)
Q Consensus 50 ~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~~~~~ 98 (99)
+ ||+|||+.++++||++|++++|++|+|+++++ ++++|+++++++
T Consensus 164 ~--~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~--~~~~g~~v~~~~ 208 (309)
T 4f2g_A 164 N--NMLYTWIQAARILDFKLQLSTPPGYALDAKLV--DAESAPFYQVFD 208 (309)
T ss_dssp C--HHHHHHHHHHHHHTCEEEEECCGGGCCCGGGS--CGGGGGGEEECS
T ss_pred c--chHHHHHHHHHHcCCEEEEECCcccCCCHHHH--HHHcCCeEEEEc
Confidence 5 59999999999999999999999999999875 345677776653
No 21
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=99.95 E-value=2e-27 Score=179.22 Aligned_cols=85 Identities=21% Similarity=0.267 Sum_probs=79.8
Q ss_pred CCCCCCHHHHHHHHhhccCEEEEccCCchhH-------------------------------HHHhcCCCCcEEEEECCC
Q psy4411 1 MMMYSNLIDTVAVLSGYADVIVLRHPEPGAV-------------------------------KEEMGRVNGLTITMVGDL 49 (99)
Q Consensus 1 ~~~~Es~~Dta~vls~y~D~iv~R~~~~~~~-------------------------------~e~~g~l~g~~i~~vGd~ 49 (99)
++||||++||||+||+|+|+||+||+.++.+ +|++|+++|+||+|+||+
T Consensus 84 ~~kgEsl~DTarvls~~~D~iviR~~~~~~~~~la~~~~vPVINa~~~~~HPtQaLaDl~Ti~e~~g~l~gl~ia~vGD~ 163 (301)
T 2ef0_A 84 IGEREPVRDVAKNLERFVEGIAARVFRHETVEALARHAKVPVVNALSDRAHPLQALADLLTLKEVFGGLAGLEVAWVGDG 163 (301)
T ss_dssp TTTCCCHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHCSSCEEEEECSSCCHHHHHHHHHHHHHHHSCCTTCEEEEESCC
T ss_pred cCCCCchHHHHHHHHHhCCEEEEecCChHHHHHHHHHCCCCEEeCCCCccCchHHHHHHHHHHHHhCCcCCcEEEEECCC
Confidence 4789999999999999999999999999977 789999999999999998
Q ss_pred CCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHH
Q psy4411 50 KNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFV 87 (99)
Q Consensus 50 ~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a 87 (99)
+ ||+|||+.++++||++|++++|++|+|++++++++
T Consensus 164 ~--rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~ 199 (301)
T 2ef0_A 164 N--NVLNSLLEVAPLAGLKVRVATPKGYEPDPGLLKRA 199 (301)
T ss_dssp C--HHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHH
T ss_pred c--hhHHHHHHHHHHcCCEEEEECCchhcCCHHHHhhc
Confidence 3 79999999999999999999999999999887765
No 22
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=99.95 E-value=3.1e-27 Score=181.68 Aligned_cols=97 Identities=20% Similarity=0.269 Sum_probs=89.0
Q ss_pred CCCCCHHHHHHHHhhccCEEEEccC----------CchhH------------------------------HHHhcC--CC
Q psy4411 2 MMYSNLIDTVAVLSGYADVIVLRHP----------EPGAV------------------------------KEEMGR--VN 39 (99)
Q Consensus 2 ~~~Es~~Dta~vls~y~D~iv~R~~----------~~~~~------------------------------~e~~g~--l~ 39 (99)
++|||++|||||||+|+|+||+||+ .++.+ +|++|. ++
T Consensus 110 ~kgEsl~DTarvLs~y~D~IviR~~~~~~~~~~~~~~~~~~~lA~~~~vPVINag~g~HPtQaLaDl~TI~E~~g~~~l~ 189 (359)
T 1zq6_A 110 DTEEHIAEVARVLGRYVDLIGVRAFPKFVDWSKDREDQVLKSFAKYSPVPVINMETITHPCQELAHALALQEHFGTPDLR 189 (359)
T ss_dssp SCCEEHHHHHHHHHHHCSEEEEECCCCSSCHHHHTTCHHHHHHHHHCSSCEEESSSSCCHHHHHHHHHHHHHHHTSSCCT
T ss_pred CCCCcHHHHHHHHHHhCcEEEEeccccccccccccchHHHHHHHHhCCCCEEeCCCCCCcHHHHHHHHHHHHHhCCCccc
Confidence 7899999999999999999999999 88866 789998 99
Q ss_pred CcE--EEEECCCCCc--hhHHHHHHHHhhCCCEEEEECCC-CCCCCHHHHHHHH----hcCCeEEEEe
Q psy4411 40 GLT--ITMVGDLKNG--RTVHSLARLLTLYDVKLNYVSPP-NLGMPESIQEFVA----SKGKQQEVYE 98 (99)
Q Consensus 40 g~~--i~~vGd~~n~--rv~~Sl~~~~~~~G~~v~~~~P~-~~~~~~~~~~~a~----~~g~~~~~~~ 98 (99)
|+| |+|+||..+| ||+|||+.++++||++|++++|+ +|+|+++++++++ ++|+++++++
T Consensus 190 glkvvva~vGDl~~~~nrva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~~a~~~g~~v~~~~ 257 (359)
T 1zq6_A 190 GKKYVLTWTYHPKPLNTAVANSALTIATRMGMDVTLLCPTPDYILDERYMDWAAQNVAESGGSLQVSH 257 (359)
T ss_dssp TCEEEEEECCCSSCCCSHHHHHHHHHHHHTTCEEEEECSSGGGCCCHHHHHHHHHHHHHHSCEEEEEC
T ss_pred CCeeEEEEEecccccccchHHHHHHHHHHcCCEEEEEcCccccCCCHHHHHHHHHHHHHcCCeEEEEC
Confidence 999 9999997766 89999999999999999999999 9999999887665 7788888764
No 23
>4h31_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PE5; 1.70A {Vibrio vulnificus} PDB: 3upd_A*
Probab=99.94 E-value=3e-27 Score=181.66 Aligned_cols=97 Identities=20% Similarity=0.175 Sum_probs=88.0
Q ss_pred CCCCCCHHHHHHHHhhccCEEEEccCCchhH-------------------------------HHHhc--CCCCcEEEEEC
Q psy4411 1 MMMYSNLIDTVAVLSGYADVIVLRHPEPGAV-------------------------------KEEMG--RVNGLTITMVG 47 (99)
Q Consensus 1 ~~~~Es~~Dta~vls~y~D~iv~R~~~~~~~-------------------------------~e~~g--~l~g~~i~~vG 47 (99)
+++|||++||||+||+|+|+||+||+.++.+ +|+++ .++|++|+|||
T Consensus 109 ~~kgEsl~DTarvLs~~~D~IviR~~~~~~~~~la~~s~vPVING~g~~~HPtQaL~Dl~Ti~e~~~~~~l~gl~ia~vG 188 (358)
T 4h31_A 109 IGDKESMKDTARVLGRMYDGIQYRGFGQAIVEELGAFAGVPVWNGLTDEFHPTQILADFLTMLEHSQGKALADIQFAYLG 188 (358)
T ss_dssp BTTTBCHHHHHHHHHHHCSEEEEECSCHHHHHHHHHHSSSCEEESCCSSCCHHHHHHHHHHHHHTTTTCCGGGCEEEEES
T ss_pred ccCccchhHHHHHhhccCceeEecccchhHHHHhhhhccCceECCCCcCCCchHHHHHHHHHHHHhcCCCcCceEEEecC
Confidence 4789999999999999999999999999877 67776 79999999999
Q ss_pred CCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHH----hcCCeEEEEe
Q psy4411 48 DLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVA----SKGKQQEVYE 98 (99)
Q Consensus 48 d~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~----~~g~~~~~~~ 98 (99)
|+.| ||+|||+.++++||++|++++|++|+|++++++.++ ++|+++++++
T Consensus 189 D~~~-~va~S~~~~~~~~g~~v~~~~P~~~~p~~~~~~~~~~~~~~~g~~v~~~~ 242 (358)
T 4h31_A 189 DARN-NVGNSLMVGAAKMGMDIRLVGPQAYWPDEELVAACQAIAKQTGGKITLTE 242 (358)
T ss_dssp CTTS-HHHHHHHHHHHHHTCEEEEESCGGGSCCHHHHHHHHHHHHHHTCEEEEES
T ss_pred CCCc-ccchHHHHHHHhcCceEEEeCCcccCCCHHHHHHHHHHHHHcCCcceecc
Confidence 9865 899999999999999999999999999999987654 6799998765
No 24
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=99.94 E-value=7e-27 Score=176.45 Aligned_cols=80 Identities=30% Similarity=0.436 Sum_probs=76.0
Q ss_pred CCCCCCHHHHHHHHhhc-cCEEEEccCCchhH--------------------------------HHHhcCCCCcEEEEEC
Q psy4411 1 MMMYSNLIDTVAVLSGY-ADVIVLRHPEPGAV--------------------------------KEEMGRVNGLTITMVG 47 (99)
Q Consensus 1 ~~~~Es~~Dta~vls~y-~D~iv~R~~~~~~~--------------------------------~e~~g~l~g~~i~~vG 47 (99)
+++|||++|||||||+| +|+||+||+.|+.+ +|++|+++|+||+|||
T Consensus 75 ~~kgEsl~DTarvLs~~~~D~iviR~~~~~~~~~la~~~~vPVINagdg~~~HPtQaLaDl~Ti~e~~g~l~glkva~vG 154 (304)
T 3r7f_A 75 VQKGETLYDTIRTLESIGVDVCVIRHSEDEYYEELVSQVNIPILNAGDGCGQHPTQSLLDLMTIYEEFNTFKGLTVSIHG 154 (304)
T ss_dssp SCSSSCHHHHHHHHHHHTCCEEEEECSSTTCHHHHHHHCSSCEEESCCTTSCCHHHHHHHHHHHHHHHSCCTTCEEEEES
T ss_pred CCCCCCHHHHHHHHHHhcCCEEEEecCChhHHHHHHHhCCCCEEeCCCCCCcCcHHHHHHHHHHHHHhCCCCCCEEEEEc
Confidence 47899999999999999 99999999998866 7899999999999999
Q ss_pred CCCCchhHHHHHHHHhhCCCEEEEECCCCCCCC
Q psy4411 48 DLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMP 80 (99)
Q Consensus 48 d~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~ 80 (99)
|++|+||+|||+.++++||++|++++|++|+|+
T Consensus 155 D~~~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~ 187 (304)
T 3r7f_A 155 DIKHSRVARSNAEVLTRLGARVLFSGPSEWQDE 187 (304)
T ss_dssp CCTTCHHHHHHHHHHHHTTCEEEEESCGGGSCT
T ss_pred CCCCcchHHHHHHHHHHcCCEEEEECCCccCcc
Confidence 999889999999999999999999999999884
No 25
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=99.93 E-value=1e-25 Score=169.27 Aligned_cols=81 Identities=30% Similarity=0.427 Sum_probs=74.5
Q ss_pred CCCCCCHHHHHHHHhhc-cCEEEEccCCchhH---------------------------------HHHhcCCCCcEEEEE
Q psy4411 1 MMMYSNLIDTVAVLSGY-ADVIVLRHPEPGAV---------------------------------KEEMGRVNGLTITMV 46 (99)
Q Consensus 1 ~~~~Es~~Dta~vls~y-~D~iv~R~~~~~~~---------------------------------~e~~g~l~g~~i~~v 46 (99)
++||||++||||+||+| +|+||+||+.++.+ +|++|+++|+||+|+
T Consensus 73 ~~kgEsl~DTarvls~~~~D~iviR~~~~~~~~~~la~~~~vPVINAG~g~~~HPtQaLaDl~Ti~e~~g~l~gl~va~v 152 (291)
T 3d6n_B 73 TVKGESFFDTLKTFEGLGFDYVVFRVPFVFFPYKEIVKSLNLRLVNAGDGTHQHPSQGLIDFFTIKEHFGEVKDLRVLYV 152 (291)
T ss_dssp CCTTCCHHHHHHHHHHTTCSEEEEEESSCCCSCHHHHHTCSSEEEEEEETTTBCHHHHHHHHHHHHHHHSCCTTCEEEEE
T ss_pred ccCCCcHHHHHHHHHHhcCCEEEEEcCChHHHHHHHHHhCCCCEEeCccCCCcCcHHHHHHHHHHHHHhCCcCCcEEEEE
Confidence 47899999999999999 59999999987743 789999999999999
Q ss_pred CCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCH
Q psy4411 47 GDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPE 81 (99)
Q Consensus 47 Gd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~ 81 (99)
||..++||+|||+.++++||++|++++|++|.|++
T Consensus 153 GDl~~~rva~Sl~~~~~~~g~~v~~~~P~~~~p~~ 187 (291)
T 3d6n_B 153 GDIKHSRVFRSGAPLLNMFGAKIGVCGPKTLIPRD 187 (291)
T ss_dssp SCCTTCHHHHHHHHHHHHTTCEEEEESCGGGSCTT
T ss_pred CCCCCCchHHHHHHHHHHCCCEEEEECCchhCCch
Confidence 99766789999999999999999999999998776
No 26
>3q98_A Transcarbamylase; rossmann fold, transferase; 2.00A {Escherichia coli}
Probab=99.91 E-value=2e-24 Score=168.01 Aligned_cols=98 Identities=16% Similarity=0.242 Sum_probs=81.1
Q ss_pred CCCCCCHHHHHHHHhhccCEEEEccCC-----ch---------------------h-H--------------------HH
Q psy4411 1 MMMYSNLIDTVAVLSGYADVIVLRHPE-----PG---------------------A-V--------------------KE 33 (99)
Q Consensus 1 ~~~~Es~~Dta~vls~y~D~iv~R~~~-----~~---------------------~-~--------------------~e 33 (99)
+++|||++|||||||+|+|+||+||+. |. . + +|
T Consensus 102 l~kGEsl~DTarvLs~y~D~IviRh~~~~g~~~~~~~~la~~~~~~~~~~v~~~~~PVINal~d~~HPtQaLaDl~TI~E 181 (399)
T 3q98_A 102 IAHGETVRETANMISFCADAIGIRDDMYLGAGNAYMREVGAALDDGYKQGVLPQRPALVNLQCDIDHPTQSMADLAWLRE 181 (399)
T ss_dssp --CCTTHHHHHHHTCTTEEEEEEEECCCCCC---HHHHHHHHHHHHHHTTSCSSCCEEEEEECSSCCHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHhhCcEEEEeccccCCcchHHHHHHHHHhhhhcccccccCCCcEEeCCCCCcCcHHHHHHHHHHHH
Confidence 478999999999999999999999862 21 1 2 78
Q ss_pred HhcC---CCCcEEEEECCCCC-----chhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHH----HhcCCeEEEEe
Q psy4411 34 EMGR---VNGLTITMVGDLKN-----GRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFV----ASKGKQQEVYE 98 (99)
Q Consensus 34 ~~g~---l~g~~i~~vGd~~n-----~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a----~~~g~~~~~~~ 98 (99)
++|+ ++|+||+|+||..+ .||+|||+.++++||++|++++|++|+|++++++.+ +++|+++++++
T Consensus 182 ~~G~~~~l~Glkva~vgd~~~~~G~~nnVa~Sli~~~~~lG~~v~~~~P~~~~~~~~~~~~a~~~a~~~G~~i~~~~ 258 (399)
T 3q98_A 182 HFGSLENLKGKKIAMTWAYSPSYGKPLSVPQGIIGLMTRFGMDVTLAHPEGYDLIPDVVEVAKNNAKASGGSFRQVT 258 (399)
T ss_dssp HHSSSGGGTTCEEEEECCCCSSCCCCTHHHHHHHHHHGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEES
T ss_pred HhCCccccCCCEEEEEEecccccCcchHHHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCEEEEEc
Confidence 8997 68899999976322 279999999999999999999999999999988765 46799988765
No 27
>2yfk_A Aspartate/ornithine carbamoyltransferase; transcarbamylase; 2.55A {Enterococcus faecalis}
Probab=99.90 E-value=4.2e-24 Score=166.97 Aligned_cols=98 Identities=15% Similarity=0.197 Sum_probs=79.1
Q ss_pred CCCCCCHHHHHHHHhhccCEEEEccCC-----ch---------------------h-H--------------------HH
Q psy4411 1 MMMYSNLIDTVAVLSGYADVIVLRHPE-----PG---------------------A-V--------------------KE 33 (99)
Q Consensus 1 ~~~~Es~~Dta~vls~y~D~iv~R~~~-----~~---------------------~-~--------------------~e 33 (99)
+++|||++|||+|||+|+|+||+||+. |+ . + +|
T Consensus 99 ~~kGEsl~DTarvLs~y~D~IviRh~~~~g~~~~~~~~lA~~~~~~~~~~~~~~~~PVINa~~~~~HPtQaLaDl~TI~E 178 (418)
T 2yfk_A 99 ISHGETVRETANMISFMADIIGIRDDMYIGKGNAYMHEVSESVQEGYKDGVLEQRPTLVNLQCDIDHPTQAMADALHLIH 178 (418)
T ss_dssp ----CHHHHHHHHTTTTEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHTTSCSSCCEEEEEEESSCCHHHHHHHHHHHHH
T ss_pred CCCCcCHHHHHHHHHHhCcEEEEecccccCcchHHHHHHHHHHHhhhcccccCCCCeEEeCCCCccChHHHHHHHHHHHH
Confidence 468999999999999999999999973 21 1 2 78
Q ss_pred HhcC---CCCcEEEEECCCCC-----chhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHH----hcCCeEEEEe
Q psy4411 34 EMGR---VNGLTITMVGDLKN-----GRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVA----SKGKQQEVYE 98 (99)
Q Consensus 34 ~~g~---l~g~~i~~vGd~~n-----~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~----~~g~~~~~~~ 98 (99)
++|+ ++|+||+||||... .||+|||+.++++||++|++++|++|+|+|++++.|+ +.|+++++++
T Consensus 179 ~~G~l~~l~Glkva~vgd~~~s~Gd~nnVa~Sli~~l~~lG~~v~l~~P~~~~~~p~~~~~a~~~a~~~G~~v~~~~ 255 (418)
T 2yfk_A 179 EFGGIENLKGKKVAMTWAYSPSYGKPLSVPQGIVGLMTRLGMDVVLAHPEGYEIMPEVEEVAKKNAAEFGGNFTKTN 255 (418)
T ss_dssp HTTSSGGGTTCEEEEECCCCSSSCCCSHHHHHHHHHHGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHSSEEEEES
T ss_pred HhCCccccCCCEEEEEeccccccCccchHHHHHHHHHHHcCCEEEEECCccccCCHHHHHHHHHHHHHcCCEEEEEc
Confidence 8998 78999999964211 1599999999999999999999999999999887644 5788888764
No 28
>1js1_X Transcarbamylase; alpha/beta topology, two domains, transferase; 2.00A {Bacteroides fragilis} SCOP: c.78.1.1 c.78.1.1 PDB: 2fg6_X* 2fg7_X* 2g7m_X*
Probab=99.89 E-value=1.8e-23 Score=159.03 Aligned_cols=78 Identities=17% Similarity=0.234 Sum_probs=73.1
Q ss_pred CCCCHHHHHHHHhhccCEEEEccC----------CchhH-------------------------------HHHhc--CCC
Q psy4411 3 MYSNLIDTVAVLSGYADVIVLRHP----------EPGAV-------------------------------KEEMG--RVN 39 (99)
Q Consensus 3 ~~Es~~Dta~vls~y~D~iv~R~~----------~~~~~-------------------------------~e~~g--~l~ 39 (99)
+|||++|||+|||+|+|+|++||+ .++.+ +|++| +++
T Consensus 89 kgEsl~DTarvLs~y~D~IviR~~~~~~~~~~~~~~~~~~~lA~~~~vPVINa~~~~~HPtQaLaDl~Ti~e~~g~~~l~ 168 (324)
T 1js1_X 89 KPEHLLEAIPVMGCYCDIIGVRSFARFENREYDYNEVIINQFIQHSGRPVFSMEAATRHPLQSFADLITIEEYKKTARPK 168 (324)
T ss_dssp CCEEHHHHHHHHHHTCSEEEEECCCCSSCHHHHHHTHHHHHHHHHSSSCEEESSCSSCCHHHHHHHHHHHHHHCSSSSCE
T ss_pred CCCCHHHHHHHHHHhCcEEEEecccccccccccccchHHHHHHhhCCCCEEECCCCCCCcHHHHHHHHHHHHHcCCCCee
Confidence 899999999999999999999999 87766 78899 899
Q ss_pred CcEEEE-----ECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHH
Q psy4411 40 GLTITM-----VGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQ 84 (99)
Q Consensus 40 g~~i~~-----vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~ 84 (99)
++|+| +|| + ||+|||+.++++||++|++++|++|+|+++++
T Consensus 169 -l~ia~a~~~~vGD-~--rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~ 214 (324)
T 1js1_X 169 -VVMTWAPHPRPLP-Q--AVPNSFAEWMNATDYEFVITHPEGYELDPKFV 214 (324)
T ss_dssp -EEEECCCCSSCCC-S--HHHHHHHHHHHTSSSEEEEECCTTCCCCHHHH
T ss_pred -EEEEEEcccccCC-c--chHHHHHHHHHHCCCEEEEeCCcccCCChhhc
Confidence 99999 999 3 79999999999999999999999999998774
No 29
>3kzn_A Aotcase, N-acetylornithine carbamoyltransferase; transcarbamylase, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: KCX AOR; 1.80A {Xanthomonas campestris PV} PDB: 3kzc_A* 3kzm_A* 3kzk_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 3l05_A* 3l02_A* 3m4n_A* 3l06_A* 3l04_A*
Probab=99.85 E-value=4.7e-21 Score=147.02 Aligned_cols=97 Identities=19% Similarity=0.268 Sum_probs=82.1
Q ss_pred CCCCCHHHHHHHHhhccCEEEEccCC----------chhH------------------------------HHHhcC--CC
Q psy4411 2 MMYSNLIDTVAVLSGYADVIVLRHPE----------PGAV------------------------------KEEMGR--VN 39 (99)
Q Consensus 2 ~~~Es~~Dta~vls~y~D~iv~R~~~----------~~~~------------------------------~e~~g~--l~ 39 (99)
.++||++||+++||+|+|+|++|++. ++.+ +|+||. ++
T Consensus 110 ~k~Es~~DTarvls~y~D~iviR~~~~~~~~~~~~~~~~~~~~a~~~~vPVIN~g~~~HPtQaL~Dl~Ti~e~~G~~dl~ 189 (359)
T 3kzn_A 110 DTEEHIAEVARVLGRYVDLIGVRAFPKFVDWSKDREDQVLKSFAKYSPVPVINMETITHPCQELAHALALQEHFGTPDLR 189 (359)
T ss_dssp SCCEEHHHHHHHHHHHCSEEEEECCCCSSCHHHHTTCHHHHHHHHHCSSCEEESSSSCCHHHHHHHHHHHHHHHTSSCCT
T ss_pred cccchHHHHHHHHhccCcEEEEEccccccchhcchhhHHHHHHHHhCCCcccCcccccCchHHHHHHHHHHHHcCCcccc
Confidence 47899999999999999999999764 3333 789996 88
Q ss_pred CcEEEEEC----CCCCchhHHHHHHHHhhCCCEEEEECCC-CCCCCHHHHHH----HHhcCCeEEEEe
Q psy4411 40 GLTITMVG----DLKNGRTVHSLARLLTLYDVKLNYVSPP-NLGMPESIQEF----VASKGKQQEVYE 98 (99)
Q Consensus 40 g~~i~~vG----d~~n~rv~~Sl~~~~~~~G~~v~~~~P~-~~~~~~~~~~~----a~~~g~~~~~~~ 98 (99)
|++++++| |..++||+||++.++++||+++++++|+ +|.|+++++++ ++++|.++++++
T Consensus 190 g~kv~~~~~~~gd~~~~~Va~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~~g~~i~~~~ 257 (359)
T 3kzn_A 190 GKKYVLTWTYHPKPLNTAVANSALTIATRMGMDVTLLCPTPDYILDERYMDWAAQNVAESGGSLQVSH 257 (359)
T ss_dssp TCEEEEEECCCSSCCCSHHHHHHHHHHHHTTCEEEEECSSGGGCCCHHHHHHHHHHHHHHSCEEEEEC
T ss_pred CCeEEEEEeecCCccccchhhhhHHHHHhccccEEEEecccccCCCHHHHHHHHHHHHhhCCCccccc
Confidence 99998884 5557799999999999999999999995 89899988766 456788888764
No 30
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=94.46 E-value=0.11 Score=36.99 Aligned_cols=52 Identities=15% Similarity=0.194 Sum_probs=41.7
Q ss_pred cCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCe
Q psy4411 36 GRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQ 93 (99)
Q Consensus 36 g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~ 93 (99)
-+++|+++.+||-+. ++.+-+..+...|.++++++|+ +.+++.+.+++.++.
T Consensus 27 l~L~gk~VLVVGgG~---va~~ka~~Ll~~GA~VtVvap~---~~~~l~~l~~~~~i~ 78 (223)
T 3dfz_A 27 LDLKGRSVLVVGGGT---IATRRIKGFLQEGAAITVVAPT---VSAEINEWEAKGQLR 78 (223)
T ss_dssp ECCTTCCEEEECCSH---HHHHHHHHHGGGCCCEEEECSS---CCHHHHHHHHTTSCE
T ss_pred EEcCCCEEEEECCCH---HHHHHHHHHHHCCCEEEEECCC---CCHHHHHHHHcCCcE
Confidence 469999999999864 9999999999999999999995 556665555544443
No 31
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=93.29 E-value=0.52 Score=32.52 Aligned_cols=55 Identities=11% Similarity=0.152 Sum_probs=46.2
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCeEE
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQQE 95 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~~ 95 (99)
.+.+++++++|.+. ++-.++..++.+| +++++.+....+++.+.+.+++.|+++.
T Consensus 138 ~~~~~~v~vvG~G~---~~~e~a~~l~~~g-~v~~v~~~~~~~~~~~~~~l~~~gv~i~ 192 (297)
T 3fbs_A 138 ELDQGKIGVIAASP---MAIHHALMLPDWG-ETTFFTNGIVEPDADQHALLAARGVRVE 192 (297)
T ss_dssp GGTTCEEEEECCST---THHHHHHHGGGTS-EEEEECTTTCCCCHHHHHHHHHTTCEEE
T ss_pred hhcCCEEEEEecCc---cHHHHHHHhhhcC-cEEEEECCCCCCCHHHHHHHHHCCcEEE
Confidence 35789999999865 7778888888899 9999998777788888888999998764
No 32
>2v03_A Cysteine synthase B; pyridoxal phosphate, cysteine biosynthesis, transferase, ENZ kinetics, enzymatic sythesis of novel compounds; HET: LLP CIT; 1.33A {Escherichia coli} PDB: 2bhs_A* 2bht_A* 2jc3_A*
Probab=91.33 E-value=0.69 Score=33.52 Aligned_cols=54 Identities=19% Similarity=0.249 Sum_probs=42.5
Q ss_pred CcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCeEEEEe
Q psy4411 40 GLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQQEVYE 98 (99)
Q Consensus 40 g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~~~~~ 98 (99)
|.+|+-.+. ||...+++.+++++|++++++-|++ .++.-++.++..|+++....
T Consensus 61 g~~vv~~ss---GN~g~a~A~~a~~~G~~~~iv~p~~--~~~~k~~~~~~~Ga~v~~~~ 114 (303)
T 2v03_A 61 GDVLIEATS---GNTGIALAMIAALKGYRMKLLMPDN--MSQERRAAMRAYGAELILVT 114 (303)
T ss_dssp TCEEEEECS---SHHHHHHHHHHHHHTCEEEEEEETT--SCHHHHHHHHHTTCEEEEEC
T ss_pred CCEEEEECC---cHHHHHHHHHHHHcCCcEEEEECCC--CCHHHHHHHHHcCCEEEEEC
Confidence 356666654 3489999999999999999999987 55666677888898887654
No 33
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=91.14 E-value=1.3 Score=32.66 Aligned_cols=41 Identities=15% Similarity=0.122 Sum_probs=35.9
Q ss_pred HHHhcCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCC
Q psy4411 32 KEEMGRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPP 75 (99)
Q Consensus 32 ~e~~g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~ 75 (99)
.|+++ ++|++++.+|-++. +.+.++..+...|++|+++.-.
T Consensus 143 L~~~~-l~Gk~vvVvG~s~i--VG~plA~lL~~~gAtVtv~~~~ 183 (276)
T 3ngx_A 143 MDYYG-YHENTVTIVNRSPV--VGRPLSMMLLNRNYTVSVCHSK 183 (276)
T ss_dssp HHHHT-CCSCEEEEECCCTT--THHHHHHHHHHTTCEEEEECTT
T ss_pred HHHhC-cCCCEEEEEcCChH--HHHHHHHHHHHCCCeEEEEeCC
Confidence 56677 99999999998776 8999999999999999999753
No 34
>1j0a_A 1-aminocyclopropane-1-carboxylate deaminase; PLP dependent, lyase; HET: PLP; 2.50A {Pyrococcus horikoshii} SCOP: c.79.1.1 PDB: 1j0b_A*
Probab=90.77 E-value=0.53 Score=34.40 Aligned_cols=56 Identities=11% Similarity=0.004 Sum_probs=42.3
Q ss_pred cEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCeEEEEe
Q psy4411 41 LTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQQEVYE 98 (99)
Q Consensus 41 ~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~~~~~ 98 (99)
.+|+-.|. ..||...+++.+|+++|++++++-|+.. .++.-++.++..|+++...+
T Consensus 71 ~~vv~~G~-ssGN~g~alA~~a~~~G~~~~iv~p~~~-~~~~k~~~~~~~GA~v~~~~ 126 (325)
T 1j0a_A 71 DVVITVGA-VHSNHAFVTGLAAKKLGLDAILVLRGKE-ELKGNYLLDKIMGIETRVYD 126 (325)
T ss_dssp SEEEEECC-TTCHHHHHHHHHHHHTTCEEEEEEESCC-CSCHHHHHHHHTTCEEEEES
T ss_pred CEEEEcCC-cchHHHHHHHHHHHHhCCcEEEEECCCC-CCCchHHHHHHCCCEEEEeC
Confidence 35555543 3346999999999999999999999875 24455577888898887654
No 35
>1ve1_A O-acetylserine sulfhydrylase; PLP, transferase, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.45A {Thermus thermophilus} SCOP: c.79.1.1 PDB: 2eco_A* 2ecq_A* 2efy_A*
Probab=90.44 E-value=0.58 Score=33.84 Aligned_cols=47 Identities=19% Similarity=0.234 Sum_probs=38.9
Q ss_pred CCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCeEEEEe
Q psy4411 50 KNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQQEVYE 98 (99)
Q Consensus 50 ~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~~~~~ 98 (99)
..||...+++.+++++|++++++.|++ .++.-++.++..|+.+...+
T Consensus 69 ssGN~g~a~A~~a~~~G~~~~i~~p~~--~~~~k~~~~~~~Ga~V~~~~ 115 (304)
T 1ve1_A 69 TSGNTGIGLAMIAASRGYRLILTMPAQ--MSEERKRVLKAFGAELVLTD 115 (304)
T ss_dssp CCSHHHHHHHHHHHHHTCEEEEEEETT--CCHHHHHHHHHTTCEEEEEC
T ss_pred CCcHHHHHHHHHHHHcCCcEEEEeCCC--CCHHHHHHHHHcCCEEEEEC
Confidence 455699999999999999999999987 45666677888899887654
No 36
>2rkb_A Serine dehydratase-like; PLP bound enzyme, enzyme found in human cells, lyase, pyridoxal phosphate; HET: PLP; 2.80A {Homo sapiens}
Probab=90.37 E-value=0.53 Score=34.24 Aligned_cols=54 Identities=9% Similarity=0.082 Sum_probs=41.4
Q ss_pred CcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCeEEEEe
Q psy4411 40 GLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQQEVYE 98 (99)
Q Consensus 40 g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~~~~~ 98 (99)
+.+|+-.+. ||...+++.+++++|++++++-|++ .++.-++.++..|+++...+
T Consensus 54 ~~~vv~~ss---GN~g~alA~~a~~~G~~~~i~~p~~--~~~~k~~~~~~~Ga~V~~~~ 107 (318)
T 2rkb_A 54 CRHLVCSSG---GNAGIAAAYAARKLGIPATIVLPES--TSLQVVQRLQGEGAEVQLTG 107 (318)
T ss_dssp CCEEEECCC---SHHHHHHHHHHHHHTCCEEEEECTT--CCHHHHHHHHHTTCEEEECC
T ss_pred CCEEEEECC---chHHHHHHHHHHHcCCCEEEEECCC--CcHHHHHHHHhcCCEEEEEC
Confidence 345544444 4599999999999999999999987 45666677888898886643
No 37
>1v71_A Serine racemase, hypothetical protein C320.14 in chromosome III; dimer, PLP, isomerase; HET: PLP; 1.70A {Schizosaccharomyces pombe} SCOP: c.79.1.1 PDB: 1wtc_A* 2zpu_A* 2zr8_A*
Probab=90.34 E-value=0.61 Score=34.05 Aligned_cols=46 Identities=17% Similarity=0.309 Sum_probs=38.0
Q ss_pred CchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCeEEEEe
Q psy4411 51 NGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQQEVYE 98 (99)
Q Consensus 51 n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~~~~~ 98 (99)
.||...+++.+++++|++++++-|+.. ++.-++.++..|+++..++
T Consensus 82 sGN~g~alA~~a~~~G~~~~iv~p~~~--~~~k~~~~~~~GA~V~~~~ 127 (323)
T 1v71_A 82 SGNHAQAIALSAKILGIPAKIIMPLDA--PEAKVAATKGYGGQVIMYD 127 (323)
T ss_dssp SSHHHHHHHHHHHHTTCCEEEEEETTC--CHHHHHHHHHTTCEEEEEC
T ss_pred CCcHHHHHHHHHHHcCCCEEEECCCCC--cHHHHHHHHHcCCEEEEEC
Confidence 356999999999999999999999874 4555677888899887654
No 38
>2q3b_A Cysteine synthase A; pyridoxal-5'-phosphate, sulphur metabolism, cysteine biosynthesis, transferase; HET: LLP; 1.80A {Mycobacterium tuberculosis} PDB: 2q3c_A* 2q3d_A* 3rr2_A
Probab=89.89 E-value=0.58 Score=33.97 Aligned_cols=47 Identities=15% Similarity=0.124 Sum_probs=38.2
Q ss_pred CCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCeEEEEe
Q psy4411 50 KNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQQEVYE 98 (99)
Q Consensus 50 ~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~~~~~ 98 (99)
..||...+++.+++++|++++++-|++ .++.-++.++..|+++....
T Consensus 74 ssGN~g~alA~~a~~~G~~~~iv~p~~--~~~~k~~~~~~~Ga~v~~~~ 120 (313)
T 2q3b_A 74 TSGNTGIALAMVCAARGYRCVLTMPET--MSLERRMLLRAYGAELILTP 120 (313)
T ss_dssp CSSHHHHHHHHHHHHHTCEEEEEEETT--SCHHHHHHHHHTTCEEEEEC
T ss_pred CCCHHHHHHHHHHHHcCCcEEEEECCC--CCHHHHHHHHHCCCEEEEeC
Confidence 445699999999999999999999987 45566677888898887653
No 39
>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} SCOP: c.79.1.0 PDB: 3fgp_A* 3dki_A* 3dwi_A*
Probab=89.83 E-value=0.9 Score=33.36 Aligned_cols=59 Identities=27% Similarity=0.206 Sum_probs=43.3
Q ss_pred hcCCC-CcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCeEEEEe
Q psy4411 35 MGRVN-GLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQQEVYE 98 (99)
Q Consensus 35 ~g~l~-g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~~~~~ 98 (99)
.|.++ +.+|+-... ||.+++++.+++++|++++++-|++ .++.-++.++..|+++....
T Consensus 67 ~g~l~~~~~vv~aSs---GN~g~alA~aa~~~G~~~~iv~p~~--~~~~k~~~~~~~GA~V~~~~ 126 (325)
T 3dwg_A 67 DGLLRPGATILEPTS---GNTGISLAMAARLKGYRLICVMPEN--TSVERRQLLELYGAQIIFSA 126 (325)
T ss_dssp TTCCCTTCEEEEECS---SHHHHHHHHHHHHHTCEEEEEEESS--SCHHHHHHHHHHTCEEEEEC
T ss_pred cCCCCCCCEEEEeCC---cHHHHHHHHHHHHcCCcEEEEECCC--CCHHHHHHHHHCCCEEEEEC
Confidence 34443 345555443 4599999999999999999999987 45555677788898887653
No 40
>1y7l_A O-acetylserine sulfhydrylase, O-acetylserine (thiol)-lyase; X-RAY crystallography, sulfhydrylase; HET: LLP; 1.55A {Haemophilus influenzae} SCOP: c.79.1.1 PDB: 3iqg_X* 3iqh_X* 3iqi_X* 1fcj_A* 1oas_A* 1d6s_A*
Probab=89.82 E-value=0.51 Score=34.32 Aligned_cols=53 Identities=19% Similarity=0.176 Sum_probs=41.0
Q ss_pred cEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCeEEEEe
Q psy4411 41 LTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQQEVYE 98 (99)
Q Consensus 41 ~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~~~~~ 98 (99)
.+|+-.+. ||...+++.+++++|++++++-|++ .++.-++.++..|+++....
T Consensus 63 ~~vv~~ss---GN~g~a~A~~a~~~G~~~~iv~p~~--~~~~k~~~~~~~GA~v~~~~ 115 (316)
T 1y7l_A 63 KEIVDATS---GNTGIALAYVAAARGYKITLTMPET--MSLERKRLLCGLGVNLVLTE 115 (316)
T ss_dssp CEEEESCC---SHHHHHHHHHHHHHTCCEEEEEETT--SCHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEeCC---cHHHHHHHHHHHHcCCcEEEEECCC--CCHHHHHHHHHcCCEEEEeC
Confidence 45544443 4599999999999999999999987 55666677888898887653
No 41
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=89.75 E-value=0.96 Score=34.89 Aligned_cols=50 Identities=14% Similarity=0.086 Sum_probs=38.7
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGK 92 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~ 92 (99)
+++|++|.++|-+. ++.+-+..+...|.+|++++|+ +.+++.+.+++.++
T Consensus 9 ~l~~~~vlVvGgG~---va~~k~~~L~~~ga~V~vi~~~---~~~~~~~l~~~~~i 58 (457)
T 1pjq_A 9 QLRDRDCLIVGGGD---VAERKARLLLEAGARLTVNALT---FIPQFTVWANEGML 58 (457)
T ss_dssp CCBTCEEEEECCSH---HHHHHHHHHHHTTBEEEEEESS---CCHHHHHHHTTTSC
T ss_pred ECCCCEEEEECCCH---HHHHHHHHHHhCcCEEEEEcCC---CCHHHHHHHhcCCE
Confidence 57899999999864 9999999999999999999995 34555444333333
No 42
>1z7w_A Cysteine synthase; transferase; HET: PLP; 2.20A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 1z7y_A* 2isq_A*
Probab=89.65 E-value=0.61 Score=34.02 Aligned_cols=46 Identities=20% Similarity=0.146 Sum_probs=38.1
Q ss_pred CchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCeEEEEe
Q psy4411 51 NGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQQEVYE 98 (99)
Q Consensus 51 n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~~~~~ 98 (99)
.||...+++.+++++|++++++-|++ .++.-++.++..|+++...+
T Consensus 75 sGN~g~alA~aa~~~G~~~~iv~p~~--~~~~k~~~~~~~GA~V~~~~ 120 (322)
T 1z7w_A 75 SGNTGVGLAFTAAAKGYKLIITMPAS--MSTERRIILLAFGVELVLTD 120 (322)
T ss_dssp SSHHHHHHHHHHHHHTCEEEEEEETT--SCHHHHHHHHHTTCEEEEEC
T ss_pred CCHHHHHHHHHHHHcCCCEEEEeCCC--CCHHHHHHHHHcCCEEEEeC
Confidence 45699999999999999999999987 45666677888898887653
No 43
>3l6b_A Serine racemase; pyridoxal phosphate, PLP, isomerase; HET: PLP; 1.50A {Homo sapiens} SCOP: c.79.1.0 PDB: 3l6r_A* 3hmk_A* 3l6c_A*
Probab=89.41 E-value=0.75 Score=34.13 Aligned_cols=53 Identities=15% Similarity=0.174 Sum_probs=40.5
Q ss_pred cEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCeEEEEe
Q psy4411 41 LTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQQEVYE 98 (99)
Q Consensus 41 ~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~~~~~ 98 (99)
.+|+-.+. ||.+++++.+|+++|++++++-|++ .++.-++.++..|+++....
T Consensus 77 ~~vv~~Ss---GNhg~a~A~aa~~~G~~~~iv~p~~--~~~~k~~~~~~~GA~V~~v~ 129 (346)
T 3l6b_A 77 KAVVTHSS---GNHGQALTYAAKLEGIPAYIVVPQT--APDCKKLAIQAYGASIVYCE 129 (346)
T ss_dssp SCEEEECS---SHHHHHHHHHHHHTTCCEEEEEETT--SCHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEeCC---CHHHHHHHHHHHHhCCCEEEEECCC--CCHHHHHHHHHCCCEEEEEC
Confidence 34444443 4599999999999999999999987 45555677888898886653
No 44
>1o58_A O-acetylserine sulfhydrylase; TM0665, structural genomics, J protein structure initiative, joint center for structural G transferase; 1.80A {Thermotoga maritima} SCOP: c.79.1.1 PDB: 3fca_A*
Probab=89.21 E-value=0.61 Score=33.81 Aligned_cols=47 Identities=11% Similarity=0.092 Sum_probs=38.6
Q ss_pred CCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCeEEEEe
Q psy4411 50 KNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQQEVYE 98 (99)
Q Consensus 50 ~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~~~~~ 98 (99)
..||...+++.+++++|++++++-|++ .++.-++.++..|+++...+
T Consensus 72 SsGN~g~a~A~aa~~~G~~~~iv~p~~--~~~~k~~~~~~~GA~V~~~~ 118 (303)
T 1o58_A 72 TSGNMGIAIAMIGAKRGHRVILTMPET--MSVERRKVLKMLGAELVLTP 118 (303)
T ss_dssp CSSHHHHHHHHHHHHHTCCEEEEEETT--SCHHHHHHHHHTTCEEEEEC
T ss_pred CchHHHHHHHHHHHHcCCcEEEEECCC--CCHHHHHHHHHcCCEEEEEC
Confidence 445699999999999999999999987 45666677888898887653
No 45
>2egu_A Cysteine synthase; O-acetylserine sulfhydrase, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; 1.90A {Geobacillus kaustophilus}
Probab=89.17 E-value=0.65 Score=33.61 Aligned_cols=47 Identities=19% Similarity=0.174 Sum_probs=38.3
Q ss_pred CCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCeEEEEe
Q psy4411 50 KNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQQEVYE 98 (99)
Q Consensus 50 ~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~~~~~ 98 (99)
..||...+++.+|+++|++++++-|++ .++.-++.++..|+++....
T Consensus 72 ssGN~g~a~A~~a~~~G~~~~iv~p~~--~~~~k~~~~~~~GA~v~~~~ 118 (308)
T 2egu_A 72 TSGNTGIGLAMVAAAKGYKAVLVMPDT--MSLERRNLLRAYGAELVLTP 118 (308)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEEEESC--SCHHHHHHHHHTTCEEEEEC
T ss_pred CCCHHHHHHHHHHHHcCCCEEEEECCC--CCHHHHHHHHHcCCEEEEEC
Confidence 445699999999999999999999987 35556677888898887653
No 46
>2pqm_A Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.86A {Entamoeba histolytica} PDB: 3bm5_A*
Probab=89.13 E-value=0.99 Score=33.40 Aligned_cols=59 Identities=22% Similarity=0.313 Sum_probs=43.9
Q ss_pred hcCCC-CcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCeEEEEe
Q psy4411 35 MGRVN-GLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQQEVYE 98 (99)
Q Consensus 35 ~g~l~-g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~~~~~ 98 (99)
.|.++ |.+|+-.+. ||...+++.+++++|++++++-|++ .++.-++.++..|+.+....
T Consensus 72 ~g~~~~g~~vv~aSs---GN~g~alA~aa~~~G~~~~iv~p~~--~~~~k~~~~~~~GA~V~~~~ 131 (343)
T 2pqm_A 72 DGRLKPGMEIIESTS---GNTGIALCQAGAVFGYRVNIAMPST--MSVERQMIMKAFGAELILTE 131 (343)
T ss_dssp HTSSCTTCEEEEECS---SHHHHHHHHHHHHHTCCEEEEEETT--SCHHHHHHHHHTTCEEEEEC
T ss_pred cCCCCCCCEEEEECC---cHHHHHHHHHHHHcCCCEEEEECCC--CCHHHHHHHHHCCCEEEEEC
Confidence 34433 346655555 3489999999999999999999987 45666677888898887653
No 47
>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3spx_A* 3t4p_A* 4air_A*
Probab=89.12 E-value=0.7 Score=34.14 Aligned_cols=45 Identities=22% Similarity=0.158 Sum_probs=37.0
Q ss_pred chhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCeEEEEe
Q psy4411 52 GRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQQEVYE 98 (99)
Q Consensus 52 ~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~~~~~ 98 (99)
||..++++.+|+++|++++++-|++ .++.-++.++..|+++...+
T Consensus 81 GN~g~alA~aa~~~G~~~~iv~p~~--~~~~k~~~~~~~GA~V~~~~ 125 (334)
T 3tbh_A 81 GNTGVSLAHLGAIRGYKVIITMPES--MSLERRCLLRIFGAEVILTP 125 (334)
T ss_dssp SHHHHHHHHHHHHHTCEEEEEEETT--SCHHHHHHHHHTTCEEEEEC
T ss_pred CHHHHHHHHHHHHhCCCEEEEECCC--CCHHHHHHHHHCCCEEEEEC
Confidence 4599999999999999999999987 45555677888898887653
No 48
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=89.09 E-value=2 Score=32.06 Aligned_cols=44 Identities=14% Similarity=0.133 Sum_probs=37.9
Q ss_pred HHHhc-CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCC
Q psy4411 32 KEEMG-RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNL 77 (99)
Q Consensus 32 ~e~~g-~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~ 77 (99)
.++.+ +++|++++.+|-.+- |.+-++.++..-++.|++|+-..-
T Consensus 170 L~~~~i~l~Gk~vvViGRS~i--VGkPla~LL~~~~ATVTi~Hs~T~ 214 (303)
T 4b4u_A 170 LKENNIEIAGKHAVVVGRSAI--LGKPMAMMLLQANATVTICHSRTQ 214 (303)
T ss_dssp HHHTTCCCTTCEEEEECCCTT--THHHHHHHHHHTTCEEEEECTTCS
T ss_pred HHHHCCCCCCCEEEEEecccc--ccchHHHHHHhcCCEEEEecCCCC
Confidence 34555 799999999999887 999999999999999999987654
No 49
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=88.85 E-value=2.2 Score=31.52 Aligned_cols=41 Identities=17% Similarity=0.172 Sum_probs=35.3
Q ss_pred HHHhc-CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 32 KEEMG-RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 32 ~e~~g-~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
.|+.+ +++|++++.+|-++. +.+.++.++...|++|+++.-
T Consensus 152 L~~~~i~l~Gk~vvVvGrs~i--VG~plA~lL~~~gAtVtv~hs 193 (286)
T 4a5o_A 152 LASTGADLYGMDAVVVGASNI--VGRPMALELLLGGCTVTVTHR 193 (286)
T ss_dssp HHHTTCCCTTCEEEEECTTST--THHHHHHHHHHTTCEEEEECT
T ss_pred HHHhCCCCCCCEEEEECCCch--hHHHHHHHHHHCCCeEEEEeC
Confidence 34554 699999999998776 899999999999999999964
No 50
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=88.67 E-value=1.2 Score=31.42 Aligned_cols=55 Identities=7% Similarity=0.015 Sum_probs=42.7
Q ss_pred CCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCC-CCCCHHHHHHHHhcCCeEE
Q psy4411 38 VNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPN-LGMPESIQEFVASKGKQQE 95 (99)
Q Consensus 38 l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~-~~~~~~~~~~a~~~g~~~~ 95 (99)
..+++++++|.+. ++-.++..++.+|.+++++.+.. +..++.+.+.+++.|+++.
T Consensus 153 ~~~~~v~viG~G~---~g~e~a~~l~~~g~~V~~i~~~~~~~~~~~l~~~l~~~gv~i~ 208 (319)
T 3cty_A 153 FKGKRVVTIGGGN---SGAIAAISMSEYVKNVTIIEYMPKYMCENAYVQEIKKRNIPYI 208 (319)
T ss_dssp GBTSEEEEECCSH---HHHHHHHHHTTTBSEEEEECSSSSCCSCHHHHHHHHHTTCCEE
T ss_pred cCCCeEEEECCCH---HHHHHHHHHHhhCCcEEEEEcCCccCCCHHHHHHHhcCCcEEE
Confidence 4568999999754 77778888889999999998754 4456777788888887763
No 51
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=88.45 E-value=1 Score=32.98 Aligned_cols=36 Identities=11% Similarity=0.188 Sum_probs=31.9
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPP 75 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~ 75 (99)
.+.|+||+++|=++ +.++++..+..||++|....|.
T Consensus 121 ~l~g~~vgIIG~G~---IG~~~A~~l~~~G~~V~~~dr~ 156 (303)
T 1qp8_A 121 LIQGEKVAVLGLGE---IGTRVGKILAALGAQVRGFSRT 156 (303)
T ss_dssp CCTTCEEEEESCST---HHHHHHHHHHHTTCEEEEECSS
T ss_pred CCCCCEEEEEccCH---HHHHHHHHHHHCCCEEEEECCC
Confidence 58899999999754 9999999999999999988763
No 52
>4d9i_A Diaminopropionate ammonia-lyase; fold type II PLP-dependent enzyme, tryptophan synthase beta like PLP-dependent enzymes superfamily; HET: IT1; 2.00A {Escherichia coli} PDB: 4d9g_A* 4d9n_A* 4d9k_A* 4d9m_A*
Probab=88.29 E-value=0.95 Score=34.17 Aligned_cols=46 Identities=11% Similarity=0.058 Sum_probs=37.4
Q ss_pred CCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCeEEEE
Q psy4411 50 KNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQQEVY 97 (99)
Q Consensus 50 ~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~~~~ 97 (99)
..||..++++.+++++|++.+++-|++ .++.-++.++..|+.+...
T Consensus 119 SsGNhg~a~A~aa~~~G~~~~iv~p~~--~~~~k~~~~~~~GA~Vv~v 164 (398)
T 4d9i_A 119 TDGNHGRGVAWAAQQLGQNAVIYMPKG--SAQERVDAILNLGAECIVT 164 (398)
T ss_dssp CSSHHHHHHHHHHHHHTCEEEEEECTT--CCHHHHHHHHTTTCEEEEC
T ss_pred CCCHHHHHHHHHHHHcCCCEEEEEeCC--CCHHHHHHHHHcCCEEEEE
Confidence 344599999999999999999999986 4566667788888888654
No 53
>4h27_A L-serine dehydratase/L-threonine deaminase; PLP dependent typeii, PLP binding, liver, lyase; HET: LLP; 1.30A {Homo sapiens} PDB: 1p5j_A* 1pwh_A* 1pwe_A*
Probab=88.25 E-value=0.79 Score=34.30 Aligned_cols=52 Identities=17% Similarity=0.147 Sum_probs=40.3
Q ss_pred cEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCeEEEE
Q psy4411 41 LTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQQEVY 97 (99)
Q Consensus 41 ~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~~~~ 97 (99)
.+|+-.+. ||...+++.+++++|++++++-|++ .++.-++.++..|+++...
T Consensus 94 ~~vv~aSs---GN~g~alA~aa~~~G~~~~iv~p~~--~~~~k~~~~~~~GA~Vv~v 145 (364)
T 4h27_A 94 AHFVCSSS---GNAGMAAAYAARQLGVPATIVVPGT--TPALTIERLKNEGATVKVV 145 (364)
T ss_dssp CEEEECCS---SHHHHHHHHHHHHHTCCEEEEEETT--SCHHHHHHHHTTTCEEEEE
T ss_pred CEEEEeCC---ChHHHHHHHHHHHhCCceEEEECCC--CCHHHHHHHHHcCCEEEEE
Confidence 34444444 4589999999999999999999987 4566667788889888654
No 54
>2gn0_A Threonine dehydratase catabolic; TDCB, biodegradative threonine deaminase, PLP, threonine DEH L-threonine metabolism; HET: LLP; 1.70A {Salmonella typhimurium} PDB: 2gn1_A* 2gn2_A*
Probab=88.23 E-value=0.77 Score=33.93 Aligned_cols=46 Identities=11% Similarity=0.127 Sum_probs=37.5
Q ss_pred CchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCeEEEEe
Q psy4411 51 NGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQQEVYE 98 (99)
Q Consensus 51 n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~~~~~ 98 (99)
.||...+++.+++++|++++++-|++ .++.-++.++..|+++...+
T Consensus 96 sGN~g~alA~aa~~~G~~~~iv~p~~--~~~~k~~~~~~~GA~V~~~~ 141 (342)
T 2gn0_A 96 AGNHAQGVSLSCAMLGIDGKVVMPKG--APKSKVAATCDYSAEVVLHG 141 (342)
T ss_dssp SSHHHHHHHHHHHHHTCCEEEEECTT--SCHHHHHHHHHHSCEEEECC
T ss_pred CChHHHHHHHHHHHcCCCEEEEECCC--CCHHHHHHHHHcCCEEEEEC
Confidence 45699999999999999999999987 45666677888888886543
No 55
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=88.04 E-value=2.7 Score=31.12 Aligned_cols=43 Identities=14% Similarity=0.091 Sum_probs=36.2
Q ss_pred HHHhc-CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCC
Q psy4411 32 KEEMG-RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPN 76 (99)
Q Consensus 32 ~e~~g-~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~ 76 (99)
.++.+ +++|++++.+|-++. |.+.++..+...|++|+++.-..
T Consensus 150 l~~~~i~l~gk~vvVIG~s~i--VG~p~A~lL~~~gAtVtv~hs~t 193 (288)
T 1b0a_A 150 LERYNIDTFGLNAVVIGASNI--VGRPMSMELLLAGCTTTVTHRFT 193 (288)
T ss_dssp HHHTTCCCTTCEEEEECCCTT--THHHHHHHHHTTTCEEEEECSSC
T ss_pred HHHcCCCCCCCEEEEECCChH--HHHHHHHHHHHCCCeEEEEeCCc
Confidence 34554 799999999999876 89999999999999999997433
No 56
>1p5j_A L-serine dehydratase; lyase; HET: PLP; 2.50A {Homo sapiens} SCOP: c.79.1.1 PDB: 1pwh_A* 1pwe_A*
Probab=87.62 E-value=1 Score=33.79 Aligned_cols=52 Identities=17% Similarity=0.132 Sum_probs=40.4
Q ss_pred cEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCeEEEE
Q psy4411 41 LTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQQEVY 97 (99)
Q Consensus 41 ~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~~~~ 97 (99)
.+|+-.+. ||...+++.+|+++|++++++-|++. ++.-++.++..|+++...
T Consensus 94 ~~vv~aSs---GN~g~alA~aa~~~G~~~~iv~p~~~--~~~k~~~~~~~GA~V~~~ 145 (372)
T 1p5j_A 94 AHFVCSSA---GNAGMAAAYAARQLGVPATIVVPGTT--PALTIERLKNEGATCKVV 145 (372)
T ss_dssp CEEEECCS---SHHHHHHHHHHHHHTCCEEEEECTTC--CHHHHHHHHHTTCEEEEC
T ss_pred CEEEEeCC---CHHHHHHHHHHHHcCCcEEEEECCCC--CHHHHHHHHhcCCEEEEE
Confidence 44444444 45999999999999999999999873 566667788889888654
No 57
>3aey_A Threonine synthase; PLP, pyridoxal phosphate, lyase; 1.92A {Thermus thermophilus} PDB: 1uin_A* 1uim_A* 3aex_A* 1v7c_A
Probab=87.61 E-value=1.3 Score=32.71 Aligned_cols=48 Identities=17% Similarity=0.060 Sum_probs=38.8
Q ss_pred CCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCeEEEEe
Q psy4411 50 KNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQQEVYE 98 (99)
Q Consensus 50 ~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~~~~~ 98 (99)
..||...+++..++++|++++++-|++. .++.-++.++..|+++...+
T Consensus 84 SsGN~g~alA~~a~~~G~~~~iv~p~~~-~~~~k~~~~~~~GA~V~~v~ 131 (351)
T 3aey_A 84 STGNTAASAAAYAARAGILAIVVLPAGY-VALGKVAQSLVHGARIVQVE 131 (351)
T ss_dssp CSSHHHHHHHHHHHHHTSEEEEEEETTC-SCHHHHHHHHHTTCEEEEEE
T ss_pred CCCHHHHHHHHHHHHcCCCEEEEECCCC-CCHHHHHHHHHcCCEEEEEC
Confidence 4567999999999999999999999874 45555677888898886654
No 58
>1f2d_A 1-aminocyclopropane-1-carboxylate deaminase; carbon-carbon L open twisted alpha/beta, lyase; HET: PLP; 2.00A {Williopsis saturnus} SCOP: c.79.1.1 PDB: 1j0e_A* 1j0d_A* 1j0c_A*
Probab=87.50 E-value=1 Score=33.15 Aligned_cols=56 Identities=14% Similarity=0.124 Sum_probs=40.5
Q ss_pred EEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCC-----CC----HHHHHHHHhcCCeEEEEe
Q psy4411 42 TITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLG-----MP----ESIQEFVASKGKQQEVYE 98 (99)
Q Consensus 42 ~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~-----~~----~~~~~~a~~~g~~~~~~~ 98 (99)
+|+-.|. ..||.+.+++.+|+++|++++++-|+... .. ..-++.++..|+++...+
T Consensus 69 ~vv~~G~-ssGN~g~alA~~a~~~G~~~~iv~p~~~~~~~~~~~~~~~~~k~~~~~~~GA~v~~~~ 133 (341)
T 1f2d_A 69 HLVSIGG-RQSNQTRMVAALAAKLGKKCVLIQEDWVPIPEAEKDVYNRVGNIELSRIMGADVRVIE 133 (341)
T ss_dssp EEEEEEE-TTCHHHHHHHHHHHHHTCEEEEEEECCSCCCGGGTTTTTTSHHHHHHHHTTCEEEECC
T ss_pred EEEEcCC-cchHHHHHHHHHHHHhCCceEEEeccCCCccccccccccccccHHHHHhCCCEEEEeC
Confidence 5554554 33469999999999999999999997663 11 224566788888887653
No 59
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=87.42 E-value=0.46 Score=34.79 Aligned_cols=37 Identities=22% Similarity=0.178 Sum_probs=33.7
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPN 76 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~ 76 (99)
+++|++|.+||.+. ++.+.+..+...|.+|++++|+.
T Consensus 10 ~l~~k~VLVVGgG~---va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 10 QLKDKRILLIGGGE---VGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp CCTTCEEEEEEESH---HHHHHHHHHGGGTCEEEEEEEEE
T ss_pred EcCCCEEEEECCcH---HHHHHHHHHHhCCCEEEEEcCCC
Confidence 58899999999865 99999999999999999999954
No 60
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=87.38 E-value=0.87 Score=33.35 Aligned_cols=36 Identities=19% Similarity=0.271 Sum_probs=31.9
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPP 75 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~ 75 (99)
.+.|++|+++|=+ ++.++++..+..+|++|....|.
T Consensus 139 ~l~g~~vgIiG~G---~IG~~~A~~l~~~G~~V~~~d~~ 174 (307)
T 1wwk_A 139 ELEGKTIGIIGFG---RIGYQVAKIANALGMNILLYDPY 174 (307)
T ss_dssp CCTTCEEEEECCS---HHHHHHHHHHHHTTCEEEEECSS
T ss_pred ccCCceEEEEccC---HHHHHHHHHHHHCCCEEEEECCC
Confidence 5889999999975 49999999999999999988874
No 61
>1ve5_A Threonine deaminase; riken structural genomics/Pro initiative, RSGI, structural genomics, lyase; HET: PLP; 2.15A {Thermus thermophilus} SCOP: c.79.1.1
Probab=87.18 E-value=0.56 Score=33.95 Aligned_cols=52 Identities=15% Similarity=0.124 Sum_probs=37.6
Q ss_pred CcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCeEEE
Q psy4411 40 GLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQQEV 96 (99)
Q Consensus 40 g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~~~ 96 (99)
+.+|+-.+ .||...+++.+++++|++++++-|++. ++.-++.++..|.++..
T Consensus 65 ~~~vv~~s---sGN~g~alA~~a~~~G~~~~iv~p~~~--~~~k~~~~~~~GA~V~~ 116 (311)
T 1ve5_A 65 PKGLLAVS---SGNHAQGVAYAAQVLGVKALVVMPEDA--SPYKKACARAYGAEVVD 116 (311)
T ss_dssp CCCEEEEC---SSHHHHHHHHHHHHHTCCEEEECCCC----CCHHHHHHHTTCEEEC
T ss_pred CCeEEEEC---CCcHHHHHHHHHHHcCCCEEEEECCCC--CHHHHHHHHHcCCEEEE
Confidence 34455444 345999999999999999999999874 33345667777887754
No 62
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=87.05 E-value=3 Score=30.76 Aligned_cols=42 Identities=14% Similarity=0.195 Sum_probs=35.3
Q ss_pred HHHhc-CCCCcEEEEECCCCCchhHHHHHHHHhhC--CCEEEEECCC
Q psy4411 32 KEEMG-RVNGLTITMVGDLKNGRTVHSLARLLTLY--DVKLNYVSPP 75 (99)
Q Consensus 32 ~e~~g-~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~--G~~v~~~~P~ 75 (99)
.++.+ +++|++++.+|-++. |.+.++..+... |.+|+++.-.
T Consensus 149 l~~~~i~l~gk~vvVvG~s~i--VG~p~A~lL~~~g~~atVtv~h~~ 193 (281)
T 2c2x_A 149 LRRYDISIAGAHVVVIGRGVT--VGRPLGLLLTRRSENATVTLCHTG 193 (281)
T ss_dssp HHHTTCCCTTCEEEEECCCTT--THHHHHHHHTSTTTCCEEEEECTT
T ss_pred HHHcCCCCCCCEEEEECCCcH--HHHHHHHHHhcCCCCCEEEEEECc
Confidence 35556 799999999998776 889999999999 8999999643
No 63
>2d1f_A Threonine synthase; amino acid synthesis, pyridoxal-5'-phosphate, PLP, lyase; HET: PLP; 2.50A {Mycobacterium tuberculosis}
Probab=87.04 E-value=1.5 Score=32.63 Aligned_cols=47 Identities=13% Similarity=0.054 Sum_probs=38.0
Q ss_pred CCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCeEEEE
Q psy4411 50 KNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQQEVY 97 (99)
Q Consensus 50 ~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~~~~ 97 (99)
..||...+++..++++|++++++-|++. .++.-++.++..|+++...
T Consensus 92 SsGN~g~alA~~a~~~G~~~~i~~p~~~-~~~~k~~~~~~~GA~v~~v 138 (360)
T 2d1f_A 92 STGNTSASAAAYAARAGITCAVLIPQGK-IAMGKLAQAVMHGAKIIQI 138 (360)
T ss_dssp CSSHHHHHHHHHHHHHTCEEEEEECSSC-CCHHHHHHHHHTTCEEEEB
T ss_pred CCcHHHHHHHHHHHHcCCcEEEEEcCCC-CCHHHHHHHHHcCCEEEEE
Confidence 4556999999999999999999999874 4555567788888887654
No 64
>2zsj_A Threonine synthase; PLP dependent enzyme, lyase; HET: PLP; 1.80A {Aquifex aeolicus}
Probab=87.01 E-value=1.6 Score=32.15 Aligned_cols=48 Identities=13% Similarity=0.046 Sum_probs=38.5
Q ss_pred CCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCeEEEEe
Q psy4411 50 KNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQQEVYE 98 (99)
Q Consensus 50 ~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~~~~~ 98 (99)
..||...+++..++++|++++++-|++. .++.-++.++..|+++...+
T Consensus 86 SsGN~g~alA~~a~~~G~~~~i~~p~~~-~~~~k~~~~~~~GA~v~~v~ 133 (352)
T 2zsj_A 86 STGNTSASAAAYAARAGLRAYVLLPKGA-VAIGKLSQAMIYGAKVLAIQ 133 (352)
T ss_dssp CSSHHHHHHHHHHHHHTCEEEEEEEGGG-CCHHHHHHHHHTTCEEEEES
T ss_pred CCchHHHHHHHHHHhcCCcEEEEECCCC-CCHHHHHHHHHcCCEEEEEC
Confidence 4567999999999999999999999863 45555677888888886553
No 65
>3ss7_X D-serine dehydratase; type II fold, ALFA,beta-elimination, P 5'-phosphate, lyase; HET: PLP; 1.55A {Escherichia coli} PDB: 3ss9_X* 3r0x_A* 3r0z_A
Probab=86.88 E-value=1.2 Score=34.30 Aligned_cols=52 Identities=13% Similarity=0.041 Sum_probs=40.2
Q ss_pred EEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCeEEEEe
Q psy4411 42 TITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQQEVYE 98 (99)
Q Consensus 42 ~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~~~~~ 98 (99)
+|+-...+ |...|++..++++|++++++-|++ .++.-++.++..|+++..++
T Consensus 162 ~vv~aSsG---Nhg~avA~~aa~~G~~~~Ivmp~~--~~~~k~~~~r~~GA~Vv~v~ 213 (442)
T 3ss7_X 162 SIAVGSTG---NLGLSIGIMSARIGFKVTVHMSAD--ARAWKKAKLRSHGVTVVEYE 213 (442)
T ss_dssp EEEEECSS---HHHHHHHHHHHHHTCEEEEEEETT--SCHHHHHHHHHTTCEEEEES
T ss_pred EEEEECCC---HHHHHHHHHHHHhCCcEEEEECCC--CCHHHHHHHHHCCCEEEEEC
Confidence 55544443 489999999999999999999986 45556677888898886653
No 66
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=86.85 E-value=1.1 Score=32.93 Aligned_cols=36 Identities=19% Similarity=0.119 Sum_probs=31.9
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPP 75 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~ 75 (99)
.+.|++|+++|=+ ++.++++..+..+|++|....|.
T Consensus 139 ~l~g~~vgIIG~G---~IG~~~A~~l~~~G~~V~~~d~~ 174 (313)
T 2ekl_A 139 ELAGKTIGIVGFG---RIGTKVGIIANAMGMKVLAYDIL 174 (313)
T ss_dssp CCTTCEEEEESCS---HHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCCCCEEEEEeeC---HHHHHHHHHHHHCCCEEEEECCC
Confidence 5889999999975 49999999999999999988874
No 67
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=86.84 E-value=2.1 Score=32.36 Aligned_cols=38 Identities=24% Similarity=0.358 Sum_probs=31.9
Q ss_pred HHhc--CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEEC
Q psy4411 33 EEMG--RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVS 73 (99)
Q Consensus 33 e~~g--~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~ 73 (99)
+.+| +++|++|+++|-+ +|....+..+..+|++|+++-
T Consensus 164 ~~~G~~~L~GktV~V~G~G---~VG~~~A~~L~~~GakVvv~D 203 (364)
T 1leh_A 164 EAFGSDSLEGLAVSVQGLG---NVAKALCKKLNTEGAKLVVTD 203 (364)
T ss_dssp HHHSSCCCTTCEEEEECCS---HHHHHHHHHHHHTTCEEEEEC
T ss_pred hhccccCCCcCEEEEECch---HHHHHHHHHHHHCCCEEEEEc
Confidence 3357 6999999999974 399999999999999988553
No 68
>3iau_A Threonine deaminase; pyridoxal phosphate, amino-acid biosynthesis, defensive PROT jasmonic acid pathway, jasmonic acid,structural genomics; HET: LLP 15P; 2.35A {Solanum lycopersicum}
Probab=86.81 E-value=1.4 Score=32.80 Aligned_cols=51 Identities=16% Similarity=0.203 Sum_probs=39.5
Q ss_pred EEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCeEEEE
Q psy4411 42 TITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQQEVY 97 (99)
Q Consensus 42 ~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~~~~ 97 (99)
+|+-.+. ||..++++.+++++|++++++-|+. .++.-.+.++..|+++...
T Consensus 110 ~vv~ass---GN~g~a~A~aa~~~G~~~~iv~P~~--~~~~k~~~~~~~GA~V~~v 160 (366)
T 3iau_A 110 GVITASA---GNHAQGVALAGQRLNCVAKIVMPTT--TPQIKIDAVRALGGDVVLY 160 (366)
T ss_dssp CEEEECS---SHHHHHHHHHHHHTTCCEEEEECTT--CCHHHHHHHHHTTCEEEEC
T ss_pred EEEEeCC---CHHHHHHHHHHHHhCCceEEEeCCC--CCHHHHHHHHHCCCeEEEE
Confidence 4544444 4599999999999999999999985 4565667788888887654
No 69
>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana}
Probab=86.78 E-value=1.1 Score=34.72 Aligned_cols=53 Identities=15% Similarity=0.132 Sum_probs=41.1
Q ss_pred cEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCeEEEEe
Q psy4411 41 LTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQQEVYE 98 (99)
Q Consensus 41 ~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~~~~~ 98 (99)
.+|+-.+. ||.+++++.+++++|++++++-|+. .++.-++.++..|+++...+
T Consensus 176 ~~VV~aSs---GNhG~AlA~aAa~~Gl~~~IvmP~~--~s~~k~~~~r~~GAeVv~v~ 228 (430)
T 4aec_A 176 SVLVEPTS---GNTGIGLAFIAASRGYRLILTMPAS--MSMERRVLLKAFGAELVLTD 228 (430)
T ss_dssp CEEEEECS---SHHHHHHHHHHHHHTCEEEEEEETT--SCHHHHHHHHHTTCEEEEEC
T ss_pred cEEEEECC---CHHHHHHHHHHHHhCCEEEEEEcCC--CCHHHHHHHHHCCCEEEEEC
Confidence 34444444 3599999999999999999999987 45666677888899887653
No 70
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=86.75 E-value=2.2 Score=33.28 Aligned_cols=36 Identities=14% Similarity=0.051 Sum_probs=31.7
Q ss_pred cCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 36 GRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 36 g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
..+.|++|+++|-+ ++.++.+..+..||++|.++-|
T Consensus 207 ~~L~GktVgIiG~G---~IG~~vA~~Lka~Ga~Viv~D~ 242 (436)
T 3h9u_A 207 VMIAGKTACVCGYG---DVGKGCAAALRGFGARVVVTEV 242 (436)
T ss_dssp CCCTTCEEEEECCS---HHHHHHHHHHHHTTCEEEEECS
T ss_pred CcccCCEEEEEeeC---HHHHHHHHHHHHCCCEEEEECC
Confidence 35899999999954 4999999999999999988776
No 71
>4d9b_A D-cysteine desulfhydrase; fold type II PLP-dependent enzyme or tryptophan synthase BET like family, PLP dependent enzyme, lyase; HET: PMP; 1.67A {Salmonella typhimurium} PDB: 4d96_A* 4d9c_A* 4d9e_A* 4d9f_A* 4d97_A* 4d8w_A* 4d8u_A* 4d8t_A* 4d92_A* 4d99_A*
Probab=86.71 E-value=1.2 Score=32.94 Aligned_cols=46 Identities=13% Similarity=0.083 Sum_probs=35.0
Q ss_pred chhHHHHHHHHhhCCCEEEEECCCCCCCC-H-----HHHHHHHhcCCeEEEE
Q psy4411 52 GRTVHSLARLLTLYDVKLNYVSPPNLGMP-E-----SIQEFVASKGKQQEVY 97 (99)
Q Consensus 52 ~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~-~-----~~~~~a~~~g~~~~~~ 97 (99)
||.+.+++.+|+++|++++++-|+..... + .-++.++..|+++..+
T Consensus 92 GN~g~alA~aa~~~G~~~~iv~p~~~~~~~~~~~~~~k~~~~~~~GA~V~~~ 143 (342)
T 4d9b_A 92 SNHVRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLDLFNTQIEMC 143 (342)
T ss_dssp CHHHHHHHHHHHHHTCEEEEEEECTTCCCCHHHHHSHHHHHHHHTTCEEEEC
T ss_pred cHHHHHHHHHHHHhCCcEEEEEeCCCCCccccccccchHHHHHHCCCEEEEE
Confidence 35999999999999999999999776432 1 2345577788887665
No 72
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=86.64 E-value=0.94 Score=33.20 Aligned_cols=36 Identities=11% Similarity=0.158 Sum_probs=32.3
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPP 75 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~ 75 (99)
.+.|+||+++|=+. +.++++..+..||++|....|.
T Consensus 119 ~l~g~tvGIIGlG~---IG~~vA~~l~~~G~~V~~~dr~ 154 (290)
T 3gvx_A 119 LLYGKALGILGYGG---IGRRVAHLAKAFGMRVIAYTRS 154 (290)
T ss_dssp CCTTCEEEEECCSH---HHHHHHHHHHHHTCEEEEECSS
T ss_pred eeecchheeeccCc---hhHHHHHHHHhhCcEEEEEecc
Confidence 48899999999854 9999999999999999999874
No 73
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=86.38 E-value=2.9 Score=29.12 Aligned_cols=55 Identities=11% Similarity=0.113 Sum_probs=42.0
Q ss_pred CCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCC-CCCCHHHHHHHHhcCCeEE
Q psy4411 38 VNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPN-LGMPESIQEFVASKGKQQE 95 (99)
Q Consensus 38 l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~-~~~~~~~~~~a~~~g~~~~ 95 (99)
+.+++++++|.+. ++-.++..++.+|.+++++.+.. +...+...+.+++.|+.+.
T Consensus 152 ~~~~~v~vvG~g~---~~~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~l~~~gv~~~ 207 (332)
T 3lzw_A 152 FAGRRVAILGGGD---SAVDWALMLEPIAKEVSIIHRRDKFRAHEHSVENLHASKVNVL 207 (332)
T ss_dssp GBTCEEEEECSSH---HHHHHHHHHTTTBSEEEEECSSSSCSSCHHHHHHHHHSSCEEE
T ss_pred cCCCEEEEECCCH---hHHHHHHHHHhhCCeEEEEEecCcCCccHHHHHHHhcCCeEEE
Confidence 4678999999754 77888888899999999998743 3345566677888887663
No 74
>1tzj_A ACC deaminase, 1-aminocyclopropane-1-carboxylate deaminase; substrate, PLP, crystal, complex, hydrolase; HET: PLP; 1.99A {Pseudomonas SP} SCOP: c.79.1.1 PDB: 1rqx_A* 1tz2_A* 1tyz_A* 1tzk_A* 1tzm_A*
Probab=86.25 E-value=1.3 Score=32.34 Aligned_cols=55 Identities=11% Similarity=0.106 Sum_probs=39.4
Q ss_pred EEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCC------HHHHHHHHhcCCeEEEE
Q psy4411 42 TITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMP------ESIQEFVASKGKQQEVY 97 (99)
Q Consensus 42 ~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~------~~~~~~a~~~g~~~~~~ 97 (99)
+|+-.|- ..||...+++.+++++|++++++.|+..... ..-++.++..|+++...
T Consensus 69 ~vv~~Ga-ssGN~g~alA~~a~~~G~~~~iv~p~~~~~~~~~~~~~~k~~~~~~~GA~V~~~ 129 (338)
T 1tzj_A 69 TLVSIGG-IQSNQTRQVAAVAAHLGMKCVLVQENWVNYSDAVYDRVGNIQMSRILGADVRLV 129 (338)
T ss_dssp EEEEEEE-TTCHHHHHHHHHHHHHTCEEEEEEECCSSCCCTTTTTSHHHHHHHHTTCEEEEC
T ss_pred EEEEcCC-chhHHHHHHHHHHHHhCCceEEEecCCCCccccccccCccHHHHHhCCCEEEEe
Confidence 4544443 3346999999999999999999999876322 12446677788887654
No 75
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=86.22 E-value=1.2 Score=33.15 Aligned_cols=36 Identities=19% Similarity=0.205 Sum_probs=32.2
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPP 75 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~ 75 (99)
.+.|+||+++|=++ +.++++..+..||++|....|.
T Consensus 137 ~l~g~tvGIIGlG~---IG~~vA~~l~~~G~~V~~~dr~ 172 (324)
T 3hg7_A 137 GLKGRTLLILGTGS---IGQHIAHTGKHFGMKVLGVSRS 172 (324)
T ss_dssp CSTTCEEEEECCSH---HHHHHHHHHHHTTCEEEEECSS
T ss_pred ccccceEEEEEECH---HHHHHHHHHHhCCCEEEEEcCC
Confidence 58899999999864 9999999999999999998764
No 76
>1jbq_A B, cystathionine beta-synthase, serine sulfhydrase; fold type II of PLP enzymes, lyase; HET: HEM PLP; 2.60A {Homo sapiens} SCOP: c.79.1.1 PDB: 1m54_A*
Probab=86.15 E-value=1.6 Score=33.78 Aligned_cols=58 Identities=19% Similarity=0.101 Sum_probs=42.6
Q ss_pred hcCCC-CcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCeEEEE
Q psy4411 35 MGRVN-GLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQQEVY 97 (99)
Q Consensus 35 ~g~l~-g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~~~~ 97 (99)
.|.++ +.+|+-...+ |...+++.+++++|++++++-|+. .++.-++.++..|+.+...
T Consensus 155 ~G~l~~g~tVV~aSsG---N~G~AlA~aaa~~Gi~~~IvmP~~--~s~~k~~~l~~~GAeVv~v 213 (435)
T 1jbq_A 155 DGTLKPGDTIIEPTSG---NTGIGLALAAAVRGYRCIIVMPEK--MSSEKVDVLRALGAEIVRT 213 (435)
T ss_dssp HTCSCTTCEEEEECSS---HHHHHHHHHHHHHTCEEEEEECSC--CCHHHHHHHHHTTCEEEEC
T ss_pred cCCCCCCCEEEEeCCC---HHHHHHHHHHHHcCCeEEEEeCCC--CCHHHHHHHHhCCCEEEEe
Confidence 45444 3455444443 489999999999999999999987 4555667788888888654
No 77
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=86.05 E-value=1.1 Score=32.84 Aligned_cols=36 Identities=22% Similarity=0.387 Sum_probs=31.6
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPP 75 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~ 75 (99)
.+.|++|+++|=+ ++.++++..+..+|+++....|.
T Consensus 141 ~l~g~~vgIIG~G---~IG~~~A~~l~~~G~~V~~~d~~ 176 (311)
T 2cuk_A 141 DLQGLTLGLVGMG---RIGQAVAKRALAFGMRVVYHART 176 (311)
T ss_dssp CCTTCEEEEECCS---HHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCCCCEEEEEEEC---HHHHHHHHHHHHCCCEEEEECCC
Confidence 4888999999975 49999999999999999988774
No 78
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=86.02 E-value=1.1 Score=33.04 Aligned_cols=35 Identities=17% Similarity=0.320 Sum_probs=31.4
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
.+.|++|+++|=++ +.++++..+..+|++|....|
T Consensus 143 ~l~g~~vgIIG~G~---IG~~~A~~l~~~G~~V~~~d~ 177 (320)
T 1gdh_A 143 KLDNKTLGIYGFGS---IGQALAKRAQGFDMDIDYFDT 177 (320)
T ss_dssp CCTTCEEEEECCSH---HHHHHHHHHHTTTCEEEEECS
T ss_pred CCCCCEEEEECcCH---HHHHHHHHHHHCCCEEEEECC
Confidence 48899999999754 999999999999999998877
No 79
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=86.02 E-value=1 Score=34.19 Aligned_cols=36 Identities=22% Similarity=0.306 Sum_probs=32.0
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPP 75 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~ 75 (99)
.+.|+||+++|=+. +.++++..+..||++|....|.
T Consensus 173 ~l~gktvGIIGlG~---IG~~vA~~l~~fG~~V~~~d~~ 208 (365)
T 4hy3_A 173 LIAGSEIGIVGFGD---LGKALRRVLSGFRARIRVFDPW 208 (365)
T ss_dssp CSSSSEEEEECCSH---HHHHHHHHHTTSCCEEEEECSS
T ss_pred ccCCCEEEEecCCc---ccHHHHHhhhhCCCEEEEECCC
Confidence 47899999999754 9999999999999999998874
No 80
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=85.99 E-value=0.84 Score=33.92 Aligned_cols=37 Identities=16% Similarity=0.189 Sum_probs=32.2
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPN 76 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~ 76 (99)
.+.|+||+++|=+ ++.++++..+..||++|....|..
T Consensus 142 ~l~g~tvGIIG~G---~IG~~vA~~l~~~G~~V~~~d~~~ 178 (330)
T 4e5n_A 142 GLDNATVGFLGMG---AIGLAMADRLQGWGATLQYHEAKA 178 (330)
T ss_dssp CSTTCEEEEECCS---HHHHHHHHHTTTSCCEEEEECSSC
T ss_pred ccCCCEEEEEeeC---HHHHHHHHHHHHCCCEEEEECCCC
Confidence 3789999999975 499999999999999999988743
No 81
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=85.69 E-value=1.2 Score=33.53 Aligned_cols=35 Identities=14% Similarity=0.096 Sum_probs=31.5
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
.+.|+||+++|=+. +.++++..+..||++|....|
T Consensus 157 ~l~g~tvGIIGlG~---IG~~vA~~l~~~G~~V~~~d~ 191 (352)
T 3gg9_A 157 VLKGQTLGIFGYGK---IGQLVAGYGRAFGMNVLVWGR 191 (352)
T ss_dssp CCTTCEEEEECCSH---HHHHHHHHHHHTTCEEEEECS
T ss_pred cCCCCEEEEEeECH---HHHHHHHHHHhCCCEEEEECC
Confidence 48899999999754 999999999999999998877
No 82
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=85.66 E-value=0.68 Score=35.36 Aligned_cols=39 Identities=23% Similarity=0.183 Sum_probs=33.4
Q ss_pred HHhc-CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 33 EEMG-RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 33 e~~g-~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
++++ .+.|+||+++|=+ ++.++++..+..||++|....|
T Consensus 108 r~~~~~l~g~tvGIIGlG---~IG~~vA~~l~~~G~~V~~~d~ 147 (380)
T 2o4c_A 108 EVRGADLAERTYGVVGAG---QVGGRLVEVLRGLGWKVLVCDP 147 (380)
T ss_dssp HHHTCCGGGCEEEEECCS---HHHHHHHHHHHHTTCEEEEECH
T ss_pred hhhhcccCCCEEEEEeCC---HHHHHHHHHHHHCCCEEEEEcC
Confidence 3445 6999999999954 4999999999999999998876
No 83
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=85.56 E-value=1.2 Score=33.03 Aligned_cols=36 Identities=28% Similarity=0.336 Sum_probs=31.9
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPP 75 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~ 75 (99)
.+.|++|+++|=+ ++.++++..+..+|++|....|.
T Consensus 143 ~l~g~~vgIIG~G---~iG~~vA~~l~~~G~~V~~~d~~ 178 (333)
T 2d0i_A 143 SLYGKKVGILGMG---AIGKAIARRLIPFGVKLYYWSRH 178 (333)
T ss_dssp CSTTCEEEEECCS---HHHHHHHHHHGGGTCEEEEECSS
T ss_pred CCCcCEEEEEccC---HHHHHHHHHHHHCCCEEEEECCC
Confidence 5899999999975 49999999999999999988774
No 84
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=85.40 E-value=0.96 Score=33.96 Aligned_cols=36 Identities=14% Similarity=0.200 Sum_probs=31.9
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPP 75 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~ 75 (99)
.+.|+||+++|=+. +.++++..+..||++|....|.
T Consensus 145 ~l~gktvgIiGlG~---IG~~vA~~l~~~G~~V~~~d~~ 180 (343)
T 2yq5_A 145 EIYNLTVGLIGVGH---IGSAVAEIFSAMGAKVIAYDVA 180 (343)
T ss_dssp CGGGSEEEEECCSH---HHHHHHHHHHHTTCEEEEECSS
T ss_pred ccCCCeEEEEecCH---HHHHHHHHHhhCCCEEEEECCC
Confidence 37899999999754 9999999999999999998874
No 85
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=85.32 E-value=3.5 Score=28.63 Aligned_cols=54 Identities=11% Similarity=0.034 Sum_probs=40.7
Q ss_pred CCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCC-CCCCHHHHHHHHh-cCCeE
Q psy4411 38 VNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPN-LGMPESIQEFVAS-KGKQQ 94 (99)
Q Consensus 38 l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~-~~~~~~~~~~a~~-~g~~~ 94 (99)
..+++|+++|.+. ++-.++..++++|.+++++.+.. +..++++.+.+.+ .|+++
T Consensus 141 ~~~~~v~VvG~G~---~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~l~~~~gv~v 196 (311)
T 2q0l_A 141 YKNKEVAVLGGGD---TAVEEAIYLANICKKVYLIHRRDGFRCAPITLEHAKNNDKIEF 196 (311)
T ss_dssp GTTSEEEEECCSH---HHHHHHHHHHTTSSEEEEECSSSSCCSCHHHHHHHHTCTTEEE
T ss_pred cCCCEEEEECCCH---HHHHHHHHHHhcCCEEEEEeeCCccCCCHHHHHHHhhCCCeEE
Confidence 3578999999764 77888888899999999998854 4456677777764 56544
No 86
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=85.31 E-value=1.1 Score=33.24 Aligned_cols=36 Identities=14% Similarity=0.172 Sum_probs=31.8
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPP 75 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~ 75 (99)
.+.|+||+++|=+ ++.++++..+..||++|....|.
T Consensus 142 ~l~g~~vgIiG~G---~IG~~~A~~l~~~G~~V~~~d~~ 177 (333)
T 1dxy_A 142 ELGQQTVGVMGTG---HIGQVAIKLFKGFGAKVIAYDPY 177 (333)
T ss_dssp CGGGSEEEEECCS---HHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCCCCEEEEECcC---HHHHHHHHHHHHCCCEEEEECCC
Confidence 4889999999974 49999999999999999998874
No 87
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=85.27 E-value=1.2 Score=33.04 Aligned_cols=36 Identities=17% Similarity=0.167 Sum_probs=31.8
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPP 75 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~ 75 (99)
.+.|+||+++|=++ +.++++..+..||++|....|.
T Consensus 134 ~l~gktvGIiGlG~---IG~~vA~~l~~~G~~V~~~dr~ 169 (324)
T 3evt_A 134 TLTGQQLLIYGTGQ---IGQSLAAKASALGMHVIGVNTT 169 (324)
T ss_dssp CSTTCEEEEECCSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred cccCCeEEEECcCH---HHHHHHHHHHhCCCEEEEECCC
Confidence 58899999999864 9999999999999999988763
No 88
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=85.22 E-value=1.3 Score=33.17 Aligned_cols=36 Identities=17% Similarity=0.307 Sum_probs=31.9
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPP 75 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~ 75 (99)
++.|+||+++|=++ +.++++..+..||++|....|.
T Consensus 165 ~l~g~tvGIIG~G~---IG~~vA~~l~~~G~~V~~~d~~ 200 (347)
T 1mx3_A 165 RIRGETLGIIGLGR---VGQAVALRAKAFGFNVLFYDPY 200 (347)
T ss_dssp CCTTCEEEEECCSH---HHHHHHHHHHTTTCEEEEECTT
T ss_pred CCCCCEEEEEeECH---HHHHHHHHHHHCCCEEEEECCC
Confidence 58999999999754 9999999999999999988874
No 89
>3vc3_A Beta-cyanoalnine synthase; beta-cyanoalanine synthase, transferase; HET: C6P; 1.77A {Glycine max} PDB: 3vbe_A*
Probab=85.18 E-value=1.7 Score=32.23 Aligned_cols=52 Identities=12% Similarity=-0.008 Sum_probs=40.0
Q ss_pred cEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCeEEEE
Q psy4411 41 LTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQQEVY 97 (99)
Q Consensus 41 ~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~~~~ 97 (99)
.+|+-...+ |...+++.+|+++|++.+++-|+. .++.-++.++..|+++.+.
T Consensus 88 ~~Vv~aSsG---N~g~alA~~aa~~G~~~~IvmP~~--~~~~k~~~~~~~GA~Vv~v 139 (344)
T 3vc3_A 88 TTLIEPTSG---NMGISMAFMAAMKGYKMVLTMPSY--TSLERRVTMRAFGAELILT 139 (344)
T ss_dssp CEEEEECSS---HHHHHHHHHHHHHTCEEEEEEETT--SCHHHHHHHHHTTCEEEEE
T ss_pred CEEEEeCCc---HHHHHHHHHHHHcCCcEEEEECCC--ChHHHHHHHHHcCCEEEEE
Confidence 345544443 489999999999999999999986 4555567788889988765
No 90
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=85.13 E-value=1.5 Score=32.43 Aligned_cols=36 Identities=25% Similarity=0.355 Sum_probs=31.7
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPP 75 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~ 75 (99)
.+.|++|+++|-+ ++.++++..+..+|++|....|.
T Consensus 147 ~l~g~~vgIIG~G---~iG~~iA~~l~~~G~~V~~~d~~ 182 (334)
T 2dbq_A 147 DVYGKTIGIIGLG---RIGQAIAKRAKGFNMRILYYSRT 182 (334)
T ss_dssp CCTTCEEEEECCS---HHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCCCCEEEEEccC---HHHHHHHHHHHhCCCEEEEECCC
Confidence 4889999999964 49999999999999999988874
No 91
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=85.09 E-value=1.3 Score=33.10 Aligned_cols=36 Identities=22% Similarity=0.257 Sum_probs=31.9
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPP 75 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~ 75 (99)
.+.|+||+++|=+ ++.++++..+..||++|....|.
T Consensus 162 ~l~g~tvgIIGlG---~IG~~vA~~l~~~G~~V~~~d~~ 197 (335)
T 2g76_A 162 ELNGKTLGILGLG---RIGREVATRMQSFGMKTIGYDPI 197 (335)
T ss_dssp CCTTCEEEEECCS---HHHHHHHHHHHTTTCEEEEECSS
T ss_pred CCCcCEEEEEeEC---HHHHHHHHHHHHCCCEEEEECCC
Confidence 5899999999974 49999999999999999988873
No 92
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=85.07 E-value=1.3 Score=33.28 Aligned_cols=36 Identities=17% Similarity=0.215 Sum_probs=31.9
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPP 75 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~ 75 (99)
.+.|+||+++|=++ +.++++..+..||++|....|.
T Consensus 168 ~l~gktiGIIGlG~---IG~~vA~~l~~~G~~V~~~dr~ 203 (340)
T 4dgs_A 168 SPKGKRIGVLGLGQ---IGRALASRAEAFGMSVRYWNRS 203 (340)
T ss_dssp CCTTCEEEEECCSH---HHHHHHHHHHTTTCEEEEECSS
T ss_pred cccCCEEEEECCCH---HHHHHHHHHHHCCCEEEEEcCC
Confidence 58899999999854 9999999999999999988763
No 93
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=85.00 E-value=1.3 Score=33.30 Aligned_cols=36 Identities=14% Similarity=0.233 Sum_probs=32.1
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPP 75 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~ 75 (99)
.+.|+||+++|=+ ++.++++..+..||++|....|.
T Consensus 170 ~l~gktvGIIGlG---~IG~~vA~~l~~~G~~V~~~dr~ 205 (345)
T 4g2n_A 170 GLTGRRLGIFGMG---RIGRAIATRARGFGLAIHYHNRT 205 (345)
T ss_dssp CCTTCEEEEESCS---HHHHHHHHHHHTTTCEEEEECSS
T ss_pred ccCCCEEEEEEeC---hhHHHHHHHHHHCCCEEEEECCC
Confidence 4889999999975 49999999999999999998874
No 94
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=84.90 E-value=1.2 Score=31.95 Aligned_cols=36 Identities=19% Similarity=0.253 Sum_probs=31.8
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPP 75 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~ 75 (99)
.+.|++++++|-+ ++.+..+..+..+|+++.++.|.
T Consensus 152 ~l~g~~v~IiG~G---~iG~~~a~~l~~~G~~V~~~dr~ 187 (293)
T 3d4o_A 152 TIHGANVAVLGLG---RVGMSVARKFAALGAKVKVGARE 187 (293)
T ss_dssp CSTTCEEEEECCS---HHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCCEEEEEeeC---HHHHHHHHHHHhCCCEEEEEECC
Confidence 6899999999964 49999999999999999888773
No 95
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=84.77 E-value=3.9 Score=31.29 Aligned_cols=55 Identities=13% Similarity=0.140 Sum_probs=40.7
Q ss_pred CCCcEEEEECCCCCchhHHHHHHHHhhCCC-EEEEECCCCCC-CC--HHHHHHHHhcCCeEE
Q psy4411 38 VNGLTITMVGDLKNGRTVHSLARLLTLYDV-KLNYVSPPNLG-MP--ESIQEFVASKGKQQE 95 (99)
Q Consensus 38 l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~-~v~~~~P~~~~-~~--~~~~~~a~~~g~~~~ 95 (99)
..|++|+++|.++ ++-..+..+.++|. +|+++...... ++ +.-++.+++.|+++.
T Consensus 262 ~~gk~VvVIGgG~---~a~d~A~~~~r~Ga~~Vtiv~r~~~~~~p~~~~e~~~~~~~Gv~~~ 320 (456)
T 2vdc_G 262 AAGKHVVVLGGGD---TAMDCVRTAIRQGATSVKCLYRRDRKNMPGSQREVAHAEEEGVEFI 320 (456)
T ss_dssp CCCSEEEEECSSH---HHHHHHHHHHHTTCSEEEEECSSCSTTCSSCHHHHHHHHHTTCEEE
T ss_pred cCCCEEEEECCCh---hHHHHHHHHHHcCCCEEEEEEeCCccCCCCCHHHHHHHHHCCCEEE
Confidence 5689999999864 88888888889997 69999875432 32 333566788887764
No 96
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=84.61 E-value=1.1 Score=33.35 Aligned_cols=36 Identities=17% Similarity=0.170 Sum_probs=31.9
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPP 75 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~ 75 (99)
.+.|+||+++|=+. +.++++..+..||++|....|.
T Consensus 138 ~l~g~tvgIiG~G~---IG~~vA~~l~~~G~~V~~~d~~ 173 (334)
T 2pi1_A 138 ELNRLTLGVIGTGR---IGSRVAMYGLAFGMKVLCYDVV 173 (334)
T ss_dssp CGGGSEEEEECCSH---HHHHHHHHHHHTTCEEEEECSS
T ss_pred eccCceEEEECcCH---HHHHHHHHHHHCcCEEEEECCC
Confidence 48899999999754 9999999999999999988874
No 97
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=84.58 E-value=3.4 Score=29.07 Aligned_cols=54 Identities=11% Similarity=0.118 Sum_probs=40.4
Q ss_pred CCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCC-CCCCHHHHHHHHh-cCCeE
Q psy4411 38 VNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPN-LGMPESIQEFVAS-KGKQQ 94 (99)
Q Consensus 38 l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~-~~~~~~~~~~a~~-~g~~~ 94 (99)
..+++++++|.+. ++-.++..++.+|.+++++.+.. +.+++.+.+.+.+ .|+++
T Consensus 150 ~~~~~v~VvG~G~---~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~l~~~~gv~i 205 (325)
T 2q7v_A 150 YKGKKVVVIGGGD---AAVEEGMFLTKFADEVTVIHRRDTLRANKVAQARAFANPKMKF 205 (325)
T ss_dssp GTTCEEEEECCSH---HHHHHHHHHTTTCSEEEEECSSSSCCSCHHHHHHHHTCTTEEE
T ss_pred cCCCEEEEECCCH---HHHHHHHHHHhcCCEEEEEeCCCcCCcchHHHHHHHhcCCceE
Confidence 4578999999864 77788888889999999999754 4456667676654 46554
No 98
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=84.56 E-value=3.3 Score=28.77 Aligned_cols=54 Identities=13% Similarity=0.095 Sum_probs=39.8
Q ss_pred CCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCC-CCCCCHHHHHHHHh-cCCeE
Q psy4411 38 VNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPP-NLGMPESIQEFVAS-KGKQQ 94 (99)
Q Consensus 38 l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~-~~~~~~~~~~~a~~-~g~~~ 94 (99)
..+++|+++|.+. ++-.++..++.+|.+++++.+. .+..++.+.+.+++ .|+++
T Consensus 142 ~~~~~v~VvG~G~---~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~l~~~~gv~v 197 (310)
T 1fl2_A 142 FKGKRVAVIGGGN---SGVEAAIDLAGIVEHVTLLEFAPEMKADQVLQDKLRSLKNVDI 197 (310)
T ss_dssp GBTCEEEEECCSH---HHHHHHHHHHTTBSEEEEECSSSSCCSCHHHHHHHHTCTTEEE
T ss_pred cCCCEEEEECCCH---HHHHHHHHHHHhCCEEEEEEeCcccCccHHHHHHHhhCCCeEE
Confidence 4578999999864 7777888888899999999874 33445666666776 46554
No 99
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=84.47 E-value=1.4 Score=33.68 Aligned_cols=36 Identities=11% Similarity=0.121 Sum_probs=32.3
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPP 75 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~ 75 (99)
.+.|+|++++|=++ +.++++..+..|||+|...-|.
T Consensus 142 el~gktlGiIGlG~---IG~~vA~~l~~~G~~V~~~d~~ 177 (404)
T 1sc6_A 142 EARGKKLGIIGYGH---IGTQLGILAESLGMYVYFYDIE 177 (404)
T ss_dssp CSTTCEEEEECCSH---HHHHHHHHHHHTTCEEEEECSS
T ss_pred ccCCCEEEEEeECH---HHHHHHHHHHHCCCEEEEEcCC
Confidence 48999999999854 9999999999999999998874
No 100
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=84.38 E-value=3.1 Score=32.42 Aligned_cols=60 Identities=25% Similarity=0.205 Sum_probs=43.5
Q ss_pred HHhcCCC-CcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCeEEEE
Q psy4411 33 EEMGRVN-GLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQQEVY 97 (99)
Q Consensus 33 e~~g~l~-g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~~~~ 97 (99)
++.|.++ |.+|+-. ..||.+.+++.+|+++|++++++-|+. .++.-++.++..|+.+..+
T Consensus 105 ~~~g~~~~g~~vv~~---ssGN~g~a~A~~a~~~G~~~~iv~p~~--~~~~k~~~~~~~GA~v~~~ 165 (527)
T 3pc3_A 105 EEQGLLKPGYTIIEP---TSGNTGIGLAMACAVKGYKCIIVMPEK--MSNEKVSALRTLGAKIIRT 165 (527)
T ss_dssp HHHTCCCTTCEEEEE---CSSHHHHHHHHHHHHHTCEEEEEEETT--SCHHHHHHHHHTTCEEEEE
T ss_pred HHcCCCCCCCEEEEe---CCCHHHHHHHHHHHHhCCeEEEEEcCC--CCHHHHHHHHHCCCEEEEe
Confidence 3345443 3455432 344599999999999999999999985 5566667788889888665
No 101
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=84.32 E-value=1.6 Score=32.47 Aligned_cols=36 Identities=22% Similarity=0.176 Sum_probs=31.7
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHh-hCCCEEEEECCC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLT-LYDVKLNYVSPP 75 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~-~~G~~v~~~~P~ 75 (99)
.+.|++|+++|=+ ++.++++..+. .+|++|....|.
T Consensus 160 ~l~g~~vgIIG~G---~IG~~vA~~l~~~~G~~V~~~d~~ 196 (348)
T 2w2k_A 160 NPRGHVLGAVGLG---AIQKEIARKAVHGLGMKLVYYDVA 196 (348)
T ss_dssp CSTTCEEEEECCS---HHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCCCCEEEEEEEC---HHHHHHHHHHHHhcCCEEEEECCC
Confidence 4889999999974 49999999999 999999988774
No 102
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=84.30 E-value=4.2 Score=30.16 Aligned_cols=55 Identities=16% Similarity=0.152 Sum_probs=40.6
Q ss_pred CCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCC----CCHHH----HHHHHhcCCeEEE
Q psy4411 39 NGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLG----MPESI----QEFVASKGKQQEV 96 (99)
Q Consensus 39 ~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~----~~~~~----~~~a~~~g~~~~~ 96 (99)
.+++++++|.+. +.-.++..++++|.+|+++.+.... +++++ .+.+++.|+++..
T Consensus 144 ~~~~vvViGgG~---~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~ 206 (408)
T 2gqw_A 144 PQSRLLIVGGGV---IGLELAATARTAGVHVSLVETQPRLMSRAAPATLADFVARYHAAQGVDLRF 206 (408)
T ss_dssp TTCEEEEECCSH---HHHHHHHHHHHTTCEEEEEESSSSSSTTTSCHHHHHHHHHHHHHTTCEEEE
T ss_pred cCCeEEEECCCH---HHHHHHHHHHhCCCEEEEEEeCCcccccccCHHHHHHHHHHHHHcCcEEEe
Confidence 478999999864 7888888899999999999875432 34544 3446677877654
No 103
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=84.25 E-value=3.7 Score=31.26 Aligned_cols=55 Identities=11% Similarity=0.032 Sum_probs=40.2
Q ss_pred CCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCC----CCCHHHH----HHHHhcCCeEE
Q psy4411 38 VNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNL----GMPESIQ----EFVASKGKQQE 95 (99)
Q Consensus 38 l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~----~~~~~~~----~~a~~~g~~~~ 95 (99)
..+++++++|.+. +.-.++..++.+|.+|+++.+... .+++++. +.+++.|+++.
T Consensus 192 ~~~~~vvVIGgG~---ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~ 254 (490)
T 2bc0_A 192 KDIKRVAVVGAGY---IGVELAEAFQRKGKEVVLIDVVDTCLAGYYDRDLTDLMAKNMEEHGIQLA 254 (490)
T ss_dssp TTCCEEEEECCSH---HHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHTTTCEEE
T ss_pred cCCceEEEECCCH---HHHHHHHHHHHCCCeEEEEEcccchhhhHHHHHHHHHHHHHHHhCCeEEE
Confidence 4578999999864 888888889999999999986433 2345543 44567787664
No 104
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=84.11 E-value=0.83 Score=31.46 Aligned_cols=82 Identities=12% Similarity=0.098 Sum_probs=52.8
Q ss_pred HHHHhhccCEEEEccCCchhH---------------------HHHhcCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEE
Q psy4411 11 VAVLSGYADVIVLRHPEPGAV---------------------KEEMGRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKL 69 (99)
Q Consensus 11 a~vls~y~D~iv~R~~~~~~~---------------------~e~~g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v 69 (99)
|+-+..=+|+|+.|...-..+ ....... +.+|+++|-.+ +...+-.++..||+++
T Consensus 45 a~~~~~~~dVIISRGgta~~lr~~~~iPVV~I~~s~~Dil~al~~a~~~-~~kIavvg~~~---~~~~~~~~~~ll~~~i 120 (196)
T 2q5c_A 45 AFGLQDEVDAIISRGATSDYIKKSVSIPSISIKVTRFDTMRAVYNAKRF-GNELALIAYKH---SIVDKHEIEAMLGVKI 120 (196)
T ss_dssp HHHHTTTCSEEEEEHHHHHHHHTTCSSCEEEECCCHHHHHHHHHHHGGG-CSEEEEEEESS---CSSCHHHHHHHHTCEE
T ss_pred HHHhcCCCeEEEECChHHHHHHHhCCCCEEEEcCCHhHHHHHHHHHHhh-CCcEEEEeCcc---hhhHHHHHHHHhCCce
Confidence 333433478998887654444 1122222 34999999744 5666777888899998
Q ss_pred EEECCCCCCCCHHHHHHHHhcCCeEEE
Q psy4411 70 NYVSPPNLGMPESIQEFVASKGKQQEV 96 (99)
Q Consensus 70 ~~~~P~~~~~~~~~~~~a~~~g~~~~~ 96 (99)
........+=-+..++++++.|.+.-+
T Consensus 121 ~~~~~~~~~e~~~~i~~l~~~G~~vvV 147 (196)
T 2q5c_A 121 KEFLFSSEDEITTLISKVKTENIKIVV 147 (196)
T ss_dssp EEEEECSGGGHHHHHHHHHHTTCCEEE
T ss_pred EEEEeCCHHHHHHHHHHHHHCCCeEEE
Confidence 888775543334567778888876643
No 105
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=84.08 E-value=1.2 Score=32.93 Aligned_cols=36 Identities=17% Similarity=0.021 Sum_probs=31.4
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPP 75 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~ 75 (99)
.+.|++|+++|=+ ++.++++..+..||++|....|.
T Consensus 143 ~l~g~~vgIiG~G---~IG~~~A~~l~~~G~~V~~~d~~ 178 (331)
T 1xdw_A 143 EVRNCTVGVVGLG---RIGRVAAQIFHGMGATVIGEDVF 178 (331)
T ss_dssp CGGGSEEEEECCS---HHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCCCCEEEEECcC---HHHHHHHHHHHHCCCEEEEECCC
Confidence 3788999999974 49999999999999999988763
No 106
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=83.94 E-value=3.5 Score=28.49 Aligned_cols=54 Identities=15% Similarity=0.193 Sum_probs=40.3
Q ss_pred CCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCC-CCCCHHHHHHHHhc-CCeE
Q psy4411 38 VNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPN-LGMPESIQEFVASK-GKQQ 94 (99)
Q Consensus 38 l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~-~~~~~~~~~~a~~~-g~~~ 94 (99)
..+++++++|.+. +.-.++..+..+|.+++++.+.. +..++++.+.+.+. |+++
T Consensus 152 ~~~~~v~vvG~G~---~~~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~gv~~ 207 (323)
T 3f8d_A 152 FKNRVVAVIGGGD---SALEGAEILSSYSTKVYLIHRRDTFKAQPIYVETVKKKPNVEF 207 (323)
T ss_dssp GTTCEEEEECCSH---HHHHHHHHHHHHSSEEEEECSSSSCCSCHHHHHHHHTCTTEEE
T ss_pred cCCCEEEEECCCH---HHHHHHHHHHHhCCeEEEEEeCCCCCcCHHHHHHHHhCCCcEE
Confidence 5678999999754 77778888888999999999854 34456676766654 6554
No 107
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=83.84 E-value=1.5 Score=32.88 Aligned_cols=36 Identities=25% Similarity=0.264 Sum_probs=31.9
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPP 75 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~ 75 (99)
.+.|+||+++|=++ +.++++..+..||++|....|.
T Consensus 161 ~l~gktvGIIG~G~---IG~~vA~~l~~~G~~V~~~dr~ 196 (351)
T 3jtm_A 161 DLEGKTIGTVGAGR---IGKLLLQRLKPFGCNLLYHDRL 196 (351)
T ss_dssp CSTTCEEEEECCSH---HHHHHHHHHGGGCCEEEEECSS
T ss_pred cccCCEEeEEEeCH---HHHHHHHHHHHCCCEEEEeCCC
Confidence 48999999999754 9999999999999999888764
No 108
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=83.80 E-value=1.3 Score=32.85 Aligned_cols=36 Identities=11% Similarity=0.106 Sum_probs=31.6
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPP 75 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~ 75 (99)
.+.|++|+++|=++ +.++++..+..||++|....|.
T Consensus 143 ~l~g~~vgIiG~G~---IG~~~A~~l~~~G~~V~~~d~~ 178 (333)
T 1j4a_A 143 EVRDQVVGVVGTGH---IGQVFMQIMEGFGAKVITYDIF 178 (333)
T ss_dssp CGGGSEEEEECCSH---HHHHHHHHHHHTTCEEEEECSS
T ss_pred cCCCCEEEEEccCH---HHHHHHHHHHHCCCEEEEECCC
Confidence 47889999999754 9999999999999999988874
No 109
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=83.33 E-value=0.72 Score=32.75 Aligned_cols=75 Identities=15% Similarity=0.183 Sum_probs=51.1
Q ss_pred cCEEEEccCCchhH---------------------HHHhcCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCC
Q psy4411 18 ADVIVLRHPEPGAV---------------------KEEMGRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPN 76 (99)
Q Consensus 18 ~D~iv~R~~~~~~~---------------------~e~~g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~ 76 (99)
+|+|+.|...-..+ ....... +.+|++||-.+ +...+-.++..||+++.......
T Consensus 64 ~dVIISRGgta~~Lr~~~~iPVV~I~vs~~Dil~aL~~a~~~-~~kIavVg~~~---~~~~~~~i~~ll~~~i~~~~~~~ 139 (225)
T 2pju_A 64 CDAIIAAGSNGAYLKSRLSVPVILIKPSGYDVLQFLAKAGKL-TSSIGVVTYQE---TIPALVAFQKTFNLRLDQRSYIT 139 (225)
T ss_dssp CSEEEEEHHHHHHHHTTCSSCEEEECCCHHHHHHHHHHTTCT-TSCEEEEEESS---CCHHHHHHHHHHTCCEEEEEESS
T ss_pred CeEEEeCChHHHHHHhhCCCCEEEecCCHHHHHHHHHHHHhh-CCcEEEEeCch---hhhHHHHHHHHhCCceEEEEeCC
Confidence 78999997755544 1222232 35999999744 67788888899999988877654
Q ss_pred CCCCHHHHHHHHhcCCeEEE
Q psy4411 77 LGMPESIQEFVASKGKQQEV 96 (99)
Q Consensus 77 ~~~~~~~~~~a~~~g~~~~~ 96 (99)
.+=-+..++++++.|.+.-+
T Consensus 140 ~ee~~~~i~~l~~~G~~vVV 159 (225)
T 2pju_A 140 EEDARGQINELKANGTEAVV 159 (225)
T ss_dssp HHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHHHHCCCCEEE
Confidence 43234556777888876643
No 110
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=83.28 E-value=7 Score=30.48 Aligned_cols=61 Identities=15% Similarity=0.192 Sum_probs=47.0
Q ss_pred HHHhc---CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCeE
Q psy4411 32 KEEMG---RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQQ 94 (99)
Q Consensus 32 ~e~~g---~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~ 94 (99)
+|+|+ +|+|.+|+-+=...- -.--|++.+..+|++|+.++..-|...+++.+.+.+.|+.+
T Consensus 32 r~~~~~~~pl~g~ri~~~lh~~~--~Ta~l~~tL~~~GA~v~~~~~n~~stqd~~aaal~~~gi~v 95 (436)
T 3h9u_A 32 RREYGPSKPLKGAKIAGCLHMTM--QTAVLIETLVELGAEVRWASCNIFSTQDHAAAAIAKRGIPV 95 (436)
T ss_dssp HHHHTTTCTTTTCEEEEESCCSH--HHHHHHHHHHHTTCEEEEECSSTTTCCHHHHHHHHHTTCCE
T ss_pred HHHHhccCCCCCCEEEEEeccHH--HHHHHHHHHHHcCCEEEEecCCCCCCcHHHHHHHHhcCCeE
Confidence 55554 599999998766442 33457777888999999999888988888888777778654
No 111
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=83.13 E-value=1.5 Score=32.44 Aligned_cols=36 Identities=14% Similarity=0.135 Sum_probs=31.7
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPP 75 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~ 75 (99)
.+.|+||+++|=++ +.++++..+..||++|....+.
T Consensus 136 ~l~g~tvGIiG~G~---IG~~vA~~l~~~G~~V~~~dr~ 171 (315)
T 3pp8_A 136 TREEFSVGIMGAGV---LGAKVAESLQAWGFPLRCWSRS 171 (315)
T ss_dssp CSTTCCEEEECCSH---HHHHHHHHHHTTTCCEEEEESS
T ss_pred CcCCCEEEEEeeCH---HHHHHHHHHHHCCCEEEEEcCC
Confidence 48899999999864 9999999999999999988653
No 112
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=83.11 E-value=5 Score=27.96 Aligned_cols=55 Identities=13% Similarity=0.128 Sum_probs=41.6
Q ss_pred CCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCC-CCCHHHHHHHHhc-CCeEE
Q psy4411 38 VNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNL-GMPESIQEFVASK-GKQQE 95 (99)
Q Consensus 38 l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~-~~~~~~~~~a~~~-g~~~~ 95 (99)
..+++++++|-+. ++-.++..++.+|.+++++.+... ...+.+.+.+.+. |+++.
T Consensus 171 ~~~~~v~vvG~G~---~g~e~a~~l~~~g~~v~~v~~~~~~~~~~~~~~~l~~~~gv~i~ 227 (338)
T 3itj_A 171 FRNKPLAVIGGGD---SACEEAQFLTKYGSKVFMLVRKDHLRASTIMQKRAEKNEKIEIL 227 (338)
T ss_dssp GTTSEEEEECSSH---HHHHHHHHHTTTSSEEEEECSSSSCCSCHHHHHHHHHCTTEEEE
T ss_pred cCCCEEEEECCCH---HHHHHHHHHHhcCCEEEEEEcCCccCCCHHHHHHHHhcCCeEEe
Confidence 5678999999754 788888888999999999998543 3456667777665 76553
No 113
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=82.88 E-value=1.7 Score=31.28 Aligned_cols=36 Identities=17% Similarity=0.259 Sum_probs=31.8
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPP 75 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~ 75 (99)
.+.|++++++|-+ ++.+..+..+..+|++|++..|.
T Consensus 154 ~l~g~~v~IiG~G---~iG~~~a~~l~~~G~~V~~~d~~ 189 (300)
T 2rir_A 154 TIHGSQVAVLGLG---RTGMTIARTFAALGANVKVGARS 189 (300)
T ss_dssp CSTTSEEEEECCS---HHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCCEEEEEccc---HHHHHHHHHHHHCCCEEEEEECC
Confidence 5899999999964 49999999999999999988773
No 114
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=82.60 E-value=4.3 Score=28.52 Aligned_cols=54 Identities=11% Similarity=0.052 Sum_probs=38.5
Q ss_pred CCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCC-CCCCHHHHHHHH----hcCCeE
Q psy4411 38 VNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPN-LGMPESIQEFVA----SKGKQQ 94 (99)
Q Consensus 38 l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~-~~~~~~~~~~a~----~~g~~~ 94 (99)
+.+++|+++|.+. ++-.++..++..|.+++++.+.. +.+.++..+.++ +.|+++
T Consensus 150 ~~~~~v~viG~G~---~g~e~a~~l~~~g~~V~~v~~~~~~~~~~~~~~~l~~~l~~~gv~v 208 (335)
T 2zbw_A 150 FQGKRVLIVGGGD---SAVDWALNLLDTARRITLIHRRPQFRAHEASVKELMKAHEEGRLEV 208 (335)
T ss_dssp GTTCEEEEECSSH---HHHHHHHHTTTTSSEEEEECSSSSCCSCHHHHHHHHHHHHTTSSEE
T ss_pred cCCCEEEEECCCH---HHHHHHHHHHhhCCEEEEEEcCCccCccHHHHHHHHhccccCCeEE
Confidence 4678999999864 77788888888999999998854 434455444443 446654
No 115
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=82.32 E-value=3.6 Score=30.59 Aligned_cols=37 Identities=16% Similarity=0.150 Sum_probs=33.2
Q ss_pred cCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 36 GRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 36 g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
.+++|++++.+|-++. +.+.++..+...|++|+++.-
T Consensus 161 i~l~Gk~vvVIG~s~i--VG~p~A~lL~~~gAtVtv~~~ 197 (300)
T 4a26_A 161 IEMAGKRAVVLGRSNI--VGAPVAALLMKENATVTIVHS 197 (300)
T ss_dssp CCCTTCEEEEECCCTT--THHHHHHHHHHTTCEEEEECT
T ss_pred CCCCCCEEEEECCCch--HHHHHHHHHHHCCCeEEEEeC
Confidence 4799999999998776 899999999999999999874
No 116
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=82.25 E-value=8 Score=30.47 Aligned_cols=61 Identities=16% Similarity=0.243 Sum_probs=47.0
Q ss_pred HHHhc---CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCeE
Q psy4411 32 KEEMG---RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQQ 94 (99)
Q Consensus 32 ~e~~g---~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~ 94 (99)
+|+|+ +|+|.+|+-+=...- -.--|++.+..+|++|+.++..-|...+++.+.+.+.|+.+
T Consensus 34 r~~~~~~kPl~G~rI~~~lH~t~--~TavlietL~a~GAev~~~~cN~~STqd~~aaal~~~gi~v 97 (464)
T 3n58_A 34 REEFGKSQPLKGARISGSLHMTI--QTAVLIETLKVLGAEVRWASCNIFSTQDHAAAAIAATGTPV 97 (464)
T ss_dssp HHHHTTTCTTTTCEEEEESCCSH--HHHHHHHHHHHTTCEEEEECSSTTCCCHHHHHHHHHTTCCE
T ss_pred HHHHhccCCCCCCEEEEEEecHH--HHHHHHHHHHHcCCeEEEecCCCCCCcHHHHHHHHhcCCeE
Confidence 56664 599999998766442 33467778888999999999988988888887777777654
No 117
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=82.25 E-value=6.5 Score=27.22 Aligned_cols=45 Identities=20% Similarity=0.230 Sum_probs=34.4
Q ss_pred CCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCC-CCCCHHHHH
Q psy4411 38 VNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPN-LGMPESIQE 85 (99)
Q Consensus 38 l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~-~~~~~~~~~ 85 (99)
.++++++++|.+. ++--++..++++|.+|+++.... ..++++...
T Consensus 150 ~~~~~vvViGgG~---ig~e~A~~l~~~G~~Vt~v~~~~~~~~~~~~~~ 195 (314)
T 4a5l_A 150 FRNKVLMVVGGGD---AAMEEALHLTKYGSKVIILHRRDAFRASKTMQE 195 (314)
T ss_dssp GTTSEEEEECSSH---HHHHHHHHHTTTSSEEEEECSSSSCCSCHHHHH
T ss_pred cCCCeEEEECCCh---HHHHHHHHHHHhCCeeeeecccccccccchhhh
Confidence 5678999999865 88899999999999999998533 334444433
No 118
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=82.24 E-value=1.7 Score=34.27 Aligned_cols=36 Identities=8% Similarity=0.046 Sum_probs=32.1
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPP 75 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~ 75 (99)
.+.|++++++|=+ ++.++.+..+..||++|++..|.
T Consensus 254 ~l~GktVgIIG~G---~IG~~vA~~l~~~G~~Viv~d~~ 289 (479)
T 1v8b_A 254 LISGKIVVICGYG---DVGKGCASSMKGLGARVYITEID 289 (479)
T ss_dssp CCTTSEEEEECCS---HHHHHHHHHHHHHTCEEEEECSC
T ss_pred ccCCCEEEEEeeC---HHHHHHHHHHHhCcCEEEEEeCC
Confidence 6999999999953 59999999999999999998874
No 119
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=82.16 E-value=1.6 Score=32.49 Aligned_cols=36 Identities=17% Similarity=0.318 Sum_probs=31.7
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPP 75 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~ 75 (99)
.+.|++|+++|=++ +.+.++..+..+|++|.+..|.
T Consensus 161 ~l~g~~vgIIG~G~---iG~~vA~~l~~~G~~V~~~dr~ 196 (333)
T 3ba1_A 161 KFSGKRVGIIGLGR---IGLAVAERAEAFDCPISYFSRS 196 (333)
T ss_dssp CCTTCCEEEECCSH---HHHHHHHHHHTTTCCEEEECSS
T ss_pred ccCCCEEEEECCCH---HHHHHHHHHHHCCCEEEEECCC
Confidence 58899999999754 9999999999999999988764
No 120
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=82.15 E-value=2 Score=33.21 Aligned_cols=36 Identities=19% Similarity=0.278 Sum_probs=32.0
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPP 75 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~ 75 (99)
.+.|+|++++|=++ +.++++..+..|||+|....|.
T Consensus 153 el~gktvGIIGlG~---IG~~vA~~l~~~G~~V~~yd~~ 188 (416)
T 3k5p_A 153 EVRGKTLGIVGYGN---IGSQVGNLAESLGMTVRYYDTS 188 (416)
T ss_dssp CSTTCEEEEECCSH---HHHHHHHHHHHTTCEEEEECTT
T ss_pred cCCCCEEEEEeeCH---HHHHHHHHHHHCCCEEEEECCc
Confidence 48899999999754 9999999999999999998874
No 121
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=81.74 E-value=2.1 Score=29.80 Aligned_cols=59 Identities=17% Similarity=0.235 Sum_probs=40.5
Q ss_pred cCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCeEEE
Q psy4411 36 GRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQQEV 96 (99)
Q Consensus 36 g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~~~ 96 (99)
-+++|+++.+.|-..- +.+.++..++..|.+|++++-..-+..+.+.+.+++.|.++..
T Consensus 25 m~l~~k~vlITGas~g--IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~ 83 (271)
T 4iin_A 25 MQFTGKNVLITGASKG--IGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAV 83 (271)
T ss_dssp CCCSCCEEEETTCSSH--HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEE
T ss_pred cccCCCEEEEECCCcH--HHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEE
Confidence 4588999999997654 9999999999999999888753222222333444455555443
No 122
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=81.71 E-value=1.6 Score=32.19 Aligned_cols=36 Identities=19% Similarity=0.204 Sum_probs=31.3
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPP 75 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~ 75 (99)
.+.|+||+++|=+ ++.+.++..+..+|++|....|.
T Consensus 152 ~l~g~~vgIIG~G---~iG~~iA~~l~~~G~~V~~~d~~ 187 (330)
T 2gcg_A 152 GLTQSTVGIIGLG---RIGQAIARRLKPFGVQRFLYTGR 187 (330)
T ss_dssp CCTTCEEEEECCS---HHHHHHHHHHGGGTCCEEEEESS
T ss_pred CCCCCEEEEECcC---HHHHHHHHHHHHCCCEEEEECCC
Confidence 4789999999974 39999999999999999888763
No 123
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=81.66 E-value=2.2 Score=31.36 Aligned_cols=49 Identities=14% Similarity=0.124 Sum_probs=36.0
Q ss_pred CCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCe
Q psy4411 38 VNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQ 93 (99)
Q Consensus 38 l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~ 93 (99)
+++.+|+++|-++ +..+++..+...|.++++..+.. +...+.+++.|..
T Consensus 14 l~~~~I~IIG~G~---mG~alA~~L~~~G~~V~~~~~~~----~~~~~~a~~~G~~ 62 (338)
T 1np3_A 14 IQGKKVAIIGYGS---QGHAHACNLKDSGVDVTVGLRSG----SATVAKAEAHGLK 62 (338)
T ss_dssp HHTSCEEEECCSH---HHHHHHHHHHHTTCCEEEECCTT----CHHHHHHHHTTCE
T ss_pred hcCCEEEEECchH---HHHHHHHHHHHCcCEEEEEECCh----HHHHHHHHHCCCE
Confidence 6678999999754 99999999999999988877642 2223445555543
No 124
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=81.56 E-value=2 Score=32.80 Aligned_cols=36 Identities=19% Similarity=0.323 Sum_probs=31.9
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPP 75 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~ 75 (99)
.+.|+||+++|=++ +.++++..+..||++|....|.
T Consensus 188 ~l~gktvGIIGlG~---IG~~vA~~l~a~G~~V~~~d~~ 223 (393)
T 2nac_A 188 DLEAMHVGTVAAGR---IGLAVLRRLAPFDVHLHYTDRH 223 (393)
T ss_dssp CCTTCEEEEECCSH---HHHHHHHHHGGGTCEEEEECSS
T ss_pred cCCCCEEEEEeECH---HHHHHHHHHHhCCCEEEEEcCC
Confidence 48999999999854 9999999999999999988764
No 125
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=81.49 E-value=6.9 Score=29.21 Aligned_cols=54 Identities=7% Similarity=-0.010 Sum_probs=39.3
Q ss_pred CCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCC----CCCHHHH----HHHHhcCCeEE
Q psy4411 39 NGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNL----GMPESIQ----EFVASKGKQQE 95 (99)
Q Consensus 39 ~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~----~~~~~~~----~~a~~~g~~~~ 95 (99)
.+.+++++|.+. +.-.++..++++|.+++++.+... .+++++. +.+++.|+++.
T Consensus 148 ~~~~vvIiG~G~---~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~gv~i~ 209 (447)
T 1nhp_A 148 EVNNVVVIGSGY---IGIEAAEAFAKAGKKVTVIDILDRPLGVYLDKEFTDVLTEEMEANNITIA 209 (447)
T ss_dssp TCCEEEEECCSH---HHHHHHHHHHHTTCEEEEEESSSSTTTTTCCHHHHHHHHHHHHTTTEEEE
T ss_pred CCCeEEEECCCH---HHHHHHHHHHHCCCeEEEEecCcccccccCCHHHHHHHHHHHHhCCCEEE
Confidence 678999999865 788888999999999999976432 2345543 34556776654
No 126
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=81.30 E-value=3.8 Score=30.24 Aligned_cols=38 Identities=13% Similarity=0.085 Sum_probs=33.4
Q ss_pred cCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCC
Q psy4411 36 GRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPP 75 (99)
Q Consensus 36 g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~ 75 (99)
.+++|++++.+|-++. +.+.++.++...|++|+++.-.
T Consensus 157 i~l~Gk~vvVIG~s~i--VG~p~A~lL~~~gAtVtv~hs~ 194 (285)
T 3l07_A 157 IKTEGAYAVVVGASNV--VGKPVSQLLLNAKATVTTCHRF 194 (285)
T ss_dssp CCCTTCEEEEECCCTT--THHHHHHHHHHTTCEEEEECTT
T ss_pred CCCCCCEEEEECCCch--hHHHHHHHHHHCCCeEEEEeCC
Confidence 4699999999998776 8999999999999999998643
No 127
>1tdj_A Biosynthetic threonine deaminase; allostery, cooperative, tetramer, regulation, pyridoxal PHOS isoleucine biosynthesis; HET: PLP; 2.80A {Escherichia coli} SCOP: c.79.1.1 d.58.18.2 d.58.18.2
Probab=81.29 E-value=2.4 Score=33.66 Aligned_cols=42 Identities=17% Similarity=0.077 Sum_probs=34.0
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCeEEE
Q psy4411 53 RTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQQEV 96 (99)
Q Consensus 53 rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~~~ 96 (99)
|.+++++.+|+++|++.+++-|++. ++.-++.++..|+.+..
T Consensus 89 Nhg~avA~aa~~lGi~~~IvmP~~~--p~~Kv~~~r~~GAeVvl 130 (514)
T 1tdj_A 89 NHAQGVAFSSARLGVKALIVMPTAT--ADIKVDAVRGFGGEVLL 130 (514)
T ss_dssp SSHHHHHHHHHHTTCCEEEECCSSC--CHHHHHHHHHHSCEEEC
T ss_pred HHHHHHHHHHHHcCCcEEEEECCCC--CHHHHHHHHHCCCEEEE
Confidence 4899999999999999999999873 44555667777887754
No 128
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=81.28 E-value=4.2 Score=31.76 Aligned_cols=38 Identities=21% Similarity=0.275 Sum_probs=31.5
Q ss_pred HHhc-CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEEC
Q psy4411 33 EEMG-RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVS 73 (99)
Q Consensus 33 e~~g-~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~ 73 (99)
+++| +++|++|++.|.++ |....+..+..+|.+++-++
T Consensus 227 ~~~g~~l~g~~vaVqGfGn---VG~~~a~~L~e~GakvVavs 265 (440)
T 3aog_A 227 EKIGLQVEGARVAIQGFGN---VGNAAARAFHDHGARVVAVQ 265 (440)
T ss_dssp HHHTCCSTTCEEEEECCSH---HHHHHHHHHHHTTCEEEEEE
T ss_pred HhcCCCccCCEEEEeccCH---HHHHHHHHHHHCCCEEEEEE
Confidence 3455 68999999999754 99999999999999998444
No 129
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=81.28 E-value=1.3 Score=33.85 Aligned_cols=35 Identities=20% Similarity=0.205 Sum_probs=31.9
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
.+.|+||+++|=++ +.++++..+..||++|....|
T Consensus 116 ~l~gktvGIIGlG~---IG~~vA~~l~a~G~~V~~~d~ 150 (381)
T 3oet_A 116 SLRDRTIGIVGVGN---VGSRLQTRLEALGIRTLLCDP 150 (381)
T ss_dssp CGGGCEEEEECCSH---HHHHHHHHHHHTTCEEEEECH
T ss_pred ccCCCEEEEEeECH---HHHHHHHHHHHCCCEEEEECC
Confidence 69999999999754 999999999999999999876
No 130
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=81.14 E-value=3.9 Score=30.19 Aligned_cols=38 Identities=11% Similarity=0.098 Sum_probs=33.6
Q ss_pred cCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCC
Q psy4411 36 GRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPP 75 (99)
Q Consensus 36 g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~ 75 (99)
.+++|++++.+|-++. +.+.++.++...|++|+++.-.
T Consensus 156 i~l~Gk~vvVvGrs~i--VG~p~A~lL~~~gAtVtv~h~~ 193 (285)
T 3p2o_A 156 IDLEGKDAVIIGASNI--VGRPMATMLLNAGATVSVCHIK 193 (285)
T ss_dssp CCCTTCEEEEECCCTT--THHHHHHHHHHTTCEEEEECTT
T ss_pred CCCCCCEEEEECCCch--HHHHHHHHHHHCCCeEEEEeCC
Confidence 3699999999998776 8999999999999999999743
No 131
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=80.91 E-value=5.5 Score=28.30 Aligned_cols=36 Identities=11% Similarity=0.079 Sum_probs=28.7
Q ss_pred CCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCC
Q psy4411 38 VNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPN 76 (99)
Q Consensus 38 l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~ 76 (99)
+.+++|+++|-+. ++-.++..++.+|.+|+++.+..
T Consensus 164 ~~~~~vvVvG~G~---~g~e~a~~l~~~g~~V~lv~~~~ 199 (369)
T 3d1c_A 164 FNKGQYVVIGGNE---SGFDAAYQLAKNGSDIALYTSTT 199 (369)
T ss_dssp SCSSEEEEECCSH---HHHHHHHHHHHTTCEEEEECC--
T ss_pred cCCCEEEEECCCc---CHHHHHHHHHhcCCeEEEEecCC
Confidence 5678999999754 77788888889999999998743
No 132
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=80.60 E-value=8.2 Score=26.92 Aligned_cols=53 Identities=19% Similarity=0.209 Sum_probs=37.4
Q ss_pred HHhcCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHH
Q psy4411 33 EEMGRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVA 88 (99)
Q Consensus 33 e~~g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~ 88 (99)
++.+.++|+++.+.|-..++-+.+.++..+++.|.+|.+++-.. .++.++.+.
T Consensus 19 ~~M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~---~~~~~~~l~ 71 (280)
T 3nrc_A 19 SHMGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ---FKDRVEKLC 71 (280)
T ss_dssp ---CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT---CHHHHHHHH
T ss_pred CcccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch---HHHHHHHHH
Confidence 34567899999999965333599999999999999999887644 334444443
No 133
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=80.27 E-value=2.9 Score=31.96 Aligned_cols=34 Identities=9% Similarity=-0.137 Sum_probs=29.5
Q ss_pred CCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 38 VNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 38 l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
+.+.||+++|-+ ++....+..+..+|++|+++-+
T Consensus 182 v~~~kV~ViG~G---~iG~~aa~~a~~lGa~V~v~D~ 215 (381)
T 3p2y_A 182 VKPASALVLGVG---VAGLQALATAKRLGAKTTGYDV 215 (381)
T ss_dssp ECCCEEEEESCS---HHHHHHHHHHHHHTCEEEEECS
T ss_pred cCCCEEEEECch---HHHHHHHHHHHHCCCEEEEEeC
Confidence 578999999985 4999999999999999887655
No 134
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=80.20 E-value=2.3 Score=31.94 Aligned_cols=36 Identities=25% Similarity=0.300 Sum_probs=31.5
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCE-EEEECCC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVK-LNYVSPP 75 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~-v~~~~P~ 75 (99)
.+.|+||+++|=+ ++.++++..+..||++ |....+.
T Consensus 161 ~l~g~tvgIIG~G---~IG~~vA~~l~~~G~~~V~~~d~~ 197 (364)
T 2j6i_A 161 DIEGKTIATIGAG---RIGYRVLERLVPFNPKELLYYDYQ 197 (364)
T ss_dssp CSTTCEEEEECCS---HHHHHHHHHHGGGCCSEEEEECSS
T ss_pred cCCCCEEEEECcC---HHHHHHHHHHHhCCCcEEEEECCC
Confidence 5899999999975 4999999999999997 9888763
No 135
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=80.14 E-value=5.5 Score=27.91 Aligned_cols=54 Identities=13% Similarity=0.194 Sum_probs=39.2
Q ss_pred CCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCC-CCCCHHHHHHH-HhcCCeE
Q psy4411 38 VNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPN-LGMPESIQEFV-ASKGKQQ 94 (99)
Q Consensus 38 l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~-~~~~~~~~~~a-~~~g~~~ 94 (99)
..+++|+++|.+. ++-.++..++.+|.+++++.+.. +.+.+.+.+++ ++.|+++
T Consensus 157 ~~~~~v~VvG~G~---~g~e~A~~l~~~g~~V~lv~~~~~~~~~~~~~~~~~~~~gv~i 212 (333)
T 1vdc_A 157 FRNKPLAVIGGGD---SAMEEANFLTKYGSKVYIIHRRDAFRASKIMQQRALSNPKIDV 212 (333)
T ss_dssp GTTSEEEEECCSH---HHHHHHHHHTTTSSEEEEECSSSSCCSCHHHHHHHHTCTTEEE
T ss_pred cCCCeEEEECCCh---HHHHHHHHHHhcCCeEEEEecCCcCCccHHHHHHHHhCCCeeE
Confidence 4578999999864 77888888889999999998854 33445555444 4566554
No 136
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=80.04 E-value=3 Score=29.07 Aligned_cols=58 Identities=16% Similarity=0.129 Sum_probs=38.9
Q ss_pred cCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCeEE
Q psy4411 36 GRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQQE 95 (99)
Q Consensus 36 g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~~ 95 (99)
++++|+++.+.|-.. -+.+.++..++..|.+|.++.-..-+..+.+.+++++.|.++.
T Consensus 14 ~~l~~k~~lVTGas~--gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (270)
T 3is3_A 14 GRLDGKVALVTGSGR--GIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAI 71 (270)
T ss_dssp TCCTTCEEEESCTTS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEE
T ss_pred CCcCCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEE
Confidence 458899999999765 4999999999999999988643221112233444445554443
No 137
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=79.96 E-value=5.7 Score=29.92 Aligned_cols=53 Identities=11% Similarity=0.104 Sum_probs=39.2
Q ss_pred CcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCC----CCCHHHH----HHHHhcCCeEE
Q psy4411 40 GLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNL----GMPESIQ----EFVASKGKQQE 95 (99)
Q Consensus 40 g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~----~~~~~~~----~~a~~~g~~~~ 95 (99)
+++++++|.+. +.-.++..++++|.+|+++.+... .+++++. +.+++.|+++.
T Consensus 178 ~~~vvViGgG~---~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~i~ 238 (474)
T 1zmd_A 178 PEKMVVIGAGV---IGVELGSVWQRLGADVTAVEFLGHVGGVGIDMEISKNFQRILQKQGFKFK 238 (474)
T ss_dssp CSEEEEECCSH---HHHHHHHHHHHTTCEEEEECSSSSSSCSSCCHHHHHHHHHHHHHTTCEEE
T ss_pred CceEEEECCCH---HHHHHHHHHHHcCCEEEEEeccCccCCcccCHHHHHHHHHHHHHCCCEEE
Confidence 57999999754 888888999999999999987543 2355543 44567777664
No 138
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=79.79 E-value=2.6 Score=33.30 Aligned_cols=36 Identities=11% Similarity=-0.028 Sum_probs=31.9
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPP 75 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~ 75 (99)
.+.|++++++|=+ ++.++.+..+..||++|++..|.
T Consensus 274 ~L~GktVgIIG~G---~IG~~vA~~l~~~G~~V~v~d~~ 309 (494)
T 3d64_A 274 MIAGKIAVVAGYG---DVGKGCAQSLRGLGATVWVTEID 309 (494)
T ss_dssp CCTTCEEEEECCS---HHHHHHHHHHHTTTCEEEEECSC
T ss_pred ccCCCEEEEEccC---HHHHHHHHHHHHCCCEEEEEeCC
Confidence 5999999999953 59999999999999999998773
No 139
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=79.75 E-value=3.5 Score=31.24 Aligned_cols=49 Identities=12% Similarity=0.098 Sum_probs=35.9
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCe
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQ 93 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~ 93 (99)
.+.+.+|+++|-+ ++....+..+..+|++|+++-+. ++..+.+++.|.+
T Consensus 169 ~l~g~~V~ViGaG---~iG~~aa~~a~~~Ga~V~v~D~~-----~~~~~~~~~lGa~ 217 (401)
T 1x13_A 169 KVPPAKVMVIGAG---VAGLAAIGAANSLGAIVRAFDTR-----PEVKEQVQSMGAE 217 (401)
T ss_dssp EECCCEEEEECCS---HHHHHHHHHHHHTTCEEEEECSC-----GGGHHHHHHTTCE
T ss_pred CcCCCEEEEECCC---HHHHHHHHHHHHCCCEEEEEcCC-----HHHHHHHHHcCCE
Confidence 3678999999964 49999999999999998876553 2334445555554
No 140
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=79.19 E-value=5 Score=31.94 Aligned_cols=34 Identities=18% Similarity=0.039 Sum_probs=30.2
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEEC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVS 73 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~ 73 (99)
+++|++|++-|.+| |....+..+..+|++++.++
T Consensus 241 ~l~g~tVaVQG~GN---VG~~aa~~L~e~GakVVavs 274 (501)
T 3mw9_A 241 GFGDKTFVVQGFGN---VGLHSMRYLHRFGAKCITVG 274 (501)
T ss_dssp SSTTCEEEEECCSH---HHHHHHHHHHHTTCEEEEEE
T ss_pred CcCCCEEEEECCCH---HHHHHHHHHHHCCCEEEEEE
Confidence 48999999999754 99999999999999998765
No 141
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=78.98 E-value=6.6 Score=27.01 Aligned_cols=55 Identities=15% Similarity=0.066 Sum_probs=40.2
Q ss_pred CCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCC-CCCCHHHHHHH-HhcCCeEE
Q psy4411 38 VNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPN-LGMPESIQEFV-ASKGKQQE 95 (99)
Q Consensus 38 l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~-~~~~~~~~~~a-~~~g~~~~ 95 (99)
..+++++++|.+. ++-.++..+..+|.+++++.+.. +..++++.+++ ++.|+++.
T Consensus 145 ~~~~~v~viG~g~---~~~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 201 (315)
T 3r9u_A 145 YKNKEVAVLGGGD---TALEEALYLANICSKIYLIHRRDEFRAAPSTVEKVKKNEKIELI 201 (315)
T ss_dssp GTTSEEEEECCBH---HHHHHHHHHHTTSSEEEEECSSSSCBSCHHHHHHHHHCTTEEEE
T ss_pred cCcCEEEEECCCH---HHHHHHHHHHhhCCEEEEEEeCCCCCCCHHHHHHHHhcCCeEEE
Confidence 5678999999754 77788888889999999999854 34456666655 45565553
No 142
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=78.83 E-value=4.6 Score=30.04 Aligned_cols=40 Identities=20% Similarity=0.262 Sum_probs=34.4
Q ss_pred HHhc-CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 33 EEMG-RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 33 e~~g-~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
++.+ +++|++++.+|-++. |.+.++..+...|++|+++.-
T Consensus 157 ~~~~i~l~gk~vvVIG~s~i--VG~p~A~lL~~~gAtVtv~hs 197 (301)
T 1a4i_A 157 KETGVPIAGRHAVVVGRSKI--VGAPMHDLLLWNNATVTTCHS 197 (301)
T ss_dssp HTTTCCCTTCEEEEECCCTT--THHHHHHHHHHTTCEEEEECT
T ss_pred HHcCCCCCCCEEEEECCCch--HHHHHHHHHHhCCCeEEEEEC
Confidence 4444 699999999999876 899999999999999999964
No 143
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=78.69 E-value=4.9 Score=29.99 Aligned_cols=36 Identities=22% Similarity=0.207 Sum_probs=32.2
Q ss_pred hc-CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEE
Q psy4411 35 MG-RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYV 72 (99)
Q Consensus 35 ~g-~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~ 72 (99)
++ +++|++++.+|-++. |.+.++..+...|.+|+++
T Consensus 171 ~g~~l~gk~vvVIG~G~i--VG~~~A~~L~~~gAtVtv~ 207 (320)
T 1edz_A 171 EGNRLYGKKCIVINRSEI--VGRPLAALLANDGATVYSV 207 (320)
T ss_dssp TTCTTTTCEEEEECCCTT--THHHHHHHHHTTSCEEEEE
T ss_pred cCCCCCCCEEEEECCCcc--hHHHHHHHHHHCCCEEEEE
Confidence 56 799999999999876 7899999999999999888
No 144
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=78.53 E-value=8.3 Score=26.87 Aligned_cols=36 Identities=14% Similarity=0.197 Sum_probs=30.7
Q ss_pred CCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCC
Q psy4411 38 VNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPN 76 (99)
Q Consensus 38 l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~ 76 (99)
+.+++++++|-++ ++--++..++++|.+|+++....
T Consensus 143 ~~~k~vvViGgG~---ig~E~A~~l~~~g~~Vtlv~~~~ 178 (312)
T 4gcm_A 143 FKNKRLFVIGGGD---SAVEEGTFLTKFADKVTIVHRRD 178 (312)
T ss_dssp GTTCEEEEECCSH---HHHHHHHHHTTTCSEEEEECSSS
T ss_pred cCCCEEEEECCCH---HHHHHHHHHHhcCCEEEEEeccc
Confidence 5678999999864 88889999999999999998744
No 145
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=78.50 E-value=3.5 Score=31.13 Aligned_cols=39 Identities=26% Similarity=0.225 Sum_probs=32.2
Q ss_pred HHhc--CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 33 EEMG--RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 33 e~~g--~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
++.| +++|++++++|-+ +|....+..+..+|++|++.-+
T Consensus 166 ~~~G~~~L~GktV~I~G~G---nVG~~~A~~l~~~GakVvvsD~ 206 (355)
T 1c1d_A 166 AHRGLGSLDGLTVLVQGLG---AVGGSLASLAAEAGAQLLVADT 206 (355)
T ss_dssp HHTTCCCSTTCEEEEECCS---HHHHHHHHHHHHTTCEEEEECS
T ss_pred HhcCCCCCCCCEEEEECcC---HHHHHHHHHHHHCCCEEEEEeC
Confidence 4446 5999999999974 4999999999999999995544
No 146
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=78.49 E-value=8.3 Score=30.08 Aligned_cols=61 Identities=10% Similarity=0.099 Sum_probs=46.5
Q ss_pred HHHhc---CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCeE
Q psy4411 32 KEEMG---RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQQ 94 (99)
Q Consensus 32 ~e~~g---~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~ 94 (99)
+|+|. +|+|.+|+-+=...- -.--|++.+..+|++|..++..-|...+++.+.+.+.|+.+
T Consensus 43 r~~~~~~~pl~G~ri~~~lH~~~--~Ta~l~~tL~~~GA~v~~~~~n~~stqd~~aaal~~~gi~v 106 (435)
T 3gvp_A 43 RKRAQGEKPLAGAKIVGCTHITA--QTAVLMETLGALGAQCRWAACNIYSTLNEVAAALAESGFPV 106 (435)
T ss_dssp HHHHSTTCTTTTCEEEEEECCSH--HHHHHHHHHHHTTCEEEEEESSSSCCCHHHHHHHHHHTCCE
T ss_pred HHHHhccCCCCCCEEEEEEccHH--HHHHHHHHHHHCCCEEEEEecCCCcChHHHHHHHHhcCCeE
Confidence 45554 599999998876542 33467778888999999998878888888887777777654
No 147
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=78.36 E-value=8.2 Score=28.82 Aligned_cols=55 Identities=15% Similarity=0.126 Sum_probs=39.6
Q ss_pred CCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCC----CCHHH----HHHHHhcCCeEEE
Q psy4411 39 NGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLG----MPESI----QEFVASKGKQQEV 96 (99)
Q Consensus 39 ~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~----~~~~~----~~~a~~~g~~~~~ 96 (99)
.+++++++|.+. +.-.++..++.+|.+++++.+.... +++++ .+.+++.|+++..
T Consensus 148 ~~~~vvViGgG~---~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~i~~ 210 (452)
T 2cdu_A 148 KAKTITIIGSGY---IGAELAEAYSNQNYNVNLIDGHERVLYKYFDKEFTDILAKDYEAHGVNLVL 210 (452)
T ss_dssp GCSEEEEECCSH---HHHHHHHHHHTTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHHTTCEEEE
T ss_pred cCCeEEEECcCH---HHHHHHHHHHhcCCEEEEEEcCCchhhhhhhhhHHHHHHHHHHHCCCEEEc
Confidence 467999999764 7888888899999999999864332 34544 3446677877643
No 148
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=78.06 E-value=5.1 Score=28.08 Aligned_cols=54 Identities=7% Similarity=0.190 Sum_probs=41.9
Q ss_pred CCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCeE
Q psy4411 38 VNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQQ 94 (99)
Q Consensus 38 l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~ 94 (99)
+++++++.+|.+.. .+--++..+..+|.++++.... ..+.+.+.+.+++.|..+
T Consensus 144 ~~~~~~~VIggG~~--~~~e~a~~~~~~~~~v~i~~~~-~~~~~~~~~~l~~~g~~~ 197 (304)
T 4fk1_A 144 LKDQPLIIISENED--HTLHMTKLVYNWSTDLVIATNG-NELSQTIMDELSNKNIPV 197 (304)
T ss_dssp GTTSCEEEECCSHH--HHHHHHHHHTTTCSCEEEECSS-CCCCHHHHHHHHTTTCCE
T ss_pred hcCCceeeecCCCc--hhhhHHHHHHhCCceEEEEecc-ccchhhhhhhhhccceeE
Confidence 56778888888764 6667788888999999988764 457788888888887665
No 149
>1wkv_A Cysteine synthase; homodimer, open alpha/beta folding, transferase; HET: PLP; 2.00A {Aeropyrum pernix} SCOP: c.79.1.1
Probab=77.99 E-value=3.4 Score=31.33 Aligned_cols=51 Identities=16% Similarity=0.078 Sum_probs=38.7
Q ss_pred CcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCeEE
Q psy4411 40 GLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQQE 95 (99)
Q Consensus 40 g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~~ 95 (99)
|.+|+-. ..||...+++.+|+++|++++++-|+.. ++.-...++..|+++.
T Consensus 145 g~~Iv~a---ssGNhG~AlA~aaa~~Gl~~~ivmp~~~--~~~k~~~~~~~GAeVv 195 (389)
T 1wkv_A 145 GSLVADA---TSSNFGVALSAVARLYGYRARVYLPGAA--EEFGKLLPRLLGAQVI 195 (389)
T ss_dssp TCEEEEE---CCHHHHHHHHHHHHHTTCEEEEEEETTS--CHHHHHHHHHTTCEEE
T ss_pred CCEEEEE---CCcHHHHHHHHHHHHcCCeEEEEECCCC--CHHHHHHHHHcCCEEE
Confidence 4455522 3345899999999999999999999874 4444567888899886
No 150
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=77.86 E-value=7.7 Score=28.99 Aligned_cols=54 Identities=6% Similarity=0.044 Sum_probs=39.2
Q ss_pred CCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCC----CCHHH----HHHHHhcCCeEE
Q psy4411 39 NGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLG----MPESI----QEFVASKGKQQE 95 (99)
Q Consensus 39 ~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~----~~~~~----~~~a~~~g~~~~ 95 (99)
.+++++++|.+. +.-.++..++++|.+++++.+.... +++++ .+.+++.|+++.
T Consensus 148 ~~~~vvViGgG~---~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~ 209 (431)
T 1q1r_A 148 ADNRLVVIGGGY---IGLEVAATAIKANMHVTLLDTAARVLERVTAPPVSAFYEHLHREAGVDIR 209 (431)
T ss_dssp TTCEEEEECCSH---HHHHHHHHHHHTTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHHHTCEEE
T ss_pred cCCeEEEECCCH---HHHHHHHHHHhCCCEEEEEEeCCccccchhhHHHHHHHHHHHHhCCeEEE
Confidence 478999999754 7788888899999999999874332 34544 344567777664
No 151
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=77.79 E-value=7.5 Score=29.24 Aligned_cols=52 Identities=12% Similarity=0.022 Sum_probs=37.9
Q ss_pred CcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCC---CCHHH----HHHHHhcCCeE
Q psy4411 40 GLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLG---MPESI----QEFVASKGKQQ 94 (99)
Q Consensus 40 g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~---~~~~~----~~~a~~~g~~~ 94 (99)
+++++++|.+. +.-.++..++++|.+++++.+.... .++++ .+.+++.|+++
T Consensus 171 ~~~vvViGgG~---~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i 229 (458)
T 1lvl_A 171 PQHLVVVGGGY---IGLELGIAYRKLGAQVSVVEARERILPTYDSELTAPVAESLKKLGIAL 229 (458)
T ss_dssp CSEEEEECCSH---HHHHHHHHHHHHTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEE
T ss_pred CCeEEEECcCH---HHHHHHHHHHHCCCeEEEEEcCCccccccCHHHHHHHHHHHHHCCCEE
Confidence 57999999764 7888899999999999999875332 24444 34456667665
No 152
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=77.75 E-value=9.9 Score=28.55 Aligned_cols=53 Identities=13% Similarity=0.147 Sum_probs=38.8
Q ss_pred CcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCC---CCHHHH----HHHHhcCCeEE
Q psy4411 40 GLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLG---MPESIQ----EFVASKGKQQE 95 (99)
Q Consensus 40 g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~---~~~~~~----~~a~~~g~~~~ 95 (99)
+++++++|.+. +.-.++..++++|.+|+++.+.... +++++. +.+++.|+++.
T Consensus 183 ~~~vvViGgG~---~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~ 242 (478)
T 1v59_A 183 PKRLTIIGGGI---IGLEMGSVYSRLGSKVTVVEFQPQIGASMDGEVAKATQKFLKKQGLDFK 242 (478)
T ss_dssp CSEEEEECCSH---HHHHHHHHHHHTTCEEEEECSSSSSSSSSCHHHHHHHHHHHHHTTCEEE
T ss_pred CceEEEECCCH---HHHHHHHHHHHcCCEEEEEEeCCccccccCHHHHHHHHHHHHHCCCEEE
Confidence 58999999764 8888899999999999999874322 344443 44567787664
No 153
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=77.72 E-value=13 Score=28.48 Aligned_cols=57 Identities=12% Similarity=0.071 Sum_probs=40.7
Q ss_pred cCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCC---CHHH----HHHHHhcCCeEE
Q psy4411 36 GRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGM---PESI----QEFVASKGKQQE 95 (99)
Q Consensus 36 g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~---~~~~----~~~a~~~g~~~~ 95 (99)
..+.+++++++|.+. +.-.++..++.+|.+++++.+....+ ++++ .+.+++.|+++.
T Consensus 210 ~~~~g~~vvViGgG~---~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~ 273 (523)
T 1mo9_A 210 DYEPGSTVVVVGGSK---TAVEYGCFFNATGRRTVMLVRTEPLKLIKDNETRAYVLDRMKEQGMEII 273 (523)
T ss_dssp CSCCCSEEEEECCSH---HHHHHHHHHHHTTCEEEEECSSCTTTTCCSHHHHHHHHHHHHHTTCEEE
T ss_pred HhcCCCeEEEECCCH---HHHHHHHHHHHcCCeEEEEEecCcccccccHHHHHHHHHHHHhCCcEEE
Confidence 344558999999864 77888889999999999998754322 4444 344567777664
No 154
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=77.45 E-value=8.8 Score=25.82 Aligned_cols=37 Identities=16% Similarity=0.202 Sum_probs=30.4
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPP 75 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~ 75 (99)
+++++++.+.|-.. .+.+.++..++.-|.+|+++.-.
T Consensus 4 ~l~~k~vlVTGasg--giG~~~a~~l~~~G~~V~~~~r~ 40 (258)
T 3afn_B 4 DLKGKRVLITGSSQ--GIGLATARLFARAGAKVGLHGRK 40 (258)
T ss_dssp GGTTCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEECCC
Confidence 46788898888755 49999999999999998887643
No 155
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=77.43 E-value=7.7 Score=31.37 Aligned_cols=56 Identities=14% Similarity=0.059 Sum_probs=40.4
Q ss_pred CCCcEEEEECC-CCCchhHHHHHHHHhhCCCEEEEECCCCCCC----C---HHHHHHHHhcCCeEE
Q psy4411 38 VNGLTITMVGD-LKNGRTVHSLARLLTLYDVKLNYVSPPNLGM----P---ESIQEFVASKGKQQE 95 (99)
Q Consensus 38 l~g~~i~~vGd-~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~----~---~~~~~~a~~~g~~~~ 95 (99)
..|++|+++|. +.+ +.-.++..++++|.+|+++.+..+.. + ..+.+.+++.|+++.
T Consensus 526 ~~gk~VvVIG~GgG~--~g~e~A~~l~~~G~~Vtlv~~~~l~~~~~~~~~~~~~~~~l~~~GV~i~ 589 (729)
T 1o94_A 526 KIGKRVVILNADTYF--MAPSLAEKLATAGHEVTIVSGVHLANYMHFTLEYPNMMRRLHELHVEEL 589 (729)
T ss_dssp CCCSEEEEEECCCSS--HHHHHHHHHHHTTCEEEEEESSCTTHHHHHTTCHHHHHHHHHHTTCEEE
T ss_pred CCCCeEEEEcCCCCc--hHHHHHHHHHHcCCEEEEEecccccccccccccHHHHHHHHHhCCCEEE
Confidence 45789999994 333 88899999999999999999865211 1 234455677887764
No 156
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=77.43 E-value=9.8 Score=27.09 Aligned_cols=55 Identities=13% Similarity=0.185 Sum_probs=43.6
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCeEEE
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQQEV 96 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~~~ 96 (99)
+|+|+++.+.|-.. -+.+..+..++.-|.+|.++.-. ..++..+.+++.|.+...
T Consensus 6 ~L~GKvalVTGas~--GIG~aiA~~la~~Ga~Vvi~~r~---~~~~~~~~~~~~g~~~~~ 60 (247)
T 4hp8_A 6 SLEGRKALVTGANT--GLGQAIAVGLAAAGAEVVCAARR---APDETLDIIAKDGGNASA 60 (247)
T ss_dssp CCTTCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESS---CCHHHHHHHHHTTCCEEE
T ss_pred CCCCCEEEEeCcCC--HHHHHHHHHHHHcCCEEEEEeCC---cHHHHHHHHHHhCCcEEE
Confidence 68999888888766 49999999999999999998643 336677777877776543
No 157
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=77.28 E-value=3.9 Score=30.18 Aligned_cols=35 Identities=20% Similarity=0.250 Sum_probs=30.9
Q ss_pred CCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCC
Q psy4411 38 VNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPP 75 (99)
Q Consensus 38 l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~ 75 (99)
+.|+||+++|-+. ..+.++..+.++|++++++.|.
T Consensus 12 ~~~k~IlIlG~G~---~g~~la~aa~~~G~~vi~~d~~ 46 (389)
T 3q2o_A 12 LPGKTIGIIGGGQ---LGRMMALAAKEMGYKIAVLDPT 46 (389)
T ss_dssp CTTSEEEEECCSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCEEEEECCCH---HHHHHHHHHHHcCCEEEEEeCC
Confidence 6789999999864 8899999999999999999874
No 158
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=77.17 E-value=10 Score=27.56 Aligned_cols=55 Identities=15% Similarity=0.087 Sum_probs=39.3
Q ss_pred CCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCC----CCHHH----HHHHHhcCCeEEE
Q psy4411 39 NGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLG----MPESI----QEFVASKGKQQEV 96 (99)
Q Consensus 39 ~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~----~~~~~----~~~a~~~g~~~~~ 96 (99)
.+++++++|.+. +.-.++..++++|.+++++.+.... .++++ .+.+++.|+++..
T Consensus 144 ~~~~v~ViGgG~---~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~l~~~l~~~gv~i~~ 206 (384)
T 2v3a_A 144 GKRRVLLLGAGL---IGCEFANDLSSGGYQLDVVAPCEQVMPGLLHPAAAKAVQAGLEGLGVRFHL 206 (384)
T ss_dssp TCCEEEEECCSH---HHHHHHHHHHHTTCEEEEEESSSSSSTTTSCHHHHHHHHHHHHTTTCEEEE
T ss_pred cCCeEEEECCCH---HHHHHHHHHHhCCCeEEEEecCcchhhcccCHHHHHHHHHHHHHcCCEEEe
Confidence 378999999864 7888889999999999999764322 24444 3445677877643
No 159
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=76.82 E-value=3.4 Score=32.43 Aligned_cols=36 Identities=17% Similarity=0.194 Sum_probs=31.8
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPP 75 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~ 75 (99)
.+.|++|+++|=++ +..+++..+..+|+++....|.
T Consensus 139 ~l~g~~vgIIG~G~---IG~~vA~~l~~~G~~V~~~d~~ 174 (529)
T 1ygy_A 139 EIFGKTVGVVGLGR---IGQLVAQRIAAFGAYVVAYDPY 174 (529)
T ss_dssp CCTTCEEEEECCSH---HHHHHHHHHHTTTCEEEEECTT
T ss_pred ccCCCEEEEEeeCH---HHHHHHHHHHhCCCEEEEECCC
Confidence 48899999999754 9999999999999999988773
No 160
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=76.74 E-value=5.8 Score=29.07 Aligned_cols=53 Identities=11% Similarity=0.077 Sum_probs=38.4
Q ss_pred CcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCC--CCHHH----HHHHHhcCCeEE
Q psy4411 40 GLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLG--MPESI----QEFVASKGKQQE 95 (99)
Q Consensus 40 g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~--~~~~~----~~~a~~~g~~~~ 95 (99)
+++++++|.+. +.-.++..++.+|.+|+++.+.... +++++ .+.+++.|+++.
T Consensus 143 ~~~vvViGgG~---~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~l~~~l~~~gV~i~ 201 (367)
T 1xhc_A 143 SGEAIIIGGGF---IGLELAGNLAEAGYHVKLIHRGAMFLGLDEELSNMIKDMLEETGVKFF 201 (367)
T ss_dssp HSEEEEEECSH---HHHHHHHHHHHTTCEEEEECSSSCCTTCCHHHHHHHHHHHHHTTEEEE
T ss_pred CCcEEEECCCH---HHHHHHHHHHhCCCEEEEEeCCCeeccCCHHHHHHHHHHHHHCCCEEE
Confidence 47999999864 7888888999999999999874332 34544 344567776553
No 161
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=76.64 E-value=8.8 Score=26.87 Aligned_cols=57 Identities=12% Similarity=0.041 Sum_probs=40.1
Q ss_pred cCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCeEEE
Q psy4411 36 GRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQQEV 96 (99)
Q Consensus 36 g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~~~ 96 (99)
.+++|+++.+.|-.. -+.+.++..++.-|.+|+++.-. +..++..+++++.|.+++.
T Consensus 27 ~~l~gk~~lVTGas~--GIG~aia~~la~~G~~V~~~~r~--~~~~~~~~~~~~~~~~~~~ 83 (273)
T 3uf0_A 27 FSLAGRTAVVTGAGS--GIGRAIAHGYARAGAHVLAWGRT--DGVKEVADEIADGGGSAEA 83 (273)
T ss_dssp TCCTTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESS--THHHHHHHHHHTTTCEEEE
T ss_pred cCCCCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEcCH--HHHHHHHHHHHhcCCcEEE
Confidence 358899999999865 49999999999999999988732 1123344444555555443
No 162
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=76.60 E-value=8.5 Score=25.86 Aligned_cols=33 Identities=15% Similarity=0.146 Sum_probs=28.6
Q ss_pred CCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEE
Q psy4411 38 VNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYV 72 (99)
Q Consensus 38 l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~ 72 (99)
++++++.+.|-.. .+.+.++..++..|.+|+++
T Consensus 3 l~~~~vlItGasg--giG~~~a~~l~~~G~~V~~~ 35 (247)
T 2hq1_A 3 LKGKTAIVTGSSR--GLGKAIAWKLGNMGANIVLN 35 (247)
T ss_dssp TTTCEEEESSCSS--HHHHHHHHHHHHTTCEEEEE
T ss_pred CCCcEEEEECCCc--hHHHHHHHHHHHCCCEEEEE
Confidence 5788899999765 49999999999999999988
No 163
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=76.60 E-value=11 Score=26.08 Aligned_cols=54 Identities=9% Similarity=0.076 Sum_probs=38.6
Q ss_pred CCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCC-CCCCHHHHHH----HHhcCCeE
Q psy4411 38 VNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPN-LGMPESIQEF----VASKGKQQ 94 (99)
Q Consensus 38 l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~-~~~~~~~~~~----a~~~g~~~ 94 (99)
..+++++++|.+. ++-.++..++.+|.+++++.+.. +.+++.+.+. +++.|+++
T Consensus 143 ~~~~~v~ViG~G~---~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~l~~~l~~~gv~i 201 (320)
T 1trb_A 143 YRNQKVAVIGGGN---TAVEEALYLSNIASEVHLIHRRDGFRAEKILIKRLMDKVENGNIIL 201 (320)
T ss_dssp GTTSEEEEECSSH---HHHHHHHHHTTTSSEEEEECSSSSCCCCHHHHHHHHHHHHTSSEEE
T ss_pred cCCCeEEEECCCH---HHHHHHHHHHhcCCeEEEEEeCCccccCHHHHHHHHHhcccCCeEE
Confidence 3578999999864 77788888889999999999854 3345544433 44566554
No 164
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=76.56 E-value=8.4 Score=28.81 Aligned_cols=53 Identities=9% Similarity=0.011 Sum_probs=38.2
Q ss_pred CcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCC---CCHHH----HHHHHhcCCeEE
Q psy4411 40 GLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLG---MPESI----QEFVASKGKQQE 95 (99)
Q Consensus 40 g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~---~~~~~----~~~a~~~g~~~~ 95 (99)
+++++++|.+. +.-.++..++++|.+++++.+.... .++++ .+.+++.|+++.
T Consensus 167 ~~~vvIiGgG~---~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~ 226 (455)
T 2yqu_A 167 PKRLIVVGGGV---IGLELGVVWHRLGAEVIVLEYMDRILPTMDLEVSRAAERVFKKQGLTIR 226 (455)
T ss_dssp CSEEEEECCSH---HHHHHHHHHHHTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHHTCEEE
T ss_pred CCeEEEECCCH---HHHHHHHHHHHcCCEEEEEecCCccccccCHHHHHHHHHHHHHCCCEEE
Confidence 57999999764 7888888899999999999875432 23443 344566776654
No 165
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=76.05 E-value=5.5 Score=28.17 Aligned_cols=37 Identities=5% Similarity=0.098 Sum_probs=31.4
Q ss_pred cCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 36 GRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 36 g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
.+++|+++.+.|-..- +.+.++..++.-|.+|+++.-
T Consensus 43 ~~l~gk~vlVTGas~G--IG~aia~~la~~G~~V~~~~r 79 (291)
T 3ijr_A 43 EKLKGKNVLITGGDSG--IGRAVSIAFAKEGANIAIAYL 79 (291)
T ss_dssp STTTTCEEEEETTTSH--HHHHHHHHHHHTTCEEEEEES
T ss_pred cCCCCCEEEEeCCCcH--HHHHHHHHHHHCCCEEEEEeC
Confidence 3578999999997654 999999999999999988764
No 166
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=76.01 E-value=9 Score=29.63 Aligned_cols=38 Identities=13% Similarity=0.145 Sum_probs=31.4
Q ss_pred HHhc-CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEEC
Q psy4411 33 EEMG-RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVS 73 (99)
Q Consensus 33 e~~g-~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~ 73 (99)
+++| +++|+++++.|.++ |....+..+..+|++++-++
T Consensus 210 ~~~g~~l~gk~vaVqG~Gn---VG~~~a~~L~~~GakVVavs 248 (419)
T 3aoe_E 210 KRRGLDLRGARVVVQGLGQ---VGAAVALHAERLGMRVVAVA 248 (419)
T ss_dssp HHHTCCCTTCEEEEECCSH---HHHHHHHHHHHTTCEEEEEE
T ss_pred HhcCCCccCCEEEEECcCH---HHHHHHHHHHHCCCEEEEEE
Confidence 3455 69999999999754 99999999999999998444
No 167
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=75.83 E-value=16 Score=26.76 Aligned_cols=37 Identities=16% Similarity=0.234 Sum_probs=32.3
Q ss_pred cCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 36 GRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 36 g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
++++|+++.+.|-..- +...++..++.-|.+|++++-
T Consensus 41 ~~l~gk~vlVTGas~G--IG~aia~~La~~Ga~Vvl~~r 77 (346)
T 3kvo_A 41 GRLAGCTVFITGASRG--IGKAIALKAAKDGANIVIAAK 77 (346)
T ss_dssp STTTTCEEEEETTTSH--HHHHHHHHHHTTTCEEEEEES
T ss_pred CCCCCCEEEEeCCChH--HHHHHHHHHHHCCCEEEEEEC
Confidence 5689999999998654 999999999999999998874
No 168
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=75.52 E-value=6.4 Score=27.21 Aligned_cols=36 Identities=14% Similarity=0.059 Sum_probs=30.7
Q ss_pred cCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEEC
Q psy4411 36 GRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVS 73 (99)
Q Consensus 36 g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~ 73 (99)
.+++|+++.+.|-.. -+.+.++..++.-|.+|++++
T Consensus 4 ~~l~~k~vlVTGas~--GIG~aia~~la~~G~~V~~~~ 39 (259)
T 3edm_A 4 QRFTNRTIVVAGAGR--DIGRACAIRFAQEGANVVLTY 39 (259)
T ss_dssp CTTTTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEE
T ss_pred cCCCCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEc
Confidence 357899999999765 499999999999999999873
No 169
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=75.44 E-value=4.9 Score=28.64 Aligned_cols=59 Identities=14% Similarity=0.089 Sum_probs=41.9
Q ss_pred hcCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCeEEE
Q psy4411 35 MGRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQQEV 96 (99)
Q Consensus 35 ~g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~~~ 96 (99)
|.+|+|+++.+.|-..- +.+..+..++.-|.+|.++.-.. +--+++.+++++.|.+...
T Consensus 2 y~sL~gKvalVTGas~G--IG~aiA~~la~~Ga~Vv~~~~~~-~~~~~~~~~i~~~g~~~~~ 60 (254)
T 4fn4_A 2 YQSLKNKVVIVTGAGSG--IGRAIAKKFALNDSIVVAVELLE-DRLNQIVQELRGMGKEVLG 60 (254)
T ss_dssp CGGGTTCEEEEETTTSH--HHHHHHHHHHHTTCEEEEEESCH-HHHHHHHHHHHHTTCCEEE
T ss_pred CCCCCCCEEEEeCCCCH--HHHHHHHHHHHcCCEEEEEECCH-HHHHHHHHHHHhcCCcEEE
Confidence 45799999999997664 99999999999999998876421 1112344556666766543
No 170
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=75.31 E-value=6.2 Score=29.93 Aligned_cols=54 Identities=7% Similarity=-0.013 Sum_probs=39.6
Q ss_pred CCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCC---CCCHHH----HHHHHhcCCeEE
Q psy4411 39 NGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNL---GMPESI----QEFVASKGKQQE 95 (99)
Q Consensus 39 ~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~---~~~~~~----~~~a~~~g~~~~ 95 (99)
.+++++++|.+. +.-.++..++++|.+++++.+... .+++++ .+.+++.|+++.
T Consensus 185 ~~~~vvViGgG~---~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~ 245 (480)
T 3cgb_A 185 KVEDVTIIGGGA---IGLEMAETFVELGKKVRMIERNDHIGTIYDGDMAEYIYKEADKHHIEIL 245 (480)
T ss_dssp CCCEEEEECCHH---HHHHHHHHHHHTTCEEEEECCGGGTTSSSCHHHHHHHHHHHHHTTCEEE
T ss_pred CCCeEEEECCCH---HHHHHHHHHHhcCCeEEEEEeCCchhhcCCHHHHHHHHHHHHHcCcEEE
Confidence 678999999754 788888899999999999986432 234554 344567787664
No 171
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=75.23 E-value=14 Score=27.73 Aligned_cols=53 Identities=13% Similarity=0.118 Sum_probs=38.7
Q ss_pred CcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCC--CCHHHH----HHHHhcCCeEE
Q psy4411 40 GLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLG--MPESIQ----EFVASKGKQQE 95 (99)
Q Consensus 40 g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~--~~~~~~----~~a~~~g~~~~ 95 (99)
+++++++|.+. +.-.++..++.+|.+|+++.+.... .++++. +.+++.|+++.
T Consensus 176 ~~~vvViGgG~---~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~l~~~l~~~Gv~i~ 234 (467)
T 1zk7_A 176 PERLAVIGSSV---VALELAQAFARLGSKVTVLARNTLFFREDPAIGEAVTAAFRAEGIEVL 234 (467)
T ss_dssp CSEEEEECCSH---HHHHHHHHHHHTTCEEEEECSSCTTTTSCHHHHHHHHHHHHHTTCEEE
T ss_pred CCEEEEECCCH---HHHHHHHHHHHcCCEEEEEEECCccCCCCHHHHHHHHHHHHhCCCEEE
Confidence 68999999754 7888888899999999999875432 345543 34566777653
No 172
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=75.11 E-value=11 Score=28.15 Aligned_cols=53 Identities=9% Similarity=0.106 Sum_probs=38.4
Q ss_pred CcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCC---CCHHH----HHHHHhcCCeEE
Q psy4411 40 GLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLG---MPESI----QEFVASKGKQQE 95 (99)
Q Consensus 40 g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~---~~~~~----~~~a~~~g~~~~ 95 (99)
+++++++|.+. +.-.++..++++|.+|+++.+...- .++++ .+.+++.|+++.
T Consensus 170 ~~~vvViGgG~---~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~ 229 (455)
T 1ebd_A 170 PKSLVVIGGGY---IGIELGTAYANFGTKVTILEGAGEILSGFEKQMAAIIKKRLKKKGVEVV 229 (455)
T ss_dssp CSEEEEECCSH---HHHHHHHHHHHTTCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTCEEE
T ss_pred CCeEEEECCCH---HHHHHHHHHHHcCCcEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEE
Confidence 58999999754 7888888999999999999874322 34444 344567787664
No 173
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=75.10 E-value=15 Score=29.03 Aligned_cols=61 Identities=16% Similarity=0.177 Sum_probs=46.3
Q ss_pred HHHhc---CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCeE
Q psy4411 32 KEEMG---RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQQ 94 (99)
Q Consensus 32 ~e~~g---~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~ 94 (99)
+|+|+ +|+|.+|+-+=...- =.--|++.+..+|++|+.++-.-|.-.+++.+.+.+.|+.+
T Consensus 46 r~~~~~~~pl~g~ri~~~lh~t~--~ta~l~~tl~~~GA~v~~~~~n~~stqd~~aaa~~~~g~~v 109 (488)
T 3ond_A 46 RSEFGPSQPFKGAKITGSLHMTI--QTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAV 109 (488)
T ss_dssp HHHHGGGCTTTTCEEEEESCCSH--HHHHHHHHHHHTTCEEEEECSSTTCCCHHHHHHHHHHTCEE
T ss_pred HHHHhcCCCCCCCEEEEEeccHH--HHHHHHHHHHHcCCeEEEecCCCCCCcHHHHHHHHhcCCeE
Confidence 55554 599999998876542 33467778888999999999888888888877766667654
No 174
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=74.73 E-value=10 Score=29.77 Aligned_cols=49 Identities=8% Similarity=-0.011 Sum_probs=36.9
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCe
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQ 93 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~ 93 (99)
.+.|++|+++|-+ ++..+.+..+..+|++|.++.| ++.-.+.+++.|..
T Consensus 271 ~l~GktV~IiG~G---~IG~~~A~~lka~Ga~Viv~d~-----~~~~~~~A~~~Ga~ 319 (494)
T 3ce6_A 271 LIGGKKVLICGYG---DVGKGCAEAMKGQGARVSVTEI-----DPINALQAMMEGFD 319 (494)
T ss_dssp CCTTCEEEEECCS---HHHHHHHHHHHHTTCEEEEECS-----CHHHHHHHHHTTCE
T ss_pred CCCcCEEEEEccC---HHHHHHHHHHHHCCCEEEEEeC-----CHHHHHHHHHcCCE
Confidence 5789999999964 4999999999999999888765 33333445555543
No 175
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=74.61 E-value=4 Score=32.67 Aligned_cols=36 Identities=17% Similarity=0.042 Sum_probs=29.7
Q ss_pred cCCCC-cEEEEECCCCCchhHHHHHHHHhhC------CCEEEEECC
Q psy4411 36 GRVNG-LTITMVGDLKNGRTVHSLARLLTLY------DVKLNYVSP 74 (99)
Q Consensus 36 g~l~g-~~i~~vGd~~n~rv~~Sl~~~~~~~------G~~v~~~~P 74 (99)
..++| +||++||=++ +.++++..+... |+++++...
T Consensus 49 ~~L~GiKkIgIIGlGs---MG~AmA~nLr~s~~~~g~G~~ViVg~r 91 (525)
T 3fr7_A 49 EAFKGIKQIGVIGWGS---QGPAQAQNLRDSLAEAKSDIVVKIGLR 91 (525)
T ss_dssp HHTTTCSEEEEECCTT---HHHHHHHHHHHHHHHTTCCCEEEEEEC
T ss_pred HHhcCCCEEEEEeEhH---HHHHHHHHHHhcccccCCCCEEEEEeC
Confidence 34899 9999999754 999999999998 998876543
No 176
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=74.60 E-value=7.9 Score=28.62 Aligned_cols=54 Identities=13% Similarity=0.121 Sum_probs=39.4
Q ss_pred CCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCC----CHHH----HHHHHhcCCeEE
Q psy4411 39 NGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGM----PESI----QEFVASKGKQQE 95 (99)
Q Consensus 39 ~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~----~~~~----~~~a~~~g~~~~ 95 (99)
.+++++++|.+. +.-.++..++++|.+++++.+....+ ++++ .+.+++.|+++.
T Consensus 142 ~~~~vvViGgG~---~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~ 203 (410)
T 3ef6_A 142 SATRLLIVGGGL---IGCEVATTARKLGLSVTILEAGDELLVRVLGRRIGAWLRGLLTELGVQVE 203 (410)
T ss_dssp TTCEEEEECCSH---HHHHHHHHHHHTTCEEEEECSSSSSSHHHHCHHHHHHHHHHHHHHTCEEE
T ss_pred cCCeEEEECCCH---HHHHHHHHHHhCCCeEEEEecCCccchhhcCHHHHHHHHHHHHHCCCEEE
Confidence 478999999754 77788888899999999999865433 3433 344566777664
No 177
>1v8z_A Tryptophan synthase beta chain 1; beta+alpha, riken structural genomics/proteomics initiative, structural genomics, lyase; HET: PLP; 2.21A {Pyrococcus furiosus} SCOP: c.79.1.1 PDB: 1wdw_B*
Probab=74.59 E-value=3.6 Score=30.52 Aligned_cols=46 Identities=9% Similarity=-0.114 Sum_probs=33.8
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCCCCCCHHH-HHHHHhcCCeEEEEe
Q psy4411 53 RTVHSLARLLTLYDVKLNYVSPPNLGMPESI-QEFVASKGKQQEVYE 98 (99)
Q Consensus 53 rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~-~~~a~~~g~~~~~~~ 98 (99)
|...+++.+|+++|++++++-|+.-...... ++.++..|+++..++
T Consensus 109 N~g~a~A~aa~~~G~~~~iv~p~~~~~~~~~~~~~~~~~GA~V~~~~ 155 (388)
T 1v8z_A 109 QHGVATAMAGALLGMKVDIYMGAEDVERQKMNVFRMKLLGANVIPVN 155 (388)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEHHHHTTCHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHcCCcEEEEEcCCchhhhhhHHHHHHHCCCEEEEEC
Confidence 3899999999999999999999741111122 456778888887653
No 178
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=74.22 E-value=10 Score=28.45 Aligned_cols=54 Identities=11% Similarity=-0.016 Sum_probs=38.6
Q ss_pred CCcEEEEECCCCCchhHHHHHHHHhhC-CCEEEEECCCCCC----CCHHH----HHHHHhcCCeEE
Q psy4411 39 NGLTITMVGDLKNGRTVHSLARLLTLY-DVKLNYVSPPNLG----MPESI----QEFVASKGKQQE 95 (99)
Q Consensus 39 ~g~~i~~vGd~~n~rv~~Sl~~~~~~~-G~~v~~~~P~~~~----~~~~~----~~~a~~~g~~~~ 95 (99)
.+++++++|.+. +.-.++..++.+ |.+++++.+.... +++++ .+.+++.|+++.
T Consensus 158 ~~~~vvViGgG~---~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~ 220 (472)
T 3iwa_A 158 EVSKAVIVGGGF---IGLEMAVSLADMWGIDTTVVELADQIMPGFTSKSLSQMLRHDLEKNDVVVH 220 (472)
T ss_dssp SCSEEEEECCSH---HHHHHHHHHHHHHCCEEEEECSSSSSSTTTSCHHHHHHHHHHHHHTTCEEE
T ss_pred CCCEEEEECCCH---HHHHHHHHHHHhcCCcEEEEEccCcccccccCHHHHHHHHHHHHhcCCEEE
Confidence 468999999864 777888888888 9999999874432 24444 344567777664
No 179
>1jf8_A Arsenate reductase; ptpase I fold, P-loop, sulfinic acid, oxidoreductase; 1.12A {Staphylococcus aureus} SCOP: c.44.1.1 PDB: 1jfv_A 2fxi_A 1lju_A* 1rxi_A 1rxe_A 1ljl_A 2cd7_A 1lk0_A
Probab=73.93 E-value=10 Score=24.10 Aligned_cols=54 Identities=7% Similarity=-0.024 Sum_probs=33.0
Q ss_pred cEEEEECCCC--CchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCeE
Q psy4411 41 LTITMVGDLK--NGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQQ 94 (99)
Q Consensus 41 ~~i~~vGd~~--n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~ 94 (99)
++|.||.-+| .|+++-.++.-...-+..+.-++-....+++..++.+++.|+++
T Consensus 4 ~~VLFVC~gN~cRSpmAEa~~~~~~~~~~~v~SAGt~~~~~~p~a~~~l~~~Gid~ 59 (131)
T 1jf8_A 4 KTIYFISTGNSARSQMAEGWGKEILGEGWNVYSAGIETHGVNPKAIEAMKEVDIDI 59 (131)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHSTTTEEEEEEESSCCCCCHHHHHHHHHTTCCC
T ss_pred CEEEEEcCCcchHHHHHHHHHHHhcCCCEEEEcCcCCCCCCCHHHHHHHHHcCCCc
Confidence 5788987654 23333334443332235555555443468888889999998765
No 180
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=73.92 E-value=10 Score=28.37 Aligned_cols=54 Identities=7% Similarity=0.025 Sum_probs=38.7
Q ss_pred CCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCC----CCHHHH----HHHHhcCCeEE
Q psy4411 39 NGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLG----MPESIQ----EFVASKGKQQE 95 (99)
Q Consensus 39 ~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~----~~~~~~----~~a~~~g~~~~ 95 (99)
.+++++++|.+. +.-.++..++++|.+++++.+.... +++++. +.+++.|+++.
T Consensus 146 ~~~~vvViGgG~---~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~d~~~~~~l~~~l~~~GV~i~ 207 (452)
T 3oc4_A 146 NSQTVAVIGAGP---IGMEAIDFLVKMKKTVHVFESLENLLPKYFDKEMVAEVQKSLEKQAVIFH 207 (452)
T ss_dssp TCSEEEEECCSH---HHHHHHHHHHHTTCEEEEEESSSSSSTTTCCHHHHHHHHHHHHTTTEEEE
T ss_pred cCCEEEEECCCH---HHHHHHHHHHhCCCeEEEEEccCccccccCCHHHHHHHHHHHHHcCCEEE
Confidence 357899999754 7888889999999999999764332 355543 34556776654
No 181
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=73.82 E-value=4 Score=30.30 Aligned_cols=36 Identities=19% Similarity=0.189 Sum_probs=31.6
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPP 75 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~ 75 (99)
.+.|++++++|=+ ++.+..+..+.-|||++....|.
T Consensus 138 ~l~g~tvGIiG~G---~IG~~va~~~~~fg~~v~~~d~~ 173 (334)
T 3kb6_A 138 ELNRLTLGVIGTG---RIGSRVAMYGLAFGMKVLCYDVV 173 (334)
T ss_dssp CGGGSEEEEECCS---HHHHHHHHHHHHTTCEEEEECSS
T ss_pred eecCcEEEEECcc---hHHHHHHHhhcccCceeeecCCc
Confidence 4789999999975 49999999999999999988873
No 182
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=73.73 E-value=8.7 Score=27.14 Aligned_cols=54 Identities=11% Similarity=0.147 Sum_probs=38.4
Q ss_pred CCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCC-CCCCHHHHHHH-HhcCCeE
Q psy4411 38 VNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPN-LGMPESIQEFV-ASKGKQQ 94 (99)
Q Consensus 38 l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~-~~~~~~~~~~a-~~~g~~~ 94 (99)
..+++|+++|.+. ++-.++..++.+|.+++++.+.. +.+.+.+.+.+ ++.|+++
T Consensus 153 ~~~~~v~ViG~G~---~g~e~a~~l~~~g~~V~l~~~~~~~~~~~~~~~~~~~~~gV~v 208 (335)
T 2a87_A 153 FRDQDIAVIGGGD---SAMEEATFLTRFARSVTLVHRRDEFRASKIMLDRARNNDKIRF 208 (335)
T ss_dssp GTTCEEEEECSSH---HHHHHHHHHTTTCSEEEEECSSSSCSSCTTHHHHHHHCTTEEE
T ss_pred cCCCEEEEECCCH---HHHHHHHHHHHhCCeEEEEEcCCcCCccHHHHHHHhccCCcEE
Confidence 3578999999754 77888888899999999998754 33444454443 4566554
No 183
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=73.68 E-value=6.1 Score=29.16 Aligned_cols=36 Identities=19% Similarity=0.215 Sum_probs=31.0
Q ss_pred CCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCC
Q psy4411 38 VNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPN 76 (99)
Q Consensus 38 l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~ 76 (99)
+.+++|+++|-+. ..+.++..+.++|.+++++.|..
T Consensus 10 ~~~~~IlIlG~G~---lg~~la~aa~~lG~~viv~d~~~ 45 (377)
T 3orq_A 10 KFGATIGIIGGGQ---LGKMMAQSAQKMGYKVVVLDPSE 45 (377)
T ss_dssp CTTCEEEEECCSH---HHHHHHHHHHHTTCEEEEEESCT
T ss_pred CCCCEEEEECCCH---HHHHHHHHHHHCCCEEEEEECCC
Confidence 5688999999754 78999999999999999998743
No 184
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=73.59 E-value=14 Score=29.07 Aligned_cols=60 Identities=15% Similarity=0.146 Sum_probs=45.6
Q ss_pred HHHhc---CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHh-cCCe
Q psy4411 32 KEEMG---RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVAS-KGKQ 93 (99)
Q Consensus 32 ~e~~g---~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~-~g~~ 93 (99)
+|+|+ .|+|.+|+-+=...- -.--|++.+..+|++|+.++..-|...+++.+.+.+ .|+.
T Consensus 35 ~~~~~~~~pl~g~ri~~~lh~~~--~ta~l~~tL~~~Ga~v~~~~~n~~stqd~~aaal~~~~gi~ 98 (479)
T 1v8b_A 35 REEYGKDQPLKNAKITGCLHMTV--ECALLIETLQKLGAQIRWCSCNIYSTADYAAAAVSTLENVT 98 (479)
T ss_dssp HHHSTTTCTTTTCEEEEESCCSH--HHHHHHHHHHHTTCEEEEECSSSSCCCHHHHHHHTTSTTEE
T ss_pred HHHhhccCCCCCCEEEEEeccHH--HHHHHHHHHHHCCCEEEEecCCCCCchHHHHHHHhhcCCce
Confidence 56654 599999997766542 334577788889999999999999888888777766 5654
No 185
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=73.51 E-value=4.7 Score=31.08 Aligned_cols=50 Identities=16% Similarity=0.034 Sum_probs=37.8
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCeE
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQQ 94 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~ 94 (99)
.+.+.||+++|-+ ++....+..+..+|++|+++-+. ++..+++++.|.++
T Consensus 187 ~v~~~kV~ViG~G---~iG~~aa~~a~~lGa~V~v~D~~-----~~~l~~~~~~G~~~ 236 (405)
T 4dio_A 187 TVPAAKIFVMGAG---VAGLQAIATARRLGAVVSATDVR-----PAAKEQVASLGAKF 236 (405)
T ss_dssp EECCCEEEEECCS---HHHHHHHHHHHHTTCEEEEECSS-----TTHHHHHHHTTCEE
T ss_pred CcCCCEEEEECCc---HHHHHHHHHHHHCCCEEEEEcCC-----HHHHHHHHHcCCce
Confidence 4678999999985 49999999999999998765543 33456666666653
No 186
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=73.47 E-value=18 Score=24.66 Aligned_cols=52 Identities=15% Similarity=0.180 Sum_probs=36.1
Q ss_pred CCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCeE
Q psy4411 38 VNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQQ 94 (99)
Q Consensus 38 l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~ 94 (99)
++|+++.+.|-.. .+.+.++..++..|.+|++..-.. ++...+.+++.|.++
T Consensus 2 l~~k~vlVTGas~--giG~~ia~~l~~~G~~V~~~~r~~---~~~~~~~l~~~~~~~ 53 (255)
T 2q2v_A 2 LKGKTALVTGSTS--GIGLGIAQVLARAGANIVLNGFGD---PAPALAEIARHGVKA 53 (255)
T ss_dssp CTTCEEEESSCSS--HHHHHHHHHHHHTTCEEEEECSSC---CHHHHHHHHTTSCCE
T ss_pred CCCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCc---hHHHHHHHHhcCCce
Confidence 6788888888755 499999999999999998876422 134444444444433
No 187
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=73.31 E-value=12 Score=28.48 Aligned_cols=53 Identities=13% Similarity=0.099 Sum_probs=38.8
Q ss_pred CcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCC---CCCHHH----HHHHHhcCCeEE
Q psy4411 40 GLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNL---GMPESI----QEFVASKGKQQE 95 (99)
Q Consensus 40 g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~---~~~~~~----~~~a~~~g~~~~ 95 (99)
+++++++|.+. +.--++..++.+|.+|+++.+... .+++++ .+.+++.|+++.
T Consensus 176 ~~~vvViGgG~---ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~gv~i~ 235 (500)
T 1onf_A 176 SKKIGIVGSGY---IAVELINVIKRLGIDSYIFARGNRILRKFDESVINVLENDMKKNNINIV 235 (500)
T ss_dssp CSEEEEECCSH---HHHHHHHHHHTTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEE
T ss_pred CCeEEEECChH---HHHHHHHHHHHcCCeEEEEecCCccCcccchhhHHHHHHHHHhCCCEEE
Confidence 68999999864 888888899999999999987432 134544 344567777654
No 188
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=73.23 E-value=14 Score=28.33 Aligned_cols=56 Identities=13% Similarity=0.097 Sum_probs=40.0
Q ss_pred CCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCC---CCHHH----HHHHHhcCCeEEE
Q psy4411 38 VNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLG---MPESI----QEFVASKGKQQEV 96 (99)
Q Consensus 38 l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~---~~~~~----~~~a~~~g~~~~~ 96 (99)
..+++++++|.+. ++-.++..++.+|.+|+++.+.... +++++ .+.+++.|+++..
T Consensus 149 ~~~~~vvViGgG~---~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~ 211 (565)
T 3ntd_A 149 NNVEHATVVGGGF---IGLEMMESLHHLGIKTTLLELADQVMTPVDREMAGFAHQAIRDQGVDLRL 211 (565)
T ss_dssp TTCSEEEEECCSH---HHHHHHHHHHHTTCEEEEEESSSSSCTTSCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCEEEEECCCH---HHHHHHHHHHhcCCcEEEEEcCCccchhcCHHHHHHHHHHHHHCCCEEEe
Confidence 3467999999865 8888888999999999999764332 23443 3446677877643
No 189
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=73.17 E-value=7.7 Score=25.19 Aligned_cols=49 Identities=12% Similarity=-0.021 Sum_probs=36.1
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhC-CCEEEEECCCCCCCCHHHHHHHHhcCCe
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLY-DVKLNYVSPPNLGMPESIQEFVASKGKQ 93 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~-G~~v~~~~P~~~~~~~~~~~~a~~~g~~ 93 (99)
.+.+.+|+++|-+ ++...++..+... |.+|+++-. +++-.+.+++.|..
T Consensus 36 ~~~~~~v~IiG~G---~~G~~~a~~L~~~~g~~V~vid~-----~~~~~~~~~~~g~~ 85 (183)
T 3c85_A 36 NPGHAQVLILGMG---RIGTGAYDELRARYGKISLGIEI-----REEAAQQHRSEGRN 85 (183)
T ss_dssp CCTTCSEEEECCS---HHHHHHHHHHHHHHCSCEEEEES-----CHHHHHHHHHTTCC
T ss_pred CCCCCcEEEECCC---HHHHHHHHHHHhccCCeEEEEEC-----CHHHHHHHHHCCCC
Confidence 3567799999953 5999999999998 999988754 34445555555554
No 190
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=73.14 E-value=5.3 Score=27.74 Aligned_cols=36 Identities=19% Similarity=0.190 Sum_probs=30.9
Q ss_pred cCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEEC
Q psy4411 36 GRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVS 73 (99)
Q Consensus 36 g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~ 73 (99)
.+++|+++.+.|-.. -+.+.++..++.-|.+|+++.
T Consensus 7 ~~l~~k~vlVTGas~--GIG~aia~~la~~G~~V~~~~ 42 (262)
T 3ksu_A 7 HDLKNKVIVIAGGIK--NLGALTAKTFALESVNLVLHY 42 (262)
T ss_dssp SCCTTCEEEEETCSS--HHHHHHHHHHTTSSCEEEEEE
T ss_pred cCCCCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEe
Confidence 468899999999765 499999999999999999874
No 191
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=73.14 E-value=4.3 Score=31.82 Aligned_cols=35 Identities=9% Similarity=0.125 Sum_probs=31.1
Q ss_pred cCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEEC
Q psy4411 36 GRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVS 73 (99)
Q Consensus 36 g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~ 73 (99)
.+++|+||++-|-+| |...++..+..+|++++.++
T Consensus 231 ~~l~Gk~vaVQG~Gn---VG~~aa~~L~e~GakvVavs 265 (450)
T 4fcc_A 231 MGFEGMRVSVSGSGN---VAQYAIEKAMEFGARVITAS 265 (450)
T ss_dssp CCSTTCEEEEECCSH---HHHHHHHHHHHTTCEEEEEE
T ss_pred CCcCCCEEEEeCCCh---HHHHHHHHHHhcCCeEEEEe
Confidence 369999999999865 99999999999999998765
No 192
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=73.05 E-value=15 Score=25.27 Aligned_cols=57 Identities=7% Similarity=0.001 Sum_probs=39.5
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCeEEE
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQQEV 96 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~~~ 96 (99)
+++|+++.+.|-..- +.+.++..++.-|.+|+++.-..- -.++..+.+++.|.++..
T Consensus 4 ~~~~k~vlVTGas~G--IG~aia~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~ 60 (252)
T 3h7a_A 4 TPRNATVAVIGAGDY--IGAEIAKKFAAEGFTVFAGRRNGE-KLAPLVAEIEAAGGRIVA 60 (252)
T ss_dssp -CCSCEEEEECCSSH--HHHHHHHHHHHTTCEEEEEESSGG-GGHHHHHHHHHTTCEEEE
T ss_pred CCCCCEEEEECCCch--HHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcCCeEEE
Confidence 467889999998654 999999999999999998875221 123344455555555543
No 193
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=72.82 E-value=14 Score=28.68 Aligned_cols=55 Identities=11% Similarity=0.045 Sum_probs=39.7
Q ss_pred CCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCC---CCHHH----HHHHHhcCCeEE
Q psy4411 38 VNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLG---MPESI----QEFVASKGKQQE 95 (99)
Q Consensus 38 l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~---~~~~~----~~~a~~~g~~~~ 95 (99)
..+++++++|.+. +.-.++..++.+|.+++++.+.... +++++ .+.+++.|+++.
T Consensus 185 ~~~~~vvViGgG~---~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~ 246 (588)
T 3ics_A 185 KKPRHATVIGGGF---IGVEMVENLRERGIEVTLVEMANQVMPPIDYEMAAYVHEHMKNHDVELV 246 (588)
T ss_dssp HCCSEEEEECCSH---HHHHHHHHHHHTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEE
T ss_pred cCCCeEEEECCCH---HHHHHHHHHHhCCCeEEEEecCCcccccCCHHHHHHHHHHHHHcCCEEE
Confidence 3578999999754 7888888999999999999874432 23443 344567787764
No 194
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=72.80 E-value=7.6 Score=27.17 Aligned_cols=35 Identities=17% Similarity=0.198 Sum_probs=30.5
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEEC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVS 73 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~ 73 (99)
+++|+++.+.|-.. -+.+.++..++.-|.+|.++.
T Consensus 28 ~l~gk~~lVTGas~--GIG~aia~~la~~G~~V~~~~ 62 (271)
T 3v2g_A 28 SLAGKTAFVTGGSR--GIGAAIAKRLALEGAAVALTY 62 (271)
T ss_dssp CCTTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEe
Confidence 58899999999765 499999999999999998874
No 195
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=72.79 E-value=21 Score=27.98 Aligned_cols=57 Identities=14% Similarity=0.135 Sum_probs=43.6
Q ss_pred HHHhc---CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhc
Q psy4411 32 KEEMG---RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASK 90 (99)
Q Consensus 32 ~e~~g---~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~ 90 (99)
+|+|+ .|+|.+|+-+=...- -.--|++.+..+|++|+.++..-|...+++.+.+.+.
T Consensus 49 ~~~~~~~~pl~g~~i~~~~h~~~--~ta~l~~~l~~~ga~v~~~~~n~~stqd~~aaa~~~~ 108 (494)
T 3ce6_A 49 RREYAEVQPLKGARISGSLHMTV--QTAVLIETLTALGAEVRWASCNIFSTQDHAAAAVVVG 108 (494)
T ss_dssp HHHHTTTCTTTTCEEEEESCCSH--HHHHHHHHHHHTTCEEEEECSSTTCCCHHHHHHHHHC
T ss_pred HHHhhccCCCCCCEEEEEeecHH--HHHHHHHHHHHCCCeEEEeecCCCCchHHHHHHHhhh
Confidence 55554 599999997766442 2335778888899999999999998888887766555
No 196
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=72.76 E-value=5 Score=30.89 Aligned_cols=38 Identities=26% Similarity=0.365 Sum_probs=32.0
Q ss_pred Hhc-C-CCCcEEEEECCCCCchhHHHHHHHHhh-CCCEEEEECC
Q psy4411 34 EMG-R-VNGLTITMVGDLKNGRTVHSLARLLTL-YDVKLNYVSP 74 (99)
Q Consensus 34 ~~g-~-l~g~~i~~vGd~~n~rv~~Sl~~~~~~-~G~~v~~~~P 74 (99)
++| + ++|+|++++|=++ |.+..+..+.. ||++++.++.
T Consensus 204 ~~G~~~l~gktvgI~G~G~---VG~~vA~~l~~~~G~kVv~~sD 244 (419)
T 1gtm_A 204 VLGWDTLKGKTIAIQGYGN---AGYYLAKIMSEDFGMKVVAVSD 244 (419)
T ss_dssp HTTCSCSTTCEEEEECCSH---HHHHHHHHHHHTTCCEEEEEEC
T ss_pred HhCCcccCCCEEEEEcCCH---HHHHHHHHHHHhcCCEEEEEeC
Confidence 345 5 8999999999743 99999999999 9999998853
No 197
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=72.74 E-value=14 Score=27.03 Aligned_cols=54 Identities=9% Similarity=0.052 Sum_probs=38.9
Q ss_pred CCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCC----CCHHHH----HHHHhcCCeEE
Q psy4411 39 NGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLG----MPESIQ----EFVASKGKQQE 95 (99)
Q Consensus 39 ~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~----~~~~~~----~~a~~~g~~~~ 95 (99)
.+++++++|.+. +.-.++..++++|.+++++.+.... .++++. +.+++.|+++.
T Consensus 141 ~~~~vvViGgG~---~g~e~A~~l~~~g~~Vtvv~~~~~~~~~~~~~~~~~~l~~~l~~~GV~i~ 202 (404)
T 3fg2_P 141 DKKHVVVIGAGF---IGLEFAATARAKGLEVDVVELAPRVMARVVTPEISSYFHDRHSGAGIRMH 202 (404)
T ss_dssp GCSEEEEECCSH---HHHHHHHHHHHTTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHHTTCEEE
T ss_pred cCCeEEEECCCH---HHHHHHHHHHhCCCEEEEEeCCCcchhhccCHHHHHHHHHHHHhCCcEEE
Confidence 478999999864 7778888888999999999875432 344443 44567787764
No 198
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=72.74 E-value=4.8 Score=27.89 Aligned_cols=37 Identities=14% Similarity=0.117 Sum_probs=28.3
Q ss_pred hcCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 35 MGRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 35 ~g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
..++.+.||+++|-++ +..+++..+++.|.+|++...
T Consensus 14 ~~~~~~~kIgiIG~G~---mG~alA~~L~~~G~~V~~~~r 50 (245)
T 3dtt_A 14 NLYFQGMKIAVLGTGT---VGRTMAGALADLGHEVTIGTR 50 (245)
T ss_dssp -----CCEEEEECCSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred ccccCCCeEEEECCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 4568899999999654 999999999999999988765
No 199
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=72.54 E-value=5.6 Score=27.77 Aligned_cols=36 Identities=11% Similarity=0.033 Sum_probs=30.4
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
+++|+++.+.|-.. -+.+.++..++..|.+|.+..-
T Consensus 25 ~l~~k~vlVTGas~--gIG~aia~~la~~G~~V~~~~~ 60 (269)
T 4dmm_A 25 PLTDRIALVTGASR--GIGRAIALELAAAGAKVAVNYA 60 (269)
T ss_dssp TTTTCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEeC
Confidence 57889999999765 4999999999999999988653
No 200
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=72.38 E-value=11 Score=29.47 Aligned_cols=35 Identities=9% Similarity=0.004 Sum_probs=30.7
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
.+.|++++++|-+. +.+..+..+..||++|.++-+
T Consensus 217 ~L~GktV~ViG~G~---IGk~vA~~Lra~Ga~Viv~D~ 251 (435)
T 3gvp_A 217 MFGGKQVVVCGYGE---VGKGCCAALKAMGSIVYVTEI 251 (435)
T ss_dssp CCTTCEEEEECCSH---HHHHHHHHHHHTTCEEEEECS
T ss_pred eecCCEEEEEeeCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 58999999999864 999999999999999887654
No 201
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=72.29 E-value=12 Score=23.01 Aligned_cols=47 Identities=19% Similarity=0.171 Sum_probs=34.3
Q ss_pred CCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCe
Q psy4411 39 NGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQ 93 (99)
Q Consensus 39 ~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~ 93 (99)
++.+|+++|-+ ++.++++..+...|.+|+++-. +++..+.+++.|..
T Consensus 5 ~~~~v~I~G~G---~iG~~la~~L~~~g~~V~~id~-----~~~~~~~~~~~~~~ 51 (141)
T 3llv_A 5 GRYEYIVIGSE---AAGVGLVRELTAAGKKVLAVDK-----SKEKIELLEDEGFD 51 (141)
T ss_dssp -CCSEEEECCS---HHHHHHHHHHHHTTCCEEEEES-----CHHHHHHHHHTTCE
T ss_pred CCCEEEEECCC---HHHHHHHHHHHHCCCeEEEEEC-----CHHHHHHHHHCCCc
Confidence 45689999973 5999999999999999988764 44555555555543
No 202
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=72.23 E-value=7.3 Score=27.49 Aligned_cols=42 Identities=14% Similarity=0.170 Sum_probs=32.6
Q ss_pred hhHHHHHHHHhhCCCEEEEEC-------CCCCCCCHHHHHHHHhcCCeEEE
Q psy4411 53 RTVHSLARLLTLYDVKLNYVS-------PPNLGMPESIQEFVASKGKQQEV 96 (99)
Q Consensus 53 rv~~Sl~~~~~~~G~~v~~~~-------P~~~~~~~~~~~~a~~~g~~~~~ 96 (99)
.++.-++..+ -|+++++++ |..++++++..++++++|+++-.
T Consensus 55 ~TA~k~~e~~--~~i~lVvVTh~~GF~~pg~~e~~~e~~~~L~~~G~~V~t 103 (201)
T 1vp8_A 55 DTAMKALEMA--EGLEVVVVTYHTGFVREGENTMPPEVEEELRKRGAKIVR 103 (201)
T ss_dssp HHHHHHHHHC--TTCEEEEEECCTTSSSTTCCSSCHHHHHHHHHTTCEEEE
T ss_pred hHHHHHHHHh--cCCeEEEEeCcCCCCCCCCCcCCHHHHHHHHhCCCEEEE
Confidence 3666555543 478888888 77888999999999999988743
No 203
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=71.98 E-value=14 Score=27.96 Aligned_cols=55 Identities=11% Similarity=0.119 Sum_probs=39.4
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCeEE
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQQE 95 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~~ 95 (99)
.+++++|.++|=+. ...|.+..+...|.+|+..=...... +...+.+++.|+.+.
T Consensus 6 ~~~~k~v~viG~G~---sG~s~A~~l~~~G~~V~~~D~~~~~~-~~~~~~L~~~gi~~~ 60 (451)
T 3lk7_A 6 TFENKKVLVLGLAR---SGEAAARLLAKLGAIVTVNDGKPFDE-NPTAQSLLEEGIKVV 60 (451)
T ss_dssp TTTTCEEEEECCTT---THHHHHHHHHHTTCEEEEEESSCGGG-CHHHHHHHHTTCEEE
T ss_pred hcCCCEEEEEeeCH---HHHHHHHHHHhCCCEEEEEeCCcccC-ChHHHHHHhCCCEEE
Confidence 47889999999865 56678999999999998864433222 234566777787664
No 204
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=71.96 E-value=16 Score=26.76 Aligned_cols=54 Identities=13% Similarity=0.093 Sum_probs=39.1
Q ss_pred CcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCC----CCHHHH----HHHHhcCCeEEE
Q psy4411 40 GLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLG----MPESIQ----EFVASKGKQQEV 96 (99)
Q Consensus 40 g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~----~~~~~~----~~a~~~g~~~~~ 96 (99)
+++++++|.+. +.-.++..+.++|.+++++.+.... .++++. +.+++.|+++..
T Consensus 152 ~~~vvViGgG~---~g~e~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~ 213 (415)
T 3lxd_A 152 AKNAVVIGGGY---IGLEAAAVLTKFGVNVTLLEALPRVLARVAGEALSEFYQAEHRAHGVDLRT 213 (415)
T ss_dssp CCEEEEECCSH---HHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCeEEEECCCH---HHHHHHHHHHhcCCeEEEEecCCchhhhhcCHHHHHHHHHHHHhCCCEEEE
Confidence 78999999754 7778888889999999999875432 344443 445677877653
No 205
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=71.89 E-value=9.7 Score=28.36 Aligned_cols=36 Identities=6% Similarity=-0.162 Sum_probs=30.4
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPP 75 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~ 75 (99)
.+.+.+|+++|-+ ++....+..+..+|++|+++-+.
T Consensus 169 ~l~g~~V~ViGaG---~iG~~aa~~a~~~Ga~V~~~d~~ 204 (384)
T 1l7d_A 169 TVPPARVLVFGVG---VAGLQAIATAKRLGAVVMATDVR 204 (384)
T ss_dssp EECCCEEEEECCS---HHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCCCCEEEEECCC---HHHHHHHHHHHHCCCEEEEEeCC
Confidence 5789999999964 49999999999999997777653
No 206
>1jl3_A Arsenate reductase; alpha-beta fold, PTP-loop, oxidoreductase; 1.60A {Bacillus subtilis} SCOP: c.44.1.1 PDB: 1z2d_A 1z2e_A 2ipa_B
Probab=71.87 E-value=9.9 Score=24.31 Aligned_cols=54 Identities=9% Similarity=0.001 Sum_probs=32.7
Q ss_pred cEEEEECCCC--CchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCeE
Q psy4411 41 LTITMVGDLK--NGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQQ 94 (99)
Q Consensus 41 ~~i~~vGd~~--n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~ 94 (99)
++|.||.-+| .|+++-.++.-...-...+.-++-....+++..++.+++.|+++
T Consensus 4 ~~VLFVC~gN~cRSpmAEai~~~~~~~~~~v~SAGt~~~~~~p~a~~~l~~~Gid~ 59 (139)
T 1jl3_A 4 KIIYFLCTGNSCRSQMAEGWAKQYLGDEWKVYSAGIEAHGLNPNAVKAMKEVGIDI 59 (139)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHSCTTEEEEEEESSCCCCCHHHHHHHHHTTCCC
T ss_pred CeEEEEcCCchHHHHHHHHHHHHhCCCCEEEEcCcCCCCCCCHHHHHHHHHcCCCc
Confidence 5788987654 23333334443332224555555444468888889999998765
No 207
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=71.84 E-value=14 Score=29.09 Aligned_cols=35 Identities=11% Similarity=0.013 Sum_probs=31.2
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
.+.|++++++|-+ .+.++.+..++.+|++|.++.+
T Consensus 262 ~L~GKtVvVtGaG---gIG~aiA~~Laa~GA~Viv~D~ 296 (488)
T 3ond_A 262 MIAGKVAVVAGYG---DVGKGCAAALKQAGARVIVTEI 296 (488)
T ss_dssp CCTTCEEEEECCS---HHHHHHHHHHHHTTCEEEEECS
T ss_pred cccCCEEEEECCC---HHHHHHHHHHHHCCCEEEEEcC
Confidence 4899999999975 4999999999999999988765
No 208
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=71.78 E-value=15 Score=26.33 Aligned_cols=48 Identities=19% Similarity=0.084 Sum_probs=35.5
Q ss_pred CCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCe
Q psy4411 38 VNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQ 93 (99)
Q Consensus 38 l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~ 93 (99)
.+..+|+++|-++ +...++..+++.|.+|++.. .+++-.+.+.+.|+.
T Consensus 29 ~~~~~I~iIG~G~---mG~~~a~~l~~~G~~V~~~d-----r~~~~~~~l~~~g~~ 76 (320)
T 4dll_A 29 PYARKITFLGTGS---MGLPMARRLCEAGYALQVWN-----RTPARAASLAALGAT 76 (320)
T ss_dssp CCCSEEEEECCTT---THHHHHHHHHHTTCEEEEEC-----SCHHHHHHHHTTTCE
T ss_pred cCCCEEEEECccH---HHHHHHHHHHhCCCeEEEEc-----CCHHHHHHHHHCCCE
Confidence 4556999999865 89999999999999988764 445555555555543
No 209
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=71.60 E-value=5.7 Score=27.43 Aligned_cols=57 Identities=11% Similarity=0.113 Sum_probs=36.0
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCeEE
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQQE 95 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~~ 95 (99)
.+.++++.+.|-.. -+.+.++..+++.|.++.+..-..-...++..+.+++.+.+++
T Consensus 23 ~l~~k~vlVTGas~--gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~ 79 (267)
T 4iiu_A 23 NAMSRSVLVTGASK--GIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGR 79 (267)
T ss_dssp --CCCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEE
T ss_pred ccCCCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceE
Confidence 47888999999755 4999999999999999977543221111233334444444443
No 210
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=71.52 E-value=16 Score=27.42 Aligned_cols=54 Identities=6% Similarity=-0.024 Sum_probs=38.9
Q ss_pred CCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCC---CCHHHH----HHHHhcCCeEE
Q psy4411 39 NGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLG---MPESIQ----EFVASKGKQQE 95 (99)
Q Consensus 39 ~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~---~~~~~~----~~a~~~g~~~~ 95 (99)
.+++++++|.+. +.-.++..++++|.+|+++.+...- .++++. +.+++.|+++.
T Consensus 168 ~~~~vvViGgG~---~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gV~i~ 228 (464)
T 2eq6_A 168 LPKRLLVIGGGA---VGLELGQVYRRLGAEVTLIEYMPEILPQGDPETAALLRRALEKEGIRVR 228 (464)
T ss_dssp CCSEEEEECCSH---HHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEE
T ss_pred cCCEEEEECCCH---HHHHHHHHHHHCCCeEEEEEcCCccccccCHHHHHHHHHHHHhcCCEEE
Confidence 358999999754 8888899999999999999874322 344443 44567777653
No 211
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=71.50 E-value=11 Score=28.98 Aligned_cols=38 Identities=21% Similarity=0.156 Sum_probs=30.8
Q ss_pred HHhc-CCCCcEEEEECCCCCchhHHHHHHHHhh-CCCEEEEEC
Q psy4411 33 EEMG-RVNGLTITMVGDLKNGRTVHSLARLLTL-YDVKLNYVS 73 (99)
Q Consensus 33 e~~g-~l~g~~i~~vGd~~n~rv~~Sl~~~~~~-~G~~v~~~~ 73 (99)
+++| +++|++|++.|-++ |....+..+.. .|++++-++
T Consensus 201 ~~~g~~l~g~~vaVqG~Gn---VG~~~a~~L~e~~GakvVavs 240 (415)
T 2tmg_A 201 DVLGIDPKKATVAVQGFGN---VGQFAALLISQELGSKVVAVS 240 (415)
T ss_dssp HHTTCCTTTCEEEEECCSH---HHHHHHHHHHHTTCCEEEEEE
T ss_pred HHcCCCcCCCEEEEECCcH---HHHHHHHHHHHhcCCEEEEEE
Confidence 3345 59999999999743 99999988888 999998544
No 212
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=71.16 E-value=14 Score=29.05 Aligned_cols=35 Identities=11% Similarity=0.031 Sum_probs=30.8
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
.+.|++++++|-+. +.+..+..+.-||++|.++-+
T Consensus 244 ~L~GKTVgVIG~G~---IGr~vA~~lrafGa~Viv~d~ 278 (464)
T 3n58_A 244 MMAGKVAVVCGYGD---VGKGSAQSLAGAGARVKVTEV 278 (464)
T ss_dssp CCTTCEEEEECCSH---HHHHHHHHHHHTTCEEEEECS
T ss_pred cccCCEEEEECcCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 59999999999753 999999999999999988743
No 213
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=71.02 E-value=5.9 Score=25.28 Aligned_cols=22 Identities=9% Similarity=-0.114 Sum_probs=15.0
Q ss_pred CCCCHHHHHHHHhcCCeEEEEe
Q psy4411 77 LGMPESIQEFVASKGKQQEVYE 98 (99)
Q Consensus 77 ~~~~~~~~~~a~~~g~~~~~~~ 98 (99)
..+..++++.+.+.|+++-.|.
T Consensus 74 ~~~~~~ll~~~~~~Gv~v~vC~ 95 (134)
T 3mc3_A 74 GNPFIHFFDMAXENGVXMYVCV 95 (134)
T ss_dssp CCHHHHHHHHHHHTTCEEEEEH
T ss_pred CCCHHHHHHHHHHcCCcEEEcH
Confidence 3344567777888888887663
No 214
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=70.86 E-value=17 Score=27.12 Aligned_cols=54 Identities=13% Similarity=0.054 Sum_probs=38.5
Q ss_pred CCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCC---CCHHH----HHHHHhcCCeEE
Q psy4411 39 NGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLG---MPESI----QEFVASKGKQQE 95 (99)
Q Consensus 39 ~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~---~~~~~----~~~a~~~g~~~~ 95 (99)
.+++++++|.+. +.--++..++.+|.+|+++.+...- +++++ .+.+++.|+++.
T Consensus 170 ~~~~vvViGgG~---~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~ 230 (464)
T 2a8x_A 170 LPKSIIIAGAGA---IGMEFGYVLKNYGVDVTIVEFLPRALPNEDADVSKEIEKQFKKLGVTIL 230 (464)
T ss_dssp CCSEEEEECCSH---HHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEE
T ss_pred cCCeEEEECCcH---HHHHHHHHHHHcCCeEEEEEcCCccccccCHHHHHHHHHHHHHcCCEEE
Confidence 357999999754 7888888899999999999874322 34544 344566676653
No 215
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=70.77 E-value=6 Score=29.78 Aligned_cols=37 Identities=19% Similarity=0.217 Sum_probs=32.0
Q ss_pred hcCCCCcEEEEECCCCCchhHHHHHHHHhhCCC-EEEEECC
Q psy4411 35 MGRVNGLTITMVGDLKNGRTVHSLARLLTLYDV-KLNYVSP 74 (99)
Q Consensus 35 ~g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~-~v~~~~P 74 (99)
++++.|.+|+++|-+ .+.+..+..+..+|+ +++++.+
T Consensus 162 ~~~l~g~~VlIiGaG---~iG~~~a~~l~~~G~~~V~v~~r 199 (404)
T 1gpj_A 162 LGSLHDKTVLVVGAG---EMGKTVAKSLVDRGVRAVLVANR 199 (404)
T ss_dssp HSCCTTCEEEEESCC---HHHHHHHHHHHHHCCSEEEEECS
T ss_pred hccccCCEEEEEChH---HHHHHHHHHHHHCCCCEEEEEeC
Confidence 457899999999974 499999999999998 8988876
No 216
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=70.51 E-value=7 Score=28.95 Aligned_cols=53 Identities=8% Similarity=-0.113 Sum_probs=38.5
Q ss_pred CcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCC----CCHHH----HHHHHhcCCeEE
Q psy4411 40 GLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLG----MPESI----QEFVASKGKQQE 95 (99)
Q Consensus 40 g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~----~~~~~----~~~a~~~g~~~~ 95 (99)
+++++++|.+. +.-.++..+++.|.+|+++.+.... +++++ .+.+++.|+++.
T Consensus 146 ~~~vvVIGgG~---~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~~~ 206 (385)
T 3klj_A 146 KGKAFIIGGGI---LGIELAQAIIDSGTPASIGIILEYPLERQLDRDGGLFLKDKLDRLGIKIY 206 (385)
T ss_dssp HSCEEEECCSH---HHHHHHHHHHHHTCCEEEECSSSSSCTTTSCHHHHHHHHHHHHTTTCEEE
T ss_pred CCeEEEECCCH---HHHHHHHHHHhCCCeEEEEEcCCccchhhcCHHHHHHHHHHHHhCCCEEE
Confidence 67899999765 7778888888999999999875432 34444 344567787764
No 217
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=70.37 E-value=25 Score=27.62 Aligned_cols=60 Identities=12% Similarity=0.148 Sum_probs=42.4
Q ss_pred HHHhc---CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCe
Q psy4411 32 KEEMG---RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQ 93 (99)
Q Consensus 32 ~e~~g---~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~ 93 (99)
+|+|+ .|+|.+|+.+=...- =.--|++.+..+|++|+.++.+-|.-.++..+.+.+.|+.
T Consensus 64 ~~~~~~~~pl~G~ri~~~lh~~~--~ta~li~tL~~~GA~V~~~~~n~~stqd~~aaal~~~gi~ 126 (494)
T 3d64_A 64 RDEYKAQQPLKGARIAGSLHMTI--QTGVLIETLKALGADVRWASCNIFSTQDHAAAAIVEAGTP 126 (494)
T ss_dssp HHHTTTTCTTTTCEEEEESCCSH--HHHHHHHHHHHTTCEEEEECSSSSCCCHHHHHHHHHTTCC
T ss_pred HHHHhccCCCCCCEEEEEeCCcH--HHHHHHHHHHhCCCEEEEEecCCcccchHHHHHHHhCCce
Confidence 55654 599999998533221 2235778888899999999998887778876665556653
No 218
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=70.28 E-value=14 Score=27.66 Aligned_cols=53 Identities=15% Similarity=0.112 Sum_probs=38.6
Q ss_pred CcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCC---CCCHHH----HHHHHhcCCeEE
Q psy4411 40 GLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNL---GMPESI----QEFVASKGKQQE 95 (99)
Q Consensus 40 g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~---~~~~~~----~~~a~~~g~~~~ 95 (99)
+++++++|.+. +.-.++..++++|.+++++.+... .+++++ .+.+++.|+++.
T Consensus 167 ~~~vvViGgG~---~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~ 226 (450)
T 1ges_A 167 PERVAVVGAGY---IGVELGGVINGLGAKTHLFEMFDAPLPSFDPMISETLVEVMNAEGPQLH 226 (450)
T ss_dssp CSEEEEECCSH---HHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHSCEEE
T ss_pred CCeEEEECCCH---HHHHHHHHHHhcCCEEEEEEeCCchhhhhhHHHHHHHHHHHHHCCCEEE
Confidence 57999999764 888899999999999999987532 234544 344566676653
No 219
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=70.25 E-value=9 Score=29.53 Aligned_cols=54 Identities=15% Similarity=0.094 Sum_probs=38.5
Q ss_pred CCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCC-CCCCHHHHHHHHh-cCCeE
Q psy4411 38 VNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPN-LGMPESIQEFVAS-KGKQQ 94 (99)
Q Consensus 38 l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~-~~~~~~~~~~a~~-~g~~~ 94 (99)
..+++|+++|.++ ++--++..++.+|.+|+++.+.. +..++.+.+.+++ .|+++
T Consensus 353 ~~~k~V~ViGgG~---~g~E~A~~L~~~g~~Vtlv~~~~~l~~~~~l~~~l~~~~gV~v 408 (521)
T 1hyu_A 353 FKGKRVAVIGGGN---SGVEAAIDLAGIVEHVTLLEFAPEMKADQVLQDKVRSLKNVDI 408 (521)
T ss_dssp GBTSEEEEECCSH---HHHHHHHHHHHHBSEEEEECSSSSCCSCHHHHHHHTTCTTEEE
T ss_pred cCCCeEEEECCCH---HHHHHHHHHHhhCCEEEEEEeCcccCcCHHHHHHHhcCCCcEE
Confidence 4578999999864 77777888888899999998743 3344555566665 45444
No 220
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=70.10 E-value=22 Score=24.80 Aligned_cols=57 Identities=14% Similarity=0.123 Sum_probs=40.3
Q ss_pred cCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCeEE
Q psy4411 36 GRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQQE 95 (99)
Q Consensus 36 g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~~ 95 (99)
.+++|+++.+.|-.. .+.+.++..++.-|.+|+++.-.. +-.++..+++++.|..+.
T Consensus 29 ~~l~gk~~lVTGas~--GIG~aia~~la~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~ 85 (275)
T 4imr_A 29 FGLRGRTALVTGSSR--GIGAAIAEGLAGAGAHVILHGVKP-GSTAAVQQRIIASGGTAQ 85 (275)
T ss_dssp HCCTTCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEESST-TTTHHHHHHHHHTTCCEE
T ss_pred CCCCCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEcCCH-HHHHHHHHHHHhcCCeEE
Confidence 468999999999755 499999999999999998876522 123344455555555444
No 221
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=69.94 E-value=9.9 Score=25.70 Aligned_cols=34 Identities=12% Similarity=0.098 Sum_probs=28.6
Q ss_pred CCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEEC
Q psy4411 38 VNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVS 73 (99)
Q Consensus 38 l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~ 73 (99)
++|+++.+.|-.. -+.+.++..++.-|.++.+..
T Consensus 5 l~~k~vlITGas~--gIG~~~a~~l~~~G~~v~~~~ 38 (255)
T 3icc_A 5 LKGKVALVTGASR--GIGRAIAKRLANDGALVAIHY 38 (255)
T ss_dssp TTTCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEE
T ss_pred cCCCEEEEECCCC--hHHHHHHHHHHHCCCeEEEEe
Confidence 6788888888755 499999999999999998853
No 222
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=69.94 E-value=11 Score=25.64 Aligned_cols=56 Identities=13% Similarity=-0.015 Sum_probs=35.4
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCeE
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQQ 94 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~ 94 (99)
..+++++.+.|-..- +.+.++..+++.|.+|++.+-..-.-.+...+..++.+.++
T Consensus 10 ~~~~k~vlITGas~g--iG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 65 (256)
T 3ezl_A 10 VMSQRIAYVTGGMGG--IGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDF 65 (256)
T ss_dssp ---CEEEEETTTTSH--HHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCC
T ss_pred CCCCCEEEEECCCCh--HHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCee
Confidence 477888999997654 99999999999999998876222222233444444444433
No 223
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=69.79 E-value=6.3 Score=30.52 Aligned_cols=37 Identities=22% Similarity=0.130 Sum_probs=31.0
Q ss_pred Hhc-CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEEC
Q psy4411 34 EMG-RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVS 73 (99)
Q Consensus 34 ~~g-~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~ 73 (99)
++| +++|+++++.|-+ +|....+..+..+|++++-++
T Consensus 203 ~~g~~l~gk~vaVqG~G---nVG~~aa~~L~e~GakVVavs 240 (421)
T 1v9l_A 203 KLWGGIEGKTVAIQGMG---NVGRWTAYWLEKMGAKVIAVS 240 (421)
T ss_dssp HHHSCCTTCEEEEECCS---HHHHHHHHHHHTTTCEEEEEE
T ss_pred hcCCCcCCCEEEEECcC---HHHHHHHHHHHHCCCEEEEEE
Confidence 344 6999999999975 399999999999999998555
No 224
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=69.71 E-value=10 Score=26.60 Aligned_cols=36 Identities=11% Similarity=0.087 Sum_probs=31.0
Q ss_pred cCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEEC
Q psy4411 36 GRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVS 73 (99)
Q Consensus 36 g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~ 73 (99)
..++++++.+.|-.. -+.+.++..++.-|.+|+++.
T Consensus 25 ~~~~~k~~lVTGas~--GIG~aia~~la~~G~~V~~~~ 60 (280)
T 4da9_A 25 TQKARPVAIVTGGRR--GIGLGIARALAASGFDIAITG 60 (280)
T ss_dssp SCCCCCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEE
T ss_pred hccCCCEEEEecCCC--HHHHHHHHHHHHCCCeEEEEe
Confidence 458889999999755 499999999999999998886
No 225
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=69.64 E-value=7.4 Score=26.53 Aligned_cols=36 Identities=11% Similarity=-0.043 Sum_probs=30.3
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
.++++++.+.|-.. .+.+.++..++.-|.+|++..-
T Consensus 18 ~~~~k~vlItGasg--giG~~la~~l~~~G~~v~~~~r 53 (274)
T 1ja9_A 18 PLAGKVALTTGAGR--GIGRGIAIELGRRGASVVVNYG 53 (274)
T ss_dssp TTTTCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEcC
Confidence 47888999999755 4999999999999999888754
No 226
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=69.54 E-value=14 Score=27.60 Aligned_cols=54 Identities=9% Similarity=0.041 Sum_probs=38.6
Q ss_pred CCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCC---CCHHHH----HHHHhcCCeEE
Q psy4411 39 NGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLG---MPESIQ----EFVASKGKQQE 95 (99)
Q Consensus 39 ~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~---~~~~~~----~~a~~~g~~~~ 95 (99)
.+++++++|.+. +.-.++..++.+|.+|+++.+.... .++++. +.+++.|+++.
T Consensus 176 ~~~~vvViGgG~---~g~e~A~~l~~~g~~Vtli~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~ 236 (470)
T 1dxl_A 176 IPKKLVVIGAGY---IGLEMGSVWGRIGSEVTVVEFASEIVPTMDAEIRKQFQRSLEKQGMKFK 236 (470)
T ss_dssp CCSEEEESCCSH---HHHHHHHHHHHHTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHSSCCEE
T ss_pred cCCeEEEECCCH---HHHHHHHHHHHcCCcEEEEEcCCcccccccHHHHHHHHHHHHHcCCEEE
Confidence 357999999754 7788888899999999999875432 344443 44567776654
No 227
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=69.30 E-value=7.9 Score=26.19 Aligned_cols=36 Identities=14% Similarity=0.286 Sum_probs=27.4
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPP 75 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~ 75 (99)
.+.+.+|+++|-+ ++..+++..+++.|.+|++..+.
T Consensus 16 ~~~~~~I~iiG~G---~mG~~la~~l~~~g~~V~~~~~~ 51 (209)
T 2raf_A 16 YFQGMEITIFGKG---NMGQAIGHNFEIAGHEVTYYGSK 51 (209)
T ss_dssp ----CEEEEECCS---HHHHHHHHHHHHTTCEEEEECTT
T ss_pred ccCCCEEEEECCC---HHHHHHHHHHHHCCCEEEEEcCC
Confidence 3777899999954 39999999999999998888653
No 228
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=69.13 E-value=14 Score=23.01 Aligned_cols=46 Identities=17% Similarity=0.151 Sum_probs=34.3
Q ss_pred cEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCeE
Q psy4411 41 LTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQQ 94 (99)
Q Consensus 41 ~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~ 94 (99)
.+|+++|-+ ++...++..+...|.+++++-. +++..+.+++.|..+
T Consensus 8 ~~viIiG~G---~~G~~la~~L~~~g~~v~vid~-----~~~~~~~~~~~g~~~ 53 (140)
T 3fwz_A 8 NHALLVGYG---RVGSLLGEKLLASDIPLVVIET-----SRTRVDELRERGVRA 53 (140)
T ss_dssp SCEEEECCS---HHHHHHHHHHHHTTCCEEEEES-----CHHHHHHHHHTTCEE
T ss_pred CCEEEECcC---HHHHHHHHHHHHCCCCEEEEEC-----CHHHHHHHHHcCCCE
Confidence 479999963 5999999999999999998865 345555555555543
No 229
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=68.89 E-value=21 Score=26.82 Aligned_cols=52 Identities=15% Similarity=0.116 Sum_probs=37.6
Q ss_pred CcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCC---CCCHHH----HHHHHhcCCeE
Q psy4411 40 GLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNL---GMPESI----QEFVASKGKQQ 94 (99)
Q Consensus 40 g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~---~~~~~~----~~~a~~~g~~~ 94 (99)
+++++++|.+. +.-.++..++.+|.+|+++.+... ..++++ .+.+++.|+++
T Consensus 187 ~~~vvViGgG~---~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~~~~~l~~~gv~i 245 (478)
T 3dk9_A 187 PGRSVIVGAGY---IAVEMAGILSALGSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEV 245 (478)
T ss_dssp CSEEEEECCSH---HHHHHHHHHHHTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEE
T ss_pred CccEEEECCCH---HHHHHHHHHHHcCCeEEEEEeCCccccccCHHHHHHHHHHHHHCCCEE
Confidence 47999999864 788888999999999999987432 134444 34456677665
No 230
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=68.82 E-value=10 Score=26.47 Aligned_cols=35 Identities=9% Similarity=-0.046 Sum_probs=27.7
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEEC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVS 73 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~ 73 (99)
.++|+++.+.|-.. -+.+.++..++.-|.+|++..
T Consensus 24 ~~~~k~~lVTGas~--GIG~aia~~la~~G~~Vv~~~ 58 (267)
T 3u5t_A 24 METNKVAIVTGASR--GIGAAIAARLASDGFTVVINY 58 (267)
T ss_dssp ---CCEEEEESCSS--HHHHHHHHHHHHHTCEEEEEE
T ss_pred ccCCCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEc
Confidence 36788899999765 499999999999999998873
No 231
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=68.15 E-value=17 Score=25.37 Aligned_cols=56 Identities=9% Similarity=0.068 Sum_probs=39.0
Q ss_pred cCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCeE
Q psy4411 36 GRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQQ 94 (99)
Q Consensus 36 g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~ 94 (99)
.+++|+++.+.|-.. -+.+.++..++.-|.+|++++-.. +-.+++.+++++.|.++
T Consensus 28 ~~l~gk~~lVTGas~--GIG~aia~~la~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~ 83 (276)
T 3r1i_A 28 FDLSGKRALITGAST--GIGKKVALAYAEAGAQVAVAARHS-DALQVVADEIAGVGGKA 83 (276)
T ss_dssp GCCTTCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEESSG-GGGHHHHHHHHHTTCCC
T ss_pred cCCCCCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHHhcCCeE
Confidence 468899999999865 499999999999999999887532 11233444444444433
No 232
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=68.02 E-value=25 Score=26.22 Aligned_cols=54 Identities=9% Similarity=0.020 Sum_probs=39.0
Q ss_pred CCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCC---CCHHH----HHHH-HhcCCeEE
Q psy4411 39 NGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLG---MPESI----QEFV-ASKGKQQE 95 (99)
Q Consensus 39 ~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~---~~~~~----~~~a-~~~g~~~~ 95 (99)
.+++++++|.+. +.--++..++++|.+|+++.+...- +++++ .+.+ ++.|+++.
T Consensus 173 ~~~~vvViGgG~---~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~~gv~i~ 234 (468)
T 2qae_A 173 VPKTMVVIGGGV---IGLELGSVWARLGAEVTVVEFAPRCAPTLDEDVTNALVGALAKNEKMKFM 234 (468)
T ss_dssp CCSEEEEECCSH---HHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCCEEE
T ss_pred CCceEEEECCCH---HHHHHHHHHHHhCCEEEEEecCCcccccCCHHHHHHHHHHHhhcCCcEEE
Confidence 357999999864 7888888999999999999875332 34443 3446 67777653
No 233
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=67.86 E-value=5.8 Score=28.09 Aligned_cols=35 Identities=14% Similarity=0.080 Sum_probs=30.3
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
.+++++++++|-+ .+.++++..+...|.+++++.+
T Consensus 126 ~~~~~~v~iiGaG---~~g~aia~~L~~~g~~V~v~~r 160 (275)
T 2hk9_A 126 EVKEKSILVLGAG---GASRAVIYALVKEGAKVFLWNR 160 (275)
T ss_dssp TGGGSEEEEECCS---HHHHHHHHHHHHHTCEEEEECS
T ss_pred CcCCCEEEEECch---HHHHHHHHHHHHcCCEEEEEEC
Confidence 5788999999974 3999999999999998888775
No 234
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=67.84 E-value=16 Score=25.11 Aligned_cols=36 Identities=14% Similarity=0.039 Sum_probs=31.5
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
.++|+++.+.|-..- +.+.++..++.-|.+|+++.-
T Consensus 8 ~l~~k~vlVTGas~g--IG~aia~~l~~~G~~V~~~~r 43 (264)
T 3ucx_A 8 LLTDKVVVISGVGPA--LGTTLARRCAEQGADLVLAAR 43 (264)
T ss_dssp TTTTCEEEEESCCTT--HHHHHHHHHHHTTCEEEEEES
T ss_pred CcCCcEEEEECCCcH--HHHHHHHHHHHCcCEEEEEeC
Confidence 478999999998665 999999999999999988864
No 235
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=67.66 E-value=7.7 Score=30.13 Aligned_cols=38 Identities=18% Similarity=0.174 Sum_probs=31.4
Q ss_pred HHhc-CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEEC
Q psy4411 33 EEMG-RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVS 73 (99)
Q Consensus 33 e~~g-~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~ 73 (99)
++.| +++|+||++.|=+ +|....+..+..+|.+++.++
T Consensus 213 ~~~g~~l~g~~vaVqG~G---nVG~~aa~~l~e~GakVVavs 251 (424)
T 3k92_A 213 KKKGIKLQNARIIIQGFG---NAGSFLAKFMHDAGAKVIGIS 251 (424)
T ss_dssp HHTTCCGGGCEEEEECCS---HHHHHHHHHHHHHTCEEEEEE
T ss_pred HHcCCCcccCEEEEECCC---HHHHHHHHHHHHCCCEEEEEE
Confidence 3445 6999999999974 399999999999999987555
No 236
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=67.45 E-value=19 Score=28.22 Aligned_cols=63 Identities=17% Similarity=0.121 Sum_probs=42.1
Q ss_pred HHHhcCCCCcE-EEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHH---HHHHHhcCCeEE
Q psy4411 32 KEEMGRVNGLT-ITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESI---QEFVASKGKQQE 95 (99)
Q Consensus 32 ~e~~g~l~g~~-i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~---~~~a~~~g~~~~ 95 (99)
.+.++..++.+ ++++|.+|||-=.--.+..+...|.+|.++.|..- .+++. .+.+++.|+.+.
T Consensus 44 ~~~~~~~~~~~v~VlcG~GNNGGDGlv~AR~L~~~G~~V~v~~~~~~-~~~~~~~~~~~~~~~g~~~~ 110 (502)
T 3rss_A 44 EEELGNLSDYRFLVLCGGGNNGGDGFVVARNLLGVVKDVLVVFLGKK-KTPDCEYNYGLYKKFGGKVV 110 (502)
T ss_dssp HHHHSCCTTCEEEEEECSSHHHHHHHHHHHHHTTTSSEEEEEECCSS-CCHHHHHHHHHHHHTTCCEE
T ss_pred HHhcCccCCCEEEEEECCCCCHHHHHHHHHHHHHCCCeEEEEEECCC-CCHHHHHHHHHHHhCCCcee
Confidence 34555444545 56789999977666777778888998888877443 55554 344667777663
No 237
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=67.43 E-value=4.1 Score=31.55 Aligned_cols=39 Identities=10% Similarity=0.084 Sum_probs=32.1
Q ss_pred HHhc-CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 33 EEMG-RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 33 e~~g-~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
+++| +++|++|++.|.++ |....+..+..+|++++-++-
T Consensus 204 ~~~g~~l~g~~vaVqG~Gn---VG~~~a~~L~~~GakvVavsD 243 (421)
T 2yfq_A 204 KRFGIKMEDAKIAVQGFGN---VGTFTVKNIERQGGKVCAIAE 243 (421)
T ss_dssp HHTTCCGGGSCEEEECCSH---HHHHHHHHHHHTTCCEEECCB
T ss_pred HhcCCCccCCEEEEECcCH---HHHHHHHHHHHCCCEEEEEEe
Confidence 3455 58999999999754 999999999999999985553
No 238
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=67.31 E-value=17 Score=25.69 Aligned_cols=42 Identities=17% Similarity=0.271 Sum_probs=32.7
Q ss_pred cCCCCcEEEEECCC--------------CCchhHHHHHHHHhhCCCEEEEE-CCCCC
Q psy4411 36 GRVNGLTITMVGDL--------------KNGRTVHSLARLLTLYDVKLNYV-SPPNL 77 (99)
Q Consensus 36 g~l~g~~i~~vGd~--------------~n~rv~~Sl~~~~~~~G~~v~~~-~P~~~ 77 (99)
.+++|+++.+.|-+ ..|.+...++..++..|.+|+++ .|...
T Consensus 4 ~~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~l 60 (226)
T 1u7z_A 4 NDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL 60 (226)
T ss_dssp CTTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC
T ss_pred cCCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCccc
Confidence 46888888888764 23569999999999999999987 45443
No 239
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=67.28 E-value=19 Score=27.12 Aligned_cols=53 Identities=15% Similarity=0.185 Sum_probs=38.5
Q ss_pred CcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCC---CCCHHH----HHHHHhcCCeEE
Q psy4411 40 GLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNL---GMPESI----QEFVASKGKQQE 95 (99)
Q Consensus 40 g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~---~~~~~~----~~~a~~~g~~~~ 95 (99)
+++++++|-+. +.-.++..++++|.+++++.+... .+++++ .+.+++.|+++.
T Consensus 166 ~~~vvVvGgG~---~g~e~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~ 225 (463)
T 2r9z_A 166 PKRVAIIGAGY---IGIELAGLLRSFGSEVTVVALEDRLLFQFDPLLSATLAENMHAQGIETH 225 (463)
T ss_dssp CSEEEEECCSH---HHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEE
T ss_pred CCEEEEECCCH---HHHHHHHHHHhcCCEEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEE
Confidence 57999999764 888889999999999999987532 234544 344567776653
No 240
>1qop_B Tryptophan synthase beta chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.79.1.1 PDB: 1k7e_B* 1k7f_B* 1kfb_B* 1k3u_B* 1tjp_B* 1wbj_B* 2cli_B* 2clk_B* 2cll_B* 2j9x_B* 3cep_B* 1kfc_B* 1k8x_B* 1kfj_B* 1kfk_B* 2rh9_B* 2rhg_B* 2j9y_B* 1cw2_B* 1a5s_B* ...
Probab=67.25 E-value=3.1 Score=31.23 Aligned_cols=44 Identities=9% Similarity=-0.115 Sum_probs=32.9
Q ss_pred hHHHHHHHHhhCCCEEEEECCCCCCCCH--HHHHHHHhcCCeEEEEe
Q psy4411 54 TVHSLARLLTLYDVKLNYVSPPNLGMPE--SIQEFVASKGKQQEVYE 98 (99)
Q Consensus 54 v~~Sl~~~~~~~G~~v~~~~P~~~~~~~--~~~~~a~~~g~~~~~~~ 98 (99)
...+++.+|+++|++++++-|+. ..+. .-+..++..|+++..++
T Consensus 114 hg~a~A~aa~~~G~~~~i~mp~~-~~~~~~~~~~~~~~~GA~V~~v~ 159 (396)
T 1qop_B 114 HGVASALASALLGLKCRIYMGAK-DVERQSPNVFRMRLMGAEVIPVH 159 (396)
T ss_dssp HHHHHHHHHHHHTCEEEEEEEHH-HHHHCHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHCCCcEEEEEcCC-chhhhhhHHHHHHHCCCEEEEEC
Confidence 89999999999999999999974 1111 11355778898887654
No 241
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=67.23 E-value=18 Score=27.39 Aligned_cols=53 Identities=17% Similarity=0.083 Sum_probs=38.3
Q ss_pred CcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCC---CCHHH----HHHHHhcCCeEE
Q psy4411 40 GLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLG---MPESI----QEFVASKGKQQE 95 (99)
Q Consensus 40 g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~---~~~~~----~~~a~~~g~~~~ 95 (99)
+++++++|.+. +.-.++..++.+|.+|+++.+...- +++++ .+.+++.|+++.
T Consensus 182 ~~~vvViGgG~---ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~ 241 (499)
T 1xdi_A 182 PDHLIVVGSGV---TGAEFVDAYTELGVPVTVVASQDHVLPYEDADAALVLEESFAERGVRLF 241 (499)
T ss_dssp CSSEEEESCSH---HHHHHHHHHHHTTCCEEEECSSSSSSCCSSHHHHHHHHHHHHHTTCEEE
T ss_pred CCeEEEECCCH---HHHHHHHHHHHcCCeEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEE
Confidence 47899999754 7788888899999999999875432 34444 344567777663
No 242
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=67.01 E-value=7.1 Score=27.26 Aligned_cols=34 Identities=12% Similarity=0.058 Sum_probs=29.5
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
+++| +++++|-+. +.++++..+...|.+++++.+
T Consensus 114 ~l~~-~v~iiG~G~---~g~~~a~~l~~~g~~v~v~~r 147 (263)
T 2d5c_A 114 PLKG-PALVLGAGG---AGRAVAFALREAGLEVWVWNR 147 (263)
T ss_dssp CCCS-CEEEECCSH---HHHHHHHHHHHTTCCEEEECS
T ss_pred CCCC-eEEEECCcH---HHHHHHHHHHHCCCEEEEEEC
Confidence 6889 999999743 999999999999998888876
No 243
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=67.01 E-value=24 Score=24.85 Aligned_cols=53 Identities=6% Similarity=0.008 Sum_probs=38.8
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCe
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQ 93 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~ 93 (99)
+|+|+++.+.|-..- +.+..+..+++-|.+|.++.-..- ..+..+.+.+.|.+
T Consensus 4 ~L~gKvalVTGas~G--IG~aia~~la~~Ga~Vv~~~r~~~--~~~~~~~~~~~~~~ 56 (258)
T 4gkb_A 4 NLQDKVVIVTGGASG--IGGAISMRLAEERAIPVVFARHAP--DGAFLDALAQRQPR 56 (258)
T ss_dssp CCTTCEEEEETTTSH--HHHHHHHHHHHTTCEEEEEESSCC--CHHHHHHHHHHCTT
T ss_pred CCCCCEEEEeCCCCH--HHHHHHHHHHHcCCEEEEEECCcc--cHHHHHHHHhcCCC
Confidence 589999999998664 999999999999999998875322 23444444444443
No 244
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=66.86 E-value=8.9 Score=26.72 Aligned_cols=36 Identities=14% Similarity=0.039 Sum_probs=30.2
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
.++|+++.+.|-.. -+.+.++..++.-|.+|+++.-
T Consensus 26 ~~~~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r 61 (283)
T 1g0o_A 26 SLEGKVALVTGAGR--GIGREMAMELGRRGCKVIVNYA 61 (283)
T ss_dssp CCTTCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeC
Confidence 47888888888755 4999999999999999988754
No 245
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=66.73 E-value=17 Score=24.56 Aligned_cols=36 Identities=11% Similarity=0.104 Sum_probs=30.5
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
+++++++.+.|-.. .+.+.++..++..|.+|++++-
T Consensus 11 ~~~~k~vlITGasg--giG~~~a~~l~~~G~~V~~~~r 46 (265)
T 1h5q_A 11 SFVNKTIIVTGGNR--GIGLAFTRAVAAAGANVAVIYR 46 (265)
T ss_dssp CCTTEEEEEETTTS--HHHHHHHHHHHHTTEEEEEEES
T ss_pred ccCCCEEEEECCCc--hHHHHHHHHHHHCCCeEEEEeC
Confidence 47788999999755 4999999999999999988864
No 246
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=66.72 E-value=19 Score=27.18 Aligned_cols=54 Identities=17% Similarity=0.124 Sum_probs=38.7
Q ss_pred CCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCC---CCCHHHH----HHHHhcCCeEE
Q psy4411 39 NGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNL---GMPESIQ----EFVASKGKQQE 95 (99)
Q Consensus 39 ~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~---~~~~~~~----~~a~~~g~~~~ 95 (99)
.+++++++|.+. +.-.++..++.+|.+|+++.+... .+++++. +.+++.|+++.
T Consensus 184 ~~~~vvViGgG~---ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~Gv~i~ 244 (479)
T 2hqm_A 184 QPKKVVVVGAGY---IGIELAGVFHGLGSETHLVIRGETVLRKFDECIQNTITDHYVKEGINVH 244 (479)
T ss_dssp CCSEEEEECSSH---HHHHHHHHHHHTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHHTCEEE
T ss_pred cCCeEEEECCCH---HHHHHHHHHHHcCCceEEEEeCCccccccCHHHHHHHHHHHHhCCeEEE
Confidence 357999999864 788888889999999999987432 2345543 44566676654
No 247
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=66.70 E-value=5.7 Score=24.98 Aligned_cols=33 Identities=18% Similarity=0.234 Sum_probs=27.2
Q ss_pred CCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 39 NGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 39 ~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
.+.+|+++|-+ ++.+.++..+...|.+++++.+
T Consensus 20 ~~~~v~iiG~G---~iG~~~a~~l~~~g~~v~v~~r 52 (144)
T 3oj0_A 20 GGNKILLVGNG---MLASEIAPYFSYPQYKVTVAGR 52 (144)
T ss_dssp CCCEEEEECCS---HHHHHHGGGCCTTTCEEEEEES
T ss_pred cCCEEEEECCC---HHHHHHHHHHHhCCCEEEEEcC
Confidence 38899999964 4999999998889999777665
No 248
>2xdq_A Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=66.68 E-value=5.8 Score=30.24 Aligned_cols=35 Identities=26% Similarity=0.302 Sum_probs=29.7
Q ss_pred cCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEEC
Q psy4411 36 GRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVS 73 (99)
Q Consensus 36 g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~ 73 (99)
..+.|+++++.||+. .+.|++.++.-+||+++.++
T Consensus 313 ~~l~GKrv~i~g~~~---~~~~la~~L~elGm~vv~~g 347 (460)
T 2xdq_A 313 ELVRGKSVFFMGDNL---LEISLARFLIRCGMRVLEIG 347 (460)
T ss_dssp HHHTTCEEEECCCSS---CHHHHHHHHHHTTCEEEEEE
T ss_pred HHhcCCEEEEECCch---HHHHHHHHHHHCCCEEEEeC
Confidence 348999999999976 67789888889999988776
No 249
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=66.62 E-value=11 Score=26.01 Aligned_cols=59 Identities=14% Similarity=0.202 Sum_probs=39.6
Q ss_pred hcCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCeEEE
Q psy4411 35 MGRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQQEV 96 (99)
Q Consensus 35 ~g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~~~ 96 (99)
...++|+++.+.|-.. -+.+.++..++..|.+|++++-.. +..++..+.+++.|.+++.
T Consensus 24 m~~l~~k~vlITGas~--gIG~~la~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~ 82 (262)
T 3rkr_A 24 MSSLSGQVAVVTGASR--GIGAAIARKLGSLGARVVLTARDV-EKLRAVEREIVAAGGEAES 82 (262)
T ss_dssp -CTTTTCEEEESSTTS--HHHHHHHHHHHHTTCEEEEEESCH-HHHHHHHHHHHHTTCEEEE
T ss_pred hhccCCCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEECCH-HHHHHHHHHHHHhCCceeE
Confidence 4568899999999755 499999999999999998886421 1112233444455555544
No 250
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=66.55 E-value=10 Score=24.09 Aligned_cols=35 Identities=17% Similarity=0.075 Sum_probs=29.2
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
...+.+|+++|-+ ++...++..+...|.+|+++.+
T Consensus 16 ~~~~~~v~IiG~G---~iG~~la~~L~~~g~~V~vid~ 50 (155)
T 2g1u_A 16 KQKSKYIVIFGCG---RLGSLIANLASSSGHSVVVVDK 50 (155)
T ss_dssp -CCCCEEEEECCS---HHHHHHHHHHHHTTCEEEEEES
T ss_pred ccCCCcEEEECCC---HHHHHHHHHHHhCCCeEEEEEC
Confidence 3667899999963 4999999999999999998865
No 251
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=66.48 E-value=18 Score=25.68 Aligned_cols=54 Identities=17% Similarity=0.043 Sum_probs=38.2
Q ss_pred cEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHH---HHHHHhcCCeE
Q psy4411 41 LTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESI---QEFVASKGKQQ 94 (99)
Q Consensus 41 ~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~---~~~a~~~g~~~ 94 (99)
.-++++|.+|||-=.--.+..+...|.+|.++.|..-...++. .+.++..|+.+
T Consensus 60 ~v~VlcG~GNNGGDGlv~AR~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~g~~~ 116 (246)
T 1jzt_A 60 HVFVIAGPGNNGGDGLVCARHLKLFGYNPVVFYPKRSERTEFYKQLVHQLNFFKVPV 116 (246)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHHHTTCCEEEECCCCCTTCHHHHHHHHHHHHTTCCE
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHCCCeEEEEEcCCCCCCHHHHHHHHHHHHcCCcE
Confidence 4567889999987777888888889999998877432444443 34455667665
No 252
>2xdq_B Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=66.47 E-value=5.1 Score=31.22 Aligned_cols=36 Identities=11% Similarity=0.311 Sum_probs=30.1
Q ss_pred cCCCCcEEEEECCCCCchhHHHHHHHH-hhCCCEEEEECC
Q psy4411 36 GRVNGLTITMVGDLKNGRTVHSLARLL-TLYDVKLNYVSP 74 (99)
Q Consensus 36 g~l~g~~i~~vGd~~n~rv~~Sl~~~~-~~~G~~v~~~~P 74 (99)
..+.|+++++.||.. -+.|+..++ .-+||+++.++-
T Consensus 299 ~~l~Gkrv~i~gd~~---~~~~l~~~L~~elGm~vv~~gt 335 (511)
T 2xdq_B 299 QNLTGKKAVVFGDNT---HAAAMTKILSREMGIHVVWAGT 335 (511)
T ss_dssp HTTTTCEEEEEECHH---HHHHHHHHHHHHHCCEEEEEEE
T ss_pred HhccCCEEEEEcCCh---HHHHHHHHHHHhCCCEEEEeec
Confidence 468999999999965 678999999 689999987654
No 253
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=66.43 E-value=8.5 Score=28.68 Aligned_cols=35 Identities=11% Similarity=0.103 Sum_probs=30.4
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
.+.|.+|+++|-+ ++....+..+..+|++|+...+
T Consensus 165 ~l~g~~V~ViG~G---~iG~~~a~~a~~~Ga~V~~~d~ 199 (377)
T 2vhw_A 165 GVEPADVVVIGAG---TAGYNAARIANGMGATVTVLDI 199 (377)
T ss_dssp TBCCCEEEEECCS---HHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCEEEEECCC---HHHHHHHHHHHhCCCEEEEEeC
Confidence 5789999999973 5999999999999999887765
No 254
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=66.15 E-value=9.7 Score=26.90 Aligned_cols=37 Identities=11% Similarity=-0.003 Sum_probs=31.5
Q ss_pred cCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 36 GRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 36 g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
++++|+++.+.|-.. -+.+.++..++.-|.+|+++.-
T Consensus 45 ~~l~~k~vlVTGas~--GIG~aia~~la~~G~~V~~~~~ 81 (294)
T 3r3s_A 45 GRLKDRKALVTGGDS--GIGRAAAIAYAREGADVAINYL 81 (294)
T ss_dssp STTTTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEECC
T ss_pred cCCCCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeC
Confidence 358899999999755 4999999999999999988754
No 255
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=65.95 E-value=21 Score=28.45 Aligned_cols=57 Identities=18% Similarity=0.168 Sum_probs=41.1
Q ss_pred CCCcEEEEECC-CCCchhHHHHHHHHhhCCCEEEEECCCCCCCC--------HHHHHHHHhcCCeEEE
Q psy4411 38 VNGLTITMVGD-LKNGRTVHSLARLLTLYDVKLNYVSPPNLGMP--------ESIQEFVASKGKQQEV 96 (99)
Q Consensus 38 l~g~~i~~vGd-~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~--------~~~~~~a~~~g~~~~~ 96 (99)
..+++++++|. +.. +.-.++..++.+|.+++++.+.....+ ..+.+.+++.|+++..
T Consensus 521 ~~g~~VvViG~ggG~--~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~~~~~~~~~l~~~l~~~GV~i~~ 586 (690)
T 3k30_A 521 PDGKKVVVYDDDHYY--LGGVVAELLAQKGYEVSIVTPGAQVSSWTNNTFEVNRIQRRLIENGVARVT 586 (690)
T ss_dssp CSSSEEEEEECSCSS--HHHHHHHHHHHTTCEEEEEESSSSTTGGGGGGTCHHHHHHHHHHTTCEEEE
T ss_pred CCCCEEEEEcCCCCc--cHHHHHHHHHhCCCeeEEEecccccccccccchhHHHHHHHHHHCCCEEEc
Confidence 45788999994 233 888899999999999999987543221 2345667788877653
No 256
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=65.89 E-value=19 Score=21.61 Aligned_cols=32 Identities=22% Similarity=0.214 Sum_probs=26.2
Q ss_pred CcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 40 GLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 40 g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
+.+|+++|-+ ++...++..+...|.+++++.+
T Consensus 4 ~m~i~IiG~G---~iG~~~a~~L~~~g~~v~~~d~ 35 (140)
T 1lss_A 4 GMYIIIAGIG---RVGYTLAKSLSEKGHDIVLIDI 35 (140)
T ss_dssp -CEEEEECCS---HHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCC---HHHHHHHHHHHhCCCeEEEEEC
Confidence 4689999863 4999999999999999988865
No 257
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=65.84 E-value=7.1 Score=30.36 Aligned_cols=35 Identities=14% Similarity=0.116 Sum_probs=29.4
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
.+.|+++++.||+. -+.+++.++.-+||+++.++-
T Consensus 329 ~l~GKrv~i~~~~~---~~~~l~~~L~ElGmevv~~gt 363 (483)
T 3pdi_A 329 RLEGKRVLLYTGGV---KSWSVVSALQDLGMKVVATGT 363 (483)
T ss_dssp HHTTCEEEEECSSS---CHHHHHHHHHHHTCEEEEECB
T ss_pred HhcCCEEEEECCCc---hHHHHHHHHHHCCCEEEEEec
Confidence 48999999999976 466888888899999998754
No 258
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=65.56 E-value=9.2 Score=25.96 Aligned_cols=36 Identities=14% Similarity=0.107 Sum_probs=29.9
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
+++++++.+.|-.. .+.+.++..++..|.+|+++.-
T Consensus 4 ~l~~k~vlITGasg--giG~~~a~~l~~~G~~V~~~~r 39 (261)
T 1gee_A 4 DLEGKVVVITGSST--GLGKSMAIRFATEKAKVVVNYR 39 (261)
T ss_dssp GGTTCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEcC
Confidence 46788999999755 4999999999999999888754
No 259
>2l17_A Synarsc, arsenate reductase; alpha/beta sandwich, oxidoreductase; NMR {Synechocystis} PDB: 2l18_A 2l19_A
Probab=65.51 E-value=14 Score=23.62 Aligned_cols=51 Identities=8% Similarity=0.046 Sum_probs=35.7
Q ss_pred cEEEEECCCCCchhHHHHH-----HHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCeE
Q psy4411 41 LTITMVGDLKNGRTVHSLA-----RLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQQ 94 (99)
Q Consensus 41 ~~i~~vGd~~n~rv~~Sl~-----~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~ 94 (99)
.+|.||.-+| ++||-+ .-...-...+.-++-.+-.+++..++.+++.|+++
T Consensus 5 ~~VLFVC~gN---~cRSpmAEa~~~~~~~~~~~v~SAGt~g~~~~~~a~~~l~e~Gid~ 60 (134)
T 2l17_A 5 KKVMFVCKRN---SCRSQMAEGFAKTLGAGKIAVTSCGLESSRVHPTAIAMMEEVGIDI 60 (134)
T ss_dssp EEEEEECCSS---THHHHHHHHHHHHHSBTTEEEEEECCTTSSCCHHHHHHHHTTTCCC
T ss_pred CEEEEEeCCc---hHHHHHHHHHHHHHcCCCEEEEcccCCCCCCCHHHHHHHHHcCCCc
Confidence 4799998755 666643 22222136677777777778999999999999875
No 260
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=65.27 E-value=35 Score=24.43 Aligned_cols=40 Identities=15% Similarity=0.147 Sum_probs=32.9
Q ss_pred HHHhc--CCCCcEEEEECCCCCchhHHHHHHHHhhCCC-EEEEECC
Q psy4411 32 KEEMG--RVNGLTITMVGDLKNGRTVHSLARLLTLYDV-KLNYVSP 74 (99)
Q Consensus 32 ~e~~g--~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~-~v~~~~P 74 (99)
.+.++ .+++++++++|-+ .+++..+..+...|. +++++..
T Consensus 131 l~~~~~~~l~~~~vlVlGaG---g~g~aia~~L~~~G~~~V~v~nR 173 (297)
T 2egg_A 131 LEEEMNITLDGKRILVIGAG---GGARGIYFSLLSTAAERIDMANR 173 (297)
T ss_dssp HHHHTTCCCTTCEEEEECCS---HHHHHHHHHHHTTTCSEEEEECS
T ss_pred HHHhCCCCCCCCEEEEECcH---HHHHHHHHHHHHCCCCEEEEEeC
Confidence 34454 6889999999975 399999999999997 8998865
No 261
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=65.26 E-value=31 Score=24.14 Aligned_cols=44 Identities=18% Similarity=0.079 Sum_probs=33.0
Q ss_pred cEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCC
Q psy4411 41 LTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGK 92 (99)
Q Consensus 41 ~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~ 92 (99)
.||+++|-++ +..+++..+++.|.+|++..+ +++-.+.+.+.|.
T Consensus 4 ~~I~iiG~G~---mG~~~a~~l~~~G~~V~~~d~-----~~~~~~~~~~~g~ 47 (302)
T 2h78_A 4 KQIAFIGLGH---MGAPMATNLLKAGYLLNVFDL-----VQSAVDGLVAAGA 47 (302)
T ss_dssp CEEEEECCST---THHHHHHHHHHTTCEEEEECS-----SHHHHHHHHHTTC
T ss_pred CEEEEEeecH---HHHHHHHHHHhCCCeEEEEcC-----CHHHHHHHHHCCC
Confidence 5899999865 899999999999999887754 3444555555454
No 262
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=65.22 E-value=9.7 Score=25.93 Aligned_cols=35 Identities=11% Similarity=-0.039 Sum_probs=27.8
Q ss_pred CCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 38 VNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 38 l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
+.++++.+.|-.. -+.+.++..++.-|.+|.++.-
T Consensus 2 l~~k~~lVTGas~--gIG~~ia~~l~~~G~~V~~~~~ 36 (246)
T 3osu_A 2 KMTKSALVTGASR--GIGRSIALQLAEEGYNVAVNYA 36 (246)
T ss_dssp CCSCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeC
Confidence 4567788888755 4999999999999999987643
No 263
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=65.08 E-value=7.4 Score=27.68 Aligned_cols=56 Identities=13% Similarity=0.099 Sum_probs=39.0
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCeEE
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQQE 95 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~~ 95 (99)
+|+|+++.+.|-.. -+.+..+..++.-|.+|.++.-.. +.-++..+++++.|.+..
T Consensus 6 ~L~gKvalVTGas~--GIG~aia~~la~~Ga~Vvi~~~~~-~~~~~~~~~l~~~g~~~~ 61 (255)
T 4g81_D 6 DLTGKTALVTGSAR--GLGFAYAEGLAAAGARVILNDIRA-TLLAESVDTLTRKGYDAH 61 (255)
T ss_dssp CCTTCEEEETTCSS--HHHHHHHHHHHHTTCEEEECCSCH-HHHHHHHHHHHHTTCCEE
T ss_pred CCCCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEECCH-HHHHHHHHHHHhcCCcEE
Confidence 68999988889765 499999999999999998875321 111233444555565543
No 264
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=65.04 E-value=9.4 Score=28.78 Aligned_cols=35 Identities=14% Similarity=0.159 Sum_probs=30.4
Q ss_pred CCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCC
Q psy4411 38 VNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPP 75 (99)
Q Consensus 38 l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~ 75 (99)
+.|+||.++|.+. ..+-++..+.++|.++.++.|.
T Consensus 33 ~~~~~IlIlG~G~---lg~~~~~aa~~lG~~v~v~d~~ 67 (419)
T 4e4t_A 33 LPGAWLGMVGGGQ---LGRMFCFAAQSMGYRVAVLDPD 67 (419)
T ss_dssp CTTCEEEEECCSH---HHHHHHHHHHHTTCEEEEECSC
T ss_pred CCCCEEEEECCCH---HHHHHHHHHHHCCCEEEEECCC
Confidence 6789999999753 7889999999999999998874
No 265
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=65.02 E-value=23 Score=26.50 Aligned_cols=55 Identities=9% Similarity=-0.005 Sum_probs=39.6
Q ss_pred CCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCC---CCCHH----HHHHHHhcCCeEEE
Q psy4411 39 NGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNL---GMPES----IQEFVASKGKQQEV 96 (99)
Q Consensus 39 ~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~---~~~~~----~~~~a~~~g~~~~~ 96 (99)
+.++++++|.+. +.--++..++++|.+++++....- ..+++ +.+.+++.|+++..
T Consensus 146 ~~~~vvViGgG~---ig~E~A~~l~~~g~~Vtlv~~~~~ll~~~d~~~~~~~~~~l~~~gV~i~~ 207 (437)
T 4eqs_A 146 QVDKVLVVGAGY---VSLEVLENLYERGLHPTLIHRSDKINKLMDADMNQPILDELDKREIPYRL 207 (437)
T ss_dssp TCCEEEEECCSH---HHHHHHHHHHHHTCEEEEEESSSCCSTTSCGGGGHHHHHHHHHTTCCEEE
T ss_pred CCcEEEEECCcc---chhhhHHHHHhcCCcceeeeeeccccccccchhHHHHHHHhhccceEEEe
Confidence 467999999865 888899999999999999865321 12333 45556778877654
No 266
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=64.99 E-value=11 Score=25.52 Aligned_cols=36 Identities=11% Similarity=0.051 Sum_probs=30.1
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
+++++++.+.|-.. -+...++..++..|.+|+++.-
T Consensus 2 ~l~~k~vlITGas~--gIG~~~a~~l~~~G~~v~~~~r 37 (247)
T 3lyl_A 2 SLNEKVALVTGASR--GIGFEVAHALASKGATVVGTAT 37 (247)
T ss_dssp TTTTCEEEESSCSS--HHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeC
Confidence 36788888889755 4999999999999999988765
No 267
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=64.94 E-value=15 Score=24.87 Aligned_cols=36 Identities=11% Similarity=-0.024 Sum_probs=30.9
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
+++++++.+.|-.. .+.+.++..++..|.+|+++.-
T Consensus 6 ~~~~k~vlITGas~--giG~~~a~~l~~~G~~V~~~~r 41 (253)
T 3qiv_A 6 RFENKVGIVTGSGG--GIGQAYAEALAREGAAVVVADI 41 (253)
T ss_dssp TTTTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEES
T ss_pred ccCCCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEcC
Confidence 47889999999755 4999999999999999988764
No 268
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=64.61 E-value=24 Score=26.20 Aligned_cols=47 Identities=4% Similarity=0.068 Sum_probs=34.6
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCC----CCHHHHHH
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLG----MPESIQEF 86 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~----~~~~~~~~ 86 (99)
...+++++++|.+. +.-.++..++.+|.+|+++.+.... +++++.+.
T Consensus 145 ~~~~~~vvViGgG~---~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~ 195 (449)
T 3kd9_A 145 KYKVENVVIIGGGY---IGIEMAEAFAAQGKNVTMIVRGERVLRRSFDKEVTDI 195 (449)
T ss_dssp SSCCCEEEEECCSH---HHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHH
T ss_pred hcCCCeEEEECCCH---HHHHHHHHHHhCCCeEEEEEcCCccchhhcCHHHHHH
Confidence 34678999999864 7888888999999999999764321 45555443
No 269
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=64.57 E-value=18 Score=25.08 Aligned_cols=36 Identities=17% Similarity=0.155 Sum_probs=31.5
Q ss_pred cCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEEC
Q psy4411 36 GRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVS 73 (99)
Q Consensus 36 g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~ 73 (99)
++++|+++.+.|-..- +.+.++..++.-|.+|+++.
T Consensus 11 ~~l~gk~~lVTGas~g--IG~a~a~~la~~G~~V~~~~ 46 (280)
T 3pgx_A 11 GSLQGRVAFITGAARG--QGRSHAVRLAAEGADIIACD 46 (280)
T ss_dssp CTTTTCEEEEESTTSH--HHHHHHHHHHHTTCEEEEEE
T ss_pred cccCCCEEEEECCCcH--HHHHHHHHHHHCCCEEEEEe
Confidence 5689999999998654 99999999999999999875
No 270
>1x1q_A Tryptophan synthase beta chain; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 2.50A {Thermus thermophilus}
Probab=64.51 E-value=4.9 Score=30.48 Aligned_cols=46 Identities=9% Similarity=-0.088 Sum_probs=33.3
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCCC-CCCHHHHHHHHhcCCeEEEEe
Q psy4411 53 RTVHSLARLLTLYDVKLNYVSPPNL-GMPESIQEFVASKGKQQEVYE 98 (99)
Q Consensus 53 rv~~Sl~~~~~~~G~~v~~~~P~~~-~~~~~~~~~a~~~g~~~~~~~ 98 (99)
|.+.+++.+|+++|++.+++-|+.- +.+..-+..++..|+++..++
T Consensus 136 Nhg~avA~aaa~~Gi~~~I~mp~~~~~~~~~kv~~~~~~GA~Vv~v~ 182 (418)
T 1x1q_A 136 QHGVSVATVAALFGLECVVYMGEEDVRRQALNVFRMKLLGAEVRPVA 182 (418)
T ss_dssp HHHHHHHHHHHHHTCEEEEEEEHHHHHTCHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEEECCCcchhhhHHHHHHHHCCCEEEEEC
Confidence 3899999999999999999999641 111122355777888887654
No 271
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=64.42 E-value=33 Score=23.87 Aligned_cols=37 Identities=14% Similarity=0.211 Sum_probs=31.3
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPP 75 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~ 75 (99)
+++|+++.+.|-.. -+.+.++..++.-|.+|.+++-.
T Consensus 6 ~l~~k~vlVTGas~--GIG~aia~~l~~~G~~V~~~~r~ 42 (285)
T 3sc4_A 6 SLRGKTMFISGGSR--GIGLAIAKRVAADGANVALVAKS 42 (285)
T ss_dssp CCTTCEEEEESCSS--HHHHHHHHHHHTTTCEEEEEESC
T ss_pred CCCCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEECC
Confidence 47889999999765 49999999999999999888753
No 272
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=63.63 E-value=16 Score=27.51 Aligned_cols=52 Identities=6% Similarity=-0.048 Sum_probs=37.2
Q ss_pred CcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCC---CCHHHH----HHHHhcCCeE
Q psy4411 40 GLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLG---MPESIQ----EFVASKGKQQ 94 (99)
Q Consensus 40 g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~---~~~~~~----~~a~~~g~~~ 94 (99)
+++++++|-+. +.-.++..++.+|.+|+++.+...- +++++. +.+++.|+++
T Consensus 185 ~~~vvViGgG~---ig~E~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gV~i 243 (482)
T 1ojt_A 185 PGKLLIIGGGI---IGLEMGTVYSTLGSRLDVVEMMDGLMQGADRDLVKVWQKQNEYRFDNI 243 (482)
T ss_dssp CSEEEEESCSH---HHHHHHHHHHHHTCEEEEECSSSSSSTTSCHHHHHHHHHHHGGGEEEE
T ss_pred CCeEEEECCCH---HHHHHHHHHHHcCCeEEEEEECCccccccCHHHHHHHHHHHHhcCCEE
Confidence 68999999754 8888888999999999999874332 345543 3455566544
No 273
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=63.55 E-value=12 Score=25.49 Aligned_cols=35 Identities=11% Similarity=0.056 Sum_probs=28.8
Q ss_pred CCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 38 VNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 38 l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
++|+++.+.|-.. .+.+.++..++.-|.+|+++.-
T Consensus 2 l~~k~vlVTGas~--giG~~ia~~l~~~G~~V~~~~r 36 (246)
T 2uvd_A 2 LKGKVALVTGASR--GIGRAIAIDLAKQGANVVVNYA 36 (246)
T ss_dssp CTTCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeC
Confidence 5778888888755 4999999999999999888753
No 274
>1e5x_A Threonine synthase; threonine biosynthesis, PLP enzyme, S-adenosyl-methionine, allostery; 2.25A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 2c2b_A* 2c2g_A*
Probab=63.02 E-value=10 Score=29.49 Aligned_cols=47 Identities=13% Similarity=0.024 Sum_probs=36.3
Q ss_pred CCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCeEEEE
Q psy4411 50 KNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQQEVY 97 (99)
Q Consensus 50 ~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~~~~ 97 (99)
..||...+++..++++|++++++.|++- .++.-..+++..|+.+...
T Consensus 191 SsGNtG~AlA~~a~~~Gi~~~I~~P~~~-~s~~k~~~~~~~GA~vi~v 237 (486)
T 1e5x_A 191 STGDTSAALSAYCASAGIPSIVFLPANK-ISMAQLVQPIANGAFVLSI 237 (486)
T ss_dssp CCSHHHHHHHHHHHHHTCCEEEEEEGGG-CCHHHHHHHHHTTCEEEEE
T ss_pred CCCHHHHHHHHHHHHcCCeEEEEECCCC-CCHHHHHHHHhCCCEEEEE
Confidence 4556999999999999999999999862 3444556677778877654
No 275
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=62.96 E-value=20 Score=27.07 Aligned_cols=54 Identities=13% Similarity=0.105 Sum_probs=38.3
Q ss_pred CCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCC---CCHHHH----HHHHhcCCeEE
Q psy4411 39 NGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLG---MPESIQ----EFVASKGKQQE 95 (99)
Q Consensus 39 ~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~---~~~~~~----~~a~~~g~~~~ 95 (99)
.+++++++|.+. +.-.++..++.+|.+|+++.+.... .++++. +.+++.|+++.
T Consensus 197 ~~~~vvViGgG~---~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~gV~v~ 257 (491)
T 3urh_A 197 VPASMIVVGGGV---IGLELGSVWARLGAKVTVVEFLDTILGGMDGEVAKQLQRMLTKQGIDFK 257 (491)
T ss_dssp CCSEEEEECCSH---HHHHHHHHHHHHTCEEEEECSSSSSSSSSCHHHHHHHHHHHHHTTCEEE
T ss_pred cCCeEEEECCCH---HHHHHHHHHHHcCCEEEEEeccccccccCCHHHHHHHHHHHHhCCCEEE
Confidence 457999999754 7888888899999999999764322 345543 44566777663
No 276
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=62.76 E-value=19 Score=26.94 Aligned_cols=54 Identities=7% Similarity=0.094 Sum_probs=37.7
Q ss_pred CCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCC---CCCHHHH----HHHHhcCCeEE
Q psy4411 39 NGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNL---GMPESIQ----EFVASKGKQQE 95 (99)
Q Consensus 39 ~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~---~~~~~~~----~~a~~~g~~~~ 95 (99)
.+++++++|.+. +.--++..++.+|.+|+++.+... .+++++. +.+++.|+++.
T Consensus 179 ~~~~v~ViGgG~---~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~v~ 239 (476)
T 3lad_A 179 VPGKLGVIGAGV---IGLELGSVWARLGAEVTVLEAMDKFLPAVDEQVAKEAQKILTKQGLKIL 239 (476)
T ss_dssp CCSEEEEECCSH---HHHHHHHHHHHTTCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTEEEE
T ss_pred CCCeEEEECCCH---HHHHHHHHHHHcCCcEEEEecCCCcCcccCHHHHHHHHHHHHhCCCEEE
Confidence 357899999754 778888899999999999876432 1345443 34556676553
No 277
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=62.59 E-value=23 Score=25.14 Aligned_cols=36 Identities=14% Similarity=0.111 Sum_probs=31.0
Q ss_pred cCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEEC
Q psy4411 36 GRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVS 73 (99)
Q Consensus 36 g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~ 73 (99)
+.++|+++.+.|-.. -+...++..++.-|.+|+++.
T Consensus 23 ~~l~gk~vlVTGas~--GIG~aia~~la~~G~~Vv~~~ 58 (322)
T 3qlj_A 23 GVVDGRVVIVTGAGG--GIGRAHALAFAAEGARVVVND 58 (322)
T ss_dssp CTTTTCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEC
T ss_pred cccCCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEe
Confidence 458899999999765 499999999999999999885
No 278
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=62.50 E-value=35 Score=23.53 Aligned_cols=36 Identities=11% Similarity=0.108 Sum_probs=31.0
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
+++|+++.+.|-.. -+.+.++..++..|.+|++++-
T Consensus 3 ~l~~k~~lVTGas~--GIG~aia~~la~~G~~V~~~~r 38 (274)
T 3e03_A 3 TLSGKTLFITGASR--GIGLAIALRAARDGANVAIAAK 38 (274)
T ss_dssp CCTTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCcEEEEECCCC--hHHHHHHHHHHHCCCEEEEEec
Confidence 47889999999865 4999999999999999998864
No 279
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=62.49 E-value=25 Score=26.46 Aligned_cols=53 Identities=9% Similarity=-0.056 Sum_probs=38.4
Q ss_pred CcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCC--CCHHHH----HHHHhcCCeEE
Q psy4411 40 GLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLG--MPESIQ----EFVASKGKQQE 95 (99)
Q Consensus 40 g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~--~~~~~~----~~a~~~g~~~~ 95 (99)
..+++++|.+. +.-.++..++.+|.+|+++.+.... +++++. +.+++.|+++.
T Consensus 187 ~~~vvViGgG~---~g~E~A~~l~~~g~~Vtlv~~~~~l~~~d~~~~~~l~~~l~~~Gv~i~ 245 (483)
T 3dgh_A 187 PGKTLVVGAGY---IGLECAGFLKGLGYEPTVMVRSIVLRGFDQQMAELVAASMEERGIPFL 245 (483)
T ss_dssp CCEEEEECCSH---HHHHHHHHHHHTTCEEEEEESSCSSTTSCHHHHHHHHHHHHHTTCCEE
T ss_pred CCcEEEECCCH---HHHHHHHHHHHcCCEEEEEeCCCCCcccCHHHHHHHHHHHHhCCCEEE
Confidence 46899999754 7888899999999999999874332 245443 44567787764
No 280
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=62.46 E-value=22 Score=24.28 Aligned_cols=45 Identities=18% Similarity=0.090 Sum_probs=31.4
Q ss_pred EEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCC
Q psy4411 42 TITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGK 92 (99)
Q Consensus 42 ~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~ 92 (99)
||+++|-++ +..+++..+++.|.+|++..++ -.++..+.+.+.|.
T Consensus 2 ~I~iIG~G~---mG~~la~~l~~~g~~V~~~~~~---~~~~~~~~~~~~g~ 46 (264)
T 1i36_A 2 RVGFIGFGE---VAQTLASRLRSRGVEVVTSLEG---RSPSTIERARTVGV 46 (264)
T ss_dssp EEEEESCSH---HHHHHHHHHHHTTCEEEECCTT---CCHHHHHHHHHHTC
T ss_pred eEEEEechH---HHHHHHHHHHHCCCeEEEeCCc---cCHHHHHHHHHCCC
Confidence 789999654 9999999999999998885441 13445555544453
No 281
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=62.45 E-value=23 Score=22.57 Aligned_cols=38 Identities=21% Similarity=0.162 Sum_probs=28.7
Q ss_pred CCCcEEEEECCCCC-chhHHHHHHHHhhCCCEEEEECCC
Q psy4411 38 VNGLTITMVGDLKN-GRTVHSLARLLTLYDVKLNYVSPP 75 (99)
Q Consensus 38 l~g~~i~~vGd~~n-~rv~~Sl~~~~~~~G~~v~~~~P~ 75 (99)
++-++|+++|-..+ +++.+.++.-+...|.++.-+.|+
T Consensus 12 ~~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~ 50 (138)
T 1y81_A 12 KEFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPN 50 (138)
T ss_dssp --CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTT
T ss_pred cCCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCC
Confidence 56689999996332 458888888888889998888885
No 282
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=62.28 E-value=17 Score=25.35 Aligned_cols=38 Identities=13% Similarity=0.066 Sum_probs=31.4
Q ss_pred hcCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 35 MGRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 35 ~g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
..++.++++.+.|-..- +.+.++..++.-|.+|+++.-
T Consensus 20 ~~~l~~k~~lVTGas~G--IG~~ia~~la~~G~~V~~~~r 57 (281)
T 3v2h_A 20 FQSMMTKTAVITGSTSG--IGLAIARTLAKAGANIVLNGF 57 (281)
T ss_dssp --CCTTCEEEEETCSSH--HHHHHHHHHHHTTCEEEEECC
T ss_pred hhccCCCEEEEeCCCcH--HHHHHHHHHHHCCCEEEEEeC
Confidence 35688999999997654 999999999999999998864
No 283
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=62.27 E-value=30 Score=29.13 Aligned_cols=53 Identities=9% Similarity=-0.034 Sum_probs=39.6
Q ss_pred CcEEEEECCCCCchhHHHHHHHHhhCCC-EEEEECCCCC---CCCHHHHHHHHhcCCeEE
Q psy4411 40 GLTITMVGDLKNGRTVHSLARLLTLYDV-KLNYVSPPNL---GMPESIQEFVASKGKQQE 95 (99)
Q Consensus 40 g~~i~~vGd~~n~rv~~Sl~~~~~~~G~-~v~~~~P~~~---~~~~~~~~~a~~~g~~~~ 95 (99)
+.+|++||-++ ++-.++..+.++|. +|+++..... ...+..++.+++.|+.+.
T Consensus 332 ~~~VvVIGgG~---~g~e~A~~~~~~G~~~Vtvv~r~~~~~~~~~~~e~~~~~~~Gv~~~ 388 (1025)
T 1gte_A 332 RGAVIVLGAGD---TAFDCATSALRCGARRVFLVFRKGFVNIRAVPEEVELAKEEKCEFL 388 (1025)
T ss_dssp CSEEEEECSSH---HHHHHHHHHHHTTCSEEEEECSSCGGGCCSCHHHHHHHHHTTCEEE
T ss_pred CCcEEEECCCh---HHHHHHHHHHHcCCCEEEEEEecChhhCCCCHHHHHHHHHcCCEEE
Confidence 45999999864 88888889999997 8999987542 222444567888887763
No 284
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=61.82 E-value=9.9 Score=27.13 Aligned_cols=29 Identities=17% Similarity=0.166 Sum_probs=26.3
Q ss_pred cEEEEECCCCCchhHHHHHHHHhhCCCEEEEE
Q psy4411 41 LTITMVGDLKNGRTVHSLARLLTLYDVKLNYV 72 (99)
Q Consensus 41 ~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~ 72 (99)
+||++||-+. +.-+++..+++.|.+|+++
T Consensus 2 m~V~IVGaGp---aGl~~A~~L~~~G~~v~v~ 30 (412)
T 4hb9_A 2 MHVGIIGAGI---GGTCLAHGLRKHGIKVTIY 30 (412)
T ss_dssp CEEEEECCSH---HHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECcCH---HHHHHHHHHHhCCCCEEEE
Confidence 6899999876 8889999999999999998
No 285
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=61.80 E-value=19 Score=26.08 Aligned_cols=44 Identities=16% Similarity=-0.020 Sum_probs=33.9
Q ss_pred cEEEEECCCCCchhHHHHHHHHhhCCC--EEEEECCCCCCCCHHHHHHHHhcCC
Q psy4411 41 LTITMVGDLKNGRTVHSLARLLTLYDV--KLNYVSPPNLGMPESIQEFVASKGK 92 (99)
Q Consensus 41 ~~i~~vGd~~n~rv~~Sl~~~~~~~G~--~v~~~~P~~~~~~~~~~~~a~~~g~ 92 (99)
.||++||-+ ++..|++..+.+.|. +|++..+ +++-.+.+++.|.
T Consensus 34 ~kI~IIG~G---~mG~slA~~l~~~G~~~~V~~~dr-----~~~~~~~a~~~G~ 79 (314)
T 3ggo_A 34 QNVLIVGVG---FMGGSFAKSLRRSGFKGKIYGYDI-----NPESISKAVDLGI 79 (314)
T ss_dssp SEEEEESCS---HHHHHHHHHHHHTTCCSEEEEECS-----CHHHHHHHHHTTS
T ss_pred CEEEEEeeC---HHHHHHHHHHHhCCCCCEEEEEEC-----CHHHHHHHHHCCC
Confidence 799999954 399999999999998 8877554 4555666666664
No 286
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=61.72 E-value=13 Score=25.70 Aligned_cols=57 Identities=9% Similarity=0.124 Sum_probs=35.6
Q ss_pred CCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCeEEE
Q psy4411 38 VNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQQEV 96 (99)
Q Consensus 38 l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~~~ 96 (99)
.+++++.+.|-.. .+...++..+++.|.+|.+..-..-+..+.+.+.+++.+.++..
T Consensus 24 ~~~k~vlITGas~--gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (272)
T 4e3z_A 24 SDTPVVLVTGGSR--GIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVA 80 (272)
T ss_dssp CCSCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEE
T ss_pred cCCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEE
Confidence 4567777778655 49999999999999999776322211122333444444554443
No 287
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=61.68 E-value=20 Score=24.82 Aligned_cols=44 Identities=16% Similarity=-0.021 Sum_probs=32.4
Q ss_pred cEEEEECCCCCchhHHHHHHHHhhCCC--EEEEECCCCCCCCHHHHHHHHhcCC
Q psy4411 41 LTITMVGDLKNGRTVHSLARLLTLYDV--KLNYVSPPNLGMPESIQEFVASKGK 92 (99)
Q Consensus 41 ~~i~~vGd~~n~rv~~Sl~~~~~~~G~--~v~~~~P~~~~~~~~~~~~a~~~g~ 92 (99)
.+|+++|-++ +..+++..+...|. +|++..+ +++-.+.+++.|.
T Consensus 2 ~~I~iIG~G~---mG~~~a~~l~~~g~~~~V~~~d~-----~~~~~~~~~~~g~ 47 (281)
T 2g5c_A 2 QNVLIVGVGF---MGGSFAKSLRRSGFKGKIYGYDI-----NPESISKAVDLGI 47 (281)
T ss_dssp CEEEEESCSH---HHHHHHHHHHHTTCCSEEEEECS-----CHHHHHHHHHTTS
T ss_pred cEEEEEecCH---HHHHHHHHHHhcCCCcEEEEEeC-----CHHHHHHHHHCCC
Confidence 4799999643 99999999999997 8777654 4455555666664
No 288
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=61.62 E-value=18 Score=24.42 Aligned_cols=36 Identities=11% Similarity=0.090 Sum_probs=30.7
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
+++++++.+.|-... +.+.++..++.-|.+|+++.-
T Consensus 10 ~l~~k~vlItGasgg--iG~~la~~l~~~G~~V~~~~r 45 (260)
T 3awd_A 10 RLDNRVAIVTGGAQN--IGLACVTALAEAGARVIIADL 45 (260)
T ss_dssp CCTTCEEEEETTTSH--HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCEEEEeCCCch--HHHHHHHHHHHCCCEEEEEeC
Confidence 478899999997654 999999999999999988764
No 289
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=61.25 E-value=17 Score=25.12 Aligned_cols=38 Identities=16% Similarity=0.244 Sum_probs=31.5
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
+|+|+++.+.|-....-+.+..+..+++.|.+|.++.=
T Consensus 3 ~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r 40 (256)
T 4fs3_A 3 NLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYR 40 (256)
T ss_dssp CCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEEC
Confidence 68999999999643224899999999999999998864
No 290
>3aek_B Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_B* 3aer_B 3aes_B* 3aeu_B 3aet_B
Probab=60.73 E-value=7.6 Score=30.50 Aligned_cols=36 Identities=17% Similarity=0.148 Sum_probs=29.8
Q ss_pred cCCCCcEEEEECCCCCchhHHHHHHHH-hhCCCEEEEECC
Q psy4411 36 GRVNGLTITMVGDLKNGRTVHSLARLL-TLYDVKLNYVSP 74 (99)
Q Consensus 36 g~l~g~~i~~vGd~~n~rv~~Sl~~~~-~~~G~~v~~~~P 74 (99)
..+.|+++++.||.. .+.++...+ .-+||+++.++-
T Consensus 276 ~~l~GKrv~i~gd~~---~~~~la~~L~~ElGm~vv~~gt 312 (525)
T 3aek_B 276 TYLTGKRVFIFGDGT---HVIAAARIAAKEVGFEVVGMGC 312 (525)
T ss_dssp GGGTTCEEEECSSHH---HHHHHHHHHHHTTCCEEEEEEE
T ss_pred hhcCCCEEEEEcCch---HHHHHHHHHHHHcCCeeEEEec
Confidence 568999999999965 678999988 689999877653
No 291
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=60.48 E-value=18 Score=24.71 Aligned_cols=39 Identities=10% Similarity=-0.014 Sum_probs=31.6
Q ss_pred cCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 36 GRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 36 g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
.+++|+++.+.|-..++-+...++..++..|.++.+++-
T Consensus 16 ~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~ 54 (267)
T 3gdg_A 16 LSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYA 54 (267)
T ss_dssp HCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBS
T ss_pred cCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeC
Confidence 358899999999762124999999999999999988764
No 292
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=60.39 E-value=18 Score=25.56 Aligned_cols=37 Identities=11% Similarity=0.074 Sum_probs=31.8
Q ss_pred cCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 36 GRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 36 g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
.+++|+++.+.|-..- +.+.++..++..|.+|++++-
T Consensus 27 ~~l~gk~vlVTGas~g--IG~~la~~l~~~G~~V~~~~r 63 (301)
T 3tjr_A 27 SGFDGRAAVVTGGASG--IGLATATEFARRGARLVLSDV 63 (301)
T ss_dssp CCSTTCEEEEETTTSH--HHHHHHHHHHHTTCEEEEEES
T ss_pred hccCCCEEEEeCCCCH--HHHHHHHHHHHCCCEEEEEEC
Confidence 3588999999998654 999999999999999988864
No 293
>2gi4_A Possible phosphotyrosine protein phosphatase; low molecular weight, protein tyrosine phosphatase, bacterial phosphatase; NMR {Campylobacter jejuni}
Probab=60.31 E-value=26 Score=22.88 Aligned_cols=54 Identities=11% Similarity=0.070 Sum_probs=33.9
Q ss_pred EEEEECCCC--CchhHHHHHHHHhh---C--CCEEEEECCCCC----CCCHHHHHHHHhcCCeEE
Q psy4411 42 TITMVGDLK--NGRTVHSLARLLTL---Y--DVKLNYVSPPNL----GMPESIQEFVASKGKQQE 95 (99)
Q Consensus 42 ~i~~vGd~~--n~rv~~Sl~~~~~~---~--G~~v~~~~P~~~----~~~~~~~~~a~~~g~~~~ 95 (99)
+|.||.-+| .|+++-.++.-... + ...+.-++-..| .+++..++.+++.|++++
T Consensus 3 ~VLFVC~gNicRSpmAEai~~~~~~~~gl~~~~~v~SAGt~~~~~g~~~~~~a~~~l~~~Gid~s 67 (156)
T 2gi4_A 3 KILFICLGNICRSPMAEFIMKDLVKKANLEKEFFINSAGTSGEHDGEGMHYGTKNKLAQLNIEHK 67 (156)
T ss_dssp EEEEECSSCSSHHHHHHHHHHHHHHHHTTTTTCEEEEEBSSCSSTTCCCCHHHHHHHHHTSCSCC
T ss_pred EEEEEeCCCHHHHHHHHHHHHHHHHhCCCCCcEEEEeeecCCcccCCCCCHHHHHHHHHcCCCcc
Confidence 788887654 23344444443332 1 256777765543 688888999999998764
No 294
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=60.29 E-value=30 Score=26.29 Aligned_cols=54 Identities=19% Similarity=0.178 Sum_probs=38.7
Q ss_pred CcEEEEECCCCCchhHHHHHHHHhhC---CCEEEEECCCCCC---CCHHH----HHHHHhcCCeEEE
Q psy4411 40 GLTITMVGDLKNGRTVHSLARLLTLY---DVKLNYVSPPNLG---MPESI----QEFVASKGKQQEV 96 (99)
Q Consensus 40 g~~i~~vGd~~n~rv~~Sl~~~~~~~---G~~v~~~~P~~~~---~~~~~----~~~a~~~g~~~~~ 96 (99)
+++++++|.+. +.--++..++.+ |.+|+++.+...- +++++ .+.+++.|+++..
T Consensus 191 ~~~vvViGgG~---ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~ 254 (495)
T 2wpf_A 191 PRRVLTVGGGF---ISVEFAGIFNAYKPPGGKVTLCYRNNLILRGFDETIREEVTKQLTANGIEIMT 254 (495)
T ss_dssp CSEEEEECSSH---HHHHHHHHHHHHCCTTCEEEEEESSSSSCTTSCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCeEEEECCCH---HHHHHHHHHHhhCCCCCeEEEEEcCCccccccCHHHHHHHHHHHHhCCCEEEe
Confidence 57999999865 777888888899 9999999874332 34444 3446677877643
No 295
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=59.91 E-value=19 Score=24.82 Aligned_cols=37 Identities=16% Similarity=0.029 Sum_probs=31.3
Q ss_pred cCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 36 GRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 36 g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
.+++++++.+.|-.. .+...++..++..|.+|+++.-
T Consensus 27 ~~l~~k~vlITGasg--gIG~~la~~L~~~G~~V~~~~r 63 (272)
T 1yb1_A 27 KSVTGEIVLITGAGH--GIGRLTAYEFAKLKSKLVLWDI 63 (272)
T ss_dssp CCCTTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEES
T ss_pred cccCCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEEc
Confidence 358889999999755 4999999999999999888764
No 296
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=59.90 E-value=15 Score=25.73 Aligned_cols=31 Identities=10% Similarity=0.003 Sum_probs=26.5
Q ss_pred cEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 41 LTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 41 ~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
.||+++|-++ +..+++..+++.|.+|++..+
T Consensus 2 ~~i~iIG~G~---mG~~~a~~l~~~G~~V~~~dr 32 (287)
T 3pef_A 2 QKFGFIGLGI---MGSAMAKNLVKAGCSVTIWNR 32 (287)
T ss_dssp CEEEEECCSH---HHHHHHHHHHHTTCEEEEECS
T ss_pred CEEEEEeecH---HHHHHHHHHHHCCCeEEEEcC
Confidence 5899999754 999999999999999987655
No 297
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=59.75 E-value=32 Score=23.48 Aligned_cols=37 Identities=8% Similarity=0.012 Sum_probs=31.2
Q ss_pred cCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 36 GRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 36 g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
.+++++++.+.|-... +.+.++..++.-|.+|+++.-
T Consensus 30 ~~l~~k~vlITGasgg--IG~~la~~L~~~G~~V~~~~r 66 (279)
T 3ctm_A 30 FSLKGKVASVTGSSGG--IGWAVAEAYAQAGADVAIWYN 66 (279)
T ss_dssp GCCTTCEEEETTTTSS--HHHHHHHHHHHHTCEEEEEES
T ss_pred cCCCCCEEEEECCCcH--HHHHHHHHHHHCCCEEEEEeC
Confidence 3588899999998665 999999999999999988764
No 298
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=59.70 E-value=13 Score=27.43 Aligned_cols=35 Identities=9% Similarity=0.107 Sum_probs=30.4
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
.+.+.+++++|-+ ++.+..+..+..+|++|+++.+
T Consensus 163 ~l~~~~V~ViGaG---~iG~~~a~~l~~~Ga~V~~~d~ 197 (369)
T 2eez_A 163 GVAPASVVILGGG---TVGTNAAKIALGMGAQVTILDV 197 (369)
T ss_dssp BBCCCEEEEECCS---HHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCEEEEECCC---HHHHHHHHHHHhCCCEEEEEEC
Confidence 4788999999973 5999999999999999888765
No 299
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=59.53 E-value=19 Score=25.99 Aligned_cols=53 Identities=15% Similarity=0.088 Sum_probs=38.2
Q ss_pred cEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHH---HHHHhcCCeE
Q psy4411 41 LTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQ---EFVASKGKQQ 94 (99)
Q Consensus 41 ~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~---~~a~~~g~~~ 94 (99)
.-++++|.+|||-=.--.+..+...|.+|.++.|.. ...++.. +.+++.|+.+
T Consensus 81 ~VlVlcG~GNNGGDGlv~AR~L~~~G~~V~V~~~~~-~~~~~~~~~~~~~~~~g~~~ 136 (265)
T 2o8n_A 81 TVLVICGPGNNGGDGLVCARHLKLFGYQPTIYYPKR-PNKPLFTGLVTQCQKMDIPF 136 (265)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHHHTTCEEEEECCSC-CSSHHHHHHHHHHHHTTCCB
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHCCCcEEEEEeCC-CCCHHHHHHHHHHHHcCCcE
Confidence 445788999998877888888888999999988865 4445443 3445566554
No 300
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=59.14 E-value=12 Score=25.97 Aligned_cols=36 Identities=8% Similarity=-0.017 Sum_probs=31.2
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
.++|+++.+.|-.. -+.+.++..++.-|.+|+++.-
T Consensus 24 ~l~~k~~lVTGas~--GIG~aia~~l~~~G~~V~~~~r 59 (277)
T 4fc7_A 24 LLRDKVAFITGGGS--GIGFRIAEIFMRHGCHTVIASR 59 (277)
T ss_dssp TTTTCEEEEETTTS--HHHHHHHHHHHTTTCEEEEEES
T ss_pred ccCCCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeC
Confidence 48899999999865 4999999999999999998864
No 301
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=58.90 E-value=7.6 Score=23.57 Aligned_cols=35 Identities=17% Similarity=0.154 Sum_probs=27.1
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
.+++.+|+++|- . ++...++..+...|.+++++.+
T Consensus 3 ~~~~~~v~I~G~-G--~iG~~~a~~l~~~g~~v~~~d~ 37 (144)
T 2hmt_A 3 RIKNKQFAVIGL-G--RFGGSIVKELHRMGHEVLAVDI 37 (144)
T ss_dssp ---CCSEEEECC-S--HHHHHHHHHHHHTTCCCEEEES
T ss_pred CCcCCcEEEECC-C--HHHHHHHHHHHHCCCEEEEEeC
Confidence 356678999995 3 5999999999999998888764
No 302
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=58.76 E-value=27 Score=22.24 Aligned_cols=37 Identities=19% Similarity=0.189 Sum_probs=29.0
Q ss_pred CcEEEEECCCCC-chhHHHHHHHHhhCCCEEEEECCCC
Q psy4411 40 GLTITMVGDLKN-GRTVHSLARLLTLYDVKLNYVSPPN 76 (99)
Q Consensus 40 g~~i~~vGd~~n-~rv~~Sl~~~~~~~G~~v~~~~P~~ 76 (99)
-.+|++||-..+ ++..+.++..+...|.++.-+.|+.
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~v~~Vnp~~ 59 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKY 59 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTC
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHCCCEEEEECCCC
Confidence 579999997533 4578888888888899988888853
No 303
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=58.76 E-value=38 Score=23.48 Aligned_cols=32 Identities=16% Similarity=0.040 Sum_probs=26.0
Q ss_pred CcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 40 GLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 40 g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
..+|+++|-++ +...++..+...|.+|++..+
T Consensus 4 ~~~i~iiG~G~---~G~~~a~~l~~~g~~V~~~~~ 35 (301)
T 3cky_A 4 SIKIGFIGLGA---MGKPMAINLLKEGVTVYAFDL 35 (301)
T ss_dssp CCEEEEECCCT---THHHHHHHHHHTTCEEEEECS
T ss_pred CCEEEEECccH---HHHHHHHHHHHCCCeEEEEeC
Confidence 36899999654 889999999899999887654
No 304
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=58.71 E-value=19 Score=25.62 Aligned_cols=47 Identities=9% Similarity=0.063 Sum_probs=33.8
Q ss_pred CCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCC
Q psy4411 38 VNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGK 92 (99)
Q Consensus 38 l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~ 92 (99)
....+|+++|-++ +..+++..+.+.|.+|++.. .+++-.+.+.+.|.
T Consensus 7 ~~~~~IgiIG~G~---mG~~~A~~l~~~G~~V~~~d-----r~~~~~~~~~~~g~ 53 (306)
T 3l6d_A 7 SFEFDVSVIGLGA---MGTIMAQVLLKQGKRVAIWN-----RSPGKAAALVAAGA 53 (306)
T ss_dssp CCSCSEEEECCSH---HHHHHHHHHHHTTCCEEEEC-----SSHHHHHHHHHHTC
T ss_pred cCCCeEEEECCCH---HHHHHHHHHHHCCCEEEEEe-----CCHHHHHHHHHCCC
Confidence 4567899999754 99999999999999988764 34444444444443
No 305
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=58.44 E-value=9.3 Score=30.20 Aligned_cols=34 Identities=15% Similarity=0.190 Sum_probs=29.5
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEEC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVS 73 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~ 73 (99)
.+.|+++++.||+. -+.+++.++.-+||+++.++
T Consensus 332 ~l~GKrv~i~~~~~---~~~~l~~~l~ElGm~vv~~~ 365 (533)
T 1mio_A 332 KLQGKTACLYVGGS---RSHTYMNMLKSFGVDSLVAG 365 (533)
T ss_dssp HHTTCEEEEEESSS---HHHHHHHHHHHHTCEEEEEE
T ss_pred HhCCCEEEEECCch---HHHHHHHHHHHCCCEEEEEE
Confidence 58999999999975 67888888889999998885
No 306
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=58.36 E-value=33 Score=25.66 Aligned_cols=47 Identities=13% Similarity=0.173 Sum_probs=35.6
Q ss_pred CcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCC----CHHHHHHHHh
Q psy4411 40 GLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGM----PESIQEFVAS 89 (99)
Q Consensus 40 g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~----~~~~~~~a~~ 89 (99)
+++++++|.+. +.-.++..++++|.+|+++.+....+ ++++.+.+++
T Consensus 172 ~~~vvViGgG~---~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~d~~~~~~l~~ 222 (466)
T 3l8k_A 172 PQDMVIIGAGY---IGLEIASIFRLMGVQTHIIEMLDRALITLEDQDIVNTLLS 222 (466)
T ss_dssp CSEEEEECCSH---HHHHHHHHHHHTTCEEEEECSSSSSCTTSCCHHHHHHHHH
T ss_pred CCeEEEECCCH---HHHHHHHHHHHcCCEEEEEEeCCcCCCCCCCHHHHHHHHh
Confidence 57999999854 78888999999999999998743222 6676666543
No 307
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=58.32 E-value=25 Score=22.16 Aligned_cols=56 Identities=14% Similarity=0.137 Sum_probs=34.5
Q ss_pred HHHhcCCCCcEEEEE-CCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCeE
Q psy4411 32 KEEMGRVNGLTITMV-GDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQQ 94 (99)
Q Consensus 32 ~e~~g~l~g~~i~~v-Gd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~ 94 (99)
.+++..-+| .+.++ ||-. .+++.++...+....+++ .|++|++++++.|++.|..+
T Consensus 45 ~~~~~~~~~-~l~I~~G~r~-----~~~l~a~~~~~~~~iIlt-~g~~~~~~i~~~A~~~~ipv 101 (139)
T 2ioj_A 45 LRYLREARN-AALVTGGDRS-----DLLLTALEMPNVRCLILT-GNLEPVQLVLTKAEERGVPV 101 (139)
T ss_dssp HHHHHTCSS-EEEEEETTCH-----HHHHHHTTCTTEEEEEEE-TTCCCCHHHHHHHHHHTCCE
T ss_pred HHHHhcCCC-EEEEEcCCHH-----HHHHHHHhCCCCcEEEEc-CCCCCCHHHHHHHHHCCCeE
Confidence 344433233 68888 8833 333322222455544444 48889999999999998776
No 308
>2o2e_A Tryptophan synthase beta chain; amino-acid biosynthesis, tryptophan biosynthesis, structural genomics; 2.20A {Mycobacterium tuberculosis} PDB: 2o2j_A
Probab=58.26 E-value=8.3 Score=29.36 Aligned_cols=52 Identities=10% Similarity=-0.087 Sum_probs=36.1
Q ss_pred EEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCC--HHHHHHHHhcCCeEEEEe
Q psy4411 43 ITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMP--ESIQEFVASKGKQQEVYE 98 (99)
Q Consensus 43 i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~--~~~~~~a~~~g~~~~~~~ 98 (99)
|+-.|.+| ...+++.+|+++|++++++-|+. .++ +.-+..++..|+++...+
T Consensus 133 I~~~ssGN---hG~A~A~aaa~~G~~~~I~mp~~-~~~~q~~kv~~~~~~GA~Vv~v~ 186 (422)
T 2o2e_A 133 IAETGAGQ---HGVATATACALLGLDCVIYMGGI-DTARQALNVARMRLLGAEVVAVQ 186 (422)
T ss_dssp EEEESSSH---HHHHHHHHHHHHTCEEEEEEEHH-HHHHSHHHHHHHHHTTCEEEEEC
T ss_pred EEecCccH---HHHHHHHHHHHcCCcEEEEeCCC-cchhhHHHHHHHHHCCCEEEEEC
Confidence 33345543 89999999999999999999964 111 112345677888887654
No 309
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=58.25 E-value=36 Score=24.00 Aligned_cols=46 Identities=11% Similarity=-0.030 Sum_probs=34.9
Q ss_pred CcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCe
Q psy4411 40 GLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQ 93 (99)
Q Consensus 40 g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~ 93 (99)
..||+++|-++ +..+++..+++.|.+|++.. .+++-.+.+.+.|..
T Consensus 7 ~~~I~iIG~G~---mG~~~a~~l~~~G~~V~~~d-----r~~~~~~~~~~~g~~ 52 (303)
T 3g0o_A 7 DFHVGIVGLGS---MGMGAARSCLRAGLSTWGAD-----LNPQACANLLAEGAC 52 (303)
T ss_dssp CCEEEEECCSH---HHHHHHHHHHHTTCEEEEEC-----SCHHHHHHHHHTTCS
T ss_pred CCeEEEECCCH---HHHHHHHHHHHCCCeEEEEE-----CCHHHHHHHHHcCCc
Confidence 36899999754 99999999999999988764 455666666666654
No 310
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=58.11 E-value=20 Score=25.54 Aligned_cols=54 Identities=26% Similarity=0.224 Sum_probs=36.6
Q ss_pred cEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHH---HHHHhcCCeE
Q psy4411 41 LTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQ---EFVASKGKQQ 94 (99)
Q Consensus 41 ~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~---~~a~~~g~~~ 94 (99)
.-++++|.+|||-=.--.+..+...|.+|.++.|..-+..++.. +.++..|+.+
T Consensus 87 ~vlVlcG~GNNGGDGlv~AR~L~~~G~~V~v~~~~~~~~~~~a~~~~~~~~~~g~~~ 143 (259)
T 3d3k_A 87 TVALLCGPHVKGAQGISCGRHLANHDVQVILFLPNFVKMLESITNELSLFSKTQGQQ 143 (259)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHHHTTCEEEEECCBCSSCCHHHHHHHHHHTTSSCEE
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHCCCeEEEEEecCCCCCHHHHHHHHHHHHcCCCc
Confidence 34578899999887778888888899999998774322334432 2334556554
No 311
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=57.81 E-value=15 Score=27.29 Aligned_cols=44 Identities=16% Similarity=-0.017 Sum_probs=33.6
Q ss_pred cEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCC
Q psy4411 41 LTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGK 92 (99)
Q Consensus 41 ~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~ 92 (99)
.||+++|=++ +..|++..+.+.|.+|+...+ +++..+.+++.|.
T Consensus 9 ~kIgIIG~G~---mG~slA~~L~~~G~~V~~~dr-----~~~~~~~a~~~G~ 52 (341)
T 3ktd_A 9 RPVCILGLGL---IGGSLLRDLHAANHSVFGYNR-----SRSGAKSAVDEGF 52 (341)
T ss_dssp SCEEEECCSH---HHHHHHHHHHHTTCCEEEECS-----CHHHHHHHHHTTC
T ss_pred CEEEEEeecH---HHHHHHHHHHHCCCEEEEEeC-----CHHHHHHHHHcCC
Confidence 5899999643 999999999999998877654 4555566666665
No 312
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=57.67 E-value=40 Score=25.33 Aligned_cols=53 Identities=17% Similarity=0.148 Sum_probs=37.7
Q ss_pred CcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCC---CCHHHH----HHHHhcCCeEE
Q psy4411 40 GLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLG---MPESIQ----EFVASKGKQQE 95 (99)
Q Consensus 40 g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~---~~~~~~----~~a~~~g~~~~ 95 (99)
+++++++|.+. +.-.++..++.+|.+++++.+.... +++++. +.+++.|+++.
T Consensus 191 ~~~v~ViGgG~---~g~e~A~~l~~~g~~Vtli~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~ 250 (484)
T 3o0h_A 191 PKSIVIVGGGY---IGVEFANIFHGLGVKTTLLHRGDLILRNFDYDLRQLLNDAMVAKGISII 250 (484)
T ss_dssp CSEEEEECCSH---HHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEE
T ss_pred CCcEEEECcCH---HHHHHHHHHHHcCCeEEEEECCCccccccCHHHHHHHHHHHHHCCCEEE
Confidence 67999999754 7778888889999999999874321 344443 44566777654
No 313
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=57.64 E-value=11 Score=23.81 Aligned_cols=28 Identities=21% Similarity=0.184 Sum_probs=24.7
Q ss_pred EEEEECCCCCchhHHHHHHHHhhCCCEEEEE
Q psy4411 42 TITMVGDLKNGRTVHSLARLLTLYDVKLNYV 72 (99)
Q Consensus 42 ~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~ 72 (99)
.|++||-+. ..=+++..+++.|.+|+++
T Consensus 4 dV~IIGaGp---aGL~aA~~La~~G~~V~v~ 31 (336)
T 3kkj_A 4 PIAIIGTGI---AGLSAAQALTAAGHQVHLF 31 (336)
T ss_dssp CEEEECCSH---HHHHHHHHHHHTTCCEEEE
T ss_pred CEEEECcCH---HHHHHHHHHHHCCCCEEEE
Confidence 489999876 7889999999999999987
No 314
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=57.56 E-value=30 Score=23.41 Aligned_cols=39 Identities=21% Similarity=0.267 Sum_probs=32.1
Q ss_pred cCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 36 GRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 36 g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
..++++++.+.|-..++.+.+.++..+++.|.+|.++.-
T Consensus 10 ~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r 48 (271)
T 3ek2_A 10 GFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYV 48 (271)
T ss_dssp CTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEES
T ss_pred cccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEec
Confidence 458899999999762234999999999999999988864
No 315
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=57.41 E-value=8.7 Score=30.00 Aligned_cols=35 Identities=6% Similarity=-0.055 Sum_probs=29.8
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
.+.|+++++.||+. -+.+++.++.-+||+++.++-
T Consensus 345 ~l~GKrv~i~g~~~---~~~~la~~L~ElGm~vv~~gt 379 (492)
T 3u7q_A 345 RLEGKRVMLYIGGL---RPRHVIGAYEDLGMEVVGTGY 379 (492)
T ss_dssp HHTTCEEEECBSSS---HHHHTHHHHHTTTCEEEEEEE
T ss_pred HhCCCEEEEECCCc---hHHHHHHHHHHCCCEEEEEeC
Confidence 48999999999965 578888888899999988664
No 316
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=57.38 E-value=7.8 Score=30.57 Aligned_cols=34 Identities=18% Similarity=0.214 Sum_probs=28.9
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEEC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVS 73 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~ 73 (99)
.+.|+++++.||.. -+.|++..+.-+||+++.+.
T Consensus 361 ~l~GKrvaI~gd~~---~~~~la~fL~elGm~vv~v~ 394 (523)
T 3u7q_B 361 WLHGKRFALWGDPD---FVMGLVKFLLELGCEPVHIL 394 (523)
T ss_dssp HHTTCEEEEECSHH---HHHHHHHHHHHTTCEEEEEE
T ss_pred hcCCCEEEEECCch---HHHHHHHHHHHcCCEEEEEE
Confidence 48899999999854 67889998999999988775
No 317
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=57.38 E-value=30 Score=25.81 Aligned_cols=53 Identities=13% Similarity=0.114 Sum_probs=38.3
Q ss_pred CcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCC---CCCHHHH----HHHHhcCCeEE
Q psy4411 40 GLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNL---GMPESIQ----EFVASKGKQQE 95 (99)
Q Consensus 40 g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~---~~~~~~~----~~a~~~g~~~~ 95 (99)
+++++++|.+. +.-.++..++.+|.+++++.+... .+++++. +.+++.|+++.
T Consensus 170 ~~~v~ViGgG~---~g~e~A~~l~~~g~~Vt~v~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~ 229 (463)
T 4dna_A 170 PESILIAGGGY---IAVEFANIFHGLGVKTTLIYRGKEILSRFDQDMRRGLHAAMEEKGIRIL 229 (463)
T ss_dssp CSEEEEECCSH---HHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEE
T ss_pred CCeEEEECCCH---HHHHHHHHHHHcCCeEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEE
Confidence 67999999754 777888888999999999987432 2345543 34567787764
No 318
>2o0b_A 3-phosphoshikimate 1-carboxyvinyltransferase; shikimate pathway, EPSP synthase, structural genomics; HET: S3P; 1.15A {Mycobacterium tuberculosis} PDB: 2o0d_A* 2o0e_A* 2o0x_A* 2o0z_A* 2o15_A 2bjb_A
Probab=57.18 E-value=19 Score=27.68 Aligned_cols=84 Identities=12% Similarity=0.064 Sum_probs=51.2
Q ss_pred HHHHHHHHhhc-cCEEEEccCCchhH-HHHhcCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEEC--CCCCCCCHH
Q psy4411 7 LIDTVAVLSGY-ADVIVLRHPEPGAV-KEEMGRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVS--PPNLGMPES 82 (99)
Q Consensus 7 ~~Dta~vls~y-~D~iv~R~~~~~~~-~e~~g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~--P~~~~~~~~ 82 (99)
+.+|+++|..| +++- ......+ .+. +.+++..+.+.||.. -+-.|+.+++..+-++++-. |...+.++.
T Consensus 200 i~~t~~~L~~~Ga~I~---~~~~~~i~I~g-~~l~g~~~~v~~D~s---~A~~~laaaa~~~g~v~i~~v~~~~~q~~~~ 272 (450)
T 2o0b_A 200 IAMTAAMLRQAGVDID---DSTPNRWQVRP-GPVAARRWDIEPDLT---NAVAFLSAAVVSGGTVRITGWPRVSVQPADH 272 (450)
T ss_dssp HHHHHHHHHHTTCCEE---CCSTTEEEECC-CCCCCCCEECCBCHH---HHHHHHHHHHHHTCEEEETTCCSSCSSCHHH
T ss_pred HHHHHHHHHHCCCeEE---ecCCcEEEEEC-CCCcCceEEcCCCHH---HHHHHHHHHHhcCCeEEECCCCcccccchHH
Confidence 56888999998 4542 1111112 121 357777777778855 34445555555576666543 444444456
Q ss_pred HHHHHHhcCCeEEEE
Q psy4411 83 IQEFVASKGKQQEVY 97 (99)
Q Consensus 83 ~~~~a~~~g~~~~~~ 97 (99)
+++.+++.|+++++.
T Consensus 273 i~~~L~~mGa~i~~~ 287 (450)
T 2o0b_A 273 ILAILRQLNAVVIHA 287 (450)
T ss_dssp HHHHHHHTTCEEEEE
T ss_pred HHHHHHHcCCeEEEc
Confidence 889999999998864
No 319
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=57.05 E-value=19 Score=24.56 Aligned_cols=38 Identities=11% Similarity=-0.008 Sum_probs=31.2
Q ss_pred hcCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 35 MGRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 35 ~g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
...++|+++.+.|-.. .+.+.++..++.-|.+|+++.-
T Consensus 9 ~~~l~~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r 46 (260)
T 2zat_A 9 RKPLENKVALVTASTD--GIGLAIARRLAQDGAHVVVSSR 46 (260)
T ss_dssp -CTTTTCEEEESSCSS--HHHHHHHHHHHHTTCEEEEEES
T ss_pred ccCCCCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeC
Confidence 3468889999999755 4999999999999999988754
No 320
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=56.92 E-value=12 Score=25.77 Aligned_cols=34 Identities=9% Similarity=0.012 Sum_probs=27.9
Q ss_pred CCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEEC
Q psy4411 38 VNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVS 73 (99)
Q Consensus 38 l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~ 73 (99)
++++++.+.|-.. -+.+.++..+++.|.+|.++.
T Consensus 23 ~~~k~vlITGas~--gIG~~~a~~l~~~G~~v~~~~ 56 (269)
T 3gk3_A 23 QAKRVAFVTGGMG--GLGAAISRRLHDAGMAVAVSH 56 (269)
T ss_dssp -CCCEEEETTTTS--HHHHHHHHHHHTTTCEEEEEE
T ss_pred hcCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEc
Confidence 6777888888755 499999999999999998876
No 321
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=56.54 E-value=24 Score=25.86 Aligned_cols=54 Identities=26% Similarity=0.224 Sum_probs=37.1
Q ss_pred cEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHH---HHHHhcCCeE
Q psy4411 41 LTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQ---EFVASKGKQQ 94 (99)
Q Consensus 41 ~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~---~~a~~~g~~~ 94 (99)
.-++++|.+|||-=.-..+..+...|.+|.++.|..-+..++.. +.++..|+.+
T Consensus 134 ~vlVlcG~GNNGGDGlv~AR~L~~~G~~V~V~~~~~~~~~~~a~~~~~~~~~~g~~~ 190 (306)
T 3d3j_A 134 TVALLCGPHVKGAQGISCGRHLANHDVQVILFLPNFVKMLESITNELSLFSKTQGQQ 190 (306)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHHHTTCEEEEECCCCSSCCHHHHHHHHHHHTSSCEE
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHCCCcEEEEEecCCCCCHHHHHHHHHHHHcCCcc
Confidence 34578899999887788888888899999998875323334432 3344556654
No 322
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=56.54 E-value=29 Score=26.35 Aligned_cols=53 Identities=11% Similarity=0.123 Sum_probs=38.1
Q ss_pred CcEEEEECCCCCchhHHHHHHHHhhC---CCEEEEECCCCCC---CCHHH----HHHHHhcCCeEE
Q psy4411 40 GLTITMVGDLKNGRTVHSLARLLTLY---DVKLNYVSPPNLG---MPESI----QEFVASKGKQQE 95 (99)
Q Consensus 40 g~~i~~vGd~~n~rv~~Sl~~~~~~~---G~~v~~~~P~~~~---~~~~~----~~~a~~~g~~~~ 95 (99)
+++++++|.+. +.-.++..++.+ |.+|+++.+...- +++++ .+.+++.|+++.
T Consensus 187 ~~~vvViGgG~---ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~ 249 (490)
T 1fec_A 187 PKRALCVGGGY---ISIEFAGIFNAYKARGGQVDLAYRGDMILRGFDSELRKQLTEQLRANGINVR 249 (490)
T ss_dssp CSEEEEECSSH---HHHHHHHHHHHHSCTTCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTEEEE
T ss_pred CCeEEEECCCH---HHHHHHHHHHhhccCcCeEEEEEcCCCcccccCHHHHHHHHHHHHhCCCEEE
Confidence 57999999764 777888888999 9999999875432 34444 344567776664
No 323
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=56.25 E-value=27 Score=24.06 Aligned_cols=36 Identities=14% Similarity=0.181 Sum_probs=31.0
Q ss_pred cCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEEC
Q psy4411 36 GRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVS 73 (99)
Q Consensus 36 g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~ 73 (99)
.+++|+++.+.|-.. -+...++..++.-|.+|.++.
T Consensus 7 ~~l~~k~~lVTGas~--GIG~a~a~~la~~G~~V~~~~ 42 (277)
T 3tsc_A 7 GKLEGRVAFITGAAR--GQGRAHAVRMAAEGADIIAVD 42 (277)
T ss_dssp CTTTTCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEE
T ss_pred cccCCCEEEEECCcc--HHHHHHHHHHHHcCCEEEEEe
Confidence 358899999999765 499999999999999999874
No 324
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=56.23 E-value=13 Score=28.38 Aligned_cols=35 Identities=17% Similarity=0.393 Sum_probs=29.4
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
.+.|+++++.||.. .+.++..++.-+||+++.+.-
T Consensus 309 ~l~gkrv~i~~~~~---~~~~l~~~L~elG~~vv~v~~ 343 (458)
T 1mio_B 309 YLQGKKVALLGDPD---EIIALSKFIIELGAIPKYVVT 343 (458)
T ss_dssp HHTTCEEEEEECHH---HHHHHHHHHHTTTCEEEEEEE
T ss_pred HcCCCEEEEEcCch---HHHHHHHHHHHCCCEEEEEEe
Confidence 47899999999964 778999899999998887654
No 325
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=56.09 E-value=36 Score=21.53 Aligned_cols=31 Identities=19% Similarity=0.118 Sum_probs=26.0
Q ss_pred EEEEECCCCCchhHHHHHHHHhhCCCEEEEECCC
Q psy4411 42 TITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPP 75 (99)
Q Consensus 42 ~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~ 75 (99)
++++||-+. +.-+++..+++.|.+++++-+.
T Consensus 3 ~vvIIGgG~---~Gl~~A~~l~~~g~~v~lie~~ 33 (180)
T 2ywl_A 3 DVIVVGGGP---SGLSAALFLARAGLKVLVLDGG 33 (180)
T ss_dssp EEEEECCSH---HHHHHHHHHHHTTCCEEEEECS
T ss_pred eEEEECCCH---HHHHHHHHHHHCCCcEEEEeCC
Confidence 688999865 7788889999999999998753
No 326
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=56.05 E-value=27 Score=24.55 Aligned_cols=37 Identities=19% Similarity=0.188 Sum_probs=31.5
Q ss_pred cCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 36 GRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 36 g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
++++|+++.+.|-.. -+...++..++.-|.+|+++.-
T Consensus 24 ~~l~gk~~lVTGas~--GIG~aia~~la~~G~~V~~~~~ 60 (299)
T 3t7c_A 24 GKVEGKVAFITGAAR--GQGRSHAITLAREGADIIAIDV 60 (299)
T ss_dssp CTTTTCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccCCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEec
Confidence 458899999999865 4999999999999999988753
No 327
>3aek_A Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_A* 3aes_A* 3aer_A* 3aet_A 3aeu_A
Probab=55.96 E-value=12 Score=28.60 Aligned_cols=35 Identities=23% Similarity=0.286 Sum_probs=30.1
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHH-hhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLL-TLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~-~~~G~~v~~~~P 74 (99)
.+.|+++++.||.. .+.++..++ .-+||+++.++.
T Consensus 304 ~l~Gkrv~i~g~~~---~~~~l~~~L~~elG~~vv~~~~ 339 (437)
T 3aek_A 304 TLTGKSLFMFPDSQ---LEIPLARFLARECGMKTTEIAT 339 (437)
T ss_dssp HHTTCEEEECSSSS---CHHHHHHHHHHTTCCEEEEEEE
T ss_pred HhCCCEEEEEcCch---HHHHHHHHHHHHcCCEEEEEEe
Confidence 48899999999965 678999999 889999998864
No 328
>1vb3_A Threonine synthase; PLP-dependent enzyme, lyase; HET: KPA; 2.20A {Escherichia coli} SCOP: c.79.1.1
Probab=55.66 E-value=24 Score=26.78 Aligned_cols=43 Identities=19% Similarity=0.252 Sum_probs=33.2
Q ss_pred CchhHHHHH-HHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCeE
Q psy4411 51 NGRTVHSLA-RLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQQ 94 (99)
Q Consensus 51 n~rv~~Sl~-~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~ 94 (99)
.||...+++ ..++++|++++++.|++- .++.-..+.+..|..+
T Consensus 134 sGNtG~A~A~~~a~~~G~~~~I~~P~~~-~s~~k~~~m~~~GA~V 177 (428)
T 1vb3_A 134 SGDTGAAVAHAFYGLPNVKVVILYPRGK-ISPLQEKLFCTLGGNI 177 (428)
T ss_dssp SSSHHHHHHHHTTTCTTEEEEEEEETTC-SCHHHHHHHHSCCTTE
T ss_pred CchHHHHHHHHHhhhcCCeEEEEECCCC-CCHHHHHHHHhcCCeE
Confidence 345999999 599999999999999862 4555556677778876
No 329
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=55.62 E-value=16 Score=28.58 Aligned_cols=36 Identities=19% Similarity=0.254 Sum_probs=28.9
Q ss_pred cCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 36 GRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 36 g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
..+.|+++++.||.. .+.|++.++.-+||+++.+.-
T Consensus 356 ~~l~Gkrv~i~gd~~---~~~~la~~L~ElGm~vv~v~~ 391 (519)
T 1qgu_B 356 TWLHGKKFGLYGDPD---FVMGLTRFLLELGCEPTVILS 391 (519)
T ss_dssp HHHTTCEEEEESCHH---HHHHHHHHHHHTTCEEEEEEE
T ss_pred HHcCCCEEEEECCch---HHHHHHHHHHHCCCEEEEEEe
Confidence 348899999999843 678888888899998875543
No 330
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=55.56 E-value=8.4 Score=29.72 Aligned_cols=35 Identities=9% Similarity=0.008 Sum_probs=29.2
Q ss_pred cCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEEC
Q psy4411 36 GRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVS 73 (99)
Q Consensus 36 g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~ 73 (99)
..+.|+++++.||.. -+.+++..+.-+||+++.+.
T Consensus 309 ~~l~Gkrv~i~~~~~---~~~~l~~~L~elGm~vv~~~ 343 (458)
T 3pdi_B 309 FMLSSARTAIAADPD---LLLGFDALLRSMGAHTVAAV 343 (458)
T ss_dssp HHHTTCEEEEECCHH---HHHHHHHHHHTTTCEEEEEE
T ss_pred HhcCCCEEEEECCcH---HHHHHHHHHHHCCCEEEEEE
Confidence 348899999999964 66889899988999988765
No 331
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=55.43 E-value=35 Score=23.60 Aligned_cols=30 Identities=13% Similarity=0.047 Sum_probs=25.0
Q ss_pred EEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 42 TITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 42 ~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
+|+++|-++ +..+++..++..|.+|++..+
T Consensus 2 ~i~iiG~G~---mG~~~a~~l~~~g~~V~~~~~ 31 (296)
T 2gf2_A 2 PVGFIGLGN---MGNPMAKNLMKHGYPLIIYDV 31 (296)
T ss_dssp CEEEECCST---THHHHHHHHHHTTCCEEEECS
T ss_pred eEEEEeccH---HHHHHHHHHHHCCCEEEEEeC
Confidence 689999754 888999999999999887755
No 332
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=55.34 E-value=24 Score=25.46 Aligned_cols=35 Identities=9% Similarity=0.084 Sum_probs=29.4
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCC-EEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDV-KLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~-~v~~~~P 74 (99)
++++++++++|-+. ++++.+..+...|. +++++.-
T Consensus 119 ~~~~k~vlvlGaGG---aaraia~~L~~~G~~~v~v~nR 154 (282)
T 3fbt_A 119 EIKNNICVVLGSGG---AARAVLQYLKDNFAKDIYVVTR 154 (282)
T ss_dssp CCTTSEEEEECSST---THHHHHHHHHHTTCSEEEEEES
T ss_pred CccCCEEEEECCcH---HHHHHHHHHHHcCCCEEEEEeC
Confidence 58899999999864 89999999999997 7877653
No 333
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=55.17 E-value=30 Score=24.60 Aligned_cols=34 Identities=9% Similarity=-0.006 Sum_probs=28.2
Q ss_pred CCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 38 VNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 38 l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
.+-.+|+++|-++ +..+++..+++.|.+|++..+
T Consensus 19 ~~m~~I~iIG~G~---mG~~~A~~l~~~G~~V~~~dr 52 (310)
T 3doj_A 19 SHMMEVGFLGLGI---MGKAMSMNLLKNGFKVTVWNR 52 (310)
T ss_dssp CCSCEEEEECCSH---HHHHHHHHHHHTTCEEEEECS
T ss_pred ccCCEEEEECccH---HHHHHHHHHHHCCCeEEEEeC
Confidence 3447899999754 999999999999999887654
No 334
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=55.17 E-value=17 Score=25.48 Aligned_cols=31 Identities=13% Similarity=-0.056 Sum_probs=25.8
Q ss_pred cEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 41 LTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 41 ~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
.+|+++|-++ +..+++..+++.|.+|++..+
T Consensus 2 ~~I~iiG~G~---mG~~~a~~l~~~G~~V~~~dr 32 (287)
T 3pdu_A 2 TTYGFLGLGI---MGGPMAANLVRAGFDVTVWNR 32 (287)
T ss_dssp CCEEEECCST---THHHHHHHHHHHTCCEEEECS
T ss_pred CeEEEEccCH---HHHHHHHHHHHCCCeEEEEcC
Confidence 3799999754 899999999999999887754
No 335
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=55.07 E-value=14 Score=25.71 Aligned_cols=37 Identities=14% Similarity=0.116 Sum_probs=31.3
Q ss_pred cCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 36 GRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 36 g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
.+++|+++.+.|-.. -+.+.++..++.-|.+|+++.-
T Consensus 22 ~~l~gk~~lVTGas~--gIG~aia~~la~~G~~V~~~~r 58 (271)
T 4ibo_A 22 FDLGGRTALVTGSSR--GLGRAMAEGLAVAGARILINGT 58 (271)
T ss_dssp GCCTTCEEEETTCSS--HHHHHHHHHHHHTTCEEEECCS
T ss_pred cCCCCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeC
Confidence 468899999999755 4999999999999999988764
No 336
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=54.88 E-value=17 Score=24.87 Aligned_cols=36 Identities=8% Similarity=0.062 Sum_probs=30.8
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
+++|+++.+.|-..- +.+.++..++.-|.+|+++.-
T Consensus 9 ~l~~k~vlVTGas~g--IG~~ia~~l~~~G~~V~~~~r 44 (256)
T 3gaf_A 9 HLNDAVAIVTGAAAG--IGRAIAGTFAKAGASVVVTDL 44 (256)
T ss_dssp CCTTCEEEECSCSSH--HHHHHHHHHHHHTCEEEEEES
T ss_pred CCCCCEEEEECCCCH--HHHHHHHHHHHCCCEEEEEeC
Confidence 588999999997654 999999999999999988764
No 337
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=54.85 E-value=24 Score=25.36 Aligned_cols=36 Identities=19% Similarity=0.080 Sum_probs=31.1
Q ss_pred cCCCCcEEEEECCCCCchhHHHHHHHHhhCCC-EEEEECC
Q psy4411 36 GRVNGLTITMVGDLKNGRTVHSLARLLTLYDV-KLNYVSP 74 (99)
Q Consensus 36 g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~-~v~~~~P 74 (99)
..++++++.++|-+ .++++.+..++..|. +++++.-
T Consensus 123 ~~l~~k~vlVlGaG---G~g~aia~~L~~~G~~~v~i~~R 159 (283)
T 3jyo_A 123 PNAKLDSVVQVGAG---GVGNAVAYALVTHGVQKLQVADL 159 (283)
T ss_dssp TTCCCSEEEEECCS---HHHHHHHHHHHHTTCSEEEEECS
T ss_pred cCcCCCEEEEECCc---HHHHHHHHHHHHCCCCEEEEEEC
Confidence 47899999999975 499999999999998 7988865
No 338
>4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A
Probab=54.69 E-value=26 Score=27.53 Aligned_cols=36 Identities=25% Similarity=0.230 Sum_probs=26.3
Q ss_pred cCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCC
Q psy4411 36 GRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPP 75 (99)
Q Consensus 36 g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~ 75 (99)
-..+|.+|.|+||...|= ++..-...|-+-..+.||
T Consensus 291 lg~~g~~VLY~GDhi~~D----i~~~kk~~gWrT~~Ii~E 326 (470)
T 4g63_A 291 LGVGGDEILYIGDHIYGD----ILRLKKDCNWRTALVVEE 326 (470)
T ss_dssp TTCCGGGEEEEESCCCSC----HHHHHHSCCCEEEEECTT
T ss_pred hCCCCCeEEEECCchHHH----HHhhhhccCCeEEEEhHH
Confidence 346888999999976543 444445679888889995
No 339
>1p8a_A Protein tyrosine phosphatase; hydrolase; NMR {Tritrichomonas foetus} SCOP: c.44.1.1
Probab=54.58 E-value=35 Score=21.85 Aligned_cols=55 Identities=9% Similarity=0.099 Sum_probs=38.6
Q ss_pred cEEEEEC--CCCCchhHHHHHHHHhhCCCEEEEECCC----CCCCCHHHHHHHHhcCCeEE
Q psy4411 41 LTITMVG--DLKNGRTVHSLARLLTLYDVKLNYVSPP----NLGMPESIQEFVASKGKQQE 95 (99)
Q Consensus 41 ~~i~~vG--d~~n~rv~~Sl~~~~~~~G~~v~~~~P~----~~~~~~~~~~~a~~~g~~~~ 95 (99)
.+|.||. +.-.|+++-.++.-...-...+.-++-. |-.+++..++.+++.|++++
T Consensus 5 ~~VLFVC~gN~cRSpmAEal~~~~~~~~~~v~SAGt~~~~~g~~~~p~a~~~l~e~Gid~s 65 (146)
T 1p8a_A 5 KAVLFVCLGNICRSPACEGICRDMVGDKLIIDSAATSGFHVGQSPDTRSQKVCKSNGVDIS 65 (146)
T ss_dssp CCEEEESSSSCSSSTTHHHHHHHHHSSCSSCEEECSCTTSCSCSCTHHHHHHHHHHSCCCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHhcCCCEEEEeeecCCcccCCCCCHHHHHHHHHcCCChh
Confidence 5788885 5555677777777665534666676654 44588888888999988764
No 340
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=54.21 E-value=19 Score=24.73 Aligned_cols=32 Identities=9% Similarity=-0.022 Sum_probs=26.6
Q ss_pred CCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEE
Q psy4411 39 NGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYV 72 (99)
Q Consensus 39 ~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~ 72 (99)
+|+++.+.|-.. -+.+.++..++.-|.++++.
T Consensus 3 ~~k~vlVTGas~--gIG~aia~~l~~~G~~vv~~ 34 (258)
T 3oid_A 3 QNKCALVTGSSR--GVGKAAAIRLAENGYNIVIN 34 (258)
T ss_dssp CCCEEEESSCSS--HHHHHHHHHHHHTTCEEEEE
T ss_pred CCCEEEEecCCc--hHHHHHHHHHHHCCCEEEEE
Confidence 467888888755 49999999999999999886
No 341
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=54.14 E-value=36 Score=25.22 Aligned_cols=46 Identities=13% Similarity=0.077 Sum_probs=32.3
Q ss_pred CCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcC
Q psy4411 38 VNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKG 91 (99)
Q Consensus 38 l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g 91 (99)
.++.+|+++|-++ +..+++..+++.|.+|++..+ +++-.+.+.+.|
T Consensus 20 m~~mkIgiIGlG~---mG~~~A~~L~~~G~~V~v~dr-----~~~~~~~l~~~g 65 (358)
T 4e21_A 20 FQSMQIGMIGLGR---MGADMVRRLRKGGHECVVYDL-----NVNAVQALEREG 65 (358)
T ss_dssp --CCEEEEECCSH---HHHHHHHHHHHTTCEEEEECS-----CHHHHHHHHTTT
T ss_pred hcCCEEEEECchH---HHHHHHHHHHhCCCEEEEEeC-----CHHHHHHHHHCC
Confidence 4567999999643 999999999999999887654 344444444443
No 342
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=53.88 E-value=22 Score=25.20 Aligned_cols=28 Identities=7% Similarity=0.121 Sum_probs=23.3
Q ss_pred ECCCCCchhHHHHHHHHhhCCCEEEEEC
Q psy4411 46 VGDLKNGRTVHSLARLLTLYDVKLNYVS 73 (99)
Q Consensus 46 vGd~~n~rv~~Sl~~~~~~~G~~v~~~~ 73 (99)
++....|.+...++..+...|.+|++++
T Consensus 23 ItN~SSG~mG~aiA~~~~~~Ga~V~lv~ 50 (232)
T 2gk4_A 23 ITNHSTGHLGKIITETLLSAGYEVCLIT 50 (232)
T ss_dssp EEECCCCHHHHHHHHHHHHTTCEEEEEE
T ss_pred ccCCCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 3334467899999999999999999876
No 343
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=53.20 E-value=20 Score=25.25 Aligned_cols=31 Identities=10% Similarity=0.006 Sum_probs=27.0
Q ss_pred cEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 41 LTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 41 ~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
.||+++|-+. +..+++..++..|.+|++..+
T Consensus 5 ~kV~VIGaG~---mG~~iA~~la~~G~~V~l~d~ 35 (283)
T 4e12_A 5 TNVTVLGTGV---LGSQIAFQTAFHGFAVTAYDI 35 (283)
T ss_dssp CEEEEECCSH---HHHHHHHHHHHTTCEEEEECS
T ss_pred CEEEEECCCH---HHHHHHHHHHhCCCeEEEEeC
Confidence 5899999754 999999999999999988755
No 344
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=52.99 E-value=19 Score=30.20 Aligned_cols=54 Identities=13% Similarity=0.091 Sum_probs=40.2
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCeEE
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQQE 95 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~~ 95 (99)
...+++++++|.+. ++--++..++.+|.+++++..... +.+. .+.+++.|+++.
T Consensus 281 ~~~gk~vvViGgG~---~g~E~A~~L~~~G~~Vtvv~~~~~-~~~~-~~~l~~~GV~v~ 334 (965)
T 2gag_A 281 VRAGARIAVATTND---SAYELVRELAATGGVVAVIDARSS-ISAA-AAQAVADGVQVI 334 (965)
T ss_dssp EESCSSEEEEESST---THHHHHHHHGGGTCCSEEEESCSS-CCHH-HHHHHHTTCCEE
T ss_pred CCCCCeEEEEcCCH---HHHHHHHHHHHcCCcEEEEECCCc-cchh-HHHHHhCCeEEE
Confidence 35578999999865 778888888999998888876544 3344 677788887764
No 345
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=52.70 E-value=13 Score=26.35 Aligned_cols=36 Identities=14% Similarity=0.138 Sum_probs=29.3
Q ss_pred CCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCC
Q psy4411 38 VNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPN 76 (99)
Q Consensus 38 l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~ 76 (99)
+.+++|+++|.+. ++-.++..++.+|.+++++.+..
T Consensus 161 ~~~~~vvVvG~G~---~g~e~A~~l~~~g~~V~lv~~~~ 196 (360)
T 3ab1_A 161 FKGKRVVIVGGGD---SALDWTVGLIKNAASVTLVHRGH 196 (360)
T ss_dssp GTTCEEEEECSSH---HHHHHHHHTTTTSSEEEEECSSS
T ss_pred cCCCcEEEECCCH---HHHHHHHHHHhcCCEEEEEEcCC
Confidence 4578999999854 77778888888899999998854
No 346
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=52.63 E-value=40 Score=23.24 Aligned_cols=45 Identities=13% Similarity=0.100 Sum_probs=33.3
Q ss_pred cEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCe
Q psy4411 41 LTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQ 93 (99)
Q Consensus 41 ~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~ 93 (99)
.||+++|-++ +..+++..+++-|.+|++... +++..+.+++.|..
T Consensus 4 m~i~iiG~G~---~G~~~a~~l~~~g~~V~~~~r-----~~~~~~~~~~~g~~ 48 (316)
T 2ew2_A 4 MKIAIAGAGA---MGSRLGIMLHQGGNDVTLIDQ-----WPAHIEAIRKNGLI 48 (316)
T ss_dssp CEEEEECCSH---HHHHHHHHHHHTTCEEEEECS-----CHHHHHHHHHHCEE
T ss_pred CeEEEECcCH---HHHHHHHHHHhCCCcEEEEEC-----CHHHHHHHHhCCEE
Confidence 4899999743 999999999999999988754 34455555555543
No 347
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=52.48 E-value=21 Score=22.91 Aligned_cols=37 Identities=24% Similarity=0.215 Sum_probs=28.1
Q ss_pred CcEEEEECCCCC-chhHHHHHHHHhhCCCEEEEECCCC
Q psy4411 40 GLTITMVGDLKN-GRTVHSLARLLTLYDVKLNYVSPPN 76 (99)
Q Consensus 40 g~~i~~vGd~~n-~rv~~Sl~~~~~~~G~~v~~~~P~~ 76 (99)
-++|++||-..+ +++.+.++.-+...|.++..+.|+.
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~vnp~~ 50 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKV 50 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEECSSS
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCCCEEEEeCCcc
Confidence 578999997533 4577777777778888888888854
No 348
>1d1q_A Tyrosine phosphatase (E.C.3.1.3.48); beta-alpha-beta, hydrolase; HET: 4NP; 1.70A {Saccharomyces cerevisiae} SCOP: c.44.1.1 PDB: 1d2a_A* 1d1p_A*
Probab=52.36 E-value=38 Score=22.07 Aligned_cols=57 Identities=4% Similarity=0.033 Sum_probs=35.4
Q ss_pred CCcEEEEECCCC--CchhHHHHHHHHhh-CC-----CEEEEECCC----CCCCCHHHHHHHHhcCCeEE
Q psy4411 39 NGLTITMVGDLK--NGRTVHSLARLLTL-YD-----VKLNYVSPP----NLGMPESIQEFVASKGKQQE 95 (99)
Q Consensus 39 ~g~~i~~vGd~~--n~rv~~Sl~~~~~~-~G-----~~v~~~~P~----~~~~~~~~~~~a~~~g~~~~ 95 (99)
...+|.||.-+| .|+++-.++.-... .| ..+.-++-. |-.+++..++.+++.|++++
T Consensus 6 ~~~~VLFVCtgN~cRSpmAEal~~~~~~~~gl~~~~~~v~SAGt~~~~~g~~~~p~a~~~l~~~Gid~s 74 (161)
T 1d1q_A 6 PKISVAFIALGNFCRSPMAEAIFKHEVEKANLENRFNKIDSFGTSNYHVGESPDHRTVSICKQHGVKIN 74 (161)
T ss_dssp CCEEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEEESSCTTBTCCCCHHHHHHHHHTTCCCC
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHHHHHHcCCCCCeEEEEeccccCCcCCCCCCHHHHHHHHHcCcCCC
Confidence 346899997644 34444444444332 23 445555543 44688999999999998765
No 349
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=52.32 E-value=30 Score=24.25 Aligned_cols=35 Identities=17% Similarity=0.171 Sum_probs=30.6
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
++++++++++|-+ .+.++.+..++..|.+++++.-
T Consensus 116 ~l~~k~vlViGaG---g~g~a~a~~L~~~G~~V~v~~R 150 (271)
T 1nyt_A 116 IRPGLRILLIGAG---GASRGVLLPLLSLDCAVTITNR 150 (271)
T ss_dssp CCTTCEEEEECCS---HHHHHHHHHHHHTTCEEEEECS
T ss_pred CcCCCEEEEECCc---HHHHHHHHHHHHcCCEEEEEEC
Confidence 6889999999974 4999999999999999988864
No 350
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=52.23 E-value=34 Score=24.41 Aligned_cols=47 Identities=13% Similarity=0.130 Sum_probs=33.1
Q ss_pred CcEEEEECCCCCchhHHHHHHHHhhCCC-EEEEECCCCCCCCHHHHHHHHhcCC
Q psy4411 40 GLTITMVGDLKNGRTVHSLARLLTLYDV-KLNYVSPPNLGMPESIQEFVASKGK 92 (99)
Q Consensus 40 g~~i~~vGd~~n~rv~~Sl~~~~~~~G~-~v~~~~P~~~~~~~~~~~~a~~~g~ 92 (99)
..||+++|-++ +..+++..+++.|. +|++..+.. +++..+.+++.|.
T Consensus 24 ~~~I~iIG~G~---mG~~~A~~L~~~G~~~V~~~dr~~---~~~~~~~~~~~g~ 71 (312)
T 3qsg_A 24 AMKLGFIGFGE---AASAIASGLRQAGAIDMAAYDAAS---AESWRPRAEELGV 71 (312)
T ss_dssp -CEEEEECCSH---HHHHHHHHHHHHSCCEEEEECSSC---HHHHHHHHHHTTC
T ss_pred CCEEEEECccH---HHHHHHHHHHHCCCCeEEEEcCCC---CHHHHHHHHHCCC
Confidence 46899999754 99999999999998 888776521 2344455555554
No 351
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=52.13 E-value=33 Score=26.91 Aligned_cols=52 Identities=8% Similarity=0.040 Sum_probs=38.1
Q ss_pred cEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCC--CCHHHH----HHHHhcCCeEE
Q psy4411 41 LTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLG--MPESIQ----EFVASKGKQQE 95 (99)
Q Consensus 41 ~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~--~~~~~~----~~a~~~g~~~~ 95 (99)
.++++||-+. +.=-++.++++||.+|+++..+..- .++++. +.+++.|+.+.
T Consensus 224 ~~lvIIGgG~---IGlE~A~~~~~lG~~VTii~~~~~L~~~D~ei~~~l~~~l~~~gi~~~ 281 (542)
T 4b1b_A 224 GKTLVVGASY---VALECSGFLNSLGYDVTVAVRSIVLRGFDQQCAVKVKLYMEEQGVMFK 281 (542)
T ss_dssp CSEEEECCSH---HHHHHHHHHHHHTCCEEEEESSCSSTTSCHHHHHHHHHHHHHTTCEEE
T ss_pred ceEEEECCCH---HHHHHHHHHHhcCCeEEEecccccccccchhHHHHHHHHHHhhcceee
Confidence 5899999876 8999999999999999988653332 345543 34567777664
No 352
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=51.94 E-value=32 Score=23.33 Aligned_cols=36 Identities=14% Similarity=0.131 Sum_probs=30.2
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
.++|+++.+.|-.. .+.+.++..++.-|.+|+++.-
T Consensus 4 ~l~~k~~lVTGas~--gIG~aia~~l~~~G~~V~~~~r 39 (247)
T 2jah_A 4 ALQGKVALITGASS--GIGEATARALAAEGAAVAIAAR 39 (247)
T ss_dssp TTTTCEEEEESCSS--HHHHHHHHHHHHTTCEEEEEES
T ss_pred cCCCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEEC
Confidence 36788999999765 4999999999999999988753
No 353
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=51.91 E-value=19 Score=23.93 Aligned_cols=40 Identities=15% Similarity=0.047 Sum_probs=28.9
Q ss_pred HHhcCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 33 EEMGRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 33 e~~g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
.....++|++|.+.|-... +.+.++..+..-|.+|+++.-
T Consensus 14 ~~~~~l~~~~ilVtGatG~--iG~~l~~~L~~~G~~V~~~~R 53 (236)
T 3e8x_A 14 RENLYFQGMRVLVVGANGK--VARYLLSELKNKGHEPVAMVR 53 (236)
T ss_dssp -------CCEEEEETTTSH--HHHHHHHHHHHTTCEEEEEES
T ss_pred ccccCcCCCeEEEECCCCh--HHHHHHHHHHhCCCeEEEEEC
Confidence 3445689999999997554 999999999999999988864
No 354
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=51.78 E-value=17 Score=24.93 Aligned_cols=36 Identities=6% Similarity=0.063 Sum_probs=30.4
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
.++|+++.+.|-.. -+.+.++..++.-|.+|+++.-
T Consensus 3 ~l~~k~vlVTGas~--gIG~aia~~l~~~G~~V~~~~r 38 (257)
T 3imf_A 3 AMKEKVVIITGGSS--GMGKGMATRFAKEGARVVITGR 38 (257)
T ss_dssp TTTTCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEeC
Confidence 47888998889755 4999999999999999988764
No 355
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=51.73 E-value=23 Score=24.64 Aligned_cols=38 Identities=13% Similarity=0.025 Sum_probs=32.4
Q ss_pred hcCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 35 MGRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 35 ~g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
..+++|+++.+.|-.. -+...++..++.-|.+|++++-
T Consensus 11 ~~~l~gk~vlVTGas~--gIG~~~a~~L~~~G~~V~~~~r 48 (291)
T 3rd5_A 11 LPSFAQRTVVITGANS--GLGAVTARELARRGATVIMAVR 48 (291)
T ss_dssp CCCCTTCEEEEECCSS--HHHHHHHHHHHHTTCEEEEEES
T ss_pred ccCCCCCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEEC
Confidence 4568999999999765 4999999999999999998864
No 356
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=51.58 E-value=38 Score=25.35 Aligned_cols=43 Identities=14% Similarity=0.206 Sum_probs=35.0
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGM 79 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~ 79 (99)
.++|++++.+=.-+.-|+=-||-.++.++|.++....|....+
T Consensus 60 ~L~gk~la~lF~e~STRTR~SFE~A~~~LGg~~i~l~~~~ssl 102 (339)
T 4a8t_A 60 LLKNKSLGMIFQQSSTRTRVSFETAMEQLGGHGEYLAPGQIQL 102 (339)
T ss_dssp TTTTCEEEEEESSCCSHHHHHHHHHHHHTTCEEEEECCC-CCS
T ss_pred ccCCceEEEEecCCCchHHHHHHHHHHHcCCeEEEeCcccccC
Confidence 4899999888654444899999999999999999999976554
No 357
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=51.32 E-value=36 Score=23.43 Aligned_cols=37 Identities=16% Similarity=0.126 Sum_probs=31.6
Q ss_pred cCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 36 GRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 36 g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
.+++|+++.+.|-.. -+.+.++..++.-|.+|+++.-
T Consensus 6 ~~l~~k~~lVTGas~--gIG~a~a~~l~~~G~~V~~~~r 42 (281)
T 3s55_A 6 ADFEGKTALITGGAR--GMGRSHAVALAEAGADIAICDR 42 (281)
T ss_dssp CTTTTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccCCCEEEEeCCCc--hHHHHHHHHHHHCCCeEEEEeC
Confidence 458899999999765 4999999999999999988764
No 358
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=51.21 E-value=18 Score=25.05 Aligned_cols=39 Identities=18% Similarity=0.143 Sum_probs=31.9
Q ss_pred HhcCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 34 EMGRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 34 ~~g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
....++|+++.+.|-.. -+.+.++..++.-|.+|+++.-
T Consensus 8 ~~~~~~~k~vlVTGas~--GIG~aia~~l~~~G~~V~~~~r 46 (269)
T 3vtz_A 8 HMEEFTDKVAIVTGGSS--GIGLAVVDALVRYGAKVVSVSL 46 (269)
T ss_dssp --CTTTTCEEEESSTTS--HHHHHHHHHHHHTTCEEEEEES
T ss_pred cccCCCCCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeC
Confidence 34568999999999765 4999999999999999988763
No 359
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=51.13 E-value=17 Score=25.62 Aligned_cols=36 Identities=8% Similarity=0.053 Sum_probs=31.4
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
+|+|+++.+.|-.. -+.+..+..+++-|.+|.++.-
T Consensus 8 ~L~GK~alVTGas~--GIG~aia~~la~~Ga~V~~~~r 43 (261)
T 4h15_A 8 NLRGKRALITAGTK--GAGAATVSLFLELGAQVLTTAR 43 (261)
T ss_dssp CCTTCEEEESCCSS--HHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCEEEEeccCc--HHHHHHHHHHHHcCCEEEEEEC
Confidence 68999999999765 4999999999999999998863
No 360
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=50.70 E-value=33 Score=23.74 Aligned_cols=36 Identities=11% Similarity=0.042 Sum_probs=30.7
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
+++++++.+.|-.. .+.+.++..++.-|.+|+++.-
T Consensus 19 ~l~~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r 54 (277)
T 2rhc_B 19 TQDSEVALVTGATS--GIGLEIARRLGKEGLRVFVCAR 54 (277)
T ss_dssp CTTSCEEEEETCSS--HHHHHHHHHHHHTTCEEEEEES
T ss_pred cCCCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEeC
Confidence 58889999999765 4999999999999999988753
No 361
>3rh0_A Arsenate reductase; oxidoreductase; 1.72A {Corynebacterium glutamicum}
Probab=50.57 E-value=48 Score=21.57 Aligned_cols=52 Identities=15% Similarity=0.096 Sum_probs=33.1
Q ss_pred CcEEEEECCCCCchhHHHHH-----HHHhhCCCEEEEECC-CCCCCCHHHHHHHHhcCCeE
Q psy4411 40 GLTITMVGDLKNGRTVHSLA-----RLLTLYDVKLNYVSP-PNLGMPESIQEFVASKGKQQ 94 (99)
Q Consensus 40 g~~i~~vGd~~n~rv~~Sl~-----~~~~~~G~~v~~~~P-~~~~~~~~~~~~a~~~g~~~ 94 (99)
-++|.||.-+| ++||-+ .-...-+..+.-++- ++-.+++..++.+++.|+++
T Consensus 20 ~~~VLFVC~gN---~cRSpmAEal~~~~~~~~~~v~SAGt~~g~~~dp~a~~vl~e~Gidi 77 (148)
T 3rh0_A 20 MKSVLFVCVGN---GGKSQMAAALAQKYASDSVEIHSAGTKPAQGLNQLSVESIAEVGADM 77 (148)
T ss_dssp CCEEEEEESSS---SSHHHHHHHHHHHHCCTTSEEEEEESSCCSSCCHHHHHHHHHTTCCC
T ss_pred CCEEEEECCCc---hhHHHHHHHHHHHhcCCCEEEEecccCCCCCCCHHHHHHHHHcCCCc
Confidence 36799997654 555533 332222356665553 25568888889999998765
No 362
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=50.56 E-value=39 Score=25.10 Aligned_cols=43 Identities=19% Similarity=0.333 Sum_probs=35.9
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGM 79 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~ 79 (99)
.++|++++.+=.-+.-|+=-||-.++.++|.++....|..-++
T Consensus 55 ~L~gk~la~lF~epSTRTR~SFE~A~~~LGg~~i~l~~~~ss~ 97 (325)
T 1vlv_A 55 RFKGMTLAMIFEKRSTRTRLAFETAFAEEGGHPIFLSPNDIHL 97 (325)
T ss_dssp TTTTCEEEEEESSCCHHHHHHHHHHHHHTTCEEEEECTTTCCT
T ss_pred cCCCCEEEEEeccCCcchHHHHHHHHHHcCCeEEEECCccccC
Confidence 3899999877654555898999999999999999999976554
No 363
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=50.53 E-value=36 Score=25.45 Aligned_cols=42 Identities=12% Similarity=0.180 Sum_probs=35.5
Q ss_pred CCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCC
Q psy4411 38 VNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGM 79 (99)
Q Consensus 38 l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~ 79 (99)
|+|++++.+=.-+.-|+=-||-.++.++|.++....|..-++
T Consensus 43 L~gk~la~lF~e~STRTR~SFE~A~~~LGg~~i~l~~~~ss~ 84 (335)
T 1dxh_A 43 LKRKNIALIFEKTSTRTRCAFEVAAYDQGANVTYIDPNSSQI 84 (335)
T ss_dssp CTTCEEEEEESSCCHHHHHHHHHHHHHTTCEEEEECTTTCCB
T ss_pred CCCCEEEEEecCCCcchHHHHHHHHHHcCCeEEEECCccccC
Confidence 899999888654555888999999999999999999976554
No 364
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=50.24 E-value=43 Score=23.87 Aligned_cols=47 Identities=9% Similarity=0.159 Sum_probs=34.1
Q ss_pred CCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCe
Q psy4411 38 VNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQ 93 (99)
Q Consensus 38 l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~ 93 (99)
+...||+++|-+. +...++..+++-|.+|++. . .++..+.+++.|..
T Consensus 17 ~~~~kI~IiGaGa---~G~~~a~~L~~~G~~V~l~-~-----~~~~~~~i~~~g~~ 63 (318)
T 3hwr_A 17 FQGMKVAIMGAGA---VGCYYGGMLARAGHEVILI-A-----RPQHVQAIEATGLR 63 (318)
T ss_dssp ---CEEEEESCSH---HHHHHHHHHHHTTCEEEEE-C-----CHHHHHHHHHHCEE
T ss_pred ccCCcEEEECcCH---HHHHHHHHHHHCCCeEEEE-E-----cHhHHHHHHhCCeE
Confidence 4568999999865 8899999999999999887 4 34555666665543
No 365
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=50.06 E-value=23 Score=24.78 Aligned_cols=36 Identities=17% Similarity=-0.018 Sum_probs=28.7
Q ss_pred cCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEEC
Q psy4411 36 GRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVS 73 (99)
Q Consensus 36 g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~ 73 (99)
.+++++++.+.|-.. .+.+.++..++.-|.+|++++
T Consensus 5 ~~l~~k~~lVTGas~--GIG~aia~~la~~G~~V~~~~ 40 (291)
T 1e7w_A 5 TAPTVPVALVTGAAK--RLGRSIAEGLHAEGYAVCLHY 40 (291)
T ss_dssp ---CCCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEE
T ss_pred cCCCCCEEEEECCCc--hHHHHHHHHHHHCCCeEEEEc
Confidence 357888888888755 499999999999999999886
No 366
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=49.98 E-value=38 Score=23.91 Aligned_cols=37 Identities=8% Similarity=0.121 Sum_probs=31.7
Q ss_pred cCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 36 GRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 36 g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
.+++|+++.+.|-..- +...++..++.-|.+|+++.-
T Consensus 37 ~~l~~k~vlVTGas~G--IG~aia~~la~~G~~V~~~~r 73 (293)
T 3rih_A 37 FDLSARSVLVTGGTKG--IGRGIATVFARAGANVAVAAR 73 (293)
T ss_dssp TCCTTCEEEETTTTSH--HHHHHHHHHHHTTCEEEEEES
T ss_pred cCCCCCEEEEeCCCcH--HHHHHHHHHHHCCCEEEEEEC
Confidence 4688999999997654 999999999999999998874
No 367
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=49.94 E-value=32 Score=23.45 Aligned_cols=36 Identities=17% Similarity=0.077 Sum_probs=30.4
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
+++++++.+.|-... +.+.++..++..|.+|+++.-
T Consensus 4 ~l~~k~vlVTGas~g--IG~~ia~~l~~~G~~V~~~~r 39 (262)
T 1zem_A 4 KFNGKVCLVTGAGGN--IGLATALRLAEEGTAIALLDM 39 (262)
T ss_dssp TTTTCEEEEETTTSH--HHHHHHHHHHHTTCEEEEEES
T ss_pred ccCCCEEEEeCCCcH--HHHHHHHHHHHCCCEEEEEeC
Confidence 477889999998654 999999999999999888753
No 368
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=49.92 E-value=35 Score=23.50 Aligned_cols=36 Identities=17% Similarity=0.140 Sum_probs=30.5
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
+++|+++.+.|-.. .+.+.++..++..|.+|+++.-
T Consensus 18 ~l~~k~vlVTGas~--gIG~aia~~l~~~G~~V~~~~r 53 (273)
T 1ae1_A 18 SLKGTTALVTGGSK--GIGYAIVEELAGLGARVYTCSR 53 (273)
T ss_dssp CCTTCEEEEESCSS--HHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCEEEEECCcc--hHHHHHHHHHHHCCCEEEEEeC
Confidence 47889999999755 4999999999999999988754
No 369
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=49.87 E-value=13 Score=26.74 Aligned_cols=36 Identities=14% Similarity=0.080 Sum_probs=31.1
Q ss_pred cCCCCcEEEEECCCCCchhHHHHHHHHhhCCC-EEEEECC
Q psy4411 36 GRVNGLTITMVGDLKNGRTVHSLARLLTLYDV-KLNYVSP 74 (99)
Q Consensus 36 g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~-~v~~~~P 74 (99)
.+++|++++++|-+ .++++.+..+...|. +++++..
T Consensus 113 ~~l~~k~vlvlGaG---g~g~aia~~L~~~G~~~v~v~~R 149 (277)
T 3don_A 113 EGIEDAYILILGAG---GASKGIANELYKIVRPTLTVANR 149 (277)
T ss_dssp TTGGGCCEEEECCS---HHHHHHHHHHHTTCCSCCEEECS
T ss_pred CCcCCCEEEEECCc---HHHHHHHHHHHHCCCCEEEEEeC
Confidence 36899999999975 499999999999998 8888875
No 370
>3n8i_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, hydrolase, protein-ligand complex; HET: NLA; 1.50A {Homo sapiens} SCOP: c.44.1.1 PDB: 5pnt_A* 1xww_A 1bvh_A 1dg9_A* 1phr_A 1pnt_A 1z12_A 1z13_A 1c0e_A 2p4u_A
Probab=49.83 E-value=41 Score=22.01 Aligned_cols=55 Identities=9% Similarity=-0.027 Sum_probs=32.8
Q ss_pred CcEEEEECCCC--CchhHHHHHHHHh-hCC----CEEEEECCCC----CCCCHHHHHHHHhcCCeE
Q psy4411 40 GLTITMVGDLK--NGRTVHSLARLLT-LYD----VKLNYVSPPN----LGMPESIQEFVASKGKQQ 94 (99)
Q Consensus 40 g~~i~~vGd~~--n~rv~~Sl~~~~~-~~G----~~v~~~~P~~----~~~~~~~~~~a~~~g~~~ 94 (99)
..+|.||.-+| .|+++-.++.-.. ..| ..+.-++-.. -.+++..++.+++.|+++
T Consensus 5 ~~~vLFVC~gN~cRSpmAE~~~~~~~~~~gl~~~~~v~SAGt~~~~~G~~~~~~a~~~l~~~Gid~ 70 (157)
T 3n8i_A 5 TKSVLFVCLGNICRSPIAEAVFRKLVTDQNISENWRVDSAATSGYEIGNPPDYRGQSCMKRHGIPM 70 (157)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEESSSTTTTCCCCHHHHHHHHHTTCCC
T ss_pred CCEEEEECCCchhHHHHHHHHHHHHHHHcCCCCcEEEEeeecCccccCCCCCHHHHHHHHHcCcCC
Confidence 46899987644 2334444443332 223 3455555433 357888888899999775
No 371
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=49.74 E-value=38 Score=25.25 Aligned_cols=43 Identities=16% Similarity=0.275 Sum_probs=35.4
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGM 79 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~ 79 (99)
.|+|++++.+=.-+.-|+=-||-.++.++|.++....|..-++
T Consensus 41 ~L~gk~la~lF~e~STRTR~SFE~A~~~LGg~~i~l~~~~ss~ 83 (333)
T 1duv_G 41 KLTGKNIALIFEKDSTRTRCSFEVAAYDQGARVTYLGPSGSQI 83 (333)
T ss_dssp SCTTCEEEEEESSCCSHHHHHHHHHHHHTTCEEEEECSSSSCB
T ss_pred ccCCCEEEEEecCCCccHHHHHHHHHHHcCCeEEEECCccccC
Confidence 3899999877644444899999999999999999999976544
No 372
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2
Probab=49.47 E-value=20 Score=25.35 Aligned_cols=39 Identities=13% Similarity=0.218 Sum_probs=29.2
Q ss_pred hHHHHHHHHhhCCCEEEEEC-------CCCCCCCHHHHHHHHhcCCeEE
Q psy4411 54 TVHSLARLLTLYDVKLNYVS-------PPNLGMPESIQEFVASKGKQQE 95 (99)
Q Consensus 54 v~~Sl~~~~~~~G~~v~~~~-------P~~~~~~~~~~~~a~~~g~~~~ 95 (99)
++.-++..+ -| ++++++ |..++++++..+++++.|+++-
T Consensus 64 TA~k~~e~~--~~-~lVvVTh~~GF~~pg~~e~~~e~~~~L~~~G~~V~ 109 (206)
T 1t57_A 64 TALRLSEMV--EG-NIVSVTHHAGFREKGQLELEDEARDALLERGVNVY 109 (206)
T ss_dssp HHHHHHTTC--CS-EEEEECCCTTSSSTTCCSSCHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHc--cC-CEEEEeCcCCCCCCCCCcCCHHHHHHHHhCCCEEE
Confidence 554444432 24 888888 7788899999999999998873
No 373
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=49.44 E-value=27 Score=24.90 Aligned_cols=35 Identities=9% Similarity=0.023 Sum_probs=30.3
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCC-EEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDV-KLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~-~v~~~~P 74 (99)
++++++++++|-+ .++++.+..+...|. +++++.-
T Consensus 117 ~l~~k~~lvlGaG---g~~~aia~~L~~~G~~~v~i~~R 152 (272)
T 3pwz_A 117 PLRNRRVLLLGAG---GAVRGALLPFLQAGPSELVIANR 152 (272)
T ss_dssp CCTTSEEEEECCS---HHHHHHHHHHHHTCCSEEEEECS
T ss_pred CccCCEEEEECcc---HHHHHHHHHHHHcCCCEEEEEeC
Confidence 5889999999975 499999999999996 8988865
No 374
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=49.33 E-value=26 Score=24.16 Aligned_cols=40 Identities=15% Similarity=0.093 Sum_probs=32.0
Q ss_pred HHhcCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 33 EEMGRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 33 e~~g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
+....++++++.+.|-.. .+.+.++..++.-|.+|++++-
T Consensus 14 ~~~~~l~~k~~lVTGas~--gIG~~ia~~l~~~G~~V~~~~r 53 (267)
T 1vl8_A 14 KEVFDLRGRVALVTGGSR--GLGFGIAQGLAEAGCSVVVASR 53 (267)
T ss_dssp ---CCCTTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCcCCCCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEeC
Confidence 334568999999999765 4999999999999999988764
No 375
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=49.32 E-value=23 Score=25.60 Aligned_cols=36 Identities=19% Similarity=0.376 Sum_probs=25.0
Q ss_pred CCcEEEEECCCCCchhHHHHHHHHhhCC--CEEEEECCCCC
Q psy4411 39 NGLTITMVGDLKNGRTVHSLARLLTLYD--VKLNYVSPPNL 77 (99)
Q Consensus 39 ~g~~i~~vGd~~n~rv~~Sl~~~~~~~G--~~v~~~~P~~~ 77 (99)
.|+||++||-+. -.-|.+.-+.+.+ .+|+++-|..+
T Consensus 1 aGKkVvIIG~G~---AG~~aA~~L~~~~~~~~Vtlie~~~~ 38 (401)
T 3vrd_B 1 AGRKVVVVGGGT---GGATAAKYIKLADPSIEVTLIEPNET 38 (401)
T ss_dssp -CCEEEEECCSH---HHHHHHHHHHHHCTTSEEEEECSCSS
T ss_pred CcCEEEEECCcH---HHHHHHHHHHhcCcCCeEEEEeCCCC
Confidence 389999999865 4445555555544 79999998643
No 376
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=49.21 E-value=52 Score=25.44 Aligned_cols=54 Identities=9% Similarity=0.088 Sum_probs=38.5
Q ss_pred CCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCC--CCHHHH----HHHHhcCCeEE
Q psy4411 39 NGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLG--MPESIQ----EFVASKGKQQE 95 (99)
Q Consensus 39 ~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~--~~~~~~----~~a~~~g~~~~ 95 (99)
.+.++++||-+. ++--++..++++|.+|+++.+..+. +++++. +.+++.|+++.
T Consensus 285 ~~~~vvViGgG~---~g~E~A~~l~~~g~~Vtlv~~~~~l~~~d~~~~~~~~~~l~~~gv~i~ 344 (598)
T 2x8g_A 285 FPGKTLVIGASY---VALECAGFLASLGGDVTVMVRSILLRGFDQQMAEKVGDYMENHGVKFA 344 (598)
T ss_dssp CCCSEEEECCSH---HHHHHHHHHHHTTCCEEEEESSCSSTTSCHHHHHHHHHHHHHTTCEEE
T ss_pred CCCEEEEECCCH---HHHHHHHHHHHcCCEEEEEECCcCcCcCCHHHHHHHHHHHHhCCCEEE
Confidence 356899999764 8888899999999999999875221 244443 34556787764
No 377
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=49.20 E-value=26 Score=23.40 Aligned_cols=36 Identities=11% Similarity=0.072 Sum_probs=30.1
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
+++++++.+.|-.. .+.+.++..++.-|.+|+++.-
T Consensus 8 ~~~~~~vlVtGasg--giG~~la~~l~~~G~~V~~~~r 43 (255)
T 1fmc_A 8 RLDGKCAIITGAGA--GIGKEIAITFATAGASVVVSDI 43 (255)
T ss_dssp CCTTCEEEETTTTS--HHHHHHHHHHHTTTCEEEEEES
T ss_pred CCCCCEEEEECCcc--HHHHHHHHHHHHCCCEEEEEcC
Confidence 47888999999755 4999999999999999888754
No 378
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=48.86 E-value=32 Score=23.33 Aligned_cols=36 Identities=17% Similarity=0.147 Sum_probs=31.0
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
+++|+++.+.|-..- +.+.++..++.-|.+|.++.-
T Consensus 3 ~l~gk~vlVTGas~g--IG~a~a~~l~~~G~~V~~~~r 38 (247)
T 3rwb_A 3 RLAGKTALVTGAAQG--IGKAIAARLAADGATVIVSDI 38 (247)
T ss_dssp TTTTCEEEEETTTSH--HHHHHHHHHHHTTCEEEEECS
T ss_pred CcCCCEEEEECCCCH--HHHHHHHHHHHCCCEEEEEeC
Confidence 578999999997654 999999999999999988764
No 379
>2g0t_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.67A {Thermotoga maritima} SCOP: c.37.1.10
Probab=48.84 E-value=50 Score=24.75 Aligned_cols=56 Identities=9% Similarity=0.136 Sum_probs=39.4
Q ss_pred CcEEEEECCCCCc----hhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCeEE
Q psy4411 40 GLTITMVGDLKNG----RTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQQE 95 (99)
Q Consensus 40 g~~i~~vGd~~n~----rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~~ 95 (99)
+-.++++|-.+.| ...+..+.-+...|++|+--...-+.-+|++.+.|+++|.++-
T Consensus 89 ~~d~lvig~a~~gg~l~~~~~~~I~~Al~~G~nVvsglh~~l~~~pel~~~A~~~Gv~i~ 148 (350)
T 2g0t_A 89 GAEVLIIGVSNPGGYLEEQIATLVKKALSLGMDVISGLHFKISQQTEFLKIAHENGTRII 148 (350)
T ss_dssp TCCEEEECCCSCCHHHHHHHHHHHHHHHHTTCEEEECCCC--CCHHHHHHHHHHHTCCEE
T ss_pred CCCEEEEEecCCCCCCCHHHHHHHHHHHHcCCcEEeCChhhhhCCHHHHHHHHHCCCEEE
Confidence 3567888865544 2445777778888999887777655556778788889898774
No 380
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=48.73 E-value=41 Score=23.12 Aligned_cols=36 Identities=14% Similarity=0.026 Sum_probs=28.0
Q ss_pred cEEEEECCCCCc-h-----hHHHHHHHHhhCCCEEEEECCCC
Q psy4411 41 LTITMVGDLKNG-R-----TVHSLARLLTLYDVKLNYVSPPN 76 (99)
Q Consensus 41 ~~i~~vGd~~n~-r-----v~~Sl~~~~~~~G~~v~~~~P~~ 76 (99)
++|+++|++... + .++.++..+.++|.++..+.+..
T Consensus 3 ~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~~v~~~~~~~ 44 (306)
T 1iow_A 3 DKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPKE 44 (306)
T ss_dssp CEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTTT
T ss_pred cEEEEEeCCCCccceEcHHhHHHHHHHHHHCCCeEEEEecCc
Confidence 689999986531 0 45788899999999999998864
No 381
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=48.73 E-value=43 Score=25.35 Aligned_cols=42 Identities=12% Similarity=0.223 Sum_probs=35.4
Q ss_pred CCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCC
Q psy4411 38 VNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGM 79 (99)
Q Consensus 38 l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~ 79 (99)
|+|++++.+=.-+.-|+=-||-.++.++|.++....|..-++
T Consensus 65 L~Gk~la~lF~e~STRTR~SFE~A~~~LGg~vi~l~~~~ss~ 106 (359)
T 2w37_A 65 LEGKNIALLFEKSSTRTRSAFTTASIDLGAHPEYLGQNDIQL 106 (359)
T ss_dssp TTTCEEEEEESSCCHHHHHHHHHHHHHTTCEEEEECTTTCCT
T ss_pred cCCCEEEEEecCCCccHHHHHHHHHHHcCCeEEEeCCccccC
Confidence 899999877654555888999999999999999999976554
No 382
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=48.65 E-value=57 Score=24.54 Aligned_cols=44 Identities=14% Similarity=0.153 Sum_probs=34.9
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMP 80 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~ 80 (99)
.++|++++.+=.-+.-|+=-||-.++.++|.++...+|...++.
T Consensus 63 ~L~gk~va~lF~e~STRTR~SFE~A~~~LGg~~i~l~~~~s~l~ 106 (353)
T 3sds_A 63 ALSGKTVAMMFSKRSTRTRVSTEGAVVKMGGHPMFLGKDDIQLG 106 (353)
T ss_dssp TTTTCEEEEEESSCCHHHHHHHHHHHHHTTCEEEEECTTTC--C
T ss_pred ccCCCEEEEEecCCchhHHHHHHHHHHHcCCeEEecCCcccccc
Confidence 48999998875544557888999999999999999998766544
No 383
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=48.58 E-value=59 Score=21.89 Aligned_cols=92 Identities=13% Similarity=0.109 Sum_probs=58.8
Q ss_pred CCCHHHHHHHHhhc-cCEEEEccCC------chhH---HHHhcCCCCcEEEEECCC--CCchhHHHHHHHHhhCCCEEEE
Q psy4411 4 YSNLIDTVAVLSGY-ADVIVLRHPE------PGAV---KEEMGRVNGLTITMVGDL--KNGRTVHSLARLLTLYDVKLNY 71 (99)
Q Consensus 4 ~Es~~Dta~vls~y-~D~iv~R~~~------~~~~---~e~~g~l~g~~i~~vGd~--~n~rv~~Sl~~~~~~~G~~v~~ 71 (99)
+.++.++.+.+..+ +|.|-++... ...+ ++.+. -.|+++.-++-. ..-......+..++.+|.+.+.
T Consensus 29 ~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~-~~gl~i~~~~~~~~~~~~~~~~~i~~A~~lGa~~v~ 107 (257)
T 3lmz_A 29 NFDLDTTLKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCA-AHKVTGYAVGPIYMKSEEEIDRAFDYAKRVGVKLIV 107 (257)
T ss_dssp TSCHHHHHHHHHHTTCCEEEECTTTSCTTCCHHHHHHHHHHHH-HTTCEEEEEEEEEECSHHHHHHHHHHHHHHTCSEEE
T ss_pred CCCHHHHHHHHHHhCCCEEEEecccCCCCCCHHHHHHHHHHHH-HcCCeEEEEeccccCCHHHHHHHHHHHHHhCCCEEE
Confidence 45889999999998 7999998641 1111 22222 235666544321 2223567889999999998888
Q ss_pred ECCCCCCCCHHHHHHHHhcCCeEEEE
Q psy4411 72 VSPPNLGMPESIQEFVASKGKQQEVY 97 (99)
Q Consensus 72 ~~P~~~~~~~~~~~~a~~~g~~~~~~ 97 (99)
+.|. .+.-..+.+.|++.|+++-+.
T Consensus 108 ~~p~-~~~l~~l~~~a~~~gv~l~lE 132 (257)
T 3lmz_A 108 GVPN-YELLPYVDKKVKEYDFHYAIH 132 (257)
T ss_dssp EEEC-GGGHHHHHHHHHHHTCEEEEE
T ss_pred ecCC-HHHHHHHHHHHHHcCCEEEEe
Confidence 7763 222345566778889887654
No 384
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=48.50 E-value=27 Score=23.87 Aligned_cols=37 Identities=14% Similarity=0.118 Sum_probs=31.6
Q ss_pred cCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 36 GRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 36 g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
.+++|+++.+.|-.. -+.+.++..++.-|.+|+++.-
T Consensus 4 ~~l~gk~~lVTGas~--gIG~a~a~~l~~~G~~V~~~~r 40 (255)
T 4eso_A 4 GNYQGKKAIVIGGTH--GMGLATVRRLVEGGAEVLLTGR 40 (255)
T ss_dssp CTTTTCEEEEETCSS--HHHHHHHHHHHHTTCEEEEEES
T ss_pred cCCCCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEeC
Confidence 358899999999765 4999999999999999988864
No 385
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=48.40 E-value=28 Score=23.66 Aligned_cols=37 Identities=14% Similarity=0.099 Sum_probs=31.4
Q ss_pred cCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 36 GRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 36 g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
..++|+++.+.|-.. -+.+.++..++..|.+|+++.-
T Consensus 8 ~~l~~k~vlVTGas~--gIG~aia~~l~~~G~~V~~~~r 44 (252)
T 3f1l_A 8 DLLNDRIILVTGASD--GIGREAAMTYARYGATVILLGR 44 (252)
T ss_dssp TTTTTCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEES
T ss_pred cccCCCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeC
Confidence 358899999999765 4999999999999999988764
No 386
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=48.39 E-value=54 Score=24.63 Aligned_cols=53 Identities=17% Similarity=0.060 Sum_probs=38.1
Q ss_pred CcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCC--CCHHHH----HHHHhcCCeEE
Q psy4411 40 GLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLG--MPESIQ----EFVASKGKQQE 95 (99)
Q Consensus 40 g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~--~~~~~~----~~a~~~g~~~~ 95 (99)
..+++++|-+. +.--++..++.+|.+|+++.+.... +++++. +.+++.|+++.
T Consensus 185 ~~~vvViGgG~---ig~E~A~~l~~~g~~Vtlv~~~~~l~~~d~~~~~~l~~~l~~~gv~~~ 243 (488)
T 3dgz_A 185 PGKTLVVGASY---VALECAGFLTGIGLDTTVMMRSIPLRGFDQQMSSLVTEHMESHGTQFL 243 (488)
T ss_dssp CCSEEEECCSH---HHHHHHHHHHHTTCCEEEEESSCSSTTSCHHHHHHHHHHHHHTTCEEE
T ss_pred CCeEEEECCCH---HHHHHHHHHHHcCCceEEEEcCcccccCCHHHHHHHHHHHHHCCCEEE
Confidence 45799999854 7888899999999999998765432 345543 34567787763
No 387
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=48.22 E-value=33 Score=25.82 Aligned_cols=35 Identities=14% Similarity=0.110 Sum_probs=29.8
Q ss_pred CCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCC
Q psy4411 38 VNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPP 75 (99)
Q Consensus 38 l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~ 75 (99)
+.+++|++||.+. ++-.++..++++|.+++++...
T Consensus 195 ~~~k~VvVVG~G~---sg~eiA~~l~~~g~~V~li~~~ 229 (464)
T 2xve_A 195 FKDKTVLLVGSSY---SAEDIGSQCYKYGAKKLISCYR 229 (464)
T ss_dssp GTTSEEEEECCST---THHHHHHHHHHTTCSEEEEECS
T ss_pred cCCCEEEEEcCCC---CHHHHHHHHHHhCCeEEEEEEC
Confidence 5789999999865 7888889999999999988753
No 388
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=48.09 E-value=31 Score=25.29 Aligned_cols=37 Identities=14% Similarity=0.184 Sum_probs=31.6
Q ss_pred cCCCCcEEEEECCCCCchhHHHHHHHHhhCCC-EEEEECCC
Q psy4411 36 GRVNGLTITMVGDLKNGRTVHSLARLLTLYDV-KLNYVSPP 75 (99)
Q Consensus 36 g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~-~v~~~~P~ 75 (99)
.+++|+++.++|-+ .++++.+..++..|. +++++.-.
T Consensus 150 ~~l~gk~~lVlGaG---G~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 150 HDIIGKKMTICGAG---GAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp CCCTTSEEEEECCS---HHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CCccCCEEEEECCC---hHHHHHHHHHHHCCCCEEEEEECC
Confidence 36899999999974 499999999999998 89888653
No 389
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=48.03 E-value=54 Score=25.04 Aligned_cols=53 Identities=11% Similarity=0.058 Sum_probs=38.0
Q ss_pred CcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCC--CCHHHHH----HHHhcCCeEE
Q psy4411 40 GLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLG--MPESIQE----FVASKGKQQE 95 (99)
Q Consensus 40 g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~--~~~~~~~----~a~~~g~~~~ 95 (99)
..+++++|.+. +.-.++..++.+|.+|+++.+.... +++++.+ .+++.|+++.
T Consensus 210 ~~~vvVIGgG~---ig~E~A~~l~~~G~~Vtlv~~~~~l~~~d~~~~~~~~~~l~~~GV~v~ 268 (519)
T 3qfa_A 210 PGKTLVVGASY---VALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGIKFI 268 (519)
T ss_dssp CCSEEEECCSH---HHHHHHHHHHHTTCCEEEEESSCSSTTSCHHHHHHHHHHHHHTTCEEE
T ss_pred CCeEEEECCcH---HHHHHHHHHHHcCCeEEEEecccccccCCHHHHHHHHHHHHHCCCEEE
Confidence 35699999854 8888999999999999999764322 3455543 3567787764
No 390
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=47.96 E-value=63 Score=22.00 Aligned_cols=41 Identities=15% Similarity=0.165 Sum_probs=30.7
Q ss_pred HHh-cCCCCcEEEEECCCC----CchhHHHHHHHHhhCCCEEEEEC
Q psy4411 33 EEM-GRVNGLTITMVGDLK----NGRTVHSLARLLTLYDVKLNYVS 73 (99)
Q Consensus 33 e~~-g~l~g~~i~~vGd~~----n~rv~~Sl~~~~~~~G~~v~~~~ 73 (99)
++| .+++|.+|+||.-.. .-...+|...++.++|.++....
T Consensus 19 ~~f~~~~~~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~~~ 64 (206)
T 3l4e_A 19 TEFESNLQGKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEELD 64 (206)
T ss_dssp HHHSCCCTTCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEECC
T ss_pred HHHHHHcCCCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEEEE
Confidence 344 678899999996321 11367899999999999988774
No 391
>2ayx_A Sensor kinase protein RCSC; two independent structural domains, transferase; NMR {Escherichia coli} SCOP: c.23.1.1 c.23.1.6 PDB: 2ayz_A 2ayy_A
Probab=47.87 E-value=15 Score=25.19 Aligned_cols=35 Identities=9% Similarity=-0.017 Sum_probs=29.8
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEEC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVS 73 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~ 73 (99)
.++|++|.++.|... ....+...+..+|+++..+.
T Consensus 8 ~l~~~~vlvv~d~~~--~~~~l~~~L~~~g~~v~~~~ 42 (254)
T 2ayx_A 8 GLSGKRCWLAVRNAS--LCQFLETSLQRSGIVVTTYE 42 (254)
T ss_dssp TTTTEEEEEECCCHH--HHHHHHHHHTTTTEEEEECS
T ss_pred ccCCCEEEEEcCCHH--HHHHHHHHHHHCCCEEEEec
Confidence 589999999999654 77888899999999987765
No 392
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=47.80 E-value=32 Score=23.56 Aligned_cols=36 Identities=19% Similarity=0.203 Sum_probs=31.1
Q ss_pred cCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEEC
Q psy4411 36 GRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVS 73 (99)
Q Consensus 36 g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~ 73 (99)
..++|+++.+.|-..- +.+.++..++..|.+|+++.
T Consensus 6 ~~l~gk~vlVTGas~g--IG~~ia~~l~~~G~~V~~~~ 41 (287)
T 3pxx_A 6 GRVQDKVVLVTGGARG--QGRSHAVKLAEEGADIILFD 41 (287)
T ss_dssp CTTTTCEEEEETTTSH--HHHHHHHHHHHTTCEEEEEE
T ss_pred cccCCCEEEEeCCCCh--HHHHHHHHHHHCCCeEEEEc
Confidence 4588999999998654 99999999999999998875
No 393
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=47.79 E-value=28 Score=23.67 Aligned_cols=38 Identities=5% Similarity=0.066 Sum_probs=31.1
Q ss_pred hcCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 35 MGRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 35 ~g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
...++|+++.+.|-... +.+.++..++.-|.+|+++.-
T Consensus 14 ~~~~~~k~vlVTGas~g--IG~~~a~~l~~~G~~V~~~~r 51 (249)
T 1o5i_A 14 ELGIRDKGVLVLAASRG--IGRAVADVLSQEGAEVTICAR 51 (249)
T ss_dssp --CCTTCEEEEESCSSH--HHHHHHHHHHHTTCEEEEEES
T ss_pred HhccCCCEEEEECCCCH--HHHHHHHHHHHCCCEEEEEcC
Confidence 34689999999998654 999999999999999988753
No 394
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=47.78 E-value=28 Score=24.12 Aligned_cols=37 Identities=14% Similarity=0.159 Sum_probs=31.2
Q ss_pred cCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 36 GRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 36 g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
+.++++++.+.|-.. .+.+.++..++.-|.+|+++.-
T Consensus 14 ~~l~~k~vlVTGasg--gIG~~la~~l~~~G~~V~~~~r 50 (303)
T 1yxm_A 14 GLLQGQVAIVTGGAT--GIGKAIVKELLELGSNVVIASR 50 (303)
T ss_dssp TTTTTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeC
Confidence 458899999999755 4999999999999999888753
No 395
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=47.77 E-value=65 Score=24.35 Aligned_cols=44 Identities=11% Similarity=0.116 Sum_probs=33.4
Q ss_pred CcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCC---CCHHHHHH
Q psy4411 40 GLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLG---MPESIQEF 86 (99)
Q Consensus 40 g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~---~~~~~~~~ 86 (99)
+++++++|.+. +.-.++..++++|.+|+++.+...- +++++.+.
T Consensus 174 ~k~vvViGgG~---ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~ 220 (492)
T 3ic9_A 174 PKSVAVFGPGV---IGLELGQALSRLGVIVKVFGRSGSVANLQDEEMKRY 220 (492)
T ss_dssp CSEEEEESSCH---HHHHHHHHHHHTTCEEEEECCTTCCTTCCCHHHHHH
T ss_pred CCeEEEECCCH---HHHHHHHHHHHcCCeEEEEEECCcccccCCHHHHHH
Confidence 68999999764 7888899999999999999874321 34555444
No 396
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=47.73 E-value=36 Score=21.62 Aligned_cols=37 Identities=27% Similarity=0.391 Sum_probs=29.4
Q ss_pred CCcEEEEECCCCC-chhHHHHHHHHhhCCCEEEEECCC
Q psy4411 39 NGLTITMVGDLKN-GRTVHSLARLLTLYDVKLNYVSPP 75 (99)
Q Consensus 39 ~g~~i~~vGd~~n-~rv~~Sl~~~~~~~G~~v~~~~P~ 75 (99)
+-.+|+++|-..+ ++..+.++.-+...|.++.-+.|+
T Consensus 12 ~p~~vaVvGas~~~g~~G~~~~~~l~~~G~~v~~vnp~ 49 (140)
T 1iuk_A 12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPR 49 (140)
T ss_dssp HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGG
T ss_pred CCCEEEEECCCCCCCChHHHHHHHHHHCCCEEEEeCCC
Confidence 4578999996533 458888888888889998888886
No 397
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=47.49 E-value=25 Score=24.83 Aligned_cols=35 Identities=20% Similarity=0.234 Sum_probs=30.4
Q ss_pred cCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 36 GRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 36 g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
.++++++++++|-+ . +.++.+..++..| +|+++.-
T Consensus 124 ~~l~~k~vlV~GaG-g--iG~aia~~L~~~G-~V~v~~r 158 (287)
T 1nvt_A 124 GRVKDKNIVIYGAG-G--AARAVAFELAKDN-NIIIANR 158 (287)
T ss_dssp CCCCSCEEEEECCS-H--HHHHHHHHHTSSS-EEEEECS
T ss_pred CCcCCCEEEEECch-H--HHHHHHHHHHHCC-CEEEEEC
Confidence 36899999999975 4 9999999999999 9998764
No 398
>3pnx_A Putative sulfurtransferase DSRE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE GOL; 1.92A {Syntrophomonas wolfei}
Probab=47.42 E-value=53 Score=21.81 Aligned_cols=18 Identities=6% Similarity=-0.095 Sum_probs=14.0
Q ss_pred HHHHHHHHhcCCeEEEEe
Q psy4411 81 ESIQEFVASKGKQQEVYE 98 (99)
Q Consensus 81 ~~~~~~a~~~g~~~~~~~ 98 (99)
+++++.|++.|+++-.|+
T Consensus 105 ~eli~~a~~~Gvk~~aC~ 122 (160)
T 3pnx_A 105 SDLLSGARKKEVKFYACQ 122 (160)
T ss_dssp HHHHHHHHHTTCEEEEEH
T ss_pred HHHHHHHHHCCCEEEEeh
Confidence 567788889998887764
No 399
>4etn_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.10A {Bacillus subtilis} PDB: 4eti_A 1zgg_A
Probab=47.40 E-value=39 Score=22.86 Aligned_cols=56 Identities=13% Similarity=0.020 Sum_probs=34.3
Q ss_pred CcEEEEECCCC--CchhHHHHHHHHhh-C--CCEEEEECCC---CCCCCHHHHHHHHhcCCeEE
Q psy4411 40 GLTITMVGDLK--NGRTVHSLARLLTL-Y--DVKLNYVSPP---NLGMPESIQEFVASKGKQQE 95 (99)
Q Consensus 40 g~~i~~vGd~~--n~rv~~Sl~~~~~~-~--G~~v~~~~P~---~~~~~~~~~~~a~~~g~~~~ 95 (99)
..+|.||.-+| .|+++-.++.-... . +..+.-++-. |-.+++..++.+++.|+++.
T Consensus 34 ~~~VLFVC~gNiCRSpmAEai~r~~~~~~g~~~~v~SAGt~~~~G~~~dp~a~~vl~e~Gidis 97 (184)
T 4etn_A 34 SMDIIFVCTGNTSRSPMAEALFKSIAEREGLNVNVRSAGVFASPNGKATPHAVEALFEKHIALN 97 (184)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHHHHHTCCEEEEEEETTCCTTCBCCHHHHHHHHHTTCCCC
T ss_pred CCEEEEECCCchhHHHHHHHHHHHHHHhcCCcEEEEeeecCCcCCCCCCHHHHHHHHHcCCCch
Confidence 46899997654 23333334433332 2 4555555543 44688888899999998765
No 400
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=47.25 E-value=19 Score=25.35 Aligned_cols=35 Identities=6% Similarity=-0.017 Sum_probs=30.2
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
++++++++++|-+ .++++.+..+...|.+++++.-
T Consensus 116 ~~~~~~vlvlGaG---g~g~a~a~~L~~~G~~v~v~~R 150 (272)
T 1p77_A 116 LRPNQHVLILGAG---GATKGVLLPLLQAQQNIVLANR 150 (272)
T ss_dssp CCTTCEEEEECCS---HHHHTTHHHHHHTTCEEEEEES
T ss_pred CcCCCEEEEECCc---HHHHHHHHHHHHCCCEEEEEEC
Confidence 6889999999974 3999999999999999988764
No 401
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=47.14 E-value=26 Score=24.28 Aligned_cols=36 Identities=11% Similarity=0.016 Sum_probs=30.4
Q ss_pred cCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEEC
Q psy4411 36 GRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVS 73 (99)
Q Consensus 36 g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~ 73 (99)
..++++++.+.|-.. .+.+.++..++..|.+|+++.
T Consensus 40 ~~l~~k~vlITGasg--gIG~~la~~L~~~G~~V~~~~ 75 (285)
T 2c07_A 40 YCGENKVALVTGAGR--GIGREIAKMLAKSVSHVICIS 75 (285)
T ss_dssp CCCSSCEEEEESTTS--HHHHHHHHHHTTTSSEEEEEE
T ss_pred ccCCCCEEEEECCCc--HHHHHHHHHHHHcCCEEEEEc
Confidence 357789999999865 499999999999999988865
No 402
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=47.12 E-value=29 Score=24.93 Aligned_cols=31 Identities=26% Similarity=0.156 Sum_probs=25.9
Q ss_pred cEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 41 LTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 41 ~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
+||+++|.+. -.+.++.++.++|.+++++.|
T Consensus 2 K~I~ilGgg~---~g~~~~~~Ak~~G~~vv~vd~ 32 (363)
T 4ffl_A 2 KTICLVGGKL---QGFEAAYLSKKAGMKVVLVDK 32 (363)
T ss_dssp CEEEEECCSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 5899999753 667888999999999999875
No 403
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=47.00 E-value=29 Score=23.45 Aligned_cols=36 Identities=14% Similarity=0.119 Sum_probs=30.8
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
+++++++.+.|-..- +.+.++..++..|.+|++++-
T Consensus 6 ~l~~k~vlITGas~g--IG~~~a~~l~~~G~~V~~~~r 41 (261)
T 3n74_A 6 SLEGKVALITGAGSG--FGEGMAKRFAKGGAKVVIVDR 41 (261)
T ss_dssp TTTTCEEEEETTTSH--HHHHHHHHHHHTTCEEEEEES
T ss_pred cCCCCEEEEECCCch--HHHHHHHHHHHCCCEEEEEcC
Confidence 478899999998654 999999999999999988864
No 404
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=46.97 E-value=49 Score=24.34 Aligned_cols=43 Identities=19% Similarity=0.204 Sum_probs=35.6
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGM 79 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~ 79 (99)
.++|++++.+=.-+.-|+--||-.++.++|.++....|...++
T Consensus 33 ~L~gk~la~lF~e~STRTR~SFe~A~~~LGg~~i~l~~~~ss~ 75 (307)
T 3tpf_A 33 LLQDKTLAMIFEKNSTRTRMAFELAITELGGKALFLSSNDLQL 75 (307)
T ss_dssp TTTTCEEEEEESSCCHHHHHHHHHHHHHTTCEEEEECTTTCCT
T ss_pred hcCCCEEEEEecCCCcchHHhHHHHHHHcCCeEEEcCcccccC
Confidence 5899999887654555888999999999999999999976544
No 405
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=46.96 E-value=24 Score=25.77 Aligned_cols=32 Identities=16% Similarity=0.072 Sum_probs=27.2
Q ss_pred CcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 40 GLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 40 g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
-.||+++|-+. +..+++..+++-|.+|++.-+
T Consensus 6 ~~kI~vIGaG~---MG~~iA~~la~~G~~V~l~d~ 37 (319)
T 2dpo_A 6 AGDVLIVGSGL---VGRSWAMLFASGGFRVKLYDI 37 (319)
T ss_dssp -CEEEEECCSH---HHHHHHHHHHHTTCCEEEECS
T ss_pred CceEEEEeeCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 36899999865 999999999999999988655
No 406
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=46.94 E-value=34 Score=23.64 Aligned_cols=36 Identities=25% Similarity=0.237 Sum_probs=31.2
Q ss_pred cCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEEC
Q psy4411 36 GRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVS 73 (99)
Q Consensus 36 g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~ 73 (99)
+.++|+++.+.|-..- +...++..+++-|.+|+++.
T Consensus 7 ~~l~~k~~lVTGas~g--IG~aia~~la~~G~~V~~~~ 42 (286)
T 3uve_A 7 GRVEGKVAFVTGAARG--QGRSHAVRLAQEGADIIAVD 42 (286)
T ss_dssp CTTTTCEEEEESTTSH--HHHHHHHHHHHTTCEEEEEE
T ss_pred cccCCCEEEEeCCCch--HHHHHHHHHHHCCCeEEEEe
Confidence 3588999999998654 99999999999999998874
No 407
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=46.93 E-value=31 Score=24.32 Aligned_cols=31 Identities=13% Similarity=0.064 Sum_probs=26.5
Q ss_pred cEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 41 LTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 41 ~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
.+|+++|-++ +..+++..+++.|.+|++..+
T Consensus 16 ~~I~vIG~G~---mG~~~A~~l~~~G~~V~~~dr 46 (296)
T 3qha_A 16 LKLGYIGLGN---MGAPMATRMTEWPGGVTVYDI 46 (296)
T ss_dssp CCEEEECCST---THHHHHHHHTTSTTCEEEECS
T ss_pred CeEEEECcCH---HHHHHHHHHHHCCCeEEEEeC
Confidence 5899999765 899999999999999888754
No 408
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=46.92 E-value=22 Score=22.33 Aligned_cols=33 Identities=9% Similarity=-0.028 Sum_probs=27.7
Q ss_pred CcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCC
Q psy4411 40 GLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPP 75 (99)
Q Consensus 40 g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~ 75 (99)
+.+|.++|- |++.+.++..+...|.+++++.+.
T Consensus 3 ~~~vlI~G~---G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGH---SILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEECC---SHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEECC---CHHHHHHHHHHHHCCCCEEEEECC
Confidence 457889995 359999999999999999999873
No 409
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=46.65 E-value=59 Score=24.58 Aligned_cols=54 Identities=15% Similarity=0.176 Sum_probs=37.9
Q ss_pred CCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCC------------CCCCCHHHH----HHHHhcCCeEE
Q psy4411 39 NGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPP------------NLGMPESIQ----EFVASKGKQQE 95 (99)
Q Consensus 39 ~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~------------~~~~~~~~~----~~a~~~g~~~~ 95 (99)
.+++|++||-+. ..-+.+..+++.|.+|+++-.. ++.++.+++ +.+++.|+++.
T Consensus 121 ~~~~V~IIGgGp---AGl~aA~~L~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~~~~l~~~gv~~~ 190 (456)
T 2vdc_G 121 LGLSVGVIGAGP---AGLAAAEELRAKGYEVHVYDRYDRMGGLLVYGIPGFKLEKSVVERRVKLLADAGVIYH 190 (456)
T ss_dssp CCCCEEEECCSH---HHHHHHHHHHHHTCCEEEECSSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHHTTCEEE
T ss_pred CCCEEEEECCCH---HHHHHHHHHHHCCCeEEEEeccCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCcEEE
Confidence 467899999875 5667777788889999998653 344455554 34566777654
No 410
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=46.62 E-value=40 Score=19.39 Aligned_cols=33 Identities=18% Similarity=0.190 Sum_probs=27.2
Q ss_pred CCcEEEEECCCCCchhHHHHHHHHhhCC-CEEEEECC
Q psy4411 39 NGLTITMVGDLKNGRTVHSLARLLTLYD-VKLNYVSP 74 (99)
Q Consensus 39 ~g~~i~~vGd~~n~rv~~Sl~~~~~~~G-~~v~~~~P 74 (99)
.+.+|+++|- . .+.+.++..+...| .+++++..
T Consensus 4 ~~~~v~I~G~-G--~iG~~~~~~l~~~g~~~v~~~~r 37 (118)
T 3ic5_A 4 MRWNICVVGA-G--KIGQMIAALLKTSSNYSVTVADH 37 (118)
T ss_dssp TCEEEEEECC-S--HHHHHHHHHHHHCSSEEEEEEES
T ss_pred CcCeEEEECC-C--HHHHHHHHHHHhCCCceEEEEeC
Confidence 4578999997 3 49999999999999 78887765
No 411
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=46.53 E-value=41 Score=24.93 Aligned_cols=43 Identities=14% Similarity=0.215 Sum_probs=35.4
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGM 79 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~ 79 (99)
.++|++++.+=.-+.-|+--||-.++.++|.++....|..-.+
T Consensus 43 ~L~gk~l~~lF~e~STRTR~SFe~A~~~LGg~~i~l~~~~ss~ 85 (321)
T 1oth_A 43 LLQGKSLGMIFEKRSTRTRLSTETGFALLGGHPCFLTTQDIHL 85 (321)
T ss_dssp TTTTCEEEEEESSCCSHHHHHHHHHHHHTTCEEEEEETTTSCB
T ss_pred cCCCCEEEEEecCCCcchHHHHHHHHHHcCCeEEEECCCcCcC
Confidence 3899999877654445899999999999999999999976544
No 412
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=46.50 E-value=31 Score=23.07 Aligned_cols=36 Identities=14% Similarity=0.219 Sum_probs=30.4
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
+++++++.+.|-.. .+.+.++..++..|.+|+++.-
T Consensus 8 ~~~~k~vlITGasg--giG~~la~~l~~~G~~V~~~~r 43 (254)
T 2wsb_A 8 RLDGACAAVTGAGS--GIGLEICRAFAASGARLILIDR 43 (254)
T ss_dssp CCTTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeC
Confidence 47888999999765 4999999999999999888764
No 413
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=46.42 E-value=21 Score=25.32 Aligned_cols=32 Identities=22% Similarity=0.155 Sum_probs=27.5
Q ss_pred cEEEEEC-CCCCchhHHHHHHHHhhCCCEEEEECCC
Q psy4411 41 LTITMVG-DLKNGRTVHSLARLLTLYDVKLNYVSPP 75 (99)
Q Consensus 41 ~~i~~vG-d~~n~rv~~Sl~~~~~~~G~~v~~~~P~ 75 (99)
.+|+++| -++ +..+++..++..|.+|++..+.
T Consensus 22 ~~I~iIGg~G~---mG~~la~~l~~~G~~V~~~~~~ 54 (298)
T 2pv7_A 22 HKIVIVGGYGK---LGGLFARYLRASGYPISILDRE 54 (298)
T ss_dssp CCEEEETTTSH---HHHHHHHHHHTTTCCEEEECTT
T ss_pred CEEEEEcCCCH---HHHHHHHHHHhCCCeEEEEECC
Confidence 5899999 654 9999999999999999988764
No 414
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=46.33 E-value=32 Score=22.90 Aligned_cols=36 Identities=17% Similarity=0.124 Sum_probs=30.2
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
.++|+++.+.|-... +.+.++..++..|.+|+++.-
T Consensus 4 ~l~~k~vlITGasgg--iG~~~a~~l~~~G~~V~~~~r 39 (244)
T 3d3w_A 4 FLAGRRVLVTGAGKG--IGRGTVQALHATGARVVAVSR 39 (244)
T ss_dssp CCTTCEEEEESTTSH--HHHHHHHHHHHTTCEEEEEES
T ss_pred ccCCcEEEEECCCcH--HHHHHHHHHHHCCCEEEEEeC
Confidence 467889999998654 999999999999999888753
No 415
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=46.31 E-value=21 Score=24.63 Aligned_cols=37 Identities=19% Similarity=0.210 Sum_probs=31.2
Q ss_pred cCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 36 GRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 36 g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
.+++|+++.+.|-.. -+.+.++..++.-|.+|++++-
T Consensus 16 ~~l~~k~vlVTGas~--gIG~aia~~l~~~G~~V~~~~r 52 (266)
T 4egf_A 16 LRLDGKRALITGATK--GIGADIARAFAAAGARLVLSGR 52 (266)
T ss_dssp GCCTTCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEES
T ss_pred cCCCCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeC
Confidence 358899999999765 4999999999999999988764
No 416
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=46.22 E-value=55 Score=22.98 Aligned_cols=32 Identities=13% Similarity=0.122 Sum_probs=26.9
Q ss_pred CcEEEEECCCCCchhHHHHHHHHhhCCC---EEEEECC
Q psy4411 40 GLTITMVGDLKNGRTVHSLARLLTLYDV---KLNYVSP 74 (99)
Q Consensus 40 g~~i~~vGd~~n~rv~~Sl~~~~~~~G~---~v~~~~P 74 (99)
..||+++|-++ +..+++..+.+-|. ++++..+
T Consensus 3 ~~~I~iIG~G~---mG~aia~~l~~~g~~~~~V~v~dr 37 (280)
T 3tri_A 3 TSNITFIGGGN---MARNIVVGLIANGYDPNRICVTNR 37 (280)
T ss_dssp CSCEEEESCSH---HHHHHHHHHHHTTCCGGGEEEECS
T ss_pred CCEEEEEcccH---HHHHHHHHHHHCCCCCCeEEEEeC
Confidence 46899999864 99999999999887 7887765
No 417
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=46.22 E-value=30 Score=24.84 Aligned_cols=35 Identities=14% Similarity=0.182 Sum_probs=30.2
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCC-EEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDV-KLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~-~v~~~~P 74 (99)
++++++++++|-+ .++++.+..+...|. +++++.-
T Consensus 123 ~l~~k~vlvlGaG---g~g~aia~~L~~~G~~~v~v~~R 158 (281)
T 3o8q_A 123 LLKGATILLIGAG---GAARGVLKPLLDQQPASITVTNR 158 (281)
T ss_dssp CCTTCEEEEECCS---HHHHHHHHHHHTTCCSEEEEEES
T ss_pred CccCCEEEEECch---HHHHHHHHHHHhcCCCeEEEEEC
Confidence 6899999999975 499999999999996 8888765
No 418
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=46.16 E-value=34 Score=22.72 Aligned_cols=36 Identities=19% Similarity=0.183 Sum_probs=30.7
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
+++++++.+.|-... +.+.++..++.-|.+|+++.-
T Consensus 4 ~~~~~~vlVTGasgg--iG~~~a~~l~~~G~~V~~~~r 39 (244)
T 1cyd_A 4 NFSGLRALVTGAGKG--IGRDTVKALHASGAKVVAVTR 39 (244)
T ss_dssp CCTTCEEEEESTTSH--HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCEEEEeCCCch--HHHHHHHHHHHCCCEEEEEeC
Confidence 578899999998654 999999999999999988764
No 419
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=46.05 E-value=75 Score=22.75 Aligned_cols=45 Identities=18% Similarity=0.127 Sum_probs=32.5
Q ss_pred cEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCe
Q psy4411 41 LTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQ 93 (99)
Q Consensus 41 ~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~ 93 (99)
+||+|||=++ +...++.-+.+-|.+|++ |...++-.+.+.+.|++
T Consensus 4 ~kIgfIGlG~---MG~~mA~~L~~~G~~v~v-----~dr~~~~~~~l~~~Ga~ 48 (300)
T 3obb_A 4 KQIAFIGLGH---MGAPMATNLLKAGYLLNV-----FDLVQSAVDGLVAAGAS 48 (300)
T ss_dssp CEEEEECCST---THHHHHHHHHHTTCEEEE-----ECSSHHHHHHHHHTTCE
T ss_pred CEEEEeeehH---HHHHHHHHHHhCCCeEEE-----EcCCHHHHHHHHHcCCE
Confidence 4899999865 777777777788988876 45566666666666544
No 420
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=45.95 E-value=36 Score=23.33 Aligned_cols=36 Identities=17% Similarity=0.155 Sum_probs=31.2
Q ss_pred cCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEEC
Q psy4411 36 GRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVS 73 (99)
Q Consensus 36 g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~ 73 (99)
.+++|+++.+.|-.. -+...++..++.-|.+|+++.
T Consensus 9 ~~l~gk~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~ 44 (278)
T 3sx2_A 9 GPLTGKVAFITGAAR--GQGRAHAVRLAADGADIIAVD 44 (278)
T ss_dssp CTTTTCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCCEEEEECCCC--hHHHHHHHHHHHCCCeEEEEe
Confidence 468899999999765 499999999999999998875
No 421
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=45.61 E-value=54 Score=23.20 Aligned_cols=44 Identities=20% Similarity=0.228 Sum_probs=32.6
Q ss_pred cEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCeE
Q psy4411 41 LTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQQ 94 (99)
Q Consensus 41 ~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~ 94 (99)
.||+++|-+. +..+++..+++-|.+|++..... . +.+++.|..+
T Consensus 3 mkI~IiGaGa---iG~~~a~~L~~~g~~V~~~~r~~------~-~~i~~~g~~~ 46 (312)
T 3hn2_A 3 LRIAIVGAGA---LGLYYGALLQRSGEDVHFLLRRD------Y-EAIAGNGLKV 46 (312)
T ss_dssp -CEEEECCST---THHHHHHHHHHTSCCEEEECSTT------H-HHHHHTCEEE
T ss_pred CEEEEECcCH---HHHHHHHHHHHCCCeEEEEEcCc------H-HHHHhCCCEE
Confidence 4799999876 88888888898899999988743 1 4455566443
No 422
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=45.61 E-value=32 Score=23.99 Aligned_cols=37 Identities=11% Similarity=-0.043 Sum_probs=29.6
Q ss_pred cCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 36 GRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 36 g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
..++++++.+.|-.. -+...++..++.-|.+|.++.-
T Consensus 24 ~~~~~k~~lVTGas~--GIG~aia~~la~~G~~V~~~~r 60 (283)
T 3v8b_A 24 MNQPSPVALITGAGS--GIGRATALALAADGVTVGALGR 60 (283)
T ss_dssp ---CCCEEEEESCSS--HHHHHHHHHHHHTTCEEEEEES
T ss_pred cCCCCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEeC
Confidence 457888999999765 4999999999999999998864
No 423
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=45.38 E-value=32 Score=25.26 Aligned_cols=34 Identities=9% Similarity=0.053 Sum_probs=29.2
Q ss_pred CCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 38 VNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 38 l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
+++.+++++|-+ .+.+..+..+..+|++|+++..
T Consensus 165 l~~~~VlViGaG---gvG~~aa~~a~~~Ga~V~v~dr 198 (361)
T 1pjc_A 165 VKPGKVVILGGG---VVGTEAAKMAVGLGAQVQIFDI 198 (361)
T ss_dssp BCCCEEEEECCS---HHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCEEEEECCC---HHHHHHHHHHHhCCCEEEEEeC
Confidence 677899999973 4999999999999998888754
No 424
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=45.37 E-value=33 Score=23.31 Aligned_cols=36 Identities=8% Similarity=0.095 Sum_probs=30.8
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
+++|+++.+.|-..- +.+.++..++..|.+|+++.-
T Consensus 4 ~l~~k~~lVTGas~g--IG~aia~~l~~~G~~V~~~~r 39 (257)
T 3tpc_A 4 QLKSRVFIVTGASSG--LGAAVTRMLAQEGATVLGLDL 39 (257)
T ss_dssp CCTTCEEEEESTTSH--HHHHHHHHHHHTTCEEEEEES
T ss_pred ccCCCEEEEeCCCCH--HHHHHHHHHHHCCCEEEEEeC
Confidence 478899999998654 999999999999999988764
No 425
>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}
Probab=45.35 E-value=37 Score=22.40 Aligned_cols=53 Identities=13% Similarity=0.028 Sum_probs=33.5
Q ss_pred HhhccCEEEEccCCchhH----HHHhcCCCCcEEEEECCCC-CchhHHHHHHHHhhCCCEEEEEC
Q psy4411 14 LSGYADVIVLRHPEPGAV----KEEMGRVNGLTITMVGDLK-NGRTVHSLARLLTLYDVKLNYVS 73 (99)
Q Consensus 14 ls~y~D~iv~R~~~~~~~----~e~~g~l~g~~i~~vGd~~-n~rv~~Sl~~~~~~~G~~v~~~~ 73 (99)
+..|+|.++.....+... .+++| ++...+.++||.. | -+.++...|+.+..+.
T Consensus 150 l~~~f~~i~~~~kp~~~~~~~~~~~l~-~~~~~~i~iGD~~~~------Di~~a~~aG~~~~~v~ 207 (251)
T 2pke_A 150 LSDLFPRIEVVSEKDPQTYARVLSEFD-LPAERFVMIGNSLRS------DVEPVLAIGGWGIYTP 207 (251)
T ss_dssp GGGTCCCEEEESCCSHHHHHHHHHHHT-CCGGGEEEEESCCCC------CCHHHHHTTCEEEECC
T ss_pred cHHhCceeeeeCCCCHHHHHHHHHHhC-cCchhEEEECCCchh------hHHHHHHCCCEEEEEC
Confidence 345678777755443333 34443 4556799999986 5 1346667799887773
No 426
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=45.25 E-value=38 Score=23.20 Aligned_cols=36 Identities=17% Similarity=0.126 Sum_probs=30.0
Q ss_pred CCCCcEEEEECC--CCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGD--LKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd--~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
.++|+++.+.|- .. .+.+.++..++..|.+|+++.-
T Consensus 4 ~l~~k~vlVTGa~~s~--gIG~aia~~l~~~G~~V~~~~r 41 (269)
T 2h7i_A 4 LLDGKRILVSGIITDS--SIAFHIARVAQEQGAQLVLTGF 41 (269)
T ss_dssp TTTTCEEEECCCSSTT--SHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCCCEEEEECCCCCC--chHHHHHHHHHHCCCEEEEEec
Confidence 478889999997 44 4999999999999999988753
No 427
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=45.16 E-value=73 Score=21.96 Aligned_cols=44 Identities=11% Similarity=0.035 Sum_probs=31.0
Q ss_pred cEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCC
Q psy4411 41 LTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGK 92 (99)
Q Consensus 41 ~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~ 92 (99)
.+|+++|-+. +...++..+...|.+|.+..+ +++-.+.+++.|.
T Consensus 6 m~i~iiG~G~---~G~~~a~~l~~~g~~V~~~~~-----~~~~~~~~~~~g~ 49 (299)
T 1vpd_A 6 MKVGFIGLGI---MGKPMSKNLLKAGYSLVVSDR-----NPEAIADVIAAGA 49 (299)
T ss_dssp CEEEEECCST---THHHHHHHHHHTTCEEEEECS-----CHHHHHHHHHTTC
T ss_pred ceEEEECchH---HHHHHHHHHHhCCCEEEEEeC-----CHHHHHHHHHCCC
Confidence 4899999644 889999999999999877654 3444444444443
No 428
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=45.15 E-value=32 Score=24.58 Aligned_cols=36 Identities=11% Similarity=0.089 Sum_probs=31.4
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
+|+|+++.+.|-.. -+.+..+..++.-|.+|.++.-
T Consensus 26 rL~gKvalVTGas~--GIG~aiA~~la~~Ga~V~i~~r 61 (273)
T 4fgs_A 26 RLNAKIAVITGATS--GIGLAAAKRFVAEGARVFITGR 61 (273)
T ss_dssp TTTTCEEEEESCSS--HHHHHHHHHHHHTTCEEEEEES
T ss_pred hhCCCEEEEeCcCC--HHHHHHHHHHHHCCCEEEEEEC
Confidence 59999988999765 4999999999999999998863
No 429
>3b3e_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.80A {Bacillus subtilis} PDB: 3b3d_A
Probab=45.07 E-value=37 Score=24.54 Aligned_cols=90 Identities=19% Similarity=0.279 Sum_probs=48.0
Q ss_pred CHHHHHHHHhh-ccCEEEEccCCchhH---HHHhcCC-CCcEEEEECCCCCchhHHHHHHHHhhCCCE--EEEECCCCCC
Q psy4411 6 NLIDTVAVLSG-YADVIVLRHPEPGAV---KEEMGRV-NGLTITMVGDLKNGRTVHSLARLLTLYDVK--LNYVSPPNLG 78 (99)
Q Consensus 6 s~~Dta~vls~-y~D~iv~R~~~~~~~---~e~~g~l-~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~--v~~~~P~~~~ 78 (99)
+++++.+-|.. |.|++.+--+....+ ++.+..+ +.=+|-++|=.|+ -..-+..++...+.. +..+--.-+.
T Consensus 127 ~~e~SL~rLg~dyiDl~~lH~p~~~~~~e~~~al~~l~~~Gkir~iGvSn~--~~~~l~~~~~~~~~~p~~~Q~~~~~~~ 204 (310)
T 3b3e_A 127 AFEKSLERLQLDYLDLYLIHWPGKDKYKDTWRALEKLYKDGKIRAIGVSNF--QVHHLEELLKDAEIKPMVNQVEFHPRL 204 (310)
T ss_dssp HHHHHHHHHTCSCEEEEEESCCCSSCHHHHHHHHHHHHHTTSEEEEEEESC--CHHHHHHHHHHCSSCCSEEEEECBTTB
T ss_pred HHHHHHHHhCCCeeEEEEeeCCCcccHHHHHHHHHHHHHcCCcceEeecCC--CHHHHHHHHHhcCCCcceeeeeccCcc
Confidence 45666666765 899999987765433 2222111 1124667776555 344444444444322 2222111233
Q ss_pred CCHHHHHHHHhcCCeEEEE
Q psy4411 79 MPESIQEFVASKGKQQEVY 97 (99)
Q Consensus 79 ~~~~~~~~a~~~g~~~~~~ 97 (99)
..+++++.++++|+.+..+
T Consensus 205 ~~~~l~~~~~~~gi~v~a~ 223 (310)
T 3b3e_A 205 TQKELRDYCKGQGIQLEAW 223 (310)
T ss_dssp CCHHHHHHHHHHTCEEEEE
T ss_pred CCHHHHHHHHHcCCEEEEe
Confidence 4567778888888776544
No 430
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=45.02 E-value=34 Score=23.56 Aligned_cols=37 Identities=24% Similarity=0.265 Sum_probs=31.0
Q ss_pred cCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 36 GRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 36 g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
++++++++.+.|-.. -+.+.++..++..|.+|+++.-
T Consensus 2 ~~l~~k~vlITGas~--gIG~aia~~l~~~G~~V~~~~r 38 (263)
T 2a4k_A 2 GRLSGKTILVTGAAS--GIGRAALDLFAREGASLVAVDR 38 (263)
T ss_dssp CTTTTCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEeC
Confidence 457889999999755 4999999999999999988753
No 431
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=44.82 E-value=26 Score=24.32 Aligned_cols=37 Identities=14% Similarity=0.100 Sum_probs=29.2
Q ss_pred cCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 36 GRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 36 g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
.+++|+++.+.|-.. .+.+.++..++..|.+|++++-
T Consensus 19 ~~l~~k~~lVTGas~--gIG~aia~~L~~~G~~V~~~~r 55 (288)
T 2x9g_A 19 SHMEAPAAVVTGAAK--RIGRAIAVKLHQTGYRVVIHYH 55 (288)
T ss_dssp ---CCCEEEETTCSS--HHHHHHHHHHHHHTCEEEEEES
T ss_pred cCCCCCEEEEeCCCC--HHHHHHHHHHHHCCCeEEEEeC
Confidence 458888888888755 4999999999999999988764
No 432
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=44.74 E-value=70 Score=21.60 Aligned_cols=38 Identities=18% Similarity=0.271 Sum_probs=30.7
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
+++|+++.+.|-...+.+...++..++..|.+|.++.-
T Consensus 4 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r 41 (266)
T 3oig_A 4 SLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYA 41 (266)
T ss_dssp CCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEES
T ss_pred ccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecC
Confidence 47889999999752124999999999999999988754
No 433
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=44.72 E-value=26 Score=23.43 Aligned_cols=36 Identities=14% Similarity=0.124 Sum_probs=30.2
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
+++++++.+.|-.. .+...++..++..|.+|+++.-
T Consensus 3 ~~~~k~vlVtGasg--giG~~~a~~l~~~G~~V~~~~r 38 (251)
T 1zk4_A 3 RLDGKVAIITGGTL--GIGLAIATKFVEEGAKVMITGR 38 (251)
T ss_dssp TTTTCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCcEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeC
Confidence 47788999999755 4999999999999999888763
No 434
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=44.71 E-value=32 Score=23.63 Aligned_cols=43 Identities=28% Similarity=0.015 Sum_probs=30.9
Q ss_pred EEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCC
Q psy4411 42 TITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGK 92 (99)
Q Consensus 42 ~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~ 92 (99)
+|+++|-+ ++..+++..+.+.|.+|++..+ +++-.+.+++.|.
T Consensus 2 ~i~iiG~G---~~G~~~a~~l~~~g~~V~~~~~-----~~~~~~~~~~~g~ 44 (279)
T 2f1k_A 2 KIGVVGLG---LIGASLAGDLRRRGHYLIGVSR-----QQSTCEKAVERQL 44 (279)
T ss_dssp EEEEECCS---HHHHHHHHHHHHTTCEEEEECS-----CHHHHHHHHHTTS
T ss_pred EEEEEcCc---HHHHHHHHHHHHCCCEEEEEEC-----CHHHHHHHHhCCC
Confidence 78999954 3999999999999998887754 3444444555444
No 435
>3r89_A Orotidine 5'-phosphate decarboxylase; PSI-biology, midwest center for structural genomics, MCSG, O 5-phosphate decarboxylase, lyase; 1.84A {Anaerococcus prevotii}
Probab=44.66 E-value=24 Score=25.92 Aligned_cols=46 Identities=13% Similarity=0.246 Sum_probs=33.9
Q ss_pred CCCCCchhHHHHHHHHhh--CCCEEEEECCC-CCCCCHHHHHHHHhcCCeE
Q psy4411 47 GDLKNGRTVHSLARLLTL--YDVKLNYVSPP-NLGMPESIQEFVASKGKQQ 94 (99)
Q Consensus 47 Gd~~n~rv~~Sl~~~~~~--~G~~v~~~~P~-~~~~~~~~~~~a~~~g~~~ 94 (99)
||..| ++...+..+.+ +|.+.+.++|- |...-+.+++.+++.|..+
T Consensus 102 ~DIpn--Tv~~~a~~~~~~~lg~D~vTvh~~~G~~~l~~~~~~a~~~~kgv 150 (290)
T 3r89_A 102 SDIAA--SAKMYAKAHFEGDFETDFITLNPYMGMDSIEPYEEYIEKGDKGV 150 (290)
T ss_dssp CCCHH--HHHHHHHHHHSGGGCCSEEEECCTTCGGGTGGGHHHHHTTSCEE
T ss_pred cCcHH--HHHHHHHHHhccccCCCEEEEcccCCHHHHHHHHHHHHhcCCeE
Confidence 89887 87778877777 99999999994 5555666777776655433
No 436
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=44.61 E-value=26 Score=24.02 Aligned_cols=36 Identities=17% Similarity=0.118 Sum_probs=28.0
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
.++|+++.+.|-.. -+.+.++..++..|.+|++++-
T Consensus 8 ~~~~k~~lVTGas~--gIG~~ia~~l~~~G~~V~~~~r 43 (276)
T 1mxh_A 8 ASECPAAVITGGAR--RIGHSIAVRLHQQGFRVVVHYR 43 (276)
T ss_dssp ---CCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEES
T ss_pred ccCCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeC
Confidence 46778888888755 4999999999999999988764
No 437
>1u2p_A Ptpase, low molecular weight protein-tyrosine- phosphatase; hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 1u2q_A
Probab=44.47 E-value=62 Score=21.04 Aligned_cols=55 Identities=11% Similarity=0.088 Sum_probs=34.0
Q ss_pred cEEEEECCCC--CchhHHHHHHHHh-h--CC--CEEEEECCC----CCCCCHHHHHHHHhcCCeEE
Q psy4411 41 LTITMVGDLK--NGRTVHSLARLLT-L--YD--VKLNYVSPP----NLGMPESIQEFVASKGKQQE 95 (99)
Q Consensus 41 ~~i~~vGd~~--n~rv~~Sl~~~~~-~--~G--~~v~~~~P~----~~~~~~~~~~~a~~~g~~~~ 95 (99)
.+|.||.-+| .|+++-.++.-.. . ++ ..+.-++-. |-.+++..++.+++.|++++
T Consensus 5 ~~VLFVC~gN~cRSpmAEal~~~~~~~~gl~~~~~v~SAGt~~~~~G~~~~p~a~~~l~~~Gid~s 70 (163)
T 1u2p_A 5 LHVTFVCTGNICRSPMAEKMFAQQLRHRGLGDAVRVTSAGTGNWHVGSCADERAAGVLRAHGYPTD 70 (163)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHHHTTCTTTEEEEEEESSCTTTTCCCCHHHHHHHHHTTCCCC
T ss_pred CEEEEEcCCcHhHHHHHHHHHHHHHHHCCCCCcEEEEecccCCCcCCCCCCHHHHHHHHHcCcCCC
Confidence 5788886644 2344444444332 2 23 455555544 44688889999999998765
No 438
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=44.40 E-value=43 Score=21.55 Aligned_cols=33 Identities=12% Similarity=0.059 Sum_probs=25.6
Q ss_pred cEEEEECCCCCchhHHHHHHHHhhCCCEEEEEC
Q psy4411 41 LTITMVGDLKNGRTVHSLARLLTLYDVKLNYVS 73 (99)
Q Consensus 41 ~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~ 73 (99)
.+|.++|-+....++..+...+.++|..+....
T Consensus 40 ~~I~i~G~G~S~~~a~~~~~~l~~~g~~~~~~~ 72 (187)
T 3sho_A 40 DHVIVVGMGFSAAVAVFLGHGLNSLGIRTTVLT 72 (187)
T ss_dssp SEEEEECCGGGHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CEEEEEecCchHHHHHHHHHHHHhcCCCEEEec
Confidence 578888877766778888888888888777776
No 439
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=44.38 E-value=70 Score=21.50 Aligned_cols=92 Identities=12% Similarity=0.113 Sum_probs=59.6
Q ss_pred CCCHHHHHHHHhhc-cCEEEEccCCc----------------hhH---HHHhcCCCCcEEEEECCC--CCchhHHHHHHH
Q psy4411 4 YSNLIDTVAVLSGY-ADVIVLRHPEP----------------GAV---KEEMGRVNGLTITMVGDL--KNGRTVHSLARL 61 (99)
Q Consensus 4 ~Es~~Dta~vls~y-~D~iv~R~~~~----------------~~~---~e~~g~l~g~~i~~vGd~--~n~rv~~Sl~~~ 61 (99)
..++.++.+.+..+ +|.|-++.... ..+ ++.. .-.|+++..++-. ..-.-....+..
T Consensus 21 ~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gl~i~~~~~~~~~~~~~~~~~i~~ 99 (262)
T 3p6l_A 21 LFPLTEALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELA-ASKGIKIVGTGVYVAEKSSDWEKMFKF 99 (262)
T ss_dssp TSCHHHHHHHHHHTTCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHH-HHTTCEEEEEEEECCSSTTHHHHHHHH
T ss_pred CCCHHHHHHHHHHcCCCEEeecCCcccccccccccccccCCHHHHHHHHHHH-HHcCCeEEEEeccCCccHHHHHHHHHH
Confidence 46889999999998 89999985421 111 1111 1245666544311 111367889999
Q ss_pred HhhCCCEEEEECCCCCCCCHHHHHHHHhcCCeEEEE
Q psy4411 62 LTLYDVKLNYVSPPNLGMPESIQEFVASKGKQQEVY 97 (99)
Q Consensus 62 ~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~~~~ 97 (99)
|..+|++.+.+.|. .+--..+.+.|++.|+++-+.
T Consensus 100 A~~lGa~~v~~~~~-~~~~~~l~~~a~~~gv~l~~E 134 (262)
T 3p6l_A 100 AKAMDLEFITCEPA-LSDWDLVEKLSKQYNIKISVH 134 (262)
T ss_dssp HHHTTCSEEEECCC-GGGHHHHHHHHHHHTCEEEEE
T ss_pred HHHcCCCEEEecCC-HHHHHHHHHHHHHhCCEEEEE
Confidence 99999988888773 222245667788889887654
No 440
>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}
Probab=44.36 E-value=97 Score=24.45 Aligned_cols=54 Identities=9% Similarity=0.064 Sum_probs=39.5
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCeEE
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQQE 95 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~~ 95 (99)
+++|+++.+.|-.. -+.+.++..+++-|.+|++..-+ ..+++.+++++.|++..
T Consensus 319 ~l~gkvalVTGas~--GIG~a~A~~la~~Ga~Vv~~~~~---~~~~~~~~i~~~g~~~~ 372 (604)
T 2et6_A 319 SLKDKVVLITGAGA--GLGKEYAKWFAKYGAKVVVNDFK---DATKTVDEIKAAGGEAW 372 (604)
T ss_dssp CCTTCEEEESSCSS--HHHHHHHHHHHHTTCEEEEECSS---CCHHHHHHHHHTTCEEE
T ss_pred ccCCCeEEEECcch--HHHHHHHHHHHHCCCEEEEEeCc---cHHHHHHHHHhcCCeEE
Confidence 47787777778755 49999999999999999987632 23556666666665543
No 441
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=44.34 E-value=66 Score=22.13 Aligned_cols=36 Identities=11% Similarity=0.146 Sum_probs=30.7
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
+++|+++.+.|-.. -+.+.++..++.-|.+|.+..-
T Consensus 24 ~l~gk~vlVTGas~--gIG~aia~~la~~G~~V~~~~r 59 (266)
T 3grp_A 24 KLTGRKALVTGATG--GIGEAIARCFHAQGAIVGLHGT 59 (266)
T ss_dssp CCTTCEEEESSTTS--HHHHHHHHHHHHTTCEEEEEES
T ss_pred ccCCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeC
Confidence 48899999999765 4999999999999999988764
No 442
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=44.27 E-value=24 Score=24.95 Aligned_cols=34 Identities=18% Similarity=0.194 Sum_probs=29.2
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCC-EEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDV-KLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~-~v~~~~P 74 (99)
.++| +++++|-+. ++++.+..+...|. +++++..
T Consensus 106 ~~~~-~vliiGaGg---~a~ai~~~L~~~G~~~I~v~nR 140 (253)
T 3u62_A 106 EVKE-PVVVVGAGG---AARAVIYALLQMGVKDIWVVNR 140 (253)
T ss_dssp CCCS-SEEEECCSH---HHHHHHHHHHHTTCCCEEEEES
T ss_pred CCCC-eEEEECcHH---HHHHHHHHHHHcCCCEEEEEeC
Confidence 5788 999999854 99999999999998 8888765
No 443
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=44.24 E-value=33 Score=24.12 Aligned_cols=31 Identities=13% Similarity=0.111 Sum_probs=27.0
Q ss_pred cEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 41 LTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 41 ~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
.+|+++|-++ +..+++..+++-|.+|++..+
T Consensus 16 ~~I~VIG~G~---mG~~iA~~la~~G~~V~~~d~ 46 (302)
T 1f0y_A 16 KHVTVIGGGL---MGAGIAQVAAATGHTVVLVDQ 46 (302)
T ss_dssp CEEEEECCSH---HHHHHHHHHHHTTCEEEEECS
T ss_pred CEEEEECCCH---HHHHHHHHHHhCCCeEEEEEC
Confidence 5899999865 999999999999999988765
No 444
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=44.21 E-value=39 Score=24.03 Aligned_cols=33 Identities=21% Similarity=0.159 Sum_probs=28.3
Q ss_pred cEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCC
Q psy4411 41 LTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPN 76 (99)
Q Consensus 41 ~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~ 76 (99)
.+|+++|-+. +..+++..+++-|.+|++.....
T Consensus 3 mkI~IiGaGa---iG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGA---IGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCH---HHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCH---HHHHHHHHHHhCCCeEEEEeCCh
Confidence 4899999865 88999999999999999998743
No 445
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=44.19 E-value=44 Score=23.79 Aligned_cols=36 Identities=19% Similarity=0.131 Sum_probs=31.1
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
+++|+++.+.|-..- +...++..++.-|.+|+++.-
T Consensus 5 ~l~~k~vlVTGas~g--IG~~la~~l~~~G~~Vv~~~r 40 (319)
T 3ioy_A 5 DFAGRTAFVTGGANG--VGIGLVRQLLNQGCKVAIADI 40 (319)
T ss_dssp CCTTCEEEEETTTST--HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCEEEEcCCchH--HHHHHHHHHHHCCCEEEEEEC
Confidence 578899999998665 999999999999999988764
No 446
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=44.19 E-value=29 Score=23.91 Aligned_cols=37 Identities=11% Similarity=0.064 Sum_probs=31.2
Q ss_pred cCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 36 GRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 36 g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
.+++|+++.+.|-.. -+...++..++..|.+|+++.-
T Consensus 26 ~~l~~k~vlVTGas~--GIG~aia~~l~~~G~~Vi~~~r 62 (281)
T 3ppi_A 26 KQFEGASAIVSGGAG--GLGEATVRRLHADGLGVVIADL 62 (281)
T ss_dssp GGGTTEEEEEETTTS--HHHHHHHHHHHHTTCEEEEEES
T ss_pred hccCCCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeC
Confidence 358889999999755 4999999999999999988764
No 447
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=44.11 E-value=31 Score=22.92 Aligned_cols=34 Identities=15% Similarity=0.081 Sum_probs=28.0
Q ss_pred CCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 39 NGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 39 ~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
+++++.+.|-.. .+...++..++.-|.+|.+++-
T Consensus 1 ~~k~vlITGas~--gIG~~ia~~l~~~G~~V~~~~r 34 (235)
T 3l77_A 1 EMKVAVITGASR--GIGEAIARALARDGYALALGAR 34 (235)
T ss_dssp CCCEEEEESCSS--HHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeC
Confidence 367888888755 4999999999999999888765
No 448
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=44.11 E-value=72 Score=21.60 Aligned_cols=37 Identities=14% Similarity=0.173 Sum_probs=30.0
Q ss_pred CCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 38 VNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 38 l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
++++++.+.|-...+-+.+.++..++..|.+|+++.-
T Consensus 7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r 43 (265)
T 1qsg_A 7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQ 43 (265)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEES
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcC
Confidence 6788999999751124999999999999999988764
No 449
>3f7j_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.70A {Bacillus subtilis} PDB: 3d3f_A*
Probab=44.08 E-value=42 Score=23.66 Aligned_cols=90 Identities=19% Similarity=0.268 Sum_probs=47.6
Q ss_pred CHHHHHHHHhh-ccCEEEEccCCchhH---HHHhcC-CCCcEEEEECCCCCchhHHHHHHHHhhCCCE--EEEECCCCCC
Q psy4411 6 NLIDTVAVLSG-YADVIVLRHPEPGAV---KEEMGR-VNGLTITMVGDLKNGRTVHSLARLLTLYDVK--LNYVSPPNLG 78 (99)
Q Consensus 6 s~~Dta~vls~-y~D~iv~R~~~~~~~---~e~~g~-l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~--v~~~~P~~~~ 78 (99)
+++++.+-|.. |.|++.+-.+..... ++.+.. .+.=+|-++|=.|+ -..-+..++...+.. +..+--.-+.
T Consensus 93 ~~~~SL~rLg~dyiDl~~lH~p~~~~~~~~~~~l~~l~~~Gkir~iGvSn~--~~~~l~~~~~~~~~~~~~~Q~~~~~~~ 170 (276)
T 3f7j_A 93 AFEKSLERLQLDYLDLYLIHWPGKDKYKDTWRALEKLYKDGKIRAIGVSNF--QVHHLEELLKDAEIKPMVNQVEFHPRL 170 (276)
T ss_dssp HHHHHHHHHTCSCEEEEEESCCCSSSHHHHHHHHHHHHHTTSEEEEEEESC--CHHHHHHHHHHCSSCCSEEEEECBTTB
T ss_pred HHHHHHHHhCCCeeEEEEEecCCCCcHHHHHHHHHHHHHcCCccEEEeccC--CHHHHHHHHHhcCCCceeeeeeecccc
Confidence 45666666775 899999877665433 221111 11124566776555 334444444443322 2222111233
Q ss_pred CCHHHHHHHHhcCCeEEEE
Q psy4411 79 MPESIQEFVASKGKQQEVY 97 (99)
Q Consensus 79 ~~~~~~~~a~~~g~~~~~~ 97 (99)
..+++++.++++|+.+..+
T Consensus 171 ~~~~l~~~~~~~gi~v~a~ 189 (276)
T 3f7j_A 171 TQKELRDYCKGQGIQLEAW 189 (276)
T ss_dssp CCHHHHHHHHHHTCEEEEE
T ss_pred CCHHHHHHHHHCCCEEEEe
Confidence 4567778888888776543
No 450
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=43.97 E-value=64 Score=21.66 Aligned_cols=38 Identities=13% Similarity=-0.038 Sum_probs=30.0
Q ss_pred cCCCCcEEEEECCCCCchhHHHHHHHHhhCC---CEEEEECCC
Q psy4411 36 GRVNGLTITMVGDLKNGRTVHSLARLLTLYD---VKLNYVSPP 75 (99)
Q Consensus 36 g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G---~~v~~~~P~ 75 (99)
..++++++.+.|-.. -+...++..++..| .+|++++-.
T Consensus 17 ~~~~~k~vlITGasg--gIG~~la~~L~~~G~~~~~V~~~~r~ 57 (267)
T 1sny_A 17 RGSHMNSILITGCNR--GLGLGLVKALLNLPQPPQHLFTTCRN 57 (267)
T ss_dssp ---CCSEEEESCCSS--HHHHHHHHHHHTSSSCCSEEEEEESC
T ss_pred cCCCCCEEEEECCCC--cHHHHHHHHHHhcCCCCcEEEEEecC
Confidence 358889999999755 49999999999999 899888753
No 451
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=43.95 E-value=43 Score=21.62 Aligned_cols=34 Identities=15% Similarity=0.039 Sum_probs=23.2
Q ss_pred CCCCcEEEEECC--CCCc---hhHHHHHHHHhhCCCEEE
Q psy4411 37 RVNGLTITMVGD--LKNG---RTVHSLARLLTLYDVKLN 70 (99)
Q Consensus 37 ~l~g~~i~~vGd--~~n~---rv~~Sl~~~~~~~G~~v~ 70 (99)
.++|++++.++- ...+ +...++...+..+|+.+.
T Consensus 105 ~l~~K~~~~~~t~g~~~~~~~~~~~~l~~~l~~~g~~~~ 143 (200)
T 2a5l_A 105 SLVGKPAAVFTSTASLHGGQETTQLSMLLPLLHHGMLVL 143 (200)
T ss_dssp TTTTCEEEEEEEBSCSSCCHHHHHHHHHHHHHHTTCEEC
T ss_pred ccCCCEEEEEEecCCCCCCHHHHHHHHHHHHHHCCCEEE
Confidence 578999887752 2211 456778888888898764
No 452
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=43.93 E-value=23 Score=26.96 Aligned_cols=53 Identities=23% Similarity=0.172 Sum_probs=33.5
Q ss_pred CcEEEEECCCCCchhHHHHHHHHh----hCCCEEEEECCCC----CCCCHHH----HHHHHhcCCeEE
Q psy4411 40 GLTITMVGDLKNGRTVHSLARLLT----LYDVKLNYVSPPN----LGMPESI----QEFVASKGKQQE 95 (99)
Q Consensus 40 g~~i~~vGd~~n~rv~~Sl~~~~~----~~G~~v~~~~P~~----~~~~~~~----~~~a~~~g~~~~ 95 (99)
+++++++|.+. +.--++..++ ++|.+|+++.|.. -.+++++ .+.+++.|+++.
T Consensus 180 ~~~vvViGgG~---iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~~~l~~~~~~~~~~~l~~~GV~v~ 244 (493)
T 1m6i_A 180 VKSITIIGGGF---LGSELACALGRKARALGTEVIQLFPEKGNMGKILPEYLSNWTMEKVRREGVKVM 244 (493)
T ss_dssp CSEEEEECCSH---HHHHHHHHHHHHHHHHTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHTTTCEEE
T ss_pred CCeEEEECCCH---HHHHHHHHHHhhhhhcCCEEEEEecCcccccccCCHHHHHHHHHHHHhcCCEEE
Confidence 68999999764 4444444443 3789999998753 1234544 344567777664
No 453
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=43.61 E-value=38 Score=23.49 Aligned_cols=35 Identities=20% Similarity=0.127 Sum_probs=28.7
Q ss_pred CCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 38 VNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 38 l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
+.++++.+.|-.. -+.+.++..++.-|.+|++++-
T Consensus 2 l~~k~~lVTGas~--GIG~aia~~la~~G~~V~~~~r 36 (264)
T 3tfo_A 2 VMDKVILITGASG--GIGEGIARELGVAGAKILLGAR 36 (264)
T ss_dssp CTTCEEEESSTTS--HHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCEEEEeCCcc--HHHHHHHHHHHHCCCEEEEEEC
Confidence 4577888888755 4999999999999999988764
No 454
>3e5y_A TRMH family RNA methyltransferase; ssgcid, protein knot, decode, structural genomics; 2.40A {Burkholderia pseudomallei 305} SCOP: c.116.1.0
Probab=43.51 E-value=31 Score=22.58 Aligned_cols=28 Identities=14% Similarity=0.320 Sum_probs=23.2
Q ss_pred HHHHHHHHhhCCCEEEEECCCCCCCCHH
Q psy4411 55 VHSLARLLTLYDVKLNYVSPPNLGMPES 82 (99)
Q Consensus 55 ~~Sl~~~~~~~G~~v~~~~P~~~~~~~~ 82 (99)
.=+.+..|.-||.+.+++.|..+.+.+.
T Consensus 19 lGaI~Rta~a~G~~~viv~~~~~~~~~~ 46 (160)
T 3e5y_A 19 TGNVIRLCANTGARLHLIEPLGFPLDDA 46 (160)
T ss_dssp HHHHHHHHHHHTCEEEEESSCSSCCCHH
T ss_pred HHHHHHHHHHcCCcEEEECCCCCCCccH
Confidence 4588889999999999999988776644
No 455
>3n4j_A RNA methyltransferase; center for structural genomics of INF diseases, csgid; 1.47A {Yersinia pestis} SCOP: c.116.1.1 PDB: 3n4k_A* 1mxi_A* 1j85_A*
Probab=43.50 E-value=31 Score=22.71 Aligned_cols=29 Identities=14% Similarity=0.228 Sum_probs=23.5
Q ss_pred HHHHHHHHhhCCCEEEEECCCCCCCCHHH
Q psy4411 55 VHSLARLLTLYDVKLNYVSPPNLGMPESI 83 (99)
Q Consensus 55 ~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~ 83 (99)
.=+.+..|.-||++.+++.|..+.+.+..
T Consensus 18 lGaI~Rta~a~G~~~viv~~~~~~~~~~~ 46 (165)
T 3n4j_A 18 TGNIIRLCANTGCQLHLIKPLGFTWDDKR 46 (165)
T ss_dssp HHHHHHHHHHHTCEEEEESCCSSCCCHHH
T ss_pred HHHHHHHHHHcCCeEEEECCCCCCCccHH
Confidence 44888899999999999999877766443
No 456
>3kty_A Probable methyltransferase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 2.30A {Bordetella pertussis}
Probab=43.31 E-value=32 Score=22.64 Aligned_cols=47 Identities=17% Similarity=0.127 Sum_probs=32.4
Q ss_pred CCCcEEEEECCCCCchhHHHHHHHHhhCCC-EEEEECCCCCC--CCHHHHH
Q psy4411 38 VNGLTITMVGDLKNGRTVHSLARLLTLYDV-KLNYVSPPNLG--MPESIQE 85 (99)
Q Consensus 38 l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~-~v~~~~P~~~~--~~~~~~~ 85 (99)
+.++.++..+--.- .=.-+.+..|.-||. .+.++.|.... +.+..+.
T Consensus 8 ~~~~~vvL~~~~dp-~N~Gai~Rta~a~G~~~l~lv~~~~~d~~~~~~~~r 57 (173)
T 3kty_A 8 FSRVRFIMTQPSHP-GNVGSAARAIKTMGFGELVLVAPRFPDMTAQPEAVA 57 (173)
T ss_dssp HTTEEEEEESCCCH-HHHHHHHHHHHHTTCCCEEEESCSSTTGGGSHHHHH
T ss_pred hCCeEEEEeCCCCC-CcHHHHHHHHHHcCCCEEEEeCCCccccCCCHHHHH
Confidence 45567777773221 134588899999997 88889998775 4666654
No 457
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=43.19 E-value=36 Score=23.46 Aligned_cols=36 Identities=8% Similarity=0.079 Sum_probs=31.2
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
+++|+++.+.|-..- +.+.++..++.-|.+|+++.-
T Consensus 8 ~l~~k~vlVTGas~g--IG~aia~~l~~~G~~V~~~~r 43 (271)
T 3tzq_B 8 ELENKVAIITGACGG--IGLETSRVLARAGARVVLADL 43 (271)
T ss_dssp TTTTCEEEEETTTSH--HHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCEEEEECCCcH--HHHHHHHHHHHCCCEEEEEcC
Confidence 588999999997654 999999999999999988864
No 458
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=43.12 E-value=77 Score=21.64 Aligned_cols=38 Identities=16% Similarity=0.079 Sum_probs=31.1
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
.++|+++.+.|-..++.+.+.++..+++.|.+|++++-
T Consensus 3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r 40 (275)
T 2pd4_A 3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYL 40 (275)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEES
T ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeC
Confidence 47788999999862234999999999999999988864
No 459
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=43.06 E-value=30 Score=23.10 Aligned_cols=37 Identities=14% Similarity=0.134 Sum_probs=31.2
Q ss_pred cCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 36 GRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 36 g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
..++|+++.+.|-.. .+.+.++..++.-|.+|.++.-
T Consensus 10 ~~l~~k~vlITGas~--gIG~~ia~~l~~~G~~V~~~~r 46 (247)
T 3i1j_A 10 ELLKGRVILVTGAAR--GIGAAAARAYAAHGASVVLLGR 46 (247)
T ss_dssp TTTTTCEEEESSTTS--HHHHHHHHHHHHTTCEEEEEES
T ss_pred ccCCCCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEec
Confidence 358899999999755 4999999999999999988764
No 460
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=42.96 E-value=40 Score=23.35 Aligned_cols=35 Identities=14% Similarity=0.020 Sum_probs=27.6
Q ss_pred CCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 38 VNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 38 l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
++++++.+.|-.. -+.+.++..++.-|.+|+++.-
T Consensus 22 ~~~k~~lVTGas~--GIG~aia~~la~~G~~V~~~~r 56 (279)
T 3sju_A 22 SRPQTAFVTGVSS--GIGLAVARTLAARGIAVYGCAR 56 (279)
T ss_dssp ---CEEEEESTTS--HHHHHHHHHHHHTTCEEEEEES
T ss_pred cCCCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeC
Confidence 6788899999755 4999999999999999988764
No 461
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=42.92 E-value=60 Score=23.40 Aligned_cols=49 Identities=14% Similarity=0.168 Sum_probs=35.2
Q ss_pred CcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCe
Q psy4411 40 GLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQ 93 (99)
Q Consensus 40 g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~ 93 (99)
|.+|++.|- |.+....+.++..+|.+++.+....- +++-.+.+++.|++
T Consensus 181 g~~VlV~Ga---G~vG~~~~q~a~~~Ga~Vi~~~~~~~--~~~~~~~~~~~ga~ 229 (366)
T 2cdc_A 181 CRKVLVVGT---GPIGVLFTLLFRTYGLEVWMANRREP--TEVEQTVIEETKTN 229 (366)
T ss_dssp TCEEEEESC---HHHHHHHHHHHHHHTCEEEEEESSCC--CHHHHHHHHHHTCE
T ss_pred CCEEEEECC---CHHHHHHHHHHHhCCCEEEEEeCCcc--chHHHHHHHHhCCc
Confidence 899999996 35999999999999998887765320 12333556666654
No 462
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=42.89 E-value=42 Score=24.54 Aligned_cols=36 Identities=8% Similarity=0.202 Sum_probs=30.9
Q ss_pred cCCCCcEEEEECCCCCchhHHHHHHHHhhCCC-EEEEECC
Q psy4411 36 GRVNGLTITMVGDLKNGRTVHSLARLLTLYDV-KLNYVSP 74 (99)
Q Consensus 36 g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~-~v~~~~P 74 (99)
.+++++++.++|-+ .++++.+..++..|. +++++.-
T Consensus 144 ~~l~gk~~lVlGAG---Gaaraia~~L~~~G~~~v~v~nR 180 (312)
T 3t4e_A 144 FDMRGKTMVLLGAG---GAATAIGAQAAIEGIKEIKLFNR 180 (312)
T ss_dssp CCCTTCEEEEECCS---HHHHHHHHHHHHTTCSEEEEEEC
T ss_pred CCcCCCEEEEECcC---HHHHHHHHHHHHcCCCEEEEEEC
Confidence 36889999999974 499999999999998 8888865
No 463
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=42.88 E-value=37 Score=23.05 Aligned_cols=36 Identities=14% Similarity=0.163 Sum_probs=30.2
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
+++++++.+.|-.. .+.+.++..++.-|.+|+++.-
T Consensus 2 ~l~~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r 37 (254)
T 1hdc_A 2 DLSGKTVIITGGAR--GLGAEAARQAVAAGARVVLADV 37 (254)
T ss_dssp CCCCSEEEEETTTS--HHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeC
Confidence 46788999999755 4999999999999999988753
No 464
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=42.88 E-value=36 Score=23.46 Aligned_cols=36 Identities=14% Similarity=0.025 Sum_probs=30.8
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
+++|+++.+.|-..- +.+.++..++.-|.+|+++.-
T Consensus 8 ~l~~k~vlVTGas~g--IG~aia~~l~~~G~~V~~~~r 43 (281)
T 3svt_A 8 SFQDRTYLVTGGGSG--IGKGVAAGLVAAGASVMIVGR 43 (281)
T ss_dssp CCTTCEEEEETTTSH--HHHHHHHHHHHTTCEEEEEES
T ss_pred CcCCCEEEEeCCCcH--HHHHHHHHHHHCCCEEEEEeC
Confidence 578899999997654 999999999999999988763
No 465
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=42.83 E-value=32 Score=22.85 Aligned_cols=31 Identities=13% Similarity=0.054 Sum_probs=24.1
Q ss_pred CcEEEEECCCCCchhHHHHHHHHhhCCCEEEEE
Q psy4411 40 GLTITMVGDLKNGRTVHSLARLLTLYDVKLNYV 72 (99)
Q Consensus 40 g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~ 72 (99)
|+++.+.|-.. .+.+.++..++..|.++++.
T Consensus 1 ~k~vlVTGasg--giG~~la~~l~~~G~~v~~~ 31 (244)
T 1edo_A 1 SPVVVVTGASR--GIGKAIALSLGKAGCKVLVN 31 (244)
T ss_dssp CCEEEETTCSS--HHHHHHHHHHHHTTCEEEEE
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEE
Confidence 45677777654 48899999999999988874
No 466
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=42.79 E-value=37 Score=23.27 Aligned_cols=36 Identities=8% Similarity=0.074 Sum_probs=30.9
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
+++|+++.+.|-.. -+.+.++..++.-|.+|+++.-
T Consensus 5 ~l~~k~~lVTGas~--GIG~aia~~l~~~G~~V~~~~r 40 (265)
T 3lf2_A 5 DLSEAVAVVTGGSS--GIGLATVELLLEAGAAVAFCAR 40 (265)
T ss_dssp CCTTCEEEEETCSS--HHHHHHHHHHHHTTCEEEEEES
T ss_pred CcCCCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeC
Confidence 57889999999765 4999999999999999988764
No 467
>4h31_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PE5; 1.70A {Vibrio vulnificus} PDB: 3upd_A*
Probab=42.66 E-value=56 Score=24.48 Aligned_cols=45 Identities=13% Similarity=0.201 Sum_probs=36.1
Q ss_pred cCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCC
Q psy4411 36 GRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMP 80 (99)
Q Consensus 36 g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~ 80 (99)
..|+|++++.+=.-+.-|+=-||-.++.++|.++....|..-.+.
T Consensus 66 ~~L~GK~la~lF~epSTRTR~SFE~A~~~LGg~vi~l~~~~ss~~ 110 (358)
T 4h31_A 66 KKLLGKNIALIFEKASTRTRCAFEVAAFDQGAQVTYIGPSGSQIG 110 (358)
T ss_dssp CTTTTCEEEEEESSCCSHHHHHHHHHHHHTTCEEEEECSSSSCBT
T ss_pred ccCCCCEEEEEeCCCChhhHHHHHHHHHHcCCeEEECCccccccc
Confidence 358999998775434448999999999999999999999766543
No 468
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=42.64 E-value=38 Score=22.76 Aligned_cols=36 Identities=17% Similarity=0.091 Sum_probs=30.7
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
+++++++.+.|-.. .+.+.++..++.-|.+|+++.-
T Consensus 9 ~~~~k~vlVTGasg--giG~~~a~~l~~~G~~V~~~~r 44 (265)
T 2o23_A 9 SVKGLVAVITGGAS--GLGLATAERLVGQGASAVLLDL 44 (265)
T ss_dssp CCTTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeC
Confidence 57889999999865 4999999999999999988764
No 469
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=42.63 E-value=28 Score=23.40 Aligned_cols=37 Identities=22% Similarity=0.196 Sum_probs=31.8
Q ss_pred cCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 36 GRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 36 g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
..++++++.+.|-..- +.+.++..++..|.+|.++.-
T Consensus 10 ~~~~~k~vlVTGas~g--IG~~~a~~l~~~G~~V~~~~r 46 (249)
T 3f9i_A 10 IDLTGKTSLITGASSG--IGSAIARLLHKLGSKVIISGS 46 (249)
T ss_dssp CCCTTCEEEETTTTSH--HHHHHHHHHHHTTCEEEEEES
T ss_pred ccCCCCEEEEECCCCh--HHHHHHHHHHHCCCEEEEEcC
Confidence 4688999999998654 999999999999999988764
No 470
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=42.61 E-value=20 Score=24.39 Aligned_cols=34 Identities=6% Similarity=-0.137 Sum_probs=27.1
Q ss_pred CCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEEC
Q psy4411 38 VNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVS 73 (99)
Q Consensus 38 l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~ 73 (99)
+.++++.+.|-.. -+.+.++..++..|.+|+++.
T Consensus 5 ~~~k~vlVTGas~--gIG~~~a~~l~~~G~~v~~~~ 38 (264)
T 3i4f_A 5 RFVRHALITAGTK--GLGKQVTEKLLAKGYSVTVTY 38 (264)
T ss_dssp -CCCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEE
T ss_pred cccCEEEEeCCCc--hhHHHHHHHHHHCCCEEEEEc
Confidence 4567888888755 499999999999999998874
No 471
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=42.61 E-value=44 Score=24.49 Aligned_cols=40 Identities=18% Similarity=0.039 Sum_probs=33.3
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPN 76 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~ 76 (99)
.++|++++.+=.-+.-|+--||-.++.++|.++....|..
T Consensus 35 ~L~gk~~~~lF~e~STRTR~SFe~A~~~LGg~~i~l~~~~ 74 (299)
T 1pg5_A 35 ILSGKTISIAFFEPSTRTYLSFQKAIINLGGDVIGFSGEE 74 (299)
T ss_dssp TTTTCEEEEEESSCCHHHHHHHHHHHHHTTCEEEEEECC-
T ss_pred ccCCCEEEEEecCCCcchHHhHHHHHHHhCCEEEEeCCCC
Confidence 4899999887655555899999999999999999998765
No 472
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=42.46 E-value=37 Score=23.43 Aligned_cols=36 Identities=14% Similarity=0.123 Sum_probs=30.9
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
+++|+++.+.|-... +.+.++..++..|.+|+++.-
T Consensus 23 ~l~~k~vlITGasgg--iG~~la~~L~~~G~~V~~~~r 58 (302)
T 1w6u_A 23 SFQGKVAFITGGGTG--LGKGMTTLLSSLGAQCVIASR 58 (302)
T ss_dssp TTTTCEEEEETTTSH--HHHHHHHHHHHTTCEEEEEES
T ss_pred cCCCCEEEEECCCch--HHHHHHHHHHHCCCEEEEEeC
Confidence 478899999997654 999999999999999988764
No 473
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=42.45 E-value=40 Score=22.62 Aligned_cols=36 Identities=8% Similarity=-0.012 Sum_probs=30.4
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
+++++++.+.|-... +.+.++..++..|.+|+++.-
T Consensus 4 ~~~~k~vlITGasgg--iG~~la~~l~~~G~~V~~~~r 39 (264)
T 2pd6_A 4 RLRSALALVTGAGSG--IGRAVSVRLAGEGATVAACDL 39 (264)
T ss_dssp CCTTCEEEEETTTSH--HHHHHHHHHHHTTCEEEEEES
T ss_pred ccCCCEEEEECCCCh--HHHHHHHHHHHCCCEEEEEeC
Confidence 477889999998654 999999999999999988753
No 474
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=42.39 E-value=89 Score=22.12 Aligned_cols=49 Identities=10% Similarity=0.068 Sum_probs=35.1
Q ss_pred CCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCCCHHHHHHHHhcCCeE
Q psy4411 38 VNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGMPESIQEFVASKGKQQ 94 (99)
Q Consensus 38 l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~ 94 (99)
-.|.+|++.|-+ .+....++++..+|.+++.+.+ .++-.+.+++.|.+.
T Consensus 165 ~~g~~VlV~GaG---~vG~~a~qla~~~Ga~Vi~~~~-----~~~~~~~~~~lGa~~ 213 (340)
T 3s2e_A 165 RPGQWVVISGIG---GLGHVAVQYARAMGLRVAAVDI-----DDAKLNLARRLGAEV 213 (340)
T ss_dssp CTTSEEEEECCS---TTHHHHHHHHHHTTCEEEEEES-----CHHHHHHHHHTTCSE
T ss_pred CCCCEEEEECCC---HHHHHHHHHHHHCCCeEEEEeC-----CHHHHHHHHHcCCCE
Confidence 467889999853 3999999999999998877754 233445566666543
No 475
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=42.36 E-value=30 Score=24.77 Aligned_cols=29 Identities=17% Similarity=0.051 Sum_probs=23.9
Q ss_pred cEEEEECCCCCchhHHHHHHHHhhCCCEEEEE
Q psy4411 41 LTITMVGDLKNGRTVHSLARLLTLYDVKLNYV 72 (99)
Q Consensus 41 ~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~ 72 (99)
.||+|||=++ +...++.-+.+-|.+|++.
T Consensus 6 ~kIgfIGLG~---MG~~mA~~L~~~G~~V~v~ 34 (297)
T 4gbj_A 6 EKIAFLGLGN---LGTPIAEILLEAGYELVVW 34 (297)
T ss_dssp CEEEEECCST---THHHHHHHHHHTTCEEEEC
T ss_pred CcEEEEecHH---HHHHHHHHHHHCCCeEEEE
Confidence 4899999865 8888888888889988763
No 476
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=42.34 E-value=32 Score=23.22 Aligned_cols=36 Identities=14% Similarity=0.103 Sum_probs=30.3
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
+++|+++.+.|-.. .+.+.++..++.-|.+|+++.-
T Consensus 3 ~l~~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r 38 (246)
T 2ag5_A 3 RLDGKVIILTAAAQ--GIGQAAALAFAREGAKVIATDI 38 (246)
T ss_dssp TTTTCEEEESSTTS--HHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEEC
Confidence 57888999999765 4999999999999999988753
No 477
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=42.24 E-value=37 Score=23.03 Aligned_cols=37 Identities=14% Similarity=0.094 Sum_probs=31.0
Q ss_pred cCCCCcEEEEECCC-CCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 36 GRVNGLTITMVGDL-KNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 36 g~l~g~~i~~vGd~-~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
+.++|+++.+.|-. .- +...++..++.-|.+|++++-
T Consensus 18 ~~l~~k~vlITGasg~G--IG~~~a~~l~~~G~~V~~~~r 55 (266)
T 3o38_A 18 GLLKGKVVLVTAAAGTG--IGSTTARRALLEGADVVISDY 55 (266)
T ss_dssp STTTTCEEEESSCSSSS--HHHHHHHHHHHTTCEEEEEES
T ss_pred cCCCCCEEEEECCCCCc--hHHHHHHHHHHCCCEEEEecC
Confidence 45889999999974 33 999999999999999988763
No 478
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=42.16 E-value=33 Score=23.58 Aligned_cols=36 Identities=11% Similarity=0.050 Sum_probs=30.6
Q ss_pred cCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEEC
Q psy4411 36 GRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVS 73 (99)
Q Consensus 36 g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~ 73 (99)
.+++++++.+.|-.. .+.+.++..++.-|.+|+++.
T Consensus 4 ~~l~~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~ 39 (264)
T 2dtx_A 4 SDLRDKVVIVTGASM--GIGRAIAERFVDEGSKVIDLS 39 (264)
T ss_dssp GGGTTCEEEEESCSS--HHHHHHHHHHHHTTCEEEEEE
T ss_pred cccCCCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEe
Confidence 457889999999765 499999999999999988875
No 479
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=42.14 E-value=21 Score=24.50 Aligned_cols=34 Identities=18% Similarity=0.243 Sum_probs=26.3
Q ss_pred CCCcEEEEECCCCCchhHHHHHHHHhhCCCE-EEEECC
Q psy4411 38 VNGLTITMVGDLKNGRTVHSLARLLTLYDVK-LNYVSP 74 (99)
Q Consensus 38 l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~-v~~~~P 74 (99)
+.+.+|+++|-+ ++..+++..++..|.+ +.++.+
T Consensus 8 ~~~m~i~iiG~G---~mG~~~a~~l~~~g~~~v~~~~~ 42 (266)
T 3d1l_A 8 IEDTPIVLIGAG---NLATNLAKALYRKGFRIVQVYSR 42 (266)
T ss_dssp GGGCCEEEECCS---HHHHHHHHHHHHHTCCEEEEECS
T ss_pred CCCCeEEEEcCC---HHHHHHHHHHHHCCCeEEEEEeC
Confidence 456789999974 3999999999888988 566544
No 480
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=42.13 E-value=50 Score=24.91 Aligned_cols=43 Identities=14% Similarity=0.206 Sum_probs=35.0
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGM 79 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~ 79 (99)
.++|++++.+=.-+.-|+=-||-.++.++|.++....|....+
T Consensus 38 ~L~gK~la~lF~epSTRTR~SFE~A~~~LGg~vi~l~~~~ssl 80 (355)
T 4a8p_A 38 LLKNKSLGMIFQQSSTRTRVSFETAMEQLGGHGEYLAPGQIQL 80 (355)
T ss_dssp TTTTCEEEEEESSCCSHHHHHHHHHHHHTTCEEEEECBTTBCB
T ss_pred ccCCCEEEEEecCCChhhHhhHHHHHHHcCCeEEEeCcccccC
Confidence 4899999877544444788999999999999999999876544
No 481
>1sjq_A Polypyrimidine tract-binding protein 1; babbab motif, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=42.09 E-value=45 Score=20.47 Aligned_cols=45 Identities=13% Similarity=0.032 Sum_probs=33.1
Q ss_pred HhcCCCCcEEEEECCCCCchhHHHHHHHHhhCC--CEEEEECCCCCC
Q psy4411 34 EMGRVNGLTITMVGDLKNGRTVHSLARLLTLYD--VKLNYVSPPNLG 78 (99)
Q Consensus 34 ~~g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G--~~v~~~~P~~~~ 78 (99)
+.|+-..-+..|||.+...-.-..|..+++.|| .++.+...+||.
T Consensus 9 ~~~~~~~~~~LfV~nLp~~vte~dL~~lF~~fG~V~~v~i~~~kGfa 55 (105)
T 1sjq_A 9 HHGSGVPSRVIHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQA 55 (105)
T ss_dssp ---CCCCCCEEEECSCCTTSCHHHHHHHHHHHCCEEEEEEETTTTEE
T ss_pred ccCCCCCCCEEEEeCCCCCCCHHHHHHHHHhcCCEEEEEEEcCCCEE
Confidence 346666678899999887555678999999999 478877777764
No 482
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=42.05 E-value=40 Score=22.86 Aligned_cols=36 Identities=8% Similarity=0.111 Sum_probs=30.4
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
+++|+++.+.|-... +.+.++..++.-|.+|+++.-
T Consensus 3 ~l~~k~vlVTGas~g--IG~~ia~~l~~~G~~V~~~~r 38 (256)
T 2d1y_A 3 LFAGKGVLVTGGARG--IGRAIAQAFAREGALVALCDL 38 (256)
T ss_dssp TTTTCEEEEETTTSH--HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCEEEEeCCCCH--HHHHHHHHHHHCCCEEEEEeC
Confidence 477889999997654 999999999999999888753
No 483
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=41.90 E-value=76 Score=21.23 Aligned_cols=36 Identities=14% Similarity=0.137 Sum_probs=29.2
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCE-EEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVK-LNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~-v~~~~P 74 (99)
+++|+++.+.|-.. -+.+.++..++..|.+ |+++.-
T Consensus 2 ~l~~k~vlVtGas~--gIG~~~a~~l~~~G~~~v~~~~r 38 (254)
T 1sby_A 2 DLTNKNVIFVAALG--GIGLDTSRELVKRNLKNFVILDR 38 (254)
T ss_dssp CCTTCEEEEETTTS--HHHHHHHHHHHHTCCSEEEEEES
T ss_pred CCCCcEEEEECCCC--hHHHHHHHHHHHCCCcEEEEEec
Confidence 36788999999754 5999999999999996 777653
No 484
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=41.74 E-value=45 Score=22.57 Aligned_cols=36 Identities=17% Similarity=0.218 Sum_probs=30.6
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
.++++++.+.|-.. .+.+.++..++.-|.+|+++.-
T Consensus 13 ~l~~k~vlITGasg--giG~~~a~~l~~~G~~V~~~~r 48 (278)
T 2bgk_A 13 RLQDKVAIITGGAG--GIGETTAKLFVRYGAKVVIADI 48 (278)
T ss_dssp TTTTCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEES
T ss_pred cccCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEcC
Confidence 47889999999755 4999999999999999988753
No 485
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=41.51 E-value=41 Score=22.97 Aligned_cols=36 Identities=17% Similarity=0.182 Sum_probs=30.2
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
+++|+++.+.|-... +.+.++..++.-|.+|+++.-
T Consensus 4 ~l~~k~vlVTGas~g--IG~~ia~~l~~~G~~V~~~~r 39 (260)
T 1nff_A 4 RLTGKVALVSGGARG--MGASHVRAMVAEGAKVVFGDI 39 (260)
T ss_dssp TTTTCEEEEETTTSH--HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCEEEEeCCCCH--HHHHHHHHHHHCCCEEEEEeC
Confidence 478899999997654 999999999999999888653
No 486
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=41.41 E-value=48 Score=24.88 Aligned_cols=43 Identities=12% Similarity=0.085 Sum_probs=34.6
Q ss_pred cCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCC
Q psy4411 36 GRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLG 78 (99)
Q Consensus 36 g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~ 78 (99)
..++|++++.+=.-+.-|+--||-.++.++|.++....|..-+
T Consensus 66 ~~L~gK~la~lF~epSTRTR~SFE~A~~~LGg~vi~l~~~~ss 108 (340)
T 4ep1_A 66 PLLQGKILGLIFDKHSTRTRVSFEAGMVQLGGHGMFLNGKEMQ 108 (340)
T ss_dssp CTTTTCEEEEEESSCCHHHHHHHHHHHHHTTCEEEEEESCC--
T ss_pred cccCCceEEEEecCCCccHHHHHHHHHHHcCCeEEEcCccccc
Confidence 3489999998865555588899999999999999999986543
No 487
>3mxt_A Pantothenate synthetase; alpha-beta-alpha, structural genomics, center for structural of infectious diseases, csgid, ligase; HET: MSE; 1.85A {Campylobacter jejuni subsp} SCOP: c.26.1.0 PDB: 3uy4_A*
Probab=41.16 E-value=33 Score=25.29 Aligned_cols=54 Identities=22% Similarity=0.210 Sum_probs=35.2
Q ss_pred CCCcEEEEECC--CCCchhHH-HHHHHHhhCCCEEEEEC----CCCCCCCHH----------HHHHHHhcCCeEE
Q psy4411 38 VNGLTITMVGD--LKNGRTVH-SLARLLTLYDVKLNYVS----PPNLGMPES----------IQEFVASKGKQQE 95 (99)
Q Consensus 38 l~g~~i~~vGd--~~n~rv~~-Sl~~~~~~~G~~v~~~~----P~~~~~~~~----------~~~~a~~~g~~~~ 95 (99)
-+|++|++|.- .-| -.| ||+..+.+ .++++++ |-.|.+.++ -.+.+++.|+++-
T Consensus 22 ~~g~~Ig~VPTMGaLH--~GHlsLv~~Ar~--~d~VVVSIFVNP~QF~~~EDl~~YPRtle~D~~ll~~~gvD~v 92 (285)
T 3mxt_A 22 SHQLSIGYVPTMGFLH--DGHLSLVKHAKT--QDKVIVSIFVNPMQFGPNEDFSSYPRDLERDIKMCQDNGVDMV 92 (285)
T ss_dssp HTTCCEEEEEECSSCC--HHHHHHHHHHTT--SSEEEEEECCCGGGCCTTSCTTTSCCCHHHHHHHHHHTTCSEE
T ss_pred HcCCeEEEEcCCCccc--HHHHHHHHHHHh--CCEEEEEeccCccccCCchhhhcCCCCHHHHHHHHHHCCCCEE
Confidence 36889999952 244 555 99998888 5666655 555555433 3456778888763
No 488
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=41.07 E-value=41 Score=22.94 Aligned_cols=36 Identities=19% Similarity=0.132 Sum_probs=30.5
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
+++|+++.+.|-.. .+.+.++..++.-|.+|+++.-
T Consensus 10 ~l~~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r 45 (267)
T 1iy8_A 10 RFTDRVVLITGGGS--GLGRATAVRLAAEGAKLSLVDV 45 (267)
T ss_dssp CCTTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEES
T ss_pred cCCCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEeC
Confidence 47889999999765 4999999999999999988753
No 489
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=41.01 E-value=41 Score=22.89 Aligned_cols=36 Identities=11% Similarity=0.159 Sum_probs=30.6
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
.++|+++.+.|-.. -+.+.++..++.-|.+|+++.-
T Consensus 5 ~l~~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r 40 (259)
T 4e6p_A 5 RLEGKSALITGSAR--GIGRAFAEAYVREGATVAIADI 40 (259)
T ss_dssp TTTTCEEEEETCSS--HHHHHHHHHHHHTTCEEEEEES
T ss_pred cCCCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeC
Confidence 57889999999765 4999999999999999988763
No 490
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=41.00 E-value=44 Score=21.00 Aligned_cols=37 Identities=14% Similarity=-0.007 Sum_probs=28.7
Q ss_pred CcEEEEECCCCC-chhHHHHHHHHhhCCCEEEEECCCC
Q psy4411 40 GLTITMVGDLKN-GRTVHSLARLLTLYDVKLNYVSPPN 76 (99)
Q Consensus 40 g~~i~~vGd~~n-~rv~~Sl~~~~~~~G~~v~~~~P~~ 76 (99)
-++||.||-..+ ++..+..+.-+...|.++.-+.|+.
T Consensus 4 p~siAVVGaS~~~~~~g~~v~~~L~~~g~~V~pVnP~~ 41 (122)
T 3ff4_A 4 MKKTLILGATPETNRYAYLAAERLKSHGHEFIPVGRKK 41 (122)
T ss_dssp CCCEEEETCCSCTTSHHHHHHHHHHHHTCCEEEESSSC
T ss_pred CCEEEEEccCCCCCCHHHHHHHHHHHCCCeEEEECCCC
Confidence 368999996432 4678888888888898999999963
No 491
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=47.05 E-value=5.7 Score=26.98 Aligned_cols=36 Identities=11% Similarity=0.005 Sum_probs=27.9
Q ss_pred cCCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 36 GRVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 36 g~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
+...+.+|+++|-++ +...++..+.+.|.++++..+
T Consensus 15 ~~~~~~~I~iIG~G~---mG~~la~~L~~~G~~V~~~~r 50 (201)
T 2yjz_A 15 SSEKQGVVCIFGTGD---FGKSLGLKMLQCGYSVVFGSR 50 (201)
Confidence 346677899999654 888888888888888877765
No 492
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=40.86 E-value=40 Score=24.79 Aligned_cols=43 Identities=14% Similarity=0.227 Sum_probs=35.3
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCCCCCC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPPNLGM 79 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~~~~~ 79 (99)
.++|++++.+=.-+.-|+--||-.++.++|.++....|..-.+
T Consensus 42 ~L~gk~~~~lF~e~STRTR~SFe~A~~~LGg~~i~l~~~~ss~ 84 (301)
T 2ef0_A 42 DLKGKVLALLFEKPSLRTRTTLEVAMVHLGGHAVYLDQKQVGI 84 (301)
T ss_dssp TTTTCEEEEEESSCCHHHHHHHHHHHHHTTCEEEEEEGGGSCT
T ss_pred CCCCCEEEEEeccCCcchHHHHHHHHHHcCCeEEEECCccccc
Confidence 3899999877654555899999999999999999999865443
No 493
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=40.84 E-value=38 Score=24.27 Aligned_cols=35 Identities=17% Similarity=-0.008 Sum_probs=28.9
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEEC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVS 73 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~ 73 (99)
.++++++.+.|-.. .+.+.++..++.-|.+|++++
T Consensus 43 ~l~~k~~lVTGas~--GIG~aia~~La~~G~~Vv~~~ 77 (328)
T 2qhx_A 43 APTVPVALVTGAAK--RLGRSIAEGLHAEGYAVCLHY 77 (328)
T ss_dssp --CCCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEE
T ss_pred ccCCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEc
Confidence 47888888888755 499999999999999999886
No 494
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=40.84 E-value=40 Score=23.38 Aligned_cols=36 Identities=8% Similarity=0.147 Sum_probs=30.6
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
+++|+++.+.|-.. -+.+.++..++.-|.+|+++.-
T Consensus 2 ~l~gk~~lVTGas~--GIG~aia~~la~~G~~V~~~~r 37 (281)
T 3zv4_A 2 KLTGEVALITGGAS--GLGRALVDRFVAEGARVAVLDK 37 (281)
T ss_dssp TTTTCEEEEETCSS--HHHHHHHHHHHHTTCEEEEEES
T ss_pred CcCCCEEEEECCCc--HHHHHHHHHHHHCcCEEEEEeC
Confidence 36788999999765 4999999999999999998864
No 495
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=40.77 E-value=42 Score=22.77 Aligned_cols=36 Identities=11% Similarity=0.132 Sum_probs=30.0
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
+++|+++.+.|-... +.+.++..++.-|.+|+++.-
T Consensus 4 ~l~~k~vlVTGas~g--IG~~ia~~l~~~G~~V~~~~r 39 (263)
T 3ai3_A 4 GISGKVAVITGSSSG--IGLAIAEGFAKEGAHIVLVAR 39 (263)
T ss_dssp CCTTCEEEEESCSSH--HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCEEEEECCCch--HHHHHHHHHHHCCCEEEEEcC
Confidence 367889999997654 999999999999999988753
No 496
>3sgv_B Undecaprenyl pyrophosphate synthase; alpha/beta, transferase; HET: 2BJ; 1.61A {Escherichia coli} PDB: 1jp3_A* 1v7u_A* 1x06_A* 1x07_A* 2e98_A* 2e99_A* 2e9a_A* 2e9c_A* 2e9d_A* 1ueh_A 3sgt_B* 3qas_B* 3sgx_A* 3sh0_B* 3th8_A* 4h2j_A* 4h2m_A* 4h2o_B* 4h38_A* 4h3a_A* ...
Probab=40.76 E-value=33 Score=24.82 Aligned_cols=56 Identities=13% Similarity=0.154 Sum_probs=31.5
Q ss_pred cEEEEECCCCCchh------------------HHHHHHHHhhCCC---EEEEECCCCCCCC-HHH--------------H
Q psy4411 41 LTITMVGDLKNGRT------------------VHSLARLLTLYDV---KLNYVSPPNLGMP-ESI--------------Q 84 (99)
Q Consensus 41 ~~i~~vGd~~n~rv------------------~~Sl~~~~~~~G~---~v~~~~P~~~~~~-~~~--------------~ 84 (99)
.+||+|=|+|. |= +...+..|..+|+ .+..++.++|.=| +++ .
T Consensus 19 ~HVAiIMDGNr-RwAk~rgl~r~~GH~~G~~~l~~i~~~c~~lGI~~lTlYaFStENwkRp~~EV~~Lm~L~~~~l~~~~ 97 (253)
T 3sgv_B 19 RHVAIIMDGNG-RWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSSENWNRPAQEVSALMELFVWALDSEV 97 (253)
T ss_dssp SEEEEEECCHH-HHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECC-----------CHHHHHHHHTTHHHHH
T ss_pred CEEEEEecCcH-HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEEEchhccCCCHHHHHHHHHHHHHHHHHHH
Confidence 68999988764 54 3578899999995 4455567777633 332 1
Q ss_pred HHHHhcCCeEEEE
Q psy4411 85 EFVASKGKQQEVY 97 (99)
Q Consensus 85 ~~a~~~g~~~~~~ 97 (99)
+.+.++|+++.+.
T Consensus 98 ~~l~~~~vrvr~i 110 (253)
T 3sgv_B 98 KSLHRHNVRLRII 110 (253)
T ss_dssp HHHHHTTCEEEEE
T ss_pred HHHHHCCeEEEEE
Confidence 2345678887764
No 497
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=40.72 E-value=41 Score=24.30 Aligned_cols=32 Identities=9% Similarity=0.064 Sum_probs=25.6
Q ss_pred cEEEEECCCCCchhHHHHHHHHhhCCCEEEEECCC
Q psy4411 41 LTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSPP 75 (99)
Q Consensus 41 ~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P~ 75 (99)
+||+++|.+ ...+.++.++.++|.+++++.|.
T Consensus 2 ~~Ililg~g---~~g~~~~~a~~~~G~~v~~~~~~ 33 (380)
T 3ax6_A 2 KKIGIIGGG---QLGKMMTLEAKKMGFYVIVLDPT 33 (380)
T ss_dssp CEEEEECCS---HHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCC---HHHHHHHHHHHHCCCEEEEEeCC
Confidence 478888864 36788888888999998888874
No 498
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=40.69 E-value=42 Score=22.76 Aligned_cols=36 Identities=14% Similarity=0.130 Sum_probs=30.3
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
+++|+++.+.|-.. .+.+.++..++.-|.+|+++.-
T Consensus 6 ~l~~k~vlVTGas~--giG~~ia~~l~~~G~~V~~~~r 41 (260)
T 2ae2_A 6 NLEGCTALVTGGSR--GIGYGIVEELASLGASVYTCSR 41 (260)
T ss_dssp CCTTCEEEEESCSS--HHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeC
Confidence 47889999999755 4999999999999999988753
No 499
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=40.58 E-value=48 Score=22.55 Aligned_cols=38 Identities=11% Similarity=0.078 Sum_probs=30.7
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
.++++++.+.|-..++.+.+.++..++.-|.+|+++.-
T Consensus 5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r 42 (261)
T 2wyu_A 5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQ 42 (261)
T ss_dssp CCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEES
T ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcC
Confidence 47788999999762224999999999999999988764
No 500
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=40.57 E-value=39 Score=23.55 Aligned_cols=36 Identities=14% Similarity=0.046 Sum_probs=30.5
Q ss_pred CCCCcEEEEECCCCCchhHHHHHHHHhhCCCEEEEECC
Q psy4411 37 RVNGLTITMVGDLKNGRTVHSLARLLTLYDVKLNYVSP 74 (99)
Q Consensus 37 ~l~g~~i~~vGd~~n~rv~~Sl~~~~~~~G~~v~~~~P 74 (99)
+++|+++.+.|-..- +.+.++..++.-|.+|+++.-
T Consensus 26 ~l~gk~vlVTGas~g--IG~aia~~la~~G~~V~~~~r 61 (277)
T 3gvc_A 26 DLAGKVAIVTGAGAG--IGLAVARRLADEGCHVLCADI 61 (277)
T ss_dssp -CTTCEEEETTTTST--HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCEEEEECCCcH--HHHHHHHHHHHCCCEEEEEeC
Confidence 488899999997665 999999999999999988763
Done!