Query psy4412
Match_columns 39
No_of_seqs 111 out of 1995
Neff 12.7
Searched_HMMs 29240
Date Sat Aug 17 00:52:43 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4412.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4412hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2yrm_A B-cell lymphoma 6 prote 99.8 3.5E-19 1.2E-23 52.7 3.8 39 1-39 5-43 (43)
2 2em4_A Zinc finger protein 28 99.8 5.2E-19 1.8E-23 52.8 3.9 39 1-39 7-45 (46)
3 2emj_A Zinc finger protein 28 99.8 6.7E-19 2.3E-23 52.6 3.9 39 1-39 7-45 (46)
4 4gzn_C ZFP-57, zinc finger pro 99.8 2.9E-19 1E-23 56.2 3.1 37 3-39 1-37 (60)
5 2en9_A Zinc finger protein 28 99.8 6.4E-19 2.2E-23 52.6 3.7 39 1-39 7-45 (46)
6 2eow_A Zinc finger protein 347 99.8 7.7E-19 2.6E-23 52.4 3.8 39 1-39 7-45 (46)
7 2ely_A Zinc finger protein 224 99.8 1.1E-18 3.7E-23 52.1 4.1 39 1-39 7-45 (46)
8 2eom_A ZFP-95, zinc finger pro 99.8 6.9E-19 2.3E-23 52.6 3.7 39 1-39 7-45 (46)
9 2em3_A Zinc finger protein 28 99.8 9.6E-19 3.3E-23 52.2 3.8 39 1-39 7-45 (46)
10 2emx_A Zinc finger protein 268 99.8 8.8E-19 3E-23 51.9 3.7 39 1-39 5-43 (44)
11 2ytn_A Zinc finger protein 347 99.8 8.9E-19 3.1E-23 52.3 3.6 39 1-39 7-45 (46)
12 2em2_A Zinc finger protein 28 99.8 1.3E-18 4.3E-23 52.0 3.9 39 1-39 7-45 (46)
13 2yts_A Zinc finger protein 484 99.8 9.4E-19 3.2E-23 52.2 3.6 39 1-39 7-45 (46)
14 2ytf_A Zinc finger protein 268 99.8 7.5E-19 2.6E-23 52.4 3.4 39 1-39 7-45 (46)
15 2ytp_A Zinc finger protein 484 99.8 7.8E-19 2.7E-23 52.4 3.4 39 1-39 7-45 (46)
16 2emg_A Zinc finger protein 484 99.8 7.5E-19 2.6E-23 52.4 3.3 39 1-39 7-45 (46)
17 2emm_A ZFP-95, zinc finger pro 99.8 1.2E-18 4.1E-23 52.0 3.8 39 1-39 7-45 (46)
18 2enf_A Zinc finger protein 347 99.8 7.1E-19 2.4E-23 52.5 3.3 39 1-39 7-45 (46)
19 2ytj_A Zinc finger protein 484 99.8 1.1E-18 3.8E-23 52.1 3.7 39 1-39 7-45 (46)
20 2emf_A Zinc finger protein 484 99.8 9.8E-19 3.4E-23 52.2 3.5 39 1-39 7-45 (46)
21 2eor_A Zinc finger protein 224 99.8 7.8E-19 2.7E-23 52.4 3.3 39 1-39 7-45 (46)
22 2emy_A Zinc finger protein 268 99.8 1.3E-18 4.3E-23 51.9 3.8 39 1-39 7-45 (46)
23 2eon_A ZFP-95, zinc finger pro 99.8 5.9E-19 2E-23 52.7 3.0 39 1-39 7-45 (46)
24 2ep3_A Zinc finger protein 484 99.8 7.1E-19 2.4E-23 52.5 3.2 39 1-39 7-45 (46)
25 2eq2_A Zinc finger protein 347 99.8 8.7E-19 3E-23 52.3 3.4 39 1-39 7-45 (46)
26 2ytk_A Zinc finger protein 347 99.8 1.2E-18 4.2E-23 52.0 3.7 39 1-39 7-45 (46)
27 2epu_A Zinc finger protein 32; 99.8 7.3E-19 2.5E-23 52.3 3.2 39 1-39 7-45 (45)
28 2emh_A Zinc finger protein 484 99.8 9.7E-19 3.3E-23 52.2 3.4 39 1-39 7-45 (46)
29 2eoe_A Zinc finger protein 347 99.8 1.2E-18 4E-23 52.0 3.6 39 1-39 7-45 (46)
30 2em7_A Zinc finger protein 224 99.8 1.2E-18 4.1E-23 52.0 3.6 39 1-39 7-45 (46)
31 2enc_A Zinc finger protein 224 99.8 1.3E-18 4.6E-23 51.9 3.7 39 1-39 7-45 (46)
32 2el4_A Zinc finger protein 268 99.8 1E-18 3.4E-23 52.1 3.4 39 1-39 7-45 (46)
33 2el5_A Zinc finger protein 268 99.8 1.2E-18 4E-23 51.2 3.5 38 1-38 5-42 (42)
34 2elz_A Zinc finger protein 224 99.8 1.3E-18 4.4E-23 52.0 3.7 39 1-39 7-45 (46)
35 2emk_A Zinc finger protein 28 99.8 1.4E-18 4.7E-23 51.9 3.7 39 1-39 7-45 (46)
36 2yu8_A Zinc finger protein 347 99.8 1.2E-18 4.1E-23 52.0 3.6 39 1-39 7-45 (46)
37 2el6_A Zinc finger protein 268 99.8 1.4E-18 4.9E-23 51.9 3.7 39 1-39 7-45 (46)
38 2ytd_A Zinc finger protein 473 99.8 1.6E-18 5.5E-23 51.7 3.8 39 1-39 7-45 (46)
39 2eml_A Zinc finger protein 28 99.8 1.3E-18 4.5E-23 51.9 3.6 39 1-39 7-45 (46)
40 2ep1_A Zinc finger protein 484 99.8 1E-18 3.5E-23 52.1 3.4 39 1-39 7-45 (46)
41 2emi_A Zinc finger protein 484 99.8 1.4E-18 4.8E-23 51.8 3.7 39 1-39 7-45 (46)
42 2en6_A Zinc finger protein 268 99.8 1.4E-18 4.8E-23 51.8 3.7 39 1-39 7-45 (46)
43 2yti_A Zinc finger protein 347 99.8 6.7E-19 2.3E-23 52.6 2.9 39 1-39 7-45 (46)
44 2ema_A Zinc finger protein 347 99.8 1.3E-18 4.3E-23 51.9 3.5 39 1-39 7-45 (46)
45 2yth_A Zinc finger protein 224 99.8 1.5E-18 5.3E-23 51.8 3.7 39 1-39 7-45 (46)
46 2epw_A Zinc finger protein 268 99.8 1.8E-18 6.3E-23 51.5 3.9 39 1-39 7-45 (46)
47 2em6_A Zinc finger protein 224 99.8 9.7E-19 3.3E-23 52.2 3.2 39 1-39 7-45 (46)
48 2eq0_A Zinc finger protein 347 99.8 1E-18 3.6E-23 52.1 3.3 39 1-39 7-45 (46)
49 2emp_A Zinc finger protein 347 99.8 1.3E-18 4.3E-23 51.9 3.4 39 1-39 7-45 (46)
50 2eoo_A ZFP-95, zinc finger pro 99.8 1.2E-18 4E-23 52.0 3.4 39 1-39 7-45 (46)
51 2ept_A Zinc finger protein 32; 99.8 1.1E-18 3.9E-23 51.0 3.3 37 1-37 5-41 (41)
52 2ep2_A Zinc finger protein 484 99.8 1.4E-18 4.9E-23 51.8 3.5 39 1-39 7-45 (46)
53 2ene_A Zinc finger protein 347 99.8 1.3E-18 4.5E-23 51.9 3.4 39 1-39 7-45 (46)
54 2em0_A Zinc finger protein 224 99.8 1.4E-18 4.8E-23 51.8 3.5 39 1-39 7-45 (46)
55 2yrj_A Zinc finger protein 473 99.8 1.3E-18 4.4E-23 51.9 3.4 39 1-39 7-45 (46)
56 2eq4_A Zinc finger protein 224 99.8 1.3E-18 4.5E-23 51.9 3.4 39 1-39 7-45 (46)
57 2ytq_A Zinc finger protein 268 99.8 1.1E-18 3.7E-23 52.1 3.2 39 1-39 7-45 (46)
58 2yso_A ZFP-95, zinc finger pro 99.8 2.1E-18 7.1E-23 51.5 3.8 39 1-39 7-45 (46)
59 2eoq_A Zinc finger protein 224 99.8 1.7E-18 5.7E-23 51.7 3.5 39 1-39 7-45 (46)
60 2em9_A Zinc finger protein 224 99.8 2.1E-18 7.2E-23 51.4 3.7 39 1-39 7-45 (46)
61 2enh_A Zinc finger protein 28 99.8 2.2E-18 7.5E-23 51.4 3.7 39 1-39 7-45 (46)
62 2ytm_A Zinc finger protein 28 99.8 1.2E-18 4.1E-23 52.0 3.1 39 1-39 7-45 (46)
63 2eme_A Zinc finger protein 473 99.8 2.5E-18 8.5E-23 51.3 3.8 39 1-39 7-45 (46)
64 2eov_A Zinc finger protein 484 99.8 2.6E-18 9E-23 51.2 3.8 39 1-39 7-45 (46)
65 2epz_A Zinc finger protein 28 99.8 1.6E-18 5.3E-23 51.7 3.3 39 1-39 7-45 (46)
66 2em8_A Zinc finger protein 224 99.8 1.9E-18 6.5E-23 51.6 3.5 39 1-39 7-45 (46)
67 2en1_A Zinc finger protein 224 99.8 2.2E-18 7.6E-23 51.4 3.6 39 1-39 7-45 (46)
68 2yte_A Zinc finger protein 473 99.8 2.2E-18 7.7E-23 50.5 3.6 38 1-38 5-42 (42)
69 2eoz_A Zinc finger protein 473 99.8 2.2E-18 7.5E-23 51.4 3.6 39 1-39 7-45 (46)
70 2eq1_A Zinc finger protein 347 99.8 1.4E-18 4.8E-23 51.8 3.2 39 1-39 7-45 (46)
71 2eop_A Zinc finger protein 268 99.8 1.7E-18 5.7E-23 51.6 3.3 39 1-39 7-45 (46)
72 2eoy_A Zinc finger protein 473 99.8 2.1E-18 7.2E-23 51.5 3.5 39 1-39 7-46 (46)
73 2yu5_A Zinc finger protein 473 99.8 2.9E-18 1E-22 50.7 3.7 38 1-38 7-44 (44)
74 2eoh_A Zinc finger protein 28 99.8 1.9E-18 6.5E-23 51.6 3.3 38 1-38 7-44 (46)
75 2epc_A Zinc finger protein 32; 99.8 2.4E-18 8.1E-23 50.5 3.5 37 1-37 6-42 (42)
76 2em5_A ZFP-95, zinc finger pro 99.8 2.1E-18 7.2E-23 51.5 3.4 39 1-39 7-45 (46)
77 2en2_A B-cell lymphoma 6 prote 99.8 1.5E-18 5.2E-23 50.9 3.0 37 1-37 6-42 (42)
78 2en8_A Zinc finger protein 224 99.8 2.1E-18 7.1E-23 51.4 3.3 39 1-39 7-45 (46)
79 2eof_A Zinc finger protein 268 99.8 2.8E-18 9.6E-23 50.7 3.5 38 1-38 7-44 (44)
80 2ep0_A Zinc finger protein 28 99.7 2E-18 6.9E-23 51.5 3.2 39 1-39 7-45 (46)
81 2emb_A Zinc finger protein 473 99.7 3.3E-18 1.1E-22 50.6 3.6 38 1-38 7-44 (44)
82 2ytg_A ZFP-95, zinc finger pro 99.7 1.5E-18 5E-23 51.8 2.9 39 1-39 7-45 (46)
83 2ytr_A Zinc finger protein 347 99.7 1.7E-18 5.8E-23 51.6 3.0 39 1-39 7-45 (46)
84 2eou_A Zinc finger protein 473 99.7 2.7E-18 9.4E-23 50.8 3.4 38 1-38 7-44 (44)
85 2yto_A Zinc finger protein 484 99.7 2.6E-18 8.9E-23 51.3 3.4 38 1-38 7-44 (46)
86 2ysp_A Zinc finger protein 224 99.7 1.8E-18 6.1E-23 51.6 2.9 39 1-39 7-45 (46)
87 2epq_A POZ-, at HOOK-, and zin 99.7 3.9E-18 1.3E-22 50.7 3.5 39 1-39 5-43 (45)
88 2en7_A Zinc finger protein 268 99.7 2.2E-18 7.5E-23 51.0 2.9 38 1-38 7-44 (44)
89 2epx_A Zinc finger protein 28 99.7 3.2E-18 1.1E-22 51.2 3.3 39 1-39 7-46 (47)
90 2eos_A B-cell lymphoma 6 prote 99.7 2.5E-18 8.5E-23 50.5 2.9 37 1-37 6-42 (42)
91 2emz_A ZFP-95, zinc finger pro 99.7 1.7E-18 5.7E-23 51.7 2.5 39 1-39 7-45 (46)
92 2eoj_A Zinc finger protein 268 99.7 2.2E-18 7.7E-23 51.0 2.7 38 1-38 7-44 (44)
93 2ytt_A Zinc finger protein 473 99.7 1.4E-18 5E-23 51.8 2.2 39 1-39 7-45 (46)
94 2eox_A Zinc finger protein 473 99.7 3.8E-18 1.3E-22 50.5 2.8 38 1-38 7-44 (44)
95 2ytb_A Zinc finger protein 32; 99.7 2.3E-18 7.9E-23 50.5 2.3 37 1-37 6-42 (42)
96 2eq3_A Zinc finger protein 347 99.7 5.4E-18 1.8E-22 50.5 3.0 38 1-38 7-44 (46)
97 2en3_A ZFP-95, zinc finger pro 99.7 4.1E-18 1.4E-22 50.8 2.7 38 1-38 7-44 (46)
98 2epr_A POZ-, at HOOK-, and zin 99.7 1.2E-17 4.2E-22 50.2 3.4 39 1-39 7-45 (48)
99 2epv_A Zinc finger protein 268 99.7 2.5E-17 8.6E-22 48.7 3.7 38 1-38 7-44 (44)
100 1njq_A Superman protein; zinc- 99.7 2E-17 6.7E-22 47.9 3.3 38 1-38 1-38 (39)
101 2ent_A Krueppel-like factor 15 99.7 3.5E-17 1.2E-21 49.0 3.3 39 1-39 7-47 (48)
102 1x3c_A Zinc finger protein 292 99.7 1E-16 3.4E-21 51.6 3.3 37 2-38 23-62 (73)
103 2eps_A POZ-, at HOOK-, and zin 99.7 2.2E-16 7.5E-21 48.4 3.4 39 1-39 7-46 (54)
104 1x6e_A Zinc finger protein 24; 99.6 5E-16 1.7E-20 49.7 3.6 39 1-39 9-47 (72)
105 2lv2_A Insulinoma-associated p 99.6 6.1E-16 2.1E-20 51.2 3.5 38 2-39 24-61 (85)
106 1x5w_A Zinc finger protein 64, 99.6 8.3E-16 2.8E-20 48.9 3.7 39 1-39 4-42 (70)
107 2lt7_A Transcriptional regulat 99.6 2E-16 7E-21 55.6 2.1 37 2-38 18-54 (133)
108 2elx_A Zinc finger protein 406 99.6 1.4E-15 4.8E-20 42.9 3.4 34 1-34 2-35 (35)
109 2elo_A Zinc finger protein 406 99.6 1.2E-15 3.9E-20 43.6 3.1 34 1-34 4-37 (37)
110 1yui_A GAGA-factor; complex (D 99.6 6.1E-16 2.1E-20 47.4 2.7 36 1-36 19-54 (54)
111 2cot_A Zinc finger protein 435 99.6 1E-15 3.6E-20 49.4 3.3 35 3-37 43-77 (77)
112 1srk_A Zinc finger protein ZFP 99.6 1.7E-15 5.7E-20 42.8 3.2 34 1-34 2-35 (35)
113 2d9h_A Zinc finger protein 692 99.6 1E-15 3.4E-20 49.5 2.6 39 1-39 2-43 (78)
114 3uk3_C Zinc finger protein 217 99.6 1.2E-15 4E-20 46.9 2.6 37 3-39 1-37 (57)
115 1bhi_A CRE-BP1, ATF-2; CRE bin 99.6 2.2E-15 7.4E-20 43.2 3.0 36 1-36 1-38 (38)
116 2ghf_A ZHX1, zinc fingers and 99.6 5.7E-16 1.9E-20 52.7 1.7 36 3-38 47-83 (102)
117 4gzn_C ZFP-57, zinc finger pro 99.6 9E-16 3.1E-20 48.2 1.6 33 1-33 27-59 (60)
118 2lce_A B-cell lymphoma 6 prote 99.6 7.5E-15 2.6E-19 47.1 3.8 38 2-39 13-50 (74)
119 1rim_A E6APC2 peptide; E6-bind 99.6 4.1E-15 1.4E-19 41.7 2.8 33 5-37 1-33 (33)
120 2lt7_A Transcriptional regulat 99.6 1.1E-15 3.9E-20 53.7 1.6 38 1-38 45-82 (133)
121 2drp_A Protein (tramtrack DNA- 99.5 2.5E-15 8.4E-20 47.3 2.0 39 1-39 5-45 (66)
122 2dlk_A Novel protein; ZF-C2H2 99.5 5.5E-15 1.9E-19 47.8 2.7 39 1-39 33-73 (79)
123 2eln_A Zinc finger protein 406 99.5 1.7E-14 5.9E-19 41.9 3.2 32 1-32 4-37 (38)
124 1x6f_A Zinc finger protein 462 99.5 8.9E-16 3E-20 51.1 0.5 38 1-38 20-57 (88)
125 2elt_A Zinc finger protein 406 99.5 2E-14 7E-19 40.6 3.3 33 1-33 4-36 (36)
126 2cot_A Zinc finger protein 435 99.5 1.5E-14 5.3E-19 46.7 3.2 38 2-39 14-51 (77)
127 2elp_A Zinc finger protein 406 99.5 2.5E-14 8.6E-19 40.7 3.2 33 1-33 4-37 (37)
128 2elq_A Zinc finger protein 406 99.5 2.3E-14 7.9E-19 40.6 3.0 33 1-33 4-36 (36)
129 2elv_A Zinc finger protein 406 99.5 1.8E-14 6.1E-19 40.8 2.7 33 1-33 4-36 (36)
130 2ej4_A Zinc finger protein ZIC 99.5 1.6E-14 5.5E-19 47.9 2.9 33 7-39 63-95 (95)
131 2elr_A Zinc finger protein 406 99.5 3.3E-14 1.1E-18 40.2 3.2 33 1-33 4-36 (36)
132 2ct1_A Transcriptional repress 99.5 5.1E-14 1.7E-18 45.4 3.5 39 1-39 10-50 (77)
133 3iuf_A Zinc finger protein UBI 99.5 2.4E-14 8.3E-19 43.0 2.4 33 1-33 2-35 (48)
134 2els_A Zinc finger protein 406 99.5 6.4E-14 2.2E-18 39.6 3.2 33 1-33 4-36 (36)
135 2adr_A ADR1; transcription reg 99.5 3.6E-14 1.2E-18 43.9 2.8 35 5-39 1-35 (60)
136 1fv5_A First zinc finger of U- 99.5 1.8E-14 6.3E-19 41.4 1.9 31 1-38 3-33 (36)
137 2lce_A B-cell lymphoma 6 prote 99.5 3.4E-14 1.2E-18 45.6 2.7 35 1-35 40-74 (74)
138 1p7a_A BF3, BKLF, kruppel-like 99.5 6.5E-14 2.2E-18 39.8 3.0 32 1-32 6-37 (37)
139 2ctd_A Zinc finger protein 512 99.5 1.5E-14 5E-19 48.6 1.6 36 3-39 31-67 (96)
140 2gqj_A Zinc finger protein KIA 99.5 6.5E-15 2.2E-19 49.4 0.6 38 1-38 19-58 (98)
141 2elm_A Zinc finger protein 406 99.5 7.3E-14 2.5E-18 39.8 2.8 32 1-32 4-36 (37)
142 1vd4_A Transcription initiatio 99.5 2.2E-14 7.7E-19 44.9 1.6 36 1-39 9-44 (62)
143 1f2i_G Fusion of N-terminal 17 99.5 1.6E-13 5.5E-18 43.8 3.5 39 1-39 14-54 (73)
144 1bbo_A Human enhancer-binding 99.4 1.3E-13 4.3E-18 42.3 2.9 33 6-38 1-33 (57)
145 1llm_C Chimera of ZIF23-GCN4; 99.4 1.1E-13 3.9E-18 45.5 3.0 36 4-39 1-36 (88)
146 2ghf_A ZHX1, zinc fingers and 99.4 1.3E-13 4.4E-18 46.9 3.1 38 2-39 14-55 (102)
147 1va1_A Transcription factor SP 99.4 1.5E-13 5.1E-18 39.2 2.7 33 1-33 3-37 (37)
148 2csh_A Zinc finger protein 297 99.4 3.5E-13 1.2E-17 45.7 3.8 37 1-38 5-41 (110)
149 2dmd_A Zinc finger protein 64, 99.4 3.1E-13 1.1E-17 44.8 3.6 36 3-38 33-68 (96)
150 2epp_A POZ-, at HOOK-, and zin 99.4 3.5E-13 1.2E-17 43.0 3.2 33 1-33 8-40 (66)
151 2epa_A Krueppel-like factor 10 99.4 6.8E-13 2.3E-17 42.3 3.8 36 3-38 14-51 (72)
152 2ee8_A Protein ODD-skipped-rel 99.4 2.5E-13 8.5E-18 45.8 2.7 33 5-37 44-76 (106)
153 2kmk_A Zinc finger protein GFI 99.4 1.4E-13 4.8E-18 44.5 1.9 38 2-39 25-62 (82)
154 1a1h_A QGSR zinc finger peptid 99.4 1.6E-13 5.4E-18 45.1 2.0 36 3-38 31-66 (90)
155 1x6h_A Transcriptional repress 99.4 8.5E-13 2.9E-17 43.0 3.6 38 1-38 10-51 (86)
156 2yt9_A Zinc finger-containing 99.4 1E-12 3.5E-17 43.5 3.8 35 3-37 4-38 (95)
157 2dlq_A GLI-kruppel family memb 99.4 8.7E-13 3E-17 45.3 3.6 38 2-39 62-99 (124)
158 2csh_A Zinc finger protein 297 99.4 3.8E-13 1.3E-17 45.6 2.7 38 2-39 33-70 (110)
159 2yt9_A Zinc finger-containing 99.4 1.2E-12 4.1E-17 43.4 3.7 39 1-39 30-70 (95)
160 1ncs_A Peptide M30F, transcrip 99.4 3.5E-13 1.2E-17 40.2 2.0 33 1-33 13-47 (47)
161 2dmd_A Zinc finger protein 64, 99.4 1.3E-12 4.5E-17 43.3 3.3 38 2-39 4-41 (96)
162 2kfq_A FP1; protein, de novo p 99.4 6.2E-15 2.1E-19 41.0 -2.1 31 5-35 1-31 (32)
163 2rpc_A Zinc finger protein ZIC 99.4 4.2E-13 1.4E-17 47.6 2.1 38 1-38 115-154 (155)
164 2eod_A TNF receptor-associated 99.3 1.1E-12 3.8E-17 41.3 2.7 34 3-38 7-40 (66)
165 2m0d_A Zinc finger and BTB dom 99.3 1.4E-12 4.7E-17 35.2 2.6 30 4-33 1-30 (30)
166 2i13_A AART; DNA binding, zinc 99.3 5E-13 1.7E-17 48.6 2.0 36 3-38 130-165 (190)
167 2wbt_A B-129; zinc finger; 2.7 99.3 2.2E-13 7.4E-18 47.3 0.8 36 2-39 70-105 (129)
168 2jp9_A Wilms tumor 1; DNA bind 99.3 5.9E-13 2E-17 45.4 1.9 35 3-37 63-97 (119)
169 1rik_A E6APC1 peptide; E6-bind 99.3 1.9E-12 6.4E-17 34.8 2.6 29 5-33 1-29 (29)
170 2wbs_A Krueppel-like factor 4; 99.3 3.1E-12 1.1E-16 41.9 3.3 38 1-38 30-69 (89)
171 1zfd_A SWI5; DNA binding motif 99.3 3.5E-12 1.2E-16 35.0 3.0 30 4-33 1-32 (32)
172 1ard_A Yeast transcription fac 99.3 3.4E-12 1.2E-16 34.2 2.7 29 5-33 1-29 (29)
173 2dlq_A GLI-kruppel family memb 99.3 5.4E-12 1.8E-16 43.3 3.7 37 2-38 3-39 (124)
174 2m0f_A Zinc finger and BTB dom 99.3 2.4E-12 8.2E-17 34.5 2.3 29 5-33 1-29 (29)
175 2ee8_A Protein ODD-skipped-rel 99.3 3.7E-12 1.3E-16 42.9 3.2 37 1-37 68-104 (106)
176 2m0e_A Zinc finger and BTB dom 99.3 2.8E-12 9.5E-17 34.3 2.4 29 5-33 1-29 (29)
177 1klr_A Zinc finger Y-chromosom 99.3 4.9E-12 1.7E-16 34.0 2.8 30 5-34 1-30 (30)
178 1wjp_A Zinc finger protein 295 99.3 2.1E-12 7.3E-17 43.6 2.4 38 1-38 64-102 (107)
179 2dlk_A Novel protein; ZF-C2H2 99.3 1E-11 3.4E-16 40.0 3.6 38 2-39 3-43 (79)
180 1x5w_A Zinc finger protein 64, 99.3 5.1E-12 1.7E-16 40.1 2.7 36 1-36 32-67 (70)
181 2ebt_A Krueppel-like factor 5; 99.3 6.8E-12 2.3E-16 41.8 3.1 37 2-38 41-79 (100)
182 1ubd_C Protein (YY1 zinc finge 99.3 8.6E-12 3E-16 42.9 3.4 36 2-37 58-95 (124)
183 1bbo_A Human enhancer-binding 99.3 5.7E-12 1.9E-16 38.5 2.6 33 1-33 24-56 (57)
184 1sp2_A SP1F2; zinc finger, tra 99.3 4.9E-12 1.7E-16 34.5 2.2 29 5-33 1-31 (31)
185 2gli_A Protein (five-finger GL 99.3 6.6E-12 2.3E-16 44.4 2.9 37 2-38 93-132 (155)
186 2rpc_A Zinc finger protein ZIC 99.2 3.4E-12 1.2E-16 45.2 1.8 36 3-38 87-124 (155)
187 2kvh_A Zinc finger and BTB dom 99.2 9.4E-12 3.2E-16 33.0 2.2 27 4-30 1-27 (27)
188 1a1h_A QGSR zinc finger peptid 99.2 1.2E-11 4.1E-16 40.6 2.9 37 3-39 1-39 (90)
189 2kvf_A Zinc finger and BTB dom 99.2 8E-12 2.7E-16 33.3 2.0 28 4-31 1-28 (28)
190 2ctu_A Zinc finger protein 483 99.2 8.6E-14 3E-18 44.2 -2.4 36 4-39 37-72 (73)
191 2lvt_A Zinc finger and BTB dom 98.9 1E-12 3.5E-17 35.4 0.0 29 5-33 1-29 (29)
192 1ubd_C Protein (YY1 zinc finge 99.2 1.7E-11 6E-16 42.1 3.1 36 3-38 31-66 (124)
193 2lvr_A Zinc finger and BTB dom 98.9 1.1E-12 3.8E-17 35.5 0.0 30 4-33 1-30 (30)
194 2i13_A AART; DNA binding, zinc 99.2 6.5E-12 2.2E-16 45.7 1.9 36 3-38 102-137 (190)
195 1paa_A Yeast transcription fac 99.2 1.2E-11 4.1E-16 33.3 2.1 29 5-33 1-30 (30)
196 2j7j_A Transcription factor II 99.2 1.6E-11 5.6E-16 39.8 2.7 33 6-38 1-35 (85)
197 2kvg_A Zinc finger and BTB dom 99.2 7.5E-12 2.6E-16 33.3 1.6 27 4-30 1-27 (27)
198 2jp9_A Wilms tumor 1; DNA bind 99.2 2.7E-11 9.4E-16 41.3 3.2 37 2-38 2-40 (119)
199 2kmk_A Zinc finger protein GFI 99.2 2.1E-11 7.1E-16 39.4 2.7 34 6-39 1-34 (82)
200 2ctd_A Zinc finger protein 512 99.2 2E-11 6.8E-16 41.0 2.7 35 3-37 59-94 (96)
201 2lv2_A Insulinoma-associated p 99.2 2E-11 7E-16 40.4 2.6 33 1-33 51-84 (85)
202 2dmi_A Teashirt homolog 3; zin 99.2 4.7E-11 1.6E-15 40.7 3.5 36 1-36 14-51 (115)
203 1znf_A 31ST zinc finger from X 99.2 2E-11 6.7E-16 32.2 2.1 27 6-32 1-27 (27)
204 1wjp_A Zinc finger protein 295 99.2 2E-11 7E-16 41.2 2.3 34 2-37 12-45 (107)
205 1x6h_A Transcriptional repress 99.2 9E-11 3.1E-15 38.2 3.7 34 5-38 46-79 (86)
206 1tf6_A Protein (transcription 99.2 6.8E-11 2.3E-15 43.1 3.5 36 3-38 101-138 (190)
207 1x6e_A Zinc finger protein 24; 99.2 3.4E-11 1.1E-15 38.3 2.4 34 1-34 37-70 (72)
208 2gli_A Protein (five-finger GL 99.1 2.5E-11 8.7E-16 42.9 2.1 36 3-38 64-101 (155)
209 2gqj_A Zinc finger protein KIA 99.1 9.8E-12 3.3E-16 41.7 -0.1 33 4-36 52-84 (98)
210 1tf6_A Protein (transcription 99.1 5.2E-11 1.8E-15 43.3 1.5 34 4-37 40-75 (190)
211 2lvu_A Zinc finger and BTB dom 98.6 2E-11 6.7E-16 32.1 0.0 25 5-29 1-25 (26)
212 2ab3_A ZNF29; zinc finger prot 99.0 2.6E-10 8.7E-15 30.3 2.2 27 5-31 1-29 (29)
213 3uk3_C Zinc finger protein 217 99.0 1E-10 3.5E-15 35.6 1.5 29 2-30 28-56 (57)
214 2dmi_A Teashirt homolog 3; zin 99.0 6.7E-10 2.3E-14 37.8 3.6 34 1-34 75-108 (115)
215 2eod_A TNF receptor-associated 99.0 3.1E-10 1.1E-14 35.6 2.6 33 2-34 32-65 (66)
216 2wbs_A Krueppel-like factor 4; 99.0 3.7E-10 1.3E-14 36.9 2.6 35 4-38 3-39 (89)
217 2adr_A ADR1; transcription reg 99.0 4.4E-10 1.5E-14 34.5 2.4 32 1-32 25-57 (60)
218 2ebt_A Krueppel-like factor 5; 99.0 1.2E-09 4.2E-14 36.3 3.6 35 4-38 13-49 (100)
219 2j7j_A Transcription factor II 99.0 2E-10 6.8E-15 37.2 1.5 34 2-38 27-62 (85)
220 2drp_A Protein (tramtrack DNA- 99.0 8.7E-10 3E-14 34.4 2.9 30 2-31 36-65 (66)
221 1f2i_G Fusion of N-terminal 17 98.9 2E-10 6.7E-15 36.5 0.8 29 2-30 45-73 (73)
222 1llm_C Chimera of ZIF23-GCN4; 98.9 8.8E-11 3E-15 38.5 -0.6 36 1-37 26-61 (88)
223 2d9k_A FLN29 gene product; zin 98.8 1.6E-09 5.4E-14 35.0 1.3 35 2-38 13-47 (75)
224 2d9h_A Zinc finger protein 692 98.8 1.7E-08 5.7E-13 32.4 3.0 33 3-35 35-68 (78)
225 2ct1_A Transcriptional repress 98.7 2.4E-08 8.1E-13 32.0 3.3 28 4-31 43-70 (77)
226 2ej4_A Zinc finger protein ZIC 98.7 2.2E-08 7.5E-13 33.0 3.1 32 7-38 26-66 (95)
227 2epa_A Krueppel-like factor 10 98.7 6.9E-09 2.4E-13 32.8 1.2 29 1-29 42-72 (72)
228 2wbt_A B-129; zinc finger; 2.7 98.6 3.6E-08 1.2E-12 34.1 2.7 29 4-32 98-126 (129)
229 1zr9_A Zinc finger protein 593 98.6 1.1E-08 3.8E-13 36.0 0.7 28 1-28 45-72 (124)
230 2ctu_A Zinc finger protein 483 98.6 7.2E-09 2.5E-13 32.6 -0.0 31 1-38 13-43 (73)
231 2eps_A POZ-, at HOOK-, and zin 98.2 7.7E-07 2.6E-11 26.7 1.5 18 1-18 36-53 (54)
232 1yui_A GAGA-factor; complex (D 98.2 1E-07 3.4E-12 28.7 -0.7 27 13-39 3-29 (54)
233 1vd4_A Transcription initiatio 98.1 1.1E-06 3.7E-11 27.2 0.7 21 1-21 34-54 (62)
234 1zw8_A Zinc-responsive transcr 97.4 0.00037 1.3E-08 21.9 2.6 30 10-39 7-43 (64)
235 2e72_A POGO transposable eleme 97.1 0.00078 2.7E-08 20.3 2.5 27 5-31 11-37 (49)
236 1fu9_A U-shaped transcriptiona 96.5 0.003 1E-07 18.0 3.0 29 5-33 7-35 (36)
237 3mjh_B Early endosome antigen 95.3 0.015 5.1E-07 16.3 2.7 25 4-28 3-27 (34)
238 2jsp_A Transcriptional regulat 95.2 0.01 3.4E-07 20.1 1.1 25 7-34 22-46 (87)
239 3sp4_A Aprataxin-like protein; 95.1 0.024 8.2E-07 21.9 2.1 26 4-29 167-193 (204)
240 1zu1_A DSRBP-ZFA, RNA binding 95.0 0.024 8.3E-07 20.1 1.9 24 4-27 91-114 (127)
241 2yrk_A Zinc finger homeobox pr 94.7 0.023 7.9E-07 17.6 1.3 21 7-27 14-34 (55)
242 1wir_A Protein arginine N-meth 93.1 0.13 4.6E-06 18.4 2.6 28 4-31 13-40 (121)
243 2elu_A Zinc finger protein 406 89.3 0.22 7.7E-06 13.8 2.2 24 6-29 9-32 (37)
244 2gmg_A Hypothetical protein PF 88.9 0.18 6E-06 17.7 0.8 12 5-16 66-77 (105)
245 2czr_A TBP-interacting protein 88.8 0.36 1.2E-05 18.7 1.7 23 7-30 155-177 (226)
246 2i5o_A DNA polymerase ETA; zin 87.4 0.36 1.2E-05 13.9 2.4 24 5-29 8-31 (39)
247 2jvx_A NF-kappa-B essential mo 87.3 0.31 1.1E-05 13.0 1.6 21 7-27 4-24 (28)
248 2hqh_E Restin; beta/BETA struc 86.4 0.22 7.5E-06 13.1 0.4 9 4-13 2-10 (26)
249 1wys_A Riken cDNA 2310008M20 p 84.4 0.4 1.4E-05 15.8 0.7 15 5-19 28-42 (75)
250 1yuz_A Nigerythrin; rubrythrin 83.5 0.53 1.8E-05 18.2 1.0 11 6-16 171-181 (202)
251 4ayb_P DNA-directed RNA polyme 83.3 0.48 1.7E-05 14.3 0.7 14 6-19 3-16 (48)
252 2odx_A Cytochrome C oxidase po 82.4 0.84 2.9E-05 15.2 1.2 13 5-17 55-67 (80)
253 1v54_F VI, cytochrome C oxidas 81.7 0.8 2.7E-05 15.9 1.1 13 5-17 78-90 (98)
254 1x4v_A Hypothetical protein LO 79.7 0.77 2.6E-05 14.6 0.7 14 5-18 26-39 (63)
255 2y69_F Cytochrome C oxidase su 78.5 1.1 3.9E-05 16.3 1.1 13 5-17 109-121 (129)
256 3ax1_A Serrate RNA effector mo 76.2 1.1 3.7E-05 19.1 0.9 26 6-31 304-331 (358)
257 1wfe_A Riken cDNA 2310008M20 p 75.4 1.2 4.1E-05 15.0 0.7 15 5-19 39-53 (86)
258 2djr_A Zinc finger BED domain- 74.2 2.2 7.4E-05 14.1 2.2 23 7-29 29-58 (76)
259 6rxn_A Rubredoxin; electron tr 73.8 1.5 5E-05 13.1 0.7 12 6-17 4-15 (46)
260 1ej6_B Lambda1; icosahedral, n 72.8 0.73 2.5E-05 22.5 0.0 24 7-30 181-204 (1275)
261 1yk4_A Rubredoxin, RD; electro 71.2 1.8 6E-05 13.2 0.7 11 6-16 2-12 (52)
262 1wil_A KIAA1045 protein; ring 69.1 2.9 9.9E-05 14.3 1.1 15 3-17 26-40 (89)
263 3vk6_A E3 ubiquitin-protein li 69.1 3.6 0.00012 14.5 1.6 22 7-28 59-83 (101)
264 1e8j_A Rubredoxin; iron-sulfur 68.9 2.6 8.9E-05 12.8 1.0 12 6-17 3-14 (52)
265 4rxn_A Rubredoxin; electron tr 68.7 2.2 7.5E-05 13.1 0.7 12 6-17 3-14 (54)
266 1dxg_A Desulforedoxin; non-hem 67.7 2.3 7.9E-05 11.7 0.7 11 6-16 6-16 (36)
267 3hcs_A TNF receptor-associated 64.7 5.2 0.00018 14.7 2.7 10 22-31 152-161 (170)
268 2k5c_A Uncharacterized protein 64.4 2.8 9.5E-05 14.2 0.7 12 6-17 51-62 (95)
269 2v3b_B Rubredoxin 2, rubredoxi 64.2 2.6 9E-05 12.9 0.6 12 6-17 3-14 (55)
270 2kn9_A Rubredoxin; metalloprot 63.9 2.6 8.9E-05 14.2 0.6 13 5-17 26-38 (81)
271 2lo3_A SAGA-associated factor 63.7 3.4 0.00012 12.2 1.5 22 8-30 19-40 (44)
272 2pzo_E CAP-Gly domain-containi 63.1 2.4 8.2E-05 12.4 0.4 9 4-13 19-27 (42)
273 2jrr_A Uncharacterized protein 63.0 3.4 0.00011 13.4 0.8 17 4-20 38-54 (67)
274 1z60_A TFIIH basal transcripti 61.7 0.76 2.6E-05 14.4 -0.8 20 7-26 31-50 (59)
275 1s24_A Rubredoxin 2; electron 60.0 3.1 0.00011 14.2 0.5 12 6-17 35-46 (87)
276 3ga8_A HTH-type transcriptiona 59.5 5.1 0.00017 12.9 1.9 17 7-23 37-53 (78)
277 1x4s_A Protein FON, zinc finge 59.0 5 0.00017 12.7 1.6 21 6-26 26-46 (59)
278 1wjv_A Cell growth regulating 59.0 5.8 0.0002 13.3 1.7 10 7-16 11-20 (79)
279 1dx8_A Rubredoxin; electron tr 58.8 3.7 0.00012 13.3 0.6 13 5-17 6-18 (70)
280 2jvm_A Uncharacterized protein 57.9 5.8 0.0002 13.4 1.0 16 5-20 52-67 (80)
281 1twf_L ABC10-alpha, DNA-direct 57.7 4.4 0.00015 13.2 0.7 15 5-19 27-41 (70)
282 2kdx_A HYPA, hydrogenase/ureas 56.7 4.4 0.00015 14.2 0.7 13 6-18 73-85 (119)
283 2lcq_A Putative toxin VAPC6; P 55.4 4.3 0.00015 15.0 0.6 13 6-18 132-144 (165)
284 2yqq_A Zinc finger HIT domain- 55.0 6 0.00021 12.3 1.7 23 6-28 23-45 (56)
285 3iyl_X VP3; non-enveloped viru 53.0 2.9 9.8E-05 20.7 0.0 22 6-27 116-137 (1214)
286 1wff_A Riken cDNA 2810002D23 p 52.3 7.5 0.00026 13.3 0.9 13 6-19 40-52 (85)
287 1qyp_A RNA polymerase II; tran 49.6 6.5 0.00022 11.8 0.6 10 7-16 44-53 (57)
288 1loi_A Cyclic 3',5'-AMP specif 47.0 2.3 7.8E-05 10.7 -0.5 10 7-16 6-15 (26)
289 1lko_A Rubrerythrin all-iron(I 46.6 7 0.00024 15.0 0.6 12 6-17 155-166 (191)
290 3pwf_A Rubrerythrin; non heme 44.4 12 0.00042 14.2 1.1 13 5-17 137-149 (170)
291 1wfl_A Zinc finger protein 216 43.0 12 0.00042 12.4 1.0 12 6-18 39-50 (74)
292 1tfi_A Transcriptional elongat 42.9 8.9 0.0003 11.5 0.5 9 7-15 38-46 (50)
293 3jyw_9 60S ribosomal protein L 42.8 8.8 0.0003 12.6 0.5 10 6-15 26-35 (72)
294 4a17_Y RPL37A, 60S ribosomal p 42.1 11 0.00037 13.4 0.7 9 6-14 36-44 (103)
295 1wg2_A Zinc finger (AN1-like) 41.8 12 0.00042 12.0 1.0 12 6-18 29-40 (64)
296 3j21_i 50S ribosomal protein L 41.8 9.3 0.00032 13.0 0.5 10 6-15 35-44 (83)
297 3by4_A OTU1, ubiquitin thioest 41.1 5.7 0.00019 15.6 0.0 21 5-25 179-199 (212)
298 3e2u_E CAP-Gly domain-containi 41.0 10 0.00034 11.2 0.5 9 4-13 19-27 (42)
299 2pq8_A Probable histone acetyl 40.9 23 0.00078 14.9 2.7 26 5-30 35-60 (278)
300 1l8d_A DNA double-strand break 40.9 9.7 0.00033 13.0 0.6 10 8-17 49-58 (112)
301 1fiw_L Beta-acrosin light chai 40.7 8.6 0.0003 10.0 0.5 8 12-19 9-16 (26)
302 1lv3_A Hypothetical protein YA 40.7 10 0.00035 12.4 0.6 11 7-17 10-20 (68)
303 1vq8_Z 50S ribosomal protein L 40.4 11 0.00036 12.7 0.6 10 7-16 46-55 (83)
304 2ct5_A Zinc finger BED domain 40.3 13 0.00046 12.1 2.0 24 7-30 30-56 (73)
305 3iz5_m 60S ribosomal protein L 39.7 10 0.00035 13.1 0.5 9 6-14 36-44 (92)
306 1fiz_L Beta-acrosin light chai 39.0 9.4 0.00032 9.9 0.7 12 8-19 5-17 (26)
307 1wfp_A Zinc finger (AN1-like) 38.9 15 0.00051 12.2 0.9 12 6-18 39-50 (74)
308 1vfy_A Phosphatidylinositol-3- 38.8 14 0.00047 11.8 1.1 11 7-17 28-38 (73)
309 3izc_m 60S ribosomal protein R 38.0 11 0.00037 13.1 0.5 9 6-14 36-44 (92)
310 1twf_J DNA-directed RNA polyme 37.7 16 0.00053 12.0 0.9 15 5-19 3-17 (70)
311 3eph_A TRNA isopentenyltransfe 36.8 19 0.00066 15.9 1.2 23 5-27 359-387 (409)
312 1dvp_A HRS, hepatocyte growth 36.5 22 0.00075 13.9 1.2 13 6-18 177-189 (220)
313 2ou2_A Histone acetyltransfera 36.2 29 0.00098 14.7 2.7 26 4-29 32-57 (280)
314 1joc_A EEA1, early endosomal a 36.0 20 0.00069 12.9 1.2 12 7-18 86-97 (125)
315 3to7_A Histone acetyltransfera 36.0 29 0.00099 14.7 1.9 25 4-28 34-58 (276)
316 1y02_A CARP2, FYVE-ring finger 35.3 20 0.00069 12.9 1.0 12 7-18 36-47 (120)
317 3a43_A HYPD, hydrogenase nicke 34.6 14 0.00049 13.5 0.6 12 7-18 71-82 (139)
318 1ptq_A Protein kinase C delta 34.6 14 0.00047 10.5 0.9 12 5-16 10-21 (50)
319 1wfh_A Zinc finger (AN1-like) 34.5 17 0.00059 11.7 0.9 12 6-18 29-40 (64)
320 1ffk_W Ribosomal protein L37AE 34.5 13 0.00044 12.3 0.4 9 6-14 27-35 (73)
321 1vzi_A Desulfoferrodoxin; ferr 34.4 16 0.00054 13.2 0.7 11 6-16 7-17 (126)
322 1x4u_A Zinc finger, FYVE domai 34.2 18 0.00062 11.8 1.2 12 7-18 31-42 (84)
323 2jyp_A Aragonite protein AP7; 33.8 13 0.00045 10.1 0.7 10 4-13 6-16 (36)
324 2l8e_A Polyhomeotic-like prote 33.5 16 0.00055 11.0 0.9 12 7-18 19-30 (49)
325 3h0g_L DNA-directed RNA polyme 33.2 18 0.00061 11.6 0.7 14 5-18 20-33 (63)
326 2ozu_A Histone acetyltransfera 32.7 34 0.0012 14.5 2.5 25 5-29 40-64 (284)
327 3cc2_Z 50S ribosomal protein L 31.9 17 0.00059 13.2 0.6 10 7-16 79-88 (116)
328 2yw8_A RUN and FYVE domain-con 31.8 20 0.0007 11.7 1.2 11 7-17 36-46 (82)
329 1hcw_A BBA1; growth response p 31.4 13 0.00045 9.3 1.9 19 13-31 6-24 (26)
330 2ds5_A CLPX, ATP-dependent CLP 30.7 19 0.00064 10.9 0.6 11 7-17 12-22 (51)
331 1yop_A KTI11P; zinc finger, me 30.7 17 0.00058 12.3 0.5 14 6-20 23-36 (83)
332 1ovx_A ATP-dependent CLP prote 30.5 18 0.00062 11.8 0.5 10 7-16 19-28 (67)
333 3zyq_A Hepatocyte growth facto 30.1 29 0.00099 13.8 1.1 12 7-18 181-192 (226)
334 2jz8_A Uncharacterized protein 29.6 19 0.00065 12.4 0.5 17 5-21 47-63 (87)
335 1ef4_A Subunit N, DNA-directed 29.4 16 0.00055 11.4 0.3 15 5-19 2-16 (55)
336 1wfk_A Zinc finger, FYVE domai 29.4 24 0.00083 11.8 0.9 11 7-17 26-36 (88)
337 1z2q_A LM5-1; membrane protein 29.2 24 0.00081 11.6 1.2 11 7-17 38-48 (84)
338 4ayb_N DNA-directed RNA polyme 28.5 22 0.00075 11.6 0.6 15 5-19 3-17 (66)
339 2co8_A NEDD9 interacting prote 28.4 23 0.0008 11.3 0.9 12 7-18 43-54 (82)
340 1gh9_A 8.3 kDa protein (gene M 28.3 25 0.00084 11.5 0.9 11 5-16 20-30 (71)
341 1faq_A RAF-1; transferase, ser 28.1 20 0.00067 10.3 0.9 12 5-16 13-24 (52)
342 3t7l_A Zinc finger FYVE domain 27.1 28 0.00094 11.7 1.2 10 7-16 37-46 (90)
343 3o9x_A Uncharacterized HTH-typ 27.0 30 0.001 12.0 1.8 15 7-21 37-51 (133)
344 3f6q_B LIM and senescent cell 26.9 23 0.00077 10.6 0.6 11 7-17 40-50 (72)
345 2uzg_A Ubiquitin carboxyl-term 26.4 30 0.001 11.8 0.8 14 4-17 36-51 (97)
346 2jr7_A DPH3 homolog; DESR1, CS 25.1 28 0.00097 12.0 0.6 14 6-20 23-36 (89)
347 2l9z_A PR domain zinc finger p 23.9 25 0.00086 10.1 0.9 12 7-18 12-23 (39)
348 1x4l_A Skeletal muscle LIM-pro 23.4 29 0.00097 10.5 0.7 11 7-17 36-46 (72)
349 2enz_A NPKC-theta, protein kin 23.2 29 0.001 10.6 1.4 11 5-15 22-32 (65)
350 3po3_S Transcription elongatio 23.1 32 0.0011 13.3 0.7 9 7-15 166-174 (178)
351 2ct7_A Ring finger protein 31; 23.1 33 0.0011 11.2 1.1 11 7-17 44-54 (86)
352 3h0g_I DNA-directed RNA polyme 23.0 38 0.0013 11.9 0.8 9 7-15 101-109 (113)
353 3alr_A Nanos protein; zinc-fin 23.0 28 0.00097 12.4 0.5 9 6-14 71-79 (106)
354 3j21_j 50S ribosomal protein L 23.0 32 0.0011 12.0 0.6 10 7-16 69-78 (94)
355 1x61_A Thyroid receptor intera 22.9 29 0.00099 10.5 0.7 10 7-16 34-43 (72)
356 1nyp_A Pinch protein; LIM doma 22.6 29 0.00098 10.3 0.9 11 7-17 32-42 (66)
357 1wig_A KIAA1808 protein; LIM d 22.6 29 0.001 10.7 0.5 11 7-17 32-42 (73)
358 1mzb_A Ferric uptake regulatio 22.1 32 0.0011 12.2 0.6 12 7-18 92-103 (136)
359 1d4u_A Nucleotide excision rep 22.0 42 0.0014 12.1 0.8 11 8-18 7-17 (111)
360 4fyy_B Aspartate carbamoyltran 21.8 33 0.0011 13.1 0.6 14 6-19 135-148 (153)
361 3eyy_A Putative iron uptake re 21.6 34 0.0012 12.4 0.6 12 7-18 91-102 (145)
362 4i1l_A Scurfin, forkhead box p 21.6 41 0.0014 11.8 0.8 19 9-27 17-35 (93)
363 1zfo_A LAsp-1; LIM domain, zin 21.6 24 0.00083 9.1 0.6 10 8-17 5-14 (31)
364 2iyb_E Testin, TESS, TES; LIM 21.3 31 0.0011 10.3 0.9 12 6-17 32-43 (65)
365 1wyh_A SLIM 2, skeletal muscle 21.1 33 0.0011 10.4 0.8 11 7-17 34-44 (72)
366 4b6d_A RAC GTPase-activating p 20.9 34 0.0012 10.6 0.7 9 5-13 34-42 (61)
367 2enn_A NPKC-theta, protein kin 20.7 37 0.0013 10.9 0.9 12 5-16 33-44 (77)
368 3q87_A Putative uncharacterize 20.7 27 0.00091 12.8 0.3 14 6-19 99-112 (125)
369 1wvk_A AT2G23090/F21P24.15; st 20.6 42 0.0014 11.5 2.4 23 6-28 45-70 (86)
370 2xoc_A E3 ubiquitin-protein li 20.5 54 0.0018 13.8 1.1 14 5-18 103-116 (261)
371 1y8f_A UNC-13 homolog A, MUNC1 20.4 27 0.00093 10.8 0.2 10 6-15 24-33 (66)
372 2cur_A Skeletal muscle LIM-pro 20.4 34 0.0011 10.3 0.5 11 7-17 32-42 (69)
373 2d8z_A Four and A half LIM dom 20.4 34 0.0012 10.3 0.6 11 7-17 32-42 (70)
374 1rfh_A RAS association (ralgds 20.4 34 0.0012 10.3 1.4 12 5-16 21-32 (59)
375 2db6_A SH3 and cysteine rich d 20.4 33 0.0011 10.9 0.4 12 5-16 27-38 (74)
376 3na7_A HP0958; flagellar bioge 20.2 48 0.0016 13.4 0.9 18 5-22 221-238 (256)
377 1wii_A Hypothetical UPF0222 pr 20.1 33 0.0011 11.7 0.4 8 7-14 24-31 (85)
378 2d8x_A Protein pinch; LIM doma 20.1 35 0.0012 10.3 0.9 12 7-18 32-43 (70)
No 1
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.79 E-value=3.5e-19 Score=52.65 Aligned_cols=39 Identities=13% Similarity=0.152 Sum_probs=36.8
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|+++++|.|..|++.|.....|..|++.|+++++|.|.+
T Consensus 5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 43 (43)
T 2yrm_A 5 SSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG 43 (43)
T ss_dssp CSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred cCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence 578899999999999999999999999999999999975
No 2
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.78 E-value=5.2e-19 Score=52.83 Aligned_cols=39 Identities=28% Similarity=0.318 Sum_probs=36.7
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|++++||.|..|++.|.....|..|+++|+++++|.|.+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2em4_A 7 GTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS 45 (46)
T ss_dssp CCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred cCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence 578899999999999999999999999999999999974
No 3
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=99.78 E-value=6.7e-19 Score=52.58 Aligned_cols=39 Identities=28% Similarity=0.292 Sum_probs=36.7
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|++++||.|..|++.|.....|..|+++|+++++|.|.+
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2emj_A 7 GTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS 45 (46)
T ss_dssp CCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred CCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence 568899999999999999999999999999999999974
No 4
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=99.78 E-value=2.9e-19 Score=56.17 Aligned_cols=37 Identities=24% Similarity=0.527 Sum_probs=34.3
Q ss_pred CCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 3 PTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 3 ~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
.|+||.|..|++.|.....|..|+++|++++||.|.+
T Consensus 1 SEKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~ 37 (60)
T 4gzn_C 1 SERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPE 37 (60)
T ss_dssp CCCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTT
T ss_pred CCCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCC
Confidence 3789999999999999999999999999999999964
No 5
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.78 E-value=6.4e-19 Score=52.62 Aligned_cols=39 Identities=31% Similarity=0.332 Sum_probs=36.7
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|+++++|.|..|++.|.....|..|+++|+++++|.|.+
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2en9_A 7 GAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS 45 (46)
T ss_dssp CCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred CCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence 578899999999999999999999999999999999974
No 6
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.78 E-value=7.7e-19 Score=52.39 Aligned_cols=39 Identities=23% Similarity=0.212 Sum_probs=36.7
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|++++||.|..|++.|.....|..|++.|.++++|.|.+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2eow_A 7 GTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS 45 (46)
T ss_dssp SCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred CCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence 568899999999999999999999999999999999974
No 7
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=99.78 E-value=1.1e-18 Score=52.11 Aligned_cols=39 Identities=23% Similarity=0.258 Sum_probs=36.7
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|++++||.|..|++.|.....|..|+++|+++++|.|.+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2ely_A 7 GTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSS 45 (46)
T ss_dssp CCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCC
T ss_pred CCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence 578899999999999999999999999999999999974
No 8
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.78 E-value=6.9e-19 Score=52.59 Aligned_cols=39 Identities=28% Similarity=0.249 Sum_probs=36.6
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|+++++|.|..|++.|.....|..|++.|+++++|.|.+
T Consensus 7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2eom_A 7 GHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS 45 (46)
T ss_dssp CCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred CCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence 568899999999999999999999999999999999974
No 9
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.77 E-value=9.6e-19 Score=52.20 Aligned_cols=39 Identities=28% Similarity=0.390 Sum_probs=36.6
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|++++||.|..|++.|.....|..|+++|.++++|.|++
T Consensus 7 H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2em3_A 7 GTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS 45 (46)
T ss_dssp CSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred CCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence 568899999999999999999999999999999999974
No 10
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.77 E-value=8.8e-19 Score=51.89 Aligned_cols=39 Identities=18% Similarity=0.215 Sum_probs=36.7
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|++++||.|..|++.|.....|..|++.|+++++|.|.+
T Consensus 5 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 43 (44)
T 2emx_A 5 SSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSS 43 (44)
T ss_dssp CSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCC
T ss_pred cCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence 578899999999999999999999999999999999974
No 11
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.77 E-value=8.9e-19 Score=52.27 Aligned_cols=39 Identities=28% Similarity=0.294 Sum_probs=36.6
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|++++||.|..|++.|.....|..|+++|++++||.|.+
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2ytn_A 7 GTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS 45 (46)
T ss_dssp CSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCC
T ss_pred CCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCC
Confidence 568899999999999999999999999999999999974
No 12
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.77 E-value=1.3e-18 Score=51.98 Aligned_cols=39 Identities=28% Similarity=0.342 Sum_probs=36.7
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|+++++|.|..|++.|.....|..|++.|+++++|.|.+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2em2_A 7 GSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSS 45 (46)
T ss_dssp CCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSC
T ss_pred CCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence 578899999999999999999999999999999999974
No 13
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.77 E-value=9.4e-19 Score=52.19 Aligned_cols=39 Identities=31% Similarity=0.388 Sum_probs=36.6
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|++++||.|..|++.|.....|..|+++|++++||.|.+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~ 45 (46)
T 2yts_A 7 GTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS 45 (46)
T ss_dssp CCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred CCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence 568899999999999999999999999999999999974
No 14
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.77 E-value=7.5e-19 Score=52.41 Aligned_cols=39 Identities=26% Similarity=0.267 Sum_probs=36.6
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|++++||.|..|++.|.....|..|++.|+++++|.|.+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2ytf_A 7 GTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS 45 (46)
T ss_dssp SCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred CCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence 568899999999999999999999999999999999974
No 15
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.77 E-value=7.8e-19 Score=52.44 Aligned_cols=39 Identities=28% Similarity=0.271 Sum_probs=36.6
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|++++||.|..|++.|.....|..|+++|+++++|.|+.
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2ytp_A 7 GTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS 45 (46)
T ss_dssp SCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred cCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence 578899999999999999999999999999999999974
No 16
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.77 E-value=7.5e-19 Score=52.45 Aligned_cols=39 Identities=21% Similarity=0.210 Sum_probs=36.6
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|+++++|.|..|++.|.....|..|+++|+++++|.|.+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2emg_A 7 GTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS 45 (46)
T ss_dssp CCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred CCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence 568899999999999999999999999999999999974
No 17
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.77 E-value=1.2e-18 Score=51.96 Aligned_cols=39 Identities=31% Similarity=0.319 Sum_probs=36.6
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|++++||.|..|++.|.....|..|+++|.++++|.|.+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2emm_A 7 GTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSS 45 (46)
T ss_dssp SSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSC
T ss_pred cCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence 568899999999999999999999999999999999974
No 18
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.77 E-value=7.1e-19 Score=52.49 Aligned_cols=39 Identities=28% Similarity=0.280 Sum_probs=36.6
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|+++++|.|..|++.|.....|..|+++|++++||.|.+
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2enf_A 7 GTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS 45 (46)
T ss_dssp CCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred CCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence 568899999999999999999999999999999999974
No 19
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.77 E-value=1.1e-18 Score=52.06 Aligned_cols=39 Identities=21% Similarity=0.180 Sum_probs=36.7
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|+++++|.|..|++.|.....|..|++.|+++++|.|.+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2ytj_A 7 GTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSS 45 (46)
T ss_dssp TSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSC
T ss_pred CCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCC
Confidence 568899999999999999999999999999999999974
No 20
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.77 E-value=9.8e-19 Score=52.21 Aligned_cols=39 Identities=23% Similarity=0.244 Sum_probs=36.6
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|++++||.|..|++.|.....|..|++.|.++++|.|.+
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2emf_A 7 GTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSS 45 (46)
T ss_dssp SSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCC
T ss_pred cCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence 568899999999999999999999999999999999974
No 21
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.77 E-value=7.8e-19 Score=52.37 Aligned_cols=39 Identities=28% Similarity=0.396 Sum_probs=36.6
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|++++||.|..|++.|.....|..|++.|++++||.|++
T Consensus 7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~ 45 (46)
T 2eor_A 7 GTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS 45 (46)
T ss_dssp SSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred cCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence 568899999999999999999999999999999999974
No 22
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.77 E-value=1.3e-18 Score=51.93 Aligned_cols=39 Identities=26% Similarity=0.273 Sum_probs=36.6
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|++++||.|..|++.|.....|..|+++|.++++|.|.+
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2emy_A 7 GTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSS 45 (46)
T ss_dssp CCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSC
T ss_pred CCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCC
Confidence 568899999999999999999999999999999999974
No 23
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.77 E-value=5.9e-19 Score=52.73 Aligned_cols=39 Identities=26% Similarity=0.305 Sum_probs=36.6
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|++++||.|..|++.|.....|..|++.|+++++|.|++
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2eon_A 7 GTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS 45 (46)
T ss_dssp CSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred CCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence 568899999999999999999999999999999999974
No 24
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.77 E-value=7.1e-19 Score=52.50 Aligned_cols=39 Identities=26% Similarity=0.295 Sum_probs=36.6
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|+++++|.|..|++.|.....|..|++.|++++||.|.+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2ep3_A 7 GTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSS 45 (46)
T ss_dssp SSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTC
T ss_pred CCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence 568899999999999999999999999999999999974
No 25
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.77 E-value=8.7e-19 Score=52.30 Aligned_cols=39 Identities=28% Similarity=0.304 Sum_probs=36.6
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|+++++|.|..|++.|.....|..|+++|.++++|.|.+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2eq2_A 7 GTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS 45 (46)
T ss_dssp SSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred cCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence 568899999999999999999999999999999999974
No 26
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.77 E-value=1.2e-18 Score=51.98 Aligned_cols=39 Identities=31% Similarity=0.375 Sum_probs=36.6
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|+++++|.|..|++.|.....|..|++.|++++||.|.+
T Consensus 7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2ytk_A 7 GSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSS 45 (46)
T ss_dssp SSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCC
T ss_pred CCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCC
Confidence 568899999999999999999999999999999999974
No 27
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.77 E-value=7.3e-19 Score=52.31 Aligned_cols=39 Identities=26% Similarity=0.303 Sum_probs=36.6
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|+++++|.|..|++.|.....|..|+++|+++++|.|.+
T Consensus 7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (45)
T 2epu_A 7 GTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSSG 45 (45)
T ss_dssp CCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSCC
T ss_pred CCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCCC
Confidence 568899999999999999999999999999999999974
No 28
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.77 E-value=9.7e-19 Score=52.19 Aligned_cols=39 Identities=26% Similarity=0.320 Sum_probs=36.7
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|++++||.|..|++.|.....|..|++.|.++++|.|.+
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2emh_A 7 GTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSS 45 (46)
T ss_dssp CSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCC
T ss_pred CCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence 578899999999999999999999999999999999974
No 29
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.77 E-value=1.2e-18 Score=51.97 Aligned_cols=39 Identities=28% Similarity=0.319 Sum_probs=36.7
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|++++||.|..|++.|.....|..|++.|.++++|.|.+
T Consensus 7 H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2eoe_A 7 GTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSS 45 (46)
T ss_dssp CCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCC
T ss_pred CCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCC
Confidence 568899999999999999999999999999999999974
No 30
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.77 E-value=1.2e-18 Score=52.00 Aligned_cols=39 Identities=26% Similarity=0.235 Sum_probs=36.6
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|+++++|.|..|++.|.....|..|+++|+++++|.|.+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2em7_A 7 GTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSS 45 (46)
T ss_dssp SSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTC
T ss_pred CCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence 568899999999999999999999999999999999974
No 31
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.77 E-value=1.3e-18 Score=51.89 Aligned_cols=39 Identities=23% Similarity=0.277 Sum_probs=36.7
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|++++||.|..|++.|.....|..|++.|+++++|.|.+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2enc_A 7 GSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSS 45 (46)
T ss_dssp CCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCC
T ss_pred CCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCC
Confidence 578899999999999999999999999999999999974
No 32
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=99.77 E-value=1e-18 Score=52.14 Aligned_cols=39 Identities=26% Similarity=0.234 Sum_probs=36.6
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|++++||.|..|++.|.....|..|+++|+++++|.|.+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2el4_A 7 GTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSS 45 (46)
T ss_dssp SCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTT
T ss_pred CCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence 568899999999999999999999999999999999974
No 33
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=99.77 E-value=1.2e-18 Score=51.17 Aligned_cols=38 Identities=21% Similarity=0.267 Sum_probs=35.9
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCP 38 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~ 38 (39)
|+++++|.|..|++.|.....|..|+++|+++++|.|+
T Consensus 5 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 42 (42)
T 2el5_A 5 SSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG 42 (42)
T ss_dssp SSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred CCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence 57889999999999999999999999999999999995
No 34
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.77 E-value=1.3e-18 Score=51.95 Aligned_cols=39 Identities=23% Similarity=0.133 Sum_probs=36.7
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|++++||.|..|++.|.....|..|+++|+++++|.|.+
T Consensus 7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2elz_A 7 GSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSS 45 (46)
T ss_dssp CCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCC
T ss_pred CCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence 578899999999999999999999999999999999974
No 35
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=99.77 E-value=1.4e-18 Score=51.90 Aligned_cols=39 Identities=31% Similarity=0.350 Sum_probs=36.6
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|++++||.|..|++.|.....|..|+++|+++++|.|.+
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2emk_A 7 GTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSS 45 (46)
T ss_dssp CSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCC
T ss_pred cCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence 568899999999999999999999999999999999974
No 36
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.77 E-value=1.2e-18 Score=52.00 Aligned_cols=39 Identities=28% Similarity=0.307 Sum_probs=36.7
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|++++||.|..|++.|.....|..|+++|.++++|.|.+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2yu8_A 7 GTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSS 45 (46)
T ss_dssp CCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCC
T ss_pred CCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence 578899999999999999999999999999999999974
No 37
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=99.77 E-value=1.4e-18 Score=51.85 Aligned_cols=39 Identities=26% Similarity=0.210 Sum_probs=36.6
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|+++++|.|..|++.|.....|..|+++|+++++|.|.+
T Consensus 7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2el6_A 7 GAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSS 45 (46)
T ss_dssp SCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCC
T ss_pred CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence 568899999999999999999999999999999999974
No 38
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.76 E-value=1.6e-18 Score=51.72 Aligned_cols=39 Identities=26% Similarity=0.307 Sum_probs=36.6
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|++++||.|..|++.|.....|..|+++|+++++|.|.+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2ytd_A 7 GSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSS 45 (46)
T ss_dssp SCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSC
T ss_pred cCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCC
Confidence 568899999999999999999999999999999999974
No 39
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.76 E-value=1.3e-18 Score=51.90 Aligned_cols=39 Identities=23% Similarity=0.256 Sum_probs=36.6
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|++++||.|..|++.|.....|..|++.|+++++|.|.+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2eml_A 7 GTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSS 45 (46)
T ss_dssp CSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSC
T ss_pred cCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCC
Confidence 568899999999999999999999999999999999974
No 40
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.76 E-value=1e-18 Score=52.12 Aligned_cols=39 Identities=26% Similarity=0.319 Sum_probs=36.6
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|+++++|.|..|++.|.....|..|+++|.++++|.|.+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2ep1_A 7 GTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS 45 (46)
T ss_dssp CSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred CCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence 568899999999999999999999999999999999974
No 41
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.76 E-value=1.4e-18 Score=51.84 Aligned_cols=39 Identities=26% Similarity=0.304 Sum_probs=36.5
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|+++++|.|..|++.|.....|..|++.|.++++|.|..
T Consensus 7 H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2emi_A 7 GTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS 45 (46)
T ss_dssp CSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred cCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence 568899999999999999999999999999999999974
No 42
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.76 E-value=1.4e-18 Score=51.83 Aligned_cols=39 Identities=28% Similarity=0.310 Sum_probs=36.7
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|+++++|.|..|++.|.....|..|++.|+++++|.|.+
T Consensus 7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2en6_A 7 GSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSS 45 (46)
T ss_dssp CCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCC
T ss_pred cCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCC
Confidence 578899999999999999999999999999999999974
No 43
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.76 E-value=6.7e-19 Score=52.56 Aligned_cols=39 Identities=28% Similarity=0.292 Sum_probs=36.6
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|++++||.|..|++.|.....|..|+++|++++||.|.+
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2yti_A 7 GTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS 45 (46)
T ss_dssp CSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred CCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence 568899999999999999999999999999999999974
No 44
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=99.76 E-value=1.3e-18 Score=51.94 Aligned_cols=39 Identities=26% Similarity=0.291 Sum_probs=36.6
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|++++||.|..|++.|.....|..|+++|.++++|.|.+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2ema_A 7 GTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSS 45 (46)
T ss_dssp CTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSC
T ss_pred CCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence 578899999999999999999999999999999999974
No 45
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.76 E-value=1.5e-18 Score=51.78 Aligned_cols=39 Identities=28% Similarity=0.372 Sum_probs=36.6
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|++++||.|..|++.|.....|..|+++|+++++|.|..
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2yth_A 7 GSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS 45 (46)
T ss_dssp CCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred CCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence 568899999999999999999999999999999999974
No 46
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.76 E-value=1.8e-18 Score=51.55 Aligned_cols=39 Identities=15% Similarity=0.035 Sum_probs=36.6
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|++++||.|..|++.|.....|..|++.|+++++|.|.+
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2epw_A 7 GTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSS 45 (46)
T ss_dssp CCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCC
T ss_pred CCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCC
Confidence 568899999999999999999999999999999999974
No 47
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.76 E-value=9.7e-19 Score=52.23 Aligned_cols=39 Identities=33% Similarity=0.381 Sum_probs=36.6
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|++++||.|..|++.|.....|..|+++|++++||.|++
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2em6_A 7 GMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS 45 (46)
T ss_dssp CCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred cCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence 568899999999999999999999999999999999974
No 48
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.76 E-value=1e-18 Score=52.12 Aligned_cols=39 Identities=28% Similarity=0.284 Sum_probs=36.6
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|++++||.|..|++.|.....|..|+++|.++++|.|.+
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2eq0_A 7 GTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSS 45 (46)
T ss_dssp TTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSC
T ss_pred CCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence 568899999999999999999999999999999999974
No 49
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.76 E-value=1.3e-18 Score=51.94 Aligned_cols=39 Identities=26% Similarity=0.194 Sum_probs=36.6
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|++++||.|..|++.|.....|..|++.|+++++|.|.+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2emp_A 7 GTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSS 45 (46)
T ss_dssp SSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCC
T ss_pred cCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence 568899999999999999999999999999999999974
No 50
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.76 E-value=1.2e-18 Score=52.04 Aligned_cols=39 Identities=23% Similarity=0.275 Sum_probs=36.6
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|++++||.|..|++.|.....|..|+++|+++++|.|.+
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2eoo_A 7 GSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSS 45 (46)
T ss_dssp CSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSC
T ss_pred CCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCC
Confidence 568899999999999999999999999999999999974
No 51
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.76 E-value=1.1e-18 Score=51.02 Aligned_cols=37 Identities=27% Similarity=0.390 Sum_probs=35.3
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVC 37 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c 37 (39)
|++++||.|..|++.|.....|..|+++|++++||.|
T Consensus 5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C 41 (41)
T 2ept_A 5 SSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG 41 (41)
T ss_dssp CCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred cCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence 6789999999999999999999999999999999988
No 52
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.76 E-value=1.4e-18 Score=51.83 Aligned_cols=39 Identities=26% Similarity=0.307 Sum_probs=36.6
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|++++||.|..|++.|.....|..|++.|+++++|.|.+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2ep2_A 7 GTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSS 45 (46)
T ss_dssp SSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCC
T ss_pred CCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence 568899999999999999999999999999999999974
No 53
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.76 E-value=1.3e-18 Score=51.91 Aligned_cols=39 Identities=28% Similarity=0.275 Sum_probs=36.7
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|++++||.|..|++.|.....|..|+++|+++++|.|.+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2ene_A 7 GTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSS 45 (46)
T ss_dssp CCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCC
T ss_pred CCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCC
Confidence 578899999999999999999999999999999999974
No 54
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=99.76 E-value=1.4e-18 Score=51.84 Aligned_cols=39 Identities=26% Similarity=0.265 Sum_probs=36.6
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|++++||.|..|++.|.....|..|++.|+++++|.|.+
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2em0_A 7 GMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSS 45 (46)
T ss_dssp SCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSC
T ss_pred cCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCC
Confidence 568899999999999999999999999999999999974
No 55
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.76 E-value=1.3e-18 Score=51.88 Aligned_cols=39 Identities=28% Similarity=0.309 Sum_probs=36.6
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|+++++|.|..|++.|.....|..|++.|.++++|.|.+
T Consensus 7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2yrj_A 7 GTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS 45 (46)
T ss_dssp CCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred CCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence 568899999999999999999999999999999999974
No 56
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.76 E-value=1.3e-18 Score=51.87 Aligned_cols=39 Identities=28% Similarity=0.314 Sum_probs=36.6
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|++++||.|..|++.|.....|..|+++|+++++|.|.+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2eq4_A 7 GTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSS 45 (46)
T ss_dssp SSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCC
T ss_pred CCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCC
Confidence 568899999999999999999999999999999999974
No 57
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.76 E-value=1.1e-18 Score=52.11 Aligned_cols=39 Identities=26% Similarity=0.289 Sum_probs=36.6
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|+++++|.|..|++.|.....|..|++.|+++++|.|.+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2ytq_A 7 GAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSS 45 (46)
T ss_dssp SSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCC
T ss_pred cCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCC
Confidence 568899999999999999999999999999999999974
No 58
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.76 E-value=2.1e-18 Score=51.45 Aligned_cols=39 Identities=15% Similarity=0.033 Sum_probs=36.5
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|++++||.|..|++.|.....|..|++.|+++++|.|.+
T Consensus 7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2yso_A 7 GSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSS 45 (46)
T ss_dssp SSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTC
T ss_pred cCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence 568899999999999999999999999999999999974
No 59
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.76 E-value=1.7e-18 Score=51.68 Aligned_cols=39 Identities=21% Similarity=0.196 Sum_probs=36.5
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|++++||.|..|++.|.....|..|+++|+++++|.|.+
T Consensus 7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2eoq_A 7 GTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSS 45 (46)
T ss_dssp SSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCC
T ss_pred CCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence 568899999999999999999999999999999999974
No 60
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=99.76 E-value=2.1e-18 Score=51.42 Aligned_cols=39 Identities=26% Similarity=0.252 Sum_probs=36.6
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|++++||.|..|++.|.....|..|++.|.++++|.|.+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2em9_A 7 GTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSS 45 (46)
T ss_dssp CCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTC
T ss_pred CCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCC
Confidence 578899999999999999999999999999999999974
No 61
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.76 E-value=2.2e-18 Score=51.44 Aligned_cols=39 Identities=26% Similarity=0.306 Sum_probs=36.5
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|++++||.|..|++.|.....|..|+++|.++++|.|..
T Consensus 7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2enh_A 7 GTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPSS 45 (46)
T ss_dssp CCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCCC
T ss_pred cCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence 568899999999999999999999999999999999963
No 62
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.76 E-value=1.2e-18 Score=52.04 Aligned_cols=39 Identities=23% Similarity=0.302 Sum_probs=36.6
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|++++||.|..|++.|.....|..|++.|.++++|.|.+
T Consensus 7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2ytm_A 7 GTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSS 45 (46)
T ss_dssp CSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCC
T ss_pred CCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence 568899999999999999999999999999999999974
No 63
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.76 E-value=2.5e-18 Score=51.25 Aligned_cols=39 Identities=31% Similarity=0.321 Sum_probs=36.6
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|++++||.|..|++.|.....|..|++.|+++++|.|.+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2eme_A 7 GSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSS 45 (46)
T ss_dssp TCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCC
T ss_pred CCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCC
Confidence 578899999999999999999999999999999999974
No 64
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.76 E-value=2.6e-18 Score=51.20 Aligned_cols=39 Identities=23% Similarity=0.193 Sum_probs=36.5
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|++++||.|..|++.|.....|..|++.|.++++|.|.+
T Consensus 7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2eov_A 7 GTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSS 45 (46)
T ss_dssp CSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCC
T ss_pred CCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCC
Confidence 568899999999999999999999999999999999974
No 65
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.76 E-value=1.6e-18 Score=51.74 Aligned_cols=39 Identities=26% Similarity=0.280 Sum_probs=36.6
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|++++||.|..|++.|.....|..|++.|+++++|.|.+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2epz_A 7 GTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSS 45 (46)
T ss_dssp CCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCC
T ss_pred cCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCC
Confidence 568899999999999999999999999999999999974
No 66
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.76 E-value=1.9e-18 Score=51.58 Aligned_cols=39 Identities=26% Similarity=0.175 Sum_probs=36.6
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|+++++|.|..|++.|.....|..|++.|.++++|.|.+
T Consensus 7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2em8_A 7 GSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSS 45 (46)
T ss_dssp CCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCC
T ss_pred CCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCC
Confidence 568899999999999999999999999999999999974
No 67
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.76 E-value=2.2e-18 Score=51.39 Aligned_cols=39 Identities=26% Similarity=0.330 Sum_probs=36.7
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|+++++|.|..|++.|.....|..|++.|+++++|.|.+
T Consensus 7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2en1_A 7 GSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSS 45 (46)
T ss_dssp CCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCC
T ss_pred CCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence 578899999999999999999999999999999999974
No 68
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.76 E-value=2.2e-18 Score=50.52 Aligned_cols=38 Identities=16% Similarity=0.196 Sum_probs=35.8
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCP 38 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~ 38 (39)
|++++||.|..|++.|.....|..|+++|+++++|.|.
T Consensus 5 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 42 (42)
T 2yte_A 5 SSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG 42 (42)
T ss_dssp SCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred cCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence 57889999999999999999999999999999999994
No 69
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.76 E-value=2.2e-18 Score=51.44 Aligned_cols=39 Identities=26% Similarity=0.275 Sum_probs=36.5
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|++++||.|..|++.|.....|..|+++|+++++|.|+.
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2eoz_A 7 GTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS 45 (46)
T ss_dssp CSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred CCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence 568899999999999999999999999999999999973
No 70
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.76 E-value=1.4e-18 Score=51.83 Aligned_cols=39 Identities=26% Similarity=0.238 Sum_probs=36.6
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|+++++|.|..|++.|.....|..|++.|+++++|.|.+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2eq1_A 7 GTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS 45 (46)
T ss_dssp CCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred cCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence 568899999999999999999999999999999999974
No 71
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.75 E-value=1.7e-18 Score=51.65 Aligned_cols=39 Identities=23% Similarity=0.147 Sum_probs=36.6
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|++++||.|..|++.|.....|..|++.|++++||.|.+
T Consensus 7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2eop_A 7 GTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSS 45 (46)
T ss_dssp CCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCC
T ss_pred cCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence 578899999999999999999999999999999999974
No 72
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.75 E-value=2.1e-18 Score=51.48 Aligned_cols=39 Identities=21% Similarity=0.122 Sum_probs=36.6
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcC-CCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTG-EKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~-~~~~~c~~ 39 (39)
|++++||.|..|++.|.....|..|+++|++ +++|.|.+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~~ 46 (46)
T 2eoy_A 7 GQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSSG 46 (46)
T ss_dssp CCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSCC
T ss_pred cCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCCC
Confidence 5688999999999999999999999999999 99999974
No 73
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.75 E-value=2.9e-18 Score=50.74 Aligned_cols=38 Identities=16% Similarity=0.156 Sum_probs=35.9
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCP 38 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~ 38 (39)
|++++||.|..|++.|.....|..|+++|+++++|.|.
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (44)
T 2yu5_A 7 GAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG 44 (44)
T ss_dssp CSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred cCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence 56889999999999999999999999999999999995
No 74
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.75 E-value=1.9e-18 Score=51.58 Aligned_cols=38 Identities=29% Similarity=0.427 Sum_probs=36.1
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCP 38 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~ 38 (39)
|++++||.|..|++.|.....|..|+++|+++++|.|+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2eoh_A 7 GSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44 (46)
T ss_dssp CCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred cCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence 57889999999999999999999999999999999996
No 75
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=99.75 E-value=2.4e-18 Score=50.47 Aligned_cols=37 Identities=19% Similarity=0.223 Sum_probs=35.1
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVC 37 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c 37 (39)
|++++||.|..|++.|.....|..|+++|+++++|.|
T Consensus 6 H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C 42 (42)
T 2epc_A 6 SGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG 42 (42)
T ss_dssp CCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred CCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence 5688999999999999999999999999999999988
No 76
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.75 E-value=2.1e-18 Score=51.48 Aligned_cols=39 Identities=31% Similarity=0.303 Sum_probs=36.6
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|+++++|.|..|++.|.....|..|+++|.++++|.|.+
T Consensus 7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2em5_A 7 GSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSS 45 (46)
T ss_dssp CCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCC
T ss_pred CCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCC
Confidence 568899999999999999999999999999999999974
No 77
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.75 E-value=1.5e-18 Score=50.92 Aligned_cols=37 Identities=27% Similarity=0.440 Sum_probs=35.2
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVC 37 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c 37 (39)
|++++||.|..|++.|.....|..|+++|+++++|.|
T Consensus 6 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C 42 (42)
T 2en2_A 6 SGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG 42 (42)
T ss_dssp CCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred cCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence 5788999999999999999999999999999999988
No 78
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.75 E-value=2.1e-18 Score=51.42 Aligned_cols=39 Identities=23% Similarity=0.094 Sum_probs=36.5
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|++++||.|..|++.|.....|..|+++|+++++|.|.+
T Consensus 7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2en8_A 7 GSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSS 45 (46)
T ss_dssp CCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSC
T ss_pred CCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence 568899999999999999999999999999999999974
No 79
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.75 E-value=2.8e-18 Score=50.71 Aligned_cols=38 Identities=24% Similarity=0.235 Sum_probs=35.9
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCP 38 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~ 38 (39)
|+++++|.|..|++.|.....|..|+++|+++++|.|+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (44)
T 2eof_A 7 GTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG 44 (44)
T ss_dssp CSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred CCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence 56889999999999999999999999999999999995
No 80
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.75 E-value=2e-18 Score=51.49 Aligned_cols=39 Identities=28% Similarity=0.267 Sum_probs=36.6
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|+++++|.|..|++.|.....|..|++.|.++++|.|.+
T Consensus 7 h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2ep0_A 7 GTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSS 45 (46)
T ss_dssp STTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCC
T ss_pred CCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCC
Confidence 568899999999999999999999999999999999974
No 81
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.75 E-value=3.3e-18 Score=50.63 Aligned_cols=38 Identities=16% Similarity=0.186 Sum_probs=35.9
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCP 38 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~ 38 (39)
|++++||.|..|++.|.....|..|+++|+++++|.|.
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (44)
T 2emb_A 7 GHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG 44 (44)
T ss_dssp CCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred cCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence 56889999999999999999999999999999999995
No 82
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.75 E-value=1.5e-18 Score=51.80 Aligned_cols=39 Identities=28% Similarity=0.290 Sum_probs=36.6
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|++++||.|..|++.|.....|..|+++|.++++|.|.+
T Consensus 7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2ytg_A 7 GTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSS 45 (46)
T ss_dssp CSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCC
T ss_pred CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence 568899999999999999999999999999999999974
No 83
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.75 E-value=1.7e-18 Score=51.62 Aligned_cols=39 Identities=28% Similarity=0.307 Sum_probs=36.6
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|++++||.|..|++.|.....|..|+++|.++++|.|.+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2ytr_A 7 GTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSS 45 (46)
T ss_dssp CSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCC
T ss_pred CCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence 568899999999999999999999999999999999974
No 84
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.75 E-value=2.7e-18 Score=50.83 Aligned_cols=38 Identities=18% Similarity=0.136 Sum_probs=35.7
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCP 38 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~ 38 (39)
|+++++|.|..|++.|.....|..|+++|+++++|.|.
T Consensus 7 h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (44)
T 2eou_A 7 GAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG 44 (44)
T ss_dssp CSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred CCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence 56789999999999999999999999999999999995
No 85
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.75 E-value=2.6e-18 Score=51.28 Aligned_cols=38 Identities=21% Similarity=0.205 Sum_probs=36.0
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCP 38 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~ 38 (39)
|++++||.|..|++.|.....|..|+++|+++++|.|.
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2yto_A 7 GTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44 (46)
T ss_dssp CCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred cCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence 56889999999999999999999999999999999996
No 86
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.75 E-value=1.8e-18 Score=51.61 Aligned_cols=39 Identities=23% Similarity=0.215 Sum_probs=36.5
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|++++||.|..|++.|.....|..|+++|+++++|.|.+
T Consensus 7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2ysp_A 7 GTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSS 45 (46)
T ss_dssp CSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSC
T ss_pred CCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCC
Confidence 568899999999999999999999999999999999974
No 87
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=99.74 E-value=3.9e-18 Score=50.70 Aligned_cols=39 Identities=23% Similarity=0.347 Sum_probs=36.7
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|++++||.|..|++.|.....|..|+++|+++++|.|++
T Consensus 5 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~ 43 (45)
T 2epq_A 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPS 43 (45)
T ss_dssp CSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCC
T ss_pred cCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcC
Confidence 678999999999999999999999999999999999974
No 88
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.74 E-value=2.2e-18 Score=50.96 Aligned_cols=38 Identities=24% Similarity=0.203 Sum_probs=35.8
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCP 38 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~ 38 (39)
|++++||.|..|++.|.....|..|++.|+++++|.|+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (44)
T 2en7_A 7 GTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG 44 (44)
T ss_dssp SSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred CCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence 56889999999999999999999999999999999995
No 89
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.74 E-value=3.2e-18 Score=51.16 Aligned_cols=39 Identities=28% Similarity=0.370 Sum_probs=36.5
Q ss_pred CCCCcceeccccccccccchhHHHHhH-HhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIR-RHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~-~~~~~~~~~c~~ 39 (39)
|++++||.|..|++.|.....|..|++ .|+++++|.|.+
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~ 46 (47)
T 2epx_A 7 GTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSS 46 (47)
T ss_dssp CCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCC
T ss_pred cCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCC
Confidence 578899999999999999999999999 999999999974
No 90
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.74 E-value=2.5e-18 Score=50.49 Aligned_cols=37 Identities=24% Similarity=0.401 Sum_probs=35.1
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVC 37 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c 37 (39)
|++++||.|..|++.|.....|..|++.|+++++|.|
T Consensus 6 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C 42 (42)
T 2eos_A 6 SGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG 42 (42)
T ss_dssp CSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred cCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence 5688999999999999999999999999999999988
No 91
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.74 E-value=1.7e-18 Score=51.71 Aligned_cols=39 Identities=21% Similarity=0.205 Sum_probs=36.5
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|++++||.|..|++.|.....|..|+++|+++++|.|..
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2emz_A 7 GSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPSS 45 (46)
T ss_dssp SSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSCC
T ss_pred CCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence 568899999999999999999999999999999999974
No 92
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.74 E-value=2.2e-18 Score=50.97 Aligned_cols=38 Identities=16% Similarity=0.225 Sum_probs=35.9
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCP 38 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~ 38 (39)
|++++||.|..|++.|.....|..|+++|.++++|.|+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (44)
T 2eoj_A 7 GTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG 44 (44)
T ss_dssp SSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred cCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence 56889999999999999999999999999999999995
No 93
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.74 E-value=1.4e-18 Score=51.84 Aligned_cols=39 Identities=26% Similarity=0.219 Sum_probs=36.6
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|+++++|.|..|++.|.....|..|+++|.++++|.|.+
T Consensus 7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2ytt_A 7 GEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSS 45 (46)
T ss_dssp CSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCC
T ss_pred CCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence 568899999999999999999999999999999999974
No 94
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.73 E-value=3.8e-18 Score=50.48 Aligned_cols=38 Identities=18% Similarity=0.150 Sum_probs=35.9
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCP 38 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~ 38 (39)
|++++||.|..|++.|.....|..|+++|+++++|.|.
T Consensus 7 H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~ 44 (44)
T 2eox_A 7 GTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG 44 (44)
T ss_dssp CCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred CCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence 57889999999999999999999999999999999994
No 95
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.73 E-value=2.3e-18 Score=50.49 Aligned_cols=37 Identities=30% Similarity=0.383 Sum_probs=35.1
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVC 37 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c 37 (39)
|++++||.|..|++.|.....|..|+++|+++++|.|
T Consensus 6 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C 42 (42)
T 2ytb_A 6 SGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG 42 (42)
T ss_dssp CCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred cCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence 5788999999999999999999999999999999988
No 96
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.73 E-value=5.4e-18 Score=50.50 Aligned_cols=38 Identities=24% Similarity=0.249 Sum_probs=36.0
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCP 38 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~ 38 (39)
|++++||.|..|++.|.....|..|++.|.++++|.|.
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2eq3_A 7 GTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44 (46)
T ss_dssp SCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred CCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence 56889999999999999999999999999999999996
No 97
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.73 E-value=4.1e-18 Score=50.82 Aligned_cols=38 Identities=18% Similarity=0.200 Sum_probs=35.9
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCP 38 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~ 38 (39)
|++++||.|..|++.|.....|..|+++|.++++|.|.
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~ 44 (46)
T 2en3_A 7 GTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS 44 (46)
T ss_dssp SCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred cCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence 56889999999999999999999999999999999995
No 98
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=99.72 E-value=1.2e-17 Score=50.19 Aligned_cols=39 Identities=26% Similarity=0.329 Sum_probs=36.0
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|.++++|.|..|++.|.....|..|+++|+++++|.|.+
T Consensus 7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (48)
T 2epr_A 7 GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGP 45 (48)
T ss_dssp CCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCC
T ss_pred CCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCC
Confidence 457889999999999999999999999999999999974
No 99
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.71 E-value=2.5e-17 Score=48.74 Aligned_cols=38 Identities=18% Similarity=0.142 Sum_probs=35.5
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCP 38 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~ 38 (39)
|++++||.|..|++.|.....|..|+++|+++++|.|.
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~g 44 (44)
T 2epv_A 7 GSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSSG 44 (44)
T ss_dssp CCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCCC
T ss_pred cCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCCC
Confidence 57889999999999999999999999999999999873
No 100
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=99.71 E-value=2e-17 Score=47.92 Aligned_cols=38 Identities=16% Similarity=0.329 Sum_probs=35.0
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCP 38 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~ 38 (39)
|++++||.|..|++.|.....|..|+++|+++++|.+.
T Consensus 1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~~ 38 (39)
T 1njq_A 1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRL 38 (39)
T ss_dssp -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTTC
T ss_pred CCCCCceECCCCCcccCCHHHHHHHHHHcCCCccceec
Confidence 67899999999999999999999999999999999874
No 101
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.70 E-value=3.5e-17 Score=49.04 Aligned_cols=39 Identities=26% Similarity=0.351 Sum_probs=36.2
Q ss_pred CCCCcceecc--ccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACL--WCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~--~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|+++++|.|. .|++.|.....|..|+++|+++++|.|.+
T Consensus 7 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 47 (48)
T 2ent_A 7 GTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSS 47 (48)
T ss_dssp SCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCC
T ss_pred cCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCC
Confidence 5688999998 89999999999999999999999999974
No 102
>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=99.67 E-value=1e-16 Score=51.64 Aligned_cols=37 Identities=19% Similarity=0.289 Sum_probs=33.8
Q ss_pred CCCcceeccc--cccccccchhHHHHh-HHhcCCCCccCC
Q psy4412 2 DPTYLYACLW--CDYHTLNSGHMRDHI-RRHTGEKPFVCP 38 (39)
Q Consensus 2 ~~~~~~~c~~--c~~~~~~~~~~~~~~-~~~~~~~~~~c~ 38 (39)
++++||.|.. |+++|.....|..|+ ++|++++|+.|.
T Consensus 23 sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~ 62 (73)
T 1x3c_A 23 SPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSA 62 (73)
T ss_dssp CSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCC
T ss_pred cCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccc
Confidence 5899999976 999999999999997 799999999874
No 103
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=99.66 E-value=2.2e-16 Score=48.42 Aligned_cols=39 Identities=28% Similarity=0.515 Sum_probs=35.5
Q ss_pred CCCCcceeccccccccccchhHHHHhH-HhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIR-RHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~-~~~~~~~~~c~~ 39 (39)
|++++||.|..|++.|.....|..|++ +|.++++|.|.+
T Consensus 7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~ 46 (54)
T 2eps_A 7 GSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 46 (54)
T ss_dssp CCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred CCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCC
Confidence 457899999999999999999999997 999999999964
No 104
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.64 E-value=5e-16 Score=49.72 Aligned_cols=39 Identities=33% Similarity=0.532 Sum_probs=36.1
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|+++++|.|..|++.|.....|..|++.|.++++|.|.+
T Consensus 9 H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~ 47 (72)
T 1x6e_A 9 HSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLE 47 (72)
T ss_dssp TTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSS
T ss_pred cCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCC
Confidence 568899999999999999999999999999999999964
No 105
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=99.63 E-value=6.1e-16 Score=51.24 Aligned_cols=38 Identities=18% Similarity=0.364 Sum_probs=34.4
Q ss_pred CCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 2 DPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 2 ~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
...+++.|..|++.|.....|..|+++|++++||.|.+
T Consensus 24 ~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~ 61 (85)
T 2lv2_A 24 ASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKY 61 (85)
T ss_dssp CCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTT
T ss_pred CCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCC
Confidence 34678999999999999999999999999999999964
No 106
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.63 E-value=8.3e-16 Score=48.95 Aligned_cols=39 Identities=26% Similarity=0.507 Sum_probs=35.2
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|+++++|.|..|++.|.....|..|++.|.++++|.|.+
T Consensus 4 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 42 (70)
T 1x5w_A 4 GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNY 42 (70)
T ss_dssp CCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSS
T ss_pred CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCC
Confidence 467889999999999999999999999999999999864
No 107
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=99.62 E-value=2e-16 Score=55.57 Aligned_cols=37 Identities=27% Similarity=0.549 Sum_probs=26.5
Q ss_pred CCCcceeccccccccccchhHHHHhHHhcCCCCccCC
Q psy4412 2 DPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCP 38 (39)
Q Consensus 2 ~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~ 38 (39)
.|+++|.|..|++.|.....|..|+++|+++++|.|.
T Consensus 18 ~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~ 54 (133)
T 2lt7_A 18 DGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCR 54 (133)
T ss_dssp TTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECS
T ss_pred CCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCC
Confidence 4666777777777777777777777777777777765
No 108
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.61 E-value=1.4e-15 Score=42.86 Aligned_cols=34 Identities=26% Similarity=0.411 Sum_probs=31.6
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKP 34 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~ 34 (39)
|++++||.|..|++.|.....|..|++.|.+++|
T Consensus 2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp 35 (35)
T 2elx_A 2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ 35 (35)
T ss_dssp CCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred CCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence 6789999999999999999999999999998875
No 109
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.61 E-value=1.2e-15 Score=43.56 Aligned_cols=34 Identities=18% Similarity=0.333 Sum_probs=31.7
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKP 34 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~ 34 (39)
|++++||.|..|++.|.....|..|++.|++++|
T Consensus 4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp 37 (37)
T 2elo_A 4 GSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS 37 (37)
T ss_dssp CCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred CCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence 6789999999999999999999999999999875
No 110
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=99.61 E-value=6.1e-16 Score=47.37 Aligned_cols=36 Identities=22% Similarity=0.230 Sum_probs=33.3
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCcc
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFV 36 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~ 36 (39)
|++++||.|..|++.|.....|..|+++|++++||.
T Consensus 19 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~ 54 (54)
T 1yui_A 19 SQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPGV 54 (54)
T ss_dssp HTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred cCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence 467899999999999999999999999999999874
No 111
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.61 E-value=1e-15 Score=49.44 Aligned_cols=35 Identities=29% Similarity=0.417 Sum_probs=17.8
Q ss_pred CCcceeccccccccccchhHHHHhHHhcCCCCccC
Q psy4412 3 PTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVC 37 (39)
Q Consensus 3 ~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c 37 (39)
++++|.|..|++.|.....|..|+++|++++||.|
T Consensus 43 ~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C 77 (77)
T 2cot_A 43 GEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG 77 (77)
T ss_dssp CSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred CCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence 34445555555555555555555555555555544
No 112
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=99.61 E-value=1.7e-15 Score=42.77 Aligned_cols=34 Identities=15% Similarity=0.240 Sum_probs=31.6
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKP 34 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~ 34 (39)
|++++||.|..|++.|.....|..|++.|++++|
T Consensus 2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~ 35 (35)
T 1srk_A 2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS 35 (35)
T ss_dssp CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence 6789999999999999999999999999998875
No 113
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.59 E-value=1e-15 Score=49.53 Aligned_cols=39 Identities=21% Similarity=0.425 Sum_probs=35.5
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcC---CCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTG---EKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~---~~~~~c~~ 39 (39)
|++++||.|..|++.|.....|..|++.|.+ +++|.|.+
T Consensus 2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~ 43 (78)
T 2d9h_A 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEF 43 (78)
T ss_dssp CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTT
T ss_pred CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCC
Confidence 6789999999999999999999999999986 89999864
No 114
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=99.59 E-value=1.2e-15 Score=46.92 Aligned_cols=37 Identities=32% Similarity=0.646 Sum_probs=31.3
Q ss_pred CCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 3 PTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 3 ~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|++||.|..|++.|.....|..|++.|.++++|.|.+
T Consensus 1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~ 37 (57)
T 3uk3_C 1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEF 37 (57)
T ss_dssp ----CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSS
T ss_pred CCCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCC
Confidence 4689999999999999999999999999999999863
No 115
>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=99.59 E-value=2.2e-15 Score=43.22 Aligned_cols=36 Identities=22% Similarity=0.341 Sum_probs=33.2
Q ss_pred CCCCcceecc--ccccccccchhHHHHhHHhcCCCCcc
Q psy4412 1 MDPTYLYACL--WCDYHTLNSGHMRDHIRRHTGEKPFV 36 (39)
Q Consensus 1 h~~~~~~~c~--~c~~~~~~~~~~~~~~~~~~~~~~~~ 36 (39)
|++++||.|. .|++.|.....|..|++.|+++++|.
T Consensus 1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~ 38 (38)
T 1bhi_A 1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKFG 38 (38)
T ss_dssp CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTTC
T ss_pred CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence 6789999999 59999999999999999999999873
No 116
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.58 E-value=5.7e-16 Score=52.66 Aligned_cols=36 Identities=25% Similarity=0.571 Sum_probs=25.0
Q ss_pred CCcceeccccccccccchhHHHH-hHHhcCCCCccCC
Q psy4412 3 PTYLYACLWCDYHTLNSGHMRDH-IRRHTGEKPFVCP 38 (39)
Q Consensus 3 ~~~~~~c~~c~~~~~~~~~~~~~-~~~~~~~~~~~c~ 38 (39)
+++||.|..|++.|.....|..| +++|++++||.|.
T Consensus 47 ~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~ 83 (102)
T 2ghf_A 47 LNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLT 83 (102)
T ss_dssp CSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEE
T ss_pred CCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCC
Confidence 45667777777777777777777 6677777777664
No 117
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=99.57 E-value=9e-16 Score=48.18 Aligned_cols=33 Identities=12% Similarity=0.168 Sum_probs=30.3
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEK 33 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~ 33 (39)
|++++||.|..|+++|.....|..|+++|++++
T Consensus 27 Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep 59 (60)
T 4gzn_C 27 HLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP 59 (60)
T ss_dssp HHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred hCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence 568999999999999999999999999999875
No 118
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=99.57 E-value=7.5e-15 Score=47.11 Aligned_cols=38 Identities=32% Similarity=0.618 Sum_probs=32.0
Q ss_pred CCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 2 DPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 2 ~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
.++++|.|..|++.|.....|..|++.|.++++|.|.+
T Consensus 13 ~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~ 50 (74)
T 2lce_A 13 HSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNI 50 (74)
T ss_dssp CCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTT
T ss_pred CCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCC
Confidence 46778889999998888888888888888888888863
No 119
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=99.57 E-value=4.1e-15 Score=41.68 Aligned_cols=33 Identities=27% Similarity=0.368 Sum_probs=30.5
Q ss_pred cceeccccccccccchhHHHHhHHhcCCCCccC
Q psy4412 5 YLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVC 37 (39)
Q Consensus 5 ~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c 37 (39)
+||.|..|++.|.....|..|+++|+++++|.+
T Consensus 1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~r 33 (33)
T 1rim_A 1 YKFACPECPKRFMRSDHLSKHITLHELLGEERR 33 (33)
T ss_dssp CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCCC
T ss_pred CcccCCCCCchhCCHHHHHHHHHHhCCCCCCCC
Confidence 579999999999999999999999999999853
No 120
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=99.56 E-value=1.1e-15 Score=53.68 Aligned_cols=38 Identities=24% Similarity=0.400 Sum_probs=29.9
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCP 38 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~ 38 (39)
|++++||.|..|++.|.....|..|+++|+++++|.|.
T Consensus 45 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~ 82 (133)
T 2lt7_A 45 HSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCL 82 (133)
T ss_dssp HHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEES
T ss_pred cCCCCCeeCCccCeecccccchhhhccccCCCccccCC
Confidence 34677888888888888888888888888888888775
No 121
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=99.55 E-value=2.5e-15 Score=47.33 Aligned_cols=39 Identities=23% Similarity=0.457 Sum_probs=34.5
Q ss_pred CCCCcceeccccccccccchhHHHHhHH-h-cCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRR-H-TGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~-~-~~~~~~~c~~ 39 (39)
|++++||.|..|++.|.....|..|++. | .++++|.|.+
T Consensus 5 h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~ 45 (66)
T 2drp_A 5 KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPF 45 (66)
T ss_dssp EEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTT
T ss_pred cCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCC
Confidence 4578999999999999999999999988 6 5899999863
No 122
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.54 E-value=5.5e-15 Score=47.76 Aligned_cols=39 Identities=18% Similarity=0.510 Sum_probs=30.3
Q ss_pred CCCCcceeccc--cccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLW--CDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~--c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|+++++|.|.. |++.|.....|..|+++|.++++|.|.+
T Consensus 33 H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 73 (79)
T 2dlk_A 33 HIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF 73 (79)
T ss_dssp GGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCS
T ss_pred hCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCC
Confidence 34667788887 8888888888888888888888887753
No 123
>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.54 E-value=1.7e-14 Score=41.85 Aligned_cols=32 Identities=28% Similarity=0.496 Sum_probs=29.3
Q ss_pred CCCCcceeccc--cccccccchhHHHHhHHhcCC
Q psy4412 1 MDPTYLYACLW--CDYHTLNSGHMRDHIRRHTGE 32 (39)
Q Consensus 1 h~~~~~~~c~~--c~~~~~~~~~~~~~~~~~~~~ 32 (39)
+++++||.|.. |+++|.....|..|+++|+++
T Consensus 4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~ 37 (38)
T 2eln_A 4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL 37 (38)
T ss_dssp SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence 46889999986 999999999999999999886
No 124
>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=99.54 E-value=8.9e-16 Score=51.06 Aligned_cols=38 Identities=18% Similarity=0.292 Sum_probs=35.4
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCP 38 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~ 38 (39)
|++++||.|..|++.|.....|..|+++|++++||.|.
T Consensus 20 H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~ 57 (88)
T 1x6f_A 20 RLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAK 57 (88)
T ss_dssp CCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCC
T ss_pred cCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccc
Confidence 56789999999999999999999999999999999985
No 125
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.53 E-value=2e-14 Score=40.63 Aligned_cols=33 Identities=33% Similarity=0.631 Sum_probs=30.2
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEK 33 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~ 33 (39)
|++++||.|..|++.|.....|..|+++|++++
T Consensus 4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k 36 (36)
T 2elt_A 4 GSSGKPYKCPQCSYASAIKANLNVHLRKHTGEK 36 (36)
T ss_dssp SCCCCSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred CCCCCCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence 578899999999999999999999999998864
No 126
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.53 E-value=1.5e-14 Score=46.65 Aligned_cols=38 Identities=34% Similarity=0.578 Sum_probs=35.0
Q ss_pred CCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 2 DPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 2 ~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
.++++|.|..|++.|.....|..|++.|.++++|.|.+
T Consensus 14 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~ 51 (77)
T 2cot_A 14 RERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDE 51 (77)
T ss_dssp CCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSS
T ss_pred CCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCC
Confidence 46789999999999999999999999999999999964
No 127
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.52 E-value=2.5e-14 Score=40.71 Aligned_cols=33 Identities=24% Similarity=0.544 Sum_probs=30.1
Q ss_pred CCCCcceeccccccccccc-hhHHHHhHHhcCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNS-GHMRDHIRRHTGEK 33 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~-~~~~~~~~~~~~~~ 33 (39)
|++++||.|..|++.|... ..|..|+++|++++
T Consensus 4 h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k 37 (37)
T 2elp_A 4 GSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK 37 (37)
T ss_dssp CCCCCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred CCCCCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence 5788999999999999999 99999999998764
No 128
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.52 E-value=2.3e-14 Score=40.57 Aligned_cols=33 Identities=27% Similarity=0.620 Sum_probs=30.1
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEK 33 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~ 33 (39)
|++++||.|..|++.|.....|..|++.|++++
T Consensus 4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k 36 (36)
T 2elq_A 4 GSSGKPFKCSLCEYATRSKSNLKAHMNRHSTEK 36 (36)
T ss_dssp SCCCCSEECSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred CCCCCCccCCCCCchhCCHHHHHHHHHHhccCC
Confidence 578899999999999999999999999998764
No 129
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.52 E-value=1.8e-14 Score=40.82 Aligned_cols=33 Identities=21% Similarity=0.295 Sum_probs=30.0
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEK 33 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~ 33 (39)
|++++||.|..|++.|.....|..|+++|++++
T Consensus 4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k 36 (36)
T 2elv_A 4 GSSGLLYDCHICERKFKNELDRDRHMLVHGDKW 36 (36)
T ss_dssp SCCCCCEECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred CCCCCCeECCCCCCccCCHHHHHHHHHHhcCCC
Confidence 568899999999999999999999999998764
No 130
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.52 E-value=1.6e-14 Score=47.94 Aligned_cols=33 Identities=27% Similarity=0.185 Sum_probs=30.9
Q ss_pred eeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 7 YACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 7 ~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|.|..|++.|.....|..|+++|+++++|.|..
T Consensus 63 ~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 95 (95)
T 2ej4_A 63 EECPREGKSFKAKYKLVNHIRVHTGEKSGPSSG 95 (95)
T ss_dssp TTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSCC
T ss_pred cCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence 899999999999999999999999999999963
No 131
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.52 E-value=3.3e-14 Score=40.18 Aligned_cols=33 Identities=18% Similarity=0.256 Sum_probs=30.2
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEK 33 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~ 33 (39)
|+++++|.|..|++.|.....|..|+++|++++
T Consensus 4 h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek 36 (36)
T 2elr_A 4 GSSGKTHLCDMCGKKFKSKGTLKSHKLLHTADG 36 (36)
T ss_dssp CCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred CCCCCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence 568899999999999999999999999998874
No 132
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.50 E-value=5.1e-14 Score=45.43 Aligned_cols=39 Identities=33% Similarity=0.622 Sum_probs=33.8
Q ss_pred CCCCcceeccccccccccchhHHHHhH-HhcCC-CCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIR-RHTGE-KPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~-~~~~~-~~~~c~~ 39 (39)
|++++||.|..|++.|.....|..|++ .|.++ ++|.|.+
T Consensus 10 H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~ 50 (77)
T 2ct1_A 10 HSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPH 50 (77)
T ss_dssp CSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSS
T ss_pred cCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCC
Confidence 568899999999999999999999997 67764 8999863
No 133
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=99.49 E-value=2.4e-14 Score=42.98 Aligned_cols=33 Identities=27% Similarity=0.348 Sum_probs=29.4
Q ss_pred CCCCcceeccccccccccchhHHHHhH-HhcCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIR-RHTGEK 33 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~-~~~~~~ 33 (39)
|++++||.|..|++.|.....|..|++ +|+++.
T Consensus 2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~ 35 (48)
T 3iuf_A 2 EDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEE 35 (48)
T ss_dssp CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC--
T ss_pred CCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCC
Confidence 688999999999999999999999999 898764
No 134
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.49 E-value=6.4e-14 Score=39.63 Aligned_cols=33 Identities=24% Similarity=0.476 Sum_probs=29.9
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEK 33 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~ 33 (39)
|++++||.|..|++.|.....|..|+++|++++
T Consensus 4 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k 36 (36)
T 2els_A 4 GSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK 36 (36)
T ss_dssp TSCCCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred CCCCCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence 467899999999999999999999999998864
No 135
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=99.49 E-value=3.6e-14 Score=43.92 Aligned_cols=35 Identities=31% Similarity=0.687 Sum_probs=30.6
Q ss_pred cceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 5 YLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 5 ~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
+||.|..|++.|.....|..|++.|.++++|.|.+
T Consensus 1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~ 35 (60)
T 2adr_A 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGL 35 (60)
T ss_dssp CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTT
T ss_pred CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCC
Confidence 47889999999999999999999999999998863
No 136
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=99.49 E-value=1.8e-14 Score=41.41 Aligned_cols=31 Identities=16% Similarity=0.422 Sum_probs=27.1
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCP 38 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~ 38 (39)
+.+++||.|..|+++|...+.|..|+ ||.|.
T Consensus 3 ~~gekp~~C~~CgK~F~~~s~L~~H~-------py~C~ 33 (36)
T 1fv5_A 3 LLKPARFMCLPCGIAFSSPSTLEAHQ-------AYYCS 33 (36)
T ss_dssp SSSCCCCEETTTTEECSCHHHHHHHH-------HHTST
T ss_pred CCCccCeECCCCCCccCCHhHccCcC-------CeECc
Confidence 35899999999999999999999997 66664
No 137
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=99.48 E-value=3.4e-14 Score=45.57 Aligned_cols=35 Identities=29% Similarity=0.582 Sum_probs=32.4
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCc
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPF 35 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~ 35 (39)
|+++++|.|..|++.|.....|..|++.|++++||
T Consensus 40 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~ 74 (74)
T 2lce_A 40 HTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY 74 (74)
T ss_dssp HCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred cCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence 45788999999999999999999999999999986
No 138
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=99.48 E-value=6.5e-14 Score=39.79 Aligned_cols=32 Identities=25% Similarity=0.290 Sum_probs=29.2
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGE 32 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~ 32 (39)
|++++||.|..|++.|.....|..|++.|.++
T Consensus 6 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~ 37 (37)
T 1p7a_A 6 STGIKPFQCPDCDRSFSRSDHLALHRKRHMLV 37 (37)
T ss_dssp TCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred CCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence 57889999999999999999999999998764
No 139
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.47 E-value=1.5e-14 Score=48.62 Aligned_cols=36 Identities=14% Similarity=0.289 Sum_probs=29.6
Q ss_pred CCcceecccccccc-ccchhHHHHhHHhcCCCCccCCC
Q psy4412 3 PTYLYACLWCDYHT-LNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 3 ~~~~~~c~~c~~~~-~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
++++|.|..|++.| .....|..|++.| ++++|.|.+
T Consensus 31 ~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~ 67 (96)
T 2ctd_A 31 DKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHH 67 (96)
T ss_dssp HTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSS
T ss_pred CCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCC
Confidence 45678888888888 8888888888888 888888853
No 140
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.47 E-value=6.5e-15 Score=49.43 Aligned_cols=38 Identities=13% Similarity=0.249 Sum_probs=30.1
Q ss_pred CCCCcceeccccccccc-cchhHHHHhHHhcC-CCCccCC
Q psy4412 1 MDPTYLYACLWCDYHTL-NSGHMRDHIRRHTG-EKPFVCP 38 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~-~~~~~~~~~~~~~~-~~~~~c~ 38 (39)
|+++++|.|..|++.|. ....|..|++.|.+ +++|.|.
T Consensus 19 h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~ 58 (98)
T 2gqj_A 19 IHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQ 58 (98)
T ss_dssp TTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCS
T ss_pred hccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECC
Confidence 45677888888888888 88888888888877 7788775
No 141
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.47 E-value=7.3e-14 Score=39.84 Aligned_cols=32 Identities=25% Similarity=0.610 Sum_probs=29.2
Q ss_pred CCCCcceeccccccccccchhHHHH-hHHhcCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDH-IRRHTGE 32 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~-~~~~~~~ 32 (39)
|++++||.|..|++.|.....|..| ++.|+++
T Consensus 4 H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~ 36 (37)
T 2elm_A 4 GSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI 36 (37)
T ss_dssp SSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred cCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence 6789999999999999999999999 8888764
No 142
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=99.46 E-value=2.2e-14 Score=44.94 Aligned_cols=36 Identities=14% Similarity=0.212 Sum_probs=31.5
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
|++++||.|..|++.|.....|. +.|+++++|.|.+
T Consensus 9 H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~ 44 (62)
T 1vd4_A 9 STNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTF 44 (62)
T ss_dssp CCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSS
T ss_pred cCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCC
Confidence 57899999999999999887776 7899999999963
No 143
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=99.46 E-value=1.6e-13 Score=43.79 Aligned_cols=39 Identities=41% Similarity=0.724 Sum_probs=35.0
Q ss_pred CCCCcceecc--ccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 1 MDPTYLYACL--WCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~--~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
+.++++|.|. .|++.|.....|..|++.|.++++|.|.+
T Consensus 14 ~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~ 54 (73)
T 1f2i_G 14 VPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRI 54 (73)
T ss_dssp CCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTT
T ss_pred CCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCC
Confidence 3578899997 59999999999999999999999999964
No 144
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=99.45 E-value=1.3e-13 Score=42.27 Aligned_cols=33 Identities=30% Similarity=0.683 Sum_probs=25.7
Q ss_pred ceeccccccccccchhHHHHhHHhcCCCCccCC
Q psy4412 6 LYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCP 38 (39)
Q Consensus 6 ~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~ 38 (39)
||.|..|++.|.....|..|++.|.++++|.|.
T Consensus 1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~ 33 (57)
T 1bbo_A 1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCT 33 (57)
T ss_dssp CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECS
T ss_pred CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCC
Confidence 567778888888878888888888887777775
No 145
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=99.45 E-value=1.1e-13 Score=45.50 Aligned_cols=36 Identities=42% Similarity=0.788 Sum_probs=32.7
Q ss_pred CcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 4 TYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 4 ~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
++||.|..|++.|.....|..|++.|.++++|.|.+
T Consensus 1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 36 (88)
T 1llm_C 1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDI 36 (88)
T ss_dssp CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTT
T ss_pred CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCC
Confidence 478999999999999999999999999999999863
No 146
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.45 E-value=1.3e-13 Score=46.89 Aligned_cols=38 Identities=21% Similarity=0.458 Sum_probs=33.5
Q ss_pred CCCcceeccccccccccchhHHHHhH-Hh---cCCCCccCCC
Q psy4412 2 DPTYLYACLWCDYHTLNSGHMRDHIR-RH---TGEKPFVCPF 39 (39)
Q Consensus 2 ~~~~~~~c~~c~~~~~~~~~~~~~~~-~~---~~~~~~~c~~ 39 (39)
+|++||.|..|++.|.....|..|++ .| .++++|.|.+
T Consensus 14 ~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~ 55 (102)
T 2ghf_A 14 KVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVE 55 (102)
T ss_dssp CCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETT
T ss_pred CCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCC
Confidence 47889999999999999999999997 58 5689999863
No 147
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}
Probab=99.44 E-value=1.5e-13 Score=39.17 Aligned_cols=33 Identities=30% Similarity=0.471 Sum_probs=29.7
Q ss_pred CCCCcceecc--ccccccccchhHHHHhHHhcCCC
Q psy4412 1 MDPTYLYACL--WCDYHTLNSGHMRDHIRRHTGEK 33 (39)
Q Consensus 1 h~~~~~~~c~--~c~~~~~~~~~~~~~~~~~~~~~ 33 (39)
|++++||.|. .|++.|.....|..|+++|++++
T Consensus 3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek 37 (37)
T 1va1_A 3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER 37 (37)
T ss_dssp SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence 5788999999 49999999999999999998864
No 148
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.43 E-value=3.5e-13 Score=45.67 Aligned_cols=37 Identities=24% Similarity=0.539 Sum_probs=20.5
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCP 38 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~ 38 (39)
|+++++|.| .|++.|.....|..|++.|.++++|.|.
T Consensus 5 h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~ 41 (110)
T 2csh_A 5 SSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCG 41 (110)
T ss_dssp CCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECT
T ss_pred CCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCC
Confidence 344555555 5555555555555555555555555553
No 149
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=99.43 E-value=3.1e-13 Score=44.84 Aligned_cols=36 Identities=36% Similarity=0.808 Sum_probs=20.0
Q ss_pred CCcceeccccccccccchhHHHHhHHhcCCCCccCC
Q psy4412 3 PTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCP 38 (39)
Q Consensus 3 ~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~ 38 (39)
++++|.|..|++.|.....|..|++.|.++++|.|.
T Consensus 33 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~ 68 (96)
T 2dmd_A 33 GVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQ 68 (96)
T ss_dssp CCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECS
T ss_pred CCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCC
Confidence 444555555555555555555555555555555553
No 150
>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=99.42 E-value=3.5e-13 Score=42.96 Aligned_cols=33 Identities=15% Similarity=0.311 Sum_probs=30.1
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEK 33 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~ 33 (39)
+.+++||.|..|++.|.....|..|+++|+++.
T Consensus 8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~ 40 (66)
T 2epp_A 8 LREAGILPCGLCGKVFTDANRLRQHEAQHGVTS 40 (66)
T ss_dssp CCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS
T ss_pred CCCccCcCCCCCCCccCCHHHHHhhhhhhCCCc
Confidence 457899999999999999999999999999864
No 151
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=99.41 E-value=6.8e-13 Score=42.26 Aligned_cols=36 Identities=39% Similarity=0.754 Sum_probs=33.4
Q ss_pred CCcceeccc--cccccccchhHHHHhHHhcCCCCccCC
Q psy4412 3 PTYLYACLW--CDYHTLNSGHMRDHIRRHTGEKPFVCP 38 (39)
Q Consensus 3 ~~~~~~c~~--c~~~~~~~~~~~~~~~~~~~~~~~~c~ 38 (39)
..++|.|.. |++.|.....|..|++.|.++++|.|.
T Consensus 14 ~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 51 (72)
T 2epa_A 14 RIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCS 51 (72)
T ss_dssp CCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECC
T ss_pred ccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCC
Confidence 567899988 999999999999999999999999995
No 152
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=99.41 E-value=2.5e-13 Score=45.77 Aligned_cols=33 Identities=39% Similarity=0.711 Sum_probs=14.4
Q ss_pred cceeccccccccccchhHHHHhHHhcCCCCccC
Q psy4412 5 YLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVC 37 (39)
Q Consensus 5 ~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c 37 (39)
++|.|..|++.|.....|..|++.|.++++|.|
T Consensus 44 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C 76 (106)
T 2ee8_A 44 RPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKC 76 (106)
T ss_dssp CCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSC
T ss_pred CCcCCCCccchhCCHHHHHHHHHHhCCCCCeEC
Confidence 344444444444444444444444444444444
No 153
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=99.40 E-value=1.4e-13 Score=44.53 Aligned_cols=38 Identities=34% Similarity=0.652 Sum_probs=32.0
Q ss_pred CCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 2 DPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 2 ~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
.++++|.|..|++.|.....|..|++.|.++++|.|.+
T Consensus 25 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~ 62 (82)
T 2kmk_A 25 SDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQV 62 (82)
T ss_dssp HTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTT
T ss_pred CCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCC
Confidence 35678889999999988888999999998888888863
No 154
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=99.40 E-value=1.6e-13 Score=45.09 Aligned_cols=36 Identities=42% Similarity=0.769 Sum_probs=24.9
Q ss_pred CCcceeccccccccccchhHHHHhHHhcCCCCccCC
Q psy4412 3 PTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCP 38 (39)
Q Consensus 3 ~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~ 38 (39)
++++|.|..|++.|.....|..|++.|.++++|.|.
T Consensus 31 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~ 66 (90)
T 1a1h_A 31 GQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACD 66 (90)
T ss_dssp CCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECT
T ss_pred CCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCC
Confidence 455677777777777777777777777777777664
No 155
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.39 E-value=8.5e-13 Score=43.02 Aligned_cols=38 Identities=26% Similarity=0.456 Sum_probs=22.1
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCC----CCccCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGE----KPFVCP 38 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~----~~~~c~ 38 (39)
|+++++|.|..|++.|.....|..|++.+... ++|.|.
T Consensus 10 H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~ 51 (86)
T 1x6h_A 10 HTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCS 51 (86)
T ss_dssp CCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECS
T ss_pred ecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECC
Confidence 34556666666666666666666666554443 456554
No 156
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=99.39 E-value=1e-12 Score=43.50 Aligned_cols=35 Identities=31% Similarity=0.537 Sum_probs=16.7
Q ss_pred CCcceeccccccccccchhHHHHhHHhcCCCCccC
Q psy4412 3 PTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVC 37 (39)
Q Consensus 3 ~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c 37 (39)
++++|.|..|++.|.....|..|++.|.++++|.|
T Consensus 4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C 38 (95)
T 2yt9_A 4 GSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSC 38 (95)
T ss_dssp CCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEEC
T ss_pred CCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcC
Confidence 34444444444444444444444444444444444
No 157
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=99.39 E-value=8.7e-13 Score=45.25 Aligned_cols=38 Identities=26% Similarity=0.543 Sum_probs=32.4
Q ss_pred CCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 2 DPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 2 ~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
.++++|.|..|++.|.....|..|++.|.++++|.|.+
T Consensus 62 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~ 99 (124)
T 2dlq_A 62 RSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSS 99 (124)
T ss_dssp SCCCCEECSSSCCEESSHHHHHHHHHHHSSSCSEECSS
T ss_pred CCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCccCCC
Confidence 45678899999999999999999999999999998863
No 158
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.39 E-value=3.8e-13 Score=45.58 Aligned_cols=38 Identities=29% Similarity=0.508 Sum_probs=34.6
Q ss_pred CCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 2 DPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 2 ~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
.++++|.|..|++.|.....|..|++.|.++++|.|.+
T Consensus 33 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~ 70 (110)
T 2csh_A 33 LGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNI 70 (110)
T ss_dssp SCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSS
T ss_pred CCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCC
Confidence 46789999999999999999999999999999999863
No 159
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=99.38 E-value=1.2e-12 Score=43.36 Aligned_cols=39 Identities=28% Similarity=0.623 Sum_probs=35.2
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCC--CCccCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGE--KPFVCPF 39 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~--~~~~c~~ 39 (39)
|.++++|.|..|++.|.....|..|++.|.++ ++|.|.+
T Consensus 30 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~ 70 (95)
T 2yt9_A 30 HSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQS 70 (95)
T ss_dssp SCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSS
T ss_pred cCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCC
Confidence 45788999999999999999999999999987 8999863
No 160
>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=99.37 E-value=3.5e-13 Score=40.20 Aligned_cols=33 Identities=24% Similarity=0.468 Sum_probs=29.4
Q ss_pred CCCCcceecc--ccccccccchhHHHHhHHhcCCC
Q psy4412 1 MDPTYLYACL--WCDYHTLNSGHMRDHIRRHTGEK 33 (39)
Q Consensus 1 h~~~~~~~c~--~c~~~~~~~~~~~~~~~~~~~~~ 33 (39)
|++++||.|. .|++.|.....|..|+++|++++
T Consensus 13 H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek 47 (47)
T 1ncs_A 13 EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47 (47)
T ss_dssp EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred cCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence 4678999996 79999999999999999999874
No 161
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=99.36 E-value=1.3e-12 Score=43.31 Aligned_cols=38 Identities=26% Similarity=0.499 Sum_probs=35.0
Q ss_pred CCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 2 DPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 2 ~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
.++++|.|..|++.|.....|..|++.|.++++|.|.+
T Consensus 4 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~ 41 (96)
T 2dmd_A 4 GSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKT 41 (96)
T ss_dssp CCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSS
T ss_pred CCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCC
Confidence 46789999999999999999999999999999999863
No 162
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=99.36 E-value=6.2e-15 Score=41.04 Aligned_cols=31 Identities=23% Similarity=0.412 Sum_probs=28.9
Q ss_pred cceeccccccccccchhHHHHhHHhcCCCCc
Q psy4412 5 YLYACLWCDYHTLNSGHMRDHIRRHTGEKPF 35 (39)
Q Consensus 5 ~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~ 35 (39)
+||.|..|++.|.....|..|+++|+++++|
T Consensus 1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~ 31 (32)
T 2kfq_A 1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL 31 (32)
T ss_dssp CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence 4789999999999999999999999999987
No 163
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=99.36 E-value=4.2e-13 Score=47.58 Aligned_cols=38 Identities=24% Similarity=0.399 Sum_probs=23.7
Q ss_pred CCCCcceeccc--cccccccchhHHHHhHHhcCCCCccCC
Q psy4412 1 MDPTYLYACLW--CDYHTLNSGHMRDHIRRHTGEKPFVCP 38 (39)
Q Consensus 1 h~~~~~~~c~~--c~~~~~~~~~~~~~~~~~~~~~~~~c~ 38 (39)
|+++++|.|.. |++.|.....|..|+++|+++++|.|.
T Consensus 115 h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c~ 154 (155)
T 2rpc_A 115 HTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS 154 (155)
T ss_dssp TCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCSC
T ss_pred hCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence 34555666664 666666666666666666666666664
No 164
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.35 E-value=1.1e-12 Score=41.31 Aligned_cols=34 Identities=18% Similarity=0.453 Sum_probs=30.1
Q ss_pred CCcceeccccccccccchhHHHHhHHhcCCCCccCC
Q psy4412 3 PTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCP 38 (39)
Q Consensus 3 ~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~ 38 (39)
+++||.|..|++.|. ...|..|+++ .+++||.|.
T Consensus 7 ~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~ 40 (66)
T 2eod_A 7 GKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACP 40 (66)
T ss_dssp CCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECT
T ss_pred CCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCC
Confidence 567899999999999 8889999988 889999886
No 165
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=99.34 E-value=1.4e-12 Score=35.21 Aligned_cols=30 Identities=20% Similarity=0.414 Sum_probs=27.1
Q ss_pred CcceeccccccccccchhHHHHhHHhcCCC
Q psy4412 4 TYLYACLWCDYHTLNSGHMRDHIRRHTGEK 33 (39)
Q Consensus 4 ~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~ 33 (39)
++||.|..|++.|.....|..|++.|++++
T Consensus 1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~k 30 (30)
T 2m0d_A 1 MKPYQCDYCGRSFSDPTSKMRHLETHDTDK 30 (30)
T ss_dssp CCCEECTTTCCEESCHHHHHHHHHTTCCCC
T ss_pred CcCccCCCCCcccCCHHHHHHHHHHhccCC
Confidence 478999999999999999999999998764
No 166
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=99.34 E-value=5e-13 Score=48.62 Aligned_cols=36 Identities=36% Similarity=0.713 Sum_probs=24.6
Q ss_pred CCcceeccccccccccchhHHHHhHHhcCCCCccCC
Q psy4412 3 PTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCP 38 (39)
Q Consensus 3 ~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~ 38 (39)
++++|.|..|++.|.....|..|++.|.++++|.|.
T Consensus 130 ~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~ 165 (190)
T 2i13_A 130 GEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCP 165 (190)
T ss_dssp CCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECT
T ss_pred CCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeECC
Confidence 456667777777777767777777777777777664
No 167
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=99.34 E-value=2.2e-13 Score=47.25 Aligned_cols=36 Identities=28% Similarity=0.505 Sum_probs=31.5
Q ss_pred CCCcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 2 DPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 2 ~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
++++||.|..|++.|.....|..|+++| +++|.|.+
T Consensus 70 ~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~ 105 (129)
T 2wbt_A 70 KAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPV 105 (129)
T ss_dssp HHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTT
T ss_pred CCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCC
Confidence 4568999999999999999999999998 88998863
No 168
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=99.34 E-value=5.9e-13 Score=45.45 Aligned_cols=35 Identities=40% Similarity=0.787 Sum_probs=25.6
Q ss_pred CCcceeccccccccccchhHHHHhHHhcCCCCccC
Q psy4412 3 PTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVC 37 (39)
Q Consensus 3 ~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c 37 (39)
++++|.|..|++.|.....|..|++.|.++++|.|
T Consensus 63 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C 97 (119)
T 2jp9_A 63 GVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSC 97 (119)
T ss_dssp CCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEEC
T ss_pred CCCCccCCccCchhCCHHHHHHHHHHhcCCCCeeC
Confidence 45667777777777777777777777777777776
No 169
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=99.33 E-value=1.9e-12 Score=34.79 Aligned_cols=29 Identities=34% Similarity=0.592 Sum_probs=26.4
Q ss_pred cceeccccccccccchhHHHHhHHhcCCC
Q psy4412 5 YLYACLWCDYHTLNSGHMRDHIRRHTGEK 33 (39)
Q Consensus 5 ~~~~c~~c~~~~~~~~~~~~~~~~~~~~~ 33 (39)
+||.|..|++.|.....|..|++.|++++
T Consensus 1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k 29 (29)
T 1rik_A 1 YKFACPECPKRFMRSDHLTLHILLHENKK 29 (29)
T ss_dssp CCEECSSSSCEESCSHHHHHHHTGGGSCC
T ss_pred CCccCCCCCchhCCHHHHHHHHHHhcCCC
Confidence 57999999999999999999999998764
No 170
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=99.32 E-value=3.1e-12 Score=41.89 Aligned_cols=38 Identities=32% Similarity=0.672 Sum_probs=30.3
Q ss_pred CCCCcceecc--ccccccccchhHHHHhHHhcCCCCccCC
Q psy4412 1 MDPTYLYACL--WCDYHTLNSGHMRDHIRRHTGEKPFVCP 38 (39)
Q Consensus 1 h~~~~~~~c~--~c~~~~~~~~~~~~~~~~~~~~~~~~c~ 38 (39)
|.++++|.|. .|++.|.....|..|++.|.++++|.|.
T Consensus 30 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~ 69 (89)
T 2wbs_A 30 HTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQ 69 (89)
T ss_dssp SCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECS
T ss_pred cCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCC
Confidence 4566788886 5888888888888888888888888875
No 171
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=99.32 E-value=3.5e-12 Score=35.04 Aligned_cols=30 Identities=20% Similarity=0.378 Sum_probs=27.1
Q ss_pred Ccceecc--ccccccccchhHHHHhHHhcCCC
Q psy4412 4 TYLYACL--WCDYHTLNSGHMRDHIRRHTGEK 33 (39)
Q Consensus 4 ~~~~~c~--~c~~~~~~~~~~~~~~~~~~~~~ 33 (39)
++||.|. .|++.|.....|..|+++|++++
T Consensus 1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~ 32 (32)
T 1zfd_A 1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA 32 (32)
T ss_dssp CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred CCCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence 4689999 89999999999999999998864
No 172
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=99.31 E-value=3.4e-12 Score=34.23 Aligned_cols=29 Identities=31% Similarity=0.567 Sum_probs=26.3
Q ss_pred cceeccccccccccchhHHHHhHHhcCCC
Q psy4412 5 YLYACLWCDYHTLNSGHMRDHIRRHTGEK 33 (39)
Q Consensus 5 ~~~~c~~c~~~~~~~~~~~~~~~~~~~~~ 33 (39)
+||.|..|++.|.....|..|++.|++++
T Consensus 1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~k 29 (29)
T 1ard_A 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29 (29)
T ss_dssp CCCBCTTTCCBCSSHHHHHHHHHHHSCCC
T ss_pred CCeECCCCCcccCCHHHHHHHHHHhcCCC
Confidence 47899999999999999999999998764
No 173
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=99.31 E-value=5.4e-12 Score=43.27 Aligned_cols=37 Identities=38% Similarity=0.654 Sum_probs=30.5
Q ss_pred CCCcceeccccccccccchhHHHHhHHhcCCCCccCC
Q psy4412 2 DPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCP 38 (39)
Q Consensus 2 ~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~ 38 (39)
+++++|.|..|++.|.....|..|++.|.++++|.|.
T Consensus 3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~ 39 (124)
T 2dlq_A 3 SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECP 39 (124)
T ss_dssp CCCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCT
T ss_pred CCCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECC
Confidence 4677888888888888888888888888888888875
No 174
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=99.31 E-value=2.4e-12 Score=34.50 Aligned_cols=29 Identities=34% Similarity=0.612 Sum_probs=26.4
Q ss_pred cceeccccccccccchhHHHHhHHhcCCC
Q psy4412 5 YLYACLWCDYHTLNSGHMRDHIRRHTGEK 33 (39)
Q Consensus 5 ~~~~c~~c~~~~~~~~~~~~~~~~~~~~~ 33 (39)
+||.|..|++.|.....|..|+++|++++
T Consensus 1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~k 29 (29)
T 2m0f_A 1 GPLKCRECGKQFTTSGNLKRHLRIHSGEK 29 (29)
T ss_dssp CCEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred CCccCCCCCCccCChhHHHHHHHHhcCCC
Confidence 47899999999999999999999998864
No 175
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=99.31 E-value=3.7e-12 Score=42.88 Aligned_cols=37 Identities=14% Similarity=0.117 Sum_probs=34.0
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVC 37 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c 37 (39)
|.++++|.|..|++.|.....|..|++.|.++++|.+
T Consensus 68 h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~~ 104 (106)
T 2ee8_A 68 HSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104 (106)
T ss_dssp SCCCCTTSCSSSCCCCSSHHHHHHHHHHTTSCCCCCC
T ss_pred hCCCCCeECCCcCCcccCHHHHHHHHHHhCCCCCCcC
Confidence 4678899999999999999999999999999999865
No 176
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=99.30 E-value=2.8e-12 Score=34.32 Aligned_cols=29 Identities=21% Similarity=0.457 Sum_probs=26.3
Q ss_pred cceeccccccccccchhHHHHhHHhcCCC
Q psy4412 5 YLYACLWCDYHTLNSGHMRDHIRRHTGEK 33 (39)
Q Consensus 5 ~~~~c~~c~~~~~~~~~~~~~~~~~~~~~ 33 (39)
+||.|..|++.|.....|..|+++|++++
T Consensus 1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~ 29 (29)
T 2m0e_A 1 KEHKCPHCDKKFNQVGNLKAHLKIHIADG 29 (29)
T ss_dssp CCCCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred CCCcCCCCCcccCCHHHHHHHHHHhccCC
Confidence 47899999999999999999999998764
No 177
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=99.30 E-value=4.9e-12 Score=34.05 Aligned_cols=30 Identities=20% Similarity=0.721 Sum_probs=26.9
Q ss_pred cceeccccccccccchhHHHHhHHhcCCCC
Q psy4412 5 YLYACLWCDYHTLNSGHMRDHIRRHTGEKP 34 (39)
Q Consensus 5 ~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~ 34 (39)
+||.|..|++.|.....|..|++.|.++++
T Consensus 1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~ 30 (30)
T 1klr_A 1 KTYQCQYCEFRSADSSNLKTHIKTKHSKEK 30 (30)
T ss_dssp CCCCCSSSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred CCccCCCCCCccCCHHHHHHHHHHHccCCC
Confidence 478999999999999999999999988754
No 178
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=99.30 E-value=2.1e-12 Score=43.64 Aligned_cols=38 Identities=16% Similarity=0.017 Sum_probs=30.9
Q ss_pred CCCCcceeccccccccccchhHHHHhH-HhcCCCCccCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIR-RHTGEKPFVCP 38 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~-~~~~~~~~~c~ 38 (39)
|+++++|.|..|++.|.....|..|++ .|.++++|.+.
T Consensus 64 H~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~ 102 (107)
T 1wjp_A 64 KCEYKKLTCLECMRTFKSSFSIWRHQVEVHNQNNMAPTS 102 (107)
T ss_dssp HCSTGGGEEGGGTEECSSHHHHHHHHHHTSCCCCCCCCC
T ss_pred cCCCCCccCccccchhCCHHHHHHHHHHHcCCCCCCCCC
Confidence 456788888888888888888888886 88888888763
No 179
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.28 E-value=1e-11 Score=39.99 Aligned_cols=38 Identities=24% Similarity=0.449 Sum_probs=34.2
Q ss_pred CCCcceeccc--cccccccchhHHHHhH-HhcCCCCccCCC
Q psy4412 2 DPTYLYACLW--CDYHTLNSGHMRDHIR-RHTGEKPFVCPF 39 (39)
Q Consensus 2 ~~~~~~~c~~--c~~~~~~~~~~~~~~~-~~~~~~~~~c~~ 39 (39)
+++++|.|.. |++.|.....|..|++ .|.++++|.|.+
T Consensus 3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~ 43 (79)
T 2dlk_A 3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPE 43 (79)
T ss_dssp SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSC
T ss_pred CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCC
Confidence 5778999987 9999999999999999 799999999863
No 180
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.27 E-value=5.1e-12 Score=40.05 Aligned_cols=36 Identities=14% Similarity=0.439 Sum_probs=32.4
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCcc
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFV 36 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~ 36 (39)
|+++++|.|..|++.|.....|..|++.+.++++..
T Consensus 32 H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~p 67 (70)
T 1x5w_A 32 HCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSGP 67 (70)
T ss_dssp GCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCCS
T ss_pred cCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCCC
Confidence 467889999999999999999999999999988753
No 181
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=99.27 E-value=6.8e-12 Score=41.78 Aligned_cols=37 Identities=38% Similarity=0.759 Sum_probs=24.7
Q ss_pred CCCcceecc--ccccccccchhHHHHhHHhcCCCCccCC
Q psy4412 2 DPTYLYACL--WCDYHTLNSGHMRDHIRRHTGEKPFVCP 38 (39)
Q Consensus 2 ~~~~~~~c~--~c~~~~~~~~~~~~~~~~~~~~~~~~c~ 38 (39)
.++++|.|. .|++.|.....|..|++.|.++++|.|.
T Consensus 41 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~ 79 (100)
T 2ebt_A 41 TGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCG 79 (100)
T ss_dssp SCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCS
T ss_pred CCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECC
Confidence 345666674 4777777777777777777777777664
No 182
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=99.27 E-value=8.6e-12 Score=42.87 Aligned_cols=36 Identities=31% Similarity=0.731 Sum_probs=22.2
Q ss_pred CCCcceeccc--cccccccchhHHHHhHHhcCCCCccC
Q psy4412 2 DPTYLYACLW--CDYHTLNSGHMRDHIRRHTGEKPFVC 37 (39)
Q Consensus 2 ~~~~~~~c~~--c~~~~~~~~~~~~~~~~~~~~~~~~c 37 (39)
.++++|.|.. |++.|.....|..|++.|.++++|.|
T Consensus 58 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C 95 (124)
T 1ubd_C 58 TGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 95 (124)
T ss_dssp SCCCCEECCSTTCCCEESCHHHHHHHHHHHHCCCCCCC
T ss_pred CCCCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCceEC
Confidence 4455666653 66666666666666666666666665
No 183
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=99.27 E-value=5.7e-12 Score=38.49 Aligned_cols=33 Identities=18% Similarity=0.558 Sum_probs=30.1
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEK 33 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~ 33 (39)
|+++++|.|..|++.|.....|..|+++|.+++
T Consensus 24 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k 56 (57)
T 1bbo_A 24 HTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56 (57)
T ss_dssp TSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred cCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence 567889999999999999999999999998875
No 184
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A
Probab=99.26 E-value=4.9e-12 Score=34.54 Aligned_cols=29 Identities=34% Similarity=0.673 Sum_probs=26.1
Q ss_pred cceecc--ccccccccchhHHHHhHHhcCCC
Q psy4412 5 YLYACL--WCDYHTLNSGHMRDHIRRHTGEK 33 (39)
Q Consensus 5 ~~~~c~--~c~~~~~~~~~~~~~~~~~~~~~ 33 (39)
+||.|. .|++.|.....|..|+++|++++
T Consensus 1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~k 31 (31)
T 1sp2_A 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31 (31)
T ss_dssp CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred CCcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence 478998 89999999999999999998864
No 185
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=99.26 E-value=6.6e-12 Score=44.42 Aligned_cols=37 Identities=32% Similarity=0.612 Sum_probs=23.0
Q ss_pred CCCcceeccc--cccccccchhHHHHh-HHhcCCCCccCC
Q psy4412 2 DPTYLYACLW--CDYHTLNSGHMRDHI-RRHTGEKPFVCP 38 (39)
Q Consensus 2 ~~~~~~~c~~--c~~~~~~~~~~~~~~-~~~~~~~~~~c~ 38 (39)
+++++|.|.. |++.|.....|..|+ +.|.++++|.|.
T Consensus 93 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~ 132 (155)
T 2gli_A 93 TGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCK 132 (155)
T ss_dssp TTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECC
T ss_pred CCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCC
Confidence 4555666665 666666666666665 566666666664
No 186
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=99.24 E-value=3.4e-12 Score=45.24 Aligned_cols=36 Identities=36% Similarity=0.693 Sum_probs=25.1
Q ss_pred CCcceeccc--cccccccchhHHHHhHHhcCCCCccCC
Q psy4412 3 PTYLYACLW--CDYHTLNSGHMRDHIRRHTGEKPFVCP 38 (39)
Q Consensus 3 ~~~~~~c~~--c~~~~~~~~~~~~~~~~~~~~~~~~c~ 38 (39)
++++|.|.. |++.|.....|..|++.|.++++|.|.
T Consensus 87 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~ 124 (155)
T 2rpc_A 87 GEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCE 124 (155)
T ss_dssp CCCSEECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCS
T ss_pred CCCcccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCC
Confidence 456677766 777777777777777777777777664
No 187
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=99.24 E-value=9.4e-12 Score=32.99 Aligned_cols=27 Identities=22% Similarity=0.509 Sum_probs=24.2
Q ss_pred CcceeccccccccccchhHHHHhHHhc
Q psy4412 4 TYLYACLWCDYHTLNSGHMRDHIRRHT 30 (39)
Q Consensus 4 ~~~~~c~~c~~~~~~~~~~~~~~~~~~ 30 (39)
++||.|..|++.|.....|..|++.|+
T Consensus 1 ek~~~C~~C~k~f~~~~~l~~H~~~H~ 27 (27)
T 2kvh_A 1 EKPFSCSLCPQRSRDFSAMTKHLRTHG 27 (27)
T ss_dssp CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence 478999999999999999999998764
No 188
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=99.23 E-value=1.2e-11 Score=40.56 Aligned_cols=37 Identities=46% Similarity=0.800 Sum_probs=32.4
Q ss_pred CCcceecc--ccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 3 PTYLYACL--WCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 3 ~~~~~~c~--~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
+++||.|. .|++.|.....|..|++.|.++++|.|.+
T Consensus 1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~ 39 (90)
T 1a1h_A 1 MERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRI 39 (90)
T ss_dssp --CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTT
T ss_pred CCCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCC
Confidence 46899998 69999999999999999999999999863
No 189
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=99.23 E-value=8e-12 Score=33.32 Aligned_cols=28 Identities=32% Similarity=0.495 Sum_probs=24.9
Q ss_pred CcceeccccccccccchhHHHHhHHhcC
Q psy4412 4 TYLYACLWCDYHTLNSGHMRDHIRRHTG 31 (39)
Q Consensus 4 ~~~~~c~~c~~~~~~~~~~~~~~~~~~~ 31 (39)
++||.|..|++.|.....|..|++.|++
T Consensus 1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~ 28 (28)
T 2kvf_A 1 MRPYSCSVCGKRFSLKHQMETHYRVHTG 28 (28)
T ss_dssp CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence 4689999999999999999999988754
No 190
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.23 E-value=8.6e-14 Score=44.24 Aligned_cols=36 Identities=11% Similarity=0.094 Sum_probs=30.6
Q ss_pred CcceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 4 TYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 4 ~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
+++|.|..|++.|.....|..|++.|.++++|.|.+
T Consensus 37 ~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~ 72 (73)
T 2ctu_A 37 RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSS 72 (73)
T ss_dssp SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCC
T ss_pred CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCC
Confidence 457788888888888888999999999999999974
No 191
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=98.86 E-value=1e-12 Score=35.42 Aligned_cols=29 Identities=31% Similarity=0.595 Sum_probs=26.0
Q ss_pred cceeccccccccccchhHHHHhHHhcCCC
Q psy4412 5 YLYACLWCDYHTLNSGHMRDHIRRHTGEK 33 (39)
Q Consensus 5 ~~~~c~~c~~~~~~~~~~~~~~~~~~~~~ 33 (39)
+||.|..|++.|.....|..|++.|++++
T Consensus 1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k 29 (29)
T 2lvt_A 1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK 29 (29)
Confidence 47899999999999999999999988764
No 192
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=99.22 E-value=1.7e-11 Score=42.11 Aligned_cols=36 Identities=33% Similarity=0.616 Sum_probs=30.3
Q ss_pred CCcceeccccccccccchhHHHHhHHhcCCCCccCC
Q psy4412 3 PTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCP 38 (39)
Q Consensus 3 ~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~ 38 (39)
+.++|.|..|++.|.....|..|++.|.++++|.|.
T Consensus 31 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~ 66 (124)
T 1ubd_C 31 GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT 66 (124)
T ss_dssp SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECC
T ss_pred CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCC
Confidence 456788888888888888888888888888888885
No 193
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=98.85 E-value=1.1e-12 Score=35.47 Aligned_cols=30 Identities=37% Similarity=0.783 Sum_probs=26.6
Q ss_pred CcceeccccccccccchhHHHHhHHhcCCC
Q psy4412 4 TYLYACLWCDYHTLNSGHMRDHIRRHTGEK 33 (39)
Q Consensus 4 ~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~ 33 (39)
++||.|..|++.|.....|..|++.|++++
T Consensus 1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k 30 (30)
T 2lvr_A 1 MKPYVCIHCQRQFADPGALQRHVRIHTGEK 30 (30)
Confidence 468999999999999999999999988763
No 194
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=99.21 E-value=6.5e-12 Score=45.71 Aligned_cols=36 Identities=44% Similarity=0.804 Sum_probs=23.8
Q ss_pred CCcceeccccccccccchhHHHHhHHhcCCCCccCC
Q psy4412 3 PTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCP 38 (39)
Q Consensus 3 ~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~ 38 (39)
++++|.|..|++.|.....|..|++.|.++++|.|.
T Consensus 102 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~ 137 (190)
T 2i13_A 102 GEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCP 137 (190)
T ss_dssp TCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECT
T ss_pred CCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECC
Confidence 455666666666666666666666666666666664
No 195
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=99.21 E-value=1.2e-11 Score=33.35 Aligned_cols=29 Identities=24% Similarity=0.422 Sum_probs=25.7
Q ss_pred cceeccccccccccchhHHHH-hHHhcCCC
Q psy4412 5 YLYACLWCDYHTLNSGHMRDH-IRRHTGEK 33 (39)
Q Consensus 5 ~~~~c~~c~~~~~~~~~~~~~-~~~~~~~~ 33 (39)
+||.|..|++.|.....|..| ++.|++++
T Consensus 1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~ 30 (30)
T 1paa_A 1 KAYACGLCNRAFTRRDLLIRHAQKIHSGNL 30 (30)
T ss_dssp CCSBCTTTCCBCSSSHHHHHHHTTTSCCCC
T ss_pred CCcCCcccCcccCChHHHHHHHHHHccCCC
Confidence 478999999999999999999 78888764
No 196
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=99.21 E-value=1.6e-11 Score=39.78 Aligned_cols=33 Identities=27% Similarity=0.634 Sum_probs=21.8
Q ss_pred ceec--cccccccccchhHHHHhHHhcCCCCccCC
Q psy4412 6 LYAC--LWCDYHTLNSGHMRDHIRRHTGEKPFVCP 38 (39)
Q Consensus 6 ~~~c--~~c~~~~~~~~~~~~~~~~~~~~~~~~c~ 38 (39)
||.| ..|++.|.....|..|++.|.++++|.|.
T Consensus 1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~ 35 (85)
T 2j7j_A 1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECP 35 (85)
T ss_dssp CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECC
T ss_pred CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCC
Confidence 4566 66666666666666666666666666664
No 197
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=99.21 E-value=7.5e-12 Score=33.30 Aligned_cols=27 Identities=26% Similarity=0.506 Sum_probs=24.0
Q ss_pred CcceeccccccccccchhHHHHhHHhc
Q psy4412 4 TYLYACLWCDYHTLNSGHMRDHIRRHT 30 (39)
Q Consensus 4 ~~~~~c~~c~~~~~~~~~~~~~~~~~~ 30 (39)
++||.|..|++.|.....|..|++.|+
T Consensus 1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~ 27 (27)
T 2kvg_A 1 AAPYRCPLCRAGCPSLASMQAHMRGHS 27 (27)
T ss_dssp CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence 478999999999999999999988763
No 198
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=99.20 E-value=2.7e-11 Score=41.30 Aligned_cols=37 Identities=32% Similarity=0.802 Sum_probs=21.9
Q ss_pred CCCcceeccc--cccccccchhHHHHhHHhcCCCCccCC
Q psy4412 2 DPTYLYACLW--CDYHTLNSGHMRDHIRRHTGEKPFVCP 38 (39)
Q Consensus 2 ~~~~~~~c~~--c~~~~~~~~~~~~~~~~~~~~~~~~c~ 38 (39)
+++++|.|.. |++.|.....|..|++.|.++++|.|.
T Consensus 2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~ 40 (119)
T 2jp9_A 2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCD 40 (119)
T ss_dssp CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECC
T ss_pred CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCC
Confidence 3455666654 666666666666666666666666554
No 199
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=99.20 E-value=2.1e-11 Score=39.36 Aligned_cols=34 Identities=21% Similarity=0.610 Sum_probs=31.5
Q ss_pred ceeccccccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 6 LYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 6 ~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
||.|..|++.|.....|..|++.|.++++|.|.+
T Consensus 1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~ 34 (82)
T 2kmk_A 1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQY 34 (82)
T ss_dssp CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSS
T ss_pred CccCCCCcccccCchhHHHHHHHcCCCCCeeCCc
Confidence 6889999999999999999999999999999863
No 200
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.20 E-value=2e-11 Score=40.98 Aligned_cols=35 Identities=14% Similarity=0.273 Sum_probs=30.3
Q ss_pred CCcceeccccccccccchhHHHH-hHHhcCCCCccC
Q psy4412 3 PTYLYACLWCDYHTLNSGHMRDH-IRRHTGEKPFVC 37 (39)
Q Consensus 3 ~~~~~~c~~c~~~~~~~~~~~~~-~~~~~~~~~~~c 37 (39)
++++|.|..|++.|.....|..| +++|+++..|.+
T Consensus 59 ~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p~~~~ 94 (96)
T 2ctd_A 59 KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLPSGPS 94 (96)
T ss_dssp CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCCSSCSC
T ss_pred CCCCeECCCCCCeeCCHHHHHHHhHHhcCCCCCCCC
Confidence 67899999999999999999999 889987655544
No 201
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=99.19 E-value=2e-11 Score=40.40 Aligned_cols=33 Identities=21% Similarity=0.536 Sum_probs=29.2
Q ss_pred CCCCcceeccccccccccchhHHHHh-HHhcCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHI-RRHTGEK 33 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~-~~~~~~~ 33 (39)
|++++||.|..|++.|.....|..|+ +.|++|.
T Consensus 51 H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~ 84 (85)
T 2lv2_A 51 LHAAQVFPCKYCPATFYSSPGLTRHINKCHPSEN 84 (85)
T ss_dssp TSCSSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred ccCCCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence 57899999999999999999999996 5787764
No 202
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.19 E-value=4.7e-11 Score=40.67 Aligned_cols=36 Identities=11% Similarity=0.152 Sum_probs=29.5
Q ss_pred CCCCcceeccccccccccchhHHHHhHH--hcCCCCcc
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRR--HTGEKPFV 36 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~--~~~~~~~~ 36 (39)
|++++||.|..|++.|.....|..|++. +.+++++.
T Consensus 14 H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~ 51 (115)
T 2dmi_A 14 FTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHE 51 (115)
T ss_dssp CCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCC
T ss_pred eCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCc
Confidence 5678899999999999999999999988 66666543
No 203
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=99.19 E-value=2e-11 Score=32.23 Aligned_cols=27 Identities=22% Similarity=0.518 Sum_probs=23.3
Q ss_pred ceeccccccccccchhHHHHhHHhcCC
Q psy4412 6 LYACLWCDYHTLNSGHMRDHIRRHTGE 32 (39)
Q Consensus 6 ~~~c~~c~~~~~~~~~~~~~~~~~~~~ 32 (39)
||.|..|++.|.....|..|++.|+++
T Consensus 1 ~~~C~~C~k~f~~~~~l~~H~~~h~~~ 27 (27)
T 1znf_A 1 XYKCGLCERSFVEKSALSRHQRVHKNX 27 (27)
T ss_dssp -CBCSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred CccCCCCCCcCCCHHHHHHHHHHcCCC
Confidence 578999999999999999999988764
No 204
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=99.17 E-value=2e-11 Score=41.21 Aligned_cols=34 Identities=21% Similarity=0.372 Sum_probs=18.9
Q ss_pred CCCcceeccccccccccchhHHHHhHHhcCCCCccC
Q psy4412 2 DPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVC 37 (39)
Q Consensus 2 ~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c 37 (39)
+++++|.|..|++.|.....|..|++.| +++|.|
T Consensus 12 ~~~~~~~C~~C~~~f~~~~~l~~H~~~H--~~~~~C 45 (107)
T 1wjp_A 12 ENKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVC 45 (107)
T ss_dssp CCCCCCBCTTTCCBCSSHHHHHHHHHHH--HHSBCC
T ss_pred CCCcCeECCCCCCccCCHHHHHHHHHHC--CCCccC
Confidence 3455566666666666655565555554 234444
No 205
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.17 E-value=9e-11 Score=38.16 Aligned_cols=34 Identities=15% Similarity=0.219 Sum_probs=32.2
Q ss_pred cceeccccccccccchhHHHHhHHhcCCCCccCC
Q psy4412 5 YLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCP 38 (39)
Q Consensus 5 ~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~ 38 (39)
++|.|..|++.|.....|..|++.+.+++++.|.
T Consensus 46 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~ 79 (86)
T 1x6h_A 46 AAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGE 79 (86)
T ss_dssp CCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCC
T ss_pred cceECCCCCChhCCHHHHHHHHHHccCCCCcccC
Confidence 7899999999999999999999999999999885
No 206
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=99.16 E-value=6.8e-11 Score=43.06 Aligned_cols=36 Identities=25% Similarity=0.556 Sum_probs=29.9
Q ss_pred CCcceec--cccccccccchhHHHHhHHhcCCCCccCC
Q psy4412 3 PTYLYAC--LWCDYHTLNSGHMRDHIRRHTGEKPFVCP 38 (39)
Q Consensus 3 ~~~~~~c--~~c~~~~~~~~~~~~~~~~~~~~~~~~c~ 38 (39)
++++|.| ..|++.|.....|..|++.|.++++|.|.
T Consensus 101 ~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 138 (190)
T 1tf6_A 101 KICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECP 138 (190)
T ss_dssp TTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCC
T ss_pred CcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCC
Confidence 4567888 77888888888888888888888888885
No 207
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.15 E-value=3.4e-11 Score=38.34 Aligned_cols=34 Identities=24% Similarity=0.326 Sum_probs=30.0
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKP 34 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~ 34 (39)
|.+++||.|..|++.|.....|..|++.|+++.+
T Consensus 37 h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~ 70 (72)
T 1x6e_A 37 HTGEKPYKCLECGKAFSQNSGLINHQRIHTSGPS 70 (72)
T ss_dssp GGCSCCEECSSSCCEESSHHHHHHHHHHHHSSSS
T ss_pred cCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCC
Confidence 4578899999999999999999999999987643
No 208
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=99.14 E-value=2.5e-11 Score=42.93 Aligned_cols=36 Identities=31% Similarity=0.691 Sum_probs=24.7
Q ss_pred CCcceeccc--cccccccchhHHHHhHHhcCCCCccCC
Q psy4412 3 PTYLYACLW--CDYHTLNSGHMRDHIRRHTGEKPFVCP 38 (39)
Q Consensus 3 ~~~~~~c~~--c~~~~~~~~~~~~~~~~~~~~~~~~c~ 38 (39)
++++|.|.. |++.|.....|..|++.|.++++|.|.
T Consensus 64 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~ 101 (155)
T 2gli_A 64 GEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCE 101 (155)
T ss_dssp CCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECC
T ss_pred CCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCC
Confidence 456667763 777777777777777777777777665
No 209
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.08 E-value=9.8e-12 Score=41.66 Aligned_cols=33 Identities=15% Similarity=0.202 Sum_probs=30.3
Q ss_pred CcceeccccccccccchhHHHHhHHhcCCCCcc
Q psy4412 4 TYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFV 36 (39)
Q Consensus 4 ~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~ 36 (39)
+++|.|..|++.|.....|..|++.|+++++..
T Consensus 52 ~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~~ 84 (98)
T 2gqj_A 52 QDALKCQHCRKQFKSKAGLNYHTMAEHSAKPSD 84 (98)
T ss_dssp HHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSSC
T ss_pred CCCEECCCCCCccCCHHHHHHHHHHHcCCCCCC
Confidence 678999999999999999999999999998754
No 210
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=99.07 E-value=5.2e-11 Score=43.35 Aligned_cols=34 Identities=32% Similarity=0.587 Sum_probs=16.5
Q ss_pred Ccceec--cccccccccchhHHHHhHHhcCCCCccC
Q psy4412 4 TYLYAC--LWCDYHTLNSGHMRDHIRRHTGEKPFVC 37 (39)
Q Consensus 4 ~~~~~c--~~c~~~~~~~~~~~~~~~~~~~~~~~~c 37 (39)
+++|.| ..|++.|.....|..|++.|.++++|.|
T Consensus 40 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C 75 (190)
T 1tf6_A 40 EKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTC 75 (190)
T ss_dssp CCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEEC
T ss_pred CCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeC
Confidence 344444 4455555544455555554444444444
No 211
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=98.62 E-value=2e-11 Score=32.07 Aligned_cols=25 Identities=32% Similarity=0.674 Sum_probs=22.6
Q ss_pred cceeccccccccccchhHHHHhHHh
Q psy4412 5 YLYACLWCDYHTLNSGHMRDHIRRH 29 (39)
Q Consensus 5 ~~~~c~~c~~~~~~~~~~~~~~~~~ 29 (39)
+||.|..|++.|.....|..|++.|
T Consensus 1 kp~~C~~C~k~f~~~~~l~~H~~~H 25 (26)
T 2lvu_A 1 KPYVCERCGKRFVQSSQLANHIRHH 25 (26)
Confidence 5789999999999999999998876
No 212
>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A
Probab=99.04 E-value=2.6e-10 Score=30.32 Aligned_cols=27 Identities=26% Similarity=0.539 Sum_probs=24.1
Q ss_pred cceecc--ccccccccchhHHHHhHHhcC
Q psy4412 5 YLYACL--WCDYHTLNSGHMRDHIRRHTG 31 (39)
Q Consensus 5 ~~~~c~--~c~~~~~~~~~~~~~~~~~~~ 31 (39)
++|.|. .|++.|.....|..|+++|++
T Consensus 1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~ 29 (29)
T 2ab3_A 1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG 29 (29)
T ss_dssp CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence 478999 999999999999999998864
No 213
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=99.03 E-value=1e-10 Score=35.62 Aligned_cols=29 Identities=28% Similarity=0.667 Sum_probs=26.4
Q ss_pred CCCcceeccccccccccchhHHHHhHHhc
Q psy4412 2 DPTYLYACLWCDYHTLNSGHMRDHIRRHT 30 (39)
Q Consensus 2 ~~~~~~~c~~c~~~~~~~~~~~~~~~~~~ 30 (39)
++++||.|..|++.|.....|..|++.+.
T Consensus 28 ~~~~~~~C~~C~~~f~~~~~l~~H~~~hh 56 (57)
T 3uk3_C 28 TGEKPYKCEFCEYAAAQKTSLRYHLERHH 56 (57)
T ss_dssp HCCCCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred CCCCCcCCCCCcchhCCHHHHHHHHHHhc
Confidence 46889999999999999999999998875
No 214
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.03 E-value=6.7e-10 Score=37.81 Aligned_cols=34 Identities=12% Similarity=0.278 Sum_probs=25.6
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKP 34 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~ 34 (39)
|++++||.|..|++.|.....|..|++.+.....
T Consensus 75 H~~~~~~~C~~C~k~f~~~~~L~~H~~~hh~~~~ 108 (115)
T 2dmi_A 75 EDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQK 108 (115)
T ss_dssp CCCCSSCBCSSSCCBCSSHHHHHHHHHHTTTTTC
T ss_pred cCCCcceECCCCCCccCCHHHHHHHHHHhCCccc
Confidence 4567788888888888888888888877665443
No 215
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.03 E-value=3.1e-10 Score=35.61 Aligned_cols=33 Identities=18% Similarity=0.328 Sum_probs=29.1
Q ss_pred CCCcceecc-ccccccccchhHHHHhHHhcCCCC
Q psy4412 2 DPTYLYACL-WCDYHTLNSGHMRDHIRRHTGEKP 34 (39)
Q Consensus 2 ~~~~~~~c~-~c~~~~~~~~~~~~~~~~~~~~~~ 34 (39)
++++||.|. .|++.|.....|..|+++|....+
T Consensus 32 ~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~ 65 (66)
T 2eod_A 32 CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTAL 65 (66)
T ss_dssp CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred cCCcCccCCcccCcccccHHHHHHHHHhhcccCc
Confidence 367899999 999999999999999999877654
No 216
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=99.02 E-value=3.7e-10 Score=36.87 Aligned_cols=35 Identities=40% Similarity=0.822 Sum_probs=32.2
Q ss_pred Ccceeccc--cccccccchhHHHHhHHhcCCCCccCC
Q psy4412 4 TYLYACLW--CDYHTLNSGHMRDHIRRHTGEKPFVCP 38 (39)
Q Consensus 4 ~~~~~c~~--c~~~~~~~~~~~~~~~~~~~~~~~~c~ 38 (39)
..+|.|.. |++.|.....|..|++.|.++++|.|.
T Consensus 3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~ 39 (89)
T 2wbs_A 3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCD 39 (89)
T ss_dssp CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECC
T ss_pred CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCC
Confidence 45789999 999999999999999999999999985
No 217
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=99.00 E-value=4.4e-10 Score=34.51 Aligned_cols=32 Identities=19% Similarity=0.359 Sum_probs=27.9
Q ss_pred CCCCcceeccccccccccchhHHHHh-HHhcCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHI-RRHTGE 32 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~-~~~~~~ 32 (39)
|+++++|.|..|++.|.....|..|+ +.|.++
T Consensus 25 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~ 57 (60)
T 2adr_A 25 HTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN 57 (60)
T ss_dssp TTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred hCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence 56788999999999999999999996 677664
No 218
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=98.99 E-value=1.2e-09 Score=36.28 Aligned_cols=35 Identities=37% Similarity=0.805 Sum_probs=32.0
Q ss_pred Ccceeccc--cccccccchhHHHHhHHhcCCCCccCC
Q psy4412 4 TYLYACLW--CDYHTLNSGHMRDHIRRHTGEKPFVCP 38 (39)
Q Consensus 4 ~~~~~c~~--c~~~~~~~~~~~~~~~~~~~~~~~~c~ 38 (39)
.++|.|.. |++.|.....|..|++.|.++++|.|.
T Consensus 13 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~ 49 (100)
T 2ebt_A 13 RRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCT 49 (100)
T ss_dssp CCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECC
T ss_pred CcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCC
Confidence 46789996 999999999999999999999999985
No 219
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=98.99 E-value=2e-10 Score=37.19 Aligned_cols=34 Identities=24% Similarity=0.580 Sum_probs=29.6
Q ss_pred CCCcceeccc--cccccccchhHHHHhHHhcCCCCccCC
Q psy4412 2 DPTYLYACLW--CDYHTLNSGHMRDHIRRHTGEKPFVCP 38 (39)
Q Consensus 2 ~~~~~~~c~~--c~~~~~~~~~~~~~~~~~~~~~~~~c~ 38 (39)
.++++|.|.. |++.|.....|..|++.|.+ |.|.
T Consensus 27 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~ 62 (85)
T 2j7j_A 27 TQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCK 62 (85)
T ss_dssp HTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECC
T ss_pred CCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCC
Confidence 4678999988 99999999999999999988 5554
No 220
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=98.98 E-value=8.7e-10 Score=34.39 Aligned_cols=30 Identities=17% Similarity=0.362 Sum_probs=27.0
Q ss_pred CCCcceeccccccccccchhHHHHhHHhcC
Q psy4412 2 DPTYLYACLWCDYHTLNSGHMRDHIRRHTG 31 (39)
Q Consensus 2 ~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~ 31 (39)
.++++|.|..|++.|.....|..|++.+.+
T Consensus 36 ~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~ 65 (66)
T 2drp_A 36 RNVKVYPCPFCFKEFTRKDNMTAHVKIIHK 65 (66)
T ss_dssp SSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred CCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence 478899999999999999999999988765
No 221
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=98.94 E-value=2e-10 Score=36.51 Aligned_cols=29 Identities=31% Similarity=0.509 Sum_probs=25.8
Q ss_pred CCCcceeccccccccccchhHHHHhHHhc
Q psy4412 2 DPTYLYACLWCDYHTLNSGHMRDHIRRHT 30 (39)
Q Consensus 2 ~~~~~~~c~~c~~~~~~~~~~~~~~~~~~ 30 (39)
.++++|.|..|++.|.....|..|++.|+
T Consensus 45 ~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht 73 (73)
T 1f2i_G 45 TGQKPFQCRICMRNFSRSDHLTTHIRTHT 73 (73)
T ss_dssp HCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred CCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence 46789999999999999999999988763
No 222
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=98.89 E-value=8.8e-11 Score=38.53 Aligned_cols=36 Identities=17% Similarity=0.179 Sum_probs=30.0
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVC 37 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c 37 (39)
|++++||.|..|++.|.....|..|++.+.+ .+|.|
T Consensus 26 H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c 61 (88)
T 1llm_C 26 HTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILE 61 (88)
T ss_dssp HHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHH
T ss_pred cCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchH
Confidence 3467899999999999999999999988874 45554
No 223
>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.82 E-value=1.6e-09 Score=35.03 Aligned_cols=35 Identities=23% Similarity=0.435 Sum_probs=29.9
Q ss_pred CCCcceeccccccccccchhHHHHhHHhcCCCCccCC
Q psy4412 2 DPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCP 38 (39)
Q Consensus 2 ~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~ 38 (39)
.+++|+.|..|+..|. ...|..|. .+.+++++.|.
T Consensus 13 c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~ 47 (75)
T 2d9k_A 13 CPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCG 47 (75)
T ss_dssp CCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECS
T ss_pred CCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcc
Confidence 4678999999999985 78889998 88899998886
No 224
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.75 E-value=1.7e-08 Score=32.36 Aligned_cols=33 Identities=12% Similarity=0.269 Sum_probs=27.8
Q ss_pred CCcceeccccccccccchhHHHHh-HHhcCCCCc
Q psy4412 3 PTYLYACLWCDYHTLNSGHMRDHI-RRHTGEKPF 35 (39)
Q Consensus 3 ~~~~~~c~~c~~~~~~~~~~~~~~-~~~~~~~~~ 35 (39)
++++|.|..|++.|.....|..|+ ..|.++++.
T Consensus 35 ~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~ 68 (78)
T 2d9h_A 35 AALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLA 68 (78)
T ss_dssp TTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSC
T ss_pred CCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence 368999999999999999999999 566666654
No 225
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=98.75 E-value=2.4e-08 Score=31.96 Aligned_cols=28 Identities=18% Similarity=0.436 Sum_probs=24.9
Q ss_pred CcceeccccccccccchhHHHHhHHhcC
Q psy4412 4 TYLYACLWCDYHTLNSGHMRDHIRRHTG 31 (39)
Q Consensus 4 ~~~~~c~~c~~~~~~~~~~~~~~~~~~~ 31 (39)
+++|.|..|++.|.....|..|++.+.+
T Consensus 43 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~ 70 (77)
T 2ct1_A 43 VAKFHCPHCDTVIARKSDLGVHLRKQHS 70 (77)
T ss_dssp CSSEECSSSSCEESSHHHHHHHHHHTSC
T ss_pred CCccCCCCCCCccCCHHHHHHHHHHhCC
Confidence 3799999999999999999999987554
No 226
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.73 E-value=2.2e-08 Score=33.02 Aligned_cols=32 Identities=22% Similarity=0.316 Sum_probs=28.3
Q ss_pred eeccccccccccchhHHHHhHH-hcCCCC--------ccCC
Q psy4412 7 YACLWCDYHTLNSGHMRDHIRR-HTGEKP--------FVCP 38 (39)
Q Consensus 7 ~~c~~c~~~~~~~~~~~~~~~~-~~~~~~--------~~c~ 38 (39)
+.|..|++.|.....|..|++. |.++++ |.|.
T Consensus 26 ~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~ 66 (95)
T 2ej4_A 26 RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECP 66 (95)
T ss_dssp SSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCS
T ss_pred CcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCC
Confidence 5688999999999999999998 888877 7775
No 227
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=98.68 E-value=6.9e-09 Score=32.82 Aligned_cols=29 Identities=24% Similarity=0.591 Sum_probs=24.6
Q ss_pred CCCCcceeccc--cccccccchhHHHHhHHh
Q psy4412 1 MDPTYLYACLW--CDYHTLNSGHMRDHIRRH 29 (39)
Q Consensus 1 h~~~~~~~c~~--c~~~~~~~~~~~~~~~~~ 29 (39)
|++++||.|.. |++.|.....|..|+++|
T Consensus 42 H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H 72 (72)
T 2epa_A 42 HTGEKPFSCSWKGCERRFARSDELSRHRRTH 72 (72)
T ss_dssp HSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred cCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence 46789999965 999999999999998654
No 228
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=98.65 E-value=3.6e-08 Score=34.10 Aligned_cols=29 Identities=14% Similarity=0.226 Sum_probs=26.9
Q ss_pred CcceeccccccccccchhHHHHhHHhcCC
Q psy4412 4 TYLYACLWCDYHTLNSGHMRDHIRRHTGE 32 (39)
Q Consensus 4 ~~~~~c~~c~~~~~~~~~~~~~~~~~~~~ 32 (39)
++||.|..|++.|.....|..|++.+++.
T Consensus 98 ~~~~~C~~C~k~f~~~~~l~~H~~~h~~~ 126 (129)
T 2wbt_A 98 EHTKVCPVCKKEFTSTDSALDHVCKKHNI 126 (129)
T ss_dssp CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence 67899999999999999999999999875
No 229
>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4
Probab=98.59 E-value=1.1e-08 Score=36.00 Aligned_cols=28 Identities=25% Similarity=0.451 Sum_probs=24.8
Q ss_pred CCCCcceeccccccccccchhHHHHhHH
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRR 28 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~ 28 (39)
|+|+++|.|..|++.|.....|..|.++
T Consensus 45 ~tGekpfyC~~C~K~F~~~~~L~~H~rs 72 (124)
T 1zr9_A 45 LPGGGLHRCLACARYFIDSTNLKTHFRS 72 (124)
T ss_dssp SGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred CCCCcceEcccCcchhCCHHHHHHHHhh
Confidence 4678999999999999999999998764
No 230
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.56 E-value=7.2e-09 Score=32.64 Aligned_cols=31 Identities=13% Similarity=0.188 Sum_probs=24.5
Q ss_pred CCCCcceeccccccccccchhHHHHhHHhcCCCCccCC
Q psy4412 1 MDPTYLYACLWCDYHTLNSGHMRDHIRRHTGEKPFVCP 38 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~c~ 38 (39)
|.+++||.|..|++.|.....|.. +++|.|.
T Consensus 13 h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~ 43 (73)
T 2ctu_A 13 HLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCE 43 (73)
T ss_dssp CCCCSEEECSSSCCEEECCCCCCC-------SSSCCCH
T ss_pred hCCCCCeeCCcccchhCCHHHhCc-------CCCCCCC
Confidence 567899999999999988776654 6677763
No 231
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=98.21 E-value=7.7e-07 Score=26.75 Aligned_cols=18 Identities=6% Similarity=-0.158 Sum_probs=15.7
Q ss_pred CCCCcceecccccccccc
Q psy4412 1 MDPTYLYACLWCDYHTLN 18 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~ 18 (39)
|++++||.|..|++.|.+
T Consensus 36 H~~~k~~~C~~C~k~F~~ 53 (54)
T 2eps_A 36 HTSERPHKCQVWVSGPSS 53 (54)
T ss_dssp SCCCCCCCSSSSCCSSCC
T ss_pred cCCCCCccCCCCCCCCCC
Confidence 568899999999999865
No 232
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=98.18 E-value=1e-07 Score=28.72 Aligned_cols=27 Identities=19% Similarity=0.338 Sum_probs=22.1
Q ss_pred ccccccchhHHHHhHHhcCCCCccCCC
Q psy4412 13 DYHTLNSGHMRDHIRRHTGEKPFVCPF 39 (39)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~c~~ 39 (39)
++.|.....+..|++.|+++++|.|.+
T Consensus 3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~ 29 (54)
T 1yui_A 3 AKRAKHPPGTEKPRSRSQSEQPATCPI 29 (54)
T ss_dssp CCCCSCSSCCCCCHHHHTSSCCEECTT
T ss_pred ccccCCCcchhhHHHhcCCCCCccCCC
Confidence 356777777888999999999999964
No 233
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=98.06 E-value=1.1e-06 Score=27.18 Aligned_cols=21 Identities=14% Similarity=0.278 Sum_probs=17.6
Q ss_pred CCCCcceeccccccccccchh
Q psy4412 1 MDPTYLYACLWCDYHTLNSGH 21 (39)
Q Consensus 1 h~~~~~~~c~~c~~~~~~~~~ 21 (39)
|++++||.|..|++.|.....
T Consensus 34 H~~~k~~~C~~C~k~f~~~~~ 54 (62)
T 1vd4_A 34 DPMTGTFRCTFCHTEVEEDES 54 (62)
T ss_dssp ETTTTEEBCSSSCCBCEECTT
T ss_pred cCCCCCEECCCCCCccccCcc
Confidence 568899999999999976654
No 234
>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}
Probab=97.35 E-value=0.00037 Score=21.91 Aligned_cols=30 Identities=17% Similarity=0.464 Sum_probs=23.6
Q ss_pred cccccccccchhHHHHh-HHhcCCC------CccCCC
Q psy4412 10 LWCDYHTLNSGHMRDHI-RRHTGEK------PFVCPF 39 (39)
Q Consensus 10 ~~c~~~~~~~~~~~~~~-~~~~~~~------~~~c~~ 39 (39)
..|++.|.....|..|+ ..|.+.+ +|.|.+
T Consensus 7 ~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W 43 (64)
T 1zw8_A 7 KECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNW 43 (64)
T ss_dssp TTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCC
T ss_pred CCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeC
Confidence 34899999999999998 4787665 687753
No 235
>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.14 E-value=0.00078 Score=20.34 Aligned_cols=27 Identities=15% Similarity=0.165 Sum_probs=23.1
Q ss_pred cceeccccccccccchhHHHHhHHhcC
Q psy4412 5 YLYACLWCDYHTLNSGHMRDHIRRHTG 31 (39)
Q Consensus 5 ~~~~c~~c~~~~~~~~~~~~~~~~~~~ 31 (39)
.++.|..|+..|.....|..|++..-+
T Consensus 11 ~~~~CPrCn~~f~~~~sLr~HmkycCp 37 (49)
T 2e72_A 11 GRKICPRCNAQFRVTEALRGHMCYCCP 37 (49)
T ss_dssp SCCCCTTTCCCCSSHHHHHHHHHHHCT
T ss_pred CceeCCcccccccchHHHHhhhhhcCc
Confidence 468899999999999999999985544
No 236
>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A
Probab=96.52 E-value=0.003 Score=18.01 Aligned_cols=29 Identities=17% Similarity=0.064 Sum_probs=23.4
Q ss_pred cceeccccccccccchhHHHHhHHhcCCC
Q psy4412 5 YLYACLWCDYHTLNSGHMRDHIRRHTGEK 33 (39)
Q Consensus 5 ~~~~c~~c~~~~~~~~~~~~~~~~~~~~~ 33 (39)
....|..|.-+|.....+..|.+..-..+
T Consensus 7 ~~~~C~~C~IsF~~l~ty~aHKk~YC~s~ 35 (36)
T 1fu9_A 7 MKKYCSTCDISFNYVKTYLAHKQFYCKNK 35 (36)
T ss_dssp CCSEETTTTEECSSHHHHHHHHHHTSCCC
T ss_pred CcCeeccccceehhhHHHhhhheecCCCC
Confidence 45789999999999999999987665443
No 237
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=95.34 E-value=0.015 Score=16.33 Aligned_cols=25 Identities=12% Similarity=0.180 Sum_probs=20.7
Q ss_pred CcceeccccccccccchhHHHHhHH
Q psy4412 4 TYLYACLWCDYHTLNSGHMRDHIRR 28 (39)
Q Consensus 4 ~~~~~c~~c~~~~~~~~~~~~~~~~ 28 (39)
...|.|..|.+.+.....|..|-..
T Consensus 3 ~EGFiCP~C~~~l~s~~~L~~Hye~ 27 (34)
T 3mjh_B 3 SEGFICPQCMKSLGSADELFKHYEA 27 (34)
T ss_dssp SEEEECTTTCCEESSHHHHHHHHHH
T ss_pred CcccCCcHHHHHcCCHHHHHHHHHh
Confidence 3458999999999999999988653
No 238
>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}
Probab=95.19 E-value=0.01 Score=20.07 Aligned_cols=25 Identities=24% Similarity=0.534 Sum_probs=19.2
Q ss_pred eeccccccccccchhHHHHhHHhcCCCC
Q psy4412 7 YACLWCDYHTLNSGHMRDHIRRHTGEKP 34 (39)
Q Consensus 7 ~~c~~c~~~~~~~~~~~~~~~~~~~~~~ 34 (39)
..|.+||+.|.. |..|...+.+..|
T Consensus 22 iiClecGK~fK~---LkRHL~~~hgltp 46 (87)
T 2jsp_A 22 IVCLECGGSFKS---LKRHLTTHHSMTP 46 (87)
T ss_dssp EECTBTCCEESB---HHHHHHHTTCSCH
T ss_pred eEecccchhhHH---HHHHHHHccCCCH
Confidence 579999999875 6688888666544
No 239
>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*
Probab=95.07 E-value=0.024 Score=21.89 Aligned_cols=26 Identities=12% Similarity=0.225 Sum_probs=21.0
Q ss_pred Ccceecccccccccc-chhHHHHhHHh
Q psy4412 4 TYLYACLWCDYHTLN-SGHMRDHIRRH 29 (39)
Q Consensus 4 ~~~~~c~~c~~~~~~-~~~~~~~~~~~ 29 (39)
..|..|..|+..|.+ .+.|..|...+
T Consensus 167 ~~~L~C~~C~~~f~n~~~~LK~HL~~e 193 (204)
T 3sp4_A 167 QEDLKCWRCGETFGRHFTKLKAHLQEE 193 (204)
T ss_dssp GSCCBCTTTCCBCTTCHHHHHHHHHHH
T ss_pred CCCceeCCCCchhhcccHHHHHHHHHH
Confidence 357899999999987 88888887654
No 240
>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4
Probab=95.01 E-value=0.024 Score=20.09 Aligned_cols=24 Identities=13% Similarity=0.128 Sum_probs=19.8
Q ss_pred CcceeccccccccccchhHHHHhH
Q psy4412 4 TYLYACLWCDYHTLNSGHMRDHIR 27 (39)
Q Consensus 4 ~~~~~c~~c~~~~~~~~~~~~~~~ 27 (39)
...+.|..|...|.....+..|..
T Consensus 91 ~~~~~C~~C~~~f~s~~~~~~H~~ 114 (127)
T 1zu1_A 91 DRSKCCPVCNMTFSSPVVAESHYI 114 (127)
T ss_dssp CTTTEETTTTEECSSHHHHHHHHT
T ss_pred CCCeEcCCCCCEeCCHHHHHHHHC
Confidence 456789999999999888887754
No 241
>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4
Probab=94.67 E-value=0.023 Score=17.62 Aligned_cols=21 Identities=29% Similarity=0.431 Sum_probs=18.1
Q ss_pred eeccccccccccchhHHHHhH
Q psy4412 7 YACLWCDYHTLNSGHMRDHIR 27 (39)
Q Consensus 7 ~~c~~c~~~~~~~~~~~~~~~ 27 (39)
-.|..|+..|.....++.|+.
T Consensus 14 ~eC~lC~vkYs~r~slqDHIF 34 (55)
T 2yrk_A 14 PECTLCGVKYSARLSIRDHIF 34 (55)
T ss_dssp SCCTTTTCCCCSSSCHHHHHT
T ss_pred ccccccCcccccccchhhhhc
Confidence 489999999999988988864
No 242
>1wir_A Protein arginine N-methyltransferase 3; C2H2 zinc finger domain, PRMT3, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.37.1.5
Probab=93.10 E-value=0.13 Score=18.38 Aligned_cols=28 Identities=18% Similarity=0.306 Sum_probs=23.4
Q ss_pred CcceeccccccccccchhHHHHhHHhcC
Q psy4412 4 TYLYACLWCDYHTLNSGHMRDHIRRHTG 31 (39)
Q Consensus 4 ~~~~~c~~c~~~~~~~~~~~~~~~~~~~ 31 (39)
..+..|..|...|.....+..|++...+
T Consensus 13 ~~~~~CLFCd~~~~s~~~~l~H~k~~H~ 40 (121)
T 1wir_A 13 RQHTPCLFCDRLFASAEETFSHCKLEHQ 40 (121)
T ss_dssp CCCEECSSSCCEESSHHHHHHHHHHSSC
T ss_pred CCceeEecCCCcccCHHHHHHHHHHhcC
Confidence 3568899999999999999999886654
No 243
>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A
Probab=89.29 E-value=0.22 Score=13.79 Aligned_cols=24 Identities=21% Similarity=0.426 Sum_probs=19.4
Q ss_pred ceeccccccccccchhHHHHhHHh
Q psy4412 6 LYACLWCDYHTLNSGHMRDHIRRH 29 (39)
Q Consensus 6 ~~~c~~c~~~~~~~~~~~~~~~~~ 29 (39)
...|..|.+-+....++..|.+-.
T Consensus 9 kqhcrfckkkysdvknlikhire~ 32 (37)
T 2elu_A 9 KQHCRFCKKKYSDVKNLIKHIRDA 32 (37)
T ss_dssp CCEETTTTEECSSHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 457999999998888898887743
No 244
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=88.86 E-value=0.18 Score=17.73 Aligned_cols=12 Identities=17% Similarity=0.321 Sum_probs=10.4
Q ss_pred cceecccccccc
Q psy4412 5 YLYACLWCDYHT 16 (39)
Q Consensus 5 ~~~~c~~c~~~~ 16 (39)
.|+.|..||..|
T Consensus 66 ~p~~C~~CG~~F 77 (105)
T 2gmg_A 66 KPAQCRKCGFVF 77 (105)
T ss_dssp CCCBBTTTCCBC
T ss_pred ECcChhhCcCee
Confidence 478999999988
No 245
>2czr_A TBP-interacting protein; tata-binding protein (TBP), hyperthermophilic archaeon, Zn-finger motif, transcription; 2.30A {Thermococcus kodakarensis} SCOP: c.52.4.1
Probab=88.79 E-value=0.36 Score=18.74 Aligned_cols=23 Identities=26% Similarity=0.634 Sum_probs=17.7
Q ss_pred eeccccccccccchhHHHHhHHhc
Q psy4412 7 YACLWCDYHTLNSGHMRDHIRRHT 30 (39)
Q Consensus 7 ~~c~~c~~~~~~~~~~~~~~~~~~ 30 (39)
|.|..|++ +..-.++..|++.|.
T Consensus 155 YKCe~CgK-YvDId~~~~Hlk~Hg 177 (226)
T 2czr_A 155 YKCEECGK-YVDIENLEAHLREHG 177 (226)
T ss_dssp EECTTTCC-EEEGGGHHHHHHTTT
T ss_pred EehhhcCc-eecHHHHHHHHHHcC
Confidence 68999997 556677888887664
No 246
>2i5o_A DNA polymerase ETA; zinc finger, DNA polymerase,POL ETA, UBZ, ubiquitin-binding zinc finger, translesion synthesis, ubiquitin-binding domain; HET: DNA; NMR {Homo sapiens}
Probab=87.39 E-value=0.36 Score=13.89 Aligned_cols=24 Identities=21% Similarity=0.254 Sum_probs=16.4
Q ss_pred cceeccccccccccchhHHHHhHHh
Q psy4412 5 YLYACLWCDYHTLNSGHMRDHIRRH 29 (39)
Q Consensus 5 ~~~~c~~c~~~~~~~~~~~~~~~~~ 29 (39)
-.+.|..|+..+.. ..+..|.-.|
T Consensus 8 ~~~~C~~C~~~i~~-~~~~EH~D~H 31 (39)
T 2i5o_A 8 DQVPCEKCGSLVPV-WDMPEHMDYH 31 (39)
T ss_dssp CEEECTTTCCEEEG-GGHHHHHHHH
T ss_pred CCcccccccCcCCc-ccccchhhHH
Confidence 35789999988776 4456665444
No 247
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=87.26 E-value=0.31 Score=13.02 Aligned_cols=21 Identities=19% Similarity=0.627 Sum_probs=15.7
Q ss_pred eeccccccccccchhHHHHhH
Q psy4412 7 YACLWCDYHTLNSGHMRDHIR 27 (39)
Q Consensus 7 ~~c~~c~~~~~~~~~~~~~~~ 27 (39)
+.|..|.........+..|..
T Consensus 4 ~~CpvCk~q~Pd~kt~~~H~e 24 (28)
T 2jvx_A 4 FCCPKCQYQAPDMDTLQIHVM 24 (28)
T ss_dssp EECTTSSCEESSHHHHHHHHH
T ss_pred ccCccccccCcChHHHHHHHH
Confidence 678999887777777776643
No 248
>2hqh_E Restin; beta/BETA structure, zinc finger motif, structural protein, binding; 1.80A {Homo sapiens}
Probab=86.44 E-value=0.22 Score=13.13 Aligned_cols=9 Identities=33% Similarity=0.973 Sum_probs=4.0
Q ss_pred Ccceeccccc
Q psy4412 4 TYLYACLWCD 13 (39)
Q Consensus 4 ~~~~~c~~c~ 13 (39)
++|| |..|+
T Consensus 2 ~RpY-Ce~CE 10 (26)
T 2hqh_E 2 SRPY-CEICE 10 (26)
T ss_dssp --CE-ETTTT
T ss_pred CCcc-chHHH
Confidence 4565 56664
No 249
>1wys_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}
Probab=84.40 E-value=0.4 Score=15.79 Aligned_cols=15 Identities=13% Similarity=0.129 Sum_probs=11.8
Q ss_pred cceeccccccccccc
Q psy4412 5 YLYACLWCDYHTLNS 19 (39)
Q Consensus 5 ~~~~c~~c~~~~~~~ 19 (39)
-|+.|..|+..|...
T Consensus 28 lpf~C~~C~~~FC~~ 42 (75)
T 1wys_A 28 LPFVCDGCSGIFCLE 42 (75)
T ss_dssp CCEECTTTCCEECST
T ss_pred eeeECcccCcCcCcc
Confidence 478999999888653
No 250
>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A
Probab=83.55 E-value=0.53 Score=18.15 Aligned_cols=11 Identities=27% Similarity=0.694 Sum_probs=8.3
Q ss_pred ceecccccccc
Q psy4412 6 LYACLWCDYHT 16 (39)
Q Consensus 6 ~~~c~~c~~~~ 16 (39)
-|.|..||..+
T Consensus 171 ~~~C~~CG~i~ 181 (202)
T 1yuz_A 171 FHLCPICGYIH 181 (202)
T ss_dssp EEECSSSCCEE
T ss_pred EEEECCCCCEE
Confidence 47888888764
No 251
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=83.32 E-value=0.48 Score=14.31 Aligned_cols=14 Identities=21% Similarity=0.368 Sum_probs=8.9
Q ss_pred ceeccccccccccc
Q psy4412 6 LYACLWCDYHTLNS 19 (39)
Q Consensus 6 ~~~c~~c~~~~~~~ 19 (39)
-|.|..|+..|...
T Consensus 3 iY~C~rCg~~fs~~ 16 (48)
T 4ayb_P 3 VYRCGKCWKTFTDE 16 (48)
T ss_dssp --CCCCTTTTCCCC
T ss_pred EEEeeccCCCccHH
Confidence 36788888877654
No 252
>2odx_A Cytochrome C oxidase polypeptide IV; all beta-protein, metallo-protein, oxidoreductase; NMR {Saccharomyces cerevisiae}
Probab=82.40 E-value=0.84 Score=15.22 Aligned_cols=13 Identities=15% Similarity=0.169 Sum_probs=10.5
Q ss_pred cceeccccccccc
Q psy4412 5 YLYACLWCDYHTL 17 (39)
Q Consensus 5 ~~~~c~~c~~~~~ 17 (39)
++..|..|+.-|.
T Consensus 55 ~~~RC~eCG~~fk 67 (80)
T 2odx_A 55 EVARCWECGSVYK 67 (80)
T ss_dssp CEEECSSSCCEEE
T ss_pred CCeECCCCCeEEE
Confidence 5788999998774
No 253
>1v54_F VI, cytochrome C oxidase polypeptide VB; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: g.41.5.3 PDB: 1oco_F* 1occ_F* 1ocz_F* 1ocr_F* 1v55_F* 2dyr_F* 2dys_F* 2eij_F* 2eik_F* 2eil_F* 2eim_F* 2ein_F* 2occ_F* 2ybb_Q* 2zxw_F* 3abk_F* 3abl_F* 3abm_F* 3ag1_F* 3ag2_F* ...
Probab=81.69 E-value=0.8 Score=15.86 Aligned_cols=13 Identities=23% Similarity=0.294 Sum_probs=10.2
Q ss_pred cceeccccccccc
Q psy4412 5 YLYACLWCDYHTL 17 (39)
Q Consensus 5 ~~~~c~~c~~~~~ 17 (39)
++..|..|+..|.
T Consensus 78 ~~~RC~eCG~~fk 90 (98)
T 1v54_F 78 EAQRCPSCGTHYK 90 (98)
T ss_dssp SCEECTTTCCEEE
T ss_pred CceECCCCCeEEE
Confidence 4788999998664
No 254
>1x4v_A Hypothetical protein LOC130617; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=79.68 E-value=0.77 Score=14.62 Aligned_cols=14 Identities=14% Similarity=0.247 Sum_probs=10.8
Q ss_pred cceecccccccccc
Q psy4412 5 YLYACLWCDYHTLN 18 (39)
Q Consensus 5 ~~~~c~~c~~~~~~ 18 (39)
.++.|..|+..|..
T Consensus 26 l~f~C~~C~~~FC~ 39 (63)
T 1x4v_A 26 MKLTCERCSRNFCI 39 (63)
T ss_dssp SCCBCSSSCCBCCH
T ss_pred cceECCCCCcccCc
Confidence 47889989888763
No 255
>2y69_F Cytochrome C oxidase subunit 5B; electron transport, complex IV, proton pumps, membrane prote; HET: TPO HEA CHD PEK PGV DMU; 1.95A {Bos taurus}
Probab=78.52 E-value=1.1 Score=16.33 Aligned_cols=13 Identities=23% Similarity=0.294 Sum_probs=10.3
Q ss_pred cceeccccccccc
Q psy4412 5 YLYACLWCDYHTL 17 (39)
Q Consensus 5 ~~~~c~~c~~~~~ 17 (39)
++..|..|+.-|.
T Consensus 109 ~p~RCpeCG~~fk 121 (129)
T 2y69_F 109 EAQRCPSCGTHYK 121 (129)
T ss_dssp SCEECTTTCCEEE
T ss_pred CceeCCCCCeEEE
Confidence 4788999998764
No 256
>3ax1_A Serrate RNA effector molecule; miRNA processing, protein binding; 2.74A {Arabidopsis thaliana}
Probab=76.23 E-value=1.1 Score=19.11 Aligned_cols=26 Identities=15% Similarity=0.305 Sum_probs=21.3
Q ss_pred ceec--cccccccccchhHHHHhHHhcC
Q psy4412 6 LYAC--LWCDYHTLNSGHMRDHIRRHTG 31 (39)
Q Consensus 6 ~~~c--~~c~~~~~~~~~~~~~~~~~~~ 31 (39)
.|.| ..|++-|.....+..|+..-.+
T Consensus 304 K~~C~~~~C~KLFk~~eFV~KHi~~KH~ 331 (358)
T 3ax1_A 304 KYGCGAKGCTKLFHAAEFVYKHLKLKHT 331 (358)
T ss_dssp EEEECSSSCCCEESSHHHHHHHHHHHCH
T ss_pred ccCCCCCCcCcccCCHHHHHHHHHhccH
Confidence 5778 4799999999999999876554
No 257
>1wfe_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=75.36 E-value=1.2 Score=15.05 Aligned_cols=15 Identities=13% Similarity=0.346 Sum_probs=11.2
Q ss_pred cceeccccccccccc
Q psy4412 5 YLYACLWCDYHTLNS 19 (39)
Q Consensus 5 ~~~~c~~c~~~~~~~ 19 (39)
-|+.|..|+..|...
T Consensus 39 l~f~C~~C~~~FC~~ 53 (86)
T 1wfe_A 39 VAVICPYCEKNFCLR 53 (86)
T ss_dssp SCEECTTTCCEECGG
T ss_pred cceECCCCCcccccc
Confidence 367899898888643
No 258
>2djr_A Zinc finger BED domain-containing protein 2; C2H2 type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=74.19 E-value=2.2 Score=14.09 Aligned_cols=23 Identities=13% Similarity=0.401 Sum_probs=16.0
Q ss_pred eeccccccccc-------cchhHHHHhHHh
Q psy4412 7 YACLWCDYHTL-------NSGHMRDHIRRH 29 (39)
Q Consensus 7 ~~c~~c~~~~~-------~~~~~~~~~~~~ 29 (39)
-.|..|++.+. .-+.|..|+...
T Consensus 29 A~Ck~C~k~ls~g~~s~~GTS~L~rHL~~~ 58 (76)
T 2djr_A 29 ATCRLCGRQVSRGPGVNVGTTALWKHLKSM 58 (76)
T ss_dssp EEESSSCCBCCCCSSCCSSSCHHHHHHHHT
T ss_pred EECCCCCCccCCCCCCCCchHHHHHHHHHH
Confidence 46889998876 235678887644
No 259
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=73.79 E-value=1.5 Score=13.05 Aligned_cols=12 Identities=33% Similarity=0.711 Sum_probs=8.7
Q ss_pred ceeccccccccc
Q psy4412 6 LYACLWCDYHTL 17 (39)
Q Consensus 6 ~~~c~~c~~~~~ 17 (39)
.|.|..|+..+-
T Consensus 4 ~y~C~vCGyvyd 15 (46)
T 6rxn_A 4 KYVCNVCGYEYD 15 (46)
T ss_dssp CEEETTTCCEEC
T ss_pred EEECCCCCeEEe
Confidence 478888887664
No 260
>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_V
Probab=72.78 E-value=0.73 Score=22.45 Aligned_cols=24 Identities=21% Similarity=0.498 Sum_probs=0.0
Q ss_pred eeccccccccccchhHHHHhHHhc
Q psy4412 7 YACLWCDYHTLNSGHMRDHIRRHT 30 (39)
Q Consensus 7 ~~c~~c~~~~~~~~~~~~~~~~~~ 30 (39)
|.|.+|...|.....|..|+..|.
T Consensus 181 y~C~VC~a~F~S~~~L~~HqttHs 204 (1275)
T 1ej6_B 181 YQCHVCSAVLFSPLDLDAHVASHG 204 (1275)
T ss_dssp ------------------------
T ss_pred eehhhhhhhhCCHHHHHHHHHhcc
Confidence 889999999999999999987664
No 261
>1yk4_A Rubredoxin, RD; electron transport; 0.69A {Pyrococcus abyssi} PDB: 2pya_A 1yk5_A 1bq8_A 1bq9_A* 3kyu_A 3kyv_A 3kyw_A 3kyx_A 3kyy_A 3ryg_A 3rz6_A 3rzt_A 3ss2_A 1brf_A 1caa_A 1cad_A 1vcx_A 1zrp_A 1iu5_A 1iu6_A ...
Probab=71.18 E-value=1.8 Score=13.17 Aligned_cols=11 Identities=27% Similarity=0.664 Sum_probs=7.5
Q ss_pred ceecccccccc
Q psy4412 6 LYACLWCDYHT 16 (39)
Q Consensus 6 ~~~c~~c~~~~ 16 (39)
.|.|..|+..+
T Consensus 2 ~~~C~~CGyvY 12 (52)
T 1yk4_A 2 KLSCKICGYIY 12 (52)
T ss_dssp EEEESSSSCEE
T ss_pred cEEeCCCCeEE
Confidence 36778887655
No 262
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=69.14 E-value=2.9 Score=14.31 Aligned_cols=15 Identities=20% Similarity=0.401 Sum_probs=10.2
Q ss_pred CCcceeccccccccc
Q psy4412 3 PTYLYACLWCDYHTL 17 (39)
Q Consensus 3 ~~~~~~c~~c~~~~~ 17 (39)
.+..+.|..|++.|-
T Consensus 26 ~~~l~pCRvC~RvfH 40 (89)
T 1wil_A 26 AESLFPCRVCTRVFH 40 (89)
T ss_dssp SSCCSSCSSSSSCCC
T ss_pred ccceecccccccccc
Confidence 344577888887664
No 263
>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}
Probab=69.10 E-value=3.6 Score=14.47 Aligned_cols=22 Identities=23% Similarity=0.564 Sum_probs=17.4
Q ss_pred eecc---ccccccccchhHHHHhHH
Q psy4412 7 YACL---WCDYHTLNSGHMRDHIRR 28 (39)
Q Consensus 7 ~~c~---~c~~~~~~~~~~~~~~~~ 28 (39)
|.|. .|.++|.+..+|..|+..
T Consensus 59 f~C~~~~~CkrtyLs~rdlqaHI~~ 83 (101)
T 3vk6_A 59 FMCSIVQGCKRTYLSQRDLQAHINH 83 (101)
T ss_dssp CCCCCCCCCCCCCSSHHHHHHHHHH
T ss_pred EECCCCCCHHHHhcCHHHHHHHHHH
Confidence 5555 488999999999999763
No 264
>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A
Probab=68.88 E-value=2.6 Score=12.79 Aligned_cols=12 Identities=33% Similarity=0.894 Sum_probs=8.3
Q ss_pred ceeccccccccc
Q psy4412 6 LYACLWCDYHTL 17 (39)
Q Consensus 6 ~~~c~~c~~~~~ 17 (39)
.|.|..|+..+-
T Consensus 3 ~y~C~~CGyvYd 14 (52)
T 1e8j_A 3 IYVCTVCGYEYD 14 (52)
T ss_dssp CEECSSSCCCCC
T ss_pred cEEeCCCCeEEc
Confidence 477888886653
No 265
>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...
Probab=68.68 E-value=2.2 Score=13.14 Aligned_cols=12 Identities=33% Similarity=0.700 Sum_probs=8.1
Q ss_pred ceeccccccccc
Q psy4412 6 LYACLWCDYHTL 17 (39)
Q Consensus 6 ~~~c~~c~~~~~ 17 (39)
.|.|..|+..+-
T Consensus 3 ~y~C~vCGyvYd 14 (54)
T 4rxn_A 3 KYTCTVCGYIYD 14 (54)
T ss_dssp CEEETTTCCEEC
T ss_pred ceECCCCCeEEC
Confidence 467888886553
No 266
>1dxg_A Desulforedoxin; non-heme iron protein, rubredoxin type metal center, electron transport; 1.80A {Desulfovibrio gigas} SCOP: g.41.5.2 PDB: 1dcd_A 1dhg_A 1cfw_A 2lk5_A 2lk6_A
Probab=67.66 E-value=2.3 Score=11.71 Aligned_cols=11 Identities=27% Similarity=0.760 Sum_probs=7.9
Q ss_pred ceecccccccc
Q psy4412 6 LYACLWCDYHT 16 (39)
Q Consensus 6 ~~~c~~c~~~~ 16 (39)
-|.|..|++..
T Consensus 6 fY~C~~CGniv 16 (36)
T 1dxg_A 6 VYKCELCGQVV 16 (36)
T ss_dssp EEECTTTCCEE
T ss_pred EEEcCCCCcEE
Confidence 47888887654
No 267
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=64.67 E-value=5.2 Score=14.70 Aligned_cols=10 Identities=10% Similarity=-0.210 Sum_probs=4.2
Q ss_pred HHHHhHHhcC
Q psy4412 22 MRDHIRRHTG 31 (39)
Q Consensus 22 ~~~~~~~~~~ 31 (39)
+..|..+..|
T Consensus 152 l~~H~~~~~~ 161 (170)
T 3hcs_A 152 KEIHDQNCPL 161 (170)
T ss_dssp HHHHHTTCCC
T ss_pred HHhHHHhCcC
Confidence 3444444443
No 268
>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}
Probab=64.38 E-value=2.8 Score=14.24 Aligned_cols=12 Identities=17% Similarity=0.562 Sum_probs=9.0
Q ss_pred ceeccccccccc
Q psy4412 6 LYACLWCDYHTL 17 (39)
Q Consensus 6 ~~~c~~c~~~~~ 17 (39)
-|.|+.|+.-|.
T Consensus 51 ~FkCP~CgEEFy 62 (95)
T 2k5c_A 51 VFKCPVCGEEFY 62 (95)
T ss_dssp EEECTTTCCEEE
T ss_pred hhcCCCccHHHh
Confidence 478999987664
No 269
>2v3b_B Rubredoxin 2, rubredoxin; alkane degradation, iron-sulfur protein, oxidoreductase, ELE transfer, electron transport, FAD, NAD, iron; HET: FAD; 2.45A {Pseudomonas aeruginosa}
Probab=64.15 E-value=2.6 Score=12.94 Aligned_cols=12 Identities=17% Similarity=0.587 Sum_probs=8.3
Q ss_pred ceeccccccccc
Q psy4412 6 LYACLWCDYHTL 17 (39)
Q Consensus 6 ~~~c~~c~~~~~ 17 (39)
.|.|..|+..+-
T Consensus 3 ~y~C~~CGyvYd 14 (55)
T 2v3b_B 3 KWQCVVCGFIYD 14 (55)
T ss_dssp EEEETTTCCEEE
T ss_pred cEEeCCCCeEEC
Confidence 467888886653
No 270
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}
Probab=63.86 E-value=2.6 Score=14.16 Aligned_cols=13 Identities=23% Similarity=0.749 Sum_probs=9.9
Q ss_pred cceeccccccccc
Q psy4412 5 YLYACLWCDYHTL 17 (39)
Q Consensus 5 ~~~~c~~c~~~~~ 17 (39)
..|.|..|+..+-
T Consensus 26 ~~y~C~vCGyvYD 38 (81)
T 2kn9_A 26 KLFRCIQCGFEYD 38 (81)
T ss_dssp CEEEETTTCCEEE
T ss_pred ceEEeCCCCEEEc
Confidence 3589999997664
No 271
>2lo3_A SAGA-associated factor 73; zinc-finger, deubiquitination, transcription factor, SAGA CO transcription; NMR {Saccharomyces cerevisiae}
Probab=63.69 E-value=3.4 Score=12.20 Aligned_cols=22 Identities=23% Similarity=0.442 Sum_probs=14.6
Q ss_pred eccccccccccchhHHHHhHHhc
Q psy4412 8 ACLWCDYHTLNSGHMRDHIRRHT 30 (39)
Q Consensus 8 ~c~~c~~~~~~~~~~~~~~~~~~ 30 (39)
.|..|++..... .+..|...|-
T Consensus 19 vC~~CgkPi~ls-AIvdHLenhC 40 (44)
T 2lo3_A 19 VCEKCGKPLALT-AIVDHLENHC 40 (44)
T ss_dssp ECTTTCCEEETT-THHHHHHHCC
T ss_pred hhcccCCcchHH-HHHHHHHHHh
Confidence 488899876544 4566766654
No 272
>2pzo_E CAP-Gly domain-containing linker protein 1; structural protein microtubule binding, dynactin, cytoskeleton associated protein, P150glued; 2.60A {Homo sapiens} PDB: 3e2u_E
Probab=63.12 E-value=2.4 Score=12.44 Aligned_cols=9 Identities=33% Similarity=0.914 Sum_probs=4.4
Q ss_pred Ccceeccccc
Q psy4412 4 TYLYACLWCD 13 (39)
Q Consensus 4 ~~~~~c~~c~ 13 (39)
++|| |..|.
T Consensus 19 eRpY-Cd~CE 27 (42)
T 2pzo_E 19 ERPY-CEICE 27 (42)
T ss_dssp --CE-ETTTT
T ss_pred CCcc-ccccc
Confidence 4565 66665
No 273
>2jrr_A Uncharacterized protein; solution structure, SIR90, structural genomics, PSI-2, protein structure initiative; NMR {Silicibacter pomeroyi}
Probab=63.01 E-value=3.4 Score=13.40 Aligned_cols=17 Identities=29% Similarity=0.587 Sum_probs=12.5
Q ss_pred Ccceeccccccccccch
Q psy4412 4 TYLYACLWCDYHTLNSG 20 (39)
Q Consensus 4 ~~~~~c~~c~~~~~~~~ 20 (39)
..+..|..|+..|....
T Consensus 38 ~g~~~CpYCg~~f~l~~ 54 (67)
T 2jrr_A 38 TGWVECPYCDCKYVLKG 54 (67)
T ss_dssp TSEEEETTTTEEEEETT
T ss_pred CCeEECCCCCCEEEECC
Confidence 35678999998886654
No 274
>1z60_A TFIIH basal transcription factor complex P44 subunit; basic transcription factor, zinc binding protein, ring finger; NMR {Homo sapiens} SCOP: g.49.1.2
Probab=61.72 E-value=0.76 Score=14.43 Aligned_cols=20 Identities=20% Similarity=0.257 Sum_probs=12.4
Q ss_pred eeccccccccccchhHHHHh
Q psy4412 7 YACLWCDYHTLNSGHMRDHI 26 (39)
Q Consensus 7 ~~c~~c~~~~~~~~~~~~~~ 26 (39)
|.|..|...|...-++-.|.
T Consensus 31 y~C~~C~~~FC~dCD~fiHe 50 (59)
T 1z60_A 31 YVCAVCQNVFCVDCDVFVHD 50 (59)
T ss_dssp ECCTTTTCCBCHHHHHTTTT
T ss_pred EECCccCcCcccchhHHHHh
Confidence 66777777776555544443
No 275
>1s24_A Rubredoxin 2; electron transport; NMR {Pseudomonas oleovorans} SCOP: g.41.5.1
Probab=60.02 E-value=3.1 Score=14.17 Aligned_cols=12 Identities=17% Similarity=0.371 Sum_probs=9.3
Q ss_pred ceeccccccccc
Q psy4412 6 LYACLWCDYHTL 17 (39)
Q Consensus 6 ~~~c~~c~~~~~ 17 (39)
.|.|..|+..+-
T Consensus 35 ~y~C~vCGyvYD 46 (87)
T 1s24_A 35 KWICITCGHIYD 46 (87)
T ss_dssp EEEETTTTEEEE
T ss_pred eEECCCCCeEec
Confidence 588999997654
No 276
>3ga8_A HTH-type transcriptional regulator MQSA (YGIT/B30; helix-turn-helix, Zn-binding protein, DNA-binding, transcrip transcription regulation; HET: PE4; 1.70A {Escherichia coli k-12} PDB: 3hi2_A
Probab=59.53 E-value=5.1 Score=12.90 Aligned_cols=17 Identities=18% Similarity=0.503 Sum_probs=12.3
Q ss_pred eeccccccccccchhHH
Q psy4412 7 YACLWCDYHTLNSGHMR 23 (39)
Q Consensus 7 ~~c~~c~~~~~~~~~~~ 23 (39)
+.|..|+..+.......
T Consensus 37 ~~C~~CGE~~~~~e~~~ 53 (78)
T 3ga8_A 37 LYCVHCEESIMNKEESD 53 (78)
T ss_dssp EEETTTCCEECCHHHHH
T ss_pred EECCCCCCEEECHHHHH
Confidence 57889998887665444
No 277
>1x4s_A Protein FON, zinc finger HIT domain containing protein 2; structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.85.1.2
Probab=59.02 E-value=5 Score=12.68 Aligned_cols=21 Identities=24% Similarity=0.371 Sum_probs=16.2
Q ss_pred ceeccccccccccchhHHHHh
Q psy4412 6 LYACLWCDYHTLNSGHMRDHI 26 (39)
Q Consensus 6 ~~~c~~c~~~~~~~~~~~~~~ 26 (39)
.|.|..|+-.+....-...|.
T Consensus 26 kY~CPrC~~rYCSl~C~k~Hk 46 (59)
T 1x4s_A 26 RYTCPRCNAPYCSLRCYRTHG 46 (59)
T ss_dssp CEECTTTCCEESSHHHHHHHC
T ss_pred cccCcCCCCCccChHHHHHHh
Confidence 588888888888777777664
No 278
>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2
Probab=58.97 E-value=5.8 Score=13.34 Aligned_cols=10 Identities=20% Similarity=0.644 Sum_probs=4.8
Q ss_pred eecccccccc
Q psy4412 7 YACLWCDYHT 16 (39)
Q Consensus 7 ~~c~~c~~~~ 16 (39)
|.|+.|+..+
T Consensus 11 F~C~~Cgd~l 20 (79)
T 1wjv_A 11 FTCNACGESV 20 (79)
T ss_dssp EEESSSCCEE
T ss_pred EEcCCCCCee
Confidence 4455555433
No 279
>1dx8_A Rubredoxin; electron transport, zinc-substitution; NMR {Guillardia theta} SCOP: g.41.5.1 PDB: 1h7v_A
Probab=58.80 E-value=3.7 Score=13.32 Aligned_cols=13 Identities=31% Similarity=0.496 Sum_probs=9.4
Q ss_pred cceeccccccccc
Q psy4412 5 YLYACLWCDYHTL 17 (39)
Q Consensus 5 ~~~~c~~c~~~~~ 17 (39)
..|.|..|+..+-
T Consensus 6 ~~y~C~vCGyiYd 18 (70)
T 1dx8_A 6 GKYECEACGYIYE 18 (70)
T ss_dssp SCEEETTTCCEEC
T ss_pred ceEEeCCCCEEEc
Confidence 3578999987654
No 280
>2jvm_A Uncharacterized protein; alpha+beta, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Rhodobacter sphaeroides 2}
Probab=57.94 E-value=5.8 Score=13.37 Aligned_cols=16 Identities=19% Similarity=0.538 Sum_probs=12.0
Q ss_pred cceeccccccccccch
Q psy4412 5 YLYACLWCDYHTLNSG 20 (39)
Q Consensus 5 ~~~~c~~c~~~~~~~~ 20 (39)
.+..|..|+..|....
T Consensus 52 g~~~CpYCg~~f~l~~ 67 (80)
T 2jvm_A 52 GFVECGYCDRRYIHES 67 (80)
T ss_dssp CEEECSSSSCEEEEHH
T ss_pred CeEECCCCCCEEEecC
Confidence 4568999998887654
No 281
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=57.73 E-value=4.4 Score=13.16 Aligned_cols=15 Identities=27% Similarity=0.388 Sum_probs=10.8
Q ss_pred cceeccccccccccc
Q psy4412 5 YLYACLWCDYHTLNS 19 (39)
Q Consensus 5 ~~~~c~~c~~~~~~~ 19 (39)
..|.|..|+..|...
T Consensus 27 v~Y~C~~CG~~~e~~ 41 (70)
T 1twf_L 27 LKYICAECSSKLSLS 41 (70)
T ss_dssp CCEECSSSCCEECCC
T ss_pred EEEECCCCCCcceeC
Confidence 357899999876543
No 282
>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}
Probab=56.66 E-value=4.4 Score=14.21 Aligned_cols=13 Identities=15% Similarity=0.105 Sum_probs=9.9
Q ss_pred ceecccccccccc
Q psy4412 6 LYACLWCDYHTLN 18 (39)
Q Consensus 6 ~~~c~~c~~~~~~ 18 (39)
-+.|..|+..|..
T Consensus 73 ~~~C~~CG~~~e~ 85 (119)
T 2kdx_A 73 ELECKDCSHVFKP 85 (119)
T ss_dssp EEECSSSSCEECS
T ss_pred eEEcCCCCCEEeC
Confidence 3789999987754
No 283
>2lcq_A Putative toxin VAPC6; PIN domain, Zn ribbon domain, ribosome biogenesis, metal BIN protein; NMR {Pyrococcus horikoshii}
Probab=55.36 E-value=4.3 Score=14.98 Aligned_cols=13 Identities=23% Similarity=0.580 Sum_probs=10.4
Q ss_pred ceecccccccccc
Q psy4412 6 LYACLWCDYHTLN 18 (39)
Q Consensus 6 ~~~c~~c~~~~~~ 18 (39)
-|.|..|++.|..
T Consensus 132 ~y~C~~Cg~~~~~ 144 (165)
T 2lcq_A 132 RYVCIGCGRKFST 144 (165)
T ss_dssp CEEESSSCCEESS
T ss_pred EEECCCCCCcccC
Confidence 5789999988864
No 284
>2yqq_A Zinc finger HIT domain-containing protein 3; structure genomics, ZF-HIT domain, TRIP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=55.02 E-value=6 Score=12.31 Aligned_cols=23 Identities=22% Similarity=0.352 Sum_probs=17.9
Q ss_pred ceeccccccccccchhHHHHhHH
Q psy4412 6 LYACLWCDYHTLNSGHMRDHIRR 28 (39)
Q Consensus 6 ~~~c~~c~~~~~~~~~~~~~~~~ 28 (39)
.|.|..|+-.+....-+..|...
T Consensus 23 kY~CPrC~~~yCSl~C~k~Hk~~ 45 (56)
T 2yqq_A 23 KYRCPACRVPYCSVVCFRKHKEQ 45 (56)
T ss_dssp SEECTTTCCEESSHHHHHHHHHH
T ss_pred eeeCCCCCCCeeCHHHHHHHHhh
Confidence 57888888888888777777654
No 285
>3iyl_X VP3; non-enveloped virus, membrane penetration protein, autocleav myristol group, icosahedral virus; HET: MYR; 3.30A {Grass carp reovirus} PDB: 3k1q_C 3k1q_B
Probab=53.03 E-value=2.9 Score=20.71 Aligned_cols=22 Identities=23% Similarity=0.561 Sum_probs=0.0
Q ss_pred ceeccccccccccchhHHHHhH
Q psy4412 6 LYACLWCDYHTLNSGHMRDHIR 27 (39)
Q Consensus 6 ~~~c~~c~~~~~~~~~~~~~~~ 27 (39)
.|.|.+|...|.....|..|.+
T Consensus 116 ~~~C~vC~a~F~S~~~L~~H~~ 137 (1214)
T 3iyl_X 116 SYVCNVCNARFSTMSALSEHLR 137 (1214)
T ss_dssp ----------------------
T ss_pred ceeehhhhhhcCCHHHHHHHHh
Confidence 5889999999999999999944
No 286
>1wff_A Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=52.33 E-value=7.5 Score=13.25 Aligned_cols=13 Identities=23% Similarity=0.562 Sum_probs=8.4
Q ss_pred ceeccccccccccc
Q psy4412 6 LYACLWCDYHTLNS 19 (39)
Q Consensus 6 ~~~c~~c~~~~~~~ 19 (39)
+|.|. |+..|...
T Consensus 40 ~f~Cr-Cg~~FC~~ 52 (85)
T 1wff_A 40 SFECR-CGNNFCAS 52 (85)
T ss_dssp CEECT-TCCEECTT
T ss_pred CeEcC-CCCEeccc
Confidence 56775 77777543
No 287
>1qyp_A RNA polymerase II; transcription, RPB9, Zn ribbon, hyperthermophilic, extremophIle; NMR {Thermococcus celer} SCOP: g.41.3.1
Probab=49.57 E-value=6.5 Score=11.84 Aligned_cols=10 Identities=30% Similarity=0.657 Sum_probs=6.3
Q ss_pred eecccccccc
Q psy4412 7 YACLWCDYHT 16 (39)
Q Consensus 7 ~~c~~c~~~~ 16 (39)
|.|..|+..+
T Consensus 44 y~C~~Cg~~w 53 (57)
T 1qyp_A 44 YKCTKCGHTW 53 (57)
T ss_dssp EEESSSCCEE
T ss_pred EEcCCCCCEe
Confidence 5677776544
No 288
>1loi_A Cyclic 3',5'-AMP specific phosphodiesterase RD1; hydrolase, C-AMP phosphodiesterase; NMR {Rattus norvegicus} SCOP: j.51.1.1
Probab=47.01 E-value=2.3 Score=10.75 Aligned_cols=10 Identities=20% Similarity=0.445 Sum_probs=6.0
Q ss_pred eecccccccc
Q psy4412 7 YACLWCDYHT 16 (39)
Q Consensus 7 ~~c~~c~~~~ 16 (39)
+-|..|++..
T Consensus 6 ffcetcskpw 15 (26)
T 1loi_A 6 FFCETCSKPW 15 (26)
T ss_dssp HHHHTSSCTT
T ss_pred HHHHhcCCch
Confidence 4566777654
No 289
>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubre like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A
Probab=46.64 E-value=7 Score=15.00 Aligned_cols=12 Identities=25% Similarity=0.595 Sum_probs=9.2
Q ss_pred ceeccccccccc
Q psy4412 6 LYACLWCDYHTL 17 (39)
Q Consensus 6 ~~~c~~c~~~~~ 17 (39)
-|.|..||..+.
T Consensus 155 ~~~C~~CG~~~~ 166 (191)
T 1lko_A 155 KWRCRNCGYVHE 166 (191)
T ss_dssp EEEETTTCCEEE
T ss_pred eEEECCCCCEee
Confidence 478999997653
No 290
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=44.39 E-value=12 Score=14.18 Aligned_cols=13 Identities=31% Similarity=0.912 Sum_probs=9.4
Q ss_pred cceeccccccccc
Q psy4412 5 YLYACLWCDYHTL 17 (39)
Q Consensus 5 ~~~~c~~c~~~~~ 17 (39)
.-|.|..||..+.
T Consensus 137 ~~~~C~~CG~i~~ 149 (170)
T 3pwf_A 137 KVYICPICGYTAV 149 (170)
T ss_dssp CEEECTTTCCEEE
T ss_pred CeeEeCCCCCeeC
Confidence 3478999987653
No 291
>1wfl_A Zinc finger protein 216; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=43.03 E-value=12 Score=12.41 Aligned_cols=12 Identities=17% Similarity=0.409 Sum_probs=6.8
Q ss_pred ceecccccccccc
Q psy4412 6 LYACLWCDYHTLN 18 (39)
Q Consensus 6 ~~~c~~c~~~~~~ 18 (39)
++.|. |+..|..
T Consensus 39 gf~Cr-Cg~~FCs 50 (74)
T 1wfl_A 39 GFDCR-CGNLFCG 50 (74)
T ss_dssp CEECT-TSCEECS
T ss_pred CeecC-CCCEech
Confidence 35566 6665543
No 292
>1tfi_A Transcriptional elongation factor SII; transcription regulation; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=42.86 E-value=8.9 Score=11.46 Aligned_cols=9 Identities=22% Similarity=0.520 Sum_probs=5.3
Q ss_pred eeccccccc
Q psy4412 7 YACLWCDYH 15 (39)
Q Consensus 7 ~~c~~c~~~ 15 (39)
|.|..|+..
T Consensus 38 y~C~~Cg~~ 46 (50)
T 1tfi_A 38 VVCNECGNR 46 (50)
T ss_dssp EEESSSCCE
T ss_pred EEcCCCCCe
Confidence 566666654
No 293
>3jyw_9 60S ribosomal protein L43; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus}
Probab=42.75 E-value=8.8 Score=12.64 Aligned_cols=10 Identities=30% Similarity=0.946 Sum_probs=6.6
Q ss_pred ceeccccccc
Q psy4412 6 LYACLWCDYH 15 (39)
Q Consensus 6 ~~~c~~c~~~ 15 (39)
.|.|..|++.
T Consensus 26 ky~C~fCgk~ 35 (72)
T 3jyw_9 26 RYDCSFCGKK 35 (72)
T ss_dssp CBCCSSCCSS
T ss_pred CccCCCCCCc
Confidence 4677777754
No 294
>4a17_Y RPL37A, 60S ribosomal protein L32; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_Y 4a1c_Y 4a1e_Y
Probab=42.13 E-value=11 Score=13.37 Aligned_cols=9 Identities=33% Similarity=1.054 Sum_probs=4.8
Q ss_pred ceecccccc
Q psy4412 6 LYACLWCDY 14 (39)
Q Consensus 6 ~~~c~~c~~ 14 (39)
.|.|..|++
T Consensus 36 ky~CpfCgk 44 (103)
T 4a17_Y 36 KYGCPFCGK 44 (103)
T ss_dssp CEECTTTCC
T ss_pred CCCCCCCCC
Confidence 355666554
No 295
>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=41.82 E-value=12 Score=12.03 Aligned_cols=12 Identities=17% Similarity=0.401 Sum_probs=7.6
Q ss_pred ceecccccccccc
Q psy4412 6 LYACLWCDYHTLN 18 (39)
Q Consensus 6 ~~~c~~c~~~~~~ 18 (39)
+|.| .|+..|..
T Consensus 29 ~f~C-rCg~~FC~ 40 (64)
T 1wg2_A 29 GFKC-KCGSTFCG 40 (64)
T ss_dssp CEEC-TTSCEECS
T ss_pred CeEe-ecCCEecc
Confidence 4667 57776654
No 296
>3j21_i 50S ribosomal protein L37AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=41.77 E-value=9.3 Score=12.96 Aligned_cols=10 Identities=20% Similarity=0.444 Sum_probs=6.0
Q ss_pred ceeccccccc
Q psy4412 6 LYACLWCDYH 15 (39)
Q Consensus 6 ~~~c~~c~~~ 15 (39)
.|.|..|++.
T Consensus 35 ky~CpfCGk~ 44 (83)
T 3j21_i 35 KHTCPVCGRK 44 (83)
T ss_dssp CBCCSSSCSS
T ss_pred ccCCCCCCCc
Confidence 4567776653
No 297
>3by4_A OTU1, ubiquitin thioesterase OTU1; ubiquitin hydrolase, deubiquitinase, cell cycle, hydrolase; 1.55A {Saccharomyces cerevisiae} PDB: 3c0r_A
Probab=41.14 E-value=5.7 Score=15.59 Aligned_cols=21 Identities=14% Similarity=0.292 Sum_probs=0.0
Q ss_pred cceeccccccccccchhHHHH
Q psy4412 5 YLYACLWCDYHTLNSGHMRDH 25 (39)
Q Consensus 5 ~~~~c~~c~~~~~~~~~~~~~ 25 (39)
....|..|++.+........|
T Consensus 179 ~~l~C~~C~~~~~g~~~a~~h 199 (212)
T 3by4_A 179 AQIKCNTCQMTFVGEREVARH 199 (212)
T ss_dssp ---------------------
T ss_pred eEEEcccCCCcccCHHHHHHH
Confidence 346799999888765554444
No 298
>3e2u_E CAP-Gly domain-containing linker protein 1; structural protein microtubule binding, dynactin, cytoskelet associated protein, P150glued; 2.60A {Homo sapiens}
Probab=40.99 E-value=10 Score=11.17 Aligned_cols=9 Identities=33% Similarity=0.914 Sum_probs=4.5
Q ss_pred Ccceeccccc
Q psy4412 4 TYLYACLWCD 13 (39)
Q Consensus 4 ~~~~~c~~c~ 13 (39)
++|| |..|.
T Consensus 19 eRpY-Ce~CE 27 (42)
T 3e2u_E 19 ERPY-CEICE 27 (42)
T ss_dssp -CCE-ETTTT
T ss_pred cCcc-cccce
Confidence 3555 56554
No 299
>2pq8_A Probable histone acetyltransferase MYST1; MOF, structural genomics, structural genomics consortium, SGC; HET: COA; 1.45A {Homo sapiens} PDB: 2giv_A* 3qah_A* 2y0m_A* 3toa_A* 3tob_A*
Probab=40.93 E-value=23 Score=14.94 Aligned_cols=26 Identities=19% Similarity=0.304 Sum_probs=21.2
Q ss_pred cceeccccccccccchhHHHHhHHhc
Q psy4412 5 YLYACLWCDYHTLNSGHMRDHIRRHT 30 (39)
Q Consensus 5 ~~~~c~~c~~~~~~~~~~~~~~~~~~ 30 (39)
..|.|..|-+-+.....+..|+....
T Consensus 35 ~lyiCe~Clky~~~~~~~~~H~~~C~ 60 (278)
T 2pq8_A 35 KLWLCEYCLKYMKYEKSYRFHLGQCQ 60 (278)
T ss_dssp CEEECTTTCCEESCHHHHHHHHHHCC
T ss_pred EEEEccchhhhhCCHHHHHHHHhhCC
Confidence 46889999999999999999876543
No 300
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=40.88 E-value=9.7 Score=13.04 Aligned_cols=10 Identities=20% Similarity=0.461 Sum_probs=7.6
Q ss_pred eccccccccc
Q psy4412 8 ACLWCDYHTL 17 (39)
Q Consensus 8 ~c~~c~~~~~ 17 (39)
.|++|+....
T Consensus 49 ~CPvCgs~l~ 58 (112)
T 1l8d_A 49 KCPVCGRELT 58 (112)
T ss_dssp ECTTTCCEEC
T ss_pred CCCCCCCcCC
Confidence 5999987654
No 301
>1fiw_L Beta-acrosin light chain; anti-parallel beta-barrel, hydrolase; HET: NAG FUL BMA MAN PBZ; 2.10A {Ovis aries} SCOP: b.47.1.2
Probab=40.71 E-value=8.6 Score=9.99 Aligned_cols=8 Identities=13% Similarity=0.347 Sum_probs=5.0
Q ss_pred cccccccc
Q psy4412 12 CDYHTLNS 19 (39)
Q Consensus 12 c~~~~~~~ 19 (39)
|+..|.+.
T Consensus 9 CGlrfrqn 16 (26)
T 1fiw_L 9 CGVRFRQN 16 (26)
T ss_pred cCceeccC
Confidence 77666554
No 302
>1lv3_A Hypothetical protein YACG; zinc finger, rubredoxin knuckle, C4 tetrahedral Zn+2, antiparallel beta strand and alpha helix, NESG project; NMR {Escherichia coli} SCOP: g.39.1.9
Probab=40.67 E-value=10 Score=12.35 Aligned_cols=11 Identities=18% Similarity=0.465 Sum_probs=8.8
Q ss_pred eeccccccccc
Q psy4412 7 YACLWCDYHTL 17 (39)
Q Consensus 7 ~~c~~c~~~~~ 17 (39)
..|..|++.+.
T Consensus 10 ~~CP~Cgkp~~ 20 (68)
T 1lv3_A 10 VNCPTCGKTVV 20 (68)
T ss_dssp EECTTTCCEEE
T ss_pred CcCCCCCCccc
Confidence 57999998775
No 303
>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...
Probab=40.43 E-value=11 Score=12.71 Aligned_cols=10 Identities=40% Similarity=1.324 Sum_probs=6.7
Q ss_pred eecccccccc
Q psy4412 7 YACLWCDYHT 16 (39)
Q Consensus 7 ~~c~~c~~~~ 16 (39)
+.|..|+..|
T Consensus 46 W~C~~Cg~~~ 55 (83)
T 1vq8_Z 46 WQCSYCDYKF 55 (83)
T ss_dssp EEETTTCCEE
T ss_pred EECCCCCCEe
Confidence 5677777654
No 304
>2ct5_A Zinc finger BED domain containing protein 1; DREF homolog, putative C-like transposable element, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.6
Probab=40.30 E-value=13 Score=12.10 Aligned_cols=24 Identities=13% Similarity=0.343 Sum_probs=15.6
Q ss_pred eecccccccccc---chhHHHHhHHhc
Q psy4412 7 YACLWCDYHTLN---SGHMRDHIRRHT 30 (39)
Q Consensus 7 ~~c~~c~~~~~~---~~~~~~~~~~~~ 30 (39)
-.|..|.+.+.. -+.|..|++...
T Consensus 30 a~Ck~C~~~l~~~g~TSnL~rHL~~~H 56 (73)
T 2ct5_A 30 IYCRICMAQIAYSGNTSNLSYHLEKNH 56 (73)
T ss_dssp CEETTTTEECCCCSSTHHHHHHHHHSC
T ss_pred EECCCCCccccCCCChHhHHHHHHHHC
Confidence 468889876542 356777876443
No 305
>3iz5_m 60S ribosomal protein L43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_m 1ysh_D 2zkr_z
Probab=39.66 E-value=10 Score=13.14 Aligned_cols=9 Identities=33% Similarity=0.933 Sum_probs=5.0
Q ss_pred ceecccccc
Q psy4412 6 LYACLWCDY 14 (39)
Q Consensus 6 ~~~c~~c~~ 14 (39)
.|.|..|++
T Consensus 36 ky~CpfCgk 44 (92)
T 3iz5_m 36 KYFCEFCGK 44 (92)
T ss_dssp CBCCTTTCS
T ss_pred cccCcccCC
Confidence 355666654
No 306
>1fiz_L Beta-acrosin light chain; anti-parallel beta-barrel, hydrolase; HET: NDG FUL BMA PBZ; 2.90A {Sus scrofa} SCOP: b.47.1.2
Probab=38.99 E-value=9.4 Score=9.94 Aligned_cols=12 Identities=17% Similarity=0.354 Sum_probs=6.7
Q ss_pred eccc-cccccccc
Q psy4412 8 ACLW-CDYHTLNS 19 (39)
Q Consensus 8 ~c~~-c~~~~~~~ 19 (39)
.|+. |+..|.+.
T Consensus 5 tcdgpCGlrfrqn 17 (26)
T 1fiz_L 5 TCDGPCGLRFRQK 17 (26)
T ss_pred cccccccceeccC
Confidence 3444 77777554
No 307
>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=38.91 E-value=15 Score=12.22 Aligned_cols=12 Identities=17% Similarity=0.454 Sum_probs=7.4
Q ss_pred ceecccccccccc
Q psy4412 6 LYACLWCDYHTLN 18 (39)
Q Consensus 6 ~~~c~~c~~~~~~ 18 (39)
+|.| .|+..|..
T Consensus 39 ~f~C-rCg~~FCs 50 (74)
T 1wfp_A 39 GFKC-RCGSTFCG 50 (74)
T ss_dssp CEEC-TTSCEECT
T ss_pred ceEe-ccCCEecc
Confidence 4666 47766654
No 308
>1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1
Probab=38.82 E-value=14 Score=11.78 Aligned_cols=11 Identities=18% Similarity=0.150 Sum_probs=6.0
Q ss_pred eeccccccccc
Q psy4412 7 YACLWCDYHTL 17 (39)
Q Consensus 7 ~~c~~c~~~~~ 17 (39)
+.|..||..|.
T Consensus 28 HHCR~CG~v~C 38 (73)
T 1vfy_A 28 HHCRSCGGVFC 38 (73)
T ss_dssp EECTTTCCEEC
T ss_pred ccCCCCCEEEc
Confidence 45556665553
No 309
>3izc_m 60S ribosomal protein RPL43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins; NMR {Saccharomyces cerevisiae} PDB: 3izs_m 3o58_g 3o5h_g 3u5e_p 3u5i_p 4b6a_p 1s1i_9
Probab=38.01 E-value=11 Score=13.08 Aligned_cols=9 Identities=33% Similarity=1.029 Sum_probs=5.0
Q ss_pred ceecccccc
Q psy4412 6 LYACLWCDY 14 (39)
Q Consensus 6 ~~~c~~c~~ 14 (39)
.|.|..|++
T Consensus 36 ky~CpfCgk 44 (92)
T 3izc_m 36 RYDCSFCGK 44 (92)
T ss_dssp CCCCSSSCS
T ss_pred CCcCCCCCC
Confidence 355666654
No 310
>1twf_J DNA-directed RNA polymerases I, II, and III 8.3 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: a.4.11.1 PDB: 1i3q_J 1i6h_J 1k83_J* 1nik_J 1nt9_J 1pqv_J 1r5u_J 1r9s_J* 1r9t_J* 1sfo_J* 1twa_J* 1twc_J* 1i50_J* 1twg_J* 1twh_J* 1wcm_J 1y1v_J 1y1w_J 1y1y_J 1y77_J* ...
Probab=37.65 E-value=16 Score=12.04 Aligned_cols=15 Identities=13% Similarity=0.235 Sum_probs=11.0
Q ss_pred cceeccccccccccc
Q psy4412 5 YLYACLWCDYHTLNS 19 (39)
Q Consensus 5 ~~~~c~~c~~~~~~~ 19 (39)
.|..|-.||+.....
T Consensus 3 iPVRCFTCGkvi~~~ 17 (70)
T 1twf_J 3 VPVRCFSCGKVVGDK 17 (70)
T ss_dssp CCSBCTTTCCBCTTC
T ss_pred CCeecCCCCCChHHH
Confidence 467888899877654
No 311
>3eph_A TRNA isopentenyltransferase; transferase, alternative initiation, ATP-binding, cytoplasm, mitochondrion, nucleotide-binding, nucleus; 2.95A {Saccharomyces cerevisiae} PDB: 3epj_A 3epk_A* 3epl_A*
Probab=36.82 E-value=19 Score=15.89 Aligned_cols=23 Identities=17% Similarity=0.359 Sum_probs=14.6
Q ss_pred cceecccccc------ccccchhHHHHhH
Q psy4412 5 YLYACLWCDY------HTLNSGHMRDHIR 27 (39)
Q Consensus 5 ~~~~c~~c~~------~~~~~~~~~~~~~ 27 (39)
+.+.|..|.. .+........|.+
T Consensus 359 ~~~~Ce~C~~~~~~~~~~~ge~~W~~H~k 387 (409)
T 3eph_A 359 THYTCNVCRNADGKNVVAIGEKYWKIHLG 387 (409)
T ss_dssp CEEEEEEEECTTSCEEEEESHHHHHHHHT
T ss_pred cceeCCCCCCCCCCcceEEcHHHHHHHhh
Confidence 3478999997 4555555555543
No 312
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=36.45 E-value=22 Score=13.93 Aligned_cols=13 Identities=15% Similarity=0.135 Sum_probs=7.5
Q ss_pred ceecccccccccc
Q psy4412 6 LYACLWCDYHTLN 18 (39)
Q Consensus 6 ~~~c~~c~~~~~~ 18 (39)
.+.|..||..|..
T Consensus 177 rhhCr~CG~v~C~ 189 (220)
T 1dvp_A 177 KHHCRNCGQVFCG 189 (220)
T ss_dssp CEECTTTCCEECS
T ss_pred ccccCCcCCEECh
Confidence 3556666665544
No 313
>2ou2_A Histone acetyltransferase htatip; structural genomics, structural genomics consortium, SGC; HET: ALY ACO; 2.30A {Homo sapiens}
Probab=36.20 E-value=29 Score=14.69 Aligned_cols=26 Identities=19% Similarity=0.414 Sum_probs=21.0
Q ss_pred CcceeccccccccccchhHHHHhHHh
Q psy4412 4 TYLYACLWCDYHTLNSGHMRDHIRRH 29 (39)
Q Consensus 4 ~~~~~c~~c~~~~~~~~~~~~~~~~~ 29 (39)
...|.|..|-+-+.....+..|+...
T Consensus 32 ~~lyiCe~Clky~~~~~~~~~H~~~C 57 (280)
T 2ou2_A 32 PVLYLCEFCLKYGRSLKCLQRHLTKC 57 (280)
T ss_dssp SCEEECTTTCCEESCHHHHHHHHHHC
T ss_pred CeEEECcchhhhhCCHHHHHHHHhhC
Confidence 34688999999999889999887644
No 314
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=36.03 E-value=20 Score=12.85 Aligned_cols=12 Identities=17% Similarity=0.213 Sum_probs=6.6
Q ss_pred eecccccccccc
Q psy4412 7 YACLWCDYHTLN 18 (39)
Q Consensus 7 ~~c~~c~~~~~~ 18 (39)
+.|..||..|..
T Consensus 86 HHCR~CG~vfC~ 97 (125)
T 1joc_A 86 HHCRQCGNIFCA 97 (125)
T ss_dssp EECTTTCCEECG
T ss_pred ccCCCCCeEECh
Confidence 456666655543
No 315
>3to7_A Histone acetyltransferase ESA1; MYST family; HET: ALY COA; 1.90A {Saccharomyces cerevisiae} SCOP: d.108.1.1 PDB: 3to6_A* 1fy7_A* 1mja_A* 1mjb_A* 3to9_A* 1mj9_A*
Probab=36.02 E-value=29 Score=14.67 Aligned_cols=25 Identities=4% Similarity=-0.023 Sum_probs=20.0
Q ss_pred CcceeccccccccccchhHHHHhHH
Q psy4412 4 TYLYACLWCDYHTLNSGHMRDHIRR 28 (39)
Q Consensus 4 ~~~~~c~~c~~~~~~~~~~~~~~~~ 28 (39)
...|.|..|-+-+.....+..|+..
T Consensus 34 ~~lyiCe~ClkY~~~~~~~~~H~~~ 58 (276)
T 3to7_A 34 DFIYIDDFTLQYFGSKKQYERYRKK 58 (276)
T ss_dssp CEEEECTTTCCEESSHHHHHHHHTS
T ss_pred CeEEEccchhhhcCCHHHHHHHhcc
Confidence 3458899999988888888888653
No 316
>1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1
Probab=35.31 E-value=20 Score=12.92 Aligned_cols=12 Identities=25% Similarity=0.401 Sum_probs=6.5
Q ss_pred eecccccccccc
Q psy4412 7 YACLWCDYHTLN 18 (39)
Q Consensus 7 ~~c~~c~~~~~~ 18 (39)
..|..||..|..
T Consensus 36 HHCR~CG~ifC~ 47 (120)
T 1y02_A 36 QTCLDCKKNFCM 47 (120)
T ss_dssp EECTTTCCEECG
T ss_pred ccCCCCCCeeCH
Confidence 455666655543
No 317
>3a43_A HYPD, hydrogenase nickel incorporation protein HYPA; [NIFE] hydrogenase maturation, zinc-finger, nickel binding, metal-binding; HET: FME; 2.30A {Pyrococcus kodakaraensis} PDB: 3a44_A*
Probab=34.63 E-value=14 Score=13.50 Aligned_cols=12 Identities=25% Similarity=0.659 Sum_probs=9.2
Q ss_pred eecccccccccc
Q psy4412 7 YACLWCDYHTLN 18 (39)
Q Consensus 7 ~~c~~c~~~~~~ 18 (39)
+.|..|+..|..
T Consensus 71 ~~C~~CG~~~~~ 82 (139)
T 3a43_A 71 FKCRNCNYEWKL 82 (139)
T ss_dssp EEETTTCCEEEG
T ss_pred EECCCCCCEEec
Confidence 679999887654
No 318
>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A*
Probab=34.55 E-value=14 Score=10.50 Aligned_cols=12 Identities=17% Similarity=0.135 Sum_probs=6.6
Q ss_pred cceecccccccc
Q psy4412 5 YLYACLWCDYHT 16 (39)
Q Consensus 5 ~~~~c~~c~~~~ 16 (39)
.|-.|..|++..
T Consensus 10 ~pt~C~~C~~~l 21 (50)
T 1ptq_A 10 SPTFCDHCGSLL 21 (50)
T ss_dssp SCCBCTTTCCBC
T ss_pred CCCCcCCCCcee
Confidence 445566666543
No 319
>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=34.52 E-value=17 Score=11.69 Aligned_cols=12 Identities=17% Similarity=0.445 Sum_probs=7.4
Q ss_pred ceecccccccccc
Q psy4412 6 LYACLWCDYHTLN 18 (39)
Q Consensus 6 ~~~c~~c~~~~~~ 18 (39)
+|.| .|+..|..
T Consensus 29 ~f~C-rCg~~FC~ 40 (64)
T 1wfh_A 29 GFMC-RCGTTFCG 40 (64)
T ss_dssp CEEC-SSSCEECT
T ss_pred CEEe-ecCCEecc
Confidence 4667 47776654
No 320
>1ffk_W Ribosomal protein L37AE; ribosome assembly, RNA-RNA, protein-RNA, protein-protein; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1jj2_Y 1k73_1* 1k8a_1* 1k9m_1* 1kc8_1* 1kd1_1* 1kqs_Y* 1m1k_1* 1m90_1* 1n8r_1* 1nji_1* 1q7y_1* 1q81_1* 1q82_1* 1q86_1* 1qvf_Y 1qvg_Y 1w2b_Y 3cxc_Y*
Probab=34.52 E-value=13 Score=12.26 Aligned_cols=9 Identities=33% Similarity=1.058 Sum_probs=6.1
Q ss_pred ceecccccc
Q psy4412 6 LYACLWCDY 14 (39)
Q Consensus 6 ~~~c~~c~~ 14 (39)
.|.|..|++
T Consensus 27 ky~C~fCgk 35 (73)
T 1ffk_W 27 KYKCPVCGF 35 (73)
T ss_pred CccCCCCCC
Confidence 466777775
No 321
>1vzi_A Desulfoferrodoxin; ferrocyanide, microspectrophotometry, redox states, photoreduction, dinuclear iron cluster, oxidoreductase; 1.15A {Desulfovibrio baarsii} SCOP: b.1.13.1 g.41.5.2 PDB: 1vzh_A* 1vzg_A 2ji1_A 2ji2_A 2ji3_A 1dfx_A
Probab=34.37 E-value=16 Score=13.20 Aligned_cols=11 Identities=27% Similarity=0.706 Sum_probs=7.9
Q ss_pred ceecccccccc
Q psy4412 6 LYACLWCDYHT 16 (39)
Q Consensus 6 ~~~c~~c~~~~ 16 (39)
-|.|..|++..
T Consensus 7 fYkC~~CGniv 17 (126)
T 1vzi_A 7 VYKCEVCGNIV 17 (126)
T ss_dssp EEECTTTCCEE
T ss_pred EEEcCCCCeEE
Confidence 47888887754
No 322
>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=34.19 E-value=18 Score=11.84 Aligned_cols=12 Identities=17% Similarity=0.343 Sum_probs=6.5
Q ss_pred eecccccccccc
Q psy4412 7 YACLWCDYHTLN 18 (39)
Q Consensus 7 ~~c~~c~~~~~~ 18 (39)
..|..|+..|..
T Consensus 31 HHCR~CG~vfC~ 42 (84)
T 1x4u_A 31 RSCSNCGNSFCS 42 (84)
T ss_dssp EECSSSCCEECT
T ss_pred hhhcCCCcEECh
Confidence 456666655543
No 323
>2jyp_A Aragonite protein AP7; protein C-terminal fragment, unknown function; NMR {Synthetic}
Probab=33.85 E-value=13 Score=10.05 Aligned_cols=10 Identities=20% Similarity=0.637 Sum_probs=4.6
Q ss_pred Ccce-eccccc
Q psy4412 4 TYLY-ACLWCD 13 (39)
Q Consensus 4 ~~~~-~c~~c~ 13 (39)
.+|| +|-.|-
T Consensus 6 rrpfhecalcy 16 (36)
T 2jyp_A 6 RRPFHECALCY 16 (36)
T ss_dssp TTTTTCCSSST
T ss_pred cCccchheeEE
Confidence 4454 455553
No 324
>2l8e_A Polyhomeotic-like protein 1; DNA binding protein; NMR {Homo sapiens}
Probab=33.52 E-value=16 Score=10.99 Aligned_cols=12 Identities=17% Similarity=0.492 Sum_probs=8.8
Q ss_pred eecccccccccc
Q psy4412 7 YACLWCDYHTLN 18 (39)
Q Consensus 7 ~~c~~c~~~~~~ 18 (39)
..|..|++.+..
T Consensus 19 ~~C~~CG~~i~~ 30 (49)
T 2l8e_A 19 LKCEYCGKYAPA 30 (49)
T ss_dssp EECTTTCCEEEG
T ss_pred CcChhccCcccc
Confidence 469999986653
No 325
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=33.19 E-value=18 Score=11.57 Aligned_cols=14 Identities=21% Similarity=0.494 Sum_probs=9.9
Q ss_pred cceecccccccccc
Q psy4412 5 YLYACLWCDYHTLN 18 (39)
Q Consensus 5 ~~~~c~~c~~~~~~ 18 (39)
..|.|..|+..+..
T Consensus 20 v~Y~C~~Cg~~~~l 33 (63)
T 3h0g_L 20 MIYLCADCGARNTI 33 (63)
T ss_dssp CCCBCSSSCCBCCC
T ss_pred eEEECCCCCCeeec
Confidence 34889999876643
No 326
>2ozu_A Histone acetyltransferase MYST3; structural genomics, structural G consortium, SGC; HET: ALY ACO; 2.30A {Homo sapiens} SCOP: d.108.1.1 PDB: 2rc4_A* 1m36_A
Probab=32.69 E-value=34 Score=14.53 Aligned_cols=25 Identities=20% Similarity=0.487 Sum_probs=20.4
Q ss_pred cceeccccccccccchhHHHHhHHh
Q psy4412 5 YLYACLWCDYHTLNSGHMRDHIRRH 29 (39)
Q Consensus 5 ~~~~c~~c~~~~~~~~~~~~~~~~~ 29 (39)
..|.|..|-+-+.....+..|+...
T Consensus 40 ~lyiCe~Clky~~~~~~~~~H~~~C 64 (284)
T 2ozu_A 40 KLYLCEFCLKYMKSRTILQQHMKKC 64 (284)
T ss_dssp EEEECTTTCCEESSHHHHHHHHHHC
T ss_pred cEEEchhhHhHhCCHHHHHHHhccC
Confidence 4588999999888888899887643
No 327
>3cc2_Z 50S ribosomal protein L37AE, 50S ribosomal protein L32E; genomic sequnece for R-proteins, ribonucleoprotein, ribosoma protein, RNA-binding; HET: 1MA OMU OMG UR3 PSU; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 3cc4_Z* 3cc7_Z* 3cce_Z* 3ccj_Z* 3ccl_Z* 3ccm_Z* 3ccq_Z* 3ccr_Z* 3ccs_Z* 3ccu_Z* 3ccv_Z* 3cd6_Z* 3cma_Z* 3cme_Z* 3i55_Z* 3i56_Z* 3cpw_Y* 4adx_Z
Probab=31.91 E-value=17 Score=13.19 Aligned_cols=10 Identities=40% Similarity=1.324 Sum_probs=6.8
Q ss_pred eecccccccc
Q psy4412 7 YACLWCDYHT 16 (39)
Q Consensus 7 ~~c~~c~~~~ 16 (39)
+.|..|++.|
T Consensus 79 W~C~~Cgk~f 88 (116)
T 3cc2_Z 79 WQCSYCDYKF 88 (116)
T ss_dssp EEETTTCCEE
T ss_pred EECCCCCCEE
Confidence 5677777654
No 328
>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A
Probab=31.85 E-value=20 Score=11.68 Aligned_cols=11 Identities=18% Similarity=0.190 Sum_probs=5.7
Q ss_pred eeccccccccc
Q psy4412 7 YACLWCDYHTL 17 (39)
Q Consensus 7 ~~c~~c~~~~~ 17 (39)
+.|..||..|.
T Consensus 36 HHCR~CG~v~C 46 (82)
T 2yw8_A 36 HHCRNCGHIFC 46 (82)
T ss_dssp EECTTTCCEEC
T ss_pred ccCCCCCCEEC
Confidence 44555555543
No 329
>1hcw_A BBA1; growth response protein, de novo protein design, supersecondary motif; HET: PYA; NMR {} SCOP: k.14.1.1 PDB: 1t8j_A*
Probab=31.41 E-value=13 Score=9.32 Aligned_cols=19 Identities=21% Similarity=0.322 Sum_probs=12.6
Q ss_pred ccccccchhHHHHhHHhcC
Q psy4412 13 DYHTLNSGHMRDHIRRHTG 31 (39)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~ 31 (39)
+..|..+..+..-.+.|.+
T Consensus 6 s~tfsrsdelakllrlhag 24 (26)
T 1hcw_A 6 SXTFSRSDELAKLLRLHAG 24 (26)
T ss_dssp SCCCSSSHHHHHHHHHCCC
T ss_pred cccccccHHHHHHHHHhcc
Confidence 3456666777777777765
No 330
>2ds5_A CLPX, ATP-dependent CLP protease ATP-binding subunit CLPX; treble cleft zinc finger, metal binding protein, protein binding; HET: PG4; 1.50A {Escherichia coli} SCOP: g.39.1.11 PDB: 2ds6_A 2ds8_A 2ds7_A
Probab=30.69 E-value=19 Score=10.92 Aligned_cols=11 Identities=18% Similarity=0.552 Sum_probs=7.8
Q ss_pred eeccccccccc
Q psy4412 7 YACLWCDYHTL 17 (39)
Q Consensus 7 ~~c~~c~~~~~ 17 (39)
..|..|++.-.
T Consensus 12 ~~CSFCGk~~~ 22 (51)
T 2ds5_A 12 LYCSFCGKSQH 22 (51)
T ss_dssp CBCTTTCCBTT
T ss_pred cEecCCCCCHH
Confidence 46888987543
No 331
>1yop_A KTI11P; zinc finger, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: g.41.17.1 PDB: 1yws_A
Probab=30.65 E-value=17 Score=12.28 Aligned_cols=14 Identities=21% Similarity=0.299 Sum_probs=8.4
Q ss_pred ceeccccccccccch
Q psy4412 6 LYACLWCDYHTLNSG 20 (39)
Q Consensus 6 ~~~c~~c~~~~~~~~ 20 (39)
.|.|. ||..|.-..
T Consensus 23 ~ypCr-CGd~F~it~ 36 (83)
T 1yop_A 23 TYPCP-CGDRFQIYL 36 (83)
T ss_dssp EEEET-TTEEEEEEH
T ss_pred EEeCC-CCCeEEECH
Confidence 35676 777665443
No 332
>1ovx_A ATP-dependent CLP protease ATP-binding subunit CL; treble CLEF zinc finger, homodimer, metal binding protein; NMR {Escherichia coli} SCOP: g.39.1.11
Probab=30.48 E-value=18 Score=11.76 Aligned_cols=10 Identities=20% Similarity=0.670 Sum_probs=6.9
Q ss_pred eecccccccc
Q psy4412 7 YACLWCDYHT 16 (39)
Q Consensus 7 ~~c~~c~~~~ 16 (39)
..|..|++.-
T Consensus 19 ~~CSFCGK~e 28 (67)
T 1ovx_A 19 LYCSFCGKSQ 28 (67)
T ss_dssp CCCTTTCCCT
T ss_pred cEecCCCCCH
Confidence 4688888754
No 333
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=30.08 E-value=29 Score=13.78 Aligned_cols=12 Identities=17% Similarity=0.199 Sum_probs=6.6
Q ss_pred eecccccccccc
Q psy4412 7 YACLWCDYHTLN 18 (39)
Q Consensus 7 ~~c~~c~~~~~~ 18 (39)
+.|..||..|..
T Consensus 181 hHCR~CG~v~C~ 192 (226)
T 3zyq_A 181 HHCRACGQIFCG 192 (226)
T ss_dssp EECTTTCCEECT
T ss_pred cccCCCcCEeCh
Confidence 456666655543
No 334
>2jz8_A Uncharacterized protein BH09830; zinc binding, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Bartonella henselae str}
Probab=29.64 E-value=19 Score=12.38 Aligned_cols=17 Identities=12% Similarity=0.124 Sum_probs=12.0
Q ss_pred cceeccccccccccchh
Q psy4412 5 YLYACLWCDYHTLNSGH 21 (39)
Q Consensus 5 ~~~~c~~c~~~~~~~~~ 21 (39)
....|..|+..|.....
T Consensus 47 g~~~CpYCg~~y~~~~~ 63 (87)
T 2jz8_A 47 DEKICPYCSTLYRYDPS 63 (87)
T ss_dssp CEECCTTTCCEEECCTT
T ss_pred CeEECCCCCCEeEcCCC
Confidence 34578889888876654
No 335
>1ef4_A Subunit N, DNA-directed RNA polymerase; three helix bundle, zinc binding, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus} SCOP: a.4.11.1
Probab=29.43 E-value=16 Score=11.40 Aligned_cols=15 Identities=20% Similarity=0.259 Sum_probs=9.9
Q ss_pred cceeccccccccccc
Q psy4412 5 YLYACLWCDYHTLNS 19 (39)
Q Consensus 5 ~~~~c~~c~~~~~~~ 19 (39)
.|..|-.||+...+.
T Consensus 2 iPVRCFTCGkvi~~~ 16 (55)
T 1ef4_A 2 IPVRCLSCGKPVSAY 16 (55)
T ss_dssp CSSSCSCTTSCCHHH
T ss_pred CCeecCCCCCChhHH
Confidence 366788888765443
No 336
>1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1
Probab=29.41 E-value=24 Score=11.79 Aligned_cols=11 Identities=27% Similarity=0.588 Sum_probs=5.9
Q ss_pred eeccccccccc
Q psy4412 7 YACLWCDYHTL 17 (39)
Q Consensus 7 ~~c~~c~~~~~ 17 (39)
..|..|+..|.
T Consensus 26 HHCR~CG~vfC 36 (88)
T 1wfk_A 26 YGCKNCGRAFC 36 (88)
T ss_dssp EECSSSCCEEE
T ss_pred ccCCCCCCEEC
Confidence 45566665543
No 337
>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}
Probab=29.23 E-value=24 Score=11.59 Aligned_cols=11 Identities=27% Similarity=0.525 Sum_probs=5.3
Q ss_pred eeccccccccc
Q psy4412 7 YACLWCDYHTL 17 (39)
Q Consensus 7 ~~c~~c~~~~~ 17 (39)
+.|..|+..|.
T Consensus 38 HHCR~CG~v~C 48 (84)
T 1z2q_A 38 HHCRNCGYVLC 48 (84)
T ss_dssp EECTTTCCEEC
T ss_pred ccccCCCcEEC
Confidence 34555555443
No 338
>4ayb_N DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2wb1_N 2y0s_N 2waq_N 4b1o_N 4b1p_O 2pmz_N 3hkz_N
Probab=28.46 E-value=22 Score=11.55 Aligned_cols=15 Identities=13% Similarity=0.313 Sum_probs=10.3
Q ss_pred cceeccccccccccc
Q psy4412 5 YLYACLWCDYHTLNS 19 (39)
Q Consensus 5 ~~~~c~~c~~~~~~~ 19 (39)
.|..|-.||+.....
T Consensus 3 IPVRCFTCGkvi~~k 17 (66)
T 4ayb_N 3 IPIRCFTCGSLIADK 17 (66)
T ss_dssp CCSBCTTTCCBCHHH
T ss_pred CCcccCCCcHhHHHH
Confidence 467788888866444
No 339
>2co8_A NEDD9 interacting protein with calponin homology and LIM domains; zinc finger protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=28.38 E-value=23 Score=11.27 Aligned_cols=12 Identities=17% Similarity=0.540 Sum_probs=7.3
Q ss_pred eecccccccccc
Q psy4412 7 YACLWCDYHTLN 18 (39)
Q Consensus 7 ~~c~~c~~~~~~ 18 (39)
|.|..|...+..
T Consensus 43 F~C~~C~~~L~~ 54 (82)
T 2co8_A 43 FRCHTCEATLWP 54 (82)
T ss_dssp CBCSSSCCBCCT
T ss_pred CEEcCCCCCcCC
Confidence 567777665543
No 340
>1gh9_A 8.3 kDa protein (gene MTH1184); beta+alpha complex structure, structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: g.41.6.1
Probab=28.34 E-value=25 Score=11.49 Aligned_cols=11 Identities=18% Similarity=0.522 Sum_probs=6.4
Q ss_pred cceecccccccc
Q psy4412 5 YLYACLWCDYHT 16 (39)
Q Consensus 5 ~~~~c~~c~~~~ 16 (39)
+...|. ||+.+
T Consensus 20 kT~~C~-CG~~~ 30 (71)
T 1gh9_A 20 KTRKCV-CGRTV 30 (71)
T ss_dssp SEEEET-TTEEE
T ss_pred cEEECC-CCCee
Confidence 445676 77644
No 341
>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A
Probab=28.09 E-value=20 Score=10.29 Aligned_cols=12 Identities=25% Similarity=0.335 Sum_probs=7.3
Q ss_pred cceecccccccc
Q psy4412 5 YLYACLWCDYHT 16 (39)
Q Consensus 5 ~~~~c~~c~~~~ 16 (39)
.|-.|..|++.+
T Consensus 13 ~pt~C~~C~~~l 24 (52)
T 1faq_A 13 KLAFCDICQKFL 24 (52)
T ss_dssp SCEECTTSSSEE
T ss_pred CCcCCCCccccc
Confidence 455677776643
No 342
>3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens}
Probab=27.07 E-value=28 Score=11.66 Aligned_cols=10 Identities=20% Similarity=0.268 Sum_probs=4.6
Q ss_pred eecccccccc
Q psy4412 7 YACLWCDYHT 16 (39)
Q Consensus 7 ~~c~~c~~~~ 16 (39)
+.|..||..|
T Consensus 37 hhCr~CG~v~ 46 (90)
T 3t7l_A 37 HHCRACGKVF 46 (90)
T ss_dssp EECTTTCCEE
T ss_pred ccccCCCCEE
Confidence 3444555444
No 343
>3o9x_A Uncharacterized HTH-type transcriptional regulato; HTH-XRE DNA binding motif, transcriptional regulator, bacter antitoxin, Zn binding protein, transcription regulator-DNA; HET: DNA; 2.10A {Escherichia coli} PDB: 3gn5_A* 3gn5_B* 2kz8_A
Probab=27.01 E-value=30 Score=12.04 Aligned_cols=15 Identities=20% Similarity=0.607 Sum_probs=10.4
Q ss_pred eeccccccccccchh
Q psy4412 7 YACLWCDYHTLNSGH 21 (39)
Q Consensus 7 ~~c~~c~~~~~~~~~ 21 (39)
+.|..|+..+.....
T Consensus 37 ~~C~~CGE~~~d~e~ 51 (133)
T 3o9x_A 37 LYCVHCEESIMNKEE 51 (133)
T ss_dssp EEESSSSCEECCHHH
T ss_pred eECCCCCCEeecHHH
Confidence 568888887766543
No 344
>3f6q_B LIM and senescent cell antigen-like-containing domain protein 1; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 2kbx_B 3ixe_B
Probab=26.86 E-value=23 Score=10.60 Aligned_cols=11 Identities=18% Similarity=0.449 Sum_probs=6.2
Q ss_pred eeccccccccc
Q psy4412 7 YACLWCDYHTL 17 (39)
Q Consensus 7 ~~c~~c~~~~~ 17 (39)
+.|..|+..+.
T Consensus 40 F~C~~C~~~L~ 50 (72)
T 3f6q_B 40 FVCAQCFQQFP 50 (72)
T ss_dssp SSCTTTCCCCG
T ss_pred CcccCCCCCCC
Confidence 45666665543
No 345
>2uzg_A Ubiquitin carboxyl-terminal hydrolase 33; UBL conjugation pathway, DE-ubiquitination, alternative splicing, metal-binding, thiol protease; NMR {Homo sapiens} SCOP: g.44.1.5
Probab=26.38 E-value=30 Score=11.83 Aligned_cols=14 Identities=43% Similarity=0.847 Sum_probs=9.1
Q ss_pred Ccceeccc--cccccc
Q psy4412 4 TYLYACLW--CDYHTL 17 (39)
Q Consensus 4 ~~~~~c~~--c~~~~~ 17 (39)
+..+.|.. |+....
T Consensus 36 ~~lw~CL~~~Cg~vgC 51 (97)
T 2uzg_A 36 PNLWACLENRCSYVGC 51 (97)
T ss_dssp SSCEEECCTTCCCEEC
T ss_pred CCceeeecccCCCccc
Confidence 44577888 776554
No 346
>2jr7_A DPH3 homolog; DESR1, CSL zinc finger, metal binding protein; NMR {Homo sapiens}
Probab=25.13 E-value=28 Score=11.96 Aligned_cols=14 Identities=21% Similarity=0.539 Sum_probs=8.9
Q ss_pred ceeccccccccccch
Q psy4412 6 LYACLWCDYHTLNSG 20 (39)
Q Consensus 6 ~~~c~~c~~~~~~~~ 20 (39)
.|.|. ||-.|....
T Consensus 23 ~ypCr-CGd~F~Ite 36 (89)
T 2jr7_A 23 FYPCP-CGDNFSITK 36 (89)
T ss_dssp EEECT-TSSEEEEEH
T ss_pred EEcCC-CCCEEEECH
Confidence 35676 887775543
No 347
>2l9z_A PR domain zinc finger protein 4; zinc-binding domain, transcription; NMR {Homo sapiens}
Probab=23.95 E-value=25 Score=10.15 Aligned_cols=12 Identities=25% Similarity=0.432 Sum_probs=7.9
Q ss_pred eecccccccccc
Q psy4412 7 YACLWCDYHTLN 18 (39)
Q Consensus 7 ~~c~~c~~~~~~ 18 (39)
..|..|...|..
T Consensus 12 l~CE~C~~~~~~ 23 (39)
T 2l9z_A 12 IWCTLCDRAYPS 23 (39)
T ss_dssp EEEGGGTEEESS
T ss_pred hHHHHHhhhchh
Confidence 457888776643
No 348
>1x4l_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=23.35 E-value=29 Score=10.55 Aligned_cols=11 Identities=18% Similarity=0.697 Sum_probs=7.2
Q ss_pred eeccccccccc
Q psy4412 7 YACLWCDYHTL 17 (39)
Q Consensus 7 ~~c~~c~~~~~ 17 (39)
|.|..|...+.
T Consensus 36 F~C~~C~~~L~ 46 (72)
T 1x4l_A 36 FNCKKCSLSLV 46 (72)
T ss_dssp CBCSSSCCBCT
T ss_pred CEeccCCCcCC
Confidence 56777776554
No 349
>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=23.19 E-value=29 Score=10.63 Aligned_cols=11 Identities=18% Similarity=0.223 Sum_probs=6.1
Q ss_pred cceeccccccc
Q psy4412 5 YLYACLWCDYH 15 (39)
Q Consensus 5 ~~~~c~~c~~~ 15 (39)
.|-.|..|+..
T Consensus 22 ~pt~C~~C~~~ 32 (65)
T 2enz_A 22 SPTFCEHCGTL 32 (65)
T ss_dssp SCCBCSSSCCB
T ss_pred CCcCchhcChh
Confidence 34456666653
No 350
>3po3_S Transcription elongation factor S-II; RNA polymerase II, mRNA, transcription, arrest, BACKTRACKING cleavage, transferase-DNA-RNA complex; HET: DNA BRU EPE PGE; 3.30A {Saccharomyces cerevisiae} PDB: 1y1v_S 1y1y_S 3gtm_S* 1enw_A
Probab=23.10 E-value=32 Score=13.26 Aligned_cols=9 Identities=22% Similarity=0.593 Sum_probs=4.4
Q ss_pred eeccccccc
Q psy4412 7 YACLWCDYH 15 (39)
Q Consensus 7 ~~c~~c~~~ 15 (39)
|.|..|+..
T Consensus 166 ~~C~~C~~~ 174 (178)
T 3po3_S 166 CTCEACGNR 174 (178)
T ss_dssp EEETTTCCE
T ss_pred EEcCCCCCe
Confidence 445555543
No 351
>2ct7_A Ring finger protein 31; IBR, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.4
Probab=23.08 E-value=33 Score=11.25 Aligned_cols=11 Identities=18% Similarity=0.337 Sum_probs=6.5
Q ss_pred eeccccccccc
Q psy4412 7 YACLWCDYHTL 17 (39)
Q Consensus 7 ~~c~~c~~~~~ 17 (39)
..|..|+..|.
T Consensus 44 v~C~~C~~~FC 54 (86)
T 2ct7_A 44 ATCPQCHQTFC 54 (86)
T ss_dssp EECTTTCCEEC
T ss_pred eEeCCCCCccc
Confidence 45666666554
No 352
>3h0g_I DNA-directed RNA polymerases I, II, and III subunit rpabc5; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=23.04 E-value=38 Score=11.92 Aligned_cols=9 Identities=33% Similarity=1.342 Sum_probs=4.6
Q ss_pred eeccccccc
Q psy4412 7 YACLWCDYH 15 (39)
Q Consensus 7 ~~c~~c~~~ 15 (39)
|.|..|+..
T Consensus 101 y~C~~C~~~ 109 (113)
T 3h0g_I 101 YVCVHCGFA 109 (113)
T ss_dssp EEESSSCCC
T ss_pred EEcCCCCCE
Confidence 455555544
No 353
>3alr_A Nanos protein; zinc-finger, translational repression, RNA, 3'-UTR, metal BI protein; 2.10A {Danio rerio}
Probab=23.01 E-value=28 Score=12.43 Aligned_cols=9 Identities=33% Similarity=0.877 Sum_probs=6.4
Q ss_pred ceecccccc
Q psy4412 6 LYACLWCDY 14 (39)
Q Consensus 6 ~~~c~~c~~ 14 (39)
.|.|..|+.
T Consensus 71 ~Y~CpiCGA 79 (106)
T 3alr_A 71 QYKCPLCGA 79 (106)
T ss_dssp GCCCTTTCC
T ss_pred cccCCCCCC
Confidence 477888874
No 354
>3j21_j 50S ribosomal protein L44E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=22.95 E-value=32 Score=11.99 Aligned_cols=10 Identities=20% Similarity=0.627 Sum_probs=7.4
Q ss_pred eecccccccc
Q psy4412 7 YACLWCDYHT 16 (39)
Q Consensus 7 ~~c~~c~~~~ 16 (39)
+.|..|++..
T Consensus 69 l~C~eC~~~~ 78 (94)
T 3j21_j 69 FRCTECGKAH 78 (94)
T ss_dssp EEESSSCCEE
T ss_pred EEecccCccc
Confidence 6888888654
No 355
>1x61_A Thyroid receptor interacting protein 6; LIM domain, OPA-interacting protein 1, zyxin related protein 1 (ZRP-1), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=22.94 E-value=29 Score=10.50 Aligned_cols=10 Identities=20% Similarity=0.667 Sum_probs=6.7
Q ss_pred eecccccccc
Q psy4412 7 YACLWCDYHT 16 (39)
Q Consensus 7 ~~c~~c~~~~ 16 (39)
|.|..|...+
T Consensus 34 F~C~~C~~~L 43 (72)
T 1x61_A 34 FVCSTCRAQL 43 (72)
T ss_dssp CBCSSSCCBC
T ss_pred CcccccCCcC
Confidence 5677777665
No 356
>1nyp_A Pinch protein; LIM domain, protein recognition, cell adhesion; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3 PDB: 1u5s_B
Probab=22.62 E-value=29 Score=10.30 Aligned_cols=11 Identities=27% Similarity=0.752 Sum_probs=6.7
Q ss_pred eeccccccccc
Q psy4412 7 YACLWCDYHTL 17 (39)
Q Consensus 7 ~~c~~c~~~~~ 17 (39)
+.|..|...+.
T Consensus 32 F~C~~C~~~L~ 42 (66)
T 1nyp_A 32 FVCAKCEKPFL 42 (66)
T ss_dssp CBCTTTCCBCS
T ss_pred CEECCCCCCCC
Confidence 56667766554
No 357
>1wig_A KIAA1808 protein; LIM domain, zinc finger, metal-binding protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=22.62 E-value=29 Score=10.72 Aligned_cols=11 Identities=18% Similarity=0.410 Sum_probs=7.4
Q ss_pred eeccccccccc
Q psy4412 7 YACLWCDYHTL 17 (39)
Q Consensus 7 ~~c~~c~~~~~ 17 (39)
|.|..|...+.
T Consensus 32 F~C~~C~~~L~ 42 (73)
T 1wig_A 32 ALCVRCGQMFA 42 (73)
T ss_dssp SCCSSSCCCCC
T ss_pred CEeCCCCCCCC
Confidence 56777776654
No 358
>1mzb_A Ferric uptake regulation protein; ferric uptake regulator, iron, DTXR, gene regulation; 1.80A {Pseudomonas aeruginosa} SCOP: a.4.5.42
Probab=22.06 E-value=32 Score=12.21 Aligned_cols=12 Identities=8% Similarity=-0.097 Sum_probs=8.9
Q ss_pred eecccccccccc
Q psy4412 7 YACLWCDYHTLN 18 (39)
Q Consensus 7 ~~c~~c~~~~~~ 18 (39)
+.|..|++..--
T Consensus 92 liC~~Cg~v~~~ 103 (136)
T 1mzb_A 92 MVCVDTGEVIEF 103 (136)
T ss_dssp EEETTTCCEEEE
T ss_pred EEECCCCCEEEe
Confidence 578899986644
No 359
>1d4u_A Nucleotide excision repair protein XPA (XPA-MBD); DNA repair, loop-rich domain, relaxation, DNA binding protein; NMR {Homo sapiens} SCOP: a.6.1.2 g.39.1.5 PDB: 1xpa_A
Probab=22.00 E-value=42 Score=12.05 Aligned_cols=11 Identities=18% Similarity=0.495 Sum_probs=7.4
Q ss_pred ecccccccccc
Q psy4412 8 ACLWCDYHTLN 18 (39)
Q Consensus 8 ~c~~c~~~~~~ 18 (39)
.|..|++.|..
T Consensus 7 ~C~eC~~~~~d 17 (111)
T 1d4u_A 7 ICEECGKEFMD 17 (111)
T ss_dssp ECTTTCCEESC
T ss_pred ccccCCChhhH
Confidence 57888876643
No 360
>4fyy_B Aspartate carbamoyltransferase regulatory chain; pyrimidine nucleotide biosynthesis, feedback inhibition, all transferase; HET: UTP CTP; 1.94A {Escherichia coli} PDB: 1ezz_B 1f1b_B* 1i5o_B* 1q95_G* 1r0b_G* 1r0c_B* 1raa_B* 1rab_B* 1rac_B* 1rad_B* 1rae_B* 1raf_B* 1rag_B* 1rah_B* 1rai_B* 1sku_B 1tth_B* 1tu0_B 1tug_B* 1xjw_B* ...
Probab=21.80 E-value=33 Score=13.10 Aligned_cols=14 Identities=14% Similarity=0.529 Sum_probs=10.4
Q ss_pred ceeccccccccccc
Q psy4412 6 LYACLWCDYHTLNS 19 (39)
Q Consensus 6 ~~~c~~c~~~~~~~ 19 (39)
.+.|..|++.|...
T Consensus 135 ~~rC~YCe~~~~~~ 148 (153)
T 4fyy_B 135 ALKCKYCEKEFSHN 148 (153)
T ss_dssp EEEETTTCCEEEHH
T ss_pred EEEeeCCCCEeccc
Confidence 47899999877543
No 361
>3eyy_A Putative iron uptake regulatory protein; NUR, nickel-uptake regulator, D-domain, dimerization domain, DB-domain, DNA-binding domain; 2.40A {Streptomyces coelicolor}
Probab=21.61 E-value=34 Score=12.38 Aligned_cols=12 Identities=17% Similarity=0.241 Sum_probs=8.7
Q ss_pred eecccccccccc
Q psy4412 7 YACLWCDYHTLN 18 (39)
Q Consensus 7 ~~c~~c~~~~~~ 18 (39)
+.|..|++.+--
T Consensus 91 liC~~Cg~v~~~ 102 (145)
T 3eyy_A 91 LVCRDCTNVIEA 102 (145)
T ss_dssp EEESSSSCEEEE
T ss_pred EEECCCCCEEEe
Confidence 578999986543
No 362
>4i1l_A Scurfin, forkhead box protein P3; FOXP3, dimerization, complex ensemble, stability, regulatory activity, acetyation, DNA-binding, metal-binding; 2.10A {Mus musculus}
Probab=21.59 E-value=41 Score=11.75 Aligned_cols=19 Identities=11% Similarity=0.090 Sum_probs=12.0
Q ss_pred ccccccccccchhHHHHhH
Q psy4412 9 CLWCDYHTLNSGHMRDHIR 27 (39)
Q Consensus 9 c~~c~~~~~~~~~~~~~~~ 27 (39)
..-|+..|.....+..|..
T Consensus 17 WPGCe~~~ed~~~FlkHL~ 35 (93)
T 4i1l_A 17 WPGCEKVFEEPEEFLKHCQ 35 (93)
T ss_dssp -CCSTTTTHHHHHHHHHHH
T ss_pred CCCCCCcccCHHHHHHHhh
Confidence 3447777766677777754
No 363
>1zfo_A LAsp-1; LIM domain, zinc-finger, metal-binding protein; NMR {Sus scrofa} SCOP: g.39.1.4
Probab=21.59 E-value=24 Score=9.08 Aligned_cols=10 Identities=20% Similarity=0.524 Sum_probs=6.4
Q ss_pred eccccccccc
Q psy4412 8 ACLWCDYHTL 17 (39)
Q Consensus 8 ~c~~c~~~~~ 17 (39)
.|..|++...
T Consensus 5 ~C~~C~k~Vy 14 (31)
T 1zfo_A 5 NCARCGKIVY 14 (31)
T ss_dssp BCSSSCSBCC
T ss_pred cCCccCCEEe
Confidence 5677777553
No 364
>2iyb_E Testin, TESS, TES; LIM domain, SH3-binding, tumour supressor LIM domain EVH1 DO cell motility, phosphorylation, cytoskeleton; 2.35A {Homo sapiens}
Probab=21.32 E-value=31 Score=10.29 Aligned_cols=12 Identities=17% Similarity=0.581 Sum_probs=7.5
Q ss_pred ceeccccccccc
Q psy4412 6 LYACLWCDYHTL 17 (39)
Q Consensus 6 ~~~c~~c~~~~~ 17 (39)
-|.|..|...+.
T Consensus 32 CF~C~~C~~~L~ 43 (65)
T 2iyb_E 32 CFLCSCCSKCLI 43 (65)
T ss_dssp TSBCTTTCCBCT
T ss_pred CEECCCCCCcCC
Confidence 356777776553
No 365
>1wyh_A SLIM 2, skeletal muscle LIM-protein 2; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=21.06 E-value=33 Score=10.35 Aligned_cols=11 Identities=18% Similarity=0.455 Sum_probs=6.6
Q ss_pred eeccccccccc
Q psy4412 7 YACLWCDYHTL 17 (39)
Q Consensus 7 ~~c~~c~~~~~ 17 (39)
|.|..|...+.
T Consensus 34 F~C~~C~~~L~ 44 (72)
T 1wyh_A 34 FLCSGCEQPLG 44 (72)
T ss_dssp CBCTTTCCBTT
T ss_pred CeECCCCCcCC
Confidence 55666766554
No 366
>4b6d_A RAC GTPase-activating protein 1; signaling protein, cytokinesis, plasma membrane, phospholipi centralspindlin, spindle midzone, central spindle; 2.20A {Homo sapiens}
Probab=20.92 E-value=34 Score=10.58 Aligned_cols=9 Identities=22% Similarity=0.475 Sum_probs=5.1
Q ss_pred cceeccccc
Q psy4412 5 YLYACLWCD 13 (39)
Q Consensus 5 ~~~~c~~c~ 13 (39)
..|.|..|.
T Consensus 34 q~~kC~dC~ 42 (61)
T 4b6d_A 34 LSLKCRDCR 42 (61)
T ss_dssp EEEEESSSS
T ss_pred EeeECCCCC
Confidence 345666664
No 367
>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=20.68 E-value=37 Score=10.90 Aligned_cols=12 Identities=17% Similarity=0.215 Sum_probs=6.5
Q ss_pred cceecccccccc
Q psy4412 5 YLYACLWCDYHT 16 (39)
Q Consensus 5 ~~~~c~~c~~~~ 16 (39)
.|-.|..|...+
T Consensus 33 ~pt~C~~C~~~l 44 (77)
T 2enn_A 33 QPTFCSVCHEFV 44 (77)
T ss_dssp SCEECSSSCCEE
T ss_pred CCcCccccChhh
Confidence 345566666533
No 368
>3q87_A Putative uncharacterized protein ECU08_1170; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=20.66 E-value=27 Score=12.84 Aligned_cols=14 Identities=14% Similarity=0.152 Sum_probs=9.8
Q ss_pred ceeccccccccccc
Q psy4412 6 LYACLWCDYHTLNS 19 (39)
Q Consensus 6 ~~~c~~c~~~~~~~ 19 (39)
...|..|+..|.-.
T Consensus 99 ~L~Cp~cgr~ypI~ 112 (125)
T 3q87_A 99 SLRCDMCGLIYPIK 112 (125)
T ss_dssp EEEETTTCCEEEEE
T ss_pred EEECCCCCCEeecc
Confidence 35788888877544
No 369
>1wvk_A AT2G23090/F21P24.15; structural genomics, protein structure initiative, cell free, center for eukaryotic structural genomics, CESG; NMR {Arabidopsis thaliana} SCOP: g.82.1.1
Probab=20.62 E-value=42 Score=11.50 Aligned_cols=23 Identities=17% Similarity=0.283 Sum_probs=15.1
Q ss_pred ceeccccccccccc---hhHHHHhHH
Q psy4412 6 LYACLWCDYHTLNS---GHMRDHIRR 28 (39)
Q Consensus 6 ~~~c~~c~~~~~~~---~~~~~~~~~ 28 (39)
.+.|.+|..+|... ..|..|...
T Consensus 45 ~i~C~VCr~tFm~t~~~~~L~~H~e~ 70 (86)
T 1wvk_A 45 SIQCKVCMQTFICTTSEVKCREHAEA 70 (86)
T ss_dssp CEEETTTTEEECCSSCSHHHHHHHHT
T ss_pred CCCChHhHhhHHhcCChHHHHHHHHc
Confidence 47899999866444 456666543
No 370
>2xoc_A E3 ubiquitin-protein ligase CHFR; zinc-binding, poly(ADP-ribose) mitosis, antephase checkpoint, cell cycle; HET: PGE ADP ADE; 1.89A {Homo sapiens} PDB: 2xoy_A* 2xoz_A* 2xp0_A
Probab=20.47 E-value=54 Score=13.81 Aligned_cols=14 Identities=14% Similarity=0.085 Sum_probs=10.2
Q ss_pred cceecccccccccc
Q psy4412 5 YLYACLWCDYHTLN 18 (39)
Q Consensus 5 ~~~~c~~c~~~~~~ 18 (39)
.|..|..|...|..
T Consensus 103 ~pq~C~iC~r~FC~ 116 (261)
T 2xoc_A 103 APQQCAVCLQPFCH 116 (261)
T ss_dssp CCCBCTTTCCBCCH
T ss_pred CCCCCCCcCccccC
Confidence 46778888887764
No 371
>1y8f_A UNC-13 homolog A, MUNC13-1; cysteine-rich domain, C1-domain, zinc-binding domain, endocytosis/exocytosis,signaling protein complex; NMR {Rattus norvegicus}
Probab=20.42 E-value=27 Score=10.77 Aligned_cols=10 Identities=20% Similarity=0.305 Sum_probs=5.2
Q ss_pred ceeccccccc
Q psy4412 6 LYACLWCDYH 15 (39)
Q Consensus 6 ~~~c~~c~~~ 15 (39)
|-.|+.|+..
T Consensus 24 pt~C~~C~~~ 33 (66)
T 1y8f_A 24 PTYCYECEGL 33 (66)
T ss_dssp CCCCTTTCCC
T ss_pred CcChhhcChh
Confidence 4456666543
No 372
>2cur_A Skeletal muscle LIM-protein 1; four and A half LIM domains protein 1, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=20.42 E-value=34 Score=10.26 Aligned_cols=11 Identities=18% Similarity=0.697 Sum_probs=6.8
Q ss_pred eeccccccccc
Q psy4412 7 YACLWCDYHTL 17 (39)
Q Consensus 7 ~~c~~c~~~~~ 17 (39)
|.|..|...+.
T Consensus 32 F~C~~C~~~L~ 42 (69)
T 2cur_A 32 FVCVTCSKKLA 42 (69)
T ss_dssp TBCTTTCCBCT
T ss_pred CEECCCCCCCC
Confidence 56677766553
No 373
>2d8z_A Four and A half LIM domains 2; skeletal muscle LIM-protein 3, LIM-domain protein DRAL, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=20.41 E-value=34 Score=10.27 Aligned_cols=11 Identities=18% Similarity=0.567 Sum_probs=6.9
Q ss_pred eeccccccccc
Q psy4412 7 YACLWCDYHTL 17 (39)
Q Consensus 7 ~~c~~c~~~~~ 17 (39)
|.|..|...+.
T Consensus 32 F~C~~C~~~L~ 42 (70)
T 2d8z_A 32 FVCTACRKQLS 42 (70)
T ss_dssp SBCSSSCCBCT
T ss_pred CccCCCCCcCC
Confidence 56777776553
No 374
>1rfh_A RAS association (ralgds/AF-6) domain family 5; zinc, signal transduction, apoptosis, cysteine rich domain, metal binding protein; NMR {Mus musculus}
Probab=20.40 E-value=34 Score=10.35 Aligned_cols=12 Identities=17% Similarity=0.088 Sum_probs=7.0
Q ss_pred cceecccccccc
Q psy4412 5 YLYACLWCDYHT 16 (39)
Q Consensus 5 ~~~~c~~c~~~~ 16 (39)
.|-.|+.|+...
T Consensus 21 ~pt~C~~C~~~i 32 (59)
T 1rfh_A 21 GPGWCDLCGREV 32 (59)
T ss_dssp CCEECTTTCSEE
T ss_pred CCeEchhcchhh
Confidence 355677776543
No 375
>2db6_A SH3 and cysteine rich domain 3; STAC3, C1 domain, cystein-rich domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.40 E-value=33 Score=10.94 Aligned_cols=12 Identities=17% Similarity=0.102 Sum_probs=6.8
Q ss_pred cceecccccccc
Q psy4412 5 YLYACLWCDYHT 16 (39)
Q Consensus 5 ~~~~c~~c~~~~ 16 (39)
.|-.|..|+..+
T Consensus 27 ~pt~C~~C~~~l 38 (74)
T 2db6_A 27 KPKFCDVCARMI 38 (74)
T ss_dssp SCEECSSSCCEE
T ss_pred CCcCchhcChhh
Confidence 345566776543
No 376
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=20.19 E-value=48 Score=13.41 Aligned_cols=18 Identities=17% Similarity=0.464 Sum_probs=11.8
Q ss_pred cceeccccccccccchhH
Q psy4412 5 YLYACLWCDYHTLNSGHM 22 (39)
Q Consensus 5 ~~~~c~~c~~~~~~~~~~ 22 (39)
.-..|+.|+..+.....+
T Consensus 221 ~Iv~Cp~CgRIL~~~~~~ 238 (256)
T 3na7_A 221 DMITCPYCGRILYAEGAY 238 (256)
T ss_dssp SCEECTTTCCEEECSCC-
T ss_pred CEEECCCCCeeEEeCcch
Confidence 346799999877655443
No 377
>1wii_A Hypothetical UPF0222 protein MGC4549; domain of unknown function, zinc finger, metal-binding protein, structural genomics; NMR {Mus musculus} SCOP: g.41.3.4
Probab=20.12 E-value=33 Score=11.65 Aligned_cols=8 Identities=25% Similarity=1.248 Sum_probs=4.9
Q ss_pred eecccccc
Q psy4412 7 YACLWCDY 14 (39)
Q Consensus 7 ~~c~~c~~ 14 (39)
|.|..|+.
T Consensus 24 F~CPfCnh 31 (85)
T 1wii_A 24 FTCPFCNH 31 (85)
T ss_dssp CCCTTTCC
T ss_pred EcCCCCCC
Confidence 56666654
No 378
>2d8x_A Protein pinch; LIM domain, pinch protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=20.08 E-value=35 Score=10.27 Aligned_cols=12 Identities=17% Similarity=0.520 Sum_probs=7.1
Q ss_pred eecccccccccc
Q psy4412 7 YACLWCDYHTLN 18 (39)
Q Consensus 7 ~~c~~c~~~~~~ 18 (39)
|.|..|...+..
T Consensus 32 F~C~~C~~~L~~ 43 (70)
T 2d8x_A 32 FRCDLCQEVLAD 43 (70)
T ss_dssp SBCSSSCCBCSS
T ss_pred CEeCCCCCcCCC
Confidence 566677665543
Done!