Query psy4417
Match_columns 440
No_of_seqs 314 out of 3876
Neff 7.7
Searched_HMMs 29240
Date Fri Aug 16 16:35:17 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4417.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4417hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2xkx_A Disks large homolog 4; 100.0 1.3E-59 4.6E-64 513.0 31.7 345 6-430 307-718 (721)
2 3tvt_A Disks large 1 tumor sup 100.0 9.9E-58 3.4E-62 445.8 18.1 257 94-430 2-287 (292)
3 3shw_A Tight junction protein 100.0 2E-54 7E-59 445.4 17.2 325 6-435 1-388 (468)
4 3tsz_A Tight junction protein 100.0 4.4E-52 1.5E-56 422.4 19.4 322 4-429 7-390 (391)
5 1kjw_A Postsynaptic density pr 100.0 6.8E-52 2.3E-56 406.2 16.1 254 97-430 1-292 (295)
6 1ex7_A Guanylate kinase; subst 100.0 1.1E-35 3.8E-40 272.1 14.1 181 165-420 3-185 (186)
7 3kfv_A Tight junction protein 100.0 1.1E-35 3.6E-40 290.3 9.8 244 95-432 2-302 (308)
8 4dey_A Voltage-dependent L-typ 100.0 1.1E-33 3.7E-38 277.1 11.3 247 96-420 37-321 (337)
9 3ney_A 55 kDa erythrocyte memb 100.0 5.6E-33 1.9E-37 256.0 13.6 179 163-427 19-197 (197)
10 1kgd_A CASK, peripheral plasma 99.9 4.3E-23 1.5E-27 187.4 13.4 172 165-420 7-179 (180)
11 3tau_A Guanylate kinase, GMP k 99.9 8.3E-23 2.8E-27 189.9 11.4 183 164-422 9-191 (208)
12 2xkx_A Disks large homolog 4; 99.9 9.8E-21 3.3E-25 206.5 27.4 97 260-372 530-627 (721)
13 3a00_A Guanylate kinase, GMP k 99.9 1.6E-22 5.4E-27 184.5 10.5 179 166-419 4-184 (186)
14 1s96_A Guanylate kinase, GMP k 99.8 4.2E-21 1.4E-25 180.1 13.2 184 161-420 14-198 (219)
15 2qor_A Guanylate kinase; phosp 99.8 3.2E-20 1.1E-24 171.6 11.6 183 163-421 12-198 (204)
16 1ex7_A Guanylate kinase; subst 99.8 2.5E-20 8.5E-25 170.2 10.7 110 263-386 4-135 (186)
17 1lvg_A Guanylate kinase, GMP k 99.8 9.3E-19 3.2E-23 161.3 11.4 180 165-420 6-188 (198)
18 3tvt_A Disks large 1 tumor sup 99.7 1.7E-18 5.8E-23 168.7 8.1 109 260-384 99-229 (292)
19 1kjw_A Postsynaptic density pr 99.7 1.4E-17 4.8E-22 162.8 10.3 97 260-372 104-201 (295)
20 3lnc_A Guanylate kinase, GMP k 99.6 3.2E-15 1.1E-19 140.4 10.4 182 165-422 29-211 (231)
21 3tr0_A Guanylate kinase, GMP k 99.5 2.1E-14 7.1E-19 131.6 11.3 179 165-420 9-187 (205)
22 3gge_A PDZ domain-containing p 99.5 3.9E-14 1.3E-18 114.0 9.8 82 4-85 3-88 (95)
23 3ney_A 55 kDa erythrocyte memb 99.5 8.4E-14 2.9E-18 127.9 8.7 100 260-374 18-119 (197)
24 1r6j_A Syntenin 1; PDZ, membra 99.5 2.7E-13 9.1E-18 106.7 9.5 77 5-87 3-82 (82)
25 1z6g_A Guanylate kinase; struc 99.4 2.1E-12 7E-17 120.5 15.3 184 165-422 25-210 (218)
26 3o46_A Maguk P55 subfamily mem 99.4 3.3E-12 1.1E-16 102.7 11.1 83 6-88 4-89 (93)
27 2ejy_A 55 kDa erythrocyte memb 99.3 6.3E-12 2.1E-16 102.2 11.0 82 6-87 12-96 (97)
28 2j41_A Guanylate kinase; GMP, 99.3 2.6E-12 9.1E-17 117.5 9.8 180 165-422 8-189 (207)
29 1kwa_A Hcask/LIN-2 protein; PD 99.3 1E-11 3.5E-16 99.0 10.4 81 7-87 2-85 (88)
30 2he4_A Na(+)/H(+) exchange reg 99.3 2.4E-11 8.2E-16 97.0 11.3 82 4-86 2-86 (90)
31 3i4w_A Disks large homolog 4; 99.3 2.4E-11 8.3E-16 99.6 11.1 85 2-86 7-94 (104)
32 2d92_A INAD-like protein; PDZ 99.3 2.7E-11 9.4E-16 100.2 11.3 84 4-87 13-105 (108)
33 2dkr_A LIN-7 homolog B; LIN-7B 99.3 3E-11 1E-15 96.9 10.9 85 3-87 2-90 (93)
34 2jik_A Synaptojanin-2 binding 99.3 2.2E-11 7.5E-16 99.4 9.7 85 2-86 3-96 (101)
35 1g9o_A NHE-RF; PDZ domain, com 99.3 5E-11 1.7E-15 95.3 11.6 80 5-85 2-84 (91)
36 3r68_A Na(+)/H(+) exchange reg 99.2 2E-11 6.9E-16 98.4 9.2 83 3-86 2-87 (95)
37 3b76_A E3 ubiquitin-protein li 99.2 2E-11 6.8E-16 102.9 9.4 82 5-86 23-112 (118)
38 1d5g_A Human phosphatase HPTP1 99.2 4.5E-11 1.5E-15 96.5 11.0 83 4-86 3-92 (96)
39 2fne_A Multiple PDZ domain pro 99.2 2.1E-11 7.2E-16 102.6 9.2 84 3-86 22-112 (117)
40 2awx_A Synapse associated prot 99.2 4.4E-11 1.5E-15 98.4 10.8 84 5-88 2-94 (105)
41 2e7k_A Maguk P55 subfamily mem 99.2 3.2E-11 1.1E-15 96.7 9.5 85 3-88 3-89 (91)
42 3l4f_D SH3 and multiple ankyri 99.2 8.3E-11 2.8E-15 101.1 12.6 84 4-88 25-125 (132)
43 1wha_A KIAA0147 protein, scrib 99.2 4.5E-11 1.6E-15 98.3 10.3 85 4-88 5-99 (105)
44 2vsp_A PDZ domain-containing p 99.2 8.3E-12 2.8E-16 100.0 5.6 82 4-86 1-85 (91)
45 1n7e_A AMPA receptor interacti 99.2 8.4E-11 2.9E-15 95.2 11.6 84 5-88 4-91 (97)
46 2lj0_A Sorbin and SH3 domain-c 99.2 7.3E-12 2.5E-16 94.0 4.2 58 96-161 5-62 (65)
47 2lx7_A GAS-7, growth arrest-sp 99.2 6.2E-12 2.1E-16 92.8 3.7 54 98-160 4-58 (60)
48 2ego_A General receptor for ph 99.2 8.3E-11 2.9E-15 95.1 10.4 81 5-86 3-95 (96)
49 1v62_A KIAA1719 protein; struc 99.2 1E-10 3.4E-15 98.3 11.3 86 4-89 13-104 (117)
50 2iwo_A Multiple PDZ domain pro 99.2 5.6E-11 1.9E-15 100.4 9.8 85 3-87 21-113 (120)
51 2v90_A PDZ domain-containing p 99.2 9.3E-11 3.2E-15 94.7 10.5 82 5-87 2-89 (96)
52 2ege_A Uncharacterized protein 99.2 9.3E-12 3.2E-16 96.3 4.3 63 96-161 6-69 (75)
53 1wi4_A Synip, syntaxin binding 99.2 1.3E-10 4.4E-15 96.4 11.6 82 4-86 13-104 (109)
54 1uhp_A Hypothetical protein KI 99.2 1E-10 3.5E-15 96.5 10.8 83 4-86 6-100 (107)
55 2dlu_A INAD-like protein; PDZ 99.2 7.6E-11 2.6E-15 97.9 10.0 83 5-87 14-98 (111)
56 1ujd_A KIAA0559 protein; PDZ d 99.2 1.1E-10 3.7E-15 98.1 11.1 85 4-88 10-110 (117)
57 2opg_A Multiple PDZ domain pro 99.2 1.2E-10 4.1E-15 94.3 10.8 82 5-86 3-89 (98)
58 2fe5_A Presynaptic protein SAP 99.2 1.5E-10 5.1E-15 93.0 11.2 80 6-85 3-91 (94)
59 2i1n_A Discs, large homolog 3; 99.2 1.3E-10 4.5E-15 94.9 11.0 82 6-87 4-94 (102)
60 2byg_A Channel associated prot 99.2 6.2E-11 2.1E-15 99.7 9.3 81 5-85 23-112 (117)
61 2d90_A PDZ domain containing p 99.2 1.4E-10 4.8E-15 94.8 11.1 83 3-86 3-88 (102)
62 3cbz_A Dishevelled-2; PDZ doma 99.2 7.6E-11 2.6E-15 97.6 9.6 84 4-87 3-96 (108)
63 2dc2_A GOPC, golgi associated 99.2 6.7E-11 2.3E-15 97.1 9.0 84 4-88 7-96 (103)
64 2yt7_A Amyloid beta A4 precurs 99.2 2.7E-10 9.2E-15 93.0 12.6 84 4-87 7-99 (101)
65 2db5_A INAD-like protein; PDZ 99.2 5.9E-11 2E-15 101.3 8.8 85 4-88 23-116 (128)
66 1nf3_C PAR-6B; semi-CRIB motif 99.2 1E-10 3.5E-15 99.8 10.3 84 4-87 27-125 (128)
67 2r4h_A Membrane-associated gua 99.2 1.5E-10 5E-15 96.5 10.9 82 4-85 22-107 (112)
68 2q9v_A Membrane-associated gua 99.2 7.8E-11 2.7E-15 93.9 8.8 80 6-85 2-87 (90)
69 3qe1_A Sorting nexin-27, G pro 99.2 2E-10 6.9E-15 94.6 11.6 84 3-87 3-102 (107)
70 4e34_A Golgi-associated PDZ an 99.2 1.2E-10 4.1E-15 92.3 9.5 79 5-84 1-85 (87)
71 2f5y_A Regulator of G-protein 99.2 1.2E-10 4.1E-15 93.2 9.6 80 5-87 2-83 (91)
72 1qav_A Alpha-1 syntrophin (res 99.2 1.3E-10 4.4E-15 92.7 9.7 81 5-85 3-88 (90)
73 1wf8_A Neurabin-I; PDZ domain, 99.2 1.1E-10 3.7E-15 96.4 9.5 83 5-87 8-100 (107)
74 2ehr_A INAD-like protein; PDZ 99.2 2.1E-10 7.3E-15 96.1 11.5 84 5-88 14-111 (117)
75 2jil_A GRIP1 protein, glutamat 99.2 1.2E-10 4.2E-15 94.1 9.6 81 7-87 4-92 (97)
76 1uju_A Scribble; PDZ domain, c 99.2 8.4E-11 2.9E-15 97.7 8.7 86 3-88 6-105 (111)
77 1i16_A Interleukin 16, LCF; cy 99.2 7.1E-11 2.4E-15 101.2 8.3 82 5-86 28-117 (130)
78 2qg1_A Multiple PDZ domain pro 99.2 2.2E-10 7.5E-15 91.7 10.6 81 6-86 4-88 (92)
79 2daz_A INAD-like protein; PDZ 99.2 1.8E-10 6.2E-15 97.7 10.7 85 3-87 22-111 (124)
80 1wi2_A Riken cDNA 2700099C19; 99.2 2.5E-10 8.6E-15 93.7 11.2 82 4-87 13-99 (104)
81 1um1_A KIAA1849 protein, RSGI 99.1 3.3E-10 1.1E-14 93.9 11.7 84 3-86 5-95 (110)
82 3axa_A Afadin, nectin-3, prote 99.1 2.1E-10 7.2E-15 94.4 10.4 83 4-87 9-98 (106)
83 2csi_A RIM-BP2, RIM binding pr 99.1 2.9E-11 9.8E-16 93.7 4.8 63 96-161 6-69 (76)
84 1ufx_A KIAA1526 protein; PDZ d 99.1 2E-10 6.7E-15 94.3 10.0 82 5-86 5-96 (103)
85 2kpk_A Membrane-associated gua 99.1 3.9E-10 1.3E-14 96.3 12.2 84 4-87 16-105 (129)
86 1ueq_A Membrane associated gua 99.1 3.6E-10 1.2E-14 95.8 11.9 84 4-87 17-106 (123)
87 1uep_A Membrane associated gua 99.1 7.9E-11 2.7E-15 96.5 7.4 83 6-88 9-97 (103)
88 2vwr_A Ligand of NUMB protein 99.1 2.8E-10 9.5E-15 91.7 10.5 81 6-86 3-88 (95)
89 2eei_A PDZ domain-containing p 99.1 1.2E-10 4.1E-15 95.9 8.1 84 3-87 5-91 (106)
90 1m5z_A GRIP, AMPA receptor int 99.1 3.7E-10 1.3E-14 90.1 10.7 81 4-85 4-89 (91)
91 2i04_A Membrane-associated gua 99.1 3.9E-10 1.3E-14 88.8 10.6 77 8-84 2-84 (85)
92 2eno_A Synaptojanin-2-binding 99.1 1.7E-10 5.7E-15 97.3 9.1 83 5-87 16-107 (120)
93 2dls_A PDZ-rhogef, RHO guanine 99.1 4.8E-10 1.7E-14 90.0 11.4 81 3-87 5-87 (93)
94 1q7x_A PDZ2B domain of PTP-BAS 99.1 1.9E-10 6.4E-15 95.1 8.9 84 4-87 7-102 (108)
95 2ed1_A 130 kDa phosphatidylino 99.1 4.4E-11 1.5E-15 92.6 4.8 59 96-161 9-67 (76)
96 1tp5_A Presynaptic density pro 99.1 3.8E-10 1.3E-14 94.9 10.8 85 2-86 10-97 (119)
97 2uzc_A Human pdlim5, PDZ and L 99.1 3.6E-10 1.2E-14 89.6 9.9 78 6-85 3-84 (88)
98 3e17_A Tight junction protein 99.1 3E-10 1E-14 90.4 9.3 77 9-89 3-83 (88)
99 2la8_A Inactivation-NO-after-p 99.1 6.5E-10 2.2E-14 91.7 11.6 78 8-86 4-84 (106)
100 3egg_C Spinophilin; PP1, serin 99.1 2.8E-10 9.5E-15 102.0 10.0 80 6-85 80-169 (170)
101 2o2t_A Multiple PDZ domain pro 99.1 1.1E-10 3.8E-15 97.9 6.9 84 4-87 18-110 (117)
102 2kv8_A RGS12, regulator of G-p 99.1 8.3E-11 2.8E-15 92.4 5.7 79 5-86 1-81 (83)
103 1b07_A Protein (proto-oncogene 99.1 5.7E-11 2E-15 89.2 4.3 55 97-160 3-57 (65)
104 2gzv_A PRKCA-binding protein; 99.1 8.2E-10 2.8E-14 92.3 11.8 83 4-86 22-109 (114)
105 1uew_A Membrane associated gua 99.1 1.1E-09 3.6E-14 91.4 12.4 84 4-88 8-104 (114)
106 1ihj_A INAD; intermolecular di 99.1 4.3E-10 1.5E-14 91.1 9.7 79 7-85 6-95 (98)
107 3tau_A Guanylate kinase, GMP k 99.1 2E-10 7E-15 106.0 8.7 101 259-373 6-107 (208)
108 1va8_A Maguk P55 subfamily mem 99.1 6.8E-10 2.3E-14 92.6 10.8 81 6-87 25-108 (113)
109 2vsv_A Rhophilin-2; scaffold p 99.1 4.9E-10 1.7E-14 92.9 9.7 79 6-87 23-104 (109)
110 2fcf_A Multiple PDZ domain pro 99.1 1.1E-09 3.9E-14 89.4 11.6 83 5-87 3-99 (103)
111 3hpk_A Protein interacting wit 99.1 7.5E-10 2.6E-14 94.0 10.6 83 4-86 17-104 (125)
112 1tg0_A BBC1 protein, myosin ta 99.1 8.4E-11 2.9E-15 89.0 4.1 58 96-160 6-65 (68)
113 1zlm_A Osteoclast stimulating 99.1 6.9E-11 2.4E-15 86.5 3.5 55 97-161 3-57 (58)
114 2djt_A Unnamed protein product 99.1 9.2E-10 3.1E-14 90.2 10.5 83 5-87 10-98 (104)
115 2jxo_A Ezrin-radixin-moesin-bi 99.1 9.4E-10 3.2E-14 89.1 10.5 79 5-84 8-90 (98)
116 2g5m_B Neurabin-2; spinophilin 99.1 4.2E-10 1.4E-14 93.7 8.6 81 7-87 5-95 (113)
117 2gnc_A SLIT-ROBO RHO GTPase-ac 99.1 5.2E-11 1.8E-15 87.8 2.6 56 95-160 4-59 (60)
118 1q3o_A Shank1; PDZ, GKAP, pept 99.1 8.7E-10 3E-14 91.2 10.4 81 6-87 7-104 (109)
119 4amh_A Disks large homolog 1; 99.0 7E-10 2.4E-14 91.4 9.6 76 11-86 7-91 (106)
120 2dm8_A INAD-like protein; PDZ 99.0 3.1E-10 1.1E-14 94.9 7.4 84 4-87 15-103 (116)
121 1k4u_S Phagocyte NADPH oxidase 99.0 1.4E-10 4.8E-15 86.1 4.4 55 96-160 4-58 (62)
122 2dmz_A INAD-like protein; PDZ 99.0 1.8E-09 6.2E-14 92.0 12.0 83 5-87 14-106 (129)
123 3ulr_B SRC substrate cortactin 99.0 1.7E-10 6E-15 86.3 4.9 56 95-160 7-62 (65)
124 3nfk_A Tyrosine-protein phosph 99.0 9.6E-10 3.3E-14 90.5 9.8 81 5-85 16-106 (107)
125 1uti_A GRB2-related adaptor pr 99.0 1.2E-10 4.2E-15 85.1 3.9 53 98-160 2-54 (58)
126 1w70_A Neutrophil cytosol fact 99.0 1.2E-10 4.1E-15 85.8 3.8 54 97-160 4-57 (60)
127 1v6b_A Harmonin isoform A1; st 99.0 1E-09 3.4E-14 92.3 9.9 80 7-87 19-107 (118)
128 3bpu_A Membrane-associated gua 99.0 7.2E-10 2.5E-14 87.9 8.6 79 4-85 1-84 (88)
129 1jo8_A ABP1P, actin binding pr 99.0 1.7E-10 5.7E-15 84.4 4.4 54 99-160 2-55 (58)
130 3ngh_A PDZ domain-containing p 99.0 7.6E-10 2.6E-14 91.0 9.0 79 7-86 2-84 (106)
131 1n7t_A 99-MER peptide of densi 99.0 1.1E-09 3.6E-14 89.7 9.7 80 4-86 9-100 (103)
132 2cs5_A Tyrosine-protein phosph 99.0 1.4E-09 4.9E-14 91.3 10.8 82 5-87 14-106 (119)
133 2drm_A Acanthamoeba myosin IB; 99.0 1.5E-10 5E-15 84.7 4.1 54 97-160 3-56 (58)
134 1um7_A Synapse-associated prot 99.0 3.5E-10 1.2E-14 94.0 7.0 85 2-86 11-98 (113)
135 2fei_A CD2-associated protein; 99.0 8.2E-11 2.8E-15 88.3 2.8 54 98-161 2-55 (65)
136 2bz8_A SH3-domain kinase bindi 99.0 1.5E-10 5.1E-15 84.7 4.1 54 98-161 2-55 (58)
137 1uj0_A Signal transducing adap 99.0 1.2E-10 4E-15 86.5 3.5 56 96-161 4-59 (62)
138 2ew3_A SH3-containing GRB2-lik 99.0 1.3E-10 4.6E-15 88.0 3.9 56 97-162 3-58 (68)
139 1cka_A C-CRK N-terminal SH3 do 99.0 1.3E-10 4.6E-15 84.6 3.8 53 99-160 3-55 (57)
140 2eyx_A V-CRK sarcoma virus CT1 99.0 1.4E-10 4.9E-15 87.5 4.0 56 96-161 5-62 (67)
141 2ak5_A RHO guanine nucleotide 99.0 1.4E-10 4.9E-15 86.5 3.9 56 96-161 5-60 (64)
142 1sem_A SEM-5; SRC-homology 3 ( 99.0 1.6E-10 5.4E-15 84.5 3.9 53 98-160 3-55 (58)
143 2pa1_A PDZ and LIM domain prot 99.0 1.5E-09 5E-14 85.9 9.9 72 14-86 9-84 (87)
144 2z17_A Pleckstrin homology SEC 99.0 1.1E-09 3.7E-14 89.8 9.4 79 4-83 13-103 (104)
145 1wg6_A Hypothetical protein (r 99.0 4.1E-10 1.4E-14 96.0 7.1 78 10-87 29-122 (127)
146 2qkv_A Inactivation-NO-after-p 99.0 1.4E-09 4.9E-14 87.8 10.0 79 6-85 8-89 (96)
147 1wfg_A Regulating synaptic mem 99.0 1.2E-09 4.1E-14 93.6 10.0 71 16-86 47-126 (131)
148 2nwm_A Vinexin; cell adhesion; 99.0 1.7E-10 5.9E-15 86.5 4.1 53 99-161 3-55 (65)
149 1rgw_A ZAsp protein; PDZ, cyph 99.0 7.8E-10 2.7E-14 87.0 8.1 76 8-85 3-82 (85)
150 1x5q_A LAP4 protein; PDZ domai 99.0 2.1E-09 7.1E-14 89.0 11.1 83 4-87 13-105 (110)
151 2b86_A Cytoplasmic protein NCK 99.0 1.4E-10 4.7E-15 87.7 3.5 55 97-161 4-58 (67)
152 2w4f_A Protein LAP4; structura 99.0 2.1E-09 7.2E-14 86.7 10.8 80 6-86 3-92 (97)
153 2iim_A Proto-oncogene tyrosine 99.0 2.6E-10 8.7E-15 84.6 4.9 56 96-160 5-60 (62)
154 2jre_A C60-1 PDZ domain peptid 99.0 1.3E-09 4.6E-14 89.8 9.7 82 5-86 11-103 (108)
155 2l0a_A STAM-1, signal transduc 99.0 1.5E-10 5.1E-15 88.7 3.6 57 94-160 14-70 (72)
156 1uit_A Human discs large 5 pro 99.0 1.8E-09 6.2E-14 90.4 10.6 82 5-87 18-101 (117)
157 1zx6_A YPR154WP; SH3 domain, p 99.0 1.4E-10 4.8E-15 84.8 3.3 53 98-160 3-55 (58)
158 2ke9_A Caskin-2; SH3 domain, A 99.0 2.3E-10 7.7E-15 90.2 4.6 60 95-161 16-79 (83)
159 2q3g_A PDZ and LIM domain prot 99.0 1.2E-09 4E-14 86.9 8.9 78 7-86 4-85 (89)
160 2rqv_A BUD emergence protein 1 99.0 6.9E-11 2.4E-15 97.8 1.7 60 96-162 4-63 (108)
161 2g6f_X RHO guanine nucleotide 99.0 1.6E-10 5.6E-15 84.8 3.5 53 98-160 5-57 (59)
162 2eeg_A PDZ and LIM domain prot 99.0 1.2E-09 4E-14 87.9 8.9 81 4-86 6-90 (94)
163 1mfg_A ERB-B2 interacting prot 99.0 2.2E-09 7.5E-14 86.4 10.5 75 9-86 6-92 (95)
164 2vwf_A Growth factor receptor- 99.0 2E-10 6.8E-15 83.9 3.9 53 98-160 3-55 (58)
165 2koj_A Partitioning defective 99.0 2.7E-09 9.1E-14 88.4 11.2 82 6-87 11-101 (111)
166 2fpe_A C-JUN-amino-terminal ki 99.0 2.5E-10 8.7E-15 84.6 4.4 56 98-161 4-59 (62)
167 2iwq_A Multiple PDZ domain pro 99.0 2.9E-09 9.8E-14 90.2 11.5 83 5-87 23-119 (123)
168 3khf_A Microtubule-associated 99.0 1.4E-09 4.8E-14 88.2 9.2 78 9-87 5-93 (99)
169 2i0n_A Class VII unconventiona 99.0 2E-10 6.7E-15 89.9 3.9 58 94-161 7-65 (80)
170 3h0h_A Proto-oncogene tyrosine 99.0 2.9E-10 9.8E-15 87.2 4.8 58 96-161 14-71 (73)
171 2bzy_A CRK-like protein, CRKL 99.0 1.5E-10 5.1E-15 87.3 3.1 54 98-161 2-57 (67)
172 2yuy_A RHO GTPase activating p 99.0 2.2E-10 7.6E-15 97.5 4.5 85 3-88 5-121 (126)
173 2xmf_A Myosin 1E SH3; motor pr 99.0 2.4E-10 8.1E-15 84.2 4.1 54 97-160 5-58 (60)
174 2jte_A CD2-associated protein; 99.0 2.5E-10 8.6E-15 85.2 4.2 55 96-160 5-61 (64)
175 3a00_A Guanylate kinase, GMP k 99.0 6.5E-10 2.2E-14 100.6 7.8 96 263-372 4-99 (186)
176 2yt6_A Adult MALE urinary blad 99.0 3.9E-10 1.3E-14 93.4 5.8 76 77-161 8-83 (109)
177 1y7n_A Amyloid beta A4 precurs 99.0 2.4E-09 8.2E-14 85.6 10.2 76 5-86 10-89 (90)
178 2qor_A Guanylate kinase; phosp 99.0 2.3E-09 7.8E-14 98.4 11.5 102 258-374 9-112 (204)
179 2yuq_A Tyrosine-protein kinase 99.0 2.8E-10 9.5E-15 90.1 4.6 58 96-162 18-75 (85)
180 2cud_A SRC-like-adapter; SH3 d 99.0 3E-10 1E-14 88.6 4.7 57 96-161 16-72 (79)
181 2dl4_A Protein STAC; SH3 domai 99.0 2.8E-10 9.4E-15 86.1 4.3 56 96-161 6-61 (68)
182 2dmo_A Neutrophil cytosol fact 99.0 2.2E-10 7.5E-15 86.7 3.7 56 96-161 6-61 (68)
183 2pkt_A PDZ and LIM domain prot 99.0 2.1E-09 7.1E-14 85.8 9.6 79 7-87 4-86 (91)
184 1wie_A RIM binding protein 2; 99.0 3.3E-10 1.1E-14 91.8 4.8 64 95-161 15-79 (96)
185 1z87_A Alpha-1-syntrophin; pro 99.0 1.4E-09 4.8E-14 103.9 10.0 82 5-87 76-163 (263)
186 1csk_A C-SRC SH3 domain; phosp 99.0 2E-10 7E-15 87.6 3.4 58 96-162 10-68 (71)
187 1wyx_A CRK-associated substrat 99.0 2.5E-10 8.5E-15 86.6 3.8 55 97-161 3-60 (69)
188 2k2m_A EPS8-like protein 1; al 99.0 4E-10 1.4E-14 85.2 4.9 57 95-161 6-62 (68)
189 3kzd_A TIAM-1, T-lymphoma inva 99.0 2.2E-09 7.4E-14 86.4 9.4 77 5-84 5-89 (94)
190 2ydl_A SH3 domain-containing k 99.0 2.7E-10 9.2E-15 86.5 3.9 54 98-161 3-58 (69)
191 1wf7_A Enigma homologue protei 99.0 2.4E-09 8.2E-14 87.6 9.8 83 3-87 2-88 (103)
192 2csj_A TJP2 protein; PDZ domai 99.0 1.7E-09 5.8E-14 90.6 9.0 79 6-86 14-103 (117)
193 2d8j_A FYN-related kinase; SH3 99.0 3.2E-10 1.1E-14 87.9 4.2 58 97-161 7-70 (77)
194 1x6d_A Interleukin-16; PDZ dom 99.0 1.6E-09 5.6E-14 91.0 8.9 83 4-86 13-102 (119)
195 1oot_A Hypothetical 40.4 kDa p 99.0 3.3E-10 1.1E-14 83.4 4.0 54 97-160 3-58 (60)
196 1x2q_A Signal transducing adap 99.0 4.1E-10 1.4E-14 89.7 4.8 57 95-161 15-71 (88)
197 2j6f_A CD2-associated protein; 99.0 2.9E-10 1E-14 84.3 3.7 54 98-161 2-56 (62)
198 2dbk_A CRK-like protein; struc 99.0 4.7E-10 1.6E-14 89.4 5.1 57 95-161 14-72 (88)
199 1x2k_A OSTF1, osteoclast stimu 99.0 3.4E-10 1.2E-14 85.6 4.1 56 96-161 6-61 (68)
200 1wfv_A Membrane associated gua 99.0 9.6E-10 3.3E-14 89.8 7.1 82 6-87 11-96 (103)
201 2kym_A BUD emergence protein 1 99.0 4E-10 1.4E-14 95.1 4.8 58 97-161 3-60 (120)
202 1kgd_A CASK, peripheral plasma 99.0 1.4E-09 4.7E-14 98.0 8.6 100 261-374 5-105 (180)
203 4e6r_A Cytoplasmic protein NCK 99.0 2.8E-10 9.5E-15 83.1 3.3 54 98-161 2-55 (58)
204 2kgt_A Tyrosine-protein kinase 99.0 3.2E-10 1.1E-14 86.7 3.7 58 96-161 9-69 (72)
205 1awj_A ITK; transferase, regul 99.0 1.6E-10 5.4E-15 89.7 2.0 57 96-161 19-75 (77)
206 2iwn_A Multiple PDZ domain pro 99.0 2.6E-09 9E-14 85.9 9.4 79 7-85 5-91 (97)
207 1x2p_A Protein arginine N-meth 99.0 3.9E-10 1.3E-14 85.2 4.1 56 96-161 6-61 (68)
208 2j05_A RAS GTPase-activating p 99.0 5.3E-10 1.8E-14 83.7 4.7 55 98-160 6-61 (65)
209 3k1r_A Harmonin; protein-prote 99.0 1.9E-09 6.5E-14 98.4 9.4 83 3-87 81-168 (192)
210 3tsv_A Tight junction protein 98.9 3.5E-09 1.2E-13 89.8 10.3 76 10-86 32-111 (124)
211 2ebp_A SAM and SH3 domain-cont 98.9 5.2E-10 1.8E-14 85.9 4.7 55 97-161 9-65 (73)
212 2dl8_A SLIT-ROBO RHO GTPase-ac 98.9 2.6E-10 9E-15 87.3 2.9 57 95-161 7-63 (72)
213 1ue9_A Intersectin 2; beta bar 98.9 6.4E-10 2.2E-14 86.9 5.2 59 96-161 6-66 (80)
214 2djq_A SH3 domain containing r 98.9 3.9E-10 1.3E-14 85.2 3.8 56 96-161 6-61 (68)
215 3c0c_A Endophilin-A2; endocyto 98.9 4.1E-10 1.4E-14 86.4 4.0 56 96-161 12-67 (73)
216 1aww_A ATK, AMGX1, BPK, bruton 98.9 2.7E-10 9.2E-15 85.9 2.8 57 96-161 7-63 (67)
217 2egc_A SH3 and PX domain-conta 98.9 4.4E-10 1.5E-14 86.8 4.1 59 96-162 9-68 (75)
218 1v5q_A GRIP1 homolog, glutamat 98.9 3.4E-09 1.2E-13 89.5 10.0 85 4-88 13-108 (122)
219 1gl5_A Tyrosine-protein kinase 98.9 3.4E-10 1.2E-14 85.3 3.3 56 98-162 3-58 (67)
220 1uez_A KIAA1526 protein; PDZ d 98.9 3.5E-09 1.2E-13 86.2 9.7 83 3-87 5-93 (101)
221 1y0m_A 1-phosphatidylinositol- 98.9 4.4E-10 1.5E-14 83.1 3.8 54 97-160 3-57 (61)
222 2d8h_A SH3YL1 protein; SH3 dom 98.9 6.3E-10 2.2E-14 86.9 4.9 58 94-161 14-73 (80)
223 2k9g_A SH3 domain-containing k 98.9 6.4E-10 2.2E-14 85.2 4.9 56 96-161 8-65 (73)
224 3soe_A Membrane-associated gua 98.9 3.7E-09 1.3E-13 88.0 9.8 81 4-88 10-94 (113)
225 1uhc_A KIAA1010 protein; beta 98.9 6.1E-10 2.1E-14 86.8 4.7 56 96-161 12-71 (79)
226 2h2b_A Tight junction protein 98.9 4.4E-09 1.5E-13 86.5 10.1 80 5-86 6-96 (107)
227 2ysq_A RHO guanine nucleotide 98.9 7E-10 2.4E-14 86.9 4.9 57 95-161 8-64 (81)
228 2dlp_A KIAA1783 protein; SH3 d 98.9 5E-10 1.7E-14 88.6 4.1 57 95-161 6-64 (85)
229 2dl3_A Sorbin and SH3 domain-c 98.9 6E-10 2.1E-14 84.1 4.3 56 96-161 6-61 (68)
230 2dbm_A SH3-containing GRB2-lik 98.9 3.7E-10 1.3E-14 86.6 3.1 56 96-161 6-61 (73)
231 4glm_A Dynamin-binding protein 98.9 4.9E-10 1.7E-14 85.5 3.8 56 96-161 12-67 (72)
232 2o9s_A Ponsin; SH3 domain, sig 98.9 5.3E-10 1.8E-14 84.2 3.9 57 97-161 6-62 (67)
233 1vb7_A PDZ and LIM domain 2; P 98.9 2.6E-09 9E-14 85.8 8.2 76 11-87 10-89 (94)
234 2ed0_A ABL interactor 2; coile 98.9 6.9E-10 2.4E-14 86.3 4.6 56 96-161 16-71 (78)
235 1ugv_A KIAA0621, olygophrenin- 98.9 4.3E-10 1.5E-14 86.1 3.3 56 96-161 9-65 (72)
236 3u23_A CD2-associated protein; 98.9 3E-10 1E-14 84.9 2.4 56 96-161 6-61 (65)
237 1i07_A Epidermal growth factor 98.9 4.2E-10 1.4E-14 82.8 3.2 54 98-161 2-55 (60)
238 3ngp_A Spectrin alpha chain, b 98.9 5.1E-10 1.8E-14 82.8 3.6 54 97-160 6-59 (62)
239 2cre_A HEF-like protein; SH3 d 98.9 5.9E-10 2E-14 84.9 4.1 56 96-161 6-64 (71)
240 3gsl_A Disks large homolog 4; 98.9 3.4E-09 1.2E-13 96.2 9.9 81 6-86 5-94 (196)
241 2a28_A BZZ1 protein; SH3 domai 98.9 6.8E-10 2.3E-14 79.9 4.1 50 100-159 3-53 (54)
242 2eeh_A PDZ domain-containing p 98.9 5.7E-09 1.9E-13 84.8 10.2 81 5-87 9-94 (100)
243 2kxd_A 11-MER peptide, SH3 dom 98.9 6.3E-10 2.2E-14 85.3 4.2 53 98-161 1-53 (73)
244 1x6g_A Megakaryocyte-associate 98.9 1E-09 3.5E-14 86.0 5.4 58 97-162 17-75 (81)
245 2eqi_A Phospholipase C, gamma 98.9 4.9E-10 1.7E-14 85.0 3.5 57 96-161 6-62 (69)
246 2dl7_A KIAA0769 protein; SH3 d 98.9 6.5E-10 2.2E-14 85.3 4.2 56 96-161 7-65 (73)
247 2v1q_A SLA1, cytoskeleton asse 98.9 8.1E-10 2.8E-14 81.2 4.6 55 98-160 3-58 (60)
248 2oaw_A Spectrin alpha chain, b 98.9 3.8E-10 1.3E-14 84.3 2.8 56 98-160 2-62 (65)
249 1z9q_A Neutrophil cytosol fact 98.9 2.8E-10 9.6E-15 88.8 2.0 56 96-161 17-72 (79)
250 3rnj_A Brain-specific angiogen 98.9 8.3E-10 2.8E-14 83.1 4.6 57 96-160 6-64 (67)
251 1yn8_A NBP2, NAP1-binding prot 98.9 4.7E-10 1.6E-14 82.2 3.1 55 98-160 2-56 (59)
252 1zuu_A BZZ1 protein; SH3 domai 98.9 6.3E-10 2.2E-14 81.2 3.8 55 98-160 2-57 (58)
253 4esr_A Jouberin; AHI-1, AHI1, 98.9 4.7E-10 1.6E-14 85.0 3.2 56 98-162 7-62 (69)
254 2yuo_A CIP85, RUN and TBC1 dom 98.9 7E-10 2.4E-14 86.2 4.2 56 96-161 6-61 (78)
255 2gqi_A RAS GTPase-activating p 98.9 2.7E-10 9.3E-15 86.9 1.8 57 97-161 7-64 (71)
256 1s96_A Guanylate kinase, GMP k 98.9 1.1E-08 3.9E-13 95.2 13.3 101 258-372 13-115 (219)
257 3cqt_A P59-FYN, proto-oncogene 98.9 8.4E-10 2.9E-14 86.1 4.6 56 98-161 6-61 (79)
258 2m0y_A Dedicator of cytokinesi 98.9 8.7E-10 3E-14 84.7 4.7 58 96-161 10-67 (74)
259 1ujy_A RHO guanine nucleotide 98.9 6.2E-10 2.1E-14 86.1 3.8 57 95-161 8-64 (76)
260 2kom_A Partitioning defective 98.9 7.1E-09 2.4E-13 87.5 10.6 80 6-85 30-118 (121)
261 1wxt_A Hypothetical protein FL 98.9 8.2E-10 2.8E-14 83.5 4.3 56 96-161 6-61 (68)
262 1x69_A Cortactin isoform A; SH 98.9 9.6E-10 3.3E-14 85.7 4.8 57 95-161 15-71 (79)
263 1neg_A Spectrin alpha chain, b 98.9 7.1E-10 2.4E-14 87.3 3.9 57 96-162 16-72 (83)
264 3eg3_A Proto-oncogene tyrosine 98.9 7.7E-10 2.6E-14 82.1 3.9 55 97-161 5-60 (63)
265 1zuy_A Myosin-5 isoform; SH3 d 98.9 8.5E-10 2.9E-14 80.5 4.0 54 99-160 2-56 (58)
266 2kjd_A Sodium/hydrogen exchang 98.9 8.9E-09 3E-13 87.5 11.0 81 4-85 7-91 (128)
267 2lcs_A NAP1-binding protein 2; 98.9 5.7E-10 2E-14 85.7 3.2 57 98-162 6-62 (73)
268 2edz_A PDZ domain-containing p 98.9 7.6E-09 2.6E-13 86.2 10.3 82 4-86 11-96 (114)
269 2csq_A RIM-BP2, RIM binding pr 98.9 6.2E-10 2.1E-14 90.4 3.4 63 96-161 16-80 (97)
270 1vae_A Rhophilin 2, rhophilin, 98.9 1.2E-09 4.3E-14 90.8 5.4 80 5-87 14-96 (111)
271 2jw4_A Cytoplasmic protein NCK 98.9 1E-09 3.6E-14 83.9 4.5 55 97-161 7-61 (72)
272 2fpf_A C-JUN-amino-terminal ki 98.9 7.9E-10 2.7E-14 84.3 3.8 57 97-161 6-62 (71)
273 1gbq_A GRB2; complex (signal t 98.9 5.9E-10 2E-14 85.8 3.1 56 96-161 8-64 (74)
274 2dil_A Proline-serine-threonin 98.9 1E-09 3.5E-14 83.1 4.4 55 97-161 8-62 (69)
275 2jt4_A Cytoskeleton assembly c 98.9 1.3E-09 4.6E-14 82.9 5.0 57 97-161 6-63 (71)
276 2da9_A SH3-domain kinase bindi 98.9 9.6E-10 3.3E-14 83.5 4.1 56 96-161 6-63 (70)
277 2jxb_A T-cell surface glycopro 98.9 1.1E-09 3.9E-14 86.7 4.7 55 97-161 31-85 (86)
278 1uhf_A Intersectin 2; beta bar 98.9 8.4E-10 2.9E-14 83.7 3.7 55 96-161 7-61 (69)
279 1wif_A RSGI RUH-020, riken cDN 98.9 4E-09 1.4E-13 89.7 8.4 81 5-86 26-110 (126)
280 2dm1_A Protein VAV-2; RHO fami 98.9 6.3E-10 2.1E-14 85.4 3.0 56 96-161 6-63 (73)
281 2edv_A FERM and PDZ domain-con 98.9 1.8E-09 6.2E-14 87.2 5.9 80 4-87 6-89 (96)
282 2rf0_A Mitogen-activated prote 98.9 1.1E-09 3.7E-14 87.5 4.4 56 96-160 28-88 (89)
283 3thk_A Spectrin alpha chain, b 98.9 8.6E-10 2.9E-14 84.4 3.6 55 97-161 5-59 (73)
284 1x43_A Endophilin B1, SH3 doma 98.9 1.2E-09 4.2E-14 85.5 4.6 56 96-161 16-73 (81)
285 2ecz_A Sorbin and SH3 domain-c 98.9 5.8E-10 2E-14 84.7 2.6 58 96-161 6-63 (70)
286 4f14_A Nebulette; SH3 domain, 98.9 8.9E-10 3E-14 82.0 3.6 56 97-160 6-61 (64)
287 1u5s_A Cytoplasmic protein NCK 98.9 9E-10 3.1E-14 83.9 3.6 56 97-161 6-63 (71)
288 1wi7_A SH3-domain kinase bindi 98.9 3.8E-10 1.3E-14 85.3 1.5 56 96-161 6-61 (68)
289 1wxb_A Epidermal growth factor 98.9 1.5E-09 5E-14 82.1 4.7 56 96-161 6-61 (68)
290 2epd_A RHO GTPase-activating p 98.9 5.5E-10 1.9E-14 86.4 2.2 56 96-161 9-64 (76)
291 2cuc_A SH3 domain containing r 98.9 8.6E-10 3E-14 83.7 3.3 58 96-161 6-63 (70)
292 1nm7_A Peroxisomal membrane pr 98.9 1.1E-09 3.6E-14 83.2 3.7 56 97-160 7-67 (69)
293 2kxc_A Brain-specific angiogen 98.9 1.2E-09 4.2E-14 82.2 4.1 57 96-160 5-63 (67)
294 3r0h_A INAD, inactivation-NO-a 98.9 1E-08 3.5E-13 94.2 11.1 83 4-86 16-107 (206)
295 1spk_A RSGI RUH-010, riken cDN 98.9 1.4E-09 4.9E-14 83.0 4.5 58 96-161 6-65 (72)
296 4ag1_C Fynomer; hydrolase-de n 98.9 1.3E-09 4.3E-14 86.1 4.2 57 97-161 6-62 (84)
297 1ruw_A Myosin-3 isoform, MYO3; 98.9 1.2E-09 4.3E-14 82.7 4.0 55 99-161 4-59 (69)
298 2pqh_A Spectrin alpha chain, b 98.9 1.1E-09 3.8E-14 85.5 3.8 54 98-161 3-56 (80)
299 2dl5_A KIAA0769 protein; SH3 d 98.9 1.7E-09 5.7E-14 84.1 4.7 57 96-161 12-69 (78)
300 2yun_A Nostrin; nitric oxide s 98.9 1.4E-09 4.6E-14 84.8 4.2 56 96-161 6-61 (79)
301 2x3w_D Syndapin I, protein kin 98.9 1.1E-09 3.9E-14 80.4 3.5 54 98-160 4-58 (60)
302 1w1f_A Tyrosine-protein kinase 98.9 1.2E-09 4E-14 81.7 3.7 57 96-161 6-62 (65)
303 2ct3_A Vinexin; SH3 domian, st 98.9 1.4E-09 4.9E-14 82.5 4.1 58 96-161 6-63 (70)
304 2ekh_A SH3 and PX domain-conta 98.9 1.3E-09 4.5E-14 85.2 3.9 55 97-161 8-62 (80)
305 1j3t_A Intersectin 2; beta bar 98.9 2.2E-09 7.6E-14 82.5 5.1 55 96-161 9-63 (74)
306 2dnu_A RUH-061, SH3 multiple d 98.8 1.7E-09 5.7E-14 82.4 4.3 55 97-161 8-62 (71)
307 2vz5_A TAX1-binding protein 3; 98.8 6.3E-09 2.2E-13 90.0 8.5 83 4-87 21-124 (139)
308 3qik_A Phosphatidylinositol 3, 98.8 1.5E-08 5.2E-13 82.2 9.8 76 8-85 19-99 (101)
309 2d8i_A T-cell lymphoma invasio 98.8 9.7E-09 3.3E-13 85.8 9.0 82 4-88 13-102 (114)
310 2cub_A Cytoplasmic protein NCK 98.8 1.1E-09 3.6E-14 87.3 2.9 56 96-161 16-71 (88)
311 2lob_A Golgi-associated PDZ an 98.3 3.4E-10 1.1E-14 94.4 0.0 79 5-84 26-110 (112)
312 1wx6_A Cytoplasmic protein NCK 98.8 3E-09 1E-13 85.1 5.6 58 96-162 16-75 (91)
313 2ega_A SH3 and PX domain-conta 98.8 2E-09 6.7E-14 81.8 4.1 55 97-161 8-62 (70)
314 1uff_A Intersectin 2; beta bar 98.8 1.1E-09 3.9E-14 88.0 2.9 56 97-162 5-62 (93)
315 2edp_A Fragment, shroom family 98.8 6.4E-09 2.2E-13 84.6 7.4 82 4-86 7-93 (100)
316 2vkn_A Protein SSU81; membrane 98.8 1.7E-09 5.9E-14 82.1 3.7 58 96-161 4-61 (70)
317 2yup_A Vinexin; sorbin and SH3 98.8 2.2E-09 7.6E-14 85.8 4.6 58 97-162 17-74 (90)
318 2o2o_A SH3-domain kinase-bindi 98.8 9.5E-10 3.2E-14 88.3 2.2 56 96-161 17-72 (92)
319 1x6b_A RHO guanine exchange fa 98.8 2.3E-09 7.8E-14 83.5 4.3 58 95-161 15-72 (79)
320 2enm_A Sorting nexin-9; SH3-li 98.8 2.7E-09 9.3E-14 82.6 4.7 57 96-161 8-66 (77)
321 1whd_A RGS3, regulator of G-pr 98.8 3.3E-09 1.1E-13 86.3 5.4 78 6-86 15-94 (100)
322 1udl_A Intersectin 2, KIAA1256 98.8 1.9E-09 6.5E-14 87.6 3.8 56 96-161 33-88 (98)
323 1hsq_A Phospholipase C-gamma ( 98.8 6.2E-10 2.1E-14 84.9 0.7 55 97-161 6-61 (71)
324 2rqr_A CED-12 homolog, engulfm 98.8 3.3E-09 1.1E-13 89.3 5.0 58 96-161 58-115 (119)
325 1s1n_A Nephrocystin 1; beta ba 98.8 1.7E-09 5.8E-14 81.6 2.7 56 97-161 10-65 (68)
326 2ct4_A CDC42-interacting prote 98.8 3E-09 1E-13 80.7 4.1 55 98-161 8-63 (70)
327 1ujv_A Membrane associated gua 98.8 5.7E-08 1.9E-12 78.4 11.9 80 4-87 8-91 (96)
328 1v5l_A PDZ and LIM domain 3; a 98.8 7.1E-09 2.4E-13 84.7 6.6 82 4-87 3-88 (103)
329 1x5n_A Harmonin; PDZ domain, u 98.8 4.1E-08 1.4E-12 81.6 11.2 80 5-86 14-98 (114)
330 1bb9_A Amphiphysin 2; transfer 98.8 1.6E-09 5.5E-14 90.7 2.3 60 94-160 41-112 (115)
331 1qau_A Neuronal nitric oxide s 98.8 3.9E-08 1.3E-12 81.4 10.7 81 7-87 2-87 (112)
332 1i1j_A Melanoma derived growth 98.8 2.6E-09 8.9E-14 88.3 3.3 59 97-162 22-88 (108)
333 2oi3_A Tyrosine-protein kinase 98.8 7.1E-09 2.4E-13 81.9 5.6 57 96-161 24-80 (86)
334 3qwx_X Cell death abnormality 98.8 7.5E-09 2.6E-13 92.9 6.2 88 58-160 85-172 (174)
335 3reb_B Tyrosine-protein kinase 98.8 4.5E-09 1.5E-13 83.9 4.2 55 98-161 4-58 (90)
336 3cyy_A Tight junction protein 98.8 4.8E-08 1.6E-12 77.8 10.1 77 6-86 2-82 (92)
337 2eaq_A LIM domain only protein 98.7 3.6E-08 1.2E-12 78.3 9.2 75 9-85 6-87 (90)
338 1jqq_A PEX13P, peroxisomal mem 98.7 6.5E-09 2.2E-13 83.3 4.8 60 94-161 11-75 (92)
339 3sfj_A TAX1-binding protein 3; 98.7 3.7E-08 1.3E-12 80.4 9.3 66 18-84 20-102 (104)
340 1wh1_A KIAA1095 protein; PDZ d 98.7 3.3E-08 1.1E-12 83.6 9.0 79 9-87 22-107 (124)
341 2v1r_A Peroxisomal membrane pr 98.7 4.6E-09 1.6E-13 81.9 3.3 59 95-161 12-75 (80)
342 1b8q_A Protein (neuronal nitri 98.7 4.5E-08 1.5E-12 83.1 9.7 85 3-87 5-94 (127)
343 1u3o_A Huntingtin-associated p 98.7 6.7E-09 2.3E-13 80.4 4.1 54 99-159 19-75 (82)
344 1wxu_A Peroxisomal biogenesis 98.7 5.1E-09 1.7E-13 84.2 3.6 58 95-161 15-76 (93)
345 2e5k_A Suppressor of T-cell re 98.7 6.5E-09 2.2E-13 83.7 4.2 58 96-161 15-76 (94)
346 1p1d_A PDZ45, glutamate recept 98.7 5.3E-08 1.8E-12 88.9 10.1 84 3-86 3-97 (196)
347 2krg_A Na(+)/H(+) exchange reg 98.7 1.8E-08 6E-13 93.7 6.8 79 5-84 8-90 (216)
348 4d8k_A Tyrosine-protein kinase 98.7 7.6E-09 2.6E-13 93.0 4.2 58 96-162 11-68 (175)
349 3gsl_A Disks large homolog 4; 98.7 7.3E-08 2.5E-12 87.3 10.1 79 8-86 102-189 (196)
350 1k1z_A VAV; SH3, proto-oncogen 98.7 1.7E-08 5.9E-13 78.2 5.0 60 97-161 15-75 (78)
351 1mv3_A MYC box dependent inter 98.7 7.2E-09 2.5E-13 95.6 3.2 58 96-160 141-210 (213)
352 2qbw_A PDZ-fibronectin fusion 98.7 6.2E-08 2.1E-12 88.1 9.4 67 17-85 2-80 (195)
353 1lvg_A Guanylate kinase, GMP k 98.7 4.3E-08 1.5E-12 89.6 8.2 98 260-372 3-102 (198)
354 1znw_A Guanylate kinase, GMP k 98.7 1.3E-07 4.6E-12 86.7 11.4 118 151-276 8-127 (207)
355 2kbt_A Chimera of proto-oncoge 98.7 1.1E-08 3.7E-13 88.9 3.7 56 97-162 5-61 (142)
356 2rcz_A Tight junction protein 98.6 9.4E-08 3.2E-12 73.9 8.4 67 15-85 11-79 (81)
357 2qt5_A Glutamate receptor-inte 98.6 1E-07 3.6E-12 87.1 9.8 80 6-86 7-92 (200)
358 3i5r_A Phosphatidylinositol 3- 98.6 7.1E-09 2.4E-13 81.5 1.2 58 96-161 4-76 (83)
359 1w9e_A Syntenin 1; cell adhesi 98.6 2.1E-07 7.1E-12 82.6 10.7 80 4-85 2-85 (166)
360 3o5z_A Phosphatidylinositol 3- 98.6 2.1E-08 7.3E-13 80.1 3.1 58 96-161 10-82 (90)
361 1gcq_C VAV proto-oncogene; SH3 98.6 2.6E-08 8.7E-13 75.5 3.3 41 120-161 26-67 (70)
362 2dvj_A V-CRK sarcoma virus CT1 98.6 4E-08 1.4E-12 92.2 5.0 61 95-164 134-194 (230)
363 3r0h_A INAD, inactivation-NO-a 98.6 2E-07 6.8E-12 85.4 9.4 70 16-86 124-195 (206)
364 1gri_A Growth factor bound pro 98.6 4.4E-08 1.5E-12 90.8 5.0 57 95-161 156-212 (217)
365 1uf1_A KIAA1526 protein; PDZ d 98.5 3.5E-07 1.2E-11 77.6 10.0 80 6-87 20-104 (128)
366 2qt5_A Glutamate receptor-inte 98.5 3.1E-07 1.1E-11 83.9 9.7 79 8-86 108-194 (200)
367 1g2b_A Spectrin alpha chain; c 98.5 1.7E-07 5.8E-12 69.2 5.4 42 96-144 20-61 (62)
368 3suz_A Amyloid beta A4 precurs 98.4 9.1E-08 3.1E-12 96.7 4.2 84 4-87 202-294 (388)
369 2yub_A LIMK-2, LIM domain kina 98.4 8.5E-07 2.9E-11 74.3 9.3 80 7-87 13-105 (118)
370 3a98_A DOCK2, dedicator of cyt 98.4 5.3E-08 1.8E-12 88.2 2.0 57 97-161 17-73 (184)
371 1ng2_A Neutrophil cytosolic fa 98.4 1.8E-07 6.2E-12 85.4 5.4 56 96-161 10-65 (193)
372 3jv3_A Intersectin-1; SH3 doma 98.4 1E-07 3.5E-12 91.8 3.9 54 98-161 3-56 (283)
373 3qwy_A Cell death abnormality 98.4 3.4E-07 1.2E-11 89.6 6.7 87 59-160 115-201 (308)
374 2h8h_A Proto-oncogene tyrosine 98.4 1.5E-07 5.1E-12 99.0 4.2 59 96-162 84-142 (535)
375 1ng2_A Neutrophil cytosolic fa 98.4 2.2E-07 7.6E-12 84.8 4.7 55 97-161 81-135 (193)
376 1tuc_A Alpha-spectrin; capping 98.4 1.9E-07 6.6E-12 69.2 3.1 40 119-161 4-43 (63)
377 2eyz_A V-CRK sarcoma virus CT1 98.3 4E-07 1.4E-11 88.9 6.0 58 96-162 133-190 (304)
378 1v1c_A Obscurin; muscle, sarco 98.3 3E-07 1E-11 68.7 3.1 58 100-164 8-70 (71)
379 2pz1_A RHO guanine nucleotide 98.3 3.7E-07 1.3E-11 94.4 4.2 56 96-161 29-84 (466)
380 1fmk_A C-SRC, P60-SRC, tyrosin 98.3 3.3E-07 1.1E-11 94.1 3.6 55 99-161 4-58 (452)
381 1p1d_A PDZ45, glutamate recept 98.3 3.1E-06 1.1E-10 77.0 9.7 79 8-86 109-194 (196)
382 1k9a_A Carboxyl-terminal SRC k 98.3 4.3E-07 1.5E-11 93.2 4.3 57 97-162 11-68 (450)
383 2eyz_A V-CRK sarcoma virus CT1 98.2 6.1E-07 2.1E-11 87.7 4.6 56 96-161 236-293 (304)
384 3tsz_A Tight junction protein 98.2 1.6E-06 5.3E-11 87.7 7.6 96 260-383 231-328 (391)
385 2dyb_A Neutrophil cytosol fact 98.2 4.7E-07 1.6E-11 89.9 3.7 55 97-161 174-228 (341)
386 2jmc_A Spectrin alpha chain, b 98.2 3.9E-07 1.3E-11 70.4 2.3 39 120-161 7-45 (77)
387 3lnc_A Guanylate kinase, GMP k 98.2 3.8E-06 1.3E-10 78.1 9.2 102 258-373 24-126 (231)
388 1gri_A Growth factor bound pro 98.2 4.6E-07 1.6E-11 83.9 2.9 52 99-160 2-54 (217)
389 3shw_A Tight junction protein 98.2 2E-06 7E-11 88.4 7.1 96 260-383 223-320 (468)
390 2lqn_A CRK-like protein; SH2, 97.5 2.6E-07 8.7E-12 90.3 0.0 58 96-162 124-181 (303)
391 2de0_X Alpha-(1,6)-fucosyltran 98.1 1.8E-06 6.1E-11 90.2 5.5 58 97-162 442-499 (526)
392 1opk_A P150, C-ABL, proto-onco 98.1 1.2E-06 4.1E-11 91.1 4.2 55 96-160 42-97 (495)
393 3i18_A LMO2051 protein; alpha- 98.1 9.1E-06 3.1E-10 65.8 8.3 55 29-85 7-63 (100)
394 3tr0_A Guanylate kinase, GMP k 98.1 1.3E-05 4.3E-10 72.6 10.1 99 259-372 5-104 (205)
395 2pzd_A Serine protease HTRA2; 98.1 6.2E-06 2.1E-10 68.1 7.3 56 29-86 35-90 (113)
396 1qcf_A Haematopoetic cell kina 98.1 2E-06 6.9E-11 88.3 5.0 56 97-161 8-63 (454)
397 2kjp_A Uncharacterized protein 98.1 1.6E-06 5.5E-11 69.1 3.3 55 30-86 2-58 (91)
398 2l97_A HTRA, putative serine p 98.1 1E-05 3.6E-10 69.1 8.5 56 29-86 57-114 (134)
399 2lqn_A CRK-like protein; SH2, 97.3 5E-07 1.7E-11 88.3 0.0 57 97-161 237-293 (303)
400 2kl1_A YLBL protein; structure 98.1 5.3E-06 1.8E-10 66.4 6.0 56 29-86 5-62 (94)
401 3id1_A Regulator of sigma E pr 98.0 1E-05 3.5E-10 64.9 6.7 55 32-87 5-61 (95)
402 2i6v_A General secretion pathw 98.0 1.2E-05 4E-10 63.3 6.7 55 30-85 20-76 (87)
403 1ri9_A FYN-binding protein; SH 98.0 3.3E-06 1.1E-10 67.6 3.2 39 120-160 57-95 (102)
404 2p3w_A Probable serine proteas 98.0 1.5E-05 5E-10 65.8 6.9 55 29-85 35-89 (112)
405 3suz_A Amyloid beta A4 precurs 97.9 1.4E-06 4.8E-11 88.0 0.6 64 18-87 309-374 (388)
406 2zpm_A Regulator of sigma E pr 97.9 9.8E-06 3.4E-10 64.1 5.1 54 31-85 6-60 (91)
407 1w9e_A Syntenin 1; cell adhesi 97.9 5.4E-05 1.8E-09 66.8 10.2 64 17-86 100-165 (166)
408 3haj_A Human pacsin2 F-BAR; pa 97.9 1.6E-06 5.4E-11 90.2 0.0 56 97-161 428-484 (486)
409 1z6g_A Guanylate kinase; struc 97.9 2.6E-05 8.8E-10 72.1 8.0 111 249-374 11-123 (218)
410 2gtj_A FYN-binding protein; SH 97.9 8.5E-06 2.9E-10 64.7 3.6 40 120-161 43-84 (96)
411 1gvn_B Zeta; postsegregational 97.8 1.6E-06 5.6E-11 83.8 -0.9 183 164-422 34-231 (287)
412 3eph_A TRNA isopentenyltransfe 97.8 8.7E-07 3E-11 89.3 -3.4 102 165-277 4-108 (409)
413 4a8c_A Periplasmic PH-dependen 97.8 7.2E-05 2.4E-09 76.6 10.2 56 30-86 364-419 (436)
414 3qwy_A Cell death abnormality 97.8 3.5E-06 1.2E-10 82.4 0.0 57 97-161 247-303 (308)
415 3exa_A TRNA delta(2)-isopenten 97.8 8.2E-07 2.8E-11 86.6 -4.5 102 165-277 5-109 (322)
416 2j41_A Guanylate kinase; GMP, 97.8 0.00019 6.5E-09 64.7 11.5 103 260-376 5-108 (207)
417 1te0_A Protease DEGS; two doma 97.7 7.4E-05 2.5E-09 73.1 8.8 57 29-86 244-302 (318)
418 2i4s_A General secretion pathw 97.7 5.6E-05 1.9E-09 61.6 6.5 54 31-85 39-94 (105)
419 2hga_A Conserved protein MTH13 97.7 0.0001 3.5E-09 62.2 7.6 54 28-83 24-79 (125)
420 1y8t_A Hypothetical protein RV 97.7 0.00011 3.6E-09 72.1 8.8 67 18-85 230-299 (324)
421 3stj_A Protease DEGQ; serine p 97.6 9.8E-05 3.4E-09 73.2 8.3 57 29-86 263-321 (345)
422 3pv2_A DEGQ; trypsin fold, PDZ 97.6 9.5E-05 3.2E-09 76.0 8.2 56 30-86 387-442 (451)
423 3rle_A Golgi reassembly-stacki 97.6 8.6E-05 2.9E-09 68.2 6.9 66 18-85 96-168 (209)
424 1fc6_A Photosystem II D1 prote 97.6 0.00013 4.5E-09 73.4 8.7 68 18-86 86-158 (388)
425 3ehr_A Osteoclast-stimulating 97.6 4.9E-05 1.7E-09 69.4 4.8 59 94-162 11-69 (222)
426 4fgm_A Aminopeptidase N family 97.5 9.1E-05 3.1E-09 78.7 6.9 67 17-86 485-553 (597)
427 3rle_A Golgi reassembly-stacki 97.5 9.6E-05 3.3E-09 67.9 4.9 57 29-86 16-75 (209)
428 3k50_A Putative S41 protease; 97.4 0.00011 3.9E-09 74.2 5.8 69 16-86 73-145 (403)
429 1lcy_A HTRA2 serine protease; 97.4 0.00019 6.5E-09 70.5 7.1 56 29-86 256-311 (325)
430 3qo6_A Protease DO-like 1, chl 97.4 0.00018 6.1E-09 71.4 6.3 68 18-86 234-320 (348)
431 3pvl_A Myosin VIIA isoform 1; 97.4 3.7E-05 1.3E-09 82.5 1.1 58 95-160 571-636 (655)
432 3foz_A TRNA delta(2)-isopenten 97.4 5E-06 1.7E-10 81.0 -5.3 101 165-276 12-115 (316)
433 3pe0_A Plectin; cytoskeleton, 97.3 0.00011 3.7E-09 70.9 3.6 55 94-160 195-249 (283)
434 3pv2_A DEGQ; trypsin fold, PDZ 97.2 0.00047 1.6E-08 70.8 7.3 57 29-86 282-340 (451)
435 4a8c_A Periplasmic PH-dependen 97.2 0.00049 1.7E-08 70.3 7.1 57 29-86 263-321 (436)
436 1ky9_A Protease DO, DEGP, HTRA 96.9 0.00017 5.7E-09 74.1 0.6 57 29-86 383-439 (448)
437 1ycs_B 53BP2, P53BP2; ankyrin 96.9 0.00049 1.7E-08 63.7 3.4 53 99-161 172-227 (239)
438 3num_A Serine protease HTRA1; 96.9 0.00017 5.7E-09 71.1 0.0 56 29-86 254-309 (332)
439 3a8t_A Adenylate isopentenyltr 96.6 0.00013 4.3E-09 72.0 -2.7 97 165-272 42-140 (339)
440 1ky9_A Protease DO, DEGP, HTRA 96.6 0.00091 3.1E-08 68.6 3.4 57 29-86 286-344 (448)
441 1znw_A Guanylate kinase, GMP k 96.3 0.008 2.7E-07 54.4 7.5 145 258-418 17-200 (207)
442 2dyb_A Neutrophil cytosol fact 96.2 0.0001 3.5E-09 72.9 -6.2 52 101-157 270-325 (341)
443 1k32_A Tricorn protease; prote 96.1 0.0076 2.6E-07 67.8 7.3 67 18-86 738-814 (1045)
444 3r6n_A Desmoplakin; spectrin r 96.0 0.0033 1.1E-07 64.3 3.4 54 95-160 281-334 (450)
445 4fln_A Protease DO-like 2, chl 96.0 0.026 8.9E-07 58.9 10.1 54 30-84 416-470 (539)
446 1ug1_A KIAA1010 protein; struc 95.9 0.005 1.7E-07 48.1 3.4 43 116-161 29-75 (92)
447 4fln_A Protease DO-like 2, chl 95.0 0.027 9.4E-07 58.7 6.3 68 18-87 254-345 (539)
448 3eph_A TRNA isopentenyltransfe 95.0 0.0013 4.5E-08 66.2 -3.6 91 263-370 5-96 (409)
449 3foz_A TRNA delta(2)-isopenten 94.9 0.0027 9.4E-08 61.7 -1.6 55 306-370 50-104 (316)
450 3crm_A TRNA delta(2)-isopenten 94.5 0.00082 2.8E-08 65.8 -6.5 97 165-272 7-104 (323)
451 3kfv_A Tight junction protein 93.6 0.064 2.2E-06 51.9 4.9 31 354-384 187-238 (308)
452 3exa_A TRNA delta(2)-isopenten 93.5 0.004 1.4E-07 60.6 -3.6 56 305-370 42-97 (322)
453 3tlx_A Adenylate kinase 2; str 93.3 0.011 3.8E-07 55.1 -0.9 87 165-275 31-121 (243)
454 4dey_A Voltage-dependent L-typ 92.2 0.074 2.5E-06 51.9 3.2 68 310-385 180-271 (337)
455 1zak_A Adenylate kinase; ATP:A 89.4 0.032 1.1E-06 50.8 -2.2 21 165-185 7-27 (222)
456 3dl0_A Adenylate kinase; phosp 89.3 0.1 3.5E-06 47.0 1.1 46 375-420 164-215 (216)
457 3d3q_A TRNA delta(2)-isopenten 88.6 0.028 9.6E-07 55.3 -3.4 97 165-272 9-106 (340)
458 3v9p_A DTMP kinase, thymidylat 88.2 0.15 5.2E-06 47.0 1.5 87 164-267 26-118 (227)
459 1kht_A Adenylate kinase; phosp 85.8 0.72 2.5E-05 40.0 4.5 25 393-417 165-191 (192)
460 3fb4_A Adenylate kinase; psych 85.6 0.12 4.1E-06 46.5 -0.8 46 375-420 164-215 (216)
461 2ze6_A Isopentenyl transferase 85.3 0.054 1.9E-06 50.7 -3.4 94 165-269 3-98 (253)
462 1nks_A Adenylate kinase; therm 83.9 0.085 2.9E-06 46.2 -2.6 20 166-185 4-23 (194)
463 4eaq_A DTMP kinase, thymidylat 81.8 0.15 5.3E-06 46.9 -1.8 43 376-420 180-225 (229)
464 3a8t_A Adenylate isopentenyltr 80.4 0.14 4.8E-06 50.2 -2.7 38 306-343 80-118 (339)
465 2v54_A DTMP kinase, thymidylat 75.2 0.31 1E-05 43.1 -1.9 22 165-186 6-27 (204)
466 1gvn_B Zeta; postsegregational 74.4 2.6 9E-05 39.9 4.4 37 340-376 83-121 (287)
467 3crm_A TRNA delta(2)-isopenten 70.9 0.37 1.3E-05 46.9 -2.6 54 307-370 46-99 (323)
468 2y3a_B Phosphatidylinositol 3- 68.7 0.0066 2.3E-07 58.7 -15.4 40 99-145 105-147 (302)
469 3lv8_A DTMP kinase, thymidylat 68.2 0.64 2.2E-05 43.0 -1.5 42 377-421 186-230 (236)
470 2z0h_A DTMP kinase, thymidylat 66.7 0.53 1.8E-05 41.2 -2.4 20 166-185 3-22 (197)
471 3lw7_A Adenylate kinase relate 62.4 26 0.0009 28.9 8.0 47 374-420 129-177 (179)
472 1a7j_A Phosphoribulokinase; tr 61.7 0.13 4.4E-06 49.2 -7.9 22 164-185 6-27 (290)
473 2f6r_A COA synthase, bifunctio 58.4 12 0.00042 34.9 5.5 25 396-420 244-269 (281)
474 2kt8_A Probable surface protei 54.1 6.8 0.00023 29.2 2.3 36 122-161 28-63 (76)
475 1wfw_A Kalirin-9A; SH3 domain, 51.6 20 0.00069 26.3 4.3 49 103-158 13-64 (74)
476 1rz3_A Hypothetical protein rb 50.7 3.8 0.00013 36.2 0.4 20 165-184 24-43 (201)
477 2krs_A Probable enterotoxin; a 49.7 7.1 0.00024 28.8 1.7 35 122-160 26-60 (74)
478 3h8z_A FragIle X mental retard 48.6 13 0.00044 30.8 3.3 26 120-145 58-87 (128)
479 4i1u_A Dephospho-COA kinase; s 43.2 19 0.00066 32.3 3.9 45 375-420 156-202 (210)
480 2kq8_A Cell WALL hydrolase; GF 42.5 3.8 0.00013 30.0 -0.8 35 122-160 27-61 (70)
481 3cxl_A N-chimerin; SH2, RHO-GA 38.6 1.3 4.4E-05 45.1 -5.3 33 124-161 8-40 (463)
482 1np6_A Molybdopterin-guanine d 37.2 1.6 5.3E-05 38.3 -4.3 85 165-260 8-95 (174)
483 2jmc_A Spectrin alpha chain, b 36.6 13 0.00044 27.4 1.4 22 97-125 52-73 (77)
484 3kb2_A SPBC2 prophage-derived 35.9 59 0.002 26.7 5.8 24 396-419 141-166 (173)
485 3dor_A Protein CT_858, CPAF; m 31.8 47 0.0016 34.5 5.1 40 18-62 85-124 (583)
486 3hdt_A Putative kinase; struct 29.3 2E+02 0.0067 25.6 8.4 24 396-419 193-218 (223)
487 2dun_A POL MU, DNA polymerase 28.2 31 0.001 28.7 2.4 58 377-434 28-91 (133)
488 3vaa_A Shikimate kinase, SK; s 25.6 1.9E+02 0.0064 24.6 7.4 45 375-420 149-196 (199)
489 3fdi_A Uncharacterized protein 25.1 2E+02 0.0067 24.9 7.5 25 396-420 173-199 (201)
490 2if2_A Dephospho-COA kinase; a 21.2 45 0.0016 28.7 2.4 48 376-424 148-196 (204)
491 1jjv_A Dephospho-COA kinase; P 21.1 78 0.0027 27.2 3.9 44 375-419 148-196 (206)
492 3onh_A Ubiquitin-activating en 21.0 66 0.0023 26.4 3.1 69 54-137 9-82 (127)
493 3ch4_B Pmkase, phosphomevalona 20.4 71 0.0024 28.4 3.5 27 395-421 164-191 (202)
No 1
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=100.00 E-value=1.3e-59 Score=513.03 Aligned_cols=345 Identities=29% Similarity=0.485 Sum_probs=288.2
Q ss_pred CCeEEEEeeCCCCccEEEEecCC-CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcCCceeee
Q psy4417 6 HPLKKILGTGLSPCGLTVEQDAN-GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSDGNIQFT 82 (440)
Q Consensus 6 ~~r~v~l~r~g~~lGiti~~~~~-~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~~~v~l~ 82 (440)
+++.|.+.+...+|||++.++.+ .+++|..|.+||+|+++|.|+.||+|++|||+++ .+++++..+|+..++.+.|.
T Consensus 307 ~~~~v~l~~~~~~lG~~i~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~e~~~~l~~~~~~v~L~ 386 (721)
T 2xkx_A 307 EPRRIVIHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTII 386 (721)
T ss_pred ceEEEEEEECCCCccEEEeccCCCCCeEEEEeCCCChHHhcCCCccCCEEEEECCEECCCCCHHHHHHHHHhcCCeEEEE
Confidence 56788888888899999987654 5799999999999999999999999999999999 46999999999888899988
Q ss_pred eccCCCC--------------------------CCCCCCccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCC
Q psy4417 83 IAPQGDD--------------------------ASLPIKPVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKD 136 (440)
Q Consensus 83 v~p~~~~--------------------------~~~~~~~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d 136 (440)
|...+.. ....++..+||||+|||++..|+.+|+ .+|+|++||||+|+++.|
T Consensus 387 v~r~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~~~~~~~~~~~vrAl~dy~~~~d~~~p~--~~LsF~~GDil~v~~~~~ 464 (721)
T 2xkx_A 387 AQYKPEEYSRFEAKIHDLREQLMNSSLGSGTASLRSNPKRGFYIRALFDYDKTKDCGFLS--QALSFRFGDVLHVIDAGD 464 (721)
T ss_pred EEeCchhhhhhhhhhhhhhhhcccccccCCccccccccccceeEEEeeccCcCCCCCCcc--ccccccCCCEEEEeecCC
Confidence 8754421 001235679999999999999998884 489999999999999999
Q ss_pred CCceEEEecCCC---CCCccccchhHHHhhhcccCCCcc----------------------------------ccccccc
Q psy4417 137 PNWWQAQLIEPT---GPMGLVPSQELEERRKAFVPPEAD----------------------------------YVHKIGI 179 (440)
Q Consensus 137 ~~ww~a~~~~~~---~~~G~iPs~~~~~rr~~~~~~~~~----------------------------------~~gk~~~ 179 (440)
++||+|++.+.. +..|+|||+++++++......... +.+|+++
T Consensus 465 ~~WW~a~~~~~~~~~~~~G~iPs~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~Ye~V~~~~~~~~r~vvl~GP~K~tl 544 (721)
T 2xkx_A 465 EEWWQARRVHSDSETDDIGFIPSKRRVERREWSRLKAKDWGSSSGSQGREDSVLSYETVTQMEVHYARPIIILGPTKDRA 544 (721)
T ss_pred CCeEEEEECCCCCccCccceeecHHHHHHHHhhhcccccccCcchhhcccccCCCceeeecccCCCCCEEEEECCCHHHH
Confidence 999999998543 467999999999876432211111 1124444
Q ss_pred ccccccccccccccccccCcccccCCCCCCCCCccCCCcceec-CHHHHHHhhhcCCeeEEEEEcCCccccchhhHHHHH
Q psy4417 180 CGTRYIKQYNTLQYNSTLMSRSFPDTTRPMRELEENGQNYWFT-SREVMERDIQDHKFLEYGEHNGHLYGTHLDSIREVI 258 (440)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~ttr~~r~~e~~g~~y~fv-s~~~f~~~i~~~~fle~~~~~g~~yg~~~~~i~~v~ 258 (440)
+..++.....++. ++++||||+||++|++|++|||+ |+++|++++++|+||||++++||+|||++++|++++
T Consensus 545 ~~~L~~~~~~~~~-------~~vs~TTR~~r~gE~~G~dY~Fv~s~~~f~~~i~~~~flE~~~~~g~~YGt~~~~v~~~~ 617 (721)
T 2xkx_A 545 NDDLLSEFPDKFG-------SCVPHTTRPKREYEIDGRDYHFVSSREKMEKDIRAHKFIEAGQYNSHLYGTSVQSVREVA 617 (721)
T ss_pred HHHHHHhCcccee-------ecccccccCCCCCccCCceeEEecCHHHHHHHHhcCCceEEEEECCccceeeHHHHHHHH
Confidence 4444433222343 58999999999999999999999 999999999999999999999999999999999999
Q ss_pred hcCCeEEeecCcchhhhhhhhhccccccccCCCceEEecCCCccceeecCCCcccchhhccCccccccCHHHHHHHHHcC
Q psy4417 259 LSGKICVLDCSPVGLFTFLLGLIEGTVTAKLIPYTYSIPICSWSSFFASDTTRPMRELEENGQNYWFTSREVMERDIQDH 338 (440)
Q Consensus 259 ~~g~~~il~~~~~g~~~l~~~l~~~~~~~~~~p~~i~i~~~~~~~f~~~~ttr~~~~~e~~g~~y~f~s~~~f~~~~~~~ 338 (440)
++|++|||+++++|++.| +...++|++| ||.|++ +..++. +
T Consensus 618 ~~g~~~ildi~~~~~~~l--------~~~~~~p~~i---------fi~pps---~~~L~~---------------l---- 658 (721)
T 2xkx_A 618 EQGKHCILDVSANAVRRL--------QAAHLHPIAI---------FIRPRS---LENVLE---------------I---- 658 (721)
T ss_pred HCCCcEEEeCCHHHHHHH--------HhcccCCEEE---------EEeCCc---HHHHHH---------------H----
Confidence 999999999999999988 5567889777 999998 655542 0
Q ss_pred ceeeEEEEcCccccccHHHHHHHHhcCCeeEecCCCcHHHHHHHHHHHHHHHHHhcCCccEEEEcCCHHHHHHHHHHHHH
Q psy4417 339 KFLEYGEHNGHLYGTHLDSIREVILSGKICVLDCSPVEEDIKRTLEESACLQRSYERFIDKVIVNEDFDETFRTVIELLD 418 (440)
Q Consensus 339 ~fle~~~~~~~~yGt~~~~i~~~~~~~~~~i~~~~~s~e~l~~~l~~~~~~e~~~~~~fd~vi~Nddl~~a~~~l~~~i~ 418 (440)
..+| +++++++|++++.++|+.+.+.||++|+|||+++|+++|+++|.
T Consensus 659 ----------~~R~----------------------t~~~~~~rl~~a~~~e~~~~~~fd~vi~Nd~l~~a~~~l~~~i~ 706 (721)
T 2xkx_A 659 ----------NKRI----------------------TEEQARKAFDRATKLEQEFTECFSAIVEGDSFEEIYHKVKRVIE 706 (721)
T ss_pred ----------hccC----------------------CHHHHHHHHHHHHHHHHhccccCcEEEECcCHHHHHHHHHHHHH
Confidence 0122 46789999999888899999999999999999999999999999
Q ss_pred hccCCCeeeecc
Q psy4417 419 TLSNKHQVDSRP 430 (440)
Q Consensus 419 ~~~~~~~wvp~~ 430 (440)
.++.+++|||++
T Consensus 707 ~~~~~~~Wvp~~ 718 (721)
T 2xkx_A 707 DLSGPYIWVPAR 718 (721)
T ss_pred hccCCcEEeecc
Confidence 999999999975
No 2
>3tvt_A Disks large 1 tumor suppressor protein; DLG, SRC-homology-3, guanylate kinase, phosphorylation-depen cell membrane; 1.60A {Drosophila melanogaster} PDB: 3uat_A*
Probab=100.00 E-value=9.9e-58 Score=445.76 Aligned_cols=257 Identities=33% Similarity=0.539 Sum_probs=203.9
Q ss_pred CCccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCC---CCCccccchhHHHhhhcccCCC
Q psy4417 94 IKPVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPT---GPMGLVPSQELEERRKAFVPPE 170 (440)
Q Consensus 94 ~~~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~---~~~G~iPs~~~~~rr~~~~~~~ 170 (440)
.+.++||||+|||+|..|+.+||+ ||+|++||||||+|+.|++||||++++.+ ...|+|||+.++||+.......
T Consensus 2 ~~~s~yvRa~fdY~~~~D~~~P~~--gL~F~~gDiL~V~~~~d~~wWqA~~v~~~~~~~~~GlIPS~~~~e~~~~~~~~~ 79 (292)
T 3tvt_A 2 QKRSLYVRALFDYDPNRDDGLPSR--GLPFKHGDILHVTNASDDEWWQARRVLGDNEDEQIGIVPSKRRWERKMRARDRS 79 (292)
T ss_dssp ---CCEEEECSCBCC-----------CCCBCTTCEEEEEECCSSSEEEECCCCC--------EEECHHHHHHHHHC----
T ss_pred CCceEEEEEeccCCCCCCCCCCCC--cCCcCCCCEEEEeecCCCCeEEEEEeCCCCCccceeEEeChHHHHHHHHHhhcc
Confidence 346899999999999999999998 89999999999999999999999998543 4589999999999765443211
Q ss_pred c-------------------------ccccccccccccccccccccccccccCcccccCCCCCCCCCccCCCcceec-CH
Q psy4417 171 A-------------------------DYVHKIGICGTRYIKQYNTLQYNSTLMSRSFPDTTRPMRELEENGQNYWFT-SR 224 (440)
Q Consensus 171 ~-------------------------~~~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~ttr~~r~~e~~g~~y~fv-s~ 224 (440)
. .|.||++++..|+.....+|. .+++||||+||++|+||++|||| ++
T Consensus 80 ~~~~~~~~~YE~V~~~~~~~~RpvVl~Gp~K~tl~~~Ll~~~p~~f~-------~sVs~TTR~pR~gE~dG~dY~Fv~s~ 152 (292)
T 3tvt_A 80 VKSEENVLSYEAVQRLSINYTRPVIILGPLKDRINDDLISEYPDKFG-------SCVPHTTRPKREYEVDGRDYHFVSSR 152 (292)
T ss_dssp ------CCCEEEEEEEECSSCCCEEEESTTHHHHHHHHHHHCTTTEE-------CCCCEECSCCCTTCCBTTTBEECSCH
T ss_pred ccccccccchheEEeccCCCCCeEEEeCCCHHHHHHHHHHhChhhcc-------ccccCCccCCcCCccCCccccccCCH
Confidence 0 233566666666655555555 59999999999999999999998 99
Q ss_pred HHHHHhhhcCCeeEEEEEcCCccccchhhHHHHHhcCCeEEeecCcchhhhhhhhhccccccccCCCceEEecCCCccce
Q psy4417 225 EVMERDIQDHKFLEYGEHNGHLYGTHLDSIREVILSGKICVLDCSPVGLFTFLLGLIEGTVTAKLIPYTYSIPICSWSSF 304 (440)
Q Consensus 225 ~~f~~~i~~~~fle~~~~~g~~yg~~~~~i~~v~~~g~~~il~~~~~g~~~l~~~l~~~~~~~~~~p~~i~i~~~~~~~f 304 (440)
++|++++++|.||||++++||+|||++++|++++++|++|||+++++|+++| +...++|++| |
T Consensus 153 e~fe~~i~~~~flE~a~~~gn~YGT~~~~V~~~~~~gk~viLdid~qg~~~l--------k~~~~~pi~I---------F 215 (292)
T 3tvt_A 153 EQMERDIQNHLFIEAGQYNDNLYGTSVASVREVAEKGKHCILDVSGNAIKRL--------QVAQLYPVAV---------F 215 (292)
T ss_dssp HHHHHHHHTTCEEEEEEETTEEEEEEHHHHHHHHHHTCEEEECCCTHHHHHH--------HHTTCCCEEE---------E
T ss_pred HHHHHHHhcCceEEEEEEccceeEEehHHHHHHHHcCCcEEEeccchhhhhc--------ccccccceEE---------E
Confidence 9999999999999999999999999999999999999999999999999999 5567788777 9
Q ss_pred eecCCCcccchhhccCccccccCHHHHHHHHHcCceeeEEEEcCccccccHHHHHHHHhcCCeeEecCCCcHHHHHHHHH
Q psy4417 305 FASDTTRPMRELEENGQNYWFTSREVMERDIQDHKFLEYGEHNGHLYGTHLDSIREVILSGKICVLDCSPVEEDIKRTLE 384 (440)
Q Consensus 305 ~~~~ttr~~~~~e~~g~~y~f~s~~~f~~~~~~~~fle~~~~~~~~yGt~~~~i~~~~~~~~~~i~~~~~s~e~l~~~l~ 384 (440)
|.|++ +..++.... ..+.++.+++++
T Consensus 216 I~PpS---~e~L~~r~~---------------------------------------------------~r~~e~~~~~~~ 241 (292)
T 3tvt_A 216 IKPKS---VDSVMEMNR---------------------------------------------------RMTEEQAKKTYE 241 (292)
T ss_dssp ECCSC---HHHHHHTCT---------------------------------------------------TSCTTHHHHHHH
T ss_pred EECCC---HHHHHHHHh---------------------------------------------------CCCchhHHHHHH
Confidence 99999 666543211 013456667777
Q ss_pred HHHHHHHHhcCCccEEEEcCCHHHHHHHHHHHHHhccCCCeeeecc
Q psy4417 385 ESACLQRSYERFIDKVIVNEDFDETFRTVIELLDTLSNKHQVDSRP 430 (440)
Q Consensus 385 ~~~~~e~~~~~~fd~vi~Nddl~~a~~~l~~~i~~~~~~~~wvp~~ 430 (440)
+++++++++.+.||++|+|||+++|+++|+++|..++.+++|||+.
T Consensus 242 r~~k~e~e~~~~fD~vIvNddle~a~~~l~~iI~~e~~~~~WVP~~ 287 (292)
T 3tvt_A 242 RAIKMEQEFGEYFTGVVQGDTIEEIYSKVKSMIWSQSGPTIWVPSK 287 (292)
T ss_dssp HHHHHHHHHTTTCSEEECCSSHHHHHHHHHHHHHHHTCSEEEEEC-
T ss_pred HHHHHHHhhhhhCCEEEECcCHHHHHHHHHHHHHHhhCCCeEecCc
Confidence 7778899999999999999999999999999999999999999974
No 3
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=100.00 E-value=2e-54 Score=445.38 Aligned_cols=325 Identities=18% Similarity=0.247 Sum_probs=236.2
Q ss_pred CCeEEEEeeCCCCccEEEEecCCCcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHh--cCCceee
Q psy4417 6 HPLKKILGTGLSPCGLTVEQDANGNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVK--SDGNIQF 81 (440)
Q Consensus 6 ~~r~v~l~r~g~~lGiti~~~~~~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~--~~~~v~l 81 (440)
++|.|.+.+. .+|||++.+++..+++|.+|.+||||+++| |+.||+|++|||.++ .++++++.+|+. .++.++|
T Consensus 1 ~~r~V~l~k~-~~lG~~i~gg~~~Gi~V~~V~~gspA~~aG-L~~GD~Il~VNG~~v~~~t~~e~~~~L~~~~~g~~v~L 78 (468)
T 3shw_A 1 SMKLVKFRKG-DSVGLRLAGGNDVGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTI 78 (468)
T ss_dssp CEEEEEEECC-SSCCEEEEEETTTEEEEEEECSSSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSEEEE
T ss_pred CceEEEEecC-CccceEEEccCcCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEE
Confidence 3567788775 899999999887889999999999999999 999999999999999 569999999997 6889999
Q ss_pred eeccCCCC----CCCCCCccccccccccCCCCCCCCCCCccccceeccCCEEEEeec---CCCCceEEEecCCCC---CC
Q psy4417 82 TIAPQGDD----ASLPIKPVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQ---KDPNWWQAQLIEPTG---PM 151 (440)
Q Consensus 82 ~v~p~~~~----~~~~~~~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~---~d~~ww~a~~~~~~~---~~ 151 (440)
+|.+.... .+...+..+|+||+|+|+|.... +|+|++||||||+|+ +|.+||+|++++.++ ..
T Consensus 79 ~V~r~g~~~~~~~~~~~g~s~yVralfdy~~~~~~-------~LsF~~GDIL~V~d~~~~~d~~wW~A~~~~~~~~~~~~ 151 (468)
T 3shw_A 79 LAQKKKDVYRRIVESDVGDSFYIRTHFEYEKESPY-------GLSFNKGEVFRVVDTLYNGKLGSWLAIRIGKNHKEVER 151 (468)
T ss_dssp EEEECHHHHHHHHHHTCCCCEEEEECSCBCCSSTT-------BCCBCTTCEEEEEESSGGGCTTEEEEEEECTTSCEEEE
T ss_pred EEEECCccchhhhccccccccccccccCcCCCCCC-------CceEccCCEEEEeecccCCCCCeEEEEEcCCCCccccc
Confidence 99875432 01123467999999999997754 999999999999998 788999999986654 68
Q ss_pred ccccchhHHHhhhcccCCCcccc-cc-cc---cccccccccc---------------ccccccc----------------
Q psy4417 152 GLVPSQELEERRKAFVPPEADYV-HK-IG---ICGTRYIKQY---------------NTLQYNS---------------- 195 (440)
Q Consensus 152 G~iPs~~~~~rr~~~~~~~~~~~-gk-~~---~~~~~~~~~~---------------~~~~~~~---------------- 195 (440)
|+|||++++||+..+........ +. .. .++.+..+++ .-..|+.
T Consensus 152 GlIPs~~~~e~~~~~~~~~~~~~~~~~~~f~~~~~~r~~kk~~~~~~~~~~~~~~~~~~~~YEeV~~~~~~~~r~iVlsG 231 (468)
T 3shw_A 152 GIIPNKNRAEQLASVQYTLPKTAGGDRADFWRFRGLRSSKRNLRKSREDLSAQPVQTKFPAYERVVLREAGFLRPVTIFG 231 (468)
T ss_dssp EEEECHHHHHHHHHHHHC-------------------------------------CCCCCSEEEEEEECCSSCCCEEEES
T ss_pred ceecCHHHHHHHHHHhhhhhccccccccchhhhccccccccccccchhhcccccccccCCCcceeEcccCCCCCEEEEEC
Confidence 99999999998765432100000 00 00 1111000000 0011221
Q ss_pred --------cc----CcccccCCCCCCCCCccCCCcceecCHHHHHHhhhcCCeeEEEEEcCCccccchhhHHHHHhcCCe
Q psy4417 196 --------TL----MSRSFPDTTRPMRELEENGQNYWFTSREVMERDIQDHKFLEYGEHNGHLYGTHLDSIREVILSGKI 263 (440)
Q Consensus 196 --------~~----~~~~~~~ttr~~r~~e~~g~~y~fvs~~~f~~~i~~~~fle~~~~~g~~yg~~~~~i~~v~~~g~~ 263 (440)
.| ...-.+.||| ||++|++|++||| |++++|++++++|++
T Consensus 232 PsG~Gl~~~Ll~~~p~~f~s~~TR-pR~gE~dG~~Y~F---------------------------Ts~~~V~~vl~~Gk~ 283 (468)
T 3shw_A 232 PIADVAREKLAREEPDIYQIAKSE-PRDAGTDQRSSGI---------------------------IRLHTIKQIIDQDKH 283 (468)
T ss_dssp TTHHHHHHHHHHHCTTTEEECCCB-C----------CB---------------------------CCHHHHHHHHTTTCE
T ss_pred CCHHHHHHHHHHhCCCceeeecCC-CCCcccccccCCc---------------------------ccHHHHHHHHHCCCe
Confidence 01 1112335799 9999999999998 799999999999999
Q ss_pred EEeecCcchhhhhhhhhccccccccCCCceEEecCCCccceeecCCCcccchhhccCccccccCHHHHHHHHHcCceeeE
Q psy4417 264 CVLDCSPVGLFTFLLGLIEGTVTAKLIPYTYSIPICSWSSFFASDTTRPMRELEENGQNYWFTSREVMERDIQDHKFLEY 343 (440)
Q Consensus 264 ~il~~~~~g~~~l~~~l~~~~~~~~~~p~~i~i~~~~~~~f~~~~ttr~~~~~e~~g~~y~f~s~~~f~~~~~~~~fle~ 343 (440)
|||+++++|+++| +...++|++| ||.||+ +.+++...
T Consensus 284 ~iLdId~qg~~~l--------~~~~~~p~~I---------FI~PPS---~e~L~~~~----------------------- 320 (468)
T 3shw_A 284 ALLDVTPNAVDRL--------NYAQWYPIVV---------FLNPDS---KQGVKTMR----------------------- 320 (468)
T ss_dssp EEECCCHHHHHHH--------HHTTCCCEEE---------EEECSC---HHHHHHHH-----------------------
T ss_pred EEEEeCHHHHHHH--------HhcCCCCEEE---------EEeCcC---HHHHHHHH-----------------------
Confidence 9999999999999 6577889877 999999 77665210
Q ss_pred EEEcCccccccHHHHHHHHhcCCeeEecCCCcHHHHHHHHHHHHHHHHHhcCCccEEEEcCCH-HHHHHHHHHHHHhccC
Q psy4417 344 GEHNGHLYGTHLDSIREVILSGKICVLDCSPVEEDIKRTLEESACLQRSYERFIDKVIVNEDF-DETFRTVIELLDTLSN 422 (440)
Q Consensus 344 ~~~~~~~yGt~~~~i~~~~~~~~~~i~~~~~s~e~l~~~l~~~~~~e~~~~~~fd~vi~Nddl-~~a~~~l~~~i~~~~~ 422 (440)
..+. ..+++.+++|++.+.++|.+|.++||++|+|||+ +.||++|+++|..+++
T Consensus 321 ----------------~rl~---------~~see~~~r~~~~a~~~e~~~~~~fD~vIvNddl~d~a~~~L~~ii~~~~~ 375 (468)
T 3shw_A 321 ----------------MRLC---------PESRKSARKLYERSHKLRKNNHHLFTTTINLNSMNDGWYGALKEAIQQQQN 375 (468)
T ss_dssp ----------------HHHC---------TTCCCCHHHHHHHHHHHHHHHGGGCSEEEECBTTBCHHHHHHHHHHHHHHT
T ss_pred ----------------hccC---------CCCHHHHHHHHHHHHHHHHhhhccCCEEEECCCcHHHHHHHHHHHHHHhcC
Confidence 0000 1245688889999888999999999999999999 5999999999999999
Q ss_pred CCeeeeccceecc
Q psy4417 423 KHQVDSRPTILMV 435 (440)
Q Consensus 423 ~~~wvp~~w~~~~ 435 (440)
++||||++|+.+.
T Consensus 376 ~~~WvP~~~~~~~ 388 (468)
T 3shw_A 376 QLVWVSEGKADGA 388 (468)
T ss_dssp SCEEEEC------
T ss_pred CCEEeCCcccccc
Confidence 9999999998764
No 4
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=100.00 E-value=4.4e-52 Score=422.44 Aligned_cols=322 Identities=17% Similarity=0.256 Sum_probs=243.4
Q ss_pred CCCCeEEEEeeCCCCccEEEEecCCCcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHh--cCCce
Q psy4417 4 PPHPLKKILGTGLSPCGLTVEQDANGNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVK--SDGNI 79 (440)
Q Consensus 4 ~~~~r~v~l~r~g~~lGiti~~~~~~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~--~~~~v 79 (440)
.++++.+.+.++ .+|||++.++.+.+++|.+|.+||||+++| |+.||+|++|||.++ .+++++..+|+. .+..+
T Consensus 7 ~~~~~~v~~~k~-~~lG~~i~gg~~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~e~~~~l~~~~~g~~v 84 (391)
T 3tsz_A 7 RPSMKLVKFRKG-DSVGLRLAGGNDVGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEV 84 (391)
T ss_dssp --CEEEEEEECC-SSCCEEEEEETTTEEEEEEECTTCHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSEE
T ss_pred CCCcEEEEeecC-CceeEEEEecCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhhcCCCeE
Confidence 345556666555 479999999878889999999999999999 999999999999999 579999999995 67789
Q ss_pred eeeeccCCCC----CCCCCCccccccccccCCCCCCCCCCCccccceeccCCEEEEeec---CCCCceEEEecCCCC---
Q psy4417 80 QFTIAPQGDD----ASLPIKPVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQ---KDPNWWQAQLIEPTG--- 149 (440)
Q Consensus 80 ~l~v~p~~~~----~~~~~~~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~---~d~~ww~a~~~~~~~--- 149 (440)
+|++...... .+...++.+|+||+|||++..+. +|+|++||||+|+|+ +|.+||+|++++.++
T Consensus 85 ~l~v~r~~~~~~~~~~~~~~~~~~vral~dy~~~~~~-------~Lsf~~Gdil~V~~~~~~~d~~wW~a~~~~~~~~~~ 157 (391)
T 3tsz_A 85 TILAQKKKDVYRRIVESDVGDSFYIRTHFEYEKESPY-------GLSFNKGEVFRVVDTLYNGKLGSWLAIRIGKNHKEV 157 (391)
T ss_dssp EEEEEECHHHHGGGTSSCCSCCEEEEECSCBCCSSTT-------BCCBCTTCEEEEEESSGGGSSSEEEEEEECGGGCEE
T ss_pred EEEEeeCCcccccccccccccccccccccccCCCCCC-------cceEccCCEEEEEeccCCCCCCeEEEEEeCCCCCcc
Confidence 9998765321 22234678999999999996654 999999999999998 789999999986533
Q ss_pred CCccccchhHHHhhhcccCCCcccc---cccccc--ccccc-----cccc----------cccccc--------------
Q psy4417 150 PMGLVPSQELEERRKAFVPPEADYV---HKIGIC--GTRYI-----KQYN----------TLQYNS-------------- 195 (440)
Q Consensus 150 ~~G~iPs~~~~~rr~~~~~~~~~~~---gk~~~~--~~~~~-----~~~~----------~~~~~~-------------- 195 (440)
..|+|||++++||+..+....+... .....+ +.+.. +... -..|+.
T Consensus 158 ~~G~IPs~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~k~~~~~~~~~~~~~~~~YE~V~~~~~~~~r~iVl 237 (391)
T 3tsz_A 158 ERGIIPNKNRAEQLASVQYTLPKTAGGDRADFWRFRGLRSSKRNLRKSREDLSAQPVQTKFPAYERVVLREAGFLRPVTI 237 (391)
T ss_dssp EEEEEECHHHHHHHHSSCCC---------------------------------------CCCSEEEEEEEECSSCCCEEE
T ss_pred cCCEecCHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccCCCcceEECcCCCCCCEEEE
Confidence 5899999999999877654321110 000011 00000 0000 012332
Q ss_pred ------cc----C---cccccCCCCCCCCCccCCCcceecCHHHHHHhhhcCCeeEEEEEcCCccccchhhHHHHHhcCC
Q psy4417 196 ------TL----M---SRSFPDTTRPMRELEENGQNYWFTSREVMERDIQDHKFLEYGEHNGHLYGTHLDSIREVILSGK 262 (440)
Q Consensus 196 ------~~----~---~~~~~~ttr~~r~~e~~g~~y~fvs~~~f~~~i~~~~fle~~~~~g~~yg~~~~~i~~v~~~g~ 262 (440)
++ . ......|||.||++|+||++|||+ ++++|++++++|+
T Consensus 238 sGPsg~tl~~~L~~~~p~~~~~~tr~pR~gE~dG~~Y~Fv---------------------------~~~~V~~~~~~Gk 290 (391)
T 3tsz_A 238 FGPIADVAREKLAREEPDIYQIAKSEPRDAGTDQRSSGII---------------------------RLHTIKQIIDQDK 290 (391)
T ss_dssp ESTTHHHHHHHHHHHCTTTEEECCCCCCCSSSCCC--CCC---------------------------CHHHHHHHHTTTC
T ss_pred ECCCHHHHHHHHHhhCccccccccCCCCCcccCCccCCcC---------------------------cHHHHHHHHHcCC
Confidence 11 1 011223799999999999999998 6899999999999
Q ss_pred eEEeecCcchhhhhhhhhccccccccCCCceEEecCCCccceeecCCCcccchhhccCccccccCHHHHHHHHHcCceee
Q psy4417 263 ICVLDCSPVGLFTFLLGLIEGTVTAKLIPYTYSIPICSWSSFFASDTTRPMRELEENGQNYWFTSREVMERDIQDHKFLE 342 (440)
Q Consensus 263 ~~il~~~~~g~~~l~~~l~~~~~~~~~~p~~i~i~~~~~~~f~~~~ttr~~~~~e~~g~~y~f~s~~~f~~~~~~~~fle 342 (440)
+|||+++++|+++| +...++|++| ||.||+ +.+++.. .
T Consensus 291 ~~iLdId~qg~~~l--------~~~~~~p~~I---------FI~PPS---~~~L~~~-~--------------------- 328 (391)
T 3tsz_A 291 HALLDVTPNAVDRL--------NYAQWYPIVV---------FLNPDS---KQGVKTM-R--------------------- 328 (391)
T ss_dssp EEEECCCHHHHHHH--------HHTTCCCEEE---------EEECCC---HHHHHHH-H---------------------
T ss_pred EEEEEeCHHHHHHH--------HhCCCCCEEE---------EEeCcC---HHHHHHH-H---------------------
Confidence 99999999999999 5577889877 999999 7776521 0
Q ss_pred EEEEcCccccccHHHHHHHHhcCCeeEecCCCcHHHHHHHHHHHHHHHHHhcCCccEEEEcCCHH-HHHHHHHHHHHhcc
Q psy4417 343 YGEHNGHLYGTHLDSIREVILSGKICVLDCSPVEEDIKRTLEESACLQRSYERFIDKVIVNEDFD-ETFRTVIELLDTLS 421 (440)
Q Consensus 343 ~~~~~~~~yGt~~~~i~~~~~~~~~~i~~~~~s~e~l~~~l~~~~~~e~~~~~~fd~vi~Nddl~-~a~~~l~~~i~~~~ 421 (440)
.+++ ..+++.+++|++.+.++|.+|.++||++|+|||++ .||++|+++|..++
T Consensus 329 -------~r~~-------------------~~s~e~~~~~~~~a~~~e~~~~~~fd~vivNd~l~~~a~~~l~~ii~~~~ 382 (391)
T 3tsz_A 329 -------MRLC-------------------PESRKSARKLYERSHKLRKNNHHLFTTTINLNSMNDGWYGALKEAIQQQQ 382 (391)
T ss_dssp -------HHHC-------------------SSCCCCHHHHHHHHHHHHHHHGGGCSEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred -------hcCC-------------------CCCHHHHHHHHHHHHHHHHhccccCcEEEECCCcHHHHHHHHHHHHHHhc
Confidence 0000 12455788888888899999999999999999998 79999999999999
Q ss_pred CCCeeeec
Q psy4417 422 NKHQVDSR 429 (440)
Q Consensus 422 ~~~~wvp~ 429 (440)
++|||||+
T Consensus 383 ~~~~Wvp~ 390 (391)
T 3tsz_A 383 NQLVWVSE 390 (391)
T ss_dssp HSEEEEEC
T ss_pred CCCeeccC
Confidence 99999996
No 5
>1kjw_A Postsynaptic density protein 95; protein-protein interaction, scaffold, neuropeptide; 1.80A {Rattus norvegicus} SCOP: b.34.2.1 c.37.1.1 PDB: 1jxm_A* 1jxo_A
Probab=100.00 E-value=6.8e-52 Score=406.24 Aligned_cols=254 Identities=31% Similarity=0.526 Sum_probs=211.9
Q ss_pred cccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCC---CCCccccchhHHHhhhcccCCCcc-
Q psy4417 97 VCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPT---GPMGLVPSQELEERRKAFVPPEAD- 172 (440)
Q Consensus 97 ~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~---~~~G~iPs~~~~~rr~~~~~~~~~- 172 (440)
++++||+|||+|..++.+| +.+|+|++||||+|+++.|++||+|++.+.+ +..|+|||+++++++.........
T Consensus 1 s~~vrAlydy~~~~~~~~p--~~eLsf~~GDil~V~~~~d~~WW~a~~~~~~~~~~~~G~iPsny~~e~~~~~~~~~~~~ 78 (295)
T 1kjw_A 1 GFYIRALFDYDKTKDCGFL--SQALSFRFGDVLHVIDAGDEEWWQARRVHSDSETDDIGFIPSKRRVERREWSRLKAKDW 78 (295)
T ss_dssp CEEEEESSCBCHHHHHCCC--SSBCCBCTTCEEEEEECCSSSEEEEEECCSSCCCSCCEEEECHHHHHHHHHTSCC---C
T ss_pred CEEEEEeeccCCCCCCCCC--CcCCcCCCCCEEEEEEeCCCCeEEEEECCCCCccCceeEeecHHHHHHHHHhhhccccc
Confidence 4789999999999888788 5599999999999999999999999998543 478999999999986544321111
Q ss_pred ---------------------------------cccccccccccccccccccccccccCcccccCCCCCCCCCccCCCcc
Q psy4417 173 ---------------------------------YVHKIGICGTRYIKQYNTLQYNSTLMSRSFPDTTRPMRELEENGQNY 219 (440)
Q Consensus 173 ---------------------------------~~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~ttr~~r~~e~~g~~y 219 (440)
|.||+++++.++......+. .+++||||+||+||++|++|
T Consensus 79 ~~~~~~~~~~~~~~~Ye~V~~~~~~~~r~ivl~GPgK~tl~~~L~~~~~~~~~-------~~vs~TTR~~R~gE~~G~dY 151 (295)
T 1kjw_A 79 GSSSGSQGREDSVLSYETVTQMEVHYARPIIILGPTKDRANDDLLSEFPDKFG-------SCVPHTTRPKREYEIDGRDY 151 (295)
T ss_dssp CSCCSSCCCCCCCCCEEEEEEEECCSCCCEEEESTTHHHHHHHHHHHCTTTEE-------CCCCEECSCCCTTCCBTTTB
T ss_pred CcccccccccCCCCCcceeeeecCCCCCEEEEECCCHHHHHHHHHhhCcccee-------eeeeecccCCCCccccCcee
Confidence 12444554444433222343 58999999999999999999
Q ss_pred eec-CHHHHHHhhhcCCeeEEEEEcCCccccchhhHHHHHhcCCeEEeecCcchhhhhhhhhccccccccCCCceEEecC
Q psy4417 220 WFT-SREVMERDIQDHKFLEYGEHNGHLYGTHLDSIREVILSGKICVLDCSPVGLFTFLLGLIEGTVTAKLIPYTYSIPI 298 (440)
Q Consensus 220 ~fv-s~~~f~~~i~~~~fle~~~~~g~~yg~~~~~i~~v~~~g~~~il~~~~~g~~~l~~~l~~~~~~~~~~p~~i~i~~ 298 (440)
||| |+++|++++++|+||||++++||+|||++++|++++++|++|||+++++|++.+ +...++|++|
T Consensus 152 ~Fv~s~eef~~~i~~g~flE~~~~~g~~YGt~~~~V~~~~~~G~~vildid~~g~~~l--------~~~~~~pi~I---- 219 (295)
T 1kjw_A 152 HFVSSREKMEKDIQAHKFIEAGQYNSHLYGTSVQSVREVAEQGKHCILDVSANAVRRL--------QAAHLHPIAI---- 219 (295)
T ss_dssp EECSCHHHHHHHHHTTCEEEEEEETTEEEEEEHHHHHHHHHTTCEEEECCCTTHHHHH--------HHTTCCCEEE----
T ss_pred EecCCHHHHHHHHHCCCcEEEEEEcCcEeeeeHHHHHHHHhcCCeEEEEeCHHHHHHH--------HhcccCCeEE----
Confidence 999 999999999999999999999999999999999999999999999999999888 4456788777
Q ss_pred CCccceeecCCCcccchhhccCccccccCHHHHHHHHHcCceeeEEEEcCccccccHHHHHHHHhcCCeeEecCCCcHHH
Q psy4417 299 CSWSSFFASDTTRPMRELEENGQNYWFTSREVMERDIQDHKFLEYGEHNGHLYGTHLDSIREVILSGKICVLDCSPVEED 378 (440)
Q Consensus 299 ~~~~~f~~~~ttr~~~~~e~~g~~y~f~s~~~f~~~~~~~~fle~~~~~~~~yGt~~~~i~~~~~~~~~~i~~~~~s~e~ 378 (440)
||.|++ +..++. + ..+| ++++
T Consensus 220 -----fI~pps---~~~L~~---------------L--------------~~R~----------------------t~~~ 240 (295)
T 1kjw_A 220 -----FIRPRS---LENVLE---------------I--------------NKRI----------------------TEEQ 240 (295)
T ss_dssp -----EECCSS---HHHHHH---------------H--------------CTTS----------------------CHHH
T ss_pred -----EEECCC---HHHHHH---------------H--------------HhcC----------------------CHHH
Confidence 999998 655542 0 0122 4678
Q ss_pred HHHHHHHHHHHHHHhcCCccEEEEcCCHHHHHHHHHHHHHhccCCCeeeecc
Q psy4417 379 IKRTLEESACLQRSYERFIDKVIVNEDFDETFRTVIELLDTLSNKHQVDSRP 430 (440)
Q Consensus 379 l~~~l~~~~~~e~~~~~~fd~vi~Nddl~~a~~~l~~~i~~~~~~~~wvp~~ 430 (440)
+++|++.+.++|..+.+.||++|+|||+++|+++|+++|..++.+++|||++
T Consensus 241 i~~rl~~a~~~e~~~~~~fd~vivNd~le~a~~~l~~ii~~~~~~~~Wvp~~ 292 (295)
T 1kjw_A 241 ARKAFDRATKLEQEFTECFSAIVEGDSFEEIYHKVKRVIEDLSGPYIWVPAR 292 (295)
T ss_dssp HHHHHHHHHHHHHHHGGGCSEEECCSSHHHHHHHHHHHHHHHSCSEEEEECS
T ss_pred HHHHHHHHHHHHHhccccCeEEEECcCHHHHHHHHHHHHHhccCCCEEeeCC
Confidence 9999999877888899999999999999999999999999999999999975
No 6
>1ex7_A Guanylate kinase; substrate-induced FIT, domain movement, GMP, ATP, substrate specificity, X-RAY diffraction, transferase; HET: 5GP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1ex6_A* 1gky_A* 3sqk_A 4f4j_A
Probab=100.00 E-value=1.1e-35 Score=272.06 Aligned_cols=181 Identities=26% Similarity=0.400 Sum_probs=151.6
Q ss_pred cccCCCcccccccccccccccccccccccccccCcccccCCCCCCCCCccCCCcceecCHHHHHHhhhcCCeeEEEEEcC
Q psy4417 165 AFVPPEADYVHKIGICGTRYIKQYNTLQYNSTLMSRSFPDTTRPMRELEENGQNYWFTSREVMERDIQDHKFLEYGEHNG 244 (440)
Q Consensus 165 ~~~~~~~~~~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~ttr~~r~~e~~g~~y~fvs~~~f~~~i~~~~fle~~~~~g 244 (440)
.+++.||+|+||+++++.++.+....+. .+++||||+||++|++|++|||+|+++|++++++|+|+||++++|
T Consensus 3 pIVi~GPSG~GK~Tl~~~L~~~~~~~~~-------~svs~TTR~pR~gE~~G~dY~Fvs~~eF~~~i~~g~flE~~~~~g 75 (186)
T 1ex7_A 3 PIVISGPSGTGKSTLLKKLFAEYPDSFG-------FSVSSTTRTPRAGEVNGKDYNFVSVDEFKSMIKNNEFIEWAQFSG 75 (186)
T ss_dssp CEEEECCTTSSHHHHHHHHHHHCTTTEE-------ECCCEECSCCCTTCCBTTTBEECCHHHHHHHHHTTCEEEEEEETT
T ss_pred EEEEECCCCCCHHHHHHHHHHhCCCCeE-------EEEEEeccCCCCCCcCCceeEeecHHHHHHHHHcCCEEEEEEEcC
Confidence 4678899999999999988766555566 499999999999999999999999999999999999999999999
Q ss_pred CccccchhhHHHHHhcCCeEEeecCcchhhhhhhhhcccccc-ccCCCceEEecCCCccceeecCCCcccchhhccCccc
Q psy4417 245 HLYGTHLDSIREVILSGKICVLDCSPVGLFTFLLGLIEGTVT-AKLIPYTYSIPICSWSSFFASDTTRPMRELEENGQNY 323 (440)
Q Consensus 245 ~~yg~~~~~i~~v~~~g~~~il~~~~~g~~~l~~~l~~~~~~-~~~~p~~i~i~~~~~~~f~~~~ttr~~~~~e~~g~~y 323 (440)
++|||++++|++++++|++||++++++|++++ +. ..+.+.+| |+.|++ +..++.+
T Consensus 76 ~~YGt~~~~v~~~l~~g~~vil~id~~g~~~~--------k~~~~~~~~~I---------fi~pps---~e~L~~R---- 131 (186)
T 1ex7_A 76 NYYGSTVASVKQVSKSGKTCILDIDMQGVKSV--------KAIPELNARFL---------FIAPPS---VEDLKKR---- 131 (186)
T ss_dssp EEEEEEHHHHHHHHHHTSEEEEECCHHHHHHH--------HTCGGGCCEEE---------EEECSC---HHHHHHH----
T ss_pred ceeeeecceeeehhhCCCEEEecCCHHHHHHH--------HHhcccCceEE---------EEeCCC---HHHHHHH----
Confidence 99999999999999999999999999999998 21 23445555 999998 7666532
Q ss_pred cccCHHHHHHHHHcCceeeEEEEcCccccccHHHHHHHHhcCCeeEecCCCcHHHHHHHHHHHHH-HHHHhcCCccEEEE
Q psy4417 324 WFTSREVMERDIQDHKFLEYGEHNGHLYGTHLDSIREVILSGKICVLDCSPVEEDIKRTLEESAC-LQRSYERFIDKVIV 402 (440)
Q Consensus 324 ~f~s~~~f~~~~~~~~fle~~~~~~~~yGt~~~~i~~~~~~~~~~i~~~~~s~e~l~~~l~~~~~-~e~~~~~~fd~vi~ 402 (440)
+. .+|+ .+.+++++||..+.. ++....+.||++|+
T Consensus 132 ----------L~--------------~Rg~--------------------e~~e~i~~Rl~~a~~e~~~~~~~~fD~vIv 167 (186)
T 1ex7_A 132 ----------LE--------------GRGT--------------------ETEESINKRLSAAQAELAYAETGAHDKVIV 167 (186)
T ss_dssp ----------HH--------------HHCC--------------------SCHHHHHHHHHHHHHHHHHHTTTCSSEEEE
T ss_pred ----------HH--------------hcCC--------------------CCHHHHHHHHHHHHHHHhhccccCCcEEEE
Confidence 11 1222 378999999988643 44445568999999
Q ss_pred cCCHHHHHHHHHHHHHhc
Q psy4417 403 NEDFDETFRTVIELLDTL 420 (440)
Q Consensus 403 Nddl~~a~~~l~~~i~~~ 420 (440)
|||+++|+++|+++|..+
T Consensus 168 Nddle~a~~~l~~iI~ae 185 (186)
T 1ex7_A 168 NDDLDKAYKELKDFIFAE 185 (186)
T ss_dssp CSSHHHHHHHHHHHHTTC
T ss_pred CcCHHHHHHHHHHHHHhc
Confidence 999999999999999743
No 7
>3kfv_A Tight junction protein ZO-3; structural genomics consortium, SGC, cell junction, cell membrane, membrane, SH3 domain; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.1e-35 Score=290.33 Aligned_cols=244 Identities=16% Similarity=0.288 Sum_probs=156.8
Q ss_pred CccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCC---------ceEEEecCCCC---CCccccchhHHHh
Q psy4417 95 KPVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPN---------WWQAQLIEPTG---PMGLVPSQELEER 162 (440)
Q Consensus 95 ~~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~---------ww~a~~~~~~~---~~G~iPs~~~~~r 162 (440)
++++||||+|||+|..+. +|+|++||||||+|+.+++ ||+|++++.++ ..|+|||++++|+
T Consensus 2 gdsfyVRalfdy~~~~~~-------eL~F~kGDil~V~dt~~~~~~~~~~~~gwW~A~~~~~~~~~~~~G~IPs~~~aeq 74 (308)
T 3kfv_A 2 GDSFYIRTHFELEPSPPS-------GLGFTRGDVFHVLDTLHPGPGQSHARGGHWLAVRMGRDLREQERGIIPNQSRAEQ 74 (308)
T ss_dssp -CCEEEEECSCBCCCSSS-------BCCBCTTCEEEEEEC-------------CEEEEEECTTSCEEEEEEECCHHHHHH
T ss_pred CccEEEEEecCcCCCCcc-------cCCCccCCEEEEccccCCCcccccccCceEEEEecCCCCCcCCCCeeechHHHHH
Confidence 578999999999998665 9999999999999988776 99999986543 6899999999998
Q ss_pred hhcccCCCcc---cccc---ccccccccccc-----ccc------------------cccccccCcccccCCCCCCCCCc
Q psy4417 163 RKAFVPPEAD---YVHK---IGICGTRYIKQ-----YNT------------------LQYNSTLMSRSFPDTTRPMRELE 213 (440)
Q Consensus 163 r~~~~~~~~~---~~gk---~~~~~~~~~~~-----~~~------------------~~~~~~~~~~~~~~ttr~~r~~e 213 (440)
+..+...... +.++ ....+.+++++ .++ ..|+ .++....-.+||--
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~r~~f~~~~~~r~~~k~~~~~~~~d~~~~~~~~~~~~YE-----~V~~~~~~~~RPvV 149 (308)
T 3kfv_A 75 LASLEAAQRAVGVGPGSSAGSNARAEFWRLRGLRRGAKKTTQRSREDLSALTRQGRYPPYE-----RVVLREASFKRPVV 149 (308)
T ss_dssp HHHHHHHHCC-----------------------------------CCCHHHHHHHTCCSEE-----EEEEEECSSCCCEE
T ss_pred HHHHHHhhhhcccccccccccccccchhhhccccccccccccccccccccccccCCCcCch-----heeccccCCCCeEE
Confidence 7544321100 0111 00011111100 011 1122 12222222223321
Q ss_pred cCC---------------CcceecCHHHHHHhhhcCCeeEEEEEcCCccccchhhHHHHHhcCCeEEeecCcchhhhhhh
Q psy4417 214 ENG---------------QNYWFTSREVMERDIQDHKFLEYGEHNGHLYGTHLDSIREVILSGKICVLDCSPVGLFTFLL 278 (440)
Q Consensus 214 ~~g---------------~~y~fvs~~~f~~~i~~~~fle~~~~~g~~yg~~~~~i~~v~~~g~~~il~~~~~g~~~l~~ 278 (440)
.-| ..|-|.- .+.+.+++++|| ++++|++++++|++|||+++++|+++|
T Consensus 150 l~GP~k~~l~~~L~~~~P~~F~~~v--~~~r~i~~~~fi------------s~~~V~~vl~~Gk~~ILDId~QGa~~l-- 213 (308)
T 3kfv_A 150 ILGPVADIAMQKLTAEMPDQFEIAE--TVSRTDSPSKII------------KLDTVRVIAEKDKHALLDVTPSAIERL-- 213 (308)
T ss_dssp EESTTHHHHHHHHHHHCTTTEEECC--CC--------CC------------CHHHHHHHHHTTCEEEECCCHHHHHHH--
T ss_pred EeCccHHHHHHHHHHhCcccccccc--cccccccCCCee------------cHHHHHHHHHCCCcEEEEECHHHHHHH--
Confidence 111 1122210 033345666665 899999999999999999999999999
Q ss_pred hhccccccccCCCceEEecCCCccceeecCCCcccchhhccCccccccCHHHHHHHHHcCceeeEEEEcCccccccHHHH
Q psy4417 279 GLIEGTVTAKLIPYTYSIPICSWSSFFASDTTRPMRELEENGQNYWFTSREVMERDIQDHKFLEYGEHNGHLYGTHLDSI 358 (440)
Q Consensus 279 ~l~~~~~~~~~~p~~i~i~~~~~~~f~~~~ttr~~~~~e~~g~~y~f~s~~~f~~~~~~~~fle~~~~~~~~yGt~~~~i 358 (440)
+...++|++| ||.||+ +.+++.. . .+++
T Consensus 214 ------k~~~~~pi~I---------FI~PPS---~eeL~~r-r----------------------------~R~~----- 241 (308)
T 3kfv_A 214 ------NYVQYYPIVV---------FFIPES---RPALKAL-R----------------------------QWLA----- 241 (308)
T ss_dssp ------HHTTCCCEEE---------EEEESC---HHHHHHH-H----------------------------HHHS-----
T ss_pred ------HhcCCCCEEE---------EEeCCC---HHHHHHH-H----------------------------hcCC-----
Confidence 5567888777 999999 7776631 0 0111
Q ss_pred HHHHhcCCeeEecCCCcHHHHHHHHHHHHHHHHHhcCCccEEE-EcCCHHHHHHHHHHHHHhccCCCeeeeccce
Q psy4417 359 REVILSGKICVLDCSPVEEDIKRTLEESACLQRSYERFIDKVI-VNEDFDETFRTVIELLDTLSNKHQVDSRPTI 432 (440)
Q Consensus 359 ~~~~~~~~~~i~~~~~s~e~l~~~l~~~~~~e~~~~~~fd~vi-~Nddl~~a~~~l~~~i~~~~~~~~wvp~~w~ 432 (440)
..+++.++++++.+.++|.+|.+.|||+| +|||++.||++|+++|..++++|||||++-+
T Consensus 242 --------------~esee~~~r~~~aa~eiE~~~~~~FD~vI~VNDdle~A~~~L~~iI~~~~~epqWvp~~~~ 302 (308)
T 3kfv_A 242 --------------PASRRSTRRLYAQAQKLRKHSSHLFTATIPLNGTSDTWYQELKAIIREQQTRPIWTAEDQL 302 (308)
T ss_dssp --------------TTCCCCHHHHHHHHHHHHHHHGGGCSEEEEECSSSTHHHHHHHHHHHHHTTSEEEEEC---
T ss_pred --------------CCCHHHHHHHHHHHHHHHHhhhccCcEEEEcCCCHHHHHHHHHHHHHHhcCCCeEeehhhh
Confidence 11445677888887789999999999999 9999999999999999999999999998754
No 8
>4dey_A Voltage-dependent L-type calcium channel subunit; maguk, voltage dependent calcium channel, transport protein; 1.95A {Oryctolagus cuniculus} PDB: 4dex_A 1t3l_A 1t3s_A 1vyv_A 1vyu_A 1vyt_A 1t0h_B 1t0j_B 1t0h_A 1t0j_A
Probab=100.00 E-value=1.1e-33 Score=277.11 Aligned_cols=247 Identities=14% Similarity=0.240 Sum_probs=164.3
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHHhhhcccCCCccccc
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEERRKAFVPPEADYVH 175 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~rr~~~~~~~~~~~g 175 (440)
..++|||+|||+|..|+.+||++++|+|++||||+|+++.|++||+|++++.++..|+|||+++.|+....+... ..+|
T Consensus 37 ~~~~vrAlfdY~~~~d~d~P~~e~~LsF~~GDiL~V~~~~d~~WWqar~~~~~g~~GlIPS~~~~E~~~~~~~~~-~~~~ 115 (337)
T 4dey_A 37 VAFAVRTNVSYSAAHEDDVPVPGMAISFEAKDFLHVKEKFNNDWWIGRLVKEGCEIGFIPSPVKLENMRLQHEQR-AKEF 115 (337)
T ss_dssp CCEEEEESSCBCCCGGGCCSSTTCBCCBCTTCEEEEEEECSSSEEEEEESSTTCCCEEEECHHHHHHHHHHHHHH-CC--
T ss_pred ccEEEEEccccCCCCCCCCCcccccccccCCCEEEEEecCCCCeEEEEECCCCCCccEecCHHHHHHHHHhhhhc-cccC
Confidence 568999999999999999999999999999999999999999999999987767899999999988655433110 0011
Q ss_pred ccc---ccccccccccccccccc--------------------------------ccCcccccCCCCCCCCCccCCCcc-
Q psy4417 176 KIG---ICGTRYIKQYNTLQYNS--------------------------------TLMSRSFPDTTRPMRELEENGQNY- 219 (440)
Q Consensus 176 k~~---~~~~~~~~~~~~~~~~~--------------------------------~~~~~~~~~ttr~~r~~e~~g~~y- 219 (440)
+.+ -...++.+......|.. .-+...|++ ||.++..+..++.|
T Consensus 116 ~~~~~~~~~~~~~k~~~~~~Ye~vp~~RPvvlvGP~~~g~~~td~m~~~l~d~l~~~F~~~i~~-tR~~~d~~~~~r~~~ 194 (337)
T 4dey_A 116 KLHSKEKRMPFFKKTEHTPPYDVVPSMRPVVLVGPSLKGYEVTDMMQKALFDFLKHRFEGRISI-TRVTADISLAKRSVL 194 (337)
T ss_dssp -----------------CCSEEEECSSCCEEEECSSCTTSHHHHHHHHHHHHHHHHHTTTSEEE-EEECSCGGGC-----
T ss_pred CCCcccccccccccCCCCCCccccCCCCceEEECCccccchhHHHHHHHHHHhhHHhcCCccce-Eeecchhhhcchhhh
Confidence 100 00000000001111111 001144544 48888888888764
Q ss_pred -eecCHHHHHHhhhcCCeeEEEEEcCCccccchhhHHHHHhcCCeEEeecCcc-hhhhhhhhhccccccccCCCceEEec
Q psy4417 220 -WFTSREVMERDIQDHKFLEYGEHNGHLYGTHLDSIREVILSGKICVLDCSPV-GLFTFLLGLIEGTVTAKLIPYTYSIP 297 (440)
Q Consensus 220 -~fvs~~~f~~~i~~~~fle~~~~~g~~yg~~~~~i~~v~~~g~~~il~~~~~-g~~~l~~~l~~~~~~~~~~p~~i~i~ 297 (440)
+++++..|++.+.++.|+| +++.+++|.++.++|++|||+++++ |+++| +...+.|++|
T Consensus 195 ~~~~~~~~~e~~~~~~~~~e--------v~seVe~i~~v~~~Gk~vILDIDvQnGa~ql--------k~~~~~~i~I--- 255 (337)
T 4dey_A 195 NNPSKHAIIERSNTRSSLAE--------VQSEIERIFELARTLQLVVLDADTINHPAQL--------SKTSLAPIVV--- 255 (337)
T ss_dssp --------------CCCHHH--------HHHHHHHHHHHTTTCCEEEEEETTCCSGGGT--------TTSSCCCEEE---
T ss_pred hcccchhhhcccccccchHH--------HHhHHHHHHHHHhCCCEEEEEeCcHHHHHHH--------HhcCCCCEEE---
Confidence 6788999999888888775 5577888888999999999999999 99999 4344455555
Q ss_pred CCCccceeecCCCcccchhhccCccccccCHHHHHHHHHcCceeeEEEEcCccccccHHHHHHHHhcCCeeEecCCCcHH
Q psy4417 298 ICSWSSFFASDTTRPMRELEENGQNYWFTSREVMERDIQDHKFLEYGEHNGHLYGTHLDSIREVILSGKICVLDCSPVEE 377 (440)
Q Consensus 298 ~~~~~~f~~~~ttr~~~~~e~~g~~y~f~s~~~f~~~~~~~~fle~~~~~~~~yGt~~~~i~~~~~~~~~~i~~~~~s~e 377 (440)
||.||+ +.+++.+- ..+||. +.+
T Consensus 256 ------FI~PPS---~eeLe~RL----------------------------~~RGt~--------------------~~~ 278 (337)
T 4dey_A 256 ------YVKISS---PKVLQRLI----------------------------KSRGKS--------------------QAK 278 (337)
T ss_dssp ------EECCSC---HHHHHHHH----------------------------HTTCHH--------------------HHT
T ss_pred ------EEECcC---HHHHHHHH----------------------------HhCCch--------------------HHH
Confidence 999999 77776431 123431 355
Q ss_pred HHHHHHHHHHHHHHHhcCCccEEEEcCCHHHHHHHHHHHHHhc
Q psy4417 378 DIKRTLEESACLQRSYERFIDKVIVNEDFDETFRTVIELLDTL 420 (440)
Q Consensus 378 ~l~~~l~~~~~~e~~~~~~fd~vi~Nddl~~a~~~l~~~i~~~ 420 (440)
.|.++++.+..+...+.+.|||+|+|||++.||++|+++|...
T Consensus 279 rl~~al~~ae~E~~~~~~~FDyvIVNDdLe~A~~~L~~iI~~~ 321 (337)
T 4dey_A 279 HLNVQMVAADKLAQCPPELFDVILDENQLEDACEHLADYLEAY 321 (337)
T ss_dssp THHHHHHHHHHHHHSCGGGCSEEECCSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCcccCCEEEECCCHHHHHHHHHHHHHHH
Confidence 6777777765555567899999999999999999999999753
No 9
>3ney_A 55 kDa erythrocyte membrane protein; structural genomics consortium, SGC, 55 kDa erythrocyte MEMB protein; 2.26A {Homo sapiens} SCOP: c.37.1.0
Probab=100.00 E-value=5.6e-33 Score=256.02 Aligned_cols=179 Identities=28% Similarity=0.464 Sum_probs=149.6
Q ss_pred hhcccCCCcccccccccccccccccccccccccccCcccccCCCCCCCCCccCCCcceecCHHHHHHhhhcCCeeEEEEE
Q psy4417 163 RKAFVPPEADYVHKIGICGTRYIKQYNTLQYNSTLMSRSFPDTTRPMRELEENGQNYWFTSREVMERDIQDHKFLEYGEH 242 (440)
Q Consensus 163 r~~~~~~~~~~~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~ttr~~r~~e~~g~~y~fvs~~~f~~~i~~~~fle~~~~ 242 (440)
.+.+++.||+++||++++..+.......+. .++++|||+||++|.+|.+|+|++.++|++++..+.|+||+++
T Consensus 19 g~~ivl~GPSGaGKsTL~~~L~~~~~~~~~-------~~vs~TTR~p~~gE~~G~~y~fvs~~~f~~~i~~~~fle~~~~ 91 (197)
T 3ney_A 19 RKTLVLIGASGVGRSHIKNALLSQNPEKFV-------YPVPYTTRPPRKSEEDGKEYHFISTEEMTRNISANEFLEFGSY 91 (197)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHHCTTTEE-------CCCCEECSCCCTTCCTTSSCEECCHHHHHHHHHTTCEEEEEEE
T ss_pred CCEEEEECcCCCCHHHHHHHHHhhCCccEE-------eeecccccCCcCCeeccccceeccHHHhhhhhhhhhhhhhhhh
Confidence 446678899999999999887655333344 4899999999999999999999999999999999999999999
Q ss_pred cCCccccchhhHHHHHhcCCeEEeecCcchhhhhhhhhccccccccCCCceEEecCCCccceeecCCCcccchhhccCcc
Q psy4417 243 NGHLYGTHLDSIREVILSGKICVLDCSPVGLFTFLLGLIEGTVTAKLIPYTYSIPICSWSSFFASDTTRPMRELEENGQN 322 (440)
Q Consensus 243 ~g~~yg~~~~~i~~v~~~g~~~il~~~~~g~~~l~~~l~~~~~~~~~~p~~i~i~~~~~~~f~~~~ttr~~~~~e~~g~~ 322 (440)
.||+|||+.++|++++++|++|||+++++|++++ +...+.|.+| ||.||+ ...+.
T Consensus 92 ~~n~YGt~~~~v~~~l~~G~~vildid~qg~~~~--------~~~~~~~~~I---------fi~Pps---~~~~~----- 146 (197)
T 3ney_A 92 QGNMFGTKFETVHQIHKQNKIAILDIEPQTLKIV--------RTAELSPFIV---------FIAPTD---QGTQT----- 146 (197)
T ss_dssp TTEEEEEEHHHHHHHHHTTCEEEEECCGGGHHHH--------CSTTTCEEEE---------EEEECC---BSSCC-----
T ss_pred hceecccchhhHHHHHhcCCeEEEEECHHHHHHH--------HhcCCCceEE---------EEeCCC---ccccc-----
Confidence 9999999999999999999999999999999998 5444556555 999998 32110
Q ss_pred ccccCHHHHHHHHHcCceeeEEEEcCccccccHHHHHHHHhcCCeeEecCCCcHHHHHHHHHHHHHHHHHhcCCccEEEE
Q psy4417 323 YWFTSREVMERDIQDHKFLEYGEHNGHLYGTHLDSIREVILSGKICVLDCSPVEEDIKRTLEESACLQRSYERFIDKVIV 402 (440)
Q Consensus 323 y~f~s~~~f~~~~~~~~fle~~~~~~~~yGt~~~~i~~~~~~~~~~i~~~~~s~e~l~~~l~~~~~~e~~~~~~fd~vi~ 402 (440)
.+.+++.+|+ ++++..+.+.||++|+
T Consensus 147 ---------------------------------------------------e~~~~i~~r~---~~~~~~~~~~fd~viv 172 (197)
T 3ney_A 147 ---------------------------------------------------EALQQLQKDS---EAIRSQYAHYFDLSLV 172 (197)
T ss_dssp ---------------------------------------------------HHHHHHHHHH---HHHHHHHGGGCSEEEE
T ss_pred ---------------------------------------------------hHHHHHHHHH---HHHHHhhccCCCEEEE
Confidence 0234555555 4456668889999999
Q ss_pred cCCHHHHHHHHHHHHHhccCCCeee
Q psy4417 403 NEDFDETFRTVIELLDTLSNKHQVD 427 (440)
Q Consensus 403 Nddl~~a~~~l~~~i~~~~~~~~wv 427 (440)
|||+++|+++|+++|.+++++||||
T Consensus 173 Nd~l~~a~~~l~~ii~~~~~~pqWv 197 (197)
T 3ney_A 173 NNGVDETLKKLQEAFDQACSSPQWV 197 (197)
T ss_dssp ESCHHHHHHHHHHHHHHCCCCCC--
T ss_pred CCCHHHHHHHHHHHHHHccCCCCCC
Confidence 9999999999999999999999997
No 10
>1kgd_A CASK, peripheral plasma membrane CASK; maguk, guanylate kinase like domain, protein binding; 1.31A {Homo sapiens} SCOP: c.37.1.1
Probab=99.89 E-value=4.3e-23 Score=187.39 Aligned_cols=172 Identities=34% Similarity=0.589 Sum_probs=136.6
Q ss_pred cccCCCcccccccccccccccccccccccccccCcccccCCCCCCCCCccCCCcceecCHHHHHHhhhcCCeeEEEEEcC
Q psy4417 165 AFVPPEADYVHKIGICGTRYIKQYNTLQYNSTLMSRSFPDTTRPMRELEENGQNYWFTSREVMERDIQDHKFLEYGEHNG 244 (440)
Q Consensus 165 ~~~~~~~~~~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~ttr~~r~~e~~g~~y~fvs~~~f~~~i~~~~fle~~~~~g 244 (440)
.+.+.||+|+||+|+++.+.......+. ..+++|||+|+++|.+|.+|+|++.++|..++..+.|++++++.+
T Consensus 7 ~i~i~GpsGsGKSTL~~~L~~~~~~~~~-------~~i~~ttr~~~~ge~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 79 (180)
T 1kgd_A 7 TLVLLGAHGVGRRHIKNTLITKHPDRFA-------YPIPHTTRPPKKDEENGKNYYFVSHDQMMQDISNNEYLEYGSHED 79 (180)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHCTTTEE-------CCCCEECSCC---CCBTTTBEECCHHHHHHHHHTTCEEEEEEETT
T ss_pred EEEEECCCCCCHHHHHHHHHhhCCccEE-------EeeeccCCCCCccccCCCeeEEeCHHHHHHHHHcCCceEEEEEcC
Confidence 4567899999999998876543222232 478999999999999999999999999999999999999999999
Q ss_pred CccccchhhHHHHHhcCCeEEeecCcchhhhhhhhhccccccccCCCceEEecCCCccceeecCCCcccchhhccCcccc
Q psy4417 245 HLYGTHLDSIREVILSGKICVLDCSPVGLFTFLLGLIEGTVTAKLIPYTYSIPICSWSSFFASDTTRPMRELEENGQNYW 324 (440)
Q Consensus 245 ~~yg~~~~~i~~v~~~g~~~il~~~~~g~~~l~~~l~~~~~~~~~~p~~i~i~~~~~~~f~~~~ttr~~~~~e~~g~~y~ 324 (440)
++||++.+++++++++|+.||++++++|+..+ +.....+.+| |+.|++ ...++.+
T Consensus 80 n~yg~~~~~i~~~l~~g~~vil~id~~g~~~~--------~~~~~~~~~i---------fi~~p~---~~~l~~R----- 134 (180)
T 1kgd_A 80 AMYGTKLETIRKIHEQGLIAILDVEPQALKVL--------RTAEFAPFVV---------FIAAPT---ITPGLNE----- 134 (180)
T ss_dssp EEEEEEHHHHHHHHHTTCEEEEECCGGGHHHH--------SSTTTCEEEE---------EEECCS---CCTTSCC-----
T ss_pred ccccccHHHHHHHHHCCCeEEEEECHHHHHHH--------HHhCCCcEEE---------EEECCC---HHHHHhh-----
Confidence 99999999999999999999999999999988 3222333444 999988 6555532
Q ss_pred ccCHHHHHHHHHcCceeeEEEEcCccccccHHHHHHHHhcCCeeEecCCCcHHHHHHHHHHH-HHHHHHhcCCccEEEEc
Q psy4417 325 FTSREVMERDIQDHKFLEYGEHNGHLYGTHLDSIREVILSGKICVLDCSPVEEDIKRTLEES-ACLQRSYERFIDKVIVN 403 (440)
Q Consensus 325 f~s~~~f~~~~~~~~fle~~~~~~~~yGt~~~~i~~~~~~~~~~i~~~~~s~e~l~~~l~~~-~~~e~~~~~~fd~vi~N 403 (440)
+++++ |+.++ ..++..+.+.||++|+|
T Consensus 135 ---------------------------------------------------~~~i~-r~~~~~~~~~~~~~~~~d~~i~n 162 (180)
T 1kgd_A 135 ---------------------------------------------------DESLQ-RLQKESDILQRTYAHYFDLTIIN 162 (180)
T ss_dssp ---------------------------------------------------SHHHH-HHHHHHHHHHHHHGGGCSEEEEC
T ss_pred ---------------------------------------------------HHHHH-HHHHHHHHHHHhhhCCCcEEEEC
Confidence 23453 44443 45555678999999999
Q ss_pred CCHHHHHHHHHHHHHhc
Q psy4417 404 EDFDETFRTVIELLDTL 420 (440)
Q Consensus 404 ddl~~a~~~l~~~i~~~ 420 (440)
||+++|+++|.++|..+
T Consensus 163 ~~~~~~~~~l~~~i~~~ 179 (180)
T 1kgd_A 163 NEIDETIRHLEEAVELV 179 (180)
T ss_dssp SSHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHh
Confidence 99999999999999764
No 11
>3tau_A Guanylate kinase, GMP kinase; structural genomics, center for structural genomics of infec diseases, csgid, putative guanylate kinase; HET: MSE; 2.05A {Listeria monocytogenes}
Probab=99.88 E-value=8.3e-23 Score=189.86 Aligned_cols=183 Identities=25% Similarity=0.297 Sum_probs=145.4
Q ss_pred hcccCCCcccccccccccccccccccccccccccCcccccCCCCCCCCCccCCCcceecCHHHHHHhhhcCCeeEEEEEc
Q psy4417 164 KAFVPPEADYVHKIGICGTRYIKQYNTLQYNSTLMSRSFPDTTRPMRELEENGQNYWFTSREVMERDIQDHKFLEYGEHN 243 (440)
Q Consensus 164 ~~~~~~~~~~~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~ttr~~r~~e~~g~~y~fvs~~~f~~~i~~~~fle~~~~~ 243 (440)
..+.+.||+|+||++++..+.......+. ..+++|||+|+++|.+|.+|+|++.++|+.++..+.|++++++.
T Consensus 9 ~~i~l~GpsGsGKsTl~~~L~~~~~~~~~-------~~~~~~tr~~~~~e~~g~~y~~~~~~~f~~~~~~~~~le~~~~~ 81 (208)
T 3tau_A 9 LLIVLSGPSGVGKGTVREAVFKDPETSFD-------YSISMTTRLPREGEQDGVDYYFRSREVFEQAIKDGKMLEYAEYV 81 (208)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHSTTCCCE-------ECCCEESSCCCTTCCBTTTBEECCHHHHHHHHHTTCEEEEEEET
T ss_pred cEEEEECcCCCCHHHHHHHHHhhCCCcEE-------EEEecccccCcCcccCCceeEEecHHHHHHHHhcCcEEEEEEEc
Confidence 35667899999999998877654333344 48999999999999999999999999999999999999999999
Q ss_pred CCccccchhhHHHHHhcCCeEEeecCcchhhhhhhhhccccccccCCCceEEecCCCccceeecCCCcccchhhccCccc
Q psy4417 244 GHLYGTHLDSIREVILSGKICVLDCSPVGLFTFLLGLIEGTVTAKLIPYTYSIPICSWSSFFASDTTRPMRELEENGQNY 323 (440)
Q Consensus 244 g~~yg~~~~~i~~v~~~g~~~il~~~~~g~~~l~~~l~~~~~~~~~~p~~i~i~~~~~~~f~~~~ttr~~~~~e~~g~~y 323 (440)
|++||++.+.+++++++|++||++++++|...+ +.....+.+| |+.|++ ...++.+-.
T Consensus 82 ~~~yg~~~~~i~~~l~~g~~vild~~~~g~~~~--------~~~~~~~~~i---------~i~~ps---~~~l~~Rl~-- 139 (208)
T 3tau_A 82 GNYYGTPLEYVEEKLAAGVDIFLEIEVQGAMQV--------RKAMPEGIFI---------FLTPPD---LSELKNRII-- 139 (208)
T ss_dssp TEEEEEEHHHHHHHHHTTCCEEEECCHHHHHHH--------HHHCTTSEEE---------EEECTT---TTTSSCC----
T ss_pred cccCCCcHHHHHHHHHcCCeEEEEeeHHHHHHH--------HHhCCCeEEE---------EEeCCC---HHHHHHHHH--
Confidence 999999999999999999999999999999887 2222334555 888876 333332200
Q ss_pred cccCHHHHHHHHHcCceeeEEEEcCccccccHHHHHHHHhcCCeeEecCCCcHHHHHHHHHHHHHHHHHhcCCccEEEEc
Q psy4417 324 WFTSREVMERDIQDHKFLEYGEHNGHLYGTHLDSIREVILSGKICVLDCSPVEEDIKRTLEESACLQRSYERFIDKVIVN 403 (440)
Q Consensus 324 ~f~s~~~f~~~~~~~~fle~~~~~~~~yGt~~~~i~~~~~~~~~~i~~~~~s~e~l~~~l~~~~~~e~~~~~~fd~vi~N 403 (440)
.+|+ .+.+++++|++.+. .+..+.+.||++|+|
T Consensus 140 --------------------------~R~~--------------------~~~e~i~~Rl~~~~-~e~~~~~~~d~vivN 172 (208)
T 3tau_A 140 --------------------------GRGT--------------------ESMEVVEERMETAK-KEIEMMASYDYAVVN 172 (208)
T ss_dssp ---------------------------------------------------CCHHHHHHHHHHH-HHHHHGGGSSEEEEC
T ss_pred --------------------------hcCC--------------------CCHHHHHHHHHHHH-HHHHhhccCCEEEEC
Confidence 1111 25688999998754 455677889999999
Q ss_pred CCHHHHHHHHHHHHHhccC
Q psy4417 404 EDFDETFRTVIELLDTLSN 422 (440)
Q Consensus 404 ddl~~a~~~l~~~i~~~~~ 422 (440)
||+++++++|..+|.....
T Consensus 173 ~~~~~~~~~l~~~i~~~~~ 191 (208)
T 3tau_A 173 DVVANAVQKIKGIVETEHL 191 (208)
T ss_dssp SSHHHHHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHHHHHH
Confidence 9999999999999976543
No 12
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=99.88 E-value=9.8e-21 Score=206.52 Aligned_cols=97 Identities=40% Similarity=0.581 Sum_probs=81.8
Q ss_pred cCCeEEeecCcchhhhhhhhhccccccccCCCceEEecCCCccceeecCCCcccchhhccCcccccc-CHHHHHHHHHcC
Q psy4417 260 SGKICVLDCSPVGLFTFLLGLIEGTVTAKLIPYTYSIPICSWSSFFASDTTRPMRELEENGQNYWFT-SREVMERDIQDH 338 (440)
Q Consensus 260 ~g~~~il~~~~~g~~~l~~~l~~~~~~~~~~p~~i~i~~~~~~~f~~~~ttr~~~~~e~~g~~y~f~-s~~~f~~~~~~~ 338 (440)
.++.+|| ++| +..+|++.|++... ..+. |.+++|||++|++|++|+||||+ |+++|++++++|
T Consensus 530 ~~r~vvl-~GP-~K~tl~~~L~~~~~-----~~~~---------~~vs~TTR~~r~gE~~G~dY~Fv~s~~~f~~~i~~~ 593 (721)
T 2xkx_A 530 YARPIII-LGP-TKDRANDDLLSEFP-----DKFG---------SCVPHTTRPKREYEIDGRDYHFVSSREKMEKDIRAH 593 (721)
T ss_pred CCCEEEE-ECC-CHHHHHHHHHHhCc-----ccee---------ecccccccCCCCCccCCceeEEecCHHHHHHHHhcC
Confidence 4566555 566 46667777775432 1233 77899999999999999999999 999999999999
Q ss_pred ceeeEEEEcCccccccHHHHHHHHhcCCeeEecC
Q psy4417 339 KFLEYGEHNGHLYGTHLDSIREVILSGKICVLDC 372 (440)
Q Consensus 339 ~fle~~~~~~~~yGt~~~~i~~~~~~~~~~i~~~ 372 (440)
+||||++++||+|||++++|++++++|+.|+|++
T Consensus 594 ~flE~~~~~g~~YGt~~~~v~~~~~~g~~~ildi 627 (721)
T 2xkx_A 594 KFIEAGQYNSHLYGTSVQSVREVAEQGKHCILDV 627 (721)
T ss_pred CceEEEEECCccceeeHHHHHHHHHCCCcEEEeC
Confidence 9999999999999999999999999999987764
No 13
>3a00_A Guanylate kinase, GMP kinase; domain movement, dimerization, acetylation, ATP-binding, nucleotide-binding, phosphoprotein, transferase; 1.80A {Saccharomyces cerevisiae} PDB: 1ex6_A* 1ex7_A 1gky_A* 2zzz_A 3sqk_A 4f4j_A 2zzy_A
Probab=99.87 E-value=1.6e-22 Score=184.49 Aligned_cols=179 Identities=26% Similarity=0.414 Sum_probs=128.1
Q ss_pred ccCCCcccccccccccccccccccccccccccCcccccCCCCCCCCCccCCCcceecCHHHHHHhhhcCCeeEEEEEcCC
Q psy4417 166 FVPPEADYVHKIGICGTRYIKQYNTLQYNSTLMSRSFPDTTRPMRELEENGQNYWFTSREVMERDIQDHKFLEYGEHNGH 245 (440)
Q Consensus 166 ~~~~~~~~~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~ttr~~r~~e~~g~~y~fvs~~~f~~~i~~~~fle~~~~~g~ 245 (440)
+.+.||+|+||+|+++.+.......+. .++++|||+|+++|++|.+|+|++.+.|..++..+.|+++.++.++
T Consensus 4 i~l~GpsGaGKsTl~~~L~~~~~~~~~-------~~~~~~tr~~~~ge~~g~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 76 (186)
T 3a00_A 4 IVISGPSGTGKSTLLKKLFAEYPDSFG-------FSVSSTTRTPRAGEVNGKDYNFVSVDEFKSMIKNNEFIEWAQFSGN 76 (186)
T ss_dssp EEEESSSSSSHHHHHHHHHHHCGGGEE-------CCCEEECSCCCTTCCBTTTBEECCHHHHHHHHHTTCEEEEEEETTE
T ss_pred EEEECCCCCCHHHHHHHHHhhCCccce-------EEeeccccCCCCCccCCeeeeecCHHHHHHHHhhcceeeEEEEece
Confidence 456799999999988776544333343 4899999999999999999999999999999999999999999999
Q ss_pred ccccchhhHHHHHhcCCeEEeecCcchhhhhhhhhcccccc-ccCCCceEEecCCCccceeecCCCcccchhhccCcccc
Q psy4417 246 LYGTHLDSIREVILSGKICVLDCSPVGLFTFLLGLIEGTVT-AKLIPYTYSIPICSWSSFFASDTTRPMRELEENGQNYW 324 (440)
Q Consensus 246 ~yg~~~~~i~~v~~~g~~~il~~~~~g~~~l~~~l~~~~~~-~~~~p~~i~i~~~~~~~f~~~~ttr~~~~~e~~g~~y~ 324 (440)
+||++.+.++++++.|++|+++++++|.+.+ +. ..+.+.+| |+.||+ +..++.+-
T Consensus 77 ~yg~~~~~i~~~l~~g~~~il~~~~~g~~~l--------~~~~~~~~~~i---------~i~~p~---~~~l~~Rl---- 132 (186)
T 3a00_A 77 YYGSTVASVKQVSKSGKTCILDIDMQGVKSV--------KAIPELNARFL---------FIAPPS---VEDLKKRL---- 132 (186)
T ss_dssp EEEEEHHHHHHHHHTTCEEEEECCHHHHHHH--------HTCGGGCCEEE---------EEECSC---C-----------
T ss_pred eccCcHHHHHHHHHcCCeEEEEEcHHHHHHH--------HHhcCCCeEEE---------EEECcC---HHHHHHHH----
Confidence 9999999999999999999999999999988 33 34555555 998887 44443220
Q ss_pred ccCHHHHHHHHHcCceeeEEEEcCccccccHHHHHHHHhcCCeeEecCCCcHHHHHHHHHHHHH-HHHHhcCCccEEEEc
Q psy4417 325 FTSREVMERDIQDHKFLEYGEHNGHLYGTHLDSIREVILSGKICVLDCSPVEEDIKRTLEESAC-LQRSYERFIDKVIVN 403 (440)
Q Consensus 325 f~s~~~f~~~~~~~~fle~~~~~~~~yGt~~~~i~~~~~~~~~~i~~~~~s~e~l~~~l~~~~~-~e~~~~~~fd~vi~N 403 (440)
..+|+ .+.+++++|++.+.. ++..+.+.||++|+|
T Consensus 133 ------------------------~~Rg~--------------------~~~~~i~~rl~~~~~~~~~~~~~~~d~vi~n 168 (186)
T 3a00_A 133 ------------------------EGRGT--------------------ETEESINKRLSAAQAELAYAETGAHDKVIVN 168 (186)
T ss_dssp ----------------------------------------------------------------------CCCCSEEEEC
T ss_pred ------------------------HhcCC--------------------CCHHHHHHHHHHHHHHHHhhcccCCcEEEEC
Confidence 01121 256788888887542 222234899999999
Q ss_pred CCHHHHHHHHHHHHHh
Q psy4417 404 EDFDETFRTVIELLDT 419 (440)
Q Consensus 404 ddl~~a~~~l~~~i~~ 419 (440)
||+++|+++|.++|..
T Consensus 169 d~~~~a~~~l~~~i~~ 184 (186)
T 3a00_A 169 DDLDKAYKELKDFIFA 184 (186)
T ss_dssp SSHHHHHHHHHHHHTT
T ss_pred cCHHHHHHHHHHHHHh
Confidence 9999999999999964
No 14
>1s96_A Guanylate kinase, GMP kinase; E.coli, dimer, SAD, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.1 PDB: 2an9_A* 2anb_A* 2anc_A 2f3r_A* 2f3t_A*
Probab=99.85 E-value=4.2e-21 Score=180.05 Aligned_cols=184 Identities=23% Similarity=0.274 Sum_probs=146.9
Q ss_pred HhhhcccCCCccccccccccccccccccc-ccccccccCcccccCCCCCCCCCccCCCcceecCHHHHHHhhhcCCeeEE
Q psy4417 161 ERRKAFVPPEADYVHKIGICGTRYIKQYN-TLQYNSTLMSRSFPDTTRPMRELEENGQNYWFTSREVMERDIQDHKFLEY 239 (440)
Q Consensus 161 ~rr~~~~~~~~~~~gk~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ttr~~r~~e~~g~~y~fvs~~~f~~~i~~~~fle~ 239 (440)
+.-..+.+.||+|+||+|+++.+....+. .+. ..+++|||++|+++.+|..|+|.+.+.|+.++.++.|+|+
T Consensus 14 ~~G~ii~l~GpsGsGKSTLlk~L~g~~~p~~~~-------g~v~~ttr~~~~~e~~gi~y~fq~~~~f~~~~~~~~f~E~ 86 (219)
T 1s96_A 14 AQGTLYIVSAPSGAGKSSLIQALLKTQPLYDTQ-------VSVSHTTRQPRPGEVHGEHYFFVNHDEFKEMISRDAFLEH 86 (219)
T ss_dssp -CCCEEEEECCTTSCHHHHHHHHHHHSCTTTEE-------ECCCEECSCCCTTCCBTTTBEECCHHHHHHHHHTTCEEEE
T ss_pred CCCcEEEEECCCCCCHHHHHHHHhccCCCCceE-------EEEEecCCCCCcccccCceEEECCHHHHHHHHhcCHHHHH
Confidence 34456677899999999998876543221 233 4789999999999999999999999999999999999999
Q ss_pred EEEcCCccccchhhHHHHHhcCCeEEeecCcchhhhhhhhhccccccccCCCceEEecCCCccceeecCCCcccchhhcc
Q psy4417 240 GEHNGHLYGTHLDSIREVILSGKICVLDCSPVGLFTFLLGLIEGTVTAKLIPYTYSIPICSWSSFFASDTTRPMRELEEN 319 (440)
Q Consensus 240 ~~~~g~~yg~~~~~i~~v~~~g~~~il~~~~~g~~~l~~~l~~~~~~~~~~p~~i~i~~~~~~~f~~~~ttr~~~~~e~~ 319 (440)
.++.|++||++.+.|+++++.|++||||+++++...++..+. .+.+| |+.||. +...+.+
T Consensus 87 ~~~~~~~yg~~~~~v~~~l~~G~illLDLD~~~~~~i~~~l~--------~~~tI---------~i~th~---~~~l~~R 146 (219)
T 1s96_A 87 AEVFGNYYGTSREAIEQVLATGVDVFLDIDWQGAQQIRQKMP--------HARSI---------FILPPS---KIELDRR 146 (219)
T ss_dssp EEETTEEEEEEHHHHHHHHTTTCEEEEECCHHHHHHHHHHCT--------TCEEE---------EEECSS---HHHHHHH
T ss_pred HHHHhccCCCCHHHHHHHHhcCCeEEEEECHHHHHHHHHHcc--------CCEEE---------EEECCC---HHHHHHH
Confidence 999999999999999999999999999999999998843221 23444 889998 6555421
Q ss_pred CccccccCHHHHHHHHHcCceeeEEEEcCccccccHHHHHHHHhcCCeeEecCCCcHHHHHHHHHHHHHHHHHhcCCccE
Q psy4417 320 GQNYWFTSREVMERDIQDHKFLEYGEHNGHLYGTHLDSIREVILSGKICVLDCSPVEEDIKRTLEESACLQRSYERFIDK 399 (440)
Q Consensus 320 g~~y~f~s~~~f~~~~~~~~fle~~~~~~~~yGt~~~~i~~~~~~~~~~i~~~~~s~e~l~~~l~~~~~~e~~~~~~fd~ 399 (440)
+.. +|+ -+.+++.+|+..+. .|..+.+.||+
T Consensus 147 --------------l~~--------------rG~--------------------~~~e~i~~rl~~a~-~e~~~~~~~d~ 177 (219)
T 1s96_A 147 --------------LRG--------------RGQ--------------------DSEEVIAKRMAQAV-AEMSHYAEYDY 177 (219)
T ss_dssp --------------HHT--------------TSC--------------------SCHHHHHHHHHHHH-HHHTTGGGSSE
T ss_pred --------------HHH--------------cCC--------------------CCHHHHHHHHHHHH-HHHhhccCCCE
Confidence 111 121 26889999998753 46667789999
Q ss_pred EEEcCCHHHHHHHHHHHHHhc
Q psy4417 400 VIVNEDFDETFRTVIELLDTL 420 (440)
Q Consensus 400 vi~Nddl~~a~~~l~~~i~~~ 420 (440)
+|+|||+++|+++|.++|...
T Consensus 178 ~i~Nd~l~~a~~~l~~ii~~~ 198 (219)
T 1s96_A 178 LIVNDDFDTALTDLKTIIRAE 198 (219)
T ss_dssp EEECSSHHHHHHHHHHHHHHH
T ss_pred EEECcCHHHHHHHHHHHHHHH
Confidence 999999999999999999754
No 15
>2qor_A Guanylate kinase; phosphotransferase, purine metabolism, structural genomics, structural genomics of pathogenic protozoa consortium; HET: 5GP POP; 1.80A {Plasmodium vivax}
Probab=99.82 E-value=3.2e-20 Score=171.58 Aligned_cols=183 Identities=21% Similarity=0.264 Sum_probs=140.7
Q ss_pred hhcccCCCcccccccccccccccccccccccccccCcccccCCCCCCCCCccCCCcceecCHHHHHHhhhcCCeeEEEEE
Q psy4417 163 RKAFVPPEADYVHKIGICGTRYIKQYNTLQYNSTLMSRSFPDTTRPMRELEENGQNYWFTSREVMERDIQDHKFLEYGEH 242 (440)
Q Consensus 163 r~~~~~~~~~~~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~ttr~~r~~e~~g~~y~fvs~~~f~~~i~~~~fle~~~~ 242 (440)
-..+++.|++|+||+|++..+.......+. .+++||||+||++|.+|.+|+|++.++|..++.++.|++++++
T Consensus 12 ~~~i~l~G~sGsGKsTl~~~L~~~~~~~~~-------~~~~~ttR~~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (204)
T 2qor_A 12 IPPLVVCGPSGVGKGTLIKKVLSEFPSRFR-------FSISCTTRNKREKETNGVDYYFVDKDDFERKLKEGQFLEFDKY 84 (204)
T ss_dssp CCCEEEECCTTSCHHHHHHHHHHHCTTTEE-------ECCEEECSCCCTTCCBTTTEEECCHHHHHHHHHTTCEEEEEEE
T ss_pred CCEEEEECCCCCCHHHHHHHHHHhCcccee-------eeeeecCCCCCCCCCCCcceeeCCHHHHHHHHHcCCCEEeHHh
Confidence 345667899999999998876544322133 4789999999999999999999999999999999999999999
Q ss_pred cCCccccchhhHHHHHhcCCeEEeecCcchhhhhhhhhccccccccC---CCceEEecCCCccceeecCCCcccchhhcc
Q psy4417 243 NGHLYGTHLDSIREVILSGKICVLDCSPVGLFTFLLGLIEGTVTAKL---IPYTYSIPICSWSSFFASDTTRPMRELEEN 319 (440)
Q Consensus 243 ~g~~yg~~~~~i~~v~~~g~~~il~~~~~g~~~l~~~l~~~~~~~~~---~p~~i~i~~~~~~~f~~~~ttr~~~~~e~~ 319 (440)
.|+.||++.+.|++++++|+.||++++++|...+ + ..+ .+.+| |+.|++ ...+..+
T Consensus 85 ~~~~~~~~~~~i~~~l~~g~~vi~d~~~~~~~~l--------~-~~~~~~~~~~i---------~l~~~s---~e~l~~R 143 (204)
T 2qor_A 85 ANNFYGTLKSEYDLAVGEGKICLFEMNINGVKQL--------K-ESKHIQDGIYI---------FVKPPS---IDILLGR 143 (204)
T ss_dssp TTEEEEEEHHHHHHHHHTTCEEEEECCHHHHHHH--------H-HCSSCSCCEEE---------EEECSC---HHHHHHH
T ss_pred CCCeecCCHHHHHHHHHcCCeEEEEECHHHHHHH--------H-HhcCCCCeEEE---------EEcCCC---HHHHHHH
Confidence 9999999999999999999999999999999887 2 111 23455 887555 3333321
Q ss_pred CccccccCHHHHHHHHHcCceeeEEEEcCccccccHHHHHHHHhcCCeeEecCCCcHHHHHHHHHHHH-HHHHHhcCCcc
Q psy4417 320 GQNYWFTSREVMERDIQDHKFLEYGEHNGHLYGTHLDSIREVILSGKICVLDCSPVEEDIKRTLEESA-CLQRSYERFID 398 (440)
Q Consensus 320 g~~y~f~s~~~f~~~~~~~~fle~~~~~~~~yGt~~~~i~~~~~~~~~~i~~~~~s~e~l~~~l~~~~-~~e~~~~~~fd 398 (440)
+ ...+. .+.+++++|+..+. .+...|...||
T Consensus 144 --------------l---------------------------~~R~~-------~~~~~i~~rl~~~~~~~~~~~~~~~d 175 (204)
T 2qor_A 144 --------------L---------------------------KNRNT-------EKPEEINKRMQELTREMDEADKVGFN 175 (204)
T ss_dssp --------------H---------------------------HTCTT-------SCHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred --------------H---------------------------HHcCC-------CCHHHHHHHHHHHHHHHHHhhhccCc
Confidence 1 00111 14678888888753 22211677899
Q ss_pred EEEEcCCHHHHHHHHHHHHHhcc
Q psy4417 399 KVIVNEDFDETFRTVIELLDTLS 421 (440)
Q Consensus 399 ~vi~Nddl~~a~~~l~~~i~~~~ 421 (440)
++|+|+++++++++|.++|....
T Consensus 176 ~vi~n~~~e~~~~~i~~~i~~~~ 198 (204)
T 2qor_A 176 YFIVNDDLARTYAELREYLLGSY 198 (204)
T ss_dssp EEEECSSHHHHHHHHHHHHHHHC
T ss_pred EEEECcCHHHHHHHHHHHHHHHh
Confidence 99999999999999999998643
No 16
>1ex7_A Guanylate kinase; substrate-induced FIT, domain movement, GMP, ATP, substrate specificity, X-RAY diffraction, transferase; HET: 5GP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1ex6_A* 1gky_A* 3sqk_A 4f4j_A
Probab=99.82 E-value=2.5e-20 Score=170.21 Aligned_cols=110 Identities=34% Similarity=0.498 Sum_probs=93.3
Q ss_pred eEEeecCcchhhhhhhhhccccccccCCCceEEecCCCccceeecCCCcccchhhccCccccccCHHHHHHHHHcCceee
Q psy4417 263 ICVLDCSPVGLFTFLLGLIEGTVTAKLIPYTYSIPICSWSSFFASDTTRPMRELEENGQNYWFTSREVMERDIQDHKFLE 342 (440)
Q Consensus 263 ~~il~~~~~g~~~l~~~l~~~~~~~~~~p~~i~i~~~~~~~f~~~~ttr~~~~~e~~g~~y~f~s~~~f~~~~~~~~fle 342 (440)
++|...+..|..+|++.|++.... ... |++++|||++|++|++|+||||+|+++|++|+++|+|+|
T Consensus 4 IVi~GPSG~GK~Tl~~~L~~~~~~-----~~~---------~svs~TTR~pR~gE~~G~dY~Fvs~~eF~~~i~~g~flE 69 (186)
T 1ex7_A 4 IVISGPSGTGKSTLLKKLFAEYPD-----SFG---------FSVSSTTRTPRAGEVNGKDYNFVSVDEFKSMIKNNEFIE 69 (186)
T ss_dssp EEEECCTTSSHHHHHHHHHHHCTT-----TEE---------ECCCEECSCCCTTCCBTTTBEECCHHHHHHHHHTTCEEE
T ss_pred EEEECCCCCCHHHHHHHHHHhCCC-----CeE---------EEEEEeccCCCCCCcCCceeEeecHHHHHHHHHcCCEEE
Confidence 445555555678898888765321 233 788999999999999999999999999999999999999
Q ss_pred EEEEcCccccccHHHHHHHHhcCCeeEe----------------------cCCCcHHHHHHHHHHH
Q psy4417 343 YGEHNGHLYGTHLDSIREVILSGKICVL----------------------DCSPVEEDIKRTLEES 386 (440)
Q Consensus 343 ~~~~~~~~yGt~~~~i~~~~~~~~~~i~----------------------~~~~s~e~l~~~l~~~ 386 (440)
|++++|++|||+++.|+..+++|+.|++ +.|||.++|++||...
T Consensus 70 ~~~~~g~~YGt~~~~v~~~l~~g~~vil~id~~g~~~~k~~~~~~~~~Ifi~pps~e~L~~RL~~R 135 (186)
T 1ex7_A 70 WAQFSGNYYGSTVASVKQVSKSGKTCILDIDMQGVKSVKAIPELNARFLFIAPPSVEDLKKRLEGR 135 (186)
T ss_dssp EEEETTEEEEEEHHHHHHHHHHTSEEEEECCHHHHHHHHTCGGGCCEEEEEECSCHHHHHHHHHHH
T ss_pred EEEEcCceeeeecceeeehhhCCCEEEecCCHHHHHHHHHhcccCceEEEEeCCCHHHHHHHHHhc
Confidence 9999999999999999999999998655 4589999999999763
No 17
>1lvg_A Guanylate kinase, GMP kinase; transferase; HET: ADP 5GP; 2.10A {Mus musculus} SCOP: c.37.1.1
Probab=99.77 E-value=9.3e-19 Score=161.30 Aligned_cols=180 Identities=28% Similarity=0.463 Sum_probs=142.0
Q ss_pred cccCCCcccccccccccccccccccccccccccCcccccCCCCCCCCCccCCCcceecCHHHHHHhhhcCCeeEEEEEcC
Q psy4417 165 AFVPPEADYVHKIGICGTRYIKQYNTLQYNSTLMSRSFPDTTRPMRELEENGQNYWFTSREVMERDIQDHKFLEYGEHNG 244 (440)
Q Consensus 165 ~~~~~~~~~~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~ttr~~r~~e~~g~~y~fvs~~~f~~~i~~~~fle~~~~~g 244 (440)
.+.+.||+|+||+|+++.+.......+. ..+++|||+|+.|+.+|.+|+|++.++|.+++..+.|++++++.+
T Consensus 6 ~i~lvGpsGaGKSTLl~~L~~~~~~~~~-------~~v~~ttr~~~~g~~~g~~~~~~~~~~~~~~i~~~~~l~~~~~~~ 78 (198)
T 1lvg_A 6 PVVLSGPSGAGKSTLLKKLFQEHSSIFG-------FSVSHTTRNPRPGEEDGKDYYFVTREMMQRDIAAGDFIEHAEFSG 78 (198)
T ss_dssp CEEEECCTTSSHHHHHHHHHHHHTTTEE-------ECCCEECSCCCTTCCBTTTBEECCHHHHHHHHHHTCEEEEEEETT
T ss_pred EEEEECCCCCCHHHHHHHHHhhCchhce-------eeeeeeccCCCCcccCCceEEEccHHHHHHHHHcCCCEeeeeecC
Confidence 4567799999999988766543222233 488999999999999999999999999999999999999999999
Q ss_pred CccccchhhHHHHHhcCCeEEeecCcchhhhhhhhhccccccccCCCceEEecCCCccceeecCCCcccchhhccCcccc
Q psy4417 245 HLYGTHLDSIREVILSGKICVLDCSPVGLFTFLLGLIEGTVTAKLIPYTYSIPICSWSSFFASDTTRPMRELEENGQNYW 324 (440)
Q Consensus 245 ~~yg~~~~~i~~v~~~g~~~il~~~~~g~~~l~~~l~~~~~~~~~~p~~i~i~~~~~~~f~~~~ttr~~~~~e~~g~~y~ 324 (440)
++||++.+.++++++.|+.|++++++.|...+ ....+.|..+ |+.+|+ ...+...
T Consensus 79 n~~g~~~~~i~~~~~~~~~~~~~~~~~g~~~~--------~~~~~~~~~~---------~l~~p~---~~ilde~----- 133 (198)
T 1lvg_A 79 NLYGTSKEAVRAVQAMNRICVLDVDLQGVRSI--------KKTDLCPIYI---------FVQPPS---LDVLEQR----- 133 (198)
T ss_dssp EEEEEEHHHHHHHHHTTCEEEEECCHHHHHHH--------TTSSCCCEEE---------EEECSC---HHHHHHH-----
T ss_pred ccCCCCHHHHHHHHHcCCcEEEECCHHHHHHH--------HhcCCCcEEE---------EEeCCC---HHHHHHH-----
Confidence 99999999999999999999999999998877 2234567767 888877 4433211
Q ss_pred ccCHHHHHHHHHcCceeeEEEEcCccccccHHHHHHHHhcCCeeEecCCCcHHHHHHHHHHHHHHHHHhc---CCccEEE
Q psy4417 325 FTSREVMERDIQDHKFLEYGEHNGHLYGTHLDSIREVILSGKICVLDCSPVEEDIKRTLEESACLQRSYE---RFIDKVI 401 (440)
Q Consensus 325 f~s~~~f~~~~~~~~fle~~~~~~~~yGt~~~~i~~~~~~~~~~i~~~~~s~e~l~~~l~~~~~~e~~~~---~~fd~vi 401 (440)
....+ ..+++++++++..... +.... ..||++|
T Consensus 134 ------------------------------------~~~~d-------~~~e~~i~~~l~~~~~-~~~~a~~~~~~D~ii 169 (198)
T 1lvg_A 134 ------------------------------------LRLRN-------TETEESLAKRLAAART-DMESSKEPGLFDLVI 169 (198)
T ss_dssp ------------------------------------HHHHT-------CSCHHHHHHHHHHHHH-HTTGGGSTTTCSEEE
T ss_pred ------------------------------------HHhcC-------CCCHHHHHHHHHHHHH-HHHHhhccCCceEEE
Confidence 00001 2368889999887543 23333 7899999
Q ss_pred EcCCHHHHHHHHHHHHHhc
Q psy4417 402 VNEDFDETFRTVIELLDTL 420 (440)
Q Consensus 402 ~Nddl~~a~~~l~~~i~~~ 420 (440)
+|+|+++|+++|.++|...
T Consensus 170 vnd~le~a~~~l~~ii~~~ 188 (198)
T 1lvg_A 170 INDDLDKAYATLKQALSEE 188 (198)
T ss_dssp ECSSHHHHHHHHHHHTHHH
T ss_pred ECCCHHHHHHHHHHHHHHH
Confidence 9999999999999999753
No 18
>3tvt_A Disks large 1 tumor suppressor protein; DLG, SRC-homology-3, guanylate kinase, phosphorylation-depen cell membrane; 1.60A {Drosophila melanogaster} PDB: 3uat_A*
Probab=99.74 E-value=1.7e-18 Score=168.68 Aligned_cols=109 Identities=37% Similarity=0.496 Sum_probs=90.7
Q ss_pred cCCeEEeecCcchhhhhhhhhccccccccCCCceEEecCCCccceeecCCCcccchhhccCcccccc-CHHHHHHHHHcC
Q psy4417 260 SGKICVLDCSPVGLFTFLLGLIEGTVTAKLIPYTYSIPICSWSSFFASDTTRPMRELEENGQNYWFT-SREVMERDIQDH 338 (440)
Q Consensus 260 ~g~~~il~~~~~g~~~l~~~l~~~~~~~~~~p~~i~i~~~~~~~f~~~~ttr~~~~~e~~g~~y~f~-s~~~f~~~~~~~ 338 (440)
..+++|| ++| |..+|++.|++.++. .+. +.+|+|||++|++|++|+||||| ++++|++++++|
T Consensus 99 ~~RpvVl-~Gp-~K~tl~~~Ll~~~p~-----~f~---------~sVs~TTR~pR~gE~dG~dY~Fv~s~e~fe~~i~~~ 162 (292)
T 3tvt_A 99 YTRPVII-LGP-LKDRINDDLISEYPD-----KFG---------SCVPHTTRPKREYEVDGRDYHFVSSREQMERDIQNH 162 (292)
T ss_dssp SCCCEEE-EST-THHHHHHHHHHHCTT-----TEE---------CCCCEECSCCCTTCCBTTTBEECSCHHHHHHHHHTT
T ss_pred CCCeEEE-eCC-CHHHHHHHHHHhChh-----hcc---------ccccCCccCCcCCccCCccccccCCHHHHHHHHhcC
Confidence 3455555 456 477788888866431 122 77899999999999999999999 899999999999
Q ss_pred ceeeEEEEcCccccccHHHHHHHHhcCCeeEec---------------------CCCcHHHHHHHHH
Q psy4417 339 KFLEYGEHNGHLYGTHLDSIREVILSGKICVLD---------------------CSPVEEDIKRTLE 384 (440)
Q Consensus 339 ~fle~~~~~~~~yGt~~~~i~~~~~~~~~~i~~---------------------~~~s~e~l~~~l~ 384 (440)
+||||++++||+|||++++|++++++|+.|+|+ .|||.++|++|+.
T Consensus 163 ~flE~a~~~gn~YGT~~~~V~~~~~~gk~viLdid~qg~~~lk~~~~~pi~IFI~PpS~e~L~~r~~ 229 (292)
T 3tvt_A 163 LFIEAGQYNDNLYGTSVASVREVAEKGKHCILDVSGNAIKRLQVAQLYPVAVFIKPKSVDSVMEMNR 229 (292)
T ss_dssp CEEEEEEETTEEEEEEHHHHHHHHHHTCEEEECCCTHHHHHHHHTTCCCEEEEECCSCHHHHHHTCT
T ss_pred ceEEEEEEccceeEEehHHHHHHHHcCCcEEEeccchhhhhcccccccceEEEEECCCHHHHHHHHh
Confidence 999999999999999999999999999997664 4778888877664
No 19
>1kjw_A Postsynaptic density protein 95; protein-protein interaction, scaffold, neuropeptide; 1.80A {Rattus norvegicus} SCOP: b.34.2.1 c.37.1.1 PDB: 1jxm_A* 1jxo_A
Probab=99.71 E-value=1.4e-17 Score=162.76 Aligned_cols=97 Identities=41% Similarity=0.585 Sum_probs=83.2
Q ss_pred cCCeEEeecCcchhhhhhhhhccccccccCCCceEEecCCCccceeecCCCcccchhhccCcccccc-CHHHHHHHHHcC
Q psy4417 260 SGKICVLDCSPVGLFTFLLGLIEGTVTAKLIPYTYSIPICSWSSFFASDTTRPMRELEENGQNYWFT-SREVMERDIQDH 338 (440)
Q Consensus 260 ~g~~~il~~~~~g~~~l~~~l~~~~~~~~~~p~~i~i~~~~~~~f~~~~ttr~~~~~e~~g~~y~f~-s~~~f~~~~~~~ 338 (440)
.|+++|| ++| |..+|++.|++... ..+. |.+++|||++|++|++|++|||+ |+++|++++++|
T Consensus 104 ~~r~ivl-~GP-gK~tl~~~L~~~~~-----~~~~---------~~vs~TTR~~R~gE~~G~dY~Fv~s~eef~~~i~~g 167 (295)
T 1kjw_A 104 YARPIII-LGP-TKDRANDDLLSEFP-----DKFG---------SCVPHTTRPKREYEIDGRDYHFVSSREKMEKDIQAH 167 (295)
T ss_dssp SCCCEEE-EST-THHHHHHHHHHHCT-----TTEE---------CCCCEECSCCCTTCCBTTTBEECSCHHHHHHHHHTT
T ss_pred CCCEEEE-ECC-CHHHHHHHHHhhCc-----ccee---------eeeeecccCCCCccccCceeEecCCHHHHHHHHHCC
Confidence 4666665 566 77778888875432 2343 77899999999999999999999 999999999999
Q ss_pred ceeeEEEEcCccccccHHHHHHHHhcCCeeEecC
Q psy4417 339 KFLEYGEHNGHLYGTHLDSIREVILSGKICVLDC 372 (440)
Q Consensus 339 ~fle~~~~~~~~yGt~~~~i~~~~~~~~~~i~~~ 372 (440)
+||||++++||+|||+.++|++++++|+.|+|+.
T Consensus 168 ~flE~~~~~g~~YGt~~~~V~~~~~~G~~vildi 201 (295)
T 1kjw_A 168 KFIEAGQYNSHLYGTSVQSVREVAEQGKHCILDV 201 (295)
T ss_dssp CEEEEEEETTEEEEEEHHHHHHHHHTTCEEEECC
T ss_pred CcEEEEEEcCcEeeeeHHHHHHHHhcCCeEEEEe
Confidence 9999999999999999999999999999987654
No 20
>3lnc_A Guanylate kinase, GMP kinase; ALS collaborative crystallography, emerald biostructures, ATP-binding, cytoplasm, nucleotide-binding; HET: 5GP; 1.95A {Anaplasma phagocytophilum}
Probab=99.59 E-value=3.2e-15 Score=140.41 Aligned_cols=182 Identities=25% Similarity=0.300 Sum_probs=128.8
Q ss_pred cccCCCcccccccccccccc-cccccccccccccCcccccCCCCCCCCCccCCCcceecCHHHHHHhhhcCCeeEEEEEc
Q psy4417 165 AFVPPEADYVHKIGICGTRY-IKQYNTLQYNSTLMSRSFPDTTRPMRELEENGQNYWFTSREVMERDIQDHKFLEYGEHN 243 (440)
Q Consensus 165 ~~~~~~~~~~gk~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ttr~~r~~e~~g~~y~fvs~~~f~~~i~~~~fle~~~~~ 243 (440)
.+.+.||+|+||+|+++.+. ... ..+. ..+++|||+|+.++.+|.+|+|.+.+.|..+...+.|+++.++.
T Consensus 29 ii~l~Gp~GsGKSTl~~~L~~~~~-~~~~-------~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (231)
T 3lnc_A 29 ILVLSSPSGCGKTTVANKLLEKQK-NNIV-------KSVSVTTRAARKGEKEGKDYYFVDREEFLRLCSNGEIIEHAEVF 100 (231)
T ss_dssp EEEEECSCC----CHHHHHHC-----CEE-------ECCCEESSCCCTTCCBTTTBEECCHHHHHHHHHTTCEEEEEEET
T ss_pred EEEEECCCCCCHHHHHHHHHhcCC-CCcc-------cccccCCCCCCccccCCCeEEEecHHHhhhhhhcCceehhhhhc
Confidence 44567999999999887665 432 2232 47899999999999999999999999999999999999999999
Q ss_pred CCccccchhhHHHHHhcCCeEEeecCcchhhhhhhhhccccccccCCCceEEecCCCccceeecCCCcccchhhccCccc
Q psy4417 244 GHLYGTHLDSIREVILSGKICVLDCSPVGLFTFLLGLIEGTVTAKLIPYTYSIPICSWSSFFASDTTRPMRELEENGQNY 323 (440)
Q Consensus 244 g~~yg~~~~~i~~v~~~g~~~il~~~~~g~~~l~~~l~~~~~~~~~~p~~i~i~~~~~~~f~~~~ttr~~~~~e~~g~~y 323 (440)
++.||++.+.++++++.|+.|++++++.|...+. ..+.+....| |+.++. ...+..+-.
T Consensus 101 ~~~~~~~~~~i~~~~~~~~~vild~~~~g~~~~~---------~~~~~~~~~v-------~v~~~~---~~~l~~Rl~-- 159 (231)
T 3lnc_A 101 GNFYGVPRKNLEDNVDKGVSTLLVIDWQGAFKFM---------EMMREHVVSI-------FIMPPS---MEELRRRLC-- 159 (231)
T ss_dssp TEEEEEECTTHHHHHHHTCEEEEECCHHHHHHHH---------HHSGGGEEEE-------EEECSC---HHHHHHC----
T ss_pred cccCCCCHHHHHHHHHcCCeEEEEcCHHHHHHHH---------HhcCCCeEEE-------EEECCc---HHHHHHHHH--
Confidence 9999999999999999999999999999988772 2232434434 777776 433332100
Q ss_pred cccCHHHHHHHHHcCceeeEEEEcCccccccHHHHHHHHhcCCeeEecCCCcHHHHHHHHHHHHHHHHHhcCCccEEEEc
Q psy4417 324 WFTSREVMERDIQDHKFLEYGEHNGHLYGTHLDSIREVILSGKICVLDCSPVEEDIKRTLEESACLQRSYERFIDKVIVN 403 (440)
Q Consensus 324 ~f~s~~~f~~~~~~~~fle~~~~~~~~yGt~~~~i~~~~~~~~~~i~~~~~s~e~l~~~l~~~~~~e~~~~~~fd~vi~N 403 (440)
.+| ..+.++++++++.... +..+...+|+||+|
T Consensus 160 --------------------------~R~--------------------~~~~~~i~~rl~~~~~-~~~~~~~~d~vI~n 192 (231)
T 3lnc_A 160 --------------------------GRR--------------------ADDSEVVEARLKGAAF-EISHCEAYDYVIVN 192 (231)
T ss_dssp ----------------------------------------------------------CHHHHHH-HHTTGGGSSEEEEC
T ss_pred --------------------------HcC--------------------CCCHHHHHHHHHHHHH-HHhhhcCCeEEEEC
Confidence 000 1256778888876433 34456789999999
Q ss_pred CCHHHHHHHHHHHHHhccC
Q psy4417 404 EDFDETFRTVIELLDTLSN 422 (440)
Q Consensus 404 ddl~~a~~~l~~~i~~~~~ 422 (440)
+|+++++++|..+|.....
T Consensus 193 ~~~e~~~~~l~~~i~~~~~ 211 (231)
T 3lnc_A 193 EDIEETADRISNILRAEQM 211 (231)
T ss_dssp SSHHHHHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHHHHhh
Confidence 9999999999999986543
No 21
>3tr0_A Guanylate kinase, GMP kinase; purines, pyrimidines, nucleosides, nucleotides, transferase; HET: 5GP; 1.85A {Coxiella burnetii}
Probab=99.54 E-value=2.1e-14 Score=131.62 Aligned_cols=179 Identities=18% Similarity=0.258 Sum_probs=136.6
Q ss_pred cccCCCcccccccccccccccccccccccccccCcccccCCCCCCCCCccCCCcceecCHHHHHHhhhcCCeeEEEEEcC
Q psy4417 165 AFVPPEADYVHKIGICGTRYIKQYNTLQYNSTLMSRSFPDTTRPMRELEENGQNYWFTSREVMERDIQDHKFLEYGEHNG 244 (440)
Q Consensus 165 ~~~~~~~~~~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~ttr~~r~~e~~g~~y~fvs~~~f~~~i~~~~fle~~~~~g 244 (440)
.+.+.||+|+||+|+++.+.... ..+. ....+++|.++.++..|..|.|.+...|..+...+.|+++..+.+
T Consensus 9 ii~l~Gp~GsGKSTl~~~L~~~~-~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (205)
T 3tr0_A 9 LFIISAPSGAGKTSLVRALVKAL-AEIK-------ISISHTTRPKRPGDQEGVDYFFIDETRFQAMVKEGAFLEHATIYE 80 (205)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHS-SSEE-------ECCCEECSCCCTTCCBTTTBEECCHHHHHHHHHHTCEEEEEEETT
T ss_pred EEEEECcCCCCHHHHHHHHHhhC-CCeE-------EeceeccCCCchhHhcCceEEeccHHHHHHHHhcCcEEeeeeeec
Confidence 45567999999999887654432 2333 367889999999999999999999999999999999999999999
Q ss_pred CccccchhhHHHHHhcCCeEEeecCcchhhhhhhhhccccccccCCCceEEecCCCccceeecCCCcccchhhccCcccc
Q psy4417 245 HLYGTHLDSIREVILSGKICVLDCSPVGLFTFLLGLIEGTVTAKLIPYTYSIPICSWSSFFASDTTRPMRELEENGQNYW 324 (440)
Q Consensus 245 ~~yg~~~~~i~~v~~~g~~~il~~~~~g~~~l~~~l~~~~~~~~~~p~~i~i~~~~~~~f~~~~ttr~~~~~e~~g~~y~ 324 (440)
+.||++.+.+++.++.|+.|++++++.|...+ ......+.+| |+.+++ ......+
T Consensus 81 ~~~~~~~~~i~~~l~~g~~vi~d~~~~~~~~~--------~~~~~~~~~v---------~~~~~~---~e~l~~R----- 135 (205)
T 3tr0_A 81 RHYGTEKDWVLRQLKAGRDVLLEIDWQGARQI--------RELFPPALSI---------FILPPS---IEALRER----- 135 (205)
T ss_dssp EEEEEEHHHHHHHHHTTCEEEEECCHHHHHHH--------HHHCTTCEEE---------EEECSC---HHHHHHH-----
T ss_pred ccccchHHHHHHHHHcCCeEEEEECHHHHHHH--------HHhCCCcEEE---------EEECcC---HHHHHHH-----
Confidence 99999999999999999999999999998877 2122233445 777765 3322211
Q ss_pred ccCHHHHHHHHHcCceeeEEEEcCccccccHHHHHHHHhcCCeeEecCCCcHHHHHHHHHHHHHHHHHhcCCccEEEEcC
Q psy4417 325 FTSREVMERDIQDHKFLEYGEHNGHLYGTHLDSIREVILSGKICVLDCSPVEEDIKRTLEESACLQRSYERFIDKVIVNE 404 (440)
Q Consensus 325 f~s~~~f~~~~~~~~fle~~~~~~~~yGt~~~~i~~~~~~~~~~i~~~~~s~e~l~~~l~~~~~~e~~~~~~fd~vi~Nd 404 (440)
+ ...+. .+.+++++|++... .+..+...+|++|+|+
T Consensus 136 ---------l---------------------------~~R~~-------~~~~~i~~rl~~~~-~~~~~~~~~d~vi~n~ 171 (205)
T 3tr0_A 136 ---------L---------------------------IKRRQ-------DDTAIIEQRLALAR-EEMAHYKEFDYLVVND 171 (205)
T ss_dssp ---------H---------------------------HTCTT-------SCSSTHHHHHHHHH-HHHTTGGGCSEEEECS
T ss_pred ---------H---------------------------HHhCC-------CCHHHHHHHHHHHH-HHHhcccCCCEEEECC
Confidence 1 11111 24567788888753 3445667899999999
Q ss_pred CHHHHHHHHHHHHHhc
Q psy4417 405 DFDETFRTVIELLDTL 420 (440)
Q Consensus 405 dl~~a~~~l~~~i~~~ 420 (440)
|+++++++|.++|...
T Consensus 172 ~~~~~~~~l~~~i~~~ 187 (205)
T 3tr0_A 172 NFDQAVQNLIHIISAE 187 (205)
T ss_dssp SHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHH
Confidence 9999999999999753
No 22
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=99.52 E-value=3.9e-14 Score=114.02 Aligned_cols=82 Identities=23% Similarity=0.280 Sum_probs=72.7
Q ss_pred CCCCeEEEEeeCCCCccEEEEecCCCcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcC--Cce
Q psy4417 4 PPHPLKKILGTGLSPCGLTVEQDANGNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSD--GNI 79 (440)
Q Consensus 4 ~~~~r~v~l~r~g~~lGiti~~~~~~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~--~~v 79 (440)
.++++.|.+.|..++|||+|.++..+.+||++|.+||+|+++|.|++||+|++|||+++ ++|.|++++|++.. .++
T Consensus 3 ~g~~k~V~l~K~~~~LG~tI~~~g~g~~~I~rI~~gg~a~r~g~L~vGD~I~~VNG~~v~g~~h~evv~lLk~~~~g~~~ 82 (95)
T 3gge_A 3 KGIEKEVNVYKSEDSLGLTITDNGVGYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAKKLKELKKEELF 82 (95)
T ss_dssp CEEEEEEEEECCSSCCCEEEECSSSSCCEEEEECTTSHHHHCTTCCTTCEEEEETTEECTTCCHHHHHHHHHHSCTTCEE
T ss_pred CCeEEEEEEEECCCCceEEEEcCCCCcEEEEEEcCCChHHhcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhCCCCCEE
Confidence 35678899999999999999976557799999999999999999999999999999999 89999999999864 466
Q ss_pred eeeecc
Q psy4417 80 QFTIAP 85 (440)
Q Consensus 80 ~l~v~p 85 (440)
+|++.+
T Consensus 83 ~L~lv~ 88 (95)
T 3gge_A 83 TMKLIE 88 (95)
T ss_dssp EEEEEE
T ss_pred EEEEEC
Confidence 777654
No 23
>3ney_A 55 kDa erythrocyte membrane protein; structural genomics consortium, SGC, 55 kDa erythrocyte MEMB protein; 2.26A {Homo sapiens} SCOP: c.37.1.0
Probab=99.47 E-value=8.4e-14 Score=127.89 Aligned_cols=100 Identities=33% Similarity=0.571 Sum_probs=83.8
Q ss_pred cCCeE-EeecCcchhhhhhhhhccccccccCCC-ceEEecCCCccceeecCCCcccchhhccCccccccCHHHHHHHHHc
Q psy4417 260 SGKIC-VLDCSPVGLFTFLLGLIEGTVTAKLIP-YTYSIPICSWSSFFASDTTRPMRELEENGQNYWFTSREVMERDIQD 337 (440)
Q Consensus 260 ~g~~~-il~~~~~g~~~l~~~l~~~~~~~~~~p-~~i~i~~~~~~~f~~~~ttr~~~~~e~~g~~y~f~s~~~f~~~~~~ 337 (440)
+|+.+ |+..+..|..+|++.|+.. +| ... +..++|||+++.+|.+|++|+|++.++|.+++..
T Consensus 18 ~g~~ivl~GPSGaGKsTL~~~L~~~------~~~~~~---------~~vs~TTR~p~~gE~~G~~y~fvs~~~f~~~i~~ 82 (197)
T 3ney_A 18 GRKTLVLIGASGVGRSHIKNALLSQ------NPEKFV---------YPVPYTTRPPRKSEEDGKEYHFISTEEMTRNISA 82 (197)
T ss_dssp SCCEEEEECCTTSSHHHHHHHHHHH------CTTTEE---------CCCCEECSCCCTTCCTTSSCEECCHHHHHHHHHT
T ss_pred CCCEEEEECcCCCCHHHHHHHHHhh------CCccEE---------eeecccccCCcCCeeccccceeccHHHhhhhhhh
Confidence 46544 4444444567787777633 23 344 7789999999999999999999999999999999
Q ss_pred CceeeEEEEcCccccccHHHHHHHHhcCCeeEecCCC
Q psy4417 338 HKFLEYGEHNGHLYGTHLDSIREVILSGKICVLDCSP 374 (440)
Q Consensus 338 ~~fle~~~~~~~~yGt~~~~i~~~~~~~~~~i~~~~~ 374 (440)
++|+||+++.+|+|||+.+.|++++++|+.|+++...
T Consensus 83 ~~fle~~~~~~n~YGt~~~~v~~~l~~G~~vildid~ 119 (197)
T 3ney_A 83 NEFLEFGSYQGNMFGTKFETVHQIHKQNKIAILDIEP 119 (197)
T ss_dssp TCEEEEEEETTEEEEEEHHHHHHHHHTTCEEEEECCG
T ss_pred hhhhhhhhhhceecccchhhHHHHHhcCCeEEEEECH
Confidence 9999999999999999999999999999999998754
No 24
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=99.45 E-value=2.7e-13 Score=106.74 Aligned_cols=77 Identities=21% Similarity=0.251 Sum_probs=69.8
Q ss_pred CCCeEEEEeeCCC-CccEEEEecCCCcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcCCceee
Q psy4417 5 PHPLKKILGTGLS-PCGLTVEQDANGNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSDGNIQF 81 (440)
Q Consensus 5 ~~~r~v~l~r~g~-~lGiti~~~~~~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~~~v~l 81 (440)
.++|.|++.|+.. +|||++.++ .|.++.++|||+++| |+.||+|++|||+++ .+|+++.++|+.++..++|
T Consensus 3 ~~~r~v~l~k~~~g~~Gf~i~~g-----~I~~v~~gspA~~aG-l~~GD~Il~VNG~~v~~~~~~evv~llr~~g~~V~L 76 (82)
T 1r6j_A 3 MDPRTITMHKDSTGHVGFIFKNG-----KITSIVKDSSAARNG-LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTI 76 (82)
T ss_dssp TCCEEEEEECCTTSCCCEEEETT-----EEEEECTTSHHHHHT-CCSSEEEEEETTEECTTCCHHHHHHHHHHSCSEEEE
T ss_pred CceEEEEEEECCCCCeEEEEECC-----EEEEecCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCEEEE
Confidence 4688999999864 799999875 489999999999999 999999999999999 7999999999999999999
Q ss_pred eeccCC
Q psy4417 82 TIAPQG 87 (440)
Q Consensus 82 ~v~p~~ 87 (440)
+|.|.+
T Consensus 77 ~v~p~~ 82 (82)
T 1r6j_A 77 TIMPAF 82 (82)
T ss_dssp EEEECC
T ss_pred EEEeCC
Confidence 998863
No 25
>1z6g_A Guanylate kinase; structural genomics, SGC, structural genom consortium, transferase; HET: EPE; 2.18A {Plasmodium falciparum}
Probab=99.43 E-value=2.1e-12 Score=120.52 Aligned_cols=184 Identities=20% Similarity=0.247 Sum_probs=136.0
Q ss_pred cccCCCcccccccccccccccccccccccccccCcccccCCCCCCCCCccCCCcceecCHHHHHHhhhcCCeeEEEEEcC
Q psy4417 165 AFVPPEADYVHKIGICGTRYIKQYNTLQYNSTLMSRSFPDTTRPMRELEENGQNYWFTSREVMERDIQDHKFLEYGEHNG 244 (440)
Q Consensus 165 ~~~~~~~~~~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~ttr~~r~~e~~g~~y~fvs~~~f~~~i~~~~fle~~~~~g 244 (440)
.+.+.||+|+||.|+++.+.......+. ..+++|||++++++.+|..|.|.+.+.|..++..+.|+++..+.+
T Consensus 25 ~~~lvGpsGsGKSTLl~~L~g~~pG~i~-------~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~ 97 (218)
T 1z6g_A 25 PLVICGPSGVGKGTLIKKLLNEFPNYFY-------FSVSCTTRKKREKEKEGVDYYFIDKTIFEDKLKNEDFLEYDNYAN 97 (218)
T ss_dssp CEEEECSTTSSHHHHHHHHHHHSTTTEE-------ECCCEECSCCCSSCCBTTTBEECCHHHHHHHHHTTCEEEEEEETT
T ss_pred EEEEECCCCCCHHHHHHHHHhhCCCcEE-------EeecccCCCCCcccccCCeEEECCHHHHHHhhhccchhhhhhccc
Confidence 4445699999999988765432212333 257789999999899999999999999999988899999999999
Q ss_pred CccccchhhHHHHHhcCCeEEeecCcchhhhhhhhhccccccccCCCceEEecCCCccceeecCCCcccchhhccCcccc
Q psy4417 245 HLYGTHLDSIREVILSGKICVLDCSPVGLFTFLLGLIEGTVTAKLIPYTYSIPICSWSSFFASDTTRPMRELEENGQNYW 324 (440)
Q Consensus 245 ~~yg~~~~~i~~v~~~g~~~il~~~~~g~~~l~~~l~~~~~~~~~~p~~i~i~~~~~~~f~~~~ttr~~~~~e~~g~~y~ 324 (440)
+.||++...++++++.++.++++.+++|...++..+. ...|..+ |+.++. ...+...
T Consensus 98 ~~~g~~~~~i~~~l~~~~~~il~~~lsggq~qR~~i~------~~~~~~~---------ll~~~~---~~~Lde~----- 154 (218)
T 1z6g_A 98 NFYGTLKSEYDKAKEQNKICLFEMNINGVKQLKKSTH------IKNALYI---------FIKPPS---TDVLLSR----- 154 (218)
T ss_dssp EEEEEEHHHHHHHHHTTCEEEEEECHHHHHHHTTCSS------CCSCEEE---------EEECSC---HHHHHHH-----
T ss_pred ccCCCcHHHHHHHHhCCCcEEEEecHHHHHHHHHHhc------CCCcEEE---------EEeCcC---HHHHHHH-----
Confidence 9999998899999999999999999999887732211 0123455 777766 4333211
Q ss_pred ccCHHHHHHHHHcCceeeEEEEcCccccccHHHHHHHHhcCCeeEecCCCcHHHHHHHHHHHHHHHHHhc--CCccEEEE
Q psy4417 325 FTSREVMERDIQDHKFLEYGEHNGHLYGTHLDSIREVILSGKICVLDCSPVEEDIKRTLEESACLQRSYE--RFIDKVIV 402 (440)
Q Consensus 325 f~s~~~f~~~~~~~~fle~~~~~~~~yGt~~~~i~~~~~~~~~~i~~~~~s~e~l~~~l~~~~~~e~~~~--~~fd~vi~ 402 (440)
....+ ..+.+++.+++..... +..+. ..||++|+
T Consensus 155 ------------------------------------~~~~d-------~~~~~~i~~~l~~~~~-~~~~~h~~~~d~iiv 190 (218)
T 1z6g_A 155 ------------------------------------LLTRN-------TENQEQIQKRMEQLNI-ELHEANLLNFNLSII 190 (218)
T ss_dssp ------------------------------------HHHTC-------CCCHHHHHHHHHHHHH-HHHHHTTSCCSEEEE
T ss_pred ------------------------------------HHhcC-------CCCHHHHHHHHHHHHH-HHHhhcccCCCEEEE
Confidence 00001 2367888888876532 22233 68999999
Q ss_pred cCCHHHHHHHHHHHHHhccC
Q psy4417 403 NEDFDETFRTVIELLDTLSN 422 (440)
Q Consensus 403 Nddl~~a~~~l~~~i~~~~~ 422 (440)
|+|+++|+..+..+|.....
T Consensus 191 ~~~~~ea~~~~~~ii~~~~~ 210 (218)
T 1z6g_A 191 NDDLTLTYQQLKNYLLNSYI 210 (218)
T ss_dssp CSSHHHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999986543
No 26
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=99.37 E-value=3.3e-12 Score=102.74 Aligned_cols=83 Identities=34% Similarity=0.556 Sum_probs=74.2
Q ss_pred CCeEEEEeeCCCCccEEEEecC-CCcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcCCceeee
Q psy4417 6 HPLKKILGTGLSPCGLTVEQDA-NGNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSDGNIQFT 82 (440)
Q Consensus 6 ~~r~v~l~r~g~~lGiti~~~~-~~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~~~v~l~ 82 (440)
..+.|.+.|++++|||++.++. ..+++|.+|.++|||+++|.|+.||+|++|||.++ .+++++..+|+..++.++|+
T Consensus 4 ~~r~v~l~k~~~~lG~~i~~~~~~~~~~V~~v~~gspA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~ 83 (93)
T 3o46_A 4 SVKIIRLVKNREPLGATIKKDEQTGAIIVARIMRGGAADRSGLIHVGDELREVNGIPVEDKRPEEIIQILAQSQGAITFK 83 (93)
T ss_dssp CCEEEEEEESSSCCCEEEEECTTTCCEEEEEECTTSHHHHHTCCCTTCEEEEETTEESTTSCHHHHHHHHHHCCEEEEEE
T ss_pred cEEEEEEEeCCCCccEEEEecCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEE
Confidence 4578999999999999999853 25699999999999999999999999999999999 89999999999988899999
Q ss_pred eccCCC
Q psy4417 83 IAPQGD 88 (440)
Q Consensus 83 v~p~~~ 88 (440)
|.|...
T Consensus 84 v~~~~~ 89 (93)
T 3o46_A 84 IIPGSK 89 (93)
T ss_dssp EECC--
T ss_pred EEeCCC
Confidence 998654
No 27
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=99.34 E-value=6.3e-12 Score=102.24 Aligned_cols=82 Identities=32% Similarity=0.510 Sum_probs=72.4
Q ss_pred CCeEEEEee-CCCCccEEEEecCCCcEEEEEEcCCChhhhcCCCCCCCEEEeECCccCC--CHHHHHHHHHhcCCceeee
Q psy4417 6 HPLKKILGT-GLSPCGLTVEQDANGNLIIARILAGSLIDKQGVLKVGDVILGVNGENVS--SPEDLQIEVVKSDGNIQFT 82 (440)
Q Consensus 6 ~~r~v~l~r-~g~~lGiti~~~~~~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v~--t~~e~~~~L~~~~~~v~l~ 82 (440)
-++.|.+.| .+++||+++..+.+++++|.+|.++|||+++|+|+.||.|++|||.++. +++++..+|+..++.+.|+
T Consensus 12 ~~~~v~l~K~~~~~lG~~l~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~ING~~v~~~~~~~~~~~l~~~~~~v~L~ 91 (97)
T 2ejy_A 12 MVRLIQFEKVTEEPMGICLKLNEKQSCTVARILHGGMIHRQGSLHVGDEILEINGTNVTNHSVDQLQKAMKETKGMISLK 91 (97)
T ss_dssp -CEEEEEEECSSSCCSEEEEECTTCCEEEEEECSSSHHHHHTCCCTTCEEEEETTBCCCSSCSHHHHHHHHHCCEEEEEE
T ss_pred ccEEEEEEeCCCCCeeEEEEeCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEE
Confidence 467888877 5679999999765678999999999999999999999999999999994 6999999999888899999
Q ss_pred eccCC
Q psy4417 83 IAPQG 87 (440)
Q Consensus 83 v~p~~ 87 (440)
|.|..
T Consensus 92 V~~~~ 96 (97)
T 2ejy_A 92 VIPNQ 96 (97)
T ss_dssp EECCC
T ss_pred EEECC
Confidence 98764
No 28
>2j41_A Guanylate kinase; GMP, GMK, transferase, ATP-binding, nucleotide- binding; HET: 5GP; 1.9A {Staphylococcus aureus}
Probab=99.34 E-value=2.6e-12 Score=117.55 Aligned_cols=180 Identities=24% Similarity=0.342 Sum_probs=120.0
Q ss_pred cccCCCcccccccccccccccccccccccccccCcccccCCCCCCCCCccCCCcceecCHHHHHHhhhcCCeeEEEEEcC
Q psy4417 165 AFVPPEADYVHKIGICGTRYIKQYNTLQYNSTLMSRSFPDTTRPMRELEENGQNYWFTSREVMERDIQDHKFLEYGEHNG 244 (440)
Q Consensus 165 ~~~~~~~~~~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~ttr~~r~~e~~g~~y~fvs~~~f~~~i~~~~fle~~~~~g 244 (440)
.+.+.|++|+||+|+++.+......... ..+.+++|.++.++.+|..|.|.+.+.|..++..+.++++..+.+
T Consensus 8 ~i~l~G~~GsGKSTl~~~L~~~~~~~~~-------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (207)
T 2j41_A 8 LIVLSGPSGVGKGTVRKRIFEDPSTSYK-------YSISMTTRQMREGEVDGVDYFFKTRDAFEALIKDDQFIEYAEYVG 80 (207)
T ss_dssp EEEEECSTTSCHHHHHHHHHHCTTCCEE-------CCCCEECSCCCTTCCBTTTBEECCHHHHHHHHHTTCEEEEEEETT
T ss_pred EEEEECCCCCCHHHHHHHHHHhhCCCeE-------EecccccCCCCCCccCCCceEEcCHHHHHHHHHcCCeEEEEeECC
Confidence 4556799999999988765433211121 256788999888888899999999999999999999999999999
Q ss_pred CccccchhhHHHHHhcCCeEEeecCcchhhhhhhhhccccccccCCCceEEecCCCccceeecCC--CcccchhhccCcc
Q psy4417 245 HLYGTHLDSIREVILSGKICVLDCSPVGLFTFLLGLIEGTVTAKLIPYTYSIPICSWSSFFASDT--TRPMRELEENGQN 322 (440)
Q Consensus 245 ~~yg~~~~~i~~v~~~g~~~il~~~~~g~~~l~~~l~~~~~~~~~~p~~i~i~~~~~~~f~~~~t--tr~~~~~e~~g~~ 322 (440)
+.||...+.+++.++.|+.||++....+...+ + ..+|..+.+ |+.|+. ++-.|-.+ ++.
T Consensus 81 ~~~g~~~~~i~~~l~~g~~vv~d~~~~~~~~~--------~--~~~~~~~~i-------~~~~~~~~~~~~Rl~~-R~~- 141 (207)
T 2j41_A 81 NYYGTPVQYVKDTMDEGHDVFLEIEVEGAKQV--------R--KKFPDALFI-------FLAPPSLEHLRERLVG-RGT- 141 (207)
T ss_dssp EEEEEEHHHHHHHHHTTCEEEEECCGGGHHHH--------H--HHCTTSEEE-------EEECCC---------------
T ss_pred eecCCCHHHHHHHHHcCCeEEEEECHHHHHHH--------H--HhcCCeEEE-------EEECCCHHHHHHHHHh-cCC-
Confidence 99999999999999999999999988887666 2 222322222 676654 22221111 100
Q ss_pred ccccCHHHHHHHHHcCceeeEEEEcCccccccHHHHHHHHhcCCeeEecCCCcHHHHHHHHHHHHHHHHHhcCCccEEEE
Q psy4417 323 YWFTSREVMERDIQDHKFLEYGEHNGHLYGTHLDSIREVILSGKICVLDCSPVEEDIKRTLEESACLQRSYERFIDKVIV 402 (440)
Q Consensus 323 y~f~s~~~f~~~~~~~~fle~~~~~~~~yGt~~~~i~~~~~~~~~~i~~~~~s~e~l~~~l~~~~~~e~~~~~~fd~vi~ 402 (440)
.+.+++.+|+..... +..+...+|++|.
T Consensus 142 ---------------------------------------------------~~~~~~~~rl~~~~~-~~~~~~~~d~vI~ 169 (207)
T 2j41_A 142 ---------------------------------------------------ESDEKIQSRINEARK-EVEMMNLYDYVVV 169 (207)
T ss_dssp -----------------------------------------------------------------C-GGGGGGGCSEEEE
T ss_pred ---------------------------------------------------CCHHHHHHHHHHHHH-HHhccccCCEEEE
Confidence 124456666654321 2334457899999
Q ss_pred cCCHHHHHHHHHHHHHhccC
Q psy4417 403 NEDFDETFRTVIELLDTLSN 422 (440)
Q Consensus 403 Nddl~~a~~~l~~~i~~~~~ 422 (440)
|++++++++++.+++.....
T Consensus 170 n~~~e~~~~~i~~~l~~~~~ 189 (207)
T 2j41_A 170 NDEVELAKNRIQCIVEAEHL 189 (207)
T ss_dssp CSSHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHhhc
Confidence 99999999999999976543
No 29
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=99.31 E-value=1e-11 Score=98.98 Aligned_cols=81 Identities=33% Similarity=0.506 Sum_probs=70.1
Q ss_pred CeEEEEeeC-CCCccEEEEecCCCcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcCCceeeee
Q psy4417 7 PLKKILGTG-LSPCGLTVEQDANGNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSDGNIQFTI 83 (440)
Q Consensus 7 ~r~v~l~r~-g~~lGiti~~~~~~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~~~v~l~v 83 (440)
.|.|.+.|+ +.+||+++.++.+++++|.+|.++|||++++.|+.||+|++|||.++ .+++++.++|+...+.++|++
T Consensus 2 ~r~V~l~K~~~~~lG~~i~~~~~~~~~I~~V~~gspA~~~agL~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~~v~l~v 81 (88)
T 1kwa_A 2 SRLVQFQKNTDEPMGITLKMNELNHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKI 81 (88)
T ss_dssp CEEEEEEECSSSCCCEEEECSCGGGEEEEEECTTSHHHHHTCCCTTCEEEEETTEEGGGSCHHHHHHHHHHCCEEEEEEE
T ss_pred eEEEEEEeCCCCceeEEEEeCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCcEEEEE
Confidence 467889887 58999999985456799999999999999433999999999999999 499999999998877888888
Q ss_pred ccCC
Q psy4417 84 APQG 87 (440)
Q Consensus 84 ~p~~ 87 (440)
.+..
T Consensus 82 ~r~~ 85 (88)
T 1kwa_A 82 VPSY 85 (88)
T ss_dssp ECCC
T ss_pred ECCc
Confidence 7643
No 30
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=99.29 E-value=2.4e-11 Score=97.02 Aligned_cols=82 Identities=20% Similarity=0.297 Sum_probs=73.0
Q ss_pred CCCCeEEEEeeCCCCccEEEEecCC-CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcCCcee
Q psy4417 4 PPHPLKKILGTGLSPCGLTVEQDAN-GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSDGNIQ 80 (440)
Q Consensus 4 ~~~~r~v~l~r~g~~lGiti~~~~~-~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~~~v~ 80 (440)
.+.+|.|.+.|+..++||++.++.+ .+++|..|.++|||+++| |+.||.|++|||.++ .+++++..+|+..++.+.
T Consensus 2 ~~~~r~v~l~k~~~g~G~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~ 80 (90)
T 2he4_A 2 MLRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG-LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEAR 80 (90)
T ss_dssp TTCCEEEEEECBTTBCCEEEEECSSSSSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTSCHHHHHHHHTTSSSEEE
T ss_pred CCCcEEEEEEECCCCccEEEEccCCCCCEEEEEECCCChHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEE
Confidence 3678899999999999999998654 569999999999999999 999999999999999 456999999998888899
Q ss_pred eeeccC
Q psy4417 81 FTIAPQ 86 (440)
Q Consensus 81 l~v~p~ 86 (440)
|.+...
T Consensus 81 l~v~r~ 86 (90)
T 2he4_A 81 LLVVGP 86 (90)
T ss_dssp EEEECC
T ss_pred EEEEcc
Confidence 888754
No 31
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=99.27 E-value=2.4e-11 Score=99.56 Aligned_cols=85 Identities=27% Similarity=0.453 Sum_probs=75.8
Q ss_pred CCCCCCeEEEEeeCCCCccEEEEecCCC-cEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcCCc
Q psy4417 2 EHPPHPLKKILGTGLSPCGLTVEQDANG-NLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSDGN 78 (440)
Q Consensus 2 ~~~~~~r~v~l~r~g~~lGiti~~~~~~-~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~~~ 78 (440)
..+++++.|++.|++.+|||++.++.+. +++|..|.++|||+++|.|+.||.|++|||.++ .++.++..+++..++.
T Consensus 7 ~~~~~~~~v~l~k~~~glG~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~ 86 (104)
T 3i4w_A 7 DIPREPRRIVIHRGSTGLGFNIVGGEXGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQT 86 (104)
T ss_dssp CCCSSCEEEEEECBTTBTSEEEEECC-CCCEEEEEECTTSHHHHHCCCCTTEEEEEETTEECTTCCHHHHHHHHHTSCSE
T ss_pred CCCCccEEEEEEeCCCccCEEEECCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 3578899999999999999999987654 799999999999999999999999999999999 7889999999888888
Q ss_pred eeeeeccC
Q psy4417 79 IQFTIAPQ 86 (440)
Q Consensus 79 v~l~v~p~ 86 (440)
+.|.+...
T Consensus 87 v~l~v~r~ 94 (104)
T 3i4w_A 87 VTIIAQYK 94 (104)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEEC
Confidence 99888654
No 32
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.27 E-value=2.7e-11 Score=100.25 Aligned_cols=84 Identities=17% Similarity=0.211 Sum_probs=73.7
Q ss_pred CCCCeEEEEeeCCCCccEEEEecCC------CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhc
Q psy4417 4 PPHPLKKILGTGLSPCGLTVEQDAN------GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKS 75 (440)
Q Consensus 4 ~~~~r~v~l~r~g~~lGiti~~~~~------~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~ 75 (440)
+.+++.|.+.|.+.+|||+|.++.+ .+++|..|.++|||+++|.|+.||+|++|||.++ .+++++..+|+..
T Consensus 13 ~~~~~~v~l~k~~~glG~~i~~~~~~~~~~~~g~~V~~v~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 92 (108)
T 2d92_A 13 SPEVKIVELVKDCKGLGFSILDYQDPLDPTRSVIVIRSLVADGVAERSGGLLPGDRLVSVNEYCLDNTSLAEAVEILKAV 92 (108)
T ss_dssp CSSCEEEEEEECSSCCSEEEEEEECSSCTTCEEEEEEEECTTCHHHHHTCCCTTCEEEEESSCBCTTCCHHHHHHHHHHS
T ss_pred CCceEEEEEEECCCccCEEEecccccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 4677899999999999999998533 4599999999999999999999999999999999 6799999999985
Q ss_pred -CCceeeeeccCC
Q psy4417 76 -DGNIQFTIAPQG 87 (440)
Q Consensus 76 -~~~v~l~v~p~~ 87 (440)
++.+.|+|...+
T Consensus 93 ~~~~v~l~v~R~~ 105 (108)
T 2d92_A 93 PPGLVHLGICSGP 105 (108)
T ss_dssp CSEEEEEEEECCC
T ss_pred CCCeEEEEEEcCC
Confidence 578888887644
No 33
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.26 E-value=3e-11 Score=96.92 Aligned_cols=85 Identities=21% Similarity=0.314 Sum_probs=74.3
Q ss_pred CCCCCeEEEEeeCCCCccEEEEecCC--CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcCCc
Q psy4417 3 HPPHPLKKILGTGLSPCGLTVEQDAN--GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSDGN 78 (440)
Q Consensus 3 ~~~~~r~v~l~r~g~~lGiti~~~~~--~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~~~ 78 (440)
.+..+|.|++.|...+|||++.++.+ .+++|..|.++|||+++|.|+.||+|++|||.++ .++.++..+++..++.
T Consensus 2 ~~~~~r~v~l~k~~~glG~~l~~~~~~~~~~~V~~V~~~spA~~aGgl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~ 81 (93)
T 2dkr_A 2 SSGSSGVVELPKTDEGLGFNIMGGKEQNSPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQHEKAVELLKAAQGS 81 (93)
T ss_dssp CSSCSCEEEEECCTTCCCEEEECSSSSSCCCEEEEECTTSHHHHHCCCCTTCBEEEETTEECTTSCHHHHHHHHHHCCSE
T ss_pred CCCCCEEEEEEeCCCCccEEEecccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCc
Confidence 45678899999999999999997643 5699999999999999955999999999999999 4789999999988888
Q ss_pred eeeeeccCC
Q psy4417 79 IQFTIAPQG 87 (440)
Q Consensus 79 v~l~v~p~~ 87 (440)
+.|.+...+
T Consensus 82 v~l~v~r~~ 90 (93)
T 2dkr_A 82 VKLVVRSGP 90 (93)
T ss_dssp EEEEECCCC
T ss_pred EEEEEEeCC
Confidence 888887654
No 34
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=99.25 E-value=2.2e-11 Score=99.41 Aligned_cols=85 Identities=19% Similarity=0.237 Sum_probs=74.7
Q ss_pred CCCCCCeEEEEeeCCCCccEEEEecCC-------CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHH
Q psy4417 2 EHPPHPLKKILGTGLSPCGLTVEQDAN-------GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEV 72 (440)
Q Consensus 2 ~~~~~~r~v~l~r~g~~lGiti~~~~~-------~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L 72 (440)
+.++.++.|.+.|+..+|||++.++.+ .+++|..|.++|||+++|.|+.||.|++|||.++ .++.++..++
T Consensus 3 ~~~~~~~~v~l~~~~~~lG~~l~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~ 82 (101)
T 2jik_A 3 DYLVTEEEINLTRGPSGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLF 82 (101)
T ss_dssp GGGEEEEEEEEECCTTCCCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHH
T ss_pred CCCCccEEEEEEeCCCCCCEEEeccccCCCccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 346788899999999999999998643 4699999999999999999999999999999999 5689999999
Q ss_pred HhcCCceeeeeccC
Q psy4417 73 VKSDGNIQFTIAPQ 86 (440)
Q Consensus 73 ~~~~~~v~l~v~p~ 86 (440)
+..++.+.|.|...
T Consensus 83 ~~~g~~v~l~v~R~ 96 (101)
T 2jik_A 83 RNAGYAVSLRVQHR 96 (101)
T ss_dssp HTCCSEEEEEEEEE
T ss_pred HhCCCeEEEEEEeC
Confidence 88888888888654
No 35
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=99.25 E-value=5e-11 Score=95.28 Aligned_cols=80 Identities=23% Similarity=0.313 Sum_probs=70.2
Q ss_pred CCCeEEEEeeCCCCccEEEEecCC-CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcCCceee
Q psy4417 5 PHPLKKILGTGLSPCGLTVEQDAN-GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSDGNIQF 81 (440)
Q Consensus 5 ~~~r~v~l~r~g~~lGiti~~~~~-~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~~~v~l 81 (440)
-+||.|++.|.+.+|||++.++.+ .+++|..|.++|||+++| |+.||.|++|||.++ .++.++..+++..++.+.+
T Consensus 2 ~~~r~v~l~r~~~g~G~~~~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~ 80 (91)
T 1g9o_A 2 MLPRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAG-LLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRL 80 (91)
T ss_dssp CCCEEEEEECBTTBCCEEEEECTTCSSEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEE
T ss_pred CccEEEEEEeCCCcccEEEEecCCCCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEEE
Confidence 368899999999999999998654 579999999999999999 999999999999999 4589999999988777766
Q ss_pred eecc
Q psy4417 82 TIAP 85 (440)
Q Consensus 82 ~v~p 85 (440)
.+..
T Consensus 81 ~~~~ 84 (91)
T 1g9o_A 81 LVVD 84 (91)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 6553
No 36
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=99.25 E-value=2e-11 Score=98.36 Aligned_cols=83 Identities=22% Similarity=0.360 Sum_probs=72.7
Q ss_pred CCCCCeEEEEeeCCCCccEEEEecCC-CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcCCce
Q psy4417 3 HPPHPLKKILGTGLSPCGLTVEQDAN-GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSDGNI 79 (440)
Q Consensus 3 ~~~~~r~v~l~r~g~~lGiti~~~~~-~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~~~v 79 (440)
.|..+|.+.+.|++.++||++.++.. .+++|..|.++|||+++| |+.||.|++|||.++ .+++++..+|+..++.+
T Consensus 2 sp~~~r~v~l~~~~~~~G~~l~~~~~~~~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~ 80 (95)
T 3r68_A 2 SPHQPRVVVIKKGSNGYGFYLRAGPEQKGQIIKDIEPGSPAEAAG-LKNNDLVVAVNGKSVEALDHDGVVEMIRKGGDQT 80 (95)
T ss_dssp CCCCCEEEEEECBTTBCSCEEEEC--CCSEEEECCCTTSHHHHHT-CCTTEEEEEETTEECTTCCHHHHHHHHHTTTTEE
T ss_pred CCCCcEEEEEecCCCcccEEEEecCCCCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeE
Confidence 57889999999999999999987644 479999999999999999 999999999999999 56799999999988888
Q ss_pred eeeeccC
Q psy4417 80 QFTIAPQ 86 (440)
Q Consensus 80 ~l~v~p~ 86 (440)
.+.+...
T Consensus 81 ~~~~~r~ 87 (95)
T 3r68_A 81 TLLVLDK 87 (95)
T ss_dssp EEEEEEC
T ss_pred EEEEECC
Confidence 7777643
No 37
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=99.25 E-value=2e-11 Score=102.92 Aligned_cols=82 Identities=20% Similarity=0.304 Sum_probs=72.4
Q ss_pred CCCeEEEEeeC-CCCccEEEEecCC-----CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcC
Q psy4417 5 PHPLKKILGTG-LSPCGLTVEQDAN-----GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSD 76 (440)
Q Consensus 5 ~~~r~v~l~r~-g~~lGiti~~~~~-----~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~ 76 (440)
.+++.|.+.|+ +.+|||+|.++.+ .+++|..|.++|||+++|+|+.||+|++|||.++ .+++++..+|+..+
T Consensus 23 ~~~~~v~l~k~~~~~lGf~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~ 102 (118)
T 3b76_A 23 MHEKVVNIQKDPGESLGMTVAGGASHREWDLPIYVISVEPGGVISRDGRIKTGDILLNVDGVELTEVSRSEAVALLKRTS 102 (118)
T ss_dssp EEEEEEEEECCTTCCCCEEEEECSCSTTCCCCEEEEEECTTSHHHHHCSSCTTCEEEEETTEEGGGSCHHHHHHHHHSCC
T ss_pred CCcEEEEEEeCCCCccCEEEecCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 45677888877 4899999998752 4599999999999999999999999999999999 59999999999989
Q ss_pred CceeeeeccC
Q psy4417 77 GNIQFTIAPQ 86 (440)
Q Consensus 77 ~~v~l~v~p~ 86 (440)
+.+.|+|.+.
T Consensus 103 ~~v~L~v~R~ 112 (118)
T 3b76_A 103 SSIVLKALEV 112 (118)
T ss_dssp SEEEEEEEEE
T ss_pred CeEEEEEEEC
Confidence 9999988753
No 38
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=99.25 E-value=4.5e-11 Score=96.55 Aligned_cols=83 Identities=16% Similarity=0.324 Sum_probs=74.1
Q ss_pred CCCCeEEEEeeCCCCccEEEEecCC-----CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcC
Q psy4417 4 PPHPLKKILGTGLSPCGLTVEQDAN-----GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSD 76 (440)
Q Consensus 4 ~~~~r~v~l~r~g~~lGiti~~~~~-----~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~ 76 (440)
+.+++.+.+.|.+.+|||++.++.+ .+++|..|.++|||+++|.|+.||.|++|||.++ .++.++..+++..+
T Consensus 3 ~g~~~~v~l~k~~~~lG~~i~~g~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g 82 (96)
T 1d5g_A 3 PGDIFEVELAKNDNSLGISVTGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNTG 82 (96)
T ss_dssp TTCEEEEEEECSSSSCCEEEECCSSSCSSSSCCEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHSCC
T ss_pred CCCEEEEEEEeCCCCCCEEEECCCCCCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 5778899999999999999998643 4699999999999999999999999999999999 48899999999888
Q ss_pred CceeeeeccC
Q psy4417 77 GNIQFTIAPQ 86 (440)
Q Consensus 77 ~~v~l~v~p~ 86 (440)
+.+.|.+...
T Consensus 83 ~~v~l~v~R~ 92 (96)
T 1d5g_A 83 QVVHLLLEKG 92 (96)
T ss_dssp SEEEEEEECC
T ss_pred CeEEEEEEcC
Confidence 8888888654
No 39
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=99.24 E-value=2.1e-11 Score=102.56 Aligned_cols=84 Identities=19% Similarity=0.331 Sum_probs=74.2
Q ss_pred CCCCCeEEEEeeCCCCccEEEEecCC-----CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccCC--CHHHHHHHHHhc
Q psy4417 3 HPPHPLKKILGTGLSPCGLTVEQDAN-----GNLIIARILAGSLIDKQGVLKVGDVILGVNGENVS--SPEDLQIEVVKS 75 (440)
Q Consensus 3 ~~~~~r~v~l~r~g~~lGiti~~~~~-----~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v~--t~~e~~~~L~~~ 75 (440)
..++++.|.+.|+..+|||++.++.+ .+++|..|.++|||+++|.|+.||+|++|||.++. ++.++..+++..
T Consensus 22 ~~~~~~~v~L~k~~~glGf~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 101 (117)
T 2fne_A 22 SMPQCKSITLERGPDGLGFSIVGGYGSPHGDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRT 101 (117)
T ss_dssp -CCEEEEEEECCBTTBTSEEEEEEEEETTEEEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHC
T ss_pred CCCccEEEEEEeCCCcccEEEecccCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 35778899999999999999998642 35999999999999999999999999999999994 899999999988
Q ss_pred CCceeeeeccC
Q psy4417 76 DGNIQFTIAPQ 86 (440)
Q Consensus 76 ~~~v~l~v~p~ 86 (440)
++.+.|+|...
T Consensus 102 ~~~v~l~v~R~ 112 (117)
T 2fne_A 102 KGTVTLMVLSS 112 (117)
T ss_dssp CSSEEEEEEEC
T ss_pred CCeEEEEEEeC
Confidence 88899988764
No 40
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=99.24 E-value=4.4e-11 Score=98.38 Aligned_cols=84 Identities=18% Similarity=0.342 Sum_probs=73.3
Q ss_pred CCCeEEEEeeCCCCccEEEEecCC-------CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhc
Q psy4417 5 PHPLKKILGTGLSPCGLTVEQDAN-------GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKS 75 (440)
Q Consensus 5 ~~~r~v~l~r~g~~lGiti~~~~~-------~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~ 75 (440)
.+.+.|.+.|++.+|||++.++.+ .+++|..|.++|||+++|.|+.||.|++|||.++ .++.++..+++..
T Consensus 2 e~~~~v~l~k~~~glG~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 81 (105)
T 2awx_A 2 EKIMEIKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNSVSLEEVTHEEAVTALKNT 81 (105)
T ss_dssp -CEEEEEEECBTTBSSEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHSC
T ss_pred CeEEEEEEEECCCCCCEEEeCccCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 456789999999999999998643 3699999999999999999999999999999999 6789999999888
Q ss_pred CCceeeeeccCCC
Q psy4417 76 DGNIQFTIAPQGD 88 (440)
Q Consensus 76 ~~~v~l~v~p~~~ 88 (440)
++.+.|.|.....
T Consensus 82 ~~~v~l~v~R~~~ 94 (105)
T 2awx_A 82 SDFVYLKVAKPTS 94 (105)
T ss_dssp CSEEEEEEECCCC
T ss_pred CCeEEEEEEcCCC
Confidence 8889999876543
No 41
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.23 E-value=3.2e-11 Score=96.72 Aligned_cols=85 Identities=32% Similarity=0.465 Sum_probs=74.0
Q ss_pred CCCCCeEEEEee-CCCCccEEEEecCCCcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC-CCHHHHHHHHHhcCCcee
Q psy4417 3 HPPHPLKKILGT-GLSPCGLTVEQDANGNLIIARILAGSLIDKQGVLKVGDVILGVNGENV-SSPEDLQIEVVKSDGNIQ 80 (440)
Q Consensus 3 ~~~~~r~v~l~r-~g~~lGiti~~~~~~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v-~t~~e~~~~L~~~~~~v~ 80 (440)
.+..+|.|.+.| .+.+||+++.+ ...+++|..|.++|||+++|.|+.||+|++|||.++ .+++++..+|+..++.+.
T Consensus 3 ~~~~~r~v~l~k~~~~~lG~~i~~-~~~~v~V~~V~~~spA~~ag~L~~GD~I~~ing~~v~~~~~~~~~~l~~~~~~v~ 81 (91)
T 2e7k_A 3 SGSSGRMVGIRKTAGEHLGVTFRV-EGGELVIARILHGGMVAQQGLLHVGDIIKEVNGQPVGSDPRALQELLRNASGSVI 81 (91)
T ss_dssp CCCCSCBCCBCCCTTCCCCEEEEE-SSSSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCHHHHHHHHHTCCSSBC
T ss_pred CCCCcEEEEEEECCCCcEeEEEEe-cCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCHHHHHHHHHcCCCeEE
Confidence 355677788865 56799999988 456799999999999999887999999999999999 999999999998888999
Q ss_pred eeeccCCC
Q psy4417 81 FTIAPQGD 88 (440)
Q Consensus 81 l~v~p~~~ 88 (440)
|++.+...
T Consensus 82 l~v~~~~~ 89 (91)
T 2e7k_A 82 LKILSGPS 89 (91)
T ss_dssp EEEECCSC
T ss_pred EEEEECCc
Confidence 99987643
No 42
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=99.23 E-value=8.3e-11 Score=101.07 Aligned_cols=84 Identities=14% Similarity=0.216 Sum_probs=73.6
Q ss_pred CCCCeEEEEeeC-CCCccEEEEecCCC--------------cEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHH
Q psy4417 4 PPHPLKKILGTG-LSPCGLTVEQDANG--------------NLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPE 66 (440)
Q Consensus 4 ~~~~r~v~l~r~-g~~lGiti~~~~~~--------------~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~ 66 (440)
..+++.|++.|. ..+|||+|.++... +++|..|.++|||+++| |+.||+|++|||.++ .+++
T Consensus 25 ~~~~r~v~l~r~~~~g~Gf~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~gspA~~aG-L~~GD~Il~Vng~~v~~~~~~ 103 (132)
T 3l4f_D 25 IIKEKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAG-LRMGDFLIEVNGQNVVKVGHR 103 (132)
T ss_dssp CCCCCEEEEECCTTSCCCEEEEEECCSSCCSCCCCCTTSCCSEEEEEECTTSGGGGGT-CCTTCEEEEESSSBCTTSCHH
T ss_pred CCCCEEEEEEECCCCcEeEEEeccCCCCccccccccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHH
Confidence 356778999884 47999999987652 58999999999999999 999999999999999 5899
Q ss_pred HHHHHHHhcCCceeeeeccCCC
Q psy4417 67 DLQIEVVKSDGNIQFTIAPQGD 88 (440)
Q Consensus 67 e~~~~L~~~~~~v~l~v~p~~~ 88 (440)
++..+|+..++.+.|+|.+...
T Consensus 104 ~~~~~l~~~g~~v~l~v~~~~~ 125 (132)
T 3l4f_D 104 QVVNMIRQGGNTLMVKVVMVTR 125 (132)
T ss_dssp HHHHHHHHTTTEEEEEEECCCC
T ss_pred HHHHHHHcCCCEEEEEEEECCC
Confidence 9999999999999999987653
No 43
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.23 E-value=4.5e-11 Score=98.32 Aligned_cols=85 Identities=18% Similarity=0.332 Sum_probs=74.6
Q ss_pred CCCCeEEEEeeCCCCccEEEEecCC--------CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHH
Q psy4417 4 PPHPLKKILGTGLSPCGLTVEQDAN--------GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVV 73 (440)
Q Consensus 4 ~~~~r~v~l~r~g~~lGiti~~~~~--------~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~ 73 (440)
+.+...+++.|+..+|||+|.++.+ .+++|..|.++|||+++|.|+.||.|++|||+++ .++.++..+|+
T Consensus 5 ~~~~~~v~l~~~~~glG~~l~~g~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~ 84 (105)
T 1wha_A 5 SSGRHVACLARSERGLGFSIAGGKGSTPYRAGDAGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVTEARHDHAVSLLT 84 (105)
T ss_dssp CCEEEEEEECCCTTCCSCEEECCTTSCCSSTTCCSCEEEECCTTSSHHHHSSCCTTCEEEEESSCBCTTCCHHHHHHHHT
T ss_pred CCeeEEEEEEeCCCccCEEEEeccCCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 4566788888999999999998653 4699999999999999999999999999999999 45999999999
Q ss_pred hcCCceeeeeccCCC
Q psy4417 74 KSDGNIQFTIAPQGD 88 (440)
Q Consensus 74 ~~~~~v~l~v~p~~~ 88 (440)
..++.+.|.|.....
T Consensus 85 ~~g~~v~l~v~R~~~ 99 (105)
T 1wha_A 85 AASPTIALLLEREAG 99 (105)
T ss_dssp SCCSCEEEEEEECCC
T ss_pred cCCCeEEEEEEECCC
Confidence 888889999987653
No 44
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=99.23 E-value=8.3e-12 Score=100.00 Aligned_cols=82 Identities=24% Similarity=0.292 Sum_probs=71.4
Q ss_pred CCCCeEEEEeeCCCCccEEEEecCC-CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccCC--CHHHHHHHHHhcCCcee
Q psy4417 4 PPHPLKKILGTGLSPCGLTVEQDAN-GNLIIARILAGSLIDKQGVLKVGDVILGVNGENVS--SPEDLQIEVVKSDGNIQ 80 (440)
Q Consensus 4 ~~~~r~v~l~r~g~~lGiti~~~~~-~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v~--t~~e~~~~L~~~~~~v~ 80 (440)
++.||.|++.|++.+|||++.+..+ .+++|..|.++|||+++| |+.||.|++|||.++. +++++..+|+..++.+.
T Consensus 1 ~~~pr~v~l~k~~~~~G~~l~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~ 79 (91)
T 2vsp_A 1 SMKPKLCRLAKGENGYGFHLNAIRGLPGSFIKEVQKGGPADLAG-LEDEDVIIEVNGVNVLDEPYEKVVDRIQSSGKNVT 79 (91)
T ss_dssp -CCEEEEEEECBTTBTSCCCBCCTTCSCCBC-CCCTTSHHHHTT-CCTTCEEEEETTEECTTSCHHHHHHHHTTSCSEEE
T ss_pred CCCcEEEEEEeCCCcccEEEEeccCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEE
Confidence 4678999999999999999987543 568999999999999999 9999999999999995 99999999997788899
Q ss_pred eeeccC
Q psy4417 81 FTIAPQ 86 (440)
Q Consensus 81 l~v~p~ 86 (440)
|++...
T Consensus 80 l~v~r~ 85 (91)
T 2vsp_A 80 LLVCGK 85 (91)
T ss_dssp EEEEC-
T ss_pred EEEEeC
Confidence 988754
No 45
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=99.22 E-value=8.4e-11 Score=95.23 Aligned_cols=84 Identities=20% Similarity=0.332 Sum_probs=72.8
Q ss_pred CCCeEEEEeeCCCCccEEEEecCC--CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcCCcee
Q psy4417 5 PHPLKKILGTGLSPCGLTVEQDAN--GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSDGNIQ 80 (440)
Q Consensus 5 ~~~r~v~l~r~g~~lGiti~~~~~--~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~~~v~ 80 (440)
.+.+.|.+.+.+.+|||++.++.+ .+++|..|.++|||+++|.|+.||+|++|||.++ .+++++..+|+..++.+.
T Consensus 4 ~~~~~v~l~~~~~~lG~~i~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~v~ 83 (97)
T 1n7e_A 4 AIIYTVELKRYGGPLGITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVT 83 (97)
T ss_dssp CCEEEEEEECTTSCCCEEEECCSSTTSCCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEE
T ss_pred ceEEEEEEEeCCCCcCEEEEcccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 455678888888889999998654 5699999999999999999999999999999999 578999999987788899
Q ss_pred eeeccCCC
Q psy4417 81 FTIAPQGD 88 (440)
Q Consensus 81 l~v~p~~~ 88 (440)
|.|.....
T Consensus 84 l~v~R~~~ 91 (97)
T 1n7e_A 84 LKIKKQTD 91 (97)
T ss_dssp EEEECCCC
T ss_pred EEEEeCCC
Confidence 99876543
No 46
>2lj0_A Sorbin and SH3 domain-containing protein 1; R85FL, ponsin, CAP, signaling protein; NMR {Homo sapiens} PDB: 2lj1_A
Probab=99.21 E-value=7.3e-12 Score=94.02 Aligned_cols=58 Identities=22% Similarity=0.536 Sum_probs=51.1
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
+.+.+||+|||.|..++ +|+|++||++.|++..+++||.++... ++..|+||++++++
T Consensus 5 ~~~~~~Alydy~a~~~~-------ELs~~~Gd~i~v~~~~~~gWw~g~~~~-~g~~G~~P~nyVe~ 62 (65)
T 2lj0_A 5 DLFSYQALYSYIPQNDD-------ELELRDGDIVDVMEKCDDGWFVGTSRR-TKQFGTFPGNYVKP 62 (65)
T ss_dssp SSCEEEESSCBCCSSTT-------BCCBCTTCEEEEEEECTTSEEEEEETT-TCCEEEEETTSEEE
T ss_pred cCEEEEEceeECCCCcC-------CcCCCCCCEEEEeEeCCCCEEEEEECC-CCCEEEEehhHeEE
Confidence 45678999999999887 999999999999999999999998753 47899999999853
No 47
>2lx7_A GAS-7, growth arrest-specific protein 7; structural genomics, northeast structural genomics consortiu target HR8574A, PSI-biology; NMR {Homo sapiens}
Probab=99.21 E-value=6.2e-12 Score=92.80 Aligned_cols=54 Identities=22% Similarity=0.590 Sum_probs=47.3
Q ss_pred ccccccccCCCCCCCCCCCcccc-ceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHH
Q psy4417 98 CYMRCLFTYDPKEDSLLPCKEIG-LAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELE 160 (440)
Q Consensus 98 ~~vRal~dy~p~~d~~~p~~e~~-L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~ 160 (440)
..+||+|||.|+.++ + |+|++||++.|+++.+++||.++.. ++..|+||++|++
T Consensus 4 ~~~rAlydy~~~~~~-------e~Ls~~~Gd~i~v~~~~~~~Ww~g~~~--~G~~G~fP~nyVe 58 (60)
T 2lx7_A 4 ARCRTLYPFSGERHG-------QGLRFAAGELITLLQVPDGGWWEGEKE--DGLRGWFPASYVQ 58 (60)
T ss_dssp CEEEESCCCCSCCCS-------SCCCCCTTCEEEBSCCCTTSCEEEECT--TSCEEEECGGGEE
T ss_pred CEEEECcccCCCCCC-------CCccCCCCCEEEEeEecCCCeEEEEeC--CCCEEEEcHHHEE
Confidence 468999999998765 5 9999999999999999999999863 4689999999974
No 48
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=99.20 E-value=8.3e-11 Score=95.10 Aligned_cols=81 Identities=21% Similarity=0.236 Sum_probs=69.2
Q ss_pred CCCeEEEEeeCC-CCccEEEEe-------cCC--CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHH
Q psy4417 5 PHPLKKILGTGL-SPCGLTVEQ-------DAN--GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEV 72 (440)
Q Consensus 5 ~~~r~v~l~r~g-~~lGiti~~-------~~~--~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L 72 (440)
+.++.|++.|.+ .+|||+|.+ +.+ .+++|..|.++|||+++| |+.||.|++|||.++ .+++++..+|
T Consensus 3 ~~~r~v~l~k~~~~~~Gf~l~~~g~~~~~~~~~~~~~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l 81 (96)
T 2ego_A 3 QQRKVLTLEKGDNQTFGFEIQTYGLHHREEQRVEMVTFVARVHESSPAQLAG-LTPGDTIASVNGLNVEGIRHREIVDII 81 (96)
T ss_dssp CCEEEEEEECCTTCCCSEEEEEEEC-------CCEEEEEEEECTTCHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CccEEEEEEeCCCCCccEEEEeccccccCCCCCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 567889999876 699999986 222 358999999999999999 999999999999999 4489999999
Q ss_pred HhcCCceeeeeccC
Q psy4417 73 VKSDGNIQFTIAPQ 86 (440)
Q Consensus 73 ~~~~~~v~l~v~p~ 86 (440)
+..++.+.|+|.+.
T Consensus 82 ~~~~~~v~l~v~~~ 95 (96)
T 2ego_A 82 KASGNVLRLETLYG 95 (96)
T ss_dssp HHTTTEEEEEEECC
T ss_pred HhCCCeEEEEEEEC
Confidence 98888899988764
No 49
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.20 E-value=1e-10 Score=98.33 Aligned_cols=86 Identities=22% Similarity=0.352 Sum_probs=75.7
Q ss_pred CCCCeEEEEeeCC-CCccEEEEecCC---CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcCC
Q psy4417 4 PPHPLKKILGTGL-SPCGLTVEQDAN---GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSDG 77 (440)
Q Consensus 4 ~~~~r~v~l~r~g-~~lGiti~~~~~---~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~~ 77 (440)
..+++.|.+.+.. .+|||++.++.+ ++++|.+|.++|||+++|+|+.||+|++|||.++ .+++++..+|+..++
T Consensus 13 ~~~~~~v~l~k~~~~~lG~~i~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~Il~Ing~~v~~~~~~~~~~~l~~~g~ 92 (117)
T 1v62_A 13 ASGPLMVEIVKTPGSALGISLTTTSLRNKSVITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSLLEATKLLASISE 92 (117)
T ss_dssp SSSSEEEEEECCTTCCCCCEEEEECCSSSCEEEEEECCTTSHHHHHTCCCTTCBEEEETTEETTSCCHHHHHHHHHSCSS
T ss_pred CCCcEEEEEEcCCCCcccEEEEccCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 4678889998875 799999998643 3499999999999999999999999999999999 889999999998889
Q ss_pred ceeeeeccCCCC
Q psy4417 78 NIQFTIAPQGDD 89 (440)
Q Consensus 78 ~v~l~v~p~~~~ 89 (440)
.+.|+|.+....
T Consensus 93 ~v~l~v~r~~~~ 104 (117)
T 1v62_A 93 KVRLEILPVPQS 104 (117)
T ss_dssp EEEEEECCBTTB
T ss_pred eEEEEEEECCCC
Confidence 999999876543
No 50
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=99.20 E-value=5.6e-11 Score=100.40 Aligned_cols=85 Identities=15% Similarity=0.248 Sum_probs=69.4
Q ss_pred CCCCCeEEEEeeCC-CCccEEEEecCC-----CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHh
Q psy4417 3 HPPHPLKKILGTGL-SPCGLTVEQDAN-----GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVK 74 (440)
Q Consensus 3 ~~~~~r~v~l~r~g-~~lGiti~~~~~-----~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~ 74 (440)
.+++++.|.+.|+. .+|||+|.++.+ .+++|..|.++|||+++|.|+.||+|++|||.++ .++.++..+|+.
T Consensus 21 ~~~~~~~v~l~k~~~~~lGf~i~gg~~~~~~~~~~~V~~V~~~spA~~aggL~~GD~Il~VnG~~v~~~~~~~~~~~l~~ 100 (120)
T 2iwo_A 21 QSMGLRTVEMKKGPTDSLGISIAGGVGSPLGDVPIFIAMMHPTGVAAQTQKLRVGDRIVTICGTSTEGMTHTQAVNLLKN 100 (120)
T ss_dssp ----CEEEEEEC----CCCEEEEEEEEETTEEEEEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCBHHHHHHHHHH
T ss_pred CCCCcEEEEEEcCCCCCCCEEEecccCCCCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 45788899999876 499999998643 3599999999999999944999999999999999 579999999999
Q ss_pred cCCceeeeeccCC
Q psy4417 75 SDGNIQFTIAPQG 87 (440)
Q Consensus 75 ~~~~v~l~v~p~~ 87 (440)
.++.++|+|....
T Consensus 101 ~~~~v~l~v~r~g 113 (120)
T 2iwo_A 101 ASGSIEMQVVAGG 113 (120)
T ss_dssp CCSEEEEEEECCT
T ss_pred CCCeEEEEEEECC
Confidence 9989999997654
No 51
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=99.20 E-value=9.3e-11 Score=94.72 Aligned_cols=82 Identities=18% Similarity=0.291 Sum_probs=71.9
Q ss_pred CCCeEEEEeeCCCCccEEEEecCC----CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccCC--CHHHHHHHHHhcCCc
Q psy4417 5 PHPLKKILGTGLSPCGLTVEQDAN----GNLIIARILAGSLIDKQGVLKVGDVILGVNGENVS--SPEDLQIEVVKSDGN 78 (440)
Q Consensus 5 ~~~r~v~l~r~g~~lGiti~~~~~----~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v~--t~~e~~~~L~~~~~~ 78 (440)
+.+|.|.+.|++.+|||++.+..+ .+++|..|.++|||+++| |+.||.|++|||.++. +++++..+|+..+..
T Consensus 2 ~~~r~v~l~k~~~~~G~~l~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~ 80 (96)
T 2v90_A 2 MKPRCLHLEKGPQGFGFLLREEKGLDGRPGQFLWEVDPGLPAKKAG-MQAGDRLVAVAGESVEGLGHEETVSRIQGQGSC 80 (96)
T ss_dssp CCCEEEEEECBTTBSCEEEEEEECTTSCEEEEEEEECTTSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHTTTTE
T ss_pred CCCEEEEEEeCCCcccEEEEeccCCCCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCE
Confidence 578899999999999999987432 259999999999999999 9999999999999994 499999999987888
Q ss_pred eeeeeccCC
Q psy4417 79 IQFTIAPQG 87 (440)
Q Consensus 79 v~l~v~p~~ 87 (440)
+.|.+....
T Consensus 81 v~l~v~r~~ 89 (96)
T 2v90_A 81 VSLTVVDPE 89 (96)
T ss_dssp EEEEEECCC
T ss_pred EEEEEECCC
Confidence 999987643
No 52
>2ege_A Uncharacterized protein KIAA1666; SH3 domain, KIAA1666 protein, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.20 E-value=9.3e-12 Score=96.26 Aligned_cols=63 Identities=25% Similarity=0.434 Sum_probs=56.4
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEee-cCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILN-QKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~-~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
...+++|+|||.+..++.+||.+.+|+|++||+++|++ ..+.+||+++. ++..|+||++|+++
T Consensus 6 ~~~~~~Alydy~~~~~~~~~~~~~eLsf~~Gd~i~v~~~~~~~gWw~g~~---~g~~G~fP~~yv~~ 69 (75)
T 2ege_A 6 SGKIMIAALDYDPGDGQMGGQGKGRLALRAGDVVMVYGPMDDQGFYYGEL---GGHRGLVPAHLLDH 69 (75)
T ss_dssp CSEEEEESSCBCTTTTCCCSSSCCBCCBCTTCEEEEESCCCTTCEEEEES---SSCEEEEETTTEEE
T ss_pred CCcEEEECCCCCCCccccCCCCCCcceECCCCEEEEeEccCCCCEEEEEE---CCcEEEEChHHeEE
Confidence 45679999999999988889988999999999999997 58999999997 57899999999864
No 53
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.19 E-value=1.3e-10 Score=96.42 Aligned_cols=82 Identities=20% Similarity=0.249 Sum_probs=69.9
Q ss_pred CCCCeEEEEeeCCCCccEEEEecCC----CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcC-
Q psy4417 4 PPHPLKKILGTGLSPCGLTVEQDAN----GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSD- 76 (440)
Q Consensus 4 ~~~~r~v~l~r~g~~lGiti~~~~~----~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~- 76 (440)
+++.+.+++.|+ .+|||+|.++.+ .+++|..|.++|||+++|+|+.||+|++|||+++ .+++++.++|+...
T Consensus 13 ~~~~~~v~l~k~-~glG~~i~gg~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~Il~Vng~~~~~~~~~~~~~~l~~~~~ 91 (109)
T 1wi4_A 13 DPAFRVITVTKE-TGLGLKILGGINRNEGPLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAKSIITRAKL 91 (109)
T ss_dssp CTTEEEEEECCS-SCCCEEEEECSSSSSCSSEEEEEECTTSHHHHHCSCCTTCBEEEETTSCCTTCCHHHHHHHHHHSCC
T ss_pred CCcEEEEEEeCC-CccCEEEEeccCCCCCCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcccc
Confidence 567778888775 899999998643 2599999999999999999999999999999999 57999999999654
Q ss_pred ---CceeeeeccC
Q psy4417 77 ---GNIQFTIAPQ 86 (440)
Q Consensus 77 ---~~v~l~v~p~ 86 (440)
..+.+.+.+.
T Consensus 92 r~~~~~~l~v~R~ 104 (109)
T 1wi4_A 92 RSESPWEIAFIRS 104 (109)
T ss_dssp SSSSCEEEEEECC
T ss_pred CCCceEEEEEEeC
Confidence 5677777664
No 54
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.19 E-value=1e-10 Score=96.50 Aligned_cols=83 Identities=16% Similarity=0.292 Sum_probs=72.3
Q ss_pred CCCCeEEEEeeCCCCccEEEEecC----------CCcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHH
Q psy4417 4 PPHPLKKILGTGLSPCGLTVEQDA----------NGNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIE 71 (440)
Q Consensus 4 ~~~~r~v~l~r~g~~lGiti~~~~----------~~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~ 71 (440)
..+++.|.+.|.+.+|||+|.++. ..+++|..|.++|||+++|.|+.||+|++|||.++ .++.++..+
T Consensus 6 ~~~~~~v~l~k~~~~lG~~i~g~~~~~~~~~~~~~~gv~V~~V~~~spA~~aggL~~GD~Il~vng~~v~~~~~~~~~~~ 85 (107)
T 1uhp_A 6 SGKSLTLVLHRDSGSLGFNIIGGRPSVDNHDGSSSEGIFVSKIVDSGPAAKEGGLQIHDRIIEVNGRDLSRATHDQAVEA 85 (107)
T ss_dssp SSEEEEEEECCSSSCCSEEEECCCSCCCCTTSSCSCCCEEEEECSSSHHHHTTCCCSSCEEEEETTEECTTCCHHHHHHH
T ss_pred CcEEEEEEEEeCCCccCEEEEcCCCCcccccccCCCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 466788999999999999999754 24699999999999999933999999999999999 679999999
Q ss_pred HHhcCCceeeeeccC
Q psy4417 72 VVKSDGNIQFTIAPQ 86 (440)
Q Consensus 72 L~~~~~~v~l~v~p~ 86 (440)
++..++.+.|.|...
T Consensus 86 ~~~~~~~v~l~v~R~ 100 (107)
T 1uhp_A 86 FKTAKEPIVVQVLRR 100 (107)
T ss_dssp HHHCCSSEEEEEEEC
T ss_pred HHcCCCcEEEEEEeC
Confidence 998888999888654
No 55
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.19 E-value=7.6e-11 Score=97.91 Aligned_cols=83 Identities=23% Similarity=0.359 Sum_probs=74.2
Q ss_pred CCCeEEEEeeCCCCccEEEEecCCCcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcCCceeee
Q psy4417 5 PHPLKKILGTGLSPCGLTVEQDANGNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSDGNIQFT 82 (440)
Q Consensus 5 ~~~r~v~l~r~g~~lGiti~~~~~~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~~~v~l~ 82 (440)
.+++.+.+.+.+.+|||++.++.+.+++|..|.++|||+++|.|+.||+|++|||..+ .+++++..+|+..++.+.|.
T Consensus 14 ~~~~~v~l~~~~~~lG~~l~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~v~l~ 93 (111)
T 2dlu_A 14 GHVEEVELINDGSGLGFGIVGGKTSGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQVAQVLRNCGNSVRML 93 (111)
T ss_dssp SEEEEEEEECCSSCCCEEEECCSSSSBEEEEECTTSSHHHHTCCCSSCEEEEESSCCCTTSCHHHHHHHHHHHCSEEEEE
T ss_pred CceEEEEEEeCCCccCEEEeccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEE
Confidence 4567899999999999999987667899999999999999999999999999999999 47899999999888889999
Q ss_pred eccCC
Q psy4417 83 IAPQG 87 (440)
Q Consensus 83 v~p~~ 87 (440)
|....
T Consensus 94 v~R~~ 98 (111)
T 2dlu_A 94 VARDP 98 (111)
T ss_dssp EEESC
T ss_pred EEeCC
Confidence 87644
No 56
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.19 E-value=1.1e-10 Score=98.07 Aligned_cols=85 Identities=18% Similarity=0.208 Sum_probs=73.6
Q ss_pred CCCCeEEEEeeCC-------CCccEEEEecCCC-------cEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHH
Q psy4417 4 PPHPLKKILGTGL-------SPCGLTVEQDANG-------NLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPED 67 (440)
Q Consensus 4 ~~~~r~v~l~r~g-------~~lGiti~~~~~~-------~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e 67 (440)
+...+.+.+.|.. .+|||+|.++.+. +++|..|.++|||+++|.|+.||+|++|||.++ .++.+
T Consensus 10 ~~~~~~v~l~r~~~~~~~~~~glG~~i~g~~~~~~~~~~~g~~V~~v~~~s~A~~aG~L~~GD~Il~vng~~v~~~~~~~ 89 (117)
T 1ujd_A 10 IFPHARIKITRDSKDHTVSGNGLGIRIVGGKEIPGHSGEIGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYEE 89 (117)
T ss_dssp SSCEEEEEECCCSSSSCSSCCSCSEEEEEEEECSSSSSCEEEEEEEECTTCHHHHHSSCCTTCEEEEETTEECTTCCHHH
T ss_pred CCceEEEEEEecCcccCCCCCcccEEEeCCCCCCcccCCcCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHH
Confidence 4556778888876 7999999986532 599999999999999999999999999999999 67999
Q ss_pred HHHHHHhcCCceeeeeccCCC
Q psy4417 68 LQIEVVKSDGNIQFTIAPQGD 88 (440)
Q Consensus 68 ~~~~L~~~~~~v~l~v~p~~~ 88 (440)
+..+|+..++.+.|+|.....
T Consensus 90 ~~~~l~~~~~~v~l~v~R~~~ 110 (117)
T 1ujd_A 90 VQSIISQQSGEAEICVRLDLN 110 (117)
T ss_dssp HHHHHSCCSSCEEEEEESSCC
T ss_pred HHHHHhcCCCEEEEEEEECCc
Confidence 999999988999999976554
No 57
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=99.19 E-value=1.2e-10 Score=94.34 Aligned_cols=82 Identities=21% Similarity=0.319 Sum_probs=72.8
Q ss_pred CCCeEEEEeeCCCCccEEEEecCC---CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcCCce
Q psy4417 5 PHPLKKILGTGLSPCGLTVEQDAN---GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSDGNI 79 (440)
Q Consensus 5 ~~~r~v~l~r~g~~lGiti~~~~~---~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~~~v 79 (440)
++++.|.+.++..+|||++.++.+ ++++|..|.++|||+++|.|+.||.|++|||.++ .++.++..+++..++.+
T Consensus 3 g~~~~v~l~~~~~~lG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v 82 (98)
T 2opg_A 3 GCETTIEISKGRTGLGLSIVGGSDTLLGAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLRKATHDEAINVLRQTPQRV 82 (98)
T ss_dssp CEEEEEEEECBTTBTCEEEEECTTSTTCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEE
T ss_pred CCEEEEEEEECCCcccEEEecCCCCCCCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeE
Confidence 456789999999999999998765 5799999999999999999999999999999999 45889999998888888
Q ss_pred eeeeccC
Q psy4417 80 QFTIAPQ 86 (440)
Q Consensus 80 ~l~v~p~ 86 (440)
.|.+...
T Consensus 83 ~l~v~R~ 89 (98)
T 2opg_A 83 RLTLYRD 89 (98)
T ss_dssp EEEEEEC
T ss_pred EEEEEcC
Confidence 8888654
No 58
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=99.19 E-value=1.5e-10 Score=93.01 Aligned_cols=80 Identities=21% Similarity=0.375 Sum_probs=70.4
Q ss_pred CCeEEEEeeCCCCccEEEEecCC-------CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcC
Q psy4417 6 HPLKKILGTGLSPCGLTVEQDAN-------GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSD 76 (440)
Q Consensus 6 ~~r~v~l~r~g~~lGiti~~~~~-------~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~ 76 (440)
+.+.|++.|++.+|||++.++.+ .+++|..|.++|||+++|.|+.||.|++|||.++ .++.++..+++..+
T Consensus 3 ~~~~v~l~k~~~g~G~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~ 82 (94)
T 2fe5_A 3 TIMEVNLLKGPKGLGFSIAGGIGNQHIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTS 82 (94)
T ss_dssp CEEEEEEECCTTCSCEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHTCC
T ss_pred EEEEEEEEECCCCCCEEEEcccCCCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 56789999999999999998643 3699999999999999999999999999999999 45899999998888
Q ss_pred Cceeeeecc
Q psy4417 77 GNIQFTIAP 85 (440)
Q Consensus 77 ~~v~l~v~p 85 (440)
+.+.|.+..
T Consensus 83 ~~v~l~v~R 91 (94)
T 2fe5_A 83 DMVYLKVAK 91 (94)
T ss_dssp SEEEEEEEC
T ss_pred CeEEEEEEc
Confidence 888888864
No 59
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=99.18 E-value=1.3e-10 Score=94.91 Aligned_cols=82 Identities=18% Similarity=0.280 Sum_probs=72.4
Q ss_pred CCeEEEEeeCCCCccEEEEecCC-------CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcC
Q psy4417 6 HPLKKILGTGLSPCGLTVEQDAN-------GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSD 76 (440)
Q Consensus 6 ~~r~v~l~r~g~~lGiti~~~~~-------~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~ 76 (440)
+.+.|.+.|++.+|||++.++.+ .+++|..|.++|||+++|.|+.||.|++|||.++ .++.++..+++..+
T Consensus 4 ~~~~v~l~k~~~glG~~i~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~g 83 (102)
T 2i1n_A 4 KYEEIVLERGNSGLGFSIAGGIDNPHVPDDPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVHSRAVEALKEAG 83 (102)
T ss_dssp EEEEEEEECBTTBTSEEEEECTTSCSSTTCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHHSC
T ss_pred eEEEEEEEECCCcCCEEEEcccCCCCcCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 35678899999999999998643 4699999999999999999999999999999999 56899999999888
Q ss_pred CceeeeeccCC
Q psy4417 77 GNIQFTIAPQG 87 (440)
Q Consensus 77 ~~v~l~v~p~~ 87 (440)
+.+.|.|....
T Consensus 84 ~~v~l~v~R~~ 94 (102)
T 2i1n_A 84 PVVRLVVRRRQ 94 (102)
T ss_dssp SEEEEEEEEEC
T ss_pred CeEEEEEEeCC
Confidence 99999987654
No 60
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=99.18 E-value=6.2e-11 Score=99.67 Aligned_cols=81 Identities=19% Similarity=0.303 Sum_probs=71.9
Q ss_pred CCCeEEEEeeCCCCccEEEEecCC-------CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhc
Q psy4417 5 PHPLKKILGTGLSPCGLTVEQDAN-------GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKS 75 (440)
Q Consensus 5 ~~~r~v~l~r~g~~lGiti~~~~~-------~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~ 75 (440)
.+.+.|.+.|++.+|||+|.++.+ .+++|..|.++|||+++|.|+.||+|++|||.++ .+++++..+|+..
T Consensus 23 ~~~~~v~l~k~~~glG~~i~gg~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 102 (117)
T 2byg_A 23 MTVVEIKLFKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEEAVAILKNT 102 (117)
T ss_dssp EEEEEEEEECBTTBSSEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTC
T ss_pred CceEEEEEEeCCCCcCEEEEcccCCCCccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 456778888888999999998643 4599999999999999999999999999999999 4899999999988
Q ss_pred CCceeeeecc
Q psy4417 76 DGNIQFTIAP 85 (440)
Q Consensus 76 ~~~v~l~v~p 85 (440)
+..+.|+|..
T Consensus 103 g~~v~l~v~R 112 (117)
T 2byg_A 103 SEVVYLKVGK 112 (117)
T ss_dssp CSEEEEEEEE
T ss_pred CCeEEEEEEe
Confidence 8889888864
No 61
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.18 E-value=1.4e-10 Score=94.81 Aligned_cols=83 Identities=19% Similarity=0.287 Sum_probs=73.3
Q ss_pred CCCCCeEEEEeeCCCCccEEEEecCC-CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcCCce
Q psy4417 3 HPPHPLKKILGTGLSPCGLTVEQDAN-GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSDGNI 79 (440)
Q Consensus 3 ~~~~~r~v~l~r~g~~lGiti~~~~~-~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~~~v 79 (440)
..+.+|.|++.|+..+|||++.++.+ .+++|..|.++|||+++| |+.||.|++|||.++ .+++++..+|+..++.+
T Consensus 3 ~~~~~r~v~l~k~~~g~G~~l~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v 81 (102)
T 2d90_A 3 SGSSGRVVVIKKGSNGYGFYLRAGPEQKGQIIKDIEPGSPAEAAG-LKNNDLVVAVNGKSVEALDHDGVVEMIRKGGDQT 81 (102)
T ss_dssp SCSSSEEEEEECCSSSSSCEEEECSSSSSEEEECCCTTSTTTTTT-CCTTCEEEEESSCBCTTSCHHHHHHHHHHSTTEE
T ss_pred CCCCCEEEEEeeCCCCccEEEEeecCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEE
Confidence 45788999999999999999997543 569999999999999999 999999999999999 34789999998888889
Q ss_pred eeeeccC
Q psy4417 80 QFTIAPQ 86 (440)
Q Consensus 80 ~l~v~p~ 86 (440)
.|.+...
T Consensus 82 ~l~v~r~ 88 (102)
T 2d90_A 82 TLLVLDK 88 (102)
T ss_dssp EEEECST
T ss_pred EEEEEEC
Confidence 9998653
No 62
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=99.18 E-value=7.6e-11 Score=97.63 Aligned_cols=84 Identities=24% Similarity=0.380 Sum_probs=71.4
Q ss_pred CCCCeEEEEee-CCCCccEEEEecC----CCcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhc-
Q psy4417 4 PPHPLKKILGT-GLSPCGLTVEQDA----NGNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKS- 75 (440)
Q Consensus 4 ~~~~r~v~l~r-~g~~lGiti~~~~----~~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~- 75 (440)
..+++.|.+.| .+.+|||++.++. ..+++|..|.++|||+++|+|+.||+|++|||+++ .+++++..+|+..
T Consensus 3 ~~~~~~v~l~k~~~~~lG~~i~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~ 82 (108)
T 3cbz_A 3 HMNIITVTLNMEKYNFLGISIVGQSNERGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFENMSNDDAVRVLRDIV 82 (108)
T ss_dssp -CCEEEEEECHHHHCCCCEEEEEECSSTTCCEEEEEEECTTSHHHHHCCCCTTCEEEEETTEETTSCCHHHHHHHHHHHH
T ss_pred CceEEEEEEEeCCCCccCEEEEcCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcc
Confidence 45778899987 4579999999864 25699999999999999999999999999999999 5599999999976
Q ss_pred --CCceeeeeccCC
Q psy4417 76 --DGNIQFTIAPQG 87 (440)
Q Consensus 76 --~~~v~l~v~p~~ 87 (440)
++.+.|+|....
T Consensus 83 ~~~~~v~l~v~R~~ 96 (108)
T 3cbz_A 83 HKPGPIVLTVAKSG 96 (108)
T ss_dssp TSSSCEEEEEECCC
T ss_pred cCCCeEEEEEEeCC
Confidence 567889887643
No 63
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=99.18 E-value=6.7e-11 Score=97.07 Aligned_cols=84 Identities=25% Similarity=0.344 Sum_probs=71.1
Q ss_pred CCCCeEEEEeeCC-CCccEEEEecCC--CcEEEEEEcCCChhhhc-CCCCCCCEEEeECCccC--CCHHHHHHHHHhcCC
Q psy4417 4 PPHPLKKILGTGL-SPCGLTVEQDAN--GNLIIARILAGSLIDKQ-GVLKVGDVILGVNGENV--SSPEDLQIEVVKSDG 77 (440)
Q Consensus 4 ~~~~r~v~l~r~g-~~lGiti~~~~~--~~i~V~~V~~gs~A~~~-G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~~ 77 (440)
+..++.|.+.|.+ .+|||++.++.+ .+++|..|.++|||+++ | |+.||.|++|||.++ .+++++..+|+..++
T Consensus 7 ~~~~~~v~l~~~~~~~lG~~l~~g~~~~~~~~V~~V~~~s~A~~a~g-L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~ 85 (103)
T 2dc2_A 7 VGPIRKVLLLKEDHEGLGISITGGKEHGVPILISEIHPGQPADRCGG-LHVGDAILAVNGVNLRDTKHKEAVTILSQQRG 85 (103)
T ss_dssp --CEEEEEEECCSSSCCCEEEEEEGGGTEEEEEEEECTTSHHHHHTC-CCSSEEEEEETTEESTTSCHHHHHHHHHHCCS
T ss_pred CCCcEEEEEEeCCCCccCEEEEeccCCCCCEEEEEECCCCHHHHhCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 4556778887754 799999998754 35999999999999996 7 999999999999999 679999999999989
Q ss_pred ceeeeeccCCC
Q psy4417 78 NIQFTIAPQGD 88 (440)
Q Consensus 78 ~v~l~v~p~~~ 88 (440)
.+.|++.+...
T Consensus 86 ~v~l~v~~~~~ 96 (103)
T 2dc2_A 86 EIEFEVVYVAL 96 (103)
T ss_dssp EEEEEEEECC-
T ss_pred cEEEEEEecCC
Confidence 99999987653
No 64
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=99.18 E-value=2.7e-10 Score=93.05 Aligned_cols=84 Identities=20% Similarity=0.294 Sum_probs=70.9
Q ss_pred CCCCeEEEEeeC-CCCccEEEEecCCC----cEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHh--
Q psy4417 4 PPHPLKKILGTG-LSPCGLTVEQDANG----NLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVK-- 74 (440)
Q Consensus 4 ~~~~r~v~l~r~-g~~lGiti~~~~~~----~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~-- 74 (440)
+.+.+.+.+.|. +.+|||++.....+ +++|..|.++|||+++|.|+.||+|++|||.++ .+++++..+|+.
T Consensus 7 ~~~~~~v~l~k~~g~~lG~~i~~~~~~~~~~~~~V~~V~~~spA~~~ggl~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~ 86 (101)
T 2yt7_A 7 GDNCREVHLEKRRGEGLGVALVESGWGSLLPTAVIANLLHGGPAERSGALSIGDRLTAINGTSLVGLPLAACQAAVRETK 86 (101)
T ss_dssp TCCCEEEEEECCTTCCCCEEEEECCCSSSSCCEEEEEECTTSTTGGGSSCCTTCEEEEESSCBCTTSCHHHHHHHHHHTT
T ss_pred CCceEEEEEEeCCCCccCEEEEeCCCCCCccCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 566778888764 57999999864333 599999999999999666999999999999999 899999999997
Q ss_pred cCCceeeeeccCC
Q psy4417 75 SDGNIQFTIAPQG 87 (440)
Q Consensus 75 ~~~~v~l~v~p~~ 87 (440)
.++.+.|+|...+
T Consensus 87 ~g~~v~l~v~R~~ 99 (101)
T 2yt7_A 87 SQTSVTLSIVHCP 99 (101)
T ss_dssp TSSEEEEEECCCC
T ss_pred CCCeEEEEEEeCC
Confidence 6788999987644
No 65
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=99.17 E-value=5.9e-11 Score=101.26 Aligned_cols=85 Identities=16% Similarity=0.207 Sum_probs=74.4
Q ss_pred CCCCeEEEEeeCC-CCccEEEEecCCC-----cEEEEEEcCCChhhhcCCCCCCCEEEeECCccCC---CHHHHHHHHHh
Q psy4417 4 PPHPLKKILGTGL-SPCGLTVEQDANG-----NLIIARILAGSLIDKQGVLKVGDVILGVNGENVS---SPEDLQIEVVK 74 (440)
Q Consensus 4 ~~~~r~v~l~r~g-~~lGiti~~~~~~-----~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v~---t~~e~~~~L~~ 74 (440)
.++++.|.+.|+. .+|||+|.++.+. +++|..|.++|||+++|.|+.||+|++|||.++. +++++..+|+.
T Consensus 23 ~~~~~~v~l~k~~~~~lG~~i~g~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~~l~~ 102 (128)
T 2db5_A 23 GRQIEYIDIERPSTGGLGFSVVALRSQNLGKVDIFVKDVQPGSVADRDQRLKENDQILAINHTPLDQNISHQQAIALLQQ 102 (128)
T ss_dssp TCEEEEEEEECCSSSCCCCEEEEEECSSSSCEEEEEECCCTTSHHHHTCCCCSSCBEEEESSCBCSTTSCHHHHHHHHHH
T ss_pred cCceEEEEEEECCCCccCEEEecccCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCCHHHHHHHHHc
Confidence 4667788998876 6999999876542 5999999999999999999999999999999996 99999999999
Q ss_pred cCCceeeeeccCCC
Q psy4417 75 SDGNIQFTIAPQGD 88 (440)
Q Consensus 75 ~~~~v~l~v~p~~~ 88 (440)
.++.+.|.|.....
T Consensus 103 ~~~~v~l~v~r~~~ 116 (128)
T 2db5_A 103 TTGSLRLIVAREPV 116 (128)
T ss_dssp CCSEEEEEEEECCC
T ss_pred CCCeEEEEEEcCCC
Confidence 88999999976543
No 66
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=99.17 E-value=1e-10 Score=99.84 Aligned_cols=84 Identities=25% Similarity=0.431 Sum_probs=74.2
Q ss_pred CCCCeEEEEeeC--CCCccEEEEecCC-----------CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHH
Q psy4417 4 PPHPLKKILGTG--LSPCGLTVEQDAN-----------GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDL 68 (440)
Q Consensus 4 ~~~~r~v~l~r~--g~~lGiti~~~~~-----------~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~ 68 (440)
+..++.|.+.|. +.+|||+|.++.. .+++|..|.++|||+++|+|+.||+|++|||.++ .+++++
T Consensus 27 ~~~~r~v~l~k~~~~~~lG~~i~~~~~~~~~~~g~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~ 106 (128)
T 1nf3_C 27 PETHRRVRLCKYGTEKPLGFYIRDGSSVRVTPHGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQV 106 (128)
T ss_dssp CTTCEEEEECCSSTTSCCCEEEEEEEEEEEETTEEEEEEEEEEEEECTTCHHHHHTCCCTTCEEEEETTEESTTCCHHHH
T ss_pred CCccEEEEEEECCCCCCccEEEEccccccccccccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHH
Confidence 567888999998 5799999987532 3599999999999999998999999999999999 899999
Q ss_pred HHHHHhcCCceeeeeccCC
Q psy4417 69 QIEVVKSDGNIQFTIAPQG 87 (440)
Q Consensus 69 ~~~L~~~~~~v~l~v~p~~ 87 (440)
..+|+..++.+.|+|.+..
T Consensus 107 ~~~l~~~~~~v~l~v~r~~ 125 (128)
T 1nf3_C 107 TDMMIANSRNLIITVRPAN 125 (128)
T ss_dssp HHHHHHTTTSEEEEEECCC
T ss_pred HHHHHcCCCeEEEEEEECC
Confidence 9999988888999998754
No 67
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=99.17 E-value=1.5e-10 Score=96.49 Aligned_cols=82 Identities=17% Similarity=0.281 Sum_probs=72.1
Q ss_pred CCCCeEEEEeeCCCCccEEEEecC--CCcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcCCce
Q psy4417 4 PPHPLKKILGTGLSPCGLTVEQDA--NGNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSDGNI 79 (440)
Q Consensus 4 ~~~~r~v~l~r~g~~lGiti~~~~--~~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~~~v 79 (440)
+.+++.+.+.|++.+|||++.++. ..+++|..|.++|||+++|.|+.||+|++|||.++ .++.++..+++..++.+
T Consensus 22 ~~~~~~v~l~~~~~glG~~l~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~g~~v 101 (112)
T 2r4h_A 22 SMDFYTVELERGAKGFGFSLRGGREYNMDLYVLRLAEDGPAERSGKMRIGDEILEINGETTKNMKHSRAIELIKNGGRRV 101 (112)
T ss_dssp -CCEEEEEEECBTTBTSEEEEECGGGTCCEEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTEE
T ss_pred CCceEEEEEEcCCCccCEEEeccccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 467788999998899999999865 35699999999999999999999999999999999 56899999998888888
Q ss_pred eeeecc
Q psy4417 80 QFTIAP 85 (440)
Q Consensus 80 ~l~v~p 85 (440)
.|.|..
T Consensus 102 ~l~v~R 107 (112)
T 2r4h_A 102 RLFLKR 107 (112)
T ss_dssp EEEEEC
T ss_pred EEEEEe
Confidence 888864
No 68
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=99.17 E-value=7.8e-11 Score=93.94 Aligned_cols=80 Identities=19% Similarity=0.278 Sum_probs=70.0
Q ss_pred CCeEEEEeeCCCCccEEEEecCC--CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcC--Cce
Q psy4417 6 HPLKKILGTGLSPCGLTVEQDAN--GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSD--GNI 79 (440)
Q Consensus 6 ~~r~v~l~r~g~~lGiti~~~~~--~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~--~~v 79 (440)
+++.+.+.|+..+|||++.++.+ .+++|..|.++|||+++|.|+.||.|++|||.++ .+++++..+|+..+ +.+
T Consensus 2 ~~~~v~l~~~~~g~G~~~~~g~~~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~v 81 (90)
T 2q9v_A 2 MEQDIFLWRKETGFGFRILGGNEPGEPIYIGHIVPLGAADTDGRLRSGDELISVDGTPVIGKSHQLVVQLMQQAAKQGHV 81 (90)
T ss_dssp EEEEEEEECBTTBCCEEEEECSSTTSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHHTEE
T ss_pred CcEEEEEEECCCccCEEEEccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeE
Confidence 35789999999999999998643 4599999999999999999999999999999999 78999999998764 378
Q ss_pred eeeecc
Q psy4417 80 QFTIAP 85 (440)
Q Consensus 80 ~l~v~p 85 (440)
.|.|..
T Consensus 82 ~l~v~R 87 (90)
T 2q9v_A 82 NLTVRQ 87 (90)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 888764
No 69
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=99.17 E-value=2e-10 Score=94.62 Aligned_cols=84 Identities=23% Similarity=0.313 Sum_probs=71.6
Q ss_pred CCCCCeEEEEeeCCCCccEEEEecCC--------------CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccCC--CHH
Q psy4417 3 HPPHPLKKILGTGLSPCGLTVEQDAN--------------GNLIIARILAGSLIDKQGVLKVGDVILGVNGENVS--SPE 66 (440)
Q Consensus 3 ~~~~~r~v~l~r~g~~lGiti~~~~~--------------~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v~--t~~ 66 (440)
+...++.|.+.|.+.+|||++.++.+ ..++|..|.++|||+++| |+.||.|++|||.++. +++
T Consensus 3 ~~~~~r~v~l~k~~~g~G~~l~~~~~~~~~~~~~~~~~~~p~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~ 81 (107)
T 3qe1_A 3 HGGSPRVVRIVKSESGYGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAG-VRKGDRILEVNGVNVEGATHK 81 (107)
T ss_dssp ---CCEEEEEECBTTBTCEEEECCSSSCCCCEESSSSEESCCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHH
T ss_pred CCCCcEEEEEEECCCCCCEEEEcccccCCcceeccccccCCceEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHH
Confidence 45678899999999999999988632 114799999999999999 9999999999999994 899
Q ss_pred HHHHHHHhcCCceeeeeccCC
Q psy4417 67 DLQIEVVKSDGNIQFTIAPQG 87 (440)
Q Consensus 67 e~~~~L~~~~~~v~l~v~p~~ 87 (440)
++..+|+..++.+.|++....
T Consensus 82 ~~~~~l~~~g~~v~l~v~r~~ 102 (107)
T 3qe1_A 82 QVVDLIRAGEKELILTVLSVE 102 (107)
T ss_dssp HHHHHHHHCSSEEEEEEECSS
T ss_pred HHHHHHHcCCCEEEEEEEcCC
Confidence 999999988899999987654
No 70
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=99.16 E-value=1.2e-10 Score=92.25 Aligned_cols=79 Identities=27% Similarity=0.422 Sum_probs=68.8
Q ss_pred CCCeEEEEeeC-CCCccEEEEecCC--CcEEEEEEcCCChhhh-cCCCCCCCEEEeECCccC--CCHHHHHHHHHhcCCc
Q psy4417 5 PHPLKKILGTG-LSPCGLTVEQDAN--GNLIIARILAGSLIDK-QGVLKVGDVILGVNGENV--SSPEDLQIEVVKSDGN 78 (440)
Q Consensus 5 ~~~r~v~l~r~-g~~lGiti~~~~~--~~i~V~~V~~gs~A~~-~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~~~ 78 (440)
++++.|.+.|. +.+|||++.++.+ .+++|..|.++|||++ +| |+.||+|++|||.++ .+++++..+++..++.
T Consensus 1 g~~~~v~l~~~~~~~lG~~i~~~~~~~~~~~V~~V~~gspA~~~ag-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~ 79 (87)
T 4e34_A 1 GPIRKVLLLKEDHEGLGISITGGKEHGVPILISEIHPGQPADRCGG-LHVGDAILAVNGVNLRDTKHKEAVTILSQQRGE 79 (87)
T ss_dssp CCCEEEEEECCTTBCCCEEEEEEGGGTEEEEEEEECTTSHHHHHSC-CCTTEEEEEETTEECTTCCHHHHHHHHHHCCSE
T ss_pred CCEEEEEEEECCCCcccEEEEccCCCCCCEEEEEECCCCHHHhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 36788999986 5699999998643 3499999999999999 57 999999999999999 7889999999988888
Q ss_pred eeeeec
Q psy4417 79 IQFTIA 84 (440)
Q Consensus 79 v~l~v~ 84 (440)
+.|+|.
T Consensus 80 v~l~v~ 85 (87)
T 4e34_A 80 IEFEVV 85 (87)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 888775
No 71
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=99.16 E-value=1.2e-10 Score=93.23 Aligned_cols=80 Identities=18% Similarity=0.180 Sum_probs=70.1
Q ss_pred CCCeEEEEeeCCCCccEEEEecCCCcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcCCceeee
Q psy4417 5 PHPLKKILGTGLSPCGLTVEQDANGNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSDGNIQFT 82 (440)
Q Consensus 5 ~~~r~v~l~r~g~~lGiti~~~~~~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~~~v~l~ 82 (440)
..+|.|.+.|+..++||++.+. .+++|..|.++|||+++| |+.||.|++|||.++ .++.++..+++..++.+.|.
T Consensus 2 ~~~r~v~l~~~~~g~G~~l~~~--~~~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~ 78 (91)
T 2f5y_A 2 MRYRQITIPRGKDGFGFTICCD--SPVRVQAVDSGGPAERAG-LQQLDTVLQLNERPVEHWKCVELAHEIRSCPSEIILL 78 (91)
T ss_dssp CEEEEEEEECBTTBTSEEEECS--SSCEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEE
T ss_pred CceEEEEEEeCCCCccEEEecC--CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEE
Confidence 4578899999999999999863 459999999999999999 999999999999999 47899999998877888888
Q ss_pred eccCC
Q psy4417 83 IAPQG 87 (440)
Q Consensus 83 v~p~~ 87 (440)
+....
T Consensus 79 v~R~~ 83 (91)
T 2f5y_A 79 VWRMV 83 (91)
T ss_dssp EEECC
T ss_pred EEeCC
Confidence 87543
No 72
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=99.16 E-value=1.3e-10 Score=92.73 Aligned_cols=81 Identities=20% Similarity=0.355 Sum_probs=69.7
Q ss_pred CCCeEEEEee-CCCCccEEEEecCC--CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcCCce
Q psy4417 5 PHPLKKILGT-GLSPCGLTVEQDAN--GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSDGNI 79 (440)
Q Consensus 5 ~~~r~v~l~r-~g~~lGiti~~~~~--~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~~~v 79 (440)
.+++.|.+.| .+.+|||++.++.+ .+++|..|.++|||+++|.|+.||+|++|||.++ .++.++..+++..++.+
T Consensus 3 ~~~~~v~l~k~~~~~lG~~i~~~~~~~~g~~V~~V~~~spA~~aggl~~GD~I~~ing~~v~~~~~~~~~~~~~~~~~~v 82 (90)
T 1qav_A 3 LQRRRVTVRKADAGGLGISIKGGRENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEV 82 (90)
T ss_dssp SSCEEEEEECCTTTCCCEEEEEEGGGTEEEEEEEECTTSHHHHTTCCCTTEEEEEETTEECTTCCHHHHHHHHHTCCSEE
T ss_pred CccEEEEEEeCCCCCcCEEEEcccCCCCCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeE
Confidence 5678899998 56899999998644 4599999999999999933999999999999999 57899999999888888
Q ss_pred eeeecc
Q psy4417 80 QFTIAP 85 (440)
Q Consensus 80 ~l~v~p 85 (440)
.|.+..
T Consensus 83 ~l~v~r 88 (90)
T 1qav_A 83 VLEVKY 88 (90)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 888753
No 73
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.16 E-value=1.1e-10 Score=96.40 Aligned_cols=83 Identities=17% Similarity=0.294 Sum_probs=72.1
Q ss_pred CCCeEEEEeeCCCCccEEEEe---cC-----CCcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHh
Q psy4417 5 PHPLKKILGTGLSPCGLTVEQ---DA-----NGNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVK 74 (440)
Q Consensus 5 ~~~r~v~l~r~g~~lGiti~~---~~-----~~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~ 74 (440)
.+.+.|.+.+.+.+|||++.+ +. ..+++|..|.++|||+++|.|+.||+|++|||.++ .++.++..+++.
T Consensus 8 ~~~~~v~l~k~~~glG~~i~~~~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~ 87 (107)
T 1wf8_A 8 LELFPVELEKDEDGLGISIIGMGVGADAGLEKLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVLRN 87 (107)
T ss_dssp EEEEEEEEECBTTBSCEEEEEEEESCCTTCCEEEEEEEEECTTCHHHHHCSSCTTCBEEEETTEECBSCCHHHHHHHHHH
T ss_pred ceEEEEEEEECCCcccEEEEecCCCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhc
Confidence 445678888999999999998 22 24599999999999999999999999999999999 589999999998
Q ss_pred cCCceeeeeccCC
Q psy4417 75 SDGNIQFTIAPQG 87 (440)
Q Consensus 75 ~~~~v~l~v~p~~ 87 (440)
.++.+.|.|....
T Consensus 88 ~~~~v~l~v~R~~ 100 (107)
T 1wf8_A 88 TKGNVRFVIGREK 100 (107)
T ss_dssp CCSEEEEEEEEEC
T ss_pred CCCeEEEEEEeCC
Confidence 8899999987654
No 74
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.16 E-value=2.1e-10 Score=96.13 Aligned_cols=84 Identities=19% Similarity=0.270 Sum_probs=73.7
Q ss_pred CCCeEEEEeeC-CCCccEEEEecCC-----------CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHH
Q psy4417 5 PHPLKKILGTG-LSPCGLTVEQDAN-----------GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQI 70 (440)
Q Consensus 5 ~~~r~v~l~r~-g~~lGiti~~~~~-----------~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~ 70 (440)
..++.|.+.|. +.+|||+|.++.+ .+++|..|.++|||+++|.|+.||+|++|||.++ .++.++..
T Consensus 14 ~~~~~v~l~k~~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~ 93 (117)
T 2ehr_A 14 GPPRIVEIFREPNVSLGISIVGGQTVIKRLKNGEELKGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQNASHSEAVE 93 (117)
T ss_dssp CCCEEEEECCCSSSCCCEEECCCCSCCCSSCCCSCCCSEEEEEECSSSTTTSSCSCCTTCEEEEESSCBCTTCCHHHHHH
T ss_pred CCCEEEEEEeCCCCccCEEEeCCcccccccccCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 56788999987 5899999988653 4699999999999999999999999999999999 67999999
Q ss_pred HHHhcCCceeeeeccCCC
Q psy4417 71 EVVKSDGNIQFTIAPQGD 88 (440)
Q Consensus 71 ~L~~~~~~v~l~v~p~~~ 88 (440)
+++..++.+.|.|.....
T Consensus 94 ~~~~~g~~v~l~v~r~~~ 111 (117)
T 2ehr_A 94 AIKNAGNPVVFIVQSLSS 111 (117)
T ss_dssp HHHTSCSSEEEEECCBSC
T ss_pred HHHcCCCeEEEEEEECCC
Confidence 999888999998876543
No 75
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=99.16 E-value=1.2e-10 Score=94.13 Aligned_cols=81 Identities=17% Similarity=0.277 Sum_probs=71.2
Q ss_pred CeEEEEeeCCCCccEEEEecCC------CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccCCC--HHHHHHHHHhcCCc
Q psy4417 7 PLKKILGTGLSPCGLTVEQDAN------GNLIIARILAGSLIDKQGVLKVGDVILGVNGENVSS--PEDLQIEVVKSDGN 78 (440)
Q Consensus 7 ~r~v~l~r~g~~lGiti~~~~~------~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v~t--~~e~~~~L~~~~~~ 78 (440)
...|.+.|++.+|||++.++.+ .+++|..|.++|||+++|.|+.||.|++|||.++.+ ++++..+|+..++.
T Consensus 4 ~~~v~l~k~~~~lG~~i~~~~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~ 83 (97)
T 2jil_A 4 TVEVTLHKEGNTFGFVIRGGAHDDRNKSRPVVITSVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQCGQE 83 (97)
T ss_dssp EEEEEEECBTTBCSEEEEEECCSCC--CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHHSCSE
T ss_pred EEEEEEEeCCCccCEEEeCcccCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 4578888988999999998742 459999999999999999999999999999999954 99999999988888
Q ss_pred eeeeeccCC
Q psy4417 79 IQFTIAPQG 87 (440)
Q Consensus 79 v~l~v~p~~ 87 (440)
+.|.|....
T Consensus 84 v~l~v~R~~ 92 (97)
T 2jil_A 84 AALLIEYDV 92 (97)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEeCC
Confidence 999887644
No 76
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.16 E-value=8.4e-11 Score=97.70 Aligned_cols=86 Identities=13% Similarity=0.199 Sum_probs=74.7
Q ss_pred CCCCCeEEEEeeCC-CCccEEEEecCC-----------CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHH
Q psy4417 3 HPPHPLKKILGTGL-SPCGLTVEQDAN-----------GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDL 68 (440)
Q Consensus 3 ~~~~~r~v~l~r~g-~~lGiti~~~~~-----------~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~ 68 (440)
.|+..+.|.+.|.. .+|||+|.++.+ .+++|..|.++|||+++|+|+.||+|++|||.++ .++.++
T Consensus 6 ~~~~~~~v~l~k~~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~ 85 (111)
T 1uju_A 6 SGPGLRELCIQKAPGERLGISIRGGARGHAGNPRDPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGEA 85 (111)
T ss_dssp CSCSSSCEEEECCTTCCCCEEEECCSSSSCSCSSCTTCCCCEEEEECTTSHHHHHSSCCTTCBCCBBSSCBCTTSCHHHH
T ss_pred CCCccEEEEEEECCCCccCEEEECCccccccccccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHH
Confidence 36778889998875 899999998652 3589999999999999999999999999999999 489999
Q ss_pred HHHHHhcCCceeeeeccCCC
Q psy4417 69 QIEVVKSDGNIQFTIAPQGD 88 (440)
Q Consensus 69 ~~~L~~~~~~v~l~v~p~~~ 88 (440)
..+++..+..+.|.|.....
T Consensus 86 ~~~l~~~g~~v~l~v~r~~~ 105 (111)
T 1uju_A 86 VQLLRSVGDTLTVLVCDGFE 105 (111)
T ss_dssp HHHHSSCSSEEEECCCCCCC
T ss_pred HHHHHcCCCeEEEEEEECCC
Confidence 99999888889998876553
No 77
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.15 E-value=7.1e-11 Score=101.18 Aligned_cols=82 Identities=17% Similarity=0.204 Sum_probs=70.5
Q ss_pred CCCeEEEEeeCCCCccEEEEecCC-----CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcCC
Q psy4417 5 PHPLKKILGTGLSPCGLTVEQDAN-----GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSDG 77 (440)
Q Consensus 5 ~~~r~v~l~r~g~~lGiti~~~~~-----~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~~ 77 (440)
.+.+.|.+.|.+.+|||+|.++.+ .+++|..|.++|||+++|.|+.||+|++|||.++ .+++++..+|+..++
T Consensus 28 ~~~~~v~l~k~~~glG~~i~gg~~~~~~~~~i~I~~V~~gs~A~~aggL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~ 107 (130)
T 1i16_A 28 ATVCTVTLEKMSAGLGFSLEGGKGSLHGDKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKALPD 107 (130)
T ss_dssp EEEEEEEEETTSSSTTEEEECCCCCSSSCCCCEEEEECSSCCCSSSCCCCTTCCEEECSSCBGGGSCHHHHHHHHHTSCS
T ss_pred CcEEEEEEEcCCCccCEEEecCcCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 456778888988999999998754 3599999999999999944999999999999999 679999999998754
Q ss_pred -ceeeeeccC
Q psy4417 78 -NIQFTIAPQ 86 (440)
Q Consensus 78 -~v~l~v~p~ 86 (440)
.+.|+|...
T Consensus 108 ~~v~l~v~r~ 117 (130)
T 1i16_A 108 GPVTIVIRRK 117 (130)
T ss_dssp SEEEEEEEEE
T ss_pred ceEEEEEEeC
Confidence 588888654
No 78
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=99.15 E-value=2.2e-10 Score=91.69 Aligned_cols=81 Identities=27% Similarity=0.369 Sum_probs=70.4
Q ss_pred CCeEEEEeeC-CCCccEEEEecCC-CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcCCceee
Q psy4417 6 HPLKKILGTG-LSPCGLTVEQDAN-GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSDGNIQF 81 (440)
Q Consensus 6 ~~r~v~l~r~-g~~lGiti~~~~~-~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~~~v~l 81 (440)
+...|.+.|. +.+|||++.++.+ .+++|..|.++|||+++|.|+.||.|++|||.++ .+++++..+++..++.+.|
T Consensus 4 ~~~~v~l~k~~~~~lG~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l 83 (92)
T 2qg1_A 4 DTLTIGLQKKPGKGLGLSIVGKRNDTGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRNATQEAVAALLKCSLGTVTL 83 (92)
T ss_dssp CEEEEEEECCTTSCCSEEEECCSSSCSCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEEE
T ss_pred eEEEEEEEeCCCCcccEEEEeccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEE
Confidence 4567888875 6899999998654 5799999999999999999999999999999999 5689999999888888998
Q ss_pred eeccC
Q psy4417 82 TIAPQ 86 (440)
Q Consensus 82 ~v~p~ 86 (440)
.|...
T Consensus 84 ~v~R~ 88 (92)
T 2qg1_A 84 EVGRI 88 (92)
T ss_dssp EEECC
T ss_pred EEEcc
Confidence 88654
No 79
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.15 E-value=1.8e-10 Score=97.71 Aligned_cols=85 Identities=13% Similarity=0.224 Sum_probs=75.1
Q ss_pred CCCCCeEEEEeeCCCCccEEEEecCC---CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcCC
Q psy4417 3 HPPHPLKKILGTGLSPCGLTVEQDAN---GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSDG 77 (440)
Q Consensus 3 ~~~~~r~v~l~r~g~~lGiti~~~~~---~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~~ 77 (440)
.+.+.+.|.+.|+..+|||++.++.+ .+++|..|.++|||+++|.|+.||+|++|||.++ .++.++..+++..++
T Consensus 22 ~~~~~~~v~l~k~~~glG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~~ 101 (124)
T 2daz_A 22 LPGELHIIELEKDKNGLGLSLAGNKDRSRMSIFVVGINPEGPAAADGRMRIGDELLEINNQILYGRSHQNASAIIKTAPS 101 (124)
T ss_dssp SSSEEEEEEEECCSSCCCEEEECBSSTTSCCEEEEEECTTSHHHHHTCCCTTCEECEESSCBCTTSCHHHHHHHHHHSCS
T ss_pred CCCceEEEEEEeCCCccCEEEeccCCCCcCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 45677889999999999999998754 4699999999999999999999999999999999 679999999988888
Q ss_pred ceeeeeccCC
Q psy4417 78 NIQFTIAPQG 87 (440)
Q Consensus 78 ~v~l~v~p~~ 87 (440)
.+.|+|....
T Consensus 102 ~v~l~v~R~~ 111 (124)
T 2daz_A 102 KVKLVFIRNE 111 (124)
T ss_dssp EEEEEEEECT
T ss_pred eEEEEEEeCC
Confidence 8999887643
No 80
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.15 E-value=2.5e-10 Score=93.69 Aligned_cols=82 Identities=16% Similarity=0.197 Sum_probs=71.8
Q ss_pred CCCCeEEEEeeCC-CCccEEEEecCC--CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccCC--CHHHHHHHHHhcCCc
Q psy4417 4 PPHPLKKILGTGL-SPCGLTVEQDAN--GNLIIARILAGSLIDKQGVLKVGDVILGVNGENVS--SPEDLQIEVVKSDGN 78 (440)
Q Consensus 4 ~~~~r~v~l~r~g-~~lGiti~~~~~--~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v~--t~~e~~~~L~~~~~~ 78 (440)
+..++.|.+.|.. ..|||++.++.+ .+++|..|.++|||+++| |+.||+|++|||..+. +++++..+|+. ++.
T Consensus 13 ~~~~~~v~l~k~~~~~lG~~~~~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~-~~~ 90 (104)
T 1wi2_A 13 QFLPRIVTLKKPPGAQLGFNIRGGKASQLGIFISKVIPDSDAHRAG-LQEGDQVLAVNDVDFQDIEHSKAVEILKT-ARE 90 (104)
T ss_dssp SSCCEEEEECCCTTCCCSEEEECCSSSCCCCEEEEECTTSHHHHHT-CCTTCEEEEETTEECSSCCHHHHHHHHHH-SSS
T ss_pred CCCCEEEEEEeCCCCCccEEEEcccCCCCCEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhC-CCE
Confidence 4668899999876 799999998654 469999999999999999 9999999999999994 49999999988 788
Q ss_pred eeeeeccCC
Q psy4417 79 IQFTIAPQG 87 (440)
Q Consensus 79 v~l~v~p~~ 87 (440)
+.|+|...+
T Consensus 91 v~l~v~r~~ 99 (104)
T 1wi2_A 91 ISMRVRFFS 99 (104)
T ss_dssp EEEEEECCC
T ss_pred EEEEEEECC
Confidence 899887654
No 81
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.14 E-value=3.3e-10 Score=93.86 Aligned_cols=84 Identities=24% Similarity=0.277 Sum_probs=74.0
Q ss_pred CCCCCeEEEEeeCCCCccEEEEecCC-----CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhc
Q psy4417 3 HPPHPLKKILGTGLSPCGLTVEQDAN-----GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKS 75 (440)
Q Consensus 3 ~~~~~r~v~l~r~g~~lGiti~~~~~-----~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~ 75 (440)
.+.+.+.|.+.|+..+|||++.++.+ .+++|..|.++|||+++|.|+.||.|++|||.++ .++.++..+++..
T Consensus 5 ~~~~~~~v~l~~~~~glG~~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 84 (110)
T 1um1_A 5 SSGYVFTVELERGPSGLGMGLIDGMHTHLGAPGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLGLGYLRAVDLIRHG 84 (110)
T ss_dssp SCCCEEEEEEECCTTCCCEEEEETTTSTTCCSSEEEEEECTTSHHHHHSCCCTTCEEEEESSCBCSSCCHHHHHHHHHTC
T ss_pred CCCcEEEEEEEECCCccCEEEeCCcCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 35677788898988999999998643 4599999999999999999999999999999999 5799999999988
Q ss_pred CCceeeeeccC
Q psy4417 76 DGNIQFTIAPQ 86 (440)
Q Consensus 76 ~~~v~l~v~p~ 86 (440)
++.+.|.|...
T Consensus 85 ~~~v~l~v~R~ 95 (110)
T 1um1_A 85 GKKMRFLVAKS 95 (110)
T ss_dssp CSEEEEEEECC
T ss_pred CCeEEEEEEeC
Confidence 88899988754
No 82
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=99.14 E-value=2.1e-10 Score=94.39 Aligned_cols=83 Identities=22% Similarity=0.375 Sum_probs=70.4
Q ss_pred CCCCeEEEEeeCCCCccEEEEecC-----CCcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcC
Q psy4417 4 PPHPLKKILGTGLSPCGLTVEQDA-----NGNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSD 76 (440)
Q Consensus 4 ~~~~r~v~l~r~g~~lGiti~~~~-----~~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~ 76 (440)
.++...+.+ +++.+|||++.++. ..+++|..|.++|||+++|+|+.||+|++|||.++ .++.++..+++..+
T Consensus 9 ~~~~~~v~l-~~~~glG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~~~~~g 87 (106)
T 3axa_A 9 EPEIITVTL-KKQNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTS 87 (106)
T ss_dssp -CCEEEEEE-ECSSSCSEEEEEEECSSCSSEEEEEEEEBTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCC
T ss_pred CceEEEEEE-CCCCccCEEEEeecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 345556666 88889999998742 24599999999999999999999999999999999 57999999998888
Q ss_pred CceeeeeccCC
Q psy4417 77 GNIQFTIAPQG 87 (440)
Q Consensus 77 ~~v~l~v~p~~ 87 (440)
+.+.|.|....
T Consensus 88 ~~v~l~v~R~~ 98 (106)
T 3axa_A 88 SVVTLEVAKQG 98 (106)
T ss_dssp SEEEEEEECCC
T ss_pred CeEEEEEEeCC
Confidence 89999987643
No 83
>2csi_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.14 E-value=2.9e-11 Score=93.73 Aligned_cols=63 Identities=38% Similarity=0.587 Sum_probs=56.1
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCC-CceEEEecCCCCCCccccchhHHH
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDP-NWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~-~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
...+++|+|+|.+..++.+||.+.+|+|++||+++|+++.+. +||.++. ++..|+||++|++.
T Consensus 6 ~~~~~~Al~dy~~~~~~~~~~~~~eLsf~~Gd~i~v~~~~~~~gWw~g~~---~g~~G~~P~~yv~~ 69 (76)
T 2csi_A 6 SGRRMVALYDYDPRESSPNVDVEAELTFCTGDIITVFGEIDEDGFYYGEL---NGQKGLVPSNFLEE 69 (76)
T ss_dssp CSEEEECSSCCCTTTTSCSSSTTTSCCCCTTCEEEEESSCCSSSEEEEEE---TTEEEEEEGGGCCB
T ss_pred CccEEEEcccCCCCCcccCCCCCCcccCCCCCEEEEeEecCCCCeEEEEE---CCcEEEEehHHEEE
Confidence 456789999999999999999999999999999999998764 7999987 47899999999864
No 84
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.14 E-value=2e-10 Score=94.34 Aligned_cols=82 Identities=24% Similarity=0.295 Sum_probs=69.8
Q ss_pred CCCeEEEEeeCCCCccEEEEecCCC--c-EEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhc----
Q psy4417 5 PHPLKKILGTGLSPCGLTVEQDANG--N-LIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKS---- 75 (440)
Q Consensus 5 ~~~r~v~l~r~g~~lGiti~~~~~~--~-i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~---- 75 (440)
...+.|.++|.+.+|||+|.++.+. . ++|..|.+++||+++|+|+.||+|++|||.++ .+++++..+|+.+
T Consensus 5 ~~~~~v~l~k~~~glG~~i~gg~~~~~~~~~I~~v~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~ 84 (103)
T 1ufx_A 5 SSGTLVRVKKSAATLGIAIEGGANTRQPLPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAARIIAEAFKTK 84 (103)
T ss_dssp SSSEEEEEECCSSSCCEEEECBTTSSCSSCEEEEECTTSHHHHHCSSCTTCBCCEETTEECTTCBHHHHHHHHHHHHHCS
T ss_pred CceEEEEEEcCCCcCCeEEECCCCCCCCcEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhcccC
Confidence 3456788888889999999987653 3 59999999999999999999999999999999 6799999999864
Q ss_pred -CCceeeeeccC
Q psy4417 76 -DGNIQFTIAPQ 86 (440)
Q Consensus 76 -~~~v~l~v~p~ 86 (440)
++.+.|.+...
T Consensus 85 ~~~~i~l~v~r~ 96 (103)
T 1ufx_A 85 DRDYIDFLVTEF 96 (103)
T ss_dssp SCSEEEEEECCC
T ss_pred CCCeEEEEEEEc
Confidence 56677777654
No 85
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=99.14 E-value=3.9e-10 Score=96.34 Aligned_cols=84 Identities=17% Similarity=0.180 Sum_probs=72.9
Q ss_pred CCCCeEEEEeeCCCCccEEEEecCC--CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhc--CC
Q psy4417 4 PPHPLKKILGTGLSPCGLTVEQDAN--GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKS--DG 77 (440)
Q Consensus 4 ~~~~r~v~l~r~g~~lGiti~~~~~--~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~--~~ 77 (440)
..+...+.+.|++.+|||++.++.. .+++|..|.++|+|+++|.|+.||.|++|||.++ .+++++..+|+.. ++
T Consensus 16 ~g~~~~v~l~~~~~g~G~~i~g~~~~~~~v~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~~~g~ 95 (129)
T 2kpk_A 16 KGKFIHTKLRKSSRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGA 95 (129)
T ss_dssp CSEEEEEEEEECSSCCSEEEEEEEETTEEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTSCHHHHHHHHHHSCTTE
T ss_pred CCcEEEEEEEECCCcccEEEeCccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCC
Confidence 4556678899999999999998543 3499999999999999999999999999999999 4799999999976 67
Q ss_pred ceeeeeccCC
Q psy4417 78 NIQFTIAPQG 87 (440)
Q Consensus 78 ~v~l~v~p~~ 87 (440)
.+.|.|....
T Consensus 96 ~v~l~v~R~~ 105 (129)
T 2kpk_A 96 SVDLELCRGY 105 (129)
T ss_dssp EEEEEEEECS
T ss_pred eEEEEEEeCC
Confidence 7899987654
No 86
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.14 E-value=3.6e-10 Score=95.76 Aligned_cols=84 Identities=15% Similarity=0.173 Sum_probs=72.6
Q ss_pred CCCCeEEEEeeCCCCccEEEEecCC--CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHh--cCC
Q psy4417 4 PPHPLKKILGTGLSPCGLTVEQDAN--GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVK--SDG 77 (440)
Q Consensus 4 ~~~~r~v~l~r~g~~lGiti~~~~~--~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~--~~~ 77 (440)
..+.+.|.+.|+..+|||++.++.. .+++|..|.++|||+++|.|+.||+|++|||+.+ .+++++..+|+. .++
T Consensus 17 ~~~~~~v~l~~~~~glG~~~~~g~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~ 96 (123)
T 1ueq_A 17 KGTFLSTTLKKSNMGFGFTIIGGDEPDEFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHTHADVVKLFQSVPIGQ 96 (123)
T ss_dssp CSEEEEEEEECCTTSCSEEEECCSSSSCCCEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTSCHHHHHHHHHTSCTTC
T ss_pred CCcEEEEEEEeCCCceeEEEecccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCC
Confidence 3455678888999999999997653 4599999999999999999999999999999999 489999999997 468
Q ss_pred ceeeeeccCC
Q psy4417 78 NIQFTIAPQG 87 (440)
Q Consensus 78 ~v~l~v~p~~ 87 (440)
.+.|.|....
T Consensus 97 ~v~l~v~R~~ 106 (123)
T 1ueq_A 97 SVNLVLCRGY 106 (123)
T ss_dssp EEEEEEEESC
T ss_pred eEEEEEEeCC
Confidence 8999987654
No 87
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.13 E-value=7.9e-11 Score=96.55 Aligned_cols=83 Identities=19% Similarity=0.240 Sum_probs=71.7
Q ss_pred CCeEEEEeeCCCCccEEEEecCC--CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhc--CCce
Q psy4417 6 HPLKKILGTGLSPCGLTVEQDAN--GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKS--DGNI 79 (440)
Q Consensus 6 ~~r~v~l~r~g~~lGiti~~~~~--~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~--~~~v 79 (440)
+.+.+.+.|...+|||++.++.+ .+++|..|.++|||+++|.|+.||+|++|||.++ .+++++..+|+.. ++.+
T Consensus 9 ~~~~v~l~~~~~g~G~~i~~g~~~~~~~~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~~v 88 (103)
T 1uep_A 9 KELDVHLRRMESGFGFRILGGDEPGQPILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAGKTHRYVIDLMHHAARNGQV 88 (103)
T ss_dssp EEECCEEESSSSSCCEEECCCCSTTSCCBEEEECTTSTTGGGTCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHHTEE
T ss_pred eEEEEEEEeCCCccCEEEeeecCCCCCeEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCcE
Confidence 34567788888999999998543 5699999999999999999999999999999999 6799999999876 7889
Q ss_pred eeeeccCCC
Q psy4417 80 QFTIAPQGD 88 (440)
Q Consensus 80 ~l~v~p~~~ 88 (440)
.|+|.....
T Consensus 89 ~l~v~R~~~ 97 (103)
T 1uep_A 89 NLTVRRKVL 97 (103)
T ss_dssp EEEEEEECC
T ss_pred EEEEEeCCC
Confidence 999976543
No 88
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=99.13 E-value=2.8e-10 Score=91.71 Aligned_cols=81 Identities=23% Similarity=0.368 Sum_probs=69.9
Q ss_pred CCeEEEEeeC--CCCccEEEEecCC-CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcCCcee
Q psy4417 6 HPLKKILGTG--LSPCGLTVEQDAN-GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSDGNIQ 80 (440)
Q Consensus 6 ~~r~v~l~r~--g~~lGiti~~~~~-~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~~~v~ 80 (440)
+...|.+.|. +.+|||++.++.+ .+++|..|.++|||+++|.|+.||.|++|||.++ .++.++...++..++.+.
T Consensus 3 ~~~~v~l~k~~~~~~lG~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~ 82 (95)
T 2vwr_A 3 EILQVALHKRDSGEQLGIKLVRRTDEPGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKYGTPELAAQIIQASGERVN 82 (95)
T ss_dssp EEEEEEEECSSTTCCCCEEEEECSSSCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEE
T ss_pred EEEEEEEEECCCCCcccEEEEeccCCCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEE
Confidence 3567888874 4689999987654 5699999999999999999999999999999999 568889998988889999
Q ss_pred eeeccC
Q psy4417 81 FTIAPQ 86 (440)
Q Consensus 81 l~v~p~ 86 (440)
|.+...
T Consensus 83 l~v~R~ 88 (95)
T 2vwr_A 83 LTIARP 88 (95)
T ss_dssp EEEEEE
T ss_pred EEEEcC
Confidence 988754
No 89
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.12 E-value=1.2e-10 Score=95.86 Aligned_cols=84 Identities=21% Similarity=0.305 Sum_probs=73.6
Q ss_pred CCCCCeEEEEeeCCCCccEEEEecCC-CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcCCce
Q psy4417 3 HPPHPLKKILGTGLSPCGLTVEQDAN-GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSDGNI 79 (440)
Q Consensus 3 ~~~~~r~v~l~r~g~~lGiti~~~~~-~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~~~v 79 (440)
..+.+|.|.+.|++.+|||++.+... .+++|..|.++|||+++| |+.||.|++|||.++ .++.++..+++..++.+
T Consensus 5 ~~~~~r~v~l~k~~~~~G~~l~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v 83 (106)
T 2eei_A 5 SSGQPRLCYLVKEGGSYGFSLKTVQGKKGVYMTDITPQGVAMRAG-VLADDHLIEVNGENVEDASHEEVVEKVKKSGSRV 83 (106)
T ss_dssp CCSSSEEEEEECCSSSCSCCEECCSSCCSCEECCCCTTSHHHHHT-CCSSEEEEEETTEECTTCCHHHHHHHHHHHCSEE
T ss_pred CCCCCEEEEEEECCCCCCEEEEeccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeE
Confidence 45788999999999999999987543 569999999999999999 999999999999999 57899999998888888
Q ss_pred eeeeccCC
Q psy4417 80 QFTIAPQG 87 (440)
Q Consensus 80 ~l~v~p~~ 87 (440)
.|.+....
T Consensus 84 ~l~v~r~~ 91 (106)
T 2eei_A 84 MFLLVDKE 91 (106)
T ss_dssp EEEECCTT
T ss_pred EEEEEcCc
Confidence 88887543
No 90
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=99.12 E-value=3.7e-10 Score=90.13 Aligned_cols=81 Identities=20% Similarity=0.135 Sum_probs=68.4
Q ss_pred CCCCeEEEEeeCC--CCccEEEEecCC-CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcCCc
Q psy4417 4 PPHPLKKILGTGL--SPCGLTVEQDAN-GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSDGN 78 (440)
Q Consensus 4 ~~~~r~v~l~r~g--~~lGiti~~~~~-~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~~~ 78 (440)
|.+.+.|.+.|.+ .+|||++.++.. .+++|..|.++|||+++| |+.||.|++|||.++ .++.++..+++..++.
T Consensus 4 ~~~~~~v~l~k~~~~~~~G~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~ 82 (91)
T 1m5z_A 4 PVELHKVTLYKDSGMEDFGFSVADGLLEKGVYVKNIRPAGPGDLGG-LKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNK 82 (91)
T ss_dssp CCEEEEEEEECCTTCSSSSEEEEECTTSSCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTSTTE
T ss_pred CcceEEEEEEECCCCCCccEEEEeccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCE
Confidence 4567788888864 489999998654 579999999999999999 999999999999999 4577888888877888
Q ss_pred eeeeecc
Q psy4417 79 IQFTIAP 85 (440)
Q Consensus 79 v~l~v~p 85 (440)
+.|.|..
T Consensus 83 v~l~v~R 89 (91)
T 1m5z_A 83 LDLVISR 89 (91)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 8888754
No 91
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=99.12 E-value=3.9e-10 Score=88.85 Aligned_cols=77 Identities=18% Similarity=0.245 Sum_probs=66.8
Q ss_pred eEEEEeeCCCCccEEEEecCC--CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhc--CCceee
Q psy4417 8 LKKILGTGLSPCGLTVEQDAN--GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKS--DGNIQF 81 (440)
Q Consensus 8 r~v~l~r~g~~lGiti~~~~~--~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~--~~~v~l 81 (440)
.++.+.|+..+|||++.++.. .+++|..|.++|||+++|.|+.||.|++|||.++ .+++++..+|+.. ++.+.|
T Consensus 2 ~~v~l~k~~~g~G~~i~~~~~~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l 81 (85)
T 2i04_A 2 IHTKLRKSSRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDL 81 (85)
T ss_dssp EEEEEECBTTBSSEEEEECCSTTBCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSCTTCEEEE
T ss_pred EEEEEEECCCCCCEEEEcccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEE
Confidence 468888999999999998544 3499999999999999999999999999999999 4789999999876 677777
Q ss_pred eec
Q psy4417 82 TIA 84 (440)
Q Consensus 82 ~v~ 84 (440)
.+.
T Consensus 82 ~v~ 84 (85)
T 2i04_A 82 ELC 84 (85)
T ss_dssp EEE
T ss_pred EEE
Confidence 763
No 92
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.12 E-value=1.7e-10 Score=97.29 Aligned_cols=83 Identities=19% Similarity=0.233 Sum_probs=73.0
Q ss_pred CCCeEEEEeeCCCCccEEEEecCC-------CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhc
Q psy4417 5 PHPLKKILGTGLSPCGLTVEQDAN-------GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKS 75 (440)
Q Consensus 5 ~~~r~v~l~r~g~~lGiti~~~~~-------~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~ 75 (440)
..++.|.+.|.+.+|||+|.++.+ .+++|..|.++|||+++|.|+.||+|++|||.++ .++.++..+++..
T Consensus 16 ~~~~~v~l~r~~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~ 95 (120)
T 2eno_A 16 VTEEEINLTRGPSGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNA 95 (120)
T ss_dssp EEEEEEEEECCSSSCSEEEECCTTTCSSSSCCSEEEEEECSSSHHHHSCCSCTTCEEEEETTEECCSCCHHHHHHHHHHH
T ss_pred CceEEEEEEECCCCCCEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 467789999999999999998643 4699999999999999999999999999999999 5688999999988
Q ss_pred CCceeeeeccCC
Q psy4417 76 DGNIQFTIAPQG 87 (440)
Q Consensus 76 ~~~v~l~v~p~~ 87 (440)
+..+.|.|....
T Consensus 96 g~~v~l~v~R~~ 107 (120)
T 2eno_A 96 GYAVSLRVQHRL 107 (120)
T ss_dssp CSEEEEEEEEEE
T ss_pred CCeEEEEEEeCC
Confidence 888999887543
No 93
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=99.12 E-value=4.8e-10 Score=90.04 Aligned_cols=81 Identities=25% Similarity=0.284 Sum_probs=69.3
Q ss_pred CCCCCeEEEEeeCCCCccEEEEecCCCcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcCCcee
Q psy4417 3 HPPHPLKKILGTGLSPCGLTVEQDANGNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSDGNIQ 80 (440)
Q Consensus 3 ~~~~~r~v~l~r~g~~lGiti~~~~~~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~~~v~ 80 (440)
.+..+|.|++.|++.+|||++.++ .+++|..|.++|||+++| |+.||.|++|||.++ .++.++...++ .++.+.
T Consensus 5 ~~~~~r~v~l~~~~~~~G~~l~~~--~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~-~g~~v~ 80 (93)
T 2dls_A 5 SSGVQRCVIIQKDQHGFGFTVSGD--RIVLVQSVRPGGAAMKAG-VKEGDRIIKVNGTMVTNSSHLEVVKLIK-SGAYVA 80 (93)
T ss_dssp CCCCEEEEEEECSSSSCCEEEECS--SSCEEEEECSSSTTTTTT-CCSSCEEEEETTEECSSSCHHHHHHHHT-SSSEEE
T ss_pred CCCCCEEEEEEeCCCceeEEEeCC--CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHhhc-CCCEEE
Confidence 357788899999999999999863 569999999999999999 999999999999999 45667777776 588899
Q ss_pred eeeccCC
Q psy4417 81 FTIAPQG 87 (440)
Q Consensus 81 l~v~p~~ 87 (440)
|+|....
T Consensus 81 l~v~R~~ 87 (93)
T 2dls_A 81 LTLLGSS 87 (93)
T ss_dssp EEEECCC
T ss_pred EEEEECC
Confidence 9997654
No 94
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.12 E-value=1.9e-10 Score=95.05 Aligned_cols=84 Identities=15% Similarity=0.316 Sum_probs=74.0
Q ss_pred CCCCeEEEEeeCCCCccEEEE-----ecCC-----CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHH
Q psy4417 4 PPHPLKKILGTGLSPCGLTVE-----QDAN-----GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIE 71 (440)
Q Consensus 4 ~~~~r~v~l~r~g~~lGiti~-----~~~~-----~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~ 71 (440)
+.+.+.|.+.|++.+|||++. ++.+ .+++|..|.++|||+++|.|+.||.|++|||.++ .++.++..+
T Consensus 7 ~~~~~~v~l~k~~~~lG~~i~~~~~~gg~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~ 86 (108)
T 1q7x_A 7 PGDIFEVELAKNDNSLGISVTVLFDKGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVET 86 (108)
T ss_dssp SSSEEEEEEESSSCSCCEEESSSSSSBCBCTTSSSCCCBEEEECTTSTHHHHTCCCSSCEEEEETTEECBSCTTSHHHHH
T ss_pred CCcEEEEEEEECCCCccEEEEEeccCCCccccCCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 566788999999999999998 5432 5699999999999999999999999999999999 488999999
Q ss_pred HHhcCCceeeeeccCC
Q psy4417 72 VVKSDGNIQFTIAPQG 87 (440)
Q Consensus 72 L~~~~~~v~l~v~p~~ 87 (440)
++..++.+.|.+....
T Consensus 87 ~~~~g~~v~l~v~R~~ 102 (108)
T 1q7x_A 87 LRNTGQVVHLLLEKGQ 102 (108)
T ss_dssp HHHTTSEEEEEEECCC
T ss_pred HHcCCCeEEEEEEeCC
Confidence 9988899999987643
No 95
>2ed1_A 130 kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; GTPase activation, membrane, metal-binding, SH3 domain; NMR {Homo sapiens} PDB: 2rqt_A 2rqu_A
Probab=99.11 E-value=4.4e-11 Score=92.63 Aligned_cols=59 Identities=17% Similarity=0.482 Sum_probs=52.4
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
...+++|+|||.+..++ +|+|++||+++|+++.+.+||.++..+..+..|+||++|++.
T Consensus 9 ~~~~~~alydy~~~~~~-------eLsf~~Gd~i~v~~~~~~~Ww~g~~~~~~g~~G~~P~~yv~~ 67 (76)
T 2ed1_A 9 KVRRVKTIYDCQADNDD-------ELTFIEGEVIIVTGEEDQEWWIGHIEGQPERKGVFPVSFVHI 67 (76)
T ss_dssp CCEEEEESSCCCCSSSS-------BCCCCSSCEEEESSCCSSSEEEEEETTCTTCEEEEEGGGEEE
T ss_pred CCeEEEECccCCCCCcC-------CcCcCCCCEEEEEEecCCCEEEEEECCCCCCEEEEehHHeEE
Confidence 45689999999998877 999999999999999999999999865456899999999864
No 96
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=99.11 E-value=3.8e-10 Score=94.87 Aligned_cols=85 Identities=26% Similarity=0.434 Sum_probs=74.4
Q ss_pred CCCCCCeEEEEeeCCCCccEEEEecCC-CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcCCc
Q psy4417 2 EHPPHPLKKILGTGLSPCGLTVEQDAN-GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSDGN 78 (440)
Q Consensus 2 ~~~~~~r~v~l~r~g~~lGiti~~~~~-~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~~~ 78 (440)
..+.+++.|.+.|...+|||++.++.+ .+++|..|.++|||+++|.|+.||+|++|||.++ .++.++..+++..++.
T Consensus 10 ~~~~~~~~v~l~k~~~glG~~l~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~ 89 (119)
T 1tp5_A 10 DIPREPRRIVIHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQT 89 (119)
T ss_dssp CCCCSCEEEEEECTTSCCCEEEEECGGGCCEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHTSCSE
T ss_pred CCCCccEEEEEEECCCCccEEEecCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 346889999999999999999998654 5799999999999999999999999999999999 4567888888888888
Q ss_pred eeeeeccC
Q psy4417 79 IQFTIAPQ 86 (440)
Q Consensus 79 v~l~v~p~ 86 (440)
+.|.+...
T Consensus 90 v~l~v~r~ 97 (119)
T 1tp5_A 90 VTIIAQYK 97 (119)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEEC
Confidence 99888754
No 97
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=99.11 E-value=3.6e-10 Score=89.60 Aligned_cols=78 Identities=21% Similarity=0.399 Sum_probs=66.9
Q ss_pred CCeEEEEeeCCCCccEEEEecCC--CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcCCceee
Q psy4417 6 HPLKKILGTGLSPCGLTVEQDAN--GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSDGNIQF 81 (440)
Q Consensus 6 ~~r~v~l~r~g~~lGiti~~~~~--~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~~~v~l 81 (440)
++..|.+ +++.+|||++.++.+ .+++|..|.++|||+++| |+.||.|++|||.++ .++.++..+++..++.+.|
T Consensus 3 ~~~~v~l-~~~~~~G~~l~~g~~~~~~~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l 80 (88)
T 2uzc_A 3 SNYSVSL-VGPAPWGFRLQGGKDFNMPLTISSLKDGGKAAQAN-VRIGDVVLSIDGINAQGMTHLEAQNKIKGCTGSLNM 80 (88)
T ss_dssp CEEEEEE-ESSSCCCEEEEEEGGGTEEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEE
T ss_pred cEEEEEE-cCCCcccEEEECcCCCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEE
Confidence 4566777 677899999998654 359999999999999999 999999999999999 4568999999877888888
Q ss_pred eecc
Q psy4417 82 TIAP 85 (440)
Q Consensus 82 ~v~p 85 (440)
.+..
T Consensus 81 ~v~R 84 (88)
T 2uzc_A 81 TLQR 84 (88)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 8864
No 98
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=99.10 E-value=3e-10 Score=90.37 Aligned_cols=77 Identities=25% Similarity=0.363 Sum_probs=66.0
Q ss_pred EEEEee--CCCCccEEEEecCCCcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcCCceeeeec
Q psy4417 9 KKILGT--GLSPCGLTVEQDANGNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSDGNIQFTIA 84 (440)
Q Consensus 9 ~v~l~r--~g~~lGiti~~~~~~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~~~v~l~v~ 84 (440)
.+.+.+ .+..+|+++.+ +++|.+|.++|||+++|+|+.||+|++|||.++ .+++++..+|+..++.+.|++.
T Consensus 3 ~v~l~~~~~~~~~G~~~~~----gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~~v~L~v~ 78 (88)
T 3e17_A 3 GVLLMKSRANEEYGLRLGS----QIFVKEMTRTGLATKDGNLHEGDIILKINGTVTENMSLTDARKLIEKSRGKLQLVVL 78 (88)
T ss_dssp EEEEECBTTBCCCCEEEEE----EEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHTTTEEEEEEC
T ss_pred EEEEEeCCCCCCCCEEEeC----CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEe
Confidence 345554 44689999976 599999999999999999999999999999999 8999999999999999999998
Q ss_pred cCCCC
Q psy4417 85 PQGDD 89 (440)
Q Consensus 85 p~~~~ 89 (440)
+.+..
T Consensus 79 ~~~~~ 83 (88)
T 3e17_A 79 RDLEH 83 (88)
T ss_dssp CC---
T ss_pred CCCcc
Confidence 86643
No 99
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=99.10 E-value=6.5e-10 Score=91.73 Aligned_cols=78 Identities=17% Similarity=0.226 Sum_probs=67.8
Q ss_pred eEEEEe-eCCCCccEEEEecCCCcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcCCceeeeec
Q psy4417 8 LKKILG-TGLSPCGLTVEQDANGNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSDGNIQFTIA 84 (440)
Q Consensus 8 r~v~l~-r~g~~lGiti~~~~~~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~~~v~l~v~ 84 (440)
..|.+. +.+.+||+++.+ ...+++|..|.++|||+++|+|+.||.|++|||.++ .++.++..+++..++.+.|.+.
T Consensus 4 ~~v~L~k~~~~glG~~i~~-~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~~~v~l~v~ 82 (106)
T 2la8_A 4 FNVDLMKKAGKELGLSLSP-NEIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGANGKVSMEVT 82 (106)
T ss_dssp EEEEECCBSSSTTCCEEEE-CSSSEEEEECCTTSCHHHHTTCCTTCEEEEESSCBCSSSCHHHHHHHHHSCBSCEEEEEE
T ss_pred EEEEEEeCCCCccCEEEEe-CCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEEEEEE
Confidence 457776 567899999987 446799999999999999999999999999999999 5788999999888888999887
Q ss_pred cC
Q psy4417 85 PQ 86 (440)
Q Consensus 85 p~ 86 (440)
..
T Consensus 83 R~ 84 (106)
T 2la8_A 83 RP 84 (106)
T ss_dssp EC
T ss_pred eC
Confidence 54
No 100
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=99.10 E-value=2.8e-10 Score=102.03 Aligned_cols=80 Identities=15% Similarity=0.306 Sum_probs=70.2
Q ss_pred CCeEEEEeeCCCCccEEEEe---cC-----CCcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhc
Q psy4417 6 HPLKKILGTGLSPCGLTVEQ---DA-----NGNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKS 75 (440)
Q Consensus 6 ~~r~v~l~r~g~~lGiti~~---~~-----~~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~ 75 (440)
+...|.+.|++.+|||+|.+ +. ..+++|..|.+||||+++|+|+.||+|++|||.++ .++.++..+|+..
T Consensus 80 ~~~~v~l~k~~~glG~~i~g~~~g~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~VNG~~v~~~~~~~~~~~l~~~ 159 (170)
T 3egg_C 80 ELFPVELEKDSEGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRNT 159 (170)
T ss_dssp EEEEEEEECBTTBSSEEEEEECSSSSCCSSSBEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTBCHHHHHHHHHHC
T ss_pred eEEEEEEEeCCCeEeEEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 34567788888999999998 22 14599999999999999999999999999999999 7899999999999
Q ss_pred CCceeeeecc
Q psy4417 76 DGNIQFTIAP 85 (440)
Q Consensus 76 ~~~v~l~v~p 85 (440)
++.+.|+|..
T Consensus 160 g~~v~L~V~R 169 (170)
T 3egg_C 160 KGRVRFMIGR 169 (170)
T ss_dssp CSEEEEEEEE
T ss_pred CCEEEEEEEe
Confidence 8999998864
No 101
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=99.10 E-value=1.1e-10 Score=97.88 Aligned_cols=84 Identities=23% Similarity=0.249 Sum_probs=74.0
Q ss_pred CCCCeEEEEeeC-CCCccEEEEecCC-----CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccCC---CHHHHHHHHHh
Q psy4417 4 PPHPLKKILGTG-LSPCGLTVEQDAN-----GNLIIARILAGSLIDKQGVLKVGDVILGVNGENVS---SPEDLQIEVVK 74 (440)
Q Consensus 4 ~~~~r~v~l~r~-g~~lGiti~~~~~-----~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v~---t~~e~~~~L~~ 74 (440)
..+++.|.+.|. +.+|||++.++.. .+++|..|.++|||+++|.|+.||.|++|||.++. +++++..+++.
T Consensus 18 ~~~~~~v~l~k~~~~~lG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~Il~ing~~v~~~~~~~~~~~~l~~ 97 (117)
T 2o2t_A 18 GRHVEVFELLKPPSGGLGFSVVGLRSENRGELGIFVQEIQEGSVAHRDGRLKETDQILAINGQALDQTITHQQAISILQK 97 (117)
T ss_dssp TSCEEEEEEECCSSSCSSCCEEEEECCC--CEEEEECCCCTTSHHHHHCCCCTTCEEEEETTEECCTTSCHHHHHHHHHH
T ss_pred CCeEEEEEEEECCCCCCCEEEeecccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCCHHHHHHHHHc
Confidence 467888999987 5899999997642 45999999999999999999999999999999997 99999999998
Q ss_pred cCCceeeeeccCC
Q psy4417 75 SDGNIQFTIAPQG 87 (440)
Q Consensus 75 ~~~~v~l~v~p~~ 87 (440)
.++.+.|.|....
T Consensus 98 ~~~~v~l~v~R~~ 110 (117)
T 2o2t_A 98 AKDTVQLVIARGS 110 (117)
T ss_dssp CCSEEEEEEESSC
T ss_pred CCCEEEEEEEeCC
Confidence 8899999987653
No 102
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=99.10 E-value=8.3e-11 Score=92.35 Aligned_cols=79 Identities=30% Similarity=0.420 Sum_probs=69.1
Q ss_pred CCCeEEEEeeCCCCccEEEEecCCCcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcCCceeee
Q psy4417 5 PHPLKKILGTGLSPCGLTVEQDANGNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSDGNIQFT 82 (440)
Q Consensus 5 ~~~r~v~l~r~g~~lGiti~~~~~~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~~~v~l~ 82 (440)
+.+|.|.+.|+..+|||++.++ .+++|..|.++|||+++| |+.||.|++|||.++ .+++++..+++..++.+.|+
T Consensus 1 ~~~r~v~l~~~~~g~G~~~~~~--~~~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~ 77 (83)
T 2kv8_A 1 PRVRSVEVARGRAGYGFTLSGQ--APCVLSCVMRGSPADFVG-LRAGDQILAVNEINVKKASHEDVVKLIGKCSGVLHMV 77 (83)
T ss_dssp CCEEEEEECCCSSCCSCBCCCS--SSCBCCBCCTTSTTTTTT-CCTTCEEEEETTEECSSCCHHHHHHHHTTCSSCEEEE
T ss_pred CCcEEEEEEeCCCcccEEEEcC--CCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEE
Confidence 3578899999999999998763 368999999999999999 999999999999999 55699999998777888888
Q ss_pred eccC
Q psy4417 83 IAPQ 86 (440)
Q Consensus 83 v~p~ 86 (440)
+...
T Consensus 78 v~R~ 81 (83)
T 2kv8_A 78 IAEG 81 (83)
T ss_dssp EECC
T ss_pred EEcC
Confidence 8654
No 103
>1b07_A Protein (proto-oncogene CRK (CRK)); SH3 domain, inhibitors, peptoids, protein-protein recognition, proline-rich motifs, signal transduction; 2.50A {Mus musculus} SCOP: b.34.2.1
Probab=99.09 E-value=5.7e-11 Score=89.17 Aligned_cols=55 Identities=33% Similarity=0.784 Sum_probs=49.1
Q ss_pred cccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHH
Q psy4417 97 VCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELE 160 (440)
Q Consensus 97 ~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~ 160 (440)
..+++|+|||.+..++ +|+|++||++.|++..+++||.++.. ++..|+||++++.
T Consensus 3 ~~~~~Alydy~~~~~~-------eLsf~~Gd~i~v~~~~~~~Ww~g~~~--~g~~G~~P~~yv~ 57 (65)
T 1b07_A 3 AEYVRALFDFNGNDEE-------DLPFKKGDILRIRDKPEEQWWNAEDS--EGKRGMIPVPYVE 57 (65)
T ss_dssp CCEEEESSCBCCSSTT-------BCCBCTTCEEEEEECSSSSEEEEECT--TSCEEEEEGGGEE
T ss_pred ceEEEECCcCCCCCCC-------ccCCcCCCEEEEEEecCCCeEEEEEC--CCCEEEEChHHEe
Confidence 4578999999998887 99999999999999999999999854 4789999999974
No 104
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=99.09 E-value=8.2e-10 Score=92.31 Aligned_cols=83 Identities=19% Similarity=0.300 Sum_probs=71.6
Q ss_pred CCCCeEEEEeeCCC-CccEEEEecCCC--cEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcCCc
Q psy4417 4 PPHPLKKILGTGLS-PCGLTVEQDANG--NLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSDGN 78 (440)
Q Consensus 4 ~~~~r~v~l~r~g~-~lGiti~~~~~~--~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~~~ 78 (440)
+..++.|.+.|... .|||++.++... +++|..|.++|||+++|.|+.||+|++|||.++ .+++++..+|+..++.
T Consensus 22 ~~~~~~V~l~~~~~~~lG~~l~~~~~~~~~~~V~~V~~gspA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~~ 101 (114)
T 2gzv_A 22 SMVPGKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGE 101 (114)
T ss_dssp CCCCEEEEEECCTTSCCSEEEEECCC--CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSE
T ss_pred cCCCEEEEEEECCCCcEeEEEEeCCCCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 35678899998765 599999986553 599999999999999999999999999999999 8999999999988787
Q ss_pred eeeeeccC
Q psy4417 79 IQFTIAPQ 86 (440)
Q Consensus 79 v~l~v~p~ 86 (440)
+.|+|...
T Consensus 102 v~l~v~~~ 109 (114)
T 2gzv_A 102 VTIHYNKL 109 (114)
T ss_dssp EEEEEECC
T ss_pred EEEEEEec
Confidence 88887543
No 105
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.09 E-value=1.1e-09 Score=91.44 Aligned_cols=84 Identities=27% Similarity=0.408 Sum_probs=71.2
Q ss_pred CCCCeEEEEeeC-CCCccEEEEecCC----C-----cEEEEEEcCCChhhh-cCCCCCCCEEEeECCccC--CCHHHHHH
Q psy4417 4 PPHPLKKILGTG-LSPCGLTVEQDAN----G-----NLIIARILAGSLIDK-QGVLKVGDVILGVNGENV--SSPEDLQI 70 (440)
Q Consensus 4 ~~~~r~v~l~r~-g~~lGiti~~~~~----~-----~i~V~~V~~gs~A~~-~G~L~~GD~Il~VNg~~v--~t~~e~~~ 70 (440)
..+++.|.+.|. +.+|||+|.++.+ + .++|..|.++|||++ +| |+.||+|++|||.++ .+++++..
T Consensus 8 ~~~~~~v~l~~~~~~~lGf~l~~~~~~~~~g~~~~~~~~V~~V~~~spA~~~ag-L~~GD~I~~ing~~v~~~~~~~~~~ 86 (114)
T 1uew_A 8 SLQTSDVVIHRKENEGFGFVIISSLNRPESGSTITVPHKIGRIIDGSPADRCAK-LKVGDRILAVNGQSIINMPHADIVK 86 (114)
T ss_dssp CCCCEEEEEECCTTSCCCEEEECCCCSCCSSCCSCCSCEEEEECTTCTTGGGSS-CCTTCBEEEETTBCTTTSCHHHHHH
T ss_pred cccceEEEEEECCCCCCCEEEEeecccCCCCcccccCeEEEEECCCChHHHhCC-CCCCCEEEEECCEECCCCCHHHHHH
Confidence 467888999875 5799999987532 1 469999999999999 88 999999999999999 44899999
Q ss_pred HHHhcCCceeeeeccCCC
Q psy4417 71 EVVKSDGNIQFTIAPQGD 88 (440)
Q Consensus 71 ~L~~~~~~v~l~v~p~~~ 88 (440)
+|+..+..+.|.|.+...
T Consensus 87 ~l~~~g~~v~l~v~r~~~ 104 (114)
T 1uew_A 87 LIKDAGLSVTLRIIPQEE 104 (114)
T ss_dssp HHHHTTTEEEEEECCCSC
T ss_pred HHHcCCCeEEEEEEeCCc
Confidence 999888899999987543
No 106
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=99.09 E-value=4.3e-10 Score=91.06 Aligned_cols=79 Identities=27% Similarity=0.347 Sum_probs=68.9
Q ss_pred CeEEEEee-CCCCccEEEEecCC--------CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhc
Q psy4417 7 PLKKILGT-GLSPCGLTVEQDAN--------GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKS 75 (440)
Q Consensus 7 ~r~v~l~r-~g~~lGiti~~~~~--------~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~ 75 (440)
++.+++.| ++.+|||++.++.+ .+++|..|.++|||+++|.|+.||.|++|||.++ .++.++..+++..
T Consensus 6 ~~~v~l~k~~~~glG~~i~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 85 (98)
T 1ihj_A 6 IHMVTLDKTGKKSFGICIVRGEVKDSPNTKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKEA 85 (98)
T ss_dssp EEEEEEECTTSSSCCEEEEEEEECCSSSCCEEEEEEEEECTTSHHHHHCSCCTTCEEEEETTEECTTCCHHHHHHHHHHS
T ss_pred EEEEEEEeCCCCCcCEEEeccccCCccccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcC
Confidence 56788888 67899999987642 2599999999999999999999999999999999 4579999999988
Q ss_pred CCceeeeecc
Q psy4417 76 DGNIQFTIAP 85 (440)
Q Consensus 76 ~~~v~l~v~p 85 (440)
++.+.|+|..
T Consensus 86 g~~v~l~v~R 95 (98)
T 1ihj_A 86 DFKIELEIQT 95 (98)
T ss_dssp CSEEEEEEEE
T ss_pred CCeEEEEEEe
Confidence 8889998865
No 107
>3tau_A Guanylate kinase, GMP kinase; structural genomics, center for structural genomics of infec diseases, csgid, putative guanylate kinase; HET: MSE; 2.05A {Listeria monocytogenes}
Probab=99.08 E-value=2e-10 Score=105.96 Aligned_cols=101 Identities=35% Similarity=0.427 Sum_probs=83.2
Q ss_pred hcCCe-EEeecCcchhhhhhhhhccccccccCCCceEEecCCCccceeecCCCcccchhhccCccccccCHHHHHHHHHc
Q psy4417 259 LSGKI-CVLDCSPVGLFTFLLGLIEGTVTAKLIPYTYSIPICSWSSFFASDTTRPMRELEENGQNYWFTSREVMERDIQD 337 (440)
Q Consensus 259 ~~g~~-~il~~~~~g~~~l~~~l~~~~~~~~~~p~~i~i~~~~~~~f~~~~ttr~~~~~e~~g~~y~f~s~~~f~~~~~~ 337 (440)
.+|++ +|++.+.+|..+|++.|... +.|... +..++|||+++.+|.+|.+|+|++.+.|.+++..
T Consensus 6 ~~g~~i~l~GpsGsGKsTl~~~L~~~-----~~~~~~---------~~~~~~tr~~~~~e~~g~~y~~~~~~~f~~~~~~ 71 (208)
T 3tau_A 6 ERGLLIVLSGPSGVGKGTVREAVFKD-----PETSFD---------YSISMTTRLPREGEQDGVDYYFRSREVFEQAIKD 71 (208)
T ss_dssp CCCCEEEEECCTTSCHHHHHHHHHHS-----TTCCCE---------ECCCEESSCCCTTCCBTTTBEECCHHHHHHHHHT
T ss_pred CCCcEEEEECcCCCCHHHHHHHHHhh-----CCCcEE---------EEEecccccCcCcccCCceeEEecHHHHHHHHhc
Confidence 45664 44445555567777766533 223244 7789999999999999999999999999999999
Q ss_pred CceeeEEEEcCccccccHHHHHHHHhcCCeeEecCC
Q psy4417 338 HKFLEYGEHNGHLYGTHLDSIREVILSGKICVLDCS 373 (440)
Q Consensus 338 ~~fle~~~~~~~~yGt~~~~i~~~~~~~~~~i~~~~ 373 (440)
+.|+||+++.+++|||+.+.++++++.|+.++++..
T Consensus 72 ~~~le~~~~~~~~yg~~~~~i~~~l~~g~~vild~~ 107 (208)
T 3tau_A 72 GKMLEYAEYVGNYYGTPLEYVEEKLAAGVDIFLEIE 107 (208)
T ss_dssp TCEEEEEEETTEEEEEEHHHHHHHHHTTCCEEEECC
T ss_pred CcEEEEEEEccccCCCcHHHHHHHHHcCCeEEEEee
Confidence 999999999999999999999999999999988763
No 108
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.08 E-value=6.8e-10 Score=92.57 Aligned_cols=81 Identities=25% Similarity=0.439 Sum_probs=71.0
Q ss_pred CCeEEEEeeCCC-CccEEEEecCCCcEEEEEEcCCChhhhcCCCCCCCEEEeECCccCC--CHHHHHHHHHhcCCceeee
Q psy4417 6 HPLKKILGTGLS-PCGLTVEQDANGNLIIARILAGSLIDKQGVLKVGDVILGVNGENVS--SPEDLQIEVVKSDGNIQFT 82 (440)
Q Consensus 6 ~~r~v~l~r~g~-~lGiti~~~~~~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v~--t~~e~~~~L~~~~~~v~l~ 82 (440)
..+.|.+.|... +|||++.+. ..+++|..|.++|||+++|.|+.||+|++|||..+. +++++..+|+..++.+.|+
T Consensus 25 ~~~~v~l~k~~~~~lG~~i~~~-~~gv~V~~V~~~spA~~aGll~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~ 103 (113)
T 1va8_A 25 TVKIVRIEKARDIPLGATVRNE-MDSVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLLSDMHGTLTFV 103 (113)
T ss_dssp ECEEEEEEECTTCCCCEEEEEC-SSSEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCEEEEEE
T ss_pred ceEEEEEEeCCCCceeEEEEeC-CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEE
Confidence 567788888876 999999874 567999999999999999944999999999999994 8999999999888889999
Q ss_pred eccCC
Q psy4417 83 IAPQG 87 (440)
Q Consensus 83 v~p~~ 87 (440)
|.+..
T Consensus 104 v~r~~ 108 (113)
T 1va8_A 104 LIPSS 108 (113)
T ss_dssp EECCC
T ss_pred EEECC
Confidence 98654
No 109
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=99.07 E-value=4.9e-10 Score=92.94 Aligned_cols=79 Identities=11% Similarity=0.111 Sum_probs=69.0
Q ss_pred CCeEEEEeeCCCCccEEEEecCCCcEEEEEEcCCChhhhcCCCCCCCEEEeECCccCC--CHHHHHHHHHhcCCc-eeee
Q psy4417 6 HPLKKILGTGLSPCGLTVEQDANGNLIIARILAGSLIDKQGVLKVGDVILGVNGENVS--SPEDLQIEVVKSDGN-IQFT 82 (440)
Q Consensus 6 ~~r~v~l~r~g~~lGiti~~~~~~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v~--t~~e~~~~L~~~~~~-v~l~ 82 (440)
.+|.|.+.|++.++||++.+ ..+++|..|.++|||+++| |+.||.|++|||.++. +++++..+|+..++. +.|+
T Consensus 23 ~~r~v~l~k~~~~~G~~l~~--~~~v~V~~V~~gspA~~AG-L~~GD~Il~VnG~~v~~~~~~dv~~~i~~~~~~~v~l~ 99 (109)
T 2vsv_A 23 MPRSIRFTAEEGDLGFTLRG--NAPVQVHFLDPYCSASVAG-AREGDYIVSIQLVDCKWLTLSEVMKLLKSFGEDEIEMK 99 (109)
T ss_dssp SCEEEEECCGGGCCCEEEES--SSSCEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTTTTSCEEEE
T ss_pred CCEEEEEEeCCCceeEEEeC--CCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEEEE
Confidence 57889999988999999975 3468999999999999999 9999999999999995 889999999877665 8888
Q ss_pred eccCC
Q psy4417 83 IAPQG 87 (440)
Q Consensus 83 v~p~~ 87 (440)
|....
T Consensus 100 V~~~~ 104 (109)
T 2vsv_A 100 VVSLL 104 (109)
T ss_dssp EESCC
T ss_pred EEECC
Confidence 87543
No 110
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=99.07 E-value=1.1e-09 Score=89.37 Aligned_cols=83 Identities=23% Similarity=0.312 Sum_probs=69.9
Q ss_pred CCCeEEEEeeCC-CCccEEEEecCC-----------CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccCC--CHHHHHH
Q psy4417 5 PHPLKKILGTGL-SPCGLTVEQDAN-----------GNLIIARILAGSLIDKQGVLKVGDVILGVNGENVS--SPEDLQI 70 (440)
Q Consensus 5 ~~~r~v~l~r~g-~~lGiti~~~~~-----------~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v~--t~~e~~~ 70 (440)
-+|+.+.+.+.. ..||+++.+... .+++|..|.++|||+++|.|+.||.|++|||.++. +++++..
T Consensus 3 ldp~~v~l~~~~~~~lG~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~ 82 (103)
T 2fcf_A 3 MQPRRVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVE 82 (103)
T ss_dssp CSCEEEEECCCC-CCCCEEEECCCC-------------EEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHH
T ss_pred CCCEEEEEEeCCCCceeEEEEccCCCCcccccCCCCCCEEEEEeCCCCcHHHcCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 356788998865 689999987432 35999999999999999999999999999999994 4999999
Q ss_pred HHHhcCCceeeeeccCC
Q psy4417 71 EVVKSDGNIQFTIAPQG 87 (440)
Q Consensus 71 ~L~~~~~~v~l~v~p~~ 87 (440)
+|+..++.+.|.|....
T Consensus 83 ~l~~~~~~v~l~v~r~~ 99 (103)
T 2fcf_A 83 AIRKAGNPVVFMVQSII 99 (103)
T ss_dssp HHHTCCSSEEEEEECCC
T ss_pred HHHhCCCcEEEEEEECC
Confidence 99988888898887654
No 111
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=99.06 E-value=7.5e-10 Score=93.95 Aligned_cols=83 Identities=20% Similarity=0.349 Sum_probs=71.8
Q ss_pred CCCCeEEEEeeC-CCCccEEEEecCC--CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcCCc
Q psy4417 4 PPHPLKKILGTG-LSPCGLTVEQDAN--GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSDGN 78 (440)
Q Consensus 4 ~~~~r~v~l~r~-g~~lGiti~~~~~--~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~~~ 78 (440)
.-.++.+.+.|. ..+|||++.++.. .+++|..|.++|||+++|+|+.||+|++|||.++ .+++++..+|++.++.
T Consensus 17 ~~~~~~v~l~k~~~~~lG~~i~gg~~~~~~~~V~~v~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~~ 96 (125)
T 3hpk_A 17 PTVPGKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGE 96 (125)
T ss_dssp CEEEEEEEEECCTTSCCCEEEEECSSCCSSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHSCSE
T ss_pred cCCCeEEEEEeCCCCCcCEEEeccCCCCCCEEEEEeCCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 345677888875 4689999998764 4599999999999999999999999999999999 5899999999998888
Q ss_pred eeeeeccC
Q psy4417 79 IQFTIAPQ 86 (440)
Q Consensus 79 v~l~v~p~ 86 (440)
+.|++...
T Consensus 97 v~l~v~r~ 104 (125)
T 3hpk_A 97 VTIHYNKL 104 (125)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEC
Confidence 98888653
No 112
>1tg0_A BBC1 protein, myosin tail region-interacting protein MTI1; yeast, SH3 domain, structural genomics, contractIle protein; 0.97A {Saccharomyces cerevisiae} PDB: 1zuk_A 1wdx_A
Probab=99.06 E-value=8.4e-11 Score=88.98 Aligned_cols=58 Identities=16% Similarity=0.378 Sum_probs=50.3
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCC--CCccccchhHH
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTG--PMGLVPSQELE 160 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~--~~G~iPs~~~~ 160 (440)
....++|+|||.+..++ +|+|++||++.|++..+.+||.++..+..+ ..|+||+++++
T Consensus 6 ~~~~~~Alydy~~~~~~-------eLsf~~Gd~i~v~~~~~~~Ww~g~~~~~g~~~~~G~fP~~yv~ 65 (68)
T 1tg0_A 6 VPFKVVAQFPYKSDYED-------DLNFEKDQEIIVTSVEDAEWYFGEYQDSNGDVIEGIFPKSFVA 65 (68)
T ss_dssp SSEEEEESSCBCCSCTT-------BCCBCTTCEEEEEEECSSSEEEEEEECTTSCEEEEEEEGGGEE
T ss_pred CCEEEEECeeECcCCcC-------CCCCCCCCEEEEEEecCCCeEEEEECCCCCCCEEEEEchHHEE
Confidence 45689999999998877 999999999999999999999999865321 78999999975
No 113
>1zlm_A Osteoclast stimulating factor 1; beta barrel, signaling protein; 1.07A {Homo sapiens}
Probab=99.06 E-value=6.9e-11 Score=86.50 Aligned_cols=55 Identities=38% Similarity=0.814 Sum_probs=49.1
Q ss_pred cccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 97 VCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 97 ~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
..+++|+++|.+..++ +|+|++||++.|++..+++||.++. ++..|+||++++.+
T Consensus 3 ~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv~~ 57 (58)
T 1zlm_A 3 VKVFRALYTFEPRTPD-------ELYFEEGDIIYITDMSDTNWWKGTS---KGRTGLIPSNYVAE 57 (58)
T ss_dssp CEEEEESSCBCCSSTT-------BCCBCTTCEEEEEECCSSSEEEEEE---TTEEEEEEGGGEEE
T ss_pred cEEEEECccCCCCCCC-------CccCCCCCEEEEEEeCCCCEEEEEE---CCCEEEEehHHEEe
Confidence 3468999999998777 9999999999999999999999997 57899999999864
No 114
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.05 E-value=9.2e-10 Score=90.15 Aligned_cols=83 Identities=20% Similarity=0.292 Sum_probs=71.9
Q ss_pred CCCeEEEEeeCCCCccEEEEecC----CCcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcCCc
Q psy4417 5 PHPLKKILGTGLSPCGLTVEQDA----NGNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSDGN 78 (440)
Q Consensus 5 ~~~r~v~l~r~g~~lGiti~~~~----~~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~~~ 78 (440)
.+.+.+.+.+...+|||++.++. +.+++|..|.++|||+++|.|+.||+|++|||.++ .++.++..+++..+..
T Consensus 10 ~~~~~v~l~~~~~g~G~~l~~~~~~~~~~~v~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~ 89 (104)
T 2djt_A 10 SGHFSVELVRGYAGFGLTLGGGRDVAGDTPLAVRGLLKDGPAQRCGRLEVGDLVLHINGESTQGLTHAQAVERIRAGGPQ 89 (104)
T ss_dssp CCCEEEEEECCSSSCCEEEECCEETTEECCCEEEEECTTCHHHHHCSCCTTCBEEEETTEECTTCCHHHHHHHHHHTCSE
T ss_pred CceEEEEEEeCCCCccEEEEeccCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 45678889898899999999753 35699999999999999999999999999999999 4589999989888888
Q ss_pred eeeeeccCC
Q psy4417 79 IQFTIAPQG 87 (440)
Q Consensus 79 v~l~v~p~~ 87 (440)
+.|+|....
T Consensus 90 v~l~v~R~g 98 (104)
T 2djt_A 90 LHLVIRRPL 98 (104)
T ss_dssp EEEEECCCC
T ss_pred EEEEEEECC
Confidence 999986543
No 115
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=99.05 E-value=9.4e-10 Score=89.08 Aligned_cols=79 Identities=19% Similarity=0.257 Sum_probs=67.5
Q ss_pred CCCeEEEEeeCCCCccEEEEecCC-CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccCCC--HHHHHHHHHhcCCc-ee
Q psy4417 5 PHPLKKILGTGLSPCGLTVEQDAN-GNLIIARILAGSLIDKQGVLKVGDVILGVNGENVSS--PEDLQIEVVKSDGN-IQ 80 (440)
Q Consensus 5 ~~~r~v~l~r~g~~lGiti~~~~~-~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v~t--~~e~~~~L~~~~~~-v~ 80 (440)
..++.+.+.+...++||++.++.+ .+++|..|.++|||+++| |+.||.|++|||.++.+ ++++..+|+...+. +.
T Consensus 8 ~~~~~~~l~~~~~g~G~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~ 86 (98)
T 2jxo_A 8 LRPRLCTMKKGPSGYGFNLHSDKSKPGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETKL 86 (98)
T ss_dssp SCCEEEEEECTTTCCCEEEECCCSSSCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTTTTEEEE
T ss_pred CCcEEEEEEeCCCcccEEEEecCCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEE
Confidence 467889999999999999987653 479999999999999999 99999999999999955 99999999876544 44
Q ss_pred eeec
Q psy4417 81 FTIA 84 (440)
Q Consensus 81 l~v~ 84 (440)
+.+.
T Consensus 87 l~v~ 90 (98)
T 2jxo_A 87 LVVD 90 (98)
T ss_dssp EECC
T ss_pred EEEE
Confidence 6664
No 116
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=99.05 E-value=4.2e-10 Score=93.69 Aligned_cols=81 Identities=15% Similarity=0.303 Sum_probs=70.7
Q ss_pred CeEEEEeeCCCCccEEEEe---cC-----CCcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcC
Q psy4417 7 PLKKILGTGLSPCGLTVEQ---DA-----NGNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSD 76 (440)
Q Consensus 7 ~r~v~l~r~g~~lGiti~~---~~-----~~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~ 76 (440)
...|.+.|.+.+|||++.+ +. ..+++|..|.++|||+++|+|+.||.|++|||.++ .++.++..+++..+
T Consensus 5 ~~~v~l~k~~~glG~~l~~~~~~~~~~~~~~g~~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g 84 (113)
T 2g5m_B 5 LFPVELEKDSEGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRNTK 84 (113)
T ss_dssp EEEEECCCCSSCCCCEEEEEECCCCSSSCCEEEEEEECCTTSHHHHHTCSCTTCBEEEETTEECSSCCHHHHHHHHHHSC
T ss_pred EEEEEEEeCCCCCCEEEEecCCCCcCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCC
Confidence 4567788888999999998 22 24699999999999999999999999999999999 57999999999889
Q ss_pred CceeeeeccCC
Q psy4417 77 GNIQFTIAPQG 87 (440)
Q Consensus 77 ~~v~l~v~p~~ 87 (440)
+.+.|.|....
T Consensus 85 ~~v~l~v~R~~ 95 (113)
T 2g5m_B 85 GRVRFMIGRER 95 (113)
T ss_dssp SSCEEEEEECC
T ss_pred CeEEEEEEeCC
Confidence 99999997654
No 117
>2gnc_A SLIT-ROBO RHO GTPase-activating protein 1; beta barrel, signaling protein; 1.80A {Mus musculus}
Probab=99.05 E-value=5.2e-11 Score=87.82 Aligned_cols=56 Identities=25% Similarity=0.528 Sum_probs=48.8
Q ss_pred CccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHH
Q psy4417 95 KPVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELE 160 (440)
Q Consensus 95 ~~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~ 160 (440)
....+++|++||.+..++ +|+|++||++.|++..+++||.++. ++..|+||+++++
T Consensus 4 ~~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv~ 59 (60)
T 2gnc_A 4 GSPEFAIAKFDYVGRSAR-------ELSFKKGASLLLYHRASEDWWEGRH---NGIDGLVPHQYIV 59 (60)
T ss_dssp --CEEEEESSCBCCSSTT-------BCCBCTTCEEEEEEEEETTEEEEEE---TTEEEEEEGGGEE
T ss_pred CCCEEEEECCCCCcCCcC-------CcCCCCCCEEEEEEecCCCEEEEEE---CCeEEEEeHhhEE
Confidence 356789999999998877 9999999999999988889999998 4789999999863
No 118
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=99.05 E-value=8.7e-10 Score=91.19 Aligned_cols=81 Identities=15% Similarity=0.252 Sum_probs=68.6
Q ss_pred CCeEEEEee-CCCCccEEEEecCCC--------------cEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHH
Q psy4417 6 HPLKKILGT-GLSPCGLTVEQDANG--------------NLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDL 68 (440)
Q Consensus 6 ~~r~v~l~r-~g~~lGiti~~~~~~--------------~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~ 68 (440)
+++.+.+.| ...+|||++.++... +++|..|.++|||+++| |+.||+|++|||.++ .++.++
T Consensus 7 ~~~~v~l~~~~~~g~G~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~ 85 (109)
T 1q3o_A 7 KEKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAG-LRMGDFLIEVNGQNVVKVGHRQV 85 (109)
T ss_dssp EEEEEEEECCTTSCCSEEEEESSCCCTTSCCCCCSSCCSSEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHH
T ss_pred CcEEEEEEECCCCCCcEEEEeccCCCCcccccccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHH
Confidence 456788864 567999999986541 58999999999999999 999999999999999 566999
Q ss_pred HHHHHhcCCceeeeeccCC
Q psy4417 69 QIEVVKSDGNIQFTIAPQG 87 (440)
Q Consensus 69 ~~~L~~~~~~v~l~v~p~~ 87 (440)
..+++..++.+.|+|.+..
T Consensus 86 ~~~l~~~~~~v~l~v~~~~ 104 (109)
T 1q3o_A 86 VNMIRQGGNTLMVKVVMVT 104 (109)
T ss_dssp HHHHHHTTTEEEEEEEEEE
T ss_pred HHHHHhCCCEEEEEEEECC
Confidence 9999988888888887643
No 119
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=99.05 E-value=7e-10 Score=91.43 Aligned_cols=76 Identities=18% Similarity=0.402 Sum_probs=64.6
Q ss_pred EEeeCCCCccEEEEecCC-------CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcCCceee
Q psy4417 11 ILGTGLSPCGLTVEQDAN-------GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSDGNIQF 81 (440)
Q Consensus 11 ~l~r~g~~lGiti~~~~~-------~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~~~v~l 81 (440)
.+.....+|||+|.+|.+ .+++|..|.++|||+++|.|+.||+|++|||.++ .++.++..+++..++.+.|
T Consensus 7 ~~~~~~~~~Gf~i~gG~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~v~l 86 (106)
T 4amh_A 7 LVPRGSKGLGFSIAGGVGNQHWPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVALEEVTHEEAVTALKNTSDFVYL 86 (106)
T ss_dssp -----CCCSCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHSCCSEEEE
T ss_pred cCCCCCCccCEEEEeccCCccccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEEE
Confidence 344567899999998764 2699999999999999999999999999999999 6799999999988889999
Q ss_pred eeccC
Q psy4417 82 TIAPQ 86 (440)
Q Consensus 82 ~v~p~ 86 (440)
+|...
T Consensus 87 ~v~R~ 91 (106)
T 4amh_A 87 KVAKP 91 (106)
T ss_dssp EEECC
T ss_pred EEEeC
Confidence 98764
No 120
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.04 E-value=3.1e-10 Score=94.90 Aligned_cols=84 Identities=21% Similarity=0.358 Sum_probs=73.5
Q ss_pred CCCCeEEEEeeCCCCccEEEEecCC---CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcCCc
Q psy4417 4 PPHPLKKILGTGLSPCGLTVEQDAN---GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSDGN 78 (440)
Q Consensus 4 ~~~~r~v~l~r~g~~lGiti~~~~~---~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~~~ 78 (440)
+.+.+.+.+.+...+|||++.++.+ ++++|..|.++|||+++|.|+.||+|++|||.++ .++.++..+++..++.
T Consensus 15 ~~~~~~v~l~~~~~glG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~ 94 (116)
T 2dm8_A 15 PGQEMIIEISKGRSGLGLSIVGGKDTPLNAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRNSSHEEAITALRQTPQK 94 (116)
T ss_dssp TTSCEEEEEECCSSCCCCCCBCCTTSSCSSEECCCCCSSSHHHHHTCCCTTCEEEEETTEECSSSCHHHHHHHHHTCCSE
T ss_pred CCCEEEEEEEECCCcccEEEeCCCCCCcCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCe
Confidence 4667788898988999999987654 5799999999999999999999999999999999 4589999999988888
Q ss_pred eeeeeccCC
Q psy4417 79 IQFTIAPQG 87 (440)
Q Consensus 79 v~l~v~p~~ 87 (440)
+.|.|....
T Consensus 95 v~l~v~R~~ 103 (116)
T 2dm8_A 95 VRLVVYRDE 103 (116)
T ss_dssp EEEEEECCS
T ss_pred EEEEEEeCC
Confidence 899886543
No 121
>1k4u_S Phagocyte NADPH oxidase subunit P67PHOX; SH3-peptide complex, helix-turn-helix, hormone/growth factor complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=99.04 E-value=1.4e-10 Score=86.05 Aligned_cols=55 Identities=25% Similarity=0.612 Sum_probs=49.1
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHH
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELE 160 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~ 160 (440)
...+++|++||.+..++ +|+|++||++.|++..+.+||.++. ++..|+||++++.
T Consensus 4 ~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv~ 58 (62)
T 1k4u_S 4 KGSQVEALFSYEATQPE-------DLEFQEGDIILVLSKVNEEWLEGES---KGKVGIFPKVFVE 58 (62)
T ss_dssp CCEEEECCSCBCCCSSS-------BCCBCSSCEEEEEEESSSSCEEEEC---SSCEEEECGGGCC
T ss_pred CCeEEEECCCCCcCCCC-------CccCCCCCEEEEEEeCCCCEEEEEE---CCcEEEEeHHHEE
Confidence 34678999999998877 9999999999999998999999995 5789999999975
No 122
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.04 E-value=1.8e-09 Score=92.01 Aligned_cols=83 Identities=16% Similarity=0.250 Sum_probs=70.7
Q ss_pred CCCeEEEEee-CCCCccEEEEecC-------CCcEEEEEEcCCChhhhcCCCCCCCEEEeECCccCC--CHHHHHHHHHh
Q psy4417 5 PHPLKKILGT-GLSPCGLTVEQDA-------NGNLIIARILAGSLIDKQGVLKVGDVILGVNGENVS--SPEDLQIEVVK 74 (440)
Q Consensus 5 ~~~r~v~l~r-~g~~lGiti~~~~-------~~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v~--t~~e~~~~L~~ 74 (440)
.+.+.|.+.+ .+.+|||++.++. ..+++|..|.++|||+++|.|+.||.|++|||.++. +++++..+|+.
T Consensus 14 ~~~~~v~l~~~~~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~ 93 (129)
T 2dmz_A 14 FETYNVELVRKDGQSLGIRIVGYVGTSHTGEASGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGVNIQGFANHDVVEVLRN 93 (129)
T ss_dssp EEEEEEEECCCTTCCCCEEEEEECCCSSSCCCCEEEEEEECTTSHHHHHTCCCSSCBEEEETTBCCTTCCHHHHHHHHHH
T ss_pred CcEEEEEEEeCCCCCcCEEEEeecCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 4556777744 6789999999853 356999999999999999999999999999999994 59999999999
Q ss_pred cCCceeeeeccCC
Q psy4417 75 SDGNIQFTIAPQG 87 (440)
Q Consensus 75 ~~~~v~l~v~p~~ 87 (440)
.++.+.|.|....
T Consensus 94 ~~~~v~l~v~R~~ 106 (129)
T 2dmz_A 94 AGQVVHLTLVRRK 106 (129)
T ss_dssp CCSSEEEEEEEES
T ss_pred CCCeEEEEEEeCC
Confidence 8888999987654
No 123
>3ulr_B SRC substrate cortactin; SH3, protein-protein interaction, hydrolase, protein binding; 1.65A {Mus musculus} SCOP: b.34.2.0 PDB: 2d1x_A
Probab=99.03 E-value=1.7e-10 Score=86.25 Aligned_cols=56 Identities=25% Similarity=0.550 Sum_probs=49.9
Q ss_pred CccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHH
Q psy4417 95 KPVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELE 160 (440)
Q Consensus 95 ~~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~ 160 (440)
.....++|+|||.+..++ +|+|++||++.|++..+.+||.++. ++..|+||+++++
T Consensus 7 ~~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv~ 62 (65)
T 3ulr_B 7 DLGITAIALYDYQAAGDD-------EISFDPDDIITNIEMIDDGWWRGVC---KGRYGLFPANYVE 62 (65)
T ss_dssp SCCSCEEECSCBCCCSTT-------BCCBCTTCEEEEEECCSSSEEEEEE---TTEEEEEEGGGEE
T ss_pred CCceEEEEEeeECCCCcC-------EeeEecCCEEEEEEecCCCEEEEEE---CCcEEEEehHHeE
Confidence 345678999999998877 9999999999999999999999996 4789999999875
No 124
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=99.03 E-value=9.6e-10 Score=90.50 Aligned_cols=81 Identities=16% Similarity=0.267 Sum_probs=68.8
Q ss_pred CCCeEEEEeeCC-CCccEEEEecCC--CcEEEEEEcCCChhhhcC-CCCCCCEEEeECCccC--CCHHHHHHHHHhcCC-
Q psy4417 5 PHPLKKILGTGL-SPCGLTVEQDAN--GNLIIARILAGSLIDKQG-VLKVGDVILGVNGENV--SSPEDLQIEVVKSDG- 77 (440)
Q Consensus 5 ~~~r~v~l~r~g-~~lGiti~~~~~--~~i~V~~V~~gs~A~~~G-~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~~- 77 (440)
...+.+.+.+.. .+|||++.++.+ .+++|..|.++|||+++| +|+.||+|++|||.++ .++.++..+|+..++
T Consensus 16 ~~~~~v~l~~~~~~~~G~~~~gg~~~~~~~~V~~V~~~spA~~aG~rL~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~~ 95 (107)
T 3nfk_A 16 DNLVLIRMKPDENGRFGFNVKGGYDQKMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASCER 95 (107)
T ss_dssp CCCEEEEECCCTTSCCCEEEEEEGGGTEEEEEEEECTTSHHHHSSSCCCTTCEEEEETTEECTTCCHHHHHHHHHCGGGS
T ss_pred CCEEEEEEEcCCCCCCCEEEEccCCCCCCeEEEEECCCCchHHcCCccCCCCEEEEECCEECCCCCHHHHHHHHHhcccc
Confidence 446778887766 799999998654 359999999999999999 5999999999999999 588999999987764
Q ss_pred ---ceeeeecc
Q psy4417 78 ---NIQFTIAP 85 (440)
Q Consensus 78 ---~v~l~v~p 85 (440)
.+.|+|.+
T Consensus 96 ~~~~v~l~v~r 106 (107)
T 3nfk_A 96 HSGELMLLVRP 106 (107)
T ss_dssp BTTBEEEEEEC
T ss_pred CCcEEEEEEEc
Confidence 88888865
No 125
>1uti_A GRB2-related adaptor protein 2; signaling protein regulator, SH3 domain/complex, adaptor protein (MONA); 1.5A {Mus musculus} SCOP: b.34.2.1 PDB: 1h3h_A 1oeb_A 2w10_A 2d0n_A
Probab=99.03 E-value=1.2e-10 Score=85.10 Aligned_cols=53 Identities=26% Similarity=0.825 Sum_probs=48.0
Q ss_pred ccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHH
Q psy4417 98 CYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELE 160 (440)
Q Consensus 98 ~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~ 160 (440)
.+++|++||.+..++ +|+|++||++.|++..+++||.++. ++..|+||++++.
T Consensus 2 ~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv~ 54 (58)
T 1uti_A 2 RWARALYDFEALEED-------ELGFRSGEVVEVLDSSNPSWWTGRL---HNKLGLFPANYVA 54 (58)
T ss_dssp CEEEESSCBCCCSTT-------BCCBCTTCEEEEEECCSSSEEEEEE---TTEEEEEEGGGEE
T ss_pred eEEEECccCCCCCcC-------CCCCCCCCEEEEEEECCCCEEEEEE---CCeEEEeeHHHeE
Confidence 468899999998876 9999999999999999999999998 4789999999975
No 126
>1w70_A Neutrophil cytosol factor 4; NADPH oxidase, P40PHOX, P47PHOX, SH3 domain, polyproline; 1.46A {Homo sapiens} PDB: 1w6x_A
Probab=99.03 E-value=1.2e-10 Score=85.83 Aligned_cols=54 Identities=20% Similarity=0.511 Sum_probs=48.7
Q ss_pred cccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHH
Q psy4417 97 VCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELE 160 (440)
Q Consensus 97 ~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~ 160 (440)
.+.++|++||.+..++ +|+|++||++.|++..+++||.++. ++..|+||+++++
T Consensus 4 ~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~W~~g~~---~g~~G~~P~~yv~ 57 (60)
T 1w70_A 4 HMRAEALFDFTGNSKL-------ELNFKAGDVIFLLSRINKDWLEGTV---RGATGIFPLSFVK 57 (60)
T ss_dssp SCEEEESSCBCCSSTT-------BCCBCTTCEEEEEEECSSSEEEEEE---TTEEEEEEGGGEE
T ss_pred CcEEEECccCCcCCCC-------CccCCCCCEEEEEEeCCCCeEEEEE---CCCEEEechHHEE
Confidence 4678999999998877 9999999999999998999999997 4789999999874
No 127
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.03 E-value=1e-09 Score=92.31 Aligned_cols=80 Identities=18% Similarity=0.306 Sum_probs=65.5
Q ss_pred CeEEEEeeCCCCccEEEEecCC---CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhc----CC
Q psy4417 7 PLKKILGTGLSPCGLTVEQDAN---GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKS----DG 77 (440)
Q Consensus 7 ~r~v~l~r~g~~lGiti~~~~~---~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~----~~ 77 (440)
.+.+.+.+. .+|||+|.++.+ +.++|.+|.++|||+++|.|+.||+|++|||.++ .+++++..+|+.. +.
T Consensus 19 ~~~~~~~~~-~glG~~i~gg~~~~~~~i~I~~V~~gspA~~aggL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~~~g~ 97 (118)
T 1v6b_A 19 VRLLRIKKE-GSLDLALEGGVDSPVGKVVVSAVYEGGAAERHGGVVKGDEIMAINGKIVTDYTLAEAEAALQKAWNQGGD 97 (118)
T ss_dssp EEEEEEESC-SCCCCEEEEBTTSSSCSEEEEECCTTSHHHHHCSSCTTCEEEEESSCBCTTCBHHHHHHHHHHHHHHTCS
T ss_pred EEEEEECCC-CccCEEEEcccCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhhcCCC
Confidence 344555555 489999998754 4499999999999999944999999999999999 5699999999865 67
Q ss_pred ceeeeeccCC
Q psy4417 78 NIQFTIAPQG 87 (440)
Q Consensus 78 ~v~l~v~p~~ 87 (440)
.++|+|...+
T Consensus 98 ~v~l~v~r~~ 107 (118)
T 1v6b_A 98 WIDLVVAVCP 107 (118)
T ss_dssp EEEEEEECCC
T ss_pred eEEEEEEeCC
Confidence 8999887643
No 128
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=99.03 E-value=7.2e-10 Score=87.92 Aligned_cols=79 Identities=22% Similarity=0.319 Sum_probs=65.0
Q ss_pred CCCCeEEEEeeCCCCccEEEEecCC-CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHh--cCCc
Q psy4417 4 PPHPLKKILGTGLSPCGLTVEQDAN-GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVK--SDGN 78 (440)
Q Consensus 4 ~~~~r~v~l~r~g~~lGiti~~~~~-~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~--~~~~ 78 (440)
|++.+.|++.|+..+|||++.+..+ .+++|..+ ++|||+ +| |+.||.|++|||.++ .+++++..+|+. .+..
T Consensus 1 s~~~~~v~l~k~~~g~G~~~~~~~~~~~~~v~~v-~~spA~-aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~ 77 (88)
T 3bpu_A 1 SMELITVHIVKGPMGFGFTIADSPGGGGQRVKQI-VDSPRS-RG-LKEGDLIVEVNKKNVQALTHNQVVDMLVESPKGSE 77 (88)
T ss_dssp CEEEEEEEEECBTTBSSCEEEECTTSSSEEEEEC-CC--CC-TT-CCTTCEEEEETTEECTTSCHHHHHHHHHTSCTTCE
T ss_pred CCcEEEEEEEcCCCceeEEEEecCCCCcEEEEEe-cCChhH-hC-CCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCCCE
Confidence 4577889999999999999997644 56888887 999999 88 999999999999999 457999999985 4678
Q ss_pred eeeeecc
Q psy4417 79 IQFTIAP 85 (440)
Q Consensus 79 v~l~v~p 85 (440)
+.|.+..
T Consensus 78 v~l~v~R 84 (88)
T 3bpu_A 78 VTLLVQR 84 (88)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 8888764
No 129
>1jo8_A ABP1P, actin binding protein; SH3 domain actin-binding-protein, structural protein; 1.30A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 2k3b_A 2rpn_A
Probab=99.03 E-value=1.7e-10 Score=84.44 Aligned_cols=54 Identities=30% Similarity=0.623 Sum_probs=48.0
Q ss_pred cccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHH
Q psy4417 99 YMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELE 160 (440)
Q Consensus 99 ~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~ 160 (440)
.++|++||.+..++ +|+|++||++.|++..+.+||.++... ++..|+||+++++
T Consensus 2 ~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~~~-~g~~G~~P~~yv~ 55 (58)
T 1jo8_A 2 WATAEYDYDAAEDN-------ELTFVENDKIINIEFVDDDWWLGELEK-DGSKGLFPSNYVS 55 (58)
T ss_dssp CEEESSCBCCCSTT-------BCCBCTTCEEEEEECCSSSEEEEEETT-TCCEEEEEGGGEE
T ss_pred EEEECceECCCCCC-------CcccCCCCEEEEEEecCCCcEEEEECC-CCCEEEechHHeE
Confidence 46899999998877 999999999999999999999999853 3789999999874
No 130
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=99.03 E-value=7.6e-10 Score=90.97 Aligned_cols=79 Identities=24% Similarity=0.300 Sum_probs=68.8
Q ss_pred CeEEEEeeCC-CCccEEEEecCC-CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcCCceeee
Q psy4417 7 PLKKILGTGL-SPCGLTVEQDAN-GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSDGNIQFT 82 (440)
Q Consensus 7 ~r~v~l~r~g-~~lGiti~~~~~-~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~~~v~l~ 82 (440)
||.+.+.|.. ..+||.+..+.+ .+++|..|.++|||+++| |+.||.|++|||.++ .++.++..+++..++.+.|+
T Consensus 2 ~r~v~l~~~~~~~~G~~l~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~ 80 (106)
T 3ngh_A 2 PRESKLSKQEGQNYGFFLRIEKDTDGHLIRVIEEGSPAEKAG-LLDGDRVLRINGVFVDKEEHAQVVELVRKSGNSVTLL 80 (106)
T ss_dssp CEEEEEECCTTCCCCCEEECCTTCCSCEEECCCTTSHHHHTT-CCTTCEEEEETTEECTTSCHHHHHHHHHHTTTEEEEE
T ss_pred CEEEEEEeCCCCeeCEEEEEEeCCCCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCEEEEE
Confidence 6788888865 799999987654 468999999999999999 999999999999999 56779999999888899998
Q ss_pred eccC
Q psy4417 83 IAPQ 86 (440)
Q Consensus 83 v~p~ 86 (440)
+...
T Consensus 81 v~r~ 84 (106)
T 3ngh_A 81 VLDG 84 (106)
T ss_dssp EECH
T ss_pred EEEC
Confidence 8753
No 131
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=99.03 E-value=1.1e-09 Score=89.67 Aligned_cols=80 Identities=13% Similarity=0.219 Sum_probs=67.8
Q ss_pred CCCCeEEEEeeCCCCccEEEEecC----------CCcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHH
Q psy4417 4 PPHPLKKILGTGLSPCGLTVEQDA----------NGNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIE 71 (440)
Q Consensus 4 ~~~~r~v~l~r~g~~lGiti~~~~----------~~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~ 71 (440)
..+...+.+.+++ +|||++.++. ..+++|..|.++|||++ | |+.||.|++|||.++ .++.++..+
T Consensus 9 ~~~~~~v~l~~~~-~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-g-L~~GD~I~~vng~~v~~~~~~~~~~~ 85 (103)
T 1n7t_A 9 AKQEIRVRVEKDP-ELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVSL 85 (103)
T ss_dssp SCCCEEEEEECSS-CCCBEEEECTTSSBCSSCSSCCSEECCCBSSSSTTSS-S-CCTTCEEEEETTEECSSCCHHHHHHH
T ss_pred ccEEEEEEEccCC-CccEEEEcccCCCCCccccCCCCEEEEEECCCCchHH-C-CCCCCEEEEECCEECCCCCHHHHHHH
Confidence 4555667777765 8999999854 24699999999999999 8 999999999999999 568999999
Q ss_pred HHhcCCceeeeeccC
Q psy4417 72 VVKSDGNIQFTIAPQ 86 (440)
Q Consensus 72 L~~~~~~v~l~v~p~ 86 (440)
++..+..+.|.|...
T Consensus 86 ~~~~g~~v~l~v~R~ 100 (103)
T 1n7t_A 86 LKTFQNTVELIIVRE 100 (103)
T ss_dssp HHHCCSEEEEEEECC
T ss_pred hhcCCCeEEEEEEec
Confidence 988888999988764
No 132
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.03 E-value=1.4e-09 Score=91.34 Aligned_cols=82 Identities=17% Similarity=0.318 Sum_probs=69.5
Q ss_pred CCCeEEEEeeCCC-CccEEEEecCC--CcEEEEEEcCCChhhhc--CCCCCCCEEEeECCccC--CCHHHHHHHHHhcC-
Q psy4417 5 PHPLKKILGTGLS-PCGLTVEQDAN--GNLIIARILAGSLIDKQ--GVLKVGDVILGVNGENV--SSPEDLQIEVVKSD- 76 (440)
Q Consensus 5 ~~~r~v~l~r~g~-~lGiti~~~~~--~~i~V~~V~~gs~A~~~--G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~- 76 (440)
.+++.|.+.|+.. +|||++.++.+ .+++|..|.++|||+++ | |+.||+|++|||.++ .++.++..+++..+
T Consensus 14 ~~~~~v~l~k~~~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~a~gG-L~~GD~Il~ing~~v~~~~~~~~~~~~~~~~~ 92 (119)
T 2cs5_A 14 DNLVLIRMKPDENGRFGFNVKGGYDQKMPVIVSRVAPGTPADLCVPR-LNEGDQVVLINGRDIAEHTHDQVVLFIKASCE 92 (119)
T ss_dssp SCCEEEEECCCSSSCCSEEEEEEGGGTEEEEEEEECSSSTTTSSSSC-CCTTCEEEEETTBCTTSSCHHHHHHHHHHHHH
T ss_pred CCeEEEEEEeCCCCCcCEEEecccCCCCCeEEEEECCCCHHHHhhcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhccc
Confidence 4577889988664 59999998754 35999999999999999 7 999999999999999 67999999998774
Q ss_pred ---CceeeeeccCC
Q psy4417 77 ---GNIQFTIAPQG 87 (440)
Q Consensus 77 ---~~v~l~v~p~~ 87 (440)
..+.|.|.+..
T Consensus 93 ~~~~~v~l~v~R~~ 106 (119)
T 2cs5_A 93 RHSGELMLLVRPNA 106 (119)
T ss_dssp CCSSCEEEEEECCC
T ss_pred cCCCEEEEEEEccc
Confidence 47888887653
No 133
>2drm_A Acanthamoeba myosin IB; SH3 domain, contractIle protein; 1.35A {Acanthamoeba} PDB: 2drk_A
Probab=99.03 E-value=1.5e-10 Score=84.67 Aligned_cols=54 Identities=26% Similarity=0.684 Sum_probs=48.8
Q ss_pred cccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHH
Q psy4417 97 VCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELE 160 (440)
Q Consensus 97 ~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~ 160 (440)
...++|+++|.+..++ +|+|++||++.|++..+.+||.++. ++..|+||+++++
T Consensus 3 ~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~W~~g~~---~g~~G~~P~~yv~ 56 (58)
T 2drm_A 3 GIQVKALYDYDAQTGD-------ELTFKEGDTIIVHQKDPAGWWEGEL---NGKRGWVPANYVQ 56 (58)
T ss_dssp CEEEEESSCBCCCSTT-------BCCBCTTCEEEEEECCTTSEEEEEE---TTEEEEEEGGGEE
T ss_pred CcEEEECccCCCCCcC-------CcCCCCCCEEEEEEecCCCEEEEEE---CCcEEEEeHHHEE
Confidence 4568999999998877 9999999999999999999999998 5789999999874
No 134
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.03 E-value=3.5e-10 Score=94.00 Aligned_cols=85 Identities=26% Similarity=0.403 Sum_probs=74.4
Q ss_pred CCCCCCeEEEEeeCCCCccEEEEecCC-CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcCCc
Q psy4417 2 EHPPHPLKKILGTGLSPCGLTVEQDAN-GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSDGN 78 (440)
Q Consensus 2 ~~~~~~r~v~l~r~g~~lGiti~~~~~-~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~~~ 78 (440)
+.+++++.|.+.|...+|||++.++.+ .+++|..|.+++||+++|.|+.||+|++|||+++ .++.++..+++..++.
T Consensus 11 ~~~~~~~~v~l~k~~~glG~~l~~~~~~~gv~V~~V~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~~~~~~~~ 90 (113)
T 1um7_A 11 GDAREPRKIILHKGSTGLGFNIVGGEDGEGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALKRAGQS 90 (113)
T ss_dssp CCCCSEEEEEEECCSSCSSBCCBCCSTTCCCBCCCBCSSSHHHHTTCCCTTCEEEEESSCBCTTCCHHHHHHHHHSCCSE
T ss_pred cCCCceEEEEEEECCCcccEEEEeccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCc
Confidence 346788999999999999999987654 5699999999999999999999999999999999 5678888888888888
Q ss_pred eeeeeccC
Q psy4417 79 IQFTIAPQ 86 (440)
Q Consensus 79 v~l~v~p~ 86 (440)
+.|.|...
T Consensus 91 v~l~v~r~ 98 (113)
T 1um7_A 91 VTIVAQYR 98 (113)
T ss_dssp EEEEEECC
T ss_pred EEEEEEEC
Confidence 88888654
No 135
>2fei_A CD2-associated protein; CMS SH3 domain, structural protein; NMR {Homo sapiens}
Probab=99.03 E-value=8.2e-11 Score=88.32 Aligned_cols=54 Identities=31% Similarity=0.701 Sum_probs=48.6
Q ss_pred ccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 98 CYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 98 ~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
.+++|+|||.+..++ +|+|++||++.|++..+++||.++. ++..|+||++|+..
T Consensus 2 ~~~~Alydy~~~~~~-------eLs~~~Gd~i~v~~~~~~gWw~g~~---~g~~G~fP~~yv~~ 55 (65)
T 2fei_A 2 RQCKVLFEYIPQNED-------ELELKVGDIIDINEEVEEGWWSGTL---NNKLGLFPSNFVKE 55 (65)
T ss_dssp CEEECSSCCCCCSTT-------BCCCCTTCEEECCCCSSSSEEEEES---SSCEEEEETTTSCB
T ss_pred eEEEECccCCcCCcC-------ccCCCCCCEEEEEEecCCCEEEEEE---CCcEEEecHHHEEE
Confidence 367899999998877 9999999999999999999999986 57899999999864
No 136
>2bz8_A SH3-domain kinase binding protein 1; SH3 domain, CIN85 adaptor protein, CBL ubiquitin ligase; 2.0A {Homo sapiens}
Probab=99.02 E-value=1.5e-10 Score=84.67 Aligned_cols=54 Identities=28% Similarity=0.635 Sum_probs=48.4
Q ss_pred ccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 98 CYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 98 ~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
+.++|+|+|.+..++ +|+|++||++.|++..+++||.++. ++..|+||++++..
T Consensus 2 ~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv~~ 55 (58)
T 2bz8_A 2 VEAIVEFDYQAQHDD-------ELTISVGEIITNIRKEDGGWWEGQI---NGRRGLFPDNFVRE 55 (58)
T ss_dssp CCEEESSCBCCCSTT-------BCCBCTTCEEEEEECCTTTEEEEEE---TTEEEEEEGGGEEE
T ss_pred EEEEECcccCCCCcC-------EeeECCCCEEEEEEeCCCCEEEEEE---CCeEEEEehHHeEE
Confidence 457899999998877 9999999999999999999999997 57899999999753
No 137
>1uj0_A Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2; STAM, SH3, GRB2, GADS, PXXP, HRS, endocytosis, early endosome, signaling protein/signaling protein complex; 1.70A {Mus musculus} SCOP: b.34.2.1
Probab=99.02 E-value=1.2e-10 Score=86.51 Aligned_cols=56 Identities=32% Similarity=0.718 Sum_probs=49.5
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
...+++|+|+|.+..++ +|+|++||++.|++..+++||.++.. +..|+||++++..
T Consensus 4 ~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~~---g~~G~~P~~yv~~ 59 (62)
T 1uj0_A 4 MARRVRALYDFEAVEDN-------ELTFKHGELITVLDDSDANWWQGENH---RGTGLFPSNFVTT 59 (62)
T ss_dssp CCEEEEESSCBCCCSTT-------BCCBCTTCEEEEEECCSSSEEEEEET---TEEEEEEGGGEES
T ss_pred CCeEEEECccCCCCCcC-------CcCCCCCCEEEEEEeCCCCEEEEEEC---CCEEEechhHEEE
Confidence 34578999999998877 99999999999999999999999984 5699999999864
No 138
>2ew3_A SH3-containing GRB2-like protein 3; SH3GL3, solution structure, signaling protein; NMR {Homo sapiens}
Probab=99.02 E-value=1.3e-10 Score=87.96 Aligned_cols=56 Identities=30% Similarity=0.648 Sum_probs=50.0
Q ss_pred cccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHHh
Q psy4417 97 VCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEER 162 (440)
Q Consensus 97 ~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~r 162 (440)
..+++|+|||.+..++ +|+|++||++.|++..+++||.++. ++..|+||++++...
T Consensus 3 ~~~~~Alydy~~~~~~-------eLsf~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv~~~ 58 (68)
T 2ew3_A 3 QPCCRGLYDFEPENQG-------ELGFKEGDIITLTNQIDENWYEGMI---HGESGFFPINYVEVI 58 (68)
T ss_dssp CCEEEESSCBCCCSTT-------BCCBCTTCEEEEEEESSSSEEEEEE---TTEEEEEEGGGEEES
T ss_pred CCEEEEeeeECCCCCC-------ccCCCCCCEEEEEEecCCCEEEEEE---CCcEEEeeHHHEEEc
Confidence 4578999999998877 9999999999999998999999997 578999999998653
No 139
>1cka_A C-CRK N-terminal SH3 domain; complex (oncogene protein/peptide); 1.50A {Mus musculus} SCOP: b.34.2.1 PDB: 1ckb_A 1m3c_A 1m30_A 1m3b_A 1m3a_A
Probab=99.02 E-value=1.3e-10 Score=84.58 Aligned_cols=53 Identities=34% Similarity=0.832 Sum_probs=47.6
Q ss_pred cccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHH
Q psy4417 99 YMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELE 160 (440)
Q Consensus 99 ~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~ 160 (440)
+++|++||.+..++ +|+|++||++.|++..+++||.++.. ++..|+||+++++
T Consensus 3 ~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~~--~g~~G~~P~~yv~ 55 (57)
T 1cka_A 3 YVRALFDFNGNDEE-------DLPFKKGDILRIRDKPEEQWWNAEDS--EGKRGMIPVPYVE 55 (57)
T ss_dssp EEEESSCBCCSSTT-------BCCBCTTCEEEEEECSSSSEEEEECT--TSCEEEEEGGGEE
T ss_pred EEEECCcCCCCCCC-------CCCCCCCCEEEEEEecCCCcEEEEeC--CCCEEEEeHHHEE
Confidence 57899999998877 99999999999999999999999954 3789999999874
No 140
>2eyx_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH3, signaling protein; NMR {Homo sapiens}
Probab=99.02 E-value=1.4e-10 Score=87.45 Aligned_cols=56 Identities=18% Similarity=0.398 Sum_probs=48.9
Q ss_pred ccccccccccCCCC--CCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 96 PVCYMRCLFTYDPK--EDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 96 ~~~~vRal~dy~p~--~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
.+.+++|+|+|.+. .+. +|+|++||++.|+++.+.+||.++. ++..|+||++++..
T Consensus 5 ~~~~~~alydy~~~~~~~~-------eLs~~~Gd~i~v~~~~~~gWw~g~~---~g~~G~fP~~yv~~ 62 (67)
T 2eyx_A 5 GPIYARVIQKRVPNAYDKT-------ALALEVGELVKVTKINVSGQWEGEC---NGKRGHFPFTHVRL 62 (67)
T ss_dssp CSCBEEECCCBCCCTTCSS-------BCCBCSSEEEEEEEECTTSEEEEEE---TTEEEEEEGGGBCC
T ss_pred CCEEEEEeEEECCCCCCCC-------ccccCCCCEEEEEEecCCCEEEEEE---CCCEEEEehHhEEE
Confidence 44688999999997 554 9999999999999999999999977 47899999999853
No 141
>2ak5_A RHO guanine nucleotide exchange factor 7; adaptor proteins, CIN85, PIX/COOL, protein-protein interaction, X-RAY, endocytosis; 1.85A {Rattus norvegicus} PDB: 1zsg_A
Probab=99.02 E-value=1.4e-10 Score=86.52 Aligned_cols=56 Identities=23% Similarity=0.637 Sum_probs=49.9
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
...+++|+|+|.+..+. +|+|++||++.|++..+.+||.++. ++..|+||++++..
T Consensus 5 ~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv~~ 60 (64)
T 2ak5_A 5 SQLVVRAKFNFQQTNED-------ELSFSKGDVIHVTRVEEGGWWEGTH---NGRTGWFPSNYVRE 60 (64)
T ss_dssp CCCEEEESSCBCCCSTT-------BCCBCTTCEEEEEECCTTSEEEEEE---TTEEEEEEGGGEEE
T ss_pred CCEEEEEccccCCcCcC-------cccCCCCCEEEEeEecCCCEEEEEE---CCCEEEEehHHeEE
Confidence 45689999999998776 9999999999999999999999997 57899999999753
No 142
>1sem_A SEM-5; SRC-homology 3 (SH3) domain, peptide-binding protein; 2.00A {Caenorhabditis elegans} SCOP: b.34.2.1 PDB: 2sem_A 3sem_A 1k76_A 1kfz_A
Probab=99.02 E-value=1.6e-10 Score=84.50 Aligned_cols=53 Identities=38% Similarity=0.931 Sum_probs=48.1
Q ss_pred ccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHH
Q psy4417 98 CYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELE 160 (440)
Q Consensus 98 ~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~ 160 (440)
.+++|+++|.+..+. +|+|++||++.|++..+++||.++. ++..|+||++++.
T Consensus 3 ~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv~ 55 (58)
T 1sem_A 3 KFVQALFDFNPQESG-------ELAFKRGDVITLINKDDPNWWEGQL---NNRRGIFPSNYVC 55 (58)
T ss_dssp CEEEESSCBCCSSTT-------BCCBCTTCEEEEEECSSSSEEEEEE---TTEEEEEEGGGEE
T ss_pred eEEEECcCCCCCCCC-------CcCCCCCCEEEEEEecCCCEEEEEE---CCcEEEechHHeE
Confidence 568999999998776 9999999999999999999999998 4789999999874
No 143
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=99.02 E-value=1.5e-09 Score=85.93 Aligned_cols=72 Identities=17% Similarity=0.418 Sum_probs=63.0
Q ss_pred eCCCCccEEEEecCC--CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccCCC--HHHHHHHHHhcCCceeeeeccC
Q psy4417 14 TGLSPCGLTVEQDAN--GNLIIARILAGSLIDKQGVLKVGDVILGVNGENVSS--PEDLQIEVVKSDGNIQFTIAPQ 86 (440)
Q Consensus 14 r~g~~lGiti~~~~~--~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v~t--~~e~~~~L~~~~~~v~l~v~p~ 86 (440)
+++.+|||++.++.+ .+++|..|.++|||+++| |+.||.|++|||.++.+ ++++..+|+...+.+.|.+...
T Consensus 9 ~~~~~lG~~l~~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~R~ 84 (87)
T 2pa1_A 9 AGPAPWGFRITGGRDFHTPIMVTKVAERGKAKDAD-LRPGDIIVAINGESAEGMLHAEAQSKIRQSPSPLRLQLDRI 84 (87)
T ss_dssp CSSSCCSEEEEEEGGGTEEEEEEEECSSSHHHHTT-CCTTCEEEEETTEESTTCCHHHHHHHHHTCCSSEEEEEEEC
T ss_pred CCCCccCEEEecccCCCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEec
Confidence 566799999998754 469999999999999999 99999999999999944 9999999998778888888654
No 144
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=99.02 E-value=1.1e-09 Score=89.78 Aligned_cols=79 Identities=15% Similarity=0.168 Sum_probs=67.4
Q ss_pred CCCCeEEEEeeC-CCCccEEEEec---------CCCcEEEEEEcCCChhhhcCCCCCCCEEEeECCccCC--CHHHHHHH
Q psy4417 4 PPHPLKKILGTG-LSPCGLTVEQD---------ANGNLIIARILAGSLIDKQGVLKVGDVILGVNGENVS--SPEDLQIE 71 (440)
Q Consensus 4 ~~~~r~v~l~r~-g~~lGiti~~~---------~~~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v~--t~~e~~~~ 71 (440)
...++.+.+.|. +.+|||++.+. ...+++|..|.++|||+++| |+.||.|++|||.++. +++++..+
T Consensus 13 ~~~~~~v~l~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~ 91 (104)
T 2z17_A 13 WSQRKLVTVEKQDNETFGFEIQSYRPQNQNACSSEMFTLICKIQEDSPAHCAG-LQAGDVLANINGVSTEGFTYKQVVDL 91 (104)
T ss_dssp CSCCCEEEEECCTTSCCSEEEEECCCCCCSSSCCSCCEEEEEECTTSHHHHHT-CCTTCBCCEETTEECTTCCHHHHHHH
T ss_pred CCcceEEEEEeCCCCCccEEEEeeecccCCcccCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHH
Confidence 355677888886 56899999972 12469999999999999999 9999999999999995 99999999
Q ss_pred HHhcCCceeeee
Q psy4417 72 VVKSDGNIQFTI 83 (440)
Q Consensus 72 L~~~~~~v~l~v 83 (440)
|+..++.+.|.|
T Consensus 92 l~~~~~~v~l~v 103 (104)
T 2z17_A 92 IRSSGNLLTIET 103 (104)
T ss_dssp HHHTTTEEEEEC
T ss_pred HHhCCCcEEEEE
Confidence 998877777765
No 145
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=99.01 E-value=4.1e-10 Score=96.02 Aligned_cols=78 Identities=26% Similarity=0.408 Sum_probs=66.5
Q ss_pred EEEe-eCCCCccEEEEecCC------CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhc-----
Q psy4417 10 KILG-TGLSPCGLTVEQDAN------GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKS----- 75 (440)
Q Consensus 10 v~l~-r~g~~lGiti~~~~~------~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~----- 75 (440)
+.+. +...+|||+|.++.+ .+++|..|.++|||+++|+|+.||+|++|||.++ .+++++..+|+.+
T Consensus 29 v~l~k~~~~glG~~i~~~~~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~g 108 (127)
T 1wg6_A 29 IPLNDSGSAGLGVSLKGNKSRETGTDLGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLGKSNHEAMETLRRSMSMEG 108 (127)
T ss_dssp EECSSSTTTCCCCEEEEEEETTTTEEEEEEEEECCSSSSTHHHHTSCSCCBEEEETTEESTTSCHHHHHHHHHHHHHHHH
T ss_pred EEEeeCCCCccCeEEecccCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhcccc
Confidence 3443 567899999998653 3699999999999999999999999999999999 6799999999965
Q ss_pred --CCceeeeeccCC
Q psy4417 76 --DGNIQFTIAPQG 87 (440)
Q Consensus 76 --~~~v~l~v~p~~ 87 (440)
++.+.|+|....
T Consensus 109 ~~~~~v~l~v~R~~ 122 (127)
T 1wg6_A 109 NIRGMIQLVILRRS 122 (127)
T ss_dssp HHTCEEEEEEEECS
T ss_pred CCCCEEEEEEEeCC
Confidence 788999987654
No 146
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=99.01 E-value=1.4e-09 Score=87.81 Aligned_cols=79 Identities=16% Similarity=0.220 Sum_probs=67.6
Q ss_pred CCeEEEEee-CCCCccEEEEecCCCcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcCCceeee
Q psy4417 6 HPLKKILGT-GLSPCGLTVEQDANGNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSDGNIQFT 82 (440)
Q Consensus 6 ~~r~v~l~r-~g~~lGiti~~~~~~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~~~v~l~ 82 (440)
+...+.+.+ .+.+||+++.+ ...+++|..|.++|||+++|+|+.||.|++|||.++ .++.++..+++..++.+.|.
T Consensus 8 ~~~~v~l~~~~~~glG~~~~~-~~~gv~V~~V~~~spA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~~~~~~~~v~l~ 86 (96)
T 2qkv_A 8 EKFNVDLMKKAGKELGLSLSP-NEIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVSYALFKGANGKVSME 86 (96)
T ss_dssp CCEEEEEECBTTBCCCEEEEE-CSSSEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEE
T ss_pred ceEEEEEEeCCCCCccEEEEe-CCCcEEEEEeCCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCcEEEE
Confidence 345677754 67799999987 346699999999999999999999999999999999 57888999999888889988
Q ss_pred ecc
Q psy4417 83 IAP 85 (440)
Q Consensus 83 v~p 85 (440)
|..
T Consensus 87 v~R 89 (96)
T 2qkv_A 87 VTR 89 (96)
T ss_dssp EEC
T ss_pred EEe
Confidence 865
No 147
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=99.01 E-value=1.2e-09 Score=93.61 Aligned_cols=71 Identities=24% Similarity=0.323 Sum_probs=62.0
Q ss_pred CCCccEEEEecCC-----CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcC--CceeeeeccC
Q psy4417 16 LSPCGLTVEQDAN-----GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSD--GNIQFTIAPQ 86 (440)
Q Consensus 16 g~~lGiti~~~~~-----~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~--~~v~l~v~p~ 86 (440)
+.+|||+|.++.+ .+++|..|.++|||+++|+|+.||+|++|||+++ .+++++..+|+... +.+.|+|...
T Consensus 47 ~~~lG~~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 126 (131)
T 1wfg_A 47 GAMLGLKVVGGKMTESGRLCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGATFEEVYNIILESKPEPQVELVVSRS 126 (131)
T ss_dssp CTTTTEEEEEEEECSSSCEEEEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTCCHHHHHHHHHHTSSSSEEEEEEEEE
T ss_pred CCCCCEEEecCccCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEcC
Confidence 6799999987543 2699999999999999999999999999999999 67999999999764 7888888653
No 148
>2nwm_A Vinexin; cell adhesion; NMR {Homo sapiens}
Probab=99.01 E-value=1.7e-10 Score=86.55 Aligned_cols=53 Identities=26% Similarity=0.562 Sum_probs=48.1
Q ss_pred cccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 99 YMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 99 ~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
+++|+|||.+..++ +|+|++||++.|++..+.+||.++. ++..|+||++|+..
T Consensus 3 ~~~alydy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~fP~~yv~~ 55 (65)
T 2nwm_A 3 AARLKFDFQAQSPK-------ELTLQKGDIVYIHKEVDKNWLEGEH---HGRLGIFPANYVEV 55 (65)
T ss_dssp EEEECSCBCCCSTT-------BCCBCTTCEEEEEECCTTTCEEEEE---TTEEEEECGGGEEE
T ss_pred EEEEeeeECCCCcC-------ccCCcCCCEEEEEEecCCCEEEEEE---CCcEEEEehhhEEE
Confidence 57899999998877 9999999999999999999999996 57899999999864
No 149
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=99.01 E-value=7.8e-10 Score=87.02 Aligned_cols=76 Identities=25% Similarity=0.407 Sum_probs=64.3
Q ss_pred eEEEEeeCCCCccEEEEecCC--CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcCCceeeee
Q psy4417 8 LKKILGTGLSPCGLTVEQDAN--GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSDGNIQFTI 83 (440)
Q Consensus 8 r~v~l~r~g~~lGiti~~~~~--~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~~~v~l~v 83 (440)
..|++ +.+.+|||++.++.+ .+++|..|.++|||+++| |+.||.|++|||.++ .++.++..+++..++.+.|.+
T Consensus 3 ~~v~l-~~~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v 80 (85)
T 1rgw_A 3 YSVTL-TGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQ-LSQGDLVVAIDGVNTDTMTHLEAQNKIKSASYNLSLTL 80 (85)
T ss_dssp EEEEE-CCSSCCCEEECCCGGGTSCCBEEEECTTSHHHHSS-CCCCSBEEEETTEECTTCCHHHHHHHHTTCSSCEEEEE
T ss_pred EEEEE-eCCCccCEEEEeccCCCCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHHcCCCeEEEEE
Confidence 45677 456799999987654 458999999999999999 999999999999999 556899988887788888888
Q ss_pred cc
Q psy4417 84 AP 85 (440)
Q Consensus 84 ~p 85 (440)
..
T Consensus 81 ~R 82 (85)
T 1rgw_A 81 QK 82 (85)
T ss_dssp ES
T ss_pred Ee
Confidence 64
No 150
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.01 E-value=2.1e-09 Score=88.99 Aligned_cols=83 Identities=16% Similarity=0.279 Sum_probs=70.1
Q ss_pred CCCCeEEEEeeCCCCccEEEEecC--------CCcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHH
Q psy4417 4 PPHPLKKILGTGLSPCGLTVEQDA--------NGNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVV 73 (440)
Q Consensus 4 ~~~~r~v~l~r~g~~lGiti~~~~--------~~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~ 73 (440)
+.+...+.+.+...+|||++.++. ..+++|..|.++|||+++| |+.||.|++|||.++ .++.++...++
T Consensus 13 ~~~~~~~~l~~~~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~ 91 (110)
T 1x5q_A 13 EEEELTLTILRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAG-VRVGDKLLEVNGVALQGAEHHEAVEALR 91 (110)
T ss_dssp CCEEEEEEEECSSSSCSEEEEECTTSCCSSTTCCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred CcceEEEEEecCCCeeeEEEEccccCCccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHhh
Confidence 455667888888889999999753 2569999999999999999 999999999999999 45777777777
Q ss_pred hcCCceeeeeccCC
Q psy4417 74 KSDGNIQFTIAPQG 87 (440)
Q Consensus 74 ~~~~~v~l~v~p~~ 87 (440)
..+..+.|.|....
T Consensus 92 ~~g~~v~l~v~R~g 105 (110)
T 1x5q_A 92 GAGTAVQMRVWRES 105 (110)
T ss_dssp SCCSEEEEEEEECS
T ss_pred CCCCeEEEEEEECC
Confidence 78889999987643
No 151
>2b86_A Cytoplasmic protein NCK2; NCK SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2js2_A
Probab=99.01 E-value=1.4e-10 Score=87.65 Aligned_cols=55 Identities=22% Similarity=0.505 Sum_probs=48.1
Q ss_pred cccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 97 VCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 97 ~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
..+++|+|||.+..++ +|+|++||++.|++. +++||.++.. ++..|+||++++..
T Consensus 4 ~~~~~Alydy~a~~~~-------ELsf~~Gd~i~vl~~-~~~Ww~~~~~--~g~~G~~Psnyv~~ 58 (67)
T 2b86_A 4 EVIVIAKWDYTAQQDQ-------ELDIKKNERLWLLDD-SKTWWRVRNA--ANRTGYVPSNYVER 58 (67)
T ss_dssp CEEEEESSCBCCSSTT-------SCCBCTTCEEEEEEC-SSSSCEEECT--TSCEEECCCCSEEE
T ss_pred CeEEEEeeeECCCCCC-------ccccCCCCEEEEEec-CCCeEEEEeC--CCCEEEeChHHEeE
Confidence 4678999999998877 999999999999998 4799999865 47899999999854
No 152
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=99.01 E-value=2.1e-09 Score=86.72 Aligned_cols=80 Identities=16% Similarity=0.292 Sum_probs=67.0
Q ss_pred CCeEEEEeeCCCCccEEEEecC--------CCcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhc
Q psy4417 6 HPLKKILGTGLSPCGLTVEQDA--------NGNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKS 75 (440)
Q Consensus 6 ~~r~v~l~r~g~~lGiti~~~~--------~~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~ 75 (440)
+...+.+.+...+|||++.++. ..+++|..|.++|||+++| |+.||.|++|||.++ .+..++...++..
T Consensus 3 ~~~~v~~~~~~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~ 81 (97)
T 2w4f_A 3 EELTLTILRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAG-VRVGDKLLEVNGVALQGAEHHEAVEALRGA 81 (97)
T ss_dssp CEEEEEEECBTTBSSEEEEECTTSCCSBTTBCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTS
T ss_pred eEEEEEEEeCCCceeEEEECCccCCcccCCCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHhCC
Confidence 3456788888889999999753 2569999999999999999 999999999999999 4456666677778
Q ss_pred CCceeeeeccC
Q psy4417 76 DGNIQFTIAPQ 86 (440)
Q Consensus 76 ~~~v~l~v~p~ 86 (440)
+..+.|.|...
T Consensus 82 g~~v~l~v~R~ 92 (97)
T 2w4f_A 82 GTAVQMRVWRE 92 (97)
T ss_dssp CSEEEEEEECC
T ss_pred CCeEEEEEEeC
Confidence 88999998764
No 153
>2iim_A Proto-oncogene tyrosine-protein kinase LCK; beta-barrels, signaling protein; HET: PG4; 1.00A {Homo sapiens} SCOP: b.34.2.1 PDB: 1h92_A 1kik_A
Probab=99.01 E-value=2.6e-10 Score=84.61 Aligned_cols=56 Identities=34% Similarity=0.716 Sum_probs=48.3
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHH
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELE 160 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~ 160 (440)
...+++|+|||.+..++ +|+|++||++.|++..+ +||.++... ++..|+||+++++
T Consensus 5 ~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~-~Ww~g~~~~-~g~~G~~P~~yv~ 60 (62)
T 2iim_A 5 QDNLVIALHSYEPSHDG-------DLGFEKGEQLRILEQSG-EWWKAQSLT-TGQEGFIPFNFVA 60 (62)
T ss_dssp TTCEEEESSCBCCCSTT-------BCCBCTTCEEEEEECCS-SEEEEEETT-TCCEEEEEGGGEE
T ss_pred CCcEEEEcccCCCCCCC-------CcCCCCCCEEEEEEcCC-CEEEEEECC-CCCEEEEEHHHEE
Confidence 45678999999998877 99999999999999854 999999743 4789999999875
No 154
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=99.01 E-value=1.3e-09 Score=89.81 Aligned_cols=82 Identities=16% Similarity=0.223 Sum_probs=69.2
Q ss_pred CCCeEEEE--eeCCCCccEEEEecC-------CCcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHH
Q psy4417 5 PHPLKKIL--GTGLSPCGLTVEQDA-------NGNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVV 73 (440)
Q Consensus 5 ~~~r~v~l--~r~g~~lGiti~~~~-------~~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~ 73 (440)
.+...+.+ .+...+|||++.++. ..+++|..|.++|||+++|.|+.||.|++|||.++ .++.++..+++
T Consensus 11 ~~~~~v~l~r~~~~~~lG~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~ 90 (108)
T 2jre_A 11 FSLYSVELFREKDTSSLGISISGMRDQSTTGEATGIYVKSLIPGSAAALDGRIEPNDKILRVDDVNVQGMAQSDVVEVLR 90 (108)
T ss_dssp CEEEEEEEECCSTTSCCSEEEECCCCCSCSSCCCCCEEEEECTTSHHHHHSSCCSSEEEEEETTEECTTSCHHHHHHHHH
T ss_pred cEEEEEEEEecCCCCCcCEEEEcccCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 34566777 456779999998753 24699999999999999999999999999999999 45899999998
Q ss_pred hcCCceeeeeccC
Q psy4417 74 KSDGNIQFTIAPQ 86 (440)
Q Consensus 74 ~~~~~v~l~v~p~ 86 (440)
..+..+.|.|...
T Consensus 91 ~~g~~v~l~v~R~ 103 (108)
T 2jre_A 91 NAGNPVRLLLIRR 103 (108)
T ss_dssp HHCSEEEEEEEEC
T ss_pred cCCCeEEEEEEeC
Confidence 8888889988654
No 155
>2l0a_A STAM-1, signal transducing adapter molecule 1; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Homo sapiens}
Probab=99.01 E-value=1.5e-10 Score=88.72 Aligned_cols=57 Identities=30% Similarity=0.750 Sum_probs=49.9
Q ss_pred CCccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHH
Q psy4417 94 IKPVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELE 160 (440)
Q Consensus 94 ~~~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~ 160 (440)
.....+++|+|||.+..++ +|+|++||++.|++..+++||.++. ++..|+||++++.
T Consensus 14 ~~~~~~~~Alydy~a~~~~-------eLsf~~Gd~i~Vl~~~~~gWw~g~~---~g~~G~fP~~yV~ 70 (72)
T 2l0a_A 14 QHEARKVRAIYDFEAAEDN-------ELTFKAGEIITVLDDSDPNWWKGET---HQGIGLFPSNFVT 70 (72)
T ss_dssp CCCCEEEEESSCBCCSSTT-------BCCBCTTCEEEEEEEEETTEEEEEC---SSCEEECTTCCEE
T ss_pred CCCCeEEEECCccCCCCCC-------ccCCCCCCEEEEEEecCCCEEEEEE---CCCEEEechhhCc
Confidence 3455789999999998877 9999999999999988899999987 3569999999874
No 156
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.01 E-value=1.8e-09 Score=90.40 Aligned_cols=82 Identities=20% Similarity=0.408 Sum_probs=69.8
Q ss_pred CCCeEEEEeeCCCCccEEEEecCCCcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcCCceeee
Q psy4417 5 PHPLKKILGTGLSPCGLTVEQDANGNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSDGNIQFT 82 (440)
Q Consensus 5 ~~~r~v~l~r~g~~lGiti~~~~~~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~~~v~l~ 82 (440)
.+++.|.+.+...+||+++.++.+.+++|..|.++|||+++| |+.||+|++|||.++ .+..++...++..++.+.|.
T Consensus 18 ~~~~~v~l~~~~~~lG~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~~~~~g~~v~l~ 96 (117)
T 1uit_A 18 EEPRHVKVQKGSEPLGISIVSGEKGGIYVSKVTVGSIAHQAG-LEYGDQLLEFNGINLRSATEQQARLIIGQQCDTITIL 96 (117)
T ss_dssp CCCEEEEEECSSCCCCEEEEECTTSCEEEEEECTTSHHHHHT-CCTTCEECEETTEETTTCCHHHHHHHTTSCCSEEEEE
T ss_pred CCCEEEEEEeCCCCccEEEEccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEE
Confidence 456789999988999999998766789999999999999999 999999999999999 45566665566678888998
Q ss_pred eccCC
Q psy4417 83 IAPQG 87 (440)
Q Consensus 83 v~p~~ 87 (440)
|....
T Consensus 97 v~r~~ 101 (117)
T 1uit_A 97 AQYNP 101 (117)
T ss_dssp ECCCS
T ss_pred EEECC
Confidence 87654
No 157
>1zx6_A YPR154WP; SH3 domain, protein binding; 1.60A {Saccharomyces cerevisiae} PDB: 1ynz_A
Probab=99.00 E-value=1.4e-10 Score=84.81 Aligned_cols=53 Identities=28% Similarity=0.767 Sum_probs=48.0
Q ss_pred ccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHH
Q psy4417 98 CYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELE 160 (440)
Q Consensus 98 ~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~ 160 (440)
.+++|++||.+..++ +|+|++||++.|++..+++||.++. ++..|+||+++++
T Consensus 3 ~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv~ 55 (58)
T 1zx6_A 3 EYVEALYQFDPQQDG-------DLGLKPGDKVQLLEKLSPEWYKGSC---NGRTGIFPANYVK 55 (58)
T ss_dssp CEEEECSCBCCCSTT-------BCCBCTTCEEEEEEECSSSEEEEEE---TTEEEEEEGGGEE
T ss_pred eEEEECceECCCCCC-------CccCCCCCEEEEEEecCCCEEEEEE---CCcEEEeeHHHEE
Confidence 467899999998877 9999999999999998999999997 5789999999975
No 158
>2ke9_A Caskin-2; SH3 domain, ANK repeat, cytoplasm, phosphoprotein, protein binding; NMR {Homo sapiens}
Probab=99.00 E-value=2.3e-10 Score=90.23 Aligned_cols=60 Identities=22% Similarity=0.465 Sum_probs=50.1
Q ss_pred CccccccccccC-CCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCC---CCCCccccchhHHH
Q psy4417 95 KPVCYMRCLFTY-DPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEP---TGPMGLVPSQELEE 161 (440)
Q Consensus 95 ~~~~~vRal~dy-~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~---~~~~G~iPs~~~~~ 161 (440)
....+++|+||| .+..++ +|+|++||++.|+++.+.+||+++..+. ++..|+||++|++.
T Consensus 16 ~~~~~~~Alydy~~a~~~~-------eLsf~~GDiI~V~~~~~~gWw~G~~~~~~~~tg~~G~fPsnyV~~ 79 (83)
T 2ke9_A 16 RGSLKVRALKDFWNLHDPT-------ALNVRAGDVITVLEQHPDGRWKGHIHESQRGTDRIGYFPPGIVEV 79 (83)
T ss_dssp -CCEEEEESSCBCCCSCTT-------BCCBCTTCEEEESCSSCSSCEEEEECCSSTTSCCCEEECGGGEES
T ss_pred CCCeEEEEccccCCCCCCC-------cccccCCCEEEEEEecCCCeEEEEECCCCCCCCCEEEechHHEEE
Confidence 355789999999 677666 9999999999999999999999997532 36899999999853
No 159
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=99.00 E-value=1.2e-09 Score=86.89 Aligned_cols=78 Identities=23% Similarity=0.437 Sum_probs=65.6
Q ss_pred CeEEEEeeCCCCccEEEEecCC--CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcCCceeee
Q psy4417 7 PLKKILGTGLSPCGLTVEQDAN--GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSDGNIQFT 82 (440)
Q Consensus 7 ~r~v~l~r~g~~lGiti~~~~~--~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~~~v~l~ 82 (440)
+.++.+. .+.+|||++.++.+ .+++|..|.++|||+++| |+.||.|++|||.++ .++.++..+++..++.+.|.
T Consensus 4 ~~~v~~~-~~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~ 81 (89)
T 2q3g_A 4 SFKVVLE-GPAPWGFRLQGGKDFNVPLSISRLTPGGKAAQAG-VAVGDWVLSIDGENAGSLTHIEAQNKIRACGERLSLG 81 (89)
T ss_dssp EEEEEEE-SSSCCCEEEEEEGGGTEEEEEEEECTTSHHHHTT-CCTTCEEEEETTEEGGGCCHHHHHHHHHTCTTEEEEE
T ss_pred EEEEEEc-CCCcccEEEECcCCCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCEEEEE
Confidence 3455654 56899999998654 459999999999999999 999999999999999 47899999998888888888
Q ss_pred eccC
Q psy4417 83 IAPQ 86 (440)
Q Consensus 83 v~p~ 86 (440)
+...
T Consensus 82 v~R~ 85 (89)
T 2q3g_A 82 LSRA 85 (89)
T ss_dssp EEEE
T ss_pred EEeC
Confidence 8643
No 160
>2rqv_A BUD emergence protein 1; BEM1P, SH3, CDC42P, cytoplasm, cytoskeleton, SH3 domain, SIG protein; NMR {Saccharomyces cerevisiae} PDB: 2rqw_A
Probab=99.00 E-value=6.9e-11 Score=97.79 Aligned_cols=60 Identities=23% Similarity=0.346 Sum_probs=52.3
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHHh
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEER 162 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~r 162 (440)
...+++|+|||.+..++ +|+|++||++.|++..+++||+++..+..+..|+||++|++..
T Consensus 4 ~~~~~~Alydy~a~~~~-------ELsf~~Gd~i~vl~~~~~~Ww~g~~~g~~g~~G~fPsnYV~~~ 63 (108)
T 2rqv_A 4 GSLYAIVLYDFKAEKAD-------ELTTYVGENLFICAHHNCEWFIAKPIGRLGGPGLVPVGFVSII 63 (108)
T ss_dssp SCCCEEESSCCCCCSSS-------BCCCCSSEEECCCCEETTTEEEECCSSSSCCCEEEESTTCBCC
T ss_pred CCeEEEECCCcCCCCCC-------cCCcCCCCEEEEeEecCCCEEEEEECCccCCeeEeecceEEEe
Confidence 34679999999999887 9999999999999988999999998655566799999999653
No 161
>2g6f_X RHO guanine nucleotide exchange factor 7; SH3 domain, peptide interaction, signaling protein; HET: NCO; 0.92A {Rattus norvegicus} PDB: 2df6_A* 2p4r_A 2esw_A
Probab=99.00 E-value=1.6e-10 Score=84.79 Aligned_cols=53 Identities=23% Similarity=0.667 Sum_probs=48.0
Q ss_pred ccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHH
Q psy4417 98 CYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELE 160 (440)
Q Consensus 98 ~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~ 160 (440)
..++|++||.+..++ +|+|++||++.|++..+.+||.++. ++..|+||+++++
T Consensus 5 ~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv~ 57 (59)
T 2g6f_X 5 SVVRAKFNFQQTNED-------ELSFSKGDVIHVTRVEEGGWWEGTH---NGRTGWFPSNYVR 57 (59)
T ss_dssp CEEEESSCBCCSSTT-------BCCBCTTCEEEEEEECTTSEEEEEE---TTEEEEEEGGGEE
T ss_pred cEEEECceeCCCCcC-------CcCCCCCCEEEEEEecCCCEEEEEE---CCcEEEEeHHHEE
Confidence 478999999998776 9999999999999998999999997 5789999999874
No 162
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.00 E-value=1.2e-09 Score=87.94 Aligned_cols=81 Identities=25% Similarity=0.374 Sum_probs=68.2
Q ss_pred CCCCeEEEEeeCCCCccEEEEecCC--CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcCCce
Q psy4417 4 PPHPLKKILGTGLSPCGLTVEQDAN--GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSDGNI 79 (440)
Q Consensus 4 ~~~~r~v~l~r~g~~lGiti~~~~~--~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~~~v 79 (440)
+..++.|.+ +.+.+|||++.++.+ .+++|..|.++|||+++| |+.||+|++|||.++ .++.++..+++..++.+
T Consensus 6 ~~~~~~v~l-~~~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v 83 (94)
T 2eeg_A 6 SGMPHSVTL-RGPSPWGFRLVGGRDFSAPLTISRVHAGSKAALAA-LCPGDLIQAINGESTELMTHLEAQNRIKGCHDHL 83 (94)
T ss_dssp CCCCEEEEE-CCSSCCSCCEECCTTTTSCCEECCCCSSSHHHHTT-CCTTCEEEEETTEETTTCCHHHHHHHHHTCCSCE
T ss_pred cCceEEEEE-eCCCccCEEEECccCCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 455677888 555799999998764 459999999999999999 999999999999999 45788888888878888
Q ss_pred eeeeccC
Q psy4417 80 QFTIAPQ 86 (440)
Q Consensus 80 ~l~v~p~ 86 (440)
.|.|...
T Consensus 84 ~l~v~R~ 90 (94)
T 2eeg_A 84 TLSVSSG 90 (94)
T ss_dssp EEEEECC
T ss_pred EEEEEeC
Confidence 8888653
No 163
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=99.00 E-value=2.2e-09 Score=86.37 Aligned_cols=75 Identities=13% Similarity=0.211 Sum_probs=63.5
Q ss_pred EEEEeeCCCCccEEEEecCC----------CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcC
Q psy4417 9 KKILGTGLSPCGLTVEQDAN----------GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSD 76 (440)
Q Consensus 9 ~v~l~r~g~~lGiti~~~~~----------~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~ 76 (440)
.+.+.++. +|||+|.++.+ .+++|..|.++|||++ | |+.||.|++|||.++ .++.++..+++..+
T Consensus 6 ~v~l~~~~-~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-g-L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~ 82 (95)
T 1mfg_A 6 RVRVEKDP-ELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVSLLKTFQ 82 (95)
T ss_dssp EEEEECSS-SCSEEEEECBTSCCCSSSTTCCCEEEEEECTTSTTTT-T-CCTTCEEEEETTEECTTCBHHHHHHHHHHCC
T ss_pred EEEECCCC-CCCEEEeCCcCccCCccccCCCCEEEEEECCCCchhh-C-CCCCCEEEEECCEEcCCCCHHHHHHHhhcCC
Confidence 45555554 89999998642 4699999999999999 8 999999999999999 55888998888888
Q ss_pred CceeeeeccC
Q psy4417 77 GNIQFTIAPQ 86 (440)
Q Consensus 77 ~~v~l~v~p~ 86 (440)
..+.|.|...
T Consensus 83 ~~v~l~v~R~ 92 (95)
T 1mfg_A 83 NTVELIIVRE 92 (95)
T ss_dssp SEEEEEEEEE
T ss_pred CeEEEEEEeC
Confidence 8899988754
No 164
>2vwf_A Growth factor receptor-bound protein 2; polymorphism, phosphoprotein, golgi apparatus, alternative splicing, HOST-virus interaction, SH3C, signaling; 1.58A {Homo sapiens} PDB: 2w0z_A 1gcq_A 1gfc_A 1gfd_A 1io6_A 2vvk_A
Probab=99.00 E-value=2e-10 Score=83.93 Aligned_cols=53 Identities=36% Similarity=0.963 Sum_probs=48.2
Q ss_pred ccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHH
Q psy4417 98 CYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELE 160 (440)
Q Consensus 98 ~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~ 160 (440)
.+++|+++|.+..++ +|+|++||++.|++..+++||.++. ++..|+||++++.
T Consensus 3 ~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv~ 55 (58)
T 2vwf_A 3 TYVQALFDFDPQEDG-------ELGFRRGDFIHVMDNSDPNWWKGAC---HGQTGMFPRNYVT 55 (58)
T ss_dssp CEEEESSCBCCCSTT-------BCCBCTTCEEEEEECCSSSEEEEEE---TTEEEEEEGGGEE
T ss_pred eEEEECceECCCCcC-------CcCCCCCCEEEEEEcCCCCEEEEEE---CCcEEEEchHHeE
Confidence 568999999998877 9999999999999998999999998 5789999999874
No 165
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=99.00 E-value=2.7e-09 Score=88.43 Aligned_cols=82 Identities=22% Similarity=0.361 Sum_probs=69.8
Q ss_pred CCeEEEEeeCCCCccEEEEecCC-----CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhc--C
Q psy4417 6 HPLKKILGTGLSPCGLTVEQDAN-----GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKS--D 76 (440)
Q Consensus 6 ~~r~v~l~r~g~~lGiti~~~~~-----~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~--~ 76 (440)
+...+.+.+...+|||++.++.+ .+++|..|.++|||+++|.|+.||.|++|||.++ .+++++..+|+.. +
T Consensus 11 ~~~~~~l~~~~~glG~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g 90 (111)
T 2koj_A 11 KRLNIQLKKGTEGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAGKSQEEVVSLLRSTKME 90 (111)
T ss_dssp EEEEEEEECBTTBTCEEEEECSCSSSSSSCEEEEEECSSSHHHHHCSSCTTCEEEEETTEECTTSCHHHHHHHHHHCCCS
T ss_pred cEEEEEEEECCCccCEEEEeccCCCCCCcCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCC
Confidence 34566777888899999998653 4699999999999999999999999999999999 6789999999875 6
Q ss_pred CceeeeeccCC
Q psy4417 77 GNIQFTIAPQG 87 (440)
Q Consensus 77 ~~v~l~v~p~~ 87 (440)
..+.|.|....
T Consensus 91 ~~v~l~v~R~~ 101 (111)
T 2koj_A 91 GTVSLLVFRQE 101 (111)
T ss_dssp SEEEEEEEECC
T ss_pred CeEEEEEEeCC
Confidence 78888886543
No 166
>2fpe_A C-JUN-amino-terminal kinase interacting protein 1; SRC-homology 3 (SH3) domain, all beta structure, signaling protein; HET: P6G; 1.75A {Rattus norvegicus} PDB: 2fpd_A*
Probab=99.00 E-value=2.5e-10 Score=84.63 Aligned_cols=56 Identities=25% Similarity=0.447 Sum_probs=49.2
Q ss_pred ccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 98 CYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 98 ~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
..++|+|+|.+..++ +|+|++||++.|++..+++||.++... ++..|+||++++++
T Consensus 4 ~~~~al~~y~~~~~~-------eLs~~~Gd~i~v~~~~~~~W~~g~~~~-~g~~G~fP~~yv~~ 59 (62)
T 2fpe_A 4 QTHRAIFRFVPRHED-------ELELEVDDPLLVELQAEDYWYEAYNMR-TGARGVFPAYYAIE 59 (62)
T ss_dssp CCEEECSCBCCSSTT-------BCCBCTTCEEEEEEECTTSEEEEEETT-TCCEEEEEGGGEEE
T ss_pred CEEEECccCCccCcC-------cCcCCCCCEEEEEEecCCCEEEEEECC-CCCEEEechHHEEE
Confidence 467999999998877 999999999999999999999998643 47899999999854
No 167
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=98.99 E-value=2.9e-09 Score=90.25 Aligned_cols=83 Identities=23% Similarity=0.318 Sum_probs=70.3
Q ss_pred CCCeEEEEeeC-CCCccEEEEecCC-----------CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHH
Q psy4417 5 PHPLKKILGTG-LSPCGLTVEQDAN-----------GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQI 70 (440)
Q Consensus 5 ~~~r~v~l~r~-g~~lGiti~~~~~-----------~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~ 70 (440)
..|+.+.+.+. ...|||++.+... .+++|..|.++|||+++|.|+.||+|++|||.++ .+++++..
T Consensus 23 ~~p~~v~l~k~~~~~lGi~v~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~ 102 (123)
T 2iwq_A 23 MQPRRVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVE 102 (123)
T ss_dssp CCCEEEEECCCTTSCCSEEEEECC---------CCCCSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHH
T ss_pred CCCEEEEEEecCCCCccEEEEeccCccccccccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 45678888876 4689999986432 4599999999999999999999999999999999 45999999
Q ss_pred HHHhcCCceeeeeccCC
Q psy4417 71 EVVKSDGNIQFTIAPQG 87 (440)
Q Consensus 71 ~L~~~~~~v~l~v~p~~ 87 (440)
+|+..++.+.|+|....
T Consensus 103 ~l~~~~~~v~l~v~r~~ 119 (123)
T 2iwq_A 103 AIRKAGNPVVFMVQSII 119 (123)
T ss_dssp HHHHCCSSEEEEEECCC
T ss_pred HHHcCCCeEEEEEEECC
Confidence 99988889999887644
No 168
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=98.99 E-value=1.4e-09 Score=88.19 Aligned_cols=78 Identities=21% Similarity=0.286 Sum_probs=67.1
Q ss_pred EEEEeeCCCCccEEEEecCC---------CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccCC--CHHHHHHHHHhcCC
Q psy4417 9 KKILGTGLSPCGLTVEQDAN---------GNLIIARILAGSLIDKQGVLKVGDVILGVNGENVS--SPEDLQIEVVKSDG 77 (440)
Q Consensus 9 ~v~l~r~g~~lGiti~~~~~---------~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v~--t~~e~~~~L~~~~~ 77 (440)
.+++.+.+.++||++.+... .+++|..|.++|||+++| |+.||.|++|||.++. +++++..+|+..++
T Consensus 5 ~v~l~~~~~~~Gf~l~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~ 83 (99)
T 3khf_A 5 PIVIHSSGKKYGFSLRAIRVYMGDSDVYTVHHVVWSVEDGSPAQEAG-LRAGDLITHINGESVLGLVHMDVVELLLKSGN 83 (99)
T ss_dssp CEEEEC-CCCCCEEEEEEEEESSSSSCEEEEEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHHSCS
T ss_pred CEEEEeCCCCCcEEEEecccccCccccccCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCCC
Confidence 47788899999999986431 146899999999999999 9999999999999994 89999999998899
Q ss_pred ceeeeeccCC
Q psy4417 78 NIQFTIAPQG 87 (440)
Q Consensus 78 ~v~l~v~p~~ 87 (440)
.+.|++.+..
T Consensus 84 ~v~l~v~r~~ 93 (99)
T 3khf_A 84 KISLRTTALE 93 (99)
T ss_dssp EEEEEEECSC
T ss_pred EEEEEEEECC
Confidence 9999998753
No 169
>2i0n_A Class VII unconventional myosin; beta-sheet loop, structural protein; NMR {Dictyostelium discoideum}
Probab=98.99 E-value=2e-10 Score=89.89 Aligned_cols=58 Identities=31% Similarity=0.507 Sum_probs=51.0
Q ss_pred CCccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCC-ceEEEecCCCCCCccccchhHHH
Q psy4417 94 IKPVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPN-WWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 94 ~~~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~-ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
.....+++|+|||.+..++ +|+|++||++.|++..+.+ ||.++. ++..|+||++|++.
T Consensus 7 ~~~~~~~~alydy~~~~~~-------eLsf~~Gd~i~v~~~~~~~gWw~g~~---~g~~G~fP~~yv~~ 65 (80)
T 2i0n_A 7 PEFAKYARALKDYNVSDTS-------LLPFKRNDIITITFKDQENKWFMGQL---NGKEGSFPVDHVEI 65 (80)
T ss_dssp CCCCCEEEESSCBCCCSSS-------SCCBCSSEEEEEEEESSSSSEEEEEE---TTEEEEEEGGGEEE
T ss_pred CCCCeEEEECCCCCcCCCC-------CcCCCCCCEEEEEEecCCCCEEEEEE---CCcEEEechHHEEE
Confidence 3456789999999998877 9999999999999988777 999986 47899999999865
No 170
>3h0h_A Proto-oncogene tyrosine-protein kinase FYN; beta barrel, transferase; HET: PG4; 1.76A {Homo sapiens} SCOP: b.34.2.1 PDB: 3h0i_A 3h0f_A*
Probab=98.99 E-value=2.9e-10 Score=87.17 Aligned_cols=58 Identities=31% Similarity=0.718 Sum_probs=50.7
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
...+++|+|||.+..+. +|+|++||++.|++..+.+||.++... ++..|+||++|+++
T Consensus 14 ~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~~~-~g~~G~~P~~yv~~ 71 (73)
T 3h0h_A 14 GVTLFVALYDYEAITED-------DLSFHKGEKFQILNSSEGDWWEARSLT-TGETGYIPSNYVAP 71 (73)
T ss_dssp TTCEEEESSCBCCSSTT-------BCCBCTTCEEEEEECSSSSEEEEEETT-TCCEEEEEGGGEEE
T ss_pred CCEEEEECccCCCCCCC-------cceEeCCCEEEEEEecCCCeEEEEECC-CCCEEEEEHHHeEE
Confidence 45678999999998877 999999999999999999999999853 36799999999753
No 171
>2bzy_A CRK-like protein, CRKL SH3C; SH3 domain, dimer, nuclear export; 2.5A {Homo sapiens} PDB: 2bzx_A
Probab=98.99 E-value=1.5e-10 Score=87.34 Aligned_cols=54 Identities=20% Similarity=0.463 Sum_probs=47.9
Q ss_pred ccccccccCCCC--CCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 98 CYMRCLFTYDPK--EDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 98 ~~vRal~dy~p~--~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
.+++|+|+|.+. .++ +|+|++||++.|++..+.+||.++. ++..|+||++++..
T Consensus 2 ~~~~al~dy~~~~~~~~-------eLsf~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~fP~~yv~~ 57 (67)
T 2bzy_A 2 VFAKAIQKRVPCAYDKT-------ALALEVGDIVKVTRMNINGQWEGEV---NGRKGLFPFTHVKI 57 (67)
T ss_dssp EEEEECSCBCSEEECTT-------BCCBCTTCEEEEEEECSSSEEEEEE---TTEEEEEEGGGEEE
T ss_pred cEEEEeeeECCCCCCCC-------ccccCCCCEEEEEEecCCCeEEEEe---CCcEEEEehHHeEE
Confidence 468999999997 665 9999999999999999999999977 47899999999854
No 172
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.99 E-value=2.2e-10 Score=97.46 Aligned_cols=85 Identities=21% Similarity=0.335 Sum_probs=73.8
Q ss_pred CCCCCeEEEEeeCCCCccEEEEec------------------------------CCCcEEEEEEcCCChhhhcCCCCCCC
Q psy4417 3 HPPHPLKKILGTGLSPCGLTVEQD------------------------------ANGNLIIARILAGSLIDKQGVLKVGD 52 (440)
Q Consensus 3 ~~~~~r~v~l~r~g~~lGiti~~~------------------------------~~~~i~V~~V~~gs~A~~~G~L~~GD 52 (440)
.++.+|.|+|.|+..+|||++.+. .+.+++|..|.++|||+++| |+.||
T Consensus 5 ~~~~~r~v~l~r~~~g~Gf~l~~~t~y~~~~~~~~~~~~~~~G~~~G~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD 83 (126)
T 2yuy_A 5 SSGGPKTVTLKRTSQGFGFTLRHFIVYPPESAIQFSYKDEENGNRGGKQRNRLEPMDTIFVKQVKEGGPAFEAG-LCTGD 83 (126)
T ss_dssp CSSSCCCEEEECCSSSCSCCBCCCCCCCCSSCCCSCSSSCCCCSCCCTTSCCCCCCCCCCBCCCCSSSHHHHHT-CCSSC
T ss_pred CCCCCEEEEEEECCCCcceeecCccccCCHHHHHHHHHhhcCcceeceeeecccCCCCEEEEEECCCChHHHcC-CCCCC
Confidence 467888999999999999999751 11348999999999999999 99999
Q ss_pred EEEeECCccC--CCHHHHHHHHHhcCCceeeeeccCCC
Q psy4417 53 VILGVNGENV--SSPEDLQIEVVKSDGNIQFTIAPQGD 88 (440)
Q Consensus 53 ~Il~VNg~~v--~t~~e~~~~L~~~~~~v~l~v~p~~~ 88 (440)
+|++|||.++ .+++++..+|+..+..+.|.|.+...
T Consensus 84 ~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~~ 121 (126)
T 2yuy_A 84 RIIKVNGESVIGKTYSQVIALIQNSDTTLELSVMPKDS 121 (126)
T ss_dssp CCCEETTEECSSCCHHHHHHHHHTCTTEEEEECCCCCC
T ss_pred EEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEECCC
Confidence 9999999999 49999999999888899999977543
No 173
>2xmf_A Myosin 1E SH3; motor protein, SH3 domain; HET: DIA; 1.50A {Mus musculus}
Probab=98.99 E-value=2.4e-10 Score=84.21 Aligned_cols=54 Identities=30% Similarity=0.733 Sum_probs=48.6
Q ss_pred cccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHH
Q psy4417 97 VCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELE 160 (440)
Q Consensus 97 ~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~ 160 (440)
...++|++||.+..++ +|+|++||++.|++..+.+||.++. ++..|+||+++++
T Consensus 5 ~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv~ 58 (60)
T 2xmf_A 5 SPQCKALYAYDAQDTD-------ELSFNANDIIDIIKEDPSGWWTGRL---RGKQGLFPNNYVT 58 (60)
T ss_dssp SCEEEESSCBCCSSTT-------BCCBCTTCEEEEEEECTTSEEEEEE---TTEEEEEEGGGEE
T ss_pred CcEEEECccCCcCCcC-------CcCCCCCCEEEEEEecCCCEEEEEE---CCEEEEEcHHHEE
Confidence 4578999999998877 9999999999999998999999998 4789999999874
No 174
>2jte_A CD2-associated protein; SH3 domain, coiled coil, cytoplasm, phosphorylation, SH3-binding, signaling protein; NMR {Mus musculus} PDB: 2kro_A
Probab=98.99 E-value=2.5e-10 Score=85.17 Aligned_cols=55 Identities=27% Similarity=0.730 Sum_probs=48.3
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeecC--CCCceEEEecCCCCCCccccchhHH
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQK--DPNWWQAQLIEPTGPMGLVPSQELE 160 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~--d~~ww~a~~~~~~~~~G~iPs~~~~ 160 (440)
...+++|+|||.+..++ +|+|++||++.|++.. +.+||.++. ++..|+||+++++
T Consensus 5 ~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~~~W~~g~~---~g~~G~~P~~yv~ 61 (64)
T 2jte_A 5 AKEYCRTLFPYTGTNED-------ELTFREGEIIHLISKETGEAGWWKGEL---NGKEGVFPDNFAV 61 (64)
T ss_dssp SSEEEEESSCBCCSSSS-------BCCBCTTCEEEEEESCSSSTTEEEEEE---TTEEEEEEGGGEE
T ss_pred CCEEEEECccCCccCCC-------ccCCCCCCEEEEEECCCCCCCEEEEEE---CCeEEEEeHHHEE
Confidence 45678999999998877 9999999999999874 789999997 5789999999874
No 175
>3a00_A Guanylate kinase, GMP kinase; domain movement, dimerization, acetylation, ATP-binding, nucleotide-binding, phosphoprotein, transferase; 1.80A {Saccharomyces cerevisiae} PDB: 1ex6_A* 1ex7_A 1gky_A* 2zzz_A 3sqk_A 4f4j_A 2zzy_A
Probab=98.99 E-value=6.5e-10 Score=100.58 Aligned_cols=96 Identities=33% Similarity=0.491 Sum_probs=80.6
Q ss_pred eEEeecCcchhhhhhhhhccccccccCCCceEEecCCCccceeecCCCcccchhhccCccccccCHHHHHHHHHcCceee
Q psy4417 263 ICVLDCSPVGLFTFLLGLIEGTVTAKLIPYTYSIPICSWSSFFASDTTRPMRELEENGQNYWFTSREVMERDIQDHKFLE 342 (440)
Q Consensus 263 ~~il~~~~~g~~~l~~~l~~~~~~~~~~p~~i~i~~~~~~~f~~~~ttr~~~~~e~~g~~y~f~s~~~f~~~~~~~~fle 342 (440)
++|++.+..|..+|++.|.... .+..- ++.++|||+++.++++|.+|+|++.+.|..++..+.|+|
T Consensus 4 i~l~GpsGaGKsTl~~~L~~~~-----~~~~~---------~~~~~~tr~~~~ge~~g~~~~~~~~~~~~~~~~~~~~~e 69 (186)
T 3a00_A 4 IVISGPSGTGKSTLLKKLFAEY-----PDSFG---------FSVSSTTRTPRAGEVNGKDYNFVSVDEFKSMIKNNEFIE 69 (186)
T ss_dssp EEEESSSSSSHHHHHHHHHHHC-----GGGEE---------CCCEEECSCCCTTCCBTTTBEECCHHHHHHHHHTTCEEE
T ss_pred EEEECCCCCCHHHHHHHHHhhC-----Cccce---------EEeeccccCCCCCccCCeeeeecCHHHHHHHHhhcceee
Confidence 4666667777777776665321 12333 677899999999999999999999999999999999999
Q ss_pred EEEEcCccccccHHHHHHHHhcCCeeEecC
Q psy4417 343 YGEHNGHLYGTHLDSIREVILSGKICVLDC 372 (440)
Q Consensus 343 ~~~~~~~~yGt~~~~i~~~~~~~~~~i~~~ 372 (440)
|.++.+++||++.+.++++++.|+.+++++
T Consensus 70 ~~~~~~~~yg~~~~~i~~~l~~g~~~il~~ 99 (186)
T 3a00_A 70 WAQFSGNYYGSTVASVKQVSKSGKTCILDI 99 (186)
T ss_dssp EEEETTEEEEEEHHHHHHHHHTTCEEEEEC
T ss_pred EEEEeceeccCcHHHHHHHHHcCCeEEEEE
Confidence 999999999999999999999999887754
No 176
>2yt6_A Adult MALE urinary bladder cDNA, riken FULL- length enriched library, clone:9530076O17...; SH3_1 domain; NMR {Mus musculus}
Probab=98.99 E-value=3.9e-10 Score=93.42 Aligned_cols=76 Identities=26% Similarity=0.598 Sum_probs=61.7
Q ss_pred CceeeeeccCCCCCCCCCCccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccc
Q psy4417 77 GNIQFTIAPQGDDASLPIKPVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPS 156 (440)
Q Consensus 77 ~~v~l~v~p~~~~~~~~~~~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs 156 (440)
..+++.+.|.....+.+ ....+++|+|||.+..++ +|+|++||++.|++..+.+||.++... ++..|+||+
T Consensus 8 ~~~~~~~~P~~~~~~~~-~~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~~~-~g~~G~~P~ 78 (109)
T 2yt6_A 8 ASSSFSVVSSSYPTGLT-GGVTIFVALYDYEARTTE-------DLSFKKGERFQIINNTEGDWWEARSIA-TGKSGYIPS 78 (109)
T ss_dssp CCCCCCCCCCCCCSSCC-SSCCEEEESSCCCCSSTT-------SCCCCTTCEEEEEECSCTTCEEEEESS-SCCEEEECT
T ss_pred CCceeeeCCCCCCCCCC-CCCEEEEECccCCCCCCC-------ccCCCCCCEEEEEEccCCCcEEEEECC-CCCEEEech
Confidence 34567777776554433 356789999999998877 999999999999999899999999743 468999999
Q ss_pred hhHHH
Q psy4417 157 QELEE 161 (440)
Q Consensus 157 ~~~~~ 161 (440)
++++.
T Consensus 79 ~yv~~ 83 (109)
T 2yt6_A 79 NYVVP 83 (109)
T ss_dssp TTEEE
T ss_pred HHcEE
Confidence 99875
No 177
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.99 E-value=2.4e-09 Score=85.60 Aligned_cols=76 Identities=21% Similarity=0.445 Sum_probs=64.5
Q ss_pred CCCeEEEEeeC--CCCccEEEEecCCCcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcCCcee
Q psy4417 5 PHPLKKILGTG--LSPCGLTVEQDANGNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSDGNIQ 80 (440)
Q Consensus 5 ~~~r~v~l~r~--g~~lGiti~~~~~~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~~~v~ 80 (440)
.+.+.+.+.+. ...+||++.++ +|..|.++|||+++| |+.||.|++|||.++ .+++++..+|+..++.+.
T Consensus 10 ~~~~~~~i~~~~~~~~lG~~~~~G-----~V~~V~~~spA~~aG-L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~g~~v~ 83 (90)
T 1y7n_A 10 GNVTTVLIRRPDLRYQLGFSVQNG-----IICSLMRGGIAERGG-VRVGHRIIEINGQSVVATPHEKIVHILSNAVGEIH 83 (90)
T ss_dssp SSCEEEEEEESSTTSCCCEEEETT-----EEEEECTTSHHHHHT-CCSSCEEEEETTEECTTSCHHHHHHHHHHCCEEEE
T ss_pred CCcceEEEEeCCCccccCeEecCC-----EEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 34455666654 45899998652 899999999999999 999999999999999 689999999998888999
Q ss_pred eeeccC
Q psy4417 81 FTIAPQ 86 (440)
Q Consensus 81 l~v~p~ 86 (440)
|+|.|.
T Consensus 84 l~v~p~ 89 (90)
T 1y7n_A 84 MKTMPA 89 (90)
T ss_dssp EEEECC
T ss_pred EEEEEC
Confidence 999874
No 178
>2qor_A Guanylate kinase; phosphotransferase, purine metabolism, structural genomics, structural genomics of pathogenic protozoa consortium; HET: 5GP POP; 1.80A {Plasmodium vivax}
Probab=98.99 E-value=2.3e-09 Score=98.37 Aligned_cols=102 Identities=29% Similarity=0.432 Sum_probs=83.3
Q ss_pred HhcCCeE-EeecCcchhhhhhhhhccccccccCCCc-eEEecCCCccceeecCCCcccchhhccCccccccCHHHHHHHH
Q psy4417 258 ILSGKIC-VLDCSPVGLFTFLLGLIEGTVTAKLIPY-TYSIPICSWSSFFASDTTRPMRELEENGQNYWFTSREVMERDI 335 (440)
Q Consensus 258 ~~~g~~~-il~~~~~g~~~l~~~l~~~~~~~~~~p~-~i~i~~~~~~~f~~~~ttr~~~~~e~~g~~y~f~s~~~f~~~~ 335 (440)
++.|+++ |++.+.+|..+|++.|.+.. |. +. +..++|||+++.++.+|.+|+|++.++|.+++
T Consensus 9 ~~~~~~i~l~G~sGsGKsTl~~~L~~~~------~~~~~---------~~~~~ttR~~~~~e~~g~~~~~~~~~~~~~~~ 73 (204)
T 2qor_A 9 MARIPPLVVCGPSGVGKGTLIKKVLSEF------PSRFR---------FSISCTTRNKREKETNGVDYYFVDKDDFERKL 73 (204)
T ss_dssp CCCCCCEEEECCTTSCHHHHHHHHHHHC------TTTEE---------ECCEEECSCCCTTCCBTTTEEECCHHHHHHHH
T ss_pred cccCCEEEEECCCCCCHHHHHHHHHHhC------cccee---------eeeeecCCCCCCCCCCCcceeeCCHHHHHHHH
Confidence 4556644 44555556677777665332 22 33 66799999999999999999999999999999
Q ss_pred HcCceeeEEEEcCccccccHHHHHHHHhcCCeeEecCCC
Q psy4417 336 QDHKFLEYGEHNGHLYGTHLDSIREVILSGKICVLDCSP 374 (440)
Q Consensus 336 ~~~~fle~~~~~~~~yGt~~~~i~~~~~~~~~~i~~~~~ 374 (440)
.++.|+++.++.+++||++.+.++.+++.|+.++++..+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~g~~vi~d~~~ 112 (204)
T 2qor_A 74 KEGQFLEFDKYANNFYGTLKSEYDLAVGEGKICLFEMNI 112 (204)
T ss_dssp HTTCEEEEEEETTEEEEEEHHHHHHHHHTTCEEEEECCH
T ss_pred HcCCCEEeHHhCCCeecCCHHHHHHHHHcCCeEEEEECH
Confidence 999999999999999999999999999999999888643
No 179
>2yuq_A Tyrosine-protein kinase ITK/TSK; T-cell-specific kinase, tyrosine-protein kinase LYK, kinase EMT, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.99 E-value=2.8e-10 Score=90.07 Aligned_cols=58 Identities=26% Similarity=0.516 Sum_probs=51.2
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHHh
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEER 162 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~r 162 (440)
...+++|+|||.+..++ +|+|++||++.|++..+.+||.++.. ++..|+||++|+++.
T Consensus 18 ~~~~~~alydy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~~~~~--~g~~G~~P~~yv~~~ 75 (85)
T 2yuq_A 18 EETVVIALYDYQTNDPQ-------ELALRRNEEYCLLDSSEIHWWRVQDR--NGHEGYVPSSYLVEK 75 (85)
T ss_dssp SSCEEEESSCCCCSCSS-------BCCCCBTEEEEEEECCSSSEEEEECS--SSCEEEEETTTCEEC
T ss_pred CCeEEEECcCCCCCCCC-------cCCCCCCCEEEEEEecCCCeEEEEEC--CCCEEEEehHHeEEc
Confidence 44679999999998877 99999999999999999999999863 478999999999764
No 180
>2cud_A SRC-like-adapter; SH3 domain, negative mitogenesis regulator, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.99 E-value=3e-10 Score=88.63 Aligned_cols=57 Identities=21% Similarity=0.484 Sum_probs=49.4
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
...+++|+|||.+..++ +|+|++||+|.|++ .+.+||.++... ++..|+||++|+++
T Consensus 16 ~~~~~~Alydy~a~~~~-------eLs~~~Gd~i~v~~-~~~~Ww~~~~~~-~g~~G~~P~~yv~~ 72 (79)
T 2cud_A 16 DSDFLAVLSDYPSPDIS-------PPIFRRGEKLRVIS-DEGGWWKAISLS-TGRESYIPGICVAR 72 (79)
T ss_dssp CCCEEEESSCSSCTTTS-------CCSSCTTCEEEEEE-EETTEEEEEETT-TCCEEEEEGGGEEE
T ss_pred CCeEEEEccCCCCCCCC-------cCCCCCCCEEEEEe-cCCCeEEEEECC-CCCEEEeeHHHeEE
Confidence 45679999999998877 99999999999998 578999999853 36899999999864
No 181
>2dl4_A Protein STAC; SH3 domain, STAC protein, SRC homology 3, cysteine-rich domain protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.99 E-value=2.8e-10 Score=86.12 Aligned_cols=56 Identities=21% Similarity=0.645 Sum_probs=49.6
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
...+++|+|||.+..+. +|+|++||++.|++..+.+||.++. ++..|+||++++..
T Consensus 6 ~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv~~ 61 (68)
T 2dl4_A 6 SGNTYVALYKFVPQENE-------DLEMRPGDIITLLEDSNEDWWKGKI---QDRIGFFPANFVQR 61 (68)
T ss_dssp CCCEEEESSCCCCSSTT-------BCCCCTTCEEEEEECCCSSEEEEEC---SSCEEEEETTTEEE
T ss_pred CCCEEEEeeeECCCCcC-------CcCCCCCCEEEEEEeCCCCEEEEEE---CCcEEEEehHHeEE
Confidence 34578999999998877 9999999999999999999999995 47899999999854
No 182
>2dmo_A Neutrophil cytosol factor 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.98 E-value=2.2e-10 Score=86.67 Aligned_cols=56 Identities=30% Similarity=0.514 Sum_probs=49.6
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
...+++|+|+|.+..++ +|+|++||+++|++..+.+||.++. ++..|+||++|++.
T Consensus 6 ~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv~~ 61 (68)
T 2dmo_A 6 SGEAHRVLFGFVPETKE-------ELQVMPGNIVFVLKKGNDNWATVMF---NGQKGLVPCNYLEP 61 (68)
T ss_dssp CSEEEEECSSCCCCSSS-------SCCCCTTCEEEECEECSSSCEEEEE---TTEEEEECSTTEEE
T ss_pred CCCEEEECcCCCcCCcC-------CCCCCCCCEEEEEEeCCCCEEEEEe---CCCEEEeehHHeEE
Confidence 34578999999998877 9999999999999999999999976 57899999999864
No 183
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=98.98 E-value=2.1e-09 Score=85.78 Aligned_cols=79 Identities=27% Similarity=0.379 Sum_probs=66.0
Q ss_pred CeEEEEeeCCCCccEEEEecCC--CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcCCceeee
Q psy4417 7 PLKKILGTGLSPCGLTVEQDAN--GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSDGNIQFT 82 (440)
Q Consensus 7 ~r~v~l~r~g~~lGiti~~~~~--~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~~~v~l~ 82 (440)
++.+.+. .+.+|||++.++.+ .+++|..|.++|||+++| |+.||.|++|||.++ .++.++..+++..++.+.|.
T Consensus 4 ~~~v~~~-~~~~~G~~l~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~ 81 (91)
T 2pkt_A 4 TQQIDLQ-GPGPWGFRLVGGKDFEQPLAISRVTPGSKAALAN-LCIGDVITAIDGENTSNMTHLEAQNRIKGCTDNLTLT 81 (91)
T ss_dssp EEEEEEE-SSSCCSEEEEEEGGGTEEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEE
T ss_pred cEEEEEC-CCCCCCEEEEccCCCCCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEE
Confidence 3455554 56799999998654 469999999999999999 999999999999999 45669999998888889998
Q ss_pred eccCC
Q psy4417 83 IAPQG 87 (440)
Q Consensus 83 v~p~~ 87 (440)
+....
T Consensus 82 v~R~g 86 (91)
T 2pkt_A 82 VARSE 86 (91)
T ss_dssp EEEEC
T ss_pred EEECC
Confidence 87643
No 184
>1wie_A RIM binding protein 2; beta barrel, KIAA0318 protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=98.98 E-value=3.3e-10 Score=91.84 Aligned_cols=64 Identities=22% Similarity=0.417 Sum_probs=52.5
Q ss_pred CccccccccccCCCCCCCCCCCccccceeccCCEEEEe-ecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 95 KPVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQIL-NQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 95 ~~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~-~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
....+++|+|||.+.. +..+..+.+|+|++||||.|+ +..+.+||+++.. ++..|+||++|+++
T Consensus 15 ~~~~~~~Alydy~~~~-~~~~~~~~eLsf~~Gd~i~v~~~~~~~gWw~g~~~--~g~~G~~Psnyv~~ 79 (96)
T 1wie_A 15 GKVHLCVARYSYNPFD-GPNENPEAELPLTAGKYLYVYGDMDEDGFYEGELL--DGQRGLVPSNFVDF 79 (96)
T ss_dssp SCEEEEEESSCCCGGG-SSCSCTTTBCCCCTTCEEEEESSCCSSSCCEEEET--TCCBCBCCTTSEEC
T ss_pred CCCcEEEECCccCCCc-ccCCCCCCeeeECCCCEEEEeEecCCCCEEEEEEC--CCCEEEEchHHEEE
Confidence 3456889999999976 233444569999999999999 7789999999974 37899999999965
No 185
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=98.98 E-value=1.4e-09 Score=103.90 Aligned_cols=82 Identities=20% Similarity=0.355 Sum_probs=72.6
Q ss_pred CCCeEEEEeeC-CCCccEEEEecCC--CcEEEEEEcCCChhhh-cCCCCCCCEEEeECCccC--CCHHHHHHHHHhcCCc
Q psy4417 5 PHPLKKILGTG-LSPCGLTVEQDAN--GNLIIARILAGSLIDK-QGVLKVGDVILGVNGENV--SSPEDLQIEVVKSDGN 78 (440)
Q Consensus 5 ~~~r~v~l~r~-g~~lGiti~~~~~--~~i~V~~V~~gs~A~~-~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~~~ 78 (440)
.+++.|.+.|. +.+|||+|.++.+ .+++|..|.++|||++ +| |+.||+|++|||+++ .+++++..+|+..++.
T Consensus 76 ~~~r~V~L~k~~~~glGf~I~gg~d~~~gi~V~~V~~gspA~~~aG-L~~GD~Il~VNG~~v~~~t~~e~v~~l~~~g~~ 154 (263)
T 1z87_A 76 LQRRRVTVRKADAGGLGISIKGGRENKMPILISKIFKGLAADQTEA-LFVGDAILSVNGEDLSSATHDEAVQALKKTGKE 154 (263)
T ss_dssp CSSEEECCCTTTTCCCCCEEEEETTTTEEEEEEECCTTSHHHHCTT-CCSSCEEEEESSCBCTTSCHHHHHHHHHHCCSC
T ss_pred CccEEEEEEeCCCCCEeEEEeeccCCCCCEEEEEECCCCHHHHhCC-CCCCCEEEEECCEECCCcCHHHHHHHHhcCCCe
Confidence 36788999987 5899999998764 4599999999999999 56 999999999999999 6799999999999999
Q ss_pred eeeeeccCC
Q psy4417 79 IQFTIAPQG 87 (440)
Q Consensus 79 v~l~v~p~~ 87 (440)
+.|+|....
T Consensus 155 V~L~V~R~~ 163 (263)
T 1z87_A 155 VVLEVKYMK 163 (263)
T ss_dssp CCEEEECCS
T ss_pred EEEEEEeCc
Confidence 999998654
No 186
>1csk_A C-SRC SH3 domain; phosphotransferase; 2.50A {Homo sapiens} SCOP: b.34.2.1
Probab=98.98 E-value=2e-10 Score=87.58 Aligned_cols=58 Identities=28% Similarity=0.609 Sum_probs=49.7
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEee-cCCCCceEEEecCCCCCCccccchhHHHh
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILN-QKDPNWWQAQLIEPTGPMGLVPSQELEER 162 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~-~~d~~ww~a~~~~~~~~~G~iPs~~~~~r 162 (440)
....++|+|||.+..++ +|+|++||++.|++ ..+.+||.++.. ++..|+||++++++.
T Consensus 10 ~~~~~~alydy~~~~~~-------eLs~~~Gd~i~v~~~~~~~~Ww~g~~~--~g~~G~~P~~yv~~~ 68 (71)
T 1csk_A 10 SGTECIAKYNFHGTAEQ-------DLPFCKGDVLTIVAVTKDPNWYKAKNK--VGREGIIPANYVQKR 68 (71)
T ss_dssp -CEEEEESSCBCCSSTT-------BCCBCTTCEEEEEEECSSTTEEEEECT--TSCEEEEETTSEEC-
T ss_pred CCCEEEEceeECcCCCC-------cCCCCCCCEEEEeECCCCCCCEEEEeC--CCCEEEEehHHeEEc
Confidence 34578999999998877 99999999999999 789999999953 578999999998654
No 187
>1wyx_A CRK-associated substrate; beta sheets, cell adhesion; 1.14A {Homo sapiens}
Probab=98.98 E-value=2.5e-10 Score=86.57 Aligned_cols=55 Identities=29% Similarity=0.631 Sum_probs=48.9
Q ss_pred cccccccccCCCCCCCCCCCccccceeccCCEEEEeecC---CCCceEEEecCCCCCCccccchhHHH
Q psy4417 97 VCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQK---DPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 97 ~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~---d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
.++++|+|||.+..++ +|+|++||++.|++.. +.+||.++. ++..|+||+++++.
T Consensus 3 ~~~~~alydy~~~~~~-------eLs~~~Gd~i~v~~~~~~~~~~Ww~g~~---~g~~G~~P~~yv~~ 60 (69)
T 1wyx_A 3 NVLAKALYDNVAESPD-------ELSFRKGDIMTVLEQDTQGLDGWWLCSL---HGRQGIVPGNRLKI 60 (69)
T ss_dssp EEEEEESSCBCCSSTT-------BCCBCTTCEEEEEETTGGGCTTEEEEEE---TTEEEEEEGGGEEE
T ss_pred CEEEEECccCCcCCCC-------ccCCcCCCEEEEeECCCCCCCCcEEEEE---CCcEEEechhhEEE
Confidence 3578999999998877 9999999999999987 799999996 57799999999864
No 188
>2k2m_A EPS8-like protein 1; alternative splicing, coiled coil, cytoplasm, SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2rol_A
Probab=98.98 E-value=4e-10 Score=85.23 Aligned_cols=57 Identities=23% Similarity=0.609 Sum_probs=49.6
Q ss_pred CccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 95 KPVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 95 ~~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
....+++|+|||.+..+. +|+|++||++.|++.+ ++||.++.. ++..|+||++|++.
T Consensus 6 ~~~~~~~alydy~~~~~~-------eLs~~~Gd~i~v~~~~-~~Ww~~~~~--~g~~G~~P~~yv~~ 62 (68)
T 2k2m_A 6 GALKWVLCNYDFQARNSS-------ELSVKQRDVLEVLDDS-RKWWKVRDP--AGQEGYVPYNILTP 62 (68)
T ss_dssp CCCCEEEESSCBCCCSSS-------BCCBCTTCEEEEEECS-SSEEEEECT--TSCCEEEEGGGEEE
T ss_pred CCCEEEEECccCCCCCCC-------cccCCCCCEEEEEEcC-CCeEEEEeC--CCCEEEEEhhhEEE
Confidence 345689999999998877 9999999999999985 799999874 47899999999865
No 189
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=98.97 E-value=2.2e-09 Score=86.44 Aligned_cols=77 Identities=17% Similarity=0.244 Sum_probs=61.3
Q ss_pred CCCeEEEEeeCCC---CccEEEEecCC---CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcC
Q psy4417 5 PHPLKKILGTGLS---PCGLTVEQDAN---GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSD 76 (440)
Q Consensus 5 ~~~r~v~l~r~g~---~lGiti~~~~~---~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~ 76 (440)
-.++.+.+.|.+. ++||++.+... .+++|..|.++|||+++| |+.||+|++|||.++ .+++++..++++.
T Consensus 5 ~~~~~v~i~k~~~~~~~~Gf~v~~~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~Il~vng~~v~~~~~~~l~~~l~~~- 82 (94)
T 3kzd_A 5 KVTHSIHIEKSDTAADTYGFSLSSVEEDGIRRLYVNSVKETGLASKKG-LKAGDEILEINNRAADALNSSMLKDFLSQP- 82 (94)
T ss_dssp CEEEEEEEEC------CCSEEEEEECSSSSCEEEEEEECTTSHHHHTT-CCTTCEEEEETTEEGGGCCHHHHHHHHHSS-
T ss_pred cceeEEEEEeCCCCcCCcCEEEEecCCCCcCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhCC-
Confidence 4567888888764 79999987432 359999999999999999 999999999999999 5799999999754
Q ss_pred Cceeeeec
Q psy4417 77 GNIQFTIA 84 (440)
Q Consensus 77 ~~v~l~v~ 84 (440)
.++++|.
T Consensus 83 -~l~ltV~ 89 (94)
T 3kzd_A 83 -SLGLLVR 89 (94)
T ss_dssp -EEEEEEE
T ss_pred -eEEEEEE
Confidence 4555543
No 190
>2ydl_A SH3 domain-containing kinase-binding protein 1; signaling protein; 2.05A {Homo sapiens} PDB: 2k6d_A
Probab=98.97 E-value=2.7e-10 Score=86.53 Aligned_cols=54 Identities=30% Similarity=0.783 Sum_probs=48.3
Q ss_pred ccccccccCCCCCCCCCCCccccceeccCCEEEEeecC--CCCceEEEecCCCCCCccccchhHHH
Q psy4417 98 CYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQK--DPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 98 ~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~--d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
.+++|+|||.+..++ +|+|++||++.|++.. +++||.++. ++..|+||+++++.
T Consensus 3 ~~~~Alydy~a~~~~-------eLs~~~Gd~i~vl~~~~~~~gWw~g~~---~g~~G~~P~~yV~~ 58 (69)
T 2ydl_A 3 DYCKVIFPYEAQNDD-------ELTIKEGDIVTLINKDCIDVGWWEGEL---NGRRGVFPDNFVKL 58 (69)
T ss_dssp EEEEESSCBCCCSTT-------BCCBCTTCEEEEEESCCSSTTEEEEEE---TTEEEEEEGGGEEE
T ss_pred cEEEEcccCCCCCCC-------ccccCCCCEEEEEEcCCCCCCEEEEEE---CCcEEEecHHHEEE
Confidence 357899999998877 9999999999999985 899999997 57899999999864
No 191
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.97 E-value=2.4e-09 Score=87.56 Aligned_cols=83 Identities=18% Similarity=0.332 Sum_probs=70.4
Q ss_pred CCCCCeEEEEeeCCCCccEEEEecCC--CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcCCc
Q psy4417 3 HPPHPLKKILGTGLSPCGLTVEQDAN--GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSDGN 78 (440)
Q Consensus 3 ~~~~~r~v~l~r~g~~lGiti~~~~~--~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~~~ 78 (440)
.+.+...|.+. .+.+|||++.++.+ .+++|..|.++|||+++| |+.||.|++|||.++ .++.++..+++..++.
T Consensus 2 ~~g~~~~v~l~-~~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~ 79 (103)
T 1wf7_A 2 SSGSSGSVSLV-GPAPWGFRLQGGKDFNMPLTISSLKDGGKASQAH-VRIGDVVLSIDGISAQGMTHLEAQNKIKACTGS 79 (103)
T ss_dssp CCCCCEEEEEE-SSSCCSCCEEEETTTTEEEEECCCCTTCHHHHTT-CCTTCBEEEETTEECSSCCHHHHHHHHHHCSSE
T ss_pred CCCCEEEEEEe-CCCccCEEEeccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 46677788886 66899999998765 348999999999999999 999999999999999 4568888888888888
Q ss_pred eeeeeccCC
Q psy4417 79 IQFTIAPQG 87 (440)
Q Consensus 79 v~l~v~p~~ 87 (440)
+.|.|....
T Consensus 80 v~l~v~R~g 88 (103)
T 1wf7_A 80 LNMTLQRAS 88 (103)
T ss_dssp EEEEECCCS
T ss_pred EEEEEEeCC
Confidence 999886543
No 192
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.97 E-value=1.7e-09 Score=90.64 Aligned_cols=79 Identities=18% Similarity=0.196 Sum_probs=67.9
Q ss_pred CCeEEEEeeCC-CCccEEEEecCC--------CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHh
Q psy4417 6 HPLKKILGTGL-SPCGLTVEQDAN--------GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVK 74 (440)
Q Consensus 6 ~~r~v~l~r~g-~~lGiti~~~~~--------~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~ 74 (440)
+++.|.+.|.. .+|||+|.++.+ .+++|..|.++|||+ +| |+.||+|++|||.++ .++.++..+++.
T Consensus 14 ~~~~v~l~k~~~~glG~~i~gg~~~~~~~~~~~gv~V~~V~~~spA~-~g-L~~GD~I~~Vng~~v~~~~~~~~~~~l~~ 91 (117)
T 2csj_A 14 EQYTVTLQKDSKRGFGIAVSGGRDNPHFENGETSIVISDVLPGGPAD-GL-LQENDRVVMVNGTPMEDVLHSFAVQQLRK 91 (117)
T ss_dssp EEEEEEEECCSSSTTCEEEECCSSCCCCSSCCCBCEEEEECTTSSHH-HH-BCTTCEEEEESSCBCBTCCHHHHHHHHHH
T ss_pred eEEEEEEEECCCCccCEEEeCCcCCccccCCCCCEEEEEECCCCccc-cc-CCCCCEEEEECCEECCCcCHHHHHHHHhc
Confidence 45678888875 899999998643 359999999999997 77 999999999999999 678999999998
Q ss_pred cCCceeeeeccC
Q psy4417 75 SDGNIQFTIAPQ 86 (440)
Q Consensus 75 ~~~~v~l~v~p~ 86 (440)
.+..+.|.|...
T Consensus 92 ~~~~v~l~v~R~ 103 (117)
T 2csj_A 92 SGKIAAIVVKRP 103 (117)
T ss_dssp SCSEEEEEEEEE
T ss_pred CCCeEEEEEEEC
Confidence 888999988654
No 193
>2d8j_A FYN-related kinase; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.97 E-value=3.2e-10 Score=87.85 Aligned_cols=58 Identities=34% Similarity=0.706 Sum_probs=50.3
Q ss_pred cccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCC------ccccchhHHH
Q psy4417 97 VCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPM------GLVPSQELEE 161 (440)
Q Consensus 97 ~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~------G~iPs~~~~~ 161 (440)
..+++|+|||.+..+. +|+|++||++.|++..+.+||.++.....+.. |+||++++++
T Consensus 7 ~~~~~alydy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~~~~~g~~~~~~~~G~~P~~yv~~ 70 (77)
T 2d8j_A 7 GQYFVALFDYQARTAE-------DLSFRAGDKLQVLDTSHEGWWLARHLEKKGTGLGQQLQGYIPSNYVAE 70 (77)
T ss_dssp CEEEEESSCBCCSSSS-------BCCBCTTCCEEEEECCSSSEEEEEECSSCCSSCCCCSEEEEETTTEEE
T ss_pred CCEEEEccCCCCCCCC-------ccCCCCCCEEEEEECCCCCeEEEEECCCCCcCcccCCceEECHHHeeE
Confidence 4588999999998877 99999999999999999999999996432556 9999999864
No 194
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.97 E-value=1.6e-09 Score=90.98 Aligned_cols=83 Identities=16% Similarity=0.282 Sum_probs=67.9
Q ss_pred CCCCeEEEEee-CCCCccEEEEecCC---CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcCC
Q psy4417 4 PPHPLKKILGT-GLSPCGLTVEQDAN---GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSDG 77 (440)
Q Consensus 4 ~~~~r~v~l~r-~g~~lGiti~~~~~---~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~~ 77 (440)
+.+.+.+.+.| .+.+|||+|.++.+ .+++|..|.++|||+++|+|+.||+|++|||.++ .++.++..+++..++
T Consensus 13 ~~~~~~v~l~~~~~~~lG~~i~g~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~ 92 (119)
T 1x6d_A 13 LDGIHVTILHKEEGAGLGFSLAGGADLENKVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILRQARE 92 (119)
T ss_dssp CTTEEEEEEECCTTSCCSEEEECCSSSSCSSCEEEEECSSSHHHHHTSSCTTCBCCEETTEECSSCCHHHHHHHHHHTTS
T ss_pred CCCeEEEEEEeCCCCccCEEEeCCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 45556666666 46799999998754 4699999999999999999999999999999999 489999999987766
Q ss_pred cee-eeeccC
Q psy4417 78 NIQ-FTIAPQ 86 (440)
Q Consensus 78 ~v~-l~v~p~ 86 (440)
.+. +.+...
T Consensus 93 ~~~~l~v~R~ 102 (119)
T 1x6d_A 93 PRQAVIVTRK 102 (119)
T ss_dssp SSEEEEEEEC
T ss_pred CeEEEEEEcC
Confidence 554 555543
No 195
>1oot_A Hypothetical 40.4 kDa protein in PES4-His2 intergenic region; SH3 domain, sturctural genomics, structural genomics; 1.39A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1ssh_A 2a08_A
Probab=98.97 E-value=3.3e-10 Score=83.41 Aligned_cols=54 Identities=26% Similarity=0.687 Sum_probs=47.7
Q ss_pred cccccccccCCCCCCCCCCCccccceeccCCEEEEeecC--CCCceEEEecCCCCCCccccchhHH
Q psy4417 97 VCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQK--DPNWWQAQLIEPTGPMGLVPSQELE 160 (440)
Q Consensus 97 ~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~--d~~ww~a~~~~~~~~~G~iPs~~~~ 160 (440)
...++|++||.+..++ +|+|++||++.|++.. +.+||.++. ++..|+||+++++
T Consensus 3 ~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~~~Ww~g~~---~g~~G~~P~~yv~ 58 (60)
T 1oot_A 3 SPKAVALYSFAGEESG-------DLPFRKGDVITILKKSDSQNDWWTGRV---NGREGIFPANYVE 58 (60)
T ss_dssp CCEEEESSCBCCCSTT-------BCCBCTTCEEEEEECCSCTTSEEEEEE---TTEEEEEEGGGEE
T ss_pred ccEEEECccCCcCCcC-------EeeEcCCCEEEEEEeCCCCCCeEEEEE---CCEEEEEeHHHEE
Confidence 3568999999998777 9999999999999976 789999998 5789999999874
No 196
>1x2q_A Signal transducing adapter molecule 2; SH3 domain, signal transducing adaptor molecule, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.97 E-value=4.1e-10 Score=89.70 Aligned_cols=57 Identities=33% Similarity=0.733 Sum_probs=50.8
Q ss_pred CccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 95 KPVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 95 ~~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
....+++|+|||.+..++ +|+|++||++.|++..+.+||.++.. +..|+||++|++.
T Consensus 15 ~~~~~~~Alydy~~~~~~-------eLsf~~Gd~i~v~~~~~~~Ww~g~~~---g~~G~~P~~yv~~ 71 (88)
T 1x2q_A 15 KVARKVRALYDFEAVEDN-------ELTFKHGEIIIVLDDSDANWWKGENH---RGIGLFPSNFVTT 71 (88)
T ss_dssp CCCEEEEESSCCCCCSSS-------CCCCCSSCEEEEEECSCSSSEEEEET---TEEEEECGGGEES
T ss_pred CCCeEEEEcccCCCCCcC-------ccCCCCCCEEEEEEeCCCCEEEEEEC---CcEEEEehHHEEE
Confidence 355689999999998877 99999999999999999999999984 5699999999865
No 197
>2j6f_A CD2-associated protein; metal-binding, immune response, SH3, SH2 domain, SH3 zinc-finger, SH3- binding, UBL conjugation pathway; 1.7A {Homo sapiens} PDB: 2j6k_A 2j6o_A 2j7i_A 2krm_A
Probab=98.97 E-value=2.9e-10 Score=84.33 Aligned_cols=54 Identities=22% Similarity=0.535 Sum_probs=48.0
Q ss_pred ccccccccCCCCCCCCCCCccccceeccCCEEEEeec-CCCCceEEEecCCCCCCccccchhHHH
Q psy4417 98 CYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQ-KDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 98 ~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~-~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
+.++|+++|.+..++ +|+|++||++.|++. .+++||.++. ++..|+||++++..
T Consensus 2 ~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~~Ww~g~~---~g~~G~~P~~yv~~ 56 (62)
T 2j6f_A 2 VDYIVEYDYDAVHDD-------ELTIRVGEIIRNVKKLQEEGWLEGEL---NGRRGMFPDNFVKE 56 (62)
T ss_dssp CCEEECSCBCCSSTT-------BCCBCTTCEEEEEEECSSTTEEEEEE---TTEEEEEEGGGEEE
T ss_pred EEEEECccCCcCCcC-------CcCCcCCCEEEEEEecCCCCEEEEEE---CCcEEEechHHEEE
Confidence 457899999998777 999999999999998 8899999996 57899999999853
No 198
>2dbk_A CRK-like protein; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.96 E-value=4.7e-10 Score=89.38 Aligned_cols=57 Identities=19% Similarity=0.424 Sum_probs=49.4
Q ss_pred CccccccccccCCCC--CCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 95 KPVCYMRCLFTYDPK--EDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 95 ~~~~~vRal~dy~p~--~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
....+++|+|+|.|. .++ +|+|++||+++|+++.+.+||.++. ++..|+||++|++.
T Consensus 14 ~~~~~~~alydy~~~a~~~~-------eLsf~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~fP~~yv~~ 72 (88)
T 2dbk_A 14 NGPVFAKAIQKRVPCAYDKT-------ALALEVGDIVKVTRMNINGQWEGEV---NGRKGLFPFTHVKI 72 (88)
T ss_dssp CCCEEEEECSCBCCCTTCSS-------BCCBCTTCEEEEEEECTTSCEEEEC---SSCEEEECTTTEEE
T ss_pred CCCEEEEEcccccCCCCCCC-------cccCCCCCEEEEEEecCCCEEEEEe---CCCEEEEehHHeEE
Confidence 345689999999975 555 8999999999999999999999976 47899999999864
No 199
>1x2k_A OSTF1, osteoclast stimulating factor 1; SH3 domain, human osteoclast stimulating factor 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.96 E-value=3.4e-10 Score=85.58 Aligned_cols=56 Identities=36% Similarity=0.762 Sum_probs=50.1
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
...+++|+|||.+..++ +|+|++||++.|++..+.+||.++. ++..|+||+++++.
T Consensus 6 ~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv~~ 61 (68)
T 1x2k_A 6 SGKVFRALYTFEPRTPD-------ELYFEEGDIIYITDMSDTNWWKGTS---KGRTGLIPSNYVAE 61 (68)
T ss_dssp CSEEEEESSCCCCCSTT-------BCCCCSSCEEEEEECSCSSEEEEES---SSCEEEEETTTEEE
T ss_pred CcEEEEECceECCCCCC-------cccCCCCCEEEEEEcCCCCEEEEEE---CCcEEEEehHHeEE
Confidence 45678999999998877 9999999999999999999999986 57899999999864
No 200
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.96 E-value=9.6e-10 Score=89.76 Aligned_cols=82 Identities=15% Similarity=0.257 Sum_probs=70.3
Q ss_pred CCeEEEEeeCCCCccEEEEecCC--CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcCCceee
Q psy4417 6 HPLKKILGTGLSPCGLTVEQDAN--GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSDGNIQF 81 (440)
Q Consensus 6 ~~r~v~l~r~g~~lGiti~~~~~--~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~~~v~l 81 (440)
+...+.+.+...+|||++.++.+ .+++|..|.++|||+++|.|+.||.|++|||.++ .++.++..+++..+..+.|
T Consensus 11 ~~~~v~l~~~~~g~G~~~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l 90 (103)
T 1wfv_A 11 DYFTVDMEKGAKGFGFSIRGGREYKMDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIELIKSGGRRVRL 90 (103)
T ss_dssp CCEECCEECCTTSSSBCCEEETTTTEEEECCCBCTTSHHHHHCSSCTTCEEEEETTEECSSCCHHHHHHHHHHHCSEECE
T ss_pred eEEEEEEecCCCcCCEEEeccccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEE
Confidence 44567777877889999998754 3699999999999999999999999999999999 5689999999877889999
Q ss_pred eeccCC
Q psy4417 82 TIAPQG 87 (440)
Q Consensus 82 ~v~p~~ 87 (440)
.|....
T Consensus 91 ~v~R~~ 96 (103)
T 1wfv_A 91 LLKRGT 96 (103)
T ss_dssp EEECTT
T ss_pred EEEECC
Confidence 987654
No 201
>2kym_A BUD emergence protein 1; SH3 domain, BEM1P, SH3-CI, STE20P PRR, CDC42P-interacting, S signaling protein; NMR {Lodderomyces elongisporus}
Probab=98.96 E-value=4e-10 Score=95.15 Aligned_cols=58 Identities=26% Similarity=0.449 Sum_probs=52.2
Q ss_pred cccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 97 VCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 97 ~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
.++++|+|||.+..++ +|+|++||++.|++..+.+||.++..+.++..|+||++|++.
T Consensus 3 ~~~~~Alydy~a~~~~-------ELsf~~Gd~i~vl~~~~~~Ww~g~~~~~~g~~G~~P~nyv~~ 60 (120)
T 2kym_A 3 PLFAVTLYEFKAERDD-------ELDVSPGENLSICAHYDYEWFIAKPINRLGGPGLVPVSYVRI 60 (120)
T ss_dssp CCEEEECSCBCCCSTT-------CCCBCTTCEEEEEEEETTTEEEEEESSSCSCCCCEEGGGEEE
T ss_pred CEEEEEcccCCCCCCC-------ccCCCCCCEEEEEEecCCCEEEEEECCCCCCEEEEchHHEEE
Confidence 4689999999998887 999999999999999999999999865567899999999965
No 202
>1kgd_A CASK, peripheral plasma membrane CASK; maguk, guanylate kinase like domain, protein binding; 1.31A {Homo sapiens} SCOP: c.37.1.1
Probab=98.96 E-value=1.4e-09 Score=97.97 Aligned_cols=100 Identities=37% Similarity=0.613 Sum_probs=79.0
Q ss_pred CC-eEEeecCcchhhhhhhhhccccccccCCCceEEecCCCccceeecCCCcccchhhccCccccccCHHHHHHHHHcCc
Q psy4417 261 GK-ICVLDCSPVGLFTFLLGLIEGTVTAKLIPYTYSIPICSWSSFFASDTTRPMRELEENGQNYWFTSREVMERDIQDHK 339 (440)
Q Consensus 261 g~-~~il~~~~~g~~~l~~~l~~~~~~~~~~p~~i~i~~~~~~~f~~~~ttr~~~~~e~~g~~y~f~s~~~f~~~~~~~~ 339 (440)
|+ ++|++.+.+|..+|++.|.... .+... +..++|||+++.++.+|.+|+|++.++|.++++.+.
T Consensus 5 g~~i~i~GpsGsGKSTL~~~L~~~~-----~~~~~---------~~i~~ttr~~~~ge~~g~~~~~~~~~~~~~~~~~~~ 70 (180)
T 1kgd_A 5 RKTLVLLGAHGVGRRHIKNTLITKH-----PDRFA---------YPIPHTTRPPKKDEENGKNYYFVSHDQMMQDISNNE 70 (180)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHHC-----TTTEE---------CCCCEECSCC---CCBTTTBEECCHHHHHHHHHTTC
T ss_pred CCEEEEECCCCCCHHHHHHHHHhhC-----CccEE---------EeeeccCCCCCccccCCCeeEEeCHHHHHHHHHcCC
Confidence 44 4455556666777877665321 12233 556889999999999999999999999999999999
Q ss_pred eeeEEEEcCccccccHHHHHHHHhcCCeeEecCCC
Q psy4417 340 FLEYGEHNGHLYGTHLDSIREVILSGKICVLDCSP 374 (440)
Q Consensus 340 fle~~~~~~~~yGt~~~~i~~~~~~~~~~i~~~~~ 374 (440)
|+||+++.++.||++.+.++++++.|+.++++..+
T Consensus 71 ~l~~~~~~~n~yg~~~~~i~~~l~~g~~vil~id~ 105 (180)
T 1kgd_A 71 YLEYGSHEDAMYGTKLETIRKIHEQGLIAILDVEP 105 (180)
T ss_dssp EEEEEEETTEEEEEEHHHHHHHHHTTCEEEEECCG
T ss_pred ceEEEEEcCccccccHHHHHHHHHCCCeEEEEECH
Confidence 99999999999999999999999999999998643
No 203
>4e6r_A Cytoplasmic protein NCK2; SH3 domain, protein binding, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MLY; 2.20A {Homo sapiens} PDB: 2frw_A 2js0_A
Probab=98.96 E-value=2.8e-10 Score=83.07 Aligned_cols=54 Identities=20% Similarity=0.492 Sum_probs=47.8
Q ss_pred ccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 98 CYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 98 ~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
+.++|+|+|.+..++ +|+|++||++.|++..+.+||.+.. ++..|+||++++++
T Consensus 2 ~~a~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~W~~g~~---~g~~G~~P~~yv~~ 55 (58)
T 4e6r_A 2 IPAFVXFAYVAERED-------ELSLVXGSRVTVMEXCSDGWWRGSY---NGQIGWFPSNYVLE 55 (58)
T ss_dssp EEEEECSCBCCCSTT-------BCCBCTTCEEEEEEECTTSEEEEEE---TTEEEEEEGGGEEE
T ss_pred EEEEECccCCCCCCC-------EeeEeCCCEEEEeEcCCCCEEEEEE---CCcEEEEehHHEEE
Confidence 457899999998877 9999999999999999999999965 46789999999864
No 204
>2kgt_A Tyrosine-protein kinase 6; SH3 domain, SRC kinase, PTK6, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=98.96 E-value=3.2e-10 Score=86.69 Aligned_cols=58 Identities=29% Similarity=0.632 Sum_probs=50.0
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCC---ccccchhHHH
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPM---GLVPSQELEE 161 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~---G~iPs~~~~~ 161 (440)
...+++|+|||.+..++ +|+|++||++.| +..+.+||.++....++.. |+||++++++
T Consensus 9 ~~~~~~alydy~~~~~~-------eLs~~~Gd~i~v-~~~~~~Ww~g~~~~~~g~~~~~G~~P~~yv~~ 69 (72)
T 2kgt_A 9 LGPKYVGLWDFKSRTDE-------ELSFRAGDVFHV-ARKEEQWWWATLLDEAGGAVAQGYVPHNYLAE 69 (72)
T ss_dssp CCCEEECCTTCBCSSTT-------SCBCCTTCCEEE-EEECSSCEEEEEECTTSCEEEEEEECTTTSEE
T ss_pred CCcEEEEcccCCCCCcC-------CcCCCCCCEEEE-eeCCCCEEEEEEcCCCCCEeCCcEEcHhHEEE
Confidence 34688999999998877 999999999999 9889999999986433677 9999999864
No 205
>1awj_A ITK; transferase, regulatory intramolecular complex, kinase; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 2rn8_A 2rna_A 2k79_A 2k7a_A
Probab=98.96 E-value=1.6e-10 Score=89.73 Aligned_cols=57 Identities=25% Similarity=0.490 Sum_probs=50.1
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
...+++|+|||.+..++ +|+|++||++.|++..+.+||.++.. ++..|+||++|+.+
T Consensus 19 ~~~~~~alydy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~~~~~--~g~~G~~P~~yv~~ 75 (77)
T 1awj_A 19 EETLVIALYDYQTNDPQ-------ELALRCDEEYYLLDSSEIHWWRVQDK--NGHEGYAPSSYLVE 75 (77)
T ss_dssp SSSCCCCCCCBCCCCTT-------SCCBCSSSCCSCCCTTSSSBCCCCCS--SSCCCCCBSTTCCC
T ss_pred CceEEEECccCCCCCcC-------CcCCCCCCEEEEEEecCCCCEEEEEC--CCCEEEEehHHEEE
Confidence 34679999999998877 99999999999999999999999862 47899999999864
No 206
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=98.96 E-value=2.6e-09 Score=85.91 Aligned_cols=79 Identities=16% Similarity=0.325 Sum_probs=68.0
Q ss_pred CeEEEEeeCCCCccEEEEecC------CCcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcCCc
Q psy4417 7 PLKKILGTGLSPCGLTVEQDA------NGNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSDGN 78 (440)
Q Consensus 7 ~r~v~l~r~g~~lGiti~~~~------~~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~~~ 78 (440)
...+.+.++..+|||++.++. ..+++|..|.++|||+++|.|+.||+|++|||.++ .++.++..+++..+..
T Consensus 5 ~~~v~l~~~~~~lG~~i~~~~~~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~ 84 (97)
T 2iwn_A 5 TFDVELTKNVQGLGITIAGYIGDKKLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQT 84 (97)
T ss_dssp EEEEEEECBTTBSCEEEECCCCC----CCCCEEEEECTTCHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHTCCSE
T ss_pred EEEEEEecCCCCCcEEEEccCCCCCCCCCCEEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 346777788889999999863 35699999999999999999999999999999999 4688888888888888
Q ss_pred eeeeecc
Q psy4417 79 IQFTIAP 85 (440)
Q Consensus 79 v~l~v~p 85 (440)
+.|.|..
T Consensus 85 v~l~v~r 91 (97)
T 2iwn_A 85 VLLTLMR 91 (97)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 8888864
No 207
>1x2p_A Protein arginine N-methyltransferase 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.95 E-value=3.9e-10 Score=85.24 Aligned_cols=56 Identities=21% Similarity=0.525 Sum_probs=49.6
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
....++|+|||.+..++ +|+|++||++.|++..+.+||.++. ++..|+||+++++.
T Consensus 6 ~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv~~ 61 (68)
T 1x2p_A 6 SGEEFVAIADYAATDET-------QLSFLRGEKILILRQTTADWWWGER---AGCCGYIPANHVGK 61 (68)
T ss_dssp SCCEEEESSCCCCSSTT-------BCCCCTTCEEEEEECCSSSEEEEEC---TTCCEEEESSSEEC
T ss_pred CCCEEEECceECCCCcC-------CcCCCCCCEEEEEEcCCCCEEEEEE---CCeEEEEehHHeEE
Confidence 44678999999998777 9999999999999998999999986 47899999999854
No 208
>2j05_A RAS GTPase-activating protein 1; GTPase activation, SH3 domain, SH2 domain, SRC homology 3, RAS signaling pathway, proto- oncogene, phosphorylation; 1.5A {Homo sapiens} PDB: 2j06_A
Probab=98.95 E-value=5.3e-10 Score=83.75 Aligned_cols=55 Identities=20% Similarity=0.447 Sum_probs=48.2
Q ss_pred ccccccccCCC-CCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHH
Q psy4417 98 CYMRCLFTYDP-KEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELE 160 (440)
Q Consensus 98 ~~vRal~dy~p-~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~ 160 (440)
..++|+|+|.+ ..++ +|+|++||++.|++..+++||.++... ++..|+||+++++
T Consensus 6 ~~~~alydy~~~~~~~-------eLs~~~Gd~i~v~~~~~~gW~~g~~~~-~g~~G~~P~~yv~ 61 (65)
T 2j05_A 6 RRVRAILPYTKVPDTD-------EISFLKGDMFIVHNELEDGWMWVTNLR-TDEQGLIVEDLVE 61 (65)
T ss_dssp CEEEESSCBCCCTTSS-------BCCBCTTCEEEEEEECTTSEEEEEETT-TCCEEEEEGGGEE
T ss_pred cEEEEccccCCCCCCC-------cCcCCCCCEEEEeEecCCCEEEEEECC-CCCEEEEEhHHeE
Confidence 45899999999 7766 999999999999999899999998543 4789999999985
No 209
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=98.95 E-value=1.9e-09 Score=98.42 Aligned_cols=83 Identities=22% Similarity=0.339 Sum_probs=72.1
Q ss_pred CCCCCeEEEEeeC-CCCccEEEEecCC--CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcCC
Q psy4417 3 HPPHPLKKILGTG-LSPCGLTVEQDAN--GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSDG 77 (440)
Q Consensus 3 ~~~~~r~v~l~r~-g~~lGiti~~~~~--~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~~ 77 (440)
.+.+++.|.+.|. +.+|||++.++.. .+++|..|.+||||+++| |+.||+|++|||.++ .+++++..+|+. ++
T Consensus 81 ~~~~~~~v~l~k~~~~~lG~~i~~~~~~~~~~~V~~V~~gspA~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~l~~-~~ 158 (192)
T 3k1r_A 81 RSRKLKEVRLDRLHPEGLGLSVRGGLEFGCGLFISHLIKGGQADSVG-LQVGDEIVRINGYSISSCTHEEVINLIRT-EK 158 (192)
T ss_dssp CCSSCEEEEEETTSTTCCCEEEEEEGGGTEEEEEEEECTTSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHTS-SS
T ss_pred CCCceEEEEEEeCCCCceeEEEEcccccCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHcC-CC
Confidence 3566788999887 6799999988643 469999999999999999 999999999999999 459999999988 88
Q ss_pred ceeeeeccCC
Q psy4417 78 NIQFTIAPQG 87 (440)
Q Consensus 78 ~v~l~v~p~~ 87 (440)
.+.|+|....
T Consensus 159 ~v~l~v~r~g 168 (192)
T 3k1r_A 159 TVSIKVRHIG 168 (192)
T ss_dssp EEEEEEEECC
T ss_pred eEEEEEEECC
Confidence 9999997653
No 210
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=98.95 E-value=3.5e-09 Score=89.84 Aligned_cols=76 Identities=20% Similarity=0.257 Sum_probs=64.7
Q ss_pred EEEeeCCCCccEEEEecCCCcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHh--cCCceeeeecc
Q psy4417 10 KILGTGLSPCGLTVEQDANGNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVK--SDGNIQFTIAP 85 (440)
Q Consensus 10 v~l~r~g~~lGiti~~~~~~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~--~~~~v~l~v~p 85 (440)
+...+.+.+|||++.++.+.+++|..|.++|||+++| |+.||+|++|||.++ .+++++..+|.. .+..+.|+|..
T Consensus 32 ~~~~~~~~~lG~~l~~~~~~gv~V~~V~~gspA~~aG-L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R 110 (124)
T 3tsv_A 32 LVKFRKGDSVGLRLAGGNDVGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQK 110 (124)
T ss_dssp EEEEECSSCCCEEEEECTTSCEEEEEECTTCHHHHTT-CCTTEEEEEETTEECSSCCHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred EEEcCCCCceeEEEecCCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEE
Confidence 4444667899999998767789999999999999999 999999999999999 456999998874 57788888865
Q ss_pred C
Q psy4417 86 Q 86 (440)
Q Consensus 86 ~ 86 (440)
.
T Consensus 111 ~ 111 (124)
T 3tsv_A 111 K 111 (124)
T ss_dssp C
T ss_pred C
Confidence 4
No 211
>2ebp_A SAM and SH3 domain-containing protein 1; proline-glutamate repeat-containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2kea_A
Probab=98.95 E-value=5.2e-10 Score=85.87 Aligned_cols=55 Identities=18% Similarity=0.358 Sum_probs=47.8
Q ss_pred cccccccccCCCC--CCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 97 VCYMRCLFTYDPK--EDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 97 ~~~vRal~dy~p~--~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
...+||+|+|.+. .++ +|+|++||++.|+++.+.+||.++. ++..|+||++|++.
T Consensus 9 ~~~~~alydy~~~~~~~~-------eLs~~~Gd~i~v~~~~~~gWw~g~~---~g~~G~fP~~yv~~ 65 (73)
T 2ebp_A 9 CGRARVHTDFTPSPYDTD-------SLKLKKGDIIDIISKPPMGTWMGLL---NNKVGTFKFIYVDV 65 (73)
T ss_dssp SEEEEECSCBCCCTTCCS-------BCCBCSSCEEEEEECCSSSCEEEEC---SSCEEEECSTTEEE
T ss_pred ceEEEEeeccCCCCCCCC-------ccCCCCCCEEEEEEeCCCCeEEEEE---CCCEEEEeHHHEEE
Confidence 3468999999985 555 9999999999999999999999986 47799999999854
No 212
>2dl8_A SLIT-ROBO RHO GTPase-activating protein 2; SH3 domain, formin-binding protein 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.95 E-value=2.6e-10 Score=87.26 Aligned_cols=57 Identities=23% Similarity=0.460 Sum_probs=50.8
Q ss_pred CccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 95 KPVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 95 ~~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
...++++|+|+|.+..+. +|+|++||++.|++..+.+||.++. ++..|+||+++++.
T Consensus 7 ~~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv~~ 63 (72)
T 2dl8_A 7 GEPIEAIAKFDYVGRTAR-------ELSFKKGASLLLYQRASDDWWEGRH---NGIDGLIPHQYIVV 63 (72)
T ss_dssp CSCEEEEESSCBCCSSSS-------BCCBCTTCEEEEEEEEETTEEEEEE---TTEEEEECSSSEEE
T ss_pred CCCEEEEECccCCcCCCC-------EeccCCCCEEEEEeecCCCEEEEEE---CCEEEEEchHHeEE
Confidence 356789999999998776 9999999999999988889999998 47899999999864
No 213
>1ue9_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=98.95 E-value=6.4e-10 Score=86.85 Aligned_cols=59 Identities=19% Similarity=0.405 Sum_probs=51.3
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCC--CCCCccccchhHHH
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEP--TGPMGLVPSQELEE 161 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~--~~~~G~iPs~~~~~ 161 (440)
...+++|+|+|.+..++ +|+|++||+++|++..+.+||.++..+. .+..|+||++++..
T Consensus 6 ~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~gWw~g~~~~~g~~~~~G~fP~~yv~~ 66 (80)
T 1ue9_A 6 SGEIAQVTSAYVASGSE-------QLSLAPGQLILILKKNTSGWWQGELQARGKKRQKGWFPASHVKL 66 (80)
T ss_dssp CCEEEEECSCCCCCSTT-------BCCCCTTCEEEEEEECSSSEEEEEECSCCSSCCEEEEETTSEEE
T ss_pred CCeEEEECcccCCCCCC-------CCCCCCCCEEEEEEecCCCcEEEEECCCCCCCcEEEEchHHeEE
Confidence 45678999999998877 9999999999999998899999998732 25899999999864
No 214
>2djq_A SH3 domain containing ring finger 2; MUS musculus 0 DAY neonate head cDNA, riken FULL-length enriched library, clone:4831401O22, structural genomics; NMR {Mus musculus}
Probab=98.95 E-value=3.9e-10 Score=85.25 Aligned_cols=56 Identities=30% Similarity=0.598 Sum_probs=49.9
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
...+++|+|+|.+..++ +|+|++||++.|++..+.+||.++. ++..|+||+++++.
T Consensus 6 ~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv~~ 61 (68)
T 2djq_A 6 SGPRAKALCNYRGKNPG-------DLKFNKGDVILLRRQLDENWYQGEI---NGVSGIFPASSVEV 61 (68)
T ss_dssp SCCEEEECSCCCSCCTT-------CCCCCTTCEEEEEECCCSSEEEEEE---TTEEEEEESSSEET
T ss_pred CceEEEECCCCCCCCcC-------CccCCCCCEEEEEEecCCCEEEEEE---CCcEEEeehHHEEE
Confidence 45678999999998777 9999999999999999999999996 57899999999864
No 215
>3c0c_A Endophilin-A2; endocytosis, SH3, voltage-gated calcium channel, endosome, L binding, membrane, phosphoprotein, proto-oncogene, SH3 DOMA; 1.70A {Rattus norvegicus}
Probab=98.95 E-value=4.1e-10 Score=86.40 Aligned_cols=56 Identities=29% Similarity=0.658 Sum_probs=50.2
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
...+++|+|||.+..++ +|+|++||++.|++..+.+||.++. ++..|+||+++++.
T Consensus 12 ~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~W~~g~~---~g~~G~~P~~yv~~ 67 (73)
T 3c0c_A 12 DQPSCKALYDFEPENDG-------ELGFREGDLITLTNQIDENWYEGML---HGQSGFFPLSYVQV 67 (73)
T ss_dssp CSCEEEESSCBCCSSTT-------BCCBCTTCEEEEEEECSSSEEEEEE---TTEEEEEEGGGEEE
T ss_pred CCeEEEECccCCCCCCC-------CccCcCCCEEEEEEecCCCEEEEEE---CCCEEEeChHHEEE
Confidence 45678999999998877 9999999999999998999999987 57899999999854
No 216
>1aww_A ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linked agammaglobulinemia, XLA, BTK, SH3 domain, transferase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 1awx_A 1qly_A
Probab=98.94 E-value=2.7e-10 Score=85.87 Aligned_cols=57 Identities=28% Similarity=0.562 Sum_probs=49.9
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
....++|+|+|.+..+. +|+|++||++.|++..+.+||.++.. ++..|+||++++++
T Consensus 7 ~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~~--~g~~G~~P~~yv~~ 63 (67)
T 1aww_A 7 ELKKVVALYDYMPMNAN-------DLQLRKGDEYFILEESNLPWWRARDK--NGQEGYIPSNYVTE 63 (67)
T ss_dssp CCCEEEBSSCCCCSSSS-------SCCCCSSCEEECCCCCSSSEECCBCT--TSCBCCEETTTBCC
T ss_pred CCeEEEECccCCCCCCC-------CccCCCCCEEEEEEccCCCcEEEEEC--CCCEEEEchHhEEE
Confidence 44578999999998777 99999999999999999999999854 47899999999864
No 217
>2egc_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.94 E-value=4.4e-10 Score=86.77 Aligned_cols=59 Identities=22% Similarity=0.468 Sum_probs=50.3
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCC-CCCccccchhHHHh
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPT-GPMGLVPSQELEER 162 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~-~~~G~iPs~~~~~r 162 (440)
....++|+|||.+. ++ +|+|++||++.|+++.+.+||.++..+.. +..|+||++|+++.
T Consensus 9 ~~~~~~alydy~~~-~~-------eLs~~~Gd~i~vl~~~~~gWw~g~~~~~~~g~~G~~P~~yv~~~ 68 (75)
T 2egc_A 9 LKDVYVSIADYEGD-EE-------TAGFQEGVSMEVLERNPNGWWYCQILDGVKPFKGWVPSNYLEKK 68 (75)
T ss_dssp CCEEEEECSCBCCC-SS-------SCCBCTTCEEEECEECTTSEEEEEECCSSSCEEEEEEGGGEEEC
T ss_pred CCeEEEECCCcCCC-CC-------cCCCCCCCEEEEEEcCCCCeEEEEeCCCCCCcEEEEehHHCEEC
Confidence 34568999999997 66 89999999999999999999999986432 57999999999753
No 218
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.94 E-value=3.4e-09 Score=89.52 Aligned_cols=85 Identities=20% Similarity=0.312 Sum_probs=71.6
Q ss_pred CCCCeEEEEeeC-CCCccEEEEecC------CCcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHh
Q psy4417 4 PPHPLKKILGTG-LSPCGLTVEQDA------NGNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVK 74 (440)
Q Consensus 4 ~~~~r~v~l~r~-g~~lGiti~~~~------~~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~ 74 (440)
..+++.|.+.|+ ..+|||++.++. ...++|..|.+++||+++|.|+.||+|++|||+++ .+++++..+|+.
T Consensus 13 ~~~~~~v~l~k~~~~glG~~l~~~~~~~~~~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~ 92 (122)
T 1v5q_A 13 HTETTEVVLTADPVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRD 92 (122)
T ss_dssp CEEEEEEEECCCSSSSSCEEEECCSCCSSSCSSCCEEEEECTTSHHHHSCCCCTTCCEEEETTEESSSSCHHHHHHHHHH
T ss_pred cceeEEEEEEeCCCCccCEEEecccccCCcCCCCcEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 356778888887 489999999752 24589999999999999999999999999999999 459999999986
Q ss_pred c--CCceeeeeccCCC
Q psy4417 75 S--DGNIQFTIAPQGD 88 (440)
Q Consensus 75 ~--~~~v~l~v~p~~~ 88 (440)
. +..+.|.|.....
T Consensus 93 ~~~g~~v~l~v~R~~~ 108 (122)
T 1v5q_A 93 SSITSKVTLEIEFDVA 108 (122)
T ss_dssp HTTTTCEEEEEEEECC
T ss_pred CCCCCeEEEEEEECCc
Confidence 6 6789998876543
No 219
>1gl5_A Tyrosine-protein kinase TEC; transferase, ATP-binding, SH3 domain, phosphorylation; NMR {Mus musculus} SCOP: b.34.2.1
Probab=98.94 E-value=3.4e-10 Score=85.35 Aligned_cols=56 Identities=23% Similarity=0.539 Sum_probs=49.5
Q ss_pred ccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHHh
Q psy4417 98 CYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEER 162 (440)
Q Consensus 98 ~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~r 162 (440)
.+++|+|+|.+..+. +|+|++||++.|++..+++||.++.. ++..|+||+++++..
T Consensus 3 ~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~~--~g~~G~~P~~yv~~~ 58 (67)
T 1gl5_A 3 EIVVAMYDFQATEAH-------DLRLERGQEYIILEKNDLHWWRARDK--YGSEGYIPSNYVTGK 58 (67)
T ss_dssp SCEEECSCBCCSSSS-------BCCBCTTCEEEEEECSSSSEEEEECS--SSCEEEEETTSEESS
T ss_pred eEEEECccCCCCCCC-------eecCCcCCEEEEEEccCCCcEEEEEC--CCCEEEEEhHhEEEc
Confidence 467899999998877 99999999999999999999999954 478999999998653
No 220
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.94 E-value=3.5e-09 Score=86.22 Aligned_cols=83 Identities=19% Similarity=0.320 Sum_probs=65.8
Q ss_pred CCCCCeEEEEeeC--CCCccEEEEecCC--CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcC
Q psy4417 3 HPPHPLKKILGTG--LSPCGLTVEQDAN--GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSD 76 (440)
Q Consensus 3 ~~~~~r~v~l~r~--g~~lGiti~~~~~--~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~ 76 (440)
.|.+.+.+++.+. ..+|||++.++.+ .+++|..|.++|||+++| |+.||+|++|||.++ .++.++...++ .+
T Consensus 5 ~~~~~~~v~l~~~~~~~~lG~~~~~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~-~~ 82 (101)
T 1uez_A 5 SSGEVRLVSLRRAKAHEGLGFSIRGGSEHGVGIYVSLVEPGSLAEKEG-LRVGDQILRVNDKSLARVTHAEAVKALK-GS 82 (101)
T ss_dssp CSCCCEEECCCCCCTTTCSSEEEEECTTTTCCEEEEEECTTSHHHHHT-CCSSCCEEEETTEECSSCCHHHHHHHSS-SS
T ss_pred CCCccEEEEEEECCCCCcccEEEeCCCCCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHhhc-CC
Confidence 4678888888874 4699999998653 469999999999999999 999999999999999 44444544443 35
Q ss_pred CceeeeeccCC
Q psy4417 77 GNIQFTIAPQG 87 (440)
Q Consensus 77 ~~v~l~v~p~~ 87 (440)
+.+.|+|....
T Consensus 83 ~~v~l~v~R~g 93 (101)
T 1uez_A 83 KKLVLSVYSAG 93 (101)
T ss_dssp SSCCEEECCCC
T ss_pred CeEEEEEEECC
Confidence 67888886543
No 221
>1y0m_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; SH3 domain, hydrolase; 1.20A {Rattus norvegicus} PDB: 1ywp_A 1ywo_A
Probab=98.94 E-value=4.4e-10 Score=83.05 Aligned_cols=54 Identities=26% Similarity=0.597 Sum_probs=47.1
Q ss_pred cccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCc-cccchhHH
Q psy4417 97 VCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMG-LVPSQELE 160 (440)
Q Consensus 97 ~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G-~iPs~~~~ 160 (440)
..+++|+|||.+..++ +|+|++||++.|++..+++||.++.. +..| +||+++++
T Consensus 3 ~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~W~~g~~~---g~~gG~~P~~yv~ 57 (61)
T 1y0m_A 3 KSAVKALFDYKAQRED-------ELTFTKSAIIQNVEKQDGGWWRGDYG---GKKQLWFPSNYVE 57 (61)
T ss_dssp CCCEEESSCBCCCSTT-------BCCBCTTCEEEEEECCSSSEEEEEET---TEEEEEEEGGGEE
T ss_pred CCEEEECcCCCcCCCC-------CcCCcCCCEEEEEEecCCCEEEEEEC---CeEEEEEChHHcE
Confidence 3578999999998877 99999999999999989999999883 4554 99999975
No 222
>2d8h_A SH3YL1 protein; SH3 domain, hypothetical protein SH3YL1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.94 E-value=6.3e-10 Score=86.89 Aligned_cols=58 Identities=21% Similarity=0.638 Sum_probs=50.7
Q ss_pred CCccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCC--CCceEEEecCCCCCCccccchhHHH
Q psy4417 94 IKPVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKD--PNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 94 ~~~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d--~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
.....+++|+|||.+..++ +|+|++||++.|++..+ .+||.++. ++..|+||++|+..
T Consensus 14 ~~~~~~~~al~dy~~~~~~-------eLsf~~Gd~i~v~~~~~~~~~Ww~g~~---~g~~G~~P~~yv~~ 73 (80)
T 2d8h_A 14 LNQPIEVTALYSFEGQQPG-------DLNFQAGDRITVISKTDSHFDWWEGKL---RGQTGIFPANYVTM 73 (80)
T ss_dssp CSSCEEEECSSCEECSSTT-------BCEECTTCEEEEEECCSCSSSEEEEEE---TTEEEEEEGGGCCB
T ss_pred CCCCEEEEECccCCcCCCC-------eeeEcCCCEEEEeECcCCCCCeEEEEE---CCEEEEEchhHeEE
Confidence 3456789999999998877 99999999999999765 89999998 47899999999864
No 223
>2k9g_A SH3 domain-containing kinase-binding protein 1; CIN85, adaptor protein, downregulation, CBL, apoptosis, junction, cytoplasmic vesicle, cytoskeleton; NMR {Homo sapiens}
Probab=98.94 E-value=6.4e-10 Score=85.25 Aligned_cols=56 Identities=29% Similarity=0.748 Sum_probs=49.6
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeecC--CCCceEEEecCCCCCCccccchhHHH
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQK--DPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~--d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
...+++|+|+|.+..++ +|+|++||++.|++.. +.+||.++. ++..|+||+++++.
T Consensus 8 ~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~~~W~~g~~---~g~~G~~P~~yv~~ 65 (73)
T 2k9g_A 8 SKDYCKVIFPYEAQNDD-------ELTIKEGDIVTLINKDCIDVGWWEGEL---NGRRGVFPDNFVKL 65 (73)
T ss_dssp SCEEEEECSCBCCSSTT-------BCCBCTTCEEEEEECCSSSTTEEEEEE---TTEEEEEEGGGEEE
T ss_pred CccEEEECccCCCCCCC-------eeeECCCCEEEEEECCCCCCCEEEEEE---CCeEEEEchHHEEE
Confidence 45688999999998877 9999999999999985 899999997 57899999999853
No 224
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=98.94 E-value=3.7e-09 Score=87.96 Aligned_cols=81 Identities=19% Similarity=0.173 Sum_probs=67.7
Q ss_pred CCCCeEEEEeeCCCCccEEEEecCCCcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhc--CCce
Q psy4417 4 PPHPLKKILGTGLSPCGLTVEQDANGNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKS--DGNI 79 (440)
Q Consensus 4 ~~~~r~v~l~r~g~~lGiti~~~~~~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~--~~~v 79 (440)
.++.+.|++.|+..+|||+|.++. .+.+|.+|.+ +|..+| |++||.|++|||.++ .+|+|++.+|+.+ +..+
T Consensus 10 ~~~~~~V~L~Kg~~G~GFsI~~~~-~g~~V~~I~~--~~~~aG-L~~GD~Il~VNG~~v~~~~h~evv~~lk~~~~G~~v 85 (113)
T 3soe_A 10 AGLLVTIPLIKGPKGFGFAIADSP-TGQKVKMILD--SQWCQG-LQKGDIIKEIYHQNVQNLTHLQVVEVLKQFPVGADV 85 (113)
T ss_dssp HCEEEEEEEECBTTBSSEEEEEET-TEEEEEEESC--GGGSTT-CCTTCEEEEETTEECTTSCHHHHHHHHHHSCTTCEE
T ss_pred CCCEEEEEEEECCCcccEEEeCCC-CCcEEEEecC--hHHhCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCCCEE
Confidence 356788999999999999997643 3467999988 467777 999999999999999 6899999999975 6688
Q ss_pred eeeeccCCC
Q psy4417 80 QFTIAPQGD 88 (440)
Q Consensus 80 ~l~v~p~~~ 88 (440)
.|+|.....
T Consensus 86 ~L~V~R~g~ 94 (113)
T 3soe_A 86 PLLILRGGP 94 (113)
T ss_dssp EEEEEESSC
T ss_pred EEEEEECCc
Confidence 999987543
No 225
>1uhc_A KIAA1010 protein; beta barrel, SH3, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=98.94 E-value=6.1e-10 Score=86.79 Aligned_cols=56 Identities=27% Similarity=0.556 Sum_probs=49.2
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCC----CCceEEEecCCCCCCccccchhHHH
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKD----PNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d----~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
...+++|+|||.+..++ +|+|++||+++|++..+ .+||.++. ++..|+||++|++.
T Consensus 12 ~~~~~~Alydy~~~~~~-------eLs~~~Gd~i~vl~~~~~~~~~~Ww~g~~---~g~~G~~P~~yv~~ 71 (79)
T 1uhc_A 12 GNQVYFAVYTFKARNPN-------ELSVSANQKLKILEFKDVTGNTEWWLAEV---NGKKGYVPSNYIRK 71 (79)
T ss_dssp SSCCEEESSCBCCCSSS-------BCCBCTTCEEEEEESCCTTSCTTEEEEES---SSCEEEEEGGGEEE
T ss_pred CCeEEEECccCCCCCCC-------ccCCCCCCEEEEEECCCCCCCCCeEEEEe---CCCEEEEchHHeEE
Confidence 34578999999998877 99999999999999876 89999985 57899999999865
No 226
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=98.93 E-value=4.4e-09 Score=86.52 Aligned_cols=80 Identities=19% Similarity=0.196 Sum_probs=66.0
Q ss_pred CCCeEEEEeeC-CCCccEEEEecCC--------CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHH
Q psy4417 5 PHPLKKILGTG-LSPCGLTVEQDAN--------GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVV 73 (440)
Q Consensus 5 ~~~r~v~l~r~-g~~lGiti~~~~~--------~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~ 73 (440)
.+++.|.+.|. +.+|||++.++.+ .+++|..|.++|||+ +| |+.||.|++|||.++ .+..++...++
T Consensus 6 ~~~~~v~l~k~~~~glG~~i~~~~~~~~~~~~~~gv~V~~V~~~spA~-ag-l~~GD~I~~vng~~v~~~~~~~~~~~~~ 83 (107)
T 2h2b_A 6 WEQHTVTLHRAPGFGFGIAISGGRDNPHFQSGETSIVISDVLKGGPAE-GQ-LQENDRVAMVNGVSMDNVEHAFAVQQLR 83 (107)
T ss_dssp EEEEEEEEECBTTTBTCEEEEECTTSCCTTTCCCCEEEEEECTTSTTB-TT-BCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred ceeEEEEEEeCCCCccCEEEecCcCCCcccCCCCCEEEEEECCCCchh-hC-CCCCCEEEEECCEECCCccHHHHHHHhh
Confidence 45678899887 4799999997654 369999999999999 88 999999999999999 44566666666
Q ss_pred hcCCceeeeeccC
Q psy4417 74 KSDGNIQFTIAPQ 86 (440)
Q Consensus 74 ~~~~~v~l~v~p~ 86 (440)
..++.+.|.|...
T Consensus 84 ~~g~~v~l~v~R~ 96 (107)
T 2h2b_A 84 KSGKNAKITIRRK 96 (107)
T ss_dssp TCCSEEEEEEEEE
T ss_pred CCCCEEEEEEEEC
Confidence 6788889988654
No 227
>2ysq_A RHO guanine nucleotide exchange factor 9; SH3 domain, CDC42 guanine nucleotide exchange factor (GEF) 9, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.93 E-value=7e-10 Score=86.88 Aligned_cols=57 Identities=19% Similarity=0.511 Sum_probs=50.8
Q ss_pred CccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 95 KPVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 95 ~~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
....+++|+|+|.+..++ +|+|++||++.|++..+.+||.++. ++..|+||++++..
T Consensus 8 ~~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv~~ 64 (81)
T 2ysq_A 8 DSIVSAEAVWDHVTMANR-------ELAFKAGDVIKVLDASNKDWWWGQI---DDEEGWFPASFVRL 64 (81)
T ss_dssp CCCEEEEESSCCCCSSSS-------SCCCCTTCEEEEEECCSSSEEEEEC---SSCEEEEEGGGEEE
T ss_pred CCceEEEEeeeECCCCCC-------cCCCCCCCEEEEEEEcCcCEEEEEE---CCCEEEechHHEEE
Confidence 355789999999998777 9999999999999999999999997 36799999999865
No 228
>2dlp_A KIAA1783 protein; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.93 E-value=5e-10 Score=88.57 Aligned_cols=57 Identities=26% Similarity=0.486 Sum_probs=50.8
Q ss_pred CccccccccccCCCCCCCCCCCccccceeccCCEEEEeec--CCCCceEEEecCCCCCCccccchhHHH
Q psy4417 95 KPVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQ--KDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 95 ~~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~--~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
....+++|+|||.+..++ +|+|++||++.|++. .+.+||.++. ++..|+||++|+..
T Consensus 6 ~~~~~~~al~dy~~~~~~-------eLsf~~Gd~i~v~~~~~~~~~Ww~g~~---~g~~G~fP~~yv~~ 64 (85)
T 2dlp_A 6 SGSGYVIALRSYITDNCS-------LLSFHRGDLIKLLPVATLEPGWQFGSA---GGRSGLFPADIVQP 64 (85)
T ss_dssp SCCCEEEESSCBCCSSSS-------BCCBCTTCEEEECCCSCCCTTEEEEES---SSCEEEEETTSEEE
T ss_pred cCCEEEEECCCCCccCcC-------CccCcCCCEEEEEEccCCCCCeEEEEE---CCEEEEechHHeEE
Confidence 356789999999998877 999999999999987 8999999987 47899999999865
No 229
>2dl3_A Sorbin and SH3 domain-containing protein 1; ponsin, C-CBL-associated protein, CAP, SH3 domain protein 5 SH3P12, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dlm_A
Probab=98.93 E-value=6e-10 Score=84.14 Aligned_cols=56 Identities=27% Similarity=0.510 Sum_probs=49.8
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
....++|+|+|.+..++ +|+|++||++.|++..+.+||.++. ++..|+||+++++.
T Consensus 6 ~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~W~~g~~---~g~~G~~P~~yv~~ 61 (68)
T 2dl3_A 6 SGRPARAKFDFKAQTLK-------ELPLQKGDIVYIYKQIDQNWYEGEH---HGRVGIFPRTYIEL 61 (68)
T ss_dssp CSEEEEESSCBCCSSTT-------BCCBCTTCEEEEEECCSTTEEEEEC---SSCEEEEETTTEEE
T ss_pred CCcEEEECccCCCCCcC-------CccCCCCCEEEEeEecCCCEEEEEE---CCCEEEEchHHEEE
Confidence 45678999999998877 9999999999999998999999985 57899999999854
No 230
>2dbm_A SH3-containing GRB2-like protein 2; EC 2.3.1.-, SH3 domain protein 2A, endophilin 1, EEN-B1, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2knb_B 3iql_A
Probab=98.93 E-value=3.7e-10 Score=86.62 Aligned_cols=56 Identities=32% Similarity=0.678 Sum_probs=50.4
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
...+++|+|||.+..++ +|+|++||++.|++..+.+||.++. ++..|+||++++..
T Consensus 6 ~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv~~ 61 (73)
T 2dbm_A 6 SGPCCRALYDFEPENEG-------ELGFKEGDIITLTNQIDENWYEGML---HGHSGFFPINYVEI 61 (73)
T ss_dssp CCCEEEESSCBCCCSTT-------CCCBCTTCEEECCBCSSSSEEEEEE---TTEEEEEESSSEEE
T ss_pred CCCEEEEccccCCCCCC-------CccCCCCCEEEEEEecCCCEEEEEE---CCCEEEechHHEEE
Confidence 45688999999998877 9999999999999998999999997 57899999999865
No 231
>4glm_A Dynamin-binding protein; SH3 domain, DNMBP, structural genomics, structural genomics consortium, SGC, SRC homology 3 domains, cell junctions; 1.90A {Homo sapiens}
Probab=98.93 E-value=4.9e-10 Score=85.49 Aligned_cols=56 Identities=25% Similarity=0.535 Sum_probs=49.3
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
...+++|+|||.+..++ +|+|++||++.|++..+.+||.++. ++..|+||+++++.
T Consensus 12 ~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~W~~g~~---~g~~G~~P~~yv~~ 67 (72)
T 4glm_A 12 ALTYGVALYRFQALEPN-------ELDFEVGDKIRILATLEDGWLEGSL---KGRTGIFPYRFVKL 67 (72)
T ss_dssp -CCEEEESSCBCCCSTT-------BCCBCTTCEEEEEEECSTTEEEEEE---TTEEEEEEGGGEEE
T ss_pred CCeEEEECccCCCCCCC-------cCCCCCCCEEEEEEccCCCEEEEEE---CCcEEEEChHHeEE
Confidence 45678999999998877 9999999999999999999999996 47899999999854
No 232
>2o9s_A Ponsin; SH3 domain, signaling protein; 0.83A {Homo sapiens} PDB: 2o31_A 2o9v_A 2o2w_A
Probab=98.93 E-value=5.3e-10 Score=84.23 Aligned_cols=57 Identities=19% Similarity=0.460 Sum_probs=49.9
Q ss_pred cccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 97 VCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 97 ~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
...++|+|||.+..++ +|+|++||++.|++..+.+||.++..+ .+..|+||+++++.
T Consensus 6 ~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~~~-~g~~G~~P~~yv~~ 62 (67)
T 2o9s_A 6 TGEAIAKFNFNGDTQV-------EMSFRKGERITLLRQVDENWYEGRIPG-TSRQGIFPITYVDV 62 (67)
T ss_dssp SEEEEECSCBCCSSTT-------BCCBCTTCEEEEEEECSSSEEEEECTT-SSCEEEEEGGGEEE
T ss_pred CEEEEECccCCcCCcC-------ccCCCCCCEEEEEEecCCCEEEEEECC-CCCEEEEChHHeEE
Confidence 3568999999998877 999999999999999899999999854 35899999999854
No 233
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.92 E-value=2.6e-09 Score=85.81 Aligned_cols=76 Identities=16% Similarity=0.378 Sum_probs=64.3
Q ss_pred EEeeCCCCccEEEEecCC--CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcCCceeeeeccC
Q psy4417 11 ILGTGLSPCGLTVEQDAN--GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSDGNIQFTIAPQ 86 (440)
Q Consensus 11 ~l~r~g~~lGiti~~~~~--~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~~~v~l~v~p~ 86 (440)
...+++.+|||++.++.+ .+++|..|.++|||+++| |+.||.|++|||.++ .++.++..+|+..++.+.|.+...
T Consensus 10 ~~~~~~~~lG~~l~~g~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~R~ 88 (94)
T 1vb7_A 10 VDVAGPAPWGFRISGGRDFHTPIIVTKVTERGKAEAAD-LRPGDIIVAINGQSAENMLHAEAQSKIRQSASPLRLQLDRS 88 (94)
T ss_dssp EEECSSSCCSBCCEEETTTTEEEECCCBCTTSSHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCCSSEEEEEECC
T ss_pred EEecCCCCccEEEecccCCCCCeEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEEEC
Confidence 333566799999998654 358999999999999999 999999999999999 456999999997778888988765
Q ss_pred C
Q psy4417 87 G 87 (440)
Q Consensus 87 ~ 87 (440)
.
T Consensus 89 g 89 (94)
T 1vb7_A 89 S 89 (94)
T ss_dssp C
T ss_pred C
Confidence 3
No 234
>2ed0_A ABL interactor 2; coiled coil, cytoskeleton, nuclear protein, phosphorylation, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.92 E-value=6.9e-10 Score=86.29 Aligned_cols=56 Identities=21% Similarity=0.594 Sum_probs=49.8
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
...+++|+|+|.+..++ +|+|++||++.|++..+.+||.++. ++..|+||+++++.
T Consensus 16 ~~~~~~al~dy~~~~~~-------eLsf~~Gd~i~v~~~~~~gWw~g~~---~g~~G~~P~~yv~~ 71 (78)
T 2ed0_A 16 YLEKVVAIYDYTKDKED-------ELSFQEGAIIYVIKKNDDGWYEGVM---NGVTGLFPGNYVES 71 (78)
T ss_dssp CSEEEEECSCBCCSSTT-------BCCBCSSCEEEEEEECSSSEEEEEE---TTEEEEEETTSEEE
T ss_pred cCEEEEECccCCccCcC-------cccccCCCEEEEEEeCCCCEEEEEE---CCcEEEeChHHEEE
Confidence 44578999999998877 9999999999999999999999996 57899999999854
No 235
>1ugv_A KIAA0621, olygophrenin-1 like protein; beta barrel, GRAF protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=98.92 E-value=4.3e-10 Score=86.09 Aligned_cols=56 Identities=27% Similarity=0.638 Sum_probs=48.9
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEee-cCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILN-QKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~-~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
...+++|+|+|.+..++ +|+|++||++.|++ ..+.+||.++. ++..|+||++|++.
T Consensus 9 ~~~~~~alydy~~~~~~-------eLsf~~Gd~i~v~~~~~~~~Ww~g~~---~g~~G~~P~~yv~~ 65 (72)
T 1ugv_A 9 PFRKAKALYACKAEHDS-------ELSFTAGTVFDNVHPSQEPGWLEGTL---NGKTGLIPENYVEF 65 (72)
T ss_dssp SCCCEEESSCBCCCSSS-------BCCBCTTCEEBSCCBCSSTTEEEEES---SSCEEEEEGGGEEE
T ss_pred CccEEEEccccCCcCCC-------EeCCcCCCEEEEEEecCCCCeEEEEE---CCcEEEecHHHEEE
Confidence 34678999999998877 99999999999998 57889999985 57899999999854
No 236
>3u23_A CD2-associated protein; structural genomics, structural genomics consortium, SGC, BE barrel, adaptor protein, protein binding; 1.11A {Homo sapiens} PDB: 2krn_A
Probab=98.92 E-value=3e-10 Score=84.89 Aligned_cols=56 Identities=30% Similarity=0.663 Sum_probs=48.6
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
...+++|+|||.+..+. +|+|++||++.|++..+.+||.++. ++..|+||++++++
T Consensus 6 ~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~W~~g~~---~g~~G~~P~~yv~~ 61 (65)
T 3u23_A 6 KKRQCKVLFEYIPQNED-------ELELKVGDIIDINEEVEEGWWSGTL---NNKLGLFPSNFVKE 61 (65)
T ss_dssp --CEEEECSCBCCSSTT-------BCCBCTTCEEEEEEEEETTEEEEEE---TTEEEEEEGGGEEE
T ss_pred CCeEEEEeeeeCCCCcC-------CcCCCCCCEEEEEEecCCCEEEEEE---CCCEEEeehHHEEE
Confidence 34678999999998877 9999999999999988899999996 47899999999854
No 237
>1i07_A Epidermal growth factor receptor kinase substrate EPS8; hormone/growth factor; 1.80A {Mus musculus} SCOP: b.34.2.1 PDB: 1aoj_A 1i0c_A
Probab=98.92 E-value=4.2e-10 Score=82.83 Aligned_cols=54 Identities=26% Similarity=0.631 Sum_probs=47.8
Q ss_pred ccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 98 CYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 98 ~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
.+++|+|||.+..++ +|+|++||++.|++. +++||.++.. ++..|+||++++..
T Consensus 2 ~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~-~~~Ww~~~~~--~g~~G~~P~~yv~~ 55 (60)
T 1i07_A 2 KYAKSKYDFVARNSS-------ELSVMKDDVLEILDD-RRQWWKVRNA--SGDSGFVPNNILDI 55 (60)
T ss_dssp CEEEESSCBCCSSTT-------BCCBCTTCEEEECGG-GCCEEEEECT--TSCEEEEEGGGEEE
T ss_pred eEEEECccCCCCCCC-------cccCCCCCEEEEEEc-CCCeEEEEEC--CCCEEEEEHHHeEE
Confidence 367899999998877 999999999999999 8999999865 37899999999854
No 238
>3ngp_A Spectrin alpha chain, brain; beta barrel, structural protein; 1.08A {Gallus gallus} PDB: 1e7o_A 1e6g_A 1e6h_A 1uue_A 1h8k_A 2lj3_A 1aey_A 1m8m_A 1shg_A 1u06_A 2nuz_A 2cdt_A 1hd3_A 2f2v_A 2f2w_A 2jm8_A 2jm9_A 2jma_A 3m0r_A 3m0p_A ...
Probab=98.92 E-value=5.1e-10 Score=82.79 Aligned_cols=54 Identities=31% Similarity=0.708 Sum_probs=48.4
Q ss_pred cccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHH
Q psy4417 97 VCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELE 160 (440)
Q Consensus 97 ~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~ 160 (440)
...++|+++|.+..+. +|+|++||++.|++..+++||.++. ++..|+||+++++
T Consensus 6 ~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~~~~---~g~~G~~P~~yv~ 59 (62)
T 3ngp_A 6 KELVLVLYDYQEKSPR-------ELTVKKGDILTLLNSTNKDWWKIEV---NGRQGFVPAAYLK 59 (62)
T ss_dssp CCEEEECSCBCCCSTT-------BCCBCTTCEEEEEECCSSSEEEEEE---TTEEEEEEGGGEE
T ss_pred CEEEEECcCCCCCCCC-------CccCCCCCEEEEeEecCCCeEEEEE---CCEEEEEEHHHEE
Confidence 3578999999998777 9999999999999999999999986 4789999999875
No 239
>2cre_A HEF-like protein; SH3 domain, SRC homology 3 domain, beta barrel, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.92 E-value=5.9e-10 Score=84.89 Aligned_cols=56 Identities=38% Similarity=0.699 Sum_probs=49.4
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeecC---CCCceEEEecCCCCCCccccchhHHH
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQK---DPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~---d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
...+++|+|||.+..++ +|+|++||++.|++.. +.+||.++. ++..|+||++++..
T Consensus 6 ~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~~~~Ww~g~~---~g~~G~~P~~yv~~ 64 (71)
T 2cre_A 6 SGLLARALYDNCPDCSD-------ELAFSRGDILTILEQHVPESEGWWKCLL---HGRQGLAPANRLQI 64 (71)
T ss_dssp CCEEEEESSCCCCSSSS-------BCCCCSSCCEEEEESCCTTSTTEEEEES---SSCCEEEETTTEEE
T ss_pred CcEEEEECcccCcCCCC-------CCCCCCCCEEEEeEcCCCCCCCcEEEEE---CCCEEEEehHHEEE
Confidence 45689999999998777 9999999999999987 899999985 57899999999854
No 240
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=98.92 E-value=3.4e-09 Score=96.17 Aligned_cols=81 Identities=20% Similarity=0.297 Sum_probs=72.0
Q ss_pred CCeEEEEeeCCCCccEEEEecCC-------CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcC
Q psy4417 6 HPLKKILGTGLSPCGLTVEQDAN-------GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSD 76 (440)
Q Consensus 6 ~~r~v~l~r~g~~lGiti~~~~~-------~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~ 76 (440)
+.+.+++.|++.+|||++.++.+ .+++|..|.++|||+++|+|+.||+|++|||.++ .++.++..+++..+
T Consensus 5 ~~~~v~l~~~~~~lG~~i~~g~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g 84 (196)
T 3gsl_A 5 EYEEITLERGNSGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKEAG 84 (196)
T ss_dssp EEEEEEEECBTTBSSEEEECCTTSCTTSSCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSC
T ss_pred EEEEEEEEECCCCCCEEEEcccCCcccCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 45789999999999999998753 4699999999999999999999999999999999 57888888888888
Q ss_pred CceeeeeccC
Q psy4417 77 GNIQFTIAPQ 86 (440)
Q Consensus 77 ~~v~l~v~p~ 86 (440)
..+.|++...
T Consensus 85 ~~v~l~v~r~ 94 (196)
T 3gsl_A 85 SIVRLYVMRR 94 (196)
T ss_dssp SEEEEEEEEE
T ss_pred CcEEEEEEec
Confidence 9999988653
No 241
>2a28_A BZZ1 protein; SH3 domain, signaling protein; 1.07A {Saccharomyces cerevisiae}
Probab=98.92 E-value=6.8e-10 Score=79.90 Aligned_cols=50 Identities=24% Similarity=0.622 Sum_probs=45.2
Q ss_pred ccccccCCCCCCCCCCCccccceeccCCEEEEeecCC-CCceEEEecCCCCCCccccchhH
Q psy4417 100 MRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKD-PNWWQAQLIEPTGPMGLVPSQEL 159 (440)
Q Consensus 100 vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d-~~ww~a~~~~~~~~~G~iPs~~~ 159 (440)
++|+++|.+..++ +|+|++||++.|+...+ .+||.++. ++..|+||++++
T Consensus 3 ~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~~W~~g~~---~g~~G~~P~~yv 53 (54)
T 2a28_A 3 MEAIYAYEAQGDD-------EISIDPGDIITVIRGDDGSGWTYGEC---DGLKGLFPTSYC 53 (54)
T ss_dssp EEBCSCBCCCSTT-------BCCBCTTCEEEEEECCCSSSEEEEEE---TTEEEEEEGGGB
T ss_pred EEECccCCcCCCC-------CccCCCCCEEEEEEecCCCCEEEEEE---CCeEEEeeHHHc
Confidence 6899999998877 99999999999999885 79999998 578999999986
No 242
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.92 E-value=5.7e-09 Score=84.83 Aligned_cols=81 Identities=17% Similarity=0.269 Sum_probs=67.4
Q ss_pred CCCeEEEEeeCCC-CccEEEEecCC--CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcCCce
Q psy4417 5 PHPLKKILGTGLS-PCGLTVEQDAN--GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSDGNI 79 (440)
Q Consensus 5 ~~~r~v~l~r~g~-~lGiti~~~~~--~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~~~v 79 (440)
..++.|.+.|.+. .|||++.+... .+++|..|.++|||+++| |+.||.|++|||.++ .++.++...++. +..+
T Consensus 9 ~~~~~v~l~~~~~~~lG~~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~-~~~v 86 (100)
T 2eeh_A 9 DIIHSVRVEKSPAGRLGFSVRGGSEHGLGIFVSKVEEGSSAERAG-LCVGDKITEVNGLSLESTTMGSAVKVLTS-SSRL 86 (100)
T ss_dssp CEECCEEECCCSSSSCSEEEECCTTTTCCEEEEEECTTSHHHHHT-CCSSCEEEEETTEECSSCCHHHHHHHHHS-CSSE
T ss_pred CeEEEEEEEECCCCCccEEEEccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHhhcC-CCEE
Confidence 4466788888765 59999987643 569999999999999999 999999999999999 347888888876 7888
Q ss_pred eeeeccCC
Q psy4417 80 QFTIAPQG 87 (440)
Q Consensus 80 ~l~v~p~~ 87 (440)
.|.|....
T Consensus 87 ~l~v~R~g 94 (100)
T 2eeh_A 87 HMMVRRMG 94 (100)
T ss_dssp EEEEEECS
T ss_pred EEEEEECC
Confidence 99887643
No 243
>2kxd_A 11-MER peptide, SH3 domain of spectrin alpha CHAI; alpha spectrin SH3 domain, SPC-S19P20S circular permutant, S protein; NMR {Synthetic}
Probab=98.92 E-value=6.3e-10 Score=85.34 Aligned_cols=53 Identities=25% Similarity=0.574 Sum_probs=46.6
Q ss_pred ccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 98 CYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 98 ~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
|.+||+|+|.+ .+. +|+|++||++.|++..+++||.++. ++..|+||+++++.
T Consensus 1 m~a~alydy~~-~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv~~ 53 (73)
T 2kxd_A 1 MGAPPLPPYSA-GGR-------EVTMKKGDILTLLNSTNKDWWKVEV---NDRQGFVPAAYVKK 53 (73)
T ss_dssp CCCCCCCSSCC-CSC-------CCCBCTTCEEEEEECCSSSEEEEEE---TTEEEEEEGGGEEE
T ss_pred CeEEEeeeeCC-CCC-------EeeEcCCCEEEEEEecCCCEEEEEE---CCCEEEEehHHeEE
Confidence 35789999997 555 9999999999999999999999986 57899999999864
No 244
>1x6g_A Megakaryocyte-associated tyrosine-protein kinase; MATK, CTK, HYL, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.92 E-value=1e-09 Score=86.01 Aligned_cols=58 Identities=24% Similarity=0.414 Sum_probs=49.3
Q ss_pred cccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCC-CceEEEecCCCCCCccccchhHHHh
Q psy4417 97 VCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDP-NWWQAQLIEPTGPMGLVPSQELEER 162 (440)
Q Consensus 97 ~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~-~ww~a~~~~~~~~~G~iPs~~~~~r 162 (440)
...++|+|||.+..++ +|+|++||++.|++..+. +||.++... ++..|+||++|++++
T Consensus 17 ~~~~~Alydy~~~~~~-------eLsf~~Gd~i~v~~~~~~~~Ww~g~~~~-~g~~G~~P~~yv~~~ 75 (81)
T 1x6g_A 17 GTQCITKCEHTRPKPG-------ELAFRKGDVVTILEACENKSWYRVKHHT-SGQEGLLAAGALRER 75 (81)
T ss_dssp TCEEEESSCBSSCCTT-------CCCBCTTCEEEEEECCCSSSEEEEEETT-TCCEEEEEGGGEEEC
T ss_pred CCEEEECCCCCcCCCC-------CCCCCCCCEEEEEeccCCCCeEEEEeCC-CCCEEEEehHHEEEc
Confidence 3468899999998877 999999999999997765 999998632 478999999999764
No 245
>2eqi_A Phospholipase C, gamma 2; SH3 domain, PLCG2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.92 E-value=4.9e-10 Score=84.95 Aligned_cols=57 Identities=21% Similarity=0.487 Sum_probs=49.3
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
....++|+|+|.+..++ +|+|++||++.|++..+.+||.++.. .+..|+||+++++.
T Consensus 6 ~~~~~~alydy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~~--~~~~G~~P~~yv~~ 62 (69)
T 2eqi_A 6 SGRTVKALYDYKAKRSD-------ELTFCRGALIHNVSKEPGGWWKGDYG--TRIQQYFPSNYVED 62 (69)
T ss_dssp CCCEEEESSCBCCCSSS-------CCCBCTTCEEESCCCCSSSCEEEEET--TEEEEEECGGGEEE
T ss_pred CCcEEEECeeECCCCcC-------ccCCCCCCEEEEEEcCCCCeEEEEEC--CCCEEEEchHHcEE
Confidence 45678999999998877 99999999999999999999999974 23459999999864
No 246
>2dl7_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.92 E-value=6.5e-10 Score=85.26 Aligned_cols=56 Identities=36% Similarity=0.873 Sum_probs=49.2
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeec---CCCCceEEEecCCCCCCccccchhHHH
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQ---KDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~---~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
...+++|+|||.+..++ +|+|++||+++|++. .+.+||.++. ++..|+||+++++.
T Consensus 7 ~~~~~~alydy~~~~~~-------eLsf~~Gd~i~v~~~~~~~~~~Ww~g~~---~g~~G~~P~~yv~~ 65 (73)
T 2dl7_A 7 GVCFVKALYDYEGQTDD-------ELSFPEGAIIRILNKENQDDDGFWEGEF---NGRIGVFPSVLVEE 65 (73)
T ss_dssp CCEEEEESSCBCCSSTT-------BCCBCTTCEEEEEECCCSSSSSCEEEEE---TTEEEEECSSSEEE
T ss_pred CCEEEEECccCCcCCCC-------cCCCCCCCEEEEEECCCCCCCCcEEEEE---CCCEEEEChHHEEE
Confidence 34678999999998877 999999999999997 4889999996 57899999999864
No 247
>2v1q_A SLA1, cytoskeleton assembly control protein SLA1; structural genomics, phosphorylation, structural protein, yeast, SH3 domain; 1.2A {Saccharomyces cerevisiae} PDB: 1z9z_A
Probab=98.92 E-value=8.1e-10 Score=81.19 Aligned_cols=55 Identities=31% Similarity=0.628 Sum_probs=48.1
Q ss_pred ccccccccCCCCCCCCCCCccccceeccCCEEEEeec-CCCCceEEEecCCCCCCccccchhHH
Q psy4417 98 CYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQ-KDPNWWQAQLIEPTGPMGLVPSQELE 160 (440)
Q Consensus 98 ~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~-~d~~ww~a~~~~~~~~~G~iPs~~~~ 160 (440)
.+++|++||.+..++ +|+|++||++.|++. .+++||.++... ++..|+||+++++
T Consensus 3 ~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~~Ww~g~~~~-~g~~G~~P~~yv~ 58 (60)
T 2v1q_A 3 ERGIVQYDFMAESQD-------ELTIKSGDKVYILDDKKSKDWWMCQLVD-SGKSGLVPAQFIE 58 (60)
T ss_dssp CEEEECSCBCCCSTT-------BCCBCTTCEEEEEESSSCSSEEEEEETT-TCCEEEEEGGGEE
T ss_pred cEEEEeeeECCCCCC-------CccCCCCCEEEEEeCCCCCCCEEEEECC-CCCEEEEEHHHEE
Confidence 467999999998877 999999999999998 589999999853 4789999999874
No 248
>2oaw_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.90A {Gallus gallus} PDB: 2rot_A 2rmo_A 2kr3_A
Probab=98.92 E-value=3.8e-10 Score=84.34 Aligned_cols=56 Identities=25% Similarity=0.602 Sum_probs=48.1
Q ss_pred ccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCC--C---CCCccccchhHH
Q psy4417 98 CYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEP--T---GPMGLVPSQELE 160 (440)
Q Consensus 98 ~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~--~---~~~G~iPs~~~~ 160 (440)
.+++|+|+|.+..+. +|+|++||++.|++..+++||.++.... + +..|+||+++++
T Consensus 2 ~~~~alydy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~~~~~~g~~~g~~G~~P~~yv~ 62 (65)
T 2oaw_A 2 ELVLALYDYQEKSPR-------EVTMKKGDILTLLNSTNKDWWKVEVKITVNGKTYERQGFVPAAYVK 62 (65)
T ss_dssp EEEEECSCBCCSSTT-------BCCBCTTCEEEEEECCSSSEEEEEEEEEETTEEEEEEEEEEGGGEE
T ss_pred cEEEEcccCCccCCC-------CCCCCCCCEEEEEEcCCCCEEEEEEccccCCCcCCcEEEEchHHeE
Confidence 367899999998877 9999999999999999999999998511 1 678999999875
No 249
>1z9q_A Neutrophil cytosol factor 4; oxidoreductase activator; NMR {Homo sapiens}
Probab=98.91 E-value=2.8e-10 Score=88.78 Aligned_cols=56 Identities=20% Similarity=0.478 Sum_probs=50.1
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
...+++|+|||.+..++ +|+|++||++.|++..+++||.++. ++..|+||++|++.
T Consensus 17 ~~~~~~Alydy~a~~~~-------eLsf~~Gd~I~Vl~~~~~gWw~g~~---~g~~G~fP~nyV~~ 72 (79)
T 1z9q_A 17 AAPRAEALFDFTGNSKL-------ELNFKAGDVIFLLSRINKDWLEGTV---RGATGIFPLSFVKI 72 (79)
T ss_dssp SCCCEEESSCCCCSSTT-------BCCCCTTCCBCCCEESSSSEEEEEE---TTEEEEEEGGGEEE
T ss_pred CceEEEEcCccCCCCCC-------cccccCCCEEEEeEecCCCEEEEEE---CCeEEEecHHHEEE
Confidence 45678999999998877 9999999999999999999999997 47899999999854
No 250
>3rnj_A Brain-specific angiogenesis inhibitor 1-associate 2; structural genomics, structural genomics consortium, SGC, BE barrel; HET: EDT; 1.50A {Homo sapiens} SCOP: b.34.2.1
Probab=98.91 E-value=8.3e-10 Score=83.15 Aligned_cols=57 Identities=19% Similarity=0.359 Sum_probs=47.9
Q ss_pred ccccccccccCCCCCCCCCCCcccc-ceeccCCEEEEeec-CCCCceEEEecCCCCCCccccchhHH
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIG-LAFNHGDILQILNQ-KDPNWWQAQLIEPTGPMGLVPSQELE 160 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~-L~f~~GdIl~V~~~-~d~~ww~a~~~~~~~~~G~iPs~~~~ 160 (440)
...+++|+|+|.+..++ + |+|++||++.|+.. .+.+||.++... ++..|++|+++++
T Consensus 6 ~~~~~~al~dy~~~~~~-------e~Lsf~~Gd~i~v~~~~~~~gW~~g~~~~-~g~~G~fP~~yv~ 64 (67)
T 3rnj_A 6 GRMRVKAIFSHAAGDNS-------TLLSFKEGDLITLLVPEARDGWHYGESEK-TKMRGWFPFSYTR 64 (67)
T ss_dssp CCCEEEESSCBCCCSCT-------TBCCBCTTCEEEECSSSCBTTEEEEEETT-TCCEEEEEGGGEE
T ss_pred CCeEEEEccccCCCCCC-------CCccCCCCCEEEEeeccCCCCCEEEEECC-CCCEEEEEHHHeE
Confidence 45688999999997765 5 99999999999964 688999999643 4789999999975
No 251
>1yn8_A NBP2, NAP1-binding protein 2; SH3 domain, unknown function; 1.70A {Saccharomyces cerevisiae}
Probab=98.91 E-value=4.7e-10 Score=82.18 Aligned_cols=55 Identities=25% Similarity=0.475 Sum_probs=48.1
Q ss_pred ccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHH
Q psy4417 98 CYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELE 160 (440)
Q Consensus 98 ~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~ 160 (440)
..++|+|||.+..++ +|+|++||++.|++..+.+||.++..+ ++..|+||+++++
T Consensus 2 ~~~~al~d~~~~~~~-------eLs~~~Gd~i~v~~~~~~gW~~g~~~~-~g~~G~~P~~yv~ 56 (59)
T 1yn8_A 2 QRAVALYDFEPENDN-------ELRLAEGDIVFISYKHGQGWLVAENES-GSKTGLVPEEFVS 56 (59)
T ss_dssp EEEEECSCBCCCSTT-------BCCBCTTCEEEEEEEEETTEEEEECTT-SSCEEEEEGGGEE
T ss_pred CEEEECccCCCCCCC-------CcCCCCCCEEEEEEcCCCCeEEEEECC-CCCEEEEehHHeE
Confidence 357899999998777 999999999999999899999998753 3689999999874
No 252
>1zuu_A BZZ1 protein; SH3 domain, unknown function; 0.97A {Saccharomyces cerevisiae} SCOP: b.34.2.1
Probab=98.91 E-value=6.3e-10 Score=81.22 Aligned_cols=55 Identities=24% Similarity=0.495 Sum_probs=47.0
Q ss_pred ccccccccCCCCCCCCCCCccccceeccCCEEEEeecCC-CCceEEEecCCCCCCccccchhHH
Q psy4417 98 CYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKD-PNWWQAQLIEPTGPMGLVPSQELE 160 (440)
Q Consensus 98 ~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d-~~ww~a~~~~~~~~~G~iPs~~~~ 160 (440)
+.++|+|+|.+..++ +|+|++||++.|++..+ .+||.++... ++..|+||+++++
T Consensus 2 ~~~~alydy~~~~~~-------eLs~~~Gd~i~v~~~~~~~~W~~g~~~~-~g~~G~~P~~yv~ 57 (58)
T 1zuu_A 2 MENKVLYAYVQKDDD-------EITITPGDKISLVARDTGSGWTKINNDT-TGETGLVPTTYIR 57 (58)
T ss_dssp -CCEECSCBCCCSTT-------BCCBCTTCCEEEEECCSSSSEEEEEETT-TTEEEEEEGGGEE
T ss_pred CEEEEeeeECCcCCC-------cccCCCCCEEEEeEcCCCCCCEEEEECC-CCCEEEEEHHHEE
Confidence 457899999998877 99999999999999876 7999999852 3679999999863
No 253
>4esr_A Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domain, dynamin-2, protei binding, chronic myeloid leukemia; 1.53A {Homo sapiens}
Probab=98.91 E-value=4.7e-10 Score=84.99 Aligned_cols=56 Identities=20% Similarity=0.582 Sum_probs=49.5
Q ss_pred ccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHHh
Q psy4417 98 CYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEER 162 (440)
Q Consensus 98 ~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~r 162 (440)
..++|+|||.+..+. +|+|++||++.|++..+.+||.++.. ++..|+||++++++.
T Consensus 7 ~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~~--~g~~G~~P~~yv~~~ 62 (69)
T 4esr_A 7 PTVVALYDYTANRSD-------ELTIHRGDIIRVFFKDNEDWWYGSIG--KGQEGYFPANHVASE 62 (69)
T ss_dssp CEEEESSCBCCCSTT-------BCCBCTTCEEEEEEECSSSEEEEEEE--TTEEEEEEGGGEEEH
T ss_pred CEEEECccCCCCCcC-------cCCCCCCCEEEEEEecCCCeEEEEeC--CCCEEEEchHHeEEC
Confidence 468999999998777 99999999999999999999999873 467999999998764
No 254
>2yuo_A CIP85, RUN and TBC1 domain containing 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.91 E-value=7e-10 Score=86.20 Aligned_cols=56 Identities=29% Similarity=0.574 Sum_probs=50.1
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
....++|+|+|.+..+. +|+|++||++.|++..+.+||.++. ++..|+||++|++.
T Consensus 6 ~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv~~ 61 (78)
T 2yuo_A 6 SGRRAKALLDFERHDDD-------ELGFRKNDIITIISQKDEHCWVGEL---NGLRGWFPAKFVEV 61 (78)
T ss_dssp CCEEEEESSCBCCSSTT-------BCCBCTTCEEEEEECCSSSEEEEEE---TTEEEEEEGGGEEE
T ss_pred CceEEEECccCCCCCCC-------CccCCCCCEEEEEEecCCCEEEEEE---CCCEEEEehHHEEE
Confidence 34678999999998877 9999999999999999999999986 47799999999974
No 255
>2gqi_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator, P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.91 E-value=2.7e-10 Score=86.93 Aligned_cols=57 Identities=21% Similarity=0.433 Sum_probs=49.4
Q ss_pred cccccccccCCC-CCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 97 VCYMRCLFTYDP-KEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 97 ~~~vRal~dy~p-~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
...++|+|+|.+ ..++ +|+|++||++.|++..+++||.++... ++..|+||++|++.
T Consensus 7 ~~~~~Alydy~~~~~~~-------eLsf~~Gd~i~v~~~~~~~W~~g~~~~-~g~~G~~P~~yv~~ 64 (71)
T 2gqi_A 7 GRRVRAILPYTKVPDTD-------EISFLKGDMFIVHNELEDGWMWVTNLR-TDEQGLIVEDLVEE 64 (71)
T ss_dssp CCCEEESSCCCCCTTSS-------CCCCCTTCBCCCCEECSSSCEEEECTT-TCCEEEECTTSEEE
T ss_pred CCEEEECcccCCCCCCC-------CCCCCCCCEEEEEEecCCCEEEEEECC-CCCEEEeeHHHEEE
Confidence 457899999999 7766 999999999999999999999998532 47899999999864
No 256
>1s96_A Guanylate kinase, GMP kinase; E.coli, dimer, SAD, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.1 PDB: 2an9_A* 2anb_A* 2anc_A 2f3r_A* 2f3t_A*
Probab=98.91 E-value=1.1e-08 Score=95.23 Aligned_cols=101 Identities=29% Similarity=0.387 Sum_probs=80.3
Q ss_pred HhcCCe-EEeecCcchhhhhhhhhccccccccCCC-ceEEecCCCccceeecCCCcccchhhccCccccccCHHHHHHHH
Q psy4417 258 ILSGKI-CVLDCSPVGLFTFLLGLIEGTVTAKLIP-YTYSIPICSWSSFFASDTTRPMRELEENGQNYWFTSREVMERDI 335 (440)
Q Consensus 258 ~~~g~~-~il~~~~~g~~~l~~~l~~~~~~~~~~p-~~i~i~~~~~~~f~~~~ttr~~~~~e~~g~~y~f~s~~~f~~~~ 335 (440)
+..|.+ +|+..+.+|..+|++.|... +.| ... +.+++|||+++.++.+|.+|+|++.+.|..++
T Consensus 13 ~~~G~ii~l~GpsGsGKSTLlk~L~g~-----~~p~~~~---------g~v~~ttr~~~~~e~~gi~y~fq~~~~f~~~~ 78 (219)
T 1s96_A 13 MAQGTLYIVSAPSGAGKSSLIQALLKT-----QPLYDTQ---------VSVSHTTRQPRPGEVHGEHYFFVNHDEFKEMI 78 (219)
T ss_dssp --CCCEEEEECCTTSCHHHHHHHHHHH-----SCTTTEE---------ECCCEECSCCCTTCCBTTTBEECCHHHHHHHH
T ss_pred CCCCcEEEEECCCCCCHHHHHHHHhcc-----CCCCceE---------EEEEecCCCCCcccccCceEEECCHHHHHHHH
Confidence 456664 45555555667777666532 222 233 55688999999999999999999999999999
Q ss_pred HcCceeeEEEEcCccccccHHHHHHHHhcCCeeEecC
Q psy4417 336 QDHKFLEYGEHNGHLYGTHLDSIREVILSGKICVLDC 372 (440)
Q Consensus 336 ~~~~fle~~~~~~~~yGt~~~~i~~~~~~~~~~i~~~ 372 (440)
..++|+||.++.+++|||+.+.|+++++.|+.+++|+
T Consensus 79 ~~~~f~E~~~~~~~~yg~~~~~v~~~l~~G~illLDL 115 (219)
T 1s96_A 79 SRDAFLEHAEVFGNYYGTSREAIEQVLATGVDVFLDI 115 (219)
T ss_dssp HTTCEEEEEEETTEEEEEEHHHHHHHHTTTCEEEEEC
T ss_pred hcCHHHHHHHHHhccCCCCHHHHHHHHhcCCeEEEEE
Confidence 9999999999999999999999999999999999884
No 257
>3cqt_A P59-FYN, proto-oncogene tyrosine-protein kinase FYN; beta barrel, ATP-binding, developmental protein, lipoprotein, manganese, metal-binding; 1.60A {Gallus gallus} PDB: 2l2p_A
Probab=98.91 E-value=8.4e-10 Score=86.09 Aligned_cols=56 Identities=32% Similarity=0.774 Sum_probs=49.9
Q ss_pred ccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 98 CYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 98 ~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
.+++|+|+|.+..++ +|+|++||++.|+++.+.+||.++... ++..|+||+++++.
T Consensus 6 ~~~~Alydy~~~~~~-------eLs~~~Gd~i~vl~~~~~~Ww~g~~~~-~g~~G~~P~~yv~~ 61 (79)
T 3cqt_A 6 TLFEALYDYEARTED-------DLSFHKGEKFQILNSSEGDWWEARSLT-TGETGYIPSIYLAP 61 (79)
T ss_dssp CCEEESSCBCCCSTT-------BCCBCTTCEEEEEECTTSSEEEEEETT-TCCEEEEEGGGEEE
T ss_pred cEEEECccCCCCCcC-------cCCCCCCCEEEEEEecCCCeEEEEECC-CCCEEEeehHHeEE
Confidence 468999999998877 999999999999999999999999853 47899999999864
No 258
>2m0y_A Dedicator of cytokinesis protein 1; apoptosis; NMR {Mus musculus}
Probab=98.91 E-value=8.7e-10 Score=84.65 Aligned_cols=58 Identities=19% Similarity=0.460 Sum_probs=50.6
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
...+++|+|||.+..++ +|+|++||++.|++.. ++||.++....++..|+||+++++.
T Consensus 10 ~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~-~~W~~g~~~~~~g~~G~~P~~yv~~ 67 (74)
T 2m0y_A 10 EEKYGVAFYNYDARGAD-------ELSLQIGDTVHILETY-EGWYRGYTLRKKSKKGIFPASYIHL 67 (74)
T ss_dssp CCSCEEECSEECCCSSS-------BCCEETTEEEEEEEBS-SSCEEEEESSCSSCCEEECGGGEEE
T ss_pred CCeEEEEceeeCCCCcC-------cccCCCCCEEEEEEcC-CCeEEEEECCCCCCEEEEehHHEEE
Confidence 35688999999998877 9999999999999985 7899999875557899999999864
No 259
>1ujy_A RHO guanine nucleotide exchange factor 6; structural genomics, SH3 domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=98.91 E-value=6.2e-10 Score=86.07 Aligned_cols=57 Identities=23% Similarity=0.572 Sum_probs=50.8
Q ss_pred CccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 95 KPVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 95 ~~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
....+++|+|||.+..++ +|+|++||++.|++..+.+||.++. ++..|+||+++++.
T Consensus 8 ~~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv~~ 64 (76)
T 1ujy_A 8 SHQLIVKARFNFKQTNED-------ELSVCKGDIIYVTRVEEGGWWEGTL---NGRTGWFPSNYVRE 64 (76)
T ss_dssp CCCEEEECCSCBCCSSTT-------SCCBCSSCCEEESSCCSSSCEEEEE---TTEEEEECTTTSEE
T ss_pred CCCEEEEECccCCcCCCC-------cccCCCCCEEEEEEecCCCEEEEEE---CCCEEEechHHEEE
Confidence 355789999999998777 9999999999999998999999997 57899999999865
No 260
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=98.91 E-value=7.1e-09 Score=87.47 Aligned_cols=80 Identities=21% Similarity=0.362 Sum_probs=67.2
Q ss_pred CCeEEEEeeCCCCccEEEEecCC-----CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhc--C
Q psy4417 6 HPLKKILGTGLSPCGLTVEQDAN-----GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKS--D 76 (440)
Q Consensus 6 ~~r~v~l~r~g~~lGiti~~~~~-----~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~--~ 76 (440)
+...+.+.+...+|||++.++.. .+++|..|.++|||+++|.|+.||+|++|||.++ .+++++..+|+.. +
T Consensus 30 ~~~~v~l~~~~~~lG~~l~~~~~~~~g~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~g 109 (121)
T 2kom_A 30 KRLNIQLKKGTEGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLVGKSQEEVVSLLRSTKME 109 (121)
T ss_dssp EEEEEEEECCTTCCCEEEECCCCSSSSSCCEEEEEECTTSHHHHHTCCCSSSEEEEETTEECTTSCHHHHHHHHHHCCSS
T ss_pred eEEEEEEEcCCCcEeEEEEeccCCcCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCC
Confidence 34456666777899999997643 4599999999999999999999999999999999 4589999999875 6
Q ss_pred Cceeeeecc
Q psy4417 77 GNIQFTIAP 85 (440)
Q Consensus 77 ~~v~l~v~p 85 (440)
..+.|+|..
T Consensus 110 ~~v~l~v~R 118 (121)
T 2kom_A 110 GTVSLLVFR 118 (121)
T ss_dssp CEEEEEEEE
T ss_pred CEEEEEEEe
Confidence 788888754
No 261
>1wxt_A Hypothetical protein FLJ21522; SH3 domain, EPS8-related protein 3, protein-protein interaction, structural genomics; NMR {Homo sapiens}
Probab=98.90 E-value=8.2e-10 Score=83.47 Aligned_cols=56 Identities=25% Similarity=0.583 Sum_probs=48.8
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
...+++|+|+|.+..+. +|+|++||++.|++. +.+||.++.. ++..|+||+++++.
T Consensus 6 ~~~~~~alydy~~~~~~-------eLs~~~Gd~i~v~~~-~~~Ww~~~~~--~g~~G~~P~~yv~~ 61 (68)
T 1wxt_A 6 SGLKMQVLYEFEARNPR-------ELTVVQGEKLEVLDH-SKRWWLVKNE--AGRSGYIPSNILEP 61 (68)
T ss_dssp CCEEEEESSCBCCCSSS-------BCCBCTTCEEEEEEC-SSSEEEEECT--TSCEEEEEGGGEEC
T ss_pred CCeEEEECceECCCCcC-------cCCCCCCCEEEEEEc-CCCEEEEEEC--CCCEEEEEhHHcEE
Confidence 45678999999998877 999999999999998 4899999963 57899999999864
No 262
>1x69_A Cortactin isoform A; SH3 domain, CTTN, oncogene EMS1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.90 E-value=9.6e-10 Score=85.66 Aligned_cols=57 Identities=25% Similarity=0.526 Sum_probs=50.6
Q ss_pred CccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 95 KPVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 95 ~~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
....+++|+|+|.+..++ +|+|++||++.|++..+.+||.++. ++..|+||+++++.
T Consensus 15 ~~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv~~ 71 (79)
T 1x69_A 15 DLGITAVALYDYQAAGDD-------EISFDPDDIITNIEMIDDGWWRGVC---KGRYGLFPANYVEL 71 (79)
T ss_dssp CCCCCEEESSCCCCSSSS-------BCCCCTTCEEEEEEECSSSEEEEEE---TTEEEEEETTSEEE
T ss_pred CCCeEEEECccCCCCCCC-------CcCcCCCCEEEEeEecCCCeEEEEE---CCcEEEechHHEEE
Confidence 355789999999998877 9999999999999998999999996 47899999999864
No 263
>1neg_A Spectrin alpha chain, brain; SH3-domain fold, five antiparallel beta sheets, structural protein; 2.30A {Gallus gallus} SCOP: b.34.2.1
Probab=98.90 E-value=7.1e-10 Score=87.33 Aligned_cols=57 Identities=25% Similarity=0.609 Sum_probs=49.9
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHHh
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEER 162 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~r 162 (440)
...+++|+|||.+..++ +|+|++||++.|++..+++||.++. ++..|+||++|+...
T Consensus 16 ~~~~~~Alydy~a~~~~-------eLsf~~Gd~i~Vl~~~~~gWw~g~~---~g~~G~~P~~yv~~~ 72 (83)
T 1neg_A 16 GKELVLALYDYQEKSPR-------EVTMKKGDILTLLNSTNKDWWKVEV---NDRQGFVPAAYVKKL 72 (83)
T ss_dssp -CCEEEESSCBCCSSTT-------BCCBCTTCEEEEEECCSSSEEEEEE---TTEEEEEEGGGEEEC
T ss_pred CceEEEEccccCCCCCC-------ccccCCCCEEEEEEecCCCEEEEEE---CCeEEEEEHHHEEEC
Confidence 45678999999998877 9999999999999998999999965 578999999998653
No 264
>3eg3_A Proto-oncogene tyrosine-protein kinase ABL1; beta, ATP-binding, cell adhesion, cytoskeleton, LIPO magnesium, manganese, metal-binding, myristate; 1.40A {Homo sapiens} PDB: 3egu_A 3eg0_A 3eg2_A 3eg1_A 1abo_A 1abq_A 1ju5_C* 2o88_A 1bbz_A 1awo_A
Probab=98.90 E-value=7.7e-10 Score=82.10 Aligned_cols=55 Identities=24% Similarity=0.468 Sum_probs=47.5
Q ss_pred cccccccccCCCCCCCCCCCccccceeccCCEEEEee-cCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 97 VCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILN-QKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 97 ~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~-~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
...++|+|||.+..+. +|+|++||++.|++ ..+++||.++. ++..|+||++++++
T Consensus 5 ~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~~W~~~~~---~g~~G~~P~~yv~~ 60 (63)
T 3eg3_A 5 PNLFVALYDFVASGDN-------TLSITKGEKLRVLGYNHNGEWCEAQT---KNGQGWVPSAYITP 60 (63)
T ss_dssp TTEEEESSCBCCCSSS-------BCCBCTTCEEEEEEECTTSSEEEEEE---TTEEEEEEGGGEEE
T ss_pred CEEEEEcceECCCCCC-------ccCCCCCCEEEEEEeCCCCCeEEEEE---CCCeEEEehHHeEE
Confidence 4578999999998877 99999999999999 55778999998 46789999999754
No 265
>1zuy_A Myosin-5 isoform; SH3 domain, contractIle protein; 1.39A {Saccharomyces cerevisiae} PDB: 1yp5_A
Probab=98.90 E-value=8.5e-10 Score=80.49 Aligned_cols=54 Identities=19% Similarity=0.481 Sum_probs=46.7
Q ss_pred cccccccC-CCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHH
Q psy4417 99 YMRCLFTY-DPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELE 160 (440)
Q Consensus 99 ~vRal~dy-~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~ 160 (440)
.++|++|| .+..++ +|+|++||++.|++..+.+||.++... ++..|+||+++++
T Consensus 2 ~~~al~d~~~~~~~~-------eLs~~~Gd~i~v~~~~~~gW~~g~~~~-~g~~G~~P~~yv~ 56 (58)
T 1zuy_A 2 MFEAAYDFPGSGSPS-------ELPLKKGDVIYITREEPSGWSLGKLLD-GSKEGWVPTAYMK 56 (58)
T ss_dssp EEEESSCBCCCSCTT-------BCCBCTTCEEEEEEECTTSEEEEEESS-CSCEEEEEGGGEE
T ss_pred EEEEecccCCCCCCC-------cCCCCCCCEEEEEEecCCCeEEEEECC-CCCEEEecHHHEE
Confidence 36899999 776666 999999999999999899999999853 3789999999875
No 266
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=98.90 E-value=8.9e-09 Score=87.46 Aligned_cols=81 Identities=19% Similarity=0.236 Sum_probs=69.3
Q ss_pred CCCCeEEEEeeCCCCccEEEEecCC-CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccCCC--HHHHHHHHHhcCC-ce
Q psy4417 4 PPHPLKKILGTGLSPCGLTVEQDAN-GNLIIARILAGSLIDKQGVLKVGDVILGVNGENVSS--PEDLQIEVVKSDG-NI 79 (440)
Q Consensus 4 ~~~~r~v~l~r~g~~lGiti~~~~~-~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v~t--~~e~~~~L~~~~~-~v 79 (440)
...++.+++.+...++||++.++.. .+++|..|.++|||+++| |+.||.|++|||.++.+ ++++..+|+...+ .+
T Consensus 7 ~~~~r~v~l~~~~~g~G~~l~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~ 85 (128)
T 2kjd_A 7 MLRPRLCTMKKGPSGYGFNLHSDKSKPGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETK 85 (128)
T ss_dssp TCCCEEEEEECCSSSCCEEEEECSSSCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTTCSEEE
T ss_pred CCCcEEEEEecCCCcccEEEEecCCCCCEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCEE
Confidence 4678889999999999999998654 579999999999999999 99999999999999955 9999999987644 45
Q ss_pred eeeecc
Q psy4417 80 QFTIAP 85 (440)
Q Consensus 80 ~l~v~p 85 (440)
.+.+..
T Consensus 86 ~l~v~R 91 (128)
T 2kjd_A 86 LLVVDR 91 (128)
T ss_dssp EEEECH
T ss_pred EEEEEe
Confidence 576654
No 267
>2lcs_A NAP1-binding protein 2; adaptor, transferase, signaling protein; NMR {Saccharomyces cerevisiae}
Probab=98.90 E-value=5.7e-10 Score=85.67 Aligned_cols=57 Identities=25% Similarity=0.429 Sum_probs=50.0
Q ss_pred ccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHHh
Q psy4417 98 CYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEER 162 (440)
Q Consensus 98 ~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~r 162 (440)
..++|+|||.+..++ +|+|++||++.|+++.+.+||.++..+ ++..|+||+++++..
T Consensus 6 ~~~~Alydy~a~~~~-------eLs~~~Gd~i~v~~~~~~gWw~g~~~~-~g~~G~~P~~yv~~~ 62 (73)
T 2lcs_A 6 QRAVALYDFEPENDN-------ELRLAEGDIVFISYKHGQGWLVAENES-GSKTGLVPEEFVSYI 62 (73)
T ss_dssp EEEEESSCBCCSSTT-------BCCBCTTCEEEEEEEETTTEEEEECTT-SSCEEEEESTTEEEC
T ss_pred CEEEECccCCCCCCC-------ccCCcCCCEEEEEEEcCCCEEEEEECC-CCCEEEeeHHHEEEC
Confidence 468999999998877 999999999999999999999998753 368999999998653
No 268
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=98.89 E-value=7.6e-09 Score=86.20 Aligned_cols=82 Identities=23% Similarity=0.261 Sum_probs=69.9
Q ss_pred CCCCeEEEEeeC-CCCccEEEEecCC-CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcCCce
Q psy4417 4 PPHPLKKILGTG-LSPCGLTVEQDAN-GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSDGNI 79 (440)
Q Consensus 4 ~~~~r~v~l~r~-g~~lGiti~~~~~-~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~~~v 79 (440)
..+|+.+.+.+. ...+||.+..... .+++|..|.++|||+++| |+.||.|++|||.++ .++.++..+++..++.+
T Consensus 11 ~ldp~~~~l~~~~~~~~G~~l~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v 89 (114)
T 2edz_A 11 TFNPRECKLSKQEGQNYGFFLRIEKDTDGHLIRVIEEGSPAEKAG-LLDGDRVLRINGVFVDKEEHAQVVELVRKSGNSV 89 (114)
T ss_dssp CCCCEEEEEECCTTCCCSCEEECCTTCCSCEEECCCTTCTTGGGT-CCTTCEEEEESSSBCSSSCHHHHHHHHHHTCSEE
T ss_pred cCCCEEEEEeCCCCCcccEEEEEecCCCCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEE
Confidence 347788888875 6789999986533 569999999999999999 999999999999999 45799999998888899
Q ss_pred eeeeccC
Q psy4417 80 QFTIAPQ 86 (440)
Q Consensus 80 ~l~v~p~ 86 (440)
.|.|...
T Consensus 90 ~l~v~R~ 96 (114)
T 2edz_A 90 TLLVLDG 96 (114)
T ss_dssp EEEEECH
T ss_pred EEEEEEC
Confidence 9988653
No 269
>2csq_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.89 E-value=6.2e-10 Score=90.36 Aligned_cols=63 Identities=27% Similarity=0.541 Sum_probs=51.1
Q ss_pred ccccccccccCCCCCCCCCCC-ccccceeccCCEEEEeec-CCCCceEEEecCCCCCCccccchhHHH
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPC-KEIGLAFNHGDILQILNQ-KDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~-~e~~L~f~~GdIl~V~~~-~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
...+++|+|||.+..++..++ .+.+|+|++||+|+|+++ .+.+||+++. ++..|+||++|++.
T Consensus 16 ~~~~~~Alydy~~~~~~~~~~~~~~eLsf~~Gd~i~vl~~~~~~gWw~g~~---~g~~G~~P~~yv~~ 80 (97)
T 2csq_A 16 PARIFVALFDYDPLTMSPNPDAAEEELPFKEGQIIKVYGDKDADGFYRGET---CARLGLIPCNMVSE 80 (97)
T ss_dssp CCEEEECSSCBCTTTTSSCHHHHTTBCCBCTTCEEEEEEEECTTCEEEEEE---TTEEEEEETTTSEE
T ss_pred CceEEEEccccCCCcccccCCCCCCccCCCCCCEEEEEEecCCCCeEEEEE---CCcEEEEehHHeEE
Confidence 456789999999985444443 455999999999999975 5567999998 47899999999975
No 270
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.89 E-value=1.2e-09 Score=90.79 Aligned_cols=80 Identities=13% Similarity=0.172 Sum_probs=68.7
Q ss_pred CCCeEEEEeeCCCCccEEEEecCCCcEEEEEEcCCChhhhcCCCCCCCEEEeECCccCC--CHHHHHHHHHhcCC-ceee
Q psy4417 5 PHPLKKILGTGLSPCGLTVEQDANGNLIIARILAGSLIDKQGVLKVGDVILGVNGENVS--SPEDLQIEVVKSDG-NIQF 81 (440)
Q Consensus 5 ~~~r~v~l~r~g~~lGiti~~~~~~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v~--t~~e~~~~L~~~~~-~v~l 81 (440)
..+|.|.+.|++.++||++.++ ..++|..|.+++||+++| |+.||.|++|||.++. +++++..+|+..++ .+.|
T Consensus 14 ~~~r~v~l~~~~~~~G~~l~~~--~~v~V~~V~~~spA~~aG-L~~GD~Il~InG~~v~~~~~~d~~~~i~~~~~~~v~l 90 (111)
T 1vae_A 14 SPPRGIHFTVEEGDLGFTLRGN--TPVQVHFLDPHCSASLAG-AKEGDYIVSIQGVDCKWLTVSEVMKLLKSFGGEEVEM 90 (111)
T ss_dssp CCCCCCCEECCSSCCSCCEESS--SSCEECCCCTTSSHHHHH-CCTTCEEEEETTEECSSCCHHHHHHHHHHTTTSEECE
T ss_pred CCCeEEEEEcCCCcccEEEeCC--CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCceEEE
Confidence 3567788999999999999753 468899999999999999 9999999999999995 99999999987655 5888
Q ss_pred eeccCC
Q psy4417 82 TIAPQG 87 (440)
Q Consensus 82 ~v~p~~ 87 (440)
+|.+..
T Consensus 91 ~V~~~~ 96 (111)
T 1vae_A 91 KVVSLL 96 (111)
T ss_dssp EEECEE
T ss_pred EEEecC
Confidence 887543
No 271
>2jw4_A Cytoplasmic protein NCK1; SH3 domain, phosphorylation, SH2 domain, signaling protein; NMR {Homo sapiens}
Probab=98.89 E-value=1e-09 Score=83.89 Aligned_cols=55 Identities=22% Similarity=0.499 Sum_probs=48.5
Q ss_pred cccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 97 VCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 97 ~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
..+++|+|+|.+..+. +|+|++||++.|++. +++||.++.. ++..|+||++|++.
T Consensus 7 ~~~~~alydy~~~~~~-------eLs~~~Gd~i~v~~~-~~~Ww~g~~~--~g~~G~~P~~yv~~ 61 (72)
T 2jw4_A 7 EVVVVAKFDYVAQQEQ-------ELDIKKNERLWLLDD-SKSWWRVRNS--MNKTGFVPSNYVER 61 (72)
T ss_dssp CEEEECSSCCCCSSTT-------SCCCCTTCEEEEEEC-SSSSEEEECT--TSCEEEECTTSCEE
T ss_pred CeEEEECcCCCcCCCC-------cccCCCCCEEEEEEC-CCCEEEEEEC--CCCEEEEEhhHEEE
Confidence 4578999999998877 999999999999997 6699999865 47899999999865
No 272
>2fpf_A C-JUN-amino-terminal kinase interacting protein 1; scaffold protein 1, islet-brain-1, IB-1, mitogen-activated P kinase 8-interacting protein 1; 3.00A {Rattus norvegicus}
Probab=98.89 E-value=7.9e-10 Score=84.28 Aligned_cols=57 Identities=25% Similarity=0.429 Sum_probs=49.9
Q ss_pred cccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 97 VCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 97 ~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
..+++|+|+|.+..++ +|+|++||++.|++..+.+||.++... ++..|+||++++++
T Consensus 6 ~~~~~al~~y~~~~~~-------eLs~~~Gd~i~v~~~~~~gW~~g~~~~-~g~~G~fP~~yv~~ 62 (71)
T 2fpf_A 6 EQTHRAIFRFVPRHED-------ELELEVDDPLLVELQAEDYWYEAYNMR-TGARGVFPAYYAIE 62 (71)
T ss_dssp CCCEEECSCBCCSSTT-------BCCBCTTCEEEEEEECTTSEEEEEETT-TTEEEEEEGGGEEE
T ss_pred CeEEEECeeECccCCC-------cccCcCCcEEEEeEecCCCEEEEEECC-CCCEEEeehHHEEE
Confidence 3468999999998877 999999999999999999999999643 47899999999864
No 273
>1gbq_A GRB2; complex (signal transduction/peptide), SH3 domain; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 1gbr_A 2gbq_A 3gbq_A 4gbq_A
Probab=98.89 E-value=5.9e-10 Score=85.78 Aligned_cols=56 Identities=32% Similarity=0.680 Sum_probs=48.2
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeecC-CCCceEEEecCCCCCCccccchhHHH
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQK-DPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~-d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
..+.++|+|||.+..+. +|+|++||++.|++.. +.+||.++. ++..|+||+++++.
T Consensus 8 ~~~~~~alydy~~~~~~-------eLs~~~Gd~i~v~~~~~~~~Ww~g~~---~g~~G~~P~~yv~~ 64 (74)
T 1gbq_A 8 GSMEAIAKYDFKATADD-------ELSFKRGDILKVLNEECDQNWYKAEL---NGKDGFIPKNYIEM 64 (74)
T ss_dssp --CEEEESSCBCCSSTT-------BCCBCTTCEEECCBCSSCSSEEEEEE---TTEEEEEEGGGEEE
T ss_pred CCeEEEECccCCCCCCC-------eeeEcCCCEEEEeEecCCCCEEEEEE---CCCEEEEehHhEEE
Confidence 44678999999998877 9999999999999977 678999997 57899999999863
No 274
>2dil_A Proline-serine-threonine phosphatase-interacting protein 1; SH3 domain, PEST phosphatase-interacting protein 1, CD2- binding protein 1; NMR {Homo sapiens}
Probab=98.89 E-value=1e-09 Score=83.11 Aligned_cols=55 Identities=29% Similarity=0.672 Sum_probs=49.2
Q ss_pred cccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 97 VCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 97 ~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
...++|+|+|.+..++ +|+|++||++.|++..+.+||.++. ++..|+||++++..
T Consensus 8 ~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv~~ 62 (69)
T 2dil_A 8 AQEYRALYDYTAQNPD-------ELDLSAGDILEVILEGEDGWWTVER---NGQRGFVPGSYLEK 62 (69)
T ss_dssp CCEEECCSCBCCSSSS-------SCCBCTTCEEEEEECCSSSEEEEEE---TTEEEEEEGGGCCB
T ss_pred CcEEEECccCCccCcC-------ccCCCCCCEEEEEECCCCCEEEEEE---CCCEEEEehHHeEE
Confidence 4568999999998877 9999999999999999999999998 37899999999854
No 275
>2jt4_A Cytoskeleton assembly control protein SLA1; endocytosis, SH3, actin-binding, cytoplasm, cytoskeleton, phosphorylation, SH3 domain, DNA damage, DNA repair, nucleus; NMR {Saccharomyces cerevisiae}
Probab=98.89 E-value=1.3e-09 Score=82.88 Aligned_cols=57 Identities=30% Similarity=0.594 Sum_probs=50.0
Q ss_pred cccccccccCCCCCCCCCCCccccceeccCCEEEEeecC-CCCceEEEecCCCCCCccccchhHHH
Q psy4417 97 VCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQK-DPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 97 ~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~-d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
..+++|+|||.+..++ +|+|++||++.|++.. +.+||.++... ++..|+||++++..
T Consensus 6 ~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~~Ww~g~~~~-~g~~G~~P~~yv~~ 63 (71)
T 2jt4_A 6 KKRGIVQYDFMAESQD-------ELTIKSGDKVYILDDKKSKDWWMCQLVD-SGKSGLVPAQFIEP 63 (71)
T ss_dssp CEEEEECSCBCCSSTT-------BCCBCTTCEEEEEESSSCSSEEEEEETT-TCCEEEEEGGGEEE
T ss_pred CCEEEEcccCCCCCCC-------cccCCCCCEEEEEECCCCCCCEEEEECC-CCCeEEechHHeEE
Confidence 4678999999998877 9999999999999986 89999999853 36899999999864
No 276
>2da9_A SH3-domain kinase binding protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.89 E-value=9.6e-10 Score=83.53 Aligned_cols=56 Identities=29% Similarity=0.738 Sum_probs=49.1
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeecC--CCCceEEEecCCCCCCccccchhHHH
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQK--DPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~--d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
...+++|+|+|.+..++ +|+|++||++.|++.. +.+||.++. ++..|+||+++++.
T Consensus 6 ~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~~~W~~g~~---~g~~G~~P~~yv~~ 63 (70)
T 2da9_A 6 SGDYCKVIFPYEAQNDD-------ELTIKEGDIVTLINKDCIDVGWWEGEL---NGRRGVFPDNFVKL 63 (70)
T ss_dssp SSEEEEECSCCCCSSTT-------BCCCCTTEEEEEEECCCSSTTEEEEEC---SSCEEEEEGGGEEE
T ss_pred CCcEEEECcCCCCCCcC-------EeeEcCCCEEEEEECCCCCCCeEEEEE---CCcEEEechHHeEE
Confidence 34678999999998877 9999999999999975 899999986 57899999999854
No 277
>2jxb_A T-cell surface glycoprotein CD3 epsilon chain, cytoplasmic protein NCK2; T-cell receptor, SH3 domain, immunology, SH2 domain; NMR {Homo sapiens}
Probab=98.89 E-value=1.1e-09 Score=86.72 Aligned_cols=55 Identities=22% Similarity=0.505 Sum_probs=48.2
Q ss_pred cccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 97 VCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 97 ~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
..+++|+|||.+..++ +|+|++||++.|++. +++||.++.. ++..|+||++|+++
T Consensus 31 ~~~~~alydy~~~~~~-------eLs~~~Gd~i~v~~~-~~~Ww~g~~~--~g~~G~~P~~yv~~ 85 (86)
T 2jxb_A 31 EVIVIAKWDYTAQQDQ-------ELDIKKNERLWLLDD-SKTWWRVRNA--ANRTGYVPSNYVER 85 (86)
T ss_dssp CEEEEESSCCCCCSSS-------BCCCCTTEEEEEEEC-CSSEEEEECT--TSCEEEEEGGGBCC
T ss_pred ceEEEECccCCCCCCC-------EeccCCCCEEEEEec-CCCeEEEEEC--CCCEEEeehHHEEe
Confidence 3578999999998877 999999999999997 6799999864 47899999999864
No 278
>1uhf_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, signaling protein; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=98.89 E-value=8.4e-10 Score=83.71 Aligned_cols=55 Identities=22% Similarity=0.508 Sum_probs=47.9
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
....++|+|+|.+..+. +|+|++||++.|++. +.+||.++. ++..|+||+++++.
T Consensus 7 ~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~-~~~Ww~g~~---~g~~G~~P~~yv~~ 61 (69)
T 1uhf_A 7 GGEEYIALYPYSSVEPG-------DLTFTEGEEILVTQK-DGEWWTGSI---GDRSGIFPSNYVKP 61 (69)
T ss_dssp CSEEEECSSCBCCSSSS-------BCCBCTTCEEEECEE-ETTEEEECS---TTCCEEECGGGCEE
T ss_pred CCCEEEEeeeECCCCcC-------ccCCCCCCEEEEEEe-CCCEEEEEe---CCcEEEEchHHeEE
Confidence 34568999999998877 999999999999998 789999975 47899999999864
No 279
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.89 E-value=4e-09 Score=89.65 Aligned_cols=81 Identities=21% Similarity=0.263 Sum_probs=70.3
Q ss_pred CCCeEEEEeeCCCCccEEEEecCCCcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHh--cCCcee
Q psy4417 5 PHPLKKILGTGLSPCGLTVEQDANGNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVK--SDGNIQ 80 (440)
Q Consensus 5 ~~~r~v~l~r~g~~lGiti~~~~~~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~--~~~~v~ 80 (440)
.....+.+.+...+|||++.+. +..++|..|.++|||+++|.|+.||.|++|||.++ .+++++..+|+. .+..+.
T Consensus 26 ~~~~~~~l~k~~~glG~~i~~~-~~~v~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~s~~d~~~~l~~~~~G~~v~ 104 (126)
T 1wif_A 26 NKVIQTKLTVGNLGLGLVVIQN-GPYLQISHLINKGAAASDGILQPGDVLISVGHANVLGYTLREFLKLLQNITIGTVLQ 104 (126)
T ss_dssp CCEEEEEEECCTTCCCCCEEEE-TTEEEECCCCTTSSGGGCSSSCTTCBEEEESSSCCTTCCHHHHHHHHTSCCSSCEEE
T ss_pred CceEEEEEecCCceEeEEEEcC-CCcEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCEEE
Confidence 3455677888889999999873 45699999999999999999999999999999999 589999999996 467889
Q ss_pred eeeccC
Q psy4417 81 FTIAPQ 86 (440)
Q Consensus 81 l~v~p~ 86 (440)
|+|...
T Consensus 105 l~V~R~ 110 (126)
T 1wif_A 105 IKAYRG 110 (126)
T ss_dssp EEEESS
T ss_pred EEEEEC
Confidence 998765
No 280
>2dm1_A Protein VAV-2; RHO family guanine nucleotide exchange factor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.88 E-value=6.3e-10 Score=85.36 Aligned_cols=56 Identities=23% Similarity=0.579 Sum_probs=49.2
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeecC--CCCceEEEecCCCCCCccccchhHHH
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQK--DPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~--d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
...+++|+|+|.+..++ +|+|++||++.|++.. +.+||.++. ++..|+||++|++.
T Consensus 6 ~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~~~Ww~g~~---~g~~G~~P~~yv~~ 63 (73)
T 2dm1_A 6 SGGTAVARYNFAARDMR-------ELSLREGDVVRIYSRIGGDQGWWKGET---NGRIGWFPSTYVEE 63 (73)
T ss_dssp SSSEEEESSCBCCCSTT-------BCCBCTTCEEECCBSSSSSSSCEEEEE---TTEEEEECSSSEEE
T ss_pred CCCEEEECccCCcCCCC-------cCCCCCCCEEEEEEecCCCCCeEEEEE---CCeEEEeehHHEEE
Confidence 44678999999998877 9999999999999976 569999997 57899999999875
No 281
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.88 E-value=1.8e-09 Score=87.23 Aligned_cols=80 Identities=18% Similarity=0.157 Sum_probs=69.4
Q ss_pred CCCCeEEEEeeCC--CCccEEEEecCCCcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcCCce
Q psy4417 4 PPHPLKKILGTGL--SPCGLTVEQDANGNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSDGNI 79 (440)
Q Consensus 4 ~~~~r~v~l~r~g--~~lGiti~~~~~~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~~~v 79 (440)
.+.++.|.+.|+. .++||.+.+ ..+++|..|.++|||+ +| |+.||+|++|||.++ .++.++..+++..++.+
T Consensus 6 ~~~~~~v~l~~~~~~~~~G~~l~~--~~~~~V~~V~~~spA~-ag-L~~GD~Il~ing~~v~~~~~~~~~~~~~~~g~~v 81 (96)
T 2edv_A 6 SGVRHTVKIDKDTLLQDYGFHISE--SLPLTVVAVTAGGSAH-GK-LFPGDQILQMNNEPAEDLSWERAVDILREAEDSL 81 (96)
T ss_dssp SCEEEEEEECCCSSSCSCSBCCCS--SSSCBCCCBCSSSSST-TT-SCTTCBEEEESSCBSTTCCHHHHHHHHHHCSSCE
T ss_pred CCccEEEEEEECCCCCcccEEEec--CCCeEEEEECCCCchh-hC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 4567788998877 589999976 4579999999999996 77 999999999999999 56899999999889999
Q ss_pred eeeeccCC
Q psy4417 80 QFTIAPQG 87 (440)
Q Consensus 80 ~l~v~p~~ 87 (440)
.|+|....
T Consensus 82 ~l~v~R~~ 89 (96)
T 2edv_A 82 SITVVRCT 89 (96)
T ss_dssp EEEEEECC
T ss_pred EEEEEECC
Confidence 99998765
No 282
>2rf0_A Mitogen-activated protein kinase kinase kinase 10; MAP3K10, MLK2, SH3 domain, TKL kinase, MKN28, structural GEN structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=98.88 E-value=1.1e-09 Score=87.47 Aligned_cols=56 Identities=32% Similarity=0.662 Sum_probs=49.3
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeecC-----CCCceEEEecCCCCCCccccchhHH
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQK-----DPNWWQAQLIEPTGPMGLVPSQELE 160 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~-----d~~ww~a~~~~~~~~~G~iPs~~~~ 160 (440)
...+++|+|||.+..++ +|+|++||++.|++.. +.+||.++.. ++..|+||++|++
T Consensus 28 ~~~~~~Alydy~a~~~~-------ELsf~~GD~I~Vl~~~~~~~~~~gWw~g~~~--~g~~G~fP~nyV~ 88 (89)
T 2rf0_A 28 AGPVWTAVFDYEAAGDE-------ELTLRRGDRVQVLSQDCAVSGDEGWWTGQLP--SGRVGVFPSNYVA 88 (89)
T ss_dssp CCCEEEECSCBCCSSTT-------BCCBCTTCEEEEEECCHHHHSSTTEEEEECT--TCCEEEEEGGGEE
T ss_pred CCcEEEECCccCCCCCC-------ccccCCCCEEEEEeccCCcccCCCEEEEEEC--CCCEEEEcHHHCc
Confidence 45678999999998877 9999999999999984 8999999975 3789999999864
No 283
>3thk_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.70A {Rattus norvegicus} SCOP: b.34.2.1
Probab=98.88 E-value=8.6e-10 Score=84.45 Aligned_cols=55 Identities=25% Similarity=0.654 Sum_probs=49.3
Q ss_pred cccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 97 VCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 97 ~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
...++|+|||.+..+. +|+|++||++.|++..+.+||.++. ++..|+||+++++.
T Consensus 5 ~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv~~ 59 (73)
T 3thk_A 5 KELVLALYDYQEKSPR-------EVTMKKGDILTLLNSTNKDWWKVEV---NDRQGFVPAAYVKK 59 (73)
T ss_dssp CCEEEECSCBCCCSTT-------BCCBCTTCEEEEEECCSSSEEEEEE---TTEEEEEEGGGEEE
T ss_pred CEEEEECcCCCcCCCC-------ccCCCCCCEEEEEECCCCCeEEEEE---CCcEEEEehHHeEE
Confidence 4578999999998777 9999999999999998999999986 46799999999875
No 284
>1x43_A Endophilin B1, SH3 domain GRB2-like protein B1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.88 E-value=1.2e-09 Score=85.49 Aligned_cols=56 Identities=21% Similarity=0.409 Sum_probs=49.2
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeec--CCCCceEEEecCCCCCCccccchhHHH
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQ--KDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~--~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
....++|+|||.+..++ +|+|++||++.|++. .+.+||.++. ++..|+||++|++.
T Consensus 16 ~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~~~Ww~g~~---~g~~G~~P~~yv~~ 73 (81)
T 1x43_A 16 NNRKARVLYDYDAANST-------ELSLLADEVITVFSVVGMDSDWLMGER---GNQKGKVPITYLEL 73 (81)
T ss_dssp CCEEEEESSCCCCSSTT-------BCCCCTTCEEEEECCTTCCTTEEEEEE---TTEEEEEEGGGEEE
T ss_pred CCeEEEEcccCCCCCCC-------cCCCCCCCEEEEEEcCCCCCCcEEEEE---CCCEEEEehHHEEE
Confidence 44678999999998887 999999999999997 4789999986 57899999999854
No 285
>2ecz_A Sorbin and SH3 domain-containing protein 1; glycoprotein, membrane, nuclear protein, phosphorylation, polymorphism, transport, structural genomics; NMR {Homo sapiens}
Probab=98.88 E-value=5.8e-10 Score=84.73 Aligned_cols=58 Identities=19% Similarity=0.436 Sum_probs=50.6
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
....++|+|+|.+..+. +|+|++||++.|++..+.+||.++..+ .+..|+||+++++.
T Consensus 6 ~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~~~-~g~~G~~P~~yv~~ 63 (70)
T 2ecz_A 6 SGGEAIAKFNFNGDTQV-------EMSFRKGERITLLRQVDENWYEGRIPG-TSRQGIFPITYVDV 63 (70)
T ss_dssp CCBCEEESSCCCCCSTT-------BCCCCTTCBCEEEEEEETTEEEEEETT-TTEEEEECTTTEEE
T ss_pred CCCEEEECccCCCCCcC-------CcCCCCCCEEEEEEecCCCeEEEEECC-CCCEEEEchHHEEE
Confidence 45678999999998877 999999999999998888999999864 35799999999864
No 286
>4f14_A Nebulette; SH3 domain, heart muscle, actin-binding protein-peptide COMP; 1.20A {Homo sapiens} PDB: 1ark_A 1neb_A 3i35_A
Probab=98.88 E-value=8.9e-10 Score=81.97 Aligned_cols=56 Identities=21% Similarity=0.562 Sum_probs=48.3
Q ss_pred cccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHH
Q psy4417 97 VCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELE 160 (440)
Q Consensus 97 ~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~ 160 (440)
...++|+|||.+..++ +|+|++||++.|+...+.+||.++... ++..|+||+++++
T Consensus 6 ~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~W~~g~~~~-~g~~G~~P~~yv~ 61 (64)
T 4f14_A 6 LRTYRAMYDYSAQDED-------EVSFRDGDYIVNVQPIDDGWMYGTVQR-TGRTGMLPANYIE 61 (64)
T ss_dssp --CEEESSCBCCCSTT-------BCCBCTTCEEEEEEECSSSEEEEEETT-TTEEEEEEGGGEE
T ss_pred CEEEEECeeeCCcCCC-------cCCCCCCCEEEEEEeCCCCeEEEEECC-CCCEEEEeHHHeE
Confidence 4568999999998877 999999999999999899999999853 4678999999875
No 287
>1u5s_A Cytoplasmic protein NCK2; protein-protein complex, beta barrel, beta sheet, zinc finger, metal binding protein; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2fry_A
Probab=98.88 E-value=9e-10 Score=83.92 Aligned_cols=56 Identities=23% Similarity=0.707 Sum_probs=49.2
Q ss_pred cccccccccCCCCCCCCCCCccccceeccCCEEEEeec--CCCCceEEEecCCCCCCccccchhHHH
Q psy4417 97 VCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQ--KDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 97 ~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~--~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
..+++|+|+|.+..++ +|+|++||++.|++. .+++||.++.. ++..|+||++++..
T Consensus 6 ~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~~~Ww~g~~~--~g~~G~~P~~yv~~ 63 (71)
T 1u5s_A 6 LHVVQTLYPFSSVTEE-------ELNFEKGETMEVIEKPENDPEWWKCKNA--RGQVGLVPKNYVVV 63 (71)
T ss_dssp SSEEEESSCCCCCSSS-------BCCCCSSCCEEEEECCCTTTCEEEEEET--TTEEEEEETTSEEE
T ss_pred cEEEEEcccCCCCCCC-------cccCCCCCEEEEEECCCCCCCCEEEEeC--CCCEEEEeHHHEEE
Confidence 4578999999998877 999999999999998 78999999854 47899999999864
No 288
>1wi7_A SH3-domain kinase binding protein 1; beta barrel, SH3KBP1, RUK, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}
Probab=98.87 E-value=3.8e-10 Score=85.26 Aligned_cols=56 Identities=29% Similarity=0.681 Sum_probs=49.5
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
...+++|+|||.+..++ +|+|++||++.|++..+.+||.++. ++..|+||+++++.
T Consensus 6 ~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv~~ 61 (68)
T 1wi7_A 6 SGRRCQVAFSYLPQNDD-------ELELKVGDIIEVVGEVEEGWWEGVL---NGKTGMFPSNFIKE 61 (68)
T ss_dssp CCCCEEESSCBCCSSTT-------BCCBCTTCEECCCEEEETTEEEECS---TTCCEEEETTSEEE
T ss_pred CCCEEEECccCCcCCCC-------CccCcCCCEEEEEEcCCCCeEEEEE---CCcEEEEchHHEEE
Confidence 34678999999998877 9999999999999988899999985 57899999999854
No 289
>1wxb_A Epidermal growth factor receptor pathway substrate 8-like protein; SH3, EPS8, EPS8L2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.87 E-value=1.5e-09 Score=82.09 Aligned_cols=56 Identities=23% Similarity=0.599 Sum_probs=48.6
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
...+++|+|+|.+..+. +|+|++||++.|++.. .+||.++.. ++..|+||+++++.
T Consensus 6 ~~~~~~alydy~~~~~~-------eLs~~~Gd~i~v~~~~-~~Ww~~~~~--~g~~G~~P~~yv~~ 61 (68)
T 1wxb_A 6 SGKYVKILYDFTARNAN-------ELSVLKDEVLEVLEDG-RQWWKLRSR--SGQAGYVPCNILGE 61 (68)
T ss_dssp SCCCEECSSCBCCSSSS-------BCCBCTTCEEEEEECS-SSEEEEECT--TSCEEEEETTTCCB
T ss_pred CCEEEEECccCCCCCCC-------ccCCCCCCEEEEEEcC-CCEEEEEEC--CCCEEEEEHHHeEE
Confidence 45678999999998877 9999999999999974 899999864 47899999999864
No 290
>2epd_A RHO GTPase-activating protein 4; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.87 E-value=5.5e-10 Score=86.42 Aligned_cols=56 Identities=25% Similarity=0.612 Sum_probs=50.0
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
....++|+|||.+..+. +|+|++||++.|++..+.+||.++. ++..|+||++|++.
T Consensus 9 ~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv~~ 64 (76)
T 2epd_A 9 GVVEAVACFAYTGRTAQ-------ELSFRRGDVLRLHERASSDWWRGEH---NGMRGLIPHKYITL 64 (76)
T ss_dssp CCEEEEESSCEECSSTT-------BCEECTTCEEEEEEEEETTEEEEEE---TTEEEEEESSSEEC
T ss_pred CCEEEEECcCCCCCCCC-------ccCCCCCCEEEEEEeCCCCEEEEEE---CCcEEEEehHHEEE
Confidence 44678999999998777 9999999999999988899999998 57899999999864
No 291
>2cuc_A SH3 domain containing ring finger 2; structural genomics, ring finger 2 containing protein, NPPSFA; NMR {Mus musculus}
Probab=98.87 E-value=8.6e-10 Score=83.72 Aligned_cols=58 Identities=21% Similarity=0.398 Sum_probs=50.2
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
...+++|+|+|.+..++ +|+|++||++.|++..+.+||.++... ++..|+||+++++.
T Consensus 6 ~~~~~~al~~y~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~~~-~g~~G~~P~~yv~~ 63 (70)
T 2cuc_A 6 SGNMFVALHTYSAHRPE-------ELDLQKGEGIRVLGKYQDGWLKGLSLL-TGRTGIFPSDYVIP 63 (70)
T ss_dssp SSCCEECCSCBCCCSTT-------BCCBCTTCEEEEEEEEETTEEEEEETT-TCCEEEEEGGGCEE
T ss_pred CCcEEEECeeECcCCCC-------cCCCCCCCEEEEEEecCCCeEEEEECC-CCCEEEEchHHeEE
Confidence 34578999999998877 999999999999998889999999543 47899999999864
No 292
>1nm7_A Peroxisomal membrane protein PAS20; yeast, PEX5P, PEX14P, PEX13P, import machine, SH3 domain, protein transport; NMR {Saccharomyces cerevisiae} SCOP: b.34.2.1
Probab=98.87 E-value=1.1e-09 Score=83.18 Aligned_cols=56 Identities=29% Similarity=0.777 Sum_probs=45.8
Q ss_pred cccccccccCCCCCCCCCCCccccceeccCCEEEEeecCC-----CCceEEEecCCCCCCccccchhHH
Q psy4417 97 VCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKD-----PNWWQAQLIEPTGPMGLVPSQELE 160 (440)
Q Consensus 97 ~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d-----~~ww~a~~~~~~~~~G~iPs~~~~ 160 (440)
.++.+|+|+|.|+.+.- +|+|++||++.|+++.+ .+||+++.. ++..|+||++|++
T Consensus 7 ~~~~~aly~y~a~~~~d------ELsf~~Gd~i~Vl~~~~~~~~~~gWW~g~~~--~G~~G~~PsnyV~ 67 (69)
T 1nm7_A 7 HHFARALYDFVPENPEM------EVALKKGDLMAILSKKDPLGRDSDWWKVRTK--NGNIGYIPYNYIE 67 (69)
T ss_dssp --CEEECSCCCCSSTTS------CCCCCTTCEEEECCSSSSSCCSSSCEEEEET--TTEEEEECGGGEE
T ss_pred eeEEEEEecccCCCCCC------ccCCCCCCEEEEEecCCCCCCCCCeeEEEeC--CCCEEEecHHHEE
Confidence 46788999999975432 89999999999999875 499999984 3679999999974
No 293
>2kxc_A Brain-specific angiogenesis inhibitor 1-associate 2-like protein 1; IRTKS-SH3, espfu, complex structure, protein binding; NMR {Homo sapiens}
Probab=98.87 E-value=1.2e-09 Score=82.21 Aligned_cols=57 Identities=18% Similarity=0.338 Sum_probs=48.4
Q ss_pred ccccccccccCCC-CCCCCCCCccccceeccCCEEEEeec-CCCCceEEEecCCCCCCccccchhHH
Q psy4417 96 PVCYMRCLFTYDP-KEDSLLPCKEIGLAFNHGDILQILNQ-KDPNWWQAQLIEPTGPMGLVPSQELE 160 (440)
Q Consensus 96 ~~~~vRal~dy~p-~~d~~~p~~e~~L~f~~GdIl~V~~~-~d~~ww~a~~~~~~~~~G~iPs~~~~ 160 (440)
...+++|+|||.+ ..++ +|+|++||++.|+++ .+.+||.++... ++..|+||+++++
T Consensus 5 ~~~~~~al~dy~a~~~~~-------eLs~~~Gd~i~v~~~~~~~~Ww~g~~~~-~g~~G~~P~~yv~ 63 (67)
T 2kxc_A 5 KKQKVKTIFPHTAGSNKT-------LLSFAQGDVITLLIPEEKDGWLYGEHDV-SKARGWFPSSYTK 63 (67)
T ss_dssp CCCEEEESSCBCCSSCSS-------BCCBCTTCEEEESSSSCBTTEEEEEESS-SCCEEEEEGGGEE
T ss_pred CCEEEEEeecCCCCCCCC-------CCcCCCCCEEEEeECCCCCCcEEEEECC-CCCEEEEehHHeE
Confidence 3467899999996 6665 999999999999996 899999999853 3789999999975
No 294
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=98.87 E-value=1e-08 Score=94.16 Aligned_cols=83 Identities=17% Similarity=0.214 Sum_probs=72.8
Q ss_pred CCCCeEEEEeeCCCCccEEEEecCC----CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccCCC----HHHHHHHHHhc
Q psy4417 4 PPHPLKKILGTGLSPCGLTVEQDAN----GNLIIARILAGSLIDKQGVLKVGDVILGVNGENVSS----PEDLQIEVVKS 75 (440)
Q Consensus 4 ~~~~r~v~l~r~g~~lGiti~~~~~----~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v~t----~~e~~~~L~~~ 75 (440)
+.+...+.+.+.+.+|||+|.++.+ .+++|..|.++|||+++|.|+.||+|++|||.++.+ +.++..+++..
T Consensus 16 ~~~~~~v~~~~~~~~lG~~i~~g~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~~~ 95 (206)
T 3r0h_A 16 PNKKILIELKVEKKPMGVIVCGGKNNHVTTGCVITHVYPEGQVAADKRLKIFDHICDINGTPIHVGSMTTLKVHQLFHTT 95 (206)
T ss_dssp TTSCEEEEEECTTSCCCEEEECCSSSSCCSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECCGGGSCHHHHHHHHHSC
T ss_pred CCCEEEEEEEeCCCCcCEEEecccCCCCCCCeEEEEECCCChHHhcCCCCCCCEEEEECCEEcCCCccCHHHHHHHHHhc
Confidence 5677788999999999999998654 359999999999999998899999999999999955 89999999888
Q ss_pred CCc-eeeeeccC
Q psy4417 76 DGN-IQFTIAPQ 86 (440)
Q Consensus 76 ~~~-v~l~v~p~ 86 (440)
++. +.|+|...
T Consensus 96 ~~~~v~l~v~R~ 107 (206)
T 3r0h_A 96 YEKAVTLTVFRA 107 (206)
T ss_dssp CSSEEEEEEECC
T ss_pred CCCceEEEEEec
Confidence 777 88888754
No 295
>1spk_A RSGI RUH-010, riken cDNA 1300006M19; structural genomics, SH3 domain, five-stranded barrel, mouse cDNA; NMR {Mus musculus} SCOP: b.34.2.1
Probab=98.87 E-value=1.4e-09 Score=83.02 Aligned_cols=58 Identities=21% Similarity=0.340 Sum_probs=49.3
Q ss_pred ccccccccccCCC-CCCCCCCCccccceeccCCEEEEeec-CCCCceEEEecCCCCCCccccchhHHH
Q psy4417 96 PVCYMRCLFTYDP-KEDSLLPCKEIGLAFNHGDILQILNQ-KDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 96 ~~~~vRal~dy~p-~~d~~~p~~e~~L~f~~GdIl~V~~~-~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
...+++|+|+|.+ ..++ +|+|++||++.|+++ .+.+||.++... ++..|+||+++++.
T Consensus 6 ~~~~~~al~dy~a~~~~~-------eLs~~~Gd~i~v~~~~~~~gWw~g~~~~-~g~~G~fP~~yv~~ 65 (72)
T 1spk_A 6 SGQKVKTIFPHTAGNNKT-------LLSFAQGDVLTLLIPEEKDGWLYGEHDT-TKARGWFPSSYTKL 65 (72)
T ss_dssp CSCEEECSSCBCCSSCSS-------BCCBCTTCEEEECCSSCBTTEEEEEETT-TCCEEEEEGGGCEE
T ss_pred CceEEEEeeeeCCCCCCC-------CCcCCCCCEEEEeEccCCCCcEEEEECC-CCCEEEEehHHeEE
Confidence 4467899999995 6665 999999999999987 799999999853 37899999999854
No 296
>4ag1_C Fynomer; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Synthetic construct} PDB: 4afz_C 4ag2_C* 4afq_C* 4afs_C 4afu_C 1azg_B 1nyf_A 1nyg_A 1a0n_B 3ua7_A 3ua6_A 1fyn_A 1m27_C* 1shf_A 1zbj_A 1efn_A 1avz_C 1nlo_C* 1nlp_C* 1qwe_A ...
Probab=98.87 E-value=1.3e-09 Score=86.11 Aligned_cols=57 Identities=30% Similarity=0.653 Sum_probs=50.4
Q ss_pred cccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 97 VCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 97 ~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
..+++|+|||.+..+. +|+|++||++.|++..+.+||.++... ++..|+||++|+.+
T Consensus 6 ~~~~~Alydy~a~~~~-------eLsf~~Gd~i~vl~~~~~~Ww~g~~~~-~g~~G~~P~~yv~~ 62 (84)
T 4ag1_C 6 VTLFVALYDYNATRWT-------DLSFHKGEKFQILEFGPGDWWEARSLT-TGETGYIPSNYVAP 62 (84)
T ss_dssp CCEEEESSCBCCSBTT-------BCCBCTTCEEEEEECCSSSEEEEEETT-TCCEEEEEGGGEEE
T ss_pred CEEEEEcccCCCCCCC-------cccccCCCEEEEEEecCCCeEEEEECC-CCCEEEEehHHeEE
Confidence 4578999999998877 999999999999999999999999853 46799999999865
No 297
>1ruw_A Myosin-3 isoform, MYO3; SH3 domain, yeast, high-throughput, structural genomics, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2btt_A 1va7_A
Probab=98.87 E-value=1.2e-09 Score=82.66 Aligned_cols=55 Identities=22% Similarity=0.448 Sum_probs=47.8
Q ss_pred cccccccCC-CCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 99 YMRCLFTYD-PKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 99 ~vRal~dy~-p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
.++|+|||. +..+. +|+|++||++.|++..+.+||.++... ++..|+||+++++.
T Consensus 4 ~~~alydy~~~~~~~-------eLs~~~Gd~i~v~~~~~~~W~~g~~~~-~g~~G~~P~~yv~~ 59 (69)
T 1ruw_A 4 KFEAAYDFPGSGSSS-------ELPLKKGDIVFISRDEPSGWSLAKLLD-GSKEGWVPTAYMTP 59 (69)
T ss_dssp EEEESSCBCCCSCTT-------BCCBCTTCEEEEEEECTTSEEEEEETT-SSCEEEEEGGGEEE
T ss_pred EEEEccccCCCCCCC-------cccCCCCCEEEEEEecCCCeEEEEECC-CCCEEEEehHHeEE
Confidence 478999996 77666 999999999999999899999999853 37899999999864
No 298
>2pqh_A Spectrin alpha chain, brain; SH3 domain, chimera, , structural protein; 1.75A {Gallus gallus}
Probab=98.86 E-value=1.1e-09 Score=85.54 Aligned_cols=54 Identities=26% Similarity=0.676 Sum_probs=48.7
Q ss_pred ccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 98 CYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 98 ~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
.+++|+|||.+..++ +|+|++||++.|++..+.+||.++. ++..|+||++++..
T Consensus 3 ~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv~~ 56 (80)
T 2pqh_A 3 ELVLALYDYQEKSPR-------EVTMKKGDILTLLNSTNKDWWKVEV---NDRQGFVPAAYVKK 56 (80)
T ss_dssp EEEEECSCBCCCSTT-------BCCBCTTCEEEEEECCSSSEEEEEE---TTEEEEEEGGGEEE
T ss_pred eEEEECccCCCCCCC-------ccCCCCCCEEEEEEecCCCEEEEEE---CCcEEEEehHHeEE
Confidence 467899999998877 9999999999999998999999998 46899999999865
No 299
>2dl5_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.86 E-value=1.7e-09 Score=84.12 Aligned_cols=57 Identities=19% Similarity=0.466 Sum_probs=50.0
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCC-CCceEEEecCCCCCCccccchhHHH
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKD-PNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d-~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
...+++|+|||.+..++ +|+|++||++.|++..+ .+||.++.. ++..|+||++|++.
T Consensus 12 ~~~~~~alydy~~~~~~-------eLs~~~Gd~i~v~~~~~~~~Ww~g~~~--~g~~G~~P~~yv~~ 69 (78)
T 2dl5_A 12 YPLTCKVVYSYKASQPD-------ELTIEEHEVLEVIEDGDMEDWVKARNK--VGQVGYVPEKYLQF 69 (78)
T ss_dssp SSEEEEECSCBCCCSTT-------BCCBCSSEEEEEEECCSSSSEEEEECT--TCCEEEEETTTSCC
T ss_pred CCcEEEEceeECCCCCC-------CCCCCCCCEEEEEeccCCCCcEEEEeC--CCCEEEEEhHHEEE
Confidence 45679999999998877 99999999999999875 899999874 27899999999865
No 300
>2yun_A Nostrin; nitric oxide synthase trafficker, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.86 E-value=1.4e-09 Score=84.79 Aligned_cols=56 Identities=29% Similarity=0.660 Sum_probs=50.0
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
...+++|+|+|.+..+. +|+|++||++.|++..+.+||.++. ++..|+||++++..
T Consensus 6 ~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv~~ 61 (79)
T 2yun_A 6 SGRLCKALYSFQARQDD-------ELNLEKGDIVIIHEKKEEGWWFGSL---NGKKGHFPAAYVEE 61 (79)
T ss_dssp CSEEEEESSCBCCSSTT-------BCCBCTTCEEEEEECCSSSCEEEES---SSCEEEECSTTEEE
T ss_pred CCCEEEECccCCcCCCC-------CcCCCCCCEEEEEEcCCCCEEEEEE---CCCEEEEEhHHeEE
Confidence 44678999999998877 9999999999999998999999995 57899999999865
No 301
>2x3w_D Syndapin I, protein kinase C and casein kinase substrate in N protein 1; endocytosis, N-WAsp, dynamin, pacsin I, transferase; 2.64A {Mus musculus} PDB: 2x3x_D
Probab=98.86 E-value=1.1e-09 Score=80.44 Aligned_cols=54 Identities=33% Similarity=0.696 Sum_probs=46.3
Q ss_pred ccccccccCCCCCCCCCCCccccceeccCCEEEEeecC-CCCceEEEecCCCCCCccccchhHH
Q psy4417 98 CYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQK-DPNWWQAQLIEPTGPMGLVPSQELE 160 (440)
Q Consensus 98 ~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~-d~~ww~a~~~~~~~~~G~iPs~~~~ 160 (440)
..++|+++|.+..++ +|+|++||++.|++.. +.+||.++.. ++..|+||+++++
T Consensus 4 ~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~~W~~g~~~--~g~~G~~P~~yv~ 58 (60)
T 2x3w_D 4 VRVRALYDYDGQEQD-------ELSFKAGDELTKLGEEDEQGWCRGRLD--SGQLGLYPANYVE 58 (60)
T ss_dssp CEEEECSCBCCSSSS-------BCCBCTTCEEEECSCCCSSSEEEEECS--SCCEEEEEGGGEE
T ss_pred CEEEECcccCccCCC-------cccCCCCCEEEEEEccCCCCceEEEeC--CCCEEEecHHHEE
Confidence 568999999998877 9999999999999875 4589999863 4789999999874
No 302
>1w1f_A Tyrosine-protein kinase LYN; SH3-domain, SH3 domain, tyrosine kinase, signal transduction; NMR {Homo sapiens} PDB: 1wa7_A
Probab=98.86 E-value=1.2e-09 Score=81.72 Aligned_cols=57 Identities=25% Similarity=0.577 Sum_probs=49.3
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
...+++|+|+|.+..++ +|+|++||++.|++.. ++||.++... ++..|+||+++++.
T Consensus 6 ~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~-~~Ww~g~~~~-~g~~G~~P~~yv~~ 62 (65)
T 1w1f_A 6 QGDIVVALYPYDGIHPD-------DLSFKKGEKMKVLEEH-GEWWKAKSLL-TKKEGFIPSNYVAK 62 (65)
T ss_dssp CCEEEEESSCBCCCSSS-------CCCBCTTCEEEEEEEC-SSEEEEEETT-TCCEEEEETTTEES
T ss_pred CCCEEEEceeECCcCCC-------cCCCCCCCEEEEEEcC-CCEEEEEECC-CCCEEEEEhhHEEE
Confidence 34678999999998777 9999999999999988 8999999853 36899999999753
No 303
>2ct3_A Vinexin; SH3 domian, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.85 E-value=1.4e-09 Score=82.48 Aligned_cols=58 Identities=21% Similarity=0.472 Sum_probs=50.6
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
....++|+|+|.+..++ +|+|++||++.|++..+.+||.++... ++..|+||+++++.
T Consensus 6 ~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~gW~~g~~~~-~g~~G~~P~~yv~~ 63 (70)
T 2ct3_A 6 SGTPYRAMYQYRPQNED-------ELELREGDRVDVMQQCDDGWFVGVSRR-TQKFGTFPGNYVAP 63 (70)
T ss_dssp CCEEEEESSCBCCSSTT-------BCCBCTTEEEEEEEECSSSCEEEEESS-SCCEEEECTTTEEE
T ss_pred CCcEEEECccCCcCCcC-------CccCCCCCEEEEEEECCCCEEEEEECC-CCCEEEechHHeEE
Confidence 44678999999998877 999999999999999899999998853 36899999999864
No 304
>2ekh_A SH3 and PX domain-containing protein 2A; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.85 E-value=1.3e-09 Score=85.16 Aligned_cols=55 Identities=24% Similarity=0.442 Sum_probs=49.2
Q ss_pred cccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 97 VCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 97 ~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
...++|+|+|.+..+. +|+|++||++.|+++.+.+||.++. ++..|+||++|++.
T Consensus 8 ~~~~~al~dy~~~~~~-------eLs~~~Gd~i~vl~~~~~gWw~g~~---~g~~G~~P~~yv~~ 62 (80)
T 2ekh_A 8 ATSYMTCSAYQKVQDS-------EISFPAGVEVQVLEKQESGWWYVRF---GELEGWAPSHYLVL 62 (80)
T ss_dssp CEEEEECSCBCCSSTT-------SCCBCTTCEEEEEEECTTSEEEEEE---TTEEEEEETTTEEC
T ss_pred CCEEEECCCCCCCCCC-------ccCcCCCCEEEEEEeCCCCeEEEEE---CCCEEEEEhHHeEE
Confidence 3567899999998877 9999999999999999999999997 47899999999865
No 305
>1j3t_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=98.85 E-value=2.2e-09 Score=82.46 Aligned_cols=55 Identities=27% Similarity=0.572 Sum_probs=48.4
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
...+++|+|+|.+..++ +|+|++||++.|++. +.+||.++. ++..|+||+++++.
T Consensus 9 ~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~-~~~Ww~g~~---~g~~G~~P~~yv~~ 63 (74)
T 1j3t_A 9 ENLKAQALCSWTAKKDN-------HLNFSKHDIITVLEQ-QENWWFGEV---HGGRGWFPKSYVKI 63 (74)
T ss_dssp CCCEEEESSCBCCCSTT-------BCCBCTTCEEEEEEE-CSSEEEEES---TTCCCEEEGGGEEE
T ss_pred CCeEEEECCCCCCCCCC-------ccCCCCCCEEEEEec-CCCEEEEEE---CCcEEEEchHHeEE
Confidence 45789999999998877 999999999999998 468999996 47899999999864
No 306
>2dnu_A RUH-061, SH3 multiple domains 1; RSGI, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.85 E-value=1.7e-09 Score=82.39 Aligned_cols=55 Identities=16% Similarity=0.457 Sum_probs=49.4
Q ss_pred cccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 97 VCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 97 ~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
...++|+|||.+..++ +|+|++||++.|++..+.+||.++.. +..|+||+++++.
T Consensus 8 ~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~~---g~~G~~P~~yv~~ 62 (71)
T 2dnu_A 8 EEKYVTVQPYTSQSKD-------EIGFEKGVTVEVIRKNLEGWWYIRYL---GKEGWAPASYLKK 62 (71)
T ss_dssp SEEEECSSCBCCSSTT-------BCCBCTTCEEEECCCCSSSEEEEEET---TEEEEEEGGGCEE
T ss_pred CCEEEECCccCCCCCC-------CCcCCCCCEEEEeECCCCCeEEEEEC---CcEEEEEHHHeEE
Confidence 3568999999998877 99999999999999989999999985 6799999999865
No 307
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=98.85 E-value=6.3e-09 Score=90.03 Aligned_cols=83 Identities=17% Similarity=0.318 Sum_probs=68.7
Q ss_pred CCCCeEEEEeeCCC----CccEEEEecCC--------------CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccCC--
Q psy4417 4 PPHPLKKILGTGLS----PCGLTVEQDAN--------------GNLIIARILAGSLIDKQGVLKVGDVILGVNGENVS-- 63 (440)
Q Consensus 4 ~~~~r~v~l~r~g~----~lGiti~~~~~--------------~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v~-- 63 (440)
.+..+.|.+.+.+. .|||++.++.+ .+++|..|.++|||+++| |+.||.|++|||.++.
T Consensus 21 ~~~~~~v~l~~~~~~~~~~lG~~i~~g~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~ 99 (139)
T 2vz5_A 21 QSMVQRVEIHKLRQGENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAG-LQIGDKIMQVNGWDMTMV 99 (139)
T ss_dssp -CEEEEEEEECEEETTEEECSEEEEECTTSCGGGCSSCSSTTCCCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTC
T ss_pred CCceEEEEEEEcCCCCcccccEEEEccccCChhhhhhcccCCCCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEEcCCC
Confidence 35667788887553 79999987532 569999999999999999 9999999999999994
Q ss_pred CHHHHHHHHHh-cCCceeeeeccCC
Q psy4417 64 SPEDLQIEVVK-SDGNIQFTIAPQG 87 (440)
Q Consensus 64 t~~e~~~~L~~-~~~~v~l~v~p~~ 87 (440)
+++++..+|+. .+..+.|.|....
T Consensus 100 ~~~~~~~~l~~~~g~~v~l~v~R~g 124 (139)
T 2vz5_A 100 THDQARKRLTKRSEEVVRLLVTRQS 124 (139)
T ss_dssp CHHHHHHHHCCTTCSEEEEEEEECC
T ss_pred CHHHHHHHHHhCCCCEEEEEEEECC
Confidence 79999999986 4577888887643
No 308
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=98.84 E-value=1.5e-08 Score=82.16 Aligned_cols=76 Identities=20% Similarity=0.347 Sum_probs=65.8
Q ss_pred eEEEEeeCCCCccEEEEecCCCcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHh---cCCceeee
Q psy4417 8 LKKILGTGLSPCGLTVEQDANGNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVK---SDGNIQFT 82 (440)
Q Consensus 8 r~v~l~r~g~~lGiti~~~~~~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~---~~~~v~l~ 82 (440)
..+.+++...++||.+.. .+...+|..|.++|||+++| |++||.|++|||.++ .+++++...++. .++.+.|.
T Consensus 19 ~~l~l~~~~~g~G~~l~~-~~~~~~I~~V~~gSpA~~AG-L~~GD~I~~Ing~~v~~~s~~dv~~~i~~~~~~g~~v~LL 96 (101)
T 3qik_A 19 KRLLILPQEEDYGFDIEE-KNKAVVVKSVQRGSLAEVAG-LQVGRKIYSINEDLVFLRPFSEVESILNQSFCSRRPLRLL 96 (101)
T ss_dssp EEEEECCCSSSSSEEEEE-ETTEEEEEEECTTSHHHHHT-CCTTCBEEEETTEESTTSCHHHHHHHHHHHHHTTCCEEEE
T ss_pred CeEEEEeCCCcccEEEEc-cCCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEEcCcCCHHHHHHHHHHhhccCCeEEEE
Confidence 456777888899999986 34668999999999999999 999999999999998 699999999986 58888888
Q ss_pred ecc
Q psy4417 83 IAP 85 (440)
Q Consensus 83 v~p 85 (440)
|..
T Consensus 97 V~~ 99 (101)
T 3qik_A 97 VAT 99 (101)
T ss_dssp EEC
T ss_pred Eec
Confidence 754
No 309
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.84 E-value=9.7e-09 Score=85.78 Aligned_cols=82 Identities=17% Similarity=0.251 Sum_probs=67.3
Q ss_pred CCCCeEEEEeeCCC---CccEEEEecCC---CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhc
Q psy4417 4 PPHPLKKILGTGLS---PCGLTVEQDAN---GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKS 75 (440)
Q Consensus 4 ~~~~r~v~l~r~g~---~lGiti~~~~~---~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~ 75 (440)
|..++.+.+.|.+. +|||+|.+... .+++|..|.++|||+++| |+.||+|++|||.++ .+++++..+|+.
T Consensus 13 ~~~~~~v~l~k~~~~~~~~G~~v~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~Il~Ing~~v~~~~~~~~~~~l~~- 90 (114)
T 2d8i_A 13 PKVTQSIHIEKSDTAADTYGFSLSSVEEDGIRRLYVNSVKETGLASKKG-LKAGDEILEINNRAADALNSSMLKDFLSQ- 90 (114)
T ss_dssp CCEEEEEEEECSCTTTCCCCCEEEEEEETTEEEEEEEECCTTSSHHHHT-CCTTCCEEEESSCBGGGCCHHHHHHHHTS-
T ss_pred cCceEEEEEEeCCCCccccCEEEEecCcCCcCCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHhC-
Confidence 55678899998875 69999986322 359999999999999999 999999999999999 457899888875
Q ss_pred CCceeeeeccCCC
Q psy4417 76 DGNIQFTIAPQGD 88 (440)
Q Consensus 76 ~~~v~l~v~p~~~ 88 (440)
..+.|+|...+.
T Consensus 91 -~~v~l~v~R~p~ 102 (114)
T 2d8i_A 91 -PSLGLLVRTYPE 102 (114)
T ss_dssp -SEEEEEEEECCC
T ss_pred -CcEEEEEEECCC
Confidence 377888766543
No 310
>2cub_A Cytoplasmic protein NCK1; SH3 domain, NCK1 adaptor, tyrosine kinase, signal transduction, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.84 E-value=1.1e-09 Score=87.33 Aligned_cols=56 Identities=20% Similarity=0.458 Sum_probs=50.6
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
..+.++|+|+|.+..+. +|+|++||+++|+++.+.+||.++. ++..|+||++|+++
T Consensus 16 ~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~gWw~g~~---~g~~G~~P~~yv~~ 71 (88)
T 2cub_A 16 LNMPAYVKFNYMAERED-------ELSLIKGTKVIVMEKCSDGWWRGSY---NGQVGWFPSNYVTE 71 (88)
T ss_dssp CCEEEEESSCCCCCSTT-------BCCCCTTEEEEEEEECTTSEEEEEE---TTEEEEEEGGGEEE
T ss_pred CCCEEEEccccCCCCCC-------CcCCCCCCEEEEEEccCCCeEEEEE---CCcEEEEehHHEEE
Confidence 45678999999998877 9999999999999998999999998 57899999999865
No 311
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=98.34 E-value=3.4e-10 Score=94.43 Aligned_cols=79 Identities=27% Similarity=0.426 Sum_probs=67.0
Q ss_pred CCCeEEEEeeC-CCCccEEEEecCC--CcEEEEEEcCCChhhh-cCCCCCCCEEEeECCccC--CCHHHHHHHHHhcCCc
Q psy4417 5 PHPLKKILGTG-LSPCGLTVEQDAN--GNLIIARILAGSLIDK-QGVLKVGDVILGVNGENV--SSPEDLQIEVVKSDGN 78 (440)
Q Consensus 5 ~~~r~v~l~r~-g~~lGiti~~~~~--~~i~V~~V~~gs~A~~-~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~~~ 78 (440)
..++.|.+.|. +.+|||++.++.+ .+++|..|.++|||++ +| |+.||+|++|||.++ .+++++..+++..++.
T Consensus 26 ~~~~~v~l~k~~~~glG~~l~~g~~~~~gv~V~~V~~~spA~~~aG-L~~GD~Il~ING~~v~~~~~~~~~~~l~~~~~~ 104 (112)
T 2lob_A 26 QGIRKVLLLKEDHEGLGISITGGKEHGVPILISEIHPGQPADRCGG-LHVGDAILAVNGVNLRDTKHKEAVTILSQQRGE 104 (112)
Confidence 45667888775 4799999998644 4599999999999999 77 999999999999999 6789999999887777
Q ss_pred eeeeec
Q psy4417 79 IQFTIA 84 (440)
Q Consensus 79 v~l~v~ 84 (440)
+.|+|.
T Consensus 105 v~l~V~ 110 (112)
T 2lob_A 105 IEFEVV 110 (112)
Confidence 877764
No 312
>1wx6_A Cytoplasmic protein NCK2; SH3 domain, structural genomics, signal transduction, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
Probab=98.83 E-value=3e-09 Score=85.10 Aligned_cols=58 Identities=22% Similarity=0.660 Sum_probs=50.5
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeec--CCCCceEEEecCCCCCCccccchhHHHh
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQ--KDPNWWQAQLIEPTGPMGLVPSQELEER 162 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~--~d~~ww~a~~~~~~~~~G~iPs~~~~~r 162 (440)
...+++|+|+|.+..++ +|+|++||+|.|+++ .+.+||.++.. ++..|+||++|++..
T Consensus 16 ~~~~~~alydy~~~~~~-------eLs~~~Gd~i~v~~~~~~~~~Ww~g~~~--~g~~G~~P~~yv~~~ 75 (91)
T 1wx6_A 16 VLHVVQTLYPFSSVTEE-------ELNFEKGETMEVIEKPENDPEWWKCKNA--RGQVGLVPKNYVVVL 75 (91)
T ss_dssp CCEEEEESSCCCCSSSS-------BCCCCTTCEEEEEECCSSCTTEEEEECT--TCCEEEEEGGGEEEE
T ss_pred ccEEEEEeecCCcCCCC-------cccCCCCCEEEEEECCCCCCCcEEEEeC--CCCEEEEchHHEEEC
Confidence 44679999999998877 999999999999998 68899999853 478999999998753
No 313
>2ega_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.83 E-value=2e-09 Score=81.80 Aligned_cols=55 Identities=22% Similarity=0.561 Sum_probs=48.8
Q ss_pred cccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 97 VCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 97 ~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
...++|+|||.+..++ +|+|++||++.|++..+.+||.++. ++..|+||+++++.
T Consensus 8 ~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv~~ 62 (70)
T 2ega_A 8 LEQYVVVSNYKKQENS-------ELSLQAGEVVDVIEKNESGWWFVST---SEEQGWVPATYLEA 62 (70)
T ss_dssp CBCEECCSCCCCCSSS-------SCCCCTTCBCEEEEECTTSEEEEEC---SSCEEEEEGGGCEE
T ss_pred CcEEEECceECCCCCC-------cccCCCCCEEEEEEccCCCeEEEEE---CCCEEEEehHHcEE
Confidence 3458999999998877 9999999999999999999999986 36899999999864
No 314
>1uff_A Intersectin 2; beta barrel, SH3 domain, endocytosis, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=98.83 E-value=1.1e-09 Score=88.04 Aligned_cols=56 Identities=25% Similarity=0.638 Sum_probs=49.1
Q ss_pred cccccccccCCCCCCCCCCCccccceeccCCEEEEeecC--CCCceEEEecCCCCCCccccchhHHHh
Q psy4417 97 VCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQK--DPNWWQAQLIEPTGPMGLVPSQELEER 162 (440)
Q Consensus 97 ~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~--d~~ww~a~~~~~~~~~G~iPs~~~~~r 162 (440)
..+++|+|||.+..++ +|+|++||++.|++.. +.+||.++. ++..|+||++|++..
T Consensus 5 ~~~~~Alydy~a~~~~-------eLsf~~Gd~i~v~~~~~~~~gWw~g~~---~g~~G~~P~~yv~~~ 62 (93)
T 1uff_A 5 SSGYRALYPFEARNHD-------EMSFNSGDIIQVDEKTVGEPGWLYGSF---QGNFGWFPCNYVEKM 62 (93)
T ss_dssp CCCEEESSCBCCCSSS-------CCCBCTTCEEEECSSCCCSSSEEEEEE---TTEEEEEETTTEEEC
T ss_pred CEEEEECccCCCCCCC-------CcCCCCCCEEEEeEccCCCCCEEEEEE---CCCEEEechHHeEEc
Confidence 3578999999998877 9999999999999975 889999996 478999999999653
No 315
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.83 E-value=6.4e-09 Score=84.60 Aligned_cols=82 Identities=15% Similarity=0.195 Sum_probs=67.8
Q ss_pred CCCCeEEEEeeC-CCCccEEEEecCC--CcEEEEEEcCCChhhhc-CCCCCCCEEEeECCccCCC-HHHHHHHHHhcCCc
Q psy4417 4 PPHPLKKILGTG-LSPCGLTVEQDAN--GNLIIARILAGSLIDKQ-GVLKVGDVILGVNGENVSS-PEDLQIEVVKSDGN 78 (440)
Q Consensus 4 ~~~~r~v~l~r~-g~~lGiti~~~~~--~~i~V~~V~~gs~A~~~-G~L~~GD~Il~VNg~~v~t-~~e~~~~L~~~~~~ 78 (440)
+.+.+.+.+... +.+|||++.++.+ .+++|..|.++|||+++ | |++||+|++|||.++.+ +.++..+++..++.
T Consensus 7 ~~~~~~~~v~~~~~~~~G~~~~gg~~~~~~v~V~~V~~~spA~~agG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~~~~ 85 (100)
T 2edp_A 7 GGSFQYVPVQLQGGAPWGFTLKGGLEHCEPLTVSKIEDGGKAALSQK-MRTGDELVNINGTPLYGSRQEALILIKGSFRI 85 (100)
T ss_dssp CCCCEEEEEECCSCSCCCCCEEEEGGGTEEEEECCCCTTSHHHHHTS-CCTTCEEEEETTEECCSCSHHHHHHHHTCCSS
T ss_pred CCCcEEEEEEECCCCCcCEEEeccCCCCCCeEEEEECCCCHHHHcCC-CCCCCEEEEECCEEccchHHHHHHHHHhCCCe
Confidence 456666777654 4599999998654 34899999999999999 7 99999999999999943 68888889888888
Q ss_pred eeeeeccC
Q psy4417 79 IQFTIAPQ 86 (440)
Q Consensus 79 v~l~v~p~ 86 (440)
+.|.|...
T Consensus 86 v~l~v~R~ 93 (100)
T 2edp_A 86 LKLIVRRR 93 (100)
T ss_dssp CEEEEEEC
T ss_pred EEEEEEeC
Confidence 88988764
No 316
>2vkn_A Protein SSU81; membrane, SH3 domain, transmembrane, membrane; 2.05A {Saccharomyces cerevisiae}
Probab=98.83 E-value=1.7e-09 Score=82.12 Aligned_cols=58 Identities=26% Similarity=0.664 Sum_probs=47.9
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
..+.++|+|+|.+..++ ..+|+|++||++.|++. +.+||.++.. ++..|+||+++++.
T Consensus 4 ~~~~~~alydy~~~~~~-----~~eLsf~~Gd~i~v~~~-~~~Ww~g~~~--~g~~G~~P~~yv~~ 61 (70)
T 2vkn_A 4 FIYKAKALYPYDADDDD-----AYEISFEQNEILQVSDI-EGRWWKARRA--NGETGIIPSNYVQL 61 (70)
T ss_dssp CEEEEEESSCBCCCSSS-----TTBCCBCTTCEEEEECT-TSSEEEEECT--TSCEEEEEGGGEEE
T ss_pred cCEEEEECccCCCCCCC-----CCcccCCCCCEEEEEEc-CCCeEEEEEC--CCCEEEEehHHEEE
Confidence 34678999999997542 12899999999999986 7899999865 57899999999864
No 317
>2yup_A Vinexin; sorbin and SH3 domain-containing protein 3, SH3-containing adapter molecule 1, SCAM-1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.83 E-value=2.2e-09 Score=85.76 Aligned_cols=58 Identities=17% Similarity=0.461 Sum_probs=50.5
Q ss_pred cccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHHh
Q psy4417 97 VCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEER 162 (440)
Q Consensus 97 ~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~r 162 (440)
...++|+|||.+..++ +|+|++||++.|++..+.+||.++... ++..|+||++|++..
T Consensus 17 ~~~~~alydy~~~~~~-------eLsf~~Gd~i~v~~~~~~~Ww~g~~~~-~g~~G~fP~~yv~~~ 74 (90)
T 2yup_A 17 YGEAVAQYTFKGDLEV-------ELSFRKGEHICLIRKVNENWYEGRITG-TGRQGIFPASYVQVS 74 (90)
T ss_dssp SEEEEECSCCCCCSSS-------BCCCCTTCEEEESSCCCSSEEEEECTT-TCCEEEEEGGGEEEE
T ss_pred ceEEEEeecCCcCCcC-------cCCCCCCCEEEEEEEcCCCeEEEEECC-CCCEEEEehHHeEEc
Confidence 4567899999998777 999999999999999899999998743 378999999999753
No 318
>2o2o_A SH3-domain kinase-binding protein 1; CIN85, protein binding; NMR {Homo sapiens}
Probab=98.82 E-value=9.5e-10 Score=88.35 Aligned_cols=56 Identities=29% Similarity=0.681 Sum_probs=50.1
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
...+++|+|+|.+..++ +|+|++||++.|++..+++||.+++ ++..|+||++|+..
T Consensus 17 ~~~~~~Alydy~a~~~~-------eLsf~~Gd~i~V~~~~~~gWw~g~~---~g~~G~fPsnyV~~ 72 (92)
T 2o2o_A 17 RRRRCQVAFSYLPQNDD-------ELELKVGDIIEVVGEVEEGWWEGVL---NGKTGMFPSNFIKE 72 (92)
T ss_dssp SSCEEEECSCBCCCSSS-------CCCBCSSCEEECCCGGGSSCBCCEE---TTEECCBCSSSEEC
T ss_pred CCeEEEEccccCCCCCc-------cccccCCCEEEEeEecCCCEEEEEE---CCeEEEeehHHEEE
Confidence 45678999999998877 9999999999999988999999997 57899999999864
No 319
>1x6b_A RHO guanine exchange factor (GEF) 16; SH3 domain, neuroblastoma, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.82 E-value=2.3e-09 Score=83.52 Aligned_cols=58 Identities=14% Similarity=0.298 Sum_probs=50.4
Q ss_pred CccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 95 KPVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 95 ~~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
.....++|+|+|.+..++ +|+|++||++.|+.. +.+||.++... ++..|+||++++..
T Consensus 15 ~~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~-~~gW~~g~~~~-~g~~G~fP~~yv~~ 72 (79)
T 1x6b_A 15 GDLPQVEITKAFFAKQAD-------EVTLQQADVVLVLQQ-EDGWLYGERLR-DGETGWFPEDFARF 72 (79)
T ss_dssp SSCCEEEESSCCCCCSSS-------BCCCCTTEEEEEEEE-ETTEEEEEETT-TCCEEEECGGGCEE
T ss_pred CCCCEEEECeeECCCCcC-------CcCCCCCCEEEEEEe-CCCEEEEEECC-CCCEEEEchHHEEE
Confidence 345678999999998877 999999999999999 99999999853 36899999999854
No 320
>2enm_A Sorting nexin-9; SH3-like barrel, protein transport, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.82 E-value=2.7e-09 Score=82.58 Aligned_cols=57 Identities=21% Similarity=0.482 Sum_probs=49.6
Q ss_pred ccccccccccCCCC-CCCCCCCccccceeccCCEEEEeecC-CCCceEEEecCCCCCCccccchhHHH
Q psy4417 96 PVCYMRCLFTYDPK-EDSLLPCKEIGLAFNHGDILQILNQK-DPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 96 ~~~~vRal~dy~p~-~d~~~p~~e~~L~f~~GdIl~V~~~~-d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
...+++|+|+|.+. .++ +|+|++||++.|+... +.+||.++.. ++..|+||+++++.
T Consensus 8 ~~~~~~al~dy~~~~~~~-------eLs~~~Gd~i~v~~~~~~~gW~~g~~~--~g~~G~~P~~yv~~ 66 (77)
T 2enm_A 8 MATKARVMYDFAAEPGNN-------ELTVTEGEIITVTNPNVGGGWLEGKNN--KGEQGLVPTDYVEI 66 (77)
T ss_dssp SCEEEEESSCCCCCTTSS-------BCCCCTTCEEEEEESCCSSSEEEEECT--TCCEEEEETTTEEE
T ss_pred CCcEEEECccCCCCCCCC-------eecCCCCCEEEEeEccCCCCeEEEEEC--CCCEEEeehHHeEE
Confidence 35689999999998 666 9999999999999985 7999999964 47899999999864
No 321
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.82 E-value=3.3e-09 Score=86.32 Aligned_cols=78 Identities=19% Similarity=0.245 Sum_probs=67.0
Q ss_pred CCeEEEEeeCCCCccEEEEecCCCcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcCCceeeee
Q psy4417 6 HPLKKILGTGLSPCGLTVEQDANGNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSDGNIQFTI 83 (440)
Q Consensus 6 ~~r~v~l~r~g~~lGiti~~~~~~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~~~v~l~v 83 (440)
+...+.+.+...++||++.+. .+++|..|.++|||+++| |+.||+|++|||.++ .++.++..+|+..++.+.|.|
T Consensus 15 ~~~~v~l~~~~~g~G~~~~~~--~~~~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~v 91 (100)
T 1whd_A 15 EKLQITIRRGKDGFGFTICCD--SPVRVQAVDSGGPAERAG-LQQLDTVLQLNERPVEHWKCVELAHEIRSCPSEIILLV 91 (100)
T ss_dssp EEEEEEEECCSSSSSCBCCCS--SSCBCCBCCTTSHHHHHT-CCSSCEEEEETTEECTTCCHHHHHHHHHHCSSEEEEEE
T ss_pred ceEEEEEECCCCeeeEEEeCC--CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEE
Confidence 345677778878999998763 568999999999999999 999999999999999 478999999998877888888
Q ss_pred ccC
Q psy4417 84 APQ 86 (440)
Q Consensus 84 ~p~ 86 (440)
...
T Consensus 92 ~R~ 94 (100)
T 1whd_A 92 WRV 94 (100)
T ss_dssp EEC
T ss_pred EEC
Confidence 654
No 322
>1udl_A Intersectin 2, KIAA1256; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=98.81 E-value=1.9e-09 Score=87.56 Aligned_cols=56 Identities=32% Similarity=0.917 Sum_probs=49.6
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
....++|+|||.+..++ +|+|++||++.|++..+.+||.++. ++..|+||++|+..
T Consensus 33 ~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv~~ 88 (98)
T 1udl_A 33 PVCQVIAMYDYAANNED-------ELSFSKGQLINVMNKDDPDWWQGEI---NGVTGLFPSNYVKM 88 (98)
T ss_dssp CSEEEEESSCCCCSSTT-------SCCCCTTCEEEECBCCSSSEEBCBS---SSCBCCEETTSEEE
T ss_pred CceEEEECCCCCCCCCC-------ccCCcCCCEEEEEEecCCCEEEEEE---CCcEEEEehHHeEE
Confidence 35678999999998877 9999999999999998999999985 57899999999863
No 323
>1hsq_A Phospholipase C-gamma (SH3 domain); phosphoric diester hydrolase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2hsp_A
Probab=98.81 E-value=6.2e-10 Score=84.90 Aligned_cols=55 Identities=27% Similarity=0.665 Sum_probs=47.8
Q ss_pred cccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCc-cccchhHHH
Q psy4417 97 VCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMG-LVPSQELEE 161 (440)
Q Consensus 97 ~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G-~iPs~~~~~ 161 (440)
..+++|+|+|.+..++ +|+|++||++.|+++.+.+||.++. ++..| +||++|++.
T Consensus 6 ~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~gG~~P~~yv~~ 61 (71)
T 1hsq_A 6 KCAVKALFDYKAQRED-------ELTFIKSAIIQNVEKQEGGWWRGDY---GGKKQLWFPSNYVEE 61 (71)
T ss_dssp SSCCCCSSCCCCSSSS-------SCCCCTTCCCBSCCCBTTTEECCBC---SSSCSCCEETTTCCS
T ss_pred CeEEEECCCCCcCCCC-------ccCCCCCCEEEEEEecCCCEEEEEE---CCeEEeEEChHHcEE
Confidence 4578999999998877 9999999999999998999999987 34454 999999864
No 324
>2rqr_A CED-12 homolog, engulfment and cell motility protein 1, linker, D of cytokinesis protein 2; KIAA0209, KIAA0281, apoptosis, membrane, phagocytosis; NMR {Homo sapiens}
Probab=98.80 E-value=3.3e-09 Score=89.32 Aligned_cols=58 Identities=16% Similarity=0.333 Sum_probs=50.5
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
...+++|+|+|.+..++ +|+|++||++.|+++. .+||+++...+++..|+||++|++.
T Consensus 58 ~~~~~~Alydy~a~~~~-------eLsf~~Gd~i~vl~~~-~gWw~g~~~~~~g~~G~fP~nyV~~ 115 (119)
T 2rqr_A 58 KERHGVAIYNFQGSGAP-------QLSLQIGDVVRIQETC-GDWYRGYLIKHKMLQGIFPKSFIHI 115 (119)
T ss_dssp CCEEEEBCSCBCCCSTT-------BCCBCTTCEEEEEEEE-TTEEEEEESSCTTCEEEEEGGGBCC
T ss_pred CceEEEEccccCCCCCC-------cccCcCCCEEEEEEcC-CCEEEEEECCCCCCEEEeChhHEEE
Confidence 35689999999998887 9999999999999975 5999999875457899999999864
No 325
>1s1n_A Nephrocystin 1; beta barrel, cell adhesion; NMR {Homo sapiens}
Probab=98.80 E-value=1.7e-09 Score=81.64 Aligned_cols=56 Identities=29% Similarity=0.513 Sum_probs=48.5
Q ss_pred cccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 97 VCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 97 ~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
...++|+|+|.+..+. +|+|++||++.|+...+.+||.++.. ++..|+||+++++.
T Consensus 10 ~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~~--~g~~G~~P~~yv~~ 65 (68)
T 1s1n_A 10 GEEYIAVGDFTAQQVG-------DLTFKKGEILLVIEKKPDGWWIAKDA--KGNEGLVPRTYLEP 65 (68)
T ss_dssp CEEEEECSCBCCSSSS-------CCCBCSSEEEEECSCCSSSEEEEECS--SSCEEEEESTTEEE
T ss_pred CCEEEEcccCCCCCCC-------cCCCCCCCEEEEEEcCCCCeEEEEEC--CCCEEEEehHHeEE
Confidence 3457799999998877 99999999999999988999999954 47899999999753
No 326
>2ct4_A CDC42-interacting protein 4; thyroid receptor interacting protein 10, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.79 E-value=3e-09 Score=80.74 Aligned_cols=55 Identities=15% Similarity=0.396 Sum_probs=47.4
Q ss_pred ccccccccCCCCCCCCCCCccccceeccCCEEEEeecCC-CCceEEEecCCCCCCccccchhHHH
Q psy4417 98 CYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKD-PNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 98 ~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d-~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
.+++|+|||.+..++ +|+|++||++.|++..+ .+||.++.. ++..|+||+++++.
T Consensus 8 ~~~~alydy~~~~~~-------eLs~~~Gd~i~vl~~~~~~gW~~~~~~--~g~~G~~P~~yv~~ 63 (70)
T 2ct4_A 8 GHCVAIYHFEGSSEG-------TISMAEGEDLSLMEEDKGDGWTRVRRK--EGGEGYVPTSYLRV 63 (70)
T ss_dssp CEEEESSCBCCCSTT-------CCCBCTTCEEEEEECCSSSCEEEEECS--SSCEEEEEGGGEEE
T ss_pred CEEEEcccCCCCCCC-------cCCCCCCCEEEEEeccCCCCeEEEEeC--CCCEEEEEhHHeEE
Confidence 468999999998877 99999999999999775 459999874 47899999999864
No 327
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.79 E-value=5.7e-08 Score=78.39 Aligned_cols=80 Identities=19% Similarity=0.222 Sum_probs=67.2
Q ss_pred CCCCeEEEEeeCCCCccEEEEecCCCcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhc--CCce
Q psy4417 4 PPHPLKKILGTGLSPCGLTVEQDANGNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKS--DGNI 79 (440)
Q Consensus 4 ~~~~r~v~l~r~g~~lGiti~~~~~~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~--~~~v 79 (440)
+.+.+.+.+.+...+|||+|... ..+++|..|.++ |+.+| |+.||.|++|||.++ .+++++..+|+.. +..+
T Consensus 8 ~~~~~~v~l~~~~~g~G~~i~~~-~~Gv~V~~v~~~--a~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v 83 (96)
T 1ujv_A 8 QAELMTLTIVKGAQGFGFTIADS-PTGQRVKQILDI--QGCPG-LCEGDLIVEINQQNVQNLSHTEVVDILKDCPIGSET 83 (96)
T ss_dssp CCCCEEEEEECCSSSSSEEEEEE-TTEEEEEEESCG--GGSTT-CCSSCEEEEETTEECSSCCHHHHHHHHHHSCTTSEE
T ss_pred CceEEEEEEEeCCCceeEEEEcC-CCCEEEEEEecc--cccCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCCCEE
Confidence 56778899999889999999753 346899999983 67888 999999999999999 5789999999974 6788
Q ss_pred eeeeccCC
Q psy4417 80 QFTIAPQG 87 (440)
Q Consensus 80 ~l~v~p~~ 87 (440)
.|+|....
T Consensus 84 ~l~v~R~g 91 (96)
T 1ujv_A 84 SLIIHRGS 91 (96)
T ss_dssp EEEEECCS
T ss_pred EEEEEECC
Confidence 99887643
No 328
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.79 E-value=7.1e-09 Score=84.75 Aligned_cols=82 Identities=26% Similarity=0.349 Sum_probs=68.5
Q ss_pred CCCCeEEEEeeCCCCccEEEEecCC--CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccCCC--HHHHHHHHHhcCCce
Q psy4417 4 PPHPLKKILGTGLSPCGLTVEQDAN--GNLIIARILAGSLIDKQGVLKVGDVILGVNGENVSS--PEDLQIEVVKSDGNI 79 (440)
Q Consensus 4 ~~~~r~v~l~r~g~~lGiti~~~~~--~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v~t--~~e~~~~L~~~~~~v 79 (440)
++..+++.+ +++.+|||++.++.+ .+++|..|.++|||+++| |+.||.|++|||.++.+ ++++..+|+..++.+
T Consensus 3 ~g~~~~v~~-~~~~~lG~~l~~g~~~~~~~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v 80 (103)
T 1v5l_A 3 SGSSGNVVL-PGPAPWGFRLSGGIDFNQPLVITRITPGSKAAAAN-LCPGDVILAIDGFGTESMTHADAQDRIKAASYQL 80 (103)
T ss_dssp SCCCBCCEE-ESSSCCSBCCEEETTTTEEEECSCBCTTSTTGGGT-CCTTCBEEEETTEECSSCCHHHHHHHHTTCCSEE
T ss_pred CCCEEEEEE-cCCCCcCEEEeccccCCCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeE
Confidence 345555555 566799999998764 358999999999999999 99999999999999955 999999999778889
Q ss_pred eeeeccCC
Q psy4417 80 QFTIAPQG 87 (440)
Q Consensus 80 ~l~v~p~~ 87 (440)
.|.|....
T Consensus 81 ~l~v~R~g 88 (103)
T 1v5l_A 81 CLKIDRAE 88 (103)
T ss_dssp ECEECCCT
T ss_pred EEEEEECC
Confidence 99887643
No 329
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=98.79 E-value=4.1e-08 Score=81.64 Aligned_cols=80 Identities=21% Similarity=0.340 Sum_probs=64.9
Q ss_pred CCCeEEEEe-eCCCCccEEEEecCC--CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcCCce
Q psy4417 5 PHPLKKILG-TGLSPCGLTVEQDAN--GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSDGNI 79 (440)
Q Consensus 5 ~~~r~v~l~-r~g~~lGiti~~~~~--~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~~~v 79 (440)
+.++++.+. +...+|||++.++.+ .+++|..|.+++||+++| |+.||.|++|||.++ .++.++..+++.. +.+
T Consensus 14 ~~~~~v~~~~~~~~~lG~~l~~~~~~~~gv~V~~V~~~s~A~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~~~~~-~~v 91 (114)
T 1x5n_A 14 NKEKKVFISLVGSRGLGCSISSGPIQKPGIFISHVKPGSLSAEVG-LEIGDQIVEVNGVDFSNLDHKEAVNVLKSS-RSL 91 (114)
T ss_dssp CSSEEEEECCCSSCCCCEEEEECCSSSCSEEEEEECTTSTTTTTT-CCTTCEEEEETTEETTSCCTTHHHHHHHHC-SSE
T ss_pred CCcEEEEEEEcCCCceeEEEeecCCCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcC-CeE
Confidence 456777775 456799999997643 569999999999999999 999999999999999 4566788888765 678
Q ss_pred eeeeccC
Q psy4417 80 QFTIAPQ 86 (440)
Q Consensus 80 ~l~v~p~ 86 (440)
.|.|...
T Consensus 92 ~l~v~r~ 98 (114)
T 1x5n_A 92 TISIVAA 98 (114)
T ss_dssp EEEECSS
T ss_pred EEEEEcC
Confidence 8888643
No 330
>1bb9_A Amphiphysin 2; transferase, SH3 domain; 2.20A {Rattus norvegicus} SCOP: b.34.2.1 PDB: 1muz_A 1mv0_B
Probab=98.78 E-value=1.6e-09 Score=90.65 Aligned_cols=60 Identities=15% Similarity=0.293 Sum_probs=50.6
Q ss_pred CCccccccccccCCCCCCCCCCCccccceeccCCEEEEee-----cCCCCceEEEecCC-------CCCCccccchhHH
Q psy4417 94 IKPVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILN-----QKDPNWWQAQLIEP-------TGPMGLVPSQELE 160 (440)
Q Consensus 94 ~~~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~-----~~d~~ww~a~~~~~-------~~~~G~iPs~~~~ 160 (440)
.....+++|+|||.+..++ +|+|++||+|.|+. ..+.+||.++.... ++..|+||++|++
T Consensus 41 ~~~~~~~~Alydy~a~~~d-------ELsf~~GDiI~Vl~~~~~~~~~~gWw~G~~~~t~~~~~~~~g~~G~fPsnyV~ 112 (115)
T 1bb9_A 41 PGFMFKVQAQHDYTATDTD-------ELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELEKCRGVFPENFTE 112 (115)
T ss_dssp TTCCEEEEESSCBCCSSTT-------BCCBCTTCEEEEECCSCGGGCCTTEEEEEEHHHHHTTCCHHHHCEEEEGGGEE
T ss_pred CCcceEEEECCccCCCCCC-------ccCcCCCCEEEEeeccCCcccCCCeEEEEeCCCcccccccCCCEEEechHHEE
Confidence 3345679999999998877 99999999999999 78999999987521 2579999999975
No 331
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=98.78 E-value=3.9e-08 Score=81.44 Aligned_cols=81 Identities=17% Similarity=0.244 Sum_probs=66.9
Q ss_pred CeEEEEeeC-CCCccEEEEecCC-CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccCCC--HHHHHHHHHhc-CCceee
Q psy4417 7 PLKKILGTG-LSPCGLTVEQDAN-GNLIIARILAGSLIDKQGVLKVGDVILGVNGENVSS--PEDLQIEVVKS-DGNIQF 81 (440)
Q Consensus 7 ~r~v~l~r~-g~~lGiti~~~~~-~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v~t--~~e~~~~L~~~-~~~v~l 81 (440)
...|.+.++ ..+||+++.++.+ .+++|..|.++|||+++|.|+.||.|++|||.++.+ ++++..+|+.. ++.+.|
T Consensus 2 ~~~v~l~~~~~~glG~~~~~~~~~~~~~V~~v~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~v~l 81 (112)
T 1qau_A 2 VISVRLFKRKVGGLGFLVKERVSKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHVV 81 (112)
T ss_dssp EEEEEEECBTTTBTSEEEEECSSSSCEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTSCHHHHHHHHHHSCSSSEEE
T ss_pred EEEEEEEcCCCCceeEEEEecCCCCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCcEEE
Confidence 356777665 5799999988653 469999999999999999449999999999999955 99999999864 578888
Q ss_pred eeccCC
Q psy4417 82 TIAPQG 87 (440)
Q Consensus 82 ~v~p~~ 87 (440)
.+....
T Consensus 82 ~v~R~g 87 (112)
T 1qau_A 82 LILRGP 87 (112)
T ss_dssp EEEECC
T ss_pred EEEeCC
Confidence 887643
No 332
>1i1j_A Melanoma derived growth regulatory protein; SH3 subdomain, hormone/growth factor complex; 1.39A {Homo sapiens} SCOP: b.34.2.1 PDB: 1k0x_A 1hjd_A
Probab=98.77 E-value=2.6e-09 Score=88.30 Aligned_cols=59 Identities=17% Similarity=0.364 Sum_probs=48.8
Q ss_pred cccccccccCCCCCCCCCCCccccceeccCCEEEEeec-CC--CCceEEEecCC-----CCCCccccchhHHHh
Q psy4417 97 VCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQ-KD--PNWWQAQLIEP-----TGPMGLVPSQELEER 162 (440)
Q Consensus 97 ~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~-~d--~~ww~a~~~~~-----~~~~G~iPs~~~~~r 162 (440)
...++|+|||.+..+. +|+|++||++.|+++ .+ .+||.++..+. .+..|+||++|+.+.
T Consensus 22 ~~~~~Alydy~a~~~~-------ELsf~~GDiI~Vl~k~~~~g~dWW~G~~~~~~~~~~~g~~G~fPsnYV~~~ 88 (108)
T 1i1j_A 22 ISMAVALQDYMAPDCR-------FLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYFPSSIVRED 88 (108)
T ss_dssp SEEEEESSCBCCSSTT-------BCCBCTTCEEEEEEEECGGGTTEEEEEEBCSSTTCBCSCCEEEEGGGEEEE
T ss_pred eeEEEECCccCCCCCC-------ccccCCCCEEEEEEecCCCCCCEEEEEECCccccCCCCCEEEEchhHEEEc
Confidence 4568999999999877 999999999999997 33 35999998631 278999999999753
No 333
>2oi3_A Tyrosine-protein kinase HCK; human HCK, SH3, SRC-type tyrosine kinase, transferase; NMR {Homo sapiens} PDB: 2oj2_A 4hck_A 5hck_A
Probab=98.77 E-value=7.1e-09 Score=81.94 Aligned_cols=57 Identities=25% Similarity=0.586 Sum_probs=49.4
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
...+++|+|||.+..++ +|+|++||++.|++.. ++||.++... ++..|+||+++++.
T Consensus 24 ~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~-~~Ww~g~~~~-~g~~G~~P~~yv~~ 80 (86)
T 2oi3_A 24 EDIIVVALYDYEAIHHE-------DLSFQKGDQMVVLEES-GEWWKARSLA-TRKEGYIPSNYVAR 80 (86)
T ss_dssp TSEEEEESSCCCCSSSS-------CCCCCTTCEEEEEEES-SSEEEEEETT-TCCEEEEEGGGEEE
T ss_pred CCcEEEECccCCCCCCC-------cCcCCCCCEEEEEEcC-CCeEEEEECC-CCCEEEEehHHcEE
Confidence 34689999999998877 9999999999999987 4999999853 47899999999864
No 334
>3qwx_X Cell death abnormality protein 2; cell engulfment, signaling protein; 2.01A {Caenorhabditis elegans}
Probab=98.76 E-value=7.5e-09 Score=92.94 Aligned_cols=88 Identities=19% Similarity=0.361 Sum_probs=63.5
Q ss_pred CCccCCCHHHHHHHHHhcCCceeeeeccCCCCCCCCCCccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCC
Q psy4417 58 NGENVSSPEDLQIEVVKSDGNIQFTIAPQGDDASLPIKPVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDP 137 (440)
Q Consensus 58 Ng~~v~t~~e~~~~L~~~~~~v~l~v~p~~~~~~~~~~~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~ 137 (440)
.+....+..++....+......+....|.+. ....+++|+|||.+..+. +|+|++||++.|+++.++
T Consensus 85 ~~~~F~sl~eLv~~y~~~~~~~~~L~~P~~~------p~~~~~~alydy~~~~~~-------eLsf~~Gd~i~v~~~~~~ 151 (174)
T 3qwx_X 85 ANQSFPDIPALLNHFKMRVLTEASLLAAYKK------PIIEVVVGTFKFTGERET-------DLPFEQGERLEILSKTNQ 151 (174)
T ss_dssp TTEEESSHHHHHHHTTSSCSSSCCCCEECCC------CCSEEEEESSCBCCSSTT-------BCCBCTTCEEEEEECCSS
T ss_pred CCeecCcHHHHhhhhhcCccccccccccccc------ccccEEEEecCcccCCCC-------ccccccCCEEEEEEccCC
Confidence 3444477777776655433222222222211 144678999999999877 999999999999999999
Q ss_pred CceEEEecCCCCCCccccchhHH
Q psy4417 138 NWWQAQLIEPTGPMGLVPSQELE 160 (440)
Q Consensus 138 ~ww~a~~~~~~~~~G~iPs~~~~ 160 (440)
+||+++.. ++..|+||+++++
T Consensus 152 ~Ww~g~~~--~g~~G~~P~nyv~ 172 (174)
T 3qwx_X 152 DWWEARNA--LGTTGLVPANYVQ 172 (174)
T ss_dssp SEEEEECT--TCCEEEEEGGGEE
T ss_pred CeEEEEEC--CCCEEEEChHHEE
Confidence 99999963 5789999999975
No 335
>3reb_B Tyrosine-protein kinase HCK; HIV-1 NEF, SH3 domain binding, signaling, HCK SH3 domain, PR binding; 3.45A {Homo sapiens}
Probab=98.76 E-value=4.5e-09 Score=83.93 Aligned_cols=55 Identities=25% Similarity=0.582 Sum_probs=48.1
Q ss_pred ccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 98 CYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 98 ~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
.+++|+|||.+..++ +|+|.+||++.|++. +++||.++... ++..|+||+++++.
T Consensus 4 ~~~~Alydy~~~~~~-------eLs~~~Gd~i~v~~~-~~~Ww~g~~~~-~g~~G~~P~~yv~~ 58 (90)
T 3reb_B 4 IIVVALYDYVSWSPD-------DLSFQKGDQMVVLEE-SGEWWKARSLA-TRKEGYIPSNYVAR 58 (90)
T ss_dssp CEEEESSCBCCSSTT-------BCCBCTTCEEEEEEC-SSSEEEEEETT-TCCEEEEEGGGEEE
T ss_pred EEEEECCccCcCCcC-------cCCCCCCCEEEEEEe-CCCEEEEEECC-CCCEEEEehhheEE
Confidence 468999999998877 999999999999998 56899999853 36899999999975
No 336
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=98.75 E-value=4.8e-08 Score=77.76 Aligned_cols=77 Identities=25% Similarity=0.440 Sum_probs=64.5
Q ss_pred CCeEEEEeeCC--CCccEEEEecCCCcEEEEEEcCCChhhhcCCCCCCCEEEeECCccCC--CHHHHHHHHHhcCCceee
Q psy4417 6 HPLKKILGTGL--SPCGLTVEQDANGNLIIARILAGSLIDKQGVLKVGDVILGVNGENVS--SPEDLQIEVVKSDGNIQF 81 (440)
Q Consensus 6 ~~r~v~l~r~g--~~lGiti~~~~~~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v~--t~~e~~~~L~~~~~~v~l 81 (440)
++..+.+.+.. ..+|+.+. .+++|..|.++|||+++|.|+.||.|++|||.++. ++.++..+|+..++.+.|
T Consensus 2 ~~~~v~~~~~~~~~~~g~~~~----~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l 77 (92)
T 3cyy_A 2 KPTKVTLVKSAKNEEYGLRLA----SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKGKLKM 77 (92)
T ss_dssp CCEEEEEECSSTTSCCCEEEE----EEEEEEEECTTCHHHHSCCCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTEEEE
T ss_pred CcEEEEEEeCCCCCCCCEEEe----CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEEE
Confidence 35566666543 58999886 35899999999999999999999999999999996 999999999987778888
Q ss_pred eeccC
Q psy4417 82 TIAPQ 86 (440)
Q Consensus 82 ~v~p~ 86 (440)
.+...
T Consensus 78 ~v~r~ 82 (92)
T 3cyy_A 78 VVQRD 82 (92)
T ss_dssp EEEC-
T ss_pred EEEeC
Confidence 88653
No 337
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=98.75 E-value=3.6e-08 Score=78.28 Aligned_cols=75 Identities=19% Similarity=0.327 Sum_probs=61.7
Q ss_pred EEEEeeC-CC--CccEEEEecCCCcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHh--cCCceee
Q psy4417 9 KKILGTG-LS--PCGLTVEQDANGNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVK--SDGNIQF 81 (440)
Q Consensus 9 ~v~l~r~-g~--~lGiti~~~~~~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~--~~~~v~l 81 (440)
.+.+.+. +. .||+++... ..+++|..|.++|||+++| |+.||.|++|||.++ .+++++..+|+. .++.+.|
T Consensus 6 ~~~~~~~~~~~~~lG~~~~~~-~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v~l 83 (90)
T 2eaq_A 6 RISINQTPGKSLDFGFTIKWD-IPGIFVASVEAGSPAEFSQ-LQVDDEIIAINNTKFSYNDSKEWEEAMAKAQETGHLVM 83 (90)
T ss_dssp EEEEECCTTCSSCCSEEEEEE-TTEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECCTTCHHHHHHHHHHHHHHTEEEE
T ss_pred EEEEEecCCCCCcccEEEEec-CCCEEEEEECCCChHHHcC-CCCCCEEEEECCEEccCCCHHHHHHHHHhcCCCCEEEE
Confidence 4455543 33 699999753 4579999999999999999 999999999999999 899999999984 4778888
Q ss_pred eecc
Q psy4417 82 TIAP 85 (440)
Q Consensus 82 ~v~p 85 (440)
.|..
T Consensus 84 ~v~R 87 (90)
T 2eaq_A 84 DVRR 87 (90)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 8754
No 338
>1jqq_A PEX13P, peroxisomal membrane protein PAS20, PAS20P, roxin-13; compact beta-barrel of five anti-parrallel beta-strands; 2.65A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1n5z_A
Probab=98.75 E-value=6.5e-09 Score=83.31 Aligned_cols=60 Identities=28% Similarity=0.745 Sum_probs=50.0
Q ss_pred CCccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCC-----CceEEEecCCCCCCccccchhHHH
Q psy4417 94 IKPVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDP-----NWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 94 ~~~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~-----~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
.....+++|+|||.+..++. +|+|++||++.|++..+. +||.++.. ++..|+||++|++.
T Consensus 11 ~~~~~~~~alydy~~~~~~~------eLsf~~Gd~i~v~~~~~~~~~~~gWw~g~~~--~g~~G~~P~~yv~~ 75 (92)
T 1jqq_A 11 PSKLEFARALYDFVPENPEM------EVALKKGDLMAILSKKDPLGRDSDWWKVRTK--NGNIGYIPYNYIEI 75 (92)
T ss_dssp STTCEEEEESSBBCCSSTTT------BCCBCTTCEEEEEEEECTTSCEEEEEEEEET--TSCEEEEEGGGEEE
T ss_pred CCcCEEEEECccCCCCCCCC------CcCCCCCCEEEEEECCCCCCCCCCCeEEEeC--CCCEEEEehHHeEE
Confidence 34567899999999876531 899999999999998776 99999973 47799999999874
No 339
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=98.74 E-value=3.7e-08 Score=80.37 Aligned_cols=66 Identities=20% Similarity=0.432 Sum_probs=56.3
Q ss_pred CccEEEEecCC--------------CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHh-cCCcee
Q psy4417 18 PCGLTVEQDAN--------------GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVK-SDGNIQ 80 (440)
Q Consensus 18 ~lGiti~~~~~--------------~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~-~~~~v~ 80 (440)
.|||++.++.+ .+++|..|.++|||+++| |+.||.|++|||.++ .+++++..+|+. .+..+.
T Consensus 20 ~lG~~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~v~ 98 (104)
T 3sfj_A 20 ILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAG-LQIGDKIMQVNGWDMTMVTHDQARKRLTKRSEEVVR 98 (104)
T ss_dssp ECSEEEEECTTSCGGGCSSCSSTTCCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHTCTTCSEEE
T ss_pred cccEEEECccccCccccccccCCCCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCEEE
Confidence 59999996432 349999999999999999 999999999999999 568899999975 456778
Q ss_pred eeec
Q psy4417 81 FTIA 84 (440)
Q Consensus 81 l~v~ 84 (440)
|.+.
T Consensus 99 l~v~ 102 (104)
T 3sfj_A 99 LLVT 102 (104)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7775
No 340
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.73 E-value=3.3e-08 Score=83.61 Aligned_cols=79 Identities=27% Similarity=0.287 Sum_probs=65.9
Q ss_pred EEEEeeCCC--CccEEEEecCC----CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccCCCHHHHHHHHHhc-CCceee
Q psy4417 9 KKILGTGLS--PCGLTVEQDAN----GNLIIARILAGSLIDKQGVLKVGDVILGVNGENVSSPEDLQIEVVKS-DGNIQF 81 (440)
Q Consensus 9 ~v~l~r~g~--~lGiti~~~~~----~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v~t~~e~~~~L~~~-~~~v~l 81 (440)
.+.+.+.+. .|||++..... .+++|..|.++|||+++|.|+.||+|++|||..+.++.++..+|+.. +..+.|
T Consensus 22 ~~~~~~~~~~~~lG~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~l~~~~g~~v~l 101 (124)
T 1wh1_A 22 EVDLYRMNSQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQNREEAVALLTSEENKNFSL 101 (124)
T ss_dssp CBCCCCSSTTCCCCEEEECCCCCSSCCCEEEEEECSSSHHHHTCCCCTTCEEEEESSCBCCSHHHHHHHHTCSSCCSCCE
T ss_pred EEEEEecCCCCcccEEEEecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCHHHHHHHHHhCCCCEEEE
Confidence 345555554 89999987543 56999999999999999999999999999999999899999999864 677888
Q ss_pred eeccCC
Q psy4417 82 TIAPQG 87 (440)
Q Consensus 82 ~v~p~~ 87 (440)
.|....
T Consensus 102 ~v~R~g 107 (124)
T 1wh1_A 102 LIARPE 107 (124)
T ss_dssp EEEECS
T ss_pred EEEECC
Confidence 887543
No 341
>2v1r_A Peroxisomal membrane protein PAS20; protein transport, translocation, transmembrane, peptide COM structural genomics, peroxisome; 2.1A {Saccharomyces cerevisiae} SCOP: b.34.2.1
Probab=98.73 E-value=4.6e-09 Score=81.87 Aligned_cols=59 Identities=29% Similarity=0.772 Sum_probs=49.1
Q ss_pred CccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCC-----CceEEEecCCCCCCccccchhHHH
Q psy4417 95 KPVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDP-----NWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 95 ~~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~-----~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
....+++|+|||.+..++. +|+|++||++.|++..+. +||.++.. ++..|+||+++++.
T Consensus 12 ~~~~~~~alydy~~~~~~~------eLs~~~Gd~i~v~~~~~~~~~~~~Ww~g~~~--~g~~G~~P~~yv~~ 75 (80)
T 2v1r_A 12 SKLEFARALYDFVPENPEM------EVALKKGDLMAILSKKDPLGRDSDWWKVRTK--NGNIGYIPYNYIEI 75 (80)
T ss_dssp GGCEEEEESSCBCCSSTTT------BCCBCTTCEEEEEEEECTTSCEEEEEEEECT--TSCEEEEEGGGEEE
T ss_pred CcCEEEEECccCCCCCCCC------EecCCCCCEEEEEECCCCCCCCCCcEEEEeC--CCCeEEEEHHHeEE
Confidence 3557899999999875432 899999999999998776 99999873 47899999999854
No 342
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.73 E-value=4.5e-08 Score=83.06 Aligned_cols=85 Identities=18% Similarity=0.241 Sum_probs=71.0
Q ss_pred CCCCCeEEEEeeCC-CCccEEEEecCC-CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccCCC--HHHHHHHHHhc-CC
Q psy4417 3 HPPHPLKKILGTGL-SPCGLTVEQDAN-GNLIIARILAGSLIDKQGVLKVGDVILGVNGENVSS--PEDLQIEVVKS-DG 77 (440)
Q Consensus 3 ~~~~~r~v~l~r~g-~~lGiti~~~~~-~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v~t--~~e~~~~L~~~-~~ 77 (440)
.+.+.+.|.+.++. .+|||++.+..+ .+++|..|.++|||+++|.|+.||.|++|||..+.+ ++++.++|+.. +.
T Consensus 5 ~~~~~~~v~l~~~~~~glG~~~~~~~~~~~~~V~~V~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~ 84 (127)
T 1b8q_A 5 IEPNVISVRLFKRKVGGLGFLVKERVSKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASE 84 (127)
T ss_dssp CCCCSEEEEEECTTTSCCSCCEEECTTSSCEEECCCSSSSSHHHHSSCCTTTCCCEETTEECSSSCHHHHHHHHHSCCSS
T ss_pred cCCceEEEEEEeCCCCcEeEEEEecCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCC
Confidence 35678889998875 799999988654 469999999999999999449999999999999954 99999999864 56
Q ss_pred ceeeeeccCC
Q psy4417 78 NIQFTIAPQG 87 (440)
Q Consensus 78 ~v~l~v~p~~ 87 (440)
.+.|.+....
T Consensus 85 ~v~l~v~R~g 94 (127)
T 1b8q_A 85 THVVLILRGP 94 (127)
T ss_dssp CEEEEEECCC
T ss_pred eEEEEEEeCC
Confidence 7888887543
No 343
>1u3o_A Huntingtin-associated protein-interacting protein; SH3, CIS-proline,, signaling protein; NMR {Rattus norvegicus}
Probab=98.73 E-value=6.7e-09 Score=80.42 Aligned_cols=54 Identities=26% Similarity=0.472 Sum_probs=46.2
Q ss_pred cccccccCCCCCCCCCCCccccceeccCCEEEEeecC--CCCceEEEecCC-CCCCccccchhH
Q psy4417 99 YMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQK--DPNWWQAQLIEP-TGPMGLVPSQEL 159 (440)
Q Consensus 99 ~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~--d~~ww~a~~~~~-~~~~G~iPs~~~ 159 (440)
.+.+++||.+..+. +|+|++||+++|++.. +++||.+|.... .++.|+||++++
T Consensus 19 ~~valydF~Ar~~~-------ELS~~kGd~vevle~~~~~peW~lvr~~~~~~~qeGlVPsnyl 75 (82)
T 1u3o_A 19 LTVVLQDFSAAHSS-------ELSIQVGQTVELLERPSERPGWCLVRTTERSPPQEGLVPSSTL 75 (82)
T ss_dssp EEECSSCBCCCSTT-------CCCBCTTCEEEESSCTTSSTTEEEEEESSSSSCEEEEEEGGGS
T ss_pred EEEEEeeecCCCCC-------eeeEcCCCEEEEEecCCCCCCEEEEEECCCCCCcEeeccccEE
Confidence 36799999999887 9999999999999965 699999998642 346799999998
No 344
>1wxu_A Peroxisomal biogenesis factor 13; SH3 domain, PEX13, protein-protein interaction, structural genomics; NMR {Mus musculus}
Probab=98.72 E-value=5.1e-09 Score=84.17 Aligned_cols=58 Identities=21% Similarity=0.415 Sum_probs=49.2
Q ss_pred CccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCC----CCceEEEecCCCCCCccccchhHHH
Q psy4417 95 KPVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKD----PNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 95 ~~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d----~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
.....++|+|||.+..++ +|+|++||+|.|++..+ .+||.++.. ....|+||++|++.
T Consensus 15 ~~~~~~~alydy~a~~~~-------eLsf~~Gd~i~v~~~~~~~~~~gWw~g~~~--~~~~G~~P~~yv~~ 76 (93)
T 1wxu_A 15 DDHVVARAEYDFVAVSDE-------EISFRAGDMLNLALKEQQPKVRGWLLASLD--GQTTGLIPANYVKI 76 (93)
T ss_dssp SCBBCEEESSCBCCSSSS-------BCCBCSSCBCEECCTTTSCSCSSCEEEESS--SSSCEEECSTTEEE
T ss_pred CCCEEEEECccCCCCCCC-------ccCcCCCCEEEEEECCCCCCCCCcEEEEeC--CcCEEEEehHHEEE
Confidence 345789999999998877 99999999999999876 699999753 23499999999975
No 345
>2e5k_A Suppressor of T-cell receptor signaling 1; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.72 E-value=6.5e-09 Score=83.70 Aligned_cols=58 Identities=21% Similarity=0.457 Sum_probs=49.4
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeec--CC--CCceEEEecCCCCCCccccchhHHH
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQ--KD--PNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~--~d--~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
...+++|+|+|.+..++ +|+|++||++.|++. .+ .+||.++... ++..|+||+++++.
T Consensus 15 ~~~~~~Alydy~~~~~~-------eLs~~~Gd~i~v~~~~~~~~~~gWw~g~~~~-~g~~G~fP~~yv~~ 76 (94)
T 2e5k_A 15 NHETLQVIYPYTPQNDD-------ELELVPGDFIFMSPMEQTSTSEGWIYGTSLT-TGCSGLLPENYITK 76 (94)
T ss_dssp CCEEEEECSCBCCSSSS-------BCCBCTTCEEEECGGGCCSTTTTEEEEEESS-SCCEEEEEGGGEEE
T ss_pred CCeEEEECCcCCCCCCC-------CcCCCCCCEEEEEECcCCCCCCCcEEEEECC-CCCEEEechHHeEE
Confidence 45688999999998877 999999999999987 44 8999999532 47899999999864
No 346
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=98.70 E-value=5.3e-08 Score=88.85 Aligned_cols=84 Identities=19% Similarity=0.282 Sum_probs=71.6
Q ss_pred CCCCCeEEEEeeCC-CCccEEEEecCC------CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccCC--CHHHHHHHHH
Q psy4417 3 HPPHPLKKILGTGL-SPCGLTVEQDAN------GNLIIARILAGSLIDKQGVLKVGDVILGVNGENVS--SPEDLQIEVV 73 (440)
Q Consensus 3 ~~~~~r~v~l~r~g-~~lGiti~~~~~------~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v~--t~~e~~~~L~ 73 (440)
...+.+.|.+.|+. .+|||++.++.+ .+++|..|.++|||+++|.|+.||.|++|||.++. ++.++..+|+
T Consensus 3 ~~~~~~~v~l~~~~~~glG~~i~~~~~~~~~~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~ 82 (196)
T 1p1d_A 3 VHTETTEVVLTADPVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLR 82 (196)
T ss_dssp CCCEEEEEEEECBTTTBCCCEEEECSSCSSSCSCSEEEEECCTTSHHHHTSCCCSSCCEEEETTBCSTTSCHHHHHHHHH
T ss_pred CccEEEEEEEEeCCCCccCEEEeCCcCCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 34567788888874 899999998732 45899999999999999999999999999999994 7899999998
Q ss_pred hc--CCceeeeeccC
Q psy4417 74 KS--DGNIQFTIAPQ 86 (440)
Q Consensus 74 ~~--~~~v~l~v~p~ 86 (440)
.. +..+.|++...
T Consensus 83 ~~~~g~~v~l~v~R~ 97 (196)
T 1p1d_A 83 DSSITSKVTLEIEFD 97 (196)
T ss_dssp TCCSSSEEEEEEEEC
T ss_pred hCCCCCeEEEEEEec
Confidence 76 67888888654
No 347
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=98.70 E-value=1.8e-08 Score=93.71 Aligned_cols=79 Identities=19% Similarity=0.263 Sum_probs=69.3
Q ss_pred CCCeEEEEeeCCCCccEEEEecCC-CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccCC--CHHHHHHHHHhcCCce-e
Q psy4417 5 PHPLKKILGTGLSPCGLTVEQDAN-GNLIIARILAGSLIDKQGVLKVGDVILGVNGENVS--SPEDLQIEVVKSDGNI-Q 80 (440)
Q Consensus 5 ~~~r~v~l~r~g~~lGiti~~~~~-~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v~--t~~e~~~~L~~~~~~v-~ 80 (440)
..++.|.+.+...+|||++.++.+ .+++|..|.++|||+++| |+.||+|++|||..+. +++++..+|+..+..+ .
T Consensus 8 ~~~r~v~l~k~~~glG~~l~~~~~~~gv~V~~V~~gSpA~~aG-L~~GD~Il~VNG~~V~~~s~~dl~~~l~~~g~~v~~ 86 (216)
T 2krg_A 8 LRPRLCTMKKGPSGYGFNLHSDKSKPGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETKL 86 (216)
T ss_dssp CCCEEEEEECCSSSSCEEECCCSSSCSCBEEEECTTSHHHHHT-CCTTCBCCEETTEECTTCCTHHHHHHHHHHCSEEEE
T ss_pred cceEEEEEEeCCCCceEEEEecCCCCCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcCCeEEE
Confidence 567889999999999999987654 469999999999999999 9999999999999995 9999999998777777 6
Q ss_pred eeec
Q psy4417 81 FTIA 84 (440)
Q Consensus 81 l~v~ 84 (440)
|.|.
T Consensus 87 l~V~ 90 (216)
T 2krg_A 87 LVVD 90 (216)
T ss_dssp EECC
T ss_pred EEEE
Confidence 6664
No 348
>4d8k_A Tyrosine-protein kinase LCK; protein kinases, SH2 domain, SH3 domain, structural genomics center for structural genomics, JCSG; 2.36A {Homo sapiens} PDB: 1lck_A* 1x27_A*
Probab=98.70 E-value=7.6e-09 Score=92.98 Aligned_cols=58 Identities=33% Similarity=0.687 Sum_probs=49.5
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHHh
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEER 162 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~r 162 (440)
...+++|+|||.+..+. +|+|++||++.|++. +++||+++... ++..|+||++++.+.
T Consensus 11 ~~~~~~alydy~~~~~~-------eLs~~~Gd~i~v~~~-~~~Ww~~~~~~-~g~~G~vP~~yv~~~ 68 (175)
T 4d8k_A 11 QDNLVIALHSYEPSHDG-------DLGFEKGEQLRILEQ-SGEWWKAQSLT-TGQEGFIPFNFVAKA 68 (175)
T ss_dssp --CEEEESSCBCCCSSS-------BCCBCTTCEEEEEEC-CSSEEEEEETT-TCCEEEEEGGGEEET
T ss_pred CCcEEEEccCcCCcCCc-------ccccccCCEEEEEcc-CCCEEEEEECC-CCceeeecccccccc
Confidence 44689999999998887 999999999999998 78999999853 367999999998753
No 349
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=98.67 E-value=7.3e-08 Score=87.28 Aligned_cols=79 Identities=22% Similarity=0.368 Sum_probs=67.4
Q ss_pred eEEEEeeCCCCccEEEEecCC-------CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccCC--CHHHHHHHHHhcCCc
Q psy4417 8 LKKILGTGLSPCGLTVEQDAN-------GNLIIARILAGSLIDKQGVLKVGDVILGVNGENVS--SPEDLQIEVVKSDGN 78 (440)
Q Consensus 8 r~v~l~r~g~~lGiti~~~~~-------~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v~--t~~e~~~~L~~~~~~ 78 (440)
..+.+.+...++|+++.++.. .+++|..|.++|+|+++|.|+.||.|++|||+++. +++++..+|+..++.
T Consensus 102 ~~v~l~~~~~~lG~~~~~~~~~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~ 181 (196)
T 3gsl_A 102 MEIKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKNTYDV 181 (196)
T ss_dssp EEEEEEEBTTBSCEEEEESBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCBHHHHHHHHHSCCEE
T ss_pred EEEEEecCCCCceEEEEccCCCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCCcCCCCCHHHHHHHHHcCCCe
Confidence 345666777789999987543 35899999999999999999999999999999994 499999999988888
Q ss_pred eeeeeccC
Q psy4417 79 IQFTIAPQ 86 (440)
Q Consensus 79 v~l~v~p~ 86 (440)
+.|.|...
T Consensus 182 v~l~v~R~ 189 (196)
T 3gsl_A 182 VYLKVAKP 189 (196)
T ss_dssp EEEEEEEE
T ss_pred EEEEEeCC
Confidence 99888654
No 350
>1k1z_A VAV; SH3, proto-oncogene, signaling protein; NMR {Mus musculus} SCOP: b.34.2.1
Probab=98.67 E-value=1.7e-08 Score=78.23 Aligned_cols=60 Identities=20% Similarity=0.438 Sum_probs=45.9
Q ss_pred cccccccccCCCCCCCCCCCccccceeccCCEEEEeecC-CCCceEEEecCCCCCCccccchhHHH
Q psy4417 97 VCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQK-DPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 97 ~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~-d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
...++++++|.+.... .+.+|+|++||+++|+++. +.+||.++... ++..|+||++|++.
T Consensus 15 ~~~~~a~~~~~~~~~~----~~~eLsf~~Gd~i~v~~~~~~~gWw~g~~~~-~g~~G~fP~nyV~~ 75 (78)
T 1k1z_A 15 MEVFQEYYGIPPPPGA----FGGFLRLNPGDIVELTKAEAEHNWWEGRNTA-TNEVGWFPCNRVHP 75 (78)
T ss_dssp EEECSCBSSCSCCSSS----SCCCCCBCTTCEEEEEECCSSCSCEEEEETT-TTEEEEECSTTEEE
T ss_pred EEEEEECCCCCCCCCC----CCCccCCCCCCEEEEEEcCCCCCeEEEEECC-CCCEEEEehHHeEE
Confidence 3456777888774310 0229999999999999985 99999999642 47799999999854
No 351
>1mv3_A MYC box dependent interacting protein 1; tumor suppressor, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=98.67 E-value=7.2e-09 Score=95.60 Aligned_cols=58 Identities=16% Similarity=0.324 Sum_probs=50.2
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEee-----cCCCCceEEEecCC-------CCCCccccchhHH
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILN-----QKDPNWWQAQLIEP-------TGPMGLVPSQELE 160 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~-----~~d~~ww~a~~~~~-------~~~~G~iPs~~~~ 160 (440)
...+++|+|+|.+..++ +|+|++||||.|+. ..+.+||.++.... ++..|+||++|++
T Consensus 141 ~~~~~rALYdY~a~~~d-------ELSf~~GDiI~Vl~~~~~~~~ddgWw~G~~~~t~~~~~d~~G~~G~FPsnYVe 210 (213)
T 1mv3_A 141 FMFKVQAQHDYTATDTD-------ELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKKLEKCRGVFPENFTE 210 (213)
T ss_dssp CCEEEEESSCBCCCSTT-------CCCBCSSCEEEECCCSCGGGSCTTEEEEEEHHHHHTGGGGGGTCEEEESTTEE
T ss_pred cceEEEECCCcCCCCCC-------cCCcCCCCEEEEeecCCCCccCCCeeEEEeCCcccccccCCCCEEEecHHHeE
Confidence 44579999999999887 99999999999999 78999999997421 3789999999975
No 352
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=98.67 E-value=6.2e-08 Score=88.09 Aligned_cols=67 Identities=15% Similarity=0.242 Sum_probs=60.2
Q ss_pred CCccEEEEecCC----------CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcCCceeeeec
Q psy4417 17 SPCGLTVEQDAN----------GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSDGNIQFTIA 84 (440)
Q Consensus 17 ~~lGiti~~~~~----------~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~~~v~l~v~ 84 (440)
.+|||+|.|+.+ .+++|..|.++|||++ | |+.||.|++|||.++ .++.++..+++..++.+.|.|.
T Consensus 2 ~g~Gf~i~gg~~~~~~~~~~~~~g~~V~~v~~~spA~~-g-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~ 79 (195)
T 2qbw_A 2 PELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIIV 79 (195)
T ss_dssp CCSSEEEEECTTSCCCSSCTTCCSEEEEEECTTSTTTT-T-CCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEEEEEE
T ss_pred CcccEEEECCcCCCCCccccCCCCEEEEEECCCChHHh-C-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEE
Confidence 579999999742 4699999999999999 8 999999999999999 5689999999988889999887
Q ss_pred c
Q psy4417 85 P 85 (440)
Q Consensus 85 p 85 (440)
.
T Consensus 80 r 80 (195)
T 2qbw_A 80 R 80 (195)
T ss_dssp E
T ss_pred E
Confidence 6
No 353
>1lvg_A Guanylate kinase, GMP kinase; transferase; HET: ADP 5GP; 2.10A {Mus musculus} SCOP: c.37.1.1
Probab=98.66 E-value=4.3e-08 Score=89.62 Aligned_cols=98 Identities=38% Similarity=0.582 Sum_probs=78.6
Q ss_pred cCC-eEEeecCcchhhhhhhhhccccccccCCC-ceEEecCCCccceeecCCCcccchhhccCccccccCHHHHHHHHHc
Q psy4417 260 SGK-ICVLDCSPVGLFTFLLGLIEGTVTAKLIP-YTYSIPICSWSSFFASDTTRPMRELEENGQNYWFTSREVMERDIQD 337 (440)
Q Consensus 260 ~g~-~~il~~~~~g~~~l~~~l~~~~~~~~~~p-~~i~i~~~~~~~f~~~~ttr~~~~~e~~g~~y~f~s~~~f~~~~~~ 337 (440)
.|+ ++|++.+..|..+|++.|..- +| ..- +..++|||+++.++.+|.+|+|++.++|.+++..
T Consensus 3 ~g~~i~lvGpsGaGKSTLl~~L~~~------~~~~~~---------~~v~~ttr~~~~g~~~g~~~~~~~~~~~~~~i~~ 67 (198)
T 1lvg_A 3 GPRPVVLSGPSGAGKSTLLKKLFQE------HSSIFG---------FSVSHTTRNPRPGEEDGKDYYFVTREMMQRDIAA 67 (198)
T ss_dssp --CCEEEECCTTSSHHHHHHHHHHH------HTTTEE---------ECCCEECSCCCTTCCBTTTBEECCHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHHhh------Cchhce---------eeeeeeccCCCCcccCCceEEEccHHHHHHHHHc
Confidence 444 556666666677776665422 12 222 6678999999999999999999999999999999
Q ss_pred CceeeEEEEcCccccccHHHHHHHHhcCCeeEecC
Q psy4417 338 HKFLEYGEHNGHLYGTHLDSIREVILSGKICVLDC 372 (440)
Q Consensus 338 ~~fle~~~~~~~~yGt~~~~i~~~~~~~~~~i~~~ 372 (440)
+.|++++++.++.||++.+.++++++.++.++++.
T Consensus 68 ~~~l~~~~~~~n~~g~~~~~i~~~~~~~~~~~~~~ 102 (198)
T 1lvg_A 68 GDFIEHAEFSGNLYGTSKEAVRAVQAMNRICVLDV 102 (198)
T ss_dssp TCEEEEEEETTEEEEEEHHHHHHHHHTTCEEEEEC
T ss_pred CCCEeeeeecCccCCCCHHHHHHHHHcCCcEEEEC
Confidence 99999999999999999999999999888877654
No 354
>1znw_A Guanylate kinase, GMP kinase; ATP:GMP-phosphotransferase, TR; 2.10A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1znx_A* 1zny_A* 1znz_A* 1s4q_A 1z8f_A
Probab=98.66 E-value=1.3e-07 Score=86.70 Aligned_cols=118 Identities=20% Similarity=0.231 Sum_probs=86.2
Q ss_pred CccccchhHHHhhhcccCCCcccccccccccccccccccccccccccCcccccCCCCCCCCCccCCCcceecCHHHHHHh
Q psy4417 151 MGLVPSQELEERRKAFVPPEADYVHKIGICGTRYIKQYNTLQYNSTLMSRSFPDTTRPMRELEENGQNYWFTSREVMERD 230 (440)
Q Consensus 151 ~G~iPs~~~~~rr~~~~~~~~~~~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~ttr~~r~~e~~g~~y~fvs~~~f~~~ 230 (440)
+-.++++...+.-..+.+.|++|+||+|+++.+....+ .+. ....+++|.++.++..|..|.|.+...|..+
T Consensus 8 ~~~~~~~~~i~~Gei~~l~GpnGsGKSTLl~~l~gl~~-~i~-------~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 79 (207)
T 1znw_A 8 TKPTARGQPAAVGRVVVLSGPSAVGKSTVVRCLRERIP-NLH-------FSVSATTRAPRPGEVDGVDYHFIDPTRFQQL 79 (207)
T ss_dssp -----------CCCEEEEECSTTSSHHHHHHHHHHHST-TCE-------ECCCEESSCCCTTCCBTTTBEECCHHHHHHH
T ss_pred CCcCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHhhCC-ceE-------EcccccccCCcccccCCCeeEecCHHHHHHH
Confidence 34445553334445566789999999998775433221 232 2467888888888888999999999999999
Q ss_pred hhcCCeeEEEEEcC--CccccchhhHHHHHhcCCeEEeecCcchhhhh
Q psy4417 231 IQDHKFLEYGEHNG--HLYGTHLDSIREVILSGKICVLDCSPVGLFTF 276 (440)
Q Consensus 231 i~~~~fle~~~~~g--~~yg~~~~~i~~v~~~g~~~il~~~~~g~~~l 276 (440)
...+.|+++..+.+ .+||++.+.+++.++.+..++++++..|+..+
T Consensus 80 ~~~~~l~~~~~~~~n~~~~g~~~~~~~~~~~~~~~~~~~l~~~gl~~~ 127 (207)
T 1znw_A 80 IDQGELLEWAEIHGGLHRSGTLAQPVRAAAATGVPVLIEVDLAGARAI 127 (207)
T ss_dssp HHTTCEEEEEEEGGGTEEEEEEHHHHHHHHHHTCCEEEECCHHHHHHH
T ss_pred HhcCCceeehhhcCchhhcCCcHHHHHHHHHcCCeEEEEeCHHHHHHH
Confidence 88889999988887 78999988999999999888888888888666
No 355
>2kbt_A Chimera of proto-oncogene VAV, linker, immunoglobulin G-binding protein G; sortase, protein ligation, intein, inset, solubility enhancement; NMR {Mus musculus}
Probab=98.65 E-value=1.1e-08 Score=88.85 Aligned_cols=56 Identities=29% Similarity=0.686 Sum_probs=49.6
Q ss_pred cccccccccCCCCCCCCCCCccccceeccCCEEEEeec-CCCCceEEEecCCCCCCccccchhHHHh
Q psy4417 97 VCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQ-KDPNWWQAQLIEPTGPMGLVPSQELEER 162 (440)
Q Consensus 97 ~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~-~d~~ww~a~~~~~~~~~G~iPs~~~~~r 162 (440)
..+++|+|||.+..++ +|+|++||++.|+++ .+.+||.++. ++..|+||++|+...
T Consensus 5 ~~~~~Alydy~a~~~~-------ELsf~~Gd~i~Vl~~~~~~gWw~g~~---~g~~G~fP~~yv~~~ 61 (142)
T 2kbt_A 5 FGTAKARYDFCARDRS-------ELSLKEGDIIKILNKKGQQGWWRGEI---YGRIGWFPSNYVEED 61 (142)
T ss_dssp CCEEEESSCCCCSSSS-------BCCCCTTCEEEEEECCCSSSEEEEEE---TTEEEEEETTSEEES
T ss_pred CeEEEECCccCCCCCC-------cCCCCCCCEEEEEEecCCCCeEEEEE---CCeeEEechHHEEEc
Confidence 3578999999998877 999999999999998 4899999997 478999999999764
No 356
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=98.64 E-value=9.4e-08 Score=73.93 Aligned_cols=67 Identities=24% Similarity=0.440 Sum_probs=58.4
Q ss_pred CCCCccEEEEecCCCcEEEEEEcCCChhhhcCCCCCCCEEEeECCccCC--CHHHHHHHHHhcCCceeeeecc
Q psy4417 15 GLSPCGLTVEQDANGNLIIARILAGSLIDKQGVLKVGDVILGVNGENVS--SPEDLQIEVVKSDGNIQFTIAP 85 (440)
Q Consensus 15 ~g~~lGiti~~~~~~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v~--t~~e~~~~L~~~~~~v~l~v~p 85 (440)
....+|+.+.. +++|..|.++|||+++|.|+.||.|++|||.++. ++.++..+|+..++.+.+.+..
T Consensus 11 ~~~~~g~~~~~----gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~R 79 (81)
T 2rcz_A 11 KNEEYGLRLAS----HIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKGKLKMVVQR 79 (81)
T ss_dssp TTCCCCEEEEE----EEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHHTSTTEEEEEEEC
T ss_pred CCCCCCEEEeC----CEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHCCCCeEEEEEEe
Confidence 35688998863 5899999999999999999999999999999996 9999999999777777777753
No 357
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=98.63 E-value=1e-07 Score=87.05 Aligned_cols=80 Identities=20% Similarity=0.260 Sum_probs=67.8
Q ss_pred CCeEEEEee-CCCCccEEEEecCC--CcEEEEEEcCCChhhhc-CCCCCCCEEEeECCccC--CCHHHHHHHHHhcCCce
Q psy4417 6 HPLKKILGT-GLSPCGLTVEQDAN--GNLIIARILAGSLIDKQ-GVLKVGDVILGVNGENV--SSPEDLQIEVVKSDGNI 79 (440)
Q Consensus 6 ~~r~v~l~r-~g~~lGiti~~~~~--~~i~V~~V~~gs~A~~~-G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~~~v 79 (440)
.++.|.+.+ .+.+|||++.++.+ .+++|..|.++|||+++ | |+.||.|++|||.++ .++.++..+++..++.+
T Consensus 7 ~~~~v~l~~~~~~~lG~~i~~~~~~~~~~~V~~v~~~spA~~agg-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v 85 (200)
T 2qt5_A 7 GSTVVELMKKEGTTLGLTVSGGIDKDGKPRVSNLRQGGIAARSDQ-LDVGDYIKAVNGINLAKFRHDEIISLLKNVGERV 85 (200)
T ss_dssp EEEEEEEECCTTCCCCEEEECCTTSSSCSEEEEECTTSHHHHTTS-CCTTCEEEEETTEECTTSCHHHHHHHHHTCCSEE
T ss_pred CCEEEEEEeCCCCCCCEEEecccCCCCCeEEEEECCCChHHhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeE
Confidence 345667765 57799999998654 45899999999999999 6 999999999999999 56799999998888889
Q ss_pred eeeeccC
Q psy4417 80 QFTIAPQ 86 (440)
Q Consensus 80 ~l~v~p~ 86 (440)
.|.+...
T Consensus 86 ~l~v~R~ 92 (200)
T 2qt5_A 86 VLEVEYE 92 (200)
T ss_dssp EEEEEEE
T ss_pred EEEEecc
Confidence 9988653
No 358
>3i5r_A Phosphatidylinositol 3-kinase regulatory subunit alpha; SH3 domain, peptide complex, alternative splicing, disease mutation, HOST-virus interaction, phosphoprotein, polymorphism; 1.70A {Homo sapiens} SCOP: b.34.2.1 PDB: 3i5s_A 1pht_A 1pnj_A 2pni_A 1pks_A 1pkt_A
Probab=98.61 E-value=7.1e-09 Score=81.46 Aligned_cols=58 Identities=22% Similarity=0.403 Sum_probs=47.8
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeec---------------CCCCceEEEecCCCCCCccccchhHH
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQ---------------KDPNWWQAQLIEPTGPMGLVPSQELE 160 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~---------------~d~~ww~a~~~~~~~~~G~iPs~~~~ 160 (440)
....++|+|+|.+..++ +|+|++||++.|++. .+.+||.++... ++..|+||++|+.
T Consensus 4 ~~~~~~Alydy~~~~~~-------eLs~~~Gd~I~V~~~~~~~~~~~~~~e~~~~~~gW~~g~~~~-~g~~G~fP~~yV~ 75 (83)
T 3i5r_A 4 EGYQYRALYDYKKEREE-------DIDLHLGDILTVNKGSLVALGFSDGQEARPEEIGWLNGYNET-TGERGDFPGTYVE 75 (83)
T ss_dssp EEEEEEECSCBCCCSTT-------BCCBCTTCEEEEEHHHHHHHTCTTTGGGCHHHHCEEEEEETT-TTEEEEEEGGGEE
T ss_pred CCcEEEEccccCCCCCC-------ccccCCCCEEEEeeccccccccccccccCCCCCccEEEEeCC-CCCEEEEehHHEE
Confidence 34678999999998777 999999999999953 344899998753 4789999999986
Q ss_pred H
Q psy4417 161 E 161 (440)
Q Consensus 161 ~ 161 (440)
.
T Consensus 76 ~ 76 (83)
T 3i5r_A 76 Y 76 (83)
T ss_dssp E
T ss_pred E
Confidence 4
No 359
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=98.60 E-value=2.1e-07 Score=82.61 Aligned_cols=80 Identities=24% Similarity=0.372 Sum_probs=64.1
Q ss_pred CCCCeEEEEeeCC-CCccEEEEecCCCcEEEEEEcCCChhhhcCCCCCCCEEEeECCccCCC--HHHHHHHHHhc-CCce
Q psy4417 4 PPHPLKKILGTGL-SPCGLTVEQDANGNLIIARILAGSLIDKQGVLKVGDVILGVNGENVSS--PEDLQIEVVKS-DGNI 79 (440)
Q Consensus 4 ~~~~r~v~l~r~g-~~lGiti~~~~~~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v~t--~~e~~~~L~~~-~~~v 79 (440)
.+++|.|.+.|.. ..||+++... +.+++|..|.++|||+++| |+.||.|++|||.++.+ .+.+..+++.. +..+
T Consensus 2 a~~~r~v~l~k~~~~~lG~~~~~~-~~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~~~~~v 79 (166)
T 1w9e_A 2 AMDPREVILCKDQDGKIGLRLKSI-DNGIFVQLVQANSPASLVG-LRFGDQVLQINGENCAGWSSDKAHKVLKQAFGEKI 79 (166)
T ss_dssp -CCCEEEEEECCTTSCCSEEEEEE-TTEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHHCCSSEE
T ss_pred CCCCEEEEEEeCCCCcEeEEEEeC-CCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCCCCEE
Confidence 3578899999854 5899999873 4679999999999999999 99999999999999943 33455666654 4588
Q ss_pred eeeecc
Q psy4417 80 QFTIAP 85 (440)
Q Consensus 80 ~l~v~p 85 (440)
.|++..
T Consensus 80 ~l~vr~ 85 (166)
T 1w9e_A 80 TMTIRD 85 (166)
T ss_dssp EEEEEC
T ss_pred EEEEEc
Confidence 888843
No 360
>3o5z_A Phosphatidylinositol 3-kinase regulatory subunit; SRC homology 3 domain, protein binding; 2.01A {Homo sapiens} SCOP: b.34.2.0 PDB: 2kt1_A
Probab=98.57 E-value=2.1e-08 Score=80.06 Aligned_cols=58 Identities=19% Similarity=0.284 Sum_probs=47.4
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeec---------------CCCCceEEEecCCCCCCccccchhHH
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQ---------------KDPNWWQAQLIEPTGPMGLVPSQELE 160 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~---------------~d~~ww~a~~~~~~~~~G~iPs~~~~ 160 (440)
....++|+|+|.+..++ +|+|++||++.|++. ++.+||.++... ++..|+||++|++
T Consensus 10 ~~~~~~Alydy~a~~~~-------ELsf~~GD~I~V~~~~~~~l~~~~~~~~~~~~~gW~~G~~~~-~g~~G~fP~nyVe 81 (90)
T 3o5z_A 10 EGFQYRALYPFRRERPE-------DLELLPGDVLVVSRAALQALGVAEGGERCPQSVGWMPGLNER-TRQRGDFPGTYVE 81 (90)
T ss_dssp SEEEEEECSCBCCCSTT-------BCCBCTTCEEEEEHHHHHHTTCCTTGGGCHHHHCEEEEEETT-TCCEEEEEGGGEE
T ss_pred CCcEEEEeeeECCCCCC-------ccCCcCCCEEEEEeccccccccccccccCCCCCCceEEEeCC-CCCEEEeehHHEE
Confidence 45678999999998877 999999999999842 233899998643 4789999999986
Q ss_pred H
Q psy4417 161 E 161 (440)
Q Consensus 161 ~ 161 (440)
.
T Consensus 82 ~ 82 (90)
T 3o5z_A 82 F 82 (90)
T ss_dssp E
T ss_pred E
Confidence 4
No 361
>1gcq_C VAV proto-oncogene; SH3 domain, protein-protein complex, GRB2,VAV, signaling protein/signaling protein complex; 1.68A {Mus musculus} SCOP: b.34.2.1 PDB: 1gcp_A
Probab=98.57 E-value=2.6e-08 Score=75.51 Aligned_cols=41 Identities=27% Similarity=0.633 Sum_probs=35.9
Q ss_pred cceeccCCEEEEeec-CCCCceEEEecCCCCCCccccchhHHH
Q psy4417 120 GLAFNHGDILQILNQ-KDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 120 ~L~f~~GdIl~V~~~-~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
+|+|++||+++|++. .+.+||.++... ++..|+||+++++.
T Consensus 26 eLsf~~Gd~i~v~~~~~~~~Ww~g~~~~-~g~~G~fP~~yv~~ 67 (70)
T 1gcq_C 26 FLRLNPGDIVELTKAEAEHNWWEGRNTA-TNEVGWFPCNRVHP 67 (70)
T ss_dssp BCCBCTTCEEEEEECCTTCSEEEEEETT-TTEEEEEEGGGEEE
T ss_pred cCCcCCCCEEEEEeCCCCCCCeEEEeCC-CCCEeEeehHHeEE
Confidence 899999999999998 689999998643 47799999999854
No 362
>2dvj_A V-CRK sarcoma virus CT10 oncogene homolog, isoform A; SH3, SH2, signal transduction, adapter molecule, signaling protein; HET: PTR; NMR {Homo sapiens} PDB: 2eyy_A 2eyv_A 2eyw_A
Probab=98.56 E-value=4e-08 Score=92.20 Aligned_cols=61 Identities=31% Similarity=0.730 Sum_probs=53.0
Q ss_pred CccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHHhhh
Q psy4417 95 KPVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEERRK 164 (440)
Q Consensus 95 ~~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~rr~ 164 (440)
....+++|+|||.+..++ +|+|++||++.|+++.|.+||+++.. ++..|+||++|+++...
T Consensus 134 ~~~~~~~al~dy~~~~~~-------eLsf~~Gd~i~v~~~~~~~Ww~g~~~--~g~~G~~P~~yv~~~~~ 194 (230)
T 2dvj_A 134 EEAEYVRALFDFNGNDEE-------DLPFKKGDILRIRDKPEEQWWNAEDS--EGKRGMIPVPYVEKYRP 194 (230)
T ss_dssp CCCCCCBCCSCCCCSSSS-------SCCCCSSCBCCCCBCSCSSEEEEECT--TSCEEEEEGGGSCCCCS
T ss_pred ccceeEEEeeeecCCCCC-------CccCcCCCEEEEEEccCCCcEEEEeC--CCCEEEEehHHeEEcCC
Confidence 345689999999998877 99999999999999999999999843 47899999999987543
No 363
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=98.55 E-value=2e-07 Score=85.43 Aligned_cols=70 Identities=17% Similarity=0.271 Sum_probs=61.3
Q ss_pred CCCccEEEEecCCCcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcCCceeeeeccC
Q psy4417 16 LSPCGLTVEQDANGNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSDGNIQFTIAPQ 86 (440)
Q Consensus 16 g~~lGiti~~~~~~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~~~v~l~v~p~ 86 (440)
+..|||++... ..+++|..|.++|+|+++|.|+.||+|++|||+++ .+++++..+|++.++.+.|.|...
T Consensus 124 ~~~lG~~~~~~-~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~L~V~R~ 195 (206)
T 3r0h_A 124 GKELGLSLSPN-EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGANGKVSMEVTRP 195 (206)
T ss_dssp TCCCCEEEEEC-SSCEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEEEE
T ss_pred CCccCeEEEcC-CceEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeC
Confidence 46899999863 35699999999999999998999999999999999 478999999998888998888653
No 364
>1gri_A Growth factor bound protein 2; SH2, SH3, signal transduction adaptor; 3.10A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 d.93.1.1 PDB: 1aze_A 2a37_A 2azv_A 2a36_A 2azs_A
Probab=98.55 E-value=4.4e-08 Score=90.81 Aligned_cols=57 Identities=33% Similarity=0.890 Sum_probs=51.1
Q ss_pred CccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 95 KPVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 95 ~~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
....+++|+|||.+..++ +|+|++||++.|++..+++||.++. ++..|+||+++++.
T Consensus 156 ~~~~~~~al~~y~~~~~~-------eL~~~~Gd~i~v~~~~~~~W~~g~~---~g~~G~~P~~yv~~ 212 (217)
T 1gri_A 156 QQPTYVQALFDFDPQEDG-------ELGFRRGDFIHVMDNSDPNWWKGAC---HGQTGMFPRNYVTP 212 (217)
T ss_dssp CCCCEEEESSCCCCSSTT-------BCCCCTTCEEEEEECCSSSEEEEEC---SSCEEEEEGGGEEE
T ss_pred CCceEEEecCCccCCCCC-------cCCCCCCCEEEEEEeCCCCeEEEEE---CCeEEEEeHHHeEE
Confidence 356789999999998877 9999999999999999999999997 57899999999854
No 365
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.54 E-value=3.5e-07 Score=77.60 Aligned_cols=80 Identities=29% Similarity=0.331 Sum_probs=62.1
Q ss_pred CCeEEEEeeC-CCCccEEEEecCC--CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcCCcee
Q psy4417 6 HPLKKILGTG-LSPCGLTVEQDAN--GNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSDGNIQ 80 (440)
Q Consensus 6 ~~r~v~l~r~-g~~lGiti~~~~~--~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~~~v~ 80 (440)
+.+.+.+... ...|||++.++.. .+++|..|.++|||+++| |+.||.|++|||.++ .++.++...++. ++.+.
T Consensus 20 ~~~~v~v~~~~~~~lG~~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~~~~-~~~v~ 97 (128)
T 1uf1_A 20 DEKKVNLVLGDGRSLGLTIRGGAEYGLGIYITGVDPGSEAEGSG-LKVGDQILEVNGRSFLNILHDEAVRLLKS-SRHLI 97 (128)
T ss_dssp SEEEEEEECCSSCCCCEEEECCTTTTCCCEEEEECTTCHHHHHT-CCTTCEEEEETTEECSSCCHHHHHHHHTT-CSEEE
T ss_pred cEEEEEEEECCCCccCEEEECcccCCCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHhc-CCeEE
Confidence 4445555543 3689999987543 369999999999999999 999999999999999 346677777765 46888
Q ss_pred eeeccCC
Q psy4417 81 FTIAPQG 87 (440)
Q Consensus 81 l~v~p~~ 87 (440)
|.|....
T Consensus 98 l~v~R~g 104 (128)
T 1uf1_A 98 LTVKDVG 104 (128)
T ss_dssp EEEECCS
T ss_pred EEEEECC
Confidence 8887643
No 366
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=98.52 E-value=3.1e-07 Score=83.90 Aligned_cols=79 Identities=18% Similarity=0.294 Sum_probs=67.4
Q ss_pred eEEEEeeCCCCccEEEEecCC------CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccCC--CHHHHHHHHHhcCCce
Q psy4417 8 LKKILGTGLSPCGLTVEQDAN------GNLIIARILAGSLIDKQGVLKVGDVILGVNGENVS--SPEDLQIEVVKSDGNI 79 (440)
Q Consensus 8 r~v~l~r~g~~lGiti~~~~~------~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v~--t~~e~~~~L~~~~~~v 79 (440)
..+.+.+....||+++.++.. .+++|..|.++|+|+++|.|+.||.|++|||.++. +++++..+|+..++.+
T Consensus 108 ~~v~l~~~~~~lG~~l~~g~~~~~~~~~g~~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v 187 (200)
T 2qt5_A 108 VEVTLHKEGNTFGFVIRGGAHDDRNKSRPVVITCVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQCGQEA 187 (200)
T ss_dssp EEEEEECBTTBCSEEEEEECCSSTTTCEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTTCSEE
T ss_pred EEEEEecCCCCeEEEEECCCCCCccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 445555677889999987542 35899999999999999999999999999999996 9999999999877888
Q ss_pred eeeeccC
Q psy4417 80 QFTIAPQ 86 (440)
Q Consensus 80 ~l~v~p~ 86 (440)
.|.+...
T Consensus 188 ~l~v~R~ 194 (200)
T 2qt5_A 188 TLLIEYD 194 (200)
T ss_dssp EEEEEEE
T ss_pred EEEEEEC
Confidence 8888653
No 367
>1g2b_A Spectrin alpha chain; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton, metal binding protein; 1.12A {Gallus gallus} SCOP: b.34.2.1 PDB: 1tud_A
Probab=98.47 E-value=1.7e-07 Score=69.21 Aligned_cols=42 Identities=26% Similarity=0.679 Sum_probs=38.2
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEe
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQL 144 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~ 144 (440)
...+++|+|||.+..++ +|+|++||++.|+++.+++||+++.
T Consensus 20 ~~~~~~alydy~a~~~~-------eLsf~~Gd~i~v~~~~~~~Ww~g~~ 61 (62)
T 1g2b_A 20 GKELVLALYDYQEKSPR-------EVTMKKGDILTLLNSTNKDWWKVEV 61 (62)
T ss_dssp SSCEEEECSCBCCSSTT-------BCCBCTTCEEEEEECCSSSEEEEEE
T ss_pred CceEEEEeeeECCCCCC-------ccCCCCCCEEEEEEecCCCEEEEEe
Confidence 34678999999998877 9999999999999999999999985
No 368
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=98.44 E-value=9.1e-08 Score=96.73 Aligned_cols=84 Identities=19% Similarity=0.268 Sum_probs=68.5
Q ss_pred CCCCeEEEEeeC-CCCccEEEEecCCC----cEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhc-
Q psy4417 4 PPHPLKKILGTG-LSPCGLTVEQDANG----NLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKS- 75 (440)
Q Consensus 4 ~~~~r~v~l~r~-g~~lGiti~~~~~~----~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~- 75 (440)
+.+.+.|.+.|. |++|||+|.+...+ +++|..|.+||||+++|.|+.||+|++|||.++ .+++++..+|+..
T Consensus 202 ~~~~~~V~i~k~~ge~lG~~i~~~~~g~~~~g~~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~~ 281 (388)
T 3suz_A 202 SENCKELQLEKHKGEILGVVVVESGWGSILPTVILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLATCQGIIKGLK 281 (388)
T ss_dssp SSCCEEEEECCCSSCCCCCCCBCC---CCSCCCBCCCCCCSSHHHHTCCCCTTCEEEEETTEECSSCCSTTHHHHTTTCT
T ss_pred cccceEEEEECCCCCceeEEEEecCCCCcCCCEEEEeeCCCCHHHHcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhcc
Confidence 455678888876 78999999875433 489999999999999999999999999999999 6779999999875
Q ss_pred -CCceeeeeccCC
Q psy4417 76 -DGNIQFTIAPQG 87 (440)
Q Consensus 76 -~~~v~l~v~p~~ 87 (440)
+..+.|++...+
T Consensus 282 ~~~~v~l~v~r~~ 294 (388)
T 3suz_A 282 NQTQVKLNIVSCP 294 (388)
T ss_dssp TCSCEEEEEEECC
T ss_pred CCCcccccccccc
Confidence 345888887643
No 369
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.43 E-value=8.5e-07 Score=74.34 Aligned_cols=80 Identities=19% Similarity=0.272 Sum_probs=60.9
Q ss_pred CeEEEEeeC----CCCccEEEEecC-----CCcEEEEEEcC--CChhhhcCCCCCCCEEEeECCccCCCH--HHHHHHHH
Q psy4417 7 PLKKILGTG----LSPCGLTVEQDA-----NGNLIIARILA--GSLIDKQGVLKVGDVILGVNGENVSSP--EDLQIEVV 73 (440)
Q Consensus 7 ~r~v~l~r~----g~~lGiti~~~~-----~~~i~V~~V~~--gs~A~~~G~L~~GD~Il~VNg~~v~t~--~e~~~~L~ 73 (440)
+..|.+.+. ...+||.+.... ..+++|..|.+ ++||+++| |+.||.|++|||..+.+. +++..+|+
T Consensus 13 ~~~v~l~~~~~~~~g~~G~~v~l~~~~~~~~~gv~V~~V~~~~~spA~~aG-L~~GD~Il~Vng~~v~~~~~~dl~~~l~ 91 (118)
T 2yub_A 13 PYSVTLISMPATTECRRGFSVTVESASSNYATTVQVKEVNRMHISPNNRNA-IHPGDRILEINGTPVRTLRVEEVEDAIK 91 (118)
T ss_dssp CCEEEEEEECSCSSSSCSSEEEEECTTSSSCCEEEEEECCTTTSCTTHHHH-CCTTCCEEEESSSBTTTSCHHHHHHHHH
T ss_pred CceeEEeccCCccCCCceEEEEeccccccCCCcEEEEEecCCCCChHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHH
Confidence 345666652 234566555321 25699999999 99999999 999999999999999544 99999998
Q ss_pred hcCCceeeeeccCC
Q psy4417 74 KSDGNIQFTIAPQG 87 (440)
Q Consensus 74 ~~~~~v~l~v~p~~ 87 (440)
..++.+.|.|....
T Consensus 92 ~~g~~v~l~v~R~g 105 (118)
T 2yub_A 92 QTSQTLQLLIEHDP 105 (118)
T ss_dssp CCSSCEEEEEEECS
T ss_pred hCCCEEEEEEEECC
Confidence 66778888887644
No 370
>3a98_A DOCK2, dedicator of cytokinesis protein 2; protein-protein complex, DOCK2, ELMO1, SH3 domain, PH domain bundle, proline-rich sequence, cytoskeleton; 2.10A {Homo sapiens}
Probab=98.43 E-value=5.3e-08 Score=88.23 Aligned_cols=57 Identities=16% Similarity=0.335 Sum_probs=49.7
Q ss_pred cccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 97 VCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 97 ~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
..+++|+|+|.+..++ +|+|++||++.|+++.++ ||.++....++..|+||++|++.
T Consensus 17 ~~~~~Alydf~~~~~~-------eLs~~~Gd~i~v~~~~~~-W~~g~~~~~~g~~G~fP~nyV~~ 73 (184)
T 3a98_A 17 ERHGVAIYNFQGSGAP-------QLSLQIGDVVRIQETCGD-WYRGYLIKHKMLQGIFPKSFIHI 73 (184)
T ss_dssp CCEEEESSCBCCSSTT-------BCCBCTTCEEEEEEEETT-EEEEEETTEEEEEEEEEGGGEEE
T ss_pred ceEEEEeeeeCCCCCC-------CCCcCCCCEEEEEecCCC-EEEEEEecCCCceEEECcceEEE
Confidence 4578999999998877 999999999999998774 99999865457899999999865
No 371
>1ng2_A Neutrophil cytosolic factor 1; P47PHOX, autoinhibited, SH3 domain, NADPH oxidase, oxidoredu activator; 1.70A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 PDB: 1uec_A 1ov3_A 1wlp_B
Probab=98.42 E-value=1.8e-07 Score=85.35 Aligned_cols=56 Identities=23% Similarity=0.595 Sum_probs=49.8
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
....++|+|||.+..++ +|+|++||++.|++..+.+||.++. ++..|+||++++..
T Consensus 10 ~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~vl~~~~~gWw~g~~---~g~~G~~P~~yv~~ 65 (193)
T 1ng2_A 10 ILQTYRAIADYEKTSGS-------EMALSTGDVVEVVEKSESGWWFCQM---KAKRGWIPASFLEP 65 (193)
T ss_dssp CCEEEECSSCBCCSSTT-------CCCBCTTCEEEEEECCTTSCCEEEE---CCCCCCCCGGGCCC
T ss_pred cCcEEEEcCCcCCCCCC-------cCCCCCCCEEEEEEecCCCeEEEEE---CCeeeEechheEEe
Confidence 34568999999998877 9999999999999999999999995 57899999999864
No 372
>3jv3_A Intersectin-1; SH3 domain, DH domain, guanine nucleotide exchange factor, autoinhibition, domain-swapped, cell junction, cell project endocytosis; 2.40A {Mus musculus} PDB: 3gf9_A
Probab=98.42 E-value=1e-07 Score=91.76 Aligned_cols=54 Identities=35% Similarity=0.925 Sum_probs=49.0
Q ss_pred ccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 98 CYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 98 ~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
..++|+|||.+..++ +|+|.+||++.|++..+++||.++. ++..|+||++++..
T Consensus 3 ~~~~a~~~~~~~~~~-------el~~~~gd~i~v~~~~~~~w~~~~~---~g~~G~~P~~~v~~ 56 (283)
T 3jv3_A 3 CQVIGMYDYTAQNDD-------ELAFSKGQIINVLNKEDPDWWKGEV---SGQVGLFPSNYVKL 56 (283)
T ss_dssp EEEEESSCBCCSSTT-------BCCBCTTCEEEEEECCSTTEEEEEE---TTEEEEEEGGGEEE
T ss_pred eEEEEccccCCCCCC-------cCCCCCCCEEEEEecCCCCEEEEEE---CCCCCcCCCccccc
Confidence 468999999998877 9999999999999999999999986 47899999999975
No 373
>3qwy_A Cell death abnormality protein 2; cell engulfment, signaling protein; 2.52A {Caenorhabditis elegans}
Probab=98.39 E-value=3.4e-07 Score=89.64 Aligned_cols=87 Identities=20% Similarity=0.357 Sum_probs=64.1
Q ss_pred CccCCCHHHHHHHHHhcCCceeeeeccCCCCCCCCCCccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCC
Q psy4417 59 GENVSSPEDLQIEVVKSDGNIQFTIAPQGDDASLPIKPVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPN 138 (440)
Q Consensus 59 g~~v~t~~e~~~~L~~~~~~v~l~v~p~~~~~~~~~~~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ 138 (440)
+....+..++....+...........|.. .....+++|+|||.+..+. +|+|++||++.|++..|.+
T Consensus 115 ~~~F~Sl~eLv~~y~~~~~~~~~L~~P~~------~p~~~~~~al~dy~~~~~~-------eLsf~~Gd~i~v~~~~~~~ 181 (308)
T 3qwy_A 115 NQSFPDIPALLNHFKMRVLTEASLLAAYK------KPIIEVVVGTFKFTGERET-------DLPFEQGERLEILSKTNQD 181 (308)
T ss_dssp TEEESSHHHHHHHHHHSCSSSCCCCEECC------CCCCEEEEESSCBCCSSTT-------BCCBCTTCEEEEEECCSSS
T ss_pred CeeeCCHHHHHHHHhhcccccchhccccc------cccceeEEEeceEcCCCCC-------cCcCCCCCEEEEEEcCCCC
Confidence 43446777777766644332222222221 1134679999999998877 9999999999999999999
Q ss_pred ceEEEecCCCCCCccccchhHH
Q psy4417 139 WWQAQLIEPTGPMGLVPSQELE 160 (440)
Q Consensus 139 ww~a~~~~~~~~~G~iPs~~~~ 160 (440)
||.++.. ++..|+||+++++
T Consensus 182 Ww~g~~~--~g~~G~~P~~yv~ 201 (308)
T 3qwy_A 182 WWEARNA--LGTTGLVPANYVQ 201 (308)
T ss_dssp EEEEECT--TSCEEEEEGGGEE
T ss_pred eEEEEeC--CCCeeEecccccc
Confidence 9999963 4679999999997
No 374
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=98.38 E-value=1.5e-07 Score=98.97 Aligned_cols=59 Identities=31% Similarity=0.709 Sum_probs=50.7
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHHh
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEER 162 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~r 162 (440)
....++|+|||++..++ +|+|++||++.|++..|.+||+++... ++..|+||++|+++.
T Consensus 84 ~~~~~~alyd~~~~~~~-------el~~~~gd~i~v~~~~~~~ww~~~~~~-~g~~G~~P~~yv~~~ 142 (535)
T 2h8h_A 84 GVTTFVALYDYESRTET-------DLSFKKGERLQIVNNTEGDWWLAHSLS-TGQTGYIPSNYVAPS 142 (535)
T ss_dssp ---CEEESSCBCCCSSS-------BCCBCTTCEEEEEECSSSSEEEEEETT-TCCEEEEEGGGEEET
T ss_pred CCcEEEEccccCCcCCC-------cCCcCCCCEEEEEEecCCCceEEEECC-CCcceEecchhhccc
Confidence 34578999999999887 999999999999999999999999853 478999999999863
No 375
>1ng2_A Neutrophil cytosolic factor 1; P47PHOX, autoinhibited, SH3 domain, NADPH oxidase, oxidoredu activator; 1.70A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 PDB: 1uec_A 1ov3_A 1wlp_B
Probab=98.37 E-value=2.2e-07 Score=84.75 Aligned_cols=55 Identities=16% Similarity=0.354 Sum_probs=49.2
Q ss_pred cccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 97 VCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 97 ~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
...++|+|+|.+..++ +|+|.+||++.|++..+.+||.++. ++..|+||++|+..
T Consensus 81 ~~~~~al~dy~a~~~~-------eLs~~~Gd~i~vl~~~~~gWw~g~~---~g~~G~~P~~yv~~ 135 (193)
T 1ng2_A 81 GEPYVAIKAYTAVEGD-------EVSLLEGEAVEVIHKLLDGWWVIRK---DDVTGYFPSMYLQK 135 (193)
T ss_dssp CEEEEESSCBCCCSTT-------BCCBCTTCEEEEEECCTTSEEEEEE---TTEEEEEEGGGEEE
T ss_pred ceeeeeccccCCCCCC-------cccccCCCEEEEEEecCCCeEEEEE---CCCEEEEehHHeEE
Confidence 3567899999998887 9999999999999998999999996 57899999999864
No 376
>1tuc_A Alpha-spectrin; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton; 2.02A {Gallus gallus} SCOP: b.34.2.1
Probab=98.35 E-value=1.9e-07 Score=69.20 Aligned_cols=40 Identities=28% Similarity=0.753 Sum_probs=36.1
Q ss_pred ccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 119 IGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 119 ~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
.+|+|++||++.|++..+++||.++. ++..|+||+++++.
T Consensus 4 ~eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv~~ 43 (63)
T 1tuc_A 4 REVTMKKGDILTLLNSTNKDWWKVEV---NDRQGFVPAAYVKK 43 (63)
T ss_dssp CCCCBCTTCEEEEEECCSSSEEEEEE---TTEEEEEEGGGEEE
T ss_pred cccCCCCCCEEEEEEecCCCEEEEEE---CCcEEEEeHHHEEE
Confidence 38999999999999999999999985 57899999999964
No 377
>2eyz_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH2, SH3, signaling protein; NMR {Homo sapiens} PDB: 2l3s_A 2l3p_A 2l3q_A 2ggr_A
Probab=98.34 E-value=4e-07 Score=88.95 Aligned_cols=58 Identities=31% Similarity=0.737 Sum_probs=51.3
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHHh
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEER 162 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~r 162 (440)
...+++|+|+|.+..+. +|+|++||++.|+++.+.+||.++.. ++..|+||+++++..
T Consensus 133 ~~~~~~alydy~~~~~~-------eLsf~~Gd~i~v~~~~~~~Ww~g~~~--~g~~G~~P~~yv~~~ 190 (304)
T 2eyz_A 133 EAEYVRALFDFNGNDEE-------DLPFKKGDILRIRDKPEEQWWNAEDS--EGKRGMIPVPYVEKY 190 (304)
T ss_dssp CCCEEEECSCCCCSCSS-------SCCCCTTCEEEEEECCSSSEEEEECT--TSCEEEEESTTEEEC
T ss_pred cceeEEEEeeecCCCCC-------cCcccCCCEEEEEEecCCCcEEEEeC--CCceeccchhccccc
Confidence 45689999999998877 99999999999999999999999853 478999999999753
No 378
>1v1c_A Obscurin; muscle, sarcomere, adapter, myogenesis, SH3-domain; NMR {Homo sapiens}
Probab=98.30 E-value=3e-07 Score=68.68 Aligned_cols=58 Identities=21% Similarity=0.385 Sum_probs=47.3
Q ss_pred ccccccCCCC--CCCCCCCccccceeccCCEEEEeecCCCCceEEEecC---CCCCCccccchhHHHhhh
Q psy4417 100 MRCLFTYDPK--EDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIE---PTGPMGLVPSQELEERRK 164 (440)
Q Consensus 100 vRal~dy~p~--~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~---~~~~~G~iPs~~~~~rr~ 164 (440)
.++..||.|. ..+ +++++.||+++|+++.+++||..|... ..+..|++|++|+..+++
T Consensus 8 Y~v~aDy~p~~~~~~-------ei~lk~Gd~VeVl~k~~~gwW~vr~~~~~~~~~~eGWVPa~yLe~~~~ 70 (71)
T 1v1c_A 8 YVVTADYLPLGAEQD-------AITLREGQYVEVLDAAHPLRWLVRTKPTKSSPSRQGWVSPAYLDRRLK 70 (71)
T ss_dssp EEESSCBCCCSCCTT-------BCCBCTTCEEEEEEEEETTEEEEEECCCTTCCCCEEEECGGGEEEECC
T ss_pred EEEEecccccCCCcc-------eeeecCCCEEEEEEcCCCCEEEEEecCCCCCCCccceecHHHhhhhhc
Confidence 3678899653 333 899999999999999999999999873 347899999999876543
No 379
>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D
Probab=98.27 E-value=3.7e-07 Score=94.36 Aligned_cols=56 Identities=20% Similarity=0.531 Sum_probs=50.6
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
...+++|+|||.+..++ +|+|++||++.|++..+++||.++. ++..|+||++|+..
T Consensus 29 ~~~~~~al~~~~~~~~~-------eL~~~~gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv~~ 84 (466)
T 2pz1_A 29 SVVCAEALWDHVTMDDQ-------ELGFKAGDVIEVMDATNREWWWGRV---ADGEGWFPASFVRL 84 (466)
T ss_dssp CCEEEEESSCBCCCCTT-------BCCBCTTCEEEEEECCSSSEEEEEE---TTEEEEEEGGGEEE
T ss_pred CccEEEEccccCCCCCC-------cCCCCCCCEEEEEEecCCCEEEEEE---CCcEEEEehhHeee
Confidence 45789999999998877 9999999999999999999999997 46799999999864
No 380
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=98.27 E-value=3.3e-07 Score=94.14 Aligned_cols=55 Identities=31% Similarity=0.753 Sum_probs=49.6
Q ss_pred cccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 99 YMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 99 ~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
.++|+|||.+..++ +|+|++||++.|+++.+++||.++... ++..|+||++|+++
T Consensus 4 ~~~al~~~~~~~~~-------el~~~~gd~~~v~~~~~~~ww~~~~~~-~g~~G~~P~~yv~~ 58 (452)
T 1fmk_A 4 TFVALYDYESRTET-------DLSFKKGERLQIVNNTEGDWWLAHSLS-TGQTGYIPSNYVAP 58 (452)
T ss_dssp EEEESSCBCCCSSS-------BCCBCTTCEEEESCCCSSSEEEEEETT-TCCEEEEEGGGEEE
T ss_pred EEEECCccCCCCCC-------CCCccCCCEEEEeccCCCCceEEEEcC-CCcccccCcccccc
Confidence 57899999998887 999999999999999999999999853 37899999999975
No 381
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=98.26 E-value=3.1e-06 Score=76.97 Aligned_cols=79 Identities=22% Similarity=0.362 Sum_probs=64.2
Q ss_pred eEEEEee-CCCCccEEEEecC----CCcEEEEEEcCCChhhhcCCCCCCCEEEeECCccCCC--HHHHHHHHHhcCCcee
Q psy4417 8 LKKILGT-GLSPCGLTVEQDA----NGNLIIARILAGSLIDKQGVLKVGDVILGVNGENVSS--PEDLQIEVVKSDGNIQ 80 (440)
Q Consensus 8 r~v~l~r-~g~~lGiti~~~~----~~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v~t--~~e~~~~L~~~~~~v~ 80 (440)
..+.+.+ ....|||++.... ..+++|..|.++|||+++|.|+.||.|++|||.++.+ ++++..+|+..++.+.
T Consensus 109 ~~v~l~~~~~~~lG~~~~~~~~~~~~~gv~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~ 188 (196)
T 1p1d_A 109 FHVKLPKKHSVELGITISSPSSRKPGDPLVISDIKKGSVAHRTGTLELGDKLLAIDNIRLDSCSMEDAVQILQQCEDLVK 188 (196)
T ss_dssp EEEEECCCSSCCCCCEEECSCSSSTTCCCEEEECCSSSHHHHTSCCCTTCEEEEETTEEGGGCCHHHHHHHHHHCTTCEE
T ss_pred EEEEecCCCCCCcCEEEECCCCCCCCCCEEEEEECCCCcHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCEEE
Confidence 3444443 3457899987642 2468999999999999999999999999999999944 9999999998788888
Q ss_pred eeeccC
Q psy4417 81 FTIAPQ 86 (440)
Q Consensus 81 l~v~p~ 86 (440)
|.+...
T Consensus 189 l~v~R~ 194 (196)
T 1p1d_A 189 LKIRKD 194 (196)
T ss_dssp EEEECC
T ss_pred EEEEeC
Confidence 888653
No 382
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=98.26 E-value=4.3e-07 Score=93.20 Aligned_cols=57 Identities=28% Similarity=0.608 Sum_probs=50.1
Q ss_pred cccccccccCCCCCCCCCCCccccceeccCCEEEEeec-CCCCceEEEecCCCCCCccccchhHHHh
Q psy4417 97 VCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQ-KDPNWWQAQLIEPTGPMGLVPSQELEER 162 (440)
Q Consensus 97 ~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~-~d~~ww~a~~~~~~~~~G~iPs~~~~~r 162 (440)
..+++|+|||.+..++ +|+|++||++.|++. .|++||.++.. ++..|+||++|+.+.
T Consensus 11 ~~~~~aly~~~~~~~~-------el~~~~gd~i~v~~~~~~~~ww~~~~~--~g~~G~~P~~yv~~~ 68 (450)
T 1k9a_A 11 GTECIAKYNFHGTAEQ-------DLPFCKGDVLTIVAVTKDPNWYKAKNK--VGREGIIPANYVQKR 68 (450)
T ss_dssp TCEEEESSCBCCSSSS-------BCCBCTTCEEEEEEECSSTTEEEEECT--TCCEEEEEGGGEEEC
T ss_pred CCEEEECCCcCccCCC-------cCCCCCCCEEEEeeccCCCCceEEEEC--CCceeeechhccccc
Confidence 4578999999999887 999999999999997 68899999864 478999999999763
No 383
>2eyz_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH2, SH3, signaling protein; NMR {Homo sapiens} PDB: 2l3s_A 2l3p_A 2l3q_A 2ggr_A
Probab=98.23 E-value=6.1e-07 Score=87.65 Aligned_cols=56 Identities=18% Similarity=0.398 Sum_probs=48.4
Q ss_pred ccccccccccCCCC--CCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 96 PVCYMRCLFTYDPK--EDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 96 ~~~~vRal~dy~p~--~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
...+++|+|||.|. .++ +|+|++||++.|+.+.+++||.++. ++..|++|++|++.
T Consensus 236 ~~~~~~al~d~~~~a~~~~-------eL~~~~Gd~i~v~~~~~~gWw~g~~---~g~~G~fP~~yv~~ 293 (304)
T 2eyz_A 236 GPIYARVIQKRVPNAYDKT-------ALALEVGELVKVTKINVSGQWEGEC---NGKRGHFPFTHVRL 293 (304)
T ss_dssp CCCCSCCSSCBCCCTTCSS-------CCCBCTTSCCEEEEECTTSCEEEEE---TTEEEECCCTTSCC
T ss_pred CCEEEEEeeeecCCCCCCC-------eecccCCCEEEEEEecCCCeEEEEE---CCceEEechHHEEE
Confidence 34689999999953 544 9999999999999999999999987 47899999999864
No 384
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=98.23 E-value=1.6e-06 Score=87.67 Aligned_cols=96 Identities=8% Similarity=0.036 Sum_probs=59.8
Q ss_pred cCCeEEeecCcchhhhhhhhhccccccccCCCceEEecCCCccceeecCCCcccchhhccCccccccCHHHHHHHHHcCc
Q psy4417 260 SGKICVLDCSPVGLFTFLLGLIEGTVTAKLIPYTYSIPICSWSSFFASDTTRPMRELEENGQNYWFTSREVMERDIQDHK 339 (440)
Q Consensus 260 ~g~~~il~~~~~g~~~l~~~l~~~~~~~~~~p~~i~i~~~~~~~f~~~~ttr~~~~~e~~g~~y~f~s~~~f~~~~~~~~ 339 (440)
.++++|| ++|+| .+|++.|++.+. .. |.. |||++|++|++|++|||++.+..+..+++|+
T Consensus 231 ~~r~iVl-sGPsg-~tl~~~L~~~~p------~~----------~~~--~tr~pR~gE~dG~~Y~Fv~~~~V~~~~~~Gk 290 (391)
T 3tsz_A 231 FLRPVTI-FGPIA-DVAREKLAREEP------DI----------YQI--AKSEPRDAGTDQRSSGIIRLHTIKQIIDQDK 290 (391)
T ss_dssp SCCCEEE-ESTTH-HHHHHHHHHHCT------TT----------EEE--CCCCCCCSSSCCC--CCCCHHHHHHHHTTTC
T ss_pred CCCEEEE-ECCCH-HHHHHHHHhhCc------cc----------ccc--ccCCCCCcccCCccCCcCcHHHHHHHHHcCC
Confidence 4566666 78999 788888886643 22 222 6899999999999999997777666666665
Q ss_pred eeeEEEEcCccccccHHHHHHHHhcC--CeeEecCCCcHHHHHHHH
Q psy4417 340 FLEYGEHNGHLYGTHLDSIREVILSG--KICVLDCSPVEEDIKRTL 383 (440)
Q Consensus 340 fle~~~~~~~~yGt~~~~i~~~~~~~--~~~i~~~~~s~e~l~~~l 383 (440)
-.-. -+....++.+-... -+.||+.|||.++|+++.
T Consensus 291 ~~iL--------dId~qg~~~l~~~~~~p~~IFI~PPS~~~L~~~~ 328 (391)
T 3tsz_A 291 HALL--------DVTPNAVDRLNYAQWYPIVVFLNPDSKQGVKTMR 328 (391)
T ss_dssp EEEE--------CCCHHHHHHHHHTTCCCEEEEEECCCHHHHHHHH
T ss_pred EEEE--------EeCHHHHHHHHhCCCCCEEEEEeCcCHHHHHHHH
Confidence 4321 01122222222111 135677899999999863
No 385
>2dyb_A Neutrophil cytosol factor 4; P40(PHOX), NADPH oxidase, oxidoreductase; HET: CAF; 3.15A {Homo sapiens}
Probab=98.23 E-value=4.7e-07 Score=89.89 Aligned_cols=55 Identities=20% Similarity=0.485 Sum_probs=49.6
Q ss_pred cccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 97 VCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 97 ~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
...++|+|||.+..++ +|+|++||++.|++..+++||.++. ++..|+||++|+..
T Consensus 174 ~~~~~alydy~~~~~~-------eLsf~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv~~ 228 (341)
T 2dyb_A 174 APRAEALFDFTGNSKL-------ELNFKAGDVIFLLSRINKDWLEGTV---RGATGIFPLSFVKI 228 (341)
T ss_dssp CCEEEESSCBCCSSSS-------BCCBCTTCEEEEEEECSSSEEEEEE---TTEEEEEEGGGEEE
T ss_pred CcEEEEEEeeCCCCCC-------cCCccCCCEEEEEEecCCCEEEEEE---CCcEEEechHHeEE
Confidence 3568999999998887 9999999999999999999999996 47899999999964
No 386
>2jmc_A Spectrin alpha chain, brain and P41 peptide chimera; SPC-SH3, signaling protein; NMR {Gallus gallus}
Probab=98.22 E-value=3.9e-07 Score=70.37 Aligned_cols=39 Identities=28% Similarity=0.793 Sum_probs=35.8
Q ss_pred cceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 120 GLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 120 ~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
+|+|++||++.|+++.+.+||.++. ++..|+||++++..
T Consensus 7 eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv~~ 45 (77)
T 2jmc_A 7 EVTMKKGDILTLLNSTNKDWWKVEV---NDRQGFVPAAYVKK 45 (77)
T ss_dssp CCCCCTTCEEECCCCCCSSCCCEEE---TTEEECCCGGGEEE
T ss_pred ccCCCCCCEEEEEEecCCCEEEEEE---CCcEEEEEeeEEEE
Confidence 8999999999999999999999986 47899999999964
No 387
>3lnc_A Guanylate kinase, GMP kinase; ALS collaborative crystallography, emerald biostructures, ATP-binding, cytoplasm, nucleotide-binding; HET: 5GP; 1.95A {Anaplasma phagocytophilum}
Probab=98.21 E-value=3.8e-06 Score=78.13 Aligned_cols=102 Identities=25% Similarity=0.270 Sum_probs=79.0
Q ss_pred HhcCC-eEEeecCcchhhhhhhhhccccccccCCCceEEecCCCccceeecCCCcccchhhccCccccccCHHHHHHHHH
Q psy4417 258 ILSGK-ICVLDCSPVGLFTFLLGLIEGTVTAKLIPYTYSIPICSWSSFFASDTTRPMRELEENGQNYWFTSREVMERDIQ 336 (440)
Q Consensus 258 ~~~g~-~~il~~~~~g~~~l~~~l~~~~~~~~~~p~~i~i~~~~~~~f~~~~ttr~~~~~e~~g~~y~f~s~~~f~~~~~ 336 (440)
+.+|. ++|++.+.+|..+|++.|.++ +.|.++ +..+++||+++.++.+|.+|+|++.+.|..+..
T Consensus 24 v~~G~ii~l~Gp~GsGKSTl~~~L~~~-----~~~~~~---------~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~ 89 (231)
T 3lnc_A 24 KSVGVILVLSSPSGCGKTTVANKLLEK-----QKNNIV---------KSVSVTTRAARKGEKEGKDYYFVDREEFLRLCS 89 (231)
T ss_dssp EECCCEEEEECSCC----CHHHHHHC---------CEE---------ECCCEESSCCCTTCCBTTTBEECCHHHHHHHHH
T ss_pred cCCCCEEEEECCCCCCHHHHHHHHHhc-----CCCCcc---------cccccCCCCCCccccCCCeEEEecHHHhhhhhh
Confidence 45676 445555555666676655412 223344 777899999999999999999999999999999
Q ss_pred cCceeeEEEEcCccccccHHHHHHHHhcCCeeEecCC
Q psy4417 337 DHKFLEYGEHNGHLYGTHLDSIREVILSGKICVLDCS 373 (440)
Q Consensus 337 ~~~fle~~~~~~~~yGt~~~~i~~~~~~~~~~i~~~~ 373 (440)
.+.|+++.++.++.||++.+.+++.++.|+.++++.+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~vild~~ 126 (231)
T 3lnc_A 90 NGEIIEHAEVFGNFYGVPRKNLEDNVDKGVSTLLVID 126 (231)
T ss_dssp TTCEEEEEEETTEEEEEECTTHHHHHHHTCEEEEECC
T ss_pred cCceehhhhhccccCCCCHHHHHHHHHcCCeEEEEcC
Confidence 9999999999999999999999999999999888764
No 388
>1gri_A Growth factor bound protein 2; SH2, SH3, signal transduction adaptor; 3.10A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 d.93.1.1 PDB: 1aze_A 2a37_A 2azv_A 2a36_A 2azs_A
Probab=98.21 E-value=4.6e-07 Score=83.87 Aligned_cols=52 Identities=35% Similarity=0.767 Sum_probs=42.4
Q ss_pred cccccccCCCCCCCCCCCccccceeccCCEEEEeecC-CCCceEEEecCCCCCCccccchhHH
Q psy4417 99 YMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQK-DPNWWQAQLIEPTGPMGLVPSQELE 160 (440)
Q Consensus 99 ~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~-d~~ww~a~~~~~~~~~G~iPs~~~~ 160 (440)
.++|+|+|.+..++ +|+|++||++.|++.. +.+||.++. ++..|+||++++.
T Consensus 2 ~~~al~~~~~~~~~-------eLs~~~Gd~i~v~~~~~~~~W~~~~~---~g~~G~~P~~yv~ 54 (217)
T 1gri_A 2 EAIAKYDFKATADD-------ELSFKRGDILKVLNEECDQNWYKAEL---NGKDGFIPKNYIE 54 (217)
T ss_dssp EEEECSCBCCCSSS-------CCCBCTTCEEEC------CCEEEEES---SSCEEEEEGGGEE
T ss_pred EEEEeeccCCcCCC-------cCCCCCCCEEEEEeccCCCCeEeecc---CCccceECCcccc
Confidence 47899999998877 9999999999999876 788999985 5789999999986
No 389
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=98.17 E-value=2e-06 Score=88.39 Aligned_cols=96 Identities=8% Similarity=0.040 Sum_probs=45.9
Q ss_pred cCCeEEeecCcchhhhhhhhhccccccccCCCceEEecCCCccceeecCCCcccchhhccCccccccCHHHHHHHHHcCc
Q psy4417 260 SGKICVLDCSPVGLFTFLLGLIEGTVTAKLIPYTYSIPICSWSSFFASDTTRPMRELEENGQNYWFTSREVMERDIQDHK 339 (440)
Q Consensus 260 ~g~~~il~~~~~g~~~l~~~l~~~~~~~~~~p~~i~i~~~~~~~f~~~~ttr~~~~~e~~g~~y~f~s~~~f~~~~~~~~ 339 (440)
.++++|| ++|+|+- |++.|++.+. .. |. ++||| +|++|++|++|||++.+..+..++.|+
T Consensus 223 ~~r~iVl-sGPsG~G-l~~~Ll~~~p------~~----------f~-s~~TR-pR~gE~dG~~Y~FTs~~~V~~vl~~Gk 282 (468)
T 3shw_A 223 FLRPVTI-FGPIADV-AREKLAREEP------DI----------YQ-IAKSE-PRDAGTDQRSSGIIRLHTIKQIIDQDK 282 (468)
T ss_dssp SCCCEEE-ESTTHHH-HHHHHHHHCT------TT----------EE-ECCCB-C----------CBCCHHHHHHHHTTTC
T ss_pred CCCEEEE-ECCCHHH-HHHHHHHhCC------Cc----------ee-eecCC-CCCcccccccCCcccHHHHHHHHHCCC
Confidence 4566655 7888876 7777876543 21 22 24689 899999999999955555555554443
Q ss_pred eeeEEEEcCccccccHHHHHHHHhcC--CeeEecCCCcHHHHHHHH
Q psy4417 340 FLEYGEHNGHLYGTHLDSIREVILSG--KICVLDCSPVEEDIKRTL 383 (440)
Q Consensus 340 fle~~~~~~~~yGt~~~~i~~~~~~~--~~~i~~~~~s~e~l~~~l 383 (440)
..-. -+....++.+-... -+.||+.|||.++|+++.
T Consensus 283 ~~iL--------dId~qg~~~l~~~~~~p~~IFI~PPS~e~L~~~~ 320 (468)
T 3shw_A 283 HALL--------DVTPNAVDRLNYAQWYPIVVFLNPDSKQGVKTMR 320 (468)
T ss_dssp EEEE--------CCCHHHHHHHHHTTCCCEEEEEECSCHHHHHHHH
T ss_pred eEEE--------EeCHHHHHHHHhcCCCCEEEEEeCcCHHHHHHHH
Confidence 3210 01111122221111 124566799999998743
No 390
>2lqn_A CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT10 oncogene homolog (avian)- signaling protein; NMR {Homo sapiens} PDB: 2lqw_A*
Probab=97.45 E-value=2.6e-07 Score=90.31 Aligned_cols=58 Identities=28% Similarity=0.702 Sum_probs=51.3
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHHh
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEER 162 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~r 162 (440)
...+++|+|||.+..+. +|+|++||++.|++..+.+||.++.. ++..|+||++|++.-
T Consensus 124 ~~~~~~alydy~~~~~~-------eLsf~~Gd~i~v~~~~~~~Ww~~~~~--~g~~G~~P~~yv~~~ 181 (303)
T 2lqn_A 124 NLEYVRTLYDFPGNDAE-------DLPFKKGEILVIIEKPEEQWWSARNK--DGRVGMIPVPYVEKL 181 (303)
Confidence 45678999999998877 99999999999999999999999864 478999999999763
No 391
>2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens}
Probab=98.12 E-value=1.8e-06 Score=90.22 Aligned_cols=58 Identities=17% Similarity=0.342 Sum_probs=51.0
Q ss_pred cccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHHh
Q psy4417 97 VCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEER 162 (440)
Q Consensus 97 ~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~r 162 (440)
...++|+|+|.|+.++ +|+|++||++.|+++.+++||.++... ++..|++|++|+++.
T Consensus 442 ~~~~~aly~y~a~~~d-------ELs~~~GD~i~v~~~~~~gW~~G~~~~-~g~~G~fPsnyV~~~ 499 (526)
T 2de0_X 442 AHNQIAIYAHQPRTAD-------EIPMEPGDIIGVAGNHWDGYSKGVNRK-LGRTGLYPSYKVREK 499 (526)
T ss_dssp CCEEEECSCBCCSSTT-------BCCBCTTCEEEEEEECSSSEEEEEETT-TTEEEEEEGGGEEEC
T ss_pred ccceEEeecCCCCCCC-------cCCcCCCCEEEEccccCCCeeEEEeCC-CCCEEEECchheeEc
Confidence 3568899999999888 999999999999999999999998643 478999999999764
No 392
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=98.12 E-value=1.2e-06 Score=91.10 Aligned_cols=55 Identities=24% Similarity=0.446 Sum_probs=47.3
Q ss_pred ccccccccccCCCCCCCCCCCccccceeccCCEEEEeecC-CCCceEEEecCCCCCCccccchhHH
Q psy4417 96 PVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQK-DPNWWQAQLIEPTGPMGLVPSQELE 160 (440)
Q Consensus 96 ~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~-d~~ww~a~~~~~~~~~G~iPs~~~~ 160 (440)
....++|+|||.+..++ +|+|++||++.|++.. +++||.++.. +..|+||++|+.
T Consensus 42 ~~~~~~alyd~~~~~~~-------els~~~gd~~~v~~~~~~~~w~~~~~~---~~~G~~P~~yv~ 97 (495)
T 1opk_A 42 DPNLFVALYDFVASGDN-------TLSITKGEKLRVLGYNHNGEWCEAQTK---NGQGWVPSNYIT 97 (495)
T ss_dssp --CEEEESSCBCCCSTT-------BCCBCTTCEEEEEEECTTSSEEEEECS---SCEEEEEGGGEE
T ss_pred CCcEEEEeCCcCCCCCC-------CCCccCCCEEEEeecCCCCCceeeeec---CCcceecccccc
Confidence 34578999999998887 9999999999999966 8899999873 567999999996
No 393
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=98.11 E-value=9.1e-06 Score=65.76 Aligned_cols=55 Identities=11% Similarity=0.215 Sum_probs=48.7
Q ss_pred CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccCCCHHHHHHHHHh--cCCceeeeecc
Q psy4417 29 GNLIIARILAGSLIDKQGVLKVGDVILGVNGENVSSPEDLQIEVVK--SDGNIQFTIAP 85 (440)
Q Consensus 29 ~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v~t~~e~~~~L~~--~~~~v~l~v~p 85 (440)
.+++|..|.++|||+. | |+.||.|++|||..+.+.+++..+|.. .++.+.|++..
T Consensus 7 ~Gv~V~~V~~~spA~~-G-L~~GD~I~~Ing~~v~~~~dl~~~l~~~~~g~~v~l~v~R 63 (100)
T 3i18_A 7 DGVYVMSVKDDVPAAD-V-LHAGDLITEIDGNAFKSSQEFIDYIHSKKVGDTVKINYKH 63 (100)
T ss_dssp CCEEEEEECTTSGGGG-T-CCTTCEEEEETTBCCSSHHHHHHHHHTSCTTCEEEEEEEE
T ss_pred CCEEEEEeCCCCchHH-C-CCCCCEEEEECCEECCCHHHHHHHHHhCCCCCEEEEEEEE
Confidence 5689999999999995 8 999999999999999999999999985 36778888865
No 394
>3tr0_A Guanylate kinase, GMP kinase; purines, pyrimidines, nucleosides, nucleotides, transferase; HET: 5GP; 1.85A {Coxiella burnetii}
Probab=98.10 E-value=1.3e-05 Score=72.62 Aligned_cols=99 Identities=21% Similarity=0.329 Sum_probs=79.5
Q ss_pred hcCC-eEEeecCcchhhhhhhhhccccccccCCCceEEecCCCccceeecCCCcccchhhccCccccccCHHHHHHHHHc
Q psy4417 259 LSGK-ICVLDCSPVGLFTFLLGLIEGTVTAKLIPYTYSIPICSWSSFFASDTTRPMRELEENGQNYWFTSREVMERDIQD 337 (440)
Q Consensus 259 ~~g~-~~il~~~~~g~~~l~~~l~~~~~~~~~~p~~i~i~~~~~~~f~~~~ttr~~~~~e~~g~~y~f~s~~~f~~~~~~ 337 (440)
.+|. ++|++.+.+|..+|++.|... .|.+. +....++|+++.++.+|..|+|.+...|..+...
T Consensus 5 ~~g~ii~l~Gp~GsGKSTl~~~L~~~------~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (205)
T 3tr0_A 5 NKANLFIISAPSGAGKTSLVRALVKA------LAEIK---------ISISHTTRPKRPGDQEGVDYFFIDETRFQAMVKE 69 (205)
T ss_dssp CCCCEEEEECCTTSCHHHHHHHHHHH------SSSEE---------ECCCEECSCCCTTCCBTTTBEECCHHHHHHHHHH
T ss_pred CCCcEEEEECcCCCCHHHHHHHHHhh------CCCeE---------EeceeccCCCchhHhcCceEEeccHHHHHHHHhc
Confidence 4565 456666666777776655422 24333 5557788888888899999999999999999999
Q ss_pred CceeeEEEEcCccccccHHHHHHHHhcCCeeEecC
Q psy4417 338 HKFLEYGEHNGHLYGTHLDSIREVILSGKICVLDC 372 (440)
Q Consensus 338 ~~fle~~~~~~~~yGt~~~~i~~~~~~~~~~i~~~ 372 (440)
+.|+++..+.++.||++.+.+++.+..|+.++++.
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~i~~~l~~g~~vi~d~ 104 (205)
T 3tr0_A 70 GAFLEHATIYERHYGTEKDWVLRQLKAGRDVLLEI 104 (205)
T ss_dssp TCEEEEEEETTEEEEEEHHHHHHHHHTTCEEEEEC
T ss_pred CcEEeeeeeecccccchHHHHHHHHHcCCeEEEEE
Confidence 99999999999999999999999999999887764
No 395
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=98.10 E-value=6.2e-06 Score=68.11 Aligned_cols=56 Identities=27% Similarity=0.465 Sum_probs=50.1
Q ss_pred CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccCCCHHHHHHHHHhcCCceeeeeccC
Q psy4417 29 GNLIIARILAGSLIDKQGVLKVGDVILGVNGENVSSPEDLQIEVVKSDGNIQFTIAPQ 86 (440)
Q Consensus 29 ~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v~t~~e~~~~L~~~~~~v~l~v~p~ 86 (440)
.+++|..|.++|||+++| |+.||.|++|||.++.+.+++..+|+. ++.+.+++...
T Consensus 35 ~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~l~~-~~~v~l~v~R~ 90 (113)
T 2pzd_A 35 HGVLIHKVILGSPAHRAG-LRPGDVILAIGEQMVQNAEDVYEAVRT-QSQLAVQIRRG 90 (113)
T ss_dssp SCEEEEEEBTTSHHHHHT-CCTTCEEEEETTEECCSHHHHHHHHHH-CSSEEEEEEET
T ss_pred CCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCHHHHHHHHhC-CCeEEEEEEEC
Confidence 569999999999999999 999999999999999889999988886 67788888653
No 396
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=98.08 E-value=2e-06 Score=88.25 Aligned_cols=56 Identities=25% Similarity=0.607 Sum_probs=48.3
Q ss_pred cccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 97 VCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 97 ~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
..+++|+|||.+..++ +|+|++||++.|++. +++||.++... ++..|+||++|+..
T Consensus 8 ~~~~~al~~~~~~~~~-------el~~~~gd~~~v~~~-~~~W~~~~~~~-~g~~G~~P~~yv~~ 63 (454)
T 1qcf_A 8 RIIVVALYDYEAIHHE-------DLSFQKGDQMVVLEE-SGEWWKARSLA-TRKEGYIPSNYVAR 63 (454)
T ss_dssp CCEEEESSCBCCCSTT-------BCCBCTTCEEEEEEC-CTTEEEEEETT-TCCEEEEEGGGEEE
T ss_pred CeEEEECcccCCcCCC-------cCcccCCCEEEEEec-CCCCeEEEECC-CCceEEecchhccc
Confidence 4568999999999887 999999999999998 47899999642 46899999999863
No 397
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=98.08 E-value=1.6e-06 Score=69.13 Aligned_cols=55 Identities=18% Similarity=0.331 Sum_probs=48.5
Q ss_pred cEEEEEEcCCChhhhcCCCCCCCEEEeECCccCCCHHHHHHHHHhc--CCceeeeeccC
Q psy4417 30 NLIIARILAGSLIDKQGVLKVGDVILGVNGENVSSPEDLQIEVVKS--DGNIQFTIAPQ 86 (440)
Q Consensus 30 ~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v~t~~e~~~~L~~~--~~~v~l~v~p~ 86 (440)
+++|..|.++|||+. | |+.||.|++|||.++.+.+++..+|... ++.+.|++...
T Consensus 2 Gv~V~~V~~~spA~~-G-L~~GD~I~~InG~~v~~~~~l~~~l~~~~~g~~v~l~v~R~ 58 (91)
T 2kjp_A 2 GIYASSVVENMPAKG-K-IEVGDKIISADGKNYQSAEKLIDYISSKKAGDKVTLKIERE 58 (91)
T ss_dssp CSSCCCCCCSSCCSS-C-CCSSCEEEEETTBCCSSHHHHHHHHSSCCSSCEECEEEESS
T ss_pred ceEEEEECCCChHHH-c-CCCCCEEEEECCEECCCHHHHHHHHHcCCCCCEEEEEEEEC
Confidence 467888999999999 9 9999999999999998899999999864 77888888764
No 398
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=98.07 E-value=1e-05 Score=69.13 Aligned_cols=56 Identities=21% Similarity=0.290 Sum_probs=49.5
Q ss_pred CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccCCCHHHHHHHHHhc--CCceeeeeccC
Q psy4417 29 GNLIIARILAGSLIDKQGVLKVGDVILGVNGENVSSPEDLQIEVVKS--DGNIQFTIAPQ 86 (440)
Q Consensus 29 ~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v~t~~e~~~~L~~~--~~~v~l~v~p~ 86 (440)
.+++|..|.++|||+ +| |+.||.|++|||.++.+.+++...|... ++.+.+++...
T Consensus 57 ~g~~V~~V~~~spA~-aG-L~~GD~I~~inG~~v~~~~~l~~~l~~~~~g~~v~l~v~R~ 114 (134)
T 2l97_A 57 SGVIVRSVQSNMPAN-GH-LEKYDVITKVDDKEIASSTDLQSALYNHSIGDTIKITYYRN 114 (134)
T ss_dssp SCEEEEECSTTSGGG-TT-SCSSCEEEEETTEECCCHHHHHHHHHHSSTTCEEEEEEEET
T ss_pred CCEEEEEECCCCchH-HC-CCCCCEEEEECCEEcCCHHHHHHHHHhCCCCCEEEEEEEEC
Confidence 468999999999999 99 9999999999999998889999888854 67888888653
No 399
>2lqn_A CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT10 oncogene homolog (avian)- signaling protein; NMR {Homo sapiens} PDB: 2lqw_A*
Probab=97.34 E-value=5e-07 Score=88.25 Aligned_cols=57 Identities=19% Similarity=0.391 Sum_probs=48.1
Q ss_pred cccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 97 VCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 97 ~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
..+++|+|||.|..++ +.+|+|++||++.|+++.+.+||.++. ++..|+||++|++.
T Consensus 237 ~~~~~alydy~~~~~~-----~~eLs~~~Gd~i~v~~~~~~gWw~g~~---~g~~G~fP~~yv~~ 293 (303)
T 2lqn_A 237 PVFAKAIQKRVPCAYD-----KTALALEVGDIVKVTRMNINGQWEGEV---NGRKGLFPFTHVKI 293 (303)
Confidence 4679999999875421 128999999999999999999999987 47899999999965
No 400
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=98.06 E-value=5.3e-06 Score=66.41 Aligned_cols=56 Identities=16% Similarity=0.311 Sum_probs=49.6
Q ss_pred CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccCCCHHHHHHHHHhc--CCceeeeeccC
Q psy4417 29 GNLIIARILAGSLIDKQGVLKVGDVILGVNGENVSSPEDLQIEVVKS--DGNIQFTIAPQ 86 (440)
Q Consensus 29 ~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v~t~~e~~~~L~~~--~~~v~l~v~p~ 86 (440)
.+++|..|.++|||+. | |+.||.|++|||.++.+..++..+|... ++.+.|.+...
T Consensus 5 ~Gv~V~~V~~~spA~~-G-L~~GD~Il~InG~~v~~~~~l~~~l~~~~~g~~v~l~v~R~ 62 (94)
T 2kl1_A 5 KGVYVMSVLPNMPAAG-R-LEAGDRIAAIDGQPINTSEQIVSYVREKQAGDRVRVTFIRD 62 (94)
T ss_dssp CCEECCCCCTTSTTBT-T-BCTTCEEEEETTBCCCCHHHHHHHHHHSCTTCCEEEEEEET
T ss_pred CcEEEEEECCCChHHh-C-CCCCCEEEEECCEECCCHHHHHHHHHhCCCCCEEEEEEEEC
Confidence 4589999999999999 8 9999999999999998889999999864 77888888754
No 401
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=98.01 E-value=1e-05 Score=64.91 Aligned_cols=55 Identities=20% Similarity=0.399 Sum_probs=47.8
Q ss_pred EEEEEcCCChhhhcCCCCCCCEEEeECCccCCCHHHHHHHHHhc-C-CceeeeeccCC
Q psy4417 32 IIARILAGSLIDKQGVLKVGDVILGVNGENVSSPEDLQIEVVKS-D-GNIQFTIAPQG 87 (440)
Q Consensus 32 ~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v~t~~e~~~~L~~~-~-~~v~l~v~p~~ 87 (440)
+|..|.++|||+++| |+.||.|++|||..+.+.+++...|... + +.+.+.+....
T Consensus 5 ~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~d~~~~l~~~~~~~~v~l~v~R~g 61 (95)
T 3id1_A 5 VVGEIAANSIAAEAQ-IAPGTELKAVDGIETPDWDAVRLQLVDKIGDESTTITVAPFG 61 (95)
T ss_dssp BEEEECTTSHHHHTT-CCTTCEEEEETTEECSSHHHHHHHHHHTTTCSEEEEEEECTT
T ss_pred EEEeeCCCCHHHHcC-CCCCCEEEEECCEECCCHHHHHHHHHHhcCCCcEEEEEEECC
Confidence 688999999999999 9999999999999999999999988744 3 57888887643
No 402
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=97.99 E-value=1.2e-05 Score=63.30 Aligned_cols=55 Identities=16% Similarity=0.289 Sum_probs=46.4
Q ss_pred cEEEEEEcCCChhhhcCCCCCCCEEEeECCccCCCHHHHHHHHHh--cCCceeeeecc
Q psy4417 30 NLIIARILAGSLIDKQGVLKVGDVILGVNGENVSSPEDLQIEVVK--SDGNIQFTIAP 85 (440)
Q Consensus 30 ~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v~t~~e~~~~L~~--~~~~v~l~v~p 85 (440)
++.|..+.|+|+|+++| |+.||.|++|||.++.+..++..++.. .++.+.+.+..
T Consensus 20 G~~V~~~~~~s~A~~aG-l~~GD~I~~ing~~v~~~~d~~~~~~~~~~g~~v~l~v~R 76 (87)
T 2i6v_A 20 GYRVSPGKDPVLFESIG-LQDGDMAVALNGLDLTDPNVMNTLFQSMNEMTEMSLTVER 76 (87)
T ss_dssp EEEEEECSCHHHHHHTT-CCTTCEEEEETTEETTCHHHHHHHHHTGGGCSEEEEEEEE
T ss_pred EEEEEeCCCCCHHHHCC-CCCCCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEEEEE
Confidence 35677788888889999 999999999999999999999888874 35678888854
No 403
>1ri9_A FYN-binding protein; SH3-like, helically extended, signaling protein; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=97.97 E-value=3.3e-06 Score=67.60 Aligned_cols=39 Identities=21% Similarity=0.270 Sum_probs=35.8
Q ss_pred cceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHH
Q psy4417 120 GLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELE 160 (440)
Q Consensus 120 ~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~ 160 (440)
+|+|++||+|.|++..+.+||.+|.. .+..|+||.++++
T Consensus 57 DLpfkkGE~LeVI~~~e~~wwLcRNs--~GkyGyVP~~yl~ 95 (102)
T 1ri9_A 57 DLQVKPGESLEVIQTTDDTKVLCRNE--EGKYGYVLRSYLA 95 (102)
T ss_dssp BCCCCTTCBCEEEEESSSSEEEEEET--TTEEEEEEGGGSC
T ss_pred cCCcCCCCEEEEEEeCCCCEEEEECC--CCCCCceeHHHhc
Confidence 89999999999999888899999985 4789999999986
No 404
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=97.95 E-value=1.5e-05 Score=65.78 Aligned_cols=55 Identities=20% Similarity=0.438 Sum_probs=48.7
Q ss_pred CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccCCCHHHHHHHHHhcCCceeeeecc
Q psy4417 29 GNLIIARILAGSLIDKQGVLKVGDVILGVNGENVSSPEDLQIEVVKSDGNIQFTIAP 85 (440)
Q Consensus 29 ~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v~t~~e~~~~L~~~~~~v~l~v~p 85 (440)
.+++|..|.++|||+++| |+.||.|++|||..+.+..++...|. .++.+.|.+..
T Consensus 35 ~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~l~-~g~~v~l~v~R 89 (112)
T 2p3w_A 35 SGIYVQEVAPNSPSQRGG-IQDGDIIVKVNGRPLVDSSELQEAVL-TESPLLLEVRR 89 (112)
T ss_dssp SSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCSHHHHHHHHH-HCSSEEEEEEE
T ss_pred CCeEEEEECCCChHHHCC-CCCCCEEEEECCEECCCHHHHHHHHh-CCCeEEEEEEE
Confidence 469999999999999999 99999999999999988899988884 46778888864
No 405
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=97.94 E-value=1.4e-06 Score=87.97 Aligned_cols=64 Identities=27% Similarity=0.589 Sum_probs=0.0
Q ss_pred CccEEEEecCCCcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcCCceeeeeccCC
Q psy4417 18 PCGLTVEQDANGNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSDGNIQFTIAPQG 87 (440)
Q Consensus 18 ~lGiti~~~~~~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~~~v~l~v~p~~ 87 (440)
.||+++.++ +|..|.++|+|+++| |++||+|++|||+++ .+++++..+|++.++.+.|++.|..
T Consensus 309 ~lG~~i~~g-----~I~~V~~gs~A~~aG-L~~GD~Il~VNg~~v~~~s~~~~~~~l~~~~~~v~L~V~p~~ 374 (388)
T 3suz_A 309 QLGFSVQNG-----IICSLMRGGIAERGG-VRVGHRIIEINGQSVVATAHEKIVQALSNSVGEIHMKTMPAA 374 (388)
T ss_dssp ------------------------------------------------------------------------
T ss_pred ccceEEecC-----EEEEeecCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEecc
Confidence 456665542 889999999999999 999999999999999 5789999999999999999998764
No 406
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=97.92 E-value=9.8e-06 Score=64.05 Aligned_cols=54 Identities=19% Similarity=0.327 Sum_probs=47.4
Q ss_pred EEEEEEcCCChhhhcCCCCCCCEEEeECCccCCCHHHHHHHHHhc-CCceeeeecc
Q psy4417 31 LIIARILAGSLIDKQGVLKVGDVILGVNGENVSSPEDLQIEVVKS-DGNIQFTIAP 85 (440)
Q Consensus 31 i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v~t~~e~~~~L~~~-~~~v~l~v~p 85 (440)
++|..|.++|||+++| |+.||.|++|||..+.+.+++...|... ++.+.+.+..
T Consensus 6 ~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~l~~~~g~~v~l~v~R 60 (91)
T 2zpm_A 6 PVLENVQPNSAASXAG-LQAGDRIVXVDGQPLTQWVTFVMLVRDNPGXSLALEIER 60 (91)
T ss_dssp CBCSEECTTSHHHHTT-CCTTCEEEEETTEECCCHHHHHHHHHHCTTCCEEEEEEE
T ss_pred eEEEEECCCChHHhcC-CCCCCEEEEECCeEcCCHHHHHHHHhcCCCCeEEEEEEE
Confidence 4688999999999999 9999999999999998899999888854 5677888854
No 407
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=97.90 E-value=5.4e-05 Score=66.84 Aligned_cols=64 Identities=23% Similarity=0.322 Sum_probs=53.3
Q ss_pred CCccEEEEecCCCcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHhcCCceeeeeccC
Q psy4417 17 SPCGLTVEQDANGNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVKSDGNIQFTIAPQ 86 (440)
Q Consensus 17 ~~lGiti~~~~~~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~~~~~v~l~v~p~ 86 (440)
..||+.+.. + +|..|.++|||+++| |+.||.|++|||.++ ....++...+.+.+..+.+.+.|.
T Consensus 100 ~~lG~~~~~----g-~v~~v~~~s~a~~aG-l~~GD~I~~ing~~v~~~~~~~v~~~v~r~g~~~~l~v~~~ 165 (166)
T 1w9e_A 100 GHVGFIFKN----G-KITSIVKDSSAARNG-LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMPA 165 (166)
T ss_dssp SCCSEEEET----T-EEEEECTTSHHHHTT-CCSSEEEEEETTEECTTCCHHHHHHHHHHSCSEEEEEEEEC
T ss_pred CcEeEEEeC----C-EEEEEccCCHHHHcC-CCCCCEEEEECCEECCCCChHHHHHHHhhCCCEEEEEEEEC
Confidence 457777662 2 899999999999999 999999999999999 567777777778888888888764
No 408
>3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative splicing, coiled coil, cytoplasmic vesicle, endocytosis, phosphoprotein, polymorphism; 2.78A {Homo sapiens}
Probab=97.89 E-value=1.6e-06 Score=90.16 Aligned_cols=56 Identities=29% Similarity=0.623 Sum_probs=0.0
Q ss_pred cccccccccCCCCCCCCCCCccccceeccCCEEEEeecC-CCCceEEEecCCCCCCccccchhHHH
Q psy4417 97 VCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQK-DPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 97 ~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~-d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
...++|+|||.+..++ +|+|.+||+|.|++.. +++||.++.. ++..|+||++|+..
T Consensus 428 ~~~~~alydy~~~~~~-------eLsf~~Gd~i~vl~~~~~~~Ww~g~~~--~g~~G~~P~nyv~~ 484 (486)
T 3haj_A 428 EVRVRALYDYEGQEHD-------ELSFKAGDELTKMEDEDEQGWCKGRLD--NGQVGLYPANYVEA 484 (486)
T ss_dssp ------------------------------------------------------------------
T ss_pred CeEEEEccccCCCCCC-------cCccCCCCEEEEEEecCCCCeeEEEeC--CCCEEEEeHHHcee
Confidence 4679999999998877 9999999999999976 4599999874 36799999999864
No 409
>1z6g_A Guanylate kinase; structural genomics, SGC, structural genom consortium, transferase; HET: EPE; 2.18A {Plasmodium falciparum}
Probab=97.88 E-value=2.6e-05 Score=72.11 Aligned_cols=111 Identities=28% Similarity=0.439 Sum_probs=78.2
Q ss_pred cchhhHHHHHhcCC-eEEeecCcchhhhhhhhhccccccccCCC-ceEEecCCCccceeecCCCcccchhhccCcccccc
Q psy4417 249 THLDSIREVILSGK-ICVLDCSPVGLFTFLLGLIEGTVTAKLIP-YTYSIPICSWSSFFASDTTRPMRELEENGQNYWFT 326 (440)
Q Consensus 249 ~~~~~i~~v~~~g~-~~il~~~~~g~~~l~~~l~~~~~~~~~~p-~~i~i~~~~~~~f~~~~ttr~~~~~e~~g~~y~f~ 326 (440)
.+++.|.=-+.+|. ++|++.+.+|..+|++.|.. +.| .+. +-.+.+||+++..+.+|.+|.|.
T Consensus 11 ~~l~~isl~i~~G~~~~lvGpsGsGKSTLl~~L~g------~~pG~i~---------~g~~~~~~~~~~~~~~~i~~~~~ 75 (218)
T 1z6g_A 11 SSGLVPRGSMNNIYPLVICGPSGVGKGTLIKKLLN------EFPNYFY---------FSVSCTTRKKREKEKEGVDYYFI 75 (218)
T ss_dssp -----------CCCCEEEECSTTSSHHHHHHHHHH------HSTTTEE---------ECCCEECSCCCSSCCBTTTBEEC
T ss_pred ccccCCceecCCCCEEEEECCCCCCHHHHHHHHHh------hCCCcEE---------EeecccCCCCCcccccCCeEEEC
Confidence 34555655567786 45666666666777665542 223 333 34567888887788899999999
Q ss_pred CHHHHHHHHHcCceeeEEEEcCccccccHHHHHHHHhcCCeeEecCCC
Q psy4417 327 SREVMERDIQDHKFLEYGEHNGHLYGTHLDSIREVILSGKICVLDCSP 374 (440)
Q Consensus 327 s~~~f~~~~~~~~fle~~~~~~~~yGt~~~~i~~~~~~~~~~i~~~~~ 374 (440)
+...|..++..++|++++++.++.||++.+.++++++.++.++++..+
T Consensus 76 ~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~i~~~l~~~~~~il~~~l 123 (218)
T 1z6g_A 76 DKTIFEDKLKNEDFLEYDNYANNFYGTLKSEYDKAKEQNKICLFEMNI 123 (218)
T ss_dssp CHHHHHHHHHTTCEEEEEEETTEEEEEEHHHHHHHHHTTCEEEEEECH
T ss_pred CHHHHHHhhhccchhhhhhcccccCCCcHHHHHHHHhCCCcEEEEecH
Confidence 999999999999999999999999999998999999999988776433
No 410
>2gtj_A FYN-binding protein; SH3, redox, signaling protein; NMR {Homo sapiens} PDB: 2gto_A
Probab=97.86 E-value=8.5e-06 Score=64.68 Aligned_cols=40 Identities=23% Similarity=0.534 Sum_probs=34.7
Q ss_pred cceeccCCEEEEeecCC--CCceEEEecCCCCCCccccchhHHH
Q psy4417 120 GLAFNHGDILQILNQKD--PNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 120 ~L~f~~GdIl~V~~~~d--~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
+|+|.+|++|.|+...+ ++||.||.. .+..|+||.++++-
T Consensus 43 dLp~~~GE~LeII~~~e~p~g~Wl~RN~--~G~~GyVp~~~v~v 84 (96)
T 2gtj_A 43 ELSFKQGEQIEIIRITDNPEGKWLGRTA--RGSYGYIKTTAVEI 84 (96)
T ss_dssp CCEECTTCCEEEEECTTCSSSCCEEECT--TCCBCCCCGGGEEE
T ss_pred cCCcCCCCEEEEEEccCCCCCeEEEECC--CCCCCccchhhEEE
Confidence 89999999999999654 679999974 58899999999753
No 411
>1gvn_B Zeta; postsegregational killing system, plasmid; 1.95A {Streptococcus pyogenes} SCOP: c.37.1.21 PDB: 3q8x_B*
Probab=97.84 E-value=1.6e-06 Score=83.84 Aligned_cols=183 Identities=11% Similarity=-0.001 Sum_probs=101.3
Q ss_pred hcccCCCcccccccccccccccccccccccccccCccccc-CCCCCCCCCccCCCcceecCHHHHHHhhhcCCeeEEE-E
Q psy4417 164 KAFVPPEADYVHKIGICGTRYIKQYNTLQYNSTLMSRSFP-DTTRPMRELEENGQNYWFTSREVMERDIQDHKFLEYG-E 241 (440)
Q Consensus 164 ~~~~~~~~~~~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ttr~~r~~e~~g~~y~fvs~~~f~~~i~~~~fle~~-~ 241 (440)
..+++.|++|+||+|++..+..+...... .++ +++|.++++ |..+++. |.++. +
T Consensus 34 ~livl~G~sGsGKSTla~~L~~~~~~~~~--------~Is~D~~R~~~~~--------------~~~~~~~--~~~~a~~ 89 (287)
T 1gvn_B 34 TAFLLGGQPGSGKTSLRSAIFEETQGNVI--------VIDNDTFKQQHPN--------------FDELVKL--YEKDVVK 89 (287)
T ss_dssp EEEEEECCTTSCTHHHHHHHHHHTTTCCE--------EECTHHHHTTSTT--------------HHHHHHH--HGGGCHH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHhCCCeE--------EEechHhHHhchh--------------hHHHHHH--ccchhhh
Confidence 35677899999999998876543211221 233 366665553 2222211 33332 3
Q ss_pred EcCCcccc-chhhHHHHHhcCCeEEeecCcchhh---hhhhhhccccccccCCCceEEecCCCccceeecCCCcccchhh
Q psy4417 242 HNGHLYGT-HLDSIREVILSGKICVLDCSPVGLF---TFLLGLIEGTVTAKLIPYTYSIPICSWSSFFASDTTRPMRELE 317 (440)
Q Consensus 242 ~~g~~yg~-~~~~i~~v~~~g~~~il~~~~~g~~---~l~~~l~~~~~~~~~~p~~i~i~~~~~~~f~~~~ttr~~~~~e 317 (440)
+.+++||+ ....+++.++.|+.+|++.+..+.. .++..+ .. .-++..+.+ |..|+.+. .+.
T Consensus 90 ~~~~~~~~~~~~~v~~~l~~g~~vIld~~~~~~~~~~~~~~~~-~~----~g~~~~~i~-------~~~p~~~~---~l~ 154 (287)
T 1gvn_B 90 HVTPYSNRMTEAIISRLSDQGYNLVIEGTGRTTDVPIQTATML-QA----KGYETKMYV-------MAVPKINS---YLG 154 (287)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCEEECCCCCCSHHHHHHHHHH-HT----TTCEEEEEE-------ECCCHHHH---HHH
T ss_pred hhhHHHHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHH-Hh----CCCcEEEEE-------EECCHHHH---HHH
Confidence 34677887 4567888889999999999998865 332211 11 112333333 66666622 110
Q ss_pred ccCccccccCHHHHHHHHHcCceeeEEEEcC-ccccccHHHHHHHHhcCCeeEecCCCcHHHHHHHHHHHHHHHHHhcCC
Q psy4417 318 ENGQNYWFTSREVMERDIQDHKFLEYGEHNG-HLYGTHLDSIREVILSGKICVLDCSPVEEDIKRTLEESACLQRSYERF 396 (440)
Q Consensus 318 ~~g~~y~f~s~~~f~~~~~~~~fle~~~~~~-~~yGt~~~~i~~~~~~~~~~i~~~~~s~e~l~~~l~~~~~~e~~~~~~ 396 (440)
. .+.+.+....| + ..++|+.+ +.+.+.+++..+.. +......
T Consensus 155 ~---------~~Rl~~R~~~g---------~l~~R~~~~e------------------~~~~i~~rl~~a~~-el~~~~~ 197 (287)
T 1gvn_B 155 T---------IERYETMYADD---------PMTARATPKQ------------------AHDIVVKNLPTNLE-TLHKTGL 197 (287)
T ss_dssp H---------HHHHHHHHHHC---------TTTCCCCCHH------------------HHHHHHHHHHHHHH-HHHHHTC
T ss_pred H---------HHHHHHHHHhC---------CCCCCCCCHH------------------HHHHHHHHHHHHHH-HHHcCCC
Confidence 0 00111111111 1 12344322 35566667766433 3345578
Q ss_pred ccEEEEcCCH--------HHHHHHHHHHHHhccC
Q psy4417 397 IDKVIVNEDF--------DETFRTVIELLDTLSN 422 (440)
Q Consensus 397 fd~vi~Nddl--------~~a~~~l~~~i~~~~~ 422 (440)
||++++||+. +.+...+.++|..+..
T Consensus 198 ~d~v~v~d~~g~~ly~~~~~~~~~~~~ii~~e~~ 231 (287)
T 1gvn_B 198 FSDIRLYNREGVKLYSSLETPSISPKETLEKELN 231 (287)
T ss_dssp CSCEEEECTTCCEEEETTTCTTSCHHHHHHHHHS
T ss_pred CCeEEEEeCCCCEeeccCCCCCcCHHHHHHHHHc
Confidence 9999999885 7777888888876554
No 412
>3eph_A TRNA isopentenyltransferase; transferase, alternative initiation, ATP-binding, cytoplasm, mitochondrion, nucleotide-binding, nucleus; 2.95A {Saccharomyces cerevisiae} PDB: 3epj_A 3epk_A* 3epl_A*
Probab=97.82 E-value=8.7e-07 Score=89.33 Aligned_cols=102 Identities=15% Similarity=0.126 Sum_probs=76.7
Q ss_pred cccCCCccccccccccccccccccccccccccc-CcccccCCCCCCCCCccCCCcceecCHHHHHHhhhcCCeeEEEEEc
Q psy4417 165 AFVPPEADYVHKIGICGTRYIKQYNTLQYNSTL-MSRSFPDTTRPMRELEENGQNYWFTSREVMERDIQDHKFLEYGEHN 243 (440)
Q Consensus 165 ~~~~~~~~~~gk~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ttr~~r~~e~~g~~y~fvs~~~f~~~i~~~~fle~~~~~ 243 (440)
.+++.||+++||+++...+..+....+...+.+ .-..+++||++|+++|.+|.+|||++..+|.+....+.|++++
T Consensus 4 ~i~i~GptgsGKttla~~La~~~~~~iis~Ds~QvYr~l~i~T~kp~~~E~~gv~hhlid~~~~~~~~s~~~F~~~a--- 80 (409)
T 3eph_A 4 VIVIAGTTGVGKSQLSIQLAQKFNGEVINSDSMQVYKDIPIITNKHPLQEREGIPHHVMNHVDWSEEYYSHRFETEC--- 80 (409)
T ss_dssp EEEEEECSSSSHHHHHHHHHHHHTEEEEECCTTTTBSSCTTTTTCCCGGGTTTCCEESCSCBCTTSCCCHHHHHHHH---
T ss_pred EEEEECcchhhHHHHHHHHHHHCCCeEeecCccceecccccccCCCCHHHHcCchhhcCCccChHhHhhHHHHHHHH---
Confidence 456789999999998776654332222110000 0146899999999999999999999999999988888888775
Q ss_pred CCccccchhhHHHHHhcCCeEEeecCcchh--hhhh
Q psy4417 244 GHLYGTHLDSIREVILSGKICVLDCSPVGL--FTFL 277 (440)
Q Consensus 244 g~~yg~~~~~i~~v~~~g~~~il~~~~~g~--~~l~ 277 (440)
...|+++.++|+++|| ++..|. +.|+
T Consensus 81 -------~~~i~~i~~~g~~pil-VGGTglYi~aLl 108 (409)
T 3eph_A 81 -------MNAIEDIHRRGKIPIV-VGGTHYYLQTLF 108 (409)
T ss_dssp -------HHHHHHHHTTTCEEEE-ECSCGGGGGGGG
T ss_pred -------HHHHHHHHhcCCCEEE-ECChHHHHHHHH
Confidence 6889999999999988 666673 4453
No 413
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=97.78 E-value=7.2e-05 Score=76.58 Aligned_cols=56 Identities=27% Similarity=0.424 Sum_probs=51.3
Q ss_pred cEEEEEEcCCChhhhcCCCCCCCEEEeECCccCCCHHHHHHHHHhcCCceeeeeccC
Q psy4417 30 NLIIARILAGSLIDKQGVLKVGDVILGVNGENVSSPEDLQIEVVKSDGNIQFTIAPQ 86 (440)
Q Consensus 30 ~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v~t~~e~~~~L~~~~~~v~l~v~p~ 86 (440)
+++|..|.++|||+++| |+.||.|++|||.++.+.+++.++|+..++.+.|.|...
T Consensus 364 gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~~~~l~~~~~~v~l~v~R~ 419 (436)
T 4a8c_A 364 GIKIDEVVKGSPAAQAG-LQKDDVIIGVNRDRVNSIAEMRKVLAAKPAIIALQIVRG 419 (436)
T ss_pred CEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCCHHHHHHHHHhCCCeEEEEEEEC
Confidence 58999999999999999 999999999999999999999999998777888888654
No 414
>3qwy_A Cell death abnormality protein 2; cell engulfment, signaling protein; 2.52A {Caenorhabditis elegans}
Probab=97.77 E-value=3.5e-06 Score=82.39 Aligned_cols=57 Identities=19% Similarity=0.311 Sum_probs=0.0
Q ss_pred cccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 97 VCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 97 ~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
..+.+|+|+|.+..++ +.+|+|++||++.|+...+++||.++. ++..|++|++|++.
T Consensus 247 ~~~a~alyd~~~~~~~-----~~ELs~~~Gd~i~v~~~~~~~ww~g~~---~g~~G~fP~~yv~~ 303 (308)
T 3qwy_A 247 PAKAKVTFDRVPNAYD-----PTQLRVKKGQTVLVTQKMSNGMYKAEL---DGQIGSVPHTYLRF 303 (308)
T ss_dssp -----------------------------------------------------------------
T ss_pred ccccccccccccccCC-----cccceeCCCCEEEEEEEcCCCcEEEEE---CCeeEEechHHeEE
Confidence 4678999999775431 129999999999999998899998877 47799999999864
No 415
>3exa_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacillus halodurans} PDB: 2qgn_A
Probab=97.76 E-value=8.2e-07 Score=86.62 Aligned_cols=102 Identities=13% Similarity=0.055 Sum_probs=73.6
Q ss_pred cccCCCccccccccccccccccccccccccccc-CcccccCCCCCCCCCccCCCcceecCHHHHHHhhhcCCeeEEEEEc
Q psy4417 165 AFVPPEADYVHKIGICGTRYIKQYNTLQYNSTL-MSRSFPDTTRPMRELEENGQNYWFTSREVMERDIQDHKFLEYGEHN 243 (440)
Q Consensus 165 ~~~~~~~~~~gk~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ttr~~r~~e~~g~~y~fvs~~~f~~~i~~~~fle~~~~~ 243 (440)
.+++.||+++||+++...+.++....+..-+.+ .-..++.+|++|+++|.+|.+|||++..+|.+....+.|
T Consensus 5 ~i~i~GptgsGKt~la~~La~~~~~~iis~Ds~QvYr~~~igTakp~~~E~~gvphhlid~~~~~e~~s~~~F------- 77 (322)
T 3exa_A 5 LVAIVGPTAVGKTKTSVMLAKRLNGEVISGDSMQVYRGMDIGTAKITAEEMDGVPHHLIDIKDPSESFSVADF------- 77 (322)
T ss_dssp EEEEECCTTSCHHHHHHHHHHTTTEEEEECCGGGGBTTCCTTTTCCCHHHHTTCCEESSSCBCTTSCCCHHHH-------
T ss_pred EEEEECCCcCCHHHHHHHHHHhCccceeecCcccceeeeeecCCCCCHHHHcCCCEEEeccCChhhhccHHHH-------
Confidence 456789999999998876654432222100000 015789999999999999999999998888876665554
Q ss_pred CCccccchhhHHHHHhcCCeEEeecCcchh--hhhh
Q psy4417 244 GHLYGTHLDSIREVILSGKICVLDCSPVGL--FTFL 277 (440)
Q Consensus 244 g~~yg~~~~~i~~v~~~g~~~il~~~~~g~--~~l~ 277 (440)
+....+.|+++.++|+++|| ++..|. +.|+
T Consensus 78 ---~~~a~~~i~~i~~~gk~pIl-VGGTglYi~aLl 109 (322)
T 3exa_A 78 ---QDLATPLITEIHERGRLPFL-VGGTGLYVNAVI 109 (322)
T ss_dssp ---HHHHHHHHHHHHHTTCEEEE-ESCCHHHHHHHH
T ss_pred ---HHHHHHHHHHHHhCCCcEEE-EcCcHHHHHHHH
Confidence 44457899999999999988 566673 5553
No 416
>2j41_A Guanylate kinase; GMP, GMK, transferase, ATP-binding, nucleotide- binding; HET: 5GP; 1.9A {Staphylococcus aureus}
Probab=97.75 E-value=0.00019 Score=64.71 Aligned_cols=103 Identities=31% Similarity=0.424 Sum_probs=78.5
Q ss_pred cCC-eEEeecCcchhhhhhhhhccccccccCCCceEEecCCCccceeecCCCcccchhhccCccccccCHHHHHHHHHcC
Q psy4417 260 SGK-ICVLDCSPVGLFTFLLGLIEGTVTAKLIPYTYSIPICSWSSFFASDTTRPMRELEENGQNYWFTSREVMERDIQDH 338 (440)
Q Consensus 260 ~g~-~~il~~~~~g~~~l~~~l~~~~~~~~~~p~~i~i~~~~~~~f~~~~ttr~~~~~e~~g~~y~f~s~~~f~~~~~~~ 338 (440)
+|. ++|++.+.+|..++++.|... +.|..- +....++|.+..++.+|..|.|.+.+.|..++..+
T Consensus 5 ~g~~i~l~G~~GsGKSTl~~~L~~~-----~~~~~~---------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (207)
T 2j41_A 5 KGLLIVLSGPSGVGKGTVRKRIFED-----PSTSYK---------YSISMTTRQMREGEVDGVDYFFKTRDAFEALIKDD 70 (207)
T ss_dssp CCCEEEEECSTTSCHHHHHHHHHHC-----TTCCEE---------CCCCEECSCCCTTCCBTTTBEECCHHHHHHHHHTT
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHh-----hCCCeE---------EecccccCCCCCCccCCCceEEcCHHHHHHHHHcC
Confidence 454 455666666767776655322 223221 23356677777778889999999999999999999
Q ss_pred ceeeEEEEcCccccccHHHHHHHHhcCCeeEecCCCcH
Q psy4417 339 KFLEYGEHNGHLYGTHLDSIREVILSGKICVLDCSPVE 376 (440)
Q Consensus 339 ~fle~~~~~~~~yGt~~~~i~~~~~~~~~~i~~~~~s~ 376 (440)
.++++..+.++.||++.+.++..++.|+.++++.++..
T Consensus 71 ~~~~~~~~~~~~~g~~~~~i~~~l~~g~~vv~d~~~~~ 108 (207)
T 2j41_A 71 QFIEYAEYVGNYYGTPVQYVKDTMDEGHDVFLEIEVEG 108 (207)
T ss_dssp CEEEEEEETTEEEEEEHHHHHHHHHTTCEEEEECCGGG
T ss_pred CeEEEEeECCeecCCCHHHHHHHHHcCCeEEEEECHHH
Confidence 99999999999999999999999999999999887543
No 417
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=97.73 E-value=7.4e-05 Score=73.14 Aligned_cols=57 Identities=14% Similarity=0.284 Sum_probs=51.0
Q ss_pred CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccCCCHHHHHHHHHh--cCCceeeeeccC
Q psy4417 29 GNLIIARILAGSLIDKQGVLKVGDVILGVNGENVSSPEDLQIEVVK--SDGNIQFTIAPQ 86 (440)
Q Consensus 29 ~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v~t~~e~~~~L~~--~~~~v~l~v~p~ 86 (440)
.+++|..|.++|||+++| |+.||.|++|||.++.+..++..+|+. .++.+.|++...
T Consensus 244 ~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~l~~~l~~~~~g~~v~l~v~R~ 302 (318)
T 1te0_A 244 QGIVVNEVSPDGPAANAG-IQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVVVMRD 302 (318)
T ss_dssp CCEEEEEECTTSTTTTTC-CCTTCCEEEETTEECCCHHHHHHHHHTSCTTCEEEEEEESS
T ss_pred CcEEEEEeCCCChHHHCC-CCCCCEEEEECCEEcCCHHHHHHHHHhcCCCCEEEEEEEEC
Confidence 468999999999999999 999999999999999889999999985 467888888754
No 418
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=97.71 E-value=5.6e-05 Score=61.56 Aligned_cols=54 Identities=17% Similarity=0.292 Sum_probs=44.9
Q ss_pred EEEEEEcCCChhhhcCCCCCCCEEEeECCccCCCHHHHHHHHHh--cCCceeeeecc
Q psy4417 31 LIIARILAGSLIDKQGVLKVGDVILGVNGENVSSPEDLQIEVVK--SDGNIQFTIAP 85 (440)
Q Consensus 31 i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v~t~~e~~~~L~~--~~~~v~l~v~p 85 (440)
+.|..+.|+|+|+++| |+.||.|++|||.++.+..++..++.. .++.+.|.+..
T Consensus 39 ~~V~~~~pas~A~~aG-l~~GDvI~~ing~~v~~~~d~~~~~~~~~~g~~v~l~v~R 94 (105)
T 2i4s_A 39 YRVSPGKDPVLFESIG-LQDGDMAVALNGLDLTDPNVMNTLFQSMNEMTEMSLTVER 94 (105)
T ss_dssp EEEEECSCTHHHHHHT-CCTTCEEEEETTEETTSTTHHHHHHHHHTTCSEEEEEEEE
T ss_pred EEEecCCCCCHHHHcC-CCCCCEEEEECCEECCCHHHHHHHHHhcCCCCeEEEEEEE
Confidence 4567777777889999 999999999999999888888888874 46678888854
No 419
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=97.67 E-value=0.0001 Score=62.20 Aligned_cols=54 Identities=24% Similarity=0.252 Sum_probs=47.7
Q ss_pred CCcEEEEEEcCCChhhhcCCCCCCCEEEeECCccCCCHHHHHHHHHh--cCCceeeee
Q psy4417 28 NGNLIIARILAGSLIDKQGVLKVGDVILGVNGENVSSPEDLQIEVVK--SDGNIQFTI 83 (440)
Q Consensus 28 ~~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v~t~~e~~~~L~~--~~~~v~l~v 83 (440)
..+++|..|.++|||+++ |+.||.|++|||..+.+..++...|.. .++.+.+++
T Consensus 24 ~~gv~V~~V~~~spA~~a--L~~GD~Il~InG~~v~~~~dl~~~l~~~~~g~~v~l~V 79 (125)
T 2hga_A 24 PDGVQIDSVVPGSPASKV--LTPGLVIESINGMPTSNLTTYSAALKTISVGEVINITT 79 (125)
T ss_dssp CCCEEEEEECSSSGGGGT--SCTTCEEEEETTEECSSHHHHHHHHTTCCTTCEEEEEE
T ss_pred CCceEEEEECCCChHHHh--cCCCCEEEEECCEEcCCHHHHHHHHHhcCCCCEEEEEE
Confidence 467999999999999997 999999999999999989999988874 467788887
No 420
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=97.66 E-value=0.00011 Score=72.15 Aligned_cols=67 Identities=21% Similarity=0.330 Sum_probs=56.9
Q ss_pred CccEEEEecC-CCcEEEEEEcCCChhhhcCCCCCCCEEEeECCccCCCHHHHHHHHHh--cCCceeeeecc
Q psy4417 18 PCGLTVEQDA-NGNLIIARILAGSLIDKQGVLKVGDVILGVNGENVSSPEDLQIEVVK--SDGNIQFTIAP 85 (440)
Q Consensus 18 ~lGiti~~~~-~~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v~t~~e~~~~L~~--~~~~v~l~v~p 85 (440)
.||+.+.... ..+++|..|.++|||+++| |+.||.|++|||..+.+..++..+|.. .++.+.|+|..
T Consensus 230 ~lGi~~~~~~~~~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~l~~~l~~~~~g~~v~l~v~R 299 (324)
T 1y8t_A 230 SLGVQVTNDKDTLGAKIVEVVAGGAAANAG-VPKGVVVTKVDDRPINSADALVAAVRSKAPGATVALTFQD 299 (324)
T ss_dssp ECCEEEESCSSSSSEEEEEECTTSTTTTTT-CCTTCEEEEETTEECCSHHHHHHHHHTSCTTCEEEEEEEC
T ss_pred ccceEeeeccCCCceEEEEECCCChHHHcC-CCCCCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEEEEE
Confidence 5788876432 3569999999999999999 999999999999999888999988874 46788888865
No 421
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=97.64 E-value=9.8e-05 Score=73.21 Aligned_cols=57 Identities=23% Similarity=0.448 Sum_probs=51.4
Q ss_pred CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccCCCHHHHHHHHHh--cCCceeeeeccC
Q psy4417 29 GNLIIARILAGSLIDKQGVLKVGDVILGVNGENVSSPEDLQIEVVK--SDGNIQFTIAPQ 86 (440)
Q Consensus 29 ~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v~t~~e~~~~L~~--~~~~v~l~v~p~ 86 (440)
.+++|..|.++|||+++| |+.||.|++|||..+.+..++..+|.. .++.+.|+|...
T Consensus 263 ~G~~V~~V~~~spA~~aG-L~~GDvI~~ing~~v~~~~~l~~~l~~~~~g~~v~l~v~R~ 321 (345)
T 3stj_A 263 RGAFVSEVLPGSGSAKAG-VKAGDIITSLNGKPLNSFAELRSRIATTEPGTKVKLGLLRN 321 (345)
T ss_dssp SSEEEEEECTTSHHHHHT-CCTTCEECEETTEECSCHHHHHHHHHTSCTTCEEEEEEEET
T ss_pred ceEEEEEeccCChHHHcC-CCCCCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEEEEEC
Confidence 458999999999999999 999999999999999999999999975 478888888764
No 422
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=97.63 E-value=9.5e-05 Score=75.99 Aligned_cols=56 Identities=16% Similarity=0.234 Sum_probs=51.1
Q ss_pred cEEEEEEcCCChhhhcCCCCCCCEEEeECCccCCCHHHHHHHHHhcCCceeeeeccC
Q psy4417 30 NLIIARILAGSLIDKQGVLKVGDVILGVNGENVSSPEDLQIEVVKSDGNIQFTIAPQ 86 (440)
Q Consensus 30 ~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v~t~~e~~~~L~~~~~~v~l~v~p~ 86 (440)
+++|..|.++|||+++| |+.||.|++|||.++.+.+++.++|+..++.+.|.|...
T Consensus 387 Gv~V~~V~~gspA~~aG-L~~GD~I~~Vng~~v~~~~~~~~~l~~~~~~v~l~v~R~ 442 (451)
T 3pv2_A 387 GVQVVGASENSAGWRAG-IRPGDIIISANKKPVTDVKSLQTIAQEKKKELLVQVLRG 442 (451)
T ss_dssp EEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCSHHHHHHHTTSSCSCEEEEEEET
T ss_pred ceEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCHHHHHHHHhcCCCeEEEEEEEC
Confidence 47999999999999999 999999999999999999999999998778888888653
No 423
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=97.61 E-value=8.6e-05 Score=68.22 Aligned_cols=66 Identities=15% Similarity=0.203 Sum_probs=54.5
Q ss_pred CccEEEEec-----CCCcEEEEEEcCCChhhhcCCCCC-CCEEEeECCccCCCHHHHHHHHHhc-CCceeeeecc
Q psy4417 18 PCGLTVEQD-----ANGNLIIARILAGSLIDKQGVLKV-GDVILGVNGENVSSPEDLQIEVVKS-DGNIQFTIAP 85 (440)
Q Consensus 18 ~lGiti~~~-----~~~~i~V~~V~~gs~A~~~G~L~~-GD~Il~VNg~~v~t~~e~~~~L~~~-~~~v~l~v~p 85 (440)
.||+++..- ...+++|..|.++|||+++| |+. ||.|++|||. +.+.+++..+|+.. ++.+.|.+..
T Consensus 96 ~lGi~~~~~~~~~~~~~Gv~V~~V~~~spA~~aG-l~~~GD~I~~ing~-v~~~~~l~~~l~~~~g~~v~l~v~r 168 (209)
T 3rle_A 96 LLGVSIRFCSFDGANENVWHVLEVESNSPAALAG-LRPHSDYIIGADTV-MNESEDLFSLIETHEAKPLKLYVYN 168 (209)
T ss_dssp SSCEEEEEEECTTGGGSCEEEEEECTTSHHHHHT-CCTTTEEEEEESSC-CCSSSCHHHHHHHTTTSCEEEEEEE
T ss_pred ccceEEeecChhHccccceEEEEeCCCChHHHCC-CCCCCCEEEECCCE-eCCHHHHHHHHHhCCCCeEEEEEEE
Confidence 578887631 12568999999999999999 999 9999999998 88888888888864 6778888854
No 424
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=97.60 E-value=0.00013 Score=73.45 Aligned_cols=68 Identities=24% Similarity=0.400 Sum_probs=56.5
Q ss_pred CccEEEEec-C-CCcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC--CCHHHHHHHHHh-cCCceeeeeccC
Q psy4417 18 PCGLTVEQD-A-NGNLIIARILAGSLIDKQGVLKVGDVILGVNGENV--SSPEDLQIEVVK-SDGNIQFTIAPQ 86 (440)
Q Consensus 18 ~lGiti~~~-~-~~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v--~t~~e~~~~L~~-~~~~v~l~v~p~ 86 (440)
++|+.+... . +++++|..|.++|||+++| |+.||.|++|||.++ .+.+++..+|+. .+..+.|+|...
T Consensus 86 giG~~~~~~~~~~~~~~V~~v~~~spA~~aG-l~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~r~ 158 (388)
T 1fc6_A 86 GVGLEITYDGGSGKDVVVLTPAPGGPAEKAG-ARAGDVIVTVDGTAVKGMSLYDVSDLLQGEADSQVEVVLHAP 158 (388)
T ss_dssp BCSEEEEECTTCSSCEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHCBSTTCEEEEEEEET
T ss_pred EEEEEEEEeecCCCcEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCCCCEEEEEEEeC
Confidence 689998764 2 4679999999999999999 999999999999999 446888888874 466788888654
No 425
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=97.58 E-value=4.9e-05 Score=69.40 Aligned_cols=59 Identities=34% Similarity=0.712 Sum_probs=50.8
Q ss_pred CCccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHHh
Q psy4417 94 IKPVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEER 162 (440)
Q Consensus 94 ~~~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~r 162 (440)
++....++++|+|++..+. +|+|++||++.|.+..+.+||.+.. .+..|++|+++..++
T Consensus 11 p~~~~~~~al~d~~~~~~~-------el~~~~Gd~~~v~~~~~~~w~~~~~---~g~~gl~p~~~v~~~ 69 (222)
T 3ehr_A 11 PGQVKVFRALYTFEPRTPD-------ELYIEEGDIIYITDMSDTNWWKGTS---KGRTGLIPSNYVAEQ 69 (222)
T ss_dssp --CCEEEEESSCCCCSSTT-------BCCCCTTCEEEEEECCSSSEEEEEE---TTEEEEEEHHHHHHH
T ss_pred CCCceEEEEeCCcCCCCCC-------cccccCCCEEEEeccccchhHhccc---CCcceeechhhcccc
Confidence 3445678999999999887 9999999999999999999999988 467899999998765
No 426
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=97.55 E-value=9.1e-05 Score=78.70 Aligned_cols=67 Identities=10% Similarity=0.188 Sum_probs=56.2
Q ss_pred CCccEEEEecCCCcEEEEEEcCCChhhhcCCCCCCCEEEeECCccCCCHHHHHHHHHh--cCCceeeeeccC
Q psy4417 17 SPCGLTVEQDANGNLIIARILAGSLIDKQGVLKVGDVILGVNGENVSSPEDLQIEVVK--SDGNIQFTIAPQ 86 (440)
Q Consensus 17 ~~lGiti~~~~~~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v~t~~e~~~~L~~--~~~~v~l~v~p~ 86 (440)
..||+++... .++++|..|.++|||+++| |+.||+|++|||..+ +.+++..+|+. .++.+.|+|...
T Consensus 485 ~~lG~~~~~~-~~gv~V~~V~~~spA~~AG-L~~GD~I~aInG~~v-~~~~l~~~l~~~~~g~~v~l~v~R~ 553 (597)
T 4fgm_A 485 VNFGAKYKAS-PQGLDVLNVYHDESAYHAG-LSAGDKIIAIDHLQA-TEQSVKRILERYIPGDTVTIHAFRR 553 (597)
T ss_dssp CCCSEEEEEE-TTEEEEEEECTTSHHHHHT-CCTTCEEEEETTEEC-CTTTHHHHHTTCCTTCEEEEEEEET
T ss_pred cccceEEecc-CCeEEEEEeCCCChHHHCC-CCCCCEEEEECCEEC-CHHHHHHHHHhcCCCCEEEEEEEEC
Confidence 3789998763 4579999999999999999 999999999999999 46778888874 467888888654
No 427
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=97.45 E-value=9.6e-05 Score=67.91 Aligned_cols=57 Identities=18% Similarity=0.246 Sum_probs=45.0
Q ss_pred CcEEEEEEcCCChhhhcCCCCCC-CEEEeECCccCCCHHHHHH-HHH-hcCCceeeeeccC
Q psy4417 29 GNLIIARILAGSLIDKQGVLKVG-DVILGVNGENVSSPEDLQI-EVV-KSDGNIQFTIAPQ 86 (440)
Q Consensus 29 ~~i~V~~V~~gs~A~~~G~L~~G-D~Il~VNg~~v~t~~e~~~-~L~-~~~~~v~l~v~p~ 86 (440)
.+++|..|.++|||+++| |+.| |.|++|||..+.+..++.. ++. ..++.+.|++...
T Consensus 16 ~G~~V~~V~~~SpA~~AG-L~~G~D~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~ 75 (209)
T 3rle_A 16 EGYHVLRVQENSPGHRAG-LEPFFDFIVSINGSRLNKDNDTLKDLLKANVEKPVKMLIYSS 75 (209)
T ss_dssp EEEEEEEECTTSHHHHTT-CCTTTEEEEEETTEECCSSSSHHHHHHHHTTTSCEEEEEEET
T ss_pred CEEEEEEECCCCHHHHCC-CCcCCeEEEEECCEECcCHHHHHHHHHhcCCCCEEEEEEEec
Confidence 459999999999999999 9999 9999999999955444443 333 3467888888653
No 428
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=97.44 E-value=0.00011 Score=74.23 Aligned_cols=69 Identities=19% Similarity=0.247 Sum_probs=53.8
Q ss_pred CCCccEEEEecCC--C--cEEEEEEcCCChhhhcCCCCCCCEEEeECCccCCCHHHHHHHHHhcCCceeeeeccC
Q psy4417 16 LSPCGLTVEQDAN--G--NLIIARILAGSLIDKQGVLKVGDVILGVNGENVSSPEDLQIEVVKSDGNIQFTIAPQ 86 (440)
Q Consensus 16 g~~lGiti~~~~~--~--~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v~t~~e~~~~L~~~~~~v~l~v~p~ 86 (440)
..++|+++....+ . .++|..|.++|||+++| |+.||.|++|||..+.+.+ +..+|+..+..++|.+...
T Consensus 73 ~~G~~~~l~~~~~~~~~~~~~V~~V~~gsPA~~AG-L~~GD~I~~InG~~v~~~~-~~~~l~~~g~~v~l~v~R~ 145 (403)
T 3k50_A 73 SYGFDYTLYKVLDNDTAYNALISYVVPGSPAEEAG-LQRGHWIMMMNGDYITKKV-ESELLQGSTRQLQIGVYKE 145 (403)
T ss_dssp BCSEEEEEEECTTCSSCEEEEEEEECTTSHHHHTT-CCTTCEEEEETTBCBCTTT-GGGGTSCSCEEEEEEEEEE
T ss_pred ccceEEEEEEcCCCCcceeEEEEEeCCCChHHHcC-CCCCCEEEEECCEEccchh-HHHHhhCCCCEEEEEEEeC
Confidence 4577888776443 2 27899999999999999 9999999999999995443 5566666666788888654
No 429
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=97.43 E-value=0.00019 Score=70.46 Aligned_cols=56 Identities=27% Similarity=0.465 Sum_probs=50.0
Q ss_pred CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccCCCHHHHHHHHHhcCCceeeeeccC
Q psy4417 29 GNLIIARILAGSLIDKQGVLKVGDVILGVNGENVSSPEDLQIEVVKSDGNIQFTIAPQ 86 (440)
Q Consensus 29 ~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v~t~~e~~~~L~~~~~~v~l~v~p~ 86 (440)
.+++|..|.++|||+++| |+.||.|++|||..+.+.+++..+|+. ++.+.|.+...
T Consensus 256 ~gv~V~~V~~~spA~~aG-l~~GDvI~~ing~~v~~~~~l~~~l~~-~~~v~l~v~R~ 311 (325)
T 1lcy_A 256 HGVLIHKVILGSPAHRAG-LRPGDVILAIGEQMVQNAEDVYEAVRT-QSQLAVQIRRG 311 (325)
T ss_dssp SCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCSHHHHHHHHTT-CSSEEEEEEET
T ss_pred CCeEEEEeCcCChHHHCC-CCCCCEEEEECCEEcCCHHHHHHHHhC-CCeEEEEEEEC
Confidence 469999999999999999 999999999999999999999998876 57788887653
No 430
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=97.39 E-value=0.00018 Score=71.38 Aligned_cols=68 Identities=22% Similarity=0.342 Sum_probs=55.5
Q ss_pred CccEEEEecCC------CcEEEEEEcCCChhhhcCCCCC-----------CCEEEeECCccCCCHHHHHHHHHh--cCCc
Q psy4417 18 PCGLTVEQDAN------GNLIIARILAGSLIDKQGVLKV-----------GDVILGVNGENVSSPEDLQIEVVK--SDGN 78 (440)
Q Consensus 18 ~lGiti~~~~~------~~i~V~~V~~gs~A~~~G~L~~-----------GD~Il~VNg~~v~t~~e~~~~L~~--~~~~ 78 (440)
-||+++..... .+++|..|.++|||+++| |+. ||.|++|||.++.+.+++..+|.. .++.
T Consensus 234 ~lGi~~~~~~~~~~~~~~Gv~V~~V~~~spA~~AG-l~~~~~~~~~~l~~GDvI~~ing~~v~~~~dl~~~l~~~~~g~~ 312 (348)
T 3qo6_A 234 ILGIKFAPDQSVEQLGVSGVLVLDAPPSGPAGKAG-LQSTKRDGYGRLVLGDIITSVNGTKVSNGSDLYRILDQCKVGDE 312 (348)
T ss_dssp ECCCEECCTTTTTTTTCSSEEEEECCSSSHHHHHT-CCCCEECSSSCEECCCEECEETTBCCSSSHHHHHHHTTCCTTCE
T ss_pred ecCcEEccchhhhhcCCceEEEEEecCCChHHHcC-CccccccccCCCCCCCEEEEECCEEeCCHHHHHHHHHhCCCcCE
Confidence 35666643221 469999999999999999 998 999999999999888999999864 3678
Q ss_pred eeeeeccC
Q psy4417 79 IQFTIAPQ 86 (440)
Q Consensus 79 v~l~v~p~ 86 (440)
+.|+|...
T Consensus 313 v~l~v~R~ 320 (348)
T 3qo6_A 313 VTVEVLRG 320 (348)
T ss_dssp EEEEEECS
T ss_pred EEEEEEEC
Confidence 89988754
No 431
>3pvl_A Myosin VIIA isoform 1; protein complex, novel folding, protein cargo binding, cargo proteins, motor protein-protein transport complex; 2.80A {Mus musculus}
Probab=97.36 E-value=3.7e-05 Score=82.46 Aligned_cols=58 Identities=21% Similarity=0.274 Sum_probs=46.5
Q ss_pred CccccccccccCC---CCCCCCCCCccccceeccCCEEEEeec-----CCCCceEEEecCCCCCCccccchhHH
Q psy4417 95 KPVCYMRCLFTYD---PKEDSLLPCKEIGLAFNHGDILQILNQ-----KDPNWWQAQLIEPTGPMGLVPSQELE 160 (440)
Q Consensus 95 ~~~~~vRal~dy~---p~~d~~~p~~e~~L~f~~GdIl~V~~~-----~d~~ww~a~~~~~~~~~G~iPs~~~~ 160 (440)
+.+.|+.|++||. +.+.+ .|+|++||++.+++. .+.+||.++... ++..|++|.+++.
T Consensus 571 ~rs~~~~Al~d~~~~~~~~~~-------~L~f~kGDlI~l~~~~~~~~~~~~W~~G~~~~-~g~~G~fP~~~V~ 636 (655)
T 3pvl_A 571 KRSKYVVALQDNPNPAGEESG-------FLSFAKGDLIILDHDTGEQVMNSGWANGINER-TKQRGDFPTDCVY 636 (655)
T ss_dssp HHCCEEEESSCCCC-----CC-------BCCCCTTCEEEESSCCHHHHHHSSEEEEEETT-TCCEEEEEGGGEE
T ss_pred hcchhhhHHhhcccCCCCCCC-------cccccCCCEEEEccccCcccCCCCeEEEEeCC-CCceEEeEhhhEE
Confidence 3578999999998 33333 899999999999987 478999999632 5889999999984
No 432
>3foz_A TRNA delta(2)-isopentenylpyrophosphate transferas; nucleoside modification, isopentenyl-tRNA transferase, transferase-RNA complex; 2.50A {Escherichia coli k-12} PDB: 2zxu_A* 2zm5_A
Probab=97.35 E-value=5e-06 Score=80.98 Aligned_cols=101 Identities=11% Similarity=-0.025 Sum_probs=72.2
Q ss_pred cccCCCccccccccccccccccccccccccccc-CcccccCCCCCCCCCccCCCcceecCHHHHHHhhhcCCeeEEEEEc
Q psy4417 165 AFVPPEADYVHKIGICGTRYIKQYNTLQYNSTL-MSRSFPDTTRPMRELEENGQNYWFTSREVMERDIQDHKFLEYGEHN 243 (440)
Q Consensus 165 ~~~~~~~~~~gk~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ttr~~r~~e~~g~~y~fvs~~~f~~~i~~~~fle~~~~~ 243 (440)
.+++.||+++||+++...+.++....+..-+.+ .-..++.+|++|+++|.+|.+|||++..+|.+....+.|
T Consensus 12 ~i~i~GptgsGKt~la~~La~~~~~~iis~Ds~qvY~~~~igTakp~~~E~~~v~hhlid~~~~~e~~s~~~f------- 84 (316)
T 3foz_A 12 AIFLMGPTASGKTALAIELRKILPVELISVDSALIYKGMDIGTAKPNAEELLAAPHRLLDIRDPSQAYSAADF------- 84 (316)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHSCEEEEECCTTTTBTTCCTTTTCCCHHHHHHSCEETSSCBCTTSCCCHHHH-------
T ss_pred EEEEECCCccCHHHHHHHHHHhCCCcEEecccccccccccccCCCCCHHHHcCCCEEEeccCCccccccHHHH-------
Confidence 466789999999998876654432222110000 015789999999999999999999998888776555444
Q ss_pred CCccccchhhHHHHHhcCCeEEeecCcchh--hhh
Q psy4417 244 GHLYGTHLDSIREVILSGKICVLDCSPVGL--FTF 276 (440)
Q Consensus 244 g~~yg~~~~~i~~v~~~g~~~il~~~~~g~--~~l 276 (440)
+......|+++.++|+++|| ++..|. +.|
T Consensus 85 ---~~~a~~~i~~i~~~g~~pil-VGGTglYi~al 115 (316)
T 3foz_A 85 ---RRDALAEMADITAAGRIPLL-VGGTMLYFKAL 115 (316)
T ss_dssp ---HHHHHHHHHHHHHTTCEEEE-EESCHHHHHHH
T ss_pred ---HHHHHHHHHHHHhCCCcEEE-EcCcHHHHHHH
Confidence 45566889999999999987 566673 445
No 433
>3pe0_A Plectin; cytoskeleton, plakin, spectrin repeat, SH3, structural prote intermediate filament, crosslinking; 2.95A {Homo sapiens}
Probab=97.31 E-value=0.00011 Score=70.87 Aligned_cols=55 Identities=18% Similarity=0.340 Sum_probs=45.2
Q ss_pred CCccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHH
Q psy4417 94 IKPVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELE 160 (440)
Q Consensus 94 ~~~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~ 160 (440)
...+..|+|+|||.+. +++|.+||++.++++++++||.++.. +|..|+|||+++.
T Consensus 195 ~~~~~~v~al~dy~~~----------e~~~~kge~~~l~~~s~~~wW~v~~~--~G~~g~vPs~~~~ 249 (283)
T 3pe0_A 195 MRGRLPLLAVCDYKQV----------EVTVHKGDECQLVGPAQPSHWKVLSS--SGSEAAVPSVCFL 249 (283)
T ss_dssp CSSCEEEEECSCEECS----------SCEECTTCEEEEEEECSTTEEEEECC-----EEEEEGGGEE
T ss_pred cCCCceEEeecCccCC----------cccccCCCEEEEeeCCCCCceEEEcC--CCCEeeccceEEe
Confidence 3456789999999763 68999999999999999999999863 4678999999984
No 434
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=97.21 E-value=0.00047 Score=70.79 Aligned_cols=57 Identities=14% Similarity=0.360 Sum_probs=50.6
Q ss_pred CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccCCCHHHHHHHHHh--cCCceeeeeccC
Q psy4417 29 GNLIIARILAGSLIDKQGVLKVGDVILGVNGENVSSPEDLQIEVVK--SDGNIQFTIAPQ 86 (440)
Q Consensus 29 ~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v~t~~e~~~~L~~--~~~~v~l~v~p~ 86 (440)
.+++|..|.++|||+++| |+.||.|++|||..+.+..++..++.. .++.+.|+|...
T Consensus 282 ~G~~V~~V~~~spA~~aG-L~~GDvI~~vnG~~v~~~~~l~~~l~~~~~g~~v~l~V~R~ 340 (451)
T 3pv2_A 282 QGALVSQVNPNSPAELAG-LKAGDIITQINDTKITQATQVKTTISLLRVGSTVKIIVERD 340 (451)
T ss_dssp CCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCSHHHHHHHHHTSCTTCEEEEEEEET
T ss_pred ceEEEEecCCCChHHHcC-CCCCCEEEEECCEEcCCHHHHHHHHHhcCCCCEEEEEEEEC
Confidence 468999999999999999 999999999999999989999988874 467788888653
No 435
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=97.19 E-value=0.00049 Score=70.31 Aligned_cols=57 Identities=23% Similarity=0.448 Sum_probs=50.1
Q ss_pred CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccCCCHHHHHHHHHh--cCCceeeeeccC
Q psy4417 29 GNLIIARILAGSLIDKQGVLKVGDVILGVNGENVSSPEDLQIEVVK--SDGNIQFTIAPQ 86 (440)
Q Consensus 29 ~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v~t~~e~~~~L~~--~~~~v~l~v~p~ 86 (440)
.+++|..|.++|||+++| |+.||+|++|||..+.+.+++..++.. .++.+.|++...
T Consensus 263 ~G~~V~~V~~~spA~~aG-L~~GD~I~~vnG~~v~~~~~l~~~l~~~~~g~~v~l~v~R~ 321 (436)
T 4a8c_A 263 RGAFVSEVLPGSGSAKAG-VKAGDIITSLNGKPLNSFAELRSRIATTEPGTKVKLGLLRN 321 (436)
T ss_pred cceEEEEECCCChHHHCC-CCCCCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEEEEEC
Confidence 458999999999999999 999999999999999888999888874 367888888753
No 436
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=96.91 E-value=0.00017 Score=74.09 Aligned_cols=57 Identities=23% Similarity=0.395 Sum_probs=0.0
Q ss_pred CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccCCCHHHHHHHHHhcCCceeeeeccC
Q psy4417 29 GNLIIARILAGSLIDKQGVLKVGDVILGVNGENVSSPEDLQIEVVKSDGNIQFTIAPQ 86 (440)
Q Consensus 29 ~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v~t~~e~~~~L~~~~~~v~l~v~p~ 86 (440)
.+++|..|.++|||+++| |+.||.|++|||..+.+.+++..+|+...+.+.|.|...
T Consensus 383 ~gv~V~~V~~gspA~~aG-L~~GDiI~~vng~~v~~~~~l~~~l~~~~~~v~l~v~R~ 439 (448)
T 1ky9_A 383 QGVVVNNVKTGTPAAQIG-LKKGDVIIGANQQAVKNIAELRKVLDSKPSVLALNIQRG 439 (448)
T ss_dssp ----------------------------------------------------------
T ss_pred CeEEEEEecCCCHHHHcC-CCCCCEEEEECCEECCCHHHHHHHHHcCCCeEEEEEEEC
Confidence 357899999999999999 999999999999999888999999987666777777543
No 437
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=96.87 E-value=0.00049 Score=63.66 Aligned_cols=53 Identities=32% Similarity=0.737 Sum_probs=44.2
Q ss_pred cccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCC---ceEEEecCCCCCCccccchhHHH
Q psy4417 99 YMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPN---WWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 99 ~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~---ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
.+.++++|.+.... +|.|++||++.|+.+.+.+ ||.++. ++..|++|++|+..
T Consensus 172 ~~~al~d~~~~~~~-------eLa~~~G~~i~vl~~~~~~~~~Ww~~~~---~~~~G~~P~~yv~~ 227 (239)
T 1ycs_B 172 VIYALWDYEPQNDD-------ELPMKEGDCMTIIHREDEDEIEWWWARL---NDKEGYVPRNLLGL 227 (239)
T ss_dssp EEEESSCBCCSSTT-------BCCBCSSCEEEECCCCTTSCSSEEEEEE---TTEEEEEEGGGEEC
T ss_pred eEEEEeccCCCCCC-------cccccCCCEEEEEEecCCCCCCEEEEEE---CCcEEEeehHHeeE
Confidence 45677888887766 8999999999999877665 999987 46789999999864
No 438
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=96.86 E-value=0.00017 Score=71.07 Aligned_cols=56 Identities=21% Similarity=0.432 Sum_probs=0.0
Q ss_pred CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccCCCHHHHHHHHHhcCCceeeeeccC
Q psy4417 29 GNLIIARILAGSLIDKQGVLKVGDVILGVNGENVSSPEDLQIEVVKSDGNIQFTIAPQ 86 (440)
Q Consensus 29 ~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v~t~~e~~~~L~~~~~~v~l~v~p~ 86 (440)
.+++|..|.++|||+++| |+.||.|++|||..+.+.+++..+|+. ++.+.|++...
T Consensus 254 ~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~l~~-~~~v~l~v~R~ 309 (332)
T 3num_A 254 SGAYIIEVIPDTPAEAGG-LKENDVIISINGQSVVSANDVSDVIKR-ESTLNMVVRRG 309 (332)
T ss_dssp ----------------------------------------------------------
T ss_pred CceEEEEeccCCChHHcC-CCCCCEEEEECCEECCCHHHHHHHHhC-CCeEEEEEEEC
Confidence 458899999999999999 999999999999999888888888865 66677777653
No 439
>3a8t_A Adenylate isopentenyltransferase; rossmann fold protein; HET: ATP; 2.37A {Humulus lupulus}
Probab=96.64 E-value=0.00013 Score=71.97 Aligned_cols=97 Identities=11% Similarity=0.013 Sum_probs=67.5
Q ss_pred cccCCCccccccccccccccccccccccccccc-CcccccCCCCCCCCCccCCCcceecCHHHH-HHhhhcCCeeEEEEE
Q psy4417 165 AFVPPEADYVHKIGICGTRYIKQYNTLQYNSTL-MSRSFPDTTRPMRELEENGQNYWFTSREVM-ERDIQDHKFLEYGEH 242 (440)
Q Consensus 165 ~~~~~~~~~~gk~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ttr~~r~~e~~g~~y~fvs~~~f-~~~i~~~~fle~~~~ 242 (440)
.+++.||+++||+++...+.++....+.--+.+ .-..++.+|++|++.|.+|.+|||++..++ .+....+.|.+.
T Consensus 42 lIvI~GPTgsGKTtLa~~LA~~l~~eiIs~Ds~qvYr~mdIgTakp~~eE~~gvphhlidi~~~~~e~~s~~~F~~~--- 118 (339)
T 3a8t_A 42 LLVLMGATGTGKSRLSIDLAAHFPLEVINSDKMQVYKGLDITTNKISVPDRGGVPHHLLGEVDPARGELTPADFRSL--- 118 (339)
T ss_dssp EEEEECSTTSSHHHHHHHHHTTSCEEEEECCSSTTBSSCTTTTTCCCSGGGTTCCEESSSCBCGGGCCCCHHHHHHH---
T ss_pred eEEEECCCCCCHHHHHHHHHHHCCCcEEcccccccccceeeecCCCCHHHHcCCCEeeccccCcccCccCHHHHHHH---
Confidence 577899999999998776654433222110111 015789999999999999999999988777 555555555433
Q ss_pred cCCccccchhhHHHHHhcCCeEEeecCcch
Q psy4417 243 NGHLYGTHLDSIREVILSGKICVLDCSPVG 272 (440)
Q Consensus 243 ~g~~yg~~~~~i~~v~~~g~~~il~~~~~g 272 (440)
-.+.|+++.++|+.+|+ ++..|
T Consensus 119 -------a~~~i~~i~~~g~~pIl-vGGtg 140 (339)
T 3a8t_A 119 -------AGKAVSEITGRRKLPVL-VGGSN 140 (339)
T ss_dssp -------HHHHHHHHHHTTCEEEE-ECCCH
T ss_pred -------HHHHHHHHHhcCCeEEE-EcCHH
Confidence 25678888889998888 44445
No 440
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=96.61 E-value=0.00091 Score=68.56 Aligned_cols=57 Identities=26% Similarity=0.430 Sum_probs=49.9
Q ss_pred CcEEEEEEcCCChhhhcCCCCCCCEEEeECCccCCCHHHHHHHHHh--cCCceeeeeccC
Q psy4417 29 GNLIIARILAGSLIDKQGVLKVGDVILGVNGENVSSPEDLQIEVVK--SDGNIQFTIAPQ 86 (440)
Q Consensus 29 ~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v~t~~e~~~~L~~--~~~~v~l~v~p~ 86 (440)
.+++|..|.++|||+++| |+.||.|++|||..+.+..++..+|.. .++.+.|++...
T Consensus 286 ~G~~V~~V~~gspA~~AG-L~~GDvI~~inG~~v~~~~~l~~~l~~~~~g~~v~l~v~R~ 344 (448)
T 1ky9_A 286 RGAFVSQVLPNSSAAKAG-IKAGDVITSLNGKPISSFAALRAQVGTMPVGSKLTLGLLRD 344 (448)
T ss_dssp CSEECCCCTTCSSSTTTT-CCTTCEECBSSSSBCCSSHHHHHHTTSSBTTCCCEEEEESS
T ss_pred CceEEEEeccCCHHHHcC-CCCCCEEEEECCEEcCCHHHHHHHHHhcCCCCEEEEEEEEC
Confidence 368999999999999999 999999999999999888899888874 477888888653
No 441
>1znw_A Guanylate kinase, GMP kinase; ATP:GMP-phosphotransferase, TR; 2.10A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1znx_A* 1zny_A* 1znz_A* 1s4q_A 1z8f_A
Probab=96.31 E-value=0.008 Score=54.40 Aligned_cols=145 Identities=28% Similarity=0.380 Sum_probs=96.9
Q ss_pred HhcCC-eEEeecCcchhhhhhhhhccccccccCCCceEEecCCCccceeecCCCcccchhhccCccccccCHHHHHHHHH
Q psy4417 258 ILSGK-ICVLDCSPVGLFTFLLGLIEGTVTAKLIPYTYSIPICSWSSFFASDTTRPMRELEENGQNYWFTSREVMERDIQ 336 (440)
Q Consensus 258 ~~~g~-~~il~~~~~g~~~l~~~l~~~~~~~~~~p~~i~i~~~~~~~f~~~~ttr~~~~~e~~g~~y~f~s~~~f~~~~~ 336 (440)
+.+|. ++|+..+.+|..+|++.|..- .|.+. +-...++|+++..+.+|..|.|.+...|..+..
T Consensus 17 i~~Gei~~l~GpnGsGKSTLl~~l~gl------~~~i~---------~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~ 81 (207)
T 1znw_A 17 AAVGRVVVLSGPSAVGKSTVVRCLRER------IPNLH---------FSVSATTRAPRPGEVDGVDYHFIDPTRFQQLID 81 (207)
T ss_dssp --CCCEEEEECSTTSSHHHHHHHHHHH------STTCE---------ECCCEESSCCCTTCCBTTTBEECCHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHhh------CCceE---------EcccccccCCcccccCCCeeEecCHHHHHHHHh
Confidence 45676 556666666667776554321 22222 223566776766778899999999999999999
Q ss_pred cCceeeEEEEcC--ccccccHHHHHHHHhcCCe---------------------eEecCCCcHHHHHHHH----------
Q psy4417 337 DHKFLEYGEHNG--HLYGTHLDSIREVILSGKI---------------------CVLDCSPVEEDIKRTL---------- 383 (440)
Q Consensus 337 ~~~fle~~~~~~--~~yGt~~~~i~~~~~~~~~---------------------~i~~~~~s~e~l~~~l---------- 383 (440)
.+.|++|.++.+ ..||++.+.+++.+.++.. +++...|....+.+.+
T Consensus 82 ~~~l~~~~~~~~n~~~~g~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~lS~l~~~p~~~~LDep~~~l~~~~d~~ 161 (207)
T 1znw_A 82 QGELLEWAEIHGGLHRSGTLAQPVRAAAATGVPVLIEVDLAGARAIKKTMPEAVTVFLAPPSWQDLQARLIGRGTETADV 161 (207)
T ss_dssp TTCEEEEEEEGGGTEEEEEEHHHHHHHHHHTCCEEEECCHHHHHHHHHHCTTSEEEEEECSCHHHHHHHHHTTSCSCHHH
T ss_pred cCCceeehhhcCchhhcCCcHHHHHHHHHcCCeEEEEeCHHHHHHHHHhcCCcEEEEEECCCHHHHHHHHHhcCCCCHHH
Confidence 999999999988 7899988877777665522 2344445554444443
Q ss_pred -----HHHHHHHHHhcCCccEEEEcCCHHHHHHHHHHHHH
Q psy4417 384 -----EESACLQRSYERFIDKVIVNEDFDETFRTVIELLD 418 (440)
Q Consensus 384 -----~~~~~~e~~~~~~fd~vi~Nddl~~a~~~l~~~i~ 418 (440)
.+.. .+......++.++++.|++.+......++-
T Consensus 162 ~~~~l~~~l-~~l~~~~g~tvi~vtHdl~~~~~~~d~i~~ 200 (207)
T 1znw_A 162 IQRRLDTAR-IELAAQGDFDKVVVNRRLESACAELVSLLV 200 (207)
T ss_dssp HHHHHHHHH-HHHHGGGGSSEEEECSSHHHHHHHHHHHHC
T ss_pred HHHHHHHHH-HHHhhhccCcEEEECCCHHHHHHHHHHHHH
Confidence 2211 122234568999999999999988887775
No 442
>2dyb_A Neutrophil cytosol factor 4; P40(PHOX), NADPH oxidase, oxidoreductase; HET: CAF; 3.15A {Homo sapiens}
Probab=96.23 E-value=0.0001 Score=72.94 Aligned_cols=52 Identities=21% Similarity=0.364 Sum_probs=42.3
Q ss_pred cccccCCCCC--CCCCCCcccccee--ccCCEEEEeecCCCCceEEEecCCCCCCccccch
Q psy4417 101 RCLFTYDPKE--DSLLPCKEIGLAF--NHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQ 157 (440)
Q Consensus 101 Ral~dy~p~~--d~~~p~~e~~L~f--~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~ 157 (440)
+|+|+|.+.. ++ +.+|+| ..||++.|++..|.+||.++..+..|..|++|++
T Consensus 270 ~a~yd~~~~~~~~~-----e~eL~~~~~~GD~I~v~~~~d~gWw~Ge~~g~~G~~glfP~~ 325 (341)
T 2dyb_A 270 KDLLELTRREFQRE-----DIALNYRDAEGDLVRLLSDEDVALMVRQARGLPSQKRLFPWK 325 (341)
T ss_dssp HHHHHHHHHHHTCS-----CEEEEEECSSSCEEECCSHHHHHHHHHHHTTSCCBTTBCSSC
T ss_pred hhhhhhhhhhcCCC-----cccccCCCCCCCEEEEeeecCCCEeEEEECCCCCCCceecce
Confidence 6788887732 21 337777 7999999999999999999887777889999996
No 443
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=96.08 E-value=0.0076 Score=67.79 Aligned_cols=67 Identities=16% Similarity=0.289 Sum_probs=55.0
Q ss_pred CccEEEEecCCCcEEEEEEcCC--------ChhhhcCC-CCCCCEEEeECCccCCCHHHHHHHHHh-cCCceeeeeccC
Q psy4417 18 PCGLTVEQDANGNLIIARILAG--------SLIDKQGV-LKVGDVILGVNGENVSSPEDLQIEVVK-SDGNIQFTIAPQ 86 (440)
Q Consensus 18 ~lGiti~~~~~~~i~V~~V~~g--------s~A~~~G~-L~~GD~Il~VNg~~v~t~~e~~~~L~~-~~~~v~l~v~p~ 86 (440)
++|+.+.. .+++++|..|.+| |||+++|. |+ ||+|++|||.++....++..+|+. .+..+.|+|.+.
T Consensus 738 g~G~~~~~-~~~~~~v~~v~~~~~~~~~~~spa~~ag~~l~-GD~I~~i~g~~~~~~~~~~~~~~~~~g~~v~l~v~r~ 814 (1045)
T 1k32_A 738 RIACDFKL-DGDHYVVAKAYAGDYSNEGEKSPIFEYGIDPT-GYLIEDIDGETVGAGSNIYRVLSEKAGTSARIRLSGK 814 (1045)
T ss_dssp BCSEEEEE-ETTEEEEEEECBSCTTSTTCBCGGGGGTCCCT-TCEEEEETTEECBTTBCHHHHHHTTTTSEEEEEEECS
T ss_pred eecEEEEE-eCCEEEEEEecCCCcccccCCChHHHCCCCcC-CCEEEEECCEEccchhhHHHhhcCCCCCEEEEEEECC
Confidence 78888875 3567999999998 99999994 88 999999999999555577788875 467788988764
No 444
>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens}
Probab=95.98 E-value=0.0033 Score=64.26 Aligned_cols=54 Identities=24% Similarity=0.325 Sum_probs=45.9
Q ss_pred CccccccccccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHH
Q psy4417 95 KPVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELE 160 (440)
Q Consensus 95 ~~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~ 160 (440)
..+..|+|++||... +.++.+||++.++|+.+..||..+. .+|..|+||+.++.
T Consensus 281 ~~~~~V~alcdy~~~----------e~~i~kge~~~L~~ns~~~~W~V~~--~~G~~~~vPavcf~ 334 (450)
T 3r6n_A 281 NKPIILRALCDYKQD----------QKIVHKGDECILKDNNERSKWYVTG--PGGVDMLVPSVGLI 334 (450)
T ss_dssp SSCCEEEESSCEEET----------TEEECTTCEEEEEECSSSSEEEEEC--SSSCCEEEEGGGEE
T ss_pred CCCceEEEeccccCC----------eeeEecCCEEEEecCCCCCceEEec--CCCCeeccceeEEe
Confidence 346889999999852 7899999999999999999998764 35779999999873
No 445
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=95.95 E-value=0.026 Score=58.89 Aligned_cols=54 Identities=15% Similarity=0.146 Sum_probs=47.5
Q ss_pred cEEEEEEcCCChhhhcCCCCCCCEEEeECCccCCCHHHHHHHHHhcCC-ceeeeec
Q psy4417 30 NLIIARILAGSLIDKQGVLKVGDVILGVNGENVSSPEDLQIEVVKSDG-NIQFTIA 84 (440)
Q Consensus 30 ~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v~t~~e~~~~L~~~~~-~v~l~v~ 84 (440)
+++|++|.++++|...| ++.||.|++|||+++.+..++.++|+.+.+ -+.|.+-
T Consensus 416 gVvvs~V~~~s~a~~~g-~~~gdiI~~vNg~~V~s~~~l~~~l~~~k~~~l~~~~~ 470 (539)
T 4fln_A 416 IVILSQVLANEVNIGYE-DMNNQQVLKFNGIPIRNIHHLAHLIDMCKDKYLVFEFE 470 (539)
T ss_dssp CEEEEEECCCGGGTTCS-SCCSEEEEEETTEECCSHHHHHHHHHTCCSSEEEEEET
T ss_pred EEEEEEecCCchhhhcC-CCCCCEEEeECCEEcCCHHHHHHHHHHcCCCeEEEEEC
Confidence 48899999999999999 999999999999999999999999997754 4556553
No 446
>1ug1_A KIAA1010 protein; structural genomics, SH3 domain, hypothetical protein BAA76854.1, riken structural genomics/proteomics initiative RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=95.93 E-value=0.005 Score=48.14 Aligned_cols=43 Identities=26% Similarity=0.519 Sum_probs=32.1
Q ss_pred CccccceeccCCEEEEeecCCC----CceEEEecCCCCCCccccchhHHH
Q psy4417 116 CKEIGLAFNHGDILQILNQKDP----NWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 116 ~~e~~L~f~~GdIl~V~~~~d~----~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
+++.+|++++|||+-|+.+.|+ .||-.+. ++..|++|++++.-
T Consensus 29 tq~~dl~l~~GdlVAVl~k~Dp~Gn~srW~Vdt---gg~~GyvPs~yLe~ 75 (92)
T 1ug1_A 29 AQDLDVSLLEGDLVGVIKKKDPMGSQNRWLIDN---GVTKGFVYSSFLKP 75 (92)
T ss_dssp CSSSCCCCCTTCEEEEEESCCTTSCSSEEEEEC---SSSEEEEEGGGEEE
T ss_pred CCceeeeecCCCEEEEEecCCCCCCCcceEEEC---CCcEEeeEhhhceE
Confidence 3455999999999999996433 3443333 57899999999864
No 447
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=95.03 E-value=0.027 Score=58.73 Aligned_cols=68 Identities=21% Similarity=0.257 Sum_probs=49.9
Q ss_pred CccEEEEecC------------CCcEEEEEEcCCChhhhcCCCCCCCEEEeECCccCCCHH----------HHHHHHH--
Q psy4417 18 PCGLTVEQDA------------NGNLIIARILAGSLIDKQGVLKVGDVILGVNGENVSSPE----------DLQIEVV-- 73 (440)
Q Consensus 18 ~lGiti~~~~------------~~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v~t~~----------e~~~~L~-- 73 (440)
-||+++..-. ..+++|..|.++|||++ + |+.||.|++|||..+.+.. .+..++.
T Consensus 254 ~LGv~~~~~~~~~~~~~~~l~~~~Gv~V~~V~~~spA~~-a-l~~GDvI~~idg~~V~~~g~~~~~~~~~~~l~~~v~~~ 331 (539)
T 4fln_A 254 CLGVLLQKLENPALRECLKVPTNEGVLVRRVEPTSDASK-V-LKEGDVIVSFDDLHVGCEGTVPFRSSERIAFRYLISQK 331 (539)
T ss_dssp BCCEEEEECCCHHHHHHHTCSSSBCEEEEEECTTSGGGG-T-CCTTCEEEEETTEECBSSSEEECSTTCEEETHHHHHTS
T ss_pred ecceEEEecCCHHHHHhcCCCCcCceeeecccCCChHHh-C-ccCCCEEEEECCEEeCcCCeeccccchhHHHHHHHHcC
Confidence 4788876421 24699999999999986 5 9999999999999983211 2344454
Q ss_pred hcCCceeeeeccCC
Q psy4417 74 KSDGNIQFTIAPQG 87 (440)
Q Consensus 74 ~~~~~v~l~v~p~~ 87 (440)
..++.+.|+|...-
T Consensus 332 ~~Gd~v~l~v~R~G 345 (539)
T 4fln_A 332 FAGDIAEIGIIRAG 345 (539)
T ss_dssp CTTCEEEEEEEETT
T ss_pred CCCCEEEEEEEECC
Confidence 45788888887653
No 448
>3eph_A TRNA isopentenyltransferase; transferase, alternative initiation, ATP-binding, cytoplasm, mitochondrion, nucleotide-binding, nucleus; 2.95A {Saccharomyces cerevisiae} PDB: 3epj_A 3epk_A* 3epl_A*
Probab=95.01 E-value=0.0013 Score=66.20 Aligned_cols=91 Identities=15% Similarity=0.075 Sum_probs=63.4
Q ss_pred eEEeecCcchhhhhhhhhccccccccCCCceEEecCCC-ccceeecCCCcccchhhccCccccccCHHHHHHHHHcCcee
Q psy4417 263 ICVLDCSPVGLFTFLLGLIEGTVTAKLIPYTYSIPICS-WSSFFASDTTRPMRELEENGQNYWFTSREVMERDIQDHKFL 341 (440)
Q Consensus 263 ~~il~~~~~g~~~l~~~l~~~~~~~~~~p~~i~i~~~~-~~~f~~~~ttr~~~~~e~~g~~y~f~s~~~f~~~~~~~~fl 341 (440)
++|.....+|..+|...|.+... ..+|+. -+ ..-.-.+.+|+.++..|.+|+.|||++..+|..+...+.|+
T Consensus 5 i~i~GptgsGKttla~~La~~~~-----~~iis~--Ds~QvYr~l~i~T~kp~~~E~~gv~hhlid~~~~~~~~s~~~F~ 77 (409)
T 3eph_A 5 IVIAGTTGVGKSQLSIQLAQKFN-----GEVINS--DSMQVYKDIPIITNKHPLQEREGIPHHVMNHVDWSEEYYSHRFE 77 (409)
T ss_dssp EEEEECSSSSHHHHHHHHHHHHT-----EEEEEC--CTTTTBSSCTTTTTCCCGGGTTTCCEESCSCBCTTSCCCHHHHH
T ss_pred EEEECcchhhHHHHHHHHHHHCC-----CeEeec--CccceecccccccCCCCHHHHcCchhhcCCccChHhHhhHHHHH
Confidence 34555555566667666654322 112210 00 00022577999999999999999999999999999999999
Q ss_pred eEEEEcCccccccHHHHHHHHhcCCeeEe
Q psy4417 342 EYGEHNGHLYGTHLDSIREVILSGKICVL 370 (440)
Q Consensus 342 e~~~~~~~~yGt~~~~i~~~~~~~~~~i~ 370 (440)
+++ .+.|+++...|+++|+
T Consensus 78 ~~a----------~~~i~~i~~~g~~pil 96 (409)
T 3eph_A 78 TEC----------MNAIEDIHRRGKIPIV 96 (409)
T ss_dssp HHH----------HHHHHHHHTTTCEEEE
T ss_pred HHH----------HHHHHHHHhcCCCEEE
Confidence 875 6788999999998765
No 449
>3foz_A TRNA delta(2)-isopentenylpyrophosphate transferas; nucleoside modification, isopentenyl-tRNA transferase, transferase-RNA complex; 2.50A {Escherichia coli k-12} PDB: 2zxu_A* 2zm5_A
Probab=94.89 E-value=0.0027 Score=61.65 Aligned_cols=55 Identities=13% Similarity=0.056 Sum_probs=44.6
Q ss_pred ecCCCcccchhhccCccccccCHHHHHHHHHcCceeeEEEEcCccccccHHHHHHHHhcCCeeEe
Q psy4417 306 ASDTTRPMRELEENGQNYWFTSREVMERDIQDHKFLEYGEHNGHLYGTHLDSIREVILSGKICVL 370 (440)
Q Consensus 306 ~~~ttr~~~~~e~~g~~y~f~s~~~f~~~~~~~~fle~~~~~~~~yGt~~~~i~~~~~~~~~~i~ 370 (440)
.+.+|++++..|.+|++|||++..+|..+...+.|. ..-.+.|+++..+|+++++
T Consensus 50 ~~igTakp~~~E~~~v~hhlid~~~~~e~~s~~~f~----------~~a~~~i~~i~~~g~~pil 104 (316)
T 3foz_A 50 MDIGTAKPNAEELLAAPHRLLDIRDPSQAYSAADFR----------RDALAEMADITAAGRIPLL 104 (316)
T ss_dssp CCTTTTCCCHHHHHHSCEETSSCBCTTSCCCHHHHH----------HHHHHHHHHHHHTTCEEEE
T ss_pred ccccCCCCCHHHHcCCCEEEeccCCccccccHHHHH----------HHHHHHHHHHHhCCCcEEE
Confidence 467999999999999999999988877665555444 4456789999999998765
No 450
>3crm_A TRNA delta(2)-isopentenylpyrophosphate transferase; ATP-binding, nucleotide-binding, nucleotidyltransferase, tRNA processing; 1.90A {Pseudomonas aeruginosa} PDB: 3crq_A 3crr_A
Probab=94.45 E-value=0.00082 Score=65.80 Aligned_cols=97 Identities=10% Similarity=-0.077 Sum_probs=63.5
Q ss_pred cccCCCccccccccccccccccccccccccccc-CcccccCCCCCCCCCccCCCcceecCHHHHHHhhhcCCeeEEEEEc
Q psy4417 165 AFVPPEADYVHKIGICGTRYIKQYNTLQYNSTL-MSRSFPDTTRPMRELEENGQNYWFTSREVMERDIQDHKFLEYGEHN 243 (440)
Q Consensus 165 ~~~~~~~~~~gk~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ttr~~r~~e~~g~~y~fvs~~~f~~~i~~~~fle~~~~~ 243 (440)
.+++.||+++||+++...+.++....+.-.+.+ .-...+.+|++|++.|.+|.+|||++..++......+.|++.
T Consensus 7 ~i~i~GptGsGKTtla~~La~~l~~~iis~Ds~qvy~~~~igTakp~~~e~~gvph~lid~~~~~~~~~~~~F~~~---- 82 (323)
T 3crm_A 7 AIFLMGPTAAGKTDLAMALADALPCELISVDSALIYRGMDIGTAKPSRELLARYPHRLIDIRDPAESYSAAEFRAD---- 82 (323)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHSCEEEEEECTTTTBTTCCTTTTCCCHHHHHHSCEETSSCBCTTSCCCHHHHHHH----
T ss_pred EEEEECCCCCCHHHHHHHHHHHcCCcEEeccchhhhcCCCcccCCCCHHHHcCCCEEEeeccCcccccCHHHHHHH----
Confidence 466789999999998776544322112111110 013568899999999999999999877655544333444332
Q ss_pred CCccccchhhHHHHHhcCCeEEeecCcch
Q psy4417 244 GHLYGTHLDSIREVILSGKICVLDCSPVG 272 (440)
Q Consensus 244 g~~yg~~~~~i~~v~~~g~~~il~~~~~g 272 (440)
-.+.|+++.++|+.+|+. +..|
T Consensus 83 ------a~~~i~~i~~~g~~~Ilv-GGt~ 104 (323)
T 3crm_A 83 ------ALAAMAKATARGRIPLLV-GGTM 104 (323)
T ss_dssp ------HHHHHHHHHHTTCEEEEE-ESCH
T ss_pred ------HHHHHHHHHHcCCeEEEE-CCch
Confidence 257788888899988773 4444
No 451
>3kfv_A Tight junction protein ZO-3; structural genomics consortium, SGC, cell junction, cell membrane, membrane, SH3 domain; 2.80A {Homo sapiens}
Probab=93.56 E-value=0.064 Score=51.91 Aligned_cols=31 Identities=19% Similarity=0.219 Sum_probs=23.6
Q ss_pred cHHHHHHHHhcCCeeEe---------------------cCCCcHHHHHHHHH
Q psy4417 354 HLDSIREVILSGKICVL---------------------DCSPVEEDIKRTLE 384 (440)
Q Consensus 354 ~~~~i~~~~~~~~~~i~---------------------~~~~s~e~l~~~l~ 384 (440)
++++|++++++|+.|+| +.|||.++|+++..
T Consensus 187 s~~~V~~vl~~Gk~~ILDId~QGa~~lk~~~~~pi~IFI~PPS~eeL~~rr~ 238 (308)
T 3kfv_A 187 KLDTVRVIAEKDKHALLDVTPSAIERLNYVQYYPIVVFFIPESRPALKALRQ 238 (308)
T ss_dssp CHHHHHHHHHTTCEEEECCCHHHHHHHHHTTCCCEEEEEEESCHHHHHHHHH
T ss_pred cHHHHHHHHHCCCcEEEEECHHHHHHHHhcCCCCEEEEEeCCCHHHHHHHHh
Confidence 77788888888887655 45889999988633
No 452
>3exa_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacillus halodurans} PDB: 2qgn_A
Probab=93.50 E-value=0.004 Score=60.58 Aligned_cols=56 Identities=14% Similarity=0.064 Sum_probs=46.2
Q ss_pred eecCCCcccchhhccCccccccCHHHHHHHHHcCceeeEEEEcCccccccHHHHHHHHhcCCeeEe
Q psy4417 305 FASDTTRPMRELEENGQNYWFTSREVMERDIQDHKFLEYGEHNGHLYGTHLDSIREVILSGKICVL 370 (440)
Q Consensus 305 ~~~~ttr~~~~~e~~g~~y~f~s~~~f~~~~~~~~fle~~~~~~~~yGt~~~~i~~~~~~~~~~i~ 370 (440)
-.+.+|++++..|.+|+.|||++..+|..+...+.|.+ .-.+.|+++.++|+.+|+
T Consensus 42 ~~~igTakp~~~E~~gvphhlid~~~~~e~~s~~~F~~----------~a~~~i~~i~~~gk~pIl 97 (322)
T 3exa_A 42 GMDIGTAKITAEEMDGVPHHLIDIKDPSESFSVADFQD----------LATPLITEIHERGRLPFL 97 (322)
T ss_dssp TCCTTTTCCCHHHHTTCCEESSSCBCTTSCCCHHHHHH----------HHHHHHHHHHHTTCEEEE
T ss_pred eeeecCCCCCHHHHcCCCEEEeccCChhhhccHHHHHH----------HHHHHHHHHHhCCCcEEE
Confidence 35779999999999999999999988877666655554 457889999999999875
No 453
>3tlx_A Adenylate kinase 2; structural genomics, structural genomics consortium, SGC, RO fold, transferase, ATP binding, phosphorylation; HET: ADP ATP AMP; 2.75A {Plasmodium falciparum}
Probab=93.28 E-value=0.011 Score=55.06 Aligned_cols=87 Identities=16% Similarity=0.010 Sum_probs=48.6
Q ss_pred cccCCCcccccccccccccccccccccccccccCcccccCCCCCC-CCCccCCCcceecCHHHHHHhhhcCCeeEEEEEc
Q psy4417 165 AFVPPEADYVHKIGICGTRYIKQYNTLQYNSTLMSRSFPDTTRPM-RELEENGQNYWFTSREVMERDIQDHKFLEYGEHN 243 (440)
Q Consensus 165 ~~~~~~~~~~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~ttr~~-r~~e~~g~~y~fvs~~~f~~~i~~~~fle~~~~~ 243 (440)
.+.+.|++++||+|++..+.++. .+.+ ....++.|.. +.+... -..+.+.+.+|.++...
T Consensus 31 ~I~l~G~~GsGKsT~a~~L~~~~--g~~~------is~~~~~r~~~~~~~~~--------g~~i~~~~~~g~~~~~~--- 91 (243)
T 3tlx_A 31 RYIFLGAPGSGKGTQSLNLKKSH--CYCH------LSTGDLLREAAEKKTEL--------GLKIKNIINEGKLVDDQ--- 91 (243)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHH--CCEE------EEHHHHHHHHTTSSSHH--------HHHHHHHHHTTCCCCHH---
T ss_pred EEEEECCCCCCHHHHHHHHHHHh--CCeE------EecHHHHHHHHhccchH--------HHHHHHHHhcCCCCcHH---
Confidence 35678999999999988764432 1221 2344444542 222221 23566666777765432
Q ss_pred CCccccchhhHHHHHhc---CCeEEeecCcchhhh
Q psy4417 244 GHLYGTHLDSIREVILS---GKICVLDCSPVGLFT 275 (440)
Q Consensus 244 g~~yg~~~~~i~~v~~~---g~~~il~~~~~g~~~ 275 (440)
+-..-+...+.. ++.+|++.-|....+
T Consensus 92 -----~~~~~~~~~l~~~~~~~~~ildg~p~~~~q 121 (243)
T 3tlx_A 92 -----MVLSLVDEKLKTPQCKKGFILDGYPRNVKQ 121 (243)
T ss_dssp -----HHHHHHHHHTTSGGGSSEEEEESCCCSHHH
T ss_pred -----HHHHHHHHHHhcccccCCEEecCCCCcHHH
Confidence 112333444433 677889888877644
No 454
>4dey_A Voltage-dependent L-type calcium channel subunit; maguk, voltage dependent calcium channel, transport protein; 1.95A {Oryctolagus cuniculus} PDB: 4dex_A 1t3l_A 1t3s_A 1vyv_A 1vyu_A 1vyt_A 1t0h_B 1t0j_B 1t0h_A 1t0j_A
Probab=92.18 E-value=0.074 Score=51.94 Aligned_cols=68 Identities=13% Similarity=0.159 Sum_probs=37.4
Q ss_pred CcccchhhccCccc--cccCHHHHHHHHHcCceeeEEEEcCccccccHHHHHHHHhcCCeeE------------------
Q psy4417 310 TRPMRELEENGQNY--WFTSREVMERDIQDHKFLEYGEHNGHLYGTHLDSIREVILSGKICV------------------ 369 (440)
Q Consensus 310 tr~~~~~e~~g~~y--~f~s~~~f~~~~~~~~fle~~~~~~~~yGt~~~~i~~~~~~~~~~i------------------ 369 (440)
||..+..+..++.| +|+++..|++.+..+.|+| +++..+.|.+..++|+.|+
T Consensus 180 tR~~~d~~~~~r~~~~~~~~~~~~e~~~~~~~~~e--------v~seVe~i~~v~~~Gk~vILDIDvQnGa~qlk~~~~~ 251 (337)
T 4dey_A 180 TRVTADISLAKRSVLNNPSKHAIIERSNTRSSLAE--------VQSEIERIFELARTLQLVVLDADTINHPAQLSKTSLA 251 (337)
T ss_dssp EEECSCGGGC-------------------CCCHHH--------HHHHHHHHHHHTTTCCEEEEEETTCCSGGGTTTSSCC
T ss_pred EeecchhhhcchhhhhcccchhhhcccccccchHH--------HHhHHHHHHHHHhCCCEEEEEeCcHHHHHHHHhcCCC
Confidence 36666666666664 5777888888888887776 4556666777777888765
Q ss_pred ----ecCCCcHHHHHHHHHH
Q psy4417 370 ----LDCSPVEEDIKRTLEE 385 (440)
Q Consensus 370 ----~~~~~s~e~l~~~l~~ 385 (440)
|+.|||.++|++||..
T Consensus 252 ~i~IFI~PPS~eeLe~RL~~ 271 (337)
T 4dey_A 252 PIVVYVKISSPKVLQRLIKS 271 (337)
T ss_dssp CEEEEECCSCHHHHHHHHHT
T ss_pred CEEEEEECcCHHHHHHHHHh
Confidence 4568999999999875
No 455
>1zak_A Adenylate kinase; ATP:AMP-phosphotransferase, transferase; HET: AP5; 3.50A {Zea mays} SCOP: c.37.1.1 g.41.2.1
Probab=89.44 E-value=0.032 Score=50.78 Aligned_cols=21 Identities=14% Similarity=-0.070 Sum_probs=16.6
Q ss_pred cccCCCccccccccccccccc
Q psy4417 165 AFVPPEADYVHKIGICGTRYI 185 (440)
Q Consensus 165 ~~~~~~~~~~gk~~~~~~~~~ 185 (440)
.+++.|++|+||+|++..+.+
T Consensus 7 ~I~l~G~~GsGKsT~~~~La~ 27 (222)
T 1zak_A 7 KVMISGAPASGKGTQCELIKT 27 (222)
T ss_dssp CEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHH
Confidence 456789999999998876644
No 456
>3dl0_A Adenylate kinase; phosphotransferase, zinc coordination, ATP-binding, binding, nucleotide biosynthesis, nucleotide-binding, trans; HET: AP5; 1.58A {Bacillus subtilis} PDB: 1p3j_A* 2ori_A* 2eu8_A* 2oo7_A* 2p3s_A* 2qaj_A* 2osb_A* 3dkv_A* 1zin_A* 1zio_A* 1zip_A* 1s3g_A*
Probab=89.27 E-value=0.1 Score=47.03 Aligned_cols=46 Identities=20% Similarity=0.223 Sum_probs=29.0
Q ss_pred cHHHHHHHHHHHHHH----HHHhcC-CccEEEE-cCCHHHHHHHHHHHHHhc
Q psy4417 375 VEEDIKRTLEESACL----QRSYER-FIDKVIV-NEDFDETFRTVIELLDTL 420 (440)
Q Consensus 375 s~e~l~~~l~~~~~~----e~~~~~-~fd~vi~-Nddl~~a~~~l~~~i~~~ 420 (440)
+.+.+++|++..... ...|.. ...++|. |.++++.++++.+++...
T Consensus 164 ~~e~i~~rl~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~v~~~i~~~l~~~ 215 (216)
T 3dl0_A 164 NEETVTKRLEVNMKQTAPLLDFYDEKGYLVNVNGQQDIQDVYADLKVLLGGL 215 (216)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHHGGG
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEECCCCHHHHHHHHHHHHHhc
Confidence 578888888754322 222322 1234444 467999999999998754
No 457
>3d3q_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2; 2.70A {Staphylococcus epidermidis atcc 12228}
Probab=88.58 E-value=0.028 Score=55.26 Aligned_cols=97 Identities=11% Similarity=0.075 Sum_probs=59.8
Q ss_pred cccCCCccccccccccccccccccccccccccc-CcccccCCCCCCCCCccCCCcceecCHHHHHHhhhcCCeeEEEEEc
Q psy4417 165 AFVPPEADYVHKIGICGTRYIKQYNTLQYNSTL-MSRSFPDTTRPMRELEENGQNYWFTSREVMERDIQDHKFLEYGEHN 243 (440)
Q Consensus 165 ~~~~~~~~~~gk~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ttr~~r~~e~~g~~y~fvs~~~f~~~i~~~~fle~~~~~ 243 (440)
.+.+.|++++||+++...+..+....+...+.+ .-...+.+|+.|++.|..|.+|+|++-.++........|.
T Consensus 9 lI~I~GptgSGKTtla~~La~~l~~~iis~Ds~qvYr~~~i~Takp~~eE~~~v~hhl~di~~~~~~~~~~dF~------ 82 (340)
T 3d3q_A 9 LIVIVGPTASGKTELSIEVAKKFNGEIISGDSMQVYQGMDIGTAKVTTEEMEGIPHYMIDILPPDASFSAYEFK------ 82 (340)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHTTEEEEECCSSTTBTTCCTTTTCCCTTTTTTCCEESSSCBCTTSCCCHHHHH------
T ss_pred eEEEECCCcCcHHHHHHHHHHHcCCceeccccccccccccccccCCCHHHHHHHHHHHHHHhCCccccCHHHHH------
Confidence 566789999999998776544322111100000 0145778999999999999999987654433322222222
Q ss_pred CCccccchhhHHHHHhcCCeEEeecCcch
Q psy4417 244 GHLYGTHLDSIREVILSGKICVLDCSPVG 272 (440)
Q Consensus 244 g~~yg~~~~~i~~v~~~g~~~il~~~~~g 272 (440)
......+.++...|+.+|+ ++..+
T Consensus 83 ----~~a~~~i~~i~~~g~~~Il-vGGt~ 106 (340)
T 3d3q_A 83 ----KRAEKYIKDITRRGKVPII-AGGTG 106 (340)
T ss_dssp ----HHHHHHHHHHHHTTCEEEE-ECCCH
T ss_pred ----HHHHHHHHHHHhCCCcEEE-ECChh
Confidence 2235667777778888777 44444
No 458
>3v9p_A DTMP kinase, thymidylate kinase; ssgcid, STRU genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia thailandensis}
Probab=88.24 E-value=0.15 Score=47.02 Aligned_cols=87 Identities=15% Similarity=-0.054 Sum_probs=45.0
Q ss_pred hcccCCCccccccccccccccccccccc---ccccccCcccccCCCCCCCCCccCCCcceecCHHHHHHhhhcCCeeEEE
Q psy4417 164 KAFVPPEADYVHKIGICGTRYIKQYNTL---QYNSTLMSRSFPDTTRPMRELEENGQNYWFTSREVMERDIQDHKFLEYG 240 (440)
Q Consensus 164 ~~~~~~~~~~~gk~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ttr~~r~~e~~g~~y~fvs~~~f~~~i~~~~fle~~ 240 (440)
..+++.|++++||+|++..+.++..... .+ .+ .+||.|+..+. | +.+.+.+.++.+-.+.
T Consensus 26 ~~I~~eG~~GsGKsT~~~~l~~~l~~~~~~~g~-------~v-~~~rep~~t~~-g--------~~ir~~l~~~~~~~~~ 88 (227)
T 3v9p_A 26 KFITFEGIDGAGKTTHLQWFCDRLQERLGPAGR-------HV-VVTREPGGTRL-G--------ETLREILLNQPMDLET 88 (227)
T ss_dssp CEEEEECCC---CHHHHHHHHHHHHHHHGGGTC-------CE-EEEESSSSSHH-H--------HHHHHHHHHSCCCHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHhhccccce-------ee-eeecCCCCChH-H--------HHHHHHHHcCCCCHHH
Confidence 3567789999999998887654322110 11 22 36787743221 2 3455555554321111
Q ss_pred E---EcCCccccchhhHHHHHhcCCeEEee
Q psy4417 241 E---HNGHLYGTHLDSIREVILSGKICVLD 267 (440)
Q Consensus 241 ~---~~g~~yg~~~~~i~~v~~~g~~~il~ 267 (440)
+ +..+.|..-.+.|+..+++|+++|+|
T Consensus 89 ~~llf~a~R~~~~~~~i~p~l~~g~~VI~D 118 (227)
T 3v9p_A 89 EALLMFAGRREHLALVIEPALARGDWVVSD 118 (227)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCEEEEe
Confidence 1 22233333344577777899999987
No 459
>1kht_A Adenylate kinase; phosphotransferase, signaling protein, transferase; HET: AMP; 2.50A {Methanococcus voltae} SCOP: c.37.1.1 PDB: 3h86_B* 1ki9_A
Probab=85.80 E-value=0.72 Score=39.99 Aligned_cols=25 Identities=16% Similarity=0.331 Sum_probs=18.8
Q ss_pred hcCCccEEEEcCC--HHHHHHHHHHHH
Q psy4417 393 YERFIDKVIVNED--FDETFRTVIELL 417 (440)
Q Consensus 393 ~~~~fd~vi~Ndd--l~~a~~~l~~~i 417 (440)
|.....++|.|.+ +++++++|.++|
T Consensus 165 ~~~~~~~~i~~~~~~~e~~~~~i~~~i 191 (192)
T 1kht_A 165 LTGATVKIVQNRNGLLDQAVEELTNVL 191 (192)
T ss_dssp HHCCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred hcCCcEEEEeCCCCCHHHHHHHHHHHh
Confidence 3344556667888 999999998876
No 460
>3fb4_A Adenylate kinase; psychrophIle, phosphotransferase, ATP-binding, nucleotide-binding, transferase; HET: AP5; 2.00A {Marinibacillus marinus}
Probab=85.63 E-value=0.12 Score=46.51 Aligned_cols=46 Identities=24% Similarity=0.270 Sum_probs=28.6
Q ss_pred cHHHHHHHHHHHHHH----HHHhcC-CccEEEEc-CCHHHHHHHHHHHHHhc
Q psy4417 375 VEEDIKRTLEESACL----QRSYER-FIDKVIVN-EDFDETFRTVIELLDTL 420 (440)
Q Consensus 375 s~e~l~~~l~~~~~~----e~~~~~-~fd~vi~N-ddl~~a~~~l~~~i~~~ 420 (440)
+.+.+++|++..... ...|.. ...++|.| .++++.++++.+++..+
T Consensus 164 ~~e~i~~rl~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~v~~~i~~~l~~~ 215 (216)
T 3fb4_A 164 KPETVKNRLDVNMKQTQPLLDFYSQKGVLKDIDGQQDIKKVFVDINDLLGGL 215 (216)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHhHHHHHHHHHcCCcEEEEECCCCHHHHHHHHHHHHHhc
Confidence 567888888754322 222322 12344543 57999999999998753
No 461
>2ze6_A Isopentenyl transferase; crown GALL tumor, cytokinin biosynthesis; HET: DST AMP; 2.10A {Agrobacterium tumefaciens} PDB: 2ze5_A* 2ze7_A* 2ze8_A
Probab=85.26 E-value=0.054 Score=50.70 Aligned_cols=94 Identities=5% Similarity=-0.099 Sum_probs=53.5
Q ss_pred cccCCCccccccccccccccccccccccccccc-CcccccCCCCCCCCCccCCCcceecCHHHHHH-hhhcCCeeEEEEE
Q psy4417 165 AFVPPEADYVHKIGICGTRYIKQYNTLQYNSTL-MSRSFPDTTRPMRELEENGQNYWFTSREVMER-DIQDHKFLEYGEH 242 (440)
Q Consensus 165 ~~~~~~~~~~gk~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ttr~~r~~e~~g~~y~fvs~~~f~~-~i~~~~fle~~~~ 242 (440)
.+.+.|++++||+++...+..+....+.-.+.+ .......+|+.|++.|..|..|+|++..++.+ ......|+
T Consensus 3 li~I~G~~GSGKSTla~~La~~~~~~~i~~D~~~~~~~~~~~t~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~f~----- 77 (253)
T 2ze6_A 3 LHLIYGPTCSGKTDMAIQIAQETGWPVVALDRVQCCPQIATGSGRPLESELQSTRRIYLDSRPLTEGILDAESAH----- 77 (253)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHCCCEEECCSGGGCGGGTTTTTCCCGGGGTTCCEECSCCCCGGGCSCCHHHHH-----
T ss_pred EEEEECCCCcCHHHHHHHHHhcCCCeEEeccHHhccCCCccccCCCCHHHHhCCCeEEEeeeccccccccHHHHH-----
Confidence 345689999999998776543322111111111 01234667888998999999998887543221 11111111
Q ss_pred cCCccccchhhHHHHHhcCCeEEeecC
Q psy4417 243 NGHLYGTHLDSIREVILSGKICVLDCS 269 (440)
Q Consensus 243 ~g~~yg~~~~~i~~v~~~g~~~il~~~ 269 (440)
-.....+ +++++|+.+|++.+
T Consensus 78 -----~~~~~~i-~~~~~g~~vIl~gg 98 (253)
T 2ze6_A 78 -----RRLIFEV-DWRKSEEGLILEGG 98 (253)
T ss_dssp -----HHHHHHH-HTTTTSSEEEEEEC
T ss_pred -----HHHHHHH-HHHhCCCCeEEecc
Confidence 1223555 66678888888644
No 462
>1nks_A Adenylate kinase; thermophilic, transferase; HET: AMP ADP; 2.57A {Sulfolobus acidocaldarius} SCOP: c.37.1.1
Probab=83.92 E-value=0.085 Score=46.17 Aligned_cols=20 Identities=10% Similarity=-0.203 Sum_probs=16.1
Q ss_pred ccCCCccccccccccccccc
Q psy4417 166 FVPPEADYVHKIGICGTRYI 185 (440)
Q Consensus 166 ~~~~~~~~~gk~~~~~~~~~ 185 (440)
+.+.|++|+||+|++..+.+
T Consensus 4 I~i~G~~GsGKsT~~~~L~~ 23 (194)
T 1nks_A 4 GIVTGIPGVGKSTVLAKVKE 23 (194)
T ss_dssp EEEEECTTSCHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHH
Confidence 45679999999999887644
No 463
>4eaq_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, MTBI, transferase; HET: ATM; 1.85A {Staphylococcus aureus subsp} PDB: 4dwj_A* 4f4i_A
Probab=81.78 E-value=0.15 Score=46.86 Aligned_cols=43 Identities=7% Similarity=0.041 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHH-HHHHhcCCccEEEEc--CCHHHHHHHHHHHHHhc
Q psy4417 376 EEDIKRTLEESAC-LQRSYERFIDKVIVN--EDFDETFRTVIELLDTL 420 (440)
Q Consensus 376 ~e~l~~~l~~~~~-~e~~~~~~fd~vi~N--ddl~~a~~~l~~~i~~~ 420 (440)
..++.+++.+... +...+. ..++++| .++++..+++.++|...
T Consensus 180 ~~~~~~rv~~~y~~l~~~~~--~~~~vIDa~~s~eev~~~I~~~l~~~ 225 (229)
T 4eaq_A 180 DLKFHEKVIEGYQEIIHNES--QRFKSVNADQPLENVVEDTYQTIIKY 225 (229)
T ss_dssp HHHHHHHHHHHHHHHTTTCT--TTEEEEETTSCHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhCC--CCEEEEeCCCCHHHHHHHHHHHHHHH
Confidence 4566667765432 222222 2344443 57999999999998754
No 464
>3a8t_A Adenylate isopentenyltransferase; rossmann fold protein; HET: ATP; 2.37A {Humulus lupulus}
Probab=80.40 E-value=0.14 Score=50.16 Aligned_cols=38 Identities=11% Similarity=0.057 Sum_probs=28.2
Q ss_pred ecCCCcccchhhccCccccccCHHHH-HHHHHcCceeeE
Q psy4417 306 ASDTTRPMRELEENGQNYWFTSREVM-ERDIQDHKFLEY 343 (440)
Q Consensus 306 ~~~ttr~~~~~e~~g~~y~f~s~~~f-~~~~~~~~fle~ 343 (440)
.+.+|++++..|.+|+.|||++-.++ ......+.|.++
T Consensus 80 mdIgTakp~~eE~~gvphhlidi~~~~~e~~s~~~F~~~ 118 (339)
T 3a8t_A 80 LDITTNKISVPDRGGVPHHLLGEVDPARGELTPADFRSL 118 (339)
T ss_dssp CTTTTTCCCSGGGTTCCEESSSCBCGGGCCCCHHHHHHH
T ss_pred eeeecCCCCHHHHcCCCEeeccccCcccCccCHHHHHHH
Confidence 47799999999999999999986665 444444444443
No 465
>2v54_A DTMP kinase, thymidylate kinase; nucleotide biosynthesis, ATP-binding, nucleotide-binding, poxvirus, transferase; HET: TYD POP; 2.4A {Vaccinia virus copenhagen} PDB: 2w0s_A*
Probab=75.23 E-value=0.31 Score=43.10 Aligned_cols=22 Identities=18% Similarity=0.002 Sum_probs=17.4
Q ss_pred cccCCCcccccccccccccccc
Q psy4417 165 AFVPPEADYVHKIGICGTRYIK 186 (440)
Q Consensus 165 ~~~~~~~~~~gk~~~~~~~~~~ 186 (440)
.+++.|++++||+|++..+.++
T Consensus 6 ~I~l~G~~GsGKsT~~~~L~~~ 27 (204)
T 2v54_A 6 LIVFEGLDKSGKTTQCMNIMES 27 (204)
T ss_dssp EEEEECCTTSSHHHHHHHHHHT
T ss_pred EEEEEcCCCCCHHHHHHHHHHH
Confidence 4567899999999998876543
No 466
>1gvn_B Zeta; postsegregational killing system, plasmid; 1.95A {Streptococcus pyogenes} SCOP: c.37.1.21 PDB: 3q8x_B*
Probab=74.38 E-value=2.6 Score=39.86 Aligned_cols=37 Identities=11% Similarity=-0.010 Sum_probs=22.6
Q ss_pred eeeEE-EEcCccccc-cHHHHHHHHhcCCeeEecCCCcH
Q psy4417 340 FLEYG-EHNGHLYGT-HLDSIREVILSGKICVLDCSPVE 376 (440)
Q Consensus 340 fle~~-~~~~~~yGt-~~~~i~~~~~~~~~~i~~~~~s~ 376 (440)
|.+|. ++.+++||+ ....++..++.|+.++++.....
T Consensus 83 ~~~~a~~~~~~~~~~~~~~~v~~~l~~g~~vIld~~~~~ 121 (287)
T 1gvn_B 83 YEKDVVKHVTPYSNRMTEAIISRLSDQGYNLVIEGTGRT 121 (287)
T ss_dssp HGGGCHHHHHHHHHHHHHHHHHHHHHHTCCEEECCCCCC
T ss_pred ccchhhhhhhHHHHHHHHHHHHHHHhcCCeEEEECCCCC
Confidence 34433 334567777 34567777777777777765543
No 467
>3crm_A TRNA delta(2)-isopentenylpyrophosphate transferase; ATP-binding, nucleotide-binding, nucleotidyltransferase, tRNA processing; 1.90A {Pseudomonas aeruginosa} PDB: 3crq_A 3crr_A
Probab=70.91 E-value=0.37 Score=46.86 Aligned_cols=54 Identities=11% Similarity=-0.017 Sum_probs=36.5
Q ss_pred cCCCcccchhhccCccccccCHHHHHHHHHcCceeeEEEEcCccccccHHHHHHHHhcCCeeEe
Q psy4417 307 SDTTRPMRELEENGQNYWFTSREVMERDIQDHKFLEYGEHNGHLYGTHLDSIREVILSGKICVL 370 (440)
Q Consensus 307 ~~ttr~~~~~e~~g~~y~f~s~~~f~~~~~~~~fle~~~~~~~~yGt~~~~i~~~~~~~~~~i~ 370 (440)
+.+|+.++..|.+|..|||++..++......+.|.++ -.+.|++++..|+.+++
T Consensus 46 ~igTakp~~~e~~gvph~lid~~~~~~~~~~~~F~~~----------a~~~i~~i~~~g~~~Il 99 (323)
T 3crm_A 46 DIGTAKPSRELLARYPHRLIDIRDPAESYSAAEFRAD----------ALAAMAKATARGRIPLL 99 (323)
T ss_dssp CTTTTCCCHHHHHHSCEETSSCBCTTSCCCHHHHHHH----------HHHHHHHHHHTTCEEEE
T ss_pred CcccCCCCHHHHcCCCEEEeeccCcccccCHHHHHHH----------HHHHHHHHHHcCCeEEE
Confidence 5678889999999999999987554333333333332 24577777888887554
No 468
>2y3a_B Phosphatidylinositol 3-kinase regulatory subunit; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=68.69 E-value=0.0066 Score=58.67 Aligned_cols=40 Identities=20% Similarity=0.218 Sum_probs=33.9
Q ss_pred cccccccCCCCCCCCCCCccccceeccCCEEEE---eecCCCCceEEEec
Q psy4417 99 YMRCLFTYDPKEDSLLPCKEIGLAFNHGDILQI---LNQKDPNWWQAQLI 145 (440)
Q Consensus 99 ~vRal~dy~p~~d~~~p~~e~~L~f~~GdIl~V---~~~~d~~ww~a~~~ 145 (440)
.+.|+++|.+..+. +|+|++||++.| ++..+++||++++.
T Consensus 105 rl~aL~~~~~~~~~-------eLsf~kgd~~~ier~ln~~~pdw~~l~k~ 147 (302)
T 2y3a_B 105 RIAEIHESRTKLEQ-------DLRAQASDNREIDKRMNSLKPDLMQLRKI 147 (302)
T ss_dssp HHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred HHHHHHhhhhcchh-------hhhhhhhHHHhHHhhhccCChHHHHHhhc
Confidence 57799999887776 999999999999 77778888877764
No 469
>3lv8_A DTMP kinase, thymidylate kinase; structural genomics, in diseases, center for structural genomics of infectious DISE ATP-binding; HET: ADP TMP TYD; 1.80A {Vibrio cholerae o1 biovar eltor} PDB: 3n2i_A*
Probab=68.19 E-value=0.64 Score=43.03 Aligned_cols=42 Identities=12% Similarity=0.105 Sum_probs=26.4
Q ss_pred HHHHHHHHHHH-HHHHHhcCCccEEEE--cCCHHHHHHHHHHHHHhcc
Q psy4417 377 EDIKRTLEESA-CLQRSYERFIDKVIV--NEDFDETFRTVIELLDTLS 421 (440)
Q Consensus 377 e~l~~~l~~~~-~~e~~~~~~fd~vi~--Nddl~~a~~~l~~~i~~~~ 421 (440)
.++.+++.+.. .+...+.. ++++ +.+.++..+++.++|...-
T Consensus 186 ~~~~~rv~~~y~~la~~~~~---~~vIDa~~sieeV~~~I~~~l~~~l 230 (236)
T 3lv8_A 186 ISFFERARERYLELANSDDS---VVMIDAAQSIEQVTADIRRALQDWL 230 (236)
T ss_dssp HHHHHHHHHHHHHHHHHCTT---EEEEETTSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCC---EEEEeCCCCHHHHHHHHHHHHHHHH
Confidence 46667776654 23333333 4444 3679999999999987543
No 470
>2z0h_A DTMP kinase, thymidylate kinase; ATP-binding, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics, NPPSFA; HET: ADP TYD; 2.10A {Thermotoga maritima} PDB: 3hjn_A*
Probab=66.66 E-value=0.53 Score=41.21 Aligned_cols=20 Identities=10% Similarity=-0.295 Sum_probs=16.0
Q ss_pred ccCCCccccccccccccccc
Q psy4417 166 FVPPEADYVHKIGICGTRYI 185 (440)
Q Consensus 166 ~~~~~~~~~gk~~~~~~~~~ 185 (440)
+.+.|++++||+|++..+..
T Consensus 3 I~l~G~~GsGKsT~~~~L~~ 22 (197)
T 2z0h_A 3 ITFEGIDGSGKSTQIQLLAQ 22 (197)
T ss_dssp EEEECSTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHH
Confidence 45679999999999887643
No 471
>3lw7_A Adenylate kinase related protein (ADKA-like); AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 2.30A {Sulfolobus solfataricus} PDB: 3h0k_A
Probab=62.42 E-value=26 Score=28.87 Aligned_cols=47 Identities=21% Similarity=0.238 Sum_probs=34.5
Q ss_pred CcHHHHHHHHHHHHHH-HHHhcCCccEEEEcC-CHHHHHHHHHHHHHhc
Q psy4417 374 PVEEDIKRTLEESACL-QRSYERFIDKVIVNE-DFDETFRTVIELLDTL 420 (440)
Q Consensus 374 ~s~e~l~~~l~~~~~~-e~~~~~~fd~vi~Nd-dl~~a~~~l~~~i~~~ 420 (440)
.+.+++.+++....+. ...+....|++|.|+ +++++++++..++...
T Consensus 129 ~~~~~~~~r~~~~~~~~~~~~~~~ad~vId~~~~~~~~~~~i~~~l~~~ 177 (179)
T 3lw7_A 129 KEISELIRRDREELKLGIGEVIAMADYIITNDSNYEEFKRRCEEVTDRV 177 (179)
T ss_dssp CCHHHHHHHHHHHHHHTHHHHHHTCSEEEECCSCHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHhhhccChHhHHHhCCEEEECCCCHHHHHHHHHHHHHHH
Confidence 4677888877543322 234556789999987 8999999999998754
No 472
>1a7j_A Phosphoribulokinase; transferase, calvin cycle; 2.50A {Rhodobacter sphaeroides} SCOP: c.37.1.6
Probab=61.71 E-value=0.13 Score=49.23 Aligned_cols=22 Identities=5% Similarity=-0.253 Sum_probs=14.2
Q ss_pred hcccCCCccccccccccccccc
Q psy4417 164 KAFVPPEADYVHKIGICGTRYI 185 (440)
Q Consensus 164 ~~~~~~~~~~~gk~~~~~~~~~ 185 (440)
..+.+.|++++||+|+++.+..
T Consensus 6 ~iIgItG~sGSGKSTva~~L~~ 27 (290)
T 1a7j_A 6 PIISVTGSSGAGTSTVKHTFDQ 27 (290)
T ss_dssp CEEEEESCC---CCTHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHH
Confidence 3456789999999999876543
No 473
>2f6r_A COA synthase, bifunctional coenzyme A synthase; 18044849, bifunctional coenzyme A synthase (COA synthase), S genomics; HET: ACO UNL; 1.70A {Mus musculus}
Probab=58.39 E-value=12 Score=34.90 Aligned_cols=25 Identities=16% Similarity=0.029 Sum_probs=21.1
Q ss_pred CccEEEEcC-CHHHHHHHHHHHHHhc
Q psy4417 396 FIDKVIVNE-DFDETFRTVIELLDTL 420 (440)
Q Consensus 396 ~fd~vi~Nd-dl~~a~~~l~~~i~~~ 420 (440)
..|++|.|+ +++++++++..++..+
T Consensus 244 ~AD~vIdn~~s~eel~~~I~~~l~~l 269 (281)
T 2f6r_A 244 QSNVVLSTLWESHVTQSQVEKAWNLL 269 (281)
T ss_dssp TCSEEEECSSCHHHHHHHHHHHHHHH
T ss_pred hCCEEEECCCCHHHHHHHHHHHHHHH
Confidence 579999887 7999999999988754
No 474
>2kt8_A Probable surface protein; SH3 family, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; NMR {Clostridium perfringens} PDB: 2kyb_A
Probab=54.05 E-value=6.8 Score=29.17 Aligned_cols=36 Identities=11% Similarity=0.403 Sum_probs=29.5
Q ss_pred eeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 122 AFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 122 ~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
.+.+|+.+.|++. +.+|++.+. ++..|+|.+.++..
T Consensus 28 ~l~~G~~v~vl~~-~~~W~kV~~---~g~~GwV~~~yl~~ 63 (76)
T 2kt8_A 28 SLSGNTKVTIVGE-EGAFYKIEY---KGSHGYVAKEYIKD 63 (76)
T ss_dssp EECTTCEEEEEEE-ETTEEEEEE---TTEEEEEEGGGEEE
T ss_pred EECCCCEEEEEEE-eCCEEEEEE---CCEEEEEEhHHhCc
Confidence 5779999999985 457999986 47899999988754
No 475
>1wfw_A Kalirin-9A; SH3 domain, neuron-specific GDP/GTP exchange factor, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.34.2.1
Probab=51.59 E-value=20 Score=26.27 Aligned_cols=49 Identities=16% Similarity=0.303 Sum_probs=38.0
Q ss_pred cccCCCCCCCCCCCccccceeccCCEEEEeecCCCCceEEEecCCC---CCCccccchh
Q psy4417 103 LFTYDPKEDSLLPCKEIGLAFNHGDILQILNQKDPNWWQAQLIEPT---GPMGLVPSQE 158 (440)
Q Consensus 103 l~dy~p~~d~~~p~~e~~L~f~~GdIl~V~~~~d~~ww~a~~~~~~---~~~G~iPs~~ 158 (440)
.-||.+...+ +.+...|+++.|+-.+..+-.-+.+..+. ...|+||..-
T Consensus 13 ~~dY~A~ke~-------eI~v~~ge~Vqila~nqqnm~Lv~~~a~~q~paaegWvPG~v 64 (74)
T 1wfw_A 13 IKDYYALKEN-------EICVSQGEVVQVLAVNQQNMCLVYQPASDHSPAAEGWVPGSI 64 (74)
T ss_dssp CSCBCCCSSS-------CCCBCTTCEEEEEEECTTSEEEEEECSCSSSSSEEEEEEGGG
T ss_pred Eeeeeeeccc-------eeccccCcEEEEEEecCcceEEEEeecCCCCccccCcccccE
Confidence 5577775544 89999999999999888888888887543 3469999865
No 476
>1rz3_A Hypothetical protein rbstp0775; MCSG, structural genomics, PSI, protein structure initiative; 1.90A {Geobacillus stearothermophilus} SCOP: c.37.1.6
Probab=50.72 E-value=3.8 Score=36.19 Aligned_cols=20 Identities=5% Similarity=-0.149 Sum_probs=15.0
Q ss_pred cccCCCcccccccccccccc
Q psy4417 165 AFVPPEADYVHKIGICGTRY 184 (440)
Q Consensus 165 ~~~~~~~~~~gk~~~~~~~~ 184 (440)
.+.+.|++++||++++..+.
T Consensus 24 ~i~i~G~~GsGKstl~~~l~ 43 (201)
T 1rz3_A 24 VLGIDGLSRSGKTTLANQLS 43 (201)
T ss_dssp EEEEEECTTSSHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHH
Confidence 34567999999999876543
No 477
>2krs_A Probable enterotoxin; all beta, SH3, ENTD, CPF_0587, CPE0606, structural genomics, PSI-2, protein structure initiative; NMR {Clostridium perfringens}
Probab=49.66 E-value=7.1 Score=28.83 Aligned_cols=35 Identities=14% Similarity=0.535 Sum_probs=28.5
Q ss_pred eeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHH
Q psy4417 122 AFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELE 160 (440)
Q Consensus 122 ~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~ 160 (440)
.+.+|+.+.|++.. .+|++.+. ++..|+|.+.++.
T Consensus 26 ~l~~G~~v~v~~~~-~~W~kV~~---~g~~GwV~~~yl~ 60 (74)
T 2krs_A 26 TLRNNDKVEIIKEV-DGWYEIRF---NGKVGYASKSYIT 60 (74)
T ss_dssp EEETTCEEEEEEEE-TTEEEEEE---TTEEEEECSSSEE
T ss_pred EECCCCEEEEEEEe-CCEEEEEE---CCeEEEEEhHHcC
Confidence 57899999999864 57998877 3679999998874
No 478
>3h8z_A FragIle X mental retardation syndrome-related Pro; tudor domains, FXR2, structura genomics, structural genomics consortium, SGC; 1.92A {Homo sapiens} PDB: 3o8v_A 3kuf_A 2bkd_N*
Probab=48.57 E-value=13 Score=30.83 Aligned_cols=26 Identities=19% Similarity=0.636 Sum_probs=19.5
Q ss_pred cceeccCCEEEEeecCCC----CceEEEec
Q psy4417 120 GLAFNHGDILQILNQKDP----NWWQAQLI 145 (440)
Q Consensus 120 ~L~f~~GdIl~V~~~~d~----~ww~a~~~ 145 (440)
...|..||-+.|....++ +||.|...
T Consensus 58 ~~~f~~gd~VEV~~~~~d~ep~gWw~a~I~ 87 (128)
T 3h8z_A 58 NKEITEGDEVEVYSRANEQEPCGWWLARVR 87 (128)
T ss_dssp --CCCTTCEEEEEECC---CCCEEEEEEEE
T ss_pred ccCCCCCCEEEEEecCCCCCcCccEEEEEE
Confidence 346889999999987655 89999885
No 479
>4i1u_A Dephospho-COA kinase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.05A {Burkholderia vietnamiensis} PDB: 4i1v_A*
Probab=43.21 E-value=19 Score=32.32 Aligned_cols=45 Identities=22% Similarity=0.193 Sum_probs=31.2
Q ss_pred cHHHHHHHHHHHHHHHHHhcCCccEEEEcC--CHHHHHHHHHHHHHhc
Q psy4417 375 VEEDIKRTLEESACLQRSYERFIDKVIVNE--DFDETFRTVIELLDTL 420 (440)
Q Consensus 375 s~e~l~~~l~~~~~~e~~~~~~fd~vi~Nd--dl~~a~~~l~~~i~~~ 420 (440)
+.+++.+|+..-...+ ......|+||.|+ ++++..+++..++...
T Consensus 156 s~eea~~ri~~Q~~~e-ek~~~AD~VIdN~~gsle~l~~qV~~l~~~~ 202 (210)
T 4i1u_A 156 TREQVEAIIARQATRE-ARLAAADDVIVNDAATPDALAVQVDALHQRY 202 (210)
T ss_dssp CHHHHHHHHHHSCCHH-HHHHTCSEEEECSSCCHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCChH-HHHHhCCEEEECCCCCHHHHHHHHHHHHHHH
Confidence 5677777765321111 2234689999998 8999999999988754
No 480
>2kq8_A Cell WALL hydrolase; GFT protein structure, NESG, PSI, SH3 domain, structural genomics, protein structure initiative; NMR {Bacillus thuringiensis serovarkonkukian}
Probab=42.50 E-value=3.8 Score=29.98 Aligned_cols=35 Identities=20% Similarity=0.546 Sum_probs=28.1
Q ss_pred eeccCCEEEEeecCCCCceEEEecCCCCCCccccchhHH
Q psy4417 122 AFNHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELE 160 (440)
Q Consensus 122 ~f~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~ 160 (440)
.+.+|+.+.|++. ..+|++.+. ++..|+|.+.++.
T Consensus 27 ~l~~G~~v~v~~~-~~~W~~V~~---~G~~GwV~~~~l~ 61 (70)
T 2kq8_A 27 ALPQGQKVQVISE-NSGWSKINY---NGQTGYIGTRYLS 61 (70)
T ss_dssp CCCSSSSCCCCEE-ETTEEEEEE---TTEEEEEETTSCS
T ss_pred EECCCCEEEEEEe-cCCEEEEEE---CCEEEEEEhHHcc
Confidence 4678999999885 468999987 4689999988764
No 481
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=38.57 E-value=1.3 Score=45.14 Aligned_cols=33 Identities=12% Similarity=0.046 Sum_probs=18.4
Q ss_pred ccCCEEEEeecCCCCceEEEecCCCCCCccccchhHHH
Q psy4417 124 NHGDILQILNQKDPNWWQAQLIEPTGPMGLVPSQELEE 161 (440)
Q Consensus 124 ~~GdIl~V~~~~d~~ww~a~~~~~~~~~G~iPs~~~~~ 161 (440)
..||+. ..+++||.|+... .+..|+||++++++
T Consensus 8 ~~~~~~----~~~~~ww~~~~~~-~~~~g~~P~~~v~~ 40 (463)
T 3cxl_A 8 SSGREN----LYFQGVWKSYLYQ-LQQEAPHPRRITCT 40 (463)
T ss_dssp --------------CCSCCHHHH-HHHHSCCCEECCCC
T ss_pred cCCCCC----CCCCCEEEEEecC-cCccCCCCcCccCC
Confidence 346554 4688999998752 24689999999875
No 482
>1np6_A Molybdopterin-guanine dinucleotide biosynthesis protein B; mixed alpha-beta fold, elongated beta-sheet, walker A motif, P-loop structural motif; 1.90A {Escherichia coli} SCOP: c.37.1.10 PDB: 1p9n_A
Probab=37.16 E-value=1.6 Score=38.33 Aligned_cols=85 Identities=5% Similarity=-0.092 Sum_probs=41.2
Q ss_pred cccCCCcccccccccccccccccccccccccccCcccccCCCCCCCCCccC--CCc-ceecCHHHHHHhhhcCCeeEEEE
Q psy4417 165 AFVPPEADYVHKIGICGTRYIKQYNTLQYNSTLMSRSFPDTTRPMRELEEN--GQN-YWFTSREVMERDIQDHKFLEYGE 241 (440)
Q Consensus 165 ~~~~~~~~~~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~ttr~~r~~e~~--g~~-y~fvs~~~f~~~i~~~~fle~~~ 241 (440)
.+.+.|++++||++++..+...... .. ..+..+++.++..+.+ |.+ |+|+. .-+....-. ...++..
T Consensus 8 ~i~i~G~sGsGKTTl~~~l~~~l~~-~g-------~~v~~i~~~~~~~~id~~g~Ds~~~~~-~G~~~v~i~-~~~~~~~ 77 (174)
T 1np6_A 8 LLAFAAWSGTGKTTLLKKLIPALCA-RG-------IRPGLIKHTHHDMDVDKPGKDSYELRK-AGAAQTIVA-SQQRWAL 77 (174)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHHH-TT-------CCEEEEEECCC------------CHHH-HTCSEEEEE-CSSEEEE
T ss_pred EEEEEeCCCCCHHHHHHHHHHhccc-cC-------CceeEEeeCCCccccCCCCCceEEEEe-CCcceeecc-cchhhee
Confidence 4556899999999988765532111 11 1344555666665554 555 55543 111111001 1234444
Q ss_pred EcCCccccchhhHHHHHhc
Q psy4417 242 HNGHLYGTHLDSIREVILS 260 (440)
Q Consensus 242 ~~g~~yg~~~~~i~~v~~~ 260 (440)
..+ .|+++..++++++..
T Consensus 78 ~~~-~~~~~~~~L~~ll~r 95 (174)
T 1np6_A 78 MTE-TPDEEELDLQFLASR 95 (174)
T ss_dssp EEE-CSSSCCCCHHHHHHH
T ss_pred eee-ccCCchhhHHHHHHh
Confidence 433 588888888888754
No 483
>2jmc_A Spectrin alpha chain, brain and P41 peptide chimera; SPC-SH3, signaling protein; NMR {Gallus gallus}
Probab=36.61 E-value=13 Score=27.40 Aligned_cols=22 Identities=14% Similarity=0.329 Sum_probs=18.7
Q ss_pred cccccccccCCCCCCCCCCCccccceecc
Q psy4417 97 VCYMRCLFTYDPKEDSLLPCKEIGLAFNH 125 (440)
Q Consensus 97 ~~~vRal~dy~p~~d~~~p~~e~~L~f~~ 125 (440)
..+++|+|||.++.++ +|+|.+
T Consensus 52 ~~~~~alydy~a~~~d-------Elsf~~ 73 (77)
T 2jmc_A 52 KELVLALYDYQESGDN-------APSYSP 73 (77)
T ss_dssp CCEEEESSCCCCSSCC-------CCCSCC
T ss_pred CceEEECCCcCCCCCC-------ccccCC
Confidence 4688999999999988 888865
No 484
>3kb2_A SPBC2 prophage-derived uncharacterized protein YORR; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: G3D; 2.20A {Bacillus subtilis} SCOP: c.37.1.1 PDB: 2axp_A*
Probab=35.92 E-value=59 Score=26.72 Aligned_cols=24 Identities=17% Similarity=0.112 Sum_probs=18.7
Q ss_pred CccEEEEcC--CHHHHHHHHHHHHHh
Q psy4417 396 FIDKVIVNE--DFDETFRTVIELLDT 419 (440)
Q Consensus 396 ~fd~vi~Nd--dl~~a~~~l~~~i~~ 419 (440)
..+.+|.++ +++++.+++...+..
T Consensus 141 ~~~~~id~~~~~~~ev~~~I~~~~~~ 166 (173)
T 3kb2_A 141 LHTYSWDTGQWSSDEIAKDIIFLVEL 166 (173)
T ss_dssp SCEEEEETTTSCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCHHHHHHHHHHHHhC
Confidence 355666665 799999999999983
No 485
>3dor_A Protein CT_858, CPAF; mature CPAF, dimer, transferase; 2.20A {Chlamydia trachomatis} PDB: 3dpm_A* 3dpn_A 3dja_A
Probab=31.84 E-value=47 Score=34.54 Aligned_cols=40 Identities=30% Similarity=0.469 Sum_probs=28.0
Q ss_pred CccEEEEecCCCcEEEEEEcCCChhhhcCCCCCCCEEEeECCccC
Q psy4417 18 PCGLTVEQDANGNLIIARILAGSLIDKQGVLKVGDVILGVNGENV 62 (440)
Q Consensus 18 ~lGiti~~~~~~~i~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v 62 (440)
-+|+.+.--.++.++|..+..... + +..||+|++|||+++
T Consensus 85 ~~Pf~vki~iDG~i~V~dv~~~~s----~-I~vGdEIlsING~pv 124 (583)
T 3dor_A 85 YLPYTVQKSSDGRFYFVDIMTFSS----E-IRVGDELLEVDGAPV 124 (583)
T ss_dssp ECSEEEEECTTSCEEEEEECSSCC----S-SCTTCEEEEETTEEH
T ss_pred cCCeEEEEEECCcEEEEecccccc----C-CCCCCEEEEECCccH
Confidence 346766533566788866633222 4 999999999999887
No 486
>3hdt_A Putative kinase; structura genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 2.79A {Clostridium symbiosum atcc 14940}
Probab=29.34 E-value=2e+02 Score=25.61 Aligned_cols=24 Identities=17% Similarity=0.127 Sum_probs=20.1
Q ss_pred CccEEEEcC--CHHHHHHHHHHHHHh
Q psy4417 396 FIDKVIVNE--DFDETFRTVIELLDT 419 (440)
Q Consensus 396 ~fd~vi~Nd--dl~~a~~~l~~~i~~ 419 (440)
.+|.+|.++ +.+++++.|.+++..
T Consensus 193 ~~dl~IdT~~l~~eevv~~I~~~i~~ 218 (223)
T 3hdt_A 193 NYDLPINTTKLTLEETAELIKAYIRL 218 (223)
T ss_dssp GCSEEEECTTCCHHHHHHHHHHHHHH
T ss_pred cCeEEEECCCCCHHHHHHHHHHHHHH
Confidence 689888776 599999999998874
No 487
>2dun_A POL MU, DNA polymerase MU; layers A/B/A, parallel beta-sheet of 4 strands, non- homologous END jonting, somatic hypermutation, V(D)J recombination; HET: DNA; NMR {Homo sapiens} PDB: 2htf_A*
Probab=28.18 E-value=31 Score=28.73 Aligned_cols=58 Identities=7% Similarity=-0.033 Sum_probs=39.6
Q ss_pred HHHHHHHHHH--HHHHHHhcCCccEEEE-cCCHHHHHHHHHHHHHhcc---CCCeeeeccceec
Q psy4417 377 EDIKRTLEES--ACLQRSYERFIDKVIV-NEDFDETFRTVIELLDTLS---NKHQVDSRPTILM 434 (440)
Q Consensus 377 e~l~~~l~~~--~~~e~~~~~~fd~vi~-Nddl~~a~~~l~~~i~~~~---~~~~wvp~~w~~~ 434 (440)
-++..+|... .+.+..|....+|||+ |.+.++++.-|+.-+..+. ..++++-++|+.+
T Consensus 28 r~fL~~la~~kGf~v~~~~S~~VTHVV~E~~s~~~~~~~L~~~~~~l~~~~~~~~lLdisWlte 91 (133)
T 2dun_A 28 RAFLTGLARSKGFRVLDACSSEATHVVMEETSAEEAVSWQERRMAAAPPGCTPPALLDISWLTE 91 (133)
T ss_dssp HHHHHHHHHHHTEEECSSCCTTCCEEEESSCCHHHHHHHHHHHHHHSCTTCCCCEEEEHHHHHH
T ss_pred HHHHHHHHHhcCCEeccccCCCceEEEecCCCHHHHHHHHHHhhcccCcCCCCcEEeccHHHHH
Confidence 3444444432 2345567888999998 5678887777765666555 6789999999864
No 488
>3vaa_A Shikimate kinase, SK; structural genomics, center for structural genomics of infec diseases, csgid, metal binding, transferase; 1.70A {Bacteroides thetaiotaomicron}
Probab=25.62 E-value=1.9e+02 Score=24.65 Aligned_cols=45 Identities=7% Similarity=0.121 Sum_probs=29.8
Q ss_pred cHHHHHHHHHHHHH-HHHHhcCCccEEEEcCC--HHHHHHHHHHHHHhc
Q psy4417 375 VEEDIKRTLEESAC-LQRSYERFIDKVIVNED--FDETFRTVIELLDTL 420 (440)
Q Consensus 375 s~e~l~~~l~~~~~-~e~~~~~~fd~vi~Ndd--l~~a~~~l~~~i~~~ 420 (440)
+.+++.++++.-.. -+..|.. .|++|.|++ .+++++++.+.+...
T Consensus 149 ~~~~~~~~i~~~~~~r~~~y~~-ad~~Idt~~~s~ee~~~~I~~~l~~~ 196 (199)
T 3vaa_A 149 EDDELMDFIIQALEKRAPFYTQ-AQYIFNADELEDRWQIESSVQRLQEL 196 (199)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTT-SSEEEECCCCSSHHHHHHHHHHHHHH
T ss_pred ChhhHHHHHHHHHHHHHHHHhh-CCEEEECCCCCHHHHHHHHHHHHHHH
Confidence 34555555544322 2234555 899998875 999999999988754
No 489
>3fdi_A Uncharacterized protein; cytidylate kinase like protein, PSI, MCSG, PRK04182 class ME structural genomics, protein structure initiative; 2.20A {Eubacterium ventriosum}
Probab=25.10 E-value=2e+02 Score=24.93 Aligned_cols=25 Identities=24% Similarity=0.274 Sum_probs=20.2
Q ss_pred CccEEEEcC--CHHHHHHHHHHHHHhc
Q psy4417 396 FIDKVIVNE--DFDETFRTVIELLDTL 420 (440)
Q Consensus 396 ~fd~vi~Nd--dl~~a~~~l~~~i~~~ 420 (440)
.+|.+|.++ +.+++++.|.+++...
T Consensus 173 ~~dl~Idt~~l~~eevv~~I~~~i~~~ 199 (201)
T 3fdi_A 173 TYDICIKIGKVDVDTATDMIIKYIDSR 199 (201)
T ss_dssp GCSEEEEESSSCHHHHHHHHHHHHHTC
T ss_pred cCCEEEECCCCCHHHHHHHHHHHHHHh
Confidence 478988776 5899999999988743
No 490
>2if2_A Dephospho-COA kinase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 3.00A {Aquifex aeolicus}
Probab=21.22 E-value=45 Score=28.68 Aligned_cols=48 Identities=25% Similarity=0.448 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHHHHHhcCCccEEEEcC-CHHHHHHHHHHHHHhccCCC
Q psy4417 376 EEDIKRTLEESACLQRSYERFIDKVIVNE-DFDETFRTVIELLDTLSNKH 424 (440)
Q Consensus 376 ~e~l~~~l~~~~~~e~~~~~~fd~vi~Nd-dl~~a~~~l~~~i~~~~~~~ 424 (440)
.+++.++++..... ..+....|++|.|+ ++++.++++.+++......|
T Consensus 148 ~~~~~~~~~~~~~~-~~~~~~ad~vId~~~~~~~~~~~i~~~l~~~~~~~ 196 (204)
T 2if2_A 148 EEDFERRWKKQMPI-EEKVKYADYVIDNSGSIEETYKQVKKVYEELTRDP 196 (204)
T ss_dssp HHHHHHHHTTSCCH-HHHGGGCSEECCCSSCHHHHHHHHHHHHHTTCC--
T ss_pred HHHHHHHHHhCCCh-hHHHhcCCEEEECCCCHHHHHHHHHHHHHHHhcCh
Confidence 44555555432111 12334568888776 79999999999998766544
No 491
>1jjv_A Dephospho-COA kinase; P-loop nucleotide-binding fold, structure 2 function project, S2F, structural genomics, transferase; HET: ATP; 2.00A {Haemophilus influenzae} SCOP: c.37.1.1
Probab=21.06 E-value=78 Score=27.19 Aligned_cols=44 Identities=25% Similarity=0.362 Sum_probs=27.4
Q ss_pred cHHHHHHHHHHHHHHHHHhcCCccEEEEcC-CHH----HHHHHHHHHHHh
Q psy4417 375 VEEDIKRTLEESACLQRSYERFIDKVIVNE-DFD----ETFRTVIELLDT 419 (440)
Q Consensus 375 s~e~l~~~l~~~~~~e~~~~~~fd~vi~Nd-dl~----~a~~~l~~~i~~ 419 (440)
+.+++.++++.....+..+. ..|++|.|+ +++ +..+++..++..
T Consensus 148 ~~e~~~~r~~~q~~~~~~~~-~ad~vIdn~~~~~~~~~~~~~~i~~~~~~ 196 (206)
T 1jjv_A 148 NFEQIQRIMNSQVSQQERLK-WADDVINNDAELAQNLPHLQQKVLELHQF 196 (206)
T ss_dssp CHHHHHHHHHHSCCHHHHHH-HCSEEEECCSCHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCChHHHHH-hCCEEEECCCCccccHHHHHHHHHHHHHH
Confidence 45666666654111122222 468999886 588 888888887764
No 492
>3onh_A Ubiquitin-activating enzyme E1-like; ligase, SUMO conjugation, UBC9; 1.60A {Saccharomyces cerevisiae} PDB: 3ong_A
Probab=20.98 E-value=66 Score=26.43 Aligned_cols=69 Identities=10% Similarity=0.213 Sum_probs=43.1
Q ss_pred EEeECCccC--CCHHHHHHHHHhc---CCceeeeeccCCCCCCCCCCccccccccccCCCCCCCCCCCccccceeccCCE
Q psy4417 54 ILGVNGENV--SSPEDLQIEVVKS---DGNIQFTIAPQGDDASLPIKPVCYMRCLFTYDPKEDSLLPCKEIGLAFNHGDI 128 (440)
Q Consensus 54 Il~VNg~~v--~t~~e~~~~L~~~---~~~v~l~v~p~~~~~~~~~~~~~~vRal~dy~p~~d~~~p~~e~~L~f~~GdI 128 (440)
++.|+-..+ .|..++...|+.. ++ .+.|.... -.|-+ |+|.-|+.++.+=.+|.++.|.+
T Consensus 9 vl~v~~~dl~~~TL~dLV~~l~~~~gy~~--eiSV~~~~-----------~~rLL--yD~DfDDnl~k~L~dLgv~~gsf 73 (127)
T 3onh_A 9 VIKLSSDCLNKMKLSDFVVLIREKYSYPQ--DISLLDAS-----------NQRLL--FDYDFEDLNDRTLSEINLGNGSI 73 (127)
T ss_dssp EEEECHHHHHHCBHHHHHHHHHHHHTCCS--SEEEEETT-----------TTEEE--EETTBCTTTTSBTTTTTCCTTCE
T ss_pred EEEeCcccccccCHHHHHHHHHHhcCCCC--cEEEEecC-----------CCCeE--eCCCccccccCcHHHcCcCCCcE
Confidence 445554444 5777877777532 23 33332100 01233 56666778888888999999999
Q ss_pred EEEeecCCC
Q psy4417 129 LQILNQKDP 137 (440)
Q Consensus 129 l~V~~~~d~ 137 (440)
|.|.|.+|.
T Consensus 74 Ltv~DEdde 82 (127)
T 3onh_A 74 ILFSDEEGD 82 (127)
T ss_dssp EEEEESCCS
T ss_pred EEEEccccc
Confidence 999986443
No 493
>3ch4_B Pmkase, phosphomevalonate kinase; parallel beta-sheet with the strand order 23145, walker A motif, cholesterol biosynthesis, lipid synthesis; 1.76A {Homo sapiens}
Probab=20.35 E-value=71 Score=28.41 Aligned_cols=27 Identities=19% Similarity=0.113 Sum_probs=20.9
Q ss_pred CCccEEEEcCC-HHHHHHHHHHHHHhcc
Q psy4417 395 RFIDKVIVNED-FDETFRTVIELLDTLS 421 (440)
Q Consensus 395 ~~fd~vi~Ndd-l~~a~~~l~~~i~~~~ 421 (440)
..+|++|+||. +++-.++|..++..++
T Consensus 164 ~~~D~vI~Ndgt~eel~~~v~~ll~~~~ 191 (202)
T 3ch4_B 164 GDFDWVIENHGVEQRLEEQLENLIEFIR 191 (202)
T ss_dssp CCCSEEEEECSCHHHHHHHHHHHHHHHH
T ss_pred CcCCEEEEeCCCHHHHHHHHHHHHHHHH
Confidence 36999999865 8878888888776553
Done!