Query psy443
Match_columns 403
No_of_seqs 323 out of 2553
Neff 7.1
Searched_HMMs 29240
Date Fri Aug 16 16:52:47 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy443.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/443hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2z6w_A Peptidyl-prolyl CIS-tra 100.0 2.6E-44 8.8E-49 321.4 15.7 148 256-403 11-160 (165)
2 2cmt_A Peptidyl-prolyl CIS-tra 100.0 2.8E-44 9.5E-49 323.0 15.2 147 257-403 19-167 (172)
3 2r99_A Peptidyl-prolyl CIS-tra 100.0 3.9E-44 1.3E-48 322.4 15.9 146 258-403 21-168 (173)
4 2igv_A Peptidyl-prolyl CIS-tra 100.0 4.1E-44 1.4E-48 322.4 14.7 148 256-403 11-167 (173)
5 3pmp_A Cyclophilin A; peptidyl 100.0 8E-44 2.7E-48 318.1 15.7 148 256-403 10-159 (164)
6 2poy_A Peptidyl-prolyl CIS-tra 100.0 7.7E-44 2.6E-48 323.5 15.0 148 256-403 27-183 (186)
7 1qng_A Peptidyl-prolyl CIS-tra 100.0 9.4E-44 3.2E-48 319.2 14.3 147 256-403 11-166 (170)
8 2haq_A Cyclophilin; rotamase, 100.0 1.2E-43 4.1E-48 318.5 14.2 147 256-403 19-168 (172)
9 1a58_A Cyclophilin; isomerase, 100.0 2.4E-43 8.4E-48 318.5 15.7 147 256-403 14-172 (177)
10 2wfi_A Peptidyl-prolyl CIS-tra 100.0 3.5E-43 1.2E-47 317.9 15.7 147 256-403 17-175 (179)
11 3ich_A Peptidyl-prolyl CIS-tra 100.0 3.7E-43 1.3E-47 319.8 14.7 146 258-403 25-173 (188)
12 3rdd_A Peptidyl-prolyl CIS-tra 100.0 5.8E-43 2E-47 317.6 14.8 148 256-403 30-179 (184)
13 2he9_A NK-tumor recognition pr 100.0 8.3E-43 2.8E-47 318.2 15.5 147 256-403 27-185 (192)
14 4fru_A Cyclophilin B, peptidyl 100.0 1.3E-42 4.6E-47 315.9 14.6 148 256-403 20-170 (185)
15 3k2c_A Peptidyl-prolyl CIS-tra 100.0 3.6E-42 1.2E-46 314.5 16.7 148 256-403 35-186 (193)
16 1mzw_A Cyclophilin H, U-snRNP- 100.0 1.4E-42 4.6E-47 313.5 13.8 147 257-403 19-173 (177)
17 2c3b_A Ppiase, cyclophilin; is 100.0 4.8E-43 1.6E-47 315.0 9.0 141 263-403 22-168 (172)
18 2fu0_A Cyclophilin, putative; 100.0 7.7E-42 2.6E-46 303.8 12.6 137 263-403 17-155 (160)
19 2a2n_A Peptidylprolyl isomeras 100.0 2E-41 6.8E-46 305.3 12.8 136 264-403 34-172 (176)
20 2x7k_A Peptidyl-prolyl CIS-tra 100.0 1.8E-41 6.1E-46 303.2 12.2 137 263-403 23-161 (166)
21 1z81_A Cyclophilin; structural 100.0 2.5E-41 8.5E-46 315.3 13.3 148 256-403 67-225 (229)
22 2ok3_A Peptidyl-prolyl CIS-tra 100.0 2.6E-41 9E-46 300.8 12.8 137 263-403 12-151 (161)
23 2r99_A Peptidyl-prolyl CIS-tra 100.0 1.4E-40 4.8E-45 299.3 16.3 146 124-269 23-168 (173)
24 2cmt_A Peptidyl-prolyl CIS-tra 100.0 1.7E-40 5.8E-45 298.3 16.5 146 124-269 22-167 (172)
25 2ose_A Probable peptidyl-proly 100.0 5.6E-41 1.9E-45 314.8 12.9 161 227-403 7-202 (234)
26 2poe_A Cyclophilin-like protei 100.0 8.2E-41 2.8E-45 303.6 13.4 137 263-403 28-170 (185)
27 2z6w_A Peptidyl-prolyl CIS-tra 100.0 1.7E-40 5.7E-45 296.7 14.7 146 124-269 15-160 (165)
28 1zkc_A Peptidyl-prolyl CIS-tra 100.0 1.2E-40 3.9E-45 304.6 13.9 137 263-403 31-170 (197)
29 2ok3_A Peptidyl-prolyl CIS-tra 100.0 1.4E-40 4.6E-45 296.3 13.7 146 118-267 1-149 (161)
30 2b71_A Cyclophilin-like protei 100.0 1.1E-40 3.8E-45 304.8 13.2 137 263-403 50-188 (196)
31 2fu0_A Cyclophilin, putative; 100.0 1.5E-40 5.2E-45 295.4 13.8 148 118-269 6-155 (160)
32 3pmp_A Cyclophilin A; peptidyl 100.0 4.5E-40 1.5E-44 293.9 15.1 146 124-269 14-159 (164)
33 2x7k_A Peptidyl-prolyl CIS-tra 100.0 2.8E-40 9.6E-45 295.4 13.3 148 118-269 12-161 (166)
34 2haq_A Cyclophilin; rotamase, 100.0 4E-40 1.4E-44 295.6 13.9 144 124-268 23-167 (172)
35 2igv_A Peptidyl-prolyl CIS-tra 100.0 4.8E-40 1.6E-44 295.9 14.2 146 124-269 15-167 (173)
36 1w74_A Peptidyl-prolyl CIS-tra 100.0 4E-40 1.4E-44 300.1 13.4 135 264-403 36-187 (191)
37 3ich_A Peptidyl-prolyl CIS-tra 100.0 8.7E-40 3E-44 297.5 15.3 146 124-269 27-173 (188)
38 2k7n_A Peptidyl-prolyl CIS-tra 100.0 3.8E-40 1.3E-44 302.3 12.1 137 263-403 23-161 (203)
39 2a2n_A Peptidylprolyl isomeras 100.0 7.7E-40 2.6E-44 294.9 13.6 148 118-269 22-172 (176)
40 1a58_A Cyclophilin; isomerase, 100.0 1.2E-39 4.2E-44 294.3 14.8 154 106-269 9-172 (177)
41 2poy_A Peptidyl-prolyl CIS-tra 100.0 1.5E-39 5.1E-44 295.4 15.2 146 124-269 31-183 (186)
42 3rdd_A Peptidyl-prolyl CIS-tra 100.0 1.8E-39 6.3E-44 294.6 15.7 152 118-269 23-179 (184)
43 1qng_A Peptidyl-prolyl CIS-tra 100.0 1.2E-39 4.1E-44 292.5 13.8 144 125-269 16-166 (170)
44 1zkc_A Peptidyl-prolyl CIS-tra 100.0 1.5E-39 5.1E-44 297.3 14.7 147 118-268 20-169 (197)
45 2wfi_A Peptidyl-prolyl CIS-tra 100.0 1.8E-39 6.2E-44 293.6 15.0 153 106-268 12-174 (179)
46 3bo7_A Peptidyl-prolyl CIS-tra 100.0 7.8E-40 2.7E-44 301.2 12.6 137 263-403 18-168 (201)
47 2poe_A Cyclophilin-like protei 100.0 1.3E-39 4.4E-44 295.7 13.6 147 118-268 17-169 (185)
48 2b71_A Cyclophilin-like protei 100.0 1.8E-39 6.1E-44 296.7 13.7 148 118-269 39-188 (196)
49 2c3b_A Ppiase, cyclophilin; is 100.0 2.9E-40 9.8E-45 297.0 8.0 159 106-268 5-167 (172)
50 2he9_A NK-tumor recognition pr 100.0 3.5E-39 1.2E-43 294.3 14.9 156 104-269 20-185 (192)
51 3k2c_A Peptidyl-prolyl CIS-tra 100.0 6.9E-39 2.4E-43 292.8 16.7 146 124-269 39-186 (193)
52 4fru_A Cyclophilin B, peptidyl 100.0 7E-39 2.4E-43 291.4 15.2 146 124-269 24-170 (185)
53 1ihg_A Cyclophilin 40; ppiase 100.0 3.6E-39 1.2E-43 322.9 13.9 148 256-403 23-180 (370)
54 3bo7_A Peptidyl-prolyl CIS-tra 100.0 7.8E-39 2.7E-43 294.5 13.8 146 118-267 7-166 (201)
55 2k7n_A Peptidyl-prolyl CIS-tra 100.0 4.5E-39 1.5E-43 295.2 11.7 148 118-269 12-161 (203)
56 1w74_A Peptidyl-prolyl CIS-tra 100.0 1.3E-38 4.3E-43 290.2 14.4 148 117-269 23-187 (191)
57 1mzw_A Cyclophilin H, U-snRNP- 100.0 1E-38 3.6E-43 288.1 13.2 146 124-269 22-173 (177)
58 1lop_A Cyclophilin A; rotamase 100.0 4.8E-39 1.6E-43 287.2 9.4 135 263-403 11-159 (164)
59 1v9t_A Cyclophilin B; beta bar 100.0 1.4E-38 4.8E-43 284.7 10.7 135 263-403 16-161 (166)
60 2hq6_A Serologically defined c 100.0 4.8E-38 1.6E-42 285.2 11.2 136 263-403 36-175 (185)
61 3s6m_A Peptidyl-prolyl CIS-tra 100.0 3.6E-38 1.2E-42 282.5 10.0 135 263-403 15-163 (167)
62 1lop_A Cyclophilin A; rotamase 100.0 4.3E-38 1.5E-42 281.1 10.4 144 119-268 1-158 (164)
63 1z81_A Cyclophilin; structural 100.0 1.4E-37 4.7E-42 290.1 14.0 146 124-269 71-225 (229)
64 1v9t_A Cyclophilin B; beta bar 100.0 9.2E-38 3.1E-42 279.4 12.2 145 118-268 5-160 (166)
65 3s6m_A Peptidyl-prolyl CIS-tra 100.0 9E-38 3.1E-42 279.9 11.4 146 118-269 4-163 (167)
66 2hq6_A Serologically defined c 100.0 5.3E-37 1.8E-41 278.3 14.8 146 118-268 25-174 (185)
67 2ose_A Probable peptidyl-proly 100.0 4.2E-37 1.4E-41 288.5 14.1 144 124-269 26-202 (234)
68 3bkp_A Cyclophilin; malaria, i 100.0 4.7E-37 1.6E-41 287.7 10.8 136 263-403 33-188 (232)
69 3bkp_A Cyclophilin; malaria, i 100.0 3.3E-36 1.1E-40 282.0 14.0 147 118-269 22-188 (232)
70 1ihg_A Cyclophilin 40; ppiase 100.0 5.9E-36 2E-40 299.5 16.0 152 118-269 16-180 (370)
71 3rfy_A Peptidyl-prolyl CIS-tra 100.0 1.3E-32 4.4E-37 271.8 15.5 132 118-254 171-345 (369)
72 3rfy_A Peptidyl-prolyl CIS-tra 100.0 1.7E-33 5.7E-38 278.2 5.8 130 263-402 190-354 (369)
73 2nnz_A Hypothetical protein; b 91.5 1.4 4.8E-05 37.9 10.2 109 118-253 30-144 (153)
74 3kop_A Uncharacterized protein 85.4 1.9 6.7E-05 37.9 6.8 105 129-251 35-165 (188)
75 3kop_A Uncharacterized protein 71.7 20 0.00067 31.5 8.8 105 264-386 36-166 (188)
76 1zx8_A Hypothetical protein TM 68.4 37 0.0013 28.3 9.6 104 118-253 13-125 (136)
77 3rjv_A Putative SEL1 repeat pr 63.2 4.2 0.00014 35.5 3.0 47 38-84 144-194 (212)
78 1klx_A Cysteine rich protein B 56.9 5.1 0.00017 32.6 2.2 44 42-86 44-89 (138)
79 3rjv_A Putative SEL1 repeat pr 56.3 6.1 0.00021 34.4 2.8 52 36-87 102-158 (212)
80 1klx_A Cysteine rich protein B 48.8 9.2 0.00032 31.0 2.5 50 36-86 74-125 (138)
81 4gcn_A Protein STI-1; structur 40.4 15 0.00052 28.9 2.5 50 36-87 21-71 (127)
82 3e4b_A ALGK; tetratricopeptide 32.8 9.9 0.00034 37.5 0.2 66 13-86 34-102 (452)
83 1na3_A Designed protein CTPR2; 31.3 20 0.0007 25.2 1.8 49 35-85 21-70 (91)
84 1ouv_A Conserved hypothetical 27.8 30 0.001 30.4 2.6 48 37-85 128-177 (273)
85 3ma5_A Tetratricopeptide repea 27.5 29 0.001 25.8 2.1 50 35-86 19-69 (100)
86 1ouv_A Conserved hypothetical 26.4 20 0.00067 31.7 1.0 30 38-68 201-230 (273)
87 2v5f_A Prolyl 4-hydroxylase su 25.9 29 0.00099 26.4 1.8 20 35-54 17-36 (104)
88 4abn_A Tetratricopeptide repea 25.7 7.4 0.00025 38.7 -2.2 71 13-86 212-286 (474)
89 2xm6_A Protein corresponding t 25.3 40 0.0014 33.0 3.1 50 36-86 344-395 (490)
90 3eab_A Spastin; spastin, MIT, 25.2 11 0.00038 29.2 -0.8 24 37-63 33-56 (89)
91 2kck_A TPR repeat; tetratricop 24.8 27 0.00094 25.2 1.5 17 39-55 56-72 (112)
92 2k9u_B Filamin-binding LIM pro 24.1 51 0.0017 19.2 2.1 21 343-363 1-21 (26)
93 3e4b_A ALGK; tetratricopeptide 22.3 54 0.0019 32.0 3.5 48 37-86 301-350 (452)
94 2hr2_A Hypothetical protein; a 20.6 49 0.0017 28.1 2.4 49 36-86 24-85 (159)
95 2dl1_A Spartin; SPG20, MIT, st 20.5 39 0.0014 27.4 1.6 41 37-80 36-76 (116)
No 1
>2z6w_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin D; HET: BMT MLE CIT; 0.96A {Homo sapiens} SCOP: b.62.1.1 PDB: 3rcg_A* 3r49_A* 3r54_A 3r56_A* 3r57_A* 3r59_A* 3rcf_A* 3r4g_A* 3rci_X* 3rck_X* 3rcl_A* 3rd9_X* 3rda_X* 3rdb_A* 3rdc_A* 2bit_X 2biu_X 3qyu_A 3k0m_A 1ak4_A* ...
Probab=100.00 E-value=2.6e-44 Score=321.38 Aligned_cols=148 Identities=76% Similarity=1.269 Sum_probs=139.6
Q ss_pred CCCCccccee--eeccccCCcchhhHHHhhcCCCCCccCCceEEeecCCeEEEeCcCCCCCCCCCcccCCCCCCCCCCCC
Q psy443 256 SQSGKTSKKI--VLRSDVVPKTAENFRALCTGEKGFGFKDSTFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKFEDENFTL 333 (403)
Q Consensus 256 t~~~~p~~~I--~L~~d~aP~t~enF~~L~~g~~g~~Y~g~~f~Rvi~~f~iqgGd~~~~~g~gg~~~~g~~~~~e~~~~ 333 (403)
...+.+.++| +|+.+.+|++++||++||+|++||+|+|+.||||+|+||+||||++.++|.|+.++||.+|++|++.+
T Consensus 11 ~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~fhRvi~~f~iQgGd~~~~~g~gg~si~g~~f~dE~~~l 90 (165)
T 2z6w_A 11 DANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGSRFPDENFTL 90 (165)
T ss_dssp EETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBEEEEETTTEEEECCTTTSSSSCCCBTTBSCBCCCCCCS
T ss_pred EECCEeeeEEEEEEeCCCCcHHHHHHHHHhccCCCccCcCCEEEEEECCCEEEeCCccCCCCCCCCcccCCcccCccccc
Confidence 3445566666 99999999999999999998899999999999999999999999988889999999999999999999
Q ss_pred CCCCCcEEEEecCCCCCCcceEEEEecCCCCCCCCceEEEEEEecHHHHHHHHhCCCCCCCccccEEEeC
Q psy443 334 KHTGPGILSMANAGPNTNGSQFFITTVKTAWLDNRHVVFGSVVEGLDVVKKLESMGSQSGKTSKKIVCFN 403 (403)
Q Consensus 334 ~h~~~G~lsma~~g~~s~gSqFfItl~~~~~Ld~~~~vfG~VieG~dvl~~i~~~~t~~~~P~~~i~I~~ 403 (403)
+|.++|+|||||.+|++|+|||||++.++|+||++|+|||+|++|||||++|+++++.+++|+++|+|.+
T Consensus 91 ~h~~~G~lsmA~~gp~s~~SQFfI~~~~~~~Ldg~~~vFG~Vv~G~dvv~~I~~~~~~~~~P~~~v~I~~ 160 (165)
T 2z6w_A 91 KHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIEGMDVVKKIESFGSKSGRTSKKIVITD 160 (165)
T ss_dssp CCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHTCCTTSCCSSCEEEEE
T ss_pred ccCCCCEEEEeeCCCCCcccEEEEEcCCCcccCCCeeEEEEEEcCHHHHHHHHhCCCCCCCCCCcEEEEE
Confidence 9999999999999999999999999999999999999999999999999999999998999999999974
No 2
>2cmt_A Peptidyl-prolyl CIS-trans isomerase E; rotamase activity, rotamase, RNA-binding, cyclosporin, cyclophilin, beta-barrel; 1.50A {Schistosoma mansoni} PDB: 2ck1_A
Probab=100.00 E-value=2.8e-44 Score=322.95 Aligned_cols=147 Identities=65% Similarity=1.139 Sum_probs=138.8
Q ss_pred CCCccccee--eeccccCCcchhhHHHhhcCCCCCccCCceEEeecCCeEEEeCcCCCCCCCCCcccCCCCCCCCCCCCC
Q psy443 257 QSGKTSKKI--VLRSDVVPKTAENFRALCTGEKGFGFKDSTFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKFEDENFTLK 334 (403)
Q Consensus 257 ~~~~p~~~I--~L~~d~aP~t~enF~~L~~g~~g~~Y~g~~f~Rvi~~f~iqgGd~~~~~g~gg~~~~g~~~~~e~~~~~ 334 (403)
..+.+.++| +|+.+.+|++++||++||++++|++|+|+.||||+|+||+||||++.++|.|+.++||.+|++|++.++
T Consensus 19 i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~G~gg~si~g~~f~dE~~~l~ 98 (172)
T 2cmt_A 19 IGNGDAGRIVMELRSDIVPRTAENFRALCTGERGFGYHNCCFHRVIPQFMCQGGDFVKGDGTGGKSIYGRKFDDENFQLR 98 (172)
T ss_dssp ETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBEEEEETTTEEEECCTTTSSSSCCCBTTBSCBCCCCCCSC
T ss_pred ECCeecceEEEEEcCCCCCHHHHHHHHHhccCCCceECCCEEEEEECCCEEEcCCccCCCCCCCCccCCCcccccccCcc
Confidence 344556665 999999999999999999988888899999999999999999999988899999999999999999999
Q ss_pred CCCCcEEEEecCCCCCCcceEEEEecCCCCCCCCceEEEEEEecHHHHHHHHhCCCCCCCccccEEEeC
Q psy443 335 HTGPGILSMANAGPNTNGSQFFITTVKTAWLDNRHVVFGSVVEGLDVVKKLESMGSQSGKTSKKIVCFN 403 (403)
Q Consensus 335 h~~~G~lsma~~g~~s~gSqFfItl~~~~~Ld~~~~vfG~VieG~dvl~~i~~~~t~~~~P~~~i~I~~ 403 (403)
|+++|+|||||.+|++|+|||||++.++|+||++|+|||+|++|||||++|+++++.+++|+++|+|.+
T Consensus 99 h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tvFG~Vv~G~dvv~~I~~~~~~~~~P~~~v~I~~ 167 (172)
T 2cmt_A 99 HEGFGVLSMANSGPNTNGSQFFICTTKCDWLDGKHVVFGRVVDGQNVVKKMESVGSKSGKVKEPVIISR 167 (172)
T ss_dssp CCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHGGGGCCTTCCCSSCEEEEE
T ss_pred cCCceEEEEeeCCCCCcccEEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHhCCCCCCCCCCCEEEEE
Confidence 999999999999999999999999999999999999999999999999999999999999999999974
No 3
>2r99_A Peptidyl-prolyl CIS-trans isomerase E; CIS-trans isomerization, structural genomics consortium, SGC, alternative splicing, mRNA processing; 1.61A {Homo sapiens} SCOP: b.62.1.1 PDB: 3uch_A 1zmf_A
Probab=100.00 E-value=3.9e-44 Score=322.41 Aligned_cols=146 Identities=71% Similarity=1.224 Sum_probs=138.5
Q ss_pred CCccccee--eeccccCCcchhhHHHhhcCCCCCccCCceEEeecCCeEEEeCcCCCCCCCCCcccCCCCCCCCCCCCCC
Q psy443 258 SGKTSKKI--VLRSDVVPKTAENFRALCTGEKGFGFKDSTFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKFEDENFTLKH 335 (403)
Q Consensus 258 ~~~p~~~I--~L~~d~aP~t~enF~~L~~g~~g~~Y~g~~f~Rvi~~f~iqgGd~~~~~g~gg~~~~g~~~~~e~~~~~h 335 (403)
.+.+.++| +|+.+.+|++++||++||+|++|++|+|+.||||+|+|||||||++.+++.|+.++||.+|++|++.++|
T Consensus 21 ~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~~f~dE~~~l~h 100 (173)
T 2r99_A 21 GNKPAGRIQMLLRSDVVPMTAENFRCLCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKH 100 (173)
T ss_dssp TTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBEEEEETTTEEEECCTTTSSSSCCCBTTBSCBCCCCCCSCC
T ss_pred CCccceeEEEEECCCCCcHHHHHHHHHhcccCCceecCCEEEEeeCCCEEEeCCcCCCCCCCCCccCCCcccCcccCccc
Confidence 34455665 9999999999999999999988988999999999999999999999889999999999999999999999
Q ss_pred CCCcEEEEecCCCCCCcceEEEEecCCCCCCCCceEEEEEEecHHHHHHHHhCCCCCCCccccEEEeC
Q psy443 336 TGPGILSMANAGPNTNGSQFFITTVKTAWLDNRHVVFGSVVEGLDVVKKLESMGSQSGKTSKKIVCFN 403 (403)
Q Consensus 336 ~~~G~lsma~~g~~s~gSqFfItl~~~~~Ld~~~~vfG~VieG~dvl~~i~~~~t~~~~P~~~i~I~~ 403 (403)
+++|+|||||.+||+|+|||||++.++|+||++|+|||+|++|||||++|+++++++++|+++|+|.+
T Consensus 101 ~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~~~~P~~~v~I~~ 168 (173)
T 2r99_A 101 TGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEAQGSKDGKPKQKVIIAD 168 (173)
T ss_dssp CSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTCCCSSCEEEEE
T ss_pred CCCcEEEEccCCCCCcccEEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHhCCCCCCCCCCCeEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999974
No 4
>2igv_A Peptidyl-prolyl CIS-trans isomerase 3; rotamase; 1.67A {Caenorhabditis elegans} SCOP: b.62.1.1 PDB: 1e3b_A 1e8k_A 1dyw_A 2igw_A 2hqj_A
Probab=100.00 E-value=4.1e-44 Score=322.43 Aligned_cols=148 Identities=72% Similarity=1.139 Sum_probs=138.5
Q ss_pred CCCCccccee--eeccccCCcchhhHHHhhcCCCCCc-------cCCceEEeecCCeEEEeCcCCCCCCCCCcccCCCCC
Q psy443 256 SQSGKTSKKI--VLRSDVVPKTAENFRALCTGEKGFG-------FKDSTFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKF 326 (403)
Q Consensus 256 t~~~~p~~~I--~L~~d~aP~t~enF~~L~~g~~g~~-------Y~g~~f~Rvi~~f~iqgGd~~~~~g~gg~~~~g~~~ 326 (403)
+..+++.++| +|+.+.+|++++||+.||++++|++ |+|+.||||+|+|||||||++.++|+|+.++||.+|
T Consensus 11 ~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G~gg~siyg~~f 90 (173)
T 2igv_A 11 TIGGKASGRIVMELYDDVVPKTAGNFRALCTGENGIGKSGKPLHFKGSKFHRIIPNFMIQGGDFTRGNGTGGESIYGEKF 90 (173)
T ss_dssp EETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETTTEEEECCTTTSSSSCCCBTTBSCB
T ss_pred EECCEecceEEEEEeCCCCcHHHHHHHHHhcCCCCCCccCccceECCCEEEEEECCCEEEcCCCCCCCCCCCCccCCCcc
Confidence 3455666776 9999999999999999999877732 999999999999999999999889999999999999
Q ss_pred CCCCCCCCCCCCcEEEEecCCCCCCcceEEEEecCCCCCCCCceEEEEEEecHHHHHHHHhCCCCCCCccccEEEeC
Q psy443 327 EDENFTLKHTGPGILSMANAGPNTNGSQFFITTVKTAWLDNRHVVFGSVVEGLDVVKKLESMGSQSGKTSKKIVCFN 403 (403)
Q Consensus 327 ~~e~~~~~h~~~G~lsma~~g~~s~gSqFfItl~~~~~Ld~~~~vfG~VieG~dvl~~i~~~~t~~~~P~~~i~I~~ 403 (403)
+||++.++|+++|+|||||.+||+|+|||||++.++|+||++|+|||+|++|||||++|+.+++.+++|+++|+|.+
T Consensus 91 ~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~vFG~Vv~G~dvv~~I~~~~t~~~~P~~~v~I~~ 167 (173)
T 2igv_A 91 PDENFKEKHTGPGVLSMANAGPNTNGSQFFLCTVKTEWLDGKHVVFGRVVEGLDVVKAVESNGSQSGKPVKDCMIAD 167 (173)
T ss_dssp CCCCCCSCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTSCCSSCEEEEE
T ss_pred cCcccccCCCCCeEEEEeeCCCCCcceEEEEEcCCccccCCCeeEEEEEecCHHHHHHHHhCCCCCCCCCCCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999974
No 5
>3pmp_A Cyclophilin A; peptidyl prolyl isomerase, isomerase-immunosuppressant compl; HET: BMT; 1.47A {Moniliophthora perniciosa} SCOP: b.62.1.1 PDB: 3o7t_A
Probab=100.00 E-value=8e-44 Score=318.14 Aligned_cols=148 Identities=68% Similarity=1.095 Sum_probs=140.3
Q ss_pred CCCCccccee--eeccccCCcchhhHHHhhcCCCCCccCCceEEeecCCeEEEeCcCCCCCCCCCcccCCCCCCCCCCCC
Q psy443 256 SQSGKTSKKI--VLRSDVVPKTAENFRALCTGEKGFGFKDSTFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKFEDENFTL 333 (403)
Q Consensus 256 t~~~~p~~~I--~L~~d~aP~t~enF~~L~~g~~g~~Y~g~~f~Rvi~~f~iqgGd~~~~~g~gg~~~~g~~~~~e~~~~ 333 (403)
...+.+.++| +|+.+.+|++++||++||+|+.|++|+|+.||||+|+||+||||+..+++.|+.++++.+|++|++.+
T Consensus 10 ~i~~t~~G~i~ieL~~~~aP~t~~nF~~L~~g~~g~~Y~g~~fhRvi~~f~iQgGd~~~~~g~gg~si~g~~~~dE~~~l 89 (164)
T 3pmp_A 10 SINDKPEGRIVFKLYDEAVPKTAKNFRELATGQHGFGYKDSIFHRVIPQFMLQGGDFTRHNGTGGKSIYGEKFADENFQV 89 (164)
T ss_dssp EETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBEEEEETTTEEEECCTTTSSSSCCCBTTBSCBCCCCCCS
T ss_pred EECCEEeeEEEEEEeCCCCcHHHHHHHHHhcccCCCcccCCEEEEEECCCeEEeCCCCCCCCCCCcccCCcccccccccc
Confidence 4445666666 99999999999999999998899999999999999999999999887899999999999999999999
Q ss_pred CCCCCcEEEEecCCCCCCcceEEEEecCCCCCCCCceEEEEEEecHHHHHHHHhCCCCCCCccccEEEeC
Q psy443 334 KHTGPGILSMANAGPNTNGSQFFITTVKTAWLDNRHVVFGSVVEGLDVVKKLESMGSQSGKTSKKIVCFN 403 (403)
Q Consensus 334 ~h~~~G~lsma~~g~~s~gSqFfItl~~~~~Ld~~~~vfG~VieG~dvl~~i~~~~t~~~~P~~~i~I~~ 403 (403)
+|+++|+|||||.+|++|+|||||++.++|+||++|+|||||++|||||++|+++++++++|+++|+|++
T Consensus 90 ~h~~~G~lsma~~g~~t~~SQFfIt~~~~~~Ld~~~~vFG~Vv~G~~vv~~I~~~~~~~~~P~~~v~I~~ 159 (164)
T 3pmp_A 90 KHTKPGLLSMANAGANTNGSQFFITTVPTSWLDGKHVVFGEVIEGLDIVRKVEGKGSASGKTNATIKITD 159 (164)
T ss_dssp CCCSTTEEEECBSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTCCCSSCEEEEE
T ss_pred CcCCCcEEEEeeCCCCCcccEEEEECCCChhhCCCccEEEEEeCCHHHHHHHHhCCCCCCCcccCEEEEe
Confidence 9999999999999999999999999999999999999999999999999999999999999999999975
No 6
>2poy_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, isomerase, S genomics, structural genomics consortium; HET: BMT; 1.80A {Cryptosporidium parvum iowa II} PDB: 2plu_A*
Probab=100.00 E-value=7.7e-44 Score=323.54 Aligned_cols=148 Identities=62% Similarity=1.021 Sum_probs=138.2
Q ss_pred CCCCccccee--eeccccCCcchhhHHHhhcCCCCCc-------cCCceEEeecCCeEEEeCcCCCCCCCCCcccCCCCC
Q psy443 256 SQSGKTSKKI--VLRSDVVPKTAENFRALCTGEKGFG-------FKDSTFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKF 326 (403)
Q Consensus 256 t~~~~p~~~I--~L~~d~aP~t~enF~~L~~g~~g~~-------Y~g~~f~Rvi~~f~iqgGd~~~~~g~gg~~~~g~~~ 326 (403)
.+.+.+.++| +|+.+.+|++++||+.||++++|++ |+|+.||||+|+|||||||++.++|+|+.++||.+|
T Consensus 27 ~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~Y~g~~FhRVi~~f~iQgGd~~~~~G~gg~si~g~~f 106 (186)
T 2poy_A 27 SIGQTPAGRITMELFADKVPITAENFRALCTGEKGMGQSGKPLCYTGSFFHRIIPQFMIQGGDFTRGDGTGGESIYGSKF 106 (186)
T ss_dssp EETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETTTEEEECCTTTSSSSCCCCTTC-CB
T ss_pred eECCEecccEEEEEeCCCCcHHHHHHHHHhcccCCccccCccceECCCEEEEEeCCCEEEeCCCCCCCCCCCCccCCCcc
Confidence 3345556666 9999999999999999999888885 999999999999999999998889999999999999
Q ss_pred CCCCCCCCCCCCcEEEEecCCCCCCcceEEEEecCCCCCCCCceEEEEEEecHHHHHHHHhCCCCCCCccccEEEeC
Q psy443 327 EDENFTLKHTGPGILSMANAGPNTNGSQFFITTVKTAWLDNRHVVFGSVVEGLDVVKKLESMGSQSGKTSKKIVCFN 403 (403)
Q Consensus 327 ~~e~~~~~h~~~G~lsma~~g~~s~gSqFfItl~~~~~Ld~~~~vfG~VieG~dvl~~i~~~~t~~~~P~~~i~I~~ 403 (403)
+||++.++|+++|+|||||.+|++|+|||||++.++|+||++|+|||+|++|||||++|+++++.+++|+++|+|.+
T Consensus 107 ~dE~~~l~h~~~G~lsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~P~~~v~I~~ 183 (186)
T 2poy_A 107 RDENFVYTHDAPFLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGKVLEGMEVVKSIEKCGSQNGKPTKSVCITA 183 (186)
T ss_dssp CCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHTCCTTSCCSSCEEEEE
T ss_pred cCcccccccCCCcEEEEeeCCCCCcccEEEEECCCCcccCCCeeEEEEEecCHHHHHHHHhCCCCCCCCCCCEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999975
No 7
>1qng_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, cyclophilin-cyclosporin complex, immunosuppressant, cyclophilin; HET: BMT; 2.1A {Plasmodium falciparum} SCOP: b.62.1.1 PDB: 1qnh_A*
Probab=100.00 E-value=9.4e-44 Score=319.21 Aligned_cols=147 Identities=59% Similarity=1.059 Sum_probs=137.6
Q ss_pred CCCCccccee--eeccccCCcchhhHHHhhcCCCCCc-------cCCceEEeecCCeEEEeCcCCCCCCCCCcccCCCCC
Q psy443 256 SQSGKTSKKI--VLRSDVVPKTAENFRALCTGEKGFG-------FKDSTFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKF 326 (403)
Q Consensus 256 t~~~~p~~~I--~L~~d~aP~t~enF~~L~~g~~g~~-------Y~g~~f~Rvi~~f~iqgGd~~~~~g~gg~~~~g~~~ 326 (403)
.+.+++.++| +|+.+.+|++++||++||+++ |++ |+++.||||+|+|||||||++.++++|+.++||.+|
T Consensus 11 ~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~-g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~~f 89 (170)
T 1qng_A 11 SIDNSNAGRIIFELFSDITPRTCENFRALCTGE-KIGSRGKNLHYKNSIFHRIIPQFMCQGGDITNGNGSGGESIYGRSF 89 (170)
T ss_dssp EESSSEEEEEEEEECTTTCHHHHHHHHHHHHTC-EECTTSSEECCTTCBCCEEETTTEEEECCTTTSSSSCCCBTTBSCB
T ss_pred eECCEeceeEEEEEcCCCCCHHHHHHHHHhccC-CcCccCccceECCCEEEEEECCCEEEcCCccCCCCCCCccccCCcc
Confidence 4455666776 999999999999999999765 554 999999999999999999998889999999999999
Q ss_pred CCCCCCCCCCCCcEEEEecCCCCCCcceEEEEecCCCCCCCCceEEEEEEecHHHHHHHHhCCCCCCCccccEEEeC
Q psy443 327 EDENFTLKHTGPGILSMANAGPNTNGSQFFITTVKTAWLDNRHVVFGSVVEGLDVVKKLESMGSQSGKTSKKIVCFN 403 (403)
Q Consensus 327 ~~e~~~~~h~~~G~lsma~~g~~s~gSqFfItl~~~~~Ld~~~~vfG~VieG~dvl~~i~~~~t~~~~P~~~i~I~~ 403 (403)
++|++.++|+++|+|||||.+|++|+|||||++.++|+||++|+|||+|++|||||++|+++++.+++|+++|+|.+
T Consensus 90 ~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~Ldg~~~vFG~Vv~G~dvv~~I~~~~t~~~~P~~~v~I~~ 166 (170)
T 1qng_A 90 TDENFNMKHDQPGLLSMANAGPNTNSSQFFITLVPCPWLDGKHVVFGKVIEGMNVVREMEKEGAKSGYVKRSVVITD 166 (170)
T ss_dssp CCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTCCCSSCEEEEE
T ss_pred cccccccccCCCCEEEEeecCCCCcccEEEEECCCCcccCCCeeEEEEEECCHHHHHHHHhCCCCCCCCCCCeEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999998899999999974
No 8
>2haq_A Cyclophilin; rotamase, proline, isomerase, CIS-trans, protozoa, KAla-AZAR.; 1.97A {Leishmania donovani} PDB: 3eov_A* 3bt8_A
Probab=100.00 E-value=1.2e-43 Score=318.46 Aligned_cols=147 Identities=60% Similarity=0.966 Sum_probs=138.2
Q ss_pred CCCCccccee--eeccccCCcchhhHHHhhcCCCCCccCCceEEeecCCeEEEeCcCCCCCCCCCcccCCCCCCCCCCCC
Q psy443 256 SQSGKTSKKI--VLRSDVVPKTAENFRALCTGEKGFGFKDSTFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKFEDENFTL 333 (403)
Q Consensus 256 t~~~~p~~~I--~L~~d~aP~t~enF~~L~~g~~g~~Y~g~~f~Rvi~~f~iqgGd~~~~~g~gg~~~~g~~~~~e~~~~ 333 (403)
...+.+.++| +|+.+.+|++++||++||+|++|++|+|+.||||+|+||+||||+..+++.|+.++||.+|++|++.+
T Consensus 19 ~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~~f~dE~~~l 98 (172)
T 2haq_A 19 MIDSEPLGRITIGLFGKDAPLTTENFRQLCTGEHGFGYKDSIFHRVIQNFMIQGGDFTNFDGTGGKSIYGEKFADENLNV 98 (172)
T ss_dssp EETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBCCEEETTTEEEECCTTTSSSSCCCCSSSSCBCCCCCCS
T ss_pred EECCEecceEEEEEeCCCCcHHHHHHHHHhccCCCcccCCCEEEEEECCCEEecCCccCCCCCCCccccCCcccCcCCCc
Confidence 4445566666 99999999999999999999999999999999999999999999877789999999999999999999
Q ss_pred CCCCCcEEEEecCCCCCCcceEEEEecCCCCCCCCceEEEEEEecHHHHHHHHhCCCCC-CCccccEEEeC
Q psy443 334 KHTGPGILSMANAGPNTNGSQFFITTVKTAWLDNRHVVFGSVVEGLDVVKKLESMGSQS-GKTSKKIVCFN 403 (403)
Q Consensus 334 ~h~~~G~lsma~~g~~s~gSqFfItl~~~~~Ld~~~~vfG~VieG~dvl~~i~~~~t~~-~~P~~~i~I~~ 403 (403)
+|. +|+|||||.+|++|+|||||+++++|+||++|+|||+|++|||||++|+++++++ ++|+++|+|.+
T Consensus 99 ~h~-~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~vFG~Vv~G~dvv~~I~~~~t~~~~~P~~~v~I~~ 168 (172)
T 2haq_A 99 KHF-VGALSMANAGPNTNGSQFFITTAPTPWLDGRHVVFGKVLDGMDVVLRIEKTKTNSHDRPVKPVKIVA 168 (172)
T ss_dssp CCC-TTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCGGGCBSSCEEEEE
T ss_pred ccC-ceEEEEccCCCCCcccEEEEECCCCCccCCCEeEEEEEeCCHHHHHHHHhCCcCCCCcCCCCeEEEE
Confidence 999 9999999999999999999999999999999999999999999999999999986 59999999974
No 9
>1a58_A Cyclophilin; isomerase, ppiase; 1.95A {Brugia malayi} SCOP: b.62.1.1 PDB: 1a33_A 1c5f_A*
Probab=100.00 E-value=2.4e-43 Score=318.49 Aligned_cols=147 Identities=54% Similarity=0.898 Sum_probs=136.8
Q ss_pred CCCCccccee--eeccccCCcchhhHHHhhcCCCC---------CccCCceEEeecCCeEEEeCcCCCCCCCCCcccCCC
Q psy443 256 SQSGKTSKKI--VLRSDVVPKTAENFRALCTGEKG---------FGFKDSTFHRVIPNFMCQGGDFTNHNGTGGKSIYGN 324 (403)
Q Consensus 256 t~~~~p~~~I--~L~~d~aP~t~enF~~L~~g~~g---------~~Y~g~~f~Rvi~~f~iqgGd~~~~~g~gg~~~~g~ 324 (403)
.+.+.+.++| +|+.+.+|+|++||+.||+++++ + |+|+.||||+|+|||||||++.+++.|++++||.
T Consensus 14 ~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~~~~g~~~~-Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~ 92 (177)
T 1a58_A 14 TIDGNLAGRIVMELYNDIAPRTCNNFLMLCTGMAGTGKISGKPLH-YKGSTFHRVIKNFMIQGGDFTKGDGTGGESIYGG 92 (177)
T ss_dssp EETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBCC-CTTCBEEEEETTTEEEECCCSSSSSSCCCCTTSS
T ss_pred EECCEeceeEEEEEcCCCCchHHHHHHHHhcCCcCcccccCCcce-eCCCEEEEEECCCEEEeCCccCCCCCCCCcccCC
Confidence 4455666776 99999999999999999987543 5 9999999999999999999988899999999999
Q ss_pred CCCCCCCCCCCCCCcEEEEecCCCCCCcceEEEEecCCCCCCCCceEEEEEEecHHHHHHHHhCCCCC-CCccccEEEeC
Q psy443 325 KFEDENFTLKHTGPGILSMANAGPNTNGSQFFITTVKTAWLDNRHVVFGSVVEGLDVVKKLESMGSQS-GKTSKKIVCFN 403 (403)
Q Consensus 325 ~~~~e~~~~~h~~~G~lsma~~g~~s~gSqFfItl~~~~~Ld~~~~vfG~VieG~dvl~~i~~~~t~~-~~P~~~i~I~~ 403 (403)
.|+||++.++|+++|+|||||.+|++|+|||||++.++|+||++|+|||+|++|||||++|++++++. ++|+++|+|.+
T Consensus 93 ~f~dE~~~~~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~VFG~Vv~G~dvv~~I~~~~~~~~~~P~~~v~I~~ 172 (177)
T 1a58_A 93 MFDDEEFVMKHDEPFVVSMANKGPNTNGSQFFITTTPAPHLNNIHVVFGKVVSGQEVVTKIEYLKTNSKNRPLADVVILN 172 (177)
T ss_dssp CBCCCCCCSCCCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSSCEEEEE
T ss_pred cccCcccCcccCCCeEEEEeeCCCCCceeEEEEECCCCCccCCCEEEEEEEEcCHHHHHHHHhCCCCCCCcCCCCeEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999975 89999999974
No 10
>2wfi_A Peptidyl-prolyl CIS-trans isomerase G; phosphoprotein, PRE-mRNA splicing, alternative splicing, nucleus, rotamase, cyclosporin; HET: OCS; 0.75A {Homo sapiens} PDB: 2wfj_A* 2gw2_A
Probab=100.00 E-value=3.5e-43 Score=317.89 Aligned_cols=147 Identities=50% Similarity=0.833 Sum_probs=136.6
Q ss_pred CCCCccccee--eeccccCCcchhhHHHhhcCCC---------CCccCCceEEeecCCeEEEeCcCCCCCCCCCcccCCC
Q psy443 256 SQSGKTSKKI--VLRSDVVPKTAENFRALCTGEK---------GFGFKDSTFHRVIPNFMCQGGDFTNHNGTGGKSIYGN 324 (403)
Q Consensus 256 t~~~~p~~~I--~L~~d~aP~t~enF~~L~~g~~---------g~~Y~g~~f~Rvi~~f~iqgGd~~~~~g~gg~~~~g~ 324 (403)
.+.+.+.++| +|+.+.+|+|++||+.||+|++ ++ |+++.||||+|+|||||||++.+++.|+.++||.
T Consensus 17 ~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~~-Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~ 95 (179)
T 2wfi_A 17 AINNQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLH-YKSCLFHRVVKDFMVQGGDFSEGNGRGGESIYGG 95 (179)
T ss_dssp EETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSC-CTTCBEEEEETTTEEEECCTTTSSSSCCCCTTSS
T ss_pred EECCccceEEEEEEcCCCCChHHHHHHHHhcCCcCcccccccCCe-ECCCEEEEEECCCEEEcccccCCCCCCCCcccCC
Confidence 3445566666 9999999999999999998754 45 9999999999999999999988889999999999
Q ss_pred CCCCCCCCCCCCCCcEEEEecCCCCCCcceEEEEecCCCCCCCCceEEEEEEecHHHHHHHHhCCCCC-CCccccEEEeC
Q psy443 325 KFEDENFTLKHTGPGILSMANAGPNTNGSQFFITTVKTAWLDNRHVVFGSVVEGLDVVKKLESMGSQS-GKTSKKIVCFN 403 (403)
Q Consensus 325 ~~~~e~~~~~h~~~G~lsma~~g~~s~gSqFfItl~~~~~Ld~~~~vfG~VieG~dvl~~i~~~~t~~-~~P~~~i~I~~ 403 (403)
.|+||++.++|+++|+|||||.+|++|+|||||++.++|+||++|+|||+|++|||||++|++++++. ++|+++|+|.+
T Consensus 96 ~f~dE~~~~~h~~~G~lsMAn~gp~tngSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~t~~~~~P~~~v~I~~ 175 (179)
T 2wfi_A 96 FFEDESFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIENQKTDAASKPFAEVRILS 175 (179)
T ss_dssp CBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTCCBCTTSCBSSCEEEEE
T ss_pred cccccccCcCcCCCeEEEEEeCCCCCcceEEEEEcCCCcccCCCeeEEEEEeCCHHHHHHHHcCCCCCCCCCCCCeEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999975 89999999974
No 11
>3ich_A Peptidyl-prolyl CIS-trans isomerase B; beta sandwich, cyclosporin, endoplasmic reticulum, glycoprot isomerase, rotamase; 1.20A {Homo sapiens} PDB: 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=3.7e-43 Score=319.78 Aligned_cols=146 Identities=62% Similarity=1.017 Sum_probs=137.3
Q ss_pred CCccccee--eeccccCCcchhhHHHhhcCCCCCccCCceEEeecCCeEEEeCcCCCCCCCCCcccCCCCCCCCCCCCCC
Q psy443 258 SGKTSKKI--VLRSDVVPKTAENFRALCTGEKGFGFKDSTFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKFEDENFTLKH 335 (403)
Q Consensus 258 ~~~p~~~I--~L~~d~aP~t~enF~~L~~g~~g~~Y~g~~f~Rvi~~f~iqgGd~~~~~g~gg~~~~g~~~~~e~~~~~h 335 (403)
.+.+.++| +|+.+.+|++++||+.||+|++|++|+|+.||||+|+|||||||+..++|.|+.++||.+|++|++.++|
T Consensus 25 ~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~~f~dE~~~l~h 104 (188)
T 3ich_A 25 GDEDVGRVIFGLFGKTVPKTVDNFVALATGEKGFGYKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDENFKLKH 104 (188)
T ss_dssp TTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBCCEEETTTEEEECCTTTSSSSCCCBTTBSCBCCCCCCSCC
T ss_pred CCEeceeEEEEEcCCCCcHHHHHHHHHhcccCCccccCCEEEEEECCCEEEcCCccCCCCCCCccccCCcccccccCccc
Confidence 34455665 9999999999999999999989999999999999999999999987778999999999999999999999
Q ss_pred CCCcEEEEecCCCCCCcceEEEEecCCCCCCCCceEEEEEEecHHHHHHHHhCCCCC-CCccccEEEeC
Q psy443 336 TGPGILSMANAGPNTNGSQFFITTVKTAWLDNRHVVFGSVVEGLDVVKKLESMGSQS-GKTSKKIVCFN 403 (403)
Q Consensus 336 ~~~G~lsma~~g~~s~gSqFfItl~~~~~Ld~~~~vfG~VieG~dvl~~i~~~~t~~-~~P~~~i~I~~ 403 (403)
+++|+|||||.+|++|+|||||+++++|+||++|+|||+|++|||||++|+++++++ ++|+++|+|.+
T Consensus 105 ~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~~~~~P~~~v~I~~ 173 (188)
T 3ich_A 105 YGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVESTKTDSRDKPLKDVIIAD 173 (188)
T ss_dssp CSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSSCEEEEE
T ss_pred CCCeEEEEccCCCCCcccEEEEECCCCcccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCeECCCEEEEE
Confidence 999999999999999999999999999999999999999999999999999999986 59999999974
No 12
>3rdd_A Peptidyl-prolyl CIS-trans isomerase A; beta barrel, cytosolic, inhibito isomerase-isomerase inhibitor complex; HET: EA4; 2.14A {Homo sapiens}
Probab=100.00 E-value=5.8e-43 Score=317.59 Aligned_cols=148 Identities=71% Similarity=1.170 Sum_probs=140.8
Q ss_pred CCCCccccee--eeccccCCcchhhHHHhhcCCCCCccCCceEEeecCCeEEEeCcCCCCCCCCCcccCCCCCCCCCCCC
Q psy443 256 SQSGKTSKKI--VLRSDVVPKTAENFRALCTGEKGFGFKDSTFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKFEDENFTL 333 (403)
Q Consensus 256 t~~~~p~~~I--~L~~d~aP~t~enF~~L~~g~~g~~Y~g~~f~Rvi~~f~iqgGd~~~~~g~gg~~~~g~~~~~e~~~~ 333 (403)
++.+++.++| +|+.+.+|++++||++||+++.|++|+|+.||||+|+|||||||+..+++.|+.++++..|++|++.+
T Consensus 30 ~i~~~~~G~I~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~~~~de~~~l 109 (184)
T 3rdd_A 30 AVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFIL 109 (184)
T ss_dssp EETTEEEEEEEEEECTTTSHHHHHHHHHHHHTTTSCSSTTCBCCEEETTTEEEECCTTTSSSSCCCBTTBSCBCCCCCCS
T ss_pred eECCEeeeEEEEEEeCCCCcHHHHHHHHHhccCcCcccCCCEEEEccCCcEEEeCCCCCCCCCCCcccCCCcccCccccc
Confidence 4456666776 99999999999999999999899999999999999999999999888899999999999999999999
Q ss_pred CCCCCcEEEEecCCCCCCcceEEEEecCCCCCCCCceEEEEEEecHHHHHHHHhCCCCCCCccccEEEeC
Q psy443 334 KHTGPGILSMANAGPNTNGSQFFITTVKTAWLDNRHVVFGSVVEGLDVVKKLESMGSQSGKTSKKIVCFN 403 (403)
Q Consensus 334 ~h~~~G~lsma~~g~~s~gSqFfItl~~~~~Ld~~~~vfG~VieG~dvl~~i~~~~t~~~~P~~~i~I~~ 403 (403)
+|+++|+|||||.+|++|+|||||+++++|+||++|+|||+|++|||||++|+++++++++|+++|+|++
T Consensus 110 ~h~~~G~lsmA~~gp~s~gSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~~g~P~~~v~I~~ 179 (184)
T 3rdd_A 110 KHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIAD 179 (184)
T ss_dssp CCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTSCCSSCEEEEE
T ss_pred ccCCCcEEEEEeCCCCCcccEEEEEeCCchhhCCCceEEEEEecCHHHHHHHHhcCCCCCCCcCCeEEEe
Confidence 9999999999999999999999999999999999999999999999999999999999999999999975
No 13
>2he9_A NK-tumor recognition protein; cyclosporin, isomerase, membrane, repeat, rotamase, peptidylprolyl isomerase, structural genomics; 2.00A {Homo sapiens}
Probab=100.00 E-value=8.3e-43 Score=318.24 Aligned_cols=147 Identities=49% Similarity=0.819 Sum_probs=136.4
Q ss_pred CCCCccccee--eeccccCCcchhhHHHhhcCCC---------CCccCCceEEeecCCeEEEeCcCCCCCCCCCcccCCC
Q psy443 256 SQSGKTSKKI--VLRSDVVPKTAENFRALCTGEK---------GFGFKDSTFHRVIPNFMCQGGDFTNHNGTGGKSIYGN 324 (403)
Q Consensus 256 t~~~~p~~~I--~L~~d~aP~t~enF~~L~~g~~---------g~~Y~g~~f~Rvi~~f~iqgGd~~~~~g~gg~~~~g~ 324 (403)
.+.+.+.++| +|+.+.+|++++||+.||+|++ ++ |+|+.||||+|+|||||||++.+++.|+.++||.
T Consensus 27 ~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~k~~~-Y~g~~FhRVi~~fmiQgGd~~~~~G~gg~siyg~ 105 (192)
T 2he9_A 27 EINREPVGRIMFQLFSDICPKTCKNFLCLCSGEKGLGKTTGKKLC-YKGSTFHRVVKNFMIQGGDFSEGNGKGGESIYGG 105 (192)
T ss_dssp EETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSC-CTTCBEEEEETTTEEEECCTTTSSSSCCCCTTSS
T ss_pred EECCEecceEEEEEcCCCCchHHHHHHHHhcCCCCcccccccCCe-ECCCEEEEEECCCEEEcCcccCCCCCCCCcccCC
Confidence 3445556666 9999999999999999998754 46 9999999999999999999988899999999999
Q ss_pred CCCCCCCCCCCCCCcEEEEecCCCCCCcceEEEEecCCCCCCCCceEEEEEEecHHHHHHHHhCCCCC-CCccccEEEeC
Q psy443 325 KFEDENFTLKHTGPGILSMANAGPNTNGSQFFITTVKTAWLDNRHVVFGSVVEGLDVVKKLESMGSQS-GKTSKKIVCFN 403 (403)
Q Consensus 325 ~~~~e~~~~~h~~~G~lsma~~g~~s~gSqFfItl~~~~~Ld~~~~vfG~VieG~dvl~~i~~~~t~~-~~P~~~i~I~~ 403 (403)
.|+||++.++|+++|+|||||.+|++|+||||||+.++|+||++|+|||+|++|||||++|++++++. ++|+++|+|.+
T Consensus 106 ~f~dE~~~l~h~~~G~lsMAn~gp~tngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P~~~v~I~~ 185 (192)
T 2he9_A 106 YFKDENFILKHDRAFLLSMANRGKHTNGSQFFITTKPAPHLDGVHVVFGLVISGFEVIEQIENLKTDAASRPYADVRVID 185 (192)
T ss_dssp CBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSSCEEEEE
T ss_pred cccCccccCCCCCCeEEEEEeCCCCCcceEEEEEcCCCcccCCCccEEEEEEeCHHHHHHHHcCCcCCCCCCcCCeEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999975 89999999974
No 14
>4fru_A Cyclophilin B, peptidyl-prolyl CIS-trans isomerase; cyclophilin-type ppiase, peptidyl-prolyl CIS-trans isomerase chaperone, foldase; HET: ME2 PEG; 1.10A {Equus caballus} PDB: 4frv_A* 3ich_A 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=1.3e-42 Score=315.89 Aligned_cols=148 Identities=60% Similarity=0.990 Sum_probs=139.1
Q ss_pred CCCCccccee--eeccccCCcchhhHHHhhcCCCCCccCCceEEeecCCeEEEeCcCCCCCCCCCcccCCCCCCCCCCCC
Q psy443 256 SQSGKTSKKI--VLRSDVVPKTAENFRALCTGEKGFGFKDSTFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKFEDENFTL 333 (403)
Q Consensus 256 t~~~~p~~~I--~L~~d~aP~t~enF~~L~~g~~g~~Y~g~~f~Rvi~~f~iqgGd~~~~~g~gg~~~~g~~~~~e~~~~ 333 (403)
+..+++.++| +|+.+.+|++++||++||++++|+.|+|+.||||+|+|||||||++.+++.|+.++++..|++|++.+
T Consensus 20 ~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~~f~de~~~~ 99 (185)
T 4fru_A 20 RIGDEDIGRVVIGLFGKTVPKTVDNFVALATGEKGFGYKDSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDENFKL 99 (185)
T ss_dssp EETTEEEEEEEEEECTTTSHHHHHHHHHHHHTTTSCCSTTCBCCEEETTTEEEECCTTTSSSSCCCBTTBSCBCCCCCCS
T ss_pred EECCEecceEEEEEeCCCCcHHHHHHHHHHhcCCCCeEcCCEEEEeeCCCeEEECCCCCCCCCCCccccCCccCcccccc
Confidence 4456667777 99999999999999999998888449999999999999999999998899999999999999999999
Q ss_pred CCCCCcEEEEecCCCCCCcceEEEEecCCCCCCCCceEEEEEEecHHHHHHHHhCCCCC-CCccccEEEeC
Q psy443 334 KHTGPGILSMANAGPNTNGSQFFITTVKTAWLDNRHVVFGSVVEGLDVVKKLESMGSQS-GKTSKKIVCFN 403 (403)
Q Consensus 334 ~h~~~G~lsma~~g~~s~gSqFfItl~~~~~Ld~~~~vfG~VieG~dvl~~i~~~~t~~-~~P~~~i~I~~ 403 (403)
+|+++|+|||||.+|++|+|||||++.++|+||++|+|||||++|||||++|++++++. ++|+++|+|.+
T Consensus 100 ~h~~~G~lsma~~gp~t~~SQFfI~~~~~~~Ld~~~~vFG~Vv~G~dvv~~I~~~~t~~~~~P~~~v~I~~ 170 (185)
T 4fru_A 100 KHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVETTKTDGRDKPLKDVTIAD 170 (185)
T ss_dssp CCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSSCEEEEE
T ss_pred CcCCCeEEEEeeCCCCCcceEEEEEeCCCcccCCCccEEEEEeCCHHHHHHHHhCCCCCCCcCCCCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999975 89999999974
No 15
>3k2c_A Peptidyl-prolyl CIS-trans isomerase; ssgcid, NIH, niaid, SBRI, UW, decode, cytoplasm, rotamase, structural genomics; HET: PG5; 1.95A {Encephalitozoon cuniculi}
Probab=100.00 E-value=3.6e-42 Score=314.50 Aligned_cols=148 Identities=61% Similarity=1.012 Sum_probs=140.0
Q ss_pred CCCCccccee--eeccccCCcchhhHHHhhcCCCCCccCCceEEeecCCeEEEeCcCCCCCCCCCcccCCCCCCCCCCCC
Q psy443 256 SQSGKTSKKI--VLRSDVVPKTAENFRALCTGEKGFGFKDSTFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKFEDENFTL 333 (403)
Q Consensus 256 t~~~~p~~~I--~L~~d~aP~t~enF~~L~~g~~g~~Y~g~~f~Rvi~~f~iqgGd~~~~~g~gg~~~~g~~~~~e~~~~ 333 (403)
...+.+.++| +|+.+.+|++++||+.||++++|++|+++.||||+|+||+||||+..+.+.|+.++++..|++|++.+
T Consensus 35 ~i~~t~~G~I~ieL~~~~aP~tv~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~~f~dE~~~l 114 (193)
T 3k2c_A 35 YANEESLGRIVMKLEDDIVPKTAKNFRTLCERPKGEGYKGSTFHRIIPGFMVQGGDYTAHNGTGGRSIYGEKFPDENFEL 114 (193)
T ss_dssp EETTEEEEEEEEEECTTTSHHHHHHHHHHHHSCTTSSSTTCBEEEEETTTEEEECCTTTSSSSCCCCTTSSCBCCCCCCS
T ss_pred eECCEEeeEEEEEEcCCCChHHHHHHHHHhccccCCcccCCEEEEEeCCCEEEeCCCCCCCCcCCcccCCCccccccccc
Confidence 4445566666 99999999999999999998888889999999999999999999888899999999999999999999
Q ss_pred CCCCCcEEEEecCCCCCCcceEEEEecCCCCCCCCceEEEEEEecHHHHHHHHhCCCCCCCcc--ccEEEeC
Q psy443 334 KHTGPGILSMANAGPNTNGSQFFITTVKTAWLDNRHVVFGSVVEGLDVVKKLESMGSQSGKTS--KKIVCFN 403 (403)
Q Consensus 334 ~h~~~G~lsma~~g~~s~gSqFfItl~~~~~Ld~~~~vfG~VieG~dvl~~i~~~~t~~~~P~--~~i~I~~ 403 (403)
+|+++|+|||||.+|++|+|||||+++++|+||++|+|||||++|||||++|+++++++++|+ ++|+|.+
T Consensus 115 ~h~~~G~lsmAn~gp~t~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~g~P~~~~~v~I~~ 186 (193)
T 3k2c_A 115 KHTKEGILSMANCGAHTNGSQFFITLGKTQWLDEKHVVFGEVVEGMDVVHKIAKYGSESGQVKKGYRIEIRD 186 (193)
T ss_dssp CCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTCCCCTTCCEEEEE
T ss_pred ccCCCcEEEEEeCCCCCCccEEEEECCCCcccCCCccEEEEEeCCHHHHHHHHhcCCCCCcCccCccEEEEE
Confidence 999999999999999999999999999999999999999999999999999999999999999 9999975
No 16
>1mzw_A Cyclophilin H, U-snRNP-ASSOCIATED cyclophilin; cyclophilin, peptidyl-prolyl-CIS/trans isomerase, spliceosome, U4/U6-60K protein, WD protein; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1qoi_A
Probab=100.00 E-value=1.4e-42 Score=313.48 Aligned_cols=147 Identities=54% Similarity=0.934 Sum_probs=135.4
Q ss_pred CCCccccee--eeccccCCcchhhHHHhhcCCCC-----CccCCceEEeecCCeEEEeCcCCCCCCCCCcccCCCCCCCC
Q psy443 257 QSGKTSKKI--VLRSDVVPKTAENFRALCTGEKG-----FGFKDSTFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKFEDE 329 (403)
Q Consensus 257 ~~~~p~~~I--~L~~d~aP~t~enF~~L~~g~~g-----~~Y~g~~f~Rvi~~f~iqgGd~~~~~g~gg~~~~g~~~~~e 329 (403)
..+.+.++| +|+.+.+|++++||++||+++.+ ++|+|+.||||+|+|||||||++.++|.|+.++||.+|++|
T Consensus 19 i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G~gg~si~g~~f~dE 98 (177)
T 1mzw_A 19 IGGQEVGRMKIELFADVVPKTAENFRQFCTGEFRKDGVPIGYKGSTFHRVIKDFMIQGGDFVNGDGTGVASIYRGPFADE 98 (177)
T ss_dssp ETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCEETTEECSSTTCBCCEEETTTEEEECCTTTSSSCCCCCTTSSCBCCC
T ss_pred ECCeeceeEEEEEcCCCCcHHHHHHHHHHhcccCCcCccceECCCEEEEEECCCEEEcCCcccCCCCCCCccCCCcccCc
Confidence 344556665 99999999999999999976553 24999999999999999999998889999999999999999
Q ss_pred CCCCCCCCCcEEEEecCCCCCCcceEEEEecCCCCCCCCceEEEEEEecHHHHHHHHhCCCC-CCCccccEEEeC
Q psy443 330 NFTLKHTGPGILSMANAGPNTNGSQFFITTVKTAWLDNRHVVFGSVVEGLDVVKKLESMGSQ-SGKTSKKIVCFN 403 (403)
Q Consensus 330 ~~~~~h~~~G~lsma~~g~~s~gSqFfItl~~~~~Ld~~~~vfG~VieG~dvl~~i~~~~t~-~~~P~~~i~I~~ 403 (403)
++.++|+++|+|||||.+|++|+|||||+++++|+||++|+|||+|++|||||++|++++++ +++|+++|+|.+
T Consensus 99 ~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~VFG~Vv~G~dvv~~I~~~~t~~~~~P~~~v~I~~ 173 (177)
T 1mzw_A 99 NFKLRHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGKHVVFGKIIDGLLVMRKIENVPTGPNNKPKLPVVISQ 173 (177)
T ss_dssp CCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCGGGCBSSCEEEEE
T ss_pred ccccccCCCCEEEEccCCCCCcceEEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCCCCCCEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999995 589999999974
No 17
>2c3b_A Ppiase, cyclophilin; isomerase, 3D domain swapping, misfolding, Asp F 11, allergen, rotamase; 1.85A {Aspergillus fumigatus} SCOP: b.62.1.1
Probab=100.00 E-value=4.8e-43 Score=315.03 Aligned_cols=141 Identities=62% Similarity=1.028 Sum_probs=105.4
Q ss_pred cee--eeccccCCcchhhHHHhhcCCCCCccCCceEEeecCCeEEEeCcCCCCCCCCCcccCCCCCCCCCCCCCCCCCcE
Q psy443 263 KKI--VLRSDVVPKTAENFRALCTGEKGFGFKDSTFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGI 340 (403)
Q Consensus 263 ~~I--~L~~d~aP~t~enF~~L~~g~~g~~Y~g~~f~Rvi~~f~iqgGd~~~~~g~gg~~~~g~~~~~e~~~~~h~~~G~ 340 (403)
++| +|+.+.+|++++||++||+|++|++|+++.||||+|+||+||||+..++|.|++++||.+|++|+..++|+++|+
T Consensus 22 G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~fhRvi~~f~iQgGd~~~~~g~gg~si~g~~f~dE~~~~~h~~~G~ 101 (172)
T 2c3b_A 22 GRIVFNLFDKDVPKTAKNFRELCKRPAGEGYRESTFHRIIPNFMIQGGDFTRGNGTGGRSIYGDKFADENFSRKHDKKGI 101 (172)
T ss_dssp EEEEEEECTTTSHHHHHHHHHHHHSCTTTSSTTCBCCEEETTTEEEECC----------------------CHHHHHTCE
T ss_pred ccEEEEEcCCCCcHHHHHHHHHhccCCCcccCCCEEEEEeCCCEEEeCCcCCCCCCCCcccCCCcccCcccccccCCCeE
Confidence 554 999999999999999999988998899999999999999999997667899999999999999999999999999
Q ss_pred EEEecCCCCCCcceEEEEecCCCCCCCCceEEEEEEe--cHHHHHHHHhCCCCCC--CccccEEEeC
Q psy443 341 LSMANAGPNTNGSQFFITTVKTAWLDNRHVVFGSVVE--GLDVVKKLESMGSQSG--KTSKKIVCFN 403 (403)
Q Consensus 341 lsma~~g~~s~gSqFfItl~~~~~Ld~~~~vfG~Vie--G~dvl~~i~~~~t~~~--~P~~~i~I~~ 403 (403)
|||||.+|++|+|||||++.++|+||++|+|||+|++ |||||++|++++++++ +|+++|+|.+
T Consensus 102 lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tvFG~Vv~~~G~dvv~~I~~~~t~~~~~~P~~~v~I~~ 168 (172)
T 2c3b_A 102 LSMANAGPNTNGSQFFITTAVTSWLDGKHVVFGEVADEKSYSVVKEIEALGSSSGSVRSNTRPKIVN 168 (172)
T ss_dssp EEEC---------CEEEECSCCTTCCSCCEEEEEECSHHHHHHHHHHHTTCCTTSCCCSSSCCEEEE
T ss_pred EEEeeCCCCCcccEEEEECCCCCccCCCeeEEEEEEecCCHHHHHHHHhCCCCCCCccCCCCeEEEe
Confidence 9999999999999999999999999999999999999 9999999999999875 9999999974
No 18
>2fu0_A Cyclophilin, putative; PFE0505W, cyclosporin-binding domain, structura genomics, structural genomics consortium, SGC, unknown FUNC; 1.80A {Plasmodium falciparum} SCOP: b.62.1.1
Probab=100.00 E-value=7.7e-42 Score=303.75 Aligned_cols=137 Identities=47% Similarity=0.785 Sum_probs=129.0
Q ss_pred ceeeeccccCCcchhhHHHhhcCCCCCccCCceEEeecCCeEEEeCcCCCCCCCCCcccCCCCCCCCCC-CCCCCCCcEE
Q psy443 263 KKIVLRSDVVPKTAENFRALCTGEKGFGFKDSTFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKFEDENF-TLKHTGPGIL 341 (403)
Q Consensus 263 ~~I~L~~d~aP~t~enF~~L~~g~~g~~Y~g~~f~Rvi~~f~iqgGd~~~~~g~gg~~~~g~~~~~e~~-~~~h~~~G~l 341 (403)
..|+|+.+.+|++++||++|| +.|| |+|+.||||+|+||+||||+.+ +|.|++++||.+|++|.. .++|+++|+|
T Consensus 17 i~ieL~~~~aP~t~~NF~~L~--~~g~-Y~g~~fhRvi~~f~iQgGd~~~-~g~gg~si~g~~~~dE~~~~l~h~~~G~l 92 (160)
T 2fu0_A 17 IHISLFYKECKKTVQNFSVHS--INGY-YNNCIFHRVIKHFMVQTGDPSG-DGTGGESIWGNEFEDEFFDHLNHSKPFMV 92 (160)
T ss_dssp EEEEECTTTCHHHHHHHHHHH--HTTT-TTTCBCCEEETTTEEEECCTTS-SSSCCCCTTSSCBCCCCBTTBCSSSSSEE
T ss_pred EEEEEeCCCChHHHHHHHHHh--ccCc-cCCCEEEEEECCCEEEeCCcCC-CCCCCCcccCCCccccccCCcccCCceEE
Confidence 345999999999999999999 6788 9999999999999999999975 788999999999999987 6899999999
Q ss_pred EEecCCCCCCcceEEEEecCCCCCCCCceEEEEEEecHHHHHHHHhCCCC-CCCccccEEEeC
Q psy443 342 SMANAGPNTNGSQFFITTVKTAWLDNRHVVFGSVVEGLDVVKKLESMGSQ-SGKTSKKIVCFN 403 (403)
Q Consensus 342 sma~~g~~s~gSqFfItl~~~~~Ld~~~~vfG~VieG~dvl~~i~~~~t~-~~~P~~~i~I~~ 403 (403)
||||.+|++|+|||||+++++|+||++|+|||+|++|||||++|++++++ +++|+++|+|.+
T Consensus 93 smA~~gp~s~~SQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~t~~~~~P~~~v~I~~ 155 (160)
T 2fu0_A 93 SMANCGPNTNGSQFFITTVPCPWLDFKHTVFGKVTQGSKIVLDIEKVRTDKRDKPLEDIKILN 155 (160)
T ss_dssp EECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSSCCBEEE
T ss_pred EEecCCCCCcccEEEEECCCCCccCCCcEEEEEEEcCHHHHHHHHhCCcCCCCCcCCCeEEEE
Confidence 99999999999999999999999999999999999999999999999997 589999999863
No 19
>2a2n_A Peptidylprolyl isomerase domain and WD repeat CON; CIS-trans isomerization, protein-folding, peptidylprolyl ISO structural genomics; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=2e-41 Score=305.28 Aligned_cols=136 Identities=49% Similarity=0.802 Sum_probs=128.9
Q ss_pred eeeeccccCCcchhhHHHhhcCCCCCccCCceEEeecCCeEEEeCcCCCCCCCCCcccCCCCCCCCCC-CCCCCCCcEEE
Q psy443 264 KIVLRSDVVPKTAENFRALCTGEKGFGFKDSTFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKFEDENF-TLKHTGPGILS 342 (403)
Q Consensus 264 ~I~L~~d~aP~t~enF~~L~~g~~g~~Y~g~~f~Rvi~~f~iqgGd~~~~~g~gg~~~~g~~~~~e~~-~~~h~~~G~ls 342 (403)
.|+|+.+.+|++++||+.|| +.|| |+|+.||||+|+||+||||+.+ ++.|+.++||.+|++|.. .++|+++|+||
T Consensus 34 ~ieL~~~~aP~t~~NF~~L~--~~g~-Y~g~~FhRvi~~f~iQgGd~~~-~g~gg~si~g~~~~dE~~~~l~h~~~G~ls 109 (176)
T 2a2n_A 34 HTKLFPVECPKTVENFCVHS--RNGY-YNGHTFHRIIKGFMIQTGDPTG-TGMGGESIWGGEFEDEFHSTLRHDRPYTLS 109 (176)
T ss_dssp EEEECTTTCHHHHHHHHHHH--HTTT-TTTCBCCEEETTTEEEECCTTS-SSSCCCCTTSSCBCCCCCTTCCSCSSSEEE
T ss_pred EEEEeCCCChHHHHHHHHHh--hcCc-cCCCEEEEEECCcEEEccCCCC-CCCCCCcccCCccccccccccccCCceEEE
Confidence 44999999999999999999 6788 9999999999999999999975 788999999999999988 69999999999
Q ss_pred EecCCCCCCcceEEEEecCCCCCCCCceEEEEEEecHHHHHHHHhCCCC--CCCccccEEEeC
Q psy443 343 MANAGPNTNGSQFFITTVKTAWLDNRHVVFGSVVEGLDVVKKLESMGSQ--SGKTSKKIVCFN 403 (403)
Q Consensus 343 ma~~g~~s~gSqFfItl~~~~~Ld~~~~vfG~VieG~dvl~~i~~~~t~--~~~P~~~i~I~~ 403 (403)
|||.+|++|+|||||+++++|+||++|+|||+|++|||||++|++++++ +++|+++|+|.+
T Consensus 110 mA~~gp~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~~P~~~v~I~~ 172 (176)
T 2a2n_A 110 MANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVTKGMEVVQRISNVKVNPKTDKPYEDVSIIN 172 (176)
T ss_dssp ECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTTCCBSSCCBEEE
T ss_pred EEeCCCCCcccEEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHcCCccCCCCccCCCeEEEE
Confidence 9999999999999999999999999999999999999999999999998 689999999963
No 20
>2x7k_A Peptidyl-prolyl CIS-trans isomerase-like 1; isomerase-immunosuppressant complex, immunosuppressant; HET: MLE MVA BMT ABA SAR; 1.15A {Homo sapiens} PDB: 1xwn_A
Probab=100.00 E-value=1.8e-41 Score=303.15 Aligned_cols=137 Identities=45% Similarity=0.823 Sum_probs=129.1
Q ss_pred ceeeeccccCCcchhhHHHhhcCCCCCccCCceEEeecCCeEEEeCcCCCCCCCCCcccCCCCCCCCC-CCCCCCCCcEE
Q psy443 263 KKIVLRSDVVPKTAENFRALCTGEKGFGFKDSTFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKFEDEN-FTLKHTGPGIL 341 (403)
Q Consensus 263 ~~I~L~~d~aP~t~enF~~L~~g~~g~~Y~g~~f~Rvi~~f~iqgGd~~~~~g~gg~~~~g~~~~~e~-~~~~h~~~G~l 341 (403)
..|+|+.+.+|++++||++|| +.|| |+|+.||||+|+||+||||+++ ++.|+.++||..|++|. ..++|.++|+|
T Consensus 23 i~ieL~~~~aP~t~~NF~~L~--~~g~-Y~g~~fhRvi~~f~iQgGd~~~-~g~gg~si~g~~~~dE~~~~l~h~~~G~l 98 (166)
T 2x7k_A 23 IVLELYWKHAPKTCKNFAELA--RRGY-YNGTKFHRIIKDFMIQGGDPTG-TGRGGASIYGKQFEDELHPDLKFTGAGIL 98 (166)
T ss_dssp EEEEECTTTCHHHHHHHHHHH--HHTT-TTTEECCEEETTTEEEECCTTS-SSSCCCCTTSSCBCCCCCTTSCCCSTTEE
T ss_pred EEEEEccCCCCHHHHHHHHHH--hcCC-CCCCEEEEEECCCEEEcCCCCC-CCCCCCccCCCccccccccccCCCCCeEE
Confidence 345999999999999999999 6788 9999999999999999999985 78899999999999998 47899999999
Q ss_pred EEecCCCCCCcceEEEEecCCCCCCCCceEEEEEEecHHHHHHHHhCCCCC-CCccccEEEeC
Q psy443 342 SMANAGPNTNGSQFFITTVKTAWLDNRHVVFGSVVEGLDVVKKLESMGSQS-GKTSKKIVCFN 403 (403)
Q Consensus 342 sma~~g~~s~gSqFfItl~~~~~Ld~~~~vfG~VieG~dvl~~i~~~~t~~-~~P~~~i~I~~ 403 (403)
||||.+|++|+|||||+++++|+||++|+|||+|++|||||++|+.+++++ ++|+++|+|.+
T Consensus 99 smAn~gp~s~gSQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~t~~~~~P~~~i~I~~ 161 (166)
T 2x7k_A 99 AMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQDRPVDDVKIIK 161 (166)
T ss_dssp EECBSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHTTSCBCTTSCBSSCCEEEE
T ss_pred EEeeCCCCCccceEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHcCCcCCCCCcCCCeEEEE
Confidence 999999999999999999999999999999999999999999999999976 79999999964
No 21
>1z81_A Cyclophilin; structural genomics, structural genomics consortium, SGC, isomerase; 2.80A {Plasmodium yoelii yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=2.5e-41 Score=315.30 Aligned_cols=148 Identities=52% Similarity=0.889 Sum_probs=136.5
Q ss_pred CCCCccccee--eeccccCCcchhhHHHhhcCCCCC-----ccCCceEEeecCCeEEEeCcCCCCCCCCCcccCCCCCCC
Q psy443 256 SQSGKTSKKI--VLRSDVVPKTAENFRALCTGEKGF-----GFKDSTFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKFED 328 (403)
Q Consensus 256 t~~~~p~~~I--~L~~d~aP~t~enF~~L~~g~~g~-----~Y~g~~f~Rvi~~f~iqgGd~~~~~g~gg~~~~g~~~~~ 328 (403)
+..+.+.++| +|+.+.+|++++||+.||+++.+. .|+++.||||+|+|||||||++.++|.|+.++||.+|+|
T Consensus 67 si~~t~~G~I~ieL~~d~aP~tv~NF~~L~~~~~g~~g~~~~Y~gt~FHRVi~~FmiQgGD~~~g~G~Gg~siyg~~f~d 146 (229)
T 1z81_A 67 NLGNNFLGKFKFELFQNIVPKTSENFRQFCTGEYKVNNLPVGYKNTIFHRVIKEFMIQGGDFINHNGSGSLSIYGEKFDD 146 (229)
T ss_dssp EETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCBSSSSBCSSTTEECCEEETTTEEEECCTTTSSSCCCCBTTBSCCCC
T ss_pred eECCeecccEEEEEcCCCCCHHHHHHHHHhhCCCCCcCCCceECCCEEEEEeCCCEEEcCCCcCCCCCCCCccCCCcccc
Confidence 3344556666 999999999999999999876531 399999999999999999999888999999999999999
Q ss_pred CCCCCCCCCCcEEEEecCCCCCCcceEEEEecCCCCCCCCceEEEEEE--ecHHHHHHHHhCCCCC--CCccccEEEeC
Q psy443 329 ENFTLKHTGPGILSMANAGPNTNGSQFFITTVKTAWLDNRHVVFGSVV--EGLDVVKKLESMGSQS--GKTSKKIVCFN 403 (403)
Q Consensus 329 e~~~~~h~~~G~lsma~~g~~s~gSqFfItl~~~~~Ld~~~~vfG~Vi--eG~dvl~~i~~~~t~~--~~P~~~i~I~~ 403 (403)
|++.++|+++|+|||||.+|++|+||||||+.++|+||++|+|||||+ +|||||++|+++++++ ++|+++|+|.+
T Consensus 147 E~~~l~h~~~G~LsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~~eGmdVv~~I~~~~t~~~~~~P~~~V~I~~ 225 (229)
T 1z81_A 147 ENFDIKHDKEGLLSMANSGPNTNGCQFFITTKKCEWLDGKNVVFGRIIDNDSLLLLKKIENVSVTPYIYKPKIPINVVE 225 (229)
T ss_dssp CCCCSCCCSTTEEEECCSSSSCCCSCEEEESSCCGGGBTTBCEEEEECSHHHHHHHHHHHHSCBCTTTCCBSSCEEEEE
T ss_pred cccccccCCCcEEEeccCCCCCcccEEEEECCCCcccCCCeeEEEEEEecCcHHHHHHHHhCCCCCCCCCCCCCeEEEe
Confidence 999999999999999999999999999999999999999999999999 9999999999999986 89999999974
No 22
>2ok3_A Peptidyl-prolyl CIS-trans isomerase-like 3; beta-barrel, helix, disulfide bridge; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1xyh_A 2oju_A*
Probab=100.00 E-value=2.6e-41 Score=300.85 Aligned_cols=137 Identities=46% Similarity=0.725 Sum_probs=128.5
Q ss_pred ceeeeccccCCcchhhHHHhhcCCCCCccCCceEEeecCCeEEEeCcCCCCCCCCCcccCCCCCCCCCC-CCCCCCCcEE
Q psy443 263 KKIVLRSDVVPKTAENFRALCTGEKGFGFKDSTFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKFEDENF-TLKHTGPGIL 341 (403)
Q Consensus 263 ~~I~L~~d~aP~t~enF~~L~~g~~g~~Y~g~~f~Rvi~~f~iqgGd~~~~~g~gg~~~~g~~~~~e~~-~~~h~~~G~l 341 (403)
..|+|+.+.+|++++||++|| +.|| |+|+.||||+|+||+||||+.+ ++.|+.++||.+|++|.. .++|+++|+|
T Consensus 12 i~ieL~~~~aP~t~~NF~~L~--~~g~-Y~g~~fhRvi~~f~iQgGd~~~-~g~gg~si~g~~~~dE~~~~l~h~~~G~l 87 (161)
T 2ok3_A 12 IKIEVFCERTPKTCENFLALC--ASNY-YNGCIFHRNIKGFMVQTGDPTG-TGRGGNSIWGKKFEDEYSEYLKHNVRGVV 87 (161)
T ss_dssp EEEEECTTTCHHHHHHHHHHH--HTTT-TTTCBCCEEETTTEEEECCTTS-SSSCCCCTTSSCBCCCCCTTCCSCSTTEE
T ss_pred EEEEEcCCCCcHHHHHHHHHh--hhcc-cCCCEEEEEECCCEEecCCCCC-CCCCCCcccCCccccccCcCcCcCCCeEE
Confidence 345999999999999999999 5688 9999999999999999999984 788999999999999985 6899999999
Q ss_pred EEecCCCCCCcceEEEEecCCCCCCCCceEEEEEEecHHHHHHHHhCCCCC--CCccccEEEeC
Q psy443 342 SMANAGPNTNGSQFFITTVKTAWLDNRHVVFGSVVEGLDVVKKLESMGSQS--GKTSKKIVCFN 403 (403)
Q Consensus 342 sma~~g~~s~gSqFfItl~~~~~Ld~~~~vfG~VieG~dvl~~i~~~~t~~--~~P~~~i~I~~ 403 (403)
||||.+|++|+|||||+++++|+||++|+|||+|++|||||++|+++++++ ++|+++|+|.+
T Consensus 88 sma~~gp~s~~SQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~~~~~~~~P~~~v~I~~ 151 (161)
T 2ok3_A 88 SMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKD 151 (161)
T ss_dssp EECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTCCBCTTTCCBSSCCBEEE
T ss_pred EEecCCCCCcceEEEEEcCCCCccCCCEeEEEEEeCCHHHHHHHHhCCccCCCCCcCCCeEEEE
Confidence 999999999999999999999999999999999999999999999999975 79999999863
No 23
>2r99_A Peptidyl-prolyl CIS-trans isomerase E; CIS-trans isomerization, structural genomics consortium, SGC, alternative splicing, mRNA processing; 1.61A {Homo sapiens} SCOP: b.62.1.1 PDB: 3uch_A 1zmf_A
Probab=100.00 E-value=1.4e-40 Score=299.26 Aligned_cols=146 Identities=69% Similarity=1.175 Sum_probs=138.7
Q ss_pred EeeeeEEEEEcCCCChhhHHhHHHhhcCCCCcccCCCEEEeeeCCeEEEeCcCCCCCCCCCcccCCCcccCCCCccCCCc
Q psy443 124 WYRKGFKGRLRSDVVPKTAENFRALCTGEKGFGFKDSTFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTG 203 (403)
Q Consensus 124 T~~G~i~ieL~~d~aP~~~~nF~~L~~g~~g~~Y~~~~f~Rv~~~~~iqgGd~~~~~g~g~~~~~~~~~~~e~~~~~h~~ 203 (403)
|++|+|+||||++.||+||+||++||+|++||+|+++.||||+|+||+||||++.+++.|+.++|+..+++|...++|.+
T Consensus 23 t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~~f~dE~~~l~h~~ 102 (173)
T 2r99_A 23 KPAGRIQMLLRSDVVPMTAENFRCLCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTG 102 (173)
T ss_dssp EEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBEEEEETTTEEEECCTTTSSSSCCCBTTBSCBCCCCCCSCCCS
T ss_pred ccceeEEEEECCCCCcHHHHHHHHHhcccCCceecCCEEEEeeCCCEEEeCCcCCCCCCCCCccCCCcccCcccCcccCC
Confidence 79999999999999999999999999988888899999999999999999999987899999999999999999999999
Q ss_pred cceeeecccCCCCCcceeEEEeccCcCCCCceeEEEeEeecccccccccccCCCCCcccceeeecc
Q psy443 204 PGILSMANAGPNTNGSQFFITTVKTAWLDNRHVVFGSVVEGLDVVKKLESMGSQSGKTSKKIVLRS 269 (403)
Q Consensus 204 ~G~ls~a~~~~~~~~SqFfI~l~~~~~Ld~~~~VFGrVieG~dvl~~i~~~~t~~~~p~~~I~L~~ 269 (403)
+|+||||+++|++++|||||++.++++||++|+|||||++|||||++|+.+++..++|..+|.|..
T Consensus 103 ~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~~~~P~~~v~I~~ 168 (173)
T 2r99_A 103 PGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEAQGSKDGKPKQKVIIAD 168 (173)
T ss_dssp SSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTCCCSSCEEEEE
T ss_pred CcEEEEccCCCCCcccEEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHhCCCCCCCCCCCeEEEE
Confidence 999999999999999999999999999999999999999999999999999887788888876643
No 24
>2cmt_A Peptidyl-prolyl CIS-trans isomerase E; rotamase activity, rotamase, RNA-binding, cyclosporin, cyclophilin, beta-barrel; 1.50A {Schistosoma mansoni} PDB: 2ck1_A
Probab=100.00 E-value=1.7e-40 Score=298.33 Aligned_cols=146 Identities=64% Similarity=1.124 Sum_probs=138.3
Q ss_pred EeeeeEEEEEcCCCChhhHHhHHHhhcCCCCcccCCCEEEeeeCCeEEEeCcCCCCCCCCCcccCCCcccCCCCccCCCc
Q psy443 124 WYRKGFKGRLRSDVVPKTAENFRALCTGEKGFGFKDSTFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTG 203 (403)
Q Consensus 124 T~~G~i~ieL~~d~aP~~~~nF~~L~~g~~g~~Y~~~~f~Rv~~~~~iqgGd~~~~~g~g~~~~~~~~~~~e~~~~~h~~ 203 (403)
|+.|+|+||||++.||+||+||++||++++||+|+++.||||+|+||+||||++.+++.|+.++|+..+++|...++|.+
T Consensus 22 t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~G~gg~si~g~~f~dE~~~l~h~~ 101 (172)
T 2cmt_A 22 GDAGRIVMELRSDIVPRTAENFRALCTGERGFGYHNCCFHRVIPQFMCQGGDFVKGDGTGGKSIYGRKFDDENFQLRHEG 101 (172)
T ss_dssp EEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBEEEEETTTEEEECCTTTSSSSCCCBTTBSCBCCCCCCSCCCS
T ss_pred eecceEEEEEcCCCCCHHHHHHHHHhccCCCceECCCEEEEEECCCEEEcCCccCCCCCCCCccCCCcccccccCcccCC
Confidence 79999999999999999999999999887888899999999999999999999887899999999999999999999999
Q ss_pred cceeeecccCCCCCcceeEEEeccCcCCCCceeEEEeEeecccccccccccCCCCCcccceeeecc
Q psy443 204 PGILSMANAGPNTNGSQFFITTVKTAWLDNRHVVFGSVVEGLDVVKKLESMGSQSGKTSKKIVLRS 269 (403)
Q Consensus 204 ~G~ls~a~~~~~~~~SqFfI~l~~~~~Ld~~~~VFGrVieG~dvl~~i~~~~t~~~~p~~~I~L~~ 269 (403)
+|+||||+++|++++|||||++.++|+||++|+|||+|++|||||++|+.+++..++|..+|.|..
T Consensus 102 ~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tvFG~Vv~G~dvv~~I~~~~~~~~~P~~~v~I~~ 167 (172)
T 2cmt_A 102 FGVLSMANSGPNTNGSQFFICTTKCDWLDGKHVVFGRVVDGQNVVKKMESVGSKSGKVKEPVIISR 167 (172)
T ss_dssp TTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHGGGGCCTTCCCSSCEEEEE
T ss_pred ceEEEEeeCCCCCcccEEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHhCCCCCCCCCCCEEEEE
Confidence 999999999999999999999999999999999999999999999999999888888888876643
No 25
>2ose_A Probable peptidyl-prolyl CIS-trans isomerase; cyclophilin; 2.04A {Mimivirus}
Probab=100.00 E-value=5.6e-41 Score=314.82 Aligned_cols=161 Identities=27% Similarity=0.421 Sum_probs=136.3
Q ss_pred cCcCCCCceeEEEeEeecccccccccccCCCCCccccee--eeccccCCcchhhHHHhhcCC-----------C----C-
Q psy443 227 KTAWLDNRHVVFGSVVEGLDVVKKLESMGSQSGKTSKKI--VLRSDVVPKTAENFRALCTGE-----------K----G- 288 (403)
Q Consensus 227 ~~~~Ld~~~~VFGrVieG~dvl~~i~~~~t~~~~p~~~I--~L~~d~aP~t~enF~~L~~g~-----------~----g- 288 (403)
+.|.......|| |++ ...+.+.++| +|+.+.+|+|++||+.||+|+ . |
T Consensus 7 ~~p~~~~~p~v~------~di--------~i~~t~~G~I~ieL~~d~aP~tv~NF~~L~~g~~~~~~p~~~~~~~~~~G~ 72 (234)
T 2ose_A 7 DLPNSGKNPRVY------MDI--------VLNNEIIGRLQIKLFRDAFPAGVENFVQLTNGKTYRVNSNGTGKYKYNRHI 72 (234)
T ss_dssp SCCCCCSSCEEE------EEE--------EETTEEEEEEEEEECGGGCHHHHHHHHHHHHTCCCC---------------
T ss_pred ccCcCCCCCEEE------EEE--------EECCcccceEEEEEcCCCCcHHHHHHHHHhcCCccccccccccccccccCC
Confidence 334444455677 665 3334556665 999999999999999999876 4 5
Q ss_pred -CccCCceEEeecCCeEEEeCcCCCCCCCCCcccCCCC-----CCCCCCCCCCCCCcEEEEec----CCCCCCcceEEEE
Q psy443 289 -FGFKDSTFHRVIPNFMCQGGDFTNHNGTGGKSIYGNK-----FEDENFTLKHTGPGILSMAN----AGPNTNGSQFFIT 358 (403)
Q Consensus 289 -~~Y~g~~f~Rvi~~f~iqgGd~~~~~g~gg~~~~g~~-----~~~e~~~~~h~~~G~lsma~----~g~~s~gSqFfIt 358 (403)
|+|+|+.||||+|+|||||||+..++|.||.++||.. |+ ++.++|+++|+||||| .+|++|+|||||+
T Consensus 73 ~~~Y~gt~FHRVi~~FmiQgGd~~~g~G~Gg~siyg~~~~p~~f~--~~~l~h~~~G~lsMAn~~~~~gpntngSQFFIt 150 (234)
T 2ose_A 73 NRTYEGCKFHNVLHNNYIVSGDIYNSNGSSAGTVYCDEPIPPVFG--DYFYPHESKGLLSLVPYTDESGNRYYDSTFMIT 150 (234)
T ss_dssp CCCSTTCBCCEEETTTEEEECCCC----CCCCCTTTTCCBCCCCC--SCCCCSCSTTEEEECCEECTTSCEEBCSCEEEE
T ss_pred ceEECCcEEEEEECCCEEEcCCccCCCCCCCccccCCccCccccc--CcCccCCCCCEEEEecccccCCCCCccceEEEE
Confidence 7799999999999999999998777899999999987 76 5689999999999999 9999999999999
Q ss_pred ecC------CCCCCCCceEEEEEEecHHHHHHHHhCCCCC-CCccccEEEeC
Q psy443 359 TVK------TAWLDNRHVVFGSVVEGLDVVKKLESMGSQS-GKTSKKIVCFN 403 (403)
Q Consensus 359 l~~------~~~Ld~~~~vfG~VieG~dvl~~i~~~~t~~-~~P~~~i~I~~ 403 (403)
+.+ +||||++|+|||+|++|||||++|+++++++ ++|+++|+|.+
T Consensus 151 ~~~~~~~~g~p~LDg~~tVFG~Vv~GmdVv~~I~~~~t~~~~~P~~~V~I~~ 202 (234)
T 2ose_A 151 LDDIRPSNVLDELDRDQVVIGQVYGGLDVLDKINSMIKPYAGRKYPTFSIGK 202 (234)
T ss_dssp SSCCCTTSSGGGSCTTSEEEEEEEECHHHHHHHHHHTCCCTTCCCCCEEEEE
T ss_pred ecCccccCCCcccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCCccCCEEEEE
Confidence 999 9999999999999999999999999999987 89999999974
No 26
>2poe_A Cyclophilin-like protein, putative; cryptosporidium parvum cyclophilin isomerase, structural genomics; 2.01A {Cryptosporidium parvum iowa II} PDB: 2qer_A
Probab=100.00 E-value=8.2e-41 Score=303.55 Aligned_cols=137 Identities=43% Similarity=0.701 Sum_probs=129.0
Q ss_pred ceeeeccccCCcchhhHHHhhcCCCCCccCCceEEeecCCeEEEeCcCCCCCCCCCcccCCCCCCCCC-CCCCCCCCcEE
Q psy443 263 KKIVLRSDVVPKTAENFRALCTGEKGFGFKDSTFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKFEDEN-FTLKHTGPGIL 341 (403)
Q Consensus 263 ~~I~L~~d~aP~t~enF~~L~~g~~g~~Y~g~~f~Rvi~~f~iqgGd~~~~~g~gg~~~~g~~~~~e~-~~~~h~~~G~l 341 (403)
..|+|+.+.+|++++||++|| +.|| |+|+.||||+|+|||||||+++ ++.||.++||.+|++|. ..++|+++|+|
T Consensus 28 i~ieL~~~~aP~t~~NF~~L~--~~g~-Y~g~~FhRvi~~f~iQgGd~~~-~g~gg~si~g~~~~dE~~~~l~h~~~G~l 103 (185)
T 2poe_A 28 LKFELFCSQCPKACKNFLALS--ASGY-YKNTIFHKNIKGFIIQGGDPTG-TGKGGESIYGRYFDDEIYPELKYDRRGIL 103 (185)
T ss_dssp EEEEECTTTCHHHHHHHHHHH--HTTT-TTTEEEEEECTTSEEEEEETTS-SSSCCCBTTBSCBCCCCCTTSCCCSTTEE
T ss_pred EEEEEeCCCCcHHHHHHHHHh--ccCC-CCCCEEEEEECCCEEEcCCCCC-CCCCCCccCCCcccccccCCCccCCCeEE
Confidence 344999999999999999999 6788 9999999999999999999984 78899999999999998 68999999999
Q ss_pred EEecCC----CCCCcceEEEEecCCCCCCCCceEEEEEEecHHHHHHHHhCCCCC-CCccccEEEeC
Q psy443 342 SMANAG----PNTNGSQFFITTVKTAWLDNRHVVFGSVVEGLDVVKKLESMGSQS-GKTSKKIVCFN 403 (403)
Q Consensus 342 sma~~g----~~s~gSqFfItl~~~~~Ld~~~~vfG~VieG~dvl~~i~~~~t~~-~~P~~~i~I~~ 403 (403)
||||.+ |++|+|||||+++++|+||++|+|||+|++|||||++|++++++. ++|+++|+|.+
T Consensus 104 smA~~g~~~~p~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P~~~v~I~~ 170 (185)
T 2poe_A 104 SMASKGASKKPNTNGSQFFITYSSLPQLNGEYVIFGKLIDGFETLNTLENCPSDKSHKPIDEIIIKD 170 (185)
T ss_dssp EECCSCC-CCCSCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHSCBCTTSCBSSCCEEEE
T ss_pred EEecCCCCCCCCCccceEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCCcCCCeEEEE
Confidence 999999 999999999999999999999999999999999999999999875 89999999963
No 27
>2z6w_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin D; HET: BMT MLE CIT; 0.96A {Homo sapiens} SCOP: b.62.1.1 PDB: 3rcg_A* 3r49_A* 3r54_A 3r56_A* 3r57_A* 3r59_A* 3rcf_A* 3r4g_A* 3rci_X* 3rck_X* 3rcl_A* 3rd9_X* 3rda_X* 3rdb_A* 3rdc_A* 2bit_X 2biu_X 3qyu_A 3k0m_A 1ak4_A* ...
Probab=100.00 E-value=1.7e-40 Score=296.71 Aligned_cols=146 Identities=76% Similarity=1.232 Sum_probs=138.1
Q ss_pred EeeeeEEEEEcCCCChhhHHhHHHhhcCCCCcccCCCEEEeeeCCeEEEeCcCCCCCCCCCcccCCCcccCCCCccCCCc
Q psy443 124 WYRKGFKGRLRSDVVPKTAENFRALCTGEKGFGFKDSTFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTG 203 (403)
Q Consensus 124 T~~G~i~ieL~~d~aP~~~~nF~~L~~g~~g~~Y~~~~f~Rv~~~~~iqgGd~~~~~g~g~~~~~~~~~~~e~~~~~h~~ 203 (403)
|++|+|+||||++.||+||+||++||+|++||+|+++.||||+|+||+||||++.+++.|+.++++..+++|...++|.+
T Consensus 15 t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~fhRvi~~f~iQgGd~~~~~g~gg~si~g~~f~dE~~~l~h~~ 94 (165)
T 2z6w_A 15 KPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGSRFPDENFTLKHVG 94 (165)
T ss_dssp EEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBEEEEETTTEEEECCTTTSSSSCCCBTTBSCBCCCCCCSCCCS
T ss_pred EeeeEEEEEEeCCCCcHHHHHHHHHhccCCCccCcCCEEEEEECCCEEEeCCccCCCCCCCCcccCCcccCcccccccCC
Confidence 58999999999999999999999999888999899999999999999999999887899999999999999998999999
Q ss_pred cceeeecccCCCCCcceeEEEeccCcCCCCceeEEEeEeecccccccccccCCCCCcccceeeecc
Q psy443 204 PGILSMANAGPNTNGSQFFITTVKTAWLDNRHVVFGSVVEGLDVVKKLESMGSQSGKTSKKIVLRS 269 (403)
Q Consensus 204 ~G~ls~a~~~~~~~~SqFfI~l~~~~~Ld~~~~VFGrVieG~dvl~~i~~~~t~~~~p~~~I~L~~ 269 (403)
+|+||||+++|++++|||||++.++|+||++|+|||||++|||||++|++.++..++|..+|.|..
T Consensus 95 ~G~lsmA~~gp~s~~SQFfI~~~~~~~Ldg~~~vFG~Vv~G~dvv~~I~~~~~~~~~P~~~v~I~~ 160 (165)
T 2z6w_A 95 PGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIEGMDVVKKIESFGSKSGRTSKKIVITD 160 (165)
T ss_dssp TTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHTCCTTSCCSSCEEEEE
T ss_pred CCEEEEeeCCCCCcccEEEEEcCCCcccCCCeeEEEEEEcCHHHHHHHHhCCCCCCCCCCcEEEEE
Confidence 999999999999999999999999999999999999999999999999999887788888876643
No 28
>1zkc_A Peptidyl-prolyl CIS-trans isomerase like 2; CIS-trans isomerization, peptidylprolyl isomerase, protein- folding, structural genomics consortium; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=1.2e-40 Score=304.64 Aligned_cols=137 Identities=48% Similarity=0.807 Sum_probs=129.1
Q ss_pred ceeeeccccCCcchhhHHHhhcCCCCCccCCceEEeecCCeEEEeCcCCCCCCCCCcccCCCCCCCCC-CCCCCCCCcEE
Q psy443 263 KKIVLRSDVVPKTAENFRALCTGEKGFGFKDSTFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKFEDEN-FTLKHTGPGIL 341 (403)
Q Consensus 263 ~~I~L~~d~aP~t~enF~~L~~g~~g~~Y~g~~f~Rvi~~f~iqgGd~~~~~g~gg~~~~g~~~~~e~-~~~~h~~~G~l 341 (403)
..|+|+.+.+|++++||+.|| +.|| |+|+.||||+|+|||||||+++ +|.|+.++||.+|++|. ..++|+++|+|
T Consensus 31 I~ieL~~~~aP~tv~NF~~L~--~~g~-Ydg~~FhRVi~~f~iQgGd~~~-~g~Gg~si~g~~f~dE~~~~l~h~~~G~l 106 (197)
T 1zkc_A 31 LNLELHCDLTPKTCENFIRLC--KKHY-YDGTIFHRSIRNFVIQGGDPTG-TGTGGESYWGKPFKDEFRPNLSHTGRGIL 106 (197)
T ss_dssp EEEEECTTTSHHHHHHHHHHH--HTTT-TTTEEEEEEETTTEEEECCTTS-SSSCCCBTTBSCBCCCCCTTCCSCSTTEE
T ss_pred EEEEEcCCCCcHHHHHHHHHH--hcCC-CCCCEEEEEeCCCEEEcCCCCC-CCCCCCccCCCccccccCcCcCCCCceEE
Confidence 345999999999999999999 6789 9999999999999999999985 78899999999999994 78899999999
Q ss_pred EEecCCCCCCcceEEEEecCCCCCCCCceEEEEEEecHHHHHHHHhCCCCC--CCccccEEEeC
Q psy443 342 SMANAGPNTNGSQFFITTVKTAWLDNRHVVFGSVVEGLDVVKKLESMGSQS--GKTSKKIVCFN 403 (403)
Q Consensus 342 sma~~g~~s~gSqFfItl~~~~~Ld~~~~vfG~VieG~dvl~~i~~~~t~~--~~P~~~i~I~~ 403 (403)
||||.+|++|+|||||+++++|+||++|+|||+|++|||||++|+++++++ ++|+++|+|.+
T Consensus 107 sMAn~gp~sngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~~P~~~i~I~~ 170 (197)
T 1zkc_A 107 SMANSGPNSNRSQFFITFRSCAYLDKKHTIFGRVVGGFDVLTAMENVESDPKTDRPKEEIRIDA 170 (197)
T ss_dssp EECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHSCBCTTTCCBSSCCEEEE
T ss_pred EEecCCCCCcccEEEEEcCCCCccCCCccEEEEEEcCHHHHHHHHcCCCCCCCCCcCCCeEEEE
Confidence 999999999999999999999999999999999999999999999999976 89999999963
No 29
>2ok3_A Peptidyl-prolyl CIS-trans isomerase-like 3; beta-barrel, helix, disulfide bridge; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1xyh_A 2oju_A*
Probab=100.00 E-value=1.4e-40 Score=296.26 Aligned_cols=146 Identities=43% Similarity=0.689 Sum_probs=136.1
Q ss_pred eeeEEEEeeeeEEEEEcCCCChhhHHhHHHhhcCCCCcccCCCEEEeeeCCeEEEeCcCCCCCCCCCcccCCCcccCCCC
Q psy443 118 LANAIHWYRKGFKGRLRSDVVPKTAENFRALCTGEKGFGFKDSTFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKFEDENF 197 (403)
Q Consensus 118 ~~v~~~T~~G~i~ieL~~d~aP~~~~nF~~L~~g~~g~~Y~~~~f~Rv~~~~~iqgGd~~~~~g~g~~~~~~~~~~~e~~ 197 (403)
|.|+|+|++|+|+||||++.||+||+||++|| +.|| |+++.||||+|+||+||||+.+ ++.|+.++|+..+++|..
T Consensus 1 m~v~~~T~~G~i~ieL~~~~aP~t~~NF~~L~--~~g~-Y~g~~fhRvi~~f~iQgGd~~~-~g~gg~si~g~~~~dE~~ 76 (161)
T 2ok3_A 1 MSVTLHTDVGDIKIEVFCERTPKTCENFLALC--ASNY-YNGCIFHRNIKGFMVQTGDPTG-TGRGGNSIWGKKFEDEYS 76 (161)
T ss_dssp CEEEEEETTEEEEEEECTTTCHHHHHHHHHHH--HTTT-TTTCBCCEEETTTEEEECCTTS-SSSCCCCTTSSCBCCCCC
T ss_pred CEEEEEeCCccEEEEEcCCCCcHHHHHHHHHh--hhcc-cCCCEEEEEECCCEEecCCCCC-CCCCCCcccCCccccccC
Confidence 67999999999999999999999999999999 7788 9999999999999999999985 888999999999999975
Q ss_pred -ccCCCccceeeecccCCCCCcceeEEEeccCcCCCCceeEEEeEeecccccccccccCCCC--Ccccceeee
Q psy443 198 -TLKHTGPGILSMANAGPNTNGSQFFITTVKTAWLDNRHVVFGSVVEGLDVVKKLESMGSQS--GKTSKKIVL 267 (403)
Q Consensus 198 -~~~h~~~G~ls~a~~~~~~~~SqFfI~l~~~~~Ld~~~~VFGrVieG~dvl~~i~~~~t~~--~~p~~~I~L 267 (403)
.++|+++|+||||+++|++++|||||++.++++||++|+|||||++||+||++|+++++.. ++|..+|.|
T Consensus 77 ~~l~h~~~G~lsma~~gp~s~~SQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~~~~~~~~P~~~v~I 149 (161)
T 2ok3_A 77 EYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHI 149 (161)
T ss_dssp TTCCSCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTCCBCTTTCCBSSCCBE
T ss_pred cCcCcCCCeEEEEecCCCCCcceEEEEEcCCCCccCCCEeEEEEEeCCHHHHHHHHhCCccCCCCCcCCCeEE
Confidence 6889899999999999999999999999999999999999999999999999999988654 677776644
No 30
>2b71_A Cyclophilin-like protein; structural genomics, structural genomics consortium, SGC, isomerase; 2.50A {Plasmodium yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=1.1e-40 Score=304.76 Aligned_cols=137 Identities=47% Similarity=0.770 Sum_probs=128.7
Q ss_pred ceeeeccccCCcchhhHHHhhcCCCCCccCCceEEeecCCeEEEeCcCCCCCCCCCcccCCCCCCCCC-CCCCCCCCcEE
Q psy443 263 KKIVLRSDVVPKTAENFRALCTGEKGFGFKDSTFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKFEDEN-FTLKHTGPGIL 341 (403)
Q Consensus 263 ~~I~L~~d~aP~t~enF~~L~~g~~g~~Y~g~~f~Rvi~~f~iqgGd~~~~~g~gg~~~~g~~~~~e~-~~~~h~~~G~l 341 (403)
..|+|+.+.+|++++||+.|| +.|| |+|+.||||+|+|||||||+++ +|.||.++||.+|++|. ..++|+++|+|
T Consensus 50 I~ieL~~~~aP~tv~NF~~L~--~~g~-Y~g~~FhRVi~~f~iQgGd~~~-~g~gg~si~g~~~~dE~~~~l~h~~~G~l 125 (196)
T 2b71_A 50 FEVELYWYHSPKTCLNFYTLC--EMGF-YDNTIFHRVIPNFVIQGGDPTG-TGKGGKSIYGEYFEDEINKELKHTGAGIL 125 (196)
T ss_dssp EEEEECTTTSHHHHHHHHHHH--HTTT-TTTEEEEEEETTTEEEEEETTS-SSSCCCBTTBSCBCCCCCTTCCCCSTTEE
T ss_pred EEEEEeCCCCcHHHHHHHHHh--hcCC-cCCCEEEEEeCCcEEEcCCCCC-CCCCCCccCCCcccccccCCcCcCCCeEE
Confidence 345999999999999999999 6788 9999999999999999999985 78899999999999995 57899999999
Q ss_pred EEecCCCCCCcceEEEEecCCCCCCCCceEEEEEEecHHHHHHHHhCCCCC-CCccccEEEeC
Q psy443 342 SMANAGPNTNGSQFFITTVKTAWLDNRHVVFGSVVEGLDVVKKLESMGSQS-GKTSKKIVCFN 403 (403)
Q Consensus 342 sma~~g~~s~gSqFfItl~~~~~Ld~~~~vfG~VieG~dvl~~i~~~~t~~-~~P~~~i~I~~ 403 (403)
||||.+|++|+|||||+++++|+||++|+|||||++|||||++|++++++. ++|+++|+|.+
T Consensus 126 sMAn~gpns~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P~~~i~I~~ 188 (196)
T 2b71_A 126 SMSNNGPNTNSSQFFITLAPLPHLDGKHTIFARVSKNMTCIENIASVQTTATNKPIFDLKILR 188 (196)
T ss_dssp EECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTCCBSSCCEEEE
T ss_pred EEccCCCCCcccEEEEECCCCCccCCCEeEEEEEecCHHHHHHHHhCCcCCCCCCCCCeEEEE
Confidence 999999999999999999999999999999999999999999999999975 89999999963
No 31
>2fu0_A Cyclophilin, putative; PFE0505W, cyclosporin-binding domain, structura genomics, structural genomics consortium, SGC, unknown FUNC; 1.80A {Plasmodium falciparum} SCOP: b.62.1.1
Probab=100.00 E-value=1.5e-40 Score=295.42 Aligned_cols=148 Identities=43% Similarity=0.691 Sum_probs=138.0
Q ss_pred eeeEEEEeeeeEEEEEcCCCChhhHHhHHHhhcCCCCcccCCCEEEeeeCCeEEEeCcCCCCCCCCCcccCCCcccCCCC
Q psy443 118 LANAIHWYRKGFKGRLRSDVVPKTAENFRALCTGEKGFGFKDSTFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKFEDENF 197 (403)
Q Consensus 118 ~~v~~~T~~G~i~ieL~~d~aP~~~~nF~~L~~g~~g~~Y~~~~f~Rv~~~~~iqgGd~~~~~g~g~~~~~~~~~~~e~~ 197 (403)
..|+++|++|+|+||||++.||+||+||++|| +.|| |+++.||||+|+||+||||+.. ++.|+.++|+..+++|..
T Consensus 6 ~~v~~~T~~G~i~ieL~~~~aP~t~~NF~~L~--~~g~-Y~g~~fhRvi~~f~iQgGd~~~-~g~gg~si~g~~~~dE~~ 81 (160)
T 2fu0_A 6 KSAIIYTTMGDIHISLFYKECKKTVQNFSVHS--INGY-YNNCIFHRVIKHFMVQTGDPSG-DGTGGESIWGNEFEDEFF 81 (160)
T ss_dssp CEEEEEETTEEEEEEECTTTCHHHHHHHHHHH--HTTT-TTTCBCCEEETTTEEEECCTTS-SSSCCCCTTSSCBCCCCB
T ss_pred CEEEEEecCccEEEEEeCCCChHHHHHHHHHh--ccCc-cCCCEEEEEECCCEEEeCCcCC-CCCCCCcccCCCcccccc
Confidence 67999999999999999999999999999999 7889 9999999999999999999976 789999999999999987
Q ss_pred -ccCCCccceeeecccCCCCCcceeEEEeccCcCCCCceeEEEeEeecccccccccccCCC-CCcccceeeecc
Q psy443 198 -TLKHTGPGILSMANAGPNTNGSQFFITTVKTAWLDNRHVVFGSVVEGLDVVKKLESMGSQ-SGKTSKKIVLRS 269 (403)
Q Consensus 198 -~~~h~~~G~ls~a~~~~~~~~SqFfI~l~~~~~Ld~~~~VFGrVieG~dvl~~i~~~~t~-~~~p~~~I~L~~ 269 (403)
.++|.++|+||||+++|++++|||||++.++|+||++|+|||||++|||||++|+++++. .++|..+|.|..
T Consensus 82 ~~l~h~~~G~lsmA~~gp~s~~SQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~t~~~~~P~~~v~I~~ 155 (160)
T 2fu0_A 82 DHLNHSKPFMVSMANCGPNTNGSQFFITTVPCPWLDFKHTVFGKVTQGSKIVLDIEKVRTDKRDKPLEDIKILN 155 (160)
T ss_dssp TTBCSSSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSSCCBEEE
T ss_pred CCcccCCceEEEEecCCCCCcccEEEEECCCCCccCCCcEEEEEEEcCHHHHHHHHhCCcCCCCCcCCCeEEEE
Confidence 689998999999999999999999999999999999999999999999999999998865 578887775543
No 32
>3pmp_A Cyclophilin A; peptidyl prolyl isomerase, isomerase-immunosuppressant compl; HET: BMT; 1.47A {Moniliophthora perniciosa} SCOP: b.62.1.1 PDB: 3o7t_A
Probab=100.00 E-value=4.5e-40 Score=293.88 Aligned_cols=146 Identities=66% Similarity=1.073 Sum_probs=139.0
Q ss_pred EeeeeEEEEEcCCCChhhHHhHHHhhcCCCCcccCCCEEEeeeCCeEEEeCcCCCCCCCCCcccCCCcccCCCCccCCCc
Q psy443 124 WYRKGFKGRLRSDVVPKTAENFRALCTGEKGFGFKDSTFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTG 203 (403)
Q Consensus 124 T~~G~i~ieL~~d~aP~~~~nF~~L~~g~~g~~Y~~~~f~Rv~~~~~iqgGd~~~~~g~g~~~~~~~~~~~e~~~~~h~~ 203 (403)
|++|+|+||||++.||+||+||++||+|++||+|+++.||||+|+||+||||+..+++.|+.++++..+++|...++|.+
T Consensus 14 t~~G~i~ieL~~~~aP~t~~nF~~L~~g~~g~~Y~g~~fhRvi~~f~iQgGd~~~~~g~gg~si~g~~~~dE~~~l~h~~ 93 (164)
T 3pmp_A 14 KPEGRIVFKLYDEAVPKTAKNFRELATGQHGFGYKDSIFHRVIPQFMLQGGDFTRHNGTGGKSIYGEKFADENFQVKHTK 93 (164)
T ss_dssp EEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBEEEEETTTEEEECCTTTSSSSCCCBTTBSCBCCCCCCSCCCS
T ss_pred EEeeEEEEEEeCCCCcHHHHHHHHHhcccCCCcccCCEEEEEECCCeEEeCCCCCCCCCCCcccCCccccccccccCcCC
Confidence 79999999999999999999999999888999899999999999999999998777999999999999999999999999
Q ss_pred cceeeecccCCCCCcceeEEEeccCcCCCCceeEEEeEeecccccccccccCCCCCcccceeeecc
Q psy443 204 PGILSMANAGPNTNGSQFFITTVKTAWLDNRHVVFGSVVEGLDVVKKLESMGSQSGKTSKKIVLRS 269 (403)
Q Consensus 204 ~G~ls~a~~~~~~~~SqFfI~l~~~~~Ld~~~~VFGrVieG~dvl~~i~~~~t~~~~p~~~I~L~~ 269 (403)
+|+||||+++|++++|||||++.++|+||++|+|||||++||+||++|+++++..++|..+|.|..
T Consensus 94 ~G~lsma~~g~~t~~SQFfIt~~~~~~Ld~~~~vFG~Vv~G~~vv~~I~~~~~~~~~P~~~v~I~~ 159 (164)
T 3pmp_A 94 PGLLSMANAGANTNGSQFFITTVPTSWLDGKHVVFGEVIEGLDIVRKVEGKGSASGKTNATIKITD 159 (164)
T ss_dssp TTEEEECBSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTCCCSSCEEEEE
T ss_pred CcEEEEeeCCCCCcccEEEEECCCChhhCCCccEEEEEeCCHHHHHHHHhCCCCCCCcccCEEEEe
Confidence 999999999999999999999999999999999999999999999999999988888888876644
No 33
>2x7k_A Peptidyl-prolyl CIS-trans isomerase-like 1; isomerase-immunosuppressant complex, immunosuppressant; HET: MLE MVA BMT ABA SAR; 1.15A {Homo sapiens} PDB: 1xwn_A
Probab=100.00 E-value=2.8e-40 Score=295.41 Aligned_cols=148 Identities=42% Similarity=0.721 Sum_probs=137.9
Q ss_pred eeeEEEEeeeeEEEEEcCCCChhhHHhHHHhhcCCCCcccCCCEEEeeeCCeEEEeCcCCCCCCCCCcccCCCcccCCC-
Q psy443 118 LANAIHWYRKGFKGRLRSDVVPKTAENFRALCTGEKGFGFKDSTFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKFEDEN- 196 (403)
Q Consensus 118 ~~v~~~T~~G~i~ieL~~d~aP~~~~nF~~L~~g~~g~~Y~~~~f~Rv~~~~~iqgGd~~~~~g~g~~~~~~~~~~~e~- 196 (403)
+.|.|+|++|+|+||||++.||+||+||++|| +.|| |+++.||||+|+||+||||++. ++.|+.++|+..+++|.
T Consensus 12 ~~v~l~t~~G~i~ieL~~~~aP~t~~NF~~L~--~~g~-Y~g~~fhRvi~~f~iQgGd~~~-~g~gg~si~g~~~~dE~~ 87 (166)
T 2x7k_A 12 PNVYLETSMGIIVLELYWKHAPKTCKNFAELA--RRGY-YNGTKFHRIIKDFMIQGGDPTG-TGRGGASIYGKQFEDELH 87 (166)
T ss_dssp SEEEEEETTEEEEEEECTTTCHHHHHHHHHHH--HHTT-TTTEECCEEETTTEEEECCTTS-SSSCCCCTTSSCBCCCCC
T ss_pred CEEEEEeCCCcEEEEEccCCCCHHHHHHHHHH--hcCC-CCCCEEEEEECCCEEEcCCCCC-CCCCCCccCCCccccccc
Confidence 78999999999999999999999999999999 7889 9999999999999999999986 88999999999999998
Q ss_pred CccCCCccceeeecccCCCCCcceeEEEeccCcCCCCceeEEEeEeecccccccccccCCCC-Ccccceeeecc
Q psy443 197 FTLKHTGPGILSMANAGPNTNGSQFFITTVKTAWLDNRHVVFGSVVEGLDVVKKLESMGSQS-GKTSKKIVLRS 269 (403)
Q Consensus 197 ~~~~h~~~G~ls~a~~~~~~~~SqFfI~l~~~~~Ld~~~~VFGrVieG~dvl~~i~~~~t~~-~~p~~~I~L~~ 269 (403)
..++|.++|+||||+++|++++|||||++.++|+||++|+|||||++|||||++|+.+++.. ++|..+|.|..
T Consensus 88 ~~l~h~~~G~lsmAn~gp~s~gSQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~t~~~~~P~~~i~I~~ 161 (166)
T 2x7k_A 88 PDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQDRPVDDVKIIK 161 (166)
T ss_dssp TTSCCCSTTEEEECBSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHTTSCBCTTSCBSSCCEEEE
T ss_pred cccCCCCCeEEEEeeCCCCCccceEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHcCCcCCCCCcCCCeEEEE
Confidence 47899889999999999999999999999999999999999999999999999999998654 67877775543
No 34
>2haq_A Cyclophilin; rotamase, proline, isomerase, CIS-trans, protozoa, KAla-AZAR.; 1.97A {Leishmania donovani} PDB: 3eov_A* 3bt8_A
Probab=100.00 E-value=4e-40 Score=295.57 Aligned_cols=144 Identities=60% Similarity=0.956 Sum_probs=135.5
Q ss_pred EeeeeEEEEEcCCCChhhHHhHHHhhcCCCCcccCCCEEEeeeCCeEEEeCcCCCCCCCCCcccCCCcccCCCCccCCCc
Q psy443 124 WYRKGFKGRLRSDVVPKTAENFRALCTGEKGFGFKDSTFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTG 203 (403)
Q Consensus 124 T~~G~i~ieL~~d~aP~~~~nF~~L~~g~~g~~Y~~~~f~Rv~~~~~iqgGd~~~~~g~g~~~~~~~~~~~e~~~~~h~~ 203 (403)
|++|+|+||||++.||+||+||++||+|++||+|+++.||||+|+||+||||+..+++.|+.++|+..+++|+..++|.
T Consensus 23 t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~~f~dE~~~l~h~- 101 (172)
T 2haq_A 23 EPLGRITIGLFGKDAPLTTENFRQLCTGEHGFGYKDSIFHRVIQNFMIQGGDFTNFDGTGGKSIYGEKFADENLNVKHF- 101 (172)
T ss_dssp EEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBCCEEETTTEEEECCTTTSSSSCCCCSSSSCBCCCCCCSCCC-
T ss_pred EecceEEEEEeCCCCcHHHHHHHHHhccCCCcccCCCEEEEEECCCEEecCCccCCCCCCCccccCCcccCcCCCcccC-
Confidence 6999999999999999999999999999999989999999999999999999777789999999999999998899999
Q ss_pred cceeeecccCCCCCcceeEEEeccCcCCCCceeEEEeEeecccccccccccCCCC-Ccccceeeec
Q psy443 204 PGILSMANAGPNTNGSQFFITTVKTAWLDNRHVVFGSVVEGLDVVKKLESMGSQS-GKTSKKIVLR 268 (403)
Q Consensus 204 ~G~ls~a~~~~~~~~SqFfI~l~~~~~Ld~~~~VFGrVieG~dvl~~i~~~~t~~-~~p~~~I~L~ 268 (403)
+|+||||+++|++++|||||++.++|+||++|+|||||++||+||++|+++++.. ++|..+|.|.
T Consensus 102 ~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~vFG~Vv~G~dvv~~I~~~~t~~~~~P~~~v~I~ 167 (172)
T 2haq_A 102 VGALSMANAGPNTNGSQFFITTAPTPWLDGRHVVFGKVLDGMDVVLRIEKTKTNSHDRPVKPVKIV 167 (172)
T ss_dssp TTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCGGGCBSSCEEEE
T ss_pred ceEEEEccCCCCCcccEEEEECCCCCccCCCEeEEEEEeCCHHHHHHHHhCCcCCCCcCCCCeEEE
Confidence 9999999999999999999999999999999999999999999999999998754 4888877654
No 35
>2igv_A Peptidyl-prolyl CIS-trans isomerase 3; rotamase; 1.67A {Caenorhabditis elegans} SCOP: b.62.1.1 PDB: 1e3b_A 1e8k_A 1dyw_A 2igw_A 2hqj_A
Probab=100.00 E-value=4.8e-40 Score=295.93 Aligned_cols=146 Identities=70% Similarity=1.081 Sum_probs=136.5
Q ss_pred EeeeeEEEEEcCCCChhhHHhHHHhhcCCCCc-------ccCCCEEEeeeCCeEEEeCcCCCCCCCCCcccCCCcccCCC
Q psy443 124 WYRKGFKGRLRSDVVPKTAENFRALCTGEKGF-------GFKDSTFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKFEDEN 196 (403)
Q Consensus 124 T~~G~i~ieL~~d~aP~~~~nF~~L~~g~~g~-------~Y~~~~f~Rv~~~~~iqgGd~~~~~g~g~~~~~~~~~~~e~ 196 (403)
|++|+|+||||++.||+||+||++||++++|+ +|+++.||||+|+||+||||++.+++.|+.++|+..+++|.
T Consensus 15 ~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G~gg~siyg~~f~dE~ 94 (173)
T 2igv_A 15 KASGRIVMELYDDVVPKTAGNFRALCTGENGIGKSGKPLHFKGSKFHRIIPNFMIQGGDFTRGNGTGGESIYGEKFPDEN 94 (173)
T ss_dssp EEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETTTEEEECCTTTSSSSCCCBTTBSCBCCCC
T ss_pred EecceEEEEEeCCCCcHHHHHHHHHhcCCCCCCccCccceECCCEEEEEECCCEEEcCCCCCCCCCCCCccCCCcccCcc
Confidence 46999999999999999999999999887773 29999999999999999999987789999999999999999
Q ss_pred CccCCCccceeeecccCCCCCcceeEEEeccCcCCCCceeEEEeEeecccccccccccCCCCCcccceeeecc
Q psy443 197 FTLKHTGPGILSMANAGPNTNGSQFFITTVKTAWLDNRHVVFGSVVEGLDVVKKLESMGSQSGKTSKKIVLRS 269 (403)
Q Consensus 197 ~~~~h~~~G~ls~a~~~~~~~~SqFfI~l~~~~~Ld~~~~VFGrVieG~dvl~~i~~~~t~~~~p~~~I~L~~ 269 (403)
..++|.++|+||||+++|++++|||||++.++|+||++|+|||||++|||||++|+.+++..++|..+|.|..
T Consensus 95 ~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~vFG~Vv~G~dvv~~I~~~~t~~~~P~~~v~I~~ 167 (173)
T 2igv_A 95 FKEKHTGPGVLSMANAGPNTNGSQFFLCTVKTEWLDGKHVVFGRVVEGLDVVKAVESNGSQSGKPVKDCMIAD 167 (173)
T ss_dssp CCSCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTSCCSSCEEEEE
T ss_pred cccCCCCCeEEEEeeCCCCCcceEEEEEcCCccccCCCeeEEEEEecCHHHHHHHHhCCCCCCCCCCCEEEEE
Confidence 9999999999999999999999999999999999999999999999999999999999887788888886643
No 36
>1w74_A Peptidyl-prolyl CIS-trans isomerase A; cyclophilin, ppiase, RV0009, rotamase, structural proteomics in europe, spine; 2.6A {Mycobacterium tuberculosis} SCOP: b.62.1.1
Probab=100.00 E-value=4e-40 Score=300.10 Aligned_cols=135 Identities=45% Similarity=0.722 Sum_probs=123.8
Q ss_pred eeeeccccCCcchhhHHHhhcCCC-------------CCccCCceEEeecCCeEEEeCcCCCCCCCCCcccCCCCCCCCC
Q psy443 264 KIVLRSDVVPKTAENFRALCTGEK-------------GFGFKDSTFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKFEDEN 330 (403)
Q Consensus 264 ~I~L~~d~aP~t~enF~~L~~g~~-------------g~~Y~g~~f~Rvi~~f~iqgGd~~~~~g~gg~~~~g~~~~~e~ 330 (403)
.|+|+.+.+|++++||+.||+|++ ++ |+|+.||||+|+|||||||+.+ +|.|+ +|.+|++|.
T Consensus 36 ~ieL~~~~aP~tv~NF~~L~tG~~~~~~~~~g~~~~~~~-Y~g~~FhRVi~~fmiQgGd~~g-~G~gg---~g~~f~dE~ 110 (191)
T 1w74_A 36 KIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPF-YDGAVFHRVIQGFMIQGGDPTG-TGRGG---PGYKFADEF 110 (191)
T ss_dssp EEEECTTTSHHHHHHHHHHHHTCSCCSSCCTTBSSSSCS-STTEEEEEEETTTEEEECCTTS-SSSCC---SSCCBCCCC
T ss_pred EEEEcCCCChHHHHHHHHHhcCCcccccccccccccCCc-cCCCEEEEEeCCCEEecCCCCC-CCCCC---CCCcccccc
Confidence 449999999999999999998743 56 9999999999999999999864 66666 588999994
Q ss_pred -CCCCCCCCcEEEEecCCCCCCcceEEEEecCCCCCCCCceEEEEEEe--cHHHHHHHHhCCCCC-CCccccEEEeC
Q psy443 331 -FTLKHTGPGILSMANAGPNTNGSQFFITTVKTAWLDNRHVVFGSVVE--GLDVVKKLESMGSQS-GKTSKKIVCFN 403 (403)
Q Consensus 331 -~~~~h~~~G~lsma~~g~~s~gSqFfItl~~~~~Ld~~~~vfG~Vie--G~dvl~~i~~~~t~~-~~P~~~i~I~~ 403 (403)
..++|+++|+|||||.+|++|+|||||++.++|+||++|+|||||++ |||||++|++++++. ++|+++|+|.+
T Consensus 111 ~~~l~h~~~G~lsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~~~Gmdvv~~I~~~~t~~~~~P~~~v~I~~ 187 (191)
T 1w74_A 111 HPELQFDKPYLLAMANAGPGTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIES 187 (191)
T ss_dssp CTTCCSCSSSEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEECSHHHHHHHHHHHTSCBCTTSCBSSCCEEEE
T ss_pred ccCCCcCCCcEEEEeeCCCCCccceEEEEcCCCcccCCCeeEEEEEEECCCHHHHHHHHcCCcCCCCCcCCCeEEEE
Confidence 68999999999999999999999999999999999999999999999 999999999999965 89999999974
No 37
>3ich_A Peptidyl-prolyl CIS-trans isomerase B; beta sandwich, cyclosporin, endoplasmic reticulum, glycoprot isomerase, rotamase; 1.20A {Homo sapiens} PDB: 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=8.7e-40 Score=297.54 Aligned_cols=146 Identities=62% Similarity=0.977 Sum_probs=136.2
Q ss_pred EeeeeEEEEEcCCCChhhHHhHHHhhcCCCCcccCCCEEEeeeCCeEEEeCcCCCCCCCCCcccCCCcccCCCCccCCCc
Q psy443 124 WYRKGFKGRLRSDVVPKTAENFRALCTGEKGFGFKDSTFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTG 203 (403)
Q Consensus 124 T~~G~i~ieL~~d~aP~~~~nF~~L~~g~~g~~Y~~~~f~Rv~~~~~iqgGd~~~~~g~g~~~~~~~~~~~e~~~~~h~~ 203 (403)
|++|+|+||||++.||+||+||++||+|++||+|+++.||||+|+|||||||+..+++.|+.++|+..+++|...++|++
T Consensus 27 t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~~f~dE~~~l~h~~ 106 (188)
T 3ich_A 27 EDVGRVIFGLFGKTVPKTVDNFVALATGEKGFGYKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYG 106 (188)
T ss_dssp EEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBCCEEETTTEEEECCTTTSSSSCCCBTTBSCBCCCCCCSCCCS
T ss_pred EeceeEEEEEcCCCCcHHHHHHHHHhcccCCccccCCEEEEEECCCEEEcCCccCCCCCCCccccCCcccccccCcccCC
Confidence 78999999999999999999999999988898899999999999999999997777899999999999999998999999
Q ss_pred cceeeecccCCCCCcceeEEEeccCcCCCCceeEEEeEeecccccccccccCCCC-Ccccceeeecc
Q psy443 204 PGILSMANAGPNTNGSQFFITTVKTAWLDNRHVVFGSVVEGLDVVKKLESMGSQS-GKTSKKIVLRS 269 (403)
Q Consensus 204 ~G~ls~a~~~~~~~~SqFfI~l~~~~~Ld~~~~VFGrVieG~dvl~~i~~~~t~~-~~p~~~I~L~~ 269 (403)
+|+||||++++++++|||||++.++++||++|+|||||++||+||++|+.+++.. ++|..+|.|..
T Consensus 107 ~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~~~~~P~~~v~I~~ 173 (188)
T 3ich_A 107 PGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVESTKTDSRDKPLKDVIIAD 173 (188)
T ss_dssp TTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSSCEEEEE
T ss_pred CeEEEEccCCCCCcccEEEEECCCCcccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCeECCCEEEEE
Confidence 9999999999999999999999999999999999999999999999999998754 47777775543
No 38
>2k7n_A Peptidyl-prolyl CIS-trans isomerase-like 1; beta barrel, disorder-order transition, HOOK-like, mRNA processing, mRNA splicing, rotamase; NMR {Homo sapiens}
Probab=100.00 E-value=3.8e-40 Score=302.34 Aligned_cols=137 Identities=45% Similarity=0.823 Sum_probs=128.7
Q ss_pred ceeeeccccCCcchhhHHHhhcCCCCCccCCceEEeecCCeEEEeCcCCCCCCCCCcccCCCCCCCCC-CCCCCCCCcEE
Q psy443 263 KKIVLRSDVVPKTAENFRALCTGEKGFGFKDSTFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKFEDEN-FTLKHTGPGIL 341 (403)
Q Consensus 263 ~~I~L~~d~aP~t~enF~~L~~g~~g~~Y~g~~f~Rvi~~f~iqgGd~~~~~g~gg~~~~g~~~~~e~-~~~~h~~~G~l 341 (403)
..|+|+.+.+|++++||++|| +.+| |+++.||||+|+|||||||+++ ++.++.++|+.+|++|. ..++|.++|+|
T Consensus 23 I~ieL~~d~aP~tv~NF~~L~--~~g~-Ydg~~FhRVi~~F~iQgGd~~~-~g~gg~si~g~~f~dE~~~~l~h~~~G~l 98 (203)
T 2k7n_A 23 IVLELYWKHAPKTCKNFAELA--RRGY-YNGTKFHRIIKDFMIQGGDPTG-TGRGGASIYGKQFEDELHPDLKFTGAGIL 98 (203)
T ss_dssp EEEEECTTTCTTHHHHHHHHH--HHTC-GGGCEEEEEETTTEEEEECSSS-SSSCCCTTSCSCBCCCCCCSSCCCSSCEE
T ss_pred EEEEEccCCCcHHHHHHHHHH--hcCc-cCCCEEEEEeCCcEEEcCCCCC-CCCCCCccCCCcccccccccccCCCCeEE
Confidence 345999999999999999999 6788 9999999999999999999985 78889999999999998 47899999999
Q ss_pred EEecCCCCCCcceEEEEecCCCCCCCCceEEEEEEecHHHHHHHHhCCCCC-CCccccEEEeC
Q psy443 342 SMANAGPNTNGSQFFITTVKTAWLDNRHVVFGSVVEGLDVVKKLESMGSQS-GKTSKKIVCFN 403 (403)
Q Consensus 342 sma~~g~~s~gSqFfItl~~~~~Ld~~~~vfG~VieG~dvl~~i~~~~t~~-~~P~~~i~I~~ 403 (403)
||||.+||+|+|||||++.++|+||++|+|||||++|||||++|+.+++++ ++|+++|+|.+
T Consensus 99 sMAn~gpnsngSQFFIt~~~~~~LDg~~tVFG~VveGmdvv~kI~~~~t~~~~~P~~~V~I~~ 161 (203)
T 2k7n_A 99 AMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQDRPVDDVKIIK 161 (203)
T ss_dssp EEEESSTTCEEEEEEEESSCCCSSTTTSCEEEEEESCHHHHHHHHSCCEEETTEECCCCBEEE
T ss_pred EEeeCCCCCcccEEEEEcCCCCccCCCeeEEEEEEcCHHHHHHHHcCCcCCCCCcCCCeEEEE
Confidence 999999999999999999999999999999999999999999999999975 79999999863
No 39
>2a2n_A Peptidylprolyl isomerase domain and WD repeat CON; CIS-trans isomerization, protein-folding, peptidylprolyl ISO structural genomics; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=7.7e-40 Score=294.93 Aligned_cols=148 Identities=45% Similarity=0.738 Sum_probs=138.2
Q ss_pred eeeEEEEeeeeEEEEEcCCCChhhHHhHHHhhcCCCCcccCCCEEEeeeCCeEEEeCcCCCCCCCCCcccCCCcccCCCC
Q psy443 118 LANAIHWYRKGFKGRLRSDVVPKTAENFRALCTGEKGFGFKDSTFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKFEDENF 197 (403)
Q Consensus 118 ~~v~~~T~~G~i~ieL~~d~aP~~~~nF~~L~~g~~g~~Y~~~~f~Rv~~~~~iqgGd~~~~~g~g~~~~~~~~~~~e~~ 197 (403)
..|+++|++|+|+||||++.||+||+||++|| +.|| |+++.||||+|+||+||||+.. ++.|+.++|+..+++|..
T Consensus 22 ~~v~~~t~~G~i~ieL~~~~aP~t~~NF~~L~--~~g~-Y~g~~FhRvi~~f~iQgGd~~~-~g~gg~si~g~~~~dE~~ 97 (176)
T 2a2n_A 22 DSAIIHTSMGDIHTKLFPVECPKTVENFCVHS--RNGY-YNGHTFHRIIKGFMIQTGDPTG-TGMGGESIWGGEFEDEFH 97 (176)
T ss_dssp SEEEEEETTEEEEEEECTTTCHHHHHHHHHHH--HTTT-TTTCBCCEEETTTEEEECCTTS-SSSCCCCTTSSCBCCCCC
T ss_pred CEEEEEecCccEEEEEeCCCChHHHHHHHHHh--hcCc-cCCCEEEEEECCcEEEccCCCC-CCCCCCcccCCccccccc
Confidence 67999999999999999999999999999999 7889 9999999999999999999976 789999999999999987
Q ss_pred -ccCCCccceeeecccCCCCCcceeEEEeccCcCCCCceeEEEeEeecccccccccccCCC--CCcccceeeecc
Q psy443 198 -TLKHTGPGILSMANAGPNTNGSQFFITTVKTAWLDNRHVVFGSVVEGLDVVKKLESMGSQ--SGKTSKKIVLRS 269 (403)
Q Consensus 198 -~~~h~~~G~ls~a~~~~~~~~SqFfI~l~~~~~Ld~~~~VFGrVieG~dvl~~i~~~~t~--~~~p~~~I~L~~ 269 (403)
.++|.++|+||||+++|++++|||||++.++|+||++|+|||||++|||||++|+++++. .++|..+|.|..
T Consensus 98 ~~l~h~~~G~lsmA~~gp~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~~P~~~v~I~~ 172 (176)
T 2a2n_A 98 STLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVTKGMEVVQRISNVKVNPKTDKPYEDVSIIN 172 (176)
T ss_dssp TTCCSCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTTCCBSSCCBEEE
T ss_pred cccccCCceEEEEEeCCCCCcccEEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHcCCccCCCCccCCCeEEEE
Confidence 689999999999999999999999999999999999999999999999999999998875 678887776543
No 40
>1a58_A Cyclophilin; isomerase, ppiase; 1.95A {Brugia malayi} SCOP: b.62.1.1 PDB: 1a33_A 1c5f_A*
Probab=100.00 E-value=1.2e-39 Score=294.31 Aligned_cols=154 Identities=49% Similarity=0.819 Sum_probs=139.5
Q ss_pred cccccccccccceeeEEEEeeeeEEEEEcCCCChhhHHhHHHhhcCCCC---------cccCCCEEEeeeCCeEEEeCcC
Q psy443 106 KFVESQYKDKQSLANAIHWYRKGFKGRLRSDVVPKTAENFRALCTGEKG---------FGFKDSTFHRVIPNFMCQGGDF 176 (403)
Q Consensus 106 ~f~~~~~~~~~s~~v~~~T~~G~i~ieL~~d~aP~~~~nF~~L~~g~~g---------~~Y~~~~f~Rv~~~~~iqgGd~ 176 (403)
+|.|..+.. |++|+|+||||++.||+||+||++||+++++ | |+++.||||+|+|||||||+
T Consensus 9 v~~di~i~~---------~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~~~~g~~~~-Y~g~~FhRvi~~f~iQgGd~ 78 (177)
T 1a58_A 9 VFLDVTIDG---------NLAGRIVMELYNDIAPRTCNNFLMLCTGMAGTGKISGKPLH-YKGSTFHRVIKNFMIQGGDF 78 (177)
T ss_dssp EEEEEEETT---------EEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBCC-CTTCBEEEEETTTEEEECCC
T ss_pred EEEEEEECC---------EeceeEEEEEcCCCCchHHHHHHHHhcCCcCcccccCCcce-eCCCEEEEEECCCEEEeCCc
Confidence 556655554 5899999999999999999999999986432 6 99999999999999999999
Q ss_pred CCCCCCCCcccCCCcccCCCCccCCCccceeeecccCCCCCcceeEEEeccCcCCCCceeEEEeEeecccccccccccCC
Q psy443 177 TNHNGTGGKSIYGNKFEDENFTLKHTGPGILSMANAGPNTNGSQFFITTVKTAWLDNRHVVFGSVVEGLDVVKKLESMGS 256 (403)
Q Consensus 177 ~~~~g~g~~~~~~~~~~~e~~~~~h~~~G~ls~a~~~~~~~~SqFfI~l~~~~~Ld~~~~VFGrVieG~dvl~~i~~~~t 256 (403)
+.+++.|+.++|+..+++|...++|+++|+||||+++|++++|||||++.++|+||++|+|||+|++|||||++|+.+++
T Consensus 79 ~~~~g~gg~si~g~~f~dE~~~~~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~VFG~Vv~G~dvv~~I~~~~~ 158 (177)
T 1a58_A 79 TKGDGTGGESIYGGMFDDEEFVMKHDEPFVVSMANKGPNTNGSQFFITTTPAPHLNNIHVVFGKVVSGQEVVTKIEYLKT 158 (177)
T ss_dssp SSSSSSCCCCTTSSCBCCCCCCSCCCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCB
T ss_pred cCCCCCCCCcccCCcccCcccCcccCCCeEEEEeeCCCCCceeEEEEECCCCCccCCCEEEEEEEEcCHHHHHHHHhCCC
Confidence 87789999999999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred C-CCcccceeeecc
Q psy443 257 Q-SGKTSKKIVLRS 269 (403)
Q Consensus 257 ~-~~~p~~~I~L~~ 269 (403)
. .++|..+|.|..
T Consensus 159 ~~~~~P~~~v~I~~ 172 (177)
T 1a58_A 159 NSKNRPLADVVILN 172 (177)
T ss_dssp CTTSCBSSCEEEEE
T ss_pred CCCCcCCCCeEEEE
Confidence 5 468888876543
No 41
>2poy_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, isomerase, S genomics, structural genomics consortium; HET: BMT; 1.80A {Cryptosporidium parvum iowa II} PDB: 2plu_A*
Probab=100.00 E-value=1.5e-39 Score=295.37 Aligned_cols=146 Identities=62% Similarity=1.015 Sum_probs=137.0
Q ss_pred EeeeeEEEEEcCCCChhhHHhHHHhhcCCCCcc-------cCCCEEEeeeCCeEEEeCcCCCCCCCCCcccCCCcccCCC
Q psy443 124 WYRKGFKGRLRSDVVPKTAENFRALCTGEKGFG-------FKDSTFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKFEDEN 196 (403)
Q Consensus 124 T~~G~i~ieL~~d~aP~~~~nF~~L~~g~~g~~-------Y~~~~f~Rv~~~~~iqgGd~~~~~g~g~~~~~~~~~~~e~ 196 (403)
|+.|+|+||||++.||+||+||++||++++||+ |+++.||||+|+|||||||++.+++.|+.++|+..+++|.
T Consensus 31 t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~Y~g~~FhRVi~~f~iQgGd~~~~~G~gg~si~g~~f~dE~ 110 (186)
T 2poy_A 31 TPAGRITMELFADKVPITAENFRALCTGEKGMGQSGKPLCYTGSFFHRIIPQFMIQGGDFTRGDGTGGESIYGSKFRDEN 110 (186)
T ss_dssp EEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETTTEEEECCTTTSSSSCCCCTTC-CBCCCC
T ss_pred EecccEEEEEeCCCCcHHHHHHHHHhcccCCccccCccceECCCEEEEEeCCCEEEeCCCCCCCCCCCCccCCCcccCcc
Confidence 479999999999999999999999998888885 9999999999999999999987789999999999999999
Q ss_pred CccCCCccceeeecccCCCCCcceeEEEeccCcCCCCceeEEEeEeecccccccccccCCCCCcccceeeecc
Q psy443 197 FTLKHTGPGILSMANAGPNTNGSQFFITTVKTAWLDNRHVVFGSVVEGLDVVKKLESMGSQSGKTSKKIVLRS 269 (403)
Q Consensus 197 ~~~~h~~~G~ls~a~~~~~~~~SqFfI~l~~~~~Ld~~~~VFGrVieG~dvl~~i~~~~t~~~~p~~~I~L~~ 269 (403)
..++|.++|+||||+++|++++|||||++.++|+||++|+|||||++|||||++|+.+++..++|..+|.|..
T Consensus 111 ~~l~h~~~G~lsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~P~~~v~I~~ 183 (186)
T 2poy_A 111 FVYTHDAPFLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGKVLEGMEVVKSIEKCGSQNGKPTKSVCITA 183 (186)
T ss_dssp CCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHTCCTTSCCSSCEEEEE
T ss_pred cccccCCCcEEEEeeCCCCCcccEEEEECCCCcccCCCeeEEEEEecCHHHHHHHHhCCCCCCCCCCCEEEEe
Confidence 9999999999999999999999999999999999999999999999999999999999988888888886643
No 42
>3rdd_A Peptidyl-prolyl CIS-trans isomerase A; beta barrel, cytosolic, inhibito isomerase-isomerase inhibitor complex; HET: EA4; 2.14A {Homo sapiens}
Probab=100.00 E-value=1.8e-39 Score=294.60 Aligned_cols=152 Identities=68% Similarity=1.090 Sum_probs=142.4
Q ss_pred eeeEEEEe-----eeeEEEEEcCCCChhhHHhHHHhhcCCCCcccCCCEEEeeeCCeEEEeCcCCCCCCCCCcccCCCcc
Q psy443 118 LANAIHWY-----RKGFKGRLRSDVVPKTAENFRALCTGEKGFGFKDSTFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKF 192 (403)
Q Consensus 118 ~~v~~~T~-----~G~i~ieL~~d~aP~~~~nF~~L~~g~~g~~Y~~~~f~Rv~~~~~iqgGd~~~~~g~g~~~~~~~~~ 192 (403)
..|.|+|+ +|+|+||||++.||+||+||++||+++.|++|+++.||||+|+||+||||+..+++.|+.++++..+
T Consensus 23 p~v~~di~i~~~~~G~I~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~~~ 102 (184)
T 3rdd_A 23 PTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKF 102 (184)
T ss_dssp CEEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHTTTSCSSTTCBCCEEETTTEEEECCTTTSSSSCCCBTTBSCB
T ss_pred CEEEEEEeECCEeeeEEEEEEeCCCCcHHHHHHHHHhccCcCcccCCCEEEEccCCcEEEeCCCCCCCCCCCcccCCCcc
Confidence 45666665 9999999999999999999999999888888999999999999999999988889999999999999
Q ss_pred cCCCCccCCCccceeeecccCCCCCcceeEEEeccCcCCCCceeEEEeEeecccccccccccCCCCCcccceeeecc
Q psy443 193 EDENFTLKHTGPGILSMANAGPNTNGSQFFITTVKTAWLDNRHVVFGSVVEGLDVVKKLESMGSQSGKTSKKIVLRS 269 (403)
Q Consensus 193 ~~e~~~~~h~~~G~ls~a~~~~~~~~SqFfI~l~~~~~Ld~~~~VFGrVieG~dvl~~i~~~~t~~~~p~~~I~L~~ 269 (403)
++|...++|.++|+||||+++|++++|||||++.++++||++|+|||||++|||||++|+++++..++|..+|.|..
T Consensus 103 ~de~~~l~h~~~G~lsmA~~gp~s~gSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~~g~P~~~v~I~~ 179 (184)
T 3rdd_A 103 EDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIAD 179 (184)
T ss_dssp CCCCCCSCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTSCCSSCEEEEE
T ss_pred cCcccccccCCCcEEEEEeCCCCCcccEEEEEeCCchhhCCCceEEEEEecCHHHHHHHHhcCCCCCCCcCCeEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999988888988886654
No 43
>1qng_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, cyclophilin-cyclosporin complex, immunosuppressant, cyclophilin; HET: BMT; 2.1A {Plasmodium falciparum} SCOP: b.62.1.1 PDB: 1qnh_A*
Probab=100.00 E-value=1.2e-39 Score=292.52 Aligned_cols=144 Identities=59% Similarity=1.052 Sum_probs=134.9
Q ss_pred eeeeEEEEEcCCCChhhHHhHHHhhcCCCCcc-------cCCCEEEeeeCCeEEEeCcCCCCCCCCCcccCCCcccCCCC
Q psy443 125 YRKGFKGRLRSDVVPKTAENFRALCTGEKGFG-------FKDSTFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKFEDENF 197 (403)
Q Consensus 125 ~~G~i~ieL~~d~aP~~~~nF~~L~~g~~g~~-------Y~~~~f~Rv~~~~~iqgGd~~~~~g~g~~~~~~~~~~~e~~ 197 (403)
++|+|+||||++.||+||+||++||+++ ||+ |+++.||||+|+||+||||++.+++.|+.++|+..+++|..
T Consensus 16 ~~G~i~ieL~~~~aP~t~~NF~~L~~~~-g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~~f~dE~~ 94 (170)
T 1qng_A 16 NAGRIIFELFSDITPRTCENFRALCTGE-KIGSRGKNLHYKNSIFHRIIPQFMCQGGDITNGNGSGGESIYGRSFTDENF 94 (170)
T ss_dssp EEEEEEEEECTTTCHHHHHHHHHHHHTC-EECTTSSEECCTTCBCCEEETTTEEEECCTTTSSSSCCCBTTBSCBCCCCC
T ss_pred eceeEEEEEcCCCCCHHHHHHHHHhccC-CcCccCccceECCCEEEEEECCCEEEcCCccCCCCCCCccccCCccccccc
Confidence 6999999999999999999999999754 664 99999999999999999999877899999999999999999
Q ss_pred ccCCCccceeeecccCCCCCcceeEEEeccCcCCCCceeEEEeEeecccccccccccCCCCCcccceeeecc
Q psy443 198 TLKHTGPGILSMANAGPNTNGSQFFITTVKTAWLDNRHVVFGSVVEGLDVVKKLESMGSQSGKTSKKIVLRS 269 (403)
Q Consensus 198 ~~~h~~~G~ls~a~~~~~~~~SqFfI~l~~~~~Ld~~~~VFGrVieG~dvl~~i~~~~t~~~~p~~~I~L~~ 269 (403)
.++|.++|+||||+++|++++|||||++.++|+||++|+|||||++|||||++|+++++..++|..+|.|..
T Consensus 95 ~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~Ldg~~~vFG~Vv~G~dvv~~I~~~~t~~~~P~~~v~I~~ 166 (170)
T 1qng_A 95 NMKHDQPGLLSMANAGPNTNSSQFFITLVPCPWLDGKHVVFGKVIEGMNVVREMEKEGAKSGYVKRSVVITD 166 (170)
T ss_dssp CSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTCCCSSCEEEEE
T ss_pred ccccCCCCEEEEeecCCCCcccEEEEECCCCcccCCCeeEEEEEECCHHHHHHHHhCCCCCCCCCCCeEEEe
Confidence 999999999999999999999999999999999999999999999999999999999987788888876643
No 44
>1zkc_A Peptidyl-prolyl CIS-trans isomerase like 2; CIS-trans isomerization, peptidylprolyl isomerase, protein- folding, structural genomics consortium; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=1.5e-39 Score=297.28 Aligned_cols=147 Identities=46% Similarity=0.761 Sum_probs=137.2
Q ss_pred eeeEEEEeeeeEEEEEcCCCChhhHHhHHHhhcCCCCcccCCCEEEeeeCCeEEEeCcCCCCCCCCCcccCCCcccCCC-
Q psy443 118 LANAIHWYRKGFKGRLRSDVVPKTAENFRALCTGEKGFGFKDSTFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKFEDEN- 196 (403)
Q Consensus 118 ~~v~~~T~~G~i~ieL~~d~aP~~~~nF~~L~~g~~g~~Y~~~~f~Rv~~~~~iqgGd~~~~~g~g~~~~~~~~~~~e~- 196 (403)
..|+|+|++|+|+||||++.||+||+||++|| +.|| |+++.||||+|+|||||||+++ ++.|+.++||..+++|.
T Consensus 20 ~~v~l~T~~G~I~ieL~~~~aP~tv~NF~~L~--~~g~-Ydg~~FhRVi~~f~iQgGd~~~-~g~Gg~si~g~~f~dE~~ 95 (197)
T 1zkc_A 20 GYVRLHTNKGDLNLELHCDLTPKTCENFIRLC--KKHY-YDGTIFHRSIRNFVIQGGDPTG-TGTGGESYWGKPFKDEFR 95 (197)
T ss_dssp EEEEEEETTEEEEEEECTTTSHHHHHHHHHHH--HTTT-TTTEEEEEEETTTEEEECCTTS-SSSCCCBTTBSCBCCCCC
T ss_pred cEEEEEeCCccEEEEEcCCCCcHHHHHHHHHH--hcCC-CCCCEEEEEeCCCEEEcCCCCC-CCCCCCccCCCccccccC
Confidence 78999999999999999999999999999999 7899 9999999999999999999986 88999999999999994
Q ss_pred CccCCCccceeeecccCCCCCcceeEEEeccCcCCCCceeEEEeEeecccccccccccCCCC--Ccccceeeec
Q psy443 197 FTLKHTGPGILSMANAGPNTNGSQFFITTVKTAWLDNRHVVFGSVVEGLDVVKKLESMGSQS--GKTSKKIVLR 268 (403)
Q Consensus 197 ~~~~h~~~G~ls~a~~~~~~~~SqFfI~l~~~~~Ld~~~~VFGrVieG~dvl~~i~~~~t~~--~~p~~~I~L~ 268 (403)
..++|.++|+||||+++|++++|||||++.++++||++|+|||+|++|||||++|+.+++.. ++|..+|.|.
T Consensus 96 ~~l~h~~~G~lsMAn~gp~sngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~~P~~~i~I~ 169 (197)
T 1zkc_A 96 PNLSHTGRGILSMANSGPNSNRSQFFITFRSCAYLDKKHTIFGRVVGGFDVLTAMENVESDPKTDRPKEEIRID 169 (197)
T ss_dssp TTCCSCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHSCBCTTTCCBSSCCEEE
T ss_pred cCcCCCCceEEEEecCCCCCcccEEEEEcCCCCccCCCccEEEEEEcCHHHHHHHHcCCCCCCCCCcCCCeEEE
Confidence 67899899999999999999999999999999999999999999999999999999988754 6777776443
No 45
>2wfi_A Peptidyl-prolyl CIS-trans isomerase G; phosphoprotein, PRE-mRNA splicing, alternative splicing, nucleus, rotamase, cyclosporin; HET: OCS; 0.75A {Homo sapiens} PDB: 2wfj_A* 2gw2_A
Probab=100.00 E-value=1.8e-39 Score=293.56 Aligned_cols=153 Identities=48% Similarity=0.760 Sum_probs=140.2
Q ss_pred cccccccccccceeeEEEEeeeeEEEEEcCCCChhhHHhHHHhhcCC---------CCcccCCCEEEeeeCCeEEEeCcC
Q psy443 106 KFVESQYKDKQSLANAIHWYRKGFKGRLRSDVVPKTAENFRALCTGE---------KGFGFKDSTFHRVIPNFMCQGGDF 176 (403)
Q Consensus 106 ~f~~~~~~~~~s~~v~~~T~~G~i~ieL~~d~aP~~~~nF~~L~~g~---------~g~~Y~~~~f~Rv~~~~~iqgGd~ 176 (403)
+|.|..+.. |++|+|+||||++.||+||+||++||+|+ .+| |+++.||||+|+|||||||+
T Consensus 12 vf~di~i~~---------t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~~-Y~g~~FhRvi~~f~iQgGd~ 81 (179)
T 2wfi_A 12 CFFDIAINN---------QPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLH-YKSCLFHRVVKDFMVQGGDF 81 (179)
T ss_dssp EEEEEEETT---------EEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSC-CTTCBEEEEETTTEEEECCT
T ss_pred EEEEEEECC---------ccceEEEEEEcCCCCChHHHHHHHHhcCCcCcccccccCCe-ECCCEEEEEECCCEEEcccc
Confidence 666766655 69999999999999999999999999765 446 99999999999999999999
Q ss_pred CCCCCCCCcccCCCcccCCCCccCCCccceeeecccCCCCCcceeEEEeccCcCCCCceeEEEeEeecccccccccccCC
Q psy443 177 TNHNGTGGKSIYGNKFEDENFTLKHTGPGILSMANAGPNTNGSQFFITTVKTAWLDNRHVVFGSVVEGLDVVKKLESMGS 256 (403)
Q Consensus 177 ~~~~g~g~~~~~~~~~~~e~~~~~h~~~G~ls~a~~~~~~~~SqFfI~l~~~~~Ld~~~~VFGrVieG~dvl~~i~~~~t 256 (403)
+.+++.|+.++|+..+++|...++|.++|+||||+++|++++|||||++.++|+||++|+|||||++|||||++|+++++
T Consensus 82 ~~~~g~gg~si~g~~f~dE~~~~~h~~~G~lsMAn~gp~tngSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~t 161 (179)
T 2wfi_A 82 SEGNGRGGESIYGGFFEDESFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIENQKT 161 (179)
T ss_dssp TTSSSSCCCCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTCCB
T ss_pred cCCCCCCCCcccCCcccccccCcCcCCCeEEEEEeCCCCCcceEEEEEcCCCcccCCCeeEEEEEeCCHHHHHHHHcCCC
Confidence 87789999999999999999999999999999999999999999999999999999999999999999999999999886
Q ss_pred C-CCcccceeeec
Q psy443 257 Q-SGKTSKKIVLR 268 (403)
Q Consensus 257 ~-~~~p~~~I~L~ 268 (403)
. .++|..+|.|.
T Consensus 162 ~~~~~P~~~v~I~ 174 (179)
T 2wfi_A 162 DAASKPFAEVRIL 174 (179)
T ss_dssp CTTSCBSSCEEEE
T ss_pred CCCCCCCCCeEEE
Confidence 4 46888887654
No 46
>3bo7_A Peptidyl-prolyl CIS-trans isomerase cyclophilin-T; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, structural G structural genomics consortium, SGC; HET: BMT; 2.35A {Toxoplasma gondii}
Probab=100.00 E-value=7.8e-40 Score=301.15 Aligned_cols=137 Identities=40% Similarity=0.637 Sum_probs=122.8
Q ss_pred ceeeeccccCCcchhhHHHhhcCCCCCccCCceEEeecCCeEEEeC-----cCCCCCCCCCcccC-------CCCCCCCC
Q psy443 263 KKIVLRSDVVPKTAENFRALCTGEKGFGFKDSTFHRVIPNFMCQGG-----DFTNHNGTGGKSIY-------GNKFEDEN 330 (403)
Q Consensus 263 ~~I~L~~d~aP~t~enF~~L~~g~~g~~Y~g~~f~Rvi~~f~iqgG-----d~~~~~g~gg~~~~-------g~~~~~e~ 330 (403)
..|+|+.+.+|+|++||+.|| +.|| |+|+.||||+|+|||||| |+++ +|.||.++| |.+|++|.
T Consensus 18 i~ieL~~~~aP~t~~NF~~L~--~~g~-Ydg~~FhRvi~~f~iQgG~~~~~Dp~~-~g~gg~si~~~~~~~~g~~f~dE~ 93 (201)
T 3bo7_A 18 LNIELHADMAPRACDSFLRLC--AVKY-FDDTIFHRCIRNFMIQGGRAELRQPSK-KKEVQQSPRSISGFPGGAPFEDEF 93 (201)
T ss_dssp EEEEECTTTCHHHHHHHHHHH--HTTT-TTTCBEEEEETTTEEEECCGGGCCC--------CCSSCCCSSTTCCCBCCCC
T ss_pred EEEEEcCCCCcHHHHHHHHHH--hcCc-cCCCEEEEeeCCCEEEcCcccccCCCC-CCCCCccccccccccCCCcccCcc
Confidence 345999999999999999999 6788 999999999999999999 9884 788999999 89999995
Q ss_pred -CCCCCCCCcEEEEecCCCCCCcceEEEEecCCCCCCCCceEEEEEEecHHHHHHHHhCCCCC-CCccccEEEeC
Q psy443 331 -FTLKHTGPGILSMANAGPNTNGSQFFITTVKTAWLDNRHVVFGSVVEGLDVVKKLESMGSQS-GKTSKKIVCFN 403 (403)
Q Consensus 331 -~~~~h~~~G~lsma~~g~~s~gSqFfItl~~~~~Ld~~~~vfG~VieG~dvl~~i~~~~t~~-~~P~~~i~I~~ 403 (403)
..++|+++|+|||||.+|++|+|||||+++++|+||++|+|||+|++|||||++|+.++++. ++|.++|+|.+
T Consensus 94 ~~~l~h~~~G~lsmA~~gp~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P~~~i~I~~ 168 (201)
T 3bo7_A 94 DNRLVHQGIGVLSMANDGKHSNLSEFFITFKSCEHLNNKHTIFGRVVGGLDVLRQWEKLETDKKDKPLKPPKVEE 168 (201)
T ss_dssp CTTCCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHTTCCBCTTSCBSSCCBEEE
T ss_pred cCCCCcCCCcEEEEeeCCCCCcccEEEEECCCCcccCCCceEEEEEecCHHHHHHHHhCCcCCCCCcCCCeEEEE
Confidence 68899999999999999999999999999999999999999999999999999999999976 89999999863
No 47
>2poe_A Cyclophilin-like protein, putative; cryptosporidium parvum cyclophilin isomerase, structural genomics; 2.01A {Cryptosporidium parvum iowa II} PDB: 2qer_A
Probab=100.00 E-value=1.3e-39 Score=295.69 Aligned_cols=147 Identities=41% Similarity=0.654 Sum_probs=136.8
Q ss_pred eeeEEEEeeeeEEEEEcCCCChhhHHhHHHhhcCCCCcccCCCEEEeeeCCeEEEeCcCCCCCCCCCcccCCCcccCCC-
Q psy443 118 LANAIHWYRKGFKGRLRSDVVPKTAENFRALCTGEKGFGFKDSTFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKFEDEN- 196 (403)
Q Consensus 118 ~~v~~~T~~G~i~ieL~~d~aP~~~~nF~~L~~g~~g~~Y~~~~f~Rv~~~~~iqgGd~~~~~g~g~~~~~~~~~~~e~- 196 (403)
+.|+|+|++|+|+||||++.||+||+||++|| +.|| |+++.||||+|+||+||||++. ++.|+.++|+..+++|.
T Consensus 17 ~~v~i~t~~G~i~ieL~~~~aP~t~~NF~~L~--~~g~-Y~g~~FhRvi~~f~iQgGd~~~-~g~gg~si~g~~~~dE~~ 92 (185)
T 2poe_A 17 QGVRIITNYGDLKFELFCSQCPKACKNFLALS--ASGY-YKNTIFHKNIKGFIIQGGDPTG-TGKGGESIYGRYFDDEIY 92 (185)
T ss_dssp CEEEEEETTEEEEEEECTTTCHHHHHHHHHHH--HTTT-TTTEEEEEECTTSEEEEEETTS-SSSCCCBTTBSCBCCCCC
T ss_pred eEEEEEecCccEEEEEeCCCCcHHHHHHHHHh--ccCC-CCCCEEEEEECCCEEEcCCCCC-CCCCCCccCCCccccccc
Confidence 78999999999999999999999999999999 7889 9999999999999999999985 88999999999999997
Q ss_pred CccCCCccceeeecccC----CCCCcceeEEEeccCcCCCCceeEEEeEeecccccccccccCCC-CCcccceeeec
Q psy443 197 FTLKHTGPGILSMANAG----PNTNGSQFFITTVKTAWLDNRHVVFGSVVEGLDVVKKLESMGSQ-SGKTSKKIVLR 268 (403)
Q Consensus 197 ~~~~h~~~G~ls~a~~~----~~~~~SqFfI~l~~~~~Ld~~~~VFGrVieG~dvl~~i~~~~t~-~~~p~~~I~L~ 268 (403)
..++|.++|+||||+++ |++++|||||++.++|+||++|+|||||++||+||++|+++++. .++|..+|.|.
T Consensus 93 ~~l~h~~~G~lsmA~~g~~~~p~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P~~~v~I~ 169 (185)
T 2poe_A 93 PELKYDRRGILSMASKGASKKPNTNGSQFFITYSSLPQLNGEYVIFGKLIDGFETLNTLENCPSDKSHKPIDEIIIK 169 (185)
T ss_dssp TTSCCCSTTEEEECCSCC-CCCSCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHSCBCTTSCBSSCCEEE
T ss_pred CCCccCCCeEEEEecCCCCCCCCCccceEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCCcCCCeEEE
Confidence 67899899999999999 99999999999999999999999999999999999999998864 46777776443
No 48
>2b71_A Cyclophilin-like protein; structural genomics, structural genomics consortium, SGC, isomerase; 2.50A {Plasmodium yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=1.8e-39 Score=296.74 Aligned_cols=148 Identities=45% Similarity=0.693 Sum_probs=137.6
Q ss_pred eeeEEEEeeeeEEEEEcCCCChhhHHhHHHhhcCCCCcccCCCEEEeeeCCeEEEeCcCCCCCCCCCcccCCCcccCCC-
Q psy443 118 LANAIHWYRKGFKGRLRSDVVPKTAENFRALCTGEKGFGFKDSTFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKFEDEN- 196 (403)
Q Consensus 118 ~~v~~~T~~G~i~ieL~~d~aP~~~~nF~~L~~g~~g~~Y~~~~f~Rv~~~~~iqgGd~~~~~g~g~~~~~~~~~~~e~- 196 (403)
+.|.|+|++|+|+||||++.||+||+||++|| +.|| |+++.||||+|+||+||||++. ++.|+.++||..+++|.
T Consensus 39 ~~V~l~T~~G~I~ieL~~~~aP~tv~NF~~L~--~~g~-Y~g~~FhRVi~~f~iQgGd~~~-~g~gg~si~g~~~~dE~~ 114 (196)
T 2b71_A 39 GYITIYTNLGDFEVELYWYHSPKTCLNFYTLC--EMGF-YDNTIFHRVIPNFVIQGGDPTG-TGKGGKSIYGEYFEDEIN 114 (196)
T ss_dssp CEEEEEETTEEEEEEECTTTSHHHHHHHHHHH--HTTT-TTTEEEEEEETTTEEEEEETTS-SSSCCCBTTBSCBCCCCC
T ss_pred cEEEEEeCCCCEEEEEeCCCCcHHHHHHHHHh--hcCC-cCCCEEEEEeCCcEEEcCCCCC-CCCCCCccCCCccccccc
Confidence 67999999999999999999999999999999 7899 9999999999999999999985 88999999999999995
Q ss_pred CccCCCccceeeecccCCCCCcceeEEEeccCcCCCCceeEEEeEeecccccccccccCCC-CCcccceeeecc
Q psy443 197 FTLKHTGPGILSMANAGPNTNGSQFFITTVKTAWLDNRHVVFGSVVEGLDVVKKLESMGSQ-SGKTSKKIVLRS 269 (403)
Q Consensus 197 ~~~~h~~~G~ls~a~~~~~~~~SqFfI~l~~~~~Ld~~~~VFGrVieG~dvl~~i~~~~t~-~~~p~~~I~L~~ 269 (403)
..++|+++|+||||+++|++++|||||++.++|+||++|+|||||++||+||++|+++++. .++|..+|.|..
T Consensus 115 ~~l~h~~~G~lsMAn~gpns~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P~~~i~I~~ 188 (196)
T 2b71_A 115 KELKHTGAGILSMSNNGPNTNSSQFFITLAPLPHLDGKHTIFARVSKNMTCIENIASVQTTATNKPIFDLKILR 188 (196)
T ss_dssp TTCCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTCCBSSCCEEEE
T ss_pred CCcCcCCCeEEEEccCCCCCcccEEEEECCCCCccCCCEeEEEEEecCHHHHHHHHhCCcCCCCCCCCCeEEEE
Confidence 5789989999999999999999999999999999999999999999999999999998864 468877775543
No 49
>2c3b_A Ppiase, cyclophilin; isomerase, 3D domain swapping, misfolding, Asp F 11, allergen, rotamase; 1.85A {Aspergillus fumigatus} SCOP: b.62.1.1
Probab=100.00 E-value=2.9e-40 Score=296.96 Aligned_cols=159 Identities=55% Similarity=0.899 Sum_probs=114.6
Q ss_pred cccccccccccceeeEEEEeeeeEEEEEcCCCChhhHHhHHHhhcCCCCcccCCCEEEeeeCCeEEEeCcCCCCCCCCCc
Q psy443 106 KFVESQYKDKQSLANAIHWYRKGFKGRLRSDVVPKTAENFRALCTGEKGFGFKDSTFHRVIPNFMCQGGDFTNHNGTGGK 185 (403)
Q Consensus 106 ~f~~~~~~~~~s~~v~~~T~~G~i~ieL~~d~aP~~~~nF~~L~~g~~g~~Y~~~~f~Rv~~~~~iqgGd~~~~~g~g~~ 185 (403)
+|.|..+.+. -.+.|++|+|+||||++.||+||+||++||+|++|++|+++.||||+|+||+||||+..+++.|+.
T Consensus 5 vf~di~i~~~----~~~~T~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~fhRvi~~f~iQgGd~~~~~g~gg~ 80 (172)
T 2c3b_A 5 VFFDVEYAPV----GTAETKVGRIVFNLFDKDVPKTAKNFRELCKRPAGEGYRESTFHRIIPNFMIQGGDFTRGNGTGGR 80 (172)
T ss_dssp EEEEEEECCT----TCSCCEEEEEEEEECTTTSHHHHHHHHHHHHSCTTTSSTTCBCCEEETTTEEEECC----------
T ss_pred EEEEEEeCCC----CceecccccEEEEEcCCCCcHHHHHHHHHhccCCCcccCCCEEEEEeCCCEEEeCCcCCCCCCCCc
Confidence 5666666522 124589999999999999999999999999888888899999999999999999996666899999
Q ss_pred ccCCCcccCCCCccCCCccceeeecccCCCCCcceeEEEeccCcCCCCceeEEEeEee--cccccccccccCCCCC--cc
Q psy443 186 SIYGNKFEDENFTLKHTGPGILSMANAGPNTNGSQFFITTVKTAWLDNRHVVFGSVVE--GLDVVKKLESMGSQSG--KT 261 (403)
Q Consensus 186 ~~~~~~~~~e~~~~~h~~~G~ls~a~~~~~~~~SqFfI~l~~~~~Ld~~~~VFGrVie--G~dvl~~i~~~~t~~~--~p 261 (403)
++|+..+++|...++|+++|+||||+++|++++|||||++.++|+||++|+|||||++ ||+||++|+++++..+ +|
T Consensus 81 si~g~~f~dE~~~~~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tvFG~Vv~~~G~dvv~~I~~~~t~~~~~~P 160 (172)
T 2c3b_A 81 SIYGDKFADENFSRKHDKKGILSMANAGPNTNGSQFFITTAVTSWLDGKHVVFGEVADEKSYSVVKEIEALGSSSGSVRS 160 (172)
T ss_dssp ------------CHHHHHTCEEEEC---------CEEEECSCCTTCCSCCEEEEEECSHHHHHHHHHHHTTCCTTSCCCS
T ss_pred ccCCCcccCcccccccCCCeEEEEeeCCCCCcccEEEEECCCCCccCCCeeEEEEEEecCCHHHHHHHHhCCCCCCCccC
Confidence 9999999999889999999999999999999999999999999999999999999999 9999999999987655 78
Q ss_pred cceeeec
Q psy443 262 SKKIVLR 268 (403)
Q Consensus 262 ~~~I~L~ 268 (403)
..+|.|.
T Consensus 161 ~~~v~I~ 167 (172)
T 2c3b_A 161 NTRPKIV 167 (172)
T ss_dssp SSCCEEE
T ss_pred CCCeEEE
Confidence 7777654
No 50
>2he9_A NK-tumor recognition protein; cyclosporin, isomerase, membrane, repeat, rotamase, peptidylprolyl isomerase, structural genomics; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.5e-39 Score=294.27 Aligned_cols=156 Identities=46% Similarity=0.726 Sum_probs=141.4
Q ss_pred cccccccccccccceeeEEEEeeeeEEEEEcCCCChhhHHhHHHhhcCC---------CCcccCCCEEEeeeCCeEEEeC
Q psy443 104 KDKFVESQYKDKQSLANAIHWYRKGFKGRLRSDVVPKTAENFRALCTGE---------KGFGFKDSTFHRVIPNFMCQGG 174 (403)
Q Consensus 104 ~~~f~~~~~~~~~s~~v~~~T~~G~i~ieL~~d~aP~~~~nF~~L~~g~---------~g~~Y~~~~f~Rv~~~~~iqgG 174 (403)
..+|.|..+.. |++|+|+||||++.||+||+||++||+|+ .+| |+++.||||+|+||||||
T Consensus 20 ~~vf~di~i~~---------t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~k~~~-Y~g~~FhRVi~~fmiQgG 89 (192)
T 2he9_A 20 PQCHFDIEINR---------EPVGRIMFQLFSDICPKTCKNFLCLCSGEKGLGKTTGKKLC-YKGSTFHRVVKNFMIQGG 89 (192)
T ss_dssp CEEEEEEEETT---------EEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSC-CTTCBEEEEETTTEEEEC
T ss_pred CeEEEEEEECC---------EecceEEEEEcCCCCchHHHHHHHHhcCCCCcccccccCCe-ECCCEEEEEECCCEEEcC
Confidence 34667766655 69999999999999999999999999764 456 999999999999999999
Q ss_pred cCCCCCCCCCcccCCCcccCCCCccCCCccceeeecccCCCCCcceeEEEeccCcCCCCceeEEEeEeeccccccccccc
Q psy443 175 DFTNHNGTGGKSIYGNKFEDENFTLKHTGPGILSMANAGPNTNGSQFFITTVKTAWLDNRHVVFGSVVEGLDVVKKLESM 254 (403)
Q Consensus 175 d~~~~~g~g~~~~~~~~~~~e~~~~~h~~~G~ls~a~~~~~~~~SqFfI~l~~~~~Ld~~~~VFGrVieG~dvl~~i~~~ 254 (403)
|++.+++.|+.++|+..+++|...++|.++|+||||+++|++++|||||++.++|+||++|+|||||++|||||++|+++
T Consensus 90 d~~~~~G~gg~siyg~~f~dE~~~l~h~~~G~lsMAn~gp~tngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~ 169 (192)
T 2he9_A 90 DFSEGNGKGGESIYGGYFKDENFILKHDRAFLLSMANRGKHTNGSQFFITTKPAPHLDGVHVVFGLVISGFEVIEQIENL 169 (192)
T ss_dssp CTTTSSSSCCCCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTS
T ss_pred cccCCCCCCCCcccCCcccCccccCCCCCCeEEEEEeCCCCCcceEEEEEcCCCcccCCCccEEEEEEeCHHHHHHHHcC
Confidence 99877899999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCC-CCcccceeeecc
Q psy443 255 GSQ-SGKTSKKIVLRS 269 (403)
Q Consensus 255 ~t~-~~~p~~~I~L~~ 269 (403)
++. .++|..+|.|..
T Consensus 170 ~t~~~~~P~~~v~I~~ 185 (192)
T 2he9_A 170 KTDAASRPYADVRVID 185 (192)
T ss_dssp CBCTTSCBSSCEEEEE
T ss_pred CcCCCCCCcCCeEEEE
Confidence 864 478888876543
No 51
>3k2c_A Peptidyl-prolyl CIS-trans isomerase; ssgcid, NIH, niaid, SBRI, UW, decode, cytoplasm, rotamase, structural genomics; HET: PG5; 1.95A {Encephalitozoon cuniculi}
Probab=100.00 E-value=6.9e-39 Score=292.76 Aligned_cols=146 Identities=62% Similarity=1.016 Sum_probs=138.1
Q ss_pred EeeeeEEEEEcCCCChhhHHhHHHhhcCCCCcccCCCEEEeeeCCeEEEeCcCCCCCCCCCcccCCCcccCCCCccCCCc
Q psy443 124 WYRKGFKGRLRSDVVPKTAENFRALCTGEKGFGFKDSTFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTG 203 (403)
Q Consensus 124 T~~G~i~ieL~~d~aP~~~~nF~~L~~g~~g~~Y~~~~f~Rv~~~~~iqgGd~~~~~g~g~~~~~~~~~~~e~~~~~h~~ 203 (403)
|++|+|+||||++.||++|+||++||++++|++|+++.||||+|+||+||||+..+++.|+.++++..+++|...++|++
T Consensus 39 t~~G~I~ieL~~~~aP~tv~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~~f~dE~~~l~h~~ 118 (193)
T 3k2c_A 39 ESLGRIVMKLEDDIVPKTAKNFRTLCERPKGEGYKGSTFHRIIPGFMVQGGDYTAHNGTGGRSIYGEKFPDENFELKHTK 118 (193)
T ss_dssp EEEEEEEEEECTTTSHHHHHHHHHHHHSCTTSSSTTCBEEEEETTTEEEECCTTTSSSSCCCCTTSSCBCCCCCCSCCCS
T ss_pred EEeeEEEEEEcCCCChHHHHHHHHHhccccCCcccCCEEEEEeCCCEEEeCCCCCCCCcCCcccCCCcccccccccccCC
Confidence 78999999999999999999999999887888899999999999999999998888999999999999999999999999
Q ss_pred cceeeecccCCCCCcceeEEEeccCcCCCCceeEEEeEeecccccccccccCCCCCccc--ceeeecc
Q psy443 204 PGILSMANAGPNTNGSQFFITTVKTAWLDNRHVVFGSVVEGLDVVKKLESMGSQSGKTS--KKIVLRS 269 (403)
Q Consensus 204 ~G~ls~a~~~~~~~~SqFfI~l~~~~~Ld~~~~VFGrVieG~dvl~~i~~~~t~~~~p~--~~I~L~~ 269 (403)
+|+||||++++++++|||||++.++++||++|+|||||++|||||++|+++++..++|. .+|.|..
T Consensus 119 ~G~lsmAn~gp~t~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~g~P~~~~~v~I~~ 186 (193)
T 3k2c_A 119 EGILSMANCGAHTNGSQFFITLGKTQWLDEKHVVFGEVVEGMDVVHKIAKYGSESGQVKKGYRIEIRD 186 (193)
T ss_dssp TTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTCCCCTTCCEEEEE
T ss_pred CcEEEEEeCCCCCCccEEEEECCCCcccCCCccEEEEEeCCHHHHHHHHhcCCCCCcCccCccEEEEE
Confidence 99999999999999999999999999999999999999999999999999998878888 7775543
No 52
>4fru_A Cyclophilin B, peptidyl-prolyl CIS-trans isomerase; cyclophilin-type ppiase, peptidyl-prolyl CIS-trans isomerase chaperone, foldase; HET: ME2 PEG; 1.10A {Equus caballus} PDB: 4frv_A* 3ich_A 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=7e-39 Score=291.39 Aligned_cols=146 Identities=61% Similarity=0.970 Sum_probs=136.3
Q ss_pred EeeeeEEEEEcCCCChhhHHhHHHhhcCCCCcccCCCEEEeeeCCeEEEeCcCCCCCCCCCcccCCCcccCCCCccCCCc
Q psy443 124 WYRKGFKGRLRSDVVPKTAENFRALCTGEKGFGFKDSTFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTG 203 (403)
Q Consensus 124 T~~G~i~ieL~~d~aP~~~~nF~~L~~g~~g~~Y~~~~f~Rv~~~~~iqgGd~~~~~g~g~~~~~~~~~~~e~~~~~h~~ 203 (403)
|++|+|+||||++.||+||+||++||++++|++|+++.||||+|+||+||||++.+++.|+.++++..+++|...++|++
T Consensus 24 ~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~~f~de~~~~~h~~ 103 (185)
T 4fru_A 24 EDIGRVVIGLFGKTVPKTVDNFVALATGEKGFGYKDSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYG 103 (185)
T ss_dssp EEEEEEEEEECTTTSHHHHHHHHHHHHTTTSCCSTTCBCCEEETTTEEEECCTTTSSSSCCCBTTBSCBCCCCCCSCCCS
T ss_pred EecceEEEEEeCCCCcHHHHHHHHHHhcCCCCeEcCCEEEEeeCCCeEEECCCCCCCCCCCccccCCccCccccccCcCC
Confidence 46999999999999999999999999887784499999999999999999999988999999999999999999999999
Q ss_pred cceeeecccCCCCCcceeEEEeccCcCCCCceeEEEeEeecccccccccccCCC-CCcccceeeecc
Q psy443 204 PGILSMANAGPNTNGSQFFITTVKTAWLDNRHVVFGSVVEGLDVVKKLESMGSQ-SGKTSKKIVLRS 269 (403)
Q Consensus 204 ~G~ls~a~~~~~~~~SqFfI~l~~~~~Ld~~~~VFGrVieG~dvl~~i~~~~t~-~~~p~~~I~L~~ 269 (403)
+|+||||++++++++|||||++.++++||++|+|||||++||+||++|+++++. .++|..+|.|..
T Consensus 104 ~G~lsma~~gp~t~~SQFfI~~~~~~~Ld~~~~vFG~Vv~G~dvv~~I~~~~t~~~~~P~~~v~I~~ 170 (185)
T 4fru_A 104 PGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVETTKTDGRDKPLKDVTIAD 170 (185)
T ss_dssp TTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSSCEEEEE
T ss_pred CeEEEEeeCCCCCcceEEEEEeCCCcccCCCccEEEEEeCCHHHHHHHHhCCCCCCCcCCCCEEEEE
Confidence 999999999999999999999999999999999999999999999999999875 478888875544
No 53
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=100.00 E-value=3.6e-39 Score=322.86 Aligned_cols=148 Identities=61% Similarity=0.958 Sum_probs=138.2
Q ss_pred CCCCccccee--eeccccCCcchhhHHHhhcCCCCC--------ccCCceEEeecCCeEEEeCcCCCCCCCCCcccCCCC
Q psy443 256 SQSGKTSKKI--VLRSDVVPKTAENFRALCTGEKGF--------GFKDSTFHRVIPNFMCQGGDFTNHNGTGGKSIYGNK 325 (403)
Q Consensus 256 t~~~~p~~~I--~L~~d~aP~t~enF~~L~~g~~g~--------~Y~g~~f~Rvi~~f~iqgGd~~~~~g~gg~~~~g~~ 325 (403)
++++++.|+| +|+.+.+|+||+||+.||++++|+ .|+|+.||||+|+|||||||++.++|+||.++||.+
T Consensus 23 ~~~~~~~G~i~~~l~~~~~P~t~~nf~~l~~~~~~~~~~~g~~~~y~~~~fhrv~~~f~~q~Gd~~~~~g~g~~~~~~~~ 102 (370)
T 1ihg_A 23 DIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEK 102 (370)
T ss_dssp EETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTSSBSCCTTCBEEEEETTTEEEECCTTTSSSSCCCBTTBSC
T ss_pred EECCEecccEEEEEcCCCCchHHHHHHHHcCCCcCcCccCCCcceeCCcEeEEEECCcEEECCCCCCCCCCCCCCCCCCC
Confidence 4556677777 999999999999999999886542 399999999999999999999988999999999999
Q ss_pred CCCCCCCCCCCCCcEEEEecCCCCCCcceEEEEecCCCCCCCCceEEEEEEecHHHHHHHHhCCCCCCCccccEEEeC
Q psy443 326 FEDENFTLKHTGPGILSMANAGPNTNGSQFFITTVKTAWLDNRHVVFGSVVEGLDVVKKLESMGSQSGKTSKKIVCFN 403 (403)
Q Consensus 326 ~~~e~~~~~h~~~G~lsma~~g~~s~gSqFfItl~~~~~Ld~~~~vfG~VieG~dvl~~i~~~~t~~~~P~~~i~I~~ 403 (403)
|++|++.++|+++|+|||||.|||+||||||||+.++||||++|+|||+|++||+||++|+.+++..++|..+|+|.+
T Consensus 103 ~~~e~~~~~~~~~g~l~ma~~~~~~~~sqffi~~~~~~~ld~~~~vfG~v~~g~~v~~~i~~~~~~~~~P~~~v~I~~ 180 (370)
T 1ihg_A 103 FEDENFHYKHDKEGLLSMANAGSNTNGSQFFITTVPTPHLDGKHVVFGQVIKGMGVAKILENVEVKGEKPAKLCVIAE 180 (370)
T ss_dssp BCCCCCCBCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCEETTEESSCEEEEE
T ss_pred cCCCcCCcCCCCCeEEEEeeCCCCCCCceEEEeCCCCcccCCCceEEEEEecCHHHHHHHHcCCCCCCccceeEEEEE
Confidence 999999999999999999999999999999999999999999999999999999999999999998899999999963
No 54
>3bo7_A Peptidyl-prolyl CIS-trans isomerase cyclophilin-T; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, structural G structural genomics consortium, SGC; HET: BMT; 2.35A {Toxoplasma gondii}
Probab=100.00 E-value=7.8e-39 Score=294.47 Aligned_cols=146 Identities=38% Similarity=0.575 Sum_probs=129.5
Q ss_pred eeeEEEEeeeeEEEEEcCCCChhhHHhHHHhhcCCCCcccCCCEEEeeeCCeEEEeC-----cCCCCCCCCCcccC----
Q psy443 118 LANAIHWYRKGFKGRLRSDVVPKTAENFRALCTGEKGFGFKDSTFHRVIPNFMCQGG-----DFTNHNGTGGKSIY---- 188 (403)
Q Consensus 118 ~~v~~~T~~G~i~ieL~~d~aP~~~~nF~~L~~g~~g~~Y~~~~f~Rv~~~~~iqgG-----d~~~~~g~g~~~~~---- 188 (403)
..|+|+|+.|+|+||||++.||+||+||++|| +.|| |+++.||||+|+||+||| |+++ ++.|+.++|
T Consensus 7 ~~v~l~T~~G~i~ieL~~~~aP~t~~NF~~L~--~~g~-Ydg~~FhRvi~~f~iQgG~~~~~Dp~~-~g~gg~si~~~~~ 82 (201)
T 3bo7_A 7 GYLRIVTTQGSLNIELHADMAPRACDSFLRLC--AVKY-FDDTIFHRCIRNFMIQGGRAELRQPSK-KKEVQQSPRSISG 82 (201)
T ss_dssp EEEEEEETTEEEEEEECTTTCHHHHHHHHHHH--HTTT-TTTCBEEEEETTTEEEECCGGGCCC--------CCSSCCCS
T ss_pred eEEEEEeCCCCEEEEEcCCCCcHHHHHHHHHH--hcCc-cCCCEEEEeeCCCEEEcCcccccCCCC-CCCCCcccccccc
Confidence 77999999999999999999999999999999 7899 999999999999999999 9985 888999988
Q ss_pred ---CCcccCCC-CccCCCccceeeecccCCCCCcceeEEEeccCcCCCCceeEEEeEeecccccccccccCCCC-Ccccc
Q psy443 189 ---GNKFEDEN-FTLKHTGPGILSMANAGPNTNGSQFFITTVKTAWLDNRHVVFGSVVEGLDVVKKLESMGSQS-GKTSK 263 (403)
Q Consensus 189 ---~~~~~~e~-~~~~h~~~G~ls~a~~~~~~~~SqFfI~l~~~~~Ld~~~~VFGrVieG~dvl~~i~~~~t~~-~~p~~ 263 (403)
+..+++|. ..++|+++|+||||+++|++++|||||++.++++||++|+|||+|++||+||++|+.+++.. ++|..
T Consensus 83 ~~~g~~f~dE~~~~l~h~~~G~lsmA~~gp~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P~~ 162 (201)
T 3bo7_A 83 FPGGAPFEDEFDNRLVHQGIGVLSMANDGKHSNLSEFFITFKSCEHLNNKHTIFGRVVGGLDVLRQWEKLETDKKDKPLK 162 (201)
T ss_dssp STTCCCBCCCCCTTCCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHTTCCBCTTSCBSS
T ss_pred ccCCCcccCcccCCCCcCCCcEEEEeeCCCCCcccEEEEECCCCcccCCCceEEEEEecCHHHHHHHHhCCcCCCCCcCC
Confidence 88999994 67889899999999999999999999999999999999999999999999999999988653 67776
Q ss_pred eeee
Q psy443 264 KIVL 267 (403)
Q Consensus 264 ~I~L 267 (403)
+|.|
T Consensus 163 ~i~I 166 (201)
T 3bo7_A 163 PPKV 166 (201)
T ss_dssp CCBE
T ss_pred CeEE
Confidence 6644
No 55
>2k7n_A Peptidyl-prolyl CIS-trans isomerase-like 1; beta barrel, disorder-order transition, HOOK-like, mRNA processing, mRNA splicing, rotamase; NMR {Homo sapiens}
Probab=100.00 E-value=4.5e-39 Score=295.20 Aligned_cols=148 Identities=41% Similarity=0.716 Sum_probs=137.0
Q ss_pred eeeEEEEeeeeEEEEEcCCCChhhHHhHHHhhcCCCCcccCCCEEEeeeCCeEEEeCcCCCCCCCCCcccCCCcccCCC-
Q psy443 118 LANAIHWYRKGFKGRLRSDVVPKTAENFRALCTGEKGFGFKDSTFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKFEDEN- 196 (403)
Q Consensus 118 ~~v~~~T~~G~i~ieL~~d~aP~~~~nF~~L~~g~~g~~Y~~~~f~Rv~~~~~iqgGd~~~~~g~g~~~~~~~~~~~e~- 196 (403)
+.|.|+|++|+|+||||++.||++|+||++|| +.|| |+++.||||+|+|||||||++. ++.|+.++|+..+++|.
T Consensus 12 ~~V~l~T~~G~I~ieL~~d~aP~tv~NF~~L~--~~g~-Ydg~~FhRVi~~F~iQgGd~~~-~g~gg~si~g~~f~dE~~ 87 (203)
T 2k7n_A 12 PNVYLETSMGIIVLELYWKHAPKTCKNFAELA--RRGY-YNGTKFHRIIKDFMIQGGDPTG-TGRGGASIYGKQFEDELH 87 (203)
T ss_dssp SEEEEEESSCEEEEEECTTTCTTHHHHHHHHH--HHTC-GGGCEEEEEETTTEEEEECSSS-SSSCCCTTSCSCBCCCCC
T ss_pred CEEEEEeCCCcEEEEEccCCCcHHHHHHHHHH--hcCc-cCCCEEEEEeCCcEEEcCCCCC-CCCCCCccCCCccccccc
Confidence 78999999999999999999999999999999 7889 9999999999999999999986 88899999999999997
Q ss_pred CccCCCccceeeecccCCCCCcceeEEEeccCcCCCCceeEEEeEeecccccccccccCCC-CCcccceeeecc
Q psy443 197 FTLKHTGPGILSMANAGPNTNGSQFFITTVKTAWLDNRHVVFGSVVEGLDVVKKLESMGSQ-SGKTSKKIVLRS 269 (403)
Q Consensus 197 ~~~~h~~~G~ls~a~~~~~~~~SqFfI~l~~~~~Ld~~~~VFGrVieG~dvl~~i~~~~t~-~~~p~~~I~L~~ 269 (403)
..++|.++|+|+||+++|++++|||||++.++++||++|+|||||++|||||++|+.+++. .++|..+|.|..
T Consensus 88 ~~l~h~~~G~lsMAn~gpnsngSQFFIt~~~~~~LDg~~tVFG~VveGmdvv~kI~~~~t~~~~~P~~~V~I~~ 161 (203)
T 2k7n_A 88 PDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQDRPVDDVKIIK 161 (203)
T ss_dssp CSSCCCSSCEEEEEESSTTCEEEEEEEESSCCCSSTTTSCEEEEEESCHHHHHHHHSCCEEETTEECCCCBEEE
T ss_pred ccccCCCCeEEEEeeCCCCCcccEEEEEcCCCCccCCCeeEEEEEEcCHHHHHHHHcCCcCCCCCcCCCeEEEE
Confidence 4789988999999999999999999999999999999999999999999999999998864 357777665544
No 56
>1w74_A Peptidyl-prolyl CIS-trans isomerase A; cyclophilin, ppiase, RV0009, rotamase, structural proteomics in europe, spine; 2.6A {Mycobacterium tuberculosis} SCOP: b.62.1.1
Probab=100.00 E-value=1.3e-38 Score=290.24 Aligned_cols=148 Identities=43% Similarity=0.682 Sum_probs=133.7
Q ss_pred ceeeEEEEeeeeEEEEEcCCCChhhHHhHHHhhcCCC-------------CcccCCCEEEeeeCCeEEEeCcCCCCCCCC
Q psy443 117 SLANAIHWYRKGFKGRLRSDVVPKTAENFRALCTGEK-------------GFGFKDSTFHRVIPNFMCQGGDFTNHNGTG 183 (403)
Q Consensus 117 s~~v~~~T~~G~i~ieL~~d~aP~~~~nF~~L~~g~~-------------g~~Y~~~~f~Rv~~~~~iqgGd~~~~~g~g 183 (403)
.+.|+|+|++|+|+||||++.||+||+||++||+|++ +| |+++.||||+|+|||||||+.. ++.|
T Consensus 23 ~~~v~l~t~~G~I~ieL~~~~aP~tv~NF~~L~tG~~~~~~~~~g~~~~~~~-Y~g~~FhRVi~~fmiQgGd~~g-~G~g 100 (191)
T 1w74_A 23 TATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPF-YDGAVFHRVIQGFMIQGGDPTG-TGRG 100 (191)
T ss_dssp SEEEEEEETTEEEEEEECTTTSHHHHHHHHHHHHTCSCCSSCCTTBSSSSCS-STTEEEEEEETTTEEEECCTTS-SSSC
T ss_pred CeEEEEEecceeEEEEEcCCCChHHHHHHHHHhcCCcccccccccccccCCc-cCCCEEEEEeCCCEEecCCCCC-CCCC
Confidence 3789999999999999999999999999999997643 56 9999999999999999999865 6777
Q ss_pred CcccCCCcccCCC-CccCCCccceeeecccCCCCCcceeEEEeccCcCCCCceeEEEeEee--cccccccccccCCC-CC
Q psy443 184 GKSIYGNKFEDEN-FTLKHTGPGILSMANAGPNTNGSQFFITTVKTAWLDNRHVVFGSVVE--GLDVVKKLESMGSQ-SG 259 (403)
Q Consensus 184 ~~~~~~~~~~~e~-~~~~h~~~G~ls~a~~~~~~~~SqFfI~l~~~~~Ld~~~~VFGrVie--G~dvl~~i~~~~t~-~~ 259 (403)
+ ++..+++|. ..++|.++|+||||+++|++++|||||++.++|+||++|+|||||++ ||+||++|+++++. .+
T Consensus 101 g---~g~~f~dE~~~~l~h~~~G~lsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~~~Gmdvv~~I~~~~t~~~~ 177 (191)
T 1w74_A 101 G---PGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGND 177 (191)
T ss_dssp C---SSCCBCCCCCTTCCSCSSSEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEECSHHHHHHHHHHHTSCBCTTS
T ss_pred C---CCCccccccccCCCcCCCcEEEEeeCCCCCccceEEEEcCCCcccCCCeeEEEEEEECCCHHHHHHHHcCCcCCCC
Confidence 6 478899994 68899999999999999999999999999999999999999999999 99999999999874 47
Q ss_pred cccceeeecc
Q psy443 260 KTSKKIVLRS 269 (403)
Q Consensus 260 ~p~~~I~L~~ 269 (403)
+|..+|.|..
T Consensus 178 ~P~~~v~I~~ 187 (191)
T 1w74_A 178 RPTDPVVIES 187 (191)
T ss_dssp CBSSCCEEEE
T ss_pred CcCCCeEEEE
Confidence 8888776543
No 57
>1mzw_A Cyclophilin H, U-snRNP-ASSOCIATED cyclophilin; cyclophilin, peptidyl-prolyl-CIS/trans isomerase, spliceosome, U4/U6-60K protein, WD protein; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1qoi_A
Probab=100.00 E-value=1e-38 Score=288.07 Aligned_cols=146 Identities=55% Similarity=0.908 Sum_probs=134.3
Q ss_pred EeeeeEEEEEcCCCChhhHHhHHHhhcCCCCc-----ccCCCEEEeeeCCeEEEeCcCCCCCCCCCcccCCCcccCCCCc
Q psy443 124 WYRKGFKGRLRSDVVPKTAENFRALCTGEKGF-----GFKDSTFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKFEDENFT 198 (403)
Q Consensus 124 T~~G~i~ieL~~d~aP~~~~nF~~L~~g~~g~-----~Y~~~~f~Rv~~~~~iqgGd~~~~~g~g~~~~~~~~~~~e~~~ 198 (403)
|+.|+|+||||++.||+||+||++||++..++ +|+++.||||+|+||+||||++.+++.|+.++|+..+++|...
T Consensus 22 t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G~gg~si~g~~f~dE~~~ 101 (177)
T 1mzw_A 22 QEVGRMKIELFADVVPKTAENFRQFCTGEFRKDGVPIGYKGSTFHRVIKDFMIQGGDFVNGDGTGVASIYRGPFADENFK 101 (177)
T ss_dssp EEEEEEEEEECTTTCHHHHHHHHHHHHTCCEETTEECSSTTCBCCEEETTTEEEECCTTTSSSCCCCCTTSSCBCCCCCC
T ss_pred eeceeEEEEEcCCCCcHHHHHHHHHHhcccCCcCccceECCCEEEEEECCCEEEcCCcccCCCCCCCccCCCcccCcccc
Confidence 58999999999999999999999999654421 3999999999999999999998778999999999999999999
Q ss_pred cCCCccceeeecccCCCCCcceeEEEeccCcCCCCceeEEEeEeecccccccccccCC-CCCcccceeeecc
Q psy443 199 LKHTGPGILSMANAGPNTNGSQFFITTVKTAWLDNRHVVFGSVVEGLDVVKKLESMGS-QSGKTSKKIVLRS 269 (403)
Q Consensus 199 ~~h~~~G~ls~a~~~~~~~~SqFfI~l~~~~~Ld~~~~VFGrVieG~dvl~~i~~~~t-~~~~p~~~I~L~~ 269 (403)
++|.++|+||||+++|++++|||||++.++|+||++|+|||||++|||||++|+++++ ..++|..+|.|..
T Consensus 102 l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~VFG~Vv~G~dvv~~I~~~~t~~~~~P~~~v~I~~ 173 (177)
T 1mzw_A 102 LRHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGKHVVFGKIIDGLLVMRKIENVPTGPNNKPKLPVVISQ 173 (177)
T ss_dssp SCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCGGGCBSSCEEEEE
T ss_pred cccCCCCEEEEccCCCCCcceEEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCCCCCCEEEEe
Confidence 9999999999999999999999999999999999999999999999999999999987 5678888876543
No 58
>1lop_A Cyclophilin A; rotamase, isomerase-isomerase inhibitor complex; HET: NIT; 1.80A {Escherichia coli} SCOP: b.62.1.1 PDB: 2nul_A 2rs4_A
Probab=100.00 E-value=4.8e-39 Score=287.22 Aligned_cols=135 Identities=30% Similarity=0.519 Sum_probs=121.1
Q ss_pred ceeeeccccCCcchhhHHHhhcCCCCCccCCceEEeecCCeEEEeCcCCCCCCCCCcccCCCCCCCCCCCCCCCCCcEEE
Q psy443 263 KKIVLRSDVVPKTAENFRALCTGEKGFGFKDSTFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGILS 342 (403)
Q Consensus 263 ~~I~L~~d~aP~t~enF~~L~~g~~g~~Y~g~~f~Rvi~~f~iqgGd~~~~~g~gg~~~~g~~~~~e~~~~~h~~~G~ls 342 (403)
..|+|+.+.+|+|++||++|| +.|| |+|+.||||+|+|||||||++.+. |.++++.+|++|.....++.+|+||
T Consensus 11 i~ieL~~~~aP~t~~NF~~L~--~~g~-Y~g~~FhRvi~~f~iQgGd~~~~~---g~~~~g~~~~dE~~~~l~~~~G~ls 84 (164)
T 1lop_A 11 IVIKTFDDKAPETVKNFLDYC--REGF-YNNTIFHRVINGFMIQGGGFEPGM---KQKATKEPIKNEANNGLKNTRGTLA 84 (164)
T ss_dssp EEEEECTTTSHHHHHHHHHHH--HTTT-TTTEECCEEETTTEEEESSEETTT---EECCCCCCBCCCCCSSCCCCTTEEE
T ss_pred EEEEEeCCCCcHHHHHHHHHH--hcCC-CCCCEEEEEeCCceEecCCcccCC---CcCCCCCccccccccccccCccEEE
Confidence 345999999999999999999 6889 999999999999999999997533 4667899999998754444699999
Q ss_pred EecC-CCCCCcceEEEEecCCCCCCCC--------ceEEEEEEecHHHHHHHHhCCCCC-----CCccccEEEeC
Q psy443 343 MANA-GPNTNGSQFFITTVKTAWLDNR--------HVVFGSVVEGLDVVKKLESMGSQS-----GKTSKKIVCFN 403 (403)
Q Consensus 343 ma~~-g~~s~gSqFfItl~~~~~Ld~~--------~~vfG~VieG~dvl~~i~~~~t~~-----~~P~~~i~I~~ 403 (403)
|||. +|++|+|||||++.++|+||++ |+|||+|++|||||++|+++++++ ++|+++|+|.+
T Consensus 85 mA~~~~p~s~gSQFfI~~~~~~~Ld~~~~~~~~~~~tvFG~Vv~G~dvv~~I~~~~t~~~~~~~~~P~~~v~I~~ 159 (164)
T 1lop_A 85 MARTQAPHSATAQFFINVVDNDFLNFSGESLQGWGYCVFAEVVDGMDEVDKIKGVATGRSGMHQDVPKEDVIIES 159 (164)
T ss_dssp ECCCSSTTCBCSCEEEESSCCGGGSCCSSSTTTSCCCEEEEEEECHHHHHHHHTSCEEEETTEEEEESSCCEEEE
T ss_pred EeecCCCCCccceEEEEcCCccccCCccccccCCceEEEEEEecCHHHHHHHHhCCcCCccccCCCcCCCeEEEE
Confidence 9974 7999999999999999999998 999999999999999999999964 79999999964
No 59
>1v9t_A Cyclophilin B; beta barrel, isomerase-isomerase inhibitor complex; HET: NIT; 1.70A {Escherichia coli} SCOP: b.62.1.1 PDB: 1j2a_A* 1vai_A* 1clh_A
Probab=100.00 E-value=1.4e-38 Score=284.70 Aligned_cols=135 Identities=33% Similarity=0.564 Sum_probs=120.9
Q ss_pred ceeeeccccCCcchhhHHHhhcCCCCCccCCceEEeecCCeEEEeCcCCCCCCCCCcccCCCCCCCCCCCCCCCCCcEEE
Q psy443 263 KKIVLRSDVVPKTAENFRALCTGEKGFGFKDSTFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGILS 342 (403)
Q Consensus 263 ~~I~L~~d~aP~t~enF~~L~~g~~g~~Y~g~~f~Rvi~~f~iqgGd~~~~~g~gg~~~~g~~~~~e~~~~~h~~~G~ls 342 (403)
..|+|+.+.+|+|++||++|| +.|| |+|+.||||+|+|||||||++...+ ...++.+|++|.....|+.+|+||
T Consensus 16 i~ieL~~~~aP~t~~NF~~L~--~~g~-Y~g~~FhRvi~~f~iQgGd~~~~~~---~~~~g~~~~dE~~~~l~~~~G~ls 89 (166)
T 1v9t_A 16 IELELDKQKAPVSVQNFVDYV--NSGF-YNNTTFHRVIPGFMIQGGGFTEQMQ---QKKPNPPIKNEADNGLRNTRGTIA 89 (166)
T ss_dssp EEEEECTTTCHHHHHHHHHHH--HTTT-TTTCBEEEEETTTEEEESSBCTTCC---BCCCCCCBCCCGGGSCCCCTTEEE
T ss_pred EEEEEcCCCCcHHHHHHHHHh--ccCC-CCCCEEEEEECCcEEEcCCcCcCCC---CCCCCCcccccccccccCCceEEE
Confidence 345999999999999999999 7889 9999999999999999999976432 234678899998776677899999
Q ss_pred EecC-CCCCCcceEEEEecCCCCCCCC-----ceEEEEEEecHHHHHHHHhCCCCC-----CCccccEEEeC
Q psy443 343 MANA-GPNTNGSQFFITTVKTAWLDNR-----HVVFGSVVEGLDVVKKLESMGSQS-----GKTSKKIVCFN 403 (403)
Q Consensus 343 ma~~-g~~s~gSqFfItl~~~~~Ld~~-----~~vfG~VieG~dvl~~i~~~~t~~-----~~P~~~i~I~~ 403 (403)
|||. +||+|+|||||++.++|+||++ |+|||+|++|||||++|+++++++ ++|+++|+|.+
T Consensus 90 mA~~~~p~t~gSQFfI~~~~~~~Ld~~~~~~~~tvFG~Vv~G~dvv~~I~~~~~~~~~~~~~~P~~~v~I~~ 161 (166)
T 1v9t_A 90 MARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVADKISQVPTHDVGPYQNVPSKPVVILS 161 (166)
T ss_dssp ECCCSSTTCBCSCEEEESSCCGGGSCCSSCCCCCEEEEEEECHHHHHHHHTSCEEEETTEEEEESSCCBEEE
T ss_pred EeecCCCCCccceEEEEeCCccccCCccCcCCeeEEEEEecCHHHHHHHHhCCCCCCCccCCCcCCCeEEEE
Confidence 9997 6999999999999999999998 999999999999999999999874 79999999863
No 60
>2hq6_A Serologically defined colon cancer antigen 10; protein folding, peptidyl-prolyl CIS-trans isomerase, struct genomics; 1.75A {Homo sapiens}
Probab=100.00 E-value=4.8e-38 Score=285.20 Aligned_cols=136 Identities=39% Similarity=0.686 Sum_probs=125.3
Q ss_pred ceeeeccccCCcchhhHHHhhcCCCCCccCCceEEeecCCeEEEeCcCCCCCCCCCcccCCCCCCCCCC-CCCCCCCcEE
Q psy443 263 KKIVLRSDVVPKTAENFRALCTGEKGFGFKDSTFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKFEDENF-TLKHTGPGIL 341 (403)
Q Consensus 263 ~~I~L~~d~aP~t~enF~~L~~g~~g~~Y~g~~f~Rvi~~f~iqgGd~~~~~g~gg~~~~g~~~~~e~~-~~~h~~~G~l 341 (403)
..|+|+.+.+|++++||++|| +.|| |+|+.||||+|+|||||||+++ ++.||.++||.+|++|.. .++|+++|+|
T Consensus 36 I~ieL~~~~aP~tv~NF~~L~--~~g~-Y~g~~FhRvi~~f~iQgGd~~~-~g~gg~si~g~~~~dE~~~~l~h~~~G~l 111 (185)
T 2hq6_A 36 IDIELWSKEAPKACRNFIQLC--LEAY-YDNTIFHRVVPGFIVQGGDPTG-TGSGGESIYGAPFKDEFHSRLRFNRRGLV 111 (185)
T ss_dssp EEEEEBTTTCHHHHHHHHHHH--HTTT-TTTEECCEEETTTEEEECCTTS-SSSCCCCTTSSCBCCCCBTTBCSCSSSEE
T ss_pred EEEEEeCCCCcHHHHHHHHHh--hcCc-cCCCEEEEEECCCEEEcCCCCC-CCCCCCcccCCccccccccCcccCCCeEE
Confidence 345999999999999999999 6788 9999999999999999999974 788999999999999986 6889999999
Q ss_pred EEecCCCCCCcceEEEEecCCCCCCCCceEEEEEEecHHHH--HHHHhCCCC-CCCccccEEEeC
Q psy443 342 SMANAGPNTNGSQFFITTVKTAWLDNRHVVFGSVVEGLDVV--KKLESMGSQ-SGKTSKKIVCFN 403 (403)
Q Consensus 342 sma~~g~~s~gSqFfItl~~~~~Ld~~~~vfG~VieG~dvl--~~i~~~~t~-~~~P~~~i~I~~ 403 (403)
||||.+|++|+|||||+++++|+||++|+|||||+ ||+++ ++|+.++++ +++|+++|+|.+
T Consensus 112 sMA~~g~~s~gSQFFIt~~~~~~LDg~~tVFG~V~-G~~v~~~~~i~~~~~~~~~~P~~~v~I~~ 175 (185)
T 2hq6_A 112 AMANAGSHDNGSQFFFTLGRADELNNKHTIFGKVT-GDTVYNMLRLSEVDIDDDERPHNPHKIKS 175 (185)
T ss_dssp EECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEC-GGGHHHHHHTTCSCBCTTSCBSSCCEEEE
T ss_pred EEccCCCCCccceEEEECCCCCccCCCceEEEEEE-eCeeehhhHHhhCCcCCCCCCCCCeEEEE
Confidence 99999999999999999999999999999999999 88875 688888885 589999999963
No 61
>3s6m_A Peptidyl-prolyl CIS-trans isomerase; seattle structural genomics center for infectious disease; 1.65A {Burkholderia pseudomallei} SCOP: b.62.1.1 PDB: 3t1u_A*
Probab=100.00 E-value=3.6e-38 Score=282.49 Aligned_cols=135 Identities=31% Similarity=0.486 Sum_probs=120.3
Q ss_pred ceeeeccccCCcchhhHHHhhcCCCCCccCCceEEeecCCeEEEeCcCCCCCCCCCcccCCCCCCCCCCCCCCCCCcEEE
Q psy443 263 KKIVLRSDVVPKTAENFRALCTGEKGFGFKDSTFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGILS 342 (403)
Q Consensus 263 ~~I~L~~d~aP~t~enF~~L~~g~~g~~Y~g~~f~Rvi~~f~iqgGd~~~~~g~gg~~~~g~~~~~e~~~~~h~~~G~ls 342 (403)
..|+|+.+.+|++++||++|| +.+| |+++.||||+|+|||||||++... +...++.++++|.....++.+|+||
T Consensus 15 i~ieL~~~~aP~t~~NF~~L~--~~g~-Y~g~~FhRvi~~f~iQgGd~~~~~---~~~~~~~~~~~E~~~~l~~~~G~ls 88 (167)
T 3s6m_A 15 IKLELDEAKAPKTVENFLNYV--KKGH-YDGTIFHRVINGFMIQGGGFEPGL---KQKPTDAPIANEANNGLKNDTYTIA 88 (167)
T ss_dssp EEEEECTTTCHHHHHHHHHHH--HHTT-TTTEECCEEETTTEEEESSEETTT---EECCCCCCBCCCGGGCCCCCTTEEE
T ss_pred EEEEEeCCCCcHHHHHHHHHh--hhcc-cCCCEeEEecCCcEEEeccccCCC---CCCCCCCccCCcccccccCCccEEE
Confidence 445999999999999999999 6788 999999999999999999997633 2345678899997655556899999
Q ss_pred Eec-CCCCCCcceEEEEecCCCCCCCC--------ceEEEEEEecHHHHHHHHhCCCCC-----CCccccEEEeC
Q psy443 343 MAN-AGPNTNGSQFFITTVKTAWLDNR--------HVVFGSVVEGLDVVKKLESMGSQS-----GKTSKKIVCFN 403 (403)
Q Consensus 343 ma~-~g~~s~gSqFfItl~~~~~Ld~~--------~~vfG~VieG~dvl~~i~~~~t~~-----~~P~~~i~I~~ 403 (403)
||| .+|++|+|||||++.++++||++ |+|||+|++|||||++|+++++++ ++|+++|+|.+
T Consensus 89 mA~~~~p~t~gSQFfI~~~~~~~Ld~~~~~~~~~~~~VFG~Vv~G~dvv~~I~~~~t~~~~~~~~~P~~~v~I~~ 163 (167)
T 3s6m_A 89 MARTNDPHSATAQFFINVNDNEFLNHSSPTPQGWGYAVFGKVVEGQDIVDKIKAVKTGSKGFHQDVPNDDVVIEK 163 (167)
T ss_dssp ECCCSSTTCBCSCEEEESSCCGGGSCCSSSTTTCCCCEEEEEEECHHHHHHHTTSCBBC---CBTCBSSCCEEEE
T ss_pred EecCCCCCCccceEEEEcCCchhcCCcccccCCCCceEEEEEEcCHHHHHHHHcCCcCCCcccCCCcCCCeEEEE
Confidence 999 68999999999999999999998 999999999999999999999975 79999999963
No 62
>1lop_A Cyclophilin A; rotamase, isomerase-isomerase inhibitor complex; HET: NIT; 1.80A {Escherichia coli} SCOP: b.62.1.1 PDB: 2nul_A 2rs4_A
Probab=100.00 E-value=4.3e-38 Score=281.06 Aligned_cols=144 Identities=28% Similarity=0.500 Sum_probs=126.4
Q ss_pred eeEEEEeeeeEEEEEcCCCChhhHHhHHHhhcCCCCcccCCCEEEeeeCCeEEEeCcCCCCCCCCCcccCCCcccCCCCc
Q psy443 119 ANAIHWYRKGFKGRLRSDVVPKTAENFRALCTGEKGFGFKDSTFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKFEDENFT 198 (403)
Q Consensus 119 ~v~~~T~~G~i~ieL~~d~aP~~~~nF~~L~~g~~g~~Y~~~~f~Rv~~~~~iqgGd~~~~~g~g~~~~~~~~~~~e~~~ 198 (403)
.|+|+|++|+|+||||++.||+||+||++|| ++|| |+++.||||+|+|||||||++.+. +.+.++.++++|...
T Consensus 1 ~v~l~T~~G~i~ieL~~~~aP~t~~NF~~L~--~~g~-Y~g~~FhRvi~~f~iQgGd~~~~~---g~~~~g~~~~dE~~~ 74 (164)
T 1lop_A 1 MVTFHTNHGDIVIKTFDDKAPETVKNFLDYC--REGF-YNNTIFHRVINGFMIQGGGFEPGM---KQKATKEPIKNEANN 74 (164)
T ss_dssp CEEEEETTEEEEEEECTTTSHHHHHHHHHHH--HTTT-TTTEECCEEETTTEEEESSEETTT---EECCCCCCBCCCCCS
T ss_pred CEEEEeCCCCEEEEEeCCCCcHHHHHHHHHH--hcCC-CCCCEEEEEeCCceEecCCcccCC---CcCCCCCcccccccc
Confidence 3789999999999999999999999999999 7899 999999999999999999997533 345678899999865
Q ss_pred cCCCccceeeeccc-CCCCCcceeEEEeccCcCCCCc--------eeEEEeEeecccccccccccCCCC-----Ccccce
Q psy443 199 LKHTGPGILSMANA-GPNTNGSQFFITTVKTAWLDNR--------HVVFGSVVEGLDVVKKLESMGSQS-----GKTSKK 264 (403)
Q Consensus 199 ~~h~~~G~ls~a~~-~~~~~~SqFfI~l~~~~~Ld~~--------~~VFGrVieG~dvl~~i~~~~t~~-----~~p~~~ 264 (403)
..++.+|+||||++ +|++++|||||++.++++||++ |+|||+|++|||||++|+++++.. ++|..+
T Consensus 75 ~l~~~~G~lsmA~~~~p~s~gSQFfI~~~~~~~Ld~~~~~~~~~~~tvFG~Vv~G~dvv~~I~~~~t~~~~~~~~~P~~~ 154 (164)
T 1lop_A 75 GLKNTRGTLAMARTQAPHSATAQFFINVVDNDFLNFSGESLQGWGYCVFAEVVDGMDEVDKIKGVATGRSGMHQDVPKED 154 (164)
T ss_dssp SCCCCTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSSTTTSCCCEEEEEEECHHHHHHHHTSCEEEETTEEEEESSC
T ss_pred ccccCccEEEEeecCCCCCccceEEEEcCCccccCCccccccCCceEEEEEEecCHHHHHHHHhCCcCCccccCCCcCCC
Confidence 34446999999974 7999999999999999999997 999999999999999999988643 567766
Q ss_pred eeec
Q psy443 265 IVLR 268 (403)
Q Consensus 265 I~L~ 268 (403)
|.|.
T Consensus 155 v~I~ 158 (164)
T 1lop_A 155 VIIE 158 (164)
T ss_dssp CEEE
T ss_pred eEEE
Confidence 6554
No 63
>1z81_A Cyclophilin; structural genomics, structural genomics consortium, SGC, isomerase; 2.80A {Plasmodium yoelii yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=1.4e-37 Score=290.07 Aligned_cols=146 Identities=53% Similarity=0.909 Sum_probs=134.4
Q ss_pred EeeeeEEEEEcCCCChhhHHhHHHhhcCCCCc-----ccCCCEEEeeeCCeEEEeCcCCCCCCCCCcccCCCcccCCCCc
Q psy443 124 WYRKGFKGRLRSDVVPKTAENFRALCTGEKGF-----GFKDSTFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKFEDENFT 198 (403)
Q Consensus 124 T~~G~i~ieL~~d~aP~~~~nF~~L~~g~~g~-----~Y~~~~f~Rv~~~~~iqgGd~~~~~g~g~~~~~~~~~~~e~~~ 198 (403)
|++|+|+||||++.||+||+||++||++..++ +|+++.||||+|+|||||||++.+++.|+.++|+..|++|...
T Consensus 71 t~~G~I~ieL~~d~aP~tv~NF~~L~~~~~g~~g~~~~Y~gt~FHRVi~~FmiQgGD~~~g~G~Gg~siyg~~f~dE~~~ 150 (229)
T 1z81_A 71 NFLGKFKFELFQNIVPKTSENFRQFCTGEYKVNNLPVGYKNTIFHRVIKEFMIQGGDFINHNGSGSLSIYGEKFDDENFD 150 (229)
T ss_dssp EEEEEEEEEECTTTCHHHHHHHHHHHHTCCBSSSSBCSSTTEECCEEETTTEEEECCTTTSSSCCCCBTTBSCCCCCCCC
T ss_pred eecccEEEEEcCCCCCHHHHHHHHHhhCCCCCcCCCceECCCEEEEEeCCCEEEcCCCcCCCCCCCCccCCCcccccccc
Confidence 45999999999999999999999999765431 3999999999999999999998779999999999999999999
Q ss_pred cCCCccceeeecccCCCCCcceeEEEeccCcCCCCceeEEEeEe--ecccccccccccCCCC--Ccccceeeecc
Q psy443 199 LKHTGPGILSMANAGPNTNGSQFFITTVKTAWLDNRHVVFGSVV--EGLDVVKKLESMGSQS--GKTSKKIVLRS 269 (403)
Q Consensus 199 ~~h~~~G~ls~a~~~~~~~~SqFfI~l~~~~~Ld~~~~VFGrVi--eG~dvl~~i~~~~t~~--~~p~~~I~L~~ 269 (403)
++|.++|+||||+++|++++|||||++.++++||++|+|||||+ +||+||++|+++++.. ++|..+|.|..
T Consensus 151 l~h~~~G~LsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~~eGmdVv~~I~~~~t~~~~~~P~~~V~I~~ 225 (229)
T 1z81_A 151 IKHDKEGLLSMANSGPNTNGCQFFITTKKCEWLDGKNVVFGRIIDNDSLLLLKKIENVSVTPYIYKPKIPINVVE 225 (229)
T ss_dssp SCCCSTTEEEECCSSSSCCCSCEEEESSCCGGGBTTBCEEEEECSHHHHHHHHHHHHSCBCTTTCCBSSCEEEEE
T ss_pred cccCCCcEEEeccCCCCCcccEEEEECCCCcccCCCeeEEEEEEecCcHHHHHHHHhCCCCCCCCCCCCCeEEEe
Confidence 99999999999999999999999999999999999999999999 9999999999998765 78888876643
No 64
>1v9t_A Cyclophilin B; beta barrel, isomerase-isomerase inhibitor complex; HET: NIT; 1.70A {Escherichia coli} SCOP: b.62.1.1 PDB: 1j2a_A* 1vai_A* 1clh_A
Probab=100.00 E-value=9.2e-38 Score=279.43 Aligned_cols=145 Identities=30% Similarity=0.494 Sum_probs=127.2
Q ss_pred eeeEEEEeeeeEEEEEcCCCChhhHHhHHHhhcCCCCcccCCCEEEeeeCCeEEEeCcCCCCCCCCCcccCCCcccCCCC
Q psy443 118 LANAIHWYRKGFKGRLRSDVVPKTAENFRALCTGEKGFGFKDSTFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKFEDENF 197 (403)
Q Consensus 118 ~~v~~~T~~G~i~ieL~~d~aP~~~~nF~~L~~g~~g~~Y~~~~f~Rv~~~~~iqgGd~~~~~g~g~~~~~~~~~~~e~~ 197 (403)
..|.|+|++|+|+||||++.||+||+||++|| ++|| |+++.||||+|+|||||||++...+ ...++.++++|..
T Consensus 5 ~~v~~~t~~G~i~ieL~~~~aP~t~~NF~~L~--~~g~-Y~g~~FhRvi~~f~iQgGd~~~~~~---~~~~g~~~~dE~~ 78 (166)
T 1v9t_A 5 PHVLLTTSAGNIELELDKQKAPVSVQNFVDYV--NSGF-YNNTTFHRVIPGFMIQGGGFTEQMQ---QKKPNPPIKNEAD 78 (166)
T ss_dssp CEEEEEETTEEEEEEECTTTCHHHHHHHHHHH--HTTT-TTTCBEEEEETTTEEEESSBCTTCC---BCCCCCCBCCCGG
T ss_pred eEEEEEeCCccEEEEEcCCCCcHHHHHHHHHh--ccCC-CCCCEEEEEECCcEEEcCCcCcCCC---CCCCCCccccccc
Confidence 67999999999999999999999999999999 7899 9999999999999999999986322 2234678999987
Q ss_pred ccCCCccceeeeccc-CCCCCcceeEEEeccCcCCCCc-----eeEEEeEeecccccccccccCCCC-----Ccccceee
Q psy443 198 TLKHTGPGILSMANA-GPNTNGSQFFITTVKTAWLDNR-----HVVFGSVVEGLDVVKKLESMGSQS-----GKTSKKIV 266 (403)
Q Consensus 198 ~~~h~~~G~ls~a~~-~~~~~~SqFfI~l~~~~~Ld~~-----~~VFGrVieG~dvl~~i~~~~t~~-----~~p~~~I~ 266 (403)
...|+++|+||||++ +|++++|||||++.++++||++ |+|||+|++|||||++|+++++.. +.|..+|.
T Consensus 79 ~~l~~~~G~lsmA~~~~p~t~gSQFfI~~~~~~~Ld~~~~~~~~tvFG~Vv~G~dvv~~I~~~~~~~~~~~~~~P~~~v~ 158 (166)
T 1v9t_A 79 NGLRNTRGTIAMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVADKISQVPTHDVGPYQNVPSKPVV 158 (166)
T ss_dssp GSCCCCTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSCCCCCEEEEEEECHHHHHHHHTSCEEEETTEEEEESSCCB
T ss_pred ccccCCceEEEEeecCCCCCccceEEEEeCCccccCCccCcCCeeEEEEEecCHHHHHHHHhCCCCCCCccCCCcCCCeE
Confidence 666777999999997 6999999999999999999998 999999999999999999988643 45666664
Q ss_pred ec
Q psy443 267 LR 268 (403)
Q Consensus 267 L~ 268 (403)
|.
T Consensus 159 I~ 160 (166)
T 1v9t_A 159 IL 160 (166)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 65
>3s6m_A Peptidyl-prolyl CIS-trans isomerase; seattle structural genomics center for infectious disease; 1.65A {Burkholderia pseudomallei} SCOP: b.62.1.1 PDB: 3t1u_A*
Probab=100.00 E-value=9e-38 Score=279.90 Aligned_cols=146 Identities=29% Similarity=0.451 Sum_probs=128.4
Q ss_pred eeeEEEEeeeeEEEEEcCCCChhhHHhHHHhhcCCCCcccCCCEEEeeeCCeEEEeCcCCCCCCCCCcccCCCcccCCCC
Q psy443 118 LANAIHWYRKGFKGRLRSDVVPKTAENFRALCTGEKGFGFKDSTFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKFEDENF 197 (403)
Q Consensus 118 ~~v~~~T~~G~i~ieL~~d~aP~~~~nF~~L~~g~~g~~Y~~~~f~Rv~~~~~iqgGd~~~~~g~g~~~~~~~~~~~e~~ 197 (403)
+.|+|+|++|+|+||||++.||+||+||++|| +.+| |+++.||||+|+|||||||++... +...++.++++|..
T Consensus 4 ~~v~l~T~~G~i~ieL~~~~aP~t~~NF~~L~--~~g~-Y~g~~FhRvi~~f~iQgGd~~~~~---~~~~~~~~~~~E~~ 77 (167)
T 3s6m_A 4 SMVELHTNHGVIKLELDEAKAPKTVENFLNYV--KKGH-YDGTIFHRVINGFMIQGGGFEPGL---KQKPTDAPIANEAN 77 (167)
T ss_dssp CEEEEEETTEEEEEEECTTTCHHHHHHHHHHH--HHTT-TTTEECCEEETTTEEEESSEETTT---EECCCCCCBCCCGG
T ss_pred cEEEEEeCCceEEEEEeCCCCcHHHHHHHHHh--hhcc-cCCCEeEEecCCcEEEeccccCCC---CCCCCCCccCCccc
Confidence 78999999999999999999999999999999 7889 999999999999999999997632 22345677888865
Q ss_pred ccCCCccceeeecc-cCCCCCcceeEEEeccCcCCCCc--------eeEEEeEeecccccccccccCCCC-----Ccccc
Q psy443 198 TLKHTGPGILSMAN-AGPNTNGSQFFITTVKTAWLDNR--------HVVFGSVVEGLDVVKKLESMGSQS-----GKTSK 263 (403)
Q Consensus 198 ~~~h~~~G~ls~a~-~~~~~~~SqFfI~l~~~~~Ld~~--------~~VFGrVieG~dvl~~i~~~~t~~-----~~p~~ 263 (403)
...++.+|+||||+ .+|++++|||||++.++++||++ |+|||||++|||||++|+++++.. ++|..
T Consensus 78 ~~l~~~~G~lsmA~~~~p~t~gSQFfI~~~~~~~Ld~~~~~~~~~~~~VFG~Vv~G~dvv~~I~~~~t~~~~~~~~~P~~ 157 (167)
T 3s6m_A 78 NGLKNDTYTIAMARTNDPHSATAQFFINVNDNEFLNHSSPTPQGWGYAVFGKVVEGQDIVDKIKAVKTGSKGFHQDVPND 157 (167)
T ss_dssp GCCCCCTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSSTTTCCCCEEEEEEECHHHHHHHTTSCBBC---CBTCBSS
T ss_pred ccccCCccEEEEecCCCCCCccceEEEEcCCchhcCCcccccCCCCceEEEEEEcCHHHHHHHHcCCcCCCcccCCCcCC
Confidence 54555799999999 67999999999999999999998 999999999999999999988753 67887
Q ss_pred eeeecc
Q psy443 264 KIVLRS 269 (403)
Q Consensus 264 ~I~L~~ 269 (403)
+|.|.+
T Consensus 158 ~v~I~~ 163 (167)
T 3s6m_A 158 DVVIEK 163 (167)
T ss_dssp CCEEEE
T ss_pred CeEEEE
Confidence 776543
No 66
>2hq6_A Serologically defined colon cancer antigen 10; protein folding, peptidyl-prolyl CIS-trans isomerase, struct genomics; 1.75A {Homo sapiens}
Probab=100.00 E-value=5.3e-37 Score=278.33 Aligned_cols=146 Identities=36% Similarity=0.626 Sum_probs=132.9
Q ss_pred eeeEEEEeeeeEEEEEcCCCChhhHHhHHHhhcCCCCcccCCCEEEeeeCCeEEEeCcCCCCCCCCCcccCCCcccCCCC
Q psy443 118 LANAIHWYRKGFKGRLRSDVVPKTAENFRALCTGEKGFGFKDSTFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKFEDENF 197 (403)
Q Consensus 118 ~~v~~~T~~G~i~ieL~~d~aP~~~~nF~~L~~g~~g~~Y~~~~f~Rv~~~~~iqgGd~~~~~g~g~~~~~~~~~~~e~~ 197 (403)
..|.|+|++|+|+||||++.||++|+||++|| +.|| |+++.||||+|+|||||||++. ++.|+.++|+..+++|..
T Consensus 25 ~~V~l~T~~G~I~ieL~~~~aP~tv~NF~~L~--~~g~-Y~g~~FhRvi~~f~iQgGd~~~-~g~gg~si~g~~~~dE~~ 100 (185)
T 2hq6_A 25 GKVLLKTTAGDIDIELWSKEAPKACRNFIQLC--LEAY-YDNTIFHRVVPGFIVQGGDPTG-TGSGGESIYGAPFKDEFH 100 (185)
T ss_dssp CEEEEEETTEEEEEEEBTTTCHHHHHHHHHHH--HTTT-TTTEECCEEETTTEEEECCTTS-SSSCCCCTTSSCBCCCCB
T ss_pred CEEEEEeCCccEEEEEeCCCCcHHHHHHHHHh--hcCc-cCCCEEEEEECCCEEEcCCCCC-CCCCCCcccCCccccccc
Confidence 56999999999999999999999999999999 7789 9999999999999999999985 889999999999999975
Q ss_pred -ccCCCccceeeecccCCCCCcceeEEEeccCcCCCCceeEEEeEeeccccc--ccccccCC-CCCcccceeeec
Q psy443 198 -TLKHTGPGILSMANAGPNTNGSQFFITTVKTAWLDNRHVVFGSVVEGLDVV--KKLESMGS-QSGKTSKKIVLR 268 (403)
Q Consensus 198 -~~~h~~~G~ls~a~~~~~~~~SqFfI~l~~~~~Ld~~~~VFGrVieG~dvl--~~i~~~~t-~~~~p~~~I~L~ 268 (403)
.++|+++|+||||++++++++|||||++.++++||++|+|||||+ ||+++ ++|+.+++ ..++|..+|.|.
T Consensus 101 ~~l~h~~~G~lsMA~~g~~s~gSQFFIt~~~~~~LDg~~tVFG~V~-G~~v~~~~~i~~~~~~~~~~P~~~v~I~ 174 (185)
T 2hq6_A 101 SRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKVT-GDTVYNMLRLSEVDIDDDERPHNPHKIK 174 (185)
T ss_dssp TTBCSCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEC-GGGHHHHHHTTCSCBCTTSCBSSCCEEE
T ss_pred cCcccCCCeEEEEccCCCCCccceEEEECCCCCccCCCceEEEEEE-eCeeehhhHHhhCCcCCCCCCCCCeEEE
Confidence 688999999999999999999999999999999999999999999 89875 57877765 456777776543
No 67
>2ose_A Probable peptidyl-prolyl CIS-trans isomerase; cyclophilin; 2.04A {Mimivirus}
Probab=100.00 E-value=4.2e-37 Score=288.51 Aligned_cols=144 Identities=29% Similarity=0.444 Sum_probs=126.5
Q ss_pred EeeeeEEEEEcCCCChhhHHhHHHhhcCC-----------C----C--cccCCCEEEeeeCCeEEEeCcCCCCCCCCCcc
Q psy443 124 WYRKGFKGRLRSDVVPKTAENFRALCTGE-----------K----G--FGFKDSTFHRVIPNFMCQGGDFTNHNGTGGKS 186 (403)
Q Consensus 124 T~~G~i~ieL~~d~aP~~~~nF~~L~~g~-----------~----g--~~Y~~~~f~Rv~~~~~iqgGd~~~~~g~g~~~ 186 (403)
|++|+|+||||++.||+||+||++||+|+ . | |+|+++.||||+|+|||||||+..++|.|+.+
T Consensus 26 t~~G~I~ieL~~d~aP~tv~NF~~L~~g~~~~~~p~~~~~~~~~~G~~~~Y~gt~FHRVi~~FmiQgGd~~~g~G~Gg~s 105 (234)
T 2ose_A 26 EIIGRLQIKLFRDAFPAGVENFVQLTNGKTYRVNSNGTGKYKYNRHINRTYEGCKFHNVLHNNYIVSGDIYNSNGSSAGT 105 (234)
T ss_dssp EEEEEEEEEECGGGCHHHHHHHHHHHHTCCCC---------------CCCSTTCBCCEEETTTEEEECCCC----CCCCC
T ss_pred cccceEEEEEcCCCCcHHHHHHHHHhcCCccccccccccccccccCCceEECCcEEEEEECCCEEEcCCccCCCCCCCcc
Confidence 99999999999999999999999999875 4 5 66999999999999999999977778999999
Q ss_pred cCCCc-----ccCCCCccCCCccceeeecc----cCCCCCcceeEEEecc------CcCCCCceeEEEeEeecccccccc
Q psy443 187 IYGNK-----FEDENFTLKHTGPGILSMAN----AGPNTNGSQFFITTVK------TAWLDNRHVVFGSVVEGLDVVKKL 251 (403)
Q Consensus 187 ~~~~~-----~~~e~~~~~h~~~G~ls~a~----~~~~~~~SqFfI~l~~------~~~Ld~~~~VFGrVieG~dvl~~i 251 (403)
+||.. |+ ...++|.++|+||||+ ++|++++|||||++.+ +++||++|+|||+|++|||||++|
T Consensus 106 iyg~~~~p~~f~--~~~l~h~~~G~lsMAn~~~~~gpntngSQFFIt~~~~~~~~g~p~LDg~~tVFG~Vv~GmdVv~~I 183 (234)
T 2ose_A 106 VYCDEPIPPVFG--DYFYPHESKGLLSLVPYTDESGNRYYDSTFMITLDDIRPSNVLDELDRDQVVIGQVYGGLDVLDKI 183 (234)
T ss_dssp TTTTCCBCCCCC--SCCCCSCSTTEEEECCEECTTSCEEBCSCEEEESSCCCTTSSGGGSCTTSEEEEEEEECHHHHHHH
T ss_pred ccCCccCccccc--CcCccCCCCCEEEEecccccCCCCCccceEEEEecCccccCCCcccCCCeeEEEEEeCCHHHHHHH
Confidence 99887 66 4578998999999999 8999999999999999 999999999999999999999999
Q ss_pred cccCCCC-Ccccceeeecc
Q psy443 252 ESMGSQS-GKTSKKIVLRS 269 (403)
Q Consensus 252 ~~~~t~~-~~p~~~I~L~~ 269 (403)
+.+++.. ++|..+|.|..
T Consensus 184 ~~~~t~~~~~P~~~V~I~~ 202 (234)
T 2ose_A 184 NSMIKPYAGRKYPTFSIGK 202 (234)
T ss_dssp HHHTCCCTTCCCCCEEEEE
T ss_pred HhCCcCCCCCccCCEEEEE
Confidence 9998754 78887775543
No 68
>3bkp_A Cyclophilin; malaria, isomerase, structural GENO structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=4.7e-37 Score=287.67 Aligned_cols=136 Identities=32% Similarity=0.579 Sum_probs=123.7
Q ss_pred ceeeeccccCCcchhhHHHhhcCCCCCccCCceEEeecCCeEEEeCcCCCCCCCCCcccC--CCCCCCCCC-CCCCCCCc
Q psy443 263 KKIVLRSDVVPKTAENFRALCTGEKGFGFKDSTFHRVIPNFMCQGGDFTNHNGTGGKSIY--GNKFEDENF-TLKHTGPG 339 (403)
Q Consensus 263 ~~I~L~~d~aP~t~enF~~L~~g~~g~~Y~g~~f~Rvi~~f~iqgGd~~~~~g~gg~~~~--g~~~~~e~~-~~~h~~~G 339 (403)
..|+|+.+.+|++++||+.|| +.|| |+|+.||||+|+|||||||+++ +|.||.++| |.+|++|.. .++|+++|
T Consensus 33 I~ieL~~d~aP~tv~NF~~L~--~~g~-Ydgt~FhRVi~~FmiQgGdp~~-~G~Gg~si~~~g~~f~dE~~~~l~h~~~G 108 (232)
T 3bkp_A 33 LDVELWARECPLACRNFVQLC--LEGY-YVNTIFHRVVKDFIVQGGDPTG-TGRGGADTTFDGKPFDVETHPRLKFRYRG 108 (232)
T ss_dssp EEEEEBTTTCHHHHHHHHHHH--HHTT-TTTCBEEEEETTTEEEECCTTS-SSSCCCCCTTTTCCBCCCCCTTCCCCSTT
T ss_pred EEEEEcCCCCcHHHHHHHHHh--hcCc-cCCCEEEEEeCCCEEEcCCCCC-CCCCCCccccCCCccCCccccCcCcCCCe
Confidence 345999999999999999999 6788 9999999999999999999985 889999999 899999986 68899999
Q ss_pred EEEEecCCC--------------CCCcceEEEEecCCCCCCCCceEEEEEEecHHH--HHHHHhCCCC-CCCccccEEEe
Q psy443 340 ILSMANAGP--------------NTNGSQFFITTVKTAWLDNRHVVFGSVVEGLDV--VKKLESMGSQ-SGKTSKKIVCF 402 (403)
Q Consensus 340 ~lsma~~g~--------------~s~gSqFfItl~~~~~Ld~~~~vfG~VieG~dv--l~~i~~~~t~-~~~P~~~i~I~ 402 (403)
+|||||.++ ++|+||||||++++|+||++|+|||+|+ ||+| |++|+.++++ +++|+++|+|.
T Consensus 109 ~lsMA~~g~~~~~~~n~e~g~~~~sngSQFFIt~~~~p~LDg~~tVFG~Vv-g~~v~~v~kI~~~~t~~~~~P~~~i~I~ 187 (232)
T 3bkp_A 109 LVGVANLGRSSKDAENDERGRSLGTNGNQFFITLARADVLNNAYTLFGKVT-GHTLYNLMKFNDLEVGKEDRPMTPPFIK 187 (232)
T ss_dssp EEEECCCC----------------CBCSCEEEESSCCGGGTTTSCEEEEEC-GGGHHHHHHHTTSCBCGGGCBSSCCBEE
T ss_pred EEEEeccCCcccccccccccccCCCcCCEEEEECCCCcccCCCccEEEEEE-eCchHHHHHHHcCCcCCCCCcCCCeEEE
Confidence 999999997 6999999999999999999999999999 7766 8999999996 58999999986
Q ss_pred C
Q psy443 403 N 403 (403)
Q Consensus 403 ~ 403 (403)
+
T Consensus 188 ~ 188 (232)
T 3bkp_A 188 S 188 (232)
T ss_dssp E
T ss_pred E
Confidence 3
No 69
>3bkp_A Cyclophilin; malaria, isomerase, structural GENO structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=3.3e-36 Score=281.96 Aligned_cols=147 Identities=31% Similarity=0.552 Sum_probs=131.3
Q ss_pred eeeEEEEeeeeEEEEEcCCCChhhHHhHHHhhcCCCCcccCCCEEEeeeCCeEEEeCcCCCCCCCCCcccC--CCcccCC
Q psy443 118 LANAIHWYRKGFKGRLRSDVVPKTAENFRALCTGEKGFGFKDSTFHRVIPNFMCQGGDFTNHNGTGGKSIY--GNKFEDE 195 (403)
Q Consensus 118 ~~v~~~T~~G~i~ieL~~d~aP~~~~nF~~L~~g~~g~~Y~~~~f~Rv~~~~~iqgGd~~~~~g~g~~~~~--~~~~~~e 195 (403)
..|.|+|++|+|+||||++.||+||+||++|| +.|| |+++.||||+|+|||||||++. ++.|+.++| +..+++|
T Consensus 22 ~~V~l~T~~G~I~ieL~~d~aP~tv~NF~~L~--~~g~-Ydgt~FhRVi~~FmiQgGdp~~-~G~Gg~si~~~g~~f~dE 97 (232)
T 3bkp_A 22 GKVVLHTSLGDLDVELWARECPLACRNFVQLC--LEGY-YVNTIFHRVVKDFIVQGGDPTG-TGRGGADTTFDGKPFDVE 97 (232)
T ss_dssp CEEEEEETTEEEEEEEBTTTCHHHHHHHHHHH--HHTT-TTTCBEEEEETTTEEEECCTTS-SSSCCCCCTTTTCCBCCC
T ss_pred CEEEEEECCCcEEEEEcCCCCcHHHHHHHHHh--hcCc-cCCCEEEEEeCCCEEEcCCCCC-CCCCCCccccCCCccCCc
Confidence 67999999999999999999999999999999 7789 9999999999999999999986 899999998 8999999
Q ss_pred CC-ccCCCccceeeecccCC--------------CCCcceeEEEeccCcCCCCceeEEEeEeecccc--cccccccCC-C
Q psy443 196 NF-TLKHTGPGILSMANAGP--------------NTNGSQFFITTVKTAWLDNRHVVFGSVVEGLDV--VKKLESMGS-Q 257 (403)
Q Consensus 196 ~~-~~~h~~~G~ls~a~~~~--------------~~~~SqFfI~l~~~~~Ld~~~~VFGrVieG~dv--l~~i~~~~t-~ 257 (403)
.. .++|+.+|+||||++++ ++++|||||++.++|+||++|+|||+|+ ||++ |++|+.+++ .
T Consensus 98 ~~~~l~h~~~G~lsMA~~g~~~~~~~n~e~g~~~~sngSQFFIt~~~~p~LDg~~tVFG~Vv-g~~v~~v~kI~~~~t~~ 176 (232)
T 3bkp_A 98 THPRLKFRYRGLVGVANLGRSSKDAENDERGRSLGTNGNQFFITLARADVLNNAYTLFGKVT-GHTLYNLMKFNDLEVGK 176 (232)
T ss_dssp CCTTCCCCSTTEEEECCCC----------------CBCSCEEEESSCCGGGTTTSCEEEEEC-GGGHHHHHHHTTSCBCG
T ss_pred cccCcCcCCCeEEEEeccCCcccccccccccccCCCcCCEEEEECCCCcccCCCccEEEEEE-eCchHHHHHHHcCCcCC
Confidence 75 68899999999999987 6999999999999999999999999999 7877 889998876 3
Q ss_pred CCcccceeeecc
Q psy443 258 SGKTSKKIVLRS 269 (403)
Q Consensus 258 ~~~p~~~I~L~~ 269 (403)
.++|..+|.|..
T Consensus 177 ~~~P~~~i~I~~ 188 (232)
T 3bkp_A 177 EDRPMTPPFIKS 188 (232)
T ss_dssp GGCBSSCCBEEE
T ss_pred CCCcCCCeEEEE
Confidence 556766664433
No 70
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=100.00 E-value=5.9e-36 Score=299.49 Aligned_cols=152 Identities=58% Similarity=0.879 Sum_probs=138.6
Q ss_pred eeeEEEEe-----eeeEEEEEcCCCChhhHHhHHHhhcCCCCc--------ccCCCEEEeeeCCeEEEeCcCCCCCCCCC
Q psy443 118 LANAIHWY-----RKGFKGRLRSDVVPKTAENFRALCTGEKGF--------GFKDSTFHRVIPNFMCQGGDFTNHNGTGG 184 (403)
Q Consensus 118 ~~v~~~T~-----~G~i~ieL~~d~aP~~~~nF~~L~~g~~g~--------~Y~~~~f~Rv~~~~~iqgGd~~~~~g~g~ 184 (403)
..|.|+|+ .|+|+||||++.||+||+||++||++++|+ .|+++.||||+|+|||||||++.++|.|+
T Consensus 16 ~~v~~~~~~~~~~~G~i~~~l~~~~~P~t~~nf~~l~~~~~~~~~~~g~~~~y~~~~fhrv~~~f~~q~Gd~~~~~g~g~ 95 (370)
T 1ihg_A 16 PRVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGG 95 (370)
T ss_dssp CEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTSSBSCCTTCBEEEEETTTEEEECCTTTSSSSCC
T ss_pred CeEEEEEEECCEecccEEEEEcCCCCchHHHHHHHHcCCCcCcCccCCCcceeCCcEeEEEECCcEEECCCCCCCCCCCC
Confidence 45777777 899999999999999999999999875542 29999999999999999999997799999
Q ss_pred cccCCCcccCCCCccCCCccceeeecccCCCCCcceeEEEeccCcCCCCceeEEEeEeecccccccccccCCCCCcccce
Q psy443 185 KSIYGNKFEDENFTLKHTGPGILSMANAGPNTNGSQFFITTVKTAWLDNRHVVFGSVVEGLDVVKKLESMGSQSGKTSKK 264 (403)
Q Consensus 185 ~~~~~~~~~~e~~~~~h~~~G~ls~a~~~~~~~~SqFfI~l~~~~~Ld~~~~VFGrVieG~dvl~~i~~~~t~~~~p~~~ 264 (403)
.+++|..|++|...++|+++|+||||+++|++++|||||++.++|+||++|+|||+|++||+||++|+..++..++|..+
T Consensus 96 ~~~~~~~~~~e~~~~~~~~~g~l~ma~~~~~~~~sqffi~~~~~~~ld~~~~vfG~v~~g~~v~~~i~~~~~~~~~P~~~ 175 (370)
T 1ihg_A 96 ESIYGEKFEDENFHYKHDKEGLLSMANAGSNTNGSQFFITTVPTPHLDGKHVVFGQVIKGMGVAKILENVEVKGEKPAKL 175 (370)
T ss_dssp CBTTBSCBCCCCCCBCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCEETTEESSC
T ss_pred CCCCCCCcCCCcCCcCCCCCeEEEEeeCCCCCCCceEEEeCCCCcccCCCceEEEEEecCHHHHHHHHcCCCCCCcccee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988665777776
Q ss_pred eeecc
Q psy443 265 IVLRS 269 (403)
Q Consensus 265 I~L~~ 269 (403)
|.|..
T Consensus 176 v~I~~ 180 (370)
T 1ihg_A 176 CVIAE 180 (370)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 65443
No 71
>3rfy_A Peptidyl-prolyl CIS-trans isomerase CYP38, chloro; cyclophilin, peptidyl prolyl isomerase, ppiase, TLP,; 2.39A {Arabidopsis thaliana}
Probab=100.00 E-value=1.3e-32 Score=271.82 Aligned_cols=132 Identities=26% Similarity=0.367 Sum_probs=117.9
Q ss_pred eeeEEEEe--------eeeEEEEEcCCCChhhHHhHHHhhcCCCCcccCCCEEEeeeCCeEEEeCcCCCCCCCC------
Q psy443 118 LANAIHWY--------RKGFKGRLRSDVVPKTAENFRALCTGEKGFGFKDSTFHRVIPNFMCQGGDFTNHNGTG------ 183 (403)
Q Consensus 118 ~~v~~~T~--------~G~i~ieL~~d~aP~~~~nF~~L~~g~~g~~Y~~~~f~Rv~~~~~iqgGd~~~~~g~g------ 183 (403)
..|.++|+ .|+|+||||++.||+||+||++|| +.|| |+++.|||| ++|||||||+++ ++.|
T Consensus 171 a~V~m~t~~~~~~~~~~G~I~IeL~~d~AP~Tv~NFl~L~--~~Gf-YdGt~FHRV-~gFmIQgGDp~g-~G~G~~~~~~ 245 (369)
T 3rfy_A 171 ASVDMKVKIKDNPNIEDCVFRIVLDGYNAPVTAGNFVDLV--ERHF-YDGMEIQRS-DGFVVQTGDPEG-PAEGFIDPST 245 (369)
T ss_dssp EEEEEEEECCSCSSCSEEEEEEEEETTTCHHHHHHHHHHH--HTTT-TTTEECEEE-EEEEECCCCCCC-CCSCCCSCCC
T ss_pred eEEEEEEeccCCCcccceEEEEEEeCCCCcHHHHHHHHHh--hcCC-cCCCeeeee-CCeeEecCCCCC-CCCCccCccc
Confidence 78899997 999999999999999999999999 7899 999999999 999999999986 5555
Q ss_pred ---------------CcccCCCcccCCC-----CccCCCccceeeeccc--CCCCCcceeEEEec-------cCcCCCCc
Q psy443 184 ---------------GKSIYGNKFEDEN-----FTLKHTGPGILSMANA--GPNTNGSQFFITTV-------KTAWLDNR 234 (403)
Q Consensus 184 ---------------~~~~~~~~~~~e~-----~~~~h~~~G~ls~a~~--~~~~~~SqFfI~l~-------~~~~Ld~~ 234 (403)
+.++|+..++++. ..++|+++|+||||++ +||+++|||||++. +.++||++
T Consensus 246 g~~~~iP~E~~~~G~g~piyg~~fedegf~~~~~~L~h~~~G~LsMAns~~gPnSngSQFFItl~d~~L~~~~~~~LDgk 325 (369)
T 3rfy_A 246 EKTRTVPLEIMVTGEKTPFYGSTLEELGLYKAQVVIPFNAFGTMAMAREEFENDSGSSQVFWLLKESELTPSNSNILDGR 325 (369)
T ss_dssp CCCCSSSSSSCSSSSCCSCCCSSTGGGTEEEEEEEECCCCCCCCCCSSCCCCCCCSSCCCCCCCEEEEECSCCCSSSCSC
T ss_pred CcCcccCccccccCCCCCcCCCccccccccccccccccCCCceEEEeecCCCCCCccceEEEEecccccCCCCCcccCCC
Confidence 3455666666663 3688999999999998 89999999999994 68999999
Q ss_pred eeEEEeEeeccccccccccc
Q psy443 235 HVVFGSVVEGLDVVKKLESM 254 (403)
Q Consensus 235 ~~VFGrVieG~dvl~~i~~~ 254 (403)
|+|||+|++|||||++|++.
T Consensus 326 ytVFG~VveGmdVVdkI~~G 345 (369)
T 3rfy_A 326 YAVFGYVTDNEDFLADLKVG 345 (369)
T ss_dssp EEEEEEEEESTTGGGGCCTT
T ss_pred eeEEEEEecCHHHHHHHhCC
Confidence 99999999999999999874
No 72
>3rfy_A Peptidyl-prolyl CIS-trans isomerase CYP38, chloro; cyclophilin, peptidyl prolyl isomerase, ppiase, TLP,; 2.39A {Arabidopsis thaliana}
Probab=99.98 E-value=1.7e-33 Score=278.15 Aligned_cols=130 Identities=28% Similarity=0.448 Sum_probs=114.0
Q ss_pred ceeeeccccCCcchhhHHHhhcCCCCCccCCceEEeecCCeEEEeCcCCCCCCCC---------------------Cccc
Q psy443 263 KKIVLRSDVVPKTAENFRALCTGEKGFGFKDSTFHRVIPNFMCQGGDFTNHNGTG---------------------GKSI 321 (403)
Q Consensus 263 ~~I~L~~d~aP~t~enF~~L~~g~~g~~Y~g~~f~Rvi~~f~iqgGd~~~~~g~g---------------------g~~~ 321 (403)
..|+|+.+.+|+||+||+.|| +.|| |+|+.|||| ++|||||||+++ ++.| +.++
T Consensus 190 I~IeL~~d~AP~Tv~NFl~L~--~~Gf-YdGt~FHRV-~gFmIQgGDp~g-~G~G~~~~~~g~~~~iP~E~~~~G~g~pi 264 (369)
T 3rfy_A 190 FRIVLDGYNAPVTAGNFVDLV--ERHF-YDGMEIQRS-DGFVVQTGDPEG-PAEGFIDPSTEKTRTVPLEIMVTGEKTPF 264 (369)
T ss_dssp EEEEEETTTCHHHHHHHHHHH--HTTT-TTTEECEEE-EEEEECCCCCCC-CCSCCCSCCCCCCCSSSSSSCSSSSCCSC
T ss_pred EEEEEeCCCCcHHHHHHHHHh--hcCC-cCCCeeeee-CCeeEecCCCCC-CCCCccCcccCcCcccCccccccCCCCCc
Confidence 344999999999999999999 7899 999999999 999999999985 4444 4577
Q ss_pred CCCCCCCCCC-----CCCCCCCcEEEEecC--CCCCCcceEEEEe-------cCCCCCCCCceEEEEEEecHHHHHHHHh
Q psy443 322 YGNKFEDENF-----TLKHTGPGILSMANA--GPNTNGSQFFITT-------VKTAWLDNRHVVFGSVVEGLDVVKKLES 387 (403)
Q Consensus 322 ~g~~~~~e~~-----~~~h~~~G~lsma~~--g~~s~gSqFfItl-------~~~~~Ld~~~~vfG~VieG~dvl~~i~~ 387 (403)
|+..|++|++ .++|+.+|+|||||. +||+|+|||||++ .++++||++|+|||+|++|||||++|++
T Consensus 265 yg~~fedegf~~~~~~L~h~~~G~LsMAns~~gPnSngSQFFItl~d~~L~~~~~~~LDgkytVFG~VveGmdVVdkI~~ 344 (369)
T 3rfy_A 265 YGSTLEELGLYKAQVVIPFNAFGTMAMAREEFENDSGSSQVFWLLKESELTPSNSNILDGRYAVFGYVTDNEDFLADLKV 344 (369)
T ss_dssp CCSSTGGGTEEEEEEEECCCCCCCCCCSSCCCCCCCSSCCCCCCCEEEEECSCCCSSSCSCEEEEEEEEESTTGGGGCCT
T ss_pred CCCccccccccccccccccCCCceEEEeecCCCCCCccceEEEEecccccCCCCCcccCCCeeEEEEEecCHHHHHHHhC
Confidence 8888888754 688999999999998 8999999999999 4689999999999999999999999987
Q ss_pred CCCCCCCccccEEEe
Q psy443 388 MGSQSGKTSKKIVCF 402 (403)
Q Consensus 388 ~~t~~~~P~~~i~I~ 402 (403)
+.++.+|+|+
T Consensus 345 -----GD~I~sv~I~ 354 (369)
T 3rfy_A 345 -----GDVIESIQVV 354 (369)
T ss_dssp -----TCEEEEEEEE
T ss_pred -----CCceEEEEEe
Confidence 3456666665
No 73
>2nnz_A Hypothetical protein; beta-barrel, structural genomics, ontario centre for structu proteomics, OCSP, unknown function; NMR {Archaeoglobus fulgidus}
Probab=91.52 E-value=1.4 Score=37.90 Aligned_cols=109 Identities=17% Similarity=0.127 Sum_probs=65.7
Q ss_pred eeeEEEEeeeeEEEEEcCCCChhhHHhHHHhhcCCCCcccCCCEEEeeeCCeEEEeCcCCCCCCCCCcccCCCcccCCCC
Q psy443 118 LANAIHWYRKGFKGRLRSDVVPKTAENFRALCTGEKGFGFKDSTFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKFEDENF 197 (403)
Q Consensus 118 ~~v~~~T~~G~i~ieL~~d~aP~~~~nF~~L~~g~~g~~Y~~~~f~Rv~~~~~iqgGd~~~~~g~g~~~~~~~~~~~e~~ 197 (403)
|.+.|.-.-..+.++|+.+.||+||+.|+++-- +... +.+- .+..+. +... . .... |+.
T Consensus 30 ~~I~i~~~~~~~~a~L~D~~aP~Ta~~f~~~LP------l~~~-~~~~-g~E~y~--~lp~--~--------l~~~-en~ 88 (153)
T 2nnz_A 30 MRLRIRFESAECEVELYEEWAPETVRAIADALP------IKST-ANRW-GDEIYF--TTQV--A--------VEKE-ENS 88 (153)
T ss_dssp CCEEEEETTEEEEECCCTTSCHHHHHHHHHTCS------EEEE-EEEE-TTEEEE--CCSC--C--------CCCS-SCC
T ss_pred eEEEEEECCEEEEEEEcCCCCHHHHHHHHHhCC------cEEE-HHhh-CCcEEE--ECCC--C--------CCCC-CCC
Confidence 677777677789999999999999999999861 2222 1111 122221 1100 0 0111 222
Q ss_pred ccCCCccceeeecccCCCCCcceeEEEeccCcCCC------CceeEEEeEeecccccccccc
Q psy443 198 TLKHTGPGILSMANAGPNTNGSQFFITTVKTAWLD------NRHVVFGSVVEGLDVVKKLES 253 (403)
Q Consensus 198 ~~~h~~~G~ls~a~~~~~~~~SqFfI~l~~~~~Ld------~~~~VFGrVieG~dvl~~i~~ 253 (403)
. ....+|.|++-..+.+ +.|-+++.|... ..-.+||+|.+|.+.|.++..
T Consensus 89 ~-~~~~~GDI~Yy~pg~~-----LaIFYg~~p~s~~e~~~as~~~~lG~I~~gle~L~~~~~ 144 (153)
T 2nnz_A 89 K-DVVELGDVAYWIPGKA-----ICLFFGKTPISDDKIRPASAVNVIGRIVNSMEGLKGVAD 144 (153)
T ss_dssp B-CCCCTTEEEEETTTTE-----EEEESSCCTTCTTSCCCCSSEEEEEECCSCCCCGGGCCS
T ss_pred c-ccCCCCeEEEeCCCCE-----EEEEECCccccccccccccccEEEEEEccCHHHHhhCCC
Confidence 2 2345888888765443 777777764332 224899999999888777643
No 74
>3kop_A Uncharacterized protein; protein with A cyclophilin-like fold, structural genomics, J center for structural genomics, JCSG; 1.90A {Arthrobacter SP}
Probab=85.41 E-value=1.9 Score=37.88 Aligned_cols=105 Identities=22% Similarity=0.237 Sum_probs=59.2
Q ss_pred EEEEEcCCCChhhHHhHHHhhcCCCCcccCCCEEEeeeCCe--EEEeCcCCCCCCCCCcccCCCcccCCCCccCCCccce
Q psy443 129 FKGRLRSDVVPKTAENFRALCTGEKGFGFKDSTFHRVIPNF--MCQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGI 206 (403)
Q Consensus 129 i~ieL~~d~aP~~~~nF~~L~~g~~g~~Y~~~~f~Rv~~~~--~iqgGd~~~~~g~g~~~~~~~~~~~e~~~~~h~~~G~ 206 (403)
++.+|..|.||+||+.|.++- . |.+..+|-..-+. ++--|++.. ...+.|+...... +|-
T Consensus 35 ~~A~Lldd~APkTcaA~~~~L-P-----~~~~viHarwSGeeVy~~lp~f~~-----------~~~g~EN~T~~P~-pGD 96 (188)
T 3kop_A 35 CKALLLDDVAPRTSKAVWDAL-P-----QSSQVFHGKYARNEIYNLVPAFAP-----------KEPGAENTTVTPI-PGD 96 (188)
T ss_dssp EEEEECTTTSHHHHHHHHHHC-C-----EEEECEECSSSSSEEEEEEECCSS-----------SCCCSCSEESSCC-TTE
T ss_pred EEEEEccccChHHHHHHHHhC-C-----CCcceEEEEEecceEEEECCcccc-----------cCCCcCCCCCCCC-CCc
Confidence 788999999999999999976 1 4444444333332 222222211 1233444444444 777
Q ss_pred eeec---c---c----C--------CCCCcceeEEEeccCcC-CCCc-----eeEEEeEeecccccccc
Q psy443 207 LSMA---N---A----G--------PNTNGSQFFITTVKTAW-LDNR-----HVVFGSVVEGLDVVKKL 251 (403)
Q Consensus 207 ls~a---~---~----~--------~~~~~SqFfI~l~~~~~-Ld~~-----~~VFGrVieG~dvl~~i 251 (403)
|++- . . + ......++.|-++.+-. +.++ -.+|++|++|.|-+...
T Consensus 97 Il~f~f~p~~lG~~~yGy~~~~~~~~~~~~~dl~ifYG~~~~l~~~~~GwlpGN~F~TIveGle~la~~ 165 (188)
T 3kop_A 97 VCYFTFTSNDLKTPSHGYEADSGTDEVQTIVDLAVFYGRNNLLLNGDTGWVPGNVFATIVEGLDEMAAA 165 (188)
T ss_dssp EEEEEEEHHHHSSGGGCC--------CCEEEEEEEECSSSCCCEETTTEECCEEEEEEEEESHHHHHHH
T ss_pred EEEEecCCcccCCccccccccccccCCCcceEEEEEecccccccccccceecCcEEEEEecCHHHHHHH
Confidence 7763 1 1 1 01112466666666542 2322 27999999998766554
No 75
>3kop_A Uncharacterized protein; protein with A cyclophilin-like fold, structural genomics, J center for structural genomics, JCSG; 1.90A {Arthrobacter SP}
Probab=71.74 E-value=20 Score=31.51 Aligned_cols=105 Identities=22% Similarity=0.246 Sum_probs=59.8
Q ss_pred eeeeccccCCcchhhHHHhhcCCCCCccCCceEEeecCC--eEEEeCcCCCCCCCCCcccCCCCCCCCCCCCCCCCCcEE
Q psy443 264 KIVLRSDVVPKTAENFRALCTGEKGFGFKDSTFHRVIPN--FMCQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGIL 341 (403)
Q Consensus 264 ~I~L~~d~aP~t~enF~~L~~g~~g~~Y~g~~f~Rvi~~--f~iqgGd~~~~~g~gg~~~~g~~~~~e~~~~~h~~~G~l 341 (403)
..+|..+.+|+||+.|.++- . |.+-.+|-..-+ .|+--++..- .....||.+.. ..+|-|
T Consensus 36 ~A~Lldd~APkTcaA~~~~L---P---~~~~viHarwSGeeVy~~lp~f~~-----------~~~g~EN~T~~-P~pGDI 97 (188)
T 3kop_A 36 KALLLDDVAPRTSKAVWDAL---P---QSSQVFHGKYARNEIYNLVPAFAP-----------KEPGAENTTVT-PIPGDV 97 (188)
T ss_dssp EEEECTTTSHHHHHHHHHHC---C---EEEECEECSSSSSEEEEEEECCSS-----------SCCCSCSEESS-CCTTEE
T ss_pred EEEEccccChHHHHHHHHhC---C---CCcceEEEEEecceEEEECCcccc-----------cCCCcCCCCCC-CCCCcE
Confidence 34899999999999999986 1 444455544333 2333333210 11233444333 336766
Q ss_pred EEe---c---C----C--------CCCCcceEEEEecCCCC-CCCC-----ceEEEEEEecHHHHHHHH
Q psy443 342 SMA---N---A----G--------PNTNGSQFFITTVKTAW-LDNR-----HVVFGSVVEGLDVVKKLE 386 (403)
Q Consensus 342 sma---~---~----g--------~~s~gSqFfItl~~~~~-Ld~~-----~~vfG~VieG~dvl~~i~ 386 (403)
++= . . | ..+....+-|-.+.+.. +.++ -.+|++|+||.|-|.++-
T Consensus 98 l~f~f~p~~lG~~~yGy~~~~~~~~~~~~~dl~ifYG~~~~l~~~~~GwlpGN~F~TIveGle~la~~c 166 (188)
T 3kop_A 98 CYFTFTSNDLKTPSHGYEADSGTDEVQTIVDLAVFYGRNNLLLNGDTGWVPGNVFATIVEGLDEMAAAC 166 (188)
T ss_dssp EEEEEEHHHHSSGGGCC--------CCEEEEEEEECSSSCCCEETTTEECCEEEEEEEEESHHHHHHHH
T ss_pred EEEecCCcccCCccccccccccccCCCcceEEEEEecccccccccccceecCcEEEEEecCHHHHHHHH
Confidence 652 1 0 1 11223467777776553 2333 368999999999887763
No 76
>1zx8_A Hypothetical protein TM1367; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: 1PE; 1.90A {Thermotoga maritima} SCOP: b.62.1.3 PDB: 2ka0_A
Probab=68.43 E-value=37 Score=28.34 Aligned_cols=104 Identities=16% Similarity=0.118 Sum_probs=61.6
Q ss_pred eeeEEEEeeeeEEEEEcCCCChhhHHhHHHhh--cCCCCcccCCCEEEeeeCCeEEEeCcCCCCCCCCCcccCCCccc-C
Q psy443 118 LANAIHWYRKGFKGRLRSDVVPKTAENFRALC--TGEKGFGFKDSTFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKFE-D 194 (403)
Q Consensus 118 ~~v~~~T~~G~i~ieL~~d~aP~~~~nF~~L~--~g~~g~~Y~~~~f~Rv~~~~~iqgGd~~~~~g~g~~~~~~~~~~-~ 194 (403)
|+|.+-.....+..+|+. .|.|++.|.++- ++.... |. ..++--.|-. .+ +
T Consensus 13 ~~~~~~~~~~~v~a~L~D--np~Ta~~~~~~LPl~~~~~~-~g-~E~y~~~p~~----------------------l~~~ 66 (136)
T 1zx8_A 13 MRVELLFESGKCVIDLNE--EYEVVKLLKEKIPFESVVNT-WG-EEIYFSTPVN----------------------VQKM 66 (136)
T ss_dssp EEEEEECSSCEEEEEEET--TSHHHHHHHHHCSEEEECEE-SS-SEEEEECSCC----------------------CCCC
T ss_pred eEEEEeeCCcEEEEEEcC--CHHHHHHHHHHCCcEEEHHH-hC-CcEEEECCcc----------------------CCCC
Confidence 677777777889999964 488999999885 111111 32 2222111111 01 0
Q ss_pred CCCccCCCccceeeecccCCCCCcceeEEEeccCcCCCC------ceeEEEeEeecccccccccc
Q psy443 195 ENFTLKHTGPGILSMANAGPNTNGSQFFITTVKTAWLDN------RHVVFGSVVEGLDVVKKLES 253 (403)
Q Consensus 195 e~~~~~h~~~G~ls~a~~~~~~~~SqFfI~l~~~~~Ld~------~~~VFGrVieG~dvl~~i~~ 253 (403)
++.. ....+|.|+.-..+.+ +.|-+++.|...+ .-.++|||.+|++.+..+..
T Consensus 67 e~~~-~~~~~GDIaYw~pgg~-----LaIFyg~~p~s~~e~~~a~~v~~lGrI~~~l~~l~~v~~ 125 (136)
T 1zx8_A 67 ENPR-EVVEIGDVGYWPPGKA-----LCLFFGKTPMSDDKIQPASAVNVIGKIVEGLEDLKKIKD 125 (136)
T ss_dssp SSEE-SSBCTTEEEEEGGGTE-----EEEESSCCTTCSSSBCCSSCEEEEEEEEECGGGGGGCCT
T ss_pred CCCC-ccCCCCcEEEeCCCCE-----EEEEeCCCccccCccccCcCcEEEEEEccCHHHHhhCCC
Confidence 1111 2234788888666543 7777777654432 34899999999888766543
No 77
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=63.22 E-value=4.2 Score=35.46 Aligned_cols=47 Identities=6% Similarity=0.094 Sum_probs=22.0
Q ss_pred hHHHHHHhhhhcceecccccccchhhhhhhhcC----CcchhHHHHHHHHH
Q psy443 38 SLANAIHWYRKGFKYKVSLSTSGNIEVMVIRNK----NDDRERATQMIEKA 84 (403)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~e~~l~ia~~~ 84 (403)
..++|++||+||.+...+..+-.|++.++..+. +.+.+.+.++.+.+
T Consensus 144 d~~~A~~~~~~A~~~~~~~~a~~~Lg~~y~~g~gg~~~~d~~~A~~~~~~A 194 (212)
T 3rjv_A 144 DDVKASEYFKGSSSLSRTGYAEYWAGMMFQQGEKGFIEPNKQKALHWLNVS 194 (212)
T ss_dssp CHHHHHHHHHHHHHTSCTTHHHHHHHHHHHHCBTTTBCCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHH
Confidence 344555555555555333444455555544432 22444444444444
No 78
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=56.88 E-value=5.1 Score=32.61 Aligned_cols=44 Identities=18% Similarity=0.126 Sum_probs=24.3
Q ss_pred HHHhhhhcceecccccccchhhhhhhhcC--CcchhHHHHHHHHHHH
Q psy443 42 AIHWYRKGFKYKVSLSTSGNIEVMVIRNK--NDDRERATQMIEKALE 86 (403)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~e~~l~ia~~~~~ 86 (403)
|++||+||-+. -+..+-.|++.++..+. +.+.+.+.++.+.+++
T Consensus 44 A~~~~~~Aa~~-g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~ 89 (138)
T 1klx_A 44 LFQYLSKACEL-NSGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACG 89 (138)
T ss_dssp HHHHHHHHHHT-TCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcC-CCHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHc
Confidence 66666666665 24455556666665543 3445555555555543
No 79
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=56.28 E-value=6.1 Score=34.37 Aligned_cols=52 Identities=12% Similarity=0.145 Sum_probs=39.6
Q ss_pred hhhHHHHHHhhhhcceeccc---ccccchhhhhhhhcC--CcchhHHHHHHHHHHHh
Q psy443 36 KQSLANAIHWYRKGFKYKVS---LSTSGNIEVMVIRNK--NDDRERATQMIEKALET 87 (403)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~--~~~~e~~l~ia~~~~~~ 87 (403)
.+..++|++||+||.+..++ ..+-.||+.++..+. +.+.+.+.++...+++.
T Consensus 102 ~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~ 158 (212)
T 3rjv_A 102 ATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL 158 (212)
T ss_dssp SCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT
T ss_pred ccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc
Confidence 35678999999999999885 677888888888755 44677777777777544
No 80
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=48.83 E-value=9.2 Score=30.97 Aligned_cols=50 Identities=20% Similarity=0.208 Sum_probs=30.5
Q ss_pred hhhHHHHHHhhhhcceecccccccchhhhhhhhcC--CcchhHHHHHHHHHHH
Q psy443 36 KQSLANAIHWYRKGFKYKVSLSTSGNIEVMVIRNK--NDDRERATQMIEKALE 86 (403)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~e~~l~ia~~~~~ 86 (403)
....++|++||+||-+. -+..+-.|++.++..+. +.+.+.+.++.+.+++
T Consensus 74 ~~d~~~A~~~~~~Aa~~-g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~ 125 (138)
T 1klx_A 74 KKDLRKAAQYYSKACGL-NDQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACR 125 (138)
T ss_dssp CCCHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHcC-CCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHH
Confidence 44566777777777765 34555666676666653 3456666666665544
No 81
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=40.40 E-value=15 Score=28.92 Aligned_cols=50 Identities=24% Similarity=0.220 Sum_probs=34.2
Q ss_pred hhhHHHHHHhhhhcceecccccccc-hhhhhhhhcCCcchhHHHHHHHHHHHh
Q psy443 36 KQSLANAIHWYRKGFKYKVSLSTSG-NIEVMVIRNKNDDRERATQMIEKALET 87 (403)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~e~~l~ia~~~~~~ 87 (403)
....++|+.+|.||.++.|+..... |++.+++.-. +-+.+.+....+++-
T Consensus 21 ~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~--~~~~A~~~~~~al~~ 71 (127)
T 4gcn_A 21 QKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEK--KFAECVQFCEKAVEV 71 (127)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhh--hHHHHHHHHHHHHHh
Confidence 4457899999999999999865554 4566655543 356666666655543
No 82
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=32.84 E-value=9.9 Score=37.49 Aligned_cols=66 Identities=14% Similarity=0.180 Sum_probs=23.7
Q ss_pred CCCEEEeeceEeeeeeecccccchhhHHHHHHhhhhcceecccccccchhhhhhhhcCC---cchhHHHHHHHHHHH
Q psy443 13 IPDMLCLCGRIYKDKFVESQYKDKQSLANAIHWYRKGFKYKVSLSTSGNIEVMVIRNKN---DDRERATQMIEKALE 86 (403)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~e~~l~ia~~~~~ 86 (403)
-++.+...|.+|... .+.+..++|+.||+|+.+. +..+-.|+..++..... .+.+++.++.+.+++
T Consensus 34 ~~~A~~~Lg~~y~~~------g~~~d~~~A~~~~~~A~~~--~~~A~~~Lg~~~~~~~~~~~~~~~~A~~~~~~Aa~ 102 (452)
T 3e4b_A 34 YSEAQVGLADIQVGT------RDPAQIKQAEATYRAAADT--SPRAQARLGRLLAAKPGATEAEHHEAESLLKKAFA 102 (452)
T ss_dssp CCTGGGTCC------------------------------------CHHHHHHHHHTC--CCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcc------CCCCCHHHHHHHHHHHHhC--CHHHHHHHHHHHHhCCCCCCcCHHHHHHHHHHHHH
Confidence 366677889998431 2334668999999999988 55666788775555442 356667766666654
No 83
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=31.35 E-value=20 Score=25.17 Aligned_cols=49 Identities=20% Similarity=0.297 Sum_probs=31.1
Q ss_pred chhhHHHHHHhhhhcceeccccc-ccchhhhhhhhcCCcchhHHHHHHHHHH
Q psy443 35 DKQSLANAIHWYRKGFKYKVSLS-TSGNIEVMVIRNKNDDRERATQMIEKAL 85 (403)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~e~~l~ia~~~~ 85 (403)
.....++|+.||+++.++.|... +-.|++.+++... +.+.+.+....++
T Consensus 21 ~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~--~~~~A~~~~~~a~ 70 (91)
T 1na3_A 21 KQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQG--DYDEAIEYYQKAL 70 (91)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT--CHHHHHHHHHHHH
T ss_pred HccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHh--hHHHHHHHHHHHH
Confidence 34567899999999999988643 2345555555433 3455555555443
No 84
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=27.84 E-value=30 Score=30.42 Aligned_cols=48 Identities=13% Similarity=0.198 Sum_probs=27.2
Q ss_pred hhHHHHHHhhhhcceecccccccchhhhhhhhcC--CcchhHHHHHHHHHH
Q psy443 37 QSLANAIHWYRKGFKYKVSLSTSGNIEVMVIRNK--NDDRERATQMIEKAL 85 (403)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~e~~l~ia~~~~ 85 (403)
...++|++||+|+.+.. +..+-.|++.++..+. ..+.+.+.+..+.++
T Consensus 128 ~~~~~A~~~~~~a~~~~-~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~ 177 (273)
T 1ouv_A 128 RDFKKAVEYFTKACDLN-DGDGCTILGSLYDAGRGTPKDLKKALASYDKAC 177 (273)
T ss_dssp CCHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhcC-cHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHH
Confidence 34566777777777665 3344456666665533 344555555555554
No 85
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=27.53 E-value=29 Score=25.76 Aligned_cols=50 Identities=8% Similarity=0.119 Sum_probs=32.6
Q ss_pred chhhHHHHHHhhhhcceeccccccc-chhhhhhhhcCCcchhHHHHHHHHHHH
Q psy443 35 DKQSLANAIHWYRKGFKYKVSLSTS-GNIEVMVIRNKNDDRERATQMIEKALE 86 (403)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~e~~l~ia~~~~~ 86 (403)
.....++|+.+|+++.++.|+.... .|++.++.... +.+.+.+..+.+++
T Consensus 19 ~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g--~~~~A~~~~~~al~ 69 (100)
T 3ma5_A 19 KHDNASRALALFEELVETDPDYVGTYYHLGKLYERLD--RTDDAIDTYAQGIE 69 (100)
T ss_dssp HTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTT--CHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcC--CHHHHHHHHHHHHh
Confidence 3456789999999999999985544 34455554433 34555555555543
No 86
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=26.44 E-value=20 Score=31.73 Aligned_cols=30 Identities=17% Similarity=0.169 Sum_probs=14.1
Q ss_pred hHHHHHHhhhhcceecccccccchhhhhhhh
Q psy443 38 SLANAIHWYRKGFKYKVSLSTSGNIEVMVIR 68 (403)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (403)
..++|+.||+|+.+..| ..+-.|++.++..
T Consensus 201 ~~~~A~~~~~~a~~~~~-~~a~~~l~~~~~~ 230 (273)
T 1ouv_A 201 NFKEALARYSKACELEN-GGGCFNLGAMQYN 230 (273)
T ss_dssp CHHHHHHHHHHHHHTTC-HHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHhCCC-HHHHHHHHHHHHc
Confidence 34555555555555543 3333444444443
No 87
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=25.88 E-value=29 Score=26.40 Aligned_cols=20 Identities=5% Similarity=0.184 Sum_probs=16.1
Q ss_pred chhhHHHHHHhhhhcceecc
Q psy443 35 DKQSLANAIHWYRKGFKYKV 54 (403)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~ 54 (403)
+.+.-++|+.||++|++..+
T Consensus 17 ~~~~y~~A~~W~~~Al~~~~ 36 (104)
T 2v5f_A 17 TEADYYHTELWMEQALRQLD 36 (104)
T ss_dssp HTTCHHHHHHHHHHHHHHHH
T ss_pred HccchHHHHHHHHHHHHhhh
Confidence 44567899999999998754
No 88
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=25.74 E-value=7.4 Score=38.70 Aligned_cols=71 Identities=11% Similarity=0.050 Sum_probs=49.5
Q ss_pred CCCEEEeeceEeeeeeecccccchhhHHHHHHhhhhcceecc----cccccchhhhhhhhcCCcchhHHHHHHHHHHH
Q psy443 13 IPDMLCLCGRIYKDKFVESQYKDKQSLANAIHWYRKGFKYKV----SLSTSGNIEVMVIRNKNDDRERATQMIEKALE 86 (403)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~e~~l~ia~~~~~ 86 (403)
.++.+...|.+|..+|+..+- +....++|+.+|++|.++.| +..+-.|++.++.... +.+.+.+..+.+++
T Consensus 212 ~~~~~~~lg~~~~~~~~~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~lg~~~~~~g--~~~~A~~~~~~al~ 286 (474)
T 4abn_A 212 DGRSWYILGNAYLSLYFNTGQ-NPKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEE--SYGEALEGFSQAAA 286 (474)
T ss_dssp CHHHHHHHHHHHHHHHHHTTC-CHHHHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHcC--CHHHHHHHHHHHHH
Confidence 356677788888887666554 67889999999999999998 3334455666665543 45666665555543
No 89
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=25.27 E-value=40 Score=32.99 Aligned_cols=50 Identities=22% Similarity=0.369 Sum_probs=31.5
Q ss_pred hhhHHHHHHhhhhcceecccccccchhhhhhhhcC--CcchhHHHHHHHHHHH
Q psy443 36 KQSLANAIHWYRKGFKYKVSLSTSGNIEVMVIRNK--NDDRERATQMIEKALE 86 (403)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~e~~l~ia~~~~~ 86 (403)
.+..++|++||+|+.+. .+..+-.|++.++..+. +.+.+.+.++.+.+++
T Consensus 344 ~~~~~~A~~~~~~a~~~-~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~ 395 (490)
T 2xm6_A 344 EEEHKKAVEWFRKAAAK-GEKAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAE 395 (490)
T ss_dssp HHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHC-CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHh
Confidence 34567777777777776 34555666766666643 3456666666666654
No 90
>3eab_A Spastin; spastin, MIT, ESCRT, alternative splicing, ATP- binding, cytoplasm, disease mutation, hereditary spastic paraplegia, nucleotide-binding; 2.50A {Homo sapiens}
Probab=25.17 E-value=11 Score=29.24 Aligned_cols=24 Identities=25% Similarity=0.569 Sum_probs=17.1
Q ss_pred hhHHHHHHhhhhcceecccccccchhh
Q psy443 37 QSLANAIHWYRKGFKYKVSLSTSGNIE 63 (403)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 63 (403)
...++|+.||+||.+ -|-.||++-
T Consensus 33 G~k~~A~~~YkkGi~---eL~~Gi~V~ 56 (89)
T 3eab_A 33 GQKEQAVEWYKKGIE---ELEKGIAVI 56 (89)
T ss_dssp SSGGGSHHHHHHHHH---HHHHHHHSC
T ss_pred CCHHHHHHHHHHHHH---HHHhhcCCc
Confidence 347899999999974 345566653
No 91
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=24.82 E-value=27 Score=25.16 Aligned_cols=17 Identities=12% Similarity=0.114 Sum_probs=8.7
Q ss_pred HHHHHHhhhhcceeccc
Q psy443 39 LANAIHWYRKGFKYKVS 55 (403)
Q Consensus 39 ~~~~~~~~~~~~~~~~~ 55 (403)
.++|+.+|.++.++.|.
T Consensus 56 ~~~A~~~~~~a~~~~~~ 72 (112)
T 2kck_A 56 YEEAVDCYNYVINVIED 72 (112)
T ss_dssp HHHHHHHHHHHHHTSCC
T ss_pred HHHHHHHHHHHHHhCcc
Confidence 44555555555555444
No 92
>2k9u_B Filamin-binding LIM protein 1; cytoskeletal complex, alternative splicing, cell adhesion, cell junction, cell shape, cytoplasm, cytoskeleton; NMR {Homo sapiens}
Probab=24.05 E-value=51 Score=19.22 Aligned_cols=21 Identities=29% Similarity=0.282 Sum_probs=13.1
Q ss_pred EecCCCCCCcceEEEEecCCC
Q psy443 343 MANAGPNTNGSQFFITTVKTA 363 (403)
Q Consensus 343 ma~~g~~s~gSqFfItl~~~~ 363 (403)
||......-.|..||||.+..
T Consensus 1 ma~kpeKR~aSSvFITLapp~ 21 (26)
T 2k9u_B 1 MASKPEKRVASSVFITLAPPR 21 (26)
T ss_dssp CCCCSSSSCEEEEEEEECCSS
T ss_pred CCCcchhheeeeEEEEecCcc
Confidence 444433444678999998643
No 93
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=22.30 E-value=54 Score=32.00 Aligned_cols=48 Identities=10% Similarity=0.037 Sum_probs=33.4
Q ss_pred hhHHHHHHhhhhcceecccccccchhhhhhhhcC--CcchhHHHHHHHHHHH
Q psy443 37 QSLANAIHWYRKGFKYKVSLSTSGNIEVMVIRNK--NDDRERATQMIEKALE 86 (403)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~e~~l~ia~~~~~ 86 (403)
...++|++||+||- +-+..+-.|++.++..+. +.+.+.+.++.+.+++
T Consensus 301 ~d~~~A~~~~~~Aa--~g~~~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~ 350 (452)
T 3e4b_A 301 ADAKAAEAHFEKAV--GREVAADYYLGQIYRRGYLGKVYPQKALDHLLTAAR 350 (452)
T ss_dssp CCHHHHHHHHHTTT--TTCHHHHHHHHHHHHTTTTSSCCHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHh--CCCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHh
Confidence 35678888888888 556666777777777753 4466777777666654
No 94
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=20.56 E-value=49 Score=28.15 Aligned_cols=49 Identities=12% Similarity=0.103 Sum_probs=32.5
Q ss_pred hhhHHHHHHhhhhcceeccc-------cc------ccchhhhhhhhcCCcchhHHHHHHHHHHH
Q psy443 36 KQSLANAIHWYRKGFKYKVS-------LS------TSGNIEVMVIRNKNDDRERATQMIEKALE 86 (403)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~-------~~------~~~~~~~~~~~~~~~~~e~~l~ia~~~~~ 86 (403)
....+.|+.+|+||.++.|+ .+ +=.|++..|..-. +.+.++.-...+++
T Consensus 24 ~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lg--r~~eAl~~~~kAL~ 85 (159)
T 2hr2_A 24 AGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLR--SFDEALHSADKALH 85 (159)
T ss_dssp HTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCC--CHHHHHHHHHHHHH
Confidence 45578899999999999999 22 3356654444333 35666666666654
No 95
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.50 E-value=39 Score=27.40 Aligned_cols=41 Identities=22% Similarity=0.238 Sum_probs=22.5
Q ss_pred hhHHHHHHhhhhcceecccccccchhhhhhhhcCCcchhHHHHH
Q psy443 37 QSLANAIHWYRKGFKYKVSLSTSGNIEVMVIRNKNDDRERATQM 80 (403)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~i 80 (403)
..-++|+.||+||.+- |-.|+++-+---.+.....+.+.++
T Consensus 36 g~k~~Al~lYk~GI~e---Le~Gl~I~~~~~~~~g~~we~Ar~l 76 (116)
T 2dl1_A 36 GQKEEAKNYYKQGIGH---LLRGISISSKESEHTGPGWESARQM 76 (116)
T ss_dssp TCHHHHHHHHHHHHHH---HHHHHSSCCCCTTCCCSHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH---HHHhccccccCCCCCChhHHHHHHH
Confidence 5668899999998752 3445554332212334444444443
Done!