BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4430
(84 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6NYU7|UPP_DANRE Uracil phosphoribosyltransferase homolog OS=Danio rerio GN=uprt
PE=2 SV=1
Length = 257
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 34/50 (68%), Positives = 43/50 (86%)
Query: 27 IRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIRSGEAMEQ 76
IRLV+EE LNQLP+S+ + TPTG Y G+K+E+GNCGVS++RSGEAMEQ
Sbjct: 92 IRLVVEEGLNQLPYSECTVTTPTGHKYEGVKFEKGNCGVSIMRSGEAMEQ 141
>sp|Q5ZIJ8|UPP_CHICK Uracil phosphoribosyltransferase homolog OS=Gallus gallus GN=UPRT
PE=2 SV=1
Length = 277
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 53/79 (67%), Gaps = 3/79 (3%)
Query: 1 MNVKVVRLQPFPEKPVA--GD-VLDLLETIRLVIEESLNQLPFSKMDIVTPTGATYHGLK 57
MN ++ LQ A GD V IRLV+EE LNQLP+++ + TPTG Y G+K
Sbjct: 83 MNDQIRELQTIIRDKTASRGDFVFSADRLIRLVVEERLNQLPYTECTVTTPTGYKYEGVK 142
Query: 58 YERGNCGVSVIRSGEAMEQ 76
+E+GNCGVS++RSGEAMEQ
Sbjct: 143 FEKGNCGVSIMRSGEAMEQ 161
>sp|B1AVZ0|UPP_MOUSE Uracil phosphoribosyltransferase homolog OS=Mus musculus GN=Uprt
PE=2 SV=1
Length = 310
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 33/50 (66%), Positives = 42/50 (84%)
Query: 27 IRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIRSGEAMEQ 76
IRLV+EE LNQLP+ + + TPTG Y G+K+E+GNCGVS++RSGEAMEQ
Sbjct: 145 IRLVVEEGLNQLPYKECMVTTPTGHKYEGVKFEKGNCGVSIMRSGEAMEQ 194
>sp|Q32LA4|UPP_BOVIN Uracil phosphoribosyltransferase homolog OS=Bos taurus GN=UPRT PE=2
SV=1
Length = 306
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 43/53 (81%)
Query: 27 IRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIRSGEAMEQVQR 79
IRLV+EE LNQLP+ + + TPTG Y G+K+E+GNCGVS++RSGEAMEQ R
Sbjct: 141 IRLVVEEGLNQLPYEECMVTTPTGFKYEGVKFEKGNCGVSIMRSGEAMEQGLR 193
>sp|Q96BW1|UPP_HUMAN Uracil phosphoribosyltransferase homolog OS=Homo sapiens GN=UPRT
PE=2 SV=1
Length = 309
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 33/50 (66%), Positives = 42/50 (84%)
Query: 27 IRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIRSGEAMEQ 76
IRLV+EE LNQLP+ + + TPTG Y G+K+E+GNCGVS++RSGEAMEQ
Sbjct: 144 IRLVVEEGLNQLPYKECMVTTPTGYKYEGVKFEKGNCGVSIMRSGEAMEQ 193
>sp|Q95KB0|UPP_MACFA Uracil phosphoribosyltransferase homolog OS=Macaca fascicularis
GN=UPRT PE=2 SV=1
Length = 309
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 33/50 (66%), Positives = 42/50 (84%)
Query: 27 IRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIRSGEAMEQ 76
IRLV+EE LNQLP+ + + TPTG Y G+K+E+GNCGVS++RSGEAMEQ
Sbjct: 144 IRLVVEEGLNQLPYKECMVTTPTGYKYEGVKFEKGNCGVSIMRSGEAMEQ 193
>sp|Q26998|UPP_TOXGO Uracil phosphoribosyltransferase OS=Toxoplasma gondii GN=uprt PE=1
SV=1
Length = 244
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 42/60 (70%), Gaps = 4/60 (6%)
Query: 27 IRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIRSGEAMEQ----VQRGPR 82
IRL+IEE+LN+LPF K ++ TP +YHG+ + CGVS++R+GE+ME V RG R
Sbjct: 70 IRLLIEEALNELPFEKKEVTTPLDVSYHGVSFYSKICGVSIVRAGESMESGLRAVCRGCR 129
>sp|Q9FKS0|UKL1_ARATH Uridine kinase-like protein 1, chloroplastic OS=Arabidopsis
thaliana GN=UKL1 PE=1 SV=1
Length = 486
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 38/54 (70%)
Query: 27 IRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIRSGEAMEQVQRG 80
IRLV+E L LPF++ +VTPTGA Y G+ + + CGVS+IRSGE+ME R
Sbjct: 309 IRLVVEHGLGHLPFTEKQVVTPTGAVYTGVDFCKKLCGVSIIRSGESMENALRA 362
>sp|Q9LK34|UKL2_ARATH Uridine kinase-like protein 2, chloroplastic OS=Arabidopsis
thaliana GN=UKL2 PE=1 SV=1
Length = 483
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 38/54 (70%)
Query: 27 IRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIRSGEAMEQVQRG 80
IRLV+E L LPF++ +VTPTG+ Y G+ + + CGVSVIRSGE+ME R
Sbjct: 309 IRLVVEHGLGHLPFTEKQVVTPTGSVYSGVDFCKKLCGVSVIRSGESMENALRA 362
>sp|Q8VYB2|UKL3_ARATH Uridine kinase-like protein 3 OS=Arabidopsis thaliana GN=UKL3 PE=1
SV=1
Length = 466
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 38/54 (70%)
Query: 27 IRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIRSGEAMEQVQRG 80
IRLV+E L LPF++ +VTPTG+ Y G+ + + CGVSVIRSGE+ME R
Sbjct: 291 IRLVVEHGLGHLPFTEKQVVTPTGSVYSGVDFCKKLCGVSVIRSGESMENALRA 344
>sp|O65583|UKL4_ARATH Uridine kinase-like protein 4 OS=Arabidopsis thaliana GN=UKL4 PE=1
SV=2
Length = 469
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 37/54 (68%)
Query: 27 IRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIRSGEAMEQVQRG 80
IRLV+E L LPF++ ++TPTG Y G+ + + CGVSVIRSGE+ME R
Sbjct: 294 IRLVVEHGLGHLPFTEKQVITPTGCVYSGVDFCKRLCGVSVIRSGESMENALRA 347
>sp|Q9LTY6|UKL5_ARATH Uridine kinase-like protein 5 OS=Arabidopsis thaliana GN=UKL5 PE=2
SV=1
Length = 465
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 37/54 (68%)
Query: 27 IRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIRSGEAMEQVQRG 80
IRLV+E L LPF++ I TPTG+ Y G+ + + CGVSVIRSGE+ME R
Sbjct: 275 IRLVVEHGLGHLPFTEKQITTPTGSVYTGVDFCKRLCGVSVIRSGESMENALRA 328
>sp|Q55GQ6|UPP_DICDI Uracil phosphoribosyltransferase OS=Dictyostelium discoideum
GN=uprt PE=3 SV=1
Length = 216
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 35/54 (64%)
Query: 27 IRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIRSGEAMEQVQRG 80
IRL+IEE L LPF + I TPTG Y G+ + CGVS++R+GE+ME R
Sbjct: 41 IRLLIEEGLYCLPFHETTITTPTGCEYQGVTFASKICGVSIVRAGESMEAGLRA 94
>sp|O13867|UPP1_SCHPO Uracil phosphoribosyltransferase 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC1B3.01c PE=3 SV=1
Length = 219
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 35/53 (66%)
Query: 27 IRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIRSGEAMEQVQR 79
IRL++EE LN LP S + T A Y G+ ++ CGVS++R+GE+MEQ R
Sbjct: 44 IRLIVEEGLNHLPVSSAKVTTAQNAEYEGVMFDGRICGVSIMRAGESMEQGLR 96
>sp|P18562|UPP_YEAST Uracil phosphoribosyltransferase OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=FUR1 PE=1 SV=2
Length = 216
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 34/53 (64%)
Query: 27 IRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIRSGEAMEQVQR 79
IRL++EE LN LP K + T T + G+ + CGVS++R+GE+MEQ R
Sbjct: 43 IRLLVEEGLNHLPVQKQIVETDTNENFEGVSFMGKICGVSIVRAGESMEQGLR 95
>sp|Q9HE15|UPP2_SCHPO Uracil phosphoribosyltransferase 2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC1399.04c PE=3 SV=1
Length = 220
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 36/49 (73%)
Query: 27 IRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIRSGEAME 75
I ++++E+L+ LP+ K I T +G TY G++ R CGVS++R+GE+ME
Sbjct: 45 INMLMQEALSALPYKKCLIKTSSGGTYTGVQPARDICGVSILRAGESME 93
>sp|Q55EL3|UCKA_DICDI Uridine-cytidine kinase A OS=Dictyostelium discoideum GN=udkA PE=3
SV=1
Length = 499
Score = 50.8 bits (120), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 33/51 (64%)
Query: 29 LVIEESLNQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIRSGEAMEQVQR 79
L+IEE+L LPF++ + TPTG+ YHG + C + V+R+G MEQ R
Sbjct: 329 LIIEEALTYLPFTEKIVTTPTGSLYHGEELNSRICALVVLRAGGCMEQPLR 379
>sp|A5H0J4|UPP_LACKL Uracil phosphoribosyltransferase OS=Lachancea kluyveri GN=FUR1
PE=3 SV=1
Length = 216
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 27 IRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIRSGEAMEQVQR 79
IRL++EE LN LP + + T T ++ G+ + CGVS++R+GE+MEQ R
Sbjct: 43 IRLLVEEGLNHLPVTPNTVETDTNQSFDGVSFLGKICGVSIVRAGESMEQGLR 95
>sp|Q91YL3|UCKL1_MOUSE Uridine-cytidine kinase-like 1 OS=Mus musculus GN=Uckl1 PE=1 SV=1
Length = 548
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 27 IRLVIEESLNQLPFSKMDIVTPTGATYHGLKYE-RGNCGVSVIRSGEAMEQVQRG 80
+RL+IE +L+ LPF + TP G Y G Y + GVS++R+GE ME R
Sbjct: 358 MRLLIEHALSFLPFQDCTVQTPQGQDYVGKCYAGKQITGVSILRAGETMEPALRA 412
>sp|Q9NWZ5|UCKL1_HUMAN Uridine-cytidine kinase-like 1 OS=Homo sapiens GN=UCKL1 PE=1 SV=2
Length = 548
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 27 IRLVIEESLNQLPFSKMDIVTPTGATYHGLKYE-RGNCGVSVIRSGEAMEQVQRG 80
+RL+IE +L+ LPF + TP G Y G Y + GVS++R+GE ME R
Sbjct: 358 MRLLIEHALSFLPFQDCVVQTPQGQDYAGKCYAGKQITGVSILRAGETMEPALRA 412
>sp|Q6L440|R1A3_SOLDE Putative late blight resistance protein homolog R1A-3 OS=Solanum
demissum GN=R1A-3 PE=5 SV=2
Length = 775
Score = 33.5 bits (75), Expect = 0.37, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 9/64 (14%)
Query: 16 VAGDVLDLLETIRLVIEESLNQLPFSKMDIVTPTGATYHGLKY-ERGNCGVSVIRSGEAM 74
VA D LE + L + L ++PF MDI++ LKY E NC SV++S + +
Sbjct: 642 VADDAFPNLEQLVLRGCKDLMEIPFCFMDILS--------LKYIELDNCNKSVVKSAKDI 693
Query: 75 EQVQ 78
E+ Q
Sbjct: 694 EEAQ 697
>sp|O74427|URK1_SCHPO Uridine kinase OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=urk1 PE=3 SV=1
Length = 454
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 36 NQLPFSKMDIVTPTGATYHGLKYERGNCGVSVIRSGEAME 75
+ L + K I G + GL+ + CGVSV+RSG +E
Sbjct: 294 DSLAYEKKTITLHNGNQWEGLQMAKELCGVSVLRSGGTLE 333
>sp|B0TH80|NUOD_HELMI NADH-quinone oxidoreductase subunit D OS=Heliobacterium
modesticaldum (strain ATCC 51547 / Ice1) GN=nuoD PE=3
SV=1
Length = 364
Score = 29.6 bits (65), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 6/48 (12%)
Query: 30 VIEESLNQLP----FSKM--DIVTPTGATYHGLKYERGNCGVSVIRSG 71
+IE++L+QLP +KM I P G YH ++ +G G V+ G
Sbjct: 269 IIEQALDQLPEGPIMAKMPKAIKPPVGEVYHRIENAKGEIGFYVVSDG 316
>sp|C3LLQ1|HUTI_VIBCM Imidazolonepropionase OS=Vibrio cholerae serotype O1 (strain M66-2)
GN=hutI PE=3 SV=1
Length = 402
Score = 29.6 bits (65), Expect = 6.3, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 6 VRLQPFPEKPVA---GDVLDLLETIRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERG- 61
+RLQ P + +A G +L + R EE+L +L ++D + +G T +K G
Sbjct: 81 LRLQGVPYQTIAAQGGGILSTVNATRKASEEALIELALPRLDGLLRSGVTSVEVKSGYGL 140
Query: 62 --NCGVSVIRSGEAMEQVQR 79
+ ++R+ +A+EQ +R
Sbjct: 141 TLKDELKMLRAAKALEQHRR 160
>sp|Q9KSQ1|HUTI_VIBCH Imidazolonepropionase OS=Vibrio cholerae serotype O1 (strain ATCC
39315 / El Tor Inaba N16961) GN=hutI PE=3 SV=1
Length = 402
Score = 29.6 bits (65), Expect = 6.3, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 6 VRLQPFPEKPVA---GDVLDLLETIRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERG- 61
+RLQ P + +A G +L + R EE+L +L ++D + +G T +K G
Sbjct: 81 LRLQGVPYQTIAAQGGGILSTVNATRKASEEALIELALPRLDGLLRSGVTSVEVKSGYGL 140
Query: 62 --NCGVSVIRSGEAMEQVQR 79
+ ++R+ +A+EQ +R
Sbjct: 141 TLKDELKMLRAAKALEQHRR 160
>sp|A5F1X8|HUTI_VIBC3 Imidazolonepropionase OS=Vibrio cholerae serotype O1 (strain ATCC
39541 / Ogawa 395 / O395) GN=hutI PE=3 SV=1
Length = 402
Score = 29.6 bits (65), Expect = 6.3, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 6 VRLQPFPEKPVA---GDVLDLLETIRLVIEESLNQLPFSKMDIVTPTGATYHGLKYERG- 61
+RLQ P + +A G +L + R EE+L +L ++D + +G T +K G
Sbjct: 81 LRLQGVPYQTIAAQGGGILSTVNATRKASEEALIELALPRLDGLLRSGVTSVEVKSGYGL 140
Query: 62 --NCGVSVIRSGEAMEQVQR 79
+ ++R+ +A+EQ +R
Sbjct: 141 TLKDELKMLRAAKALEQHRR 160
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.138 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,261,431
Number of Sequences: 539616
Number of extensions: 1170169
Number of successful extensions: 2729
Number of sequences better than 100.0: 30
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 2701
Number of HSP's gapped (non-prelim): 30
length of query: 84
length of database: 191,569,459
effective HSP length: 55
effective length of query: 29
effective length of database: 161,890,579
effective search space: 4694826791
effective search space used: 4694826791
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)