BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4436
(171 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q86V88|MGDP1_HUMAN Magnesium-dependent phosphatase 1 OS=Homo sapiens GN=MDP1 PE=1 SV=1
Length = 176
Score = 161 bits (408), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 80/158 (50%), Positives = 109/158 (68%), Gaps = 1/158 (0%)
Query: 12 VKKFPKLAVFDLDHTLWPFHVYIDVIPPFKKIGD-KVLDAGGAIIKYYRDVPAILKYLKQ 70
+ + PKLAVFDLD+TLWPF V V PPF K D V D G ++ Y +VP +LK L+
Sbjct: 1 MARLPKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQDVRLYPEVPEVLKRLQS 60
Query: 71 NNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVF 130
AAASRT+E+ A+QL++LF+ ++F H+EI+PG K THF L++ TGI + M+F
Sbjct: 61 LGVPGAAASRTSEIEGANQLLELFDLFRYFVHREIYPGSKITHFERLQQKTGIPFSQMIF 120
Query: 131 FDDEERNSHDVSPLGVTCIHVKDGMSHSVLHKGLKQWA 168
FDDE RN DVS LGVTCIH+++GM+ L +GL+ +A
Sbjct: 121 FDDERRNIVDVSKLGVTCIHIQNGMNLQTLSQGLETFA 158
>sp|Q9D967|MGDP1_MOUSE Magnesium-dependent phosphatase 1 OS=Mus musculus GN=Mdp1 PE=1 SV=1
Length = 164
Score = 159 bits (402), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 81/158 (51%), Positives = 105/158 (66%), Gaps = 1/158 (0%)
Query: 12 VKKFPKLAVFDLDHTLWPFHVYIDVIPPFKKIGD-KVLDAGGAIIKYYRDVPAILKYLKQ 70
+ + PKLAVFDLD+TLWPF V V PPF K D V D G I+ Y +VP +L L+
Sbjct: 1 MTRLPKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQNIQLYPEVPEVLGRLQS 60
Query: 71 NNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVF 130
VAAASRT+E+ A+QL++LF+ ++F +EI+PG K THF L TG+ + MVF
Sbjct: 61 LGVPVAAASRTSEIQGANQLLELFDLGKYFIQREIYPGSKVTHFERLHHKTGVPFSQMVF 120
Query: 131 FDDEERNSHDVSPLGVTCIHVKDGMSHSVLHKGLKQWA 168
FDDE RN DV LGVTCIH++DGMS L +GL+ +A
Sbjct: 121 FDDENRNIIDVGRLGVTCIHIRDGMSLQTLTQGLETFA 158
>sp|O94279|MGDP1_SCHPO Putative magnesium-dependent phosphatase P8B7.31
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBP8B7.31 PE=1 SV=2
Length = 172
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 77/146 (52%), Gaps = 13/146 (8%)
Query: 14 KFPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDK---VLDAGGAIIKYYRDVPAILKYLKQ 70
+FPK VFDLD+TLWP + V PFK + ++D G I +Y D+ IL+ L+
Sbjct: 6 EFPKCVVFDLDYTLWPLWIDTHVTAPFKPSKNDPGVLIDKYGTEICFYSDITGILQELRN 65
Query: 71 NNCLVAAASRTTEMLRAHQLVDLFNWN---------QHFDHKEIFPGQKTTHFANLKKAT 121
+ ASRT A Q ++L + F + + +PG K HF + +
Sbjct: 66 QKVTLCVASRTCAPKYAKQALNLMKVPIDGSLKPAIEFFTYVKAWPGSKMDHFKEIHNES 125
Query: 122 GIEYKDMVFFDDEERNSHDVSPLGVT 147
GI+Y++MVFFDDE RN +V LGVT
Sbjct: 126 GIDYREMVFFDDESRN-REVERLGVT 150
>sp|P40081|MGDP1_YEAST Putative magnesium-dependent phosphatase YER134C OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YER134C PE=1
SV=1
Length = 178
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 75/160 (46%), Gaps = 24/160 (15%)
Query: 15 FPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDK------VLDAGGAIIKYYRDVPAILKYL 68
+P +A FDLD+T+WP + + PFK + ++ G + Y+D+P IL L
Sbjct: 4 YPDVAAFDLDYTIWPCYCDTHLHGPFKPVKSSNGEVLTIICRDGYELTIYKDIPRILGDL 63
Query: 69 KQNNCLVAAASRT------TEMLRAHQ---------LVDLFNWNQHFDHKEIFPGQKTTH 113
K N + ASRT E+L+ + L +LF+ Q + +I G
Sbjct: 64 KDNGVKLMTASRTWAPEIAQEILKIFKVKYAGVVTPLANLFDEFQWGERSKI--GHLRDG 121
Query: 114 FANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKD 153
+L + ++ K + FDDE RN +V GV ++V+D
Sbjct: 122 LKDLYNTSDLKSKKICLFDDESRNK-EVEKYGVKFVYVRD 160
>sp|Q8C569|F118B_MOUSE Protein FAM118B OS=Mus musculus GN=Fam118b PE=2 SV=1
Length = 351
Score = 37.4 bits (85), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 22 DLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRT 81
DL+H + +D FKK+ + +LD G +I Y D + +Y K+ C ++ R+
Sbjct: 271 DLEHFMLVRRGDVD---EFKKLRENMLDKGIKVISYGNDYADLPEYFKRLTCEISTRGRS 327
Query: 82 TEMLRAHQL 90
M R QL
Sbjct: 328 AGMAREGQL 336
>sp|Q5E977|F118B_BOVIN Protein FAM118B OS=Bos taurus GN=FAM118B PE=2 SV=1
Length = 351
Score = 36.2 bits (82), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 22 DLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRT 81
DL+H + +D FKK+ + +LD G +I Y D + +Y K+ C ++ R+
Sbjct: 271 DLEHFMLVRRGDVD---EFKKLRENMLDKGIKVISYGNDYADLPEYFKRLTCEISTRGRS 327
Query: 82 TEMLRAHQL 90
++R QL
Sbjct: 328 AGIVREGQL 336
>sp|Q9S586|GPH1_PSEAE Phosphoglycolate phosphatase 1 OS=Pseudomonas aeruginosa (strain
ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=gph1
PE=3 SV=1
Length = 272
Score = 35.0 bits (79), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 46/111 (41%), Gaps = 6/111 (5%)
Query: 53 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFD---HKEIFPGQ 109
A+ + Y V LK+LK+N +A + E A L+D ++F + P Q
Sbjct: 98 ALTEVYPGVVDTLKWLKRNGVEMALITNKPERFVA-PLLDEMKLGRYFRWIIGGDTLPQQ 156
Query: 110 KTTHFANL--KKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGMSHS 158
K A L K GIE +D +F D + GV C + G +H
Sbjct: 157 KPDPAALLFVMKMAGIEPEDALFVGDSRNDVLAAKAAGVRCAALTYGYNHG 207
>sp|Q9BPY3|F118B_HUMAN Protein FAM118B OS=Homo sapiens GN=FAM118B PE=1 SV=1
Length = 351
Score = 34.7 bits (78), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 22 DLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRT 81
DL+H + +D FKK+ + +LD G +I Y D + +Y K+ C ++ +
Sbjct: 271 DLEHFMLVRRGDVD---EFKKLRENMLDKGIKVISYGDDYADLPEYFKRLTCEISTRGTS 327
Query: 82 TEMLRAHQL 90
M+R QL
Sbjct: 328 AGMVREGQL 336
>sp|Q97Z83|PRIS_SULSO Probable DNA primase small subunit OS=Sulfolobus solfataricus
(strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) GN=priA
PE=1 SV=1
Length = 330
Score = 33.9 bits (76), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Query: 12 VKKFPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILK 66
VK+ P L F+ + TL PF Y + P+ I +VL G+IIK R +P +K
Sbjct: 260 VKRVPNLDDFEFNETLSPFTGYT-IFLPYITIETEVL---GSIIKLNRGIPIKIK 310
>sp|Q4R836|F118B_MACFA Protein FAM118B OS=Macaca fascicularis GN=FAM118B PE=2 SV=1
Length = 350
Score = 33.9 bits (76), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Query: 22 DLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRT 81
DL+H + +D FKK+ + +LD G +I Y D + +Y K+ C ++ R+
Sbjct: 271 DLEHFMLVRRGDVD---EFKKLRENMLDKGIKVISYGNDYADLPEYFKRLTCEISTRGRS 327
Query: 82 TEMLRAHQL 90
M+R QL
Sbjct: 328 G-MVREGQL 335
>sp|Q4QQT2|F118B_RAT Protein FAM118B OS=Rattus norvegicus GN=Fam118b PE=2 SV=1
Length = 350
Score = 33.1 bits (74), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Query: 22 DLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRT 81
DL+H + +D FKK+ + +LD G +I Y D + +Y K+ C ++ R+
Sbjct: 271 DLEHFMLVRRGDVD---EFKKLRENMLDKGIKVISYGNDYADLPEYFKRLTCEISTRGRS 327
Query: 82 TEMLRAHQL 90
M R QL
Sbjct: 328 G-MAREGQL 335
>sp|P0A8Y4|YIHX_SHIFL Alpha-D-glucose-1-phosphate phosphatase YihX OS=Shigella flexneri
GN=yihX PE=3 SV=1
Length = 199
Score = 33.1 bits (74), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 22/40 (55%)
Query: 114 FANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKD 153
+ ++ +A G D VFFDD N + LG+T I VKD
Sbjct: 147 YQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVKD 186
>sp|P0A8Y3|YIHX_ECOLI Alpha-D-glucose-1-phosphate phosphatase YihX OS=Escherichia coli
(strain K12) GN=yihX PE=1 SV=1
Length = 199
Score = 33.1 bits (74), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 22/40 (55%)
Query: 114 FANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKD 153
+ ++ +A G D VFFDD N + LG+T I VKD
Sbjct: 147 YQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVKD 186
>sp|Q47II9|GLGC_DECAR Glucose-1-phosphate adenylyltransferase OS=Dechloromonas aromatica
(strain RCB) GN=glgC PE=3 SV=1
Length = 440
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 59/144 (40%), Gaps = 23/144 (15%)
Query: 12 VKKFPKLAVFDLDHTLWPFHVYIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQN 71
K P+L V+D D WP Y + IPP K + D G A+ L
Sbjct: 301 TKVTPELNVYDRD---WPIWTYQEQIPPAKFVFDDEDRRGTAV-----------DSLIAG 346
Query: 72 NCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEY----KD 127
C+++ AS +L + V++ +W + + P A LK+ ++ +
Sbjct: 347 GCIISGASVKRSLLFSS--VNVHSWAS-VEDSVVLPDVDIGRHAVLKRCVIDKHCRIPEG 403
Query: 128 MVFFDD--EERNSHDVSPLGVTCI 149
MV D E+R VSP G+T +
Sbjct: 404 MVIGVDPEEDRKRFHVSPKGITLV 427
>sp|A1U2S9|ACSA_MARAV Acetyl-coenzyme A synthetase OS=Marinobacter aquaeolei (strain ATCC
700491 / DSM 11845 / VT8) GN=acsA PE=3 SV=1
Length = 649
Score = 31.6 bits (70), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 17/111 (15%)
Query: 25 HTLWPFHV-YIDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTE 83
+T W H ID I PF K+ + D IK++ D +L NCL R E
Sbjct: 36 NTFWGEHGKRIDWIKPFTKVKNSTYDYNNLSIKWFED--GVLN--ASANCL----DRHLE 87
Query: 84 MLRAHQLVDLFNWN-----QHFDHKEIFPGQKTTHFANLKKATGIEYKDMV 129
R Q +F + ++ ++E++ ++T FAN+ K G++ D+V
Sbjct: 88 Q-RGDQTAIIFEGDDPSVSRNVTYRELY--EETCKFANVLKDQGVKKGDVV 135
>sp|Q8NT41|MGTA_CORGL GDP-mannose-dependent alpha-mannosyltransferase OS=Corynebacterium
glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 /
LMG 3730 / NCIMB 10025) GN=mgtA PE=1 SV=1
Length = 413
Score = 31.2 bits (69), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 71 NNC--LVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHF 114
N C +A +S + + LR H + D+F+W + D K PG+++
Sbjct: 154 NMCQRTLAPSSMSIDELRDHGINDIFHWARGVDSKRFHPGKRSVAL 199
>sp|O94200|K6PF2_CANAX 6-phosphofructokinase subunit beta OS=Candida albicans GN=PFK2 PE=1
SV=1
Length = 946
Score = 31.2 bits (69), Expect = 3.8, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 55 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQH--FDHKEIFPGQ 109
I R+ A+ + + ++ L+ +S +++L H L D+FN H FD K PG
Sbjct: 783 INSLREAFAVEQGMTKSGKLIIKSSNASKVLTPHTLADIFNDECHGDFDTKTAIPGH 839
>sp|A1SZA2|ACSA_PSYIN Acetyl-coenzyme A synthetase OS=Psychromonas ingrahamii (strain 37)
GN=acsA PE=3 SV=1
Length = 649
Score = 30.8 bits (68), Expect = 4.9, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 44/96 (45%), Gaps = 6/96 (6%)
Query: 34 IDVIPPFKKIGDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDL 93
+D I P+ K+ + D+G IK++ D K NC+ + + + D
Sbjct: 46 LDWIKPYTKVKNSSFDSGHVSIKWFEDG----KLNVSANCIDRHLATKGDQVAILWEGDT 101
Query: 94 FNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMV 129
+ ++ +K++ Q+ FAN+ K+ G+ D+V
Sbjct: 102 ADKDEKITYKQLH--QRVCQFANVLKSQGVRKGDVV 135
>sp|Q6MNP6|NRDJ_BDEBA Vitamin B12-dependent ribonucleotide reductase OS=Bdellovibrio
bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529
/ HD100) GN=nrdJ PE=3 SV=1
Length = 764
Score = 30.4 bits (67), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 13/70 (18%)
Query: 42 KIGDKVLDAGGAIIKYYRD-VPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHF 100
+I ++ +DA A ++Y+ D AILKY+++NN +V A E L F
Sbjct: 595 QIVNQSVDAALASLQYFEDERQAILKYVEENNSVVGAPQMHPEDLPV------------F 642
Query: 101 DHKEIFPGQK 110
D PGQ+
Sbjct: 643 DTATAMPGQR 652
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.138 0.433
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,380,646
Number of Sequences: 539616
Number of extensions: 2881267
Number of successful extensions: 5669
Number of sequences better than 100.0: 23
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 5646
Number of HSP's gapped (non-prelim): 25
length of query: 171
length of database: 191,569,459
effective HSP length: 109
effective length of query: 62
effective length of database: 132,751,315
effective search space: 8230581530
effective search space used: 8230581530
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.6 bits)